BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (239 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P77601 Putative HTH-type transcriptional regulator ykgA... 501 e-141 UniRef50_B6ICR1 Putative transcription regulator n=1 Tax=Escheri... 150 5e-35 UniRef50_B5RA11 Putative transcriptional regulator n=35 Tax=Salm... 134 3e-30 UniRef50_B6ICR2 Putative transcription regulator n=1 Tax=Escheri... 126 7e-28 UniRef50_C2LM40 Right origin-binding protein n=2 Tax=Proteus mir... 121 2e-26 UniRef50_D1P487 Right origin-binding protein n=2 Tax=Providencia... 120 4e-26 UniRef50_B4EY53 Right origin-binding protein n=55 Tax=Enterobact... 118 1e-25 UniRef50_D2TW49 Right origin-binding protein n=1 Tax=Arsenophonu... 118 2e-25 UniRef50_A9MRK1 Putative uncharacterized protein n=1 Tax=Salmone... 118 2e-25 UniRef50_P0ACI1 Right origin-binding protein n=101 Tax=Enterobac... 117 3e-25 UniRef50_D0YAG4 Transcriptional regulator, AraC family n=6 Tax=K... 115 9e-25 UniRef50_C6C946 Transcriptional regulator, AraC family n=3 Tax=D... 115 1e-24 UniRef50_C4X304 Right origin-binding protein n=9 Tax=cellular or... 113 5e-24 UniRef50_B6XK96 Putative uncharacterized protein n=3 Tax=Enterob... 112 1e-23 UniRef50_B4EVW5 AraC-family transcriptional regulator n=3 Tax=Pr... 107 3e-22 UniRef50_P43463 HTH-type transcriptional activator aarP n=3 Tax=... 107 3e-22 UniRef50_P0A9E4 Regulatory protein soxS n=98 Tax=Proteobacteria ... 106 5e-22 UniRef50_Q2NSQ1 Putative right origin-binding protein n=1 Tax=So... 106 7e-22 UniRef50_Q6WFA3 Putative transcription factor Roh n=1 Tax=Entero... 106 8e-22 UniRef50_P28816 Transposon Tn10 tetD protein n=29 Tax=root RepID... 105 9e-22 UniRef50_Q49JG3 LdaA n=9 Tax=Enterobacteriaceae RepID=Q49JG3_ECOLX 104 2e-21 UniRef50_A8GJ26 Transcriptional regulator, AraC family n=2 Tax=S... 100 5e-20 UniRef50_B2K4J9 Transcriptional regulator, AraC family n=34 Tax=... 100 6e-20 UniRef50_C2LMQ2 Regulatory protein n=1 Tax=Proteus mirabilis ATC... 100 7e-20 UniRef50_C8QBQ6 Transcriptional regulator, AraC family n=1 Tax=P... 99 2e-19 UniRef50_B3IA10 LdaA n=1 Tax=Escherichia coli E22 RepID=B3IA10_E... 98 2e-19 UniRef50_C4UL45 Putative uncharacterized protein n=1 Tax=Yersini... 98 2e-19 UniRef50_C8QFY6 Transcriptional regulator, AraC family n=3 Tax=E... 98 3e-19 UniRef50_C5BEG3 Transposon tn10 tetd protein (Orfr) n=2 Tax=Edwa... 96 8e-19 UniRef50_B7LRE5 Putative uncharacterized protein n=1 Tax=Escheri... 95 2e-18 UniRef50_A8GHJ0 Transcriptional regulator, AraC family n=1 Tax=S... 95 2e-18 UniRef50_A8G9B3 Transcriptional regulator, AraC family n=1 Tax=S... 93 8e-18 UniRef50_B2VKB8 Regulatory protein SoxS n=1 Tax=Erwinia tasmanie... 91 5e-17 UniRef50_P26950 F1 operon positive regulatory protein n=19 Tax=Y... 89 1e-16 UniRef50_C8QA11 Transcriptional regulator, AraC family n=1 Tax=P... 89 2e-16 UniRef50_A2TEG4 AraC-like protein (Fragment) n=1 Tax=Serratia ma... 89 2e-16 UniRef50_B2VHH7 Putative transcriptional regulator n=1 Tax=Erwin... 88 3e-16 UniRef50_A4WA37 Transcriptional regulator, AraC family n=3 Tax=E... 87 4e-16 UniRef50_Q48413 Transcriptional activator ramA n=51 Tax=Bacteria... 87 5e-16 UniRef50_Q52620 Regulatory protein pqrA n=6 Tax=Enterobacteriace... 87 6e-16 UniRef50_D0ZAS7 Transcriptional regulator, AraC family n=2 Tax=E... 86 1e-15 UniRef50_C8QG57 Transcriptional regulator, AraC family n=1 Tax=P... 85 2e-15 UniRef50_A8GD44 Transcriptional regulator, AraC family n=9 Tax=E... 84 4e-15 UniRef50_B2Q528 Putative uncharacterized protein n=1 Tax=Provide... 84 6e-15 UniRef50_B8CLS6 Transcriptional regulator, AraC family n=1 Tax=S... 84 6e-15 UniRef50_D1ARB2 Transcriptional regulator, AraC family n=1 Tax=S... 83 7e-15 UniRef50_A6LYZ8 Transcription activator, effector binding n=1 Ta... 83 1e-14 UniRef50_A6VR73 Helix-turn-helix-domain containing protein AraC ... 82 2e-14 UniRef50_C6CRA3 Transcriptional regulator, AraC family n=8 Tax=B... 81 2e-14 UniRef50_D1NY75 Multiple antibiotic resistance protein MarA n=5 ... 81 3e-14 UniRef50_A7GBT6 Transcriptional regulator, AraC family n=13 Tax=... 80 5e-14 UniRef50_A8FAK9 Transcriptional regulator n=3 Tax=Bacillus RepID... 80 6e-14 UniRef50_B4D591 Transcriptional regulator, AraC family n=1 Tax=C... 80 8e-14 UniRef50_P0ACH6 Multiple antibiotic resistance protein marA n=13... 79 9e-14 UniRef50_A9KM10 Transcriptional regulator, AraC family n=1 Tax=C... 79 9e-14 UniRef50_Q2B3U5 Transcriptional regulator (AraC/XylS family) pro... 79 9e-14 UniRef50_C8P3F6 ARAC-type regulatory protein n=2 Tax=Erysipeloth... 79 1e-13 UniRef50_A6M0I1 Helix-turn-helix-domain containing protein, AraC... 79 1e-13 UniRef50_C5EQJ6 AraC-family transcriptional regulator n=1 Tax=Cl... 78 2e-13 UniRef50_C8QF79 Transcriptional regulator, AraC family n=1 Tax=P... 78 2e-13 UniRef50_D1P760 F1 operon positive regulatory protein n=1 Tax=Pr... 78 2e-13 UniRef50_B5EUU0 Transcriptional regulator, AraC family n=3 Tax=A... 78 2e-13 UniRef50_Q9K6U1 Transcriptional regulator (AraC/XylS family) n=1... 77 4e-13 UniRef50_A9KR18 Transcriptional regulator, AraC family n=3 Tax=F... 77 4e-13 UniRef50_C9NSU9 Putative uncharacterized protein n=1 Tax=Vibrio ... 77 4e-13 UniRef50_B8FSY0 Transcriptional regulator, AraC family n=6 Tax=C... 77 5e-13 UniRef50_A6TN59 Helix-turn-helix-domain containing protein, AraC... 77 5e-13 UniRef50_A4BGH9 Regulator of melibiose operon n=1 Tax=Reinekea b... 77 6e-13 UniRef50_UPI0001A4290C hypothetical protein PcarcW_09175 n=1 Tax... 77 7e-13 UniRef50_C0CY04 Putative uncharacterized protein n=2 Tax=Clostri... 77 7e-13 UniRef50_D2BST7 Transcriptional regulator, AraC family n=2 Tax=E... 76 8e-13 UniRef50_A6D8X3 Putative uncharacterized protein n=1 Tax=Vibrio ... 76 1e-12 UniRef50_C1FNH9 Transcriptional regulator, AraC family n=11 Tax=... 76 1e-12 UniRef50_B8K3P3 Transcriptional activator n=2 Tax=Vibrio RepID=B... 75 1e-12 UniRef50_B7JL95 Transcriptional regulator, AraC family n=54 Tax=... 75 2e-12 UniRef50_A1ZSG3 Transcriptional regulator, AraC type, putative n... 75 2e-12 UniRef50_C8Q9G3 Transcriptional regulator, AraC family n=1 Tax=P... 75 3e-12 UniRef50_C5BDV7 Transcriptional regulator, AraC family n=45 Tax=... 74 3e-12 UniRef50_A4BA46 Transcriptional regulator, AraC family protein n... 74 3e-12 UniRef50_B7VRB4 Transcription activator n=6 Tax=Vibrionales RepI... 74 4e-12 UniRef50_A8FAK8 Possible AraC family transcriptional regulator n... 74 4e-12 UniRef50_A4B9Y7 Putative uncharacterized protein n=1 Tax=Reineke... 74 5e-12 UniRef50_C3LC07 Transcriptional regulator, AraC family n=7 Tax=B... 74 5e-12 UniRef50_A8MLY7 Transcriptional regulator, AraC family n=1 Tax=A... 74 5e-12 UniRef50_A0KJN2 Transcriptional activator n=5 Tax=Gammaproteobac... 74 5e-12 UniRef50_Q180J9 AraC-family transcriptional regulator n=4 Tax=Cl... 74 6e-12 UniRef50_Q18D16 AraC-family transcriptional regulator n=6 Tax=Cl... 73 6e-12 UniRef50_A6FJ46 Uncharacterized protein conserved in bacteria n=... 73 7e-12 UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coproco... 73 7e-12 UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=C... 73 9e-12 UniRef50_A9KJQ6 Transcriptional regulator, AraC family n=2 Tax=C... 73 9e-12 UniRef50_A7JZZ4 Putative uncharacterized protein n=3 Tax=Vibrio ... 73 9e-12 UniRef50_B8H068 Transcriptional regulator, AraC family n=13 Tax=... 72 1e-11 UniRef50_B9Z4B5 Transcriptional regulator, AraC family n=1 Tax=L... 72 1e-11 UniRef50_C0Z5D7 Probable transcriptional regulator n=1 Tax=Brevi... 72 1e-11 UniRef50_C1I6N3 Transcriptional regulator n=1 Tax=Clostridium sp... 72 1e-11 UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C... 72 1e-11 UniRef50_B8I4L9 Transcriptional regulator, AraC family n=2 Tax=C... 72 1e-11 UniRef50_UPI0001789679 transcriptional regulator, AraC family n=... 72 2e-11 UniRef50_Q9K766 Transcriptional regulator (AraC/XylS family) n=1... 72 2e-11 UniRef50_A7FVD8 Transcriptional regulator, AraC family n=4 Tax=C... 72 2e-11 UniRef50_C9AWD9 AraC-family transcriptional regulator n=5 Tax=Fi... 72 2e-11 UniRef50_C5RM20 Transcriptional regulator, AraC family n=1 Tax=C... 72 2e-11 UniRef50_B0KTA0 Transcriptional regulator, AraC family n=2 Tax=P... 71 4e-11 UniRef50_C0D9U5 Putative uncharacterized protein n=1 Tax=Clostri... 70 4e-11 UniRef50_B8FUU7 Transcriptional regulator, AraC family n=2 Tax=D... 70 5e-11 UniRef50_B7GST4 Transcription activator, effector binding n=1 Ta... 70 5e-11 UniRef50_B8I706 Transcriptional regulator, AraC family n=1 Tax=C... 70 6e-11 UniRef50_B9JE85 Transcriptional regulator protein n=1 Tax=Agroba... 70 6e-11 UniRef50_C1D8X9 Putative uncharacterized protein n=1 Tax=Laribac... 70 6e-11 UniRef50_C9NSN9 Transcriptional regulator AraC family n=1 Tax=Vi... 70 7e-11 UniRef50_A8MJ72 Transcriptional regulator, AraC family n=1 Tax=A... 70 7e-11 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 70 8e-11 UniRef50_UPI0001789CA8 transcriptional regulator, AraC family n=... 69 1e-10 UniRef50_A6LY67 Helix-turn-helix-domain containing protein, AraC... 69 1e-10 UniRef50_C6CRD1 Transcriptional regulator, AraC family n=2 Tax=F... 69 1e-10 UniRef50_UPI0001C368D7 AraC-family transcriptional regulator n=2... 69 1e-10 UniRef50_D1UAH3 Transcriptional regulator, AraC family n=1 Tax=D... 69 2e-10 UniRef50_C4ZHQ7 Transcriptional regulator, AraC family n=2 Tax=C... 69 2e-10 UniRef50_C6CRY2 Transcriptional regulator, AraC family n=69 Tax=... 69 2e-10 UniRef50_C1DQ04 Transcriptional regulator, AraC family n=1 Tax=A... 69 2e-10 UniRef50_C4X996 Regulatory protein n=4 Tax=Klebsiella RepID=C4X9... 69 2e-10 UniRef50_D0YX27 Hypothetical transcription regulator n=1 Tax=Pho... 69 2e-10 UniRef50_UPI0001787EAC transcriptional regulator, AraC family n=... 69 2e-10 UniRef50_A9KRP2 Transcriptional regulator, AraC family n=7 Tax=B... 69 2e-10 UniRef50_C6LAW9 Putative transcriptional regulator n=1 Tax=Bryan... 68 2e-10 UniRef50_A6TGX0 Regulation of superoxide response regulon n=6 Ta... 68 2e-10 UniRef50_Q17ZV7 AraC-family transcriptional regulator n=7 Tax=Ba... 68 3e-10 UniRef50_C6IVK7 AraC family transcriptional regulator n=1 Tax=Pa... 68 3e-10 UniRef50_C8ZY41 AraC family transcriptional regulator n=1 Tax=En... 68 3e-10 UniRef50_UPI000179450C hypothetical protein CLOSPO_01339 n=1 Tax... 68 3e-10 UniRef50_C5EUD7 Putative uncharacterized protein n=1 Tax=Clostri... 68 3e-10 UniRef50_B1HZR5 Transcriptional regulator (AraC/XylS family) n=1... 68 3e-10 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 67 4e-10 UniRef50_B9Z8M5 Transcriptional regulator, AraC family n=1 Tax=L... 67 4e-10 UniRef50_A5FBU0 Transcriptional regulator, AraC family n=1 Tax=F... 67 4e-10 UniRef50_Q12PA0 Transcriptional regulator, AraC family n=1 Tax=S... 67 4e-10 UniRef50_D2LQS1 Transcriptional regulator, AraC family n=1 Tax=B... 67 5e-10 UniRef50_B5JGT3 Bacterial transcription activator, effector bind... 67 5e-10 UniRef50_A1ZL96 Transcriptional regulator, AraC-type n=1 Tax=Mic... 67 6e-10 UniRef50_A8TTK0 Transcriptional regulator, AraC family protein n... 67 6e-10 UniRef50_A1UID3 Transcriptional regulator, AraC family n=5 Tax=M... 67 6e-10 UniRef50_B1BZ28 Putative uncharacterized protein n=2 Tax=Firmicu... 67 6e-10 UniRef50_A3Y825 Transcriptional regulator, AraC family protein n... 67 7e-10 UniRef50_Q64RP2 AraC-type transcriptional regulator n=6 Tax=Bact... 67 7e-10 UniRef50_A5W8X4 Transcriptional regulator, AraC family n=13 Tax=... 66 8e-10 UniRef50_A6LBE5 Transcriptional regulator n=3 Tax=Bacteroidales ... 66 9e-10 UniRef50_C7X8J2 Transcriptional regulator n=2 Tax=Bacteroidales ... 66 1e-09 UniRef50_A0Z695 Transcriptional regulator, AraC family protein n... 66 1e-09 UniRef50_C8P1I3 AraC family transcriptional regulator n=1 Tax=Er... 66 1e-09 UniRef50_A6EIJ9 Transcriptional regulator, AraC family protein n... 66 1e-09 UniRef50_B7AMQ1 Sensor protein n=1 Tax=Bacteroides eggerthii DSM... 66 1e-09 UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostri... 66 1e-09 UniRef50_B9YCD3 Putative uncharacterized protein n=3 Tax=Firmicu... 66 1e-09 UniRef50_UPI0001C357C1 AraC family transcription regulator n=1 T... 66 1e-09 UniRef50_Q81BV9 Transcriptional regulator, AraC family n=72 Tax=... 66 1e-09 UniRef50_Q63B02 Transcriptional regulator, AraC family n=72 Tax=... 65 1e-09 UniRef50_C1FM43 AraC-family transcriptional regulator n=2 Tax=Cl... 65 1e-09 UniRef50_Q6LLD3 Hypothetical bacterial regulatory helix-turn-hel... 65 2e-09 UniRef50_C0YRY4 AraC family transcriptional regulator n=1 Tax=Ch... 65 2e-09 UniRef50_A5G790 Transcriptional regulator, AraC family n=3 Tax=B... 65 2e-09 UniRef50_B2JCG9 Transcriptional regulator, AraC family n=52 Tax=... 65 2e-09 UniRef50_A9BU22 Transcriptional regulator, AraC family n=2 Tax=P... 65 2e-09 UniRef50_C1FU00 Transcriptional regulator, AraC family n=8 Tax=F... 65 2e-09 UniRef50_A6LQ44 Helix-turn-helix-domain containing protein, AraC... 65 2e-09 UniRef50_Q88KW6 Transcriptional regulator, AraC family n=11 Tax=... 65 2e-09 UniRef50_Q48G15 Transcriptional regulator ArgR n=24 Tax=Pseudomo... 65 2e-09 UniRef50_Q187G0 AraC-family transcriptional regulator n=37 Tax=r... 65 2e-09 UniRef50_C1ADB7 AraC family transcriptional regulator n=1 Tax=Ge... 65 2e-09 UniRef50_C9YDH7 Putative uncharacterized protein n=1 Tax=Curviba... 65 2e-09 UniRef50_B8FN17 Transcriptional regulator, AraC family n=1 Tax=D... 65 2e-09 UniRef50_B0C4S9 Transcriptional Regulator, AraC family n=1 Tax=A... 65 3e-09 UniRef50_O31456 Uncharacterized HTH-type transcriptional regulat... 65 3e-09 UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnos... 64 3e-09 UniRef50_D2MMM4 Transcriptional regulator, AraC family n=1 Tax=B... 64 3e-09 UniRef50_Q880U5 Transcriptional regulator, AraC family n=2 Tax=P... 64 3e-09 UniRef50_A8RX40 Putative uncharacterized protein n=1 Tax=Clostri... 64 3e-09 UniRef50_B1MI41 Putative transcriptional regulator, AraC family ... 64 4e-09 UniRef50_A6VUB3 Transcriptional regulator, AraC family n=3 Tax=P... 64 4e-09 UniRef50_A8UPH5 Transcriptional regulator, AraC-type n=3 Tax=Fla... 64 4e-09 UniRef50_B4WW69 Transcriptional regulator, AraC family protein n... 64 4e-09 UniRef50_Q1QYW4 Transcriptional regulator, AraC family with amid... 64 4e-09 UniRef50_A3YG43 Transcriptional regulator, AraC family protein n... 64 4e-09 UniRef50_B7HW35 Transcriptional regulator, AraC family n=34 Tax=... 64 5e-09 UniRef50_UPI00019685E3 hypothetical protein BACCELL_00469 n=1 Ta... 64 5e-09 UniRef50_A9KPU7 Transcriptional regulator, AraC family n=1 Tax=C... 64 5e-09 UniRef50_A3X5E2 Transcriptional regulator, AraC family protein n... 64 5e-09 UniRef50_A6EEH6 Two-component system sensor histidine kinase/res... 64 5e-09 UniRef50_C6J7H0 Transcriptional regulator n=1 Tax=Paenibacillus ... 64 5e-09 UniRef50_A3ZMZ0 Transcriptional regulator, AraC family protein n... 64 6e-09 UniRef50_C6LAX2 Regulatory protein SoxS n=1 Tax=Bryantella forma... 64 6e-09 UniRef50_B0MIQ9 Putative uncharacterized protein n=1 Tax=Anaeros... 64 6e-09 UniRef50_C6LHX0 Transcriptional regulator, AraC family n=1 Tax=B... 64 6e-09 UniRef50_A3SJ23 Transcriptional regulator, AraC family protein n... 64 6e-09 UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=D... 63 6e-09 UniRef50_B8I0Z7 Transcriptional regulator, AraC family n=3 Tax=C... 63 7e-09 UniRef50_B1YLZ4 Transcriptional regulator, AraC family n=1 Tax=E... 63 7e-09 UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaeros... 63 7e-09 UniRef50_UPI0001A437FB DNA-binding transcriptional activator Mar... 63 7e-09 UniRef50_C5EMR3 Transcriptional regulator n=4 Tax=Clostridiales ... 63 7e-09 UniRef50_Q2CGL8 Transcriptional regulator, AraC family protein n... 63 7e-09 UniRef50_D0Y1I0 Transcriptional regulator, AraC family n=1 Tax=C... 63 8e-09 UniRef50_D1N9J7 Transcriptional regulator, AraC family n=1 Tax=V... 63 8e-09 UniRef50_D2QUQ8 Transcriptional regulator, AraC family n=1 Tax=S... 63 8e-09 UniRef50_C3QXL3 Transcriptional regulator n=7 Tax=Bacteroides Re... 63 8e-09 UniRef50_A8TRB7 Probable transcriptional regulator n=1 Tax=alpha... 63 8e-09 UniRef50_C5ERZ6 Right origin-binding protein n=1 Tax=Clostridial... 63 8e-09 UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32... 63 9e-09 UniRef50_A9IAC9 Transcriptional regulator, AraC family n=1 Tax=B... 63 9e-09 UniRef50_C5RPC5 Transcriptional regulator, AraC family n=2 Tax=B... 63 9e-09 UniRef50_A6FZ48 Probable AraC-family transcriptional regulator n... 63 1e-08 UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=B... 63 1e-08 UniRef50_A3DK60 Transcriptional regulator, AraC family n=2 Tax=C... 63 1e-08 UniRef50_Q24TQ4 Putative uncharacterized protein n=2 Tax=Clostri... 63 1e-08 UniRef50_C7IKI0 Transcriptional regulator, AraC family n=1 Tax=C... 62 1e-08 UniRef50_C1I806 Helix-turn-helix domain-containing protein n=1 T... 62 1e-08 UniRef50_A3W1D7 Transcriptional regulator, AraC family protein n... 62 1e-08 UniRef50_B9Y4X5 Putative uncharacterized protein n=5 Tax=Firmicu... 62 1e-08 UniRef50_Q65T74 AraC protein n=2 Tax=Gammaproteobacteria RepID=Q... 62 1e-08 UniRef50_C3RPB0 AraC-family transcriptional regulator n=3 Tax=Ba... 62 1e-08 UniRef50_C3MCC1 Putative AraC family transcriptional regulator n... 62 1e-08 UniRef50_A3VW30 Transcriptional regulator, AraC family protein n... 62 1e-08 UniRef50_A8KXI5 Transcriptional regulator, AraC family n=73 Tax=... 62 2e-08 UniRef50_D0LVM9 Transcriptional regulator, AraC family n=1 Tax=H... 62 2e-08 UniRef50_C7IHL6 Transcriptional regulator, AraC family n=1 Tax=C... 62 2e-08 UniRef50_A5KJJ5 Putative uncharacterized protein n=1 Tax=Ruminoc... 62 2e-08 UniRef50_Q30V01 Transcriptional regulator, AraC type n=1 Tax=Des... 62 2e-08 UniRef50_C7IHS7 Transcriptional regulator, AraC family n=1 Tax=C... 62 2e-08 UniRef50_B8I4H6 Transcriptional regulator, AraC family n=1 Tax=C... 62 2e-08 UniRef50_C7D6R0 Transcriptional regulator, AraC family n=1 Tax=T... 62 2e-08 UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevi... 62 2e-08 UniRef50_C5RJ15 Transcriptional regulator, AraC family n=1 Tax=C... 62 2e-08 UniRef50_B9QTY6 Transcriptional regulator, AraC family protein n... 62 2e-08 UniRef50_C3RHZ9 Transcriptional regulator n=2 Tax=Bacteria RepID... 62 2e-08 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 62 2e-08 UniRef50_A9D0S3 Transcription regulator n=3 Tax=Phyllobacteriace... 62 2e-08 UniRef50_B0MA57 Putative uncharacterized protein n=1 Tax=Anaeros... 62 2e-08 UniRef50_UPI0001C355CA AraC family regulatory protein n=1 Tax=Cl... 62 2e-08 UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabac... 61 2e-08 UniRef50_B5XU59 Transcriptional regulator, AraC family n=33 Tax=... 61 2e-08 UniRef50_Q89XQ2 Transcriptional regulatory protein n=1 Tax=Brady... 61 3e-08 UniRef50_C6C829 Transcriptional regulator, AraC family n=1 Tax=D... 61 3e-08 UniRef50_B7GNV2 Transcriptional regulator, AraC family n=1 Tax=B... 61 3e-08 UniRef50_A6VT03 Helix-turn-helix-domain containing protein AraC ... 61 3e-08 UniRef50_Q03Q27 Transcriptional regulator, AraC family n=1 Tax=L... 61 3e-08 UniRef50_A8I184 Transcriptional regulator n=3 Tax=Rhizobiales Re... 61 3e-08 UniRef50_UPI0001C3592F AraC-like transcriptional regulator n=1 T... 61 3e-08 UniRef50_C2LFG5 Transcriptional regulator n=6 Tax=Enterobacteria... 61 3e-08 UniRef50_C6MNU8 Transcriptional regulator, AraC family n=1 Tax=G... 61 3e-08 UniRef50_A6FWZ8 Transcriptional regulator, AraC family protein n... 61 3e-08 >UniRef50_P77601 Putative HTH-type transcriptional regulator ykgA n=49 Tax=Enterobacteriaceae RepID=YKGA_ECOLI Length = 239 Score = 501 bits (1291), Expect = e-141, Method: Compositional matrix adjust. Identities = 239/239 (100%), Positives = 239/239 (100%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP Sbjct: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 Query: 61 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW Sbjct: 61 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 Query: 121 DLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM 180 DLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM Sbjct: 121 DLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM 180 Query: 181 KNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWTQA 239 KNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWTQA Sbjct: 181 KNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWTQA 239 >UniRef50_B6ICR1 Putative transcription regulator n=1 Tax=Escherichia coli SE11 RepID=B6ICR1_ECOSE Length = 294 Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 76/198 (38%), Positives = 117/198 (59%), Gaps = 3/198 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M++ I+ +L WIE ++E I IED+ SGYSRR IQ LF+ + LG Y+++RRLC Sbjct: 1 MLQTMIINDILIWIENHIEDGIIIEDVVNLSGYSRRYIQYLFKKETGLSLGGYLKRRRLC 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 R A+ VRLT MLDIA+ L FDSQQSFSREFKK+F C P YR RDYWDL+ + P + Sbjct: 61 RGAMYVRLTTMRMLDIAVRLRFDSQQSFSREFKKVFNCPPYIYRTRDYWDLSCLCPPWEY 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVS 191 + + P+ G+ F Y+ + + +R ++ M+ + + +++ Sbjct: 121 NMTGIPKVDFVRLPQLSYSGHMFSYNENILGTRGE---AVREKNITNDMRLYSENFLYIT 177 Query: 192 TFEPSTKSVDLLTVETFA 209 + PS K+ + + ++TF+ Sbjct: 178 YYSPSIKNSENVFIKTFS 195 >UniRef50_B5RA11 Putative transcriptional regulator n=35 Tax=Salmonella enterica RepID=B5RA11_SALG2 Length = 285 Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 116/199 (58%), Gaps = 1/199 (0%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M+++ I+ +LE IE NLE I IE + +GYSRR++Q F+ V +G+YIR+R+L Sbjct: 2 MMKKAIIISVLEQIEKNLEERIDIEKLVVITGYSRRSLQDFFKEKCGVSIGKYIRQRKLS 61 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 R+A L++LT++S+ DIA + FDS QS+SRE KK FG +P YR D+WDL N+ P + + Sbjct: 62 RSATLLKLTSQSVTDIAFRMGFDSVQSYSRELKKTFGVNPNNYRKADFWDLRNLRPPYWL 121 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVS 191 + + + IFG + I +N P + ++ + ++ + ++Y +S Sbjct: 122 DCDEHYQFEICQLTSKEIFGFQTSHQI-ATNDLPKKASPIKWKIIHETLRTWGENVYCLS 180 Query: 192 TFEPSTKSVDLLTVETFAG 210 +F+P ++ V +F G Sbjct: 181 SFKPDNTKDQVIAVSSFFG 199 >UniRef50_B6ICR2 Putative transcription regulator n=1 Tax=Escherichia coli SE11 RepID=B6ICR2_ECOSE Length = 276 Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 77/217 (35%), Positives = 125/217 (57%), Gaps = 11/217 (5%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 I + I+Q ++ WIE N+E I IED+A +GY RRN+QL+F+ ++H+ LGEYIR+R++ R Sbjct: 7 IDRLIVQHIILWIEDNIESTIKIEDVATITGYCRRNVQLIFKRYVHISLGEYIRRRKIAR 66 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIR 132 AA L++ + +++DI++ LHFDSQQSF+REFKK+ G P++YR+R+YW+L + P ++ Sbjct: 67 AAALLKTSTLNLIDISIRLHFDSQQSFTREFKKILGVPPQKYRNRNYWNLPYLCPPYIWG 126 Query: 133 QQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVST 192 + I+F + D+ N S R+ + + +K D+Y +S Sbjct: 127 KA-------ISFTFLELSEMVLTTDVIPGNYSCFS----RKETIMSYIDKYKADVYCISG 175 Query: 193 FEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLY 229 + K DL + + T K+ T GLY Sbjct: 176 YGLQQKIGDLDYRDNYIATTKNDKAHCKKLTIPSGLY 212 >UniRef50_C2LM40 Right origin-binding protein n=2 Tax=Proteus mirabilis RepID=C2LM40_PROMI Length = 298 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 67/194 (34%), Positives = 117/194 (60%), Gaps = 8/194 (4%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M+++ +++ ++ WIE NL+ +S++ IA+KSGY++ + Q LF+ + + LG+Y+ RRL Sbjct: 1 MLQENVVKDIIVWIEQNLDSRLSLDIIAEKSGYTKWHFQRLFKAYTGISLGKYVLARRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLAN-IFPSFL 130 A +R+T S+LDI+L HFDSQQ+F R FKK F +P EYR + WD++ IFP+ L Sbjct: 61 CGAYALRITRSSLLDISLKYHFDSQQTFCRAFKKQFNITPSEYRKKQGWDISELIFPA-L 119 Query: 131 IRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMK---NFKTDI 187 + K + ++ P + G + +Y+ +S + D++ K R+ + +K T++ Sbjct: 120 ETVELKAKYEVMTLPSKELIGMAHQYNKNISAWNYDKK-KFRKEFWKKFLKEIHTIPTEM 178 Query: 188 YFVSTFEPSTKSVD 201 Y +T S S+D Sbjct: 179 Y--ATHRASAGSLD 190 >UniRef50_D1P487 Right origin-binding protein n=2 Tax=Providencia RepID=D1P487_9ENTR Length = 295 Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 92/145 (63%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M+++ ++++++ WIE NLE +S++ +A KSGY++ + Q LF+N + LG YIR RRL Sbjct: 1 MLQESVIREIILWIEQNLESRLSLDTVADKSGYTKWHFQRLFKNQTGLALGSYIRARRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 +A+ +RLT S++DI+L FDSQQ+F R FKK FG +P EYR R W + Sbjct: 61 CSAVALRLTNDSIMDISLRYRFDSQQTFCRAFKKQFGVTPSEYRKRTGWHIEGFCLPLRE 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKY 156 ++ + + +L+ PE + G + +Y Sbjct: 121 SKELQAQVQLVELPEINLLGMTHRY 145 >UniRef50_B4EY53 Right origin-binding protein n=55 Tax=Enterobacteriaceae RepID=B4EY53_PROMH Length = 300 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 56/140 (40%), Positives = 86/140 (61%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + I++ LL W++ NL+ P+S++++A K+GYS+ ++Q +F+ +G YIR RRL Sbjct: 1 MDQTNIIRDLLAWLDNNLDQPLSLDNVATKAGYSKWHLQRMFKEVTGQAIGSYIRSRRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 RAA+ +RLT++ +LDIAL FDSQQ+F+R FKK F +P YR D W I P + Sbjct: 61 RAAVALRLTSRPILDIALQYRFDSQQTFTRAFKKQFDRTPALYRRSDEWCAVGICPPIKL 120 Query: 132 RQQQKTECRLINFPETPIFG 151 Q + + PE + G Sbjct: 121 DPQPLPKWEYVQLPEIKLIG 140 >UniRef50_D2TW49 Right origin-binding protein n=1 Tax=Arsenophonus nasoniae RepID=D2TW49_9ENTR Length = 305 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 111/208 (53%), Gaps = 2/208 (0%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + I++ LL WI+ +L+ P+ ++++A K+GYS+ ++Q +F+N +G YIR RRL Sbjct: 1 MDQNNIIRDLLYWIDTHLDQPLFLDNVAAKAGYSKWHLQRMFKNITQQAIGSYIRARRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 RAA+ +RLT++ +LDIAL FDSQQ+F+R FKK FG +P YR + W + P + Sbjct: 61 RAAVALRLTSRPILDIALQYRFDSQQTFTRAFKKQFGITPALYRRSEDWCATGMQPPITL 120 Query: 132 RQQQKTECRLINFPETPIFG--NSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 +Q+ + + G + Y +E + + E K + KN ++Y Sbjct: 121 EEQKLPNVSFVTLTPKHLMGIEQTCSYILEEWSTACAEMRKHFWQYYQDKAKNIPNEVYG 180 Query: 190 VSTFEPSTKSVDLLTVETFAGTVCEYAD 217 + S++ + TV +YAD Sbjct: 181 LHRVVHSSEKDEEQTVLYITAVEPQYAD 208 >UniRef50_A9MRK1 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MRK1_SALAR Length = 286 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 4/204 (1%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 +KI+Q + WIE ++E +I+D+ +GYSRR +QL+F+ VP+G Y+R+R++CRAA Sbjct: 5 KKIVQHFVRWIEDHIEEDKTIDDLVNYTGYSRRAVQLMFKKEYGVPVGTYMRQRKMCRAA 64 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQ 134 L+RLT S+++IA +HF Q+F R FK F +P EYR+ WDL+ + P+ I Sbjct: 65 TLLRLTKLSVIEIAHRVHFSGTQNFGRAFKHAFNMTPTEYRNLPSWDLSLLVPAINIDNC 124 Query: 135 QKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFE 194 + ++ + G+ Y ++ E + R + + +KT+I S F Sbjct: 125 WNVDSCIVERSGIYVSGDECFYQQKILRTPTLESKRNRLKKIRHYSELYKTNIVIASNFL 184 Query: 195 PSTKSV----DLLTVETFAGTVCE 214 P D++ + +G E Sbjct: 185 PPKNRYSAIRDVIDITMLSGVEVE 208 >UniRef50_P0ACI1 Right origin-binding protein n=101 Tax=Enterobacteriaceae RepID=ROB_ECO57 Length = 289 Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 56/153 (36%), Positives = 92/153 (60%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + I++ LL W+E +L+ P+S++++A K+GYS+ ++Q +F++ +G YIR RRL Sbjct: 1 MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 ++A+ +RLTA+ +LDIAL FDSQQ+F+R FKK F +P YR W I P + Sbjct: 61 KSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRL 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKS 164 + E + + +TP+ G + Y + S Sbjct: 121 GEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQIS 153 >UniRef50_D0YAG4 Transcriptional regulator, AraC family n=6 Tax=Klebsiella RepID=D0YAG4_KLEVA Length = 299 Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 60/150 (40%), Positives = 91/150 (60%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 ++Q + ++L W+E N+ SI+D+AQ GYSRR + +F + +P+G+YIR RRL Sbjct: 1 MKQMLYLKMLAWLEDNIYCNPSIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTI 60 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIR 132 AA+ +RLT + + IA L +DS Q+FSREFKK F SPREYR +WD A + F Sbjct: 61 AAVSLRLTRQPIAAIAWQLSYDSPQTFSREFKKRFSLSPREYRCAVHWDTALLLKKFDPE 120 Query: 133 QQQKTECRLINFPETPIFGNSFKYDIEVSN 162 + + R + PE G+ KY++ +S+ Sbjct: 121 GESLPQARFCSLPERVYRGSPMKYELRLSD 150 >UniRef50_C6C946 Transcriptional regulator, AraC family n=3 Tax=Dickeya RepID=C6C946_DICDC Length = 313 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 55/141 (39%), Positives = 86/141 (60%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + + L+ WIE +LE P+ I D+ KSGYS+ ++Q +F+ + LG YIR RRL +AA+ Sbjct: 10 RFIADLVGWIESHLESPLMISDVTAKSGYSKWHLQRMFKKETGISLGTYIRNRRLSQAAV 69 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQ 135 ++LT++++ ++AL FDSQQSF+R FKK FG SP YR + WD +++ PS + Sbjct: 70 ELKLTSQTIQEVALRYCFDSQQSFTRTFKKHFGTSPGHYRKQSSWDFSSLQPSLRLNVNA 129 Query: 136 KTECRLINFPETPIFGNSFKY 156 ++ P P F+Y Sbjct: 130 VPVPEVVALPRLPANRCHFEY 150 >UniRef50_C4X304 Right origin-binding protein n=9 Tax=cellular organisms RepID=C4X304_KLEPN Length = 289 Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 55/153 (35%), Positives = 91/153 (59%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + I++ LL W+E +L+ P+S++++A K+GYS+ ++Q +F++ +G YIR RRL Sbjct: 1 MDQAGIIRDLLSWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 ++A+ +RLTA+ +LDIAL FDSQQ+F+R FKK F +P YR W + P + Sbjct: 61 KSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFSLTPALYRRSPDWSSFGMRPPLRL 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKS 164 + + I P T + G + Y ++ S Sbjct: 121 GEFTLPKHEFITLPPTQLLGVTQSYTCKLEEIS 153 >UniRef50_B6XK96 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B6XK96_9ENTR Length = 310 Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/172 (34%), Positives = 101/172 (58%), Gaps = 5/172 (2%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M+++ ++++++ WIE NLE +S++ +A KSGY++ + Q LF+ + LG YIR RRL Sbjct: 17 MLQESVIREIILWIEQNLESRLSLDTVADKSGYTKWHFQRLFKTQTGLALGAYIRARRLS 76 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 +A+ +RLT S++DI+L FDSQQ+F R FKK FG +P EYR R W + Sbjct: 77 CSAVALRLTNDSIMDISLRYRFDSQQTFCRAFKKQFGVTPSEYRKRTGWHIEGFRLPLRE 136 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNF 183 ++ + +L+ + + G + +Y ++ + E +LRR + KNF Sbjct: 137 SKELEAHVQLVELKDIHLVGMTHRYTQGINEWNLKTE-ELRRQY----WKNF 183 >UniRef50_B4EVW5 AraC-family transcriptional regulator n=3 Tax=Proteus RepID=B4EVW5_PROMH Length = 304 Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 56/141 (39%), Positives = 84/141 (59%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 +++++LL WIE NLE P+ ++D+A KSGY++ ++Q +F+ + L YIR RRL +AA Sbjct: 20 EVIKELLLWIEVNLEKPLLLDDVAIKSGYTKWHLQRVFKQATGLTLASYIRGRRLTKAAT 79 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQ 135 +RLT +L IAL FDSQQSF+R FK +FG +P EYR D N P Sbjct: 80 ELRLTKLPVLTIALRYQFDSQQSFTRRFKAVFGVTPSEYRKVDVLCSDNFQPPINFEVTD 139 Query: 136 KTECRLINFPETPIFGNSFKY 156 +I PE+ ++ ++Y Sbjct: 140 LPIPNIIELPESFLYVIQYQY 160 >UniRef50_P43463 HTH-type transcriptional activator aarP n=3 Tax=Providencia RepID=AARP_PROST Length = 135 Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 54/113 (47%), Positives = 77/113 (68%), Gaps = 2/113 (1%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 I+ ++L WIE NL + +S++DIAQ SGY++ ++Q +FR + +PLGEYIR+RR+C AA Sbjct: 20 IISEILVWIEGNLTNRLSLDDIAQHSGYTKWHLQRVFRKIVGMPLGEYIRRRRICEAAKE 79 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD--YWDLANIFP 127 ++ T ++DIAL FDSQQSF++ FK G SP YR D Y DL + P Sbjct: 80 LQTTNLQVIDIALKYQFDSQQSFAKRFKAYLGISPSLYRLSDTGYNDLLLLEP 132 >UniRef50_P0A9E4 Regulatory protein soxS n=98 Tax=Proteobacteria RepID=SOXS_ECO57 Length = 107 Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 49/106 (46%), Positives = 76/106 (71%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M QKI+Q L+ WI+ +++ P++I+ +A+KSGYS+ +Q +FR H LG+YIR+RRL Sbjct: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 AA+ +R T + + DIA+ L + SQQ+FSR F++ F +P +YRHR Sbjct: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 >UniRef50_Q2NSQ1 Putative right origin-binding protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NSQ1_SODGM Length = 201 Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 1/188 (0%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + I+Q LL W+E +L+ P+++ +A++SGYS+ ++Q F+ +G YIR RRL Sbjct: 1 MDQAGIIQDLLSWLEGHLDTPLTLNRVAERSGYSKWHLQRKFKLATGQAIGAYIRARRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 RA + +RLT++S+ DIAL FDSQQ+F+R FKK F +P YR W ++P + Sbjct: 61 RAVLALRLTSRSVADIALQYGFDSQQTFTRPFKKQFIQTPALYRRSRKWHFLGMYPPYRF 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVS 191 + + + + G S Y + S + LR H + + T + Sbjct: 121 DSRPLPQAEFVTLQVMTLIGTSQSYTCTLEQLS-EYRTNLRSHFWRQFLAAMPTKPPVLY 179 Query: 192 TFEPSTKS 199 P +S Sbjct: 180 GLSPHRRS 187 >UniRef50_Q6WFA3 Putative transcription factor Roh n=1 Tax=Enterobacter cloacae RepID=Q6WFA3_ENTCL Length = 134 Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 47/119 (39%), Positives = 81/119 (68%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 +++ +++W+E +L + +E+IA+KSGYSR + Q +F++ + LGEY+R RRL AA+ Sbjct: 10 VVKDIVQWVENSLTSTLLVEEIAEKSGYSRWHFQRIFKHATGIALGEYVRARRLTCAAVE 69 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQ 135 ++LT K++L+IAL F+SQQ+F+R FK F P YR + W+L+ + P L+ ++ Sbjct: 70 LKLTTKTVLEIALHYGFESQQTFTRSFKNKFHLPPGRYRKQIAWNLSALCPPLLLEHEE 128 >UniRef50_P28816 Transposon Tn10 tetD protein n=29 Tax=root RepID=TETD_ECOLX Length = 138 Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 48/106 (45%), Positives = 71/106 (66%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 +++ +L WIE NL+ + ++D+A K+GY++ Q LF+ V L YIR RRL +AA+ Sbjct: 29 VIKDVLLWIEHNLDQSLLLDDVANKAGYTKWYFQRLFKKVTGVTLASYIRARRLTKAAVE 88 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDL 122 +RLT K++L+IAL FDSQQSF+R FK +F +P YR W+L Sbjct: 89 LRLTKKTILEIALKYQFDSQQSFTRRFKYIFKVTPSYYRRNKLWEL 134 >UniRef50_Q49JG3 LdaA n=9 Tax=Enterobacteriaceae RepID=Q49JG3_ECOLX Length = 309 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 49/113 (43%), Positives = 79/113 (69%), Gaps = 1/113 (0%) Query: 13 IRQKILQQLLEWIECNLE-HPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 +++ + +L++IE N+E PI I + + SGYSRR +QLLF +++ +P+G+YI++RR+ Sbjct: 3 LKKMTINAILDYIEDNIEISPIDINSLVEYSGYSRRYLQLLFFDYIGMPVGKYIQRRRVS 62 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLAN 124 RAA+L+RLT ++ I+ L +DSQQ+F+REFKK G +P +YR W N Sbjct: 63 RAAVLLRLTNLPLVTISEKLCYDSQQTFTREFKKHTGNTPLQYRKDKIWTFKN 115 >UniRef50_A8GJ26 Transcriptional regulator, AraC family n=2 Tax=Serratia RepID=A8GJ26_SERP5 Length = 288 Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 86/147 (58%), Gaps = 2/147 (1%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +++LL WIE NL +P+S++ ++ KSGYS+ +Q +F+ + L YIR RRL AA + Sbjct: 8 IRELLVWIEDNLTNPLSLDIVSAKSGYSKWYLQRMFKTQTGLSLASYIRARRLYLAAFAL 67 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKT 137 R T K++LDI++ FD+QQ+FSR FKK F SP YRH D +++ S Sbjct: 68 RFTQKTILDISIEYQFDNQQTFSRCFKKHFAESPSVYRHARKQDFSHLVRSLSANHPGDI 127 Query: 138 ECRLINFPET--PIFGNSFKYDIEVSN 162 + I + I G S+ Y +++++ Sbjct: 128 QVDRIKVAKGQYAIKGKSYAYHLDIAD 154 >UniRef50_B2K4J9 Transcriptional regulator, AraC family n=34 Tax=Enterobacteriaceae RepID=B2K4J9_YERPB Length = 297 Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 49/137 (35%), Positives = 82/137 (59%) Query: 26 ECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTAKSML 85 E NLE +++D+A+ SGYS+ ++Q F++ + + L YIR R L RAA+ +R++ K ++ Sbjct: 17 EINLEKRPTLDDVAKISGYSKWHLQRKFKSIVGLQLASYIRGRVLTRAAVALRISRKPII 76 Query: 86 DIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKTECRLINFP 145 I+ L FDSQQ+F+R FKK FG +P +R ++WD+ + P F + E + + P Sbjct: 77 TISDELGFDSQQTFTRTFKKRFGVTPNSFRQMNHWDVQGMIPRFGFYENYTPEIKQVTLP 136 Query: 146 ETPIFGNSFKYDIEVSN 162 + G + + D E N Sbjct: 137 GKELVGFTRRLDFEEYN 153 >UniRef50_C2LMQ2 Regulatory protein n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LMQ2_PROMI Length = 285 Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 53/141 (37%), Positives = 80/141 (56%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 + KI+ +L+WIE NL PIS D+ +KSGYS+R Q LF + + +YI R+L Sbjct: 1 MHDKIINDILDWIEDNLTKPISTIDVIKKSGYSQRYFQDLFLHKTKSTIAKYILSRKLSM 60 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIR 132 +AIL++LT S+ +I+ F SQQ+FSR FK+ F +P YR +WD P + Sbjct: 61 SAILLKLTRYSISEISNDYSFTSQQNFSRAFKRYFKVTPEFYRKSKFWDFRYYRPQHKVF 120 Query: 133 QQQKTECRLINFPETPIFGNS 153 +K C+LI + + N+ Sbjct: 121 DFKKINCQLIYLSKDRLLDNN 141 >UniRef50_C8QBQ6 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QBQ6_9ENTR Length = 288 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 11/225 (4%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 ++++ + L++WIE NL ++I+ I+ KSGYS+ ++Q +F+ L Y RKRRL Sbjct: 6 LKKQYINDLVDWIEANLTDELNIDLISLKSGYSKWHMQRMFKEMTGQTLASYTRKRRLTM 65 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIR 132 +A+ +RLT ++DIA+ FD+QQ+F+R FK F +P YR L + F S + Sbjct: 66 SAMALRLTRMPLIDIAVRFGFDNQQNFTRVFKNHFSLTPGAYRRIPELQLKD-FHSRIPT 124 Query: 133 QQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFK----TDIY 188 Q + + RL PE + G +++ D + +H AR F + Sbjct: 125 QHRWVDVRLAEKPELRLCGEVIEWECRFGEYIHDHGDVVAQH--ARDFVAFAGQHVNKGW 182 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVCEYAD-MPK---EWTTTRGLY 229 F P S D + F ++ D +P WT GLY Sbjct: 183 LGFQFSPGEGSADQQHISLFQALESQHGDVLPSNVVNWTGESGLY 227 >UniRef50_B3IA10 LdaA n=1 Tax=Escherichia coli E22 RepID=B3IA10_ECOLX Length = 327 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 21/236 (8%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEH-PISIEDIAQKSGYSRRNIQLLFRNFMHV 59 + Y+ + M++ + + ++I+ NL+ I+I+D+ SGYSRR +QLLF+ + + Sbjct: 29 LSYNSYMLGGFMLKLMTVNAITQYIDDNLDKTSINIDDLVAYSGYSRRYLQLLFKRHIGM 88 Query: 60 PLGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 +G YI+ RR+ RAA+ +RLT S+ +I+ L +DS Q+FSREFKK G +P +YR + Sbjct: 89 AVGRYIQLRRVSRAAVFLRLTDLSLSEISERLLYDSPQTFSREFKKNTGYTPLQYRSSNV 148 Query: 120 WDLANI---------FPSFLIRQQQKTECRLINF----PETPIFG-NSFKYDIEVSNKSP 165 W N+ FP+ + Q QK + +F E P +G NS +++ Sbjct: 149 WSFMNLTGFRDTNTTFPAPKLYQLQKRDIYAEHFICCQEEIPYYGLNSLSRIERITSALR 208 Query: 166 DEEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVET------FAGTVCEY 215 D K+ +L K +I+ + E ++ + F GT+ Y Sbjct: 209 DGNKKIFLSNLVEKNVGHKINIHTMLWLEKGNSETKIVINKGIYASWKFVGTIQNY 264 >UniRef50_C4UL45 Putative uncharacterized protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UL45_YERRU Length = 280 Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 46/137 (33%), Positives = 80/137 (58%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 +++ +L W+E N+ SI + ++GYSRR ++L F + PLGEY+ +RR+ RAA+L Sbjct: 5 VVRYILSWVEENIYTGASIGKLVDETGYSRRTLELWFLKYSGFPLGEYLLRRRMSRAAML 64 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQK 136 +R+T S+L+++ HF S Q+F+R F+ G +P +YR +D W + + L+ Sbjct: 65 LRMTELSILEVSTMFHFYSSQNFTRSFRIFSGVTPTKYRKQDKWSVKLLQRPLLMEDTHN 124 Query: 137 TECRLINFPETPIFGNS 153 + PE + G+S Sbjct: 125 LKAEHCVLPELKLRGSS 141 >UniRef50_C8QFY6 Transcriptional regulator, AraC family n=3 Tax=Enterobacteriaceae RepID=C8QFY6_9ENTR Length = 142 Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 46/105 (43%), Positives = 71/105 (67%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M++++I+ L WI+ NL+ +SI+++A KSGYS+ ++Q +FR LG YIR+RRL Sbjct: 1 MMQEEIIHSLTHWIDQNLDKTLSIDEVAAKSGYSKWHLQRMFRTVTKQTLGGYIRERRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 AA +R T + + DIA+ +DSQQ+FSR F++ F +P YRH Sbjct: 61 LAAEALRQTQRPVFDIAMQYGYDSQQTFSRVFRRQFSQTPTAYRH 105 >UniRef50_C5BEG3 Transposon tn10 tetd protein (Orfr) n=2 Tax=Edwardsiella RepID=C5BEG3_EDWI9 Length = 122 Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 46/103 (44%), Positives = 69/103 (66%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q ++ L++WIE NL+ I I+DIA+++GYS+ +Q LF+ L Y+RKRRL RAA Sbjct: 8 QLLVDALIQWIEQNLDKRILIDDIAERAGYSKWYLQRLFKEVTGYSLAAYVRKRRLIRAA 67 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 ++ + K +++I L FDSQQ+FSR FK+ +G SP YR + Sbjct: 68 AELQRSNKKIMEIMLQYGFDSQQTFSRAFKRRYGTSPGSYRQQ 110 >UniRef50_B7LRE5 Putative uncharacterized protein n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LRE5_ESCF3 Length = 266 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 44/101 (43%), Positives = 64/101 (63%) Query: 20 QLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRL 79 + WI N+E PI++ED+ + SGYSRR++ LF + + EY+R +RL A L++L Sbjct: 3 NIFAWINKNIESPINVEDLVKISGYSRRHLHTLFMQYTGHSVAEYVRLKRLSYTAHLLKL 62 Query: 80 TAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 T S+LDI+L H+DS QSFSR FK+ + +P YR W Sbjct: 63 TNLSVLDISLRYHYDSPQSFSRVFKRYYQMTPLAYRRSQQW 103 >UniRef50_A8GHJ0 Transcriptional regulator, AraC family n=1 Tax=Serratia proteamaculans 568 RepID=A8GHJ0_SERP5 Length = 140 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/98 (47%), Positives = 66/98 (67%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + ++L+WIE NL ++I+ IA+KSGYSR +IQ LF+ + L +YIR RR+ AAI + Sbjct: 9 INEMLKWIEGNLGAELNIKTIAKKSGYSRFHIQRLFKLHAGLTLAQYIRMRRVTEAAIAL 68 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 R T + ++DIAL FDSQQ F+R FKK +P E R Sbjct: 69 RFTDRKIMDIALDYGFDSQQVFTRTFKKQLKTTPGELR 106 >UniRef50_A8G9B3 Transcriptional regulator, AraC family n=1 Tax=Serratia proteamaculans 568 RepID=A8G9B3_SERP5 Length = 292 Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 55/142 (38%), Positives = 80/142 (56%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M +Q+++ LL WIE NL+ P++++DIA KSGYS+ ++Q LF+ LG Y R+RRL Sbjct: 1 MYQQQVITALLAWIEQNLDQPLTLDDIAAKSGYSKWHLQRLFKELTGEILGTYARRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 AA +RLT + IA FDSQQ+F+R FKK FG P YR W + P + Sbjct: 61 AAARELRLTNHGVAFIADKYQFDSQQTFTRCFKKQFGMPPAGYRRSTDWSGLGMQPPLRL 120 Query: 132 RQQQKTECRLINFPETPIFGNS 153 + +I P + G++ Sbjct: 121 MDAPLPQAEIITLPAMQLIGHT 142 >UniRef50_B2VKB8 Regulatory protein SoxS n=1 Tax=Erwinia tasmaniensis RepID=B2VKB8_ERWT9 Length = 141 Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 43/100 (43%), Positives = 66/100 (66%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 I+ L WI+ NL +SI+++A KSGYS+ ++Q +FR LG YIR+RRL AA Sbjct: 5 IINTLTHWIDNNLGKNLSIDEVAAKSGYSKWHLQRMFRTVTKQTLGGYIRERRLTLAAEA 64 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 +R + + + DIA+ +DSQQ+FSR F++ F +P +YR+ Sbjct: 65 LRQSHRPVFDIAMQYGYDSQQTFSRVFRRQFSQTPTDYRN 104 >UniRef50_P26950 F1 operon positive regulatory protein n=19 Tax=Yersinia pestis RepID=CAF1R_YERPE Length = 301 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/166 (36%), Positives = 99/166 (59%), Gaps = 8/166 (4%) Query: 12 MIRQKILQQLLEWIECNLEHP-ISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 M++Q + ++++IE NLE I+I+ + SG+SRR +Q+ F+ ++ +P+G YIR RR Sbjct: 1 MLKQMTVNSIIQYIEENLESKFINIDCLVLYSGFSRRYLQISFKEYVGMPIGTYIRVRRA 60 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFL 130 RAA L+RLT ++++I+ L +DSQQ+F+REFKK+FG +PR+YR +W F L Sbjct: 61 SRAAALLRLTRLTIIEISAKLFYDSQQTFTREFKKIFGYTPRQYRMIPFWS----FKGLL 116 Query: 131 IRQQQKTEC---RLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRR 173 R++ E R+ E I G F + V D + +L + Sbjct: 117 GRREINCEYLQPRICYLKERNIIGQCFNFRDLVFYSGIDSKCRLGK 162 >UniRef50_C8QA11 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QA11_9ENTR Length = 132 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 66/105 (62%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 I + QLL WIE N+E + +E +AQ++GYS+ ++Q LFR++ + LG YIR+R+L Sbjct: 3 INVAFIHQLLLWIEANIEQKLILETVAQRAGYSQWHLQRLFRSYTGIALGSYIRERKLTA 62 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + I + ++ IAL FDSQQ++ R F+++F P +R + Sbjct: 63 SVIALLTDNTPLMHIALQFGFDSQQTYCRTFRRMFNLPPGAFRRK 107 >UniRef50_A2TEG4 AraC-like protein (Fragment) n=1 Tax=Serratia marcescens RepID=A2TEG4_SERMA Length = 122 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 44/83 (53%), Positives = 56/83 (67%) Query: 42 SGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSR 101 SGYS+ ++Q +FR+ LG YIR+RRL +AA +R T + +LDIAL HFDSQ SFSR Sbjct: 1 SGYSKWHLQRMFRSTTGHALGSYIRERRLSQAAQALRSTPRPILDIALQYHFDSQPSFSR 60 Query: 102 EFKKLFGCSPREYRHRDYWDLAN 124 FKK FG +P YR WD+A Sbjct: 61 AFKKQFGKTPAVYRRTTRWDVAE 83 >UniRef50_B2VHH7 Putative transcriptional regulator n=1 Tax=Erwinia tasmaniensis RepID=B2VHH7_ERWT9 Length = 110 Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 45/109 (41%), Positives = 71/109 (65%), Gaps = 2/109 (1%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 ++ +I+ +++WIEC++E ++IE +A KSGYS+ ++Q F+ + L +IR RRL + Sbjct: 1 MKNEIVDVIVDWIECHIEEGLNIEAVAAKSGYSKWHLQRAFKAQKGITLATFIRGRRLEQ 60 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY--RHRDY 119 AA + + KS++ I+ L F SQQ F R FKK F +PR+Y RHR Y Sbjct: 61 AAQSLVNSTKSIMAISTELGFSSQQCFQRVFKKHFHITPRDYRIRHRQY 109 >UniRef50_A4WA37 Transcriptional regulator, AraC family n=3 Tax=Enterobacteriaceae RepID=A4WA37_ENT38 Length = 120 Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 39/98 (39%), Positives = 68/98 (69%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + LL+WI+ NL+ + IE +A++SGYS+ ++Q LF+ PL YIR ++L ++ + Sbjct: 7 MHDLLDWIDNNLDSRLDIESVARRSGYSKWHLQRLFKEHTGYPLAGYIRAQKLQKSVERL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + + +L++A++L FDSQQSF+R FK+L+G +P +R Sbjct: 67 THSDEPILNVAIALGFDSQQSFNRSFKRLYGQAPGAWR 104 >UniRef50_Q48413 Transcriptional activator ramA n=51 Tax=Bacteria RepID=RAMA_KLEPN Length = 113 Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 43/103 (41%), Positives = 65/103 (63%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 I +++ ++EWI+ NL P+ I+DIA+ +GYS+ ++Q LF + LG YIR+R+L Sbjct: 3 ISAQVIDTIVEWIDDNLHQPLRIDDIARHAGYSKWHLQRLFLQYKGESLGRYIRERKLLL 62 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 AA +R T + + DI L FDSQQ+F+R F + F P YR Sbjct: 63 AARDLRDTDQRVYDICLKYGFDSQQTFTRVFTRTFNQPPGAYR 105 >UniRef50_Q52620 Regulatory protein pqrA n=6 Tax=Enterobacteriaceae RepID=PQRA_PROVU Length = 122 Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 44/105 (41%), Positives = 68/105 (64%), Gaps = 2/105 (1%) Query: 13 IRQKILQQLLEWIECNLE--HPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 + + ++ +L+W+E L+ I I+ IA KSGYS+ ++Q +F++F LGEY+RKRRL Sbjct: 1 MAENVVNDILKWLETQLQRNEGIKIDTIANKSGYSKWHLQRIFKDFKGCTLGEYVRKRRL 60 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 AA ++ S+LDIAL F SQ +F+R FKK F +P ++R Sbjct: 61 LEAAKSLQEKDMSILDIALMYGFSSQATFTRIFKKHFNTTPAKFR 105 >UniRef50_D0ZAS7 Transcriptional regulator, AraC family n=2 Tax=Edwardsiella RepID=D0ZAS7_EDWTE Length = 135 Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 40/104 (38%), Positives = 67/104 (64%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + L WI+ N+ S++D+A ++GYS+ ++Q +F+ V LGEYIR ++L Sbjct: 19 MYNTDFISALRTWIDSNVAAISSLDDVAARAGYSKWHLQRMFKAHTGVRLGEYIRNKKLD 78 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +A +++ S+LDIALS+ FDSQ+SF+R FK+ F +P ++ Sbjct: 79 ESARRLKVCQGSILDIALSMGFDSQRSFTRSFKRRFDVTPGVWK 122 >UniRef50_C8QG57 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QG57_9ENTR Length = 164 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 9/125 (7%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 + ++ + +WI NL+ +SI+DIAQKSGYS+ +Q LF + L YIRK++L Sbjct: 8 EGVILAVTDWIVENLDQRLSIDDIAQKSGYSKWYLQKLFARCHNETLARYIRKKKLAACV 67 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQ 134 + ++ + +++ +A+ HF+SQQSF+R FK++ GC+P R + RQQ Sbjct: 68 VELKNSEATIISLAVKYHFESQQSFTRSFKQMMGCTPLSCRKKQLSGE---------RQQ 118 Query: 135 QKTEC 139 Q +C Sbjct: 119 QLADC 123 >UniRef50_A8GD44 Transcriptional regulator, AraC family n=9 Tax=Enterobacteriaceae RepID=A8GD44_SERP5 Length = 118 Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 38/98 (38%), Positives = 66/98 (67%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + L+EWI+ NLE + I +A ++GYS+ ++Q +F+ LGEYIR ++L +A + Sbjct: 7 ITDLIEWIDNNLEEKLDINTVAGRAGYSKWHLQRMFKRQTGYALGEYIRMQKLRVSAERL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + + ++ +A+SL FDSQQSF+R FK+ +G +P ++R Sbjct: 67 ANSGEPIVSVAISLGFDSQQSFNRSFKRHYGQTPGDWR 104 >UniRef50_B2Q528 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q528_PROST Length = 117 Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 65/103 (63%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 IR+ ++Q +L WI+ N++ P++I +I+ ++GYS+ Q +F+N + V LG+Y+ RL + Sbjct: 6 IRENVIQDILLWIDMNVDKPLNIAEISHRAGYSKWYFQRIFKNTVGVSLGQYLLINRLLK 65 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + ++ T ++DIA FD QQ +R FK+ +P +YR Sbjct: 66 VSSDLKQTNDKIIDIAFRYGFDGQQGLTRAFKRKLKVTPAKYR 108 >UniRef50_B8CLS6 Transcriptional regulator, AraC family n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CLS6_SHEPW Length = 303 Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 43/100 (43%), Positives = 66/100 (66%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 ++++L +I +L+ P+S+EDIA+ S SR +Q +F+ + + +Y+R+ +L AA V Sbjct: 10 IERVLNFIHTHLDQPLSLEDIAEHSQCSRWQLQRIFQQQTGLNVAQYVRELKLSIAADKV 69 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 MLDIA L F+S+ SFSR FK+LFG SPREY+ R Sbjct: 70 LSGQSRMLDIAYELGFNSEVSFSRSFKQLFGVSPREYQRR 109 >UniRef50_D1ARB2 Transcriptional regulator, AraC family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ARB2_SEBTE Length = 285 Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 43/100 (43%), Positives = 61/100 (61%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L LE+IE NLE+ + I+ IAQ S N+Q +F V LGEYIR RRL +AA+ + Sbjct: 7 LNNALEYIENNLENDVKIKKIAQICLCSEYNVQRVFSIISGVTLGEYIRNRRLSKAAVDI 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 R T ++DIA +++S +FS+ FK G SP++ R R Sbjct: 67 RETNMRIIDIAFKYNYESADAFSKAFKNFHGISPKDGRVR 106 >UniRef50_A6LYZ8 Transcription activator, effector binding n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYZ8_CLOB8 Length = 290 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 65/104 (62%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M ++I+ + + +IE NL P+++E +A YS + F+ M +G YIR RRL Sbjct: 1 MKDKQIIGRAIIFIETNLYEPLTVESVASAVSYSYYHFHRYFQVVMGETIGSYIRSRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +AA + + K +LDIA+ L+F+S +SF+R FKK +G +P EYR Sbjct: 61 QAAYNLVHSKKRILDIAILLYFESAESFTRAFKKRYGITPMEYR 104 >UniRef50_A6VR73 Helix-turn-helix-domain containing protein AraC type n=2 Tax=Marinomonas RepID=A6VR73_MARMS Length = 306 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 39/100 (39%), Positives = 65/100 (65%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 ++++L++I NL+ I + +A+KS +SR Q +F + + +YIR+ RL +AA L+ Sbjct: 10 IEKVLDYIHENLDESIHVSSLAEKSCWSRWQFQRVFGQATGLSVAQYIRELRLSKAAELL 69 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + +DIA+ FDS+ SFSR FK++F C+PR+YR R Sbjct: 70 LSSKNRHVDIAIQCGFDSEISFSRAFKQMFNCTPRDYRQR 109 >UniRef50_C6CRA3 Transcriptional regulator, AraC family n=8 Tax=Bacillales RepID=C6CRA3_PAESJ Length = 297 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 40/98 (40%), Positives = 63/98 (64%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +Q + +IE L+ +S+E IA ++G+S + Q LF + EYIRKRRL RAA + Sbjct: 17 IQYAITFIEEQLQEALSLEAIAIRAGFSLYHFQRLFHAITGFTVQEYIRKRRLSRAAEEL 76 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 R+T ++LDI++S + SQ++F+R F FG +P +YR Sbjct: 77 RVTRHTVLDISVSYQYGSQEAFTRAFAGYFGMAPAQYR 114 >UniRef50_D1NY75 Multiple antibiotic resistance protein MarA n=5 Tax=Enterobacteriaceae RepID=D1NY75_9ENTR Length = 123 Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 2/106 (1%) Query: 13 IRQKILQQLLEWIECNLE--HPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 + + ++ +++ W+E L+ I I+ IA KSGYS+ ++Q +F+ LGEY+RKRRL Sbjct: 1 MSESVVNEIIRWLESQLQRNEGIKIDTIADKSGYSKWHLQRVFKELKGCTLGEYVRKRRL 60 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 AA +R +LDIAL F SQ +F+R FKK F +P ++R Sbjct: 61 LEAAKSLREGNLPILDIALQYGFSSQATFTRIFKKHFDTTPAKFRQ 106 >UniRef50_A7GBT6 Transcriptional regulator, AraC family n=13 Tax=Clostridium RepID=A7GBT6_CLOBL Length = 289 Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 39/100 (39%), Positives = 60/100 (60%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 K L++ + +IE NL + ED+A+ GYS + LF + +G YIRKR++ + A Sbjct: 5 KSLEKAIMYIEENLNQDLKTEDVAKSIGYSYYHFTRLFEGLLGETIGNYIRKRKITKTAQ 64 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + T K ++DIAL F S ++F+R FKK++ SP EYR Sbjct: 65 DLIYTDKRIIDIALDFQFKSPEAFARAFKKIYDISPTEYR 104 >UniRef50_A8FAK9 Transcriptional regulator n=3 Tax=Bacillus RepID=A8FAK9_BACP2 Length = 290 Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 39/98 (39%), Positives = 65/98 (66%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +Q +E+IE NL++ ISI++I+ KS +S + Q LF+ + EYIR RRL AA L+ Sbjct: 7 IQHSIEFIEENLQNNISIKEISSKSCFSAFHFQRLFQAITGFSVQEYIRNRRLSEAARLL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + T +++L IA++ + SQ++F+R F + FG +P +R Sbjct: 67 KETKQNVLHIAIAFQYGSQEAFTRAFVQFFGVTPGRFR 104 >UniRef50_B4D591 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D591_9BACT Length = 310 Score = 79.7 bits (195), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 70/111 (63%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 +++ ++ +R IL+ + +++ NL ++I DIA + GYS +++ +FR+ + V LG+Y Sbjct: 184 RDIHSSDDVRDVILESINKYVRANLGRAVTIADIAGELGYSVSHLRAVFRDRLGVSLGKY 243 Query: 65 IRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +R+ RL AA L++ + ++ DI F+S +FSR F+K +G PR YR Sbjct: 244 MRESRLSEAAQLLQSSGLNVSDIGERCGFESLYAFSRAFRKAYGIPPRTYR 294 >UniRef50_P0ACH6 Multiple antibiotic resistance protein marA n=133 Tax=Bacteria RepID=MARA_ECO57 Length = 127 Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 63/98 (64%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + +L+WIE NLE P+S+E ++++SGYS+ ++Q +F+ LG+YIR R++ A + Sbjct: 11 IHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKL 70 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + + + +L +A F+SQQ+ +R FK F P +YR Sbjct: 71 KESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYR 108 >UniRef50_A9KM10 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KM10_CLOPH Length = 136 Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 67/98 (68%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + ++ ++IE N + I+++DIA+ GYS+ ++ +F + + +YI +RRL AA L+ Sbjct: 5 ISKVKKYIEENFKDDITLDDIAKNVGYSKYHLNRMFLENTGLTIHKYICERRLTEAADLL 64 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 T +S++DIALS+ + SQQ+F+ FK++F C+P +YR Sbjct: 65 LYTDQSIVDIALSIGYTSQQAFTLAFKQMFDCTPYKYR 102 >UniRef50_Q2B3U5 Transcriptional regulator (AraC/XylS family) protein n=2 Tax=Bacillus RepID=Q2B3U5_9BACI Length = 297 Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 38/99 (38%), Positives = 65/99 (65%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 I+Q+ +E IE +L +S++ IAQ +G+S+ + +F+ + V + EYIR RR+ +A + Sbjct: 9 IIQKSIEHIESSLHEDLSLDHIAQTAGFSKFHYHRIFQKEVGVTVSEYIRYRRIANSAHM 68 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + T + +LDIAL F+SQ++F+R FKK + P +YR Sbjct: 69 LLYTDEKILDIALYFQFESQEAFTRSFKKYYHLPPGKYR 107 >UniRef50_C8P3F6 ARAC-type regulatory protein n=2 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P3F6_ERYRH Length = 395 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 5/111 (4%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 ENEM + ++ +I+ N+ P+S+EDI + SR +QLLF + +P +YI ++ Sbjct: 283 ENEM-----MDEIYTYIQANIHRPLSVEDICNQFAISRSALQLLFNKYFDMPPKQYINEQ 337 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 +L RA L+ + D+AL L F S FSR+FK+ FG +P EY + Y Sbjct: 338 KLERAKHLILEGKYPITDVALKLGFSSIHYFSRKFKQHFGFAPSEYAQKIY 388 >UniRef50_A6M0I1 Helix-turn-helix-domain containing protein, AraC type n=2 Tax=Clostridium RepID=A6M0I1_CLOB8 Length = 127 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 64/98 (65%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +++ +E+IE NL I ++++A K+ S+ + +F + + P+ EYIRK+RL AA + Sbjct: 7 IKKSIEYIENNLNKKIQLKELADKAFLSKYHFHRVFHSVVGEPVAEYIRKKRLEEAANEL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 T ++DIAL F +Q+SF++ FKKL+G P+E+R Sbjct: 67 LTTENKIIDIALKYQFSNQESFTKAFKKLYGIPPKEFR 104 >UniRef50_C5EQJ6 AraC-family transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQJ6_9FIRM Length = 289 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 68/102 (66%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 +I+Q+++++I+ +LE + E I++++GYSR ++ +F + + L YI++RRL AA Sbjct: 6 QIIQEVVDYIDSHLEDRLDAESISRQAGYSRYHLSRMFTSITGLSLHTYIQRRRLTEAAR 65 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + T + ++DIALS + SQQ+F+ F+ LF +PR +R + Sbjct: 66 QLVFTDRPVMDIALSAGYGSQQAFTVGFRALFRTTPRAFRKK 107 >UniRef50_C8QF79 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QF79_9ENTR Length = 109 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/102 (43%), Positives = 62/102 (60%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 R++I++ L WI+ NL SIED+A +SGYSR +IQ +F+ V + Y+R+RRL RA Sbjct: 4 REQIIEDLTHWIDLNLHAVHSIEDVAARSGYSRWHIQHMFKQVNRVSILAYVRQRRLERA 63 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 A + +S+ IAL F SQQ+FSR F K P +R Sbjct: 64 AKDLTEGQESISAIALRHGFGSQQAFSRAFIKWQKMKPSTFR 105 >UniRef50_D1P760 F1 operon positive regulatory protein n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P760_9ENTR Length = 292 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/124 (42%), Positives = 78/124 (62%), Gaps = 13/124 (10%) Query: 12 MIRQKILQQLLEWIECNLE-HPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 MI+ I+ + ++IE N+E I IE + SGYSRR +Q +F+N + +G+YI+ RR+ Sbjct: 1 MIKNLIVNSVTQYIEENIEIKHIDIEGLVSYSGYSRRYLQKIFKNKIGFSIGKYIQLRRI 60 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR------------HRD 118 RAA+L+RLT+ S+ I+ L +DSQQ+F+REFKK G +P +YR HRD Sbjct: 61 SRAAVLLRLTSLSLSSISTRLCYDSQQTFTREFKKNTGYTPLQYRNNKLLTFQGMIGHRD 120 Query: 119 YWDL 122 DL Sbjct: 121 TNDL 124 >UniRef50_B5EUU0 Transcriptional regulator, AraC family n=3 Tax=Aliivibrio RepID=B5EUU0_VIBFM Length = 299 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/100 (38%), Positives = 67/100 (67%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 ++ +L +I N++ P+++E +A+ S +SR +Q +F+N+ + + +Y+R++RL +A+ V Sbjct: 14 IENILVFIHQNIDKPLTVEILAEMSCWSRWQLQRVFQNYTGMNVAQYVREQRLSMSALEV 73 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 K MLDIA S F S+ +FSR FK+ F SPREY+ + Sbjct: 74 LDKKKRMLDIAYSYGFTSEIAFSRAFKQYFHKSPREYQKQ 113 >UniRef50_Q9K6U1 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9K6U1_BACHD Length = 300 Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 62/98 (63%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +Q+ +++IE +L PIS+E +A + YS + LF+ + + EYI++RRL +AA + Sbjct: 7 VQRAIDYIETHLHEPISLEKVAAHASYSYFHFHRLFKATVGCTMSEYIKRRRLTKAAYAL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 T S++DIA ++SQ++F+R FK+ F P +YR Sbjct: 67 LETKASIIDIAFEYGYESQEAFTRAFKQWFNVLPGKYR 104 >UniRef50_A9KR18 Transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=A9KR18_CLOPH Length = 301 Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/99 (39%), Positives = 57/99 (57%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + L++IE NL I +AQK+ S N Q +F VP+ EYIR+RRL +AAI + Sbjct: 7 MNAALDYIENNLTEDIDFTIVAQKACCSSYNFQRMFSFITDVPIAEYIRRRRLTQAAIEL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 + T ++D+AL +DS SFSR F + G +P E + Sbjct: 67 QNTNAKVIDVALKYGYDSTVSFSRAFSNIHGITPNEAKQ 105 >UniRef50_C9NSU9 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NSU9_9VIBR Length = 310 Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 38/98 (38%), Positives = 66/98 (67%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + ++L +I ++ P+S++DIA++S +SR +Q +F+ + + Y+R+ +L +AA + Sbjct: 17 ISKVLSFIHQHISEPLSLDDIARQSCWSRWQLQRVFQTETGMAVATYVRELKLSQAAERL 76 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 T+ ++DIAL L F S+ SFSR FK++FG SPR YR Sbjct: 77 IDTSDRVIDIALELGFSSEISFSRSFKQVFGLSPRAYR 114 >UniRef50_B8FSY0 Transcriptional regulator, AraC family n=6 Tax=Clostridiales RepID=B8FSY0_DESHD Length = 291 Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 63/105 (60%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M +K L+ + +IE +L I +ED+A+ +GYS ++ F + +G YI+KRRL Sbjct: 1 MDYRKALEHAVMYIENHLGSDIKVEDVAKAAGYSYYHLNRQFTAILGESIGSYIKKRRLA 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 AA + T + ++DIA+ F+S ++FSR FK ++ SP+ YR Sbjct: 61 DAAKKILYTNRKIIDIAMENGFESPEAFSRAFKAIYKVSPQTYRQ 105 >UniRef50_A6TN59 Helix-turn-helix-domain containing protein, AraC type n=7 Tax=Clostridia RepID=A6TN59_ALKMQ Length = 303 Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 62/99 (62%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +Q++ ++IE NL PI++ D+A+ +GYS+ + +F+ EY+R RL +AA+L+ Sbjct: 10 VQRMQDYIEQNLNCPITLSDLAKVAGYSQWHSARIFKELTGKAPFEYMRALRLTKAALLL 69 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 R ++D+A FDS + F+R F K FG SP++Y + Sbjct: 70 RDKRTKVIDVAFDFVFDSHEGFTRAFSKQFGVSPKKYSN 108 >UniRef50_A4BGH9 Regulator of melibiose operon n=1 Tax=Reinekea blandensis MED297 RepID=A4BGH9_9GAMM Length = 289 Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 68/114 (59%) Query: 4 DKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGE 63 D + E + + +Q +LE+I N + PI++ D+A+ + +F+N + +P+ + Sbjct: 174 DDSVKEKRTSQSQKIQAMLEFIASNYKQPIAVTDVAEHVHLHPKYAMQMFKNLIGIPMKQ 233 Query: 64 YIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 YI + RL A L+R T +S++DIAL++ F+S F F++ C+P+E+R+R Sbjct: 234 YINRMRLMTAKDLLRDTERSIMDIALTVGFNSNNRFYIVFRQYEQCTPKEFRNR 287 >UniRef50_UPI0001A4290C hypothetical protein PcarcW_09175 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A4290C Length = 126 Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 65/103 (63%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 ++ +I++ L WIE NLE+ + I+ ++ KSG+S+ ++Q +F +P+G YIR RRL Sbjct: 3 LQAEIIKDLRLWIESNLENDLVIDAVSSKSGFSKWHLQRIFVQETGIPIGRYIRNRRLQL 62 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 A+ + +T ++ DI L F +QQ+F+R F + F P ++R Sbjct: 63 ASEELAVTKNTISDIPLKYGFSNQQAFTRTFTRHFRMPPGQWR 105 >UniRef50_C0CY04 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0CY04_9CLOT Length = 295 Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 38/98 (38%), Positives = 62/98 (63%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L++ +E+IE +L+ I + D++++ GYS ++ LF + P+G YI +RRL RAA + Sbjct: 14 LERAIEYIETHLDENIDLGDVSREMGYSYYHMTRLFSAVLGEPVGRYISRRRLYRAAQQL 73 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + + ++DIAL F S ++FSR FK LF +P YR Sbjct: 74 VHSDRRIIDIALESGFQSPEAFSRAFKALFKTTPAGYR 111 >UniRef50_D2BST7 Transcriptional regulator, AraC family n=2 Tax=Enterobacteriaceae RepID=D2BST7_DICD5 Length = 113 Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 66/105 (62%), Gaps = 1/105 (0%) Query: 12 MIR-QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 MI+ ++++ ++++WI+ N+ +SI+D+A +SGYS+ ++Q +F + YIR ++L Sbjct: 1 MIKLEELITEIIQWIDDNIHQQLSIDDVAARSGYSKWHLQRVFFQKNGKNIAAYIRDKKL 60 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 AA + + +LDI FDSQQSF+R F K + P++YR Sbjct: 61 ALAAYDLVESKDRVLDIGFRYGFDSQQSFTRSFSKKYSIPPQKYR 105 >UniRef50_A6D8X3 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D8X3_9VIBR Length = 295 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 67/98 (68%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +++++++I NL+ P+++ ++A S +SR +Q +F+ + L +Y+R+++L RAA + Sbjct: 13 VEKIVDYIHQNLDKPLTVTELADISCWSRWQLQRVFQEQTNHNLAQYVREQKLSRAAEQL 72 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + + + DIAL F+S+ SFSR FK+LF SPR+YR Sbjct: 73 LKSDQKVTDIALDFGFNSEVSFSRAFKQLFAISPRQYR 110 >UniRef50_C1FNH9 Transcriptional regulator, AraC family n=11 Tax=Clostridiaceae RepID=C1FNH9_CLOBJ Length = 129 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 5/117 (4%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 K ++ ++ WIE N+ ++ +++ GYS F + + +YI KRRL AAI Sbjct: 4 KTIENMVNWIEDNIMRNPTLTEMSNYVGYSPFYCSSKFHENIGITFKQYISKRRLSLAAI 63 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDL-----ANIFP 127 V+ T LDIAL F SQ++F+R F +GC+P EYR + ++ NIFP Sbjct: 64 KVKDTKVRFLDIALKYGFSSQEAFTRAFVSNYGCTPNEYRKKRLTNIELYMKPNIFP 120 >UniRef50_B8K3P3 Transcriptional activator n=2 Tax=Vibrio RepID=B8K3P3_VIBPA Length = 306 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 66/98 (67%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + ++L +I +L+ P+S+++IA +S +SR +Q +F+ + + Y+R+ +L AA L+ Sbjct: 14 ISKVLGFIHRHLDTPLSLDEIAAQSCWSRWQLQRVFQAETGLTVANYVRQLKLSLAAELL 73 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 T + ++DIAL+ F+S+ +FSR FK+ F CSPR YR Sbjct: 74 LDTDQRVIDIALATGFNSEIAFSRAFKQFFACSPRVYR 111 >UniRef50_B7JL95 Transcriptional regulator, AraC family n=54 Tax=Bacillus cereus group RepID=B7JL95_BACC0 Length = 299 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 67/101 (66%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 ++++++ +E+IE +L ++ E +A S S + +F+ ++ + + +YIRKRRL AA Sbjct: 6 KEMIKKAIEYIENHLHEELTTERVASHSAVSMYHFHRIFQRYIGMSVTDYIRKRRLTHAA 65 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 ++ T ++++DIA+ F SQ++F+R FK++F P++YR Sbjct: 66 QVLVSTERAVIDIAMQYGFSSQEAFTRAFKRMFQLPPKKYR 106 >UniRef50_A1ZSG3 Transcriptional regulator, AraC type, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZSG3_9SPHI Length = 292 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 62/105 (59%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L+ LL +E N P+S ++A + YS RNI +FR H +G YI++ L AA + Sbjct: 10 LRSLLNLLENNFTKPLSSSEVAAATFYSYRNINRIFRAVFHKSIGRYIKELLLQEAARRL 69 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDL 122 + K++ DIA L++ Q+F++ F++ F CSP ++R ++ D+ Sbjct: 70 AYSDKAITDIAFELNYSDLQAFNKAFRREFDCSPSQFRQQEKKDM 114 >UniRef50_C8Q9G3 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8Q9G3_9ENTR Length = 144 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 64/109 (58%), Gaps = 2/109 (1%) Query: 8 TENEMIRQKILQQLLEWIECNL-EHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 T ++MI ++ ++ WIE +L + I + I KSGY + Q +FR LGEY+R Sbjct: 17 THDKMI-YSVVDDIIHWIEEHLYDETIRVSTITGKSGYGHWHFQRIFREVTGYNLGEYMR 75 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 RR+ RA + + K++L+IA++ F SQQ+F+R +KK +P E R Sbjct: 76 LRRVIRATFAIIHSEKTLLEIAVANGFTSQQTFTRVYKKYMHATPGEIR 124 >UniRef50_C5BDV7 Transcriptional regulator, AraC family n=45 Tax=Enterobacteriaceae RepID=C5BDV7_EDWI9 Length = 132 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 40/95 (42%), Positives = 59/95 (62%) Query: 21 LLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLT 80 L EWIE +L I ++++A+ SGYS ++Q +FR + LG YIR R+L AA +R + Sbjct: 14 LSEWIERHLGRDIYLDELARYSGYSLWHMQKIFRETTGMSLGRYIRLRKLTGAARRLRHS 73 Query: 81 AKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + ++DIAL F SQ F+ F+K FG +P YR Sbjct: 74 DEGIIDIALCYGFASQSHFTYMFRKHFGMTPTRYR 108 >UniRef50_A4BA46 Transcriptional regulator, AraC family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BA46_9GAMM Length = 293 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/100 (37%), Positives = 62/100 (62%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L QLL++I ++ P+S++ +A +S +SR +Q +F + + +Y+R+ +L AA + Sbjct: 10 LDQLLDYIHRHIHEPMSLDTLAAQSAWSRWQLQRVFVAYTGYTVAQYVRELKLSLAADCL 69 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + +LDIALS F S+ +FSR FK+ F SP +YR R Sbjct: 70 LENSDRVLDIALSFGFGSEVAFSRAFKQFFKVSPHQYRKR 109 >UniRef50_B7VRB4 Transcription activator n=6 Tax=Vibrionales RepID=B7VRB4_VIBSL Length = 290 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 60/94 (63%) Query: 22 LEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTA 81 + +I NL +S+ED+A +S +SR +Q +F+ + + Y+R+ +L +AA + Sbjct: 1 MAYIHANLSSALSLEDLATQSCWSRWQLQRVFQAETGLTVANYVRELKLSQAAEELLDGK 60 Query: 82 KSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 ++DIAL L F+S+ SFSR FK++FG SP +YR Sbjct: 61 DRVIDIALGLGFNSEISFSRSFKQMFGVSPSQYR 94 >UniRef50_A8FAK8 Possible AraC family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FAK8_BACP2 Length = 295 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 64/101 (63%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 +K +Q+ L +IE +L+ + ++ +A+ +GYSR + +F+ + + +Y+R+RR+ +AA Sbjct: 7 EKTIQETLNYIEQHLKDDLPLQTLAKHAGYSRFHFHRIFKKVIKKSVVDYLRERRMTQAA 66 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + T + +DIA F SQ+SF+R FKK++ SP YR Sbjct: 67 KDLIHTDQRAIDIAFQYRFSSQESFTRAFKKIYDMSPARYR 107 >UniRef50_A4B9Y7 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4B9Y7_9GAMM Length = 297 Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 61/98 (62%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +Q L++ IE NL +++ +A S + Q F++ + LG YIR RRL RAA L+ Sbjct: 8 IQTLVDRIEANLADDVNVLGLADAFHMSPWHFQRTFKSLIGDTLGGYIRGRRLTRAAQLL 67 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + +S++DIA+S+ F+S ++FSR FK F +P+ +R Sbjct: 68 LESRRSVIDIAVSVGFNSHEAFSRSFKAYFNVTPKAFR 105 >UniRef50_C3LC07 Transcriptional regulator, AraC family n=7 Tax=Bacillus RepID=C3LC07_BACAC Length = 296 Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 89/154 (57%), Gaps = 14/154 (9%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +Q+ +++IE ++ ++ ++A+ +G+S + +F+ + + EY+RKRRL RAA + Sbjct: 8 IQRSIDYIEEDVMEKQTLRNLARIAGFSESHFHRVFQALVGDTVMEYVRKRRLARAAYQL 67 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQ-- 135 T + ++DIA F S ++F+R FKKLF +P EYR ++ ++ S ++Q++ Sbjct: 68 SHTDEKIIDIAFEHGFQSHETFTRAFKKLFQMTPSEYRKQEIE--TPMYYSVNVKQRKLN 125 Query: 136 ------KTECRLINFPETPIFGNSFKYDIEVSNK 163 + E R++N PE + G Y+++ ++K Sbjct: 126 PYLGGIQMEYRIVNKPEFLMAG----YELKTTSK 155 >UniRef50_A8MLY7 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MLY7_ALKOO Length = 308 Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 61/101 (60%), Gaps = 1/101 (0%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 + I+ L++IE N+ PI EDIA+ +GYS + +F+ M +P+ EY+++R+L RA+ Sbjct: 7 KTIIFNSLKYIETNINEPIMAEDIAKNAGYSLYHFSRMFKKQMGLPIMEYVKERKLIRAS 66 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + + K ++D AL+ + S F++ FK FG SP R Sbjct: 67 EEI-VNGKKIIDTALNYGYQSHSGFTKAFKNKFGFSPALLR 106 >UniRef50_A0KJN2 Transcriptional activator n=5 Tax=Gammaproteobacteria RepID=A0KJN2_AERHH Length = 325 Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 65/101 (64%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 ++++L++I NL+ P+ + ++A++S +SR +Q +F + + + Y+R+ +L +AA + Sbjct: 47 IERVLDYIHANLDLPLGLAELAEQSCWSRWQLQRVFLHETGLTVAHYVRELKLSQAAEAL 106 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 + +LD+AL F S+ SFSR FK+ FGCSP YR R Sbjct: 107 LSGRQRVLDLALCYGFGSEVSFSRAFKQQFGCSPLAYRKRG 147 >UniRef50_Q180J9 AraC-family transcriptional regulator n=4 Tax=Clostridium difficile RepID=Q180J9_CLOD6 Length = 160 Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 76/124 (61%), Gaps = 1/124 (0%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 ++ +++++IE NL ++++ IA + YS+ ++ +F N + + +YI++RRL AA Sbjct: 7 VIMEIIDYIEENLTENLNLDKIAYIANYSKYHLHRMFTNVVGCTIHQYIQRRRLTEAARQ 66 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD-YWDLANIFPSFLIRQQQ 135 + T K ++DIA+++ + + QSF+ F+ L+ SP+ YR++D ++ + F L Q Q Sbjct: 67 LIFTDKYIIDIAITVGYSTHQSFTLAFRNLYKESPQVYRNKDEFYPIQQRFVLNLNHQIQ 126 Query: 136 KTEC 139 +C Sbjct: 127 SEKC 130 >UniRef50_Q18D16 AraC-family transcriptional regulator n=6 Tax=Clostridium difficile RepID=Q18D16_CLOD6 Length = 303 Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 38/98 (38%), Positives = 59/98 (60%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +Q L+ IE NL ISI ++A K+ S Q LF+ ++ + EYI+ RRL RA+ + Sbjct: 7 IQITLDLIEANLSEEISINELANKANLSPFYYQRLFKRLVNKTVMEYIKLRRLARASEYL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +LD+AL+ F S ++F+R FKK +G +P +YR Sbjct: 67 AEHKNRILDVALNFGFASHETFTRSFKKAYGLTPEKYR 104 >UniRef50_A6FJ46 Uncharacterized protein conserved in bacteria n=1 Tax=Moritella sp. PE36 RepID=A6FJ46_9GAMM Length = 312 Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 62/97 (63%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + +LL++I N++ P+S+E +A KS +SR +Q +F + + L +Y+R+ +L AA + Sbjct: 15 IGKLLDFINENIDQPLSVEQLADKSCWSRWQLQRVFHHETGLNLAQYVRELKLSLAAEQL 74 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY 114 + ++DIAL+L F S+ SFSR FK +F SP Y Sbjct: 75 LGSKSRVVDIALALGFSSEVSFSRTFKNMFAYSPMAY 111 >UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS52_9FIRM Length = 300 Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 58/100 (58%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 ++ +L WI+ NL+ I++ IA + R Q +F ++H EY+++RR+ AA L+ Sbjct: 195 IKDMLGWIDRNLKDEITVSGIAGSANICVRECQRIFSQYVHYRPMEYVQRRRITLAAELL 254 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 R T + + DIAL F S F ++FK + GC+P YR + Sbjct: 255 RTTHRQVTDIALECGFSSVSYFIKQFKNIVGCTPTGYRKK 294 >UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=Clostridiales RepID=C4ZBY6_EUBR3 Length = 280 Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 64/99 (64%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +++ + +IE N ++ ISIEDIA G +R + +F+N + E++ R+ +A L+ Sbjct: 179 IKEAMNYIEQNFQNDISIEDIAGVCGINRSYLGKIFKNSVGHSPQEFLMNYRMIKATELL 238 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 +LT+ S+ D+ ++ +++Q FSR FK ++G +PRE+R+ Sbjct: 239 KLTSLSIADVGSAVGYENQLHFSRAFKNIYGVAPREWRN 277 >UniRef50_A9KJQ6 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A9KJQ6_CLOPH Length = 265 Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 58/105 (55%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M QK + +++IE NL +++ A G S Q +F H+PL EYIR+R+L Sbjct: 1 MDWQKGMNSAIDYIEKNLTGNVNVRTAAGFVGCSTWEFQRIFSFLTHIPLSEYIRQRKLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 AA ++ ++DIAL ++S +FSR F KLFG +P R+ Sbjct: 61 LAAQEIKDNDVKIIDIALKYGYESPAAFSRAFNKLFGIAPSSVRN 105 >UniRef50_A7JZZ4 Putative uncharacterized protein n=3 Tax=Vibrio RepID=A7JZZ4_VIBSE Length = 310 Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 62/98 (63%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + +L++I NL+ +S+++I++ S +SR +Q +F+ V + YIR+ +L AA + Sbjct: 14 IHSVLDYIHNNLDIALSVDEISKASCWSRWQLQRVFQQHTGVSVAHYIRELKLSLAAERL 73 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 T+ LDIA+ + F S+ +FSR FK +F SPR+YR Sbjct: 74 IHTSDRSLDIAIEMGFASEHAFSRAFKNMFSKSPRDYR 111 >UniRef50_B8H068 Transcriptional regulator, AraC family n=13 Tax=cellular organisms RepID=B8H068_CAUCN Length = 296 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 86/156 (55%), Gaps = 10/156 (6%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 MR ++++ N R ++++L+ I+ +L+ +S+E +A + +SR + Q F + Sbjct: 1 MRMNQDVANNYHAR---MRRVLDHIDAHLDEDLSVEVLAAVAAFSRHHFQRQFSGLYGIG 57 Query: 61 LGEYIRKRRLCRAAI-LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 + Y++ R+ RA+ L +L IAL ++ ++FSR F++LF SP +R Sbjct: 58 VAAYVQLARMKRASYRLAFRDQDGVLGIALDSGYEGPEAFSRAFRRLFDQSPSSFRRAPR 117 Query: 120 WDLANIFPSFLIRQQQKT------ECRLINFPETPI 149 W+ + S L++ +++T + R+++FP+TP+ Sbjct: 118 WEPWHAAQSPLVQARRQTMTFTDDDVRIVDFPDTPV 153 >UniRef50_B9Z4B5 Transcriptional regulator, AraC family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4B5_9NEIS Length = 323 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 60/102 (58%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 RQ L + + +E N+E P++ ++IAQ +G SRR ++ +F+ + VP Y + RL RA Sbjct: 211 RQPKLTEAVMLMEANIEEPLTTDEIAQFTGQSRRQLERMFKQHLDVPPSRYYLQLRLERA 270 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 ++R T KS++ I L F S FS ++ FG +PRE R Sbjct: 271 RAMLRNTGKSVVQIGLLCGFSSGPHFSTVYRSHFGIAPREER 312 >UniRef50_C0Z5D7 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z5D7_BREBN Length = 285 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 56/94 (59%) Query: 22 LEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTA 81 L +IE L ++++++A +GYS+ + Q LF + +G+YI KRRL AA + L Sbjct: 11 LSFIEKQLTEKVTLDEVASAAGYSKYHFQRLFFHVTGETVGQYISKRRLTEAAKALSLEQ 70 Query: 82 KSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 KS+ ++A + FDS ++F+R F K FG P R Sbjct: 71 KSVTEVAFTYGFDSHEAFTRAFTKRFGLPPSALR 104 >UniRef50_C1I6N3 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I6N3_9CLOT Length = 288 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 62/98 (63%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +++ L +IE NL+ I + IA+++GYS + +F+ + + +Y+RKRR AA + Sbjct: 10 IKKALNYIENNLQEDIDLSAIAKEAGYSLYHFHRIFKGIVGDSMKDYVRKRRFTEAAKEL 69 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 T KS+++I + ++S++ FSR F+K++G +P E R Sbjct: 70 VYTNKSIVEIGIKYGYESREGFSRAFEKVYGRNPSEVR 107 >UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales RepID=C4ZBG0_EUBR3 Length = 279 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 62/100 (62%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +Q+ +E+I N +PI++EDIA G SR ++ F++ + V EY+ R+ +A L+ Sbjct: 174 VQKGIEYISANYSYPITVEDIASYIGLSRSHLFRSFQSILGVSPKEYLTDFRIKQACYLL 233 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + ++ S+ IA S+ FD+ FS+ F K+ G SP+EYR + Sbjct: 234 KHSSLSITAIAGSIGFDNSLYFSKTFHKIKGLSPKEYRSK 273 >UniRef50_B8I4L9 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I4L9_CLOCE Length = 452 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/100 (37%), Positives = 60/100 (60%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +Q+ +++IE N+E+ I+I+ AQ + S N +F + EYIR RR+ AAI + Sbjct: 7 IQKSIDYIESNVENKINIDFAAQTAFMSLSNFYRMFFALTGYSVKEYIRLRRISLAAIDI 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + T ++DIA+ F+S SFSR FK++ G P +YR + Sbjct: 67 QGTDTCLIDIAIKFDFESGDSFSRAFKRITGFLPSDYRKK 106 >UniRef50_UPI0001789679 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789679 Length = 289 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 73/157 (46%), Gaps = 6/157 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M +I++Q L IE NLE P+S+ +A S+ LF M L +YI RRL Sbjct: 1 MNHHRIIEQALIHIEENLEQPLSVSSVALTFNMSKYYFHRLFSAMMGCSLNQYILSRRLN 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 A L+ S+ DIA L F +Q SF+R FK+ +G +P R P+ + Sbjct: 61 AALSLIHNNNLSLTDIAYQLAFGTQASFTRAFKQHYGVAPSSLRAGFNKISPTPIPTVVK 120 Query: 132 RQQQK------TECRLINFPETPIFGNSFKYDIEVSN 162 R + T+ L F ET I G +F+ D+ + Sbjct: 121 RPFKNMNGDVVTDFTLTEFKETRISGIAFEVDLATDD 157 >UniRef50_Q9K766 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9K766_BACHD Length = 297 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 66/99 (66%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +Q+ L++IE NL+ +++E +A+ + +S + +F+ + + +YIRKRRL AA + Sbjct: 7 IQRTLDYIEENLQEQMTLEQLAKIACFSPFHYHRVFQAIVGESVMDYIRKRRLTCAAERL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 T + ++ IA+ + F Q+SF+R FKK++G SPR+YR+ Sbjct: 67 FYTDEKVITIAIEVGFQYQESFNRAFKKIYGVSPRQYRN 105 >UniRef50_A7FVD8 Transcriptional regulator, AraC family n=4 Tax=Clostridium RepID=A7FVD8_CLOB1 Length = 294 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 6/143 (4%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 +L LE+IE NL I+I+DI++ + SR + Q +F + + +YI+ RRL AA Sbjct: 6 LLNNTLEYIERNLHTAINIDDISKVACSSRYHFQRVFHSLTGFTVTQYIKNRRLTLAAEE 65 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQK 136 + T + ++DIAL ++S ++F++ FK+L G SP + + FP + K Sbjct: 66 LVSTDRRIIDIALKYGYESPEAFTKAFKRLHGISPSALKKLN--GKIKAFPKISFQISIK 123 Query: 137 TEC----RLINFPETPIFGNSFK 155 EC R++ +FG F+ Sbjct: 124 GECEIIYRIVEKEAFKVFGTGFE 146 >UniRef50_C9AWD9 AraC-family transcriptional regulator n=5 Tax=Firmicutes RepID=C9AWD9_ENTCA Length = 300 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 59/100 (59%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +Q+ +++IE NL P+ IE +AQ + S Q LF + + + EYI+ RRL R A+L+ Sbjct: 7 IQKSIDYIEDNLTEPLEIETLAQVASLSVFYYQRLFTRLVKISVREYIKLRRLARGALLL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + K ++D+A + F S FSR FK ++ SP Y+ + Sbjct: 67 KNQKKRVIDVAFEVGFSSHAVFSRTFKTVYRISPSLYQKK 106 >UniRef50_C5RM20 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RM20_CLOCL Length = 273 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 69/115 (60%), Gaps = 2/115 (1%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 +L + + +IE NL + I EDIA++ +S ++Q LFR + + EYI KRRL AA Sbjct: 6 VLIEAINYIEENLCNYILQEDIARECYFSLSSLQKLFRYAFNHSIKEYITKRRLTNAAKD 65 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 + + ++ +IA+ ++S + F+R F KL+G SP +++++ W IFP ++ Sbjct: 66 IVNSQMTITEIAMKYQYNSPEVFTRAFSKLWGISPSKFKNQ--WKFTGIFPKLIL 118 >UniRef50_B0KTA0 Transcriptional regulator, AraC family n=2 Tax=Pseudomonas putida RepID=B0KTA0_PSEPG Length = 351 Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 60/96 (62%) Query: 22 LEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTA 81 LE + N+E PI I++IA+ +G SRR+++ LFR + Y + RL A L++ T+ Sbjct: 243 LELMHANIEDPIGIDEIAEHAGLSRRHLERLFRRHVQATPPRYYLELRLTHARQLLQHTS 302 Query: 82 KSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 KS+ ++A++ F S F R F++LF +PR+YR R Sbjct: 303 KSLTEVAVASGFISFPHFYRRFRELFAVAPRQYRAR 338 >UniRef50_C0D9U5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9U5_9CLOT Length = 142 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 60/104 (57%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 I++Q++ +IE NLE + +E IA +GYSR ++ +F + +Y++ RRL AA Sbjct: 7 IVRQVITYIESNLEGDLDLEKIAASAGYSRFHLNRIFAGETGCTIYKYLQARRLTSAAEK 66 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 + T + IA + SQQ+FS FK+ + CSP+ YR R + Sbjct: 67 LAKTHTPIAQIACESGYSSQQAFSLAFKRAYLCSPKVYRDRGIF 110 >UniRef50_B8FUU7 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FUU7_DESHD Length = 129 Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 58/94 (61%) Query: 22 LEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTA 81 L++IE NL+ I +ED+AQK+ S+ LF + YI +RR+ +AA + T Sbjct: 11 LDYIEENLDDRIDLEDLAQKAYLSKYYYHRLFHKVTGESVTRYITRRRMAKAAEELVETE 70 Query: 82 KSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + ++DIAL + SQ+SF+R F +++G +P +YR Sbjct: 71 QPIIDIALKYQYASQESFTRAFMRIYGLAPGKYR 104 >UniRef50_B7GST4 Transcription activator, effector binding n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GST4_BIFLI Length = 286 Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 63/104 (60%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M R L++ + +IE +L I + ++++++GYS + LF + + +G YI +RRL Sbjct: 1 MKRYPPLERAITYIEAHLNEYIGLNEVSRETGYSYYYMTRLFSSVLGESVGHYINRRRLY 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 A+ + + + ++DIAL ++S ++FSR FK +FG SP YR Sbjct: 61 NASEKLIHSDQKVIDIALDCGYESSEAFSRAFKAVFGYSPVAYR 104 >UniRef50_B8I706 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I706_CLOCE Length = 284 Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 56/98 (57%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + + +++IE NL IS AQ + S + Q +F + VPL EYIR+RRL AA + Sbjct: 7 MNKAIDYIESNLADKISYNKAAQIACCSTYHFQRMFSSITDVPLSEYIRRRRLTLAAFEL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + + ++D+A ++S ++FSR FKKL G P R Sbjct: 67 QTSDIKVIDVAFKYGYESPEAFSRAFKKLHGVMPTSAR 104 >UniRef50_B9JE85 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JE85_AGRRK Length = 296 Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 61/99 (61%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 +L++L+E IE +LE P+SI D+A+++ S ++ FR +P Y+ +RRL RAA L Sbjct: 193 VLRRLMEMIEASLERPVSIADLAREADLSDHHMSRAFRLSTGLPPHAYMIRRRLERAAEL 252 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +R ++ S+ ++A + + FS F+ G +PR+YR Sbjct: 253 LRFSSASITEVAYMCGYSNPSHFSTAFRGEMGIAPRQYR 291 >UniRef50_C1D8X9 Putative uncharacterized protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D8X9_LARHH Length = 338 Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 38/101 (37%), Positives = 59/101 (58%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q L + + +E N+E P+S +DIA G SRR ++ LF+ +++ Y + RL RA Sbjct: 226 QPKLTEAVSLMEANIEEPLSTDDIAFYVGVSRRQLERLFKQYLNTVPSRYYLELRLNRAR 285 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L++ T+KS++ I LS F S FS ++ FG +PRE R Sbjct: 286 QLLQQTSKSIVQIGLSCGFSSGPHFSSTYRNHFGITPREER 326 >UniRef50_C9NSN9 Transcriptional regulator AraC family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NSN9_9VIBR Length = 284 Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 14/158 (8%) Query: 22 LEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTA 81 +E+IE +L IS+ IA S YS + +F+ + EY+RKRRL AA + Sbjct: 8 IEYIEQHLYDKISVHQIAAASHYSTYHYSRVFKALVGDTPKEYLRKRRLTMAAKRLLTEE 67 Query: 82 KSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD------YWDLANIFPSFLIRQQQ 135 +LD+A+ FDSQ++F+R FK LF +P +YR + Y + N ++ + Sbjct: 68 VGILDLAMDCQFDSQEAFTRAFKALFNMTPAQYRKMNEPFRLLYKNQINEDDLSFLQNRI 127 Query: 136 KTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRR 173 E +I P + G ++N+ DE++ L R Sbjct: 128 SMEPEIITQPAIKLVG--------IANQYTDEDLSLPR 157 >UniRef50_A8MJ72 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJ72_ALKOO Length = 302 Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 63/100 (63%), Gaps = 1/100 (1%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 ++Q L++I+ ++ I++E++A+ +G+S + +F +F+ +P+ EYI +R+L + A+ Sbjct: 5 NLIQNTLDYIDFHILEKITVEELAKIAGFSTYHFYKVFNSFVGMPVMEYITRRKL-QYAL 63 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 K +LDIAL+ F++ F++ FKK FG P YR Sbjct: 64 YDLSNGKKVLDIALTYGFETHAGFTKAFKKSFGYPPSFYR 103 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 3/106 (2%) Query: 13 IRQKILQQL---LEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 I QK L+++ L +I N + I+IEDIA YS+ F+ M V +Y+ R Sbjct: 188 INQKSLKKIKTILSYIANNFQENIAIEDIANYCFYSKSYFMKFFKETMGVSFIQYLNDYR 247 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L AA L+ T ++LDIA + F++ F+R FKK +G SPR+YR Sbjct: 248 LEIAAELLTTTTDNILDIAFATGFNNISYFNRCFKKKYGVSPRKYR 293 >UniRef50_UPI0001789CA8 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789CA8 Length = 125 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 5/106 (4%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 NEM+ Q +++W+E NL S+ ++++ GYS F + L +Y+ RR Sbjct: 5 NEMV-----QHMVDWVEANLTESSSLLKMSEQFGYSPYYCSRQFNQLTGMTLRDYVWTRR 59 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + RAA+ +R T + +LDIA+ F SQ++F+R F K F SP Y+ Sbjct: 60 ISRAALELRDTDQRVLDIAVKYGFSSQEAFTRAFTKAFQLSPAAYQ 105 >UniRef50_A6LY67 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LY67_CLOB8 Length = 291 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 61/94 (64%) Query: 22 LEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTA 81 +E++E +L +S+E +A++ +S+ + LF+ + +G+Y KRRL AA+ + T Sbjct: 11 IEYLEKHLLEGVSLEQLAKQFNFSKFHYARLFKAVLGENIGDYQMKRRLTIAAMSLLETR 70 Query: 82 KSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 S+L+IA+ + SQ+SF+R FK FG +P++YR Sbjct: 71 DSILNIAIMCGYSSQESFTRMFKAYFGITPKDYR 104 >UniRef50_C6CRD1 Transcriptional regulator, AraC family n=2 Tax=Firmicutes RepID=C6CRD1_PAESJ Length = 303 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 55/94 (58%) Query: 22 LEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTA 81 +E+IE NLEH I E IA+ + S Q +F + +PL EYIR+RRL AA ++ Sbjct: 11 VEYIEDNLEHDIDYEQIARIALCSVYQFQRMFSFVLEIPLSEYIRRRRLTLAAFDLQDRK 70 Query: 82 KSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + DIAL +++ +SFSR F+ L G +P R Sbjct: 71 NKVTDIALKYGYETPESFSRAFQNLHGLTPTAAR 104 >UniRef50_UPI0001C368D7 AraC-family transcriptional regulator n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368D7 Length = 320 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 57/98 (58%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + +L+++E +L ++ E +AQ +G S Q LF+ P+ EY++ RRL AA + Sbjct: 7 IDGVLDFMEEHLREEMNTEALAQSAGLSPFYFQRLFKRLTGRPVLEYVKMRRLALAASAL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 K +LDIA+ F S SF+R FK+ +G SP +YR Sbjct: 67 EDREKRILDIAVDYGFSSHASFTRAFKEAYGISPEKYR 104 >UniRef50_D1UAH3 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UAH3_9DELT Length = 285 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 12/130 (9%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 MR KE T+ + + + ++LE I+ +L+ P+ + D+A + +S + +F + Sbjct: 1 MRTTKEETKKDHAER--MDRVLEHIQAHLDDPMQLLDLADIACFSPYHFHRIFSGMIGES 58 Query: 61 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR----- 115 + +IR+ RL RAAI ++L + DIA F++ +SF+R F +FG SP+ +R Sbjct: 59 VKSHIRRLRLERAAITLKLGEAPVTDIAFQAGFETHESFTRAFNAMFGLSPQRFRQAHHG 118 Query: 116 -----HRDYW 120 H +YW Sbjct: 119 TLDHKHCNYW 128 >UniRef50_C4ZHQ7 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C4ZHQ7_EUBR3 Length = 246 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 66/113 (58%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 L + I K + Q +++I N++ I+I D+A +G S + +F+ + V + +YIR Sbjct: 130 LQKKSSILSKPVTQCVDYIYSNIKERITIADLAAYTGLSESYLSRVFKQNLGVSISDYIR 189 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 ++++ +A L++ + K ++DIA L F SQ F + F+ G +P++YR R Y Sbjct: 190 EKKIEKATHLLKYSDKPIIDIANYLSFSSQSHFIQIFEGFTGLTPKKYRDRYY 242 >UniRef50_C6CRY2 Transcriptional regulator, AraC family n=69 Tax=Bacillales RepID=C6CRY2_PAESJ Length = 301 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 61/101 (60%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +QQ +++IE ++ +S+ +AQ + S + +F++ + EY+RKRRL +A V Sbjct: 9 IQQTIDYIEAHISEELSLSRLAQVAKLSDFHFHRVFQSMAGETVMEYVRKRRLAISAYQV 68 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 + ++DIAL F + ++F+R FK++F +P EYR R+ Sbjct: 69 ANSDAKLIDIALDTGFQNHETFTRAFKRMFEMTPAEYRKRE 109 >UniRef50_C1DQ04 Transcriptional regulator, AraC family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DQ04_AZOVD Length = 325 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 3/130 (2%) Query: 25 IECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTAKSM 84 IE E P +E IA + S Q F+ M GEY+R+ RL RAAI + ++ +S+ Sbjct: 61 IESTTEEPFPLERIAAHANLSASRFQRRFQEAMGESPGEYLRRTRLDRAAIFLIISQESV 120 Query: 85 LDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKTECRLINF 144 L IALS + S ++F R F + FG P +YR + P + + + R+ +F Sbjct: 121 LSIALSTGYASHEAFIRAFHRQFGLVPTQYRQFARRASTPLAPE---DEPRVAQVRVESF 177 Query: 145 PETPIFGNSF 154 P P+ F Sbjct: 178 PSQPVLAMRF 187 >UniRef50_C4X996 Regulatory protein n=4 Tax=Klebsiella RepID=C4X996_KLEPN Length = 176 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 2/115 (1%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 M E+ +MI ++Q +++WIE ++ +S+ IA+KSGYS Q F Sbjct: 16 MAKTDEVVSAKMI--PVVQGIVDWIEAHIFDTLSVSAIAKKSGYSHWYFQRQFAMVTGCT 73 Query: 61 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L Y+ +R++ A I + T S+ I+ L ++ Q +F R F + FG SP YR Sbjct: 74 LASYVSRRKMTIATIYLTQTQASIQSISQCLGYEGQAAFCRTFHRHFGMSPTRYR 128 >UniRef50_D0YX27 Hypothetical transcription regulator n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YX27_LISDA Length = 234 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 62/114 (54%) Query: 4 DKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGE 63 + E+T++ R++ L+ L+ I+ NL P+ ED+A YS LF + M V L + Sbjct: 116 EDEITQDISEREEPLRPALKIIDENLSSPLREEDLAAACHYSPTYFSRLFHSVMGVTLKQ 175 Query: 64 YIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 YI K+RL A L+ + + IAL+ F FSR FKK GCSP E+R R Sbjct: 176 YIIKKRLDMACGLLSADKEKIAVIALTTGFKDVSYFSRVFKKHLGCSPGEFRTR 229 >UniRef50_UPI0001787EAC transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787EAC Length = 447 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 60/104 (57%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M +I+Q+ ++++E +L P+++E+IA + S N+ LF + P+ EYIRKRR+ Sbjct: 1 MQTGEIVQRAIDFVEDHLTEPLALEEIAGVAAMSLPNLYRLFHSITGHPVKEYIRKRRIS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 AA +R T +DI F+S +F + FK+ G +P YR Sbjct: 61 EAASCLRNTDLPTIDIGYRCGFESYPAFMKTFKRCTGLTPGAYR 104 >UniRef50_A9KRP2 Transcriptional regulator, AraC family n=7 Tax=Bacteria RepID=A9KRP2_CLOPH Length = 292 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 56/101 (55%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 K +++++IE NL+ IS + I+Q +G S N Q +F PL EYIR RRL AA Sbjct: 5 KKFNEVIKYIEDNLKGEISYDTISQIAGCSIYNFQRMFSYIADKPLSEYIRNRRLTLAAF 64 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 + + ++DI+ ++SQ +FSR F+ G P R+ Sbjct: 65 DIMNSKDRIIDISFKYGYESQDAFSRAFRSFHGVLPSAARN 105 >UniRef50_C6LAW9 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAW9_9FIRM Length = 303 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 60/98 (61%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L++ ++I+ +L +SI IA +G ++ +Q LF MH +G YI ++RL +A L+ Sbjct: 176 LKKACDYIDRHLLEELSIPAIAACAGVNKSYLQALFSRTMHCTIGSYINQKRLNQAVFLL 235 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 ++ S+ D+A + ++S+Q F+ F+K +G SP YR Sbjct: 236 TNSSLSVTDVAFASGYNSRQHFAHTFQKFYGISPSHYR 273 >UniRef50_A6TGX0 Regulation of superoxide response regulon n=6 Tax=Klebsiella RepID=A6TGX0_KLEP7 Length = 122 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 69/114 (60%), Gaps = 5/114 (4%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 + ++ ++Q +L LL WI+ NL+ ++++D++ SGYS ++ LFR++ EYIR Sbjct: 6 IMRSKTLQQSVLSDLLLWIDNNLDKKLTVDDLSDISGYSPWHLFRLFRHYFDRSPMEYIR 65 Query: 67 KRRL---CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 ++R+ CR +L+ ++DI + + +D +F+R FKK +P +YR++ Sbjct: 66 QQRMSLCCR--LLLTTPGYRIVDICMMVGYDDLSAFNRTFKKYHALTPTQYRYQ 117 >UniRef50_Q17ZV7 AraC-family transcriptional regulator n=7 Tax=Bacteria RepID=Q17ZV7_CLOD6 Length = 289 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 83/143 (58%), Gaps = 5/143 (3%) Query: 18 LQQLLEWIECNL-EHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 +++ L++IE +L + + + I+++ GYS+ ++ +F + + + YI++RRL AA + Sbjct: 8 IEKTLDYIEKHLLDEMLDLNVISKEIGYSKYHLHRMFTSVVGFSVHNYIQRRRLTEAARM 67 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY-RHRDYWDLA---NIFPSFLIR 132 + T K +++IAL +D+Q+SFSR FKK+F SP + RH+D+ L +I +R Sbjct: 68 LIFTEKPIIEIALISGYDTQRSFSRGFKKMFKRSPNFFRRHQDFLPLQLKFDIHNRKKLR 127 Query: 133 QQQKTECRLINFPETPIFGNSFK 155 + + +N + I G S K Sbjct: 128 GDMVLDVKKVNCADINIVGYSGK 150 >UniRef50_C6IVK7 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVK7_9BACL Length = 304 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 63/103 (61%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q+ + Q+ ++I+ +L H ++++ +A+ S +S+ + +F + YI K+RL RAA Sbjct: 5 QERVDQVCKYIDAHLHHKLNLDQLAELSHFSKYHFSRIFASVTGETPFAYITKQRLARAA 64 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 +R T +S+L+IAL F+S SF+ FKK FG +P E R + Sbjct: 65 AYLRETNQSVLEIALGCGFESASSFNAAFKKHFGRTPTEMREQ 107 >UniRef50_C8ZY41 AraC family transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C8ZY41_ENTGA Length = 292 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 99/181 (54%), Gaps = 16/181 (8%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 K +Q L +IE NL +S ++IA+K+G S + Q +F+ + + + +Y++KRR+ A++ Sbjct: 7 KDIQLALLYIENNLTGDLSSKEIAKKAGMSEFHFQRVFKKQLGMGVYKYLQKRRMAHASL 66 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQ 135 L+ + +++IAL F SQ++FSR FK + PR+YR + F +F Q+ Sbjct: 67 LLLKSELKIIEIALISGFSSQEAFSRVFKSYYQLPPRQYRIQ--------FKNFFRGNQK 118 Query: 136 KTECRLINFPETPIFGNSF-KYDIEVSN---KSPDEEVKLRRHHLARCMKNFKTDIYFVS 191 E ++ + + GN+F KY++ + S ++ VK+ + + +NF T + VS Sbjct: 119 MCETKINGW---LLSGNNFDKYEVTIDQMNFHSGNQSVKMSQTE-SLYTENFATVMQQVS 174 Query: 192 T 192 Sbjct: 175 A 175 >UniRef50_UPI000179450C hypothetical protein CLOSPO_01339 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=UPI000179450C Length = 337 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 63/100 (63%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 ++Q+ + I + +H +I+++A++ S+ ++ F+ + Y++K R+ +AA+++ Sbjct: 222 IKQIKKLITEDFKHRYTIQELAKEYCISQTTLKTYFKGIYGTSMAAYMKKYRMKQAAVML 281 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 R T+ S+ DIA+S+ + SQ F+ FK++ G SP EYR + Sbjct: 282 RETSNSVADIAISVAYQSQSKFAASFKEIIGISPFEYRKK 321 >UniRef50_C5EUD7 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUD7_9FIRM Length = 286 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 2/111 (1%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 ++++++ +I N+ P+ ++DIAQ S + ++N + +YI++RR+ A Sbjct: 176 HEVIKKVENYINQNISGPLPLKDIAQHVFMSSAYLSTTYKNVTGRNITDYIQERRVSAAC 235 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANI 125 L+R T+ S+ DIA F F++ FKK G +PREYR R W +I Sbjct: 236 FLIRTTSGSISDIAQETGFSDANYFTKVFKKKTGMTPREYRQR--WKNGDI 284 >UniRef50_B1HZR5 Transcriptional regulator (AraC/XylS family) n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HZR5_LYSSC Length = 294 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 58/97 (59%) Query: 19 QQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVR 78 Q+++ +IE L I +E + +GYS+ ++ +F+ + +GEYIR RRL AA + Sbjct: 8 QRIITYIEEQLMEEIELEFMPSITGYSKFHLSRIFKQETGLTIGEYIRMRRLAVAASCLI 67 Query: 79 LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + S++ IA F SQ++F+R FK+++ P +YR Sbjct: 68 YSNASIITIAFKFQFQSQEAFTRAFKEVYALPPGKYR 104 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 56/98 (57%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + + + I+ + + PIS++D+ + SG SRRN F M +Y+ + R+ A+ L+ Sbjct: 189 IAEAISHIQRHFDRPISLDDLVEISGMSRRNFIRTFEGTMETSPIKYLIQVRIQEASRLL 248 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 R T +S+ DIA + F FSR+F+ G SPREYR Sbjct: 249 RSTDRSITDIAFDVGFSDSNYFSRQFRTHLGLSPREYR 286 >UniRef50_B9Z8M5 Transcriptional regulator, AraC family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8M5_9NEIS Length = 327 Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 58/101 (57%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q L + + +E N+E P++ +DIA G SRR ++ LF+ + +Y + RL RA Sbjct: 216 QPKLTEAVSLMEANIEEPLTTDDIAYYVGISRRQLERLFKQHLSAVPSKYYLELRLKRAR 275 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L++ T+KS++ I L+ F S FS ++ FG +PRE R Sbjct: 276 QLLQQTSKSIVQIGLACGFSSGPHFSSSYRNHFGITPREER 316 >UniRef50_A5FBU0 Transcriptional regulator, AraC family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FBU0_FLAJ1 Length = 357 Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 60/98 (61%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +++L E I+ N E P +I+ +++KSG S +Q F+ + + +YI R+ +A IL+ Sbjct: 250 IKELSEVIKANPEEPFTIKSLSKKSGLSPNKLQEGFKMIHNRTVNDYITHMRVLKAEILI 309 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 R + ++ +I + F S+ FS+ FK+ F CSP+EY+ Sbjct: 310 RTSDLNISEIVYCIGFTSRSYFSKIFKQKFNCSPKEYK 347 >UniRef50_Q12PA0 Transcriptional regulator, AraC family n=1 Tax=Shewanella denitrificans OS217 RepID=Q12PA0_SHEDO Length = 209 Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 62/100 (62%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 + KI+ Q+ ++I + + IS++ +A SG+S+ + +F LGE+I++ +L +A Sbjct: 9 KAKIISQVGQYIYDHSDQTISLDALASYSGFSKYHFNRIFFAATGYQLGEFIQRHKLDKA 68 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPRE 113 L++ +++D+A+S+ +DS SFSR FKK F +P E Sbjct: 69 LQLIKQGNHNIIDVAISVGYDSPSSFSRAFKKNFSVTPSE 108 >UniRef50_D2LQS1 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQS1_BACS4 Length = 301 Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 59/98 (60%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +Q +++E ++E ++I I + YS+ + +F+ + + + EY+++R+L RAA + Sbjct: 7 IQDFSDYVEAHIEEDMNINAIINQLYYSKFHFYRVFKAVVGLSVHEYVKRRKLARAADCL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 T S+L IAL F SQ+ F R FKK++G P ++R Sbjct: 67 LHTKDSILTIALQFGFQSQEVFIRNFKKIYGVPPGKFR 104 >UniRef50_B5JGT3 Bacterial transcription activator, effector binding domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JGT3_9BACT Length = 318 Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 60/105 (57%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 EM + + +Q L+ IE + P+SIE +A + S + Q F + P+G YIR+RR+ Sbjct: 21 EMRQIQAIQTQLDRIESLITAPLSIEKLALDASMSYWHFQRTFTAMVGEPVGRYIRRRRI 80 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 AA+ + ++LD+AL F+S ++F+R FK +P ++R Sbjct: 81 AHAAMRLLDYESTLLDLALDYQFESHEAFTRAFKNELSVTPSDWR 125 >UniRef50_A1ZL96 Transcriptional regulator, AraC-type n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZL96_9SPHI Length = 290 Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 8/134 (5%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q +Q++LE+I +L P+ + +A+ +S + + R +++ PLG YI++ R+ AA Sbjct: 12 QTRIQKVLEYIRQHLSEPLDVARLAEIGNFSVFHFHRIIRAYLNEPLGAYIKRVRMETAA 71 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQ 134 L+ + + D++ + ++ SFS F+K FG SP+ +R + F+ Q Sbjct: 72 QLLTYSHTPIHDLSYQMGYELPSSFSHAFRKYFGKSPQAFREQQ--------QQFIKNQP 123 Query: 135 QKTECRLINFPETP 148 Q T L F TP Sbjct: 124 QTTNTTLPGFVLTP 137 >UniRef50_A8TTK0 Transcriptional regulator, AraC family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTK0_9PROT Length = 330 Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 61/98 (62%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L ++L I+ NL+ +S++++A + +SR + +FR +GE++R+ +L RAA + Sbjct: 42 LLRVLVHIQRNLDRAMSLDELADVAAFSRFHFARIFRAMTGETVGEHVRRLKLERAAGKL 101 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 R T +++ +IAL FD+ ++FSR FK FG P +R Sbjct: 102 RHTRQTVTEIALDAGFDTPEAFSRTFKAQFGDPPSRFR 139 >UniRef50_A1UID3 Transcriptional regulator, AraC family n=5 Tax=Mycobacterium RepID=A1UID3_MYCSK Length = 150 Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 2/101 (1%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLF-RNFMHVPLGEYIRKRRLCRAA 74 + LQ+ + ++ PI+++D+A +G SR + +F R F P EY++ RRL RAA Sbjct: 8 RYLQRARDLVDARYAEPITVDDLAAAAGLSRAHFSRMFTRTFGESPR-EYLQTRRLERAA 66 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L+R T +S+ DI + S SF+ F +++G P YR Sbjct: 67 ALLRYTDRSVADICAMVGLQSVGSFTTSFARVYGLPPAAYR 107 >UniRef50_B1BZ28 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=B1BZ28_9FIRM Length = 432 Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 61/106 (57%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 + +LQ++L+++ + P++IE+I K SR ++Q LFRN + + Y+ + +L ++ Sbjct: 326 QDGLLQEILDYMNSMITEPLTIEEICHKFSISRSSLQTLFRNNLEISPKNYMVQIKLKKS 385 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 L+R ++ +IA L F S FSR FK+ F +P EY + Y Sbjct: 386 KELIRENKYTISEIAFMLGFSSIHYFSRTFKQHFNLTPSEYAKKLY 431 >UniRef50_A3Y825 Transcriptional regulator, AraC family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y825_9GAMM Length = 289 Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 58/103 (56%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L+ L +IE NL+ +SIE I+ + G S+ ++ F+ + + L E I RL RAA + Sbjct: 5 LKAALNYIESNLDKSLSIESISTQVGMSQSHLHRKFKAELGLSLYELIILLRLKRAAYQL 64 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 ++DIA H+ S Q+F+R F+K+F +P +R R W Sbjct: 65 AYRQTKVIDIAFEAHYKSHQAFTRAFQKVFKQAPSAFRKRANW 107 >UniRef50_Q64RP2 AraC-type transcriptional regulator n=6 Tax=Bacteroidales RepID=Q64RP2_BACFR Length = 280 Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 62/106 (58%), Gaps = 3/106 (2%) Query: 15 QKILQQL---LEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 +K LQQ+ +++I +L P+ +E +A++ S + + R ++H PL YI ++R+ Sbjct: 7 EKYLQQVNRVIDYINSHLNEPLRVETLAREVCLSEYHFHRIMRAYLHEPLATYIARQRVE 66 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 RA + +++ + +A + +++ QS S+ FK+ FG SP YR R Sbjct: 67 RAVMYLQMKNIRLAQVAEMVGYETPQSLSKAFKQFFGISPTAYRKR 112 >UniRef50_A5W8X4 Transcriptional regulator, AraC family n=13 Tax=Pseudomonas RepID=A5W8X4_PSEP1 Length = 291 Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 57/97 (58%) Query: 19 QQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVR 78 +QL++++E +L+ PI++E++A + S + +FR +P +Y+ RRL RA L+R Sbjct: 190 RQLVDYLEAHLDQPITLEELALRCNLSEYHFARMFRASFGLPPHQYLLARRLHRACQLLR 249 Query: 79 LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L + +IAL F S FS F++ G +P EYR Sbjct: 250 LGVLPLGEIALLCGFASASHFSNRFRQALGATPGEYR 286 >UniRef50_A6LBE5 Transcriptional regulator n=3 Tax=Bacteroidales RepID=A6LBE5_PARD8 Length = 205 Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 61/106 (57%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 + E I Q+ + Q++++I NL P+ ++ IA + S R + + + ++ L Y+ ++ Sbjct: 4 DTENIYQRKINQVIDYINANLHLPLRLDIIAGQVNVSERQLLRIMKGALNESLYAYVARQ 63 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY 114 R+ RA + + S+ D+A + +D+ QSFS+ FKK F SP+ Y Sbjct: 64 RVERAVLYMHTEDMSLADLASRVGYDNPQSFSKAFKKQFSVSPKAY 109 >UniRef50_C7X8J2 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C7X8J2_9PORP Length = 280 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 61/106 (57%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 + E I Q+ + Q++++I NL P+ ++ IA + S R + + + ++ L Y+ ++ Sbjct: 4 DTENIYQRKINQVIDYINANLHLPLRLDIIAGQVNVSERQLLRIMKGALNESLYAYVARQ 63 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY 114 R+ RA + + S+ D+A + +D+ QSFS+ FKK F SP+ Y Sbjct: 64 RVERAVLYMHTEDMSLADLASRVGYDNPQSFSKAFKKQFSVSPKAY 109 >UniRef50_A0Z695 Transcriptional regulator, AraC family protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z695_9GAMM Length = 338 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 5/116 (4%) Query: 2 RYDKELTENEMIRQKI-----LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNF 56 R D E+ M +K+ L+++L+ +E NLE PIS++++A SRR ++ LF + Sbjct: 203 RADVEMQLVPMWSRKVEMQPKLKEVLQLMEANLEEPISLQELADFVQLSRRQLERLFLKY 262 Query: 57 MHVPLGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPR 112 +H Y K RL RA LV+ + +S+++I F S FSR ++K G SPR Sbjct: 263 LHCTPSRYYLKLRLDRARRLVKQSTRSIVEITSMCGFVSTTHFSRCYRKYIGVSPR 318 >UniRef50_C8P1I3 AraC family transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1I3_ERYRH Length = 288 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 2/124 (1%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 LQ +++IE +L+ + +EDIA S YS + LF + + +Y+R+RRL A +L Sbjct: 13 LQNAIDYIETHLDSSLKLEDIAIHSNYSPYHFHNLFSALTGMGVMDYVRRRRLSEAGMLF 72 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKT 137 ++D+A+ ++S +SFS+ FKK +P E + R L FP I QK Sbjct: 73 ISQKVKVIDLAVHYDYESAESFSKAFKKQHHYTPSEIKKRK-GSLQTTFP-IKITHNQKG 130 Query: 138 ECRL 141 ++ Sbjct: 131 AVKM 134 >UniRef50_A6EIJ9 Transcriptional regulator, AraC family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIJ9_9SPHI Length = 309 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 64/101 (63%), Gaps = 1/101 (0%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA- 74 K L ++L+++E +LE +S+E IA + YS + +FR+ ++ L YI ++R+ +AA Sbjct: 13 KRLNKVLQFVEDHLEEELSLEKIAAIACYSPFHFHRIFRSVVNESLNVYIVRKRIEKAAS 72 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 IL+R S+ ++++ F+ SFSR FKK +G SP ++R Sbjct: 73 ILIRKPGISITELSVMYGFNGNTSFSRAFKKYYGMSPSDFR 113 >UniRef50_B7AMQ1 Sensor protein n=1 Tax=Bacteroides eggerthii DSM 20697 RepID=B7AMQ1_9BACE Length = 1296 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 1/102 (0%) Query: 18 LQQLLEWIECNLEH-PISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 L++L++ I NL + ++E++A + G SR + ++ + V E+IR RL +A IL Sbjct: 1194 LERLIKVINENLSNVDFTVENLADEVGISRVQLHRKLKDLIGVSTSEFIRNLRLQQATIL 1253 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 ++ ++ IA ++ F + FS FKK +GC+PREYR R+ Sbjct: 1254 LKDNKVNISQIAYAVGFSNPILFSSTFKKTYGCTPREYRERN 1295 >UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C5EK80_9FIRM Length = 291 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 59/98 (60%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +++ +IE N ++ IS+EDIA +R +FR+ + E++ R+ +AA L+ Sbjct: 179 IREATSFIEQNFQNDISVEDIAAFCNLNRSYFGKIFRDAVGKSPQEFLISYRMTKAAELL 238 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +LT ++ DI ++ + SQ FSR FKK +G SPRE+R Sbjct: 239 KLTELTIKDIGNAVGYPSQLHFSRAFKKTYGISPREWR 276 >UniRef50_B9YCD3 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B9YCD3_9FIRM Length = 310 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 60/101 (59%), Gaps = 1/101 (0%) Query: 18 LQQLLEWIECNLE-HPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 + + +++IE +L+ + + + GYS+ + LF VP+ YI++RR+ AA Sbjct: 26 ISRAVDYIEEHLQDETLDLNAVTAAVGYSKYHWHRLFTALTGVPVHRYIQRRRMSEAARR 85 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + TA +L IAL + +Q+SFSR+F+ ++ CSP+ YR R Sbjct: 86 LVFTADPILRIALDSGYQTQRSFSRQFQAVYHCSPKRYRRR 126 >UniRef50_UPI0001C357C1 AraC family transcription regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C357C1 Length = 307 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 6/111 (5%) Query: 18 LQQLLEWIECNL-EHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 + ++++IE +L E + +E IA YSR ++ +F + PL Y+ +RRL AA L Sbjct: 26 IAAVIDYIEEHLMEEKMDLESIASIFHYSRYHLHRMFASVAGFPLHTYLTRRRLTEAARL 85 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFP 127 + T + +L+IAL+ +++Q+SFSR F+K F SP YR + + FP Sbjct: 86 LVWTDRPVLEIALASGYETQRSFSRAFQKYFQHSPSRYRKK-----GDFFP 131 >UniRef50_Q81BV9 Transcriptional regulator, AraC family n=72 Tax=Firmicutes RepID=Q81BV9_BACCR Length = 296 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 3/109 (2%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 + NE +R+ + ++ ++IE N+ +SIE++A +G+S+ + +F+ ++ L Y+ + Sbjct: 6 SRNEYLRR--IYKVQDYIESNINDSLSIEELADVAGFSKFHFHRIFKGIVNESLSRYVNR 63 Query: 68 RRLCRAA-ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +L RA +L T ++ DIA F FSR FK +G SP +YR Sbjct: 64 LKLERATHLLTYRTDMTITDIAYHFGFTDSAVFSRTFKNYYGVSPSQYR 112 >UniRef50_Q63B02 Transcriptional regulator, AraC family n=72 Tax=Bacillus RepID=Q63B02_BACCZ Length = 367 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 59/98 (60%), Gaps = 1/98 (1%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +QQ+++WIE NL+ S++++++ GYS F + Y+ RRL + + Sbjct: 8 IQQMIDWIEVNLKKEFSLDELSRYMGYSPYYCSFKFHQVTGFSIRRYVLLRRLYLSIEDL 67 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + + ++DIAL ++ SQ+++SR FK +FG +PRE++ Sbjct: 68 K-NGRKIIDIALDYNYSSQEAYSRAFKNVFGMNPREFQ 104 >UniRef50_C1FM43 AraC-family transcriptional regulator n=2 Tax=Clostridium botulinum RepID=C1FM43_CLOBJ Length = 135 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 63/104 (60%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + ++ +++E IE NL ++++ IA K GYS+ ++ +F + + +YI+ RRL Sbjct: 1 MDMKDLILEIIEHIESNLGQEMNLDTIADKFGYSKFHLNRIFFENVGATIYKYIQFRRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 AA + T K +++IA + SQQ+FS F++ +G +P +YR Sbjct: 61 VAAEKLVTTGKPIVEIAYDTGYQSQQAFSIAFRQFYGYTPLQYR 104 >UniRef50_Q6LLD3 Hypothetical bacterial regulatory helix-turn-helix protein n=1 Tax=Photobacterium profundum RepID=Q6LLD3_PHOPR Length = 155 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 69/107 (64%), Gaps = 1/107 (0%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q+ + ++ ++I +L+ +++ED+++ + +S+ + F ++M + + ++I++ RL RA+ Sbjct: 8 QRRINKVCDYIYAHLDDELTVEDLSKVAHFSKYHFHRQFTHYMGIGVFKFIQQLRLKRAS 67 Query: 75 ILVRLTAKS-MLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 + + ++DIAL +F+ +SFSR FKK+F SP E+RH+ W Sbjct: 68 YQLFFHRDTRIIDIALDANFEYPESFSRAFKKVFAQSPSEFRHQSNW 114 >UniRef50_C0YRY4 AraC family transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YRY4_9FLAO Length = 304 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 59/104 (56%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 + + L ++ +I NLE P++IE A++ G S R + F+ + + ++R R+ R+ Sbjct: 196 KDETLLKIARYIHANLEKPLTIESTAKEFGMSTRTLSRKFKEILGMNYVRFLRALRITRS 255 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 L+ +M +IA+ + ++S SFS FKK+ G P EY+H+ Sbjct: 256 LELMLEGKYNMYEIAMMVGYNSLSSFSNIFKKIIGVPPTEYQHK 299 >UniRef50_A5G790 Transcriptional regulator, AraC family n=3 Tax=Bacteria RepID=A5G790_GEOUR Length = 294 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 61/101 (60%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q+ L ++L I+ NL+ P++IE +A+ + S + +F + + Y+R+ RL RAA Sbjct: 18 QERLNRVLIHIQKNLDEPLTIERLAEVACLSPFHFHRIFSAHVGETVTGYVRRLRLERAA 77 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + T +S+ D AL + +++ +F+R F++ FG SP E+R Sbjct: 78 TRIAFTGESVTDTALGVGYETPAAFTRAFRERFGMSPSEFR 118 >UniRef50_B2JCG9 Transcriptional regulator, AraC family n=52 Tax=Burkholderia RepID=B2JCG9_BURP8 Length = 350 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 58/102 (56%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 R L L +E N+E P++ ++IA G SRR ++ LFR ++ +Y RL +A Sbjct: 218 RHPRLNDALLLMEANIEDPLTSDEIAGLVGVSRRQLERLFRQYLGSMPSKYYLGLRLAKA 277 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 ++ T+KS++ I+L+ F S FS +++ FG +PRE R Sbjct: 278 RTQLQRTSKSVVQISLACGFSSAAHFSNAYRERFGVTPREER 319 >UniRef50_A9BU22 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=A9BU22_DELAS Length = 326 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 60/99 (60%), Gaps = 1/99 (1%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + ++L +I+ +L+ P+ +A + +SR + +F +M LG Y ++RRL +AA + Sbjct: 18 INRVLNYIDAHLDQPLDGAHLADIANFSRFHFHRIFAAWMGETLGSYAQRRRLEKAAFRL 77 Query: 78 RLTAK-SMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +K ++L+ AL+ F S ++F+R FK FGC+P +R Sbjct: 78 SCGSKETVLETALATGFQSGEAFARAFKLKFGCTPSAWR 116 >UniRef50_C1FU00 Transcriptional regulator, AraC family n=8 Tax=Firmicutes RepID=C1FU00_CLOBJ Length = 290 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 2/110 (1%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L + +IE N+ I +E++++ + S + Q +F +PL EYIR+RR+ AA+ + Sbjct: 13 LNSAVNYIEKNIRETIDLEEVSKIACCSTYHFQRMFAYIADIPLSEYIRRRRMSLAAVDL 72 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFP 127 + + ++DI+L +DS +F+R FK + G +P R ++ + FP Sbjct: 73 QSGNEKVIDISLKYGYDSPTAFNRAFKSVHGIAPS--RAKEEGTILKAFP 120 >UniRef50_A6LQ44 Helix-turn-helix-domain containing protein, AraC type n=3 Tax=Clostridium RepID=A6LQ44_CLOB8 Length = 223 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 59/103 (57%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 ++ ++L+ + N+E IS++ ++ + S I F+ M + + +Y +K R+ RA +L Sbjct: 120 VINRILKHLHLNIESQISLKKLSGELNLSEGYISDCFKKHMGMTIMKYAKKIRIDRAKVL 179 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 + T S+L+I L+L F Q F + FK G SP EYR+ ++ Sbjct: 180 LVTTTSSILEIGLTLGFHDQSHFHKVFKSFTGVSPSEYRNNNF 222 >UniRef50_Q88KW6 Transcriptional regulator, AraC family n=11 Tax=Proteobacteria RepID=Q88KW6_PSEPK Length = 289 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 73/136 (53%), Gaps = 6/136 (4%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA- 74 K + +L +I+ +LE +S+ +++ + +S + F +M VP+ Y++ RL RAA Sbjct: 12 KRFETVLAYIDSHLEGDLSVNALSRIANFSAFHFHRQFTAYMGVPVSRYVQLMRLRRAAH 71 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQ 134 LV A +L+ A F+S ++F+R FK+ FG +P + W + F + Q+ Sbjct: 72 QLVASPAMPILEAAFGAGFESPEAFARAFKRAFGMAPSVFAKAPNWQAWSAV--FNVPQR 129 Query: 135 QKT---ECRLINFPET 147 ++ + R++NF ET Sbjct: 130 SRSITMQIRIVNFAET 145 >UniRef50_Q48G15 Transcriptional regulator ArgR n=24 Tax=Pseudomonadaceae RepID=Q48G15_PSE14 Length = 351 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 60/100 (60%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L Q + +E N+E P++ ++IAQ SRR ++ +F+ +++ +Y + RL +A ++ Sbjct: 235 LTQAVLLMEANIEEPLTTDEIAQHVCVSRRQLERIFKQYLNRVPSQYYLELRLNKARQML 294 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 T+KS++ I LS F S FS ++ FG +PRE R++ Sbjct: 295 MQTSKSIIQIGLSCGFSSGPHFSSAYRNFFGATPREDRNQ 334 >UniRef50_Q187G0 AraC-family transcriptional regulator n=37 Tax=root RepID=Q187G0_CLOD6 Length = 288 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 52/100 (52%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 K ++++E L+ I + + + SGYS LF + L EY+R RRL AAI Sbjct: 5 KSFNSTIDYLETVLDDEIDEKKVTRISGYSYSMFSRLFSILTEMTLSEYLRSRRLTEAAI 64 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 ++R T + ++D+A ++S SF FK G +P E R Sbjct: 65 ILRDTDEKIIDVAFKFGYESSDSFGTAFKNFHGFTPSEVR 104 >UniRef50_C1ADB7 AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ADB7_GEMAT Length = 283 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 58/98 (59%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L+ + E ++ +L SI +IA+ +G ++ +FR M V +Y+RKRRL ++ L+ Sbjct: 181 LRLVREQLDDSLSGASSIAEIARVAGVHPVHLSRVFRQHMGVNPADYLRKRRLEQSRTLL 240 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 R +A+S+ DIAL+ F Q FS F+ +G +P +R Sbjct: 241 RFSARSLSDIALTCGFSHQSHFSNAFRAAYGVTPSTFR 278 >UniRef50_C9YDH7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDH7_9BURK Length = 319 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 61/99 (61%), Gaps = 1/99 (1%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI-L 76 + +++++I+ +L+ I + +A + +S + LF +M LG+Y+R+RRL AA+ L Sbjct: 18 MNRVMDYIDSHLDGDIDLAALADVAHFSPFHFHRLFAAWMGATLGDYVRRRRLEVAALQL 77 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 T S+L++AL + F S ++F+R FK FG SP +R Sbjct: 78 AGNTRISVLEVALGVGFGSGEAFARAFKLRFGQSPSAWR 116 >UniRef50_B8FN17 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FN17_DESAA Length = 290 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 60/92 (65%) Query: 24 WIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTAKS 83 +I+ +L+ P+++E++A+ + +S + +F PL EYIR+ L RAA +R +++ Sbjct: 18 FIQDHLDDPMTLEELAKVACFSPFHFHRIFTAMTGEPLKEYIRRLLLERAAHELRYSSQP 77 Query: 84 MLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 ++ +AL+ + + ++F+R F+ +FG PR+YR Sbjct: 78 VVQVALNAGYQTHEAFTRAFRNMFGVPPRQYR 109 >UniRef50_B0C4S9 Transcriptional Regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C4S9_ACAM1 Length = 261 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 59/103 (57%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 I K L+ +L++I+ NL+ + + D+A S+ + +F+ M VP Y+ +RR+ + Sbjct: 154 IGSKRLRNVLDYIDANLDQNMGLADLAAVVDLSQHHFSSMFKESMGVPPYRYVLQRRIQQ 213 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 A L++ + S+ DIAL+ F Q ++ F+K G +P+ YR Sbjct: 214 AKQLLKNDSLSITDIALTCGFADQSHMTKHFRKTVGITPKTYR 256 >UniRef50_O31456 Uncharacterized HTH-type transcriptional regulator ybfP n=5 Tax=Bacillaceae RepID=YBFP_BACSU Length = 295 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 61/104 (58%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M +K +Q+ + WIE +L IS EDI S +S+ + +F+ + + + YIR RRL Sbjct: 1 MYYEKAVQKTINWIESHLHEQISNEDIVNVSSFSKFHFHRIFQKEVGMSVASYIRLRRLA 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 AA + T ++DIAL F+SQ++F+R FKK++ P YR Sbjct: 61 NAAAALLYTDHRIIDIALYYQFESQEAFTRTFKKMYHMPPGAYR 104 >UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z3B4_EUBE2 Length = 291 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 3/110 (2%) Query: 6 ELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYI 65 L++++M + K++ L +IE N ISIE+IAQ +S+ + F+N Y+ Sbjct: 184 HLSDDKMDKLKLV---LNYIEKNFARAISIEEIAQWCHFSQSHFMKFFKNCTGTSFITYL 240 Query: 66 RKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 RL AA +++ T + ++ +A FD+ F+R+FK+ +G SPRE+R Sbjct: 241 NDYRLIIAARILKTTTQPVIIVASDCGFDNISYFNRKFKEKYGVSPREFR 290 >UniRef50_D2MMM4 Transcriptional regulator, AraC family n=1 Tax=Bulleidia extructa W1219 RepID=D2MMM4_9FIRM Length = 386 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 61/113 (53%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 N+ +L++++++I +L P+ IE + SR +Q LF+N+M++ YI + Sbjct: 274 NQHYENGLLEEIVQYINSHLYDPLPIESLCDNFAVSRSTLQNLFKNYMNITPKAYINHEK 333 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDL 122 L + +L+R S+ +A L F+S FSR+F + F +P EY + Y L Sbjct: 334 LNLSRLLIRDGKYSVTQVANLLGFNSIHYFSRKFTQKFHINPSEYAKKIYDQL 386 >UniRef50_Q880U5 Transcriptional regulator, AraC family n=2 Tax=Pseudomonas syringae pv. tomato RepID=Q880U5_PSESM Length = 344 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 56/100 (56%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + L+ LE ++ N+E P+S++D+A +G S+R ++ F F+ Y + RL RA Sbjct: 238 QALKVALELMQKNIEEPLSLDDLAACAGISKRQLERRFFRFIGAAPARYYLELRLTRARQ 297 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 LV T +S+ DIA++ F S F R F+ F +P YR Sbjct: 298 LVLQTNRSITDIAMATGFISMPHFHRRFRDFFDAAPGSYR 337 >UniRef50_A8RX40 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RX40_9CLOT Length = 140 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 62/103 (60%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +++++++IE +LE +++E IA+ +GYSR ++ +F + +Y+++RRL AA + Sbjct: 8 VRKVIDYIEEHLEEKLNLEQIAEHAGYSRFHLNRIFMEETGGTIHKYVQERRLTMAAEKL 67 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 T + IA + SQQ+FS FK+++ C P YR R + Sbjct: 68 VDTDMDITQIAYDAGYQSQQAFSLAFKQVYLCPPGAYRKRGIY 110 >UniRef50_B1MI41 Putative transcriptional regulator, AraC family n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MI41_MYCA9 Length = 306 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 52/98 (53%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L +L I NLEHP SI ++AQ + SR F + P YI +RRL RAA L+ Sbjct: 203 LAPVLTAIHNNLEHPWSIAELAQHARQSRSAFTQRFTELLGQPPAAYIGERRLDRAAHLL 262 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 R T + I ++ + S +FSR F++ FG P +R Sbjct: 263 RSTTDPVRQIGRAVGYTSDAAFSRAFQRRFGEPPLRWR 300 >UniRef50_A6VUB3 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=A6VUB3_MARMS Length = 339 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 58/103 (56%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q L + ++ +E N++ P+S +DIA G SRR+++ LF+ + + Y + RL A Sbjct: 216 QPKLVEAVQLMEANIQEPLSSDDIAYHVGVSRRHLERLFKGNLDIVPSRYYLELRLQHAR 275 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 L+ T K++ ++ + F S FS +K FG SPRE R++ Sbjct: 276 QLIIQTDKAITEVGVECGFGSAPHFSTTYKGFFGISPREERNK 318 >UniRef50_A8UPH5 Transcriptional regulator, AraC-type n=3 Tax=Flavobacteriales RepID=A8UPH5_9FLAO Length = 287 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 71/135 (52%), Gaps = 9/135 (6%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q+ L +++++I NL+ I I +A+ S +S + + R + P+G YI + R+ AA Sbjct: 12 QQNLNRVIDFIHNNLDSKIDIALLAELSHFSPYHFHRITRALLGEPIGAYITRARIETAA 71 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQ 134 L+R + S+ IA + F++ S S+ FK FG SP +R++ F+I++Q Sbjct: 72 KLLRYSENSIEQIAYKVGFETPSSLSKAFKNHFGISPSAHRNK---------KEFIIKKQ 122 Query: 135 QKTECRLINFPETPI 149 + + +N + I Sbjct: 123 NIMKTKELNIKKPKI 137 >UniRef50_B4WW69 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WW69_9SYNE Length = 291 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 54/92 (58%) Query: 24 WIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTAKS 83 +I LE I + D+AQ G S+ + F+ M + +Y+ ++R+ RA L++ T +S Sbjct: 198 YIADALEQDIKLADLAQLVGVSQSHFSRQFKKSMGLTPYQYLLQQRIERAKQLLKQTQQS 257 Query: 84 MLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 ++DIAL FDS FSR+F+K G +P YR Sbjct: 258 LVDIALVCGFDSHSHFSRQFRKATGMTPSAYR 289 >UniRef50_Q1QYW4 Transcriptional regulator, AraC family with amidase-like domain n=20 Tax=Gammaproteobacteria RepID=Q1QYW4_CHRSD Length = 375 Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 60/101 (59%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q L +++ +E NLE PI+++++A+ SRR ++ LF+ ++ Y K RL RA Sbjct: 225 QPKLLEIVALMEANLEEPIALDELARYVDVSRRQLERLFQKYLSCSPSRYYLKLRLTRAR 284 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L+R T+ S+++IA F S FS+ +++ FG PR+ R Sbjct: 285 QLLRQTSMSIIEIASVCGFVSTPHFSKCYREYFGTPPRDER 325 >UniRef50_A3YG43 Transcriptional regulator, AraC family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YG43_9GAMM Length = 327 Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 11/127 (8%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA-IL 76 +QQ LE+IE NL +S+ D+A+ S +S + +F+ M L +YI +RR+ RA L Sbjct: 9 IQQALEYIETNLNTHLSLSDVAKASHFSEFHFHRIFKGVMDETLNDYIGRRRMERAVNKL 68 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQK 136 + S+ IAL F S +F++ K FG SP E R PS L Q K Sbjct: 69 MCYPEHSITHIALESGFSSSANFAKAVKLYFGFSPSELRD----------PSKLSNQSDK 118 Query: 137 TECRLIN 143 T+ I Sbjct: 119 TKNSKIG 125 >UniRef50_B7HW35 Transcriptional regulator, AraC family n=34 Tax=Firmicutes RepID=B7HW35_BACC7 Length = 281 Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 56/100 (56%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + LE+IE +L+ I + IA+ + S + +F + V L EYIR+RRL AA + Sbjct: 7 MNNALEYIENSLDEDIDYKKIAKAASCSEFHFSRMFSSISGVSLSEYIRRRRLTLAAFEI 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + ++D+A+ + S +FSR FKK+ G +P R++ Sbjct: 67 QKGDIRIIDVAIKYGYVSSDAFSRAFKKMHGITPSNARNK 106 >UniRef50_UPI00019685E3 hypothetical protein BACCELL_00469 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI00019685E3 Length = 329 Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 60/100 (60%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 K + Q++++I+ NL+ I + +A + S + +F++ M+ +GEY+++ RL RAA Sbjct: 52 KPVNQVVDYIQSNLQEKIELTTLANLANISHFHFHRIFKSVMNENVGEYVQRVRLERAAF 111 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 ++ T ++ +IA + + +Q + S+ FKK F SP YR Sbjct: 112 KLQTTNLNLTEIAEQVGYQTQFALSKAFKKYFNISPSTYR 151 >UniRef50_A9KPU7 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KPU7_CLOPH Length = 294 Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 63/107 (58%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 + +K+++ + IE NL+ +S+++IA++ G S+ + +F+ PL Y+R R+L Sbjct: 3 IANRKLIEDAVILIEDNLKTNLSLDEIAKQIGISKFHFHRIFKAITGSPLITYVRGRKLT 62 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 + + ++DIA +F+ +QS+ R FK+LFG +P +R ++ Sbjct: 63 SSLNELLDDKLKIIDIAYDYNFEYEQSYERAFKQLFGLTPSAFRQKN 109 >UniRef50_A3X5E2 Transcriptional regulator, AraC family protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X5E2_9RHOB Length = 315 Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 60/101 (59%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 +++QL W+E N E ++++ +A ++G + R++ F N + + Y+++ R+ +A L Sbjct: 209 VIRQLQLWMESNTEADLTVKALALQTGLTERSLHRKFSNSTDLSINRYVQELRVEKAKGL 268 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + LT S+ ++ S+ + +F+R FK + G S EYRHR Sbjct: 269 LELTVLSISEVCWSVGYQDVSAFNRLFKSISGISAGEYRHR 309 >UniRef50_A6EEH6 Two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') n=1 Tax=Pedobacter sp. BAL39 RepID=A6EEH6_9SPHI Length = 253 Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 1/109 (0%) Query: 7 LTENEMIRQKILQQLLEWIECNL-EHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYI 65 + E + +K +++L+ IE NL + + +A+K G S+ + F P+GE+I Sbjct: 140 MVEIGTVDKKFMEKLMNIIEANLHDTDFHVAVLAEKIGMSKAVLYKKFYALAQTPIGEFI 199 Query: 66 RKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY 114 + RL +AAIL+ ++ ++A + F ++ FS+EFK+ FG SP EY Sbjct: 200 KTIRLKKAAILLTNDKFNISEVAWEVGFSDRKYFSKEFKRFFGKSPSEY 248 >UniRef50_C6J7H0 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7H0_9BACL Length = 301 Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 58/100 (58%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +Q+ +++IE L +++ ++A+ YS + F F+ + YIRKRRL AA L+ Sbjct: 7 IQKSIDYIEERLGEGLTLAEVAKAMFYSEYHFHRTFLFFVGETMTSYIRKRRLSLAAELL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + ++DIAL F S ++F+R F+K++G P E R R Sbjct: 67 AHSDLKIVDIALRCGFGSHEAFTRAFRKMYGILPTECRRR 106 >UniRef50_A3ZMZ0 Transcriptional regulator, AraC family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMZ0_9PLAN Length = 286 Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 62/101 (61%), Gaps = 3/101 (2%) Query: 16 KILQ-QLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 KIL+ QLL I+ +L+ +S+E +A + YS + +FR + +Y+R+ R+ RAA Sbjct: 11 KILRVQLL--IQHHLDEDLSLEHLAAAADYSPCHFHRIFRGIVGESADDYVRRLRMERAA 68 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +R +S+LDIAL + S ++F+R F + FG +P +Y+ Sbjct: 69 QSLRYRRRSVLDIALDAGYGSHEAFTRAFVRTFGVTPSDYQ 109 >UniRef50_C6LAX2 Regulatory protein SoxS n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAX2_9FIRM Length = 167 Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 54/95 (56%) Query: 21 LLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLT 80 +L +I + IS+ +A + G + + +F N + V +Y+ RL A L+ T Sbjct: 53 ILTYIANHYREDISLSSVAAQFGTGKFVLSRIFSNVLGVSFTDYVNSLRLSHAQHLLAST 112 Query: 81 AKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +++LDIAL + +QQ+F+R FK F C+P+E+R Sbjct: 113 DRNILDIALECGYHNQQTFNRVFKARFSCTPKEFR 147 >UniRef50_B0MIQ9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MIQ9_9FIRM Length = 167 Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 65/103 (63%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 +++I+++++ +IE N++ IS++ IA+ GYS+ + +F + + +Y++ RRL A Sbjct: 29 QKEIVEKVVNYIEDNIKSEISVDIIAKNIGYSKFYLNRIFSERTGITIYKYLQSRRLTIA 88 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 A + T + + +IA +DSQQ+FS FK+L+ P+ YR+ Sbjct: 89 AEKLIKTNEPITEIAYEAGYDSQQAFSLAFKQLYVYPPKIYRN 131 >UniRef50_C6LHX0 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHX0_9FIRM Length = 399 Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 56/93 (60%) Query: 23 EWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTAK 82 E+I +LE +S+ +A+++GY+ + F+ + EYIR++RL +AA L+R T Sbjct: 303 EYISLHLEDRLSLSMLARQTGYTENYLSKKFKRETSLTPNEYIRRQRLEQAAFLLRTTQD 362 Query: 83 SMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + +I+ L F SQ F+ F++ FG +P EYR Sbjct: 363 DVQNISERLQFCSQSYFADHFRRYFGVTPTEYR 395 >UniRef50_A3SJ23 Transcriptional regulator, AraC family protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SJ23_9RHOB Length = 343 Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 54/91 (59%) Query: 25 IECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTAKSM 84 +E +LE P+S+ +I+ ++G S+R ++ LFR ++ Y R RL RA LV T + Sbjct: 232 MERHLEQPLSLPEISDRAGLSQRQLERLFRTYVGRTPALYYRDIRLDRARGLVTQTEMPL 291 Query: 85 LDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +AL+ F +Q FSR +K+ FG PR+ R Sbjct: 292 AQVALASGFSTQVHFSRSYKERFGLPPRQDR 322 >UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=Dickeya dadantii Ech703 RepID=C6C3E5_DICDC Length = 296 Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 60/117 (51%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 +RY E ++ L L+ + ++ P +E Q+ G+S R+++ F+ + Sbjct: 161 LRYRHAPGETQLADAHQLDLLMNALRDSIAQPFRLEAFCQQYGFSLRSLRSRFKQQTGMS 220 Query: 61 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + +Y+R+ RLCRA L+R +++ ++A FD FS F + FG +P YR R Sbjct: 221 VSQYLRQLRLCRAMELLRYDRQTISEVAAQCGFDDSNYFSVVFHQAFGVTPSSYRQR 277 >UniRef50_B8I0Z7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B8I0Z7_CLOCE Length = 287 Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 56/94 (59%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + + +++IE NL + IS +++A + S Q +F +PL EYIR+RR+ +AA + Sbjct: 7 MSRAVDYIENNLTNDISYDEVAGIACCSTYYFQRIFSYIAGIPLSEYIRRRRMTKAAFEL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSP 111 +L+ +++IA+ + + +F+R F + G +P Sbjct: 67 QLSGARVMEIAVKYGYSTAAAFNRAFHSVHGVAP 100 >UniRef50_B1YLZ4 Transcriptional regulator, AraC family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YLZ4_EXIS2 Length = 384 Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 54/98 (55%) Query: 22 LEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTA 81 + +I+ +L P+S+ I+Q S + +LF+ +PL Y+ + R+ A L+R T Sbjct: 287 IRYIQQHLYDPLSVSSISQAIHVSSNYLSVLFKEETGLPLARYVIRERIREAKRLLRSTD 346 Query: 82 KSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 S+L I+ LHF SQ FS+ FK+ G +P YR + Sbjct: 347 DSLLTISNKLHFSSQSHFSQAFKQTTGETPTHYRQHHF 384 >UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH78_9FIRM Length = 307 Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 59/110 (53%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +++++ I+ P+ + DIAQ + R F + + +Y+ + RL + A+L+ Sbjct: 197 IKEMIHMIQSRYAEPLKLCDIAQAANIGERECLRCFHRTLGISPMQYLIRYRLSKGALLL 256 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFP 127 T KS+ +I+ FDS +FS FK+ + CSPREYR + L++ P Sbjct: 257 INTNKSIAEISTRCGFDSPSNFSLTFKRKYQCSPREYRKNNKTLLSSALP 306 >UniRef50_UPI0001A437FB DNA-binding transcriptional activator MarA n=1 Tax=Pectobacterium carotovorum subsp. brasiliensis PBR1692 RepID=UPI0001A437FB Length = 135 Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 61/101 (60%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q I+ +L+ WI ++P++ +A+++G+SR ++Q +F+ + LG+YI+ +L +A Sbjct: 9 QGIIDELIRWIAQQHDNPVTTAMVAERAGFSRWHMQRVFKQRTGITLGKYIKDVKLGKAV 68 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + + + ++ AL ++SQQ+F+R K G +P + + Sbjct: 69 LELIKGNEPVIITALQNGYESQQTFTRAIKNYTGLTPGKIK 109 >UniRef50_C5EMR3 Transcriptional regulator n=4 Tax=Clostridiales RepID=C5EMR3_9FIRM Length = 301 Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 62/110 (56%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 KE + E ++ + +Q++ ++I +L+ IS +A S YS LF ++ + +Y Sbjct: 2 KEQAKGEAVQIEAVQRMQDYIAEHLDEEISPGALAACSLYSPWYSYRLFVRYVGMTPSDY 61 Query: 65 IRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY 114 +R+ RL R+A+ +R ++DIA + F S + R F + FGC+P+EY Sbjct: 62 VRRFRLSRSALRLRDGKVKVVDIAFEMGFKSVDGYQRAFSREFGCNPKEY 111 >UniRef50_Q2CGL8 Transcriptional regulator, AraC family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGL8_9RHOB Length = 253 Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 53/91 (58%) Query: 25 IECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTAKSM 84 IE LE P ++ ++A + S + + F+ V E+I ++RL +AA L+ T +S+ Sbjct: 159 IEAALETPPTVPELAAMANMSESHFRRSFKQVFGVAPQEFILQQRLRQAATLLTRTNRSI 218 Query: 85 LDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +AL+ F Q FSR+F++ FG SPR YR Sbjct: 219 AQVALTCGFGDQSHFSRQFRRFFGESPRSYR 249 >UniRef50_D0Y1I0 Transcriptional regulator, AraC family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y1I0_9CAUL Length = 301 Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 52/97 (53%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 LQ++L++IE N+E + IED+A + S + F+ M VP Y+ RR+ RA L+ Sbjct: 201 LQRVLDFIEDNIEAALGIEDLAAIACLSPFHFARAFKVAMGVPPHRYVAGRRMSRAKSLL 260 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY 114 A + +IA F S SF R FK+ G SP Y Sbjct: 261 AGGAVPVAEIAYRCGFSSVSSFGRAFKRASGVSPAAY 297 >UniRef50_D1N9J7 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9J7_9BACT Length = 296 Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 1/107 (0%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 E++ L ++L I+ + P+SI D G S + LFR ++H Y+ R+ Sbjct: 191 ELLYPPALTKVLGLIDSDYGRPLSIADFTAAGGVSESGLARLFRRYLHTTPYRYLTSHRM 250 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 +A +++ S+ +IA + +D+ +FS EFKK FG SPR + HR Sbjct: 251 RQAEMMLLQGVLSVKEIAARVGYDNPLNFSTEFKKFFGSSPRNF-HR 296 >UniRef50_D2QUQ8 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QUQ8_9SPHI Length = 387 Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 63/96 (65%) Query: 22 LEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTA 81 L++I N++ + ++D+ ++ SRR++++ F+ + P+ +YI+ R+ + + + T Sbjct: 287 LKYIHQNIDKNLQVDDVVKQVPLSRRSLEMRFQQVIGYPIYKYIQNLRIEKFSKKLLETD 346 Query: 82 KSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 +++ +IA+ L + ++ +R+FK++ GC+P +YRHR Sbjct: 347 QAVFEIAMDLGLNDTRNIARQFKQIKGCTPLKYRHR 382 >UniRef50_C3QXL3 Transcriptional regulator n=7 Tax=Bacteroides RepID=C3QXL3_9BACE Length = 381 Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 62/113 (54%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 ++ TE I+ + +++++IE + ++IE + SRRN ++ F+N ++ + +Y Sbjct: 264 RQSTEKHNIKDPYILEVVKYIESHYSSDLTIESLLANIPLSRRNFEVKFKNALNTSIYQY 323 Query: 65 IRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 I R A L+ T + + D+A+ + F + +R FKK GCSP EYR + Sbjct: 324 ILNCRCNHLADLLLTTDRPLADLAMEVGFTDYNNIARIFKKFKGCSPIEYRQK 376 >UniRef50_A8TRB7 Probable transcriptional regulator n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRB7_9PROT Length = 344 Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 57/98 (58%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L ++ +E NLE P+S D+A+++G S R ++ LFR ++ Y RL RA L+ Sbjct: 220 LISVISEMELNLEEPLSQTDLAERAGLSTRQLERLFRKYLGATPTRYYLTLRLQRARQLL 279 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 T+ S+L +AL+ F S FS+ +++ FG +PR R Sbjct: 280 VQTSMSILSVALACGFVSASHFSKCYRECFGRTPRAER 317 >UniRef50_C5ERZ6 Right origin-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ERZ6_9FIRM Length = 164 Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 63/106 (59%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 + M Q +++++ ++IE +LE I ++ IA++ YS+ I +F + + +YI+ RR Sbjct: 17 SHMTNQTVVEKIADYIENHLEEDIPLDKIAKELNYSKFYIARVFADNTGHTIYKYIQGRR 76 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L AA + T K +++IA + SQQ+F+ F + + C+P+ YR Sbjct: 77 LTLAARKLAETDKPIVEIAYEARYGSQQAFTLAFSQFYLCTPQTYR 122 >UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32_CHLAA Length = 1202 Score = 62.8 bits (151), Expect = 9e-09, Method: Composition-based stats. Identities = 34/101 (33%), Positives = 56/101 (55%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q ++++ + +I + HP++ +DIA G S + FR + EY+ + R+ +A Sbjct: 1094 QMLVRKAMAYIHSHYTHPLTRQDIAHYVGMSEDYLTHCFRQELGTTPVEYLNRYRVLQAR 1153 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L+ + KS+ +IAL + F S FSR F+K G SP EYR Sbjct: 1154 HLLAESDKSITNIALEVGFSSSSYFSRVFRKEVGQSPEEYR 1194 >UniRef50_A9IAC9 Transcriptional regulator, AraC family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IAC9_BORPD Length = 268 Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 1/109 (0%) Query: 10 NEMIRQKI-LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 + ++R K +++++ WIE NL I+IE I+ + SR + FR L Y R Sbjct: 153 HTLLRHKAKIKEIMSWIEGNLTEHITIERISDQFAISRSLLTREFRGHTGKSLVGYCNGR 212 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 R+ +AAI + T ++DIAL F + F R+FK FG +P +R + Sbjct: 213 RVQKAAIALATTEAPVIDIALDCGFSNISHFHRQFKSRFGITPAVFRRK 261 >UniRef50_C5RPC5 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C5RPC5_CLOCL Length = 395 Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 1/101 (0%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 QK + Q L++IE NL I A+ S + +F +PL EYIR+RRL AA Sbjct: 4 QKCMNQALDYIENNLACDIDYCAAAKIMNCSEWEFRRIFSFLAQIPLSEYIRRRRLVMAA 63 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 I ++ K ++D+A+ ++SQ +FSR F + G +P R Sbjct: 64 IDIKKGEK-IIDVAIRYGYESQAAFSRAFSRFHGIAPSLAR 103 >UniRef50_A6FZ48 Probable AraC-family transcriptional regulator n=2 Tax=Proteobacteria RepID=A6FZ48_9DELT Length = 300 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 61/104 (58%), Gaps = 1/104 (0%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +++ L +IE +L+ + + +A+ +G S+ + FR + VP+ ++ + RL RAA + Sbjct: 15 VERTLAFIEAHLDEALPVARLAEVAGLSKFHFHRQFRAHVGVPVARFVARLRLRRAAQQL 74 Query: 78 RLTAK-SMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 + + +LD+ALS FDS ++F+R F+ + G SP +R W Sbjct: 75 AFSPELRVLDVALSAGFDSPEAFARAFRAVQGQSPTAFRRAPDW 118 >UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL88_9FIRM Length = 303 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 59/101 (58%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q++ + +I + + +++E+ A+ G+S+ + +F+ +M++ EY+ K+R+ A Sbjct: 187 QEVALKACNYINQHYQEKLTLEETAKMVGFSKYHFTRVFKKYMNMTFYEYLNKKRVKCAE 246 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L+ T S+ D+A++ F S SF R FK L CSP E+R Sbjct: 247 GLLYSTEMSITDVAMNSGFSSMSSFDRTFKALNKCSPSEFR 287 >UniRef50_A3DK60 Transcriptional regulator, AraC family n=2 Tax=Clostridium thermocellum RepID=A3DK60_CLOTH Length = 243 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 1/99 (1%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 ++++ LE+IE NL+ I+ E++ + + YS + LF M + EYI K RL A Sbjct: 5 EVIKTALEYIEQNLKTDITAEELTKMANYSTYHYYRLFSWVMGSSIAEYILKCRLDHALA 64 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY 114 + + K+ +D+ L FD+ F + F K++GCSP++Y Sbjct: 65 EIACSRKA-IDVVLEYGFDTYAGFYKAFVKMYGCSPKKY 102 >UniRef50_Q24TQ4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=Q24TQ4_DESHY Length = 305 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 56/98 (57%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +Q+ L++ E +L I E +A+++ S + Q +F LG+YIR RRL RAA + Sbjct: 21 IQRSLDYTEAHLTEKIDYEMVAKQAYSSAFHFQRVFSILCGFSLGDYIRMRRLARAAEDL 80 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 T + ++ IAL +D+ +SFSR F + G +P E R Sbjct: 81 LCTDEKIIHIALKYGYDTPESFSRAFLRFHGITPTEAR 118 >UniRef50_C7IKI0 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IKI0_9CLOT Length = 140 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 59/101 (58%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + ++ +IE ++ I +++ ++G+S I+ LF+ M+ L YI +R++ AA Sbjct: 7 INVMITFIETRIKRKIDYDELVYETGFSLPYIRELFQCQMNKSLYRYILERKIANAAFEC 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 R T +S+L I +S F++ +F+R FK++ G +P E R D Sbjct: 67 RYTDRSLLSIGMSYGFNNADAFTRAFKRIVGTTPSELRKMD 107 >UniRef50_C1I806 Helix-turn-helix domain-containing protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I806_9CLOT Length = 227 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 58/102 (56%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + +LL+ + N+E+ S+E I S F+ + + +Y+R+ ++ RA L+ Sbjct: 124 VNKLLQALHLNIENHTSLETICNNLNISVGYASTCFKKHKGISIMKYLREIKVERAKTLL 183 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 T KS+L+I++ L F Q F+ FKK+ G SP E+R+++Y Sbjct: 184 LSTEKSILEISILLGFHDQSHFTNTFKKIVGMSPSEFRNKNY 225 >UniRef50_A3W1D7 Transcriptional regulator, AraC family protein n=3 Tax=Rhodobacteraceae RepID=A3W1D7_9RHOB Length = 342 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 58/102 (56%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 R +L + ++ ++ N+E PIS++D+A +G SRR ++ LF ++ + R RL Sbjct: 238 RNPLLVRAIKVMQTNIETPISMDDLADAAGCSRRQMERLFVKYLRKTPYRFFRDLRLDHG 297 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L+R T S+ +IA++ F S F + F+ FG SP +YR Sbjct: 298 RSLLRETDLSVTEIAMASGFASPMVFIKTFRSRFGHSPGQYR 339 >UniRef50_B9Y4X5 Putative uncharacterized protein n=5 Tax=Firmicutes RepID=B9Y4X5_9FIRM Length = 307 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 57/106 (53%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +Q+ L+ IE L I E +A++ S Q LF+ +H + EY++ RRL Sbjct: 1 MYTWEAIQEALDQIEKELPRGIKTEWLAEQVSLSPFYFQKLFKRLVHKSVQEYVKLRRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 R + +++ +IA HF S +F+R FK+ +G +P EYR + Sbjct: 61 RVIEELNQEDRTITEIAYDYHFSSPANFTRVFKETYGITPEEYRKK 106 >UniRef50_Q65T74 AraC protein n=2 Tax=Gammaproteobacteria RepID=Q65T74_MANSM Length = 360 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 4/132 (3%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q ++ +L++I + P++++ +A G + LF++ M + + +YI R+ A Sbjct: 217 QNYVRTMLDYIANHYNAPLTVQSVANAVGLNTNYAMGLFQSAMQLTIKQYIIMMRINHAK 276 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR----DYWDLANIFPSFL 130 L+ T +S+LDI+L+ F S F F K G SP +YR + D W + P+ Sbjct: 277 ALLSDTNRSVLDISLTTGFSSMSRFYDNFLKYTGVSPNKYRKQIRADDNWSAQGLIPTTQ 336 Query: 131 IRQQQKTECRLI 142 + T +LI Sbjct: 337 AIKGASTGEKLI 348 >UniRef50_C3RPB0 AraC-family transcriptional regulator n=3 Tax=Bacteria RepID=C3RPB0_9MOLU Length = 286 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 59/100 (59%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +Q L++IE N + I I+ +A + S+ Q LF + +Y++ RRL +AA + Sbjct: 7 IQVTLDYIEENYDKEIDIDKLAAIAHLSKYYYQRLFFRLTKKTVNDYVKLRRLEKAANQL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + T K +LDIA++ F +F+R FK+++ +P +YR++ Sbjct: 67 KNTEKRILDIAIACGFSGHSAFTRAFKEVYKITPDDYRNQ 106 >UniRef50_C3MCC1 Putative AraC family transcriptional regulator n=1 Tax=Rhizobium sp. NGR234 RepID=C3MCC1_RHISN Length = 343 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 56/102 (54%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 R L + +E LE P+++ +A++ S+R ++LLF + + G Y + RL A Sbjct: 224 RDPELAGAIRLMERTLERPMTVAALARRLAISQRKLELLFARALSISPGAYYLRLRLQVA 283 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 LVR + M DIAL FDS +FSR +++ +G SP + R Sbjct: 284 HRLVRDSGIPMRDIALRCGFDSLSAFSRAYRREYGASPLKMR 325 >UniRef50_A3VW30 Transcriptional regulator, AraC family protein n=3 Tax=Roseovarius RepID=A3VW30_9RHOB Length = 337 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 2/105 (1%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 K + L +E NL P+SI +IA + S+R ++ FR G Y ++ R+ RA Sbjct: 224 KAVSDALAIMEDNLSEPLSITEIADQVDTSQRCLERRFRAVFETSPGHYYKQLRVRRAHH 283 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR--HRD 118 L++ T ++DIA + F S + S FKK +G +P ++R HR+ Sbjct: 284 LIQDTKLPLIDIATATGFGSTGTLSTAFKKFYGLTPSDFRGKHRE 328 >UniRef50_A8KXI5 Transcriptional regulator, AraC family n=73 Tax=Bacteria RepID=A8KXI5_FRASN Length = 342 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 54/100 (54%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 +L+ LL W+E N P++++D+A ++ S R + FR +++ + RL +A Sbjct: 232 SVLEPLLRWMEANCHRPLTVDDLAAQAMTSPRTLNRRFREQTGTTPSQWLHRVRLRQAQY 291 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L+ T S+ IA + F S +F F++L G SP+ YR Sbjct: 292 LLETTGHSVERIAAQVGFGSPTAFRDGFRRLVGTSPQAYR 331 >UniRef50_D0LVM9 Transcriptional regulator, AraC family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LVM9_HALO1 Length = 301 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 57/103 (55%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 K L LL + + +S+ +A+++G S ++Q F +Y R+ +L AA+ Sbjct: 6 KTLLPLLAQLSGERDKRVSLARLAEQTGLSPSHLQRTFARLAGESPKQYARRMQLECAAV 65 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 L+ T S+LDIAL+ FDS + F+R F K F SPRE+R R Sbjct: 66 LLLSTDDSILDIALASGFDSHEGFTRAFAKHFTRSPREFRVRG 108 >UniRef50_C7IHL6 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHL6_9CLOT Length = 290 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 57/98 (58%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + + + ++E NL I +++A+K+ S + Q +F VPL EYIR+RRL AA + Sbjct: 7 MNEAICYVEDNLAGEIDFDEVARKACCSTYHFQRMFSFITEVPLSEYIRRRRLTLAAFEL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + ++ ++++A ++S +F+R F+ L G +P R Sbjct: 67 QNSSVKVIELAFKYGYESPDAFTRAFQNLHGVTPTSAR 104 >UniRef50_A5KJJ5 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KJJ5_9FIRM Length = 398 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 63/117 (53%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 M + LT+++ + +L ++L ++ L P++IEDI + SR ++Q LF+ ++ Sbjct: 271 MNHKTLLTDSKSAQNDLLSEILAYMNKRLTEPLTIEDICHEFFISRSSLQALFKTHLNTS 330 Query: 61 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 Y+ +L ++ L+R ++ +IA L F S FSR FKK F +P +Y + Sbjct: 331 PKNYLLNIKLQKSKELIRENQYTISEIAYRLGFSSIHYFSRLFKKYFNTTPSDYARK 387 >UniRef50_Q30V01 Transcriptional regulator, AraC type n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30V01_DESDG Length = 308 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 70/129 (54%), Gaps = 3/129 (2%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 +E R +I++ +L W+E ++ +S++D+A ++ +S + +FR + YIR+ R Sbjct: 17 HETYRMRIMRAIL-WLEEHMNEAVSLDDMAAQAHFSPYHFHRIFRGVAGESVMAYIRRLR 75 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSF 129 L +A + + S+ DIA +++ ++FSR F+ FG SP R + A + P+ Sbjct: 76 LEKAVHRLAYGSASVTDIAFDAGYEAHEAFSRAFRAQFGMSPSALRR--HVRKAGMIPAG 133 Query: 130 LIRQQQKTE 138 ++ + T+ Sbjct: 134 VLGESAMTK 142 >UniRef50_C7IHS7 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHS7_9CLOT Length = 761 Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 34/98 (34%), Positives = 59/98 (60%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + ++L++I N + I+I +A+ G S +++ +F + + YI R+ A L+ Sbjct: 659 IMKILDYIHENYKKDIAINTLAEHVGLSYSHVRKIFNDETGENIVNYINNMRIEEAQRLL 718 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 R T ++ DIALSL ++++QSF+R FKK G +P EYR Sbjct: 719 RQTNMNINDIALSLGYNNKQSFNRFFKKYVGINPGEYR 756 >UniRef50_B8I4H6 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I4H6_CLOCE Length = 760 Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 65/110 (59%), Gaps = 3/110 (2%) Query: 10 NEMIR---QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 NEM + + + ++L++I N + I+I +A+ G S +++ +F + + YI Sbjct: 647 NEMFKVEGKSHIVKILDYIHKNYKKDIAINMLAEHVGLSYSHVRKIFNDETGENIVNYIN 706 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 R+ A L+R T ++ DIALSL ++++QSF+R FKK G +P EYR+ Sbjct: 707 NMRIEEAQRLLRQTNMNINDIALSLGYNNKQSFNRFFKKYVGINPGEYRN 756 >UniRef50_C7D6R0 Transcriptional regulator, AraC family n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D6R0_9RHOB Length = 341 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 58/102 (56%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 R + +L + N+E P+++ ++A +G SRR I+ FR + + R RL RA Sbjct: 237 RNPRVLSVLRAMYDNVETPLTLSELAASAGISRRQIERQFRQLLDEAPAQTYRNIRLDRA 296 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L+ T S+++IA++ F+S FSR +K+ +G +PR +R Sbjct: 297 RTLLMETNLSVIEIAMATGFNSNAVFSRHYKERYGETPRGHR 338 >UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDD0_BREBN Length = 298 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 56/92 (60%) Query: 24 WIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTAKS 83 +I+ + + IS+ DIA +G SR + LFR +++ +YI K R+ +A L+ T S Sbjct: 193 FIQAHYKETISLGDIANAAGLSRYYLINLFREYLNTTPLQYITKLRIEKAMDLLTQTNLS 252 Query: 84 MLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + DIAL++ + + F++ FKKL G SP ++R Sbjct: 253 VNDIALAIGYANANYFNKVFKKLIGTSPGQFR 284 >UniRef50_C5RJ15 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJ15_CLOCL Length = 290 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 58/107 (54%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 E M+ + + +IE NL+ I + ++A+++ S + +F +PL EYIR+R Sbjct: 4 EGVMVWLDRMNSAINYIEENLDGEIEMGEVARRACCSEYHFTRMFSFITDIPLNEYIRRR 63 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +L A ++ + ++D+A +DS SF+R F+ + G +P E R Sbjct: 64 KLTLAGFELKNSDIKIIDLANKYGYDSPNSFTRAFQGMHGVTPSEAR 110 >UniRef50_B9QTY6 Transcriptional regulator, AraC family protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QTY6_9RHOB Length = 328 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 57/103 (55%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 +K LQ L +E N+E P+ + D+A++ G S R+++ LF + + + +K RL +A Sbjct: 224 EKRLQNALRLMEANIEQPLRLADVAKEVGLSTRHLERLFTVYFNTTPSKLYKKIRLKKAH 283 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 V T ++IALS F S SFS +K +G +P + R R Sbjct: 284 AFVVDTHLQQIEIALSCGFGSAGSFSLAYKAEYGETPTQRRKR 326 >UniRef50_C3RHZ9 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RHZ9_9MOLU Length = 280 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 56/101 (55%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L +E+IE +L I E +A+ +G + Q F ++ L EYIRKRR+ AA+ + Sbjct: 7 LNTTIEYIENHLTEKIDYEQLAKIAGCPSYHFQKTFLYMTNISLSEYIRKRRISLAAVDL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 + ++DIAL ++S +F+R F+ + G +P R ++ Sbjct: 67 QTGEDKIIDIALKYGYESPTAFNRAFQAVHGIAPSLVRKKN 107 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 60/109 (55%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 E E R + L+ ++E+IE N PI ++ +A+ + S F+ EY+ Sbjct: 181 EQEGYRIERLKTVIEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSY 240 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 R+ +AA +R T ++++AL + F+S F+ F++ FGC+PREYR R Sbjct: 241 RVQQAASRLRQTDAKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSR 289 >UniRef50_A9D0S3 Transcription regulator n=3 Tax=Phyllobacteriaceae RepID=A9D0S3_9RHIZ Length = 334 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/100 (37%), Positives = 53/100 (53%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L + + +E +++ P+SI IA++ S R ++ LF M G Y RL A LV Sbjct: 226 LVRAVRIMETHIDAPLSIAAIARRVSMSARGLEQLFSRQMGETPGAYFLSLRLGAARRLV 285 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 T S+ DIA F SQ +FSR F++ FG SP + R R Sbjct: 286 NDTPLSVTDIASRTGFSSQPAFSRAFRRQFGLSPSQSRLR 325 >UniRef50_B0MA57 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MA57_9FIRM Length = 294 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 55/103 (53%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q I+ + L +IE N+ PI ++A+ S + + LF++ + EYI + R+ +A Sbjct: 189 QTIIMRTLAYIEENIAEPIDFNELARDENLSTNHFRKLFKDVTGLAPVEYINRLRITKAC 248 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 ++ + SM +IA ++ Q FSR FK GCSPR Y R Sbjct: 249 EHLQHSNLSMSEIAANVGIYDQNYFSRLFKNFMGCSPRHYIRR 291 >UniRef50_UPI0001C355CA AraC family regulatory protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C355CA Length = 327 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 60/101 (59%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 I++Q+ I NL+ I+I+ +A++ S +++ F+ + +Y+RK R+ RA+ L Sbjct: 219 IIRQVRRRITQNLQENITIDQLAREYCISPTSLKSNFKQVYSTTIKDYLRKVRMERASAL 278 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + T ++ DIA SL + +Q FS FK ++G +P EYR + Sbjct: 279 LLTTDSTVADIAASLGYTNQSKFSAAFKTVYGLAPAEYRKK 319 >UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AA81_9PORP Length = 287 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 57/96 (59%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L++ + +I N + I+I D+A ++G R ++ LF ++++ +Y+ + R+ +A L+ Sbjct: 189 LKKAISYIRLNYQSDITISDVASQTGVGERYLRKLFSQYLNLSPLDYLNQIRINKAIELL 248 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPRE 113 R T S+ ++ + F S Q FSR FK+ G SPRE Sbjct: 249 RNTEMSVKEVCFACGFQSPQYFSRIFKQQMGISPRE 284 >UniRef50_B5XU59 Transcriptional regulator, AraC family n=33 Tax=Gammaproteobacteria RepID=B5XU59_KLEP3 Length = 289 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 7/204 (3%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 Q++ +I +L+ P+S+E ++ + S + F + +PL YI+ RL RA + Sbjct: 14 FQRVCRYIARHLDEPLSLEALSAIAHSSPYHFHRQFSAYTGIPLYRYIQWLRLRRACWRL 73 Query: 78 RLTAKS-MLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW-DLANIFPSFLIRQQQ 135 + ++DIAL F + +SFSR F+ F SP ++R + W + P +++Q Sbjct: 74 AFNPRDKVIDIALDAGFQNAESFSRAFRTAFDQSPTQFRQQPDWAEWHRRVPKHTLQEQT 133 Query: 136 KTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEP 195 + +I+FP T I + ++ N + + R+ + +D + ++ +P Sbjct: 134 SMDVNIISFPTTRIAVLQHRGSPDLVNTTAARFIAWRK--TSGLSPVATSDTWGIAWDDP 191 Query: 196 STKSVDLLTVE---TFAGTVCEYA 216 T + + T AG V E A Sbjct: 192 QTTPQEAFRFDICGTVAGPVGENA 215 >UniRef50_Q89XQ2 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89XQ2_BRAJA Length = 321 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 61/98 (62%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L++++++++ NL +++E +A +G SR + FR + + EY+ KRR+ RA L+ Sbjct: 206 LKRVMQYVDDNLAAKVTLEHLAAVAGLSRMHFAAQFRAAVGIRPHEYLLKRRIERAQELL 265 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + S++DIAL++ F +Q F+ FK+ G +P ++R Sbjct: 266 QQADVSLVDIALTVGFQTQAHFTTVFKRFAGDTPYQWR 303 >UniRef50_C6C829 Transcriptional regulator, AraC family n=1 Tax=Dickeya dadantii Ech703 RepID=C6C829_DICDC Length = 131 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 58/103 (56%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 + ++ QQ +++ +L IS++++ Q G +R + LFR + ++R++RL +A Sbjct: 21 QDRLFQQACDYMLKHLCEKISLDNVCQAVGTNRNKLSALFRARCGYGVARWLREQRLKKA 80 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 A L+ LT S+ +A+ L F +F FK +G SPREYR Sbjct: 81 AELLYLTDMSVCLVAVELGFSDAANFCHSFKLKYGISPREYRQ 123 >UniRef50_B7GNV2 Transcriptional regulator, AraC family n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GNV2_BIFLI Length = 291 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 2/116 (1%) Query: 4 DKELTENEMIRQ--KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPL 61 ++E TE+E I Q ++++++ +++ + P+S ++QK GYSR + +F + V Sbjct: 172 NQEDTEDETILQDGRVIRRIRHYVQRHYREPLSTAQVSQKFGYSREHFSRIFSKYSGVTF 231 Query: 62 GEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 +Y+ + RL A L+ T + I F S Q+ F + F C+P EYR R Sbjct: 232 KDYVTRVRLLAACDLLTNTDMPINQIVRESGFPSSQTMRGSFDREFACTPSEYRSR 287 >UniRef50_A6VT03 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VT03_MARMS Length = 354 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 58/98 (59%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +++ ++ +E N+E P+SI+++ + G SRR I+ LF+ + V Y + RL A L+ Sbjct: 251 IKEAIKLMENNIEDPLSIDELIKLIGISRRQIERLFKINVGVTPARYYMEFRLTHARQLI 310 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + + S+ +I+++ F S FSR F K FG SP + R Sbjct: 311 QQSNLSIFEISIACGFVSSAHFSRTFHKFFGQSPMDSR 348 >UniRef50_Q03Q27 Transcriptional regulator, AraC family n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03Q27_LACBA Length = 362 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 57/98 (58%) Query: 22 LEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTA 81 +++I+ N++ PIS+ ++AQ++ S + LF+ ++HV EY+ +++ A + LT Sbjct: 171 IDYIQKNIQRPISLNEVAQRAYLSPSYLSRLFKKYLHVNFIEYVNNQKIALAQEKLSLTL 230 Query: 82 KSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 + I+ + F F++ FKK G +P E+R R++ Sbjct: 231 TPINQISNQIGFTQTSYFTKIFKKKTGITPSEFRQRNH 268 >UniRef50_A8I184 Transcriptional regulator n=3 Tax=Rhizobiales RepID=A8I184_AZOC5 Length = 310 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 57/100 (57%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +++++++I NL IS+ D++ + S + FR+ + VP +I RL RA ++ Sbjct: 208 MRRVIDYINDNLASEISLSDLSDIACLSHHHFARAFRSAVGVPPHRFISSLRLQRAQEML 267 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 T S+ +IA S F SQ +F+R F++ G SP EYR + Sbjct: 268 AHTQSSLTEIAYSCRFSSQSTFTRAFRRHVGMSPGEYRRK 307 >UniRef50_UPI0001C3592F AraC-like transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3592F Length = 284 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 65/111 (58%), Gaps = 4/111 (3%) Query: 11 EMIRQKI----LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 ++IRQKI L ++ E+++ + + P+S+E +A + G+S + +F+ + ++ +Y++ Sbjct: 161 DIIRQKIHLEKLSEITEYMKNHYDEPLSLEKVADRFGFSPTYLSRIFKRYANISYRDYLQ 220 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 R+ A + T + DIA++ F ++F++ F K +GC P EYR + Sbjct: 221 DLRVEYAVKEMVHTDHELGDIAVNHGFADSRAFAKAFAKRYGCLPSEYRKK 271 >UniRef50_C2LFG5 Transcriptional regulator n=6 Tax=Enterobacteriaceae RepID=C2LFG5_PROMI Length = 195 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 56/92 (60%) Query: 24 WIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTAKS 83 W+E L P++ DIA S +Q + + + + +Y+ ++RL ++A L++ T+ + Sbjct: 103 WLEDKLHMPLTASDIAGALNISISTLQRKVKAELGISIMQYVMQKRLAKSAELLKYTSLT 162 Query: 84 MLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + +IAL++ +DS +FS+ F++ F +P EYR Sbjct: 163 IENIALAVGYDSHSAFSQAFRQYFHKTPSEYR 194 >UniRef50_C6MNU8 Transcriptional regulator, AraC family n=1 Tax=Geobacter sp. M18 RepID=C6MNU8_9DELT Length = 262 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 53/98 (54%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 ++ + WI+ N ++++ +A + G SR + FR + + Y+ RRL A + Sbjct: 152 IRDICAWIDANSNQSVNLDALALRFGMSRSLLTREFRKYAGTSIVSYVNSRRLQNAGTAL 211 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 KS+L+++L F S +F ++FK L+G +P E+R Sbjct: 212 MSPGKSILEVSLDFGFVSLANFYKQFKSLYGMTPAEFR 249 >UniRef50_A6FWZ8 Transcriptional regulator, AraC family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FWZ8_9DELT Length = 318 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 8 TENEMIRQKILQQLLEWIECNLEHP--ISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYI 65 + N + +KI + + +E P ++++D+AQ +G S+ + F + + G Y+ Sbjct: 204 STNRVGHRKIARSVEYIRNLEVEGPSNVTLDDLAQVAGLSKYHFLRQFSQVVGMTPGAYL 263 Query: 66 RKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 R RLC AA +R T +L++ALS+ F SFSR F + G +P EY+ Sbjct: 264 RTLRLCHAARKLRTTDLPILEVALSVGFADHPSFSRAFARHMGMTPSEYQ 313 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77601 Putative HTH-type transcriptional regulator ykgA... 343 3e-93 UniRef50_D2TW49 Right origin-binding protein n=1 Tax=Arsenophonu... 217 2e-55 UniRef50_C8QBQ6 Transcriptional regulator, AraC family n=1 Tax=P... 206 5e-52 UniRef50_B5RA11 Putative transcriptional regulator n=35 Tax=Salm... 202 9e-51 UniRef50_P0ACI1 Right origin-binding protein n=101 Tax=Enterobac... 200 4e-50 UniRef50_C4X304 Right origin-binding protein n=9 Tax=cellular or... 199 7e-50 UniRef50_B4EY53 Right origin-binding protein n=55 Tax=Enterobact... 199 8e-50 UniRef50_D1P487 Right origin-binding protein n=2 Tax=Providencia... 198 1e-49 UniRef50_B6ICR1 Putative transcription regulator n=1 Tax=Escheri... 196 5e-49 UniRef50_B6XK96 Putative uncharacterized protein n=3 Tax=Enterob... 195 1e-48 UniRef50_C2LM40 Right origin-binding protein n=2 Tax=Proteus mir... 189 6e-47 UniRef50_B5XU59 Transcriptional regulator, AraC family n=33 Tax=... 189 6e-47 UniRef50_Q2NSQ1 Putative right origin-binding protein n=1 Tax=So... 188 2e-46 UniRef50_A9MRK1 Putative uncharacterized protein n=1 Tax=Salmone... 188 2e-46 UniRef50_B6ICR2 Putative transcription regulator n=1 Tax=Escheri... 183 5e-45 UniRef50_C6C946 Transcriptional regulator, AraC family n=3 Tax=D... 181 2e-44 UniRef50_B4EVW5 AraC-family transcriptional regulator n=3 Tax=Pr... 175 1e-42 UniRef50_A8G9B3 Transcriptional regulator, AraC family n=1 Tax=S... 169 8e-41 UniRef50_C8N9B6 AraC family transcriptional regulator n=1 Tax=Ca... 168 2e-40 UniRef50_B3IA10 LdaA n=1 Tax=Escherichia coli E22 RepID=B3IA10_E... 166 4e-40 UniRef50_Q9K766 Transcriptional regulator (AraC/XylS family) n=1... 165 1e-39 UniRef50_A8GJ26 Transcriptional regulator, AraC family n=2 Tax=S... 161 1e-38 UniRef50_Q9K6U1 Transcriptional regulator (AraC/XylS family) n=1... 161 2e-38 UniRef50_D0YAG4 Transcriptional regulator, AraC family n=6 Tax=K... 161 2e-38 UniRef50_B8FN17 Transcriptional regulator, AraC family n=1 Tax=D... 158 2e-37 UniRef50_A5G790 Transcriptional regulator, AraC family n=3 Tax=B... 157 3e-37 UniRef50_B8H068 Transcriptional regulator, AraC family n=13 Tax=... 157 3e-37 UniRef50_Q6WFA3 Putative transcription factor Roh n=1 Tax=Entero... 156 5e-37 UniRef50_B2K4J9 Transcriptional regulator, AraC family n=34 Tax=... 156 6e-37 UniRef50_C6J7H0 Transcriptional regulator n=1 Tax=Paenibacillus ... 156 6e-37 UniRef50_B8K3P3 Transcriptional activator n=2 Tax=Vibrio RepID=B... 156 8e-37 UniRef50_Q31GA4 Transcriptional regulator, AraC family n=3 Tax=P... 155 9e-37 UniRef50_C3LC07 Transcriptional regulator, AraC family n=7 Tax=B... 155 1e-36 UniRef50_D1UAH3 Transcriptional regulator, AraC family n=1 Tax=D... 155 2e-36 UniRef50_C6IVK7 AraC family transcriptional regulator n=1 Tax=Pa... 154 2e-36 UniRef50_C9NSU9 Putative uncharacterized protein n=1 Tax=Vibrio ... 154 2e-36 UniRef50_Q5WGK8 AraC/XylS family transcriptional regulator n=2 T... 154 3e-36 UniRef50_C1I964 Transcription activator n=1 Tax=Clostridium sp. ... 154 3e-36 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 153 4e-36 UniRef50_B7JL95 Transcriptional regulator, AraC family n=54 Tax=... 153 5e-36 UniRef50_A6D8X3 Putative uncharacterized protein n=1 Tax=Vibrio ... 153 5e-36 UniRef50_A7FVD8 Transcriptional regulator, AraC family n=4 Tax=C... 153 6e-36 UniRef50_C5BEG3 Transposon tn10 tetd protein (Orfr) n=2 Tax=Edwa... 153 6e-36 UniRef50_B7GST4 Transcription activator, effector binding n=1 Ta... 152 9e-36 UniRef50_A7GBT6 Transcriptional regulator, AraC family n=13 Tax=... 152 1e-35 UniRef50_UPI0001789679 transcriptional regulator, AraC family n=... 151 1e-35 UniRef50_C1DQ04 Transcriptional regulator, AraC family n=1 Tax=A... 151 1e-35 UniRef50_B8FSY0 Transcriptional regulator, AraC family n=6 Tax=C... 151 2e-35 UniRef50_B7HW35 Transcriptional regulator, AraC family n=34 Tax=... 151 2e-35 UniRef50_P0A9E4 Regulatory protein soxS n=98 Tax=Proteobacteria ... 151 2e-35 UniRef50_A6VR73 Helix-turn-helix-domain containing protein AraC ... 150 3e-35 UniRef50_A5V467 Transcriptional regulator, AraC family n=1 Tax=S... 150 3e-35 UniRef50_Q81BV9 Transcriptional regulator, AraC family n=72 Tax=... 150 3e-35 UniRef50_A8RX40 Putative uncharacterized protein n=1 Tax=Clostri... 150 4e-35 UniRef50_Q88KW6 Transcriptional regulator, AraC family n=11 Tax=... 150 5e-35 UniRef50_A8FAK8 Possible AraC family transcriptional regulator n... 150 5e-35 UniRef50_C6CRA3 Transcriptional regulator, AraC family n=8 Tax=B... 149 6e-35 UniRef50_B0N339 Putative uncharacterized protein n=1 Tax=Clostri... 149 6e-35 UniRef50_C6CRY2 Transcriptional regulator, AraC family n=69 Tax=... 149 8e-35 UniRef50_C8QFY6 Transcriptional regulator, AraC family n=3 Tax=E... 149 9e-35 UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32... 148 1e-34 UniRef50_Q30V01 Transcriptional regulator, AraC type n=1 Tax=Des... 148 1e-34 UniRef50_C1FU00 Transcriptional regulator, AraC family n=8 Tax=F... 148 2e-34 UniRef50_C0CY04 Putative uncharacterized protein n=2 Tax=Clostri... 148 2e-34 UniRef50_Q8A6I0 Transcriptional regulator, AraC-type n=21 Tax=Ba... 148 2e-34 UniRef50_B8I706 Transcriptional regulator, AraC family n=1 Tax=C... 147 2e-34 UniRef50_C6QRS7 Two component transcriptional regulator, AraC fa... 147 3e-34 UniRef50_B6R2M9 Transcriptional regulator, AraC family n=3 Tax=R... 147 4e-34 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 146 5e-34 UniRef50_A0KJN2 Transcriptional activator n=5 Tax=Gammaproteobac... 146 5e-34 UniRef50_A3VBK3 Transcriptional regulator, AraC family protein n... 146 6e-34 UniRef50_A6LYZ8 Transcription activator, effector binding n=1 Ta... 146 6e-34 UniRef50_P43463 HTH-type transcriptional activator aarP n=3 Tax=... 146 6e-34 UniRef50_UPI0001C357C1 AraC family transcription regulator n=1 T... 146 7e-34 UniRef50_A9KRP2 Transcriptional regulator, AraC family n=7 Tax=B... 146 7e-34 UniRef50_A6GAG6 Transcriptional regulator, AraC type n=1 Tax=Ple... 146 8e-34 UniRef50_C2LMQ2 Regulatory protein n=1 Tax=Proteus mirabilis ATC... 145 9e-34 UniRef50_C9NSN9 Transcriptional regulator AraC family n=1 Tax=Vi... 145 9e-34 UniRef50_D1ARB2 Transcriptional regulator, AraC family n=1 Tax=S... 145 1e-33 UniRef50_A8FAK9 Transcriptional regulator n=3 Tax=Bacillus RepID... 145 1e-33 UniRef50_A4B9Y7 Putative uncharacterized protein n=1 Tax=Reineke... 145 1e-33 UniRef50_C6XP49 Transcriptional regulator, AraC family with acet... 145 1e-33 UniRef50_A6M0I1 Helix-turn-helix-domain containing protein, AraC... 145 1e-33 UniRef50_A8I184 Transcriptional regulator n=3 Tax=Rhizobiales Re... 145 2e-33 UniRef50_A5W8X4 Transcriptional regulator, AraC family n=13 Tax=... 145 2e-33 UniRef50_A6GKR6 Transcriptional regulator, AraC family protein n... 145 2e-33 UniRef50_B4WW69 Transcriptional regulator, AraC family protein n... 144 2e-33 UniRef50_C8P1I3 AraC family transcriptional regulator n=1 Tax=Er... 144 2e-33 UniRef50_C3RPB0 AraC-family transcriptional regulator n=3 Tax=Ba... 144 2e-33 UniRef50_UPI0001C368D7 AraC-family transcriptional regulator n=2... 144 2e-33 UniRef50_P28816 Transposon Tn10 tetD protein n=29 Tax=root RepID... 144 2e-33 UniRef50_A9KM10 Transcriptional regulator, AraC family n=1 Tax=C... 144 3e-33 UniRef50_C5RJ15 Transcriptional regulator, AraC family n=1 Tax=C... 144 3e-33 UniRef50_B2VKB8 Regulatory protein SoxS n=1 Tax=Erwinia tasmanie... 144 3e-33 UniRef50_A4BA46 Transcriptional regulator, AraC family protein n... 143 3e-33 UniRef50_C4UL45 Putative uncharacterized protein n=1 Tax=Yersini... 143 3e-33 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 143 3e-33 UniRef50_C9PI32 Arginine pathway regulatory protein ArgR repress... 143 4e-33 UniRef50_B8CLS6 Transcriptional regulator, AraC family n=1 Tax=S... 143 5e-33 UniRef50_B7LRE5 Putative uncharacterized protein n=1 Tax=Escheri... 143 5e-33 UniRef50_A6UD97 Transcription activator effector binding n=14 Ta... 143 5e-33 UniRef50_Q24TQ4 Putative uncharacterized protein n=2 Tax=Clostri... 143 5e-33 UniRef50_UPI0001B9EE80 transcriptional regulator, AraC family n=... 143 5e-33 UniRef50_A6W3J7 Transcription activator effector binding n=1 Tax... 143 5e-33 UniRef50_C6BZC0 Transcriptional regulator, AraC family n=1 Tax=D... 143 6e-33 UniRef50_Q48413 Transcriptional activator ramA n=51 Tax=Bacteria... 143 6e-33 UniRef50_C8ZY41 AraC family transcriptional regulator n=1 Tax=En... 143 6e-33 UniRef50_A9KR18 Transcriptional regulator, AraC family n=3 Tax=F... 143 6e-33 UniRef50_C3BTE5 Transcriptional regulator, AraC n=1 Tax=Bacillus... 143 6e-33 UniRef50_B0C4S9 Transcriptional Regulator, AraC family n=1 Tax=A... 142 7e-33 UniRef50_C5EQJ6 AraC-family transcriptional regulator n=1 Tax=Cl... 142 8e-33 UniRef50_C9YDH7 Putative uncharacterized protein n=1 Tax=Curviba... 142 9e-33 UniRef50_Q17ZV7 AraC-family transcriptional regulator n=7 Tax=Ba... 142 9e-33 UniRef50_Q18D16 AraC-family transcriptional regulator n=6 Tax=Cl... 142 9e-33 UniRef50_Q180J9 AraC-family transcriptional regulator n=4 Tax=Cl... 142 1e-32 UniRef50_A8UPH5 Transcriptional regulator, AraC-type n=3 Tax=Fla... 142 1e-32 UniRef50_C6CRD1 Transcriptional regulator, AraC family n=2 Tax=F... 142 1e-32 UniRef50_P96662 Uncharacterized HTH-type transcriptional regulat... 142 1e-32 UniRef50_B7VRB4 Transcription activator n=6 Tax=Vibrionales RepI... 141 2e-32 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 141 2e-32 UniRef50_Q2B3U5 Transcriptional regulator (AraC/XylS family) pro... 141 2e-32 UniRef50_D0YX27 Hypothetical transcription regulator n=1 Tax=Pho... 141 2e-32 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 141 2e-32 UniRef50_A4BJ15 Transcriptional regulator containing an amidase ... 141 2e-32 UniRef50_D1NY75 Multiple antibiotic resistance protein MarA n=5 ... 141 2e-32 UniRef50_Q1QYW4 Transcriptional regulator, AraC family with amid... 141 2e-32 UniRef50_Q48G15 Transcriptional regulator ArgR n=24 Tax=Pseudomo... 141 3e-32 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 140 3e-32 UniRef50_A7JZZ4 Putative uncharacterized protein n=3 Tax=Vibrio ... 140 3e-32 UniRef50_C0D9U5 Putative uncharacterized protein n=1 Tax=Clostri... 140 3e-32 UniRef50_C7IEN8 Transcriptional regulator, AraC family n=1 Tax=C... 140 4e-32 UniRef50_Q18AY3 AraC-family transcriptional regulator n=15 Tax=B... 140 4e-32 UniRef50_A6LX85 Transcription activator, effector binding n=2 Ta... 140 4e-32 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 140 4e-32 UniRef50_UPI0001787EAC transcriptional regulator, AraC family n=... 140 5e-32 UniRef50_A8LK68 HTH-type transcriptional regulator n=43 Tax=Rhod... 140 5e-32 UniRef50_A3ZMZ0 Transcriptional regulator, AraC family protein n... 140 5e-32 UniRef50_A6EIJ9 Transcriptional regulator, AraC family protein n... 140 5e-32 UniRef50_Q49JG3 LdaA n=9 Tax=Enterobacteriaceae RepID=Q49JG3_ECOLX 140 5e-32 UniRef50_D0Y1I0 Transcriptional regulator, AraC family n=1 Tax=C... 140 5e-32 UniRef50_Q72FD7 Transcriptional regulator, AraC family n=3 Tax=D... 140 6e-32 UniRef50_C1D8X9 Putative uncharacterized protein n=1 Tax=Laribac... 139 7e-32 UniRef50_B9YCD3 Putative uncharacterized protein n=3 Tax=Firmicu... 139 7e-32 UniRef50_B9QW22 DJ-1/PfpI family n=2 Tax=Labrenzia RepID=B9QW22_... 139 7e-32 UniRef50_Q52620 Regulatory protein pqrA n=6 Tax=Enterobacteriace... 139 8e-32 UniRef50_B8FUU7 Transcriptional regulator, AraC family n=2 Tax=D... 139 9e-32 UniRef50_A8GD44 Transcriptional regulator, AraC family n=9 Tax=E... 139 9e-32 UniRef50_B7K731 Transcriptional regulator, AraC family n=2 Tax=C... 139 9e-32 UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=C... 139 9e-32 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 139 9e-32 UniRef50_B0KTA0 Transcriptional regulator, AraC family n=2 Tax=P... 139 9e-32 UniRef50_A6FWZ8 Transcriptional regulator, AraC family protein n... 139 1e-31 UniRef50_A8GHJ0 Transcriptional regulator, AraC family n=1 Tax=S... 139 1e-31 UniRef50_A6VYP8 Transcriptional regulator, AraC family n=7 Tax=G... 138 1e-31 UniRef50_A4B8V7 Transcriptional regulator, AraC family protein n... 138 1e-31 UniRef50_B9Z4B5 Transcriptional regulator, AraC family n=1 Tax=L... 138 1e-31 UniRef50_B9JE85 Transcriptional regulator protein n=1 Tax=Agroba... 138 1e-31 UniRef50_Q64RP2 AraC-type transcriptional regulator n=6 Tax=Bact... 138 1e-31 UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=C... 138 1e-31 UniRef50_A8TTK0 Transcriptional regulator, AraC family protein n... 138 1e-31 UniRef50_B5EUU0 Transcriptional regulator, AraC family n=3 Tax=A... 138 1e-31 UniRef50_A4Z280 Putative transcriptional regulator, AraC family ... 138 1e-31 UniRef50_D1PRZ9 DNA-bindng response regulator, AraC family n=2 T... 138 2e-31 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 138 2e-31 UniRef50_A9BU22 Transcriptional regulator, AraC family n=2 Tax=P... 138 2e-31 UniRef50_B2JCG9 Transcriptional regulator, AraC family n=52 Tax=... 138 2e-31 UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clost... 138 2e-31 UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=B... 138 2e-31 UniRef50_Q989Y4 Transcriptional regulator n=2 Tax=Rhizobiales Re... 138 2e-31 UniRef50_C1I6N3 Transcriptional regulator n=1 Tax=Clostridium sp... 138 2e-31 UniRef50_A3Y825 Transcriptional regulator, AraC family protein n... 138 2e-31 UniRef50_A0Z695 Transcriptional regulator, AraC family protein n... 138 2e-31 UniRef50_A6LY67 Helix-turn-helix-domain containing protein, AraC... 138 2e-31 UniRef50_A1ZNF5 Transcriptional regulator n=1 Tax=Microscilla ma... 138 2e-31 UniRef50_C5ERZ6 Right origin-binding protein n=1 Tax=Clostridial... 138 2e-31 UniRef50_B8I0Z7 Transcriptional regulator, AraC family n=3 Tax=C... 137 2e-31 UniRef50_C6C8M9 Transcriptional regulator, AraC family n=44 Tax=... 137 2e-31 UniRef50_A8MJ72 Transcriptional regulator, AraC family n=1 Tax=A... 137 3e-31 UniRef50_A6VUB3 Transcriptional regulator, AraC family n=3 Tax=P... 137 3e-31 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 137 4e-31 UniRef50_C0ET05 Putative uncharacterized protein n=2 Tax=Firmicu... 137 4e-31 UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coproco... 137 4e-31 UniRef50_B9Z8M5 Transcriptional regulator, AraC family n=1 Tax=L... 137 4e-31 UniRef50_C5RQY0 Transcriptional regulator, AraC family n=1 Tax=C... 136 4e-31 UniRef50_A3SQW3 Transcriptional regulator, AraC family protein n... 136 4e-31 UniRef50_C3RHZ9 Transcriptional regulator n=2 Tax=Bacteria RepID... 136 4e-31 UniRef50_A8TRB7 Probable transcriptional regulator n=1 Tax=alpha... 136 5e-31 UniRef50_C4ZHQ7 Transcriptional regulator, AraC family n=2 Tax=C... 136 5e-31 UniRef50_A9KJQ6 Transcriptional regulator, AraC family n=2 Tax=C... 136 5e-31 UniRef50_B3RBG6 Putative transcriptional Regulator, AraC n=1 Tax... 136 5e-31 UniRef50_B2VHH7 Putative transcriptional regulator n=1 Tax=Erwin... 136 5e-31 UniRef50_UPI0001973804 AraC-family transcriptional regulator n=1... 136 5e-31 UniRef50_C7IHL6 Transcriptional regulator, AraC family n=1 Tax=C... 136 6e-31 UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostri... 136 7e-31 UniRef50_Q2BBL2 Transcriptional regulator, AraC family protein n... 136 7e-31 UniRef50_UPI00019685E3 hypothetical protein BACCELL_00469 n=1 Ta... 136 7e-31 UniRef50_C9XKB1 AraC-family transcriptional regulator n=18 Tax=C... 136 7e-31 UniRef50_A3YG62 Transcriptional regulator, AraC family protein n... 136 7e-31 Sequences not found previously or not previously below threshold: UniRef50_B1HRP5 Transcriptional regulator, AraC/XylS family n=3 ... 156 5e-37 UniRef50_B2HTR6 DNA gyrase inhibitor n=6 Tax=Proteobacteria RepI... 154 2e-36 UniRef50_UPI0001C36EC6 transcriptional regulator, AraC family pr... 153 4e-36 UniRef50_C5RP62 Transcriptional regulator, AraC family n=1 Tax=C... 148 1e-34 UniRef50_B0C3V1 Transcriptional Regulator, AraC family n=5 Tax=C... 148 1e-34 UniRef50_C0A4C8 Helix-turn-helix-domain containing protein AraC ... 148 2e-34 UniRef50_A6M032 Transcription activator, effector binding n=19 T... 148 2e-34 UniRef50_A4BA20 Transcriptional regulator, AraC family protein n... 147 3e-34 UniRef50_C4XUB5 AraC family transcriptional regulator n=1 Tax=De... 147 3e-34 UniRef50_A9KFE4 Transcriptional regulator, AraC family n=4 Tax=P... 146 7e-34 UniRef50_Q97LX8 Transcriptional regulator (HTH_ARAC-domain) n=1 ... 146 7e-34 UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostri... 145 1e-33 UniRef50_C6IS69 Transcriptional regulator n=11 Tax=Bacteroides R... 145 1e-33 UniRef50_B3QWJ9 Transcriptional regulator, AraC family n=2 Tax=B... 145 2e-33 UniRef50_C5D8H7 Two component transcriptional regulator, AraC fa... 144 3e-33 UniRef50_B0C647 Transcriptional Regulator, AraC family n=1 Tax=A... 143 3e-33 UniRef50_A4XMF1 Two component transcriptional regulator, AraC fa... 143 5e-33 UniRef50_B7DU32 Transcriptional regulator, AraC family n=1 Tax=A... 143 5e-33 UniRef50_B2TL55 Transcriptional regulator, AraC/XylS family n=2 ... 142 1e-32 UniRef50_Q13QC7 Transcriptional regulator, AraC family n=5 Tax=B... 142 1e-32 UniRef50_B8DRY5 Transcriptional regulator, AraC family n=1 Tax=D... 141 2e-32 UniRef50_B9MLQ2 Two component transcriptional regulator, AraC fa... 141 3e-32 UniRef50_Q12JT5 Transcriptional regulator, AraC family n=9 Tax=G... 140 3e-32 UniRef50_C6LLK3 Putative two-component response regulator n=1 Ta... 140 3e-32 UniRef50_Q8YSB8 Transcriptional regulator n=2 Tax=Nostocaceae Re... 140 4e-32 UniRef50_A6UK12 Helix-turn-helix-domain containing protein AraC ... 140 4e-32 UniRef50_B4WTP1 Transcriptional regulator, AraC family protein n... 140 5e-32 UniRef50_B2IKR9 Transcriptional regulator, AraC family n=4 Tax=R... 140 5e-32 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 140 6e-32 UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=... 139 8e-32 UniRef50_B0SZN8 Transcriptional regulator, AraC family n=11 Tax=... 139 9e-32 UniRef50_UPI0001AF3354 AraC family transcriptional regulator n=1... 139 9e-32 UniRef50_C6CRZ9 Two component transcriptional regulator, AraC fa... 138 1e-31 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 138 1e-31 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 138 2e-31 UniRef50_C9XX01 Putative uncharacterized protein n=1 Tax=Cronoba... 138 2e-31 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 138 2e-31 UniRef50_A9GLA7 Transcriptional regulator, AraC family n=1 Tax=S... 138 2e-31 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 138 2e-31 UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=A... 137 2e-31 UniRef50_C7M7E1 Transcriptional regulator, AraC family n=2 Tax=B... 137 3e-31 UniRef50_B2SZ92 Transcriptional regulator, AraC family n=12 Tax=... 137 3e-31 UniRef50_B1QUU6 Two-component response regulator n=3 Tax=Clostri... 137 3e-31 UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp... 137 3e-31 UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bactero... 137 3e-31 UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas Re... 136 4e-31 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 136 4e-31 UniRef50_Q46N77 Transcriptional regulator, AraC family n=1 Tax=R... 136 4e-31 UniRef50_A8RMQ2 Putative uncharacterized protein n=1 Tax=Clostri... 136 5e-31 UniRef50_Q1D535 Transcriptional regulator, AraC family n=1 Tax=M... 136 6e-31 UniRef50_C6PVM8 Transcriptional regulator, AraC family n=3 Tax=C... 136 6e-31 UniRef50_A9HPW1 Transcriptional regulator, AraC family protein n... 136 7e-31 >UniRef50_P77601 Putative HTH-type transcriptional regulator ykgA n=49 Tax=Enterobacteriaceae RepID=YKGA_ECOLI Length = 239 Score = 343 bits (880), Expect = 3e-93, Method: Composition-based stats. Identities = 239/239 (100%), Positives = 239/239 (100%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP Sbjct: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 Query: 61 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW Sbjct: 61 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 Query: 121 DLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM 180 DLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM Sbjct: 121 DLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM 180 Query: 181 KNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWTQA 239 KNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWTQA Sbjct: 181 KNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWTQA 239 >UniRef50_D2TW49 Right origin-binding protein n=1 Tax=Arsenophonus nasoniae RepID=D2TW49_9ENTR Length = 305 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 111/213 (52%), Gaps = 2/213 (0%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + I++ LL WI+ +L+ P+ ++++A K+GYS+ ++Q +F+N +G YIR RRL Sbjct: 1 MDQNNIIRDLLYWIDTHLDQPLFLDNVAAKAGYSKWHLQRMFKNITQQAIGSYIRARRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 RAA+ +RLT++ +LDIAL FDSQQ+F+R FKK FG +P YR + W + P + Sbjct: 61 RAAVALRLTSRPILDIALQYRFDSQQTFTRAFKKQFGITPALYRRSEDWCATGMQPPITL 120 Query: 132 RQQQKTECRLINFPETPIFGN--SFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 +Q+ + + G + Y +E + + E K + KN ++Y Sbjct: 121 EEQKLPNVSFVTLTPKHLMGIEQTCSYILEEWSTACAEMRKHFWQYYQDKAKNIPNEVYG 180 Query: 190 VSTFEPSTKSVDLLTVETFAGTVCEYADMPKEW 222 + S++ + TV +YAD Sbjct: 181 LHRVVHSSEKDEEQTVLYITAVEPQYADNKNNL 213 >UniRef50_C8QBQ6 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QBQ6_9ENTR Length = 288 Score = 206 bits (525), Expect = 5e-52, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 7/223 (3%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 ++++ + L++WIE NL ++I+ I+ KSGYS+ ++Q +F+ L Y RKRRL Sbjct: 6 LKKQYINDLVDWIEANLTDELNIDLISLKSGYSKWHMQRMFKEMTGQTLASYTRKRRLTM 65 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIR 132 +A+ +RLT ++DIA+ FD+QQ+F+R FK F +P YR L + F S + Sbjct: 66 SAMALRLTRMPLIDIAVRFGFDNQQNFTRVFKNHFSLTPGAYRRIPELQLKD-FHSRIPT 124 Query: 133 QQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRH--HLARCMKNFKTDIYFV 190 Q + + RL PE + G +++ D + +H + Sbjct: 125 QHRWVDVRLAEKPELRLCGEVIEWECRFGEYIHDHGDVVAQHARDFVAFAGQHVNKGWLG 184 Query: 191 STFEPSTKSVDLLTVETFAGTVCEYAD-MPK---EWTTTRGLY 229 F P S D + F ++ D +P WT GLY Sbjct: 185 FQFSPGEGSADQQHISLFQALESQHGDVLPSNVVNWTGESGLY 227 >UniRef50_B5RA11 Putative transcriptional regulator n=35 Tax=Salmonella enterica RepID=B5RA11_SALG2 Length = 285 Score = 202 bits (514), Expect = 9e-51, Method: Composition-based stats. Identities = 74/227 (32%), Positives = 123/227 (54%), Gaps = 4/227 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M+++ I+ +LE IE NLE I IE + +GYSRR++Q F+ V +G+YIR+R+L Sbjct: 2 MMKKAIIISVLEQIEKNLEERIDIEKLVVITGYSRRSLQDFFKEKCGVSIGKYIRQRKLS 61 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 R+A L++LT++S+ DIA + FDS QS+SRE KK FG +P YR D+WDL N+ P + + Sbjct: 62 RSATLLKLTSQSVTDIAFRMGFDSVQSYSRELKKTFGVNPNNYRKADFWDLRNLRPPYWL 121 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVS 191 + + + IFG + I +N P + ++ + ++ + ++Y +S Sbjct: 122 DCDEHYQFEICQLTSKEIFGFQTSHQIA-TNDLPKKASPIKWKIIHETLRTWGENVYCLS 180 Query: 192 TFEPSTKSVDLLTVETFAGTVCEYAD---MPKEWTTTRGLYDPTHVI 235 +F+P ++ V +F G D +P G Y H + Sbjct: 181 SFKPDNTKDQVIAVSSFFGMEHNSVDGGKIPMSRVIKCGKYAKFHFV 227 >UniRef50_P0ACI1 Right origin-binding protein n=101 Tax=Enterobacteriaceae RepID=ROB_ECO57 Length = 289 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 4/209 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + I++ LL W+E +L+ P+S++++A K+GYS+ ++Q +F++ +G YIR RRL Sbjct: 1 MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 ++A+ +RLTA+ +LDIAL FDSQQ+F+R FKK F +P YR W I P + Sbjct: 61 KSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRL 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVS 191 + E + + +TP+ G + Y + S D ++R + N T + Sbjct: 121 GEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQIS-DFRHEMRYQFWHDFLGNAPTIPPVLY 179 Query: 192 TF---EPSTKSVDLLTVETFAGTVCEYAD 217 PS D V + AD Sbjct: 180 GLNETRPSQDKDDEQEVFYTTALAQDQAD 208 >UniRef50_C4X304 Right origin-binding protein n=9 Tax=cellular organisms RepID=C4X304_KLEPN Length = 289 Score = 199 bits (506), Expect = 7e-50, Method: Composition-based stats. Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 8/225 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + I++ LL W+E +L+ P+S++++A K+GYS+ ++Q +F++ +G YIR RRL Sbjct: 1 MDQAGIIRDLLSWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 ++A+ +RLTA+ +LDIAL FDSQQ+F+R FKK F +P YR W + P + Sbjct: 61 KSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFSLTPALYRRSPDWSSFGMRPPLRL 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM---KNFKTDIY 188 + + I P T + G + Y ++ S ++R + + +Y Sbjct: 121 GEFTLPKHEFITLPPTQLLGVTQSYTCKLEEISDFRN-QMRVQFWRDFLGNSPSIPPVLY 179 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVCEYAD----MPKEWTTTRGLY 229 + PS + D V E A+ T G Y Sbjct: 180 GLHEPRPSLEKDDEQEVFYTTALTPEMANGHLQHAHPVTLEGGEY 224 >UniRef50_B4EY53 Right origin-binding protein n=55 Tax=Enterobacteriaceae RepID=B4EY53_PROMH Length = 300 Score = 199 bits (506), Expect = 8e-50, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 2/208 (0%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + I++ LL W++ NL+ P+S++++A K+GYS+ ++Q +F+ +G YIR RRL Sbjct: 1 MDQTNIIRDLLAWLDNNLDQPLSLDNVATKAGYSKWHLQRMFKEVTGQAIGSYIRSRRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 RAA+ +RLT++ +LDIAL FDSQQ+F+R FKK F +P YR D W I P + Sbjct: 61 RAAVALRLTSRPILDIALQYRFDSQQTFTRAFKKQFDRTPALYRRSDEWCAVGICPPIKL 120 Query: 132 RQQQKTECRLINFPETPIFGN--SFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 Q + + PE + G + + +E + + + + + ++Y Sbjct: 121 DPQPLPKWEYVQLPEIKLIGIEQTCSHTLEQWANACSDMRQTFWQNYITKVNTIPHEVYG 180 Query: 190 VSTFEPSTKSVDLLTVETFAGTVCEYAD 217 + + S + D V YA Sbjct: 181 LHHTQHSDEHEDEQRVIYTTAVEPAYAS 208 >UniRef50_D1P487 Right origin-binding protein n=2 Tax=Providencia RepID=D1P487_9ENTR Length = 295 Score = 198 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 67/224 (29%), Positives = 119/224 (53%), Gaps = 8/224 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M+++ ++++++ WIE NLE +S++ +A KSGY++ + Q LF+N + LG YIR RRL Sbjct: 1 MLQESVIREIILWIEQNLESRLSLDTVADKSGYTKWHFQRLFKNQTGLALGSYIRARRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 +A+ +RLT S++DI+L FDSQQ+F R FKK FG +P EYR R W + Sbjct: 61 CSAVALRLTNDSIMDISLRYRFDSQQTFCRAFKKQFGVTPSEYRKRTGWHIEGFCLPLRE 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM---KNFKTDIY 188 ++ + + +L+ PE + G + +Y ++ + E +LR+ + + K ++Y Sbjct: 121 SKELQAQVQLVELPEINLLGMTHRYTQGINEWNLKTE-ELRKQYWRTFLDKNKLVAQNLY 179 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVCEYADMP---KEWTTTRGLY 229 + + +++ T + A +P K G Y Sbjct: 180 AIHGVDTASEEEGRFLYSTAFN-EQDMATVPPFSKSLKVPAGNY 222 >UniRef50_B6ICR1 Putative transcription regulator n=1 Tax=Escherichia coli SE11 RepID=B6ICR1_ECOSE Length = 294 Score = 196 bits (499), Expect = 5e-49, Method: Composition-based stats. Identities = 79/224 (35%), Positives = 123/224 (54%), Gaps = 5/224 (2%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M++ I+ +L WIE ++E I IED+ SGYSRR IQ LF+ + LG Y+++RRLC Sbjct: 1 MLQTMIINDILIWIENHIEDGIIIEDVVNLSGYSRRYIQYLFKKETGLSLGGYLKRRRLC 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 R A+ VRLT MLDIA+ L FDSQQSFSREFKK+F C P YR RDYWDL+ + P + Sbjct: 61 RGAMYVRLTTMRMLDIAVRLRFDSQQSFSREFKKVFNCPPYIYRTRDYWDLSCLCPPWEY 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVS 191 + + P+ G+ F Y+ + + +R ++ M+ + + +++ Sbjct: 121 NMTGIPKVDFVRLPQLSYSGHMFSYNENILGTRGE---AVREKNITNDMRLYSENFLYIT 177 Query: 192 TFEPSTKSVDLLTVETFAGTVCEYADMP--KEWTTTRGLYDPTH 233 + PS K+ + + ++TF+ + + G Y T+ Sbjct: 178 YYSPSIKNSENVFIKTFSCPQENEERKCNNQNISIPAGEYLKTY 221 >UniRef50_B6XK96 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B6XK96_9ENTR Length = 310 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 64/225 (28%), Positives = 114/225 (50%), Gaps = 10/225 (4%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M+++ ++++++ WIE NLE +S++ +A KSGY++ + Q LF+ + LG YIR RRL Sbjct: 17 MLQESVIREIILWIEQNLESRLSLDTVADKSGYTKWHFQRLFKTQTGLALGAYIRARRLS 76 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 +A+ +RLT S++DI+L FDSQQ+F R FKK FG +P EYR R W + Sbjct: 77 CSAVALRLTNDSIMDISLRYRFDSQQTFCRAFKKQFGVTPSEYRKRTGWHIEGFRLPLRE 136 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM---KNFKTDIY 188 ++ + +L+ + + G + +Y ++ + E +LRR + + K ++Y Sbjct: 137 SKELEAHVQLVELKDIHLVGMTHRYTQGINEWNLKTE-ELRRQYWKNFLDKNKLVAQNLY 195 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVCEYAD----MPKEWTTTRGLY 229 + + T S + + + K+ G Y Sbjct: 196 AIHGVD--TTSDEEGRFLYSTAFEENALEVIPPLTKKLMVPAGNY 238 >UniRef50_C2LM40 Right origin-binding protein n=2 Tax=Proteus mirabilis RepID=C2LM40_PROMI Length = 298 Score = 189 bits (481), Expect = 6e-47, Method: Composition-based stats. Identities = 68/223 (30%), Positives = 120/223 (53%), Gaps = 6/223 (2%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M+++ +++ ++ WIE NL+ +S++ IA+KSGY++ + Q LF+ + + LG+Y+ RRL Sbjct: 1 MLQENVVKDIIVWIEQNLDSRLSLDIIAEKSGYTKWHFQRLFKAYTGISLGKYVLARRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 A +R+T S+LDI+L HFDSQQ+F R FKK F +P EYR + WD++ + L Sbjct: 61 CGAYALRITRSSLLDISLKYHFDSQQTFCRAFKKQFNITPSEYRKKQGWDISELIFPALE 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMK---NFKTDIY 188 + K + ++ P + G + +Y+ +S + D++ K R+ + +K T++Y Sbjct: 121 TVELKAKYEVMTLPSKELIGMAHQYNKNISAWNYDKK-KFRKEFWKKFLKEIHTIPTEMY 179 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDP 231 +T S S+D T E +T + P Sbjct: 180 --ATHRASAGSLDDTTYIYTTAVSKEQLTSSANISTMSNVELP 220 >UniRef50_B5XU59 Transcriptional regulator, AraC family n=33 Tax=Gammaproteobacteria RepID=B5XU59_KLEP3 Length = 289 Score = 189 bits (481), Expect = 6e-47, Method: Composition-based stats. Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 7/205 (3%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 Q++ +I +L+ P+S+E ++ + S + F + +PL YI+ RL RA Sbjct: 13 RFQRVCRYIARHLDEPLSLEALSAIAHSSPYHFHRQFSAYTGIPLYRYIQWLRLRRACWR 72 Query: 77 VR-LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLAN-IFPSFLIRQQ 134 + ++DIAL F + +SFSR F+ F SP ++R + W + P +++Q Sbjct: 73 LAFNPRDKVIDIALDAGFQNAESFSRAFRTAFDQSPTQFRQQPDWAEWHRRVPKHTLQEQ 132 Query: 135 QKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFE 194 + +I+FP T I + ++ N + + R+ + +D + ++ + Sbjct: 133 TSMDVNIISFPTTRIAVLQHRGSPDLVNTTAARFIAWRK--TSGLSPVATSDTWGIAWDD 190 Query: 195 PSTKSVDLLTVE---TFAGTVCEYA 216 P T + + T AG V E A Sbjct: 191 PQTTPQEAFRFDICGTVAGPVGENA 215 >UniRef50_Q2NSQ1 Putative right origin-binding protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NSQ1_SODGM Length = 201 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 1/188 (0%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + I+Q LL W+E +L+ P+++ +A++SGYS+ ++Q F+ +G YIR RRL Sbjct: 1 MDQAGIIQDLLSWLEGHLDTPLTLNRVAERSGYSKWHLQRKFKLATGQAIGAYIRARRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 RA + +RLT++S+ DIAL FDSQQ+F+R FKK F +P YR W ++P + Sbjct: 61 RAVLALRLTSRSVADIALQYGFDSQQTFTRPFKKQFIQTPALYRRSRKWHFLGMYPPYRF 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVS 191 + + + + G S Y + S + LR H + + T + Sbjct: 121 DSRPLPQAEFVTLQVMTLIGTSQSYTCTLEQLS-EYRTNLRSHFWRQFLAAMPTKPPVLY 179 Query: 192 TFEPSTKS 199 P +S Sbjct: 180 GLSPHRRS 187 >UniRef50_A9MRK1 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MRK1_SALAR Length = 286 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 4/206 (1%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 +KI+Q + WIE ++E +I+D+ +GYSRR +QL+F+ VP+G Y+R+R++CR Sbjct: 3 YEKKIVQHFVRWIEDHIEEDKTIDDLVNYTGYSRRAVQLMFKKEYGVPVGTYMRQRKMCR 62 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIR 132 AA L+RLT S+++IA +HF Q+F R FK F +P EYR+ WDL+ + P+ I Sbjct: 63 AATLLRLTKLSVIEIAHRVHFSGTQNFGRAFKHAFNMTPTEYRNLPSWDLSLLVPAINID 122 Query: 133 QQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVST 192 + ++ + G+ Y ++ E + R + + +KT+I S Sbjct: 123 NCWNVDSCIVERSGIYVSGDECFYQQKILRTPTLESKRNRLKKIRHYSELYKTNIVIASN 182 Query: 193 FEPSTKSV----DLLTVETFAGTVCE 214 F P D++ + +G E Sbjct: 183 FLPPKNRYSAIRDVIDITMLSGVEVE 208 >UniRef50_B6ICR2 Putative transcription regulator n=1 Tax=Escherichia coli SE11 RepID=B6ICR2_ECOSE Length = 276 Score = 183 bits (464), Expect = 5e-45, Method: Composition-based stats. Identities = 77/223 (34%), Positives = 126/223 (56%), Gaps = 11/223 (4%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 + I + I+Q ++ WIE N+E I IED+A +GY RRN+QL+F+ ++H+ LGEYIR Sbjct: 1 MHNRHTIDRLIVQHIILWIEDNIESTIKIEDVATITGYCRRNVQLIFKRYVHISLGEYIR 60 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIF 126 +R++ RAA L++ + +++DI++ LHFDSQQSF+REFKK+ G P++YR+R+YW+L + Sbjct: 61 RRKIARAAALLKTSTLNLIDISIRLHFDSQQSFTREFKKILGVPPQKYRNRNYWNLPYLC 120 Query: 127 PSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTD 186 P ++ + I+F + D+ N S R+ + + +K D Sbjct: 121 PPYIWG-------KAISFTFLELSEMVLTTDVIPGNYSCFS----RKETIMSYIDKYKAD 169 Query: 187 IYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLY 229 +Y +S + K DL + + T K+ T GLY Sbjct: 170 VYCISGYGLQQKIGDLDYRDNYIATTKNDKAHCKKLTIPSGLY 212 >UniRef50_C6C946 Transcriptional regulator, AraC family n=3 Tax=Dickeya RepID=C6C946_DICDC Length = 313 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 3/205 (1%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + + L+ WIE +LE P+ I D+ KSGYS+ ++Q +F+ + LG YIR RRL +AA+ Sbjct: 10 RFIADLVGWIESHLESPLMISDVTAKSGYSKWHLQRMFKKETGISLGTYIRNRRLSQAAV 69 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQ 135 ++LT++++ ++AL FDSQQSF+R FKK FG SP YR + WD +++ PS + Sbjct: 70 ELKLTSQTIQEVALRYCFDSQQSFTRTFKKHFGTSPGHYRKQSSWDFSSLQPSLRLNVNA 129 Query: 136 KTECRLINFPETPIFGNSFKYDI---EVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVST 192 ++ P P F+Y ++ + + IY ST Sbjct: 130 VPVPEVVALPRLPANRCHFEYTQVVDDLVQVNDIARRPVLWEKACGRSHAADVSIYVSST 189 Query: 193 FEPSTKSVDLLTVETFAGTVCEYAD 217 P + + V +A+ Sbjct: 190 VYPDDNRIKRQVRVNYDVGVITHAE 214 >UniRef50_B4EVW5 AraC-family transcriptional regulator n=3 Tax=Proteus RepID=B4EVW5_PROMH Length = 304 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 11/217 (5%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 +++++LL WIE NLE P+ ++D+A KSGY++ ++Q +F+ + L YIR RRL +AA Sbjct: 20 EVIKELLLWIEVNLEKPLLLDDVAIKSGYTKWHLQRVFKQATGLTLASYIRGRRLTKAAT 79 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQ 135 +RLT +L IAL FDSQQSF+R FK +FG +P EYR D N P Sbjct: 80 ELRLTKLPVLTIALRYQFDSQQSFTRRFKAVFGVTPSEYRKVDVLCSDNFQPPINFEVTD 139 Query: 136 KTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM----KNFKTDIYFVS 191 +I PE+ ++ ++Y + + E +R + KNF +S Sbjct: 140 LPIPNIIELPESFLYVIQYQYFCSIEDIGKLHED-IRHQFWNDFLLYTDKNFTESSVLIS 198 Query: 192 TFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGL 228 ++P+T D + ++ G D +T RG Sbjct: 199 -YQPNTLRKDKIQIDYEIGL--NNLDH---FTRPRGF 229 >UniRef50_A8G9B3 Transcriptional regulator, AraC family n=1 Tax=Serratia proteamaculans 568 RepID=A8G9B3_SERP5 Length = 292 Score = 169 bits (428), Expect = 8e-41, Method: Composition-based stats. Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 4/209 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M +Q+++ LL WIE NL+ P++++DIA KSGYS+ ++Q LF+ LG Y R+RRL Sbjct: 1 MYQQQVITALLAWIEQNLDQPLTLDDIAAKSGYSKWHLQRLFKELTGEILGTYARRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 AA +RLT + IA FDSQQ+F+R FKK FG P YR W + P + Sbjct: 61 AAARELRLTNHGVAFIADKYQFDSQQTFTRCFKKQFGMPPAGYRRSTDWSGLGMQPPLRL 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKT---DIY 188 + +I P + G++ + + +LR+H + M +Y Sbjct: 121 MDAPLPQAEIITLPAMQLIGHTQHRSCTLGQLLHSKN-ELRQHAWRQMMPKEAETLAVVY 179 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVCEYAD 217 +++ E ++ + E A+ Sbjct: 180 GLTSLEADSRLRGRQRMAYTLALADERAE 208 >UniRef50_C8N9B6 AraC family transcriptional regulator n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9B6_9GAMM Length = 263 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 47/197 (23%), Positives = 82/197 (41%), Gaps = 4/197 (2%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 ++ + L ++E + I ++ IA +G S + L+R+ M L ++ RL RA Sbjct: 6 YEQRFLRALHYLENHYTDSIDLQRIADAAGLSPWHWHRLYRDVMGETLHTTVKWMRLHRA 65 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQ 133 A L+ T K DIA +++ QSF+R F+ +G SP++YR R +P L + Sbjct: 66 AWLISYTDKPFADIARECGYNNAQSFARSFRDAYGLSPQQYRERP----PPRYPVHLETR 121 Query: 134 QQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTF 193 T L + E G++F + E + R + + D + ++ Sbjct: 122 APVTVAMLAHSGECQRLGDTFYQLESLLRLRGAETSQARAFSIHPAIDPLHADKHVAASV 181 Query: 194 EPSTKSVDLLTVETFAG 210 P L E G Sbjct: 182 APEYAMAPLQAGEIAGG 198 >UniRef50_B3IA10 LdaA n=1 Tax=Escherichia coli E22 RepID=B3IA10_ECOLX Length = 327 Score = 166 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 21/236 (8%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEH-PISIEDIAQKSGYSRRNIQLLFRNFMHV 59 + Y+ + M++ + + ++I+ NL+ I+I+D+ SGYSRR +QLLF+ + + Sbjct: 29 LSYNSYMLGGFMLKLMTVNAITQYIDDNLDKTSINIDDLVAYSGYSRRYLQLLFKRHIGM 88 Query: 60 PLGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 +G YI+ RR+ RAA+ +RLT S+ +I+ L +DS Q+FSREFKK G +P +YR + Sbjct: 89 AVGRYIQLRRVSRAAVFLRLTDLSLSEISERLLYDSPQTFSREFKKNTGYTPLQYRSSNV 148 Query: 120 WDLANI---------FPSFLIRQQQKTECRLINF----PETPIFG-NSFKYDIEVSNKSP 165 W N+ FP+ + Q QK + +F E P +G NS +++ Sbjct: 149 WSFMNLTGFRDTNTTFPAPKLYQLQKRDIYAEHFICCQEEIPYYGLNSLSRIERITSALR 208 Query: 166 DEEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVET------FAGTVCEY 215 D K+ +L K +I+ + E ++ + F GT+ Y Sbjct: 209 DGNKKIFLSNLVEKNVGHKINIHTMLWLEKGNSETKIVINKGIYASWKFVGTIQNY 264 >UniRef50_Q9K766 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9K766_BACHD Length = 297 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 46/169 (27%), Positives = 86/169 (50%), Gaps = 9/169 (5%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +Q+ L++IE NL+ +++E +A+ + +S + +F+ + + +YIRKRRL AA + Sbjct: 7 IQRTLDYIEENLQEQMTLEQLAKIACFSPFHYHRVFQAIVGESVMDYIRKRRLTCAAERL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQ---- 133 T + ++ IA+ + F Q+SF+R FKK++G SPR+YR+ + L ++ Sbjct: 67 FYTDEKVITIAIEVGFQYQESFNRAFKKIYGVSPRQYRNAKRISGPLRGKACLDKKLWLG 126 Query: 134 QQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKN 182 K E + + P I G Y+++ N + +KN Sbjct: 127 GHKMEPKFVTKPAFHIIG----YELKTKNADGQNNKDIP-EFWQHYLKN 170 >UniRef50_A8GJ26 Transcriptional regulator, AraC family n=2 Tax=Serratia RepID=A8GJ26_SERP5 Length = 288 Score = 161 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 68/248 (27%), Positives = 116/248 (46%), Gaps = 26/248 (10%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 ++ +++LL WIE NL +P+S++ ++ KSGYS+ +Q +F+ + L YIR RRL A Sbjct: 4 QENHIRELLVWIEDNLTNPLSLDIVSAKSGYSKWYLQRMFKTQTGLSLASYIRARRLYLA 63 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQ 133 A +R T K++LDI++ FD+QQ+FSR FKK F SP YRH D +++ S Sbjct: 64 AFALRFTQKTILDISIEYQFDNQQTFSRCFKKHFAESPSVYRHARKQDFSHLVRSLSANH 123 Query: 134 QQKTECR--LINFPETPIFGNSFKYDIEVSNKSPDE---EVKLRRHHLARCMKNFKTDIY 188 + + + I G S+ Y +++++ K+R + + Y Sbjct: 124 PGDIQVDRIKVAKGQYAIKGKSYAYHLDIADLDKSHLHIRSKIREQFYQS-VASRPALTY 182 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVCE---------------YADMPKEWTT--TRGLYDP 231 ++ F P + + VE G + + D + + L+D Sbjct: 183 ALTQFIPD---GEQVRVEYALGVAEDCPTSDVAGLEPWPEIHGDYCRFCYSGKPVALHDH 239 Query: 232 THVIWTQA 239 I+TQA Sbjct: 240 VVQIYTQA 247 >UniRef50_Q9K6U1 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9K6U1_BACHD Length = 300 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 94/215 (43%), Gaps = 10/215 (4%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +Q+ +++IE +L PIS+E +A + YS + LF+ + + EYI++RRL Sbjct: 1 MSYIQSVQRAIDYIETHLHEPISLEKVAAHASYSYFHFHRLFKATVGCTMSEYIKRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 +AA + T S++DIA ++SQ++F+R FK+ F P +YR + I P + + Sbjct: 61 KAAYALLETKASIIDIAFEYGYESQEAFTRAFKQWFNVLPGKYRQ-ARPPVQLIDPYWAV 119 Query: 132 RQQQKT-----ECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLR----RHHLARCMKN 182 + + ++ + G + ++ ++ H L + Sbjct: 120 KTFPVNATGDHKPYIVTRQPLQVVGLQLEGLSLPGGSDREQTTQVAIPSLWHQLEARIHE 179 Query: 183 FKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYAD 217 + + ++ S+ S D A E D Sbjct: 180 IERRVDPFVSYGISSPSRDGSHFTYMACVEIEAGD 214 >UniRef50_D0YAG4 Transcriptional regulator, AraC family n=6 Tax=Klebsiella RepID=D0YAG4_KLEVA Length = 299 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 74/223 (33%), Positives = 113/223 (50%), Gaps = 6/223 (2%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 ++Q + ++L W+E N+ SI+D+AQ GYSRR + +F + +P+G+YIR RRL Sbjct: 1 MKQMLYLKMLAWLEDNIYCNPSIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTI 60 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIR 132 AA+ +RLT + + IA L +DS Q+FSREFKK F SPREYR +WD A + F Sbjct: 61 AAVSLRLTRQPIAAIAWQLSYDSPQTFSREFKKRFSLSPREYRCAVHWDTALLLKKFDPE 120 Query: 133 QQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLR-RHHLARCMKNFKTDIYFVS 191 + + R + PE G+ KY++ +S+ K R + R + +S Sbjct: 121 GESLPQARFCSLPERVYRGSPMKYELRLSDMVLQSTSKTAVRQKVDRFFTAGGGRLSVLS 180 Query: 192 TFEPSTKSVDLLTVETFAGTVCEYADMP-----KEWTTTRGLY 229 + + + + V F G E +P TT GLY Sbjct: 181 DYYAARNNELNVEVNAFVGCHRERGALPALTTNSTLTTRPGLY 223 >UniRef50_B8FN17 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FN17_DESAA Length = 290 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 96/212 (45%), Gaps = 20/212 (9%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 +++ ++ + ++ +I+ +L+ P+++E++A+ + +S + +F PL EYIR Sbjct: 1 MSDARAYYEERIIRVQMFIQDHLDDPMTLEELAKVACFSPFHFHRIFTAMTGEPLKEYIR 60 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY------RHRDYW 120 + L RAA +R +++ ++ +AL+ + + ++F+R F+ +FG PR+Y R R+ Sbjct: 61 RLLLERAAHELRYSSQPVVQVALNAGYQTHEAFTRAFRNMFGVPPRQYRTELPSRARNKA 120 Query: 121 DLANIFPSFLIR-QQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARC 179 +F +++ + + R+ FP + P EE + L Sbjct: 121 GSPQVFNLRILKPKGDAMDIRIEEFPPLDVVFIRH--------TGPYEECGIAWEKLCSH 172 Query: 180 MKNFK-----TDIYFVSTFEPSTKSVDLLTVE 206 K T + +P D + ++ Sbjct: 173 PDVAKELGPETQAIGICYDDPDITEADKIRMD 204 >UniRef50_A5G790 Transcriptional regulator, AraC family n=3 Tax=Bacteria RepID=A5G790_GEOUR Length = 294 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 35/137 (25%), Positives = 73/137 (53%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 Q+ L ++L I+ NL+ P++IE +A+ + S + +F + + Y+R+ RL RA Sbjct: 17 YQERLNRVLIHIQKNLDEPLTIERLAEVACLSPFHFHRIFSAHVGETVTGYVRRLRLERA 76 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQ 133 A + T +S+ D AL + +++ +F+R F++ FG SP E+R + + + + ++ Sbjct: 77 ATRIAFTGESVTDTALGVGYETPAAFTRAFRERFGMSPSEFRGQQRETILSFAENSTAKE 136 Query: 134 QQKTECRLINFPETPIF 150 + + F +T + Sbjct: 137 IIVMKPEMREFSKTKVL 153 >UniRef50_B8H068 Transcriptional regulator, AraC family n=13 Tax=cellular organisms RepID=B8H068_CAUCN Length = 296 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 106/218 (48%), Gaps = 13/218 (5%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 MR ++++ N R ++++L+ I+ +L+ +S+E +A + +SR + Q F + Sbjct: 1 MRMNQDVANNYHAR---MRRVLDHIDAHLDEDLSVEVLAAVAAFSRHHFQRQFSGLYGIG 57 Query: 61 LGEYIRKRRLCRAAILVRLTAKS-MLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 + Y++ R+ RA+ + + +L IAL ++ ++FSR F++LF SP +R Sbjct: 58 VAAYVQLARMKRASYRLAFRDQDGVLGIALDSGYEGPEAFSRAFRRLFDQSPSSFRRAPR 117 Query: 120 WDLANIFPSFLIRQQQKT------ECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRR 173 W+ + S L++ +++T + R+++FP+TP+ + D + + + RR Sbjct: 118 WEPWHAAQSPLVQARRQTMTFTDDDVRIVDFPDTPVAVMRHEGDPALLGDTIRRFIAWRR 177 Query: 174 HHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGT 211 A + + + V +P + ++ A T Sbjct: 178 ---AAGLPPRVSATFNVFHDDPDDTPAEQYRLDLCAAT 212 >UniRef50_Q6WFA3 Putative transcription factor Roh n=1 Tax=Enterobacter cloacae RepID=Q6WFA3_ENTCL Length = 134 Score = 156 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 47/126 (37%), Positives = 82/126 (65%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 + +++ +++W+E +L + +E+IA+KSGYSR + Q +F++ + LGEY+R RRL Sbjct: 4 KTYADSVVKDIVQWVENSLTSTLLVEEIAEKSGYSRWHFQRIFKHATGIALGEYVRARRL 63 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFL 130 AA+ ++LT K++L+IAL F+SQQ+F+R FK F P YR + W+L+ + P L Sbjct: 64 TCAAVELKLTTKTVLEIALHYGFESQQTFTRSFKNKFHLPPGRYRKQIAWNLSALCPPLL 123 Query: 131 IRQQQK 136 + ++ Sbjct: 124 LEHEEN 129 >UniRef50_B1HRP5 Transcriptional regulator, AraC/XylS family n=3 Tax=Bacillaceae RepID=B1HRP5_LYSSC Length = 287 Score = 156 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 78/169 (46%), Gaps = 4/169 (2%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +Q+ + ++E +L I+IE IAQ+ S + Q F + + +Y+R+RRL Sbjct: 1 MSWIESIQKAINFMEDHLLENITIEQIAQEVNSSVFHFQRTFAILTDMSIADYLRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR--DYWDLANIFPSF 129 AA + T + ++D+A +++ ++F++ F+K +P E R R + Sbjct: 61 LAAQELMDTDQKIIDLAYKYGYETPEAFTKAFRKQHYVTPSEARKRQGPLKSYNRLVIQV 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLAR 178 ++ + + +++ + + G Y+ + + E+ L + Sbjct: 121 SLKGAEPMKYKIVEKDKFQVVGVKRTYNCQDGENT--REIPLFWQEINE 167 >UniRef50_B2K4J9 Transcriptional regulator, AraC family n=34 Tax=Enterobacteriaceae RepID=B2K4J9_YERPB Length = 297 Score = 156 bits (395), Expect = 6e-37, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 81/135 (60%) Query: 28 NLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTAKSMLDI 87 NLE +++D+A+ SGYS+ ++Q F++ + + L YIR R L RAA+ +R++ K ++ I Sbjct: 19 NLEKRPTLDDVAKISGYSKWHLQRKFKSIVGLQLASYIRGRVLTRAAVALRISRKPIITI 78 Query: 88 ALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKTECRLINFPET 147 + L FDSQQ+F+R FKK FG +P +R ++WD+ + P F + E + + P Sbjct: 79 SDELGFDSQQTFTRTFKKRFGVTPNSFRQMNHWDVQGMIPRFGFYENYTPEIKQVTLPGK 138 Query: 148 PIFGNSFKYDIEVSN 162 + G + + D E N Sbjct: 139 ELVGFTRRLDFEEYN 153 >UniRef50_C6J7H0 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7H0_9BACL Length = 301 Score = 156 bits (394), Expect = 6e-37, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 93/235 (39%), Gaps = 9/235 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +Q+ +++IE L +++ ++A+ YS + F F+ + YIRKRRL Sbjct: 1 MNQINTIQKSIDYIEERLGEGLTLAEVAKAMFYSEYHFHRTFLFFVGETMTSYIRKRRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 AA L+ + ++DIAL F S ++F+R F+K++G P E R R + L Sbjct: 61 LAAELLAHSDLKIVDIALRCGFGSHEAFTRAFRKMYGILPTECRRRGRPPYLVPRANPLR 120 Query: 132 R---------QQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKN 182 + + R+ P I G + + E D +++ + Sbjct: 121 DFVAQITYDWGEYVMQYRIEQIPAKRILGFAIQTTTEDGQNHKDIPAFWQKYMHEQWGSR 180 Query: 183 FKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWT 237 ++ T + T G + +E T + T+ I+T Sbjct: 181 VPGKLHPNVELGVCTALDEDGTFRYIIGFEVDETTEVQEGLTEYRVPAQTYAIFT 235 >UniRef50_B8K3P3 Transcriptional activator n=2 Tax=Vibrio RepID=B8K3P3_VIBPA Length = 306 Score = 156 bits (394), Expect = 8e-37, Method: Composition-based stats. Identities = 44/148 (29%), Positives = 78/148 (52%), Gaps = 10/148 (6%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + ++L +I +L+ P+S+++IA +S +SR +Q +F+ + + Y+R+ +L AA Sbjct: 12 NRISKVLGFIHRHLDTPLSLDEIAAQSCWSRWQLQRVFQAETGLTVANYVRQLKLSLAAE 71 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI---- 131 L+ T + ++DIAL+ F+S+ +FSR FK+ F CSPR YR + I Sbjct: 72 LLLDTDQRVIDIALATGFNSEIAFSRAFKQFFACSPRVYRKAGQR--TGLKKPIEISEVQ 129 Query: 132 ----RQQQKTECRLINFPETPIFGNSFK 155 R+Q E R+ P + G + Sbjct: 130 INGEREQSFVEVRVETKPAFILKGMRGE 157 >UniRef50_Q31GA4 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=Q31GA4_THICR Length = 288 Score = 155 bits (393), Expect = 9e-37, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 87/217 (40%), Gaps = 7/217 (3%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + ++ ++I +L +S+E +++ + +S+ + F + + +G+++ +RL +A+ Sbjct: 11 NRMNRVCDYILAHLNDDLSVEKLSEVACFSKFHFHRQFSTYTGMTVGKFVLMQRLKQASK 70 Query: 76 LVRLTA-KSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSF-LIRQ 133 + ++DIAL HF+S ++FSR FK FG +P ++R W + +I + Sbjct: 71 QLAFNQPMRVIDIALEAHFESPEAFSRAFKNTFGQTPSQFRQSPNWHTWRAQYALPIIER 130 Query: 134 QQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTF 193 L+ F T I + E S + K R+ + + Sbjct: 131 NIVMNIDLVEFDHTLIAVLEHRGPAEKIEDSLNIFRKWRK--TTPYSPVANHKSFGLVYD 188 Query: 194 EPSTKSVDLLTVET---FAGTVCEYADMPKEWTTTRG 227 +P T + T+ + A G Sbjct: 189 DPDTVEPAKFRFDLCAEVKETIPDNAQGLINKAIPAG 225 >UniRef50_C3LC07 Transcriptional regulator, AraC family n=7 Tax=Bacillus RepID=C3LC07_BACAC Length = 296 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 100/236 (42%), Gaps = 13/236 (5%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 + +Q+ +++IE ++ ++ ++A+ +G+S + +F+ + + EY+RKRRL RA Sbjct: 4 YETQIQRSIDYIEEDVMEKQTLRNLARIAGFSESHFHRVFQALVGDTVMEYVRKRRLARA 63 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQ 133 A + T + ++DIA F S ++F+R FKKLF +P EYR ++ ++ S ++Q Sbjct: 64 AYQLSHTDEKIIDIAFEHGFQSHETFTRAFKKLFQMTPSEYRKQEIE--TPMYYSVNVKQ 121 Query: 134 QQ--------KTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKT 185 ++ + E R++N PE + G K + D + + Sbjct: 122 RKLNPYLGGIQMEYRIVNKPEFLMAGYELKTTSKEGKNHQDIPAFWQEYLQKDLGTTIPN 181 Query: 186 DIYFVSTFEPSTKSV---DLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWTQ 238 E + + G + R T+ ++T+ Sbjct: 182 RKDTSQWVELGLCTDFNLETGDFTYIIGMEVTDFENVPNEIAKRTFPAATYAVFTR 237 >UniRef50_D1UAH3 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UAH3_9DELT Length = 285 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 7/214 (3%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 MR KE T+ + + + ++LE I+ +L+ P+ + D+A + +S + +F + Sbjct: 1 MRTTKEETKKD--HAERMDRVLEHIQAHLDDPMQLLDLADIACFSPYHFHRIFSGMIGES 58 Query: 61 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 + +IR+ RL RAAI ++L + DIA F++ +SF+R F +FG SP+ +R + Sbjct: 59 VKSHIRRLRLERAAITLKLGEAPVTDIAFQAGFETHESFTRAFNAMFGLSPQRFRQAHHG 118 Query: 121 DLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM 180 L + ++ E ++N E + + N + R + Sbjct: 119 TLDH--KHCNYWKEIVMEASVVNLEEMNVVFVRHTGPYKDCNHAWSTLCGWAG---PRGL 173 Query: 181 KNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCE 214 N I + +P D + + + Sbjct: 174 VNADARILALCHDDPDVTPEDKIRYDACITVAGQ 207 >UniRef50_C6IVK7 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVK7_9BACL Length = 304 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 54/242 (22%), Positives = 98/242 (40%), Gaps = 31/242 (12%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 Q+ + Q+ ++I+ +L H ++++ +A+ S +S+ + +F + YI K+RL RA Sbjct: 4 YQERVDQVCKYIDAHLHHKLNLDQLAELSHFSKYHFSRIFASVTGETPFAYITKQRLARA 63 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWD------------ 121 A +R T +S+L+IAL F+S SF+ FKK FG +P E R + D Sbjct: 64 AAYLRETNQSVLEIALGCGFESASSFNAAFKKHFGRTPTEMREQARQDRNISQADRNRQE 123 Query: 122 -------LANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRH 174 + L+R+ + + ++ P Y V + + + Sbjct: 124 AGAAPNPYHQTVKNNLLRRVWQMQATIVELPL-----MEAAYVRHVGSYLETYQAWAKLG 178 Query: 175 HLARCMKNFKTD--IYFVSTFEPSTKSVDLLTVETFAGT--VCEYADMPKEW---TTTRG 227 A + F + +S +P+ + + AD P E T G Sbjct: 179 MWAAQHQLFPPEQSFIGISLDDPAVTEEEECRYDACVTVPDTLSRADAPPEIGFQTLPGG 238 Query: 228 LY 229 LY Sbjct: 239 LY 240 >UniRef50_B2HTR6 DNA gyrase inhibitor n=6 Tax=Proteobacteria RepID=B2HTR6_ACIBC Length = 283 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 94/222 (42%), Gaps = 7/222 (3%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 + + LQ + ++I+ +L+ + ++ ++Q + S+ + +F + + + ++I+ RL R Sbjct: 3 VYTQKLQLVCDYIQRHLDEDLDVDRLSQIAALSKFHFHRIFAIHVGLNVMKFIQLSRLKR 62 Query: 73 AAILVR-LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 A+ + +++IAL FDS ++F+R FK+ F +PR +R + W+ + F I Sbjct: 63 ASFQLAFEPDLKIIEIALQAGFDSPEAFTRAFKRSFDQTPRAFRDKPDWESWHQKFVFTI 122 Query: 132 -RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFV 190 + + K ++ P I S + ++ + + R+ K+ Y + Sbjct: 123 PKSELKMNVNIVERPAEKIAYLSHLGSPDKVLETAAQFIAWRKE--TGLSPVTKSKTYGI 180 Query: 191 STFEPSTKSVDLLTVETFAGTV---CEYADMPKEWTTTRGLY 229 +P D + E + + G Y Sbjct: 181 PFADPDQTPADEFRFDIAGSIEKAVPENSYGVQTGEIPAGRY 222 >UniRef50_C9NSU9 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NSU9_9VIBR Length = 310 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 53/205 (25%), Positives = 101/205 (49%), Gaps = 11/205 (5%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 + ++L +I ++ P+S++DIA++S +SR +Q +F+ + + Y+R+ +L +AA Sbjct: 16 RISKVLSFIHQHISEPLSLDDIARQSCWSRWQLQRVFQTETGMAVATYVRELKLSQAAER 75 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQK 136 + T+ ++DIAL L F S+ SFSR FK++FG SPR YR + + + Q+ Sbjct: 76 LIDTSDRVIDIALELGFSSEISFSRSFKQVFGLSPRAYRKQGLR--TGLRKPIQVSQRTA 133 Query: 137 -------TECRLINFPETPIFGNSFKYD-IEVSNKSPDEEVKLRRHHLARCMKNFKTDIY 188 E R+ + E + G + + + N ++V H L + + + Sbjct: 134 EEACPLFVEVRVESKNEFFLKGLHGEINGLFALNPDFQQKVPALWHRLEQTLPDEPERPV 193 Query: 189 FVSTFEPSTKSV-DLLTVETFAGTV 212 ++ T+S D +E +AG Sbjct: 194 ALTGVIDITQSHFDGSNMEYWAGVE 218 >UniRef50_Q5WGK8 AraC/XylS family transcriptional regulator n=2 Tax=Bacillus RepID=Q5WGK8_BACSK Length = 280 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 84/210 (40%), Gaps = 3/210 (1%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + +E+IE +L++ + +++IA + SR + Q +FR + EYIR RR+ AA + Sbjct: 1 MLDSIEYIENHLDNELLLDEIAAVACMSRFHFQRMFRMLTGYAVSEYIRNRRITVAAQEL 60 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH--RDYWDLANIFPSFLIRQQQ 135 + ++D+A+ ++S +SF++ F+++ G SP + + + I ++ Sbjct: 61 VHSKSKVIDVAMKYGYESPESFTKAFRRIHGISPSDAKKHSQSLKAYPKISFQIQLKGDV 120 Query: 136 KTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEP 195 + + +++ + G S + + + K + + Sbjct: 121 EMDYKIVEKDAFTVVGKSIRTTTIGGENNRKIAAFWNESNRNGLSKQLAKNCGPLGLLGI 180 Query: 196 STKSVDLLTVETF-AGTVCEYADMPKEWTT 224 T+ +P +W T Sbjct: 181 CIDFDKQQENLTYLIAAEKNSDQIPVDWET 210 >UniRef50_C1I964 Transcription activator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I964_9CLOT Length = 286 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 89/217 (41%), Gaps = 7/217 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +Q+ ++++E ++ I+ ED+A+ S + LF + EYIRKRRL Sbjct: 1 MNYIQSIQKSIDYMENHILEDINYEDVARHVYMSNYHFHRLFSMITGITANEYIRKRRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR--DYWDLANIFPSF 129 A + ++ +LDI+L +DS +SFS+ F + G +P R ++ Sbjct: 61 MAGQEISMSDAKVLDISLKYGYDSPESFSKAFMRFHGVTPNIARRSGMKLKSFNSLVIKI 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARC--MKNFKTDI 187 + + +++ + ++ +E ++ +E++ + A K++ Sbjct: 121 SLEGGTVMDYKIVKKESFKLLVKVKEFRVESISEDNNEDIPNFWNECAENGVFDVLKSNT 180 Query: 188 --YFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEW 222 + + + + + D+P+ + Sbjct: 181 TNHDIYGVCKPISK-ESKYFDYGIAMKYDGGDVPEGY 216 >UniRef50_UPI0001C36EC6 transcriptional regulator, AraC family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36EC6 Length = 292 Score = 153 bits (387), Expect = 4e-36, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 83/210 (39%), Gaps = 8/210 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +Q + +IE N+ + IA ++ S Q +F + LGEYIR RRL Sbjct: 1 MNWAEGIQNAINYIENNITEELDNNSIAAQACCSSYYFQKIFSLLCDMTLGEYIRNRRLA 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR--DYWDLANIFPSF 129 A + T ++DIA+ + + +SF+R F G SP E R + + Sbjct: 61 LAGSELISTDIKVIDIAMKYGYSTPESFTRAFTLFHGVSPSEARKNASSLRSFSRLTVEL 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSN----KSPDEEVKLRRHHLARCMKNFKT 185 ++ + R+I P + + + ++ ++ PD K + + Sbjct: 121 SLKGGKTMNYRIIEKPAFTVIEKAEVHRLDENDVVSSTVPDVWAKAGADGTIAQLVGMAS 180 Query: 186 DIYFVST--FEPSTKSVDLLTVETFAGTVC 213 D F+ + ++ D T E +C Sbjct: 181 DREFIYGICYGNGKETYDEDTFEYSIAAIC 210 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 153 bits (387), Expect = 4e-36, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 4/118 (3%) Query: 4 DKELTENEMIRQK----ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHV 59 D+ + E+ RQ+ L + ++I+ + P+++E++A+++G S LF+ + Sbjct: 392 DRIAADLEVWRQQQAYGKLGKAKDYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGI 451 Query: 60 PLGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 +Y+ R+ RA + T +S+ +I S+ ++ FSR FKK G SP EYR + Sbjct: 452 TFIDYVTNVRIERAKEALAETDQSLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKK 509 >UniRef50_B7JL95 Transcriptional regulator, AraC family n=54 Tax=Bacillus cereus group RepID=B7JL95_BACC0 Length = 299 Score = 153 bits (387), Expect = 5e-36, Method: Composition-based stats. Identities = 33/103 (32%), Positives = 67/103 (65%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 ++++++ +E+IE +L ++ E +A S S + +F+ ++ + + +YIRKRRL A Sbjct: 5 YKEMIKKAIEYIENHLHEELTTERVASHSAVSMYHFHRIFQRYIGMSVTDYIRKRRLTHA 64 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 A ++ T ++++DIA+ F SQ++F+R FK++F P++YR Sbjct: 65 AQVLVSTERAVIDIAMQYGFSSQEAFTRAFKRMFQLPPKKYRK 107 >UniRef50_A6D8X3 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D8X3_9VIBR Length = 295 Score = 153 bits (387), Expect = 5e-36, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 84/149 (56%), Gaps = 4/149 (2%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 +++ + I +++++++I NL+ P+++ ++A S +SR +Q +F+ + L +Y+R Sbjct: 2 VSKRKPIHLNRVEKIVDYIHQNLDKPLTVTELADISCWSRWQLQRVFQEQTNHNLAQYVR 61 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR----HRDYWDL 122 +++L RAA + + + + DIAL F+S+ SFSR FK+LF SPR+YR Sbjct: 62 EQKLSRAAEQLLKSDQKVTDIALDFGFNSEVSFSRAFKQLFAISPRQYRLVGKLNGIRLP 121 Query: 123 ANIFPSFLIRQQQKTECRLINFPETPIFG 151 + P + Q R+ + PET +G Sbjct: 122 LVMSPELPLAQAATQVVRIESKPETQFWG 150 >UniRef50_A7FVD8 Transcriptional regulator, AraC family n=4 Tax=Clostridium RepID=A7FVD8_CLOB1 Length = 294 Score = 153 bits (386), Expect = 6e-36, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 98/244 (40%), Gaps = 32/244 (13%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M +L LE+IE NL I+I+DI++ + SR + Q +F + + +YI+ RRL Sbjct: 1 METIMLLNNTLEYIERNLHTAINIDDISKVACSSRYHFQRVFHSLTGFTVTQYIKNRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 AA + T + ++DIAL ++S ++F++ FK+L G SP + + FP Sbjct: 61 LAAEELVSTDRRIIDIALKYGYESPEAFTKAFKRLHGISPSALKKLN--GKIKAFPKISF 118 Query: 132 RQQQKTEC----RLINFPETPIFGNSFKY---DIEVSNKSPDEEVKLRRHHLAR------ 178 + K EC R++ +FG F+ + + P+ K+ + Sbjct: 119 QISIKGECEIIYRIVEKEAFKVFGTGFETTRINYAAYKEIPEFINKIFKDGTHDRINEAL 178 Query: 179 ------CMKNFKTDI-------YFVSTFEPSTKSVDLLTV----ETFAGTVCEYADMPKE 221 + F D Y + P T+ D T+ + Y MP Sbjct: 179 GNSKGSLLDGFHYDFKENGTRKYMMGYEIPRTEISDEFTILQVPKLTWAVFEGYGAMPDN 238 Query: 222 WTTT 225 Sbjct: 239 LIIQ 242 >UniRef50_C5BEG3 Transposon tn10 tetd protein (Orfr) n=2 Tax=Edwardsiella RepID=C5BEG3_EDWI9 Length = 122 Score = 153 bits (386), Expect = 6e-36, Method: Composition-based stats. Identities = 47/111 (42%), Positives = 71/111 (63%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 + Q ++ L++WIE NL+ I I+DIA+++GYS+ +Q LF+ L Y+RKRRL Sbjct: 4 QGQHQLLVDALIQWIEQNLDKRILIDDIAERAGYSKWYLQRLFKEVTGYSLAAYVRKRRL 63 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWD 121 RAA ++ + K +++I L FDSQQ+FSR FK+ +G SP YR + D Sbjct: 64 IRAAAELQRSNKKIMEIMLQYGFDSQQTFSRAFKRRYGTSPGSYRQQADGD 114 >UniRef50_B7GST4 Transcription activator, effector binding n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GST4_BIFLI Length = 286 Score = 152 bits (385), Expect = 9e-36, Method: Composition-based stats. Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 7/225 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M R L++ + +IE +L I + ++++++GYS + LF + + +G YI +RRL Sbjct: 1 MKRYPPLERAITYIEAHLNEYIGLNEVSRETGYSYYYMTRLFSSVLGESVGHYINRRRLY 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 A+ + + + ++DIAL ++S ++FSR FK +FG SP YR + Sbjct: 61 NASEKLIHSDQKVIDIALDCGYESSEAFSRAFKAVFGYSPVAYRKAGLDLVIKAKKELAP 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTD----I 187 + + P+ + G + + + D ++ K+F T Sbjct: 121 EDVCHIANHISHAPKIILLGETEVAGLRGTTSLSDNQLPGLWEQFHGLNKDFFTTSAGYG 180 Query: 188 YFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEW---TTTRGLY 229 + TK D L G V ++ +P E T G Y Sbjct: 181 ICETQKTAYTKDGDALYSVMIGGPVKDFDCLPLELAKKTLRAGRY 225 >UniRef50_A7GBT6 Transcriptional regulator, AraC family n=13 Tax=Clostridium RepID=A7GBT6_CLOBL Length = 289 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 14/237 (5%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M K L++ + +IE NL + ED+A+ GYS + LF + +G YIRKR++ Sbjct: 1 MDYIKSLEKAIMYIEENLNQDLKTEDVAKSIGYSYYHFTRLFEGLLGETIGNYIRKRKIT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH---------RDYWDL 122 + A + T K ++DIAL F S ++F+R FKK++ SP EYR + Y D Sbjct: 61 KTAQDLIYTDKRIIDIALDFQFKSPEAFARAFKKIYDISPTEYRKNRIDVLKGNKKYIDN 120 Query: 123 ANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKN 182 + L + ++I PE + G K ++ +N PD ++ K Sbjct: 121 ERL-KHILNNITIQPVIKVI--PEVKVIGIKGKTSLK-NNLLPDLWSAFNKNSSKIVNKA 176 Query: 183 FKTDIYFV-STFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWTQ 238 Y + P+ + + + G D E + + +V++T Sbjct: 177 EPLKYYGICENDRPTNQFGENVAYSEIVGIEVTSFDYIPEGMVAKVIPQGKYVVFTH 233 >UniRef50_UPI0001789679 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789679 Length = 289 Score = 151 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 6/158 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M +I++Q L IE NLE P+S+ +A S+ LF M L +YI RRL Sbjct: 1 MNHHRIIEQALIHIEENLEQPLSVSSVALTFNMSKYYFHRLFSAMMGCSLNQYILSRRLN 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 A L+ S+ DIA L F +Q SF+R FK+ +G +P R P+ + Sbjct: 61 AALSLIHNNNLSLTDIAYQLAFGTQASFTRAFKQHYGVAPSSLRAGFNKISPTPIPTVVK 120 Query: 132 RQQQKT------ECRLINFPETPIFGNSFKYDIEVSNK 163 R + + L F ET I G +F+ D+ + Sbjct: 121 RPFKNMNGDVVTDFTLTEFKETRISGIAFEVDLATDDY 158 >UniRef50_C1DQ04 Transcriptional regulator, AraC family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DQ04_AZOVD Length = 325 Score = 151 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 82/211 (38%), Gaps = 10/211 (4%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 ++ + + + IE E P +E IA + S Q F+ M GEY+R+ RL Sbjct: 47 RLLEDTRIVKAIRLIESTTEEPFPLERIAAHANLSASRFQRRFQEAMGESPGEYLRRTRL 106 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFL 130 RAAI + ++ +S+L IALS + S ++F R F + FG P +YR + P Sbjct: 107 DRAAIFLIISQESVLSIALSTGYASHEAFIRAFHRQFGLVPTQYRQFARRASTPLAPE-- 164 Query: 131 IRQQQKTECRLINFPETPIFGNSF--KYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIY 188 + + + R+ +FP P+ F Y + N E R Sbjct: 165 -DEPRVAQVRVESFPSQPVLAMRFYGSYALVEDNWRRFAECLDRAGF-----PLADAQAV 218 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVCEYADMP 219 + P DL+ + + P Sbjct: 219 GIVQDNPEITPNDLVRYDCAIVDAGFDREHP 249 >UniRef50_B8FSY0 Transcriptional regulator, AraC family n=6 Tax=Clostridiales RepID=B8FSY0_DESHD Length = 291 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 6/159 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M +K L+ + +IE +L I +ED+A+ +GYS ++ F + +G YI+KRRL Sbjct: 1 MDYRKALEHAVMYIENHLGSDIKVEDVAKAAGYSYYHLNRQFTAILGESIGSYIKKRRLA 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFL- 130 AA + T + ++DIA+ F+S ++FSR FK ++ SP+ YR Sbjct: 61 DAAKKILYTNRKIIDIAMENGFESPEAFSRAFKAIYKVSPQTYRQNRLDTFIAGKERLDS 120 Query: 131 -----IRQQQKTECRLINFPETPIFGNSFKYDIEVSNKS 164 + + +++ PE + G + + + Sbjct: 121 GLLDHLARNVTVHPKIVELPEIKVAGLRGETTLRDNRLR 159 >UniRef50_B7HW35 Transcriptional regulator, AraC family n=34 Tax=Firmicutes RepID=B7HW35_BACC7 Length = 281 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 50/215 (23%), Positives = 91/215 (42%), Gaps = 19/215 (8%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + LE+IE +L+ I + IA+ + S + +F + V L EYIR+RRL Sbjct: 1 MDWLERMNNALEYIENSLDEDIDYKKIAKAASCSEFHFSRMFSSISGVSLSEYIRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 AA ++ ++D+A+ + S +FSR FKK+ G +P R++ FP Sbjct: 61 LAAFEIQKGDIRIIDVAIKYGYVSSDAFSRAFKKMHGITPSNARNKGVQ--LKAFPKISF 118 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF-- 189 + K + + E + +++ + KS + + N K D + Sbjct: 119 QISIKGDTEMEYRIE------NLDFELRIVGKSKSVKTSSAFKKIPTLWNNAKKDGFMQE 172 Query: 190 ---VSTFEPSTKSVDLLTVETFAGTVCEYADMPKE 221 +S +P K +E+ G + A + E Sbjct: 173 LIDMSWEDPKCK------LESLLGVCGKDAAITDE 201 >UniRef50_P0A9E4 Regulatory protein soxS n=98 Tax=Proteobacteria RepID=SOXS_ECO57 Length = 107 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 49/106 (46%), Positives = 76/106 (71%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M QKI+Q L+ WI+ +++ P++I+ +A+KSGYS+ +Q +FR H LG+YIR+RRL Sbjct: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 AA+ +R T + + DIA+ L + SQQ+FSR F++ F +P +YRHR Sbjct: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 >UniRef50_A6VR73 Helix-turn-helix-domain containing protein AraC type n=2 Tax=Marinomonas RepID=A6VR73_MARMS Length = 306 Score = 150 bits (380), Expect = 3e-35, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 23/225 (10%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 R ++++L++I NL+ I + +A+KS +SR Q +F + + +YIR+ RL +A Sbjct: 6 RLTRIEKVLDYIHENLDESIHVSSLAEKSCWSRWQFQRVFGQATGLSVAQYIRELRLSKA 65 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD-----YWDLANIFPS 128 A L+ + +DIA+ FDS+ SFSR FK++F C+PR+YR R L P+ Sbjct: 66 AELLLSSKNRHVDIAIQCGFDSEISFSRAFKQMFNCTPRDYRQRGKRYGLRTPLQYRCPN 125 Query: 129 FLIRQQQK--TECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTD 186 + K T+ R+ + I G S + + + SP+ ++ + + Sbjct: 126 KAQTETPKTFTQIRIESRDGFHIQGRS-AWIRGLFSASPNFSERVPQ--------LWSQV 176 Query: 187 IYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDP 231 I V T + + ++ ++A P + G +P Sbjct: 177 ISEVKTVTKGYRPIGIID-------TQDHAQHPDQMLYWAGYLEP 214 >UniRef50_A5V467 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V467_SPHWW Length = 296 Score = 150 bits (380), Expect = 3e-35, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 66/110 (60%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 ++ +LQ++ +++E ++ IS++ +A+++G SR + LF++ + + Y+ + Sbjct: 186 AARSVLSSPVLQRVKDYVEAHIAEDISLDMLAREAGVSRFHFIRLFKDSVGMTPHAYLIE 245 Query: 68 RRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 RR+ RA L+ T +S+ +IA++ F+ F+ F++L+ PRE+R R Sbjct: 246 RRMVRACNLLMHTKQSIGEIAVNCGFEDPSYFAARFRRLYRMCPREFRKR 295 >UniRef50_Q81BV9 Transcriptional regulator, AraC family n=72 Tax=Firmicutes RepID=Q81BV9_BACCR Length = 296 Score = 150 bits (380), Expect = 3e-35, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 94/236 (39%), Gaps = 8/236 (3%) Query: 6 ELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYI 65 E ++ + + ++ ++IE N+ +SIE++A +G+S+ + +F+ ++ L Y+ Sbjct: 2 ESKQSRNEYLRRIYKVQDYIESNINDSLSIEELADVAGFSKFHFHRIFKGIVNESLSRYV 61 Query: 66 RKRRLCRAAILVRL-TAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLAN 124 + +L RA L+ T ++ DIA F FSR FK +G SP +YR+ + + + Sbjct: 62 NRLKLERATHLLTYRTDMTITDIAYHFGFTDSAVFSRTFKNYYGVSPSQYRNDNSKNCKD 121 Query: 125 I--FPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKS-PDEEVKLRRHHLARCMK 181 + P + ++ + ++ + E + P KL + + Sbjct: 122 VRGIPQYNECKKVRGNVEIVTADNINVAYIRHIGTYEELTIAFPKMIEKLFHYAAKQNYH 181 Query: 182 NFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKE----WTTTRGLYDPTH 233 F+ + + D + T+ + + + G Y H Sbjct: 182 VFEDTKVLTIYHDHHEFTEDYHLRTSLCVTISDESTVETNDVGIMVIPSGKYAVGH 237 >UniRef50_A8RX40 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RX40_9CLOT Length = 140 Score = 150 bits (379), Expect = 4e-35, Method: Composition-based stats. Identities = 33/107 (30%), Positives = 64/107 (59%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 ++ +++++++IE +LE +++E IA+ +GYSR ++ +F + +Y+++RRL A Sbjct: 4 QKHTVRKVIDYIEEHLEEKLNLEQIAEHAGYSRFHLNRIFMEETGGTIHKYVQERRLTMA 63 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 A + T + IA + SQQ+FS FK+++ C P YR R + Sbjct: 64 AEKLVDTDMDITQIAYDAGYQSQQAFSLAFKQVYLCPPGAYRKRGIY 110 >UniRef50_Q88KW6 Transcriptional regulator, AraC family n=11 Tax=Proteobacteria RepID=Q88KW6_PSEPK Length = 289 Score = 150 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 85/192 (44%), Gaps = 4/192 (2%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 K + +L +I+ +LE +S+ +++ + +S + F +M VP+ Y++ RL RAA Sbjct: 12 KRFETVLAYIDSHLEGDLSVNALSRIANFSAFHFHRQFTAYMGVPVSRYVQLMRLRRAAH 71 Query: 76 LVRLT-AKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLAN-IFPSFLIRQ 133 + + A +L+ A F+S ++F+R FK+ FG +P + W + +F + Sbjct: 72 QLVASPAMPILEAAFGAGFESPEAFARAFKRAFGMAPSVFAKAPNWQAWSAVFNVPQRSR 131 Query: 134 QQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTF 193 + R++NF ET + + + ++S + R H + + + + Sbjct: 132 SITMQIRIVNFAETHVAALEHQGPPGLVSESVARFRQWRMH--SGQSPVASSRTFGIPYD 189 Query: 194 EPSTKSVDLLTV 205 P T Sbjct: 190 NPDTTPAHAFRF 201 >UniRef50_A8FAK8 Possible AraC family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FAK8_BACP2 Length = 295 Score = 150 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 65/107 (60%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 + +K +Q+ L +IE +L+ + ++ +A+ +GYSR + +F+ + + +Y+R+RR Sbjct: 2 SYQEHEKTIQETLNYIEQHLKDDLPLQTLAKHAGYSRFHFHRIFKKVIKKSVVDYLRERR 61 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 + +AA + T + +DIA F SQ+SF+R FKK++ SP YR Sbjct: 62 MTQAAKDLIHTDQRAIDIAFQYRFSSQESFTRAFKKIYDMSPARYRK 108 >UniRef50_C6CRA3 Transcriptional regulator, AraC family n=8 Tax=Bacillales RepID=C6CRA3_PAESJ Length = 297 Score = 149 bits (377), Expect = 6e-35, Method: Composition-based stats. Identities = 58/232 (25%), Positives = 94/232 (40%), Gaps = 16/232 (6%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 M +Q + +IE L+ +S+E IA ++G+S + Q LF + EYIRKRRL Sbjct: 10 RMEHYTRIQYAITFIEEQLQEALSLEAIAIRAGFSLYHFQRLFHAITGFTVQEYIRKRRL 69 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFP--- 127 RAA +R+T ++LDI++S + SQ++F+R F FG +P +YR + LA P Sbjct: 70 SRAAEELRVTRHTVLDISVSYQYGSQEAFTRAFAGYFGMAPAQYR-KHQPLLALRLPIDL 128 Query: 128 ----SFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHL--ARCMK 181 + + + +I P T I G + Y ++N+ EE+ H Sbjct: 129 VALTANIRGGLTMYKPDIIERPATRIIG--YNYPTNLNNERYFEEIPGFYAHFGNHEYFM 186 Query: 182 NFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKE----WTTTRGLY 229 + + G +E G Y Sbjct: 187 RIPNKARPAFAYGIPHGYGEDGAFSFLIGEEVTSFAEVEEGFACLELPSGKY 238 >UniRef50_B0N339 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N339_9FIRM Length = 211 Score = 149 bits (377), Expect = 6e-35, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 2/146 (1%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + L++IE +L+ I I D+A ++ S Q FR + EYIR RRL A V Sbjct: 7 ISNALKYIEEHLKEDIKIVDVANEAYVSSFYFQKAFRILCGFSVAEYIRYRRLSLAGSEV 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY--WDLANIFPSFLIRQQQ 135 T K +++IAL +DS SF++ F + G +P R A + F ++ Sbjct: 67 ITTNKKIIEIALEYGYDSPDSFTKAFTRFHGVTPTVARKEQLMIKSFAPLKIQFTLKGGS 126 Query: 136 KTECRLINFPETPIFGNSFKYDIEVS 161 + ++I + G + ++D + + Sbjct: 127 TMDYKIIEKEAFTVLGKARRFDFDCA 152 >UniRef50_C6CRY2 Transcriptional regulator, AraC family n=69 Tax=Bacillales RepID=C6CRY2_PAESJ Length = 301 Score = 149 bits (376), Expect = 8e-35, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 11/187 (5%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +QQ +++IE ++ +S+ +AQ + S + +F++ + EY+RKRRL +A V Sbjct: 9 IQQTIDYIEAHISEELSLSRLAQVAKLSDFHFHRVFQSMAGETVMEYVRKRRLAISAYQV 68 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQ---- 133 + ++DIAL F + ++F+R FK++F +P EYR R+ A + L R+ Sbjct: 69 ANSDAKLIDIALDTGFQNHETFTRAFKRMFEMTPAEYRKREIKPPAYSRLNVLQRKYNPY 128 Query: 134 --QQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHL--ARCMKNFKTDIYF 189 + E ++I P + G + N +E+ KN ++ Sbjct: 129 LGGIRMEYKIITKPAFKVIGYEIRTRANGDNH---KEIPAFWQEYIQKELYKNIPNRVHK 185 Query: 190 VSTFEPS 196 S E Sbjct: 186 ESPVELG 192 >UniRef50_C8QFY6 Transcriptional regulator, AraC family n=3 Tax=Enterobacteriaceae RepID=C8QFY6_9ENTR Length = 142 Score = 149 bits (376), Expect = 9e-35, Method: Composition-based stats. Identities = 46/105 (43%), Positives = 71/105 (67%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M++++I+ L WI+ NL+ +SI+++A KSGYS+ ++Q +FR LG YIR+RRL Sbjct: 1 MMQEEIIHSLTHWIDQNLDKTLSIDEVAAKSGYSKWHLQRMFRTVTKQTLGGYIRERRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 AA +R T + + DIA+ +DSQQ+FSR F++ F +P YRH Sbjct: 61 LAAEALRQTQRPVFDIAMQYGYDSQQTFSRVFRRQFSQTPTAYRH 105 >UniRef50_C5RP62 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RP62_CLOCL Length = 292 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 2/149 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M +Q + ++E N+ I+ + IAQ + S + Q +F +GEYIR RRL Sbjct: 1 MDWINSMQNAINYMEDNILEEINYDKIAQCAYSSTYHFQRMFSMLTGFTVGEYIRNRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR--DYWDLANIFPSF 129 AA + + + + DIA+ + + ++F++ F++ G +P R ++ Sbjct: 61 LAAQELSFSKERITDIAIKYGYGTSEAFTKAFQRFHGITPTAARESGVKLKSFNSLSIQV 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDI 158 ++ ++ ++I IFG FK +I Sbjct: 121 TLKGDKEMNYKIIEKEPFKIFGKDFKTNI 149 >UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32_CHLAA Length = 1202 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 34/102 (33%), Positives = 56/102 (54%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q ++++ + +I + HP++ +DIA G S + FR + EY+ + R+ +A Sbjct: 1094 QMLVRKAMAYIHSHYTHPLTRQDIAHYVGMSEDYLTHCFRQELGTTPVEYLNRYRVLQAR 1153 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 L+ + KS+ +IAL + F S FSR F+K G SP EYR Sbjct: 1154 HLLAESDKSITNIALEVGFSSSSYFSRVFRKEVGQSPEEYRR 1195 >UniRef50_B0C3V1 Transcriptional Regulator, AraC family n=5 Tax=Cyanobacteria RepID=B0C3V1_ACAM1 Length = 283 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 58/100 (58%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + LQQ+L++I+ +L+ I + D+AQ S + LF+ +Y+ ++R+ A Sbjct: 182 RQLQQVLDYIDAHLDCEIKLADLAQILDMSPFHFSRLFKLSTGKSPHQYLIQQRIEHAKQ 241 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L++ T + ++DIA F+S S++F+++ G +P+ YR Sbjct: 242 LLKQTDRRIIDIAYECGFNSHSHLSKQFRQMMGVTPKVYR 281 >UniRef50_Q30V01 Transcriptional regulator, AraC type n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30V01_DESDG Length = 308 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 71/134 (52%), Gaps = 3/134 (2%) Query: 6 ELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYI 65 + +E R +I++ +L W+E ++ +S++D+A ++ +S + +FR + YI Sbjct: 13 QEHAHETYRMRIMRAIL-WLEEHMNEAVSLDDMAAQAHFSPYHFHRIFRGVAGESVMAYI 71 Query: 66 RKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANI 125 R+ RL +A + + S+ DIA +++ ++FSR F+ FG SP R + A + Sbjct: 72 RRLRLEKAVHRLAYGSASVTDIAFDAGYEAHEAFSRAFRAQFGMSPSALRR--HVRKAGM 129 Query: 126 FPSFLIRQQQKTEC 139 P+ ++ + T+ Sbjct: 130 IPAGVLGESAMTKV 143 >UniRef50_C1FU00 Transcriptional regulator, AraC family n=8 Tax=Firmicutes RepID=C1FU00_CLOBJ Length = 290 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 6/151 (3%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 L + +M + L + +IE N+ I +E++++ + S + Q +F +PL EYIR Sbjct: 2 LGDEDMEWIERLNSAVNYIEKNIRETIDLEEVSKIACCSTYHFQRMFAYIADIPLSEYIR 61 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIF 126 +RR+ AA+ ++ + ++DI+L +DS +F+R FK + G +P R ++ + F Sbjct: 62 RRRMSLAAVDLQSGNEKVIDISLKYGYDSPTAFNRAFKSVHGIAPS--RAKEEGTILKAF 119 Query: 127 PS----FLIRQQQKTECRLINFPETPIFGNS 153 P IR + R+ I G S Sbjct: 120 PPISFKITIRGDIEMNYRIEKKDSFRIVGIS 150 >UniRef50_C0A4C8 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A4C8_9BACT Length = 309 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 59/100 (59%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L+++ +++E +L+ ++++A+++G S+ + LFR + Y + R+ A L+ Sbjct: 209 LRRITDFMEAHLDEEFRLDELAREAGMSKFHFCRLFRKTTGLSPSRYFIRLRMEMARRLL 268 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 R T++S++++ L + + S F++ F++ G P EYR + Sbjct: 269 RETSRSVIEVGLEVGYSSPSHFAQVFQREAGVPPSEYRRQ 308 >UniRef50_A6M032 Transcription activator, effector binding n=19 Tax=Bacteria RepID=A6M032_CLOB8 Length = 285 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 4/158 (2%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + + + +IE N+ I+I++IA+K+ S Q F +GEYIR+RRL Sbjct: 1 MKWIEGIGEAISYIEENITEEITIKNIAEKTFMSPFYFQKGFAMLCGFTVGEYIRQRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD--YWDLANIFPSF 129 A + T + ++DIAL + S SF++ F + G +P R A + F Sbjct: 61 LAGSDLVSTDEKIIDIALKYGYASPDSFTKAFTRFHGVTPTAVRKDGAMIKSFAPLKIKF 120 Query: 130 LIRQQQKTECRLINFPETPIFGNS--FKYDIEVSNKSP 165 L+ + +++ + G S FKY+ + P Sbjct: 121 LLEGGYIMDYKIVEKDSFTVMGVSKVFKYENAFAEIPP 158 >UniRef50_C0CY04 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0CY04_9CLOT Length = 295 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 14/219 (6%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L++ +E+IE +L+ I + D++++ GYS ++ LF + P+G YI +RRL RAA + Sbjct: 14 LERAIEYIETHLDENIDLGDVSREMGYSYYHMTRLFSAVLGEPVGRYISRRRLYRAAQQL 73 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKT 137 + + ++DIAL F S ++FSR FK LF +P YR +A L Sbjct: 74 VHSDRRIIDIALESGFQSPEAFSRAFKALFKTTPAGYRKAGLDLVATAKRQLLPGDVPHI 133 Query: 138 ECRLINFPETPIFGNSFKYDIEVSNKSPDEE-VKLRRHHLARCMKNFKTDIY-------- 188 + + PE +I+++ + R L F D+Y Sbjct: 134 AAGISHSPEI----LQMTEEIKIAGLRDITSISQNRIPQLWDQFLRFHGDLYELTETAYS 189 Query: 189 -FVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTR 226 + + D+ V +++++P+ T Sbjct: 190 ICETRQTAYAEDGDVTFSVMVGSPVPDFSNLPETLAQTT 228 >UniRef50_Q8A6I0 Transcriptional regulator, AraC-type n=21 Tax=Bacteroidales RepID=Q8A6I0_BACTN Length = 285 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 85/202 (42%), Gaps = 4/202 (1%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 ++ + QK + ++E+I +L I ++ +A+ S +S + + F+ P+G + Sbjct: 2 QQKKTTKEEYQKCVNVVVEYINQHLGEDIDLKSLARISNFSPFYFHRIMKAFLGEPIGTF 61 Query: 65 IRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLAN 124 I + R AA L+R + + DIA + + S S S+ F++ +G SP EYR+ + Sbjct: 62 IVRTRTEAAARLLRYSDIPIADIAYRIGYSSPSSLSKVFRQFYGISPLEYRNNKNF---V 118 Query: 125 IFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFK 184 I +IR + + + + P + D ++++ + + + Sbjct: 119 IMKPAIIRPDLELKSEIKSIPARNVIYIRLSGDYKLNDYGGTWGRLW-QFIKEQKLPMGD 177 Query: 185 TDIYFVSTFEPSTKSVDLLTVE 206 + +P + L + Sbjct: 178 FSPLCIYHDDPKVTPAEKLRTD 199 >UniRef50_B8I706 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I706_CLOCE Length = 284 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 11/220 (5%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + +++IE NL IS AQ + S + Q +F + VPL EYIR+RRL Sbjct: 1 MDWLNRMNKAIDYIESNLADKISYNKAAQIACCSTYHFQRMFSSITDVPLSEYIRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPS--- 128 AA ++ + ++D+A ++S ++FSR FKKL G P R D FP Sbjct: 61 LAAFELQTSDIKVIDVAFKYGYESPEAFSRAFKKLHGVMPTSAR--DIGISLKAFPKMTF 118 Query: 129 -FLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDI 187 I+ + R+ +FG +I + ++V L + Sbjct: 119 SISIKGDTEMNYRIEQREAFNVFGV--YTEISTDQEKAFDQVPLFFKRCDDDGTTDAINN 176 Query: 188 YFVSTFEPSTKSVDLLTVE-TFAGTVCEYADMPKEWTTTR 226 + T S E TF +C Y +PK+ + Sbjct: 177 LLGRFDDNYTISALYDYSETTFKYMLCNY--LPKDLSIPS 214 >UniRef50_A4BA20 Transcriptional regulator, AraC family protein n=2 Tax=Gammaproteobacteria RepID=A4BA20_9GAMM Length = 313 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 92/225 (40%), Gaps = 13/225 (5%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 LQ +L IE +LE +S++ +AQ + SR + LF + + IR+ RL RAA Sbjct: 28 NDRLQDVLANIESSLEEDLSVDQLAQLTHVSRFHFHRLFSATFGLGVMTLIRRLRLKRAA 87 Query: 75 ILVRL-TAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLA--NIFPSFLI 131 + S+ +I +DS ++F+R F+K FG +P ++R + + + P + Sbjct: 88 FRLAYRAGDSITNIGYDCGYDSPEAFNRAFRKHFGLAPSDFRRSPDFSVWAQHYDPIQTL 147 Query: 132 RQQ----QKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDI 187 R Q + +I P P+ + + + + + R+ + + Sbjct: 148 RNQHMPAPLPDVTVIEMPAIPLAVMPHRGNPARLSHTLQAFIAWRK---RNGLSPSHSRT 204 Query: 188 YFVSTFEPSTKSVDLLTVET---FAGTVCEYADMPKEWTTTRGLY 229 + + +P+ + D + G + + + T G Y Sbjct: 205 FNLVYDDPNEVTDDDYRFDLACEIQGELPADFEGMESRTIPAGRY 249 >UniRef50_C4XUB5 AraC family transcriptional regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XUB5_DESMR Length = 292 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 62/140 (44%), Gaps = 5/140 (3%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q+ + + +E L+ +++ DIA + +S + +F +G Y+R+ RL RAA Sbjct: 10 QRRVLAAMRLMEARLDEELALSDIAGAAHFSPYHFHRIFVGMTGETVGAYLRRLRLERAA 69 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH-----RDYWDLANIFPSF 129 + + + +AL F+S ++F+R F+ ++G SP +R + + P Sbjct: 70 QRLCYGDQPVTTVALEAGFESPEAFARAFRAVYGVSPSAWRQASRERKGPPETPKHLPPA 129 Query: 130 LIRQQQKTECRLINFPETPI 149 + + + P + Sbjct: 130 KEFVIMELDVVIKTLPLMKV 149 >UniRef50_C6QRS7 Two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QRS7_9BACI Length = 269 Score = 147 bits (371), Expect = 3e-34, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 67/129 (51%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 +N + K++Q L +IE N ++ I++E++A+ S + LF+ + + Y+ + Sbjct: 140 AKNSIQDGKVIQSALNYIEENYQNGITLEEVAEHVHISPFYLSKLFKKELKMNFVSYVTE 199 Query: 68 RRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFP 127 +++ +A L+ T ++ IAL L++ FS+ FKK+ G +P EYR R L+ Sbjct: 200 KKMQKAKELLENTDLPVIHIALELNYQEPNYFSKVFKKVVGITPSEYRKRSKKGLSKKKH 259 Query: 128 SFLIRQQQK 136 + ++ Sbjct: 260 NSVLNGNWL 268 >UniRef50_B6R2M9 Transcriptional regulator, AraC family n=3 Tax=Rhodobacteraceae RepID=B6R2M9_9RHOB Length = 283 Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats. Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 5/140 (3%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 +N+ +K + ++LE+I NL+ +S++ +A + SR + +F++ L IR+ Sbjct: 5 QNKAAYEKRMLRVLEYIYNNLDGDLSLDALADVACMSRFHWHRVFQSMRGETLATSIRRI 64 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPS 128 RL RAA+ + + + + +IA + S QSFSR FK +G +P ++R Y P+ Sbjct: 65 RLNRAALDLIQSKQPITEIAEQYGYPSAQSFSRAFKGEYGMAPGQFRESKY-----AAPT 119 Query: 129 FLIRQQQKTECRLINFPETP 148 ++ + E P Sbjct: 120 LETEKESIFSMHPVEIKEVP 139 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 146 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 60/110 (54%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 E E R + L+ ++E+IE N PI ++ +A+ + S F+ EY+ Sbjct: 180 PEQEGYRIERLKTVIEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNS 239 Query: 68 RRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 R+ +AA +R T ++++AL + F+S F+ F++ FGC+PREYR R Sbjct: 240 YRVQQAASRLRQTDAKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSR 289 >UniRef50_A0KJN2 Transcriptional activator n=5 Tax=Gammaproteobacteria RepID=A0KJN2_AERHH Length = 325 Score = 146 bits (369), Expect = 5e-34, Method: Composition-based stats. Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 1/130 (0%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 + ++++L++I NL+ P+ + ++A++S +SR +Q +F + + + Y+R+ +L +A Sbjct: 43 QLTRIERVLDYIHANLDLPLGLAELAEQSCWSRWQLQRVFLHETGLTVAHYVRELKLSQA 102 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQ 133 A + + +LD+AL F S+ SFSR FK+ FGCSP YR R L P Sbjct: 103 AEALLSGRQRVLDLALCYGFGSEVSFSRAFKQQFGCSPLAYRKRGLR-LGLRTPLVRAAL 161 Query: 134 QQKTECRLIN 143 Q RL+ Sbjct: 162 PQPMPARLVQ 171 >UniRef50_A3VBK3 Transcriptional regulator, AraC family protein n=2 Tax=Rhodobacterales RepID=A3VBK3_9RHOB Length = 278 Score = 146 bits (369), Expect = 6e-34, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 84/191 (43%), Gaps = 11/191 (5%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 +K L ++L+++ NL+ +S++ +A + SR + +F P+ +IR+ RL RA Sbjct: 5 YEKRLLRVLDYVYDNLDGDLSLDTLADVAALSRFHFHRVFTAVTGEPVAHFIRRVRLHRA 64 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI-- 131 + + + + ++A + +D+ +SFSR F+ FG +P E+R A P + Sbjct: 65 GLELLSSDAPVAEVAAKMGYDNARSFSRSFRDAFGRTPSEFR-----AHAQPVPPLRLGT 119 Query: 132 -RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFV 190 + Q + ++ + P + + + + K +AR + + + Sbjct: 120 SGETQMYDVKIEDQPARRLGVIDHR---GPYIQIGEAFEKAGSTVMARGLGPHLGAMLGI 176 Query: 191 STFEPSTKSVD 201 +P + + Sbjct: 177 YFDDPENGAAE 187 >UniRef50_A6LYZ8 Transcription activator, effector binding n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYZ8_CLOB8 Length = 290 Score = 146 bits (369), Expect = 6e-34, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 7/211 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M ++I+ + + +IE NL P+++E +A YS + F+ M +G YIR RRL Sbjct: 1 MKDKQIIGRAIIFIETNLYEPLTVESVASAVSYSYYHFHRYFQVVMGETIGSYIRSRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 +AA + + K +LDIA+ L+F+S +SF+R FKK +G +P EYR L I Sbjct: 61 QAAYNLVHSKKRILDIAILLYFESAESFTRAFKKRYGITPMEYRENGIDVLIGNHNPMQI 120 Query: 132 RQQ-----QKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARC--MKNFK 184 + + ++ F + G + IE +N E + + M N + Sbjct: 121 DKITESNYANLQPEIVTFQPKCVVGFRYYMSIEKNNSIEMWEKLNAQLEKQKYISMNNNR 180 Query: 185 TDIYFVSTFEPSTKSVDLLTVETFAGTVCEY 215 IY S F G Sbjct: 181 YSIYETSGTCLQNTFNKNSETTLFIGIETSD 211 >UniRef50_P43463 HTH-type transcriptional activator aarP n=3 Tax=Providencia RepID=AARP_PROST Length = 135 Score = 146 bits (369), Expect = 6e-34, Method: Composition-based stats. Identities = 54/123 (43%), Positives = 80/123 (65%), Gaps = 2/123 (1%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 ++ + I+ ++L WIE NL + +S++DIAQ SGY++ ++Q +FR + +PLGEYIR+R Sbjct: 12 KHTQFQSSIISEILVWIEGNLTNRLSLDDIAQHSGYTKWHLQRVFRKIVGMPLGEYIRRR 71 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD--YWDLANIF 126 R+C AA ++ T ++DIAL FDSQQSF++ FK G SP YR D Y DL + Sbjct: 72 RICEAAKELQTTNLQVIDIALKYQFDSQQSFAKRFKAYLGISPSLYRLSDTGYNDLLLLE 131 Query: 127 PSF 129 P Sbjct: 132 PKV 134 >UniRef50_UPI0001C357C1 AraC family transcription regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C357C1 Length = 307 Score = 146 bits (368), Expect = 7e-34, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 98/232 (42%), Gaps = 16/232 (6%) Query: 8 TENEMIRQKILQQLLEWIECNL-EHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 ++ + + ++++IE +L E + +E IA YSR ++ +F + PL Y+ Sbjct: 16 ANHKRNNIEEIAAVIDYIEEHLMEEKMDLESIASIFHYSRYHLHRMFASVAGFPLHTYLT 75 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR-DYWDLA-- 123 +RRL AA L+ T + +L+IAL+ +++Q+SFSR F+K F SP YR + D++ L Sbjct: 76 RRRLTEAARLLVWTDRPVLEIALASGYETQRSFSRAFQKYFQHSPSRYRKKGDFFPLQLK 135 Query: 124 -NIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSN----KSPDEEVKLRRHHLAR 178 ++F +R + + E + G + K R Sbjct: 136 YDVFRREKLRGDRIITVTMREAKELSVVGYCSSTKGGFAGIGRCWRRFHAKKDRISGCTN 195 Query: 179 CMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPK---EWTTTRG 227 + Y ++ P + A + EY PK ++T G Sbjct: 196 KEFLIGINDY---SYYPCKGLDQVFRYIAGAEVMQEYTA-PKGMQKFTLPAG 243 >UniRef50_A9KRP2 Transcriptional regulator, AraC family n=7 Tax=Bacteria RepID=A9KRP2_CLOPH Length = 292 Score = 146 bits (368), Expect = 7e-34, Method: Composition-based stats. Identities = 49/222 (22%), Positives = 86/222 (38%), Gaps = 14/222 (6%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M K +++++IE NL+ IS + I+Q +G S N Q +F PL EYIR RRL Sbjct: 1 MDWIKKFNEVIKYIEDNLKGEISYDTISQIAGCSIYNFQRMFSYIADKPLSEYIRNRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR--DYWDLANIFPSF 129 AA + + ++DI+ ++SQ +FSR F+ G P R+ + Sbjct: 61 LAAFDIMNSKDRIIDISFKYGYESQDAFSRAFRSFHGVLPSAARNETVQLKSCPKLSFQI 120 Query: 130 LIRQQQKTECRLINFPETPIFGNS--------FKYDIEVSNKSPDEEVKLRRHHLARCMK 181 I+ + +++ FP + G + FK ++ + + R L + Sbjct: 121 NIKGENYMNYQIVQFPAFKVVGITNRINTSEAFKIVPQIWENAWKDGTMNRFIELLKKTD 180 Query: 182 NFKTDIYFVSTFEPSTKSVDLLTVETFAG----TVCEYADMP 219 + S ++ + C Y P Sbjct: 181 YRPAGFLGICADGKWGNSEEMDYILAITNHVDVPECNYVSPP 222 >UniRef50_A9KFE4 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=A9KFE4_COXBN Length = 284 Score = 146 bits (368), Expect = 7e-34, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 89/198 (44%), Gaps = 3/198 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + L +++E+I +L+ +++ ++ + +S+ + LF + + L +YIR RL Sbjct: 1 MNYEYQLIKVIEFIGKHLDEKLTLAQLSDVACFSKYHFHRLFTAYTGLSLQQYIRWLRLK 60 Query: 72 RAA-ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFL 130 RAA L+ K++++IA++ F+S ++F+R FK++ G SP ++ + W L Sbjct: 61 RAAHQLIVDKDKTIIEIAINAGFESNEAFTRAFKQVCGVSPTKFISQPSWHGWEKSAYCL 120 Query: 131 IRQQQK-TECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 + + + N + E +S ++ + + +K + + Sbjct: 121 SNRGKMTMNIVIKNMQARRLAVVEHHGHPEKVGESINKLINWAKSQAMN-LKPKAGEAFG 179 Query: 190 VSTFEPSTKSVDLLTVET 207 + +P T + + Sbjct: 180 FAYDDPKTTEPEAFQFDL 197 >UniRef50_Q97LX8 Transcriptional regulator (HTH_ARAC-domain) n=1 Tax=Clostridium acetobutylicum RepID=Q97LX8_CLOAB Length = 288 Score = 146 bits (368), Expect = 7e-34, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 71/147 (48%), Gaps = 2/147 (1%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + L ++E NLE I ++A + S+ +F+ + LG+YIR+R+L A + Sbjct: 7 MNNALRYVEENLERNIESGEVANAAHMSKFYFLRIFKILTGMTLGDYIRERKLSLATKDI 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR--HRDYWDLANIFPSFLIRQQQ 135 T + ++DI+ +++ ++F++ FK+L G SP E R + + + +++ ++ Sbjct: 67 VSTNQKIIDISYKYGYETPEAFTKAFKRLNGISPTEARKSKNNLKAIPPLSFQVIVKGEE 126 Query: 136 KTECRLINFPETPIFGNSFKYDIEVSN 162 ++ I G S + + N Sbjct: 127 NMNYKIETKKSFKIAGVSKRISTKEGN 153 >UniRef50_A6GAG6 Transcriptional regulator, AraC type n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAG6_9DELT Length = 279 Score = 146 bits (368), Expect = 8e-34, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 62/124 (50%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + + ++++ ++ +L+ + E +A +G S + +FR + ++R+ RL RAA+ Sbjct: 9 QRILRVVDHVQAHLDEDVDPETLADIAGLSLHHFHRVFRGLTGESVMGFVRRLRLERAAM 68 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQ 135 ++L + +AL + S ++F+R F+ FG PR YR + ++ P +R Sbjct: 69 QLKLGEAPVTQVALEAGYGSHEAFTRAFRNRFGVPPRAYREQTRVEVEVGVPRVELRDDP 128 Query: 136 KTEC 139 C Sbjct: 129 ALTC 132 >UniRef50_C2LMQ2 Regulatory protein n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LMQ2_PROMI Length = 285 Score = 145 bits (367), Expect = 9e-34, Method: Composition-based stats. Identities = 53/141 (37%), Positives = 80/141 (56%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 + KI+ +L+WIE NL PIS D+ +KSGYS+R Q LF + + +YI R+L Sbjct: 1 MHDKIINDILDWIEDNLTKPISTIDVIKKSGYSQRYFQDLFLHKTKSTIAKYILSRKLSM 60 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIR 132 +AIL++LT S+ +I+ F SQQ+FSR FK+ F +P YR +WD P + Sbjct: 61 SAILLKLTRYSISEISNDYSFTSQQNFSRAFKRYFKVTPEFYRKSKFWDFRYYRPQHKVF 120 Query: 133 QQQKTECRLINFPETPIFGNS 153 +K C+LI + + N+ Sbjct: 121 DFKKINCQLIYLSKDRLLDNN 141 >UniRef50_C9NSN9 Transcriptional regulator AraC family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NSN9_9VIBR Length = 284 Score = 145 bits (367), Expect = 9e-34, Method: Composition-based stats. Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%) Query: 20 QLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRL 79 + +E+IE +L IS+ IA S YS + +F+ + EY+RKRRL AA + Sbjct: 6 KSIEYIEQHLYDKISVHQIAAASHYSTYHYSRVFKALVGDTPKEYLRKRRLTMAAKRLLT 65 Query: 80 TAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD------YWDLANIFPSFLIRQ 133 +LD+A+ FDSQ++F+R FK LF +P +YR + Y + N ++ Sbjct: 66 EEVGILDLAMDCQFDSQEAFTRAFKALFNMTPAQYRKMNEPFRLLYKNQINEDDLSFLQN 125 Query: 134 QQKTECRLINFPETPIFGNSFKYDIEVSNKS 164 + E +I P + G + +Y E + Sbjct: 126 RISMEPEIITQPAIKLVGIANQYTDEDLSLP 156 >UniRef50_D1ARB2 Transcriptional regulator, AraC family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ARB2_SEBTE Length = 285 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 49/147 (33%), Positives = 77/147 (52%), Gaps = 2/147 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M L LE+IE NLE+ + I+ IAQ S N+Q +F V LGEYIR RRL Sbjct: 1 MNWISALNNALEYIENNLENDVKIKKIAQICLCSEYNVQRVFSIISGVTLGEYIRNRRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR--DYWDLANIFPSF 129 +AA+ +R T ++DIA +++S +FS+ FK G SP++ R R + + S Sbjct: 61 KAAVDIRETNMRIIDIAFKYNYESADAFSKAFKNFHGISPKDGRVRSNELKTYPKLHFSM 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKY 156 +I+ ++ + R+ + + G Y Sbjct: 121 IIKGGKEMKNRIAEKGKLRVIGMKRTY 147 >UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABU8_9CLOT Length = 412 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 57/107 (53%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 NE ++Q+ + +I + I++E IA + +F+ + V Y+ K R Sbjct: 304 NESKNPVLIQKCISYINEHYNEDINLETIANIVHLNPSYFSSIFKKEVGVSFSNYLNKIR 363 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 + ++ +L++ T S+++IAL + F+ Q FS+ FK L +P++YR Sbjct: 364 IEQSKLLLKNTDSSIVEIALEVGFEDQSYFSKVFKNLTKMTPKQYRQ 410 >UniRef50_C6IS69 Transcriptional regulator n=11 Tax=Bacteroides RepID=C6IS69_9BACE Length = 315 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 64/111 (57%), Gaps = 1/111 (0%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 ++++ + + +++++I+ +L+ P+ ++ IA+ + +S + +F + +YI++ Sbjct: 6 KSKIEYRSRINRVMDYIDIHLDQPLELKSIAEIANFSPFHFHRIFTFLIGETPIDYIQRL 65 Query: 69 RLCRAAILVRLT-AKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 R+ +AA +R S+ +IA S F + FSR FKK FG +P ++R + Sbjct: 66 RIEKAACRLRENMDISISEIADSCGFCTVSLFSRVFKKFFGLTPSQFRKME 116 >UniRef50_A8FAK9 Transcriptional regulator n=3 Tax=Bacillus RepID=A8FAK9_BACP2 Length = 290 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 6/213 (2%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +Q +E+IE NL++ ISI++I+ KS +S + Q LF+ + EYIR RRL Sbjct: 1 MDYYERIQHSIEFIEENLQNNISIKEISSKSCFSAFHFQRLFQAITGFSVQEYIRNRRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR------HRDYWDLANI 125 AA L++ T +++L IA++ + SQ++F+R F + FG +P +R + Sbjct: 61 EAARLLKETKQNVLHIAIAFQYGSQEAFTRAFVQFFGVTPGRFRKEGVMLKKQNKMDFLA 120 Query: 126 FPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKT 185 + S L + + + I G ++ +++ D + + + Sbjct: 121 YQSKLDSELNMNKPVITQLGNFYIIGYEYQTNLQNEEYFTDIPLFYMDFGKKEYYQQIQK 180 Query: 186 DIYFVSTFEPSTKSVDLLTVETFAGTVCEYADM 218 I + ST D G E D+ Sbjct: 181 KIAPHMAYGISTSFQDDGHFSFVVGEEVEDFDL 213 >UniRef50_A4B9Y7 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4B9Y7_9GAMM Length = 297 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 6/142 (4%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +Q L++ IE NL +++ +A S + Q F++ + LG YIR RRL RAA L+ Sbjct: 8 IQTLVDRIEANLADDVNVLGLADAFHMSPWHFQRTFKSLIGDTLGGYIRGRRLTRAAQLL 67 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKT 137 + +S++DIA+S+ F+S ++FSR FK F +P+ +R P + Q Sbjct: 68 LESRRSVIDIAVSVGFNSHEAFSRSFKAYFNVTPKAFRAERPAITLREKPLLTLELFQHL 127 Query: 138 ------ECRLINFPETPIFGNS 153 + PE + G Sbjct: 128 ADGMDQNPVITERPEQHLIGQQ 149 >UniRef50_C6XP49 Transcriptional regulator, AraC family with acetamidase/formamidase activity n=2 Tax=Alphaproteobacteria RepID=C6XP49_HIRBI Length = 771 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 22/202 (10%) Query: 19 QQLLEWIECNLEHP-ISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 +++ + IE L P +++ IA++ G S R +Q LF +++ RRL R + + Sbjct: 206 ERIFQSIEIRLSDPDLNVYQIAKEQGVSTRYLQKLF-ETTGDSFSHFVKDRRLERCRLDL 264 Query: 78 R---LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQ 134 R +++ +I F+ SFSR F++ +G SPR+YR R + + P + Sbjct: 265 RSPLHAQRTISEILFQWGFNDSASFSRAFREKYGISPRDYR-RAPPEEIEVNPVLQRGRP 323 Query: 135 QKTECRLINFPETPIFGNSFKY-DIEVSNKSPDEEVK----LRRHHLARCMKNFKTDIYF 189 + + + I+ F Y D+E +N +E V+ +R HHL + YF Sbjct: 324 EGLKDQKIDK--------EFSYSDLEENNDHDEESVEVQNSVRHHHLPATPETIHWG-YF 374 Query: 190 VSTFEPS--TKSVDLLTVETFA 209 S +P+ +S D +T+E Sbjct: 375 SSALKPAVTVQSGDYVTIEALT 396 >UniRef50_A6M0I1 Helix-turn-helix-domain containing protein, AraC type n=2 Tax=Clostridium RepID=A6M0I1_CLOB8 Length = 127 Score = 145 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 38/107 (35%), Positives = 66/107 (61%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +++ +E+IE NL I ++++A K+ S+ + +F + + P+ EYIRK+RL Sbjct: 1 MNYEACIKKSIEYIENNLNKKIQLKELADKAFLSKYHFHRVFHSVVGEPVAEYIRKKRLE 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 AA + T ++DIAL F +Q+SF++ FKKL+G P+E+R Sbjct: 61 EAANELLTTENKIIDIALKYQFSNQESFTKAFKKLYGIPPKEFRKNK 107 >UniRef50_A8I184 Transcriptional regulator n=3 Tax=Rhizobiales RepID=A8I184_AZOC5 Length = 310 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 33/109 (30%), Positives = 60/109 (55%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 ++ + +++++++I NL IS+ D++ + S + FR+ + VP +I Sbjct: 199 QSPTVEHTKMRRVIDYINDNLASEISLSDLSDIACLSHHHFARAFRSAVGVPPHRFISSL 258 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 RL RA ++ T S+ +IA S F SQ +F+R F++ G SP EYR + Sbjct: 259 RLQRAQEMLAHTQSSLTEIAYSCRFSSQSTFTRAFRRHVGMSPGEYRRK 307 >UniRef50_B3QWJ9 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=B3QWJ9_CHLT3 Length = 331 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 83/213 (38%), Gaps = 16/213 (7%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 + + +++IE +L +S+E IA+ + +S + +F + L +I++ R+ +AA + Sbjct: 19 RINRAIDYIETHLSEKLSLETIAKAAFFSPFHFHRIFHGLVGETLNRFIKRLRVEKAARM 78 Query: 77 VRLT-AKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQ 135 + +++ DIAL F + + SR FK+ F SP +R + I +F Q Sbjct: 79 LADNPKQTVSDIALDCGFSTTSTLSRAFKETFSMSPTAWRKASSATQSKICQTFRKTHQP 138 Query: 136 KTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEP 195 R + Y S+ +++ + +K+ Sbjct: 139 IGSARKN-------YVIHTSYFDRASHHQTWRIEMPKQNEIQVTVKDMPEMTVAYVRHIG 191 Query: 196 STKSVDLLTVETFAGTVCEYADMPKEWTTTRGL 228 + KS + L F + W RGL Sbjct: 192 AYKSNEALFQGLFEKLM--------TWAGPRGL 216 >UniRef50_A5W8X4 Transcriptional regulator, AraC family n=13 Tax=Pseudomonas RepID=A5W8X4_PSEP1 Length = 291 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 34/98 (34%), Positives = 57/98 (58%) Query: 19 QQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVR 78 +QL++++E +L+ PI++E++A + S + +FR +P +Y+ RRL RA L+R Sbjct: 190 RQLVDYLEAHLDQPITLEELALRCNLSEYHFARMFRASFGLPPHQYLLARRLHRACQLLR 249 Query: 79 LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 L + +IAL F S FS F++ G +P EYR Sbjct: 250 LGVLPLGEIALLCGFASASHFSNRFRQALGATPGEYRK 287 >UniRef50_A6GKR6 Transcriptional regulator, AraC family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GKR6_9DELT Length = 306 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 93/249 (37%), Gaps = 36/249 (14%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 N ++ + + ++IE NL +S+E++AQ++ +S + L+ L ++I + R Sbjct: 3 NGEEYRRRINRAQDYIEQNLGRSLSLEEVAQQAAFSPYHFHRLYTAMTGESLYQFILRLR 62 Query: 70 LCR-AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW-------- 120 L + AA+ V +S+ +IAL F S +F+R FK FG S EYR R Sbjct: 63 LEKAAAVAVACPHRSITEIALETGFSSPATFARAFKAKFGVSASEYRGRKDRKAVGKDRN 122 Query: 121 -----------------DLANIFPSFLIRQQQKTECRLINFPET-PIFGNSFKYDIEVSN 162 ++ N FP+ I + + +L P G+S ++ + Sbjct: 123 ALRKDRNAAASTRPYLGEVMNTFPAQSINVEDHPQKQLAYLRHVGPYAGDSALFE-GLWG 181 Query: 163 KSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVET--FAGTVCEYADMPK 220 + + +++ + P D L + E + Sbjct: 182 RYCA------WAGPRGLLGAPNSEMVCIYHDNPEITEDDKLRISLGVTVAPGTETSGEIN 235 Query: 221 EWTTTRGLY 229 T G Y Sbjct: 236 LLTIPAGKY 244 >UniRef50_B4WW69 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WW69_9SYNE Length = 291 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 35/101 (34%), Positives = 57/101 (56%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 + L + +I LE I + D+AQ G S+ + F+ M + +Y+ ++R+ RA Sbjct: 189 DRKLLLVTRYIADALEQDIKLADLAQLVGVSQSHFSRQFKKSMGLTPYQYLLQQRIERAK 248 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L++ T +S++DIAL FDS FSR+F+K G +P YR Sbjct: 249 QLLKQTQQSLVDIALVCGFDSHSHFSRQFRKATGMTPSAYR 289 >UniRef50_C8P1I3 AraC family transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1I3_ERYRH Length = 288 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 13/214 (6%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + LQ +++IE +L+ + +EDIA S YS + LF + + +Y+R+RRL Sbjct: 7 MNTLEHLQNAIDYIETHLDSSLKLEDIAIHSNYSPYHFHNLFSALTGMGVMDYVRRRRLS 66 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 A +L ++D+A+ ++S +SFS+ FKK +P E + R L FP + Sbjct: 67 EAGMLFISQKVKVIDLAVHYDYESAESFSKAFKKQHHYTPSEIKKRK-GSLQTTFPIKIT 125 Query: 132 RQQQ---KTECRLINFPETPIFG--NSFKYDIEVSNKSPDEEVKLRRHHL---ARCMKNF 183 Q+ K + R+ I G +F Y+ N + +E+ + + A+ + F Sbjct: 126 HNQKGAVKMKMRIEEKESVNIAGYQKTFSYE----NGANLKEIPMFWDEINQSAKDLDLF 181 Query: 184 KTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYAD 217 K + + + + + GT C++ + Sbjct: 182 KMNDHKIEGIVGLCQQASDGFMTYLIGTSCDFQE 215 >UniRef50_C3RPB0 AraC-family transcriptional regulator n=3 Tax=Bacteria RepID=C3RPB0_9MOLU Length = 286 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 64/121 (52%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +Q L++IE N + I I+ +A + S+ Q LF + +Y++ RRL Sbjct: 1 MYAWQEIQVTLDYIEENYDKEIDIDKLAAIAHLSKYYYQRLFFRLTKKTVNDYVKLRRLE 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 +AA ++ T K +LDIA++ F +F+R FK+++ +P +YR++ I P + Sbjct: 61 KAANQLKNTEKRILDIAIACGFSGHSAFTRAFKEVYKITPDDYRNQKIHLDHFIKPDLQL 120 Query: 132 R 132 Sbjct: 121 N 121 >UniRef50_UPI0001C368D7 AraC-family transcriptional regulator n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368D7 Length = 320 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 76/201 (37%), Gaps = 3/201 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + +L+++E +L ++ E +AQ +G S Q LF+ P+ EY++ RRL Sbjct: 1 MHAWEAIDGVLDFMEEHLREEMNTEALAQSAGLSPFYFQRLFKRLTGRPVLEYVKMRRLA 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 AA + K +LDIA+ F S SF+R FK+ +G SP +YR + N + Sbjct: 61 LAASALEDREKRILDIAVDYGFSSHASFTRAFKEAYGISPEKYRK--DRPMLNTCEKPEL 118 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVS 191 + + I + + E + ++ D+ Sbjct: 119 SMRYHLVDEGVPLIAGDIVLEIRRMRLTEPEWYLGLETAVEIKKQVPAGESTGIDVPGQL 178 Query: 192 TFEPSTKSVDLLTVETFAGTV 212 K + G Sbjct: 179 WKAFHEKK-PAVDGLAQEGPE 198 >UniRef50_P28816 Transposon Tn10 tetD protein n=29 Tax=root RepID=TETD_ECOLX Length = 138 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 48/121 (39%), Positives = 75/121 (61%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 + ++ +++ +L WIE NL+ + ++D+A K+GY++ Q LF+ V L Y Sbjct: 17 QLEYDDRQFHTTVIKDVLLWIEHNLDQSLLLDDVANKAGYTKWYFQRLFKKVTGVTLASY 76 Query: 65 IRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLAN 124 IR RRL +AA+ +RLT K++L+IAL FDSQQSF+R FK +F +P YR W+L Sbjct: 77 IRARRLTKAAVELRLTKKTILEIALKYQFDSQQSFTRRFKYIFKVTPSYYRRNKLWELEA 136 Query: 125 I 125 + Sbjct: 137 M 137 >UniRef50_A9KM10 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KM10_CLOPH Length = 136 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 37/98 (37%), Positives = 67/98 (68%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + ++ ++IE N + I+++DIA+ GYS+ ++ +F + + +YI +RRL AA L+ Sbjct: 5 ISKVKKYIEENFKDDITLDDIAKNVGYSKYHLNRMFLENTGLTIHKYICERRLTEAADLL 64 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 T +S++DIALS+ + SQQ+F+ FK++F C+P +YR Sbjct: 65 LYTDQSIVDIALSIGYTSQQAFTLAFKQMFDCTPYKYR 102 >UniRef50_C5RJ15 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJ15_CLOCL Length = 290 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 3/161 (1%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 E M+ + + +IE NL+ I + ++A+++ S + +F +PL EYIR+R Sbjct: 4 EGVMVWLDRMNSAINYIEENLDGEIEMGEVARRACCSEYHFTRMFSFITDIPLNEYIRRR 63 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR--HRDYWDLANIF 126 +L A ++ + ++D+A +DS SF+R F+ + G +P E R + A I Sbjct: 64 KLTLAGFELKNSDIKIIDLANKYGYDSPNSFTRAFQGMHGVTPSEARILGVEIKSYAPIS 123 Query: 127 PSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVS-NKSPD 166 I R++ +FG S E S PD Sbjct: 124 FLITINGGIGMNYRIVEEDALTLFGISLTTRREESFETIPD 164 >UniRef50_B2VKB8 Regulatory protein SoxS n=1 Tax=Erwinia tasmaniensis RepID=B2VKB8_ERWT9 Length = 141 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 43/104 (41%), Positives = 67/104 (64%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 + I+ L WI+ NL +SI+++A KSGYS+ ++Q +FR LG YIR+RRL Sbjct: 1 MHDDIINTLTHWIDNNLGKNLSIDEVAAKSGYSKWHLQRMFRTVTKQTLGGYIRERRLTL 60 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 AA +R + + + DIA+ +DSQQ+FSR F++ F +P +YR+ Sbjct: 61 AAEALRQSHRPVFDIAMQYGYDSQQTFSRVFRRQFSQTPTDYRN 104 >UniRef50_C5D8H7 Two component transcriptional regulator, AraC family n=3 Tax=Geobacillus RepID=C5D8H7_GEOSW Length = 515 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 56/113 (49%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 + + ++I+ + HP+++E++A+ G S LF++ + +Y+ + Sbjct: 401 AWRHQQANGKIGKAKDYIDEHYHHPLTLEEVAEYVGISPYYFSKLFKDRFGMTFIDYVTE 460 Query: 68 RRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 R+ RA + KS+ +I + ++ FSR FKK G SP EYR + ++ Sbjct: 461 VRIARAKKEMADPNKSLKEICFLVGYNDPNYFSRVFKKHTGMSPTEYRKKLHF 513 >UniRef50_B0C647 Transcriptional Regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C647_ACAM1 Length = 204 Score = 143 bits (362), Expect = 3e-33, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 61/101 (60%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q+ L ++L++I+ +L + I++ D+A S+ + LF+ + +Y+ +R+ RA Sbjct: 102 QRQLLKVLDYIDAHLGNEITLADLAVLVDISQFHFGRLFKQSLGRSPYQYLMLQRVERAK 161 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L++ T + +++IAL F+S F R+F+++ G +P+ YR Sbjct: 162 TLLKRTNQPIVEIALECGFNSHSQFGRKFRQMTGMTPKVYR 202 >UniRef50_A4BA46 Transcriptional regulator, AraC family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BA46_9GAMM Length = 293 Score = 143 bits (362), Expect = 3e-33, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 8/181 (4%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 R L QLL++I ++ P+S++ +A +S +SR +Q +F + + +Y+R+ +L A Sbjct: 6 RFNRLDQLLDYIHRHIHEPMSLDTLAAQSAWSRWQLQRVFVAYTGYTVAQYVRELKLSLA 65 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANI------FP 127 A + + +LDIALS F S+ +FSR FK+ F SP +YR R Sbjct: 66 ADCLLENSDRVLDIALSFGFGSEVAFSRAFKQFFKVSPHQYRKRGLRSGIRTPLQRADVS 125 Query: 128 SFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEV--KLRRHHLARCMKNFKT 185 + RL + P G + + +S + E+ +H + T Sbjct: 126 RLNLPANTLYHVRLEHKPAFDFCGLPTRINGLLSGQPNFEDRIPAAWQHFQQLTHRRLPT 185 Query: 186 D 186 D Sbjct: 186 D 186 >UniRef50_C4UL45 Putative uncharacterized protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UL45_YERRU Length = 280 Score = 143 bits (362), Expect = 3e-33, Method: Composition-based stats. Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 11/221 (4%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 +++ +L W+E N+ SI + ++GYSRR ++L F + PLGEY+ +RR+ RAA+L Sbjct: 5 VVRYILSWVEENIYTGASIGKLVDETGYSRRTLELWFLKYSGFPLGEYLLRRRMSRAAML 64 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQK 136 +R+T S+L+++ HF S Q+F+R F+ G +P +YR +D W + + L+ Sbjct: 65 LRMTELSILEVSTMFHFYSSQNFTRSFRIFSGVTPTKYRKQDKWSVKLLQRPLLMEDTHN 124 Query: 137 TECRLINFPETPIFGNS----FKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVST 192 + PE + G+S + + + +K + N ++ Sbjct: 125 LKAEHCVLPELKLRGSSVVCAHNFILPLVEDDLARRMKSAVSSIR---DNSGNEVCIAFR 181 Query: 193 FEP----STKSVDLLTVETFAGTVCEYADMPKEWTTTRGLY 229 P S ++ VE + E + +E G Y Sbjct: 182 IMPSASLSASRDAVINVEMIIHDMDEKKEGTEEIVIPAGEY 222 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 143 bits (362), Expect = 3e-33, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 59/102 (57%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 ++ +++LLE++E + I++ED A+ YS + F+ +M VP +Y+ + RL +AA Sbjct: 232 RERMKRLLEYMEEHYGEKITVEDGAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAA 291 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 ++ T + +A FD+ F+R F++ +G +P EYR Sbjct: 292 GMLLTTPDPVTAVAQRCGFDNISYFNRLFRRKYGKTPGEYRK 333 >UniRef50_C9PI32 Arginine pathway regulatory protein ArgR repressor of arg regulon n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PI32_VIBFU Length = 299 Score = 143 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 62/119 (52%) Query: 4 DKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGE 63 DK+ + Q LQQ L +E NLE P+S +++A+ SRR ++ LF+ ++ Sbjct: 181 DKQRVTSGAEMQPRLQQALALMESNLEEPLSSDELAELVHISRRQLERLFKRYLDTMPAR 240 Query: 64 YIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDL 122 Y + RL +A L++ T +S++ I L F S FS +K + +PR+ R + + Sbjct: 241 YYLQLRLKKARHLLQTTNQSVVQIGLMCGFSSGPHFSSAYKAHYDMTPRDERAKRFKTF 299 >UniRef50_B8CLS6 Transcriptional regulator, AraC family n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CLS6_SHEPW Length = 303 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 13/207 (6%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 ++++L +I +L+ P+S+EDIA+ S SR +Q +F+ + + +Y+R+ +L AA Sbjct: 9 RIERVLNFIHTHLDQPLSLEDIAEHSQCSRWQLQRIFQQQTGLNVAQYVRELKLSIAADK 68 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR----DYWDLANIFPSFLIR 132 V MLDIA L F+S+ SFSR FK+LFG SPREY+ R + I P F Sbjct: 69 VLSGQSRMLDIAYELGFNSEVSFSRSFKQLFGVSPREYQRRGIRVGLRNPIAIRPEFTAN 128 Query: 133 QQQKT---ECRLINFPETPIFGNSFKYDIEVSNKSPDEEVK----LRRHHLARCMKNFKT 185 ++ T + + + ++G S +S+ + LR + + Sbjct: 129 KKIDTTFLQTHIEHRQAFTVYGLSSPIKGVLSDAPDFSSIVPDTWLRLFDIIDGVLPLAG 188 Query: 186 DIYFVSTFEPSTKSVDLLTVETFAGTV 212 ++ V + + + ++ +AG Sbjct: 189 NMLGV--VDTLSLKTEQQSIRYWAGLE 213 >UniRef50_B7LRE5 Putative uncharacterized protein n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LRE5_ESCF3 Length = 266 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 8/196 (4%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + + WI N+E PI++ED+ + SGYSRR++ LF + + EY+R +RL A L+ Sbjct: 1 MINIFAWINKNIESPINVEDLVKISGYSRRHLHTLFMQYTGHSVAEYVRLKRLSYTAHLL 60 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKT 137 +LT S+LDI+L H+DS QSFSR FK+ + +P YR W F ++ Sbjct: 61 KLTNLSVLDISLRYHYDSPQSFSRVFKRYYQMTPLAYRRSQQWGKKIHF--VDPSERTDV 118 Query: 138 ECRLINFPETPIFGNSFKYDIEVSNKSPDEEVK------LRRHHLARCMKNFKTDIYFVS 191 + + G+ ++ +++S++ + ++ L + + Y+ S Sbjct: 119 VYDFVYYEGDTFSGSLHQFHLDMSSRLDFWQKAAMQINDMKFRSLQHTSQIRSSVSYYPS 178 Query: 192 TFEPSTKSVDLLTVET 207 S+ VD + + Sbjct: 179 LHSKSSMVVDYVYDDG 194 >UniRef50_A6UD97 Transcription activator effector binding n=14 Tax=Proteobacteria RepID=A6UD97_SINMW Length = 279 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 84/210 (40%), Gaps = 3/210 (1%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + + + +IE + IS++DIA +G SR ++ +F + YIR RRL AA+ + Sbjct: 4 IARAIWFIESHFAEDISLDDIAAAAGLSRYHLSRVFGLSAGRSISAYIRGRRLSGAALDL 63 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKT 137 +L++AL + S ++F+R F++ FG +P R + + ++ + + Sbjct: 64 ANGTSGILEVALEAGYGSHEAFTRAFREQFGVTPESIRKQGHVRNIDLLEPIRMDDTRTL 123 Query: 138 ECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEPST 197 + F E+P G E + + E + + N + + Sbjct: 124 KIEPPRFEESP--GLLLAGLAETYDYNRTEGIPSLWQRFSAYFGNIPGQRGNTAYGVCTQ 181 Query: 198 KSVDLLTVETFAGTV-CEYADMPKEWTTTR 226 + A + +P ++T R Sbjct: 182 SDGEAGRFRYMAAAEIRDNEALPAGFSTLR 211 >UniRef50_Q24TQ4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=Q24TQ4_DESHY Length = 305 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 1/162 (0%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 +M +Q+ L++ E +L I E +A+++ S + Q +F LG+YIR RRL Sbjct: 14 KMDWITGIQRSLDYTEAHLTEKIDYEMVAKQAYSSAFHFQRVFSILCGFSLGDYIRMRRL 73 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD-YWDLANIFPSF 129 RAA + T + ++ IAL +D+ +SFSR F + G +P E R + Sbjct: 74 ARAAEDLLCTDEKIIHIALKYGYDTPESFSRAFLRFHGITPTEARRGGTVKSFFRLSVKL 133 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKL 171 ++ + R+ I + + + + +E Sbjct: 134 ILSGGSTMDYRIEKKDAFKIICKKKQVNKPQGDSATEEISAF 175 >UniRef50_A4XMF1 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMF1_CALS8 Length = 518 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 57/115 (49%) Query: 4 DKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGE 63 + ++T ++I + + +++I N IS+ I+ ++ LF+ + V Sbjct: 400 NAKVTHEQIIHNDSINKAIDFINQNYNQEISLAQISAIFNFNPYYFSKLFKKYTGVSYKT 459 Query: 64 YIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 Y+ K R+ +A L++ ++KS+ +IA + F F + FKK G +P +R+ Sbjct: 460 YLTKLRIQKACELLKNSSKSIKEIAFMVGFSDPNYFIKAFKKFVGVTPSFFRNMP 514 >UniRef50_UPI0001B9EE80 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9EE80 Length = 285 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 74/212 (34%), Gaps = 10/212 (4%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + + + +IE N+ I + A+ + S + Q +F V L EYIR+RRL Sbjct: 1 MDWVQRMNEAIGYIEANITEEIDYAEAAKVACCSAYHFQRMFPFITDVTLSEYIRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFL- 130 AA ++ + ++D+AL +DS ++F+R F+ + G +P R A SF Sbjct: 61 LAAYELQNSDIKVIDLALKYGYDSPEAFARAFQNMHGTTPTAARQAGTKLKAYPRISFQF 120 Query: 131 -IRQQQKTECRLINFPETPIFGN------SFKYDIEVSNKSPDEEVKLRRHHLARCMKNF 183 +R + R+ + G Y+ + Sbjct: 121 SMRGAAEMNYRIEEMKAFSVVGFKKQVSTQRAYEEVPFLWKDAHAEGIFDKLWNYRAHEH 180 Query: 184 KTDIYFVSTFEPSTKSVDLLTVETFAGTVCEY 215 I + + V + Sbjct: 181 P--IRGILGVCADGDYGKNEYFDYIMSVVSTH 210 >UniRef50_A6W3J7 Transcription activator effector binding n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3J7_MARMS Length = 286 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 92/207 (44%), Gaps = 4/207 (1%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 +K + + ++I +L+ +++E + + +S+ + F +FM V + ++++ RL R Sbjct: 6 YYEKRMLAVCDYIYKHLDDDLTVEALCDVACFSKYHFHRQFTHFMGVGVFKFVQILRLKR 65 Query: 73 AAILVRLT-AKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR-DYWDLANIFPSFL 130 A+ + T K ++DIA+S FD +SFSR FKK + SP E+R D L F Sbjct: 66 ASYELVFTKEKRIIDIAMSAKFDHPESFSRAFKKAYLQSPSEFRRHPDLEKLGLHFHKLE 125 Query: 131 IRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFV 190 + + +++F T I + +S + R+ + K+ + + Sbjct: 126 RQLEPYMTVDIVHFDTTKIALLKHRGSPSRIMESVAIFREWRKS--SGLSPITKSRTFNI 183 Query: 191 STFEPSTKSVDLLTVETFAGTVCEYAD 217 +P+ + + A + E D Sbjct: 184 IYEDPAVVVAEDFRCDLAAEVMKEVDD 210 >UniRef50_B7DU32 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DU32_9BACL Length = 334 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 58/112 (51%) Query: 4 DKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGE 63 L ++ R +I+Q +++I+ +L +S+ IA S ++ LFR M + L Sbjct: 214 TPRLEPSKSPRSRIIQAAVDYIQSHLADELSLTRIAVYCSVSTYHLSHLFRKEMGMTLTA 273 Query: 64 YIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +I+ RL +A L+ ++ ++ +IA + F FS+ F+ +G P EYR Sbjct: 274 FIKSLRLKKARELLLNSSLTVSEIAYQVGFSDPNYFSKTFRVTYGLPPSEYR 325 >UniRef50_C6BZC0 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZC0_DESAD Length = 297 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 9/184 (4%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 + + ++L +I+ NL+ +S E +A+ + +S + +F+ + L E++R+ RL RA Sbjct: 8 YNERMMEVLLYIQRNLDGDLSPETLAELACFSVAHFHRIFKGMVGESLKEHVRRLRLERA 67 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQ 133 + + + ++++IAL F+S ++FSR FKK F SP ++R+ + + + I Sbjct: 68 SYRLCYSNTTVMEIALDAGFESPETFSRAFKKRFLVSPSDFRN-NSRTMLALGGDGKIHY 126 Query: 134 QQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFK-TDIYFVST 192 + TP + EV ++ DE + H+ K K + Sbjct: 127 RPDPNIESFELDSTP-------HSCEVEIRTRDEIQVVFIRHVGPYPKVTKAWEKLCGWG 179 Query: 193 FEPS 196 F Sbjct: 180 FGKG 183 >UniRef50_Q48413 Transcriptional activator ramA n=51 Tax=Bacteria RepID=RAMA_KLEPN Length = 113 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 43/107 (40%), Positives = 67/107 (62%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 I +++ ++EWI+ NL P+ I+DIA+ +GYS+ ++Q LF + LG YIR+R+L Sbjct: 3 ISAQVIDTIVEWIDDNLHQPLRIDDIARHAGYSKWHLQRLFLQYKGESLGRYIRERKLLL 62 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 AA +R T + + DI L FDSQQ+F+R F + F P YR ++ Sbjct: 63 AARDLRDTDQRVYDICLKYGFDSQQTFTRVFTRTFNQPPGAYRKENH 109 >UniRef50_C8ZY41 AraC family transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C8ZY41_ENTGA Length = 292 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 100/185 (54%), Gaps = 16/185 (8%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M K +Q L +IE NL +S ++IA+K+G S + Q +F+ + + + +Y++KRR+ Sbjct: 3 MDYTKDIQLALLYIENNLTGDLSSKEIAKKAGMSEFHFQRVFKKQLGMGVYKYLQKRRMA 62 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 A++L+ + +++IAL F SQ++FSR FK + PR+YR + F +F Sbjct: 63 HASLLLLKSELKIIEIALISGFSSQEAFSRVFKSYYQLPPRQYRIQ--------FKNFFR 114 Query: 132 RQQQKTECRLINFPETPIFGNSF-KYDIEVSN---KSPDEEVKLRRHHLARCMKNFKTDI 187 Q+ E ++ + + GN+F KY++ + S ++ VK+ + + +NF T + Sbjct: 115 GNQKMCETKINGW---LLSGNNFDKYEVTIDQMNFHSGNQSVKMSQTE-SLYTENFATVM 170 Query: 188 YFVST 192 VS Sbjct: 171 QQVSA 175 >UniRef50_A9KR18 Transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=A9KR18_CLOPH Length = 301 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 9/208 (4%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + L++IE NL I +AQK+ S N Q +F VP+ EYIR+RRL Sbjct: 1 MDMLTKMNAALDYIENNLTEDIDFTIVAQKACCSSYNFQRMFSFITDVPIAEYIRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFL- 130 +AAI ++ T ++D+AL +DS SFSR F + G +P E + A SF Sbjct: 61 QAAIELQNTNAKVIDVALKYGYDSTVSFSRAFSNIHGITPNEAKQSGVELKAYPKISFQI 120 Query: 131 -IRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 I+ +++ R+ +FG + + R+ H + Sbjct: 121 SIKGEKEMNYRIETKEAFDVFGIETVASLSGEDSFVSPAELWRKSHQNGDYERLFN---- 176 Query: 190 VSTFEPSTKSVDLLTV---ETFAGTVCE 214 S P S DL + E + T Sbjct: 177 ASGDLPKFISQDLCKIHGVENYRKTEGN 204 >UniRef50_C3BTE5 Transcriptional regulator, AraC n=1 Tax=Bacillus pseudomycoides DSM 12442 RepID=C3BTE5_9BACI Length = 303 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 93/204 (45%), Gaps = 5/204 (2%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 ++ +I+ +L +I+ NL + ++ +A+K+G S + +F+N + L +Y+ Sbjct: 12 MSNRSNRNLEIVIPILVYIQANLHEDLDLKVVAKKAGLSPFHFHRMFKNVVGETLKQYVL 71 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANI- 125 + +L +AA ++ + +L I+ L F + +SF+R FK+ F +P++YR + ++ Sbjct: 72 RIKLEKAAFALKYWDEKILSISNELGFKNPESFTRAFKREFQYTPKDYRQQFRKGELSLE 131 Query: 126 -FPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFK 184 SFL + E + +F + + D + + A+ K ++ Sbjct: 132 ERHSFLNQMTNVFEISPVTLKHVSPIDVAFIRNTGLYEDV-DTRLFHKLIQWAKDKKIYR 190 Query: 185 TD--IYFVSTFEPSTKSVDLLTVE 206 D + V P+ +LL + Sbjct: 191 NDCFLLGVGHDAPTITPKELLRFD 214 >UniRef50_B0C4S9 Transcriptional Regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C4S9_ACAM1 Length = 261 Score = 142 bits (359), Expect = 7e-33, Method: Composition-based stats. Identities = 32/107 (29%), Positives = 59/107 (55%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 I K L+ +L++I+ NL+ + + D+A S+ + +F+ M VP Y+ +RR Sbjct: 151 GSGIGSKRLRNVLDYIDANLDQNMGLADLAAVVDLSQHHFSSMFKESMGVPPYRYVLQRR 210 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 + +A L++ + S+ DIAL+ F Q ++ F+K G +P+ YR Sbjct: 211 IQQAKQLLKNDSLSITDIALTCGFADQSHMTKHFRKTVGITPKTYRE 257 >UniRef50_C5EQJ6 AraC-family transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQJ6_9FIRM Length = 289 Score = 142 bits (359), Expect = 8e-33, Method: Composition-based stats. Identities = 39/141 (27%), Positives = 79/141 (56%), Gaps = 4/141 (2%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 +I+Q+++++I+ +LE + E I++++GYSR ++ +F + + L YI++RRL AA Sbjct: 6 QIIQEVVDYIDSHLEDRLDAESISRQAGYSRYHLSRMFTSITGLSLHTYIQRRRLTEAAR 65 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIF----PSFLI 131 + T + ++DIALS + SQQ+F+ F+ LF +PR +R + + + + + Sbjct: 66 QLVFTDRPVMDIALSAGYGSQQAFTVGFRALFRTTPRAFRKKGDFHPLQLKFTADGTDAL 125 Query: 132 RQQQKTECRLINFPETPIFGN 152 R + + R + + G Sbjct: 126 RGDRIMDIRTMESGPIYLAGY 146 >UniRef50_C9YDH7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDH7_9BURK Length = 319 Score = 142 bits (359), Expect = 9e-33, Method: Composition-based stats. Identities = 34/116 (29%), Positives = 65/116 (56%), Gaps = 1/116 (0%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 M+ + + + +++++I+ +L+ I + +A + +S + LF +M Sbjct: 1 MQVSSAAQRSRTEYTQRMNRVMDYIDSHLDGDIDLAALADVAHFSPFHFHRLFAAWMGAT 60 Query: 61 LGEYIRKRRLCRAAILVR-LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 LG+Y+R+RRL AA+ + T S+L++AL + F S ++F+R FK FG SP +R Sbjct: 61 LGDYVRRRRLEVAALQLAGNTRISVLEVALGVGFGSGEAFARAFKLRFGQSPSAWR 116 >UniRef50_Q17ZV7 AraC-family transcriptional regulator n=7 Tax=Bacteria RepID=Q17ZV7_CLOD6 Length = 289 Score = 142 bits (359), Expect = 9e-33, Method: Composition-based stats. Identities = 44/145 (30%), Positives = 82/145 (56%), Gaps = 5/145 (3%) Query: 18 LQQLLEWIECNL-EHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 +++ L++IE +L + + + I+++ GYS+ ++ +F + + + YI++RRL AA + Sbjct: 8 IEKTLDYIEKHLLDEMLDLNVISKEIGYSKYHLHRMFTSVVGFSVHNYIQRRRLTEAARM 67 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY-RHRDYWDLANIFPSF---LIR 132 + T K +++IAL +D+Q+SFSR FKK+F SP + RH+D+ L F +R Sbjct: 68 LIFTEKPIIEIALISGYDTQRSFSRGFKKMFKRSPNFFRRHQDFLPLQLKFDIHNRKKLR 127 Query: 133 QQQKTECRLINFPETPIFGNSFKYD 157 + + +N + I G S K Sbjct: 128 GDMVLDVKKVNCADINIVGYSGKVR 152 >UniRef50_Q18D16 AraC-family transcriptional regulator n=6 Tax=Clostridium difficile RepID=Q18D16_CLOD6 Length = 303 Score = 142 bits (359), Expect = 9e-33, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 65/121 (53%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +Q L+ IE NL ISI ++A K+ S Q LF+ ++ + EYI+ RRL Sbjct: 1 MHAWESIQITLDLIEANLSEEISINELANKANLSPFYYQRLFKRLVNKTVMEYIKLRRLA 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 RA+ + +LD+AL+ F S ++F+R FKK +G +P +YR I P ++ Sbjct: 61 RASEYLAEHKNRILDVALNFGFASHETFTRSFKKAYGLTPEKYRANPVKLNHFIKPELIL 120 Query: 132 R 132 Sbjct: 121 N 121 >UniRef50_Q180J9 AraC-family transcriptional regulator n=4 Tax=Clostridium difficile RepID=Q180J9_CLOD6 Length = 160 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 74/126 (58%), Gaps = 2/126 (1%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 ++ +++++IE NL ++++ IA + YS+ ++ +F N + + +YI++RRL AA Sbjct: 7 VIMEIIDYIEENLTENLNLDKIAYIANYSKYHLHRMFTNVVGCTIHQYIQRRRLTEAARQ 66 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQK 136 + T K ++DIA+++ + + QSF+ F+ L+ SP+ YR++D + I F++ + Sbjct: 67 LIFTDKYIIDIAITVGYSTHQSFTLAFRNLYKESPQVYRNKD--EFYPIQQRFVLNLNHQ 124 Query: 137 TECRLI 142 + Sbjct: 125 IQSEKC 130 >UniRef50_A8UPH5 Transcriptional regulator, AraC-type n=3 Tax=Flavobacteriales RepID=A8UPH5_9FLAO Length = 287 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 91/209 (43%), Gaps = 16/209 (7%) Query: 6 ELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYI 65 E + ++ Q+ L +++++I NL+ I I +A+ S +S + + R + P+G YI Sbjct: 3 EQSTSKNYYQQNLNRVIDFIHNNLDSKIDIALLAELSHFSPYHFHRITRALLGEPIGAYI 62 Query: 66 RKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANI 125 + R+ AA L+R + S+ IA + F++ S S+ FK FG SP +R++ Sbjct: 63 TRARIETAAKLLRYSENSIEQIAYKVGFETPSSLSKAFKNHFGISPSAHRNKK------- 115 Query: 126 FPSFLIRQQQKTECRLINFPETPIFG----NSFKYDIEVSNKSPDEEVKLRR---HHLAR 178 F+I++Q + + +N + I Y + + ++ D + A+ Sbjct: 116 --EFIIKKQNIMKTKELNIKKPKIVDLEDQKCLYYTMHGAYQTLDYGSAWEKLWGEVKAQ 173 Query: 179 CMKNFKTDIYFVSTFEPSTKSVDLLTVET 207 + + +P D + + Sbjct: 174 KLFTKGIKHIGLPYDDPKITEADKIRYDA 202 >UniRef50_C6CRD1 Transcriptional regulator, AraC family n=2 Tax=Firmicutes RepID=C6CRD1_PAESJ Length = 303 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 2/150 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + +E+IE NLEH I E IA+ + S Q +F + +PL EYIR+RRL Sbjct: 1 MDWLQRMNLAVEYIEDNLEHDIDYEQIARIALCSVYQFQRMFSFVLEIPLSEYIRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR--HRDYWDLANIFPSF 129 AA ++ + DIAL +++ +SFSR F+ L G +P R + Sbjct: 61 LAAFDLQDRKNKVTDIALKYGYETPESFSRAFQNLHGLTPTAARLAGSPLKAYPRLSFQI 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIE 159 +++ + R++ +FG Y ++ Sbjct: 121 ILKGVAEMNYRIVEREAFQVFGLEDIYGMD 150 >UniRef50_P96662 Uncharacterized HTH-type transcriptional regulator ydeE n=105 Tax=Firmicutes RepID=YDEE_BACSU Length = 290 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 2/162 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M K + + L++IE NL + I ++ A+ + S + + +F + L EYIR+RRL Sbjct: 1 MDLLKSMNRALKYIEENLTNDIDFQEAAKLAFCSEYHFKRMFSFLAGISLSEYIRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY--WDLANIFPSF 129 AA ++ + ++DIA+ ++S SF+R F+ L G +P + R + + Sbjct: 61 LAAFELKDSNVKVIDIAIKYGYNSPDSFARAFQNLHGINPSKARFNGHSLKAYPRMTFQL 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKL 171 I+ + R+ I G + I +P+ Sbjct: 121 TIKGGNEMNYRIEEKEAFRIVGIKKRVPIIFKGINPEIASMW 162 >UniRef50_B2TL55 Transcriptional regulator, AraC/XylS family n=2 Tax=Clostridium botulinum RepID=B2TL55_CLOBB Length = 282 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 70/146 (47%), Gaps = 3/146 (2%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + +E+IE N+ + IE +A+ + S + Q ++ V + EY+R+RRL Sbjct: 1 MDWLDSMNKAVEYIEDNITEKLDIEKVAKIALSSPFHFQRMYHVITGVTIVEYVRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR--HRDYWDLANIFPSF 129 AA + + + ++++A +++ ++F++ F++++G SP R + + Sbjct: 61 LAAQDII-SGEKIINVAYKYGYETPEAFTKAFRRMYGMSPSAAREPEANLKAYPKLSFHI 119 Query: 130 LIRQQQKTECRLINFPETPIFGNSFK 155 I+ + +++ + G + Sbjct: 120 SIKGDKDMNYKIVEKESFRVVGKQTR 145 >UniRef50_Q13QC7 Transcriptional regulator, AraC family n=5 Tax=Burkholderia RepID=Q13QC7_BURXL Length = 307 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 59/102 (57%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + ++++ ++I NL ++I ++A ++G S + +FR ++ + RL AA Sbjct: 205 RRIRRVTDYIRANLAGDLAISELAAQAGLSSFHFARVFRRETRETPHRFVTRLRLEEAAR 264 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 L+ T +++L IAL++ F++ FS +FK+ +G +P YR R Sbjct: 265 LLHATDQTVLQIALAVGFENASHFSVQFKRDYGVTPLAYRLR 306 >UniRef50_B7VRB4 Transcription activator n=6 Tax=Vibrionales RepID=B7VRB4_VIBSL Length = 290 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 1/128 (0%) Query: 22 LEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTA 81 + +I NL +S+ED+A +S +SR +Q +F+ + + Y+R+ +L +AA + Sbjct: 1 MAYIHANLSSALSLEDLATQSCWSRWQLQRVFQAETGLTVANYVRELKLSQAAEELLDGK 60 Query: 82 KSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKTECRL 141 ++DIAL L F+S+ SFSR FK++FG SP +YR + P + +E R Sbjct: 61 DRVIDIALGLGFNSEISFSRSFKQMFGVSPSQYRKAGKR-VGLKKPIQVSETASNSENRA 119 Query: 142 INFPETPI 149 ++F E I Sbjct: 120 LSFVEVRI 127 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 38/100 (38%), Positives = 57/100 (57%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 K ++ +L +I N + I+IEDIA YS+ F+ M V +Y+ RL AA Sbjct: 194 KKIKTILSYIANNFQENIAIEDIANYCFYSKSYFMKFFKETMGVSFIQYLNDYRLEIAAE 253 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L+ T ++LDIA + F++ F+R FKK +G SPR+YR Sbjct: 254 LLTTTTDNILDIAFATGFNNISYFNRCFKKKYGVSPRKYR 293 >UniRef50_Q2B3U5 Transcriptional regulator (AraC/XylS family) protein n=2 Tax=Bacillus RepID=Q2B3U5_9BACI Length = 297 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 23/218 (10%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 I+Q+ +E IE +L +S++ IAQ +G+S+ + +F+ + V + EYIR RR+ + Sbjct: 6 YSSIIQKSIEHIESSLHEDLSLDHIAQTAGFSKFHYHRIFQKEVGVTVSEYIRYRRIANS 65 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQ 133 A ++ T + +LDIAL F+SQ++F+R FKK + P +YR + LA + + Sbjct: 66 AHMLLYTDEKILDIALYFQFESQEAFTRSFKKYYHLPPGKYR-KLIGKLAEQKEEKNMDK 124 Query: 134 QQKTE---------------CRLINFPETPIFGNSFKYDIE-------VSNKSPDEEVKL 171 +QK + F + G +E + + + + Sbjct: 125 EQKPKGWVLSGSHPFNYQMGIDHETFHKGKSSGYLQSQTVEAPGEFATMMQEINAKNYRG 184 Query: 172 RRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFA 209 +R + +K+ D + S ++L + Sbjct: 185 KRLKFSGFLKSNNVDGFCSFWMRVDNASDEVLQFDNMG 222 >UniRef50_D0YX27 Hypothetical transcription regulator n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YX27_LISDA Length = 234 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 43/115 (37%), Positives = 62/115 (53%) Query: 4 DKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGE 63 + E+T++ R++ L+ L+ I+ NL P+ ED+A YS LF + M V L + Sbjct: 116 EDEITQDISEREEPLRPALKIIDENLSSPLREEDLAAACHYSPTYFSRLFHSVMGVTLKQ 175 Query: 64 YIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 YI K+RL A L+ + + IAL+ F FSR FKK GCSP E+R R Sbjct: 176 YIIKKRLDMACGLLSADKEKIAVIALTTGFKDVSYFSRVFKKHLGCSPGEFRTRK 230 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 60/114 (52%) Query: 2 RYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPL 61 R E E + + L+++L+ IE + P+++ D+A G S + F+ Sbjct: 255 RMCPEAPERDTPDMERLKRVLQRIEQDYAKPLTVPDMAAVCGCSSSHFMRWFKRMTGTSP 314 Query: 62 GEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 Y+ +RRL AA +R T +L IA + F++ +F+R+FKK +G +PR YR Sbjct: 315 LAYLNERRLAAAAENLRETDDKILVIAENAGFENLSNFNRQFKKRYGVTPRAYR 368 >UniRef50_A4BJ15 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Reinekea blandensis MED297 RepID=A4BJ15_9GAMM Length = 319 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 37/111 (33%), Positives = 56/111 (50%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 +EL+E Q L + LE +E N+E P++ +DIA SRR ++ LF+ M+ Y Sbjct: 199 RELSERTRAEQPKLAEALELMENNIEEPLTTDDIAFHVTISRRQLERLFKKHMNAVPSRY 258 Query: 65 IRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + RL A + S+ DI LS F S FS ++ +G +P E R Sbjct: 259 YLQIRLEEARRRLFKGNDSIADIGLSCGFSSGAHFSTAYRNQYGLTPSEDR 309 >UniRef50_D1NY75 Multiple antibiotic resistance protein MarA n=5 Tax=Enterobacteriaceae RepID=D1NY75_9ENTR Length = 123 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 2/106 (1%) Query: 13 IRQKILQQLLEWIECNLE--HPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 + + ++ +++ W+E L+ I I+ IA KSGYS+ ++Q +F+ LGEY+RKRRL Sbjct: 1 MSESVVNEIIRWLESQLQRNEGIKIDTIADKSGYSKWHLQRVFKELKGCTLGEYVRKRRL 60 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 AA +R +LDIAL F SQ +F+R FKK F +P ++R Sbjct: 61 LEAAKSLREGNLPILDIALQYGFSSQATFTRIFKKHFDTTPAKFRQ 106 >UniRef50_B8DRY5 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DRY5_DESVM Length = 436 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 60/108 (55%), Gaps = 1/108 (0%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 + + +++++I + +++++A + +S + +F + L +IR+ R+ RA Sbjct: 71 YEARINRVIDYIVADPARDFTLDELAGAAPFSPFHFHRIFAGLVGETLHAFIRRLRMDRA 130 Query: 74 AILVRL-TAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 A ++ A S+ D+A+ F S Q+F+R F++ F +P EYR R ++ Sbjct: 131 ANMLAFAPALSVTDVAMDCGFSSSQNFARAFRERFDMTPSEYRRRRHY 178 >UniRef50_Q1QYW4 Transcriptional regulator, AraC family with amidase-like domain n=20 Tax=Gammaproteobacteria RepID=Q1QYW4_CHRSD Length = 375 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 35/101 (34%), Positives = 60/101 (59%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q L +++ +E NLE PI+++++A+ SRR ++ LF+ ++ Y K RL RA Sbjct: 225 QPKLLEIVALMEANLEEPIALDELARYVDVSRRQLERLFQKYLSCSPSRYYLKLRLTRAR 284 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L+R T+ S+++IA F S FS+ +++ FG PR+ R Sbjct: 285 QLLRQTSMSIIEIASVCGFVSTPHFSKCYREYFGTPPRDER 325 >UniRef50_B9MLQ2 Two component transcriptional regulator, AraC family n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLQ2_ANATD Length = 519 Score = 141 bits (355), Expect = 3e-32, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 1/114 (0%) Query: 3 YDKELTENEMI-RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPL 61 + K T++E I + + +E+I N I++ I+ ++ LF+ + V Sbjct: 397 FSKAKTKHEQIINNDSINKAIEFINQNYSEEITLSQISSTFNFNPYYFSKLFKKYTGVSF 456 Query: 62 GEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 Y+ K R+ +A L++ T+KS+ +I+ ++ F F + FKK G +P +R Sbjct: 457 KTYLTKLRIQKACQLLKNTSKSIKEISFAVGFSDPNYFIKAFKKFTGMTPSAFR 510 >UniRef50_Q48G15 Transcriptional regulator ArgR n=24 Tax=Pseudomonadaceae RepID=Q48G15_PSE14 Length = 351 Score = 141 bits (355), Expect = 3e-32, Method: Composition-based stats. Identities = 33/109 (30%), Positives = 60/109 (55%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 L Q + +E N+E P++ ++IAQ SRR ++ +F+ +++ +Y + RL +A Sbjct: 232 HPKLTQAVLLMEANIEEPLTTDEIAQHVCVSRRQLERIFKQYLNRVPSQYYLELRLNKAR 291 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLA 123 ++ T+KS++ I LS F S FS ++ FG +PRE R++ Sbjct: 292 QMLMQTSKSIIQIGLSCGFSSGPHFSSAYRNFFGATPREDRNQRRSSSP 340 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 140 bits (354), Expect = 3e-32, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 63/123 (51%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 E T E ++ L+++L +I+ N ++IE+++ +S+ + F+ + + EY Sbjct: 152 HEGTHGEFGAEEKLKEVLSYIQSNYRETLTIEELSSVCHFSQTHFMNFFKRYAGMTCMEY 211 Query: 65 IRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLAN 124 I R+ RAA + T + ++DIA+ F + F++ FK+ FG +P YR +L+ Sbjct: 212 INHYRITRAAADLVETERQVMDIAMENGFRNISYFNKVFKERFGVTPGSYRKNSRENLSL 271 Query: 125 IFP 127 Sbjct: 272 PCK 274 >UniRef50_A7JZZ4 Putative uncharacterized protein n=3 Tax=Vibrio RepID=A7JZZ4_VIBSE Length = 310 Score = 140 bits (354), Expect = 3e-32, Method: Composition-based stats. Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 10/146 (6%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + +L++I NL+ +S+++I++ S +SR +Q +F+ V + YIR+ +L AA Sbjct: 12 NRIHSVLDYIHNNLDIALSVDEISKASCWSRWQLQRVFQQHTGVSVAHYIRELKLSLAAE 71 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQ 135 + T+ LDIA+ + F S+ +FSR FK +F SPR+YR L + +R Sbjct: 72 RLIHTSDRSLDIAIEMGFASEHAFSRAFKNMFSKSPRDYRKAQ--QLTGLRQPLTLRDTP 129 Query: 136 K--------TECRLINFPETPIFGNS 153 + E R+ P + G Sbjct: 130 EDENRHKCFIEVRIETKPAFVLAGYH 155 >UniRef50_Q12JT5 Transcriptional regulator, AraC family n=9 Tax=Gammaproteobacteria RepID=Q12JT5_SHEDO Length = 289 Score = 140 bits (354), Expect = 3e-32, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 88/204 (43%), Gaps = 6/204 (2%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 + ++++ +I +L+ +++ ++Q SR + LF + L YI RL RA Sbjct: 9 QLNRVKEVCSYIGQHLDEELNLTHLSQVGLLSRFHFHRLFLAATGMQLNRYILLLRLKRA 68 Query: 74 AILVR-LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFL-- 130 + + + + +LDI + FDS ++FSR FK+ F SP ++R W + + + Sbjct: 69 SFRLAFESKRKILDIGIEAGFDSAEAFSRAFKRTFQQSPSQFRSNPDWPHWHSVMTLVNP 128 Query: 131 IRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFV 190 + + +LI P + E ++ + ++ R+ + Y V Sbjct: 129 PQGDIIVDVKLIELPIQKVAQLEHSGAPEKLMETAKQFIEWRK--TTGLSPVAISRTYGV 186 Query: 191 STFEPSTKSVDLLTVETFAGTVCE 214 +P+T + + F G+V E Sbjct: 187 PNGDPNTMAAEDFRFR-FCGSVNE 209 >UniRef50_C6LLK3 Putative two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLK3_9FIRM Length = 531 Score = 140 bits (354), Expect = 3e-32, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 55/111 (49%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 +NE + ++++ +++ N IS++D++++ S +F+ EY+ Sbjct: 420 KNEDRSESLVEKARSYMQENYSREISLDDVSKEVNVSPYYFSKIFKEESGENFTEYLTNI 479 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 R+ +A L+ S+ +I + + FSR FKK G +PREYR R Y Sbjct: 480 RIGKAKELLENPELSIKEIGVMSGYTDPNYFSRIFKKHTGITPREYRERYY 530 >UniRef50_C0D9U5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9U5_9CLOT Length = 142 Score = 140 bits (354), Expect = 3e-32, Method: Composition-based stats. Identities = 37/107 (34%), Positives = 62/107 (57%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 ++ I++Q++ +IE NLE + +E IA +GYSR ++ +F + +Y++ RRL A Sbjct: 4 QRDIVRQVITYIESNLEGDLDLEKIAASAGYSRFHLNRIFAGETGCTIYKYLQARRLTSA 63 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 A + T + IA + SQQ+FS FK+ + CSP+ YR R + Sbjct: 64 AEKLAKTHTPIAQIACESGYSSQQAFSLAFKRAYLCSPKVYRDRGIF 110 >UniRef50_Q8YSB8 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YSB8_ANASP Length = 306 Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 54/112 (48%) Query: 6 ELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYI 65 + ++ + L+Q + +I NL+ +++ DI+ G S F+ +Y+ Sbjct: 192 DDHHHKGLSHWKLRQAISYIHENLDQDLTLVDISTAVGMSMYYFSRQFKQSTGFAPHQYV 251 Query: 66 RKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 R+ RA L+ T K++ I + F SQ F+ F+KL G +PR YR + Sbjct: 252 MNCRIERAKKLLGSTNKTIEQICTQVGFQSQSHFTNVFRKLMGITPRVYREQ 303 >UniRef50_A6UK12 Helix-turn-helix-domain containing protein AraC type n=3 Tax=Rhizobiaceae RepID=A6UK12_SINMW Length = 331 Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 53/99 (53%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L++ + ++E +L P ++ +++ G S + LF+ + Y ++R+ RA +L+ Sbjct: 232 LRRAVAYLEEHLAEPFNLAKLSEAVGMSEFHFSRLFKKATGLSPSRYFIRQRVARAQLLL 291 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 + T S++ I +S+ + S F++ F++ G P YR Sbjct: 292 QETDTSIIKIGMSVGYSSPSHFAQVFRRETGLPPSHYRR 330 >UniRef50_C7IEN8 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IEN8_9CLOT Length = 279 Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 2/150 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + L +++IE +L I +DIAQ + YS + Q F + + EY+R RRL Sbjct: 1 MDWVRSLNYAIDYIEVHLSENIVCDDIAQSAFYSSFHFQRTFSLLTGMTVSEYVRNRRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR--DYWDLANIFPSF 129 AA + ++D+AL +D+ +SF++ F++ G P + + + + Sbjct: 61 LAAQELLNYDSKVIDVALKYGYDTPESFAKAFRRFHGVLPSQAKKHGTELKAFNRLTLKI 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIE 159 ++ + ++ + + K+ E Sbjct: 121 VLEGGSVMDYKIEKKDSFRVVTKTRKFTEE 150 >UniRef50_Q18AY3 AraC-family transcriptional regulator n=15 Tax=Bacteria RepID=Q18AY3_CLOD6 Length = 288 Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 2/143 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M L Q + +IE NLE + + A+ + S + Q +F VPL EYIR+RR+ Sbjct: 1 MEWINKLNQAITYIEENLESGVDYAEAAKIACCSTFHFQRMFSYIAEVPLSEYIRRRRMT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD--YWDLANIFPSF 129 +AA ++ + +L+++ +DS SF+R F+ + SP R + + S Sbjct: 61 KAAFELQNSNIKILELSEKYGYDSPTSFNRAFQNIHNISPSAARAKGVVLKAYPKMTLSI 120 Query: 130 LIRQQQKTECRLINFPETPIFGN 152 ++ + + R++ I G Sbjct: 121 YVKGNIEMQYRIVEKKGFRIVGI 143 >UniRef50_A6LX85 Transcription activator, effector binding n=2 Tax=Bacteria RepID=A6LX85_CLOB8 Length = 297 Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 72/165 (43%), Gaps = 2/165 (1%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 K LQ ++++E +L I+ E++A++ S N +F + EYIR R+L A Sbjct: 5 KSLQSAIDYMESHLLEKINYENVAKEVHMSCYNFHRIFSLMAGITANEYIRNRKLSLAGQ 64 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW--DLANIFPSFLIRQ 133 ++LT ++D+A +++ +SF++ F + G SP+ + + + ++ Sbjct: 65 ELQLTDSKIIDVAFKYGYETPESFAKAFSRFHGVSPKLAKRKGTQLCLFNPLAIKIILEG 124 Query: 134 QQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLAR 178 R+ + + E+ N++ + ++ + Sbjct: 125 GNTMNYRIEETGKQRFIAKVRAFSNEIMNEAGNHDIPDFWGECHK 169 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 67/113 (59%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 K+ T++ + + ++QL+++I + ++I+ ++Q GYS+ + +F+ E+ Sbjct: 178 KKNTDDTYRKNEKIRQLIDYINNHYSDNLTIDFLSQFIGYSKTHFMTVFKQHTGTSCTEF 237 Query: 65 IRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + + RL +A L+ + + +L+IA + F++ +F+R+FK+ + +P +YR + Sbjct: 238 VIQVRLSKACELLIHSTRPILEIANEIGFNNLSNFNRQFKRYYNLTPSQYRKK 290 >UniRef50_UPI0001787EAC transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787EAC Length = 447 Score = 140 bits (353), Expect = 5e-32, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 12/188 (6%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M +I+Q+ ++++E +L P+++E+IA + S N+ LF + P+ EYIRKRR+ Sbjct: 1 MQTGEIVQRAIDFVEDHLTEPLALEEIAGVAAMSLPNLYRLFHSITGHPVKEYIRKRRIS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH--------RDYWDLA 123 AA +R T +DI F+S +F + FK+ G +P YR R + Sbjct: 61 EAASCLRNTDLPTIDIGYRCGFESYPAFMKTFKRCTGLTPGAYRKARLVYSFERMNLNER 120 Query: 124 NIFPSFLIRQQQKTECRLINFPETPIFGNSF--KYDIEVSNKSPDEEVKL--RRHHLARC 179 F ++ E R+ G F +++ + + D L H Sbjct: 121 ITFMGERDASERFPEVRITRLLPRKGIGCLFAAEHEKGIETAAIDYFRTLMSSHHIDIHE 180 Query: 180 MKNFKTDI 187 ++ F ++ Sbjct: 181 LRLFGWNV 188 >UniRef50_A8LK68 HTH-type transcriptional regulator n=43 Tax=Rhodobacterales RepID=A8LK68_DINSH Length = 339 Score = 140 bits (353), Expect = 5e-32, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 2/105 (1%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 +R L ++++ +E N+E PIS +A G S R ++ LFR +++ Y + RL + Sbjct: 228 VRHPRLSKVIQMMEANIEEPISPSVLASDIGMSTRQLERLFRRYLNRSPKRYYMELRLQK 287 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 A L+ T S++++AL+ F S FS+ ++ + +P YR R Sbjct: 288 ARNLLMQTDMSVINVALACGFTSPSHFSKCYRSQYNTTP--YRER 330 >UniRef50_A3ZMZ0 Transcriptional regulator, AraC family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMZ0_9PLAN Length = 286 Score = 140 bits (353), Expect = 5e-32, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 93/231 (40%), Gaps = 13/231 (5%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 M ++ E +++R ++L I+ +L+ +S+E +A + YS + +FR + Sbjct: 1 MNATRQRYEAKILRVQLL------IQHHLDEDLSLEHLAAAADYSPCHFHRIFRGIVGES 54 Query: 61 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 +Y+R+ R+ RAA +R +S+LDIAL + S ++F+R F + FG +P +Y+ ++ Sbjct: 55 ADDYVRRLRMERAAQSLRYRRRSVLDIALDAGYGSHEAFTRAFVRTFGVTPSDYQSLEHP 114 Query: 121 DLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM 180 + RL P + + N +P ++ + + Sbjct: 115 PASIKETLMSTVNYTAAHVRLETQPSRRLAYIRVVGKYDFENLNPA-FGRILQFAAENNL 173 Query: 181 KNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKE----WTTTRG 227 T V +P + + + G + P T G Sbjct: 174 MTDCTACVGVYHDDPDVTAPEKQRAD--VGVTVDDQFQPTGEIQVQTIPSG 222 >UniRef50_B4WTP1 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WTP1_9SYNE Length = 294 Score = 140 bits (353), Expect = 5e-32, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 60/106 (56%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 + + L++++++IE NL +SI D+A + S+ F+ + + +Y+ ++R+ Sbjct: 188 SGLSRSQLKRVIDYIEANLAQDLSIFDLASLTNMSKSYFSRSFKQSVGISPYQYVIQQRV 247 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 RA L++ + S+ DIAL F +Q ++ F+++ G +P+ Y+ Sbjct: 248 ERAKQLLKQQSISISDIALDCGFANQTHLTKAFRQMTGTTPKAYQK 293 >UniRef50_A6EIJ9 Transcriptional regulator, AraC family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIJ9_9SPHI Length = 309 Score = 140 bits (352), Expect = 5e-32, Method: Composition-based stats. Identities = 40/129 (31%), Positives = 71/129 (55%), Gaps = 1/129 (0%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 E K L ++L+++E +LE +S+E IA + YS + +FR+ ++ L YI ++R Sbjct: 7 GEKDHIKRLNKVLQFVEDHLEEELSLEKIAAIACYSPFHFHRIFRSVVNESLNVYIVRKR 66 Query: 70 LCRAA-ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPS 128 + +AA IL+R S+ ++++ F+ SFSR FKK +G SP ++R + + I Sbjct: 67 IEKAASILIRKPGISITELSVMYGFNGNTSFSRAFKKYYGMSPSDFRAQAPGRHSKICIE 126 Query: 129 FLIRQQQKT 137 + KT Sbjct: 127 ERKNGKGKT 135 >UniRef50_Q49JG3 LdaA n=9 Tax=Enterobacteriaceae RepID=Q49JG3_ECOLX Length = 309 Score = 140 bits (352), Expect = 5e-32, Method: Composition-based stats. Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 6/218 (2%) Query: 13 IRQKILQQLLEWIECNLE-HPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 +++ + +L++IE N+E PI I + + SGYSRR +QLLF +++ +P+G+YI++RR+ Sbjct: 3 LKKMTINAILDYIEDNIEISPIDINSLVEYSGYSRRYLQLLFFDYIGMPVGKYIQRRRVS 62 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 RAA+L+RLT ++ I+ L +DSQQ+F+REFKK G +P +YR W N Sbjct: 63 RAAVLLRLTNLPLVTISEKLCYDSQQTFTREFKKHTGNTPLQYRKDKIWTFKN-QTGHRH 121 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVS 191 L FG + ++ E + + + + ++ + Sbjct: 122 LDTLFPVPELRRLENKDFFGTPVCFKEKIP--YTAENSQQKWNMVKSLFSRSDEPLFVSN 179 Query: 192 TFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLY 229 K D + + E++ + + GL+ Sbjct: 180 AISKENKLNDNFIINSIFWAKKEHSSIEGK--IDEGLF 215 >UniRef50_D0Y1I0 Transcriptional regulator, AraC family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y1I0_9CAUL Length = 301 Score = 140 bits (352), Expect = 5e-32, Method: Composition-based stats. Identities = 36/102 (35%), Positives = 54/102 (52%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 + + LQ++L++IE N+E + IED+A + S + F+ M VP Y+ RR+ R Sbjct: 196 LDPRRLQRVLDFIEDNIEAALGIEDLAAIACLSPFHFARAFKVAMGVPPHRYVAGRRMSR 255 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY 114 A L+ A + +IA F S SF R FK+ G SP Y Sbjct: 256 AKSLLAGGAVPVAEIAYRCGFSSVSSFGRAFKRASGVSPAAY 297 >UniRef50_B2IKR9 Transcriptional regulator, AraC family n=4 Tax=Rhizobiales RepID=B2IKR9_BEII9 Length = 292 Score = 140 bits (352), Expect = 5e-32, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 58/103 (56%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 + + L+++L++IE L I+++D+A ++ S + LF++ + Y+ RR+ Sbjct: 185 LDPRRLKRVLDFIEARLATDIALDDLAAEACLSPFHFSRLFKDATGLSPHRYVTDRRVQA 244 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 A + L S+++IAL F SQ +F R F+K G +P +YR Sbjct: 245 ARDKLALRHSSLIEIALDTGFGSQANFIRVFRKATGLTPGQYR 287 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 140 bits (352), Expect = 6e-32, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 55/113 (48%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 ++ E + L+ +L+W+ + P+ + D A +S + FR + Sbjct: 173 RQCLSTETADTQRLKTVLQWLSAHYAEPLRVADAAGVCSFSASHFMRWFRQMTGQSFIAF 232 Query: 65 IRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + + RL AA +R T +++L IA F++ F+R FK FG +PR+YR + Sbjct: 233 LNEYRLNTAAEALRTTDETVLTIASRCGFENLSYFNRAFKAHFGMTPRDYRKK 285 >UniRef50_Q72FD7 Transcriptional regulator, AraC family n=3 Tax=Desulfovibrio vulgaris RepID=Q72FD7_DESVH Length = 326 Score = 140 bits (352), Expect = 6e-32, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 1/122 (0%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 + + + +L++ I NL P+++E++A S +S ++ +F M L +IR+ Sbjct: 4 ADTLHRYESRVNRLIDHIVNNLSGPLTLEEMAAVSSFSPFHLHRIFSTVMGETLAAFIRR 63 Query: 68 RRLCRAAILVR-LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIF 126 R+ RAA+L+ +S+ DIA + F S Q+ +R F + G P YR + + Sbjct: 64 VRIERAAVLLLWNPTRSVTDIAFACGFSSSQNLARAFTRHMGMPPGVYRRCRREEGCGLT 123 Query: 127 PS 128 P+ Sbjct: 124 PA 125 >UniRef50_C1D8X9 Putative uncharacterized protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D8X9_LARHH Length = 338 Score = 139 bits (351), Expect = 7e-32, Method: Composition-based stats. Identities = 38/103 (36%), Positives = 60/103 (58%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q L + + +E N+E P+S +DIA G SRR ++ LF+ +++ Y + RL RA Sbjct: 226 QPKLTEAVSLMEANIEEPLSTDDIAFYVGVSRRQLERLFKQYLNTVPSRYYLELRLNRAR 285 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 L++ T+KS++ I LS F S FS ++ FG +PRE R + Sbjct: 286 QLLQQTSKSIVQIGLSCGFSSGPHFSSTYRNHFGITPREERAQ 328 >UniRef50_B9YCD3 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B9YCD3_9FIRM Length = 310 Score = 139 bits (351), Expect = 7e-32, Method: Composition-based stats. Identities = 37/128 (28%), Positives = 70/128 (54%), Gaps = 3/128 (2%) Query: 9 ENEMIRQKILQQLLEWIECNL-EHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 E+ ++ + + +++IE +L + + + + GYS+ + LF VP+ YI++ Sbjct: 17 ESMNDNREQISRAVDYIEEHLQDETLDLNAVTAAVGYSKYHWHRLFTALTGVPVHRYIQR 76 Query: 68 RRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFP 127 RR+ AA + TA +L IAL + +Q+SFSR+F+ ++ CSP+ YR R + + P Sbjct: 77 RRMSEAARRLVFTADPILRIALDSGYQTQRSFSRQFQAVYHCSPKRYRRRKLY--LPLQP 134 Query: 128 SFLIRQQQ 135 ++ Q Sbjct: 135 RLELQNSQ 142 >UniRef50_B9QW22 DJ-1/PfpI family n=2 Tax=Labrenzia RepID=B9QW22_9RHOB Length = 327 Score = 139 bits (351), Expect = 7e-32, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 59/116 (50%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 ++ I + + ++ ++E P+S + +A S R ++ LFR + G+Y Sbjct: 192 HDIEARTGISNAKILDAIRIMDLHIEDPLSCQQLAMTVNLSPRQLERLFRRHFNCTPGQY 251 Query: 65 IRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 + RL A L+R T++ +LD+AL+ F S F++ +++ F C+P E R W Sbjct: 252 YLRLRLETARDLLRRTSRPVLDVALACGFASTSHFTKCYRERFLCTPTEERQSYQW 307 >UniRef50_Q52620 Regulatory protein pqrA n=6 Tax=Enterobacteriaceae RepID=PQRA_PROVU Length = 122 Score = 139 bits (350), Expect = 8e-32, Method: Composition-based stats. Identities = 44/104 (42%), Positives = 67/104 (64%), Gaps = 2/104 (1%) Query: 15 QKILQQLLEWIECNLE--HPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 + ++ +L+W+E L+ I I+ IA KSGYS+ ++Q +F++F LGEY+RKRRL Sbjct: 3 ENVVNDILKWLETQLQRNEGIKIDTIANKSGYSKWHLQRIFKDFKGCTLGEYVRKRRLLE 62 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 AA ++ S+LDIAL F SQ +F+R FKK F +P ++R Sbjct: 63 AAKSLQEKDMSILDIALMYGFSSQATFTRIFKKHFNTTPAKFRE 106 >UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=Clostridiales RepID=C6JEP4_9FIRM Length = 531 Score = 139 bits (350), Expect = 8e-32, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 49/101 (48%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 I+ + E+I N IS++D++++ S LF+ EY+ + RL A L Sbjct: 429 IIDRAKEYINENFRRDISLDDVSREVDISPYYFSKLFKQETGKNFIEYLTEIRLKNAREL 488 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 ++ + S+ +I + FSR FKK G +P E+R R Sbjct: 489 LQDSRLSIKEICAQSGYSDPNYFSRIFKKYEGVTPSEFRER 529 >UniRef50_B8FUU7 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FUU7_DESHD Length = 129 Score = 139 bits (350), Expect = 9e-32, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 61/105 (58%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + L++IE NL+ I +ED+AQK+ S+ LF + YI +RR+ Sbjct: 1 MDYRAKVYDSLDYIEENLDDRIDLEDLAQKAYLSKYYYHRLFHKVTGESVTRYITRRRMA 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 +AA + T + ++DIAL + SQ+SF+R F +++G +P +YR Sbjct: 61 KAAEELVETEQPIIDIALKYQYASQESFTRAFMRIYGLAPGKYRK 105 >UniRef50_A8GD44 Transcriptional regulator, AraC family n=9 Tax=Enterobacteriaceae RepID=A8GD44_SERP5 Length = 118 Score = 139 bits (350), Expect = 9e-32, Method: Composition-based stats. Identities = 39/105 (37%), Positives = 67/105 (63%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + L+EWI+ NLE + I +A ++GYS+ ++Q +F+ LGEYIR ++L Sbjct: 1 MNSTGFITDLIEWIDNNLEEKLDINTVAGRAGYSKWHLQRMFKRQTGYALGEYIRMQKLR 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 +A + + + ++ +A+SL FDSQQSF+R FK+ +G +P ++R Sbjct: 61 VSAERLANSGEPIVSVAISLGFDSQQSFNRSFKRHYGQTPGDWRR 105 >UniRef50_B7K731 Transcriptional regulator, AraC family n=2 Tax=Cyanobacteria RepID=B7K731_CYAP7 Length = 309 Score = 139 bits (350), Expect = 9e-32, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 58/95 (61%) Query: 21 LLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLT 80 + ++I NL I + ++++ G S+ + LF+ + + +Y+ ++R+ RA +L++ + Sbjct: 209 ITDYINDNLAGEIKLSNLSELIGISQFHFSRLFKQTVGISPHQYLMRQRIERAKLLLKNS 268 Query: 81 AKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 S++++ALS F S F + F+++ G +P+EYR Sbjct: 269 PLSVVEVALSCGFSSHSHFGKYFRQITGLTPKEYR 303 Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYS-RRNIQLLFRNFMHVPLGEYI 65 ++ ++ + ++ +++ ++ P+S+ ++A G+S + FR + EY Sbjct: 247 ISPHQYLMRQRIERAKLLLKN---SPLSVVEVALSCGFSSHSHFGKYFRQITGLTPKEYR 303 Query: 66 RKRR 69 RR Sbjct: 304 VNRR 307 >UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7G8V4_9FIRM Length = 310 Score = 139 bits (350), Expect = 9e-32, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 60/113 (53%) Query: 3 YDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLG 62 + + + + ++L++I+ + +++++IA SG+S+ + LF+ + Sbjct: 189 FPNTRSHKQKEYLQKFNEVLDYIDSHYTEELTLDNIADFSGFSKYHFTRLFKQYTDSTFY 248 Query: 63 EYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +Y+ RR+ A L+ S+ +IAL F S +F+R FK+ GC+P EYR Sbjct: 249 DYLIYRRIKAAEELLANPELSITEIALQSGFSSISTFNRIFKQKKGCTPSEYR 301 >UniRef50_B0SZN8 Transcriptional regulator, AraC family n=11 Tax=Proteobacteria RepID=B0SZN8_CAUSK Length = 296 Score = 139 bits (350), Expect = 9e-32, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 72/169 (42%), Gaps = 9/169 (5%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 +Q++L+ I+ +L+ + +E ++ + +S+ + F+ V L Y++ RL RA Sbjct: 11 YHARMQRVLDHIDRHLDGDLDLEAMSSVAAFSKFHFHRQFKATFGVSLHRYVQLARLRRA 70 Query: 74 AILVRLTA-KSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLA-NIFPSFLI 131 + + +S+ DIAL +++ +F+R F++ F SP +R W+ F Sbjct: 71 SKRLADGQGQSVTDIALDAGYETPDAFARAFRQRFAQSPSRFRKSPDWEPWLAAFGPLNA 130 Query: 132 RQQQKTECRLI-------NFPETPIFGNSFKYDIEVSNKSPDEEVKLRR 173 + + + T + + D E + + + R+ Sbjct: 131 ARSKIMQTTFTPDQVALREVAPTRVAIFEHRGDPETLDATIQRFIAWRK 179 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 139 bits (350), Expect = 9e-32, Method: Composition-based stats. Identities = 31/99 (31%), Positives = 56/99 (56%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + + +++I+ N H IS++DIA+ G SR ++ +F + +Y+ R+ A Sbjct: 173 QYVLSAIKYIQFNYSHDISVDDIAKAVGVSRSHLYRVFMANVGQSPIDYLTNYRISEACS 232 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY 114 L++ + S+ +IA+S+ F Q FSR FKK+ G P +Y Sbjct: 233 LLKNSNLSIAEIAVSVGFFDQFYFSRVFKKVKGVPPSKY 271 >UniRef50_UPI0001AF3354 AraC family transcriptional regulator n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF3354 Length = 298 Score = 139 bits (350), Expect = 9e-32, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 52/98 (53%) Query: 19 QQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVR 78 + L+++IE +L P+S+ +A S + +FR +P +Y+ RR+ A L+R Sbjct: 190 RHLVDFIEMHLADPLSLGQLAGMCALSEYHFARMFRESFGLPPHQYLLARRIELARQLLR 249 Query: 79 LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 T + +IAL+ F S FS F++ G +P EYR Sbjct: 250 HTVIPLGEIALACGFASASHFSNRFRQTVGATPGEYRQ 287 >UniRef50_B0KTA0 Transcriptional regulator, AraC family n=2 Tax=Pseudomonas putida RepID=B0KTA0_PSEPG Length = 351 Score = 139 bits (350), Expect = 9e-32, Method: Composition-based stats. Identities = 38/102 (37%), Positives = 63/102 (61%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 K ++ LE + N+E PI I++IA+ +G SRR+++ LFR + Y + RL A Sbjct: 237 KGVRLALELMHANIEDPIGIDEIAEHAGLSRRHLERLFRRHVQATPPRYYLELRLTHARQ 296 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 L++ T+KS+ ++A++ F S F R F++LF +PR+YR R Sbjct: 297 LLQHTSKSLTEVAVASGFISFPHFYRRFRELFAVAPRQYRAR 338 >UniRef50_A6FWZ8 Transcriptional regulator, AraC family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FWZ8_9DELT Length = 318 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 5/106 (4%) Query: 15 QKILQQLLEWIECNLE----HPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 + + + +E+I NLE ++++D+AQ +G S+ + F + + G Y+R RL Sbjct: 210 HRKIARSVEYI-RNLEVEGPSNVTLDDLAQVAGLSKYHFLRQFSQVVGMTPGAYLRTLRL 268 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 C AA +R T +L++ALS+ F SFSR F + G +P EY+ Sbjct: 269 CHAARKLRTTDLPILEVALSVGFADHPSFSRAFARHMGMTPSEYQK 314 >UniRef50_A8GHJ0 Transcriptional regulator, AraC family n=1 Tax=Serratia proteamaculans 568 RepID=A8GHJ0_SERP5 Length = 140 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 48/112 (42%), Positives = 69/112 (61%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + ++L+WIE NL ++I+ IA+KSGYSR +IQ LF+ + L +YIR RR+ AAI + Sbjct: 9 INEMLKWIEGNLGAELNIKTIAKKSGYSRFHIQRLFKLHAGLTLAQYIRMRRVTEAAIAL 68 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSF 129 R T + ++DIAL FDSQQ F+R FKK +P E R + + S Sbjct: 69 RFTDRKIMDIALDYGFDSQQVFTRTFKKQLKTTPGELRRSKQLNNNRLCYSL 120 >UniRef50_A6VYP8 Transcriptional regulator, AraC family n=7 Tax=Gammaproteobacteria RepID=A6VYP8_MARMS Length = 368 Score = 138 bits (349), Expect = 1e-31, Method: Composition-based stats. Identities = 32/101 (31%), Positives = 56/101 (55%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 L ++E +E NLE PI ++++A SRR I+ +F + + + RL RA Sbjct: 224 PKLVDVIELMENNLEEPIELDELATFVDVSRRQIERMFHRHLECSPSRFYLRLRLERARK 283 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 L++ + S+++I+++ F S FSR ++K G SPR+ R Sbjct: 284 LLKQSNMSIVEISMACGFISTPHFSRCYRKHIGVSPRDERK 324 >UniRef50_A4B8V7 Transcriptional regulator, AraC family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4B8V7_9GAMM Length = 164 Score = 138 bits (349), Expect = 1e-31, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 62/112 (55%) Query: 4 DKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGE 63 ++E ++ +I +L+ +L++I+ +L + + +A +G S+ N +F + + Sbjct: 39 NQEEVDSTVINYPVLEHILQYIDVHLSGALDVPKLAGIAGLSQANFTRIFSRHVGSSPAD 98 Query: 64 YIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 YI ++RL RA L+ + S+ I+LS F FS+ FK++F SP E+R Sbjct: 99 YILQKRLERATKLLSDSQLSVNHISLSCGFKDANYFSKVFKRIFSISPVEFR 150 >UniRef50_B9Z4B5 Transcriptional regulator, AraC family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4B5_9NEIS Length = 323 Score = 138 bits (349), Expect = 1e-31, Method: Composition-based stats. Identities = 38/102 (37%), Positives = 60/102 (58%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 RQ L + + +E N+E P++ ++IAQ +G SRR ++ +F+ + VP Y + RL RA Sbjct: 211 RQPKLTEAVMLMEANIEEPLTTDEIAQFTGQSRRQLERMFKQHLDVPPSRYYLQLRLERA 270 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 ++R T KS++ I L F S FS ++ FG +PRE R Sbjct: 271 RAMLRNTGKSVVQIGLLCGFSSGPHFSTVYRSHFGIAPREER 312 >UniRef50_C6CRZ9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRZ9_PAESJ Length = 501 Score = 138 bits (349), Expect = 1e-31, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 1/102 (0%) Query: 18 LQQLLEWIECN-LEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 +QQ +++IE + L+ +SI+ +A+ + + LF+ Y+ K +L +A +L Sbjct: 400 IQQAIDYIEEHYLDSDLSIKQVAENIHLNPSYLSTLFKKETGETFTGYVNKLKLQKAQVL 459 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 +R T + +I ++ F+ FS FKK F SP E+R Sbjct: 460 LRNTDMKISEICQTVGFEDSTYFSSVFKKHFQISPSEFRQNH 501 >UniRef50_B9JE85 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JE85_AGRRK Length = 296 Score = 138 bits (349), Expect = 1e-31, Method: Composition-based stats. Identities = 35/99 (35%), Positives = 61/99 (61%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 +L++L+E IE +LE P+SI D+A+++ S ++ FR +P Y+ +RRL RAA L Sbjct: 193 VLRRLMEMIEASLERPVSIADLAREADLSDHHMSRAFRLSTGLPPHAYMIRRRLERAAEL 252 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +R ++ S+ ++A + + FS F+ G +PR+YR Sbjct: 253 LRFSSASITEVAYMCGYSNPSHFSTAFRGEMGIAPRQYR 291 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 138 bits (349), Expect = 1e-31, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 54/107 (50%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 +M R + L++++ +I+ + PI + ++A S F++ +Y+ R+ Sbjct: 185 DMTRTERLKKVILYIQSHYHRPIRLSELADLIPMSEGQFCRFFKSMTGQTPVDYMNSYRV 244 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 +AA L+R + DIAL + F F R F+K+ C+P EYR + Sbjct: 245 RQAAELLRSPDNKISDIALDVGFGHISYFVRVFRKIMNCTPSEYRKK 291 >UniRef50_Q64RP2 AraC-type transcriptional regulator n=6 Tax=Bacteroidales RepID=Q64RP2_BACFR Length = 280 Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 97/226 (42%), Gaps = 10/226 (4%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 ++ E + + +++++I +L P+ +E +A++ S + + R ++H PL YI + Sbjct: 3 SDTEEKYLQQVNRVIDYINSHLNEPLRVETLAREVCLSEYHFHRIMRAYLHEPLATYIAR 62 Query: 68 RRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFP 127 +R+ RA + +++ + +A + +++ QS S+ FK+ FG SP YR R A + Sbjct: 63 QRVERAVMYLQMKNIRLAQVAEMVGYETPQSLSKAFKQFFGISPTAYRKRR----AERYE 118 Query: 128 SFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDI 187 F +++ + ++ PE + + KLR + T Sbjct: 119 EFSTLKKESLKPEILTEPELKLVYIRIIGRYGEEEPYIEAWRKLRDFLQINGLLTPSTRW 178 Query: 188 YFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEW----TTTRGLY 229 +S +P+ + +A E+ P+ T +G Y Sbjct: 179 IGISFDDPTVTKTEQCRF--YACATVEHDVSPQGAFGMKTIPQGRY 222 >UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJL7_CALS8 Length = 291 Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats. Identities = 34/118 (28%), Positives = 64/118 (54%), Gaps = 3/118 (2%) Query: 5 KELTENEMIRQKI---LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPL 61 K + ++EMIR +++++E+I+ + I+++D+A+ S + LF+ + + Sbjct: 163 KYILDSEMIRISSLSSIEKIIEYIKNHYMEDITLDDLAKMVYLSPTYLSYLFKKQLGITF 222 Query: 62 GEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 EY+ RL ++ L+ T S+ +I+ + + Q FSR FKK FG SP Y+ Y Sbjct: 223 KEYLINIRLKKSKELIETTDLSIGEISKMVGIEDQNYFSRLFKKKFGVSPLNYKKDKY 280 >UniRef50_A8TTK0 Transcriptional regulator, AraC family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTK0_9PROT Length = 330 Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats. Identities = 52/234 (22%), Positives = 99/234 (42%), Gaps = 16/234 (6%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 + L ++L I+ NL+ +S++++A + +SR + +FR +GE++R+ +L RA Sbjct: 38 YESRLLRVLVHIQRNLDRAMSLDELADVAAFSRFHFARIFRAMTGETVGEHVRRLKLERA 97 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR------------HRDYWD 121 A +R T +++ +IAL FD+ ++FSR FK FG P +R ++D Sbjct: 98 AGKLRHTRQTVTEIALDAGFDTPEAFSRTFKAQFGDPPSRFRVLRGSFRPPRSPSGVHYD 157 Query: 122 LANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMK 181 + F Q ++ E P + +F + N ++ R + Sbjct: 158 QDGVLRGFTPYQGADPMTLDVSTREFPTYPFAFLRHVGRYNDIGPVFRRVAAIADERRLF 217 Query: 182 NFKTDIYFVSTFEPSTKSVDLLTVE---TFAGTVCEYADMPKEWTTTRGLYDPT 232 T + V+ +PS L + + + ++ K GLY T Sbjct: 218 GPDTKVMMVAYDDPSVTDEQRLRSDAGVSLTDPTVDTGELIKG-EIAGGLYAVT 270 >UniRef50_B5EUU0 Transcriptional regulator, AraC family n=3 Tax=Aliivibrio RepID=B5EUU0_VIBFM Length = 299 Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats. Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 38/237 (16%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 ++ +L +I N++ P+++E +A+ S +SR +Q +F+N+ + + +Y+R++RL +A+ Sbjct: 12 NRIENILVFIHQNIDKPLTVEILAEMSCWSRWQLQRVFQNYTGMNVAQYVREQRLSMSAL 71 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQ 135 V K MLDIA S F S+ +FSR FK+ F SPREY+ + I FL + Sbjct: 72 EVLDKKKRMLDIAYSYGFTSEIAFSRAFKQYFHKSPREYQKQAKK--IGIQKPFLKQVNV 129 Query: 136 KT-------ECRLINFPETPIFGNSFKYDIEVSNKSP-DEEVKLRRHHLAR---CMKNFK 184 RL P + G S + +S+ +E+V + L + + Sbjct: 130 DPLLNSHFYRVRLEYKPSFKVLGLSTRLQGILSDTPDFNEKVPSVWNALDTSIVYLPSIP 189 Query: 185 TDIY----------------------FVSTFEPSTKSVDLLTVETFAGTVCEYADMP 219 Y +ST E + DL + EYA +P Sbjct: 190 EQKYAVIDTREENADSLLYWAGINCEALSTDELNQHKADLQIITI---PEQEYAVLP 243 >UniRef50_A4Z280 Putative transcriptional regulator, AraC family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4Z280_BRASO Length = 304 Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 61/115 (53%) Query: 3 YDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLG 62 + K L N I + L+QL+++ + L +S+ D+A S ++ LFR + Sbjct: 187 FAKPLRGNPRIEDRRLRQLVDYFDSRLGESLSVADLAAFLDLSVPHLTELFRRGLGSSPY 246 Query: 63 EYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 ++ +RR+ RA L+ S+ DIAL+L F S Q F+ F+K G +P EYR + Sbjct: 247 RWMMQRRIERARALLAERDHSITDIALALGFASSQHFATAFRKACGLTPSEYRKQ 301 >UniRef50_D1PRZ9 DNA-bindng response regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PRZ9_9FIRM Length = 248 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 70/126 (55%), Gaps = 2/126 (1%) Query: 1 MRYDKELTEN--EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMH 58 M + K++ +N K + + ++I +++ I+IED+A + G S + LF+ Sbjct: 122 MDFTKKMRKNLRSDTNSKHINEGKDYIYAHIKERITIEDLADELGVSPSYLSRLFKKETG 181 Query: 59 VPLGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 + + YIR++++ A L+R + S++DIA L F SQ F ++F+++ G +P++YR Sbjct: 182 MSVSAYIRQQKIEIAKNLLRFSDSSLIDIANQLAFSSQSHFIQQFREVTGMTPKKYRDES 241 Query: 119 YWDLAN 124 + + Sbjct: 242 RLNPWD 247 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 57/106 (53%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 + + ++ +L +I N +S+++++++ S+ + LF+ + + EYI K R+ + Sbjct: 181 YKIERIKDVLNYINQNYNKNLSLDELSRQVDMSKFYLCRLFKESLRMSPVEYINKVRVDK 240 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 A L+ T S+ +IA FD+ F + FKK +P ++R ++ Sbjct: 241 AMELLINTDMSVSEIAFECGFDNISYFIKVFKKYMHTTPLKFRKQN 286 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 3/112 (2%) Query: 14 RQKILQQ---LLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 +Q+ +++ + +I + P+S+E++A +G+S+ + LF+ + +Y+ ++R+ Sbjct: 176 QQEYMEKFLFICNYINEHYAEPLSLEEVASLAGFSKYHFTRLFKQYADTTFYKYLNQKRI 235 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDL 122 A L+ S+LDI+L F + SF R F+KL G +P E R D Sbjct: 236 AHAKHLLVDKNLSVLDISLQCGFSNLSSFLRMFRKLTGFTPTELRKMYDGDF 287 >UniRef50_A9BU22 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=A9BU22_DELAS Length = 326 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 63/116 (54%), Gaps = 1/116 (0%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 M + + + ++L +I+ +L+ P+ +A + +SR + +F +M Sbjct: 1 MTNKPSEQASRAEYARRINRVLNYIDAHLDQPLDGAHLADIANFSRFHFHRIFAAWMGET 60 Query: 61 LGEYIRKRRLCRAAILVRL-TAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 LG Y ++RRL +AA + + +++L+ AL+ F S ++F+R FK FGC+P +R Sbjct: 61 LGSYAQRRRLEKAAFRLSCGSKETVLETALATGFQSGEAFARAFKLKFGCTPSAWR 116 >UniRef50_B2JCG9 Transcriptional regulator, AraC family n=52 Tax=Burkholderia RepID=B2JCG9_BURP8 Length = 350 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 58/103 (56%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 R L L +E N+E P++ ++IA G SRR ++ LFR ++ +Y RL +A Sbjct: 218 RHPRLNDALLLMEANIEDPLTSDEIAGLVGVSRRQLERLFRQYLGSMPSKYYLGLRLAKA 277 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 ++ T+KS++ I+L+ F S FS +++ FG +PRE R Sbjct: 278 RTQLQRTSKSVVQISLACGFSSAAHFSNAYRERFGVTPREERR 320 >UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clostridium RepID=A0Q2M6_CLONN Length = 246 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 56/97 (57%) Query: 19 QQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVR 78 Q+++E+I+ N ++ I+++D+A +S + LF+ M + YI K R+ +A ++ Sbjct: 145 QEVVEYIDKNFKNDITLKDVADHVNFSSSYLSKLFKKEMGINFNRYITKIRIDKAKEILI 204 Query: 79 LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + S+ +IA S+ ++ F + FKK+ +P EYR Sbjct: 205 NSNISINEIAFSVGYNEPNYFCKVFKKIVNMTPSEYR 241 >UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL88_9FIRM Length = 303 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 2/115 (1%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 MR K+ + E Q++ + +I + + +++E+ A+ G+S+ + +F+ +M++ Sbjct: 175 MRRSKQDRQWE--YQEVALKACNYINQHYQEKLTLEETAKMVGFSKYHFTRVFKKYMNMT 232 Query: 61 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 EY+ K+R+ A L+ T S+ D+A++ F S SF R FK L CSP E+R Sbjct: 233 FYEYLNKKRVKCAEGLLYSTEMSITDVAMNSGFSSMSSFDRTFKALNKCSPSEFR 287 >UniRef50_Q989Y4 Transcriptional regulator n=2 Tax=Rhizobiales RepID=Q989Y4_RHILO Length = 356 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 61/103 (59%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 I + L +++E +E NL+ P+++ED+A + SRR ++ +F + Y + RL R Sbjct: 218 IHHEGLLKIIEQMERNLDEPVALEDMAASNCLSRRQVERIFSKQIGRSPARYYLEMRLER 277 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 A +L+ + +++IA++ F S FS+ +++ +G +PRE R Sbjct: 278 AHLLIVNSQLPVVEIAMACGFISASHFSKAYRENYGMTPREAR 320 >UniRef50_C1I6N3 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I6N3_9CLOT Length = 288 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 34/106 (32%), Positives = 64/106 (60%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 +M +++ L +IE NL+ I + IA+++GYS + +F+ + + +Y+RKRR Sbjct: 3 DMCYINSIKKALNYIENNLQEDIDLSAIAKEAGYSLYHFHRIFKGIVGDSMKDYVRKRRF 62 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 AA + T KS+++I + ++S++ FSR F+K++G +P E R Sbjct: 63 TEAAKELVYTNKSIVEIGIKYGYESREGFSRAFEKVYGRNPSEVRR 108 >UniRef50_A3Y825 Transcriptional regulator, AraC family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y825_9GAMM Length = 289 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 10/199 (5%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + L+ L +IE NL+ +SIE I+ + G S+ ++ F+ + + L E I RL RAA Sbjct: 3 EKLKAALNYIESNLDKSLSIESISTQVGMSQSHLHRKFKAELGLSLYELIILLRLKRAAY 62 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLAN-------IFPS 128 + ++DIA H+ S Q+F+R F+K+F +P +R R W Sbjct: 63 QLAYRQTKVIDIAFEAHYKSHQAFTRAFQKVFKQAPSAFRKRANWFFWQQKYDPFLALRK 122 Query: 129 FLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIY 188 + LI F I + K ++S + RR AR + K+ + Sbjct: 123 INMNDNTCFNVELIEFHTLSIAYLTHKGHPNQLHRSIQTFIDWRR---ARALPPHKSRTF 179 Query: 189 FVSTFEPSTKSVDLLTVET 207 + +P + + Sbjct: 180 NLLYHDPKRVEPEDYRFDI 198 >UniRef50_C9XX01 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9XX01_CROTZ Length = 306 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 52/100 (52%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 LQ++ + ++ NL P + +AQ G S ++ F+ + E+ +R+ RA L+ Sbjct: 207 LQKVKQHLQANLAAPFHLPTLAQMCGMSSWHLSRQFKQATGMSPSEWFIHQRIQRACRLL 266 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 R T+ ++DIA + + S FS+ F++ G P YR R Sbjct: 267 RETSLPVIDIACEVGYASHSHFSQVFRRKTGMQPAAYRRR 306 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 55/117 (47%) Query: 2 RYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPL 61 Y++ + + + +I+Q++ +I + +S+E +A K SR + F+ Sbjct: 159 NYEENVIKEIDVDNRIIQEVATYIYEHYADNLSLEYVADKFNLSRSYLSKKFKTATGFGF 218 Query: 62 GEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 EYI R+ A L+ T KS+ DIA F+ F F+K G SP +YR + Sbjct: 219 KEYIINVRIQNACNLLLETNKSITDIAFECGFNDSNYFGDAFRKAKGISPHKYRKNE 275 >UniRef50_A0Z695 Transcriptional regulator, AraC family protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z695_9GAMM Length = 338 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 38/101 (37%), Positives = 59/101 (58%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q L+++L+ +E NLE PIS++++A SRR ++ LF ++H Y K RL RA Sbjct: 221 QPKLKEVLQLMEANLEEPISLQELADFVQLSRRQLERLFLKYLHCTPSRYYLKLRLDRAR 280 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 LV+ + +S+++I F S FSR ++K G SPR R Sbjct: 281 RLVKQSTRSIVEITSMCGFVSTTHFSRCYRKYIGVSPRVDR 321 >UniRef50_A9GLA7 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLA7_SORC5 Length = 346 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 69/138 (50%), Gaps = 4/138 (2%) Query: 1 MRYDKELTENEMIR---QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFM 57 + Y + ++ R Q+ + +++++I+ + +S++ +A + +S + +F++ Sbjct: 20 ISYPPPVATSDRSRAEYQRRVNRVIDYIQAHRAEDLSLDTLAAVAAFSPFHFHRVFKSMT 79 Query: 58 HVPLGEYIRKRRLCRAA-ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 L E+I++ RL AA LV+ +L+IAL F S +F+R FK+ FG S +R+ Sbjct: 80 GENLREFIQRTRLETAASHLVQRPHADILEIALENGFSSASAFARAFKERFGMSASAWRN 139 Query: 117 RDYWDLANIFPSFLIRQQ 134 D N + Q Sbjct: 140 GGATDERNARQADRKPGQ 157 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 35/116 (30%), Positives = 59/116 (50%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 M ++ + ++++Q + +I N E IS++DIA+ S F+ M + Sbjct: 180 MEWENSIKNKSPKIKELIQASVNYINNNYERDISLKDIARYVFLSTSYFTRAFKEEMGIS 239 Query: 61 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 Y+ K R+ RA L++ T + DIALS+ F +QQ F+ FKK +P +YR Sbjct: 240 PINYLLKIRVERAKELLKDTDNRISDIALSVGFSNQQRFNDIFKKYVKLTPLQYRK 295 >UniRef50_A6LY67 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LY67_CLOB8 Length = 291 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + +E++E +L +S+E +A++ +S+ + LF+ + +G+Y KRRL Sbjct: 1 MNTKNYVLDAIEYLEKHLLEGVSLEQLAKQFNFSKFHYARLFKAVLGENIGDYQMKRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 AA+ + T S+L+IA+ + SQ+SF+R FK FG +P++YR + L S Sbjct: 61 IAAMSLLETRDSILNIAIMCGYSSQESFTRMFKAYFGITPKDYRDNEIEYLNLYKYSITQ 120 Query: 132 RQQQK-------TECRLINFPETPIFGNSFKYDIE 159 ++ TE +I+ I G + D + Sbjct: 121 EDIERVMSYGTATEYEIIHKNSFEITGLLYHGDNK 155 >UniRef50_A1ZNF5 Transcriptional regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZNF5_9SPHI Length = 469 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 20/221 (9%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 M DK TE + + +L++IE NLE +S+E +++K+ YS + +F + Sbjct: 1 MNADKARTE----YIRRVNFVLDFIEKNLEADLSLESLSKKAYYSPYHFHRVFSTIVGEN 56 Query: 61 LGEYIRKRRLCR-AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 L +Y+ ++R+ R A+IL+ + + ++A F+S+ SFSR FKK +G SP ++ Sbjct: 57 LNQYVNRKRIERIASILLIRSDTPIKELAYIYGFNSESSFSRAFKKYYGISPTRFKLEGK 116 Query: 120 WDLANIFPSFLIRQ-------------QQKTECRLINFPETPIFGNSFKYDIEVSNKSPD 166 L I F + + + + E + G + + + Sbjct: 117 NTLRKIGIEFFTTEKYICSIDHIKKWIEMNAQIVITELQEIKLAGVMHIGEFDKAGNMFQ 176 Query: 167 EEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVET 207 ++ +FK + P+ L T Sbjct: 177 RLMEWGAKKRVLATSDFKA--ITIYHDNPNVTQTSKLRFST 215 >UniRef50_C5ERZ6 Right origin-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ERZ6_9FIRM Length = 164 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 2/130 (1%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 + M Q +++++ ++IE +LE I ++ IA++ YS+ I +F + + +YI+ RR Sbjct: 17 SHMTNQTVVEKIADYIENHLEEDIPLDKIAKELNYSKFYIARVFADNTGHTIYKYIQGRR 76 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSF 129 L AA + T K +++IA + SQQ+F+ F + + C+P+ YR P Sbjct: 77 LTLAARKLAETDKPIVEIAYEARYGSQQAFTLAFSQFYLCTPQTYRKNGV--FVPRLPRI 134 Query: 130 LIRQQQKTEC 139 + T Sbjct: 135 RLGSPATTAV 144 >UniRef50_B8I0Z7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B8I0Z7_CLOCE Length = 287 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 83/199 (41%), Gaps = 6/199 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + +++IE NL + IS +++A + S Q +F +PL EYIR+RR+ Sbjct: 1 MEWLNQMSRAVDYIENNLTNDISYDEVAGIACCSTYYFQRIFSYIAGIPLSEYIRRRRMT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 +AA ++L+ +++IA+ + + +F+R F + G +P R + A SF I Sbjct: 61 KAAFELQLSGARVMEIAVKYGYSTAAAFNRAFHSVHGVAPTVARVKGTKLNAYTPISFTI 120 Query: 132 R--QQQKTECRLINFPETPIFGNSFKYDIEVSNK----SPDEEVKLRRHHLARCMKNFKT 185 ++ R+ I G + E + L+ ++ ++ Sbjct: 121 NITGGERMRYRIETRDRIRIVGVRVPLEEEPEQNFEIVPAFWDNTLKSSVFSKIIELTNK 180 Query: 186 DIYFVSTFEPSTKSVDLLT 204 D + + ++ Sbjct: 181 DPHGILGITAYENPKEIYY 199 >UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7G2_ACAM1 Length = 311 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 60/112 (53%) Query: 6 ELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYI 65 + + ++ + +L + LE+I +L+ + + D+AQ+ G SR LF+ M V +Y Sbjct: 198 KDSSDQGLPPALLNRALEYINDHLDQNLKLVDLAQEVGMSRYYFSRLFKKSMGVAPHQYA 257 Query: 66 RKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 K+R+ +A L+R T + IA F + S+ F++L G +P+ +R + Sbjct: 258 IKQRIKKAKGLLRQTNTPIAMIARQCGFTNPSHLSKYFRQLTGVTPKAFRDQ 309 >UniRef50_C6C8M9 Transcriptional regulator, AraC family n=44 Tax=Gammaproteobacteria RepID=C6C8M9_DICDC Length = 322 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 57/101 (56%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 +L+++ I+ L ++I D+A ++G S + +FR + + +Y+ KRRL +A L Sbjct: 219 VLRRVQARIDAGLAEGLTIGDLAAEAGLSEFHFARMFRQSVGMAPHQYVMKRRLAQAKDL 278 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 +R + S+ D+AL+ F S FS+ F+ FG +P R + Sbjct: 279 LRQSRLSITDVALACGFSSASHFSQRFRAEFGVTPSTLRRQ 319 >UniRef50_C7M7E1 Transcriptional regulator, AraC family n=2 Tax=Bacteroidetes RepID=C7M7E1_CAPOD Length = 289 Score = 137 bits (346), Expect = 3e-31, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 82/202 (40%), Gaps = 5/202 (2%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 K +T N+ + + ++ E+I +L+ I I+ +A + S + +F+ + Sbjct: 2 KSITHNDYTQ--RINKVAEYINGHLDTSIKIKTLANVANLSDFHFCRIFKALKGESPIAF 59 Query: 65 IRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLAN 124 I + R+ AA L+R + S+ +IA ++ +++ S S+ FK +G +P +YR D+ Sbjct: 60 IARLRIETAAQLLRYSTLSVEEIAFNIGYETPASLSKAFKNQYGITPTQYR--TNRDIYI 117 Query: 125 IFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFK 184 + + +++ + + + N + E ++ + Sbjct: 118 MKKEINNPEVVLKAPKIVELEPKSLIYVALTGEYGTLNYNKAYEQLWGVVK-SQKLFTKG 176 Query: 185 TDIYFVSTFEPSTKSVDLLTVE 206 + VS +P L E Sbjct: 177 IESICVSYDDPKITEASLQRSE 198 >UniRef50_B2SZ92 Transcriptional regulator, AraC family n=12 Tax=Proteobacteria RepID=B2SZ92_BURPP Length = 314 Score = 137 bits (346), Expect = 3e-31, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 3/135 (2%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 + N + L ++L+ I +L+ P+ I+ +A+ + S + +++ + +R+ Sbjct: 30 SGNRARYETRLGRVLDHIYDHLDEPLDIDRLAEIACLSPYHWHRIYQAMYGETVATTVRR 89 Query: 68 RRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFP 127 RL RAA + + +++IA + S QSFSR F+ +FG P +YR + + F Sbjct: 90 LRLHRAAGYLANGSMPIVEIAERSGYSSLQSFSRTFRAVFGVPPAQYRKQ---GTHSRFR 146 Query: 128 SFLIRQQQKTECRLI 142 L Q T ++ Sbjct: 147 PALSGDDQMTMREVV 161 >UniRef50_B1QUU6 Two-component response regulator n=3 Tax=Clostridium butyricum RepID=B1QUU6_CLOBU Length = 351 Score = 137 bits (346), Expect = 3e-31, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 56/102 (54%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 +L +L +I N I++E +++ S + LF+ + +YI ++ +A L Sbjct: 245 LLNPVLIYISENYSEKITLESVSKACNLSVFYLSKLFKKNTGMKFIDYINLYKIEKAKQL 304 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 + T S+++I++SL +D FS+ FKK+ G +P YR+++ Sbjct: 305 LENTDMSIINISMSLGYDESGYFSKVFKKVVGVTPSAYRNKN 346 >UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I2_9CLOT Length = 295 Score = 137 bits (346), Expect = 3e-31, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 61/109 (55%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 +++I+ + L++++++I+ N ++PISI+++A + YS + F+ +YI R Sbjct: 186 SDLIKVENLKEVIKYIQTNYKNPISIKELADIAQYSEYHFLRFFKAQTGKTCTQYINYFR 245 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 + +A +L+ T S+ +IA + F F + FKK SP +YR + Sbjct: 246 IQKATLLLFDTNLSITEIAYEVGFGDVSYFIKTFKKFLSISPTKYRKSN 294 >UniRef50_A8MJ72 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJ72_ALKOO Length = 302 Score = 137 bits (346), Expect = 3e-31, Method: Composition-based stats. Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 5/159 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M ++Q L++I+ ++ I++E++A+ +G+S + +F +F+ +P+ EYI +R+L Sbjct: 1 MHYLNLIQNTLDYIDFHILEKITVEELAKIAGFSTYHFYKVFNSFVGMPVMEYITRRKLQ 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 A + K +LDIAL+ F++ F++ FKK FG P YR + Sbjct: 61 YALYDLSNG-KKVLDIALTYGFETHAGFTKAFKKSFGYPPSFYRIHAPIGPLKKVDLKKL 119 Query: 132 RQQQK----TECRLINFPETPIFGNSFKYDIEVSNKSPD 166 ++ + E ++I I G FK + + S D Sbjct: 120 KENKTGGIIMEPKIIQRDSFKIVGYEFKTTLRNNAHSRD 158 >UniRef50_A6VUB3 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=A6VUB3_MARMS Length = 339 Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 63/120 (52%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q L + ++ +E N++ P+S +DIA G SRR+++ LF+ + + Y + RL A Sbjct: 216 QPKLVEAVQLMEANIQEPLSSDDIAYHVGVSRRHLERLFKGNLDIVPSRYYLELRLQHAR 275 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQ 134 L+ T K++ ++ + F S FS +K FG SPRE R++ + A +++ Sbjct: 276 QLIIQTDKAITEVGVECGFGSAPHFSTTYKGFFGISPREERNKIHNKSAAPVQMDKKKRR 335 >UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NS86_9BACE Length = 425 Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 52/117 (44%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 E+ + I+ + +E+++ N +++ED A G S +F+ + Y+ R+ Sbjct: 304 EVKHRDIICKAIEYLKRNCRDRVTLEDTAGHVGLSPSYFSRVFKEEVGESFNSYLTALRI 363 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFP 127 R ++ T S+ +I FD Q F++ F+K G +P +R R P Sbjct: 364 SRGRAMLLDTDASIAEICDRCGFDDQSYFTKVFRKYTGVTPGRFRARRGRPENGEEP 420 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 57/101 (56%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + ++ +L ++ + + ISIE+IA YS+ F+ M + +Y+ RL AA Sbjct: 189 EKIKTILSYVAEHFQDNISIEEIAGHCFYSKSYFMKFFKETMGMSFVQYLNDYRLEVAAK 248 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 L+ T+ +++IA++ FD+ F+R FKK +G +P +YR Sbjct: 249 LLTTTSDDIINIAINTGFDNLSYFNRCFKKKYGITPGKYRK 289 >UniRef50_C0ET05 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C0ET05_9FIRM Length = 355 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 56/100 (56%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 ++ ++++IE NL+ IS+ED+A S + +F+ M V Y+ R++ A ++ Sbjct: 244 MKAVIDYIERNLKKGISLEDVANHVNISTYYLSKIFKKEMGVNFITYVTDRKMDLAKEML 303 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 T +L+IAL L ++ FS+ FKK G +P EYR + Sbjct: 304 VNTDIPVLNIALDLAYNEANYFSKAFKKKTGLTPSEYREK 343 >UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS52_9FIRM Length = 300 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 2/111 (1%) Query: 9 ENEMIR--QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 +++M + ++ +L WI+ NL+ I++ IA + R Q +F ++H EY++ Sbjct: 184 DSDMPHLAEVRIKDMLGWIDRNLKDEITVSGIAGSANICVRECQRIFSQYVHYRPMEYVQ 243 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 +RR+ AA L+R T + + DIAL F S F ++FK + GC+P YR + Sbjct: 244 RRRITLAAELLRTTHRQVTDIALECGFSSVSYFIKQFKNIVGCTPTGYRKK 294 >UniRef50_B9Z8M5 Transcriptional regulator, AraC family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8M5_9NEIS Length = 327 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 36/101 (35%), Positives = 58/101 (57%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q L + + +E N+E P++ +DIA G SRR ++ LF+ + +Y + RL RA Sbjct: 216 QPKLTEAVSLMEANIEEPLTTDDIAYYVGISRRQLERLFKQHLSAVPSKYYLELRLKRAR 275 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L++ T+KS++ I L+ F S FS ++ FG +PRE R Sbjct: 276 QLLQQTSKSIVQIGLACGFSSGPHFSSSYRNHFGITPREER 316 >UniRef50_C5RQY0 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQY0_CLOCL Length = 286 Score = 136 bits (344), Expect = 4e-31, Method: Composition-based stats. Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 2/151 (1%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L +++IE ++ I++ D+++ + YS + LF +PL EYIRKR+L AA+ + Sbjct: 7 LNLAMDYIEEHICDDIALADVSEVTTYSSYHFGRLFYYIAEMPLSEYIRKRKLTLAAMEL 66 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD--YWDLANIFPSFLIRQQQ 135 + ++D+A+ +D+ SF+R F + G +P R + I+ Q Sbjct: 67 QSNDVKVIDLAVKYGYDNADSFTRAFVRQHGVTPTVGRQTGVMLKIFTPLTFQIKIKGVQ 126 Query: 136 KTECRLINFPETPIFGNSFKYDIEVSNKSPD 166 + R+ E IFG + + K PD Sbjct: 127 EMNWRIEQKEEFEIFGIERIFRNDDVGKIPD 157 >UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas RepID=A4VLS2_PSEU5 Length = 377 Score = 136 bits (344), Expect = 4e-31, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 48/99 (48%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L++++ + L S+ +AQ S + +F+ + +Y R+ RA L+ Sbjct: 278 LRKVIGVMNERLAEEFSLAALAQVVELSEYHFSRMFKRATGLSPSQYFIGLRMARARQLL 337 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 T +S++DI L + + S FS+ F++ G +P YR Sbjct: 338 LETPRSIIDIGLEVGYSSPSHFSQVFRREVGVTPSIYRQ 376 >UniRef50_A3SQW3 Transcriptional regulator, AraC family protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SQW3_9RHOB Length = 359 Score = 136 bits (344), Expect = 4e-31, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 59/109 (54%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 E E +R ++ + L +E +E P + +IA++ G S R ++ LF++ + Y + Sbjct: 234 AERESVRHPVVVKALNVMEREIEMPPTPSEIAEEVGISTRQLERLFKHHLGRSPKRYYNE 293 Query: 68 RRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 R+ +A L+ T ++++IA++ F S FS+ F+++ CSP R Sbjct: 294 FRVQKAYRLILQTDLTVIEIAMACGFSSASHFSKVFRQIHNCSPLSLRR 342 Score = 41.0 bits (95), Expect = 0.038, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 26/63 (41%), Gaps = 5/63 (7%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYS-RRNIQLLFRNFMHVPLGEYIR 66 + + +Q+ I L+ +++ +IA G+S + +FR + +R Sbjct: 286 SPKRYYNEFRVQKAYRLI---LQTDLTVIEIAMACGFSSASHFSKVFRQIHNCSPLS-LR 341 Query: 67 KRR 69 + R Sbjct: 342 RER 344 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 136 bits (344), Expect = 4e-31, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 56/104 (53%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 ++ + ++ L++I N I I+ +A+ + S+ LF+ H+ +YI K R+ + Sbjct: 179 LKLEKIKSALDFINSNYSSDIDIDLLAKLANLSKFYFCRLFKEITHLTPVDYINKFRVEK 238 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 A L++ T S+ +IA + F++ F + FK+ G +P +Y+ Sbjct: 239 AIELIKNTNLSISEIAFEVGFNNVSYFIKVFKEYVGVTPFKYKK 282 >UniRef50_Q46N77 Transcriptional regulator, AraC family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46N77_RALEJ Length = 287 Score = 136 bits (344), Expect = 4e-31, Method: Composition-based stats. Identities = 30/99 (30%), Positives = 50/99 (50%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L++++++IE +L P +I +AQ +G S R+ FR ++ RL RA + Sbjct: 185 LRRVIDYIEADLSRPFTINGLAQVAGVSPRHFMRAFRESTGQTPLRFVYGLRLERAKEFL 244 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 +S ++AL F Q FS FKK G +P ++R Sbjct: 245 LDPRRSATEVALDCGFSHAQHFSTAFKKATGVTPSDFRR 283 >UniRef50_C3RHZ9 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RHZ9_9MOLU Length = 280 Score = 136 bits (344), Expect = 4e-31, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 6/186 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + L +E+IE +L I E +A+ +G + Q F ++ L EYIRKRR+ Sbjct: 1 MEWIERLNTTIEYIENHLTEKIDYEQLAKIAGCPSYHFQKTFLYMTNISLSEYIRKRRIS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD--YWDLANIFPSF 129 AA+ ++ ++DIAL ++S +F+R F+ + G +P R ++ + +F Sbjct: 61 LAAVDLQTGEDKIIDIALKYGYESPTAFNRAFQAVHGIAPSLVRKKNVQIKSFPALKFTF 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 I+ + R+ I G S E+ + V++ + +Y Sbjct: 121 SIQGLDELSFRIEKKDSFKILGISSLLSKELL----ENFVQIPKQWDKALNDGTLNQLYR 176 Query: 190 VSTFEP 195 ++ P Sbjct: 177 LNNQTP 182 >UniRef50_A8TRB7 Probable transcriptional regulator n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRB7_9PROT Length = 344 Score = 136 bits (344), Expect = 5e-31, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 60/110 (54%) Query: 6 ELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYI 65 EL + L ++ +E NLE P+S D+A+++G S R ++ LFR ++ Y Sbjct: 208 ELRARLGVSHPKLISVISEMELNLEEPLSQTDLAERAGLSTRQLERLFRKYLGATPTRYY 267 Query: 66 RKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 RL RA L+ T+ S+L +AL+ F S FS+ +++ FG +PR R Sbjct: 268 LTLRLQRARQLLVQTSMSILSVALACGFVSASHFSKCYRECFGRTPRAER 317 >UniRef50_C4ZHQ7 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C4ZHQ7_EUBR3 Length = 246 Score = 136 bits (344), Expect = 5e-31, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 67/117 (57%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 L + I K + Q +++I N++ I+I D+A +G S + +F+ + V + +YIR Sbjct: 130 LQKKSSILSKPVTQCVDYIYSNIKERITIADLAAYTGLSESYLSRVFKQNLGVSISDYIR 189 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLA 123 ++++ +A L++ + K ++DIA L F SQ F + F+ G +P++YR R Y + Sbjct: 190 EKKIEKATHLLKYSDKPIIDIANYLSFSSQSHFIQIFEGFTGLTPKKYRDRYYKSMW 246 >UniRef50_A8RMQ2 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RMQ2_9CLOT Length = 502 Score = 136 bits (344), Expect = 5e-31, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 1/113 (0%) Query: 8 TENEMIRQKILQQLLEWIECNLEHP-ISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 ++ + + + + L ++E N P +S+ED A +G S F++ V +Y+ Sbjct: 384 SQKSGVYSRPVVKALAYMEENYSSPDLSMEDTAVAAGLSSARFSTSFKSETGVTFTDYLL 443 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 K R+ +A L+R + + +IA+ + + FS FKK GC P EYR + + Sbjct: 444 KLRMEKAKDLMRDPNRKIYEIAMMTGYSNIPYFSTAFKKYTGCPPSEYREKQH 496 >UniRef50_A9KJQ6 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A9KJQ6_CLOPH Length = 265 Score = 136 bits (344), Expect = 5e-31, Method: Composition-based stats. Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 4/141 (2%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M QK + +++IE NL +++ A G S Q +F H+PL EYIR+R+L Sbjct: 1 MDWQKGMNSAIDYIEKNLTGNVNVRTAAGFVGCSTWEFQRIFSFLTHIPLSEYIRQRKLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 AA ++ ++DIAL ++S +FSR F KLFG +P R+ + N+ I Sbjct: 61 LAAQEIKDNDVKIIDIALKYGYESPAAFSRAFNKLFGIAPSSVRNTEN----NLKTYPRI 116 Query: 132 RQQQKTECRLINFPETPIFGN 152 ++ RLI G Sbjct: 117 TFEKIENERLIKMSRFSERGY 137 >UniRef50_B3RBG6 Putative transcriptional Regulator, AraC n=1 Tax=Cupriavidus taiwanensis RepID=B3RBG6_CUPTR Length = 306 Score = 136 bits (344), Expect = 5e-31, Method: Composition-based stats. Identities = 30/99 (30%), Positives = 56/99 (56%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 ++QL E+I+ +L H I++E +A+++G S +F++ +P Y+ +R+ A Sbjct: 194 RMKQLDEYIDAHLTHRITLETLARQAGLSPYYFTRVFKDATGLPPYRYVLHKRIESACAA 253 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +R S+ +AL+ F FS++FKK+ G +P YR Sbjct: 254 LRRDELSIEGVALACGFSDNAQFSKQFKKICGVTPSVYR 292 >UniRef50_B2VHH7 Putative transcriptional regulator n=1 Tax=Erwinia tasmaniensis RepID=B2VHH7_ERWT9 Length = 110 Score = 136 bits (343), Expect = 5e-31, Method: Composition-based stats. Identities = 43/107 (40%), Positives = 69/107 (64%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 ++ +I+ +++WIEC++E ++IE +A KSGYS+ ++Q F+ + L +IR RRL + Sbjct: 1 MKNEIVDVIVDWIECHIEEGLNIEAVAAKSGYSKWHLQRAFKAQKGITLATFIRGRRLEQ 60 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 AA + + KS++ I+ L F SQQ F R FKK F +PR+YR R Sbjct: 61 AAQSLVNSTKSIMAISTELGFSSQQCFQRVFKKHFHITPRDYRIRHR 107 >UniRef50_UPI0001973804 AraC-family transcriptional regulator n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973804 Length = 329 Score = 136 bits (343), Expect = 5e-31, Method: Composition-based stats. Identities = 34/113 (30%), Positives = 66/113 (58%), Gaps = 2/113 (1%) Query: 5 KELTENEMIRQ--KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLG 62 ++ +EM RQ I+ + L +IE NL+ + ++ +A S+ ++ F + + Sbjct: 37 QQKGGSEMHRQSVPIVSEALFYIEENLDSRLDLQTVASALHCSKYHLHRSFAKTAGLTIH 96 Query: 63 EYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +Y+R+R+L AA L+ + K +++IAL ++SQQ+F+ FK ++ +P EYR Sbjct: 97 DYVRRRQLTEAARLLVFSKKPVIEIALMSGYESQQAFAGSFKSMYKMTPGEYR 149 >UniRef50_Q1D535 Transcriptional regulator, AraC family n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D535_MYXXD Length = 262 Score = 136 bits (343), Expect = 6e-31, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 6/121 (4%) Query: 2 RYDKELTENEMIRQK------ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRN 55 R +E + RQ+ L+++ ++E +L PI + +AQ+SG S + FR Sbjct: 139 RLLQEPGTSRAARQRGGLSPAALRRVQLYVEAHLAEPIRVGALAQRSGLSVFHFTRAFRQ 198 Query: 56 FMHVPLGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + ++++RR+ RA L+ ++ + DIAL++ F SQ F+ F KL G +P R Sbjct: 199 STGMTPHVWVQQRRVERARDLLSNSSLPLGDIALAVGFSSQSHFTTVFHKLTGLTPAVIR 258 Query: 116 H 116 Sbjct: 259 R 259 >UniRef50_C7IHL6 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHL6_9CLOT Length = 290 Score = 136 bits (343), Expect = 6e-31, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 2/143 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + + ++E NL I +++A+K+ S + Q +F VPL EYIR+RRL Sbjct: 1 MNWLDKMNEAICYVEDNLAGEIDFDEVARKACCSTYHFQRMFSFITEVPLSEYIRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSF-- 129 AA ++ ++ ++++A ++S +F+R F+ L G +P R A SF Sbjct: 61 LAAFELQNSSVKVIELAFKYGYESPDAFTRAFQNLHGVTPTSARDMGVQLKAYPRISFHI 120 Query: 130 LIRQQQKTECRLINFPETPIFGN 152 I+ + R+ +FG Sbjct: 121 SIKGDVEMNYRIEEKESFSVFGI 143 >UniRef50_C6PVM8 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=C6PVM8_9CLOT Length = 277 Score = 136 bits (343), Expect = 6e-31, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 96/221 (43%), Gaps = 27/221 (12%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 MI K++ Q +++I +L+ ISIED+A +S+ +F+ + +I++ ++ Sbjct: 1 MITNKLVNQSIDYIMRHLDEEISIEDVADYCHFSKYYFSRVFKKETGESIYAFIKRLKME 60 Query: 72 RAAILVR-LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH-RDYWDLANIFPSF 129 ++A+ ++ KS+ DI + S ++S FKK SP E+R ++ + + F Sbjct: 61 QSALNLKIEKDKSITDIGYDYGY-SPSNYSSAFKKHHNISPAEFRKSKNTTCVPHPFYQD 119 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 + + Q E +YD + + D+ V + ++ ++ K Sbjct: 120 KLAKFQSFE----------------EYDQRILIQELDDFVVIYERYIGNYIELGKN---- 159 Query: 190 VSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYD 230 ++ + K D +T + + D P + + LYD Sbjct: 160 --WYDFTEKYKDYFKEDTL--LIERFYDDPSITSLDQCLYD 196 >UniRef50_A9HPW1 Transcriptional regulator, AraC family protein n=1 Tax=Roseobacter litoralis Och 149 RepID=A9HPW1_9RHOB Length = 273 Score = 136 bits (343), Expect = 7e-31, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 86/222 (38%), Gaps = 14/222 (6%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 + +++++I +S++ +A + SR + +F M + IR R+ +A +L Sbjct: 3 RILRVIDYIHTQAADDLSLDQLADVAAMSRFHWHRVFTAIMGASPAQIIRSVRMHKATML 62 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQK 136 + T + IA + + + +SFSR FK ++G +P +R+ + +A Sbjct: 63 LLRTDLPIAQIAAHVGYSNDRSFSRTFKDIYGQTPTAFRNAGFPGMAP--HPNPQGVSNV 120 Query: 137 TECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRH--HLARCMKNFKTDIYFVSTFE 194 + + + + S + D + + + + H + + V Sbjct: 121 FDVDIQTTSDKRLAALSHRGDYAEGSVAYQKVATIISTGNHWPQT-----RGMAGVYYDN 175 Query: 195 PSTKSVDLLTVETFAGTVCEYADMP---KEWTTTRGLYDPTH 233 P + + + AG + E +P +E T G Y H Sbjct: 176 PEVTPTE--DLRSHAGVLWEGGAIPDGLEEVQLTGGRYAVLH 215 >UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C5EK80_9FIRM Length = 291 Score = 136 bits (343), Expect = 7e-31, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 61/103 (59%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 ++ +++ +IE N ++ IS+EDIA +R +FR+ + E++ R+ + Sbjct: 174 LQDFYIREATSFIEQNFQNDISVEDIAAFCNLNRSYFGKIFRDAVGKSPQEFLISYRMTK 233 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 AA L++LT ++ DI ++ + SQ FSR FKK +G SPRE+R Sbjct: 234 AAELLKLTELTIKDIGNAVGYPSQLHFSRAFKKTYGISPREWR 276 >UniRef50_Q2BBL2 Transcriptional regulator, AraC family protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BBL2_9BACI Length = 311 Score = 136 bits (343), Expect = 7e-31, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 5/170 (2%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + ++LE+I+ +L+ + +E +A+ S YS + Q +F++FM YI++ RL AA L+ Sbjct: 10 ITKVLEYIDQHLQDTLPLEKLAKVSTYSPFHFQRIFKSFMGESPAAYIKRLRLENAAHLL 69 Query: 78 RLTAK-SMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQK 136 + + ++AL F S F+ FK+ F SP+++R Y +L + + Sbjct: 70 IYEREIPITEVALMCGFSSISYFTYSFKENFSTSPKKWREGAYLELFPRVYQDSKKSKLF 129 Query: 137 TECRLINFPETPIFGNSFKY-DIEVSNKSPDEEVK-LRRHHLARCMKNFK 184 + + + P N F++ D++ + R + + Sbjct: 130 SNIKKEEQQQNPY--NEFRWLDLDKVRTIELPVCATVNRQSVGPYTEGIP 177 >UniRef50_UPI00019685E3 hypothetical protein BACCELL_00469 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI00019685E3 Length = 329 Score = 136 bits (342), Expect = 7e-31, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 2/142 (1%) Query: 4 DKELTENEMIRQ--KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPL 61 + E TE K + Q++++I+ NL+ I + +A + S + +F++ M+ + Sbjct: 38 NGEFTEESTAYSYLKPVNQVVDYIQSNLQEKIELTTLANLANISHFHFHRIFKSVMNENV 97 Query: 62 GEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWD 121 GEY+++ RL RAA ++ T ++ +IA + + +Q + S+ FKK F SP YR Sbjct: 98 GEYVQRVRLERAAFKLQTTNLNLTEIAEQVGYQTQFALSKAFKKYFNISPSTYRSMPTDL 157 Query: 122 LANIFPSFLIRQQQKTECRLIN 143 + + + R+I Sbjct: 158 TIPVRREECGISDIRQDIRVIE 179 >UniRef50_C9XKB1 AraC-family transcriptional regulator n=18 Tax=Clostridiales RepID=C9XKB1_CLODC Length = 294 Score = 136 bits (342), Expect = 7e-31, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 80/144 (55%), Gaps = 11/144 (7%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + +++IE +L + ++ IA YS+ ++ F + + + +YI++R+L AA L+ Sbjct: 16 VITAIDYIEEHLSEKLDLDIIANAVHYSKYHLHRTFTTSVGLTMHDYIKRRKLTEAAKLL 75 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH-RDYWDLA--------NIFPS 128 + K +++IAL ++SQQ+F+ FK ++ SP +YR ++++ L N+F Sbjct: 76 VFSKKPIIEIALIAGYESQQAFTSIFKAMYKKSPNKYRKEQEFYPLQLRFVLKKDNLFSK 135 Query: 129 FLIRQQQKTECRLINFPETPIFGN 152 ++ ++ E +L + + P++ N Sbjct: 136 NVLELEK--EIKLASMSDIPLWMN 157 >UniRef50_A3YG62 Transcriptional regulator, AraC family protein n=2 Tax=Marinomonas sp. MED121 RepID=A3YG62_9GAMM Length = 337 Score = 136 bits (342), Expect = 7e-31, Method: Composition-based stats. Identities = 33/101 (32%), Positives = 55/101 (54%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 L +++ +E NLE PIS++++A SRR ++ F+ ++ Y K RL RA Sbjct: 218 HSKLMEVVSLMEANLEEPISLDELASFVSMSRRQLERQFQKHLNCTPSRYYLKLRLVRAR 277 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L+ T+ S+ DI ++ F S FS+ +++ FG PR R Sbjct: 278 KLLTQTSMSITDIGIACGFVSTPHFSKCYREYFGIPPRNER 318 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77601 Putative HTH-type transcriptional regulator ykgA... 265 8e-70 UniRef50_B5XU59 Transcriptional regulator, AraC family n=33 Tax=... 212 7e-54 UniRef50_D2TW49 Right origin-binding protein n=1 Tax=Arsenophonu... 211 1e-53 UniRef50_B6XK96 Putative uncharacterized protein n=3 Tax=Enterob... 205 2e-51 UniRef50_D1UAH3 Transcriptional regulator, AraC family n=1 Tax=D... 202 6e-51 UniRef50_B4EY53 Right origin-binding protein n=55 Tax=Enterobact... 202 9e-51 UniRef50_D1P487 Right origin-binding protein n=2 Tax=Providencia... 202 1e-50 UniRef50_C4X304 Right origin-binding protein n=9 Tax=cellular or... 202 1e-50 UniRef50_C6IVK7 AraC family transcriptional regulator n=1 Tax=Pa... 201 2e-50 UniRef50_B8FN17 Transcriptional regulator, AraC family n=1 Tax=D... 201 2e-50 UniRef50_C6J7H0 Transcriptional regulator n=1 Tax=Paenibacillus ... 199 6e-50 UniRef50_P0ACI1 Right origin-binding protein n=101 Tax=Enterobac... 198 1e-49 UniRef50_Q31GA4 Transcriptional regulator, AraC family n=3 Tax=P... 198 1e-49 UniRef50_A5G790 Transcriptional regulator, AraC family n=3 Tax=B... 197 4e-49 UniRef50_B2HTR6 DNA gyrase inhibitor n=6 Tax=Proteobacteria RepI... 197 4e-49 UniRef50_B5RA11 Putative transcriptional regulator n=35 Tax=Salm... 194 2e-48 UniRef50_Q9K766 Transcriptional regulator (AraC/XylS family) n=1... 193 3e-48 UniRef50_Q8A6I0 Transcriptional regulator, AraC-type n=21 Tax=Ba... 192 1e-47 UniRef50_C3LC07 Transcriptional regulator, AraC family n=7 Tax=B... 191 2e-47 UniRef50_C6BZC0 Transcriptional regulator, AraC family n=1 Tax=D... 191 2e-47 UniRef50_A4BA20 Transcriptional regulator, AraC family protein n... 190 3e-47 UniRef50_Q81BV9 Transcriptional regulator, AraC family n=72 Tax=... 189 7e-47 UniRef50_Q5WGK8 AraC/XylS family transcriptional regulator n=2 T... 189 8e-47 UniRef50_C8QBQ6 Transcriptional regulator, AraC family n=1 Tax=P... 188 1e-46 UniRef50_Q9K6U1 Transcriptional regulator (AraC/XylS family) n=1... 188 2e-46 UniRef50_B1HRP5 Transcriptional regulator, AraC/XylS family n=3 ... 188 2e-46 UniRef50_A9KFE4 Transcriptional regulator, AraC family n=4 Tax=P... 187 2e-46 UniRef50_B6R4C2 Transcription activator, effector binding n=1 Ta... 187 4e-46 UniRef50_B8H068 Transcriptional regulator, AraC family n=13 Tax=... 187 4e-46 UniRef50_Q72FD7 Transcriptional regulator, AraC family n=3 Tax=D... 186 5e-46 UniRef50_C4XUB5 AraC family transcriptional regulator n=1 Tax=De... 186 6e-46 UniRef50_C2LM40 Right origin-binding protein n=2 Tax=Proteus mir... 186 7e-46 UniRef50_C6IS69 Transcriptional regulator n=11 Tax=Bacteroides R... 185 1e-45 UniRef50_Q64RP2 AraC-type transcriptional regulator n=6 Tax=Bact... 183 3e-45 UniRef50_C9YDH7 Putative uncharacterized protein n=1 Tax=Curviba... 183 3e-45 UniRef50_A3ZMZ0 Transcriptional regulator, AraC family protein n... 183 3e-45 UniRef50_B6ICR1 Putative transcription regulator n=1 Tax=Escheri... 183 4e-45 UniRef50_C1I964 Transcription activator n=1 Tax=Clostridium sp. ... 182 7e-45 UniRef50_A9BU22 Transcriptional regulator, AraC family n=2 Tax=P... 182 8e-45 UniRef50_Q30V01 Transcriptional regulator, AraC type n=1 Tax=Des... 182 8e-45 UniRef50_A6GKR6 Transcriptional regulator, AraC family protein n... 181 1e-44 UniRef50_A6FZ48 Probable AraC-family transcriptional regulator n... 180 3e-44 UniRef50_UPI0001C36EC6 transcriptional regulator, AraC family pr... 180 4e-44 UniRef50_A6GAG6 Transcriptional regulator, AraC type n=1 Tax=Ple... 180 4e-44 UniRef50_Q88KW6 Transcriptional regulator, AraC family n=11 Tax=... 179 6e-44 UniRef50_A7GBT6 Transcriptional regulator, AraC family n=13 Tax=... 179 6e-44 UniRef50_Q12JT5 Transcriptional regulator, AraC family n=9 Tax=G... 179 8e-44 UniRef50_Q2BPM6 AraC-family transcriptional regulator n=2 Tax=Ga... 178 1e-43 UniRef50_Q2NSQ1 Putative right origin-binding protein n=1 Tax=So... 178 1e-43 UniRef50_C6C946 Transcriptional regulator, AraC family n=3 Tax=D... 178 1e-43 UniRef50_UPI0001B9EE80 transcriptional regulator, AraC family n=... 178 1e-43 UniRef50_B3QWJ9 Transcriptional regulator, AraC family n=2 Tax=B... 178 2e-43 UniRef50_A8G9B3 Transcriptional regulator, AraC family n=1 Tax=S... 177 2e-43 UniRef50_B4EVW5 AraC-family transcriptional regulator n=3 Tax=Pr... 177 2e-43 UniRef50_C6CRA3 Transcriptional regulator, AraC family n=8 Tax=B... 177 4e-43 UniRef50_A8UPH5 Transcriptional regulator, AraC-type n=3 Tax=Fla... 177 4e-43 UniRef50_A6W3J7 Transcription activator effector binding n=1 Tax... 176 5e-43 UniRef50_B8I706 Transcriptional regulator, AraC family n=1 Tax=C... 176 6e-43 UniRef50_Q97LX8 Transcriptional regulator (HTH_ARAC-domain) n=1 ... 176 7e-43 UniRef50_A9HPW1 Transcriptional regulator, AraC family protein n... 175 8e-43 UniRef50_C9NSU9 Putative uncharacterized protein n=1 Tax=Vibrio ... 175 1e-42 UniRef50_A3VBK3 Transcriptional regulator, AraC family protein n... 175 1e-42 UniRef50_C7M7E1 Transcriptional regulator, AraC family n=2 Tax=B... 175 2e-42 UniRef50_Q17ZT7 AraC-family transcriptional regulator n=4 Tax=Cl... 174 2e-42 UniRef50_A8TTK0 Transcriptional regulator, AraC family protein n... 174 2e-42 UniRef50_A7FVD8 Transcriptional regulator, AraC family n=4 Tax=C... 174 2e-42 UniRef50_B8FSY0 Transcriptional regulator, AraC family n=6 Tax=C... 174 2e-42 UniRef50_B6R2M9 Transcriptional regulator, AraC family n=3 Tax=R... 174 2e-42 UniRef50_B7GST4 Transcription activator, effector binding n=1 Ta... 173 3e-42 UniRef50_B2TL55 Transcriptional regulator, AraC/XylS family n=2 ... 173 4e-42 UniRef50_A9GLA7 Transcriptional regulator, AraC family n=1 Tax=S... 173 5e-42 UniRef50_C8P1I3 AraC family transcriptional regulator n=1 Tax=Er... 173 5e-42 UniRef50_C6CRY2 Transcriptional regulator, AraC family n=69 Tax=... 173 6e-42 UniRef50_A9KRP2 Transcriptional regulator, AraC family n=7 Tax=B... 172 1e-41 UniRef50_C1FU00 Transcriptional regulator, AraC family n=8 Tax=F... 171 1e-41 UniRef50_A3Y825 Transcriptional regulator, AraC family protein n... 171 1e-41 UniRef50_A8FAK9 Transcriptional regulator n=3 Tax=Bacillus RepID... 170 3e-41 UniRef50_C1DQ04 Transcriptional regulator, AraC family n=1 Tax=A... 170 3e-41 UniRef50_B3CE13 Putative uncharacterized protein n=1 Tax=Bactero... 170 4e-41 UniRef50_B7HW35 Transcriptional regulator, AraC family n=34 Tax=... 170 5e-41 UniRef50_A6LYZ8 Transcription activator, effector binding n=1 Ta... 169 6e-41 UniRef50_A1ZNF5 Transcriptional regulator n=1 Tax=Microscilla ma... 169 6e-41 UniRef50_A6UD97 Transcription activator effector binding n=14 Ta... 168 2e-40 UniRef50_Q18AY3 AraC-family transcriptional regulator n=15 Tax=B... 168 2e-40 UniRef50_B1KWH9 Transcriptional regulator, AraC family n=2 Tax=F... 168 2e-40 UniRef50_A6M032 Transcription activator, effector binding n=19 T... 168 2e-40 UniRef50_C7IEN8 Transcriptional regulator, AraC family n=1 Tax=C... 167 2e-40 UniRef50_A6EIJ9 Transcriptional regulator, AraC family protein n... 167 3e-40 UniRef50_UPI0001C357C1 AraC family transcription regulator n=1 T... 167 3e-40 UniRef50_A9MRK1 Putative uncharacterized protein n=1 Tax=Salmone... 167 3e-40 UniRef50_A9KR18 Transcriptional regulator, AraC family n=3 Tax=F... 166 4e-40 UniRef50_B8I0Z7 Transcriptional regulator, AraC family n=3 Tax=C... 166 5e-40 UniRef50_B0SDP4 Transcriptional regulator, AraC family n=2 Tax=L... 166 7e-40 UniRef50_B8K3P3 Transcriptional activator n=2 Tax=Vibrio RepID=B... 165 9e-40 UniRef50_C9NSN9 Transcriptional regulator AraC family n=1 Tax=Vi... 165 1e-39 UniRef50_B0N339 Putative uncharacterized protein n=1 Tax=Clostri... 165 1e-39 UniRef50_P96662 Uncharacterized HTH-type transcriptional regulat... 165 1e-39 UniRef50_C5RP62 Transcriptional regulator, AraC family n=1 Tax=C... 165 1e-39 UniRef50_B2SZ92 Transcriptional regulator, AraC family n=12 Tax=... 165 1e-39 UniRef50_C0CY04 Putative uncharacterized protein n=2 Tax=Clostri... 165 1e-39 UniRef50_Q24TQ4 Putative uncharacterized protein n=2 Tax=Clostri... 164 2e-39 UniRef50_C5RJ15 Transcriptional regulator, AraC family n=1 Tax=C... 164 3e-39 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 163 4e-39 UniRef50_C3BTE5 Transcriptional regulator, AraC n=1 Tax=Bacillus... 163 4e-39 UniRef50_D1ARB2 Transcriptional regulator, AraC family n=1 Tax=S... 162 7e-39 UniRef50_C6CRD1 Transcriptional regulator, AraC family n=2 Tax=F... 162 1e-38 UniRef50_C6PTW1 Transcriptional regulator, AraC family n=1 Tax=C... 161 1e-38 UniRef50_C5EQJ6 AraC-family transcriptional regulator n=1 Tax=Cl... 161 1e-38 UniRef50_A6D8X3 Putative uncharacterized protein n=1 Tax=Vibrio ... 161 1e-38 UniRef50_A6VR73 Helix-turn-helix-domain containing protein AraC ... 161 2e-38 UniRef50_B0SZN8 Transcriptional regulator, AraC family n=11 Tax=... 160 3e-38 UniRef50_A4BA46 Transcriptional regulator, AraC family protein n... 160 3e-38 UniRef50_A8GJ26 Transcriptional regulator, AraC family n=2 Tax=S... 160 3e-38 UniRef50_A1ZL96 Transcriptional regulator, AraC-type n=1 Tax=Mic... 159 7e-38 UniRef50_A6LX85 Transcription activator, effector binding n=2 Ta... 159 7e-38 UniRef50_B8CLS6 Transcriptional regulator, AraC family n=1 Tax=S... 159 7e-38 UniRef50_C3RPB0 AraC-family transcriptional regulator n=3 Tax=Ba... 159 8e-38 UniRef50_UPI0001BC4194 AraC family transcription regulator n=1 T... 159 9e-38 UniRef50_UPI00019685E3 hypothetical protein BACCELL_00469 n=1 Ta... 158 1e-37 UniRef50_C3RHZ9 Transcriptional regulator n=2 Tax=Bacteria RepID... 157 2e-37 UniRef50_B6ICR2 Putative transcription regulator n=1 Tax=Escheri... 157 2e-37 UniRef50_A8MJ72 Transcriptional regulator, AraC family n=1 Tax=A... 157 3e-37 UniRef50_A4B9Y7 Putative uncharacterized protein n=1 Tax=Reineke... 157 4e-37 UniRef50_C7IHL6 Transcriptional regulator, AraC family n=1 Tax=C... 156 4e-37 UniRef50_B7JL95 Transcriptional regulator, AraC family n=54 Tax=... 156 7e-37 UniRef50_B0C3V1 Transcriptional Regulator, AraC family n=5 Tax=C... 156 7e-37 UniRef50_UPI0001C368D7 AraC-family transcriptional regulator n=2... 156 7e-37 UniRef50_Q7MF47 AraC-type DNA-binding domain-containing protein ... 155 9e-37 UniRef50_A8FZF8 DNA gyrase inhibitor n=13 Tax=Gammaproteobacteri... 155 1e-36 UniRef50_A0KJN2 Transcriptional activator n=5 Tax=Gammaproteobac... 155 2e-36 UniRef50_A5V467 Transcriptional regulator, AraC family n=1 Tax=S... 154 2e-36 UniRef50_A8FAK8 Possible AraC family transcriptional regulator n... 154 2e-36 UniRef50_C6QRS7 Two component transcriptional regulator, AraC fa... 154 3e-36 UniRef50_C0A4C8 Helix-turn-helix-domain containing protein AraC ... 154 3e-36 UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostri... 153 4e-36 UniRef50_A9KR14 Transcriptional regulator, AraC family n=1 Tax=C... 153 5e-36 UniRef50_C8N9B6 AraC family transcriptional regulator n=1 Tax=Ca... 153 5e-36 UniRef50_B8I4L9 Transcriptional regulator, AraC family n=2 Tax=C... 153 7e-36 UniRef50_A7JZZ4 Putative uncharacterized protein n=3 Tax=Vibrio ... 153 7e-36 UniRef50_Q2B3U5 Transcriptional regulator (AraC/XylS family) pro... 152 7e-36 UniRef50_B7VRB4 Transcription activator n=6 Tax=Vibrionales RepI... 152 8e-36 UniRef50_C5D8H7 Two component transcriptional regulator, AraC fa... 152 1e-35 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 152 1e-35 UniRef50_Q6WFA3 Putative transcription factor Roh n=1 Tax=Entero... 151 1e-35 UniRef50_A8I184 Transcriptional regulator n=3 Tax=Rhizobiales Re... 151 2e-35 UniRef50_C6PVM8 Transcriptional regulator, AraC family n=3 Tax=C... 151 3e-35 UniRef50_A8RX40 Putative uncharacterized protein n=1 Tax=Clostri... 150 3e-35 UniRef50_B4WW69 Transcriptional regulator, AraC family protein n... 150 3e-35 UniRef50_D0YAG4 Transcriptional regulator, AraC family n=6 Tax=K... 150 4e-35 UniRef50_B5EUU0 Transcriptional regulator, AraC family n=3 Tax=A... 150 4e-35 UniRef50_Q2BBL2 Transcriptional regulator, AraC family protein n... 150 4e-35 UniRef50_C2G4Y4 AraC family transcriptional regulator n=2 Tax=Sp... 150 4e-35 UniRef50_B7DU32 Transcriptional regulator, AraC family n=1 Tax=A... 150 4e-35 UniRef50_B0C647 Transcriptional Regulator, AraC family n=1 Tax=A... 150 5e-35 UniRef50_B4WTP1 Transcriptional regulator, AraC family protein n... 150 5e-35 UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32... 150 5e-35 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 150 5e-35 UniRef50_B9MLQ2 Two component transcriptional regulator, AraC fa... 150 5e-35 UniRef50_Q17ZV7 AraC-family transcriptional regulator n=7 Tax=Ba... 149 6e-35 UniRef50_C5RQY0 Transcriptional regulator, AraC family n=1 Tax=C... 149 6e-35 UniRef50_B9YCD3 Putative uncharacterized protein n=3 Tax=Firmicu... 149 7e-35 UniRef50_C5BEG3 Transposon tn10 tetd protein (Orfr) n=2 Tax=Edwa... 149 8e-35 UniRef50_A6LY67 Helix-turn-helix-domain containing protein, AraC... 149 8e-35 UniRef50_C1I6N3 Transcriptional regulator n=1 Tax=Clostridium sp... 149 9e-35 UniRef50_A4XMF1 Two component transcriptional regulator, AraC fa... 149 9e-35 UniRef50_B0C4S9 Transcriptional Regulator, AraC family n=1 Tax=A... 148 1e-34 UniRef50_B2K4J9 Transcriptional regulator, AraC family n=34 Tax=... 148 1e-34 UniRef50_C8QFY6 Transcriptional regulator, AraC family n=3 Tax=E... 148 1e-34 UniRef50_Q8YSB8 Transcriptional regulator n=2 Tax=Nostocaceae Re... 148 2e-34 UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bactero... 148 2e-34 UniRef50_C6CRZ9 Two component transcriptional regulator, AraC fa... 148 2e-34 UniRef50_Q49JG3 LdaA n=9 Tax=Enterobacteriaceae RepID=Q49JG3_ECOLX 148 2e-34 UniRef50_UPI0001787EAC transcriptional regulator, AraC family n=... 148 2e-34 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 148 2e-34 UniRef50_UPI0001789679 transcriptional regulator, AraC family n=... 148 2e-34 UniRef50_B0MC81 Putative uncharacterized protein n=2 Tax=Clostri... 147 2e-34 UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=A... 147 2e-34 UniRef50_B2IKR9 Transcriptional regulator, AraC family n=4 Tax=R... 147 3e-34 UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=C... 147 3e-34 UniRef50_Q13QC7 Transcriptional regulator, AraC family n=5 Tax=B... 147 3e-34 UniRef50_A6UK12 Helix-turn-helix-domain containing protein AraC ... 147 3e-34 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 147 4e-34 UniRef50_C4UL45 Putative uncharacterized protein n=1 Tax=Yersini... 147 4e-34 UniRef50_A6M0I1 Helix-turn-helix-domain containing protein, AraC... 146 4e-34 UniRef50_B7LRE5 Putative uncharacterized protein n=1 Tax=Escheri... 146 5e-34 UniRef50_C6LLK3 Putative two-component response regulator n=1 Ta... 146 5e-34 UniRef50_Q18D16 AraC-family transcriptional regulator n=6 Tax=Cl... 146 5e-34 UniRef50_B8DRY5 Transcriptional regulator, AraC family n=1 Tax=D... 145 9e-34 UniRef50_D1PRZ9 DNA-bindng response regulator, AraC family n=2 T... 145 9e-34 UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=... 145 9e-34 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 145 1e-33 UniRef50_B9XAQ1 Transcriptional regulator, AraC family n=2 Tax=V... 145 1e-33 UniRef50_A5W8X4 Transcriptional regulator, AraC family n=13 Tax=... 145 1e-33 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 145 1e-33 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 145 1e-33 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 145 1e-33 UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=A... 145 2e-33 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 145 2e-33 UniRef50_B4B1U3 Transcriptional regulator, AraC family n=1 Tax=C... 145 2e-33 UniRef50_P0A9E4 Regulatory protein soxS n=98 Tax=Proteobacteria ... 145 2e-33 UniRef50_Q05587 Regulatory protein pocR n=57 Tax=Gammaproteobact... 144 2e-33 UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=A... 144 2e-33 UniRef50_B3IA10 LdaA n=1 Tax=Escherichia coli E22 RepID=B3IA10_E... 144 2e-33 UniRef50_P28816 Transposon Tn10 tetD protein n=29 Tax=root RepID... 144 3e-33 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 144 3e-33 UniRef50_D0Y1I0 Transcriptional regulator, AraC family n=1 Tax=C... 143 4e-33 UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas Re... 143 4e-33 UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacte... 143 4e-33 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 143 4e-33 UniRef50_A8RMQ2 Putative uncharacterized protein n=1 Tax=Clostri... 143 4e-33 UniRef50_B7K731 Transcriptional regulator, AraC family n=2 Tax=C... 143 5e-33 UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostri... 143 5e-33 UniRef50_C6CVD2 Two component transcriptional regulator, AraC fa... 143 5e-33 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 143 5e-33 UniRef50_C9XX01 Putative uncharacterized protein n=1 Tax=Cronoba... 143 6e-33 UniRef50_C0Z5D7 Probable transcriptional regulator n=1 Tax=Brevi... 143 6e-33 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 143 6e-33 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 143 6e-33 UniRef50_C9PI32 Arginine pathway regulatory protein ArgR repress... 143 6e-33 UniRef50_B2VKB8 Regulatory protein SoxS n=1 Tax=Erwinia tasmanie... 143 6e-33 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 143 6e-33 UniRef50_UPI0001AF3354 AraC family transcriptional regulator n=1... 143 6e-33 UniRef50_P43463 HTH-type transcriptional activator aarP n=3 Tax=... 143 7e-33 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 143 7e-33 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 143 7e-33 UniRef50_B0T953 Transcriptional regulator, AraC family n=1 Tax=C... 142 8e-33 UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clost... 142 8e-33 UniRef50_A9KM10 Transcriptional regulator, AraC family n=1 Tax=C... 142 9e-33 Sequences not found previously or not previously below threshold: UniRef50_A4SKL5 Transcriptional regulator, AraC family n=1 Tax=A... 158 1e-37 UniRef50_Q1GMI1 Transcriptional regulator, AraC family n=6 Tax=R... 157 3e-37 UniRef50_B5WD53 Transcriptional regulator, AraC family n=4 Tax=P... 156 8e-37 UniRef50_C7X8J2 Transcriptional regulator n=2 Tax=Bacteroidales ... 154 2e-36 UniRef50_Q21DM1 Transcriptional regulator, AraC family n=1 Tax=S... 154 3e-36 UniRef50_Q13JQ4 Transcriptional regulator, AraC family n=11 Tax=... 153 7e-36 UniRef50_A6TUU5 Transcription activator, effector binding n=1 Ta... 151 2e-35 UniRef50_Q7NYH2 Probable bacterial regulatory helix-turn-helix p... 150 3e-35 UniRef50_A9D6E7 Putative AraC family transcriptional regulator n... 150 5e-35 UniRef50_D1WZP5 Transcriptional regulator, AraC family n=7 Tax=A... 149 6e-35 UniRef50_B1JSX5 Transcriptional regulator, AraC family n=16 Tax=... 149 6e-35 UniRef50_B3QF69 Transcriptional regulator, AraC family n=3 Tax=R... 149 8e-35 UniRef50_C8NA30 AraC family transcriptional regulator n=1 Tax=Ca... 148 2e-34 UniRef50_Q2C165 Putative transcriptional regulator (AraC family ... 148 2e-34 UniRef50_A4SSW3 DNA gyrase inhibitor n=2 Tax=Aeromonas RepID=A4S... 146 4e-34 UniRef50_A1ZSG3 Transcriptional regulator, AraC type, putative n... 145 2e-33 UniRef50_B7VT37 Putative AraC-family regulatory protein n=1 Tax=... 144 3e-33 UniRef50_Q3BUH4 Putative transcriptional regulator, AraC family ... 144 3e-33 UniRef50_C7ILS3 Transcriptional regulator, AraC family n=1 Tax=C... 144 3e-33 UniRef50_A4XZN4 Transcriptional regulator, AraC family n=2 Tax=P... 143 4e-33 UniRef50_C5EKR4 AraC-family transcriptional regulator n=2 Tax=Cl... 143 5e-33 UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerot... 143 6e-33 >UniRef50_P77601 Putative HTH-type transcriptional regulator ykgA n=49 Tax=Enterobacteriaceae RepID=YKGA_ECOLI Length = 239 Score = 265 bits (678), Expect = 8e-70, Method: Composition-based stats. Identities = 239/239 (100%), Positives = 239/239 (100%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP Sbjct: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 Query: 61 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW Sbjct: 61 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 Query: 121 DLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM 180 DLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM Sbjct: 121 DLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM 180 Query: 181 KNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWTQA 239 KNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWTQA Sbjct: 181 KNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWTQA 239 >UniRef50_B5XU59 Transcriptional regulator, AraC family n=33 Tax=Gammaproteobacteria RepID=B5XU59_KLEP3 Length = 289 Score = 212 bits (541), Expect = 7e-54, Method: Composition-based stats. Identities = 49/229 (21%), Positives = 94/229 (41%), Gaps = 7/229 (3%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 + Q++ +I +L+ P+S+E ++ + S + F + +PL YI+ Sbjct: 5 KASPAYVGRFQRVCRYIARHLDEPLSLEALSAIAHSSPYHFHRQFSAYTGIPLYRYIQWL 64 Query: 69 RLCRAAILVR-LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIF- 126 RL RA + ++DIAL F + +SFSR F+ F SP ++R + W + Sbjct: 65 RLRRACWRLAFNPRDKVIDIALDAGFQNAESFSRAFRTAFDQSPTQFRQQPDWAEWHRRV 124 Query: 127 PSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTD 186 P +++Q + +I+FP T I + ++ N + + R+ + +D Sbjct: 125 PKHTLQEQTSMDVNIISFPTTRIAVLQHRGSPDLVNTTAARFIAWRKT--SGLSPVATSD 182 Query: 187 IYFVSTFEPSTKSVDLLTVETF---AGTVCEYADMPKEWTTTRGLYDPT 232 + ++ +P T + + AG V E A G Sbjct: 183 TWGIAWDDPQTTPQEAFRFDICGTVAGPVGENAFGVINGEIPGGRCAVV 231 >UniRef50_D2TW49 Right origin-binding protein n=1 Tax=Arsenophonus nasoniae RepID=D2TW49_9ENTR Length = 305 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 6/229 (2%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + I++ LL WI+ +L+ P+ ++++A K+GYS+ ++Q +F+N +G YIR RRL Sbjct: 1 MDQNNIIRDLLYWIDTHLDQPLFLDNVAAKAGYSKWHLQRMFKNITQQAIGSYIRARRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 RAA+ +RLT++ +LDIAL FDSQQ+F+R FKK FG +P YR + W + P + Sbjct: 61 RAAVALRLTSRPILDIALQYRFDSQQTFTRAFKKQFGITPALYRRSEDWCATGMQPPITL 120 Query: 132 RQQQKTECRLINFPETPIFGNS--FKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 +Q+ + + G Y +E + + E K + KN ++Y Sbjct: 121 EEQKLPNVSFVTLTPKHLMGIEQTCSYILEEWSTACAEMRKHFWQYYQDKAKNIPNEVYG 180 Query: 190 VSTFEPSTKSVDLLTVETFAGTVCEYADMPKEW----TTTRGLYDPTHV 234 + S++ + TV +YAD G Y Sbjct: 181 LHRVVHSSEKDEEQTVLYITAVEPQYADNKNNLYHSIIIEGGDYARFTF 229 >UniRef50_B6XK96 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B6XK96_9ENTR Length = 310 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 64/231 (27%), Positives = 114/231 (49%), Gaps = 10/231 (4%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 M+++ ++++++ WIE NLE +S++ +A KSGY++ + Q LF+ + LG YIR RRL Sbjct: 16 TMLQESVIREIILWIEQNLESRLSLDTVADKSGYTKWHFQRLFKTQTGLALGAYIRARRL 75 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFL 130 +A+ +RLT S++DI+L FDSQQ+F R FKK FG +P EYR R W + Sbjct: 76 SCSAVALRLTNDSIMDISLRYRFDSQQTFCRAFKKQFGVTPSEYRKRTGWHIEGFRLPLR 135 Query: 131 IRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM---KNFKTDI 187 ++ + +L+ + + G + +Y ++ + E +LRR + + K ++ Sbjct: 136 ESKELEAHVQLVELKDIHLVGMTHRYTQGINEWNLKTE-ELRRQYWKNFLDKNKLVAQNL 194 Query: 188 YFVSTFEPSTKSVDLLTVETFAGTVCEYAD----MPKEWTTTRGLYDPTHV 234 Y + + T S + + + K+ G Y Sbjct: 195 YAIHGVD--TTSDEEGRFLYSTAFEENALEVIPPLTKKLMVPAGNYLQIKF 243 >UniRef50_D1UAH3 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UAH3_9DELT Length = 285 Score = 202 bits (515), Expect = 6e-51, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 95/234 (40%), Gaps = 9/234 (3%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 MR KE T+ + + + ++LE I+ +L+ P+ + D+A + +S + +F + Sbjct: 1 MRTTKEETKKD--HAERMDRVLEHIQAHLDDPMQLLDLADIACFSPYHFHRIFSGMIGES 58 Query: 61 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 + +IR+ RL RAAI ++L + DIA F++ +SF+R F +FG SP+ +R + Sbjct: 59 VKSHIRRLRLERAAITLKLGEAPVTDIAFQAGFETHESFTRAFNAMFGLSPQRFRQAHHG 118 Query: 121 DLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM 180 L + ++ E ++N E + + N + R + Sbjct: 119 TLDH--KHCNYWKEIVMEASVVNLEEMNVVFVRHTGPYKDCNHAWSTLCGWAG---PRGL 173 Query: 181 KNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVC--EYADMPKEWTTTRGLYDPT 232 N I + +P D + + E T G Y T Sbjct: 174 VNADARILALCHDDPDVTPEDKIRYDACITVAGQTEVQAPIGMKTIAGGRYAKT 227 >UniRef50_B4EY53 Right origin-binding protein n=55 Tax=Enterobacteriaceae RepID=B4EY53_PROMH Length = 300 Score = 202 bits (514), Expect = 9e-51, Method: Composition-based stats. Identities = 66/225 (29%), Positives = 109/225 (48%), Gaps = 7/225 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + I++ LL W++ NL+ P+S++++A K+GYS+ ++Q +F+ +G YIR RRL Sbjct: 1 MDQTNIIRDLLAWLDNNLDQPLSLDNVATKAGYSKWHLQRMFKEVTGQAIGSYIRSRRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 RAA+ +RLT++ +LDIAL FDSQQ+F+R FKK F +P YR D W I P + Sbjct: 61 RAAVALRLTSRPILDIALQYRFDSQQTFTRAFKKQFDRTPALYRRSDEWCAVGICPPIKL 120 Query: 132 RQQQKTECRLINFPETPIFGNS--FKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 Q + + PE + G + +E + + + + + ++Y Sbjct: 121 DPQPLPKWEYVQLPEIKLIGIEQTCSHTLEQWANACSDMRQTFWQNYITKVNTIPHEVYG 180 Query: 190 VSTFEPSTKSVDLLTVETFAGTVCEYADMPK-----EWTTTRGLY 229 + + S + D V YA + E G Y Sbjct: 181 LHHTQHSDEHEDEQRVIYTTAVEPAYASFVEDDTAYEVILEAGDY 225 >UniRef50_D1P487 Right origin-binding protein n=2 Tax=Providencia RepID=D1P487_9ENTR Length = 295 Score = 202 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 67/225 (29%), Positives = 119/225 (52%), Gaps = 8/225 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M+++ ++++++ WIE NLE +S++ +A KSGY++ + Q LF+N + LG YIR RRL Sbjct: 1 MLQESVIREIILWIEQNLESRLSLDTVADKSGYTKWHFQRLFKNQTGLALGSYIRARRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 +A+ +RLT S++DI+L FDSQQ+F R FKK FG +P EYR R W + Sbjct: 61 CSAVALRLTNDSIMDISLRYRFDSQQTFCRAFKKQFGVTPSEYRKRTGWHIEGFCLPLRE 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM---KNFKTDIY 188 ++ + + +L+ PE + G + +Y ++ + E +LR+ + + K ++Y Sbjct: 121 SKELQAQVQLVELPEINLLGMTHRYTQGINEWNLKTE-ELRKQYWRTFLDKNKLVAQNLY 179 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVCEYADMP---KEWTTTRGLYD 230 + + +++ T + A +P K G Y Sbjct: 180 AIHGVDTASEEEGRFLYSTAFN-EQDMATVPPFSKSLKVPAGNYL 223 >UniRef50_C4X304 Right origin-binding protein n=9 Tax=cellular organisms RepID=C4X304_KLEPN Length = 289 Score = 202 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 6/224 (2%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + I++ LL W+E +L+ P+S++++A K+GYS+ ++Q +F++ +G YIR RRL Sbjct: 1 MDQAGIIRDLLSWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 ++A+ +RLTA+ +LDIAL FDSQQ+F+R FKK F +P YR W + P + Sbjct: 61 KSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFSLTPALYRRSPDWSSFGMRPPLRL 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDE--EVKLRRHHLARCMKNFKTDIYF 189 + + I P T + G + Y ++ S + +Y Sbjct: 121 GEFTLPKHEFITLPPTQLLGVTQSYTCKLEEISDFRNQMRVQFWRDFLGNSPSIPPVLYG 180 Query: 190 VSTFEPSTKSVDLLTVETFAGTVCE----YADMPKEWTTTRGLY 229 + PS + D V E + T G Y Sbjct: 181 LHEPRPSLEKDDEQEVFYTTALTPEMANGHLQHAHPVTLEGGEY 224 >UniRef50_C6IVK7 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVK7_9BACL Length = 304 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 98/250 (39%), Gaps = 27/250 (10%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 Q+ + Q+ ++I+ +L H ++++ +A+ S +S+ + +F + YI K+RL Sbjct: 2 NDYQERVDQVCKYIDAHLHHKLNLDQLAELSHFSKYHFSRIFASVTGETPFAYITKQRLA 61 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWD---------- 121 RAA +R T +S+L+IAL F+S SF+ FKK FG +P E R + D Sbjct: 62 RAAAYLRETNQSVLEIALGCGFESASSFNAAFKKHFGRTPTEMREQARQDRNISQADRNR 121 Query: 122 ---------LANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLR 172 + L+R+ + + ++ P + ++ + Sbjct: 122 QEAGAAPNPYHQTVKNNLLRRVWQMQATIVELPLMEAAYVRHVGSYLETYQAWAKLGMWA 181 Query: 173 RHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGT--VCEYADMPKEW---TTTRG 227 H + + +S +P+ + + AD P E T G Sbjct: 182 AQHQ---LFPPEQSFIGISLDDPAVTEEEECRYDACVTVPDTLSRADAPPEIGFQTLPGG 238 Query: 228 LYDPTHVIWT 237 LY + T Sbjct: 239 LYAKFNFYDT 248 >UniRef50_B8FN17 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FN17_DESAA Length = 290 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 97/234 (41%), Gaps = 12/234 (5%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 +++ ++ + ++ +I+ +L+ P+++E++A+ + +S + +F PL EYIR Sbjct: 1 MSDARAYYEERIIRVQMFIQDHLDDPMTLEELAKVACFSPFHFHRIFTAMTGEPLKEYIR 60 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR-------HRDY 119 + L RAA +R +++ ++ +AL+ + + ++F+R F+ +FG PR+YR Sbjct: 61 RLLLERAAHELRYSSQPVVQVALNAGYQTHEAFTRAFRNMFGVPPRQYRTELPSRARNKA 120 Query: 120 WDLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARC 179 L + + R+ FP + E + ++ H Sbjct: 121 GSPQVFNLRILKPKGDAMDIRIEEFPPLDVVFIRHTGPYEECGIAWEKLCS---HPDVAK 177 Query: 180 MKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYA--DMPKEWTTTRGLYDP 231 +T + +P D + ++ + + ++ T G Y Sbjct: 178 ELGPETQAIGICYDDPDITEADKIRMDVCVTAPPSLSPPEGMEKQTIKGGEYAV 231 >UniRef50_C6J7H0 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7H0_9BACL Length = 301 Score = 199 bits (507), Expect = 6e-50, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 93/235 (39%), Gaps = 9/235 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +Q+ +++IE L +++ ++A+ YS + F F+ + YIRKRRL Sbjct: 1 MNQINTIQKSIDYIEERLGEGLTLAEVAKAMFYSEYHFHRTFLFFVGETMTSYIRKRRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 AA L+ + ++DIAL F S ++F+R F+K++G P E R R + L Sbjct: 61 LAAELLAHSDLKIVDIALRCGFGSHEAFTRAFRKMYGILPTECRRRGRPPYLVPRANPLR 120 Query: 132 R---------QQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKN 182 + + R+ P I G + + E D +++ + Sbjct: 121 DFVAQITYDWGEYVMQYRIEQIPAKRILGFAIQTTTEDGQNHKDIPAFWQKYMHEQWGSR 180 Query: 183 FKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWT 237 ++ T + T G + +E T + T+ I+T Sbjct: 181 VPGKLHPNVELGVCTALDEDGTFRYIIGFEVDETTEVQEGLTEYRVPAQTYAIFT 235 >UniRef50_P0ACI1 Right origin-binding protein n=101 Tax=Enterobacteriaceae RepID=ROB_ECO57 Length = 289 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 6/224 (2%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + I++ LL W+E +L+ P+S++++A K+GYS+ ++Q +F++ +G YIR RRL Sbjct: 1 MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 ++A+ +RLTA+ +LDIAL FDSQQ+F+R FKK F +P YR W I P + Sbjct: 61 KSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRL 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPD--EEVKLRRHHLARCMKNFKTDIYF 189 + E + + +TP+ G + Y + S E H +Y Sbjct: 121 GEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYG 180 Query: 190 VSTFEPSTKSVDLLTVETFAGTVCEYADM----PKEWTTTRGLY 229 ++ PS D V + AD G Y Sbjct: 181 LNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVMLQGGEY 224 >UniRef50_Q31GA4 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=Q31GA4_THICR Length = 288 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 89/229 (38%), Gaps = 7/229 (3%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 ++ + ++ ++I +L +S+E +++ + +S+ + F + + +G+++ Sbjct: 3 KQDVKHYINRMNRVCDYILAHLNDDLSVEKLSEVACFSKFHFHRQFSTYTGMTVGKFVLM 62 Query: 68 RRLCRAAILVRLTA-KSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIF 126 +RL +A+ + ++DIAL HF+S ++FSR FK FG +P ++R W Sbjct: 63 QRLKQASKQLAFNQPMRVIDIALEAHFESPEAFSRAFKNTFGQTPSQFRQSPNWHTWRAQ 122 Query: 127 PSF-LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKT 185 + +I + L+ F T I + E S + K R+ Sbjct: 123 YALPIIERNIVMNIDLVEFDHTLIAVLEHRGPAEKIEDSLNIFRKWRKT--TPYSPVANH 180 Query: 186 DIYFVSTFEPSTKSVDLLTVETFAGT---VCEYADMPKEWTTTRGLYDP 231 + + +P T + A + + A G Sbjct: 181 KSFGLVYDDPDTVEPAKFRFDLCAEVKETIPDNAQGLINKAIPAGRCAV 229 >UniRef50_A5G790 Transcriptional regulator, AraC family n=3 Tax=Bacteria RepID=A5G790_GEOUR Length = 294 Score = 197 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 92/228 (40%), Gaps = 4/228 (1%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 Q+ L ++L I+ NL+ P++IE +A+ + S + +F + + Y+R Sbjct: 10 RPSTTNSYQERLNRVLIHIQKNLDEPLTIERLAEVACLSPFHFHRIFSAHVGETVTGYVR 69 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIF 126 + RL RAA + T +S+ D AL + +++ +F+R F++ FG SP E+R + + + Sbjct: 70 RLRLERAATRIAFTGESVTDTALGVGYETPAAFTRAFRERFGMSPSEFRGQQRETILSFA 129 Query: 127 PSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTD 186 + ++ + + F +T + + L + +T Sbjct: 130 ENSTAKEIIVMKPEMREFSKTKVLFVRRTGAY--GEAATAAWEALMGFAYKNRLMTGETL 187 Query: 187 IYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPK--EWTTTRGLYDPT 232 + + +P+ + + + + + + T G Y Sbjct: 188 MVGIGHDDPAITAEEKIRYDACVTFSGDVKPEGEVGIQTIAGGRYAVF 235 >UniRef50_B2HTR6 DNA gyrase inhibitor n=6 Tax=Proteobacteria RepID=B2HTR6_ACIBC Length = 283 Score = 197 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 94/223 (42%), Gaps = 7/223 (3%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 + + LQ + ++I+ +L+ + ++ ++Q + S+ + +F + + + ++I+ RL R Sbjct: 3 VYTQKLQLVCDYIQRHLDEDLDVDRLSQIAALSKFHFHRIFAIHVGLNVMKFIQLSRLKR 62 Query: 73 AAILVR-LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 A+ + +++IAL FDS ++F+R FK+ F +PR +R + W+ + F I Sbjct: 63 ASFQLAFEPDLKIIEIALQAGFDSPEAFTRAFKRSFDQTPRAFRDKPDWESWHQKFVFTI 122 Query: 132 -RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFV 190 + + K ++ P I S + ++ + + R+ K+ Y + Sbjct: 123 PKSELKMNVNIVERPAEKIAYLSHLGSPDKVLETAAQFIAWRKE--TGLSPVTKSKTYGI 180 Query: 191 STFEPSTKSVDLLTVETFAGTV---CEYADMPKEWTTTRGLYD 230 +P D + E + + G Y Sbjct: 181 PFADPDQTPADEFRFDIAGSIEKAVPENSYGVQTGEIPAGRYA 223 >UniRef50_B5RA11 Putative transcriptional regulator n=35 Tax=Salmonella enterica RepID=B5RA11_SALG2 Length = 285 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 74/227 (32%), Positives = 123/227 (54%), Gaps = 4/227 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M+++ I+ +LE IE NLE I IE + +GYSRR++Q F+ V +G+YIR+R+L Sbjct: 2 MMKKAIIISVLEQIEKNLEERIDIEKLVVITGYSRRSLQDFFKEKCGVSIGKYIRQRKLS 61 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 R+A L++LT++S+ DIA + FDS QS+SRE KK FG +P YR D+WDL N+ P + + Sbjct: 62 RSATLLKLTSQSVTDIAFRMGFDSVQSYSRELKKTFGVNPNNYRKADFWDLRNLRPPYWL 121 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVS 191 + + + IFG + I +N P + ++ + ++ + ++Y +S Sbjct: 122 DCDEHYQFEICQLTSKEIFGFQTSHQIA-TNDLPKKASPIKWKIIHETLRTWGENVYCLS 180 Query: 192 TFEPSTKSVDLLTVETFAGTVCEYAD---MPKEWTTTRGLYDPTHVI 235 +F+P ++ V +F G D +P G Y H + Sbjct: 181 SFKPDNTKDQVIAVSSFFGMEHNSVDGGKIPMSRVIKCGKYAKFHFV 227 >UniRef50_Q9K766 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9K766_BACHD Length = 297 Score = 193 bits (492), Expect = 3e-48, Method: Composition-based stats. Identities = 50/231 (21%), Positives = 97/231 (41%), Gaps = 5/231 (2%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M +Q+ L++IE NL+ +++E +A+ + +S + +F+ + + +YIRKRRL Sbjct: 1 MDYVVCIQRTLDYIEENLQEQMTLEQLAKIACFSPFHYHRVFQAIVGESVMDYIRKRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 AA + T + ++ IA+ + F Q+SF+R FKK++G SPR+YR+ + L Sbjct: 61 CAAERLFYTDEKVITIAIEVGFQYQESFNRAFKKIYGVSPRQYRNAKRISGPLRGKACLD 120 Query: 132 R----QQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDI 187 + K E + + P I G K + D + + + + Sbjct: 121 KKLWLGGHKMEPKFVTKPAFHIIGYELKTKNADGQNNKDIPEFWQHYLKNKLGCTIPNPL 180 Query: 188 YFVSTFEPSTKSV-DLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWT 237 + T+ + G E E + + + ++T Sbjct: 181 HKHVELGICTEFNPETGEFVYVIGMEVEKGTKAPEGMVYKSFPELEYAVFT 231 >UniRef50_Q8A6I0 Transcriptional regulator, AraC-type n=21 Tax=Bacteroidales RepID=Q8A6I0_BACTN Length = 285 Score = 192 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 90/230 (39%), Gaps = 6/230 (2%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 ++ + QK + ++E+I +L I ++ +A+ S +S + + F+ P+G + Sbjct: 2 QQKKTTKEEYQKCVNVVVEYINQHLGEDIDLKSLARISNFSPFYFHRIMKAFLGEPIGTF 61 Query: 65 IRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLAN 124 I + R AA L+R + + DIA + + S S S+ F++ +G SP EYR+ + Sbjct: 62 IVRTRTEAAARLLRYSDIPIADIAYRIGYSSPSSLSKVFRQFYGISPLEYRNNKNF---V 118 Query: 125 IFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFK 184 I +IR + + + + P + D ++++ + + + Sbjct: 119 IMKPAIIRPDLELKSEIKSIPARNVIYIRLSGDYKLNDYGGTWGRLW-QFIKEQKLPMGD 177 Query: 185 TDIYFVSTFEPSTKSVDLLTVETFAGTVCEYAD--MPKEWTTTRGLYDPT 232 + +P + L + + A T G Y Sbjct: 178 FSPLCIYHDDPKVTPAEKLRTDVCMVMPVQVAPKGDVGFKTLPAGRYAIF 227 >UniRef50_C3LC07 Transcriptional regulator, AraC family n=7 Tax=Bacillus RepID=C3LC07_BACAC Length = 296 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 94/234 (40%), Gaps = 9/234 (3%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 + +Q+ +++IE ++ ++ ++A+ +G+S + +F+ + + EY+RKRRL RA Sbjct: 4 YETQIQRSIDYIEEDVMEKQTLRNLARIAGFSESHFHRVFQALVGDTVMEYVRKRRLARA 63 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIR- 132 A + T + ++DIA F S ++F+R FKKLF +P EYR ++ + R Sbjct: 64 AYQLSHTDEKIIDIAFEHGFQSHETFTRAFKKLFQMTPSEYRKQEIETPMYYSVNVKQRK 123 Query: 133 -----QQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDI 187 + E R++N PE + G K + D + + Sbjct: 124 LNPYLGGIQMEYRIVNKPEFLMAGYELKTTSKEGKNHQDIPAFWQEYLQKDLGTTIPNRK 183 Query: 188 YFVSTFEPSTKSV---DLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWTQ 238 E + + G + R T+ ++T+ Sbjct: 184 DTSQWVELGLCTDFNLETGDFTYIIGMEVTDFENVPNEIAKRTFPAATYAVFTR 237 >UniRef50_C6BZC0 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZC0_DESAD Length = 297 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 93/234 (39%), Gaps = 18/234 (7%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 + + ++L +I+ NL+ +S E +A+ + +S + +F+ + L E++R+ RL RA Sbjct: 8 YNERMMEVLLYIQRNLDGDLSPETLAELACFSVAHFHRIFKGMVGESLKEHVRRLRLERA 67 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR-------------DYW 120 + + + ++++IAL F+S ++FSR FKK F SP ++R+ Y Sbjct: 68 SYRLCYSNTTVMEIALDAGFESPETFSRAFKKRFLVSPSDFRNNSRTMLALGGDGKIHYR 127 Query: 121 DLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM 180 NI L E + E + K+ ++ + + Sbjct: 128 PDPNIESFELDSTPHSCEVEIRTRDEIQVVFIRHVGPYPKVTKAWEKLCGWGFG---KGL 184 Query: 181 KNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEW--TTTRGLYDPT 232 + KT+ +S +P + + E P+ G Y T Sbjct: 185 FSEKTEFLGLSYDDPDITPEGKIRYDACFTVNEEVETPPEMGLQVIPGGKYAVT 238 >UniRef50_A4BA20 Transcriptional regulator, AraC family protein n=2 Tax=Gammaproteobacteria RepID=A4BA20_9GAMM Length = 313 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 91/226 (40%), Gaps = 13/226 (5%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 LQ +L IE +LE +S++ +AQ + SR + LF + + IR+ RL RAA Sbjct: 28 NDRLQDVLANIESSLEEDLSVDQLAQLTHVSRFHFHRLFSATFGLGVMTLIRRLRLKRAA 87 Query: 75 ILVRL-TAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLA--NIFPSFLI 131 + S+ +I +DS ++F+R F+K FG +P ++R + + + P + Sbjct: 88 FRLAYRAGDSITNIGYDCGYDSPEAFNRAFRKHFGLAPSDFRRSPDFSVWAQHYDPIQTL 147 Query: 132 RQQ----QKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDI 187 R Q + +I P P+ + + + + + R+ + + Sbjct: 148 RNQHMPAPLPDVTVIEMPAIPLAVMPHRGNPARLSHTLQAFIAWRK---RNGLSPSHSRT 204 Query: 188 YFVSTFEPSTKSVDLLTVETFAGTVCE---YADMPKEWTTTRGLYD 230 + + +P+ + D + E + + T G Y Sbjct: 205 FNLVYDDPNEVTDDDYRFDLACEIQGELPADFEGMESRTIPAGRYA 250 >UniRef50_Q81BV9 Transcriptional regulator, AraC family n=72 Tax=Firmicutes RepID=Q81BV9_BACCR Length = 296 Score = 189 bits (480), Expect = 7e-47, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 95/241 (39%), Gaps = 8/241 (3%) Query: 6 ELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYI 65 E ++ + + ++ ++IE N+ +SIE++A +G+S+ + +F+ ++ L Y+ Sbjct: 2 ESKQSRNEYLRRIYKVQDYIESNINDSLSIEELADVAGFSKFHFHRIFKGIVNESLSRYV 61 Query: 66 RKRRLCRAAILVRL-TAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLAN 124 + +L RA L+ T ++ DIA F FSR FK +G SP +YR+ + + + Sbjct: 62 NRLKLERATHLLTYRTDMTITDIAYHFGFTDSAVFSRTFKNYYGVSPSQYRNDNSKNCKD 121 Query: 125 IF--PSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKS-PDEEVKLRRHHLARCMK 181 + P + ++ + ++ + E + P KL + + Sbjct: 122 VRGIPQYNECKKVRGNVEIVTADNINVAYIRHIGTYEELTIAFPKMIEKLFHYAAKQNYH 181 Query: 182 NFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKE----WTTTRGLYDPTHVIWT 237 F+ + + D + T+ + + + G Y H Sbjct: 182 VFEDTKVLTIYHDHHEFTEDYHLRTSLCVTISDESTVETNDVGIMVIPSGKYAVGHFEIC 241 Query: 238 Q 238 Q Sbjct: 242 Q 242 >UniRef50_Q5WGK8 AraC/XylS family transcriptional regulator n=2 Tax=Bacillus RepID=Q5WGK8_BACSK Length = 280 Score = 189 bits (480), Expect = 8e-47, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 88/222 (39%), Gaps = 4/222 (1%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + +E+IE +L++ + +++IA + SR + Q +FR + EYIR RR+ AA + Sbjct: 1 MLDSIEYIENHLDNELLLDEIAAVACMSRFHFQRMFRMLTGYAVSEYIRNRRITVAAQEL 60 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH--RDYWDLANIFPSFLIRQQQ 135 + ++D+A+ ++S +SF++ F+++ G SP + + + I ++ Sbjct: 61 VHSKSKVIDVAMKYGYESPESFTKAFRRIHGISPSDAKKHSQSLKAYPKISFQIQLKGDV 120 Query: 136 KTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEP 195 + + +++ + G S + + + K + + Sbjct: 121 EMDYKIVEKDAFTVVGKSIRTTTIGGENNRKIAAFWNESNRNGLSKQLAKNCGPLGLLGI 180 Query: 196 STKSVDLLT-VETFAGTVCEYADMPKEWTTTRGLYDPTHVIW 236 + +P +W T + + T I+ Sbjct: 181 CIDFDKQQENLTYLIAAEKNSDQIPVDWETRQ-IPAATWAIF 221 >UniRef50_C8QBQ6 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QBQ6_9ENTR Length = 288 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 7/227 (3%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 + ++++ + L++WIE NL ++I+ I+ KSGYS+ ++Q +F+ L Y RKRR Sbjct: 3 SLTLKKQYINDLVDWIEANLTDELNIDLISLKSGYSKWHMQRMFKEMTGQTLASYTRKRR 62 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSF 129 L +A+ +RLT ++DIA+ FD+QQ+F+R FK F +P YR L + F S Sbjct: 63 LTMSAMALRLTRMPLIDIAVRFGFDNQQNFTRVFKNHFSLTPGAYRRIPELQLKD-FHSR 121 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHH--LARCMKNFKTDI 187 + Q + + RL PE + G +++ D + +H Sbjct: 122 IPTQHRWVDVRLAEKPELRLCGEVIEWECRFGEYIHDHGDVVAQHARDFVAFAGQHVNKG 181 Query: 188 YFVSTFEPSTKSVDLLTVETFAGTVCEYADMPK----EWTTTRGLYD 230 + F P S D + F ++ D+ WT GLY Sbjct: 182 WLGFQFSPGEGSADQQHISLFQALESQHGDVLPSNVVNWTGESGLYA 228 >UniRef50_Q9K6U1 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9K6U1_BACHD Length = 300 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 52/236 (22%), Positives = 99/236 (41%), Gaps = 13/236 (5%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +Q+ +++IE +L PIS+E +A + YS + LF+ + + EYI++RRL Sbjct: 1 MSYIQSVQRAIDYIETHLHEPISLEKVAAHASYSYFHFHRLFKATVGCTMSEYIKRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW----DLANIFP 127 +AA + T S++DIA ++SQ++F+R FK+ F P +YR D Sbjct: 61 KAAYALLETKASIIDIAFEYGYESQEAFTRAFKQWFNVLPGKYRQARPPVQLIDPYWAVK 120 Query: 128 SFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLR----RHHLARCMKNF 183 +F + + ++ + G + ++ ++ H L + Sbjct: 121 TFPVNATGDHKPYIVTRQPLQVVGLQLEGLSLPGGSDREQTTQVAIPSLWHQLEARIHEI 180 Query: 184 KTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYAD--MPKEW---TTTRGLYDPTHV 234 + + ++ S+ S D A E D +P+ + G Y H Sbjct: 181 ERRVDPFVSYGISSPSRDGSHFTYMACVEIEAGDVNIPQGFIQKEIKGGTYASFHY 236 >UniRef50_B1HRP5 Transcriptional regulator, AraC/XylS family n=3 Tax=Bacillaceae RepID=B1HRP5_LYSSC Length = 287 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 95/234 (40%), Gaps = 13/234 (5%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +Q+ + ++E +L I+IE IAQ+ S + Q F + + +Y+R+RRL Sbjct: 1 MSWIESIQKAINFMEDHLLENITIEQIAQEVNSSVFHFQRTFAILTDMSIADYLRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR--DYWDLANIFPSF 129 AA + T + ++D+A +++ ++F++ F+K +P E R R + Sbjct: 61 LAAQELMDTDQKIIDLAYKYGYETPEAFTKAFRKQHYVTPSEARKRQGPLKSYNRLVIQV 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHL------ARCMKNF 183 ++ + + +++ + + G Y+ + + E+ L + + + Sbjct: 121 SLKGAEPMKYKIVEKDKFQVVGVKRTYNCQDGENT--REIPLFWQEINESGFDHQLYQLN 178 Query: 184 KTDIYFVSTFE-PSTKSVDLLTVETFAGT--VCEYADMPKEWTTTRGLYDPTHV 234 +I V P+T ++ + T V + + + V Sbjct: 179 NGNINGVLGVCVPNTNQGQQGFIDYWIATNHVGDVGEDLLTMEVPASKWVVFEV 232 >UniRef50_A9KFE4 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=A9KFE4_COXBN Length = 284 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 93/225 (41%), Gaps = 7/225 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + L +++E+I +L+ +++ ++ + +S+ + LF + + L +YIR RL Sbjct: 1 MNYEYQLIKVIEFIGKHLDEKLTLAQLSDVACFSKYHFHRLFTAYTGLSLQQYIRWLRLK 60 Query: 72 RAA-ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFL 130 RAA L+ K++++IA++ F+S ++F+R FK++ G SP ++ + W L Sbjct: 61 RAAHQLIVDKDKTIIEIAINAGFESNEAFTRAFKQVCGVSPTKFISQPSWHGWEKSAYCL 120 Query: 131 IRQQQK-TECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 + + + N + E +S ++ + + +K + + Sbjct: 121 SNRGKMTMNIVIKNMQARRLAVVEHHGHPEKVGESINKLINWAKSQAMN-LKPKAGEAFG 179 Query: 190 VSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWT---TTRGLYDP 231 + +P T + + E + G Y Sbjct: 180 FAYDDPKTTEPEAFQFDLGITV-PEQLKLEGNVIEKRLPAGRYAV 223 >UniRef50_B6R4C2 Transcription activator, effector binding n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R4C2_9RHOB Length = 296 Score = 187 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 33/243 (13%), Positives = 87/243 (35%), Gaps = 10/243 (4%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 + + I + + + +++IE N+ +S+ IA + +S + +FR + ++ Sbjct: 2 RHEALQKNIYTQRINRAMDYIERNICEELSLAQIADAACFSPYHFHRIFRAMTGETVNQF 61 Query: 65 IRKRRLCRAAILVR-LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLA 123 + R+ +AA ++ + S+ D AL + F S +F+R F+ FG ++R + Sbjct: 62 TSRLRVEKAARRLKQNPSISITDAALDMGFASPSTFARSFQARFGMPASQWRRDATASVE 121 Query: 124 NIFPSFLIRQQQKT-----ECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLAR 178 ++ ++ ++ + + + + + + E Sbjct: 122 ARANETMVLERPRSSLVADKVEVGKLEPRTVAYVRRTGNFQERPEIFGEAFGTLMAWAGP 181 Query: 179 CMKNFKTDIYFVSTFEPSTKSVDLLTVETFA---GTVCEYADMPKEWTTTRGLYDPTHVI 235 ++ + +P +L+ + G + + G Y H + Sbjct: 182 RGLAHGAEMMCLFHDDPQVTDAELMRFSSCLTLRGPADVEGE-VGKMMVGGGRYACGHFV 240 Query: 236 WTQ 238 T Sbjct: 241 ITH 243 >UniRef50_B8H068 Transcriptional regulator, AraC family n=13 Tax=cellular organisms RepID=B8H068_CAUCN Length = 296 Score = 187 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 108/244 (44%), Gaps = 15/244 (6%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 MR ++++ N ++++L+ I+ +L+ +S+E +A + +SR + Q F + Sbjct: 1 MRMNQDVANN---YHARMRRVLDHIDAHLDEDLSVEVLAAVAAFSRHHFQRQFSGLYGIG 57 Query: 61 LGEYIRKRRLCRAAILVRLTAKS-MLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 + Y++ R+ RA+ + + +L IAL ++ ++FSR F++LF SP +R Sbjct: 58 VAAYVQLARMKRASYRLAFRDQDGVLGIALDSGYEGPEAFSRAFRRLFDQSPSSFRRAPR 117 Query: 120 WDLANIFPSFLIRQQQKT------ECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRR 173 W+ + S L++ +++T + R+++FP+TP+ + D + + + RR Sbjct: 118 WEPWHAAQSPLVQARRQTMTFTDDDVRIVDFPDTPVAVMRHEGDPALLGDTIRRFIAWRR 177 Query: 174 HHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVC--EYADMPKEWTTTRGLYDP 231 A + + + V +P + ++ A T D G Sbjct: 178 ---AAGLPPRVSATFNVFHDDPDDTPAEQYRLDLCAATARVASNPDGVTSGVIPGGPCAV 234 Query: 232 THVI 235 I Sbjct: 235 LRQI 238 >UniRef50_Q72FD7 Transcriptional regulator, AraC family n=3 Tax=Desulfovibrio vulgaris RepID=Q72FD7_DESVH Length = 326 Score = 186 bits (473), Expect = 5e-46, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 84/264 (31%), Gaps = 40/264 (15%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 + + + +L++ I NL P+++E++A S +S ++ +F M L +IR Sbjct: 3 RADTLHRYESRVNRLIDHIVNNLSGPLTLEEMAAVSSFSPFHLHRIFSTVMGETLAAFIR 62 Query: 67 KRRLCRAAILVR-LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANI 125 + R+ RAA+L+ +S+ DIA + F S Q+ +R F + G P YR + + Sbjct: 63 RVRIERAAVLLLWNPTRSVTDIAFACGFSSSQNLARAFTRHMGMPPGVYRRCRREEGCGL 122 Query: 126 FP------------------------------------SFLIRQQQKTECRLINFPETPI 149 P L+ + + R+ P + Sbjct: 123 TPAGAGNDDNGKNGNAGGMGLWHGGDAAGASGHHLHLAHSLLERSATMDVRIEEMPRFHV 182 Query: 150 FGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETF- 208 + P + ++ VS +P + + Sbjct: 183 AYLRHVGPYTEATIGPVWGRLMEWAGARGLLRP-GVKTLGVSWDDPEVTPPEHCRYDACI 241 Query: 209 -AGTVCEYADMPKEWTTTRGLYDP 231 E GLY Sbjct: 242 VIAPGVEVDGGCATQEVGGGLYAV 265 >UniRef50_C4XUB5 AraC family transcriptional regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XUB5_DESMR Length = 292 Score = 186 bits (472), Expect = 6e-46, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 75/216 (34%), Gaps = 8/216 (3%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 Q+ + + +E L+ +++ DIA + +S + +F +G Y+R+ R Sbjct: 5 TRKDWQRRVLAAMRLMEARLDEELALSDIAGAAHFSPYHFHRIFVGMTGETVGAYLRRLR 64 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR-----HRDYWDLAN 124 L RAA + + + +AL F+S ++F+R F+ ++G SP +R + + Sbjct: 65 LERAAQRLCYGDQPVTTVALEAGFESPEAFARAFRAVYGVSPSAWRQASRERKGPPETPK 124 Query: 125 IFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFK 184 P + + + P + + + + Sbjct: 125 HLPPAKEFVIMELDVVIKTLPLMKVACVRHVGPYDQCEPAWASLCA---KAGPLGLFGPD 181 Query: 185 TDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPK 220 T + +P + + + +A P Sbjct: 182 TKFIGIGHDDPQITPPEKIRYDACMTVPDSFAGTPD 217 >UniRef50_C2LM40 Right origin-binding protein n=2 Tax=Proteus mirabilis RepID=C2LM40_PROMI Length = 298 Score = 186 bits (472), Expect = 7e-46, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 10/231 (4%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M+++ +++ ++ WIE NL+ +S++ IA+KSGY++ + Q LF+ + + LG+Y+ RRL Sbjct: 1 MLQENVVKDIIVWIEQNLDSRLSLDIIAEKSGYTKWHFQRLFKAYTGISLGKYVLARRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 A +R+T S+LDI+L HFDSQQ+F R FKK F +P EYR + WD++ + L Sbjct: 61 CGAYALRITRSSLLDISLKYHFDSQQTFCRAFKKQFNITPSEYRKKQGWDISELIFPALE 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEV--SNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 + K + ++ P + G + +Y+ + N + K + + T++Y Sbjct: 121 TVELKAKYEVMTLPSKELIGMAHQYNKNISAWNYDKKKFRKEFWKKFLKEIHTIPTEMY- 179 Query: 190 VSTFEPSTKSVDLLTVETFAGTVCE------YADMPKEWTTTRGLYDPTHV 234 +T S S+D T E G Y Sbjct: 180 -ATHRASAGSLDDTTYIYTTAVSKEQLTSSANISTMSNVELPNGKYLVITF 229 >UniRef50_C6IS69 Transcriptional regulator n=11 Tax=Bacteroides RepID=C6IS69_9BACE Length = 315 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 92/255 (36%), Gaps = 31/255 (12%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 ++++ + + +++++I+ +L+ P+ ++ IA+ + +S + +F + +YI++ Sbjct: 6 KSKIEYRSRINRVMDYIDIHLDQPLELKSIAEIANFSPFHFHRIFTFLIGETPIDYIQRL 65 Query: 69 RLCRAAILVRLT-AKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH----------- 116 R+ +AA +R S+ +IA S F + FSR FKK FG +P ++R Sbjct: 66 RIEKAACRLRENMDISISEIADSCGFCTVSLFSRVFKKFFGLTPSQFRKMEKPVYAQDGI 125 Query: 117 ----------RDYWDLANIFP-----SFLIRQQQKTECRLINFPETPIFGNSFKYDIEVS 161 ++ + P F I +T+ + P+ + Sbjct: 126 LFSKNGQMVSKNLTPKHVLSPQLCSVKFKISYFMETKIEVKEMPDMKAVYCRHMGAFK-- 183 Query: 162 NKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPK- 220 E ++ T V+ +PS + + + + Sbjct: 184 EIVKAYEKLIKWAEPRGLYIPNVTKSATVTHDDPSVTELSKVRQSACIIVEGDVKGEGEI 243 Query: 221 -EWTTTRGLYDPTHV 234 G Y H Sbjct: 244 GNLVIPGGKYAVGHF 258 >UniRef50_Q64RP2 AraC-type transcriptional regulator n=6 Tax=Bacteroidales RepID=Q64RP2_BACFR Length = 280 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 94/227 (41%), Gaps = 6/227 (2%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 ++ E + + +++++I +L P+ +E +A++ S + + R ++H PL YI Sbjct: 2 KSDTEEKYLQQVNRVIDYINSHLNEPLRVETLAREVCLSEYHFHRIMRAYLHEPLATYIA 61 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIF 126 ++R+ RA + +++ + +A + +++ QS S+ FK+ FG SP YR R A + Sbjct: 62 RQRVERAVMYLQMKNIRLAQVAEMVGYETPQSLSKAFKQFFGISPTAYRKRR----AERY 117 Query: 127 PSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTD 186 F +++ + ++ PE + + KLR + T Sbjct: 118 EEFSTLKKESLKPEILTEPELKLVYIRIIGRYGEEEPYIEAWRKLRDFLQINGLLTPSTR 177 Query: 187 IYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPK--EWTTTRGLYDP 231 +S +P+ + A + + T +G Y Sbjct: 178 WIGISFDDPTVTKTEQCRFYACATVEHDVSPQGAFGMKTIPQGRYAV 224 >UniRef50_C9YDH7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDH7_9BURK Length = 319 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 93/258 (36%), Gaps = 30/258 (11%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 M+ + + + +++++I+ +L+ I + +A + +S + LF +M Sbjct: 1 MQVSSAAQRSRTEYTQRMNRVMDYIDSHLDGDIDLAALADVAHFSPFHFHRLFAAWMGAT 60 Query: 61 LGEYIRKRRLCRAAILVR-LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR---- 115 LG+Y+R+RRL AA+ + T S+L++AL + F S ++F+R FK FG SP +R Sbjct: 61 LGDYVRRRRLEVAALQLAGNTRISVLEVALGVGFGSGEAFARAFKLRFGQSPSAWRAATP 120 Query: 116 ----------HRDYWDLANIFPS-----------FLIRQQQKTECRLINFPETPIFGNSF 154 + + +N+ + + + L P + Sbjct: 121 QRWAAELRGVRKPHQAESNLDQAGHSANGHHDAMSDSQSFSSMQVTLTTLPAVRVAYMRH 180 Query: 155 KYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCE 214 VS L + + +P + + + + Sbjct: 181 VGPYGVSVNQFWTGTFLPWCFAQGLLP--GASSFGRGLDDPHITAPEHCRYDAMVQVPDD 238 Query: 215 Y-ADMPKEW-TTTRGLYD 230 + A P T G Y Sbjct: 239 FVARSPASMATLPGGRYA 256 >UniRef50_A3ZMZ0 Transcriptional regulator, AraC family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMZ0_9PLAN Length = 286 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 87/229 (37%), Gaps = 7/229 (3%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 + + + ++ I+ +L+ +S+E +A + YS + +FR + +Y+R Sbjct: 1 MNATRQRYEAKILRVQLLIQHHLDEDLSLEHLAAAADYSPCHFHRIFRGIVGESADDYVR 60 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIF 126 + R+ RAA +R +S+LDIAL + S ++F+R F + FG +P +Y+ ++ + Sbjct: 61 RLRMERAAQSLRYRRRSVLDIALDAGYGSHEAFTRAFVRTFGVTPSDYQSLEHPPASIKE 120 Query: 127 PSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTD 186 RL P + + N +P ++ + + T Sbjct: 121 TLMSTVNYTAAHVRLETQPSRRLAYIRVVGKYDFENLNPA-FGRILQFAAENNLMTDCTA 179 Query: 187 IYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKE----WTTTRGLYDP 231 V +P + + + G + P T G Sbjct: 180 CVGVYHDDPDVTAPEKQRAD--VGVTVDDQFQPTGEIQVQTIPSGKCAV 226 >UniRef50_B6ICR1 Putative transcription regulator n=1 Tax=Escherichia coli SE11 RepID=B6ICR1_ECOSE Length = 294 Score = 183 bits (465), Expect = 4e-45, Method: Composition-based stats. Identities = 79/225 (35%), Positives = 123/225 (54%), Gaps = 5/225 (2%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M++ I+ +L WIE ++E I IED+ SGYSRR IQ LF+ + LG Y+++RRLC Sbjct: 1 MLQTMIINDILIWIENHIEDGIIIEDVVNLSGYSRRYIQYLFKKETGLSLGGYLKRRRLC 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 R A+ VRLT MLDIA+ L FDSQQSFSREFKK+F C P YR RDYWDL+ + P + Sbjct: 61 RGAMYVRLTTMRMLDIAVRLRFDSQQSFSREFKKVFNCPPYIYRTRDYWDLSCLCPPWEY 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVS 191 + + P+ G+ F Y+ + + +R ++ M+ + + +++ Sbjct: 121 NMTGIPKVDFVRLPQLSYSGHMFSYNENILGTRGE---AVREKNITNDMRLYSENFLYIT 177 Query: 192 TFEPSTKSVDLLTVETFAGTVCEYADMP--KEWTTTRGLYDPTHV 234 + PS K+ + + ++TF+ + + G Y T+ Sbjct: 178 YYSPSIKNSENVFIKTFSCPQENEERKCNNQNISIPAGEYLKTYF 222 >UniRef50_C1I964 Transcription activator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I964_9CLOT Length = 286 Score = 182 bits (463), Expect = 7e-45, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 88/220 (40%), Gaps = 7/220 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +Q+ ++++E ++ I+ ED+A+ S + LF + EYIRKRRL Sbjct: 1 MNYIQSIQKSIDYMENHILEDINYEDVARHVYMSNYHFHRLFSMITGITANEYIRKRRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR--DYWDLANIFPSF 129 A + ++ +LDI+L +DS +SFS+ F + G +P R ++ Sbjct: 61 MAGQEISMSDAKVLDISLKYGYDSPESFSKAFMRFHGVTPNIARRSGMKLKSFNSLVIKI 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMK----NFKT 185 + + +++ + ++ +E ++ +E++ + A T Sbjct: 121 SLEGGTVMDYKIVKKESFKLLVKVKEFRVESISEDNNEDIPNFWNECAENGVFDVLKSNT 180 Query: 186 DIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTT 225 + + S + + + D+P+ + Sbjct: 181 TNHDIYGVCKPI-SKESKYFDYGIAMKYDGGDVPEGYKVW 219 >UniRef50_A9BU22 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=A9BU22_DELAS Length = 326 Score = 182 bits (463), Expect = 8e-45, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 89/272 (32%), Gaps = 43/272 (15%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 M + + + ++L +I+ +L+ P+ +A + +SR + +F +M Sbjct: 1 MTNKPSEQASRAEYARRINRVLNYIDAHLDQPLDGAHLADIANFSRFHFHRIFAAWMGET 60 Query: 61 LGEYIRKRRLCRAAILV-RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR---- 115 LG Y ++RRL +AA + + +++L+ AL+ F S ++F+R FK FGC+P +R Sbjct: 61 LGSYAQRRRLEKAAFRLSCGSKETVLETALATGFQSGEAFARAFKLKFGCTPSAWRSTTL 120 Query: 116 -----------------------------HRDYWDLANIFPSFLIRQQQKTECRLINFPE 146 D S ++++ + R+I+ P+ Sbjct: 121 ERMKTQAAAIGQPPGSQQSNPDQVFGNLHQEDLRAFGEPQGSCHLKEEIAMDVRIIDLPK 180 Query: 147 TPIFGNSFKYDIEVSNKSPDEEVKLRRHH--LARCMKNFKTDIYFVSTFEPSTKSVDLLT 204 + P R Y + +PS Sbjct: 181 AHVAYQRLIGPYG-----PAIGQFWRGTIAPWMHSNGLSDQTCYGIGYDDPSLTPASKCR 235 Query: 205 VETFAGTVCEYADM--PKEWTTTRGLYDPTHV 234 + + T G Y Sbjct: 236 YDACVEVPAHFVASGQVDTQTLPGGRYAVARF 267 >UniRef50_Q30V01 Transcriptional regulator, AraC type n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30V01_DESDG Length = 308 Score = 182 bits (463), Expect = 8e-45, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 87/252 (34%), Gaps = 26/252 (10%) Query: 1 MRYDKELTENEMI------RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFR 54 M Y + M + + + + W+E ++ +S++D+A ++ +S + +FR Sbjct: 1 MLYTAAKGNSIMQEHAHETYRMRIMRAILWLEEHMNEAVSLDDMAAQAHFSPYHFHRIFR 60 Query: 55 NFMHVPLGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY 114 + YIR+ RL +A + + S+ DIA +++ ++FSR F+ FG SP Sbjct: 61 GVAGESVMAYIRRLRLEKAVHRLAYGSASVTDIAFDAGYEAHEAFSRAFRAQFGMSPSAL 120 Query: 115 RHRDYWDLANIFPSFLIRQQQKTE-------------CRLINFPETPIFGNSFKYDIEVS 161 R A + P+ ++ + T+ + + Sbjct: 121 RRHVRK--AGMIPAGVLGESAMTKVVAGFTLESLGLEPEVKVLAPVRVAFVRHTGPYAQC 178 Query: 162 NKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCE-YADMP- 219 + + + +T + +P + D + + A+ P Sbjct: 179 EAAWKTLCDWA---FPQGLVMAQTQFMGICYDDPEVTAPDKIRYDACISVPDNVQAEHPV 235 Query: 220 KEWTTTRGLYDP 231 G Y Sbjct: 236 AIREVEGGEYVC 247 >UniRef50_A6GKR6 Transcriptional regulator, AraC family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GKR6_9DELT Length = 306 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 87/250 (34%), Gaps = 22/250 (8%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 N ++ + + ++IE NL +S+E++AQ++ +S + L+ L ++I + R Sbjct: 3 NGEEYRRRINRAQDYIEQNLGRSLSLEEVAQQAAFSPYHFHRLYTAMTGESLYQFILRLR 62 Query: 70 LCRAAI-LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR------------- 115 L +AA V +S+ +IAL F S +F+R FK FG S EYR Sbjct: 63 LEKAAAVAVACPHRSITEIALETGFSSPATFARAFKAKFGVSASEYRGRKDRKAVGKDRN 122 Query: 116 --HRDYWDLANIFPSF--LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPD--EEV 169 +D A+ P ++ + + P+ + + + Sbjct: 123 ALRKDRNAAASTRPYLGEVMNTFPAQSINVEDHPQKQLAYLRHVGPYAGDSALFEGLWGR 182 Query: 170 KLRRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVC--EYADMPKEWTTTRG 227 + +++ + P D L + E + T G Sbjct: 183 YCAWAGPRGLLGAPNSEMVCIYHDNPEITEDDKLRISLGVTVAPGTETSGEINLLTIPAG 242 Query: 228 LYDPTHVIWT 237 Y T Sbjct: 243 KYVCARFELT 252 >UniRef50_A6FZ48 Probable AraC-family transcriptional regulator n=2 Tax=Proteobacteria RepID=A6FZ48_9DELT Length = 300 Score = 180 bits (458), Expect = 3e-44, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 86/242 (35%), Gaps = 17/242 (7%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 + + +++ L +IE +L+ + + +A+ +G S+ + FR + VP+ + Sbjct: 2 RPTETASSFYARRVERTLAFIEAHLDEALPVARLAEVAGLSKFHFHRQFRAHVGVPVARF 61 Query: 65 IRKRRLCRAAILVRLT-AKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLA 123 + + RL RAA + + +LD+ALS FDS ++F+R F+ + G SP +R W Sbjct: 62 VARLRLRRAAQQLAFSPELRVLDVALSAGFDSPEAFARAFRAVQGQSPTAFRRAPDWPRW 121 Query: 124 NIFPSFLI-------RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHL 176 + L P+ + S + RR Sbjct: 122 HAQFELPRALHHSHAAMSDAATPILRTLDPIPVAALEHRGPPATLMASVQRFIAWRRG-- 179 Query: 177 ARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFA-------GTVCEYADMPKEWTTTRGLY 229 ++ T V +P + + + + A G T G Y Sbjct: 180 SQAAPEPSTRTLGVLYDDPESVAPEDFRFDVCAELARSLDGDARAREAGVVAKTIAGGRY 239 Query: 230 DP 231 Sbjct: 240 AV 241 >UniRef50_UPI0001C36EC6 transcriptional regulator, AraC family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36EC6 Length = 292 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 83/222 (37%), Gaps = 9/222 (4%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +Q + +IE N+ + IA ++ S Q +F + LGEYIR RRL Sbjct: 1 MNWAEGIQNAINYIENNITEELDNNSIAAQACCSSYYFQKIFSLLCDMTLGEYIRNRRLA 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR--DYWDLANIFPSF 129 A + T ++DIA+ + + +SF+R F G SP E R + + Sbjct: 61 LAGSELISTDIKVIDIAMKYGYSTPESFTRAFTLFHGVSPSEARKNASSLRSFSRLTVEL 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSN----KSPDEEVKLRRHHLARCMKNFKT 185 ++ + R+I P + + + ++ ++ PD K + + Sbjct: 121 SLKGGKTMNYRIIEKPAFTVIEKAEVHRLDENDVVSSTVPDVWAKAGADGTIAQLVGMAS 180 Query: 186 D---IYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTT 224 D IY + + + A E P+ + Sbjct: 181 DREFIYGICYGNGKETYDEDTFEYSIAAICAEDTVAPEGFRI 222 >UniRef50_A6GAG6 Transcriptional regulator, AraC type n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAG6_9DELT Length = 279 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 79/228 (34%), Gaps = 18/228 (7%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 + + ++++ ++ +L+ + E +A +G S + +FR + ++R+ R Sbjct: 3 KRDPWGQRILRVVDHVQAHLDEDVDPETLADIAGLSLHHFHRVFRGLTGESVMGFVRRLR 62 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSF 129 L RAA+ ++L + +AL + S ++F+R F+ FG PR YR + ++ P Sbjct: 63 LERAAMQLKLGEAPVTQVALEAGYGSHEAFTRAFRNRFGVPPRAYREQTRVEVEVGVPRV 122 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 +R P G +L H Sbjct: 123 ELRDD----------PALTCIGLRHTGSYSECG---QTWGELMAHAAKAGWMPHVLGSVG 169 Query: 190 VSTFEPSTKSVDLLTVETFAGTVCEYADM---PKEW--TTTRGLYDPT 232 ++ +P + + L + A P G Y T Sbjct: 170 LAYDDPDITAAERLRYDACMVMEPARARALCRPPFVLRELPAGRYAIT 217 >UniRef50_Q88KW6 Transcriptional regulator, AraC family n=11 Tax=Proteobacteria RepID=Q88KW6_PSEPK Length = 289 Score = 179 bits (455), Expect = 6e-44, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 88/231 (38%), Gaps = 9/231 (3%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 +++ K + +L +I+ +LE +S+ +++ + +S + F +M VP+ Y++ Sbjct: 3 DSQHNPSYMKRFETVLAYIDSHLEGDLSVNALSRIANFSAFHFHRQFTAYMGVPVSRYVQ 62 Query: 67 KRRLCRAAILVRLTA-KSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANI 125 RL RAA + + +L+ A F+S ++F+R FK+ FG +P + W + Sbjct: 63 LMRLRRAAHQLVASPAMPILEAAFGAGFESPEAFARAFKRAFGMAPSVFAKAPNWQAWSA 122 Query: 126 FPSF-LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFK 184 + + + R++NF ET + + + ++S + R H + Sbjct: 123 VFNVPQRSRSITMQIRIVNFAETHVAALEHQGPPGLVSESVARFRQWRMH--SGQSPVAS 180 Query: 185 TDIYFVSTFEPSTKSVDLLTVETFA----GTVCEYADMPKEWTTTRGLYDP 231 + + + P T E G Sbjct: 181 SRTFGIPYDNPDTTPAHAFRFAVCGEIDEAVQPNDF-GVHERVIPAGRCAV 230 >UniRef50_A7GBT6 Transcriptional regulator, AraC family n=13 Tax=Clostridium RepID=A7GBT6_CLOBL Length = 289 Score = 179 bits (455), Expect = 6e-44, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 8/234 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M K L++ + +IE NL + ED+A+ GYS + LF + +G YIRKR++ Sbjct: 1 MDYIKSLEKAIMYIEENLNQDLKTEDVAKSIGYSYYHFTRLFEGLLGETIGNYIRKRKIT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH------RDYWDLANI 125 + A + T K ++DIAL F S ++F+R FKK++ SP EYR + + Sbjct: 61 KTAQDLIYTDKRIIDIALDFQFKSPEAFARAFKKIYDISPTEYRKNRIDVLKGNKKYIDN 120 Query: 126 FPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKT 185 I + + PE + G K ++ +N PD ++ K Sbjct: 121 ERLKHILNNITIQPVIKVIPEVKVIGIKGKTSLK-NNLLPDLWSAFNKNSSKIVNKAEPL 179 Query: 186 DIYFVS-TFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWTQ 238 Y + P+ + + + G D E + + +V++T Sbjct: 180 KYYGICENDRPTNQFGENVAYSEIVGIEVTSFDYIPEGMVAKVIPQGKYVVFTH 233 >UniRef50_Q12JT5 Transcriptional regulator, AraC family n=9 Tax=Gammaproteobacteria RepID=Q12JT5_SHEDO Length = 289 Score = 179 bits (454), Expect = 8e-44, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 88/224 (39%), Gaps = 8/224 (3%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 + ++++ +I +L+ +++ ++Q SR + LF + L YI RL RA Sbjct: 9 QLNRVKEVCSYIGQHLDEELNLTHLSQVGLLSRFHFHRLFLAATGMQLNRYILLLRLKRA 68 Query: 74 AILVR-LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFL-- 130 + + + + +LDI + FDS ++FSR FK+ F SP ++R W + + + Sbjct: 69 SFRLAFESKRKILDIGIEAGFDSAEAFSRAFKRTFQQSPSQFRSNPDWPHWHSVMTLVNP 128 Query: 131 IRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFV 190 + + +LI P + E ++ + ++ R+ + Y V Sbjct: 129 PQGDIIVDVKLIELPIQKVAQLEHSGAPEKLMETAKQFIEWRKT--TGLSPVAISRTYGV 186 Query: 191 STFEPSTKSVDLLTVETFAGT---VCEYADMPKEWTTTRGLYDP 231 +P+T + + V + T G Y Sbjct: 187 PNGDPNTMAAEDFRFRFCGSVNEAVPDNEYGVVTGTLAGGCYAV 230 >UniRef50_Q2BPM6 AraC-family transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=Q2BPM6_9GAMM Length = 292 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 83/227 (36%), Gaps = 13/227 (5%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 ++ L ++L++I +L+ + + +A+ + S + ++R + + +R+ RL Sbjct: 7 NNYRRRLCRVLDYIHNHLDQDLDVNALAEVALMSPYHFHRIYRQMANETVNATVRRLRLQ 66 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANI------ 125 +AA + + S+ IA + + S ++F R F K +G SP YR + + Sbjct: 67 KAASDLIRSNLSLDRIAKDVAYSSPEAFIRAFSKEYGESPAAYRDKRQQPIIPTEQLSVE 126 Query: 126 FPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKT 185 + ++ F T + G K D + + KL ++ + +T Sbjct: 127 LQPLSKECKTMFNVEMMEFETTNLLGYEHKGDY---MEIGNAFDKLFMFAGSKRLIGPET 183 Query: 186 DIYFVSTFEPSTKSVDLLTVETFAGTV----CEYADMPKEWTTTRGL 228 + +P + L E P+ G Sbjct: 184 RSIGIYYNDPGSVDASELRSHACISVEAPRDAEEEQDPENLQIPAGR 230 >UniRef50_Q2NSQ1 Putative right origin-binding protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NSQ1_SODGM Length = 201 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 1/188 (0%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + I+Q LL W+E +L+ P+++ +A++SGYS+ ++Q F+ +G YIR RRL Sbjct: 1 MDQAGIIQDLLSWLEGHLDTPLTLNRVAERSGYSKWHLQRKFKLATGQAIGAYIRARRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 RA + +RLT++S+ DIAL FDSQQ+F+R FKK F +P YR W ++P + Sbjct: 61 RAVLALRLTSRSVADIALQYGFDSQQTFTRPFKKQFIQTPALYRRSRKWHFLGMYPPYRF 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVS 191 + + + + G S Y + S + LR H + + T + Sbjct: 121 DSRPLPQAEFVTLQVMTLIGTSQSYTCTLEQLS-EYRTNLRSHFWRQFLAAMPTKPPVLY 179 Query: 192 TFEPSTKS 199 P +S Sbjct: 180 GLSPHRRS 187 >UniRef50_C6C946 Transcriptional regulator, AraC family n=3 Tax=Dickeya RepID=C6C946_DICDC Length = 313 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 4/207 (1%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + + L+ WIE +LE P+ I D+ KSGYS+ ++Q +F+ + LG YIR RRL +AA+ Sbjct: 10 RFIADLVGWIESHLESPLMISDVTAKSGYSKWHLQRMFKKETGISLGTYIRNRRLSQAAV 69 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQ 135 ++LT++++ ++AL FDSQQSF+R FKK FG SP YR + WD +++ PS + Sbjct: 70 ELKLTSQTIQEVALRYCFDSQQSFTRTFKKHFGTSPGHYRKQSSWDFSSLQPSLRLNVNA 129 Query: 136 KTECRLINFPETPIFGNSFKYDI---EVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVST 192 ++ P P F+Y ++ + + IY ST Sbjct: 130 VPVPEVVALPRLPANRCHFEYTQVVDDLVQVNDIARRPVLWEKACGRSHAADVSIYVSST 189 Query: 193 FEPSTKSVD-LLTVETFAGTVCEYADM 218 P + + V G + ++ Sbjct: 190 VYPDDNRIKRQVRVNYDVGVITHAEEL 216 >UniRef50_UPI0001B9EE80 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9EE80 Length = 285 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 77/233 (33%), Gaps = 12/233 (5%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + + + +IE N+ I + A+ + S + Q +F V L EYIR+RRL Sbjct: 1 MDWVQRMNEAIGYIEANITEEIDYAEAAKVACCSAYHFQRMFPFITDVTLSEYIRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR--DYWDLANIFPSF 129 AA ++ + ++D+AL +DS ++F+R F+ + G +P R I F Sbjct: 61 LAAYELQNSDIKVIDLALKYGYDSPEAFARAFQNMHGTTPTAARQAGTKLKAYPRISFQF 120 Query: 130 LIRQQQKTECRLINFPETPIFGN------SFKYDIEVSNKSPDEEVKLRRHHLARCMKNF 183 +R + R+ + G Y+ + Sbjct: 121 SMRGAAEMNYRIEEMKAFSVVGFKKQVSTQRAYEEVPFLWKDAHAEGIFDKLWNYRAHEH 180 Query: 184 KTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIW 236 + + V + P E R ++ Sbjct: 181 PIR--GILGVCADGDYGKNEYFDYIMSVVSTH--NPPEPMVLRHFPAAAWAVF 229 >UniRef50_B3QWJ9 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=B3QWJ9_CHLT3 Length = 331 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 86/259 (33%), Gaps = 37/259 (14%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 + + +++IE +L +S+E IA+ + +S + +F + L +I++ R+ + Sbjct: 15 EYICRINRAIDYIETHLSEKLSLETIAKAAFFSPFHFHRIFHGLVGETLNRFIKRLRVEK 74 Query: 73 AAILVR-LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 AA ++ +++ DIAL F + + SR FK+ F SP +R + I +F Sbjct: 75 AARMLADNPKQTVSDIALDCGFSTTSTLSRAFKETFSMSPTAWRKASSATQSKICQTFRK 134 Query: 132 RQQQ--------------------------------KTECRLINFPETPIFGNSFKYDIE 159 Q + + + + PE + + Sbjct: 135 THQPIGSARKNYVIHTSYFDRASHHQTWRIEMPKQNEIQVTVKDMPEMTVAYVRHIGAYK 194 Query: 160 VSNKSPD--EEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYAD 217 + E + ++ +T V +P+ L Sbjct: 195 SNEALFQGLFEKLMTWAGPRGLLRFPETICLSVYHDDPNITDEQKLRTSVCISVPPNTEV 254 Query: 218 MPK--EWTTTRGLYDPTHV 234 + + T G Y H Sbjct: 255 DGEVGKMTIPGGKYAVGHF 273 >UniRef50_A8G9B3 Transcriptional regulator, AraC family n=1 Tax=Serratia proteamaculans 568 RepID=A8G9B3_SERP5 Length = 292 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 5/222 (2%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M +Q+++ LL WIE NL+ P++++DIA KSGYS+ ++Q LF+ LG Y R+RRL Sbjct: 1 MYQQQVITALLAWIEQNLDQPLTLDDIAAKSGYSKWHLQRLFKELTGEILGTYARRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 AA +RLT + IA FDSQQ+F+R FKK FG P YR W + P + Sbjct: 61 AAARELRLTNHGVAFIADKYQFDSQQTFTRCFKKQFGMPPAGYRRSTDWSGLGMQPPLRL 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTD---IY 188 + +I P + G++ + + +LR+H + M +Y Sbjct: 121 MDAPLPQAEIITLPAMQLIGHTQHRSCTLGQLLHSKN-ELRQHAWRQMMPKEAETLAVVY 179 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYD 230 +++ E ++ + E A+ + +G Y Sbjct: 180 GLTSLEADSRLRGRQRMAYTLALADERAEG-ERVLIEQGDYA 220 >UniRef50_B4EVW5 AraC-family transcriptional regulator n=3 Tax=Proteus RepID=B4EVW5_PROMH Length = 304 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 10/232 (4%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 +++++LL WIE NLE P+ ++D+A KSGY++ ++Q +F+ + L YIR RRL Sbjct: 15 SSFNIEVIKELLLWIEVNLEKPLLLDDVAIKSGYTKWHLQRVFKQATGLTLASYIRGRRL 74 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFL 130 +AA +RLT +L IAL FDSQQSF+R FK +FG +P EYR D N P Sbjct: 75 TKAATELRLTKLPVLTIALRYQFDSQQSFTRRFKAVFGVTPSEYRKVDVLCSDNFQPPIN 134 Query: 131 IRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM----KNFKTD 186 +I PE+ ++ ++Y + + E +R + KNF Sbjct: 135 FEVTDLPIPNIIELPESFLYVIQYQYFCSIEDIGKLHED-IRHQFWNDFLLYTDKNFTES 193 Query: 187 IYFVSTFEPSTKSVDLLTVETFAGTVC-EYADMPKEW---TTTRGLYDPTHV 234 +S +P+T D + ++ G ++ P+ + G Y Sbjct: 194 SVLISY-QPNTLRKDKIQIDYEIGLNNLDHFTRPRGFRKKAIAGGRYVRFQF 244 >UniRef50_C6CRA3 Transcriptional regulator, AraC family n=8 Tax=Bacillales RepID=C6CRA3_PAESJ Length = 297 Score = 177 bits (448), Expect = 4e-43, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 85/232 (36%), Gaps = 10/232 (4%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 M +Q + +IE L+ +S+E IA ++G+S + Q LF + EYIRKRRL Sbjct: 10 RMEHYTRIQYAITFIEEQLQEALSLEAIAIRAGFSLYHFQRLFHAITGFTVQEYIRKRRL 69 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSF- 129 RAA +R+T ++LDI++S + SQ++F+R F FG +P +YR + Sbjct: 70 SRAAEELRVTRHTVLDISVSYQYGSQEAFTRAFAGYFGMAPAQYRKHQPLLALRLPIDLV 129 Query: 130 -----LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFK 184 + + +I P T I G ++ ++ + Sbjct: 130 ALTANIRGGLTMYKPDIIERPATRIIGYNYPTNLNNERYFEEIPGFYAHFGNHEYFMRIP 189 Query: 185 TDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKE----WTTTRGLYDPT 232 + + G +E G Y Sbjct: 190 NKARPAFAYGIPHGYGEDGAFSFLIGEEVTSFAEVEEGFACLELPSGKYAAF 241 >UniRef50_A8UPH5 Transcriptional regulator, AraC-type n=3 Tax=Flavobacteriales RepID=A8UPH5_9FLAO Length = 287 Score = 177 bits (448), Expect = 4e-43, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 88/229 (38%), Gaps = 4/229 (1%) Query: 6 ELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYI 65 E + ++ Q+ L +++++I NL+ I I +A+ S +S + + R + P+G YI Sbjct: 3 EQSTSKNYYQQNLNRVIDFIHNNLDSKIDIALLAELSHFSPYHFHRITRALLGEPIGAYI 62 Query: 66 RKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANI 125 + R+ AA L+R + S+ IA + F++ S S+ FK FG SP +R++ + + Sbjct: 63 TRARIETAAKLLRYSENSIEQIAYKVGFETPSSLSKAFKNHFGISPSAHRNKKEFIIKKQ 122 Query: 126 FPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKT 185 K + ++++ + + + + E A+ + Sbjct: 123 NIMKTKELNIK-KPKIVDLEDQKCLYYTMHGAYQTLDYGSAWEKLWGEVK-AQKLFTKGI 180 Query: 186 DIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWT--TTRGLYDPT 232 + +P D + + + G + Sbjct: 181 KHIGLPYDDPKITEADKIRYDACLIIHKDAKPNGDVGVKELKGGKFAVF 229 >UniRef50_A6W3J7 Transcription activator effector binding n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3J7_MARMS Length = 286 Score = 176 bits (447), Expect = 5e-43, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 96/228 (42%), Gaps = 7/228 (3%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 + +K + + ++I +L+ +++E + + +S+ + F +FM V + ++++ R Sbjct: 3 SIKYYEKRMLAVCDYIYKHLDDDLTVEALCDVACFSKYHFHRQFTHFMGVGVFKFVQILR 62 Query: 70 LCRAAILVRLT-AKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANI-FP 127 L RA+ + T K ++DIA+S FD +SFSR FKK + SP E+R + + F Sbjct: 63 LKRASYELVFTKEKRIIDIAMSAKFDHPESFSRAFKKAYLQSPSEFRRHPDLEKLGLHFH 122 Query: 128 SFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDI 187 + + +++F T I + +S + R+ + K+ Sbjct: 123 KLERQLEPYMTVDIVHFDTTKIALLKHRGSPSRIMESVAIFREWRKS--SGLSPITKSRT 180 Query: 188 YFVSTFEPSTKSVDLLTVETFAGTVCEYADM---PKEWTTTRGLYDPT 232 + + +P+ + + A + E D T G Y Sbjct: 181 FNIIYEDPAVVVAEDFRCDLAAEVMKEVDDNEYGVINSTLAGGRYAVV 228 >UniRef50_B8I706 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I706_CLOCE Length = 284 Score = 176 bits (447), Expect = 6e-43, Method: Composition-based stats. Identities = 53/218 (24%), Positives = 88/218 (40%), Gaps = 7/218 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + +++IE NL IS AQ + S + Q +F + VPL EYIR+RRL Sbjct: 1 MDWLNRMNKAIDYIESNLADKISYNKAAQIACCSTYHFQRMFSSITDVPLSEYIRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD--YWDLANIFPSF 129 AA ++ + ++D+A ++S ++FSR FKKL G P R + S Sbjct: 61 LAAFELQTSDIKVIDVAFKYGYESPEAFSRAFKKLHGVMPTSARDIGISLKAFPKMTFSI 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 I+ + R+ +FG +I + ++V L + Sbjct: 121 SIKGDTEMNYRIEQREAFNVFGV--YTEISTDQEKAFDQVPLFFKRCDDDGTTDAINNLL 178 Query: 190 VSTFEPSTKSVDLLTVETFAG-TVCEYADMPKEWTTTR 226 + T S ET +C Y +PK+ + Sbjct: 179 GRFDDNYTISALYDYSETTFKYMLCNY--LPKDLSIPS 214 >UniRef50_Q97LX8 Transcriptional regulator (HTH_ARAC-domain) n=1 Tax=Clostridium acetobutylicum RepID=Q97LX8_CLOAB Length = 288 Score = 176 bits (446), Expect = 7e-43, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 87/218 (39%), Gaps = 7/218 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + L ++E NLE I ++A + S+ +F+ + LG+YIR+R+L Sbjct: 1 MNWIGDMNNALRYVEENLERNIESGEVANAAHMSKFYFLRIFKILTGMTLGDYIRERKLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR--HRDYWDLANIFPSF 129 A + T + ++DI+ +++ ++F++ FK+L G SP E R + + + Sbjct: 61 LATKDIVSTNQKIIDISYKYGYETPEAFTKAFKRLNGISPTEARKSKNNLKAIPPLSFQV 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNK---SPDEEVKLRRHHLARCMKNFKTD 186 +++ ++ ++ I G S + + N P+ ++++ ++ Sbjct: 121 IVKGEENMNYKIETKKSFKIAGVSKRISTKEGNNFKIIPEFWDEVKKSGQCEIIEKNAGK 180 Query: 187 IYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTT 224 V + + + + + + Sbjct: 181 -LGVMGVC-TNFDCEYQEFDYLIAVEGDKIEGLDNYVV 216 >UniRef50_A9HPW1 Transcriptional regulator, AraC family protein n=1 Tax=Roseobacter litoralis Och 149 RepID=A9HPW1_9RHOB Length = 273 Score = 175 bits (445), Expect = 8e-43, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 84/221 (38%), Gaps = 10/221 (4%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 + +++++I +S++ +A + SR + +F M + IR R+ +A +L Sbjct: 3 RILRVIDYIHTQAADDLSLDQLADVAAMSRFHWHRVFTAIMGASPAQIIRSVRMHKATML 62 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQK 136 + T + IA + + + +SFSR FK ++G +P +R+ + +A Sbjct: 63 LLRTDLPIAQIAAHVGYSNDRSFSRTFKDIYGQTPTAFRNAGFPGMAP--HPNPQGVSNV 120 Query: 137 TECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEPS 196 + + + + S + D + + + + + V P Sbjct: 121 FDVDIQTTSDKRLAALSHRGDYAEGSVAYQKVATIISTGNHW---PQTRGMAGVYYDNPE 177 Query: 197 TKSVDLLTVETFAGTVCEYADMP---KEWTTTRGLYDPTHV 234 + L + AG + E +P +E T G Y H Sbjct: 178 VTPTEDLR--SHAGVLWEGGAIPDGLEEVQLTGGRYAVLHF 216 >UniRef50_C9NSU9 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NSU9_9VIBR Length = 310 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 54/245 (22%), Positives = 104/245 (42%), Gaps = 18/245 (7%) Query: 6 ELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYI 65 + TE + ++L +I ++ P+S++DIA++S +SR +Q +F+ + + Y+ Sbjct: 5 KSTERPSNVFSRISKVLSFIHQHISEPLSLDDIARQSCWSRWQLQRVFQTETGMAVATYV 64 Query: 66 RKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANI 125 R+ +L +AA + T+ ++DIAL L F S+ SFSR FK++FG SPR YR + Sbjct: 65 RELKLSQAAERLIDTSDRVIDIALELGFSSEISFSRSFKQVFGLSPRAYRKQGLRTGLRK 124 Query: 126 FPSFLIRQQQK-----TECRLINFPETPIFGNSFKYD-IEVSNKSPDEEVKLRRHHLARC 179 R ++ E R+ + E + G + + + N ++V H L + Sbjct: 125 PIQVSQRTAEEACPLFVEVRVESKNEFFLKGLHGEINGLFALNPDFQQKVPALWHRLEQT 184 Query: 180 MKNFKTDIYFVSTF-EPSTKSVDLLTVETFAGTVCEY-----------ADMPKEWTTTRG 227 + + ++ + + D +E +AG + Sbjct: 185 LPDEPERPVALTGVIDITQSHFDGSNMEYWAGVELTDDLLLPQLPSAISSELSTLVVPAQ 244 Query: 228 LYDPT 232 Y Sbjct: 245 TYAVV 249 >UniRef50_A3VBK3 Transcriptional regulator, AraC family protein n=2 Tax=Rhodobacterales RepID=A3VBK3_9RHOB Length = 278 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 94/230 (40%), Gaps = 13/230 (5%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 +K L ++L+++ NL+ +S++ +A + SR + +F P+ +IR+ RL Sbjct: 3 NDYEKRLLRVLDYVYDNLDGDLSLDTLADVAALSRFHFHRVFTAVTGEPVAHFIRRVRLH 62 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 RA + + + + ++A + +D+ +SFSR F+ FG +P E+R A P + Sbjct: 63 RAGLELLSSDAPVAEVAAKMGYDNARSFSRSFRDAFGRTPSEFR-----AHAQPVPPLRL 117 Query: 132 ---RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIY 188 + Q + ++ + P + + + + K +AR + + Sbjct: 118 GTSGETQMYDVKIEDQPARRLGVIDHRGPYI---QIGEAFEKAGSTVMARGLGPHLGAML 174 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWTQ 238 + +P + + L + AG + A L H I T Sbjct: 175 GIYFDDPENGAAEDLR--SAAGFEMDEAAEITPPLREVRLEGGKHAILTH 222 >UniRef50_C7M7E1 Transcriptional regulator, AraC family n=2 Tax=Bacteroidetes RepID=C7M7E1_CAPOD Length = 289 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 82/227 (36%), Gaps = 5/227 (2%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 + + ++ E+I +L+ I I+ +A + S + +F+ +I + R Sbjct: 5 THNDYTQRINKVAEYINGHLDTSIKIKTLANVANLSDFHFCRIFKALKGESPIAFIARLR 64 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSF 129 + AA L+R + S+ +IA ++ +++ S S+ FK +G +P +YR D+ + Sbjct: 65 IETAAQLLRYSTLSVEEIAFNIGYETPASLSKAFKNQYGITPTQYR--TNRDIYIMKKEI 122 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 + +++ + + + N + E ++ + + Sbjct: 123 NNPEVVLKAPKIVELEPKSLIYVALTGEYGTLNYNKAYEQLWGVVK-SQKLFTKGIESIC 181 Query: 190 VSTFEPSTKSVDLLTVETFAGTVC--EYADMPKEWTTTRGLYDPTHV 234 VS +P L E + + T G Y Sbjct: 182 VSYDDPKITEASLQRSEVSLAIHKPAKPSGEVSCKTLAGGKYAVFFY 228 >UniRef50_Q17ZT7 AraC-family transcriptional regulator n=4 Tax=Clostridium difficile RepID=Q17ZT7_CLOD6 Length = 306 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 92/250 (36%), Gaps = 18/250 (7%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 +++ + ++ ++IE +L P+S+++++ +G+S+ + +F+ L +Y+ + Sbjct: 4 AKSKKEYLNRICKVQDYIEEHLHEPLSLDELSNIAGFSKFHFHRIFKAIEKETLAQYVNR 63 Query: 68 RRLCRA-AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANI- 125 +L A A L+ T ++ DIA F FSR FK + SP +YR+ + Sbjct: 64 LKLENATAFLIHRTDMTVTDIAHYFGFTDSAVFSRAFKNYYKISPIKYRNNYSKNCKEPY 123 Query: 126 ----------FPSFLIRQQQKTECRLINFPETPIFGNSFKYDIE-VSNKSPDEEVKLRRH 174 P ++ K E ++ + +++ P +L + Sbjct: 124 KISQYNRSISKPKCKNTREVKGEIEILELDNMNTIYTRYTGSYGNLTSTFPKLLERLFTY 183 Query: 175 HLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEY-----ADMPKEWTTTRGLY 229 + + + + + + + T+ + D G Y Sbjct: 184 ASEQNLLGLENTQILAIYHDNPQFTQEHQLRTSICMTIPDNIVVKENDNLGNMIIPSGKY 243 Query: 230 DPTHVIWTQA 239 H +++ Sbjct: 244 LVGHFDISKS 253 >UniRef50_A8TTK0 Transcriptional regulator, AraC family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTK0_9PROT Length = 330 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 92/243 (37%), Gaps = 22/243 (9%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 + L ++L I+ NL+ +S++++A + +SR + +FR +GE++R+ + Sbjct: 34 TRSAYESRLLRVLVHIQRNLDRAMSLDELADVAAFSRFHFARIFRAMTGETVGEHVRRLK 93 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR--HRDYWDLANI-- 125 L RAA +R T +++ +IAL FD+ ++FSR FK FG P +R + + Sbjct: 94 LERAAGKLRHTRQTVTEIALDAGFDTPEAFSRTFKAQFGDPPSRFRVLRGSFRPPRSPSG 153 Query: 126 -----------FPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRH 174 F + + FP P N ++ Sbjct: 154 VHYDQDGVLRGFTPYQGADPMTLDVSTREFPTYPFAFLRHVGRY---NDIGPVFRRVAAI 210 Query: 175 HLARCMKNFKTDIYFVSTFEPSTKSVDLLTVET---FAGTVCEYADMPKEWTTTRGLYDP 231 R + T + V+ +PS L + + ++ K GLY Sbjct: 211 ADERRLFGPDTKVMMVAYDDPSVTDEQRLRSDAGVSLTDPTVDTGELIKG-EIAGGLYAV 269 Query: 232 THV 234 T Sbjct: 270 TVY 272 >UniRef50_A7FVD8 Transcriptional regulator, AraC family n=4 Tax=Clostridium RepID=A7FVD8_CLOB1 Length = 294 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 5/218 (2%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M +L LE+IE NL I+I+DI++ + SR + Q +F + + +YI+ RRL Sbjct: 1 METIMLLNNTLEYIERNLHTAINIDDISKVACSSRYHFQRVFHSLTGFTVTQYIKNRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH--RDYWDLANIFPSF 129 AA + T + ++DIAL ++S ++F++ FK+L G SP + I Sbjct: 61 LAAEELVSTDRRIIDIALKYGYESPEAFTKAFKRLHGISPSALKKLNGKIKAFPKISFQI 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKY---DIEVSNKSPDEEVKLRRHHLARCMKNFKTD 186 I+ + + R++ +FG F+ + + P+ K+ + + + Sbjct: 121 SIKGECEIIYRIVEKEAFKVFGTGFETTRINYAAYKEIPEFINKIFKDGTHDRINEALGN 180 Query: 187 IYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTT 224 + T + G ++ E+T Sbjct: 181 SKGSLLDGFHYDFKENGTRKYMMGYEIPRTEISDEFTI 218 >UniRef50_B8FSY0 Transcriptional regulator, AraC family n=6 Tax=Clostridiales RepID=B8FSY0_DESHD Length = 291 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 91/239 (38%), Gaps = 16/239 (6%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M +K L+ + +IE +L I +ED+A+ +GYS ++ F + +G YI+KRRL Sbjct: 1 MDYRKALEHAVMYIENHLGSDIKVEDVAKAAGYSYYHLNRQFTAILGESIGSYIKKRRLA 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFL- 130 AA + T + ++DIA+ F+S ++FSR FK ++ SP+ YR Sbjct: 61 DAAKKILYTNRKIIDIAMENGFESPEAFSRAFKAIYKVSPQTYRQNRLDTFIAGKERLDS 120 Query: 131 -----IRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRH-HLARCMKNFK 184 + + +++ PE + G + + + + + + + N + Sbjct: 121 GLLDHLARNVTVHPKIVELPEIKVAGLRGETTLRDNRLRELWDRANSLYIQIPNRIPNGR 180 Query: 185 TDIYF-VSTFEPSTKSVDLLTVETFAGTVCEYADMPKE----WTTTRGLYDPTHVIWTQ 238 D + AG E G Y ++T Sbjct: 181 AFGICEACAENTLYTMNDDILFTEVAGIEVSSFAGLTEPFVQKIIPGGRYA----VFTH 235 >UniRef50_B6R2M9 Transcriptional regulator, AraC family n=3 Tax=Rhodobacteraceae RepID=B6R2M9_9RHOB Length = 283 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 91/225 (40%), Gaps = 7/225 (3%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 +N+ +K + ++LE+I NL+ +S++ +A + SR + +F++ L IR+ Sbjct: 5 QNKAAYEKRMLRVLEYIYNNLDGDLSLDALADVACMSRFHWHRVFQSMRGETLATSIRRI 64 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPS 128 RL RAA+ + + + + +IA + S QSFSR FK +G +P ++R Y P+ Sbjct: 65 RLNRAALDLIQSKQPITEIAEQYGYPSAQSFSRAFKGEYGMAPGQFRESKY-----AAPT 119 Query: 129 FLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIY 188 ++ + E P + + KL +R + I Sbjct: 120 LETEKESIFSMHPVEIKEVPERSLQALFHRGSYFEMGVVFSKLAAMLSSRGVIRKCGPIV 179 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVCEYA--DMPKEWTTTRGLYDP 231 + +PS +D L A +A + + G Sbjct: 180 GIYYDDPSLVPLDELRSHVGAVVPQNFANTEGLEPLVIPGGRCAV 224 >UniRef50_B7GST4 Transcription activator, effector binding n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GST4_BIFLI Length = 286 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 53/234 (22%), Positives = 98/234 (41%), Gaps = 11/234 (4%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M R L++ + +IE +L I + ++++++GYS + LF + + +G YI +RRL Sbjct: 1 MKRYPPLERAITYIEAHLNEYIGLNEVSRETGYSYYYMTRLFSSVLGESVGHYINRRRLY 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 A+ + + + ++DIAL ++S ++FSR FK +FG SP YR + Sbjct: 61 NASEKLIHSDQKVIDIALDCGYESSEAFSRAFKAVFGYSPVAYRKAGLDLVIKAKKELAP 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDI---- 187 + + P+ + G + + + D ++ K+F T Sbjct: 121 EDVCHIANHISHAPKIILLGETEVAGLRGTTSLSDNQLPGLWEQFHGLNKDFFTTSAGYG 180 Query: 188 YFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEW---TTTRGLYDPTHVIWTQ 238 + TK D L G V ++ +P E T G Y ++T Sbjct: 181 ICETQKTAYTKDGDALYSVMIGGPVKDFDCLPLELAKKTLRAGRYA----VFTH 230 >UniRef50_B2TL55 Transcriptional regulator, AraC/XylS family n=2 Tax=Clostridium botulinum RepID=B2TL55_CLOBB Length = 282 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 84/229 (36%), Gaps = 9/229 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + +E+IE N+ + IE +A+ + S + Q ++ V + EY+R+RRL Sbjct: 1 MDWLDSMNKAVEYIEDNITEKLDIEKVAKIALSSPFHFQRMYHVITGVTIVEYVRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR--HRDYWDLANIFPSF 129 AA + + + ++++A +++ ++F++ F++++G SP R + + Sbjct: 61 LAAQDII-SGEKIINVAYKYGYETPEAFTKAFRRMYGMSPSAAREPEANLKAYPKLSFHI 119 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLR--RHHLARCMKNFKTDI 187 I+ + +++ + G + + + K Sbjct: 120 SIKGDKDMNYKIVEKESFRVVGKQTRITMVDGENFEQVPEFWNNCMKDGSYNWICSKVGK 179 Query: 188 YFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIW 236 V + G E D + + + T I+ Sbjct: 180 LGVLGICKDFGKDE---FNYMIGVE-EIKDSIPKGYVSATIPAATWAIF 224 >UniRef50_A9GLA7 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLA7_SORC5 Length = 346 Score = 173 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 87/259 (33%), Gaps = 32/259 (12%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 + Q+ + +++++I+ + +S++ +A + +S + +F++ L E+I++ Sbjct: 31 RSRAEYQRRVNRVIDYIQAHRAEDLSLDTLAAVAAFSPFHFHRVFKSMTGENLREFIQRT 90 Query: 69 RLCRAA-ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFP 127 RL AA LV+ +L+IAL F S +F+R FK+ FG S +R+ D N Sbjct: 91 RLETAASHLVQRPHADILEIALENGFSSASAFARAFKERFGMSASAWRNGGATDERNARQ 150 Query: 128 SFLI-----------------------------RQQQKTECRLINFPETPIFGNSFKYDI 158 + +++ + P + Sbjct: 151 ADRKPGQVERNPCKAAACAPDQDASSSGTDARQDEEEIMNVTVKTLPSYHVAYVRNVGPY 210 Query: 159 EVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADM 218 + +L R AR + ++ P ++ ++ Sbjct: 211 GPEGSVGEAWQRLVRWASARDLWTPDRICLSIAHDNPKVTEPAKCRLDAAIVIPQDFKAD 270 Query: 219 PK-EWT-TTRGLYDPTHVI 235 T G Y + Sbjct: 271 GDVNVTDIAGGKYAAGAWV 289 >UniRef50_C8P1I3 AraC family transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1I3_ERYRH Length = 288 Score = 173 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 92/231 (39%), Gaps = 7/231 (3%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 M + LQ +++IE +L+ + +EDIA S YS + LF + + +Y+R+RR Sbjct: 5 RNMNTLEHLQNAIDYIETHLDSSLKLEDIAIHSNYSPYHFHNLFSALTGMGVMDYVRRRR 64 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY--RHRDYWDLANIFP 127 L A +L ++D+A+ ++S +SFS+ FKK +P E R I Sbjct: 65 LSEAGMLFISQKVKVIDLAVHYDYESAESFSKAFKKQHHYTPSEIKKRKGSLQTTFPIKI 124 Query: 128 SFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLAR---CMKNFK 184 + + K + R+ I G + E +E+ + + + + FK Sbjct: 125 THNQKGAVKMKMRIEEKESVNIAGYQKTFSYENGANL--KEIPMFWDEINQSAKDLDLFK 182 Query: 185 TDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVI 235 + + + + + GT C++ + + + + Sbjct: 183 MNDHKIEGIVGLCQQASDGFMTYLIGTSCDFQEGLVNVELPKSRWLVFDAV 233 >UniRef50_C6CRY2 Transcriptional regulator, AraC family n=69 Tax=Bacillales RepID=C6CRY2_PAESJ Length = 301 Score = 173 bits (438), Expect = 6e-42, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 96/237 (40%), Gaps = 11/237 (4%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 + +QQ +++IE ++ +S+ +AQ + S + +F++ + EY+RKRRL Sbjct: 2 KQDYLAQIQQTIDYIEAHISEELSLSRLAQVAKLSDFHFHRVFQSMAGETVMEYVRKRRL 61 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFL 130 +A V + ++DIAL F + ++F+R FK++F +P EYR R+ A + L Sbjct: 62 AISAYQVANSDAKLIDIALDTGFQNHETFTRAFKRMFEMTPAEYRKREIKPPAYSRLNVL 121 Query: 131 IR------QQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFK 184 R + E ++I P + G + + + + + KN Sbjct: 122 QRKYNPYLGGIRMEYKIITKPAFKVIGYEIRTR-ANGDNHKEIPAFWQEYIQKELYKNIP 180 Query: 185 TDIYFVSTFEPSTKSV---DLLTVETFAGTVCEYADMPKEWTTTRGLYDPT-HVIWT 237 ++ S E + G E D + +D + ++T Sbjct: 181 NRVHKESPVELGICYNFDMGSDSFSYLIGMEAESFDGVEGEGLVCREFDGAEYAVFT 237 >UniRef50_A9KRP2 Transcriptional regulator, AraC family n=7 Tax=Bacteria RepID=A9KRP2_CLOPH Length = 292 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 90/239 (37%), Gaps = 15/239 (6%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M K +++++IE NL+ IS + I+Q +G S N Q +F PL EYIR RRL Sbjct: 1 MDWIKKFNEVIKYIEDNLKGEISYDTISQIAGCSIYNFQRMFSYIADKPLSEYIRNRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR--DYWDLANIFPSF 129 AA + + ++DI+ ++SQ +FSR F+ G P R+ + Sbjct: 61 LAAFDIMNSKDRIIDISFKYGYESQDAFSRAFRSFHGVLPSAARNETVQLKSCPKLSFQI 120 Query: 130 LIRQQQKTECRLINFPETPIFGNS--------FKYDIEVSNKSPDEEVKLRRHHLARCMK 181 I+ + +++ FP + G + FK ++ + + R L + Sbjct: 121 NIKGENYMNYQIVQFPAFKVVGITNRINTSEAFKIVPQIWENAWKDGTMNRFIELLKKTD 180 Query: 182 NFKTDIYFVSTFEPSTKSVDLLTVETFA----GTVCEYADMPKEWTTTRGLYDPTHVIW 236 + S ++ + C Y P T V++ Sbjct: 181 YRPAGFLGICADGKWGNSEEMDYILAITNHVDVPECNYVSPPDGMK-EFCYPASTWVVF 238 >UniRef50_C1FU00 Transcriptional regulator, AraC family n=8 Tax=Firmicutes RepID=C1FU00_CLOBJ Length = 290 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 88/231 (38%), Gaps = 5/231 (2%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 L + +M + L + +IE N+ I +E++++ + S + Q +F +PL EYIR Sbjct: 2 LGDEDMEWIERLNSAVNYIEKNIRETIDLEEVSKIACCSTYHFQRMFAYIADIPLSEYIR 61 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD--YWDLAN 124 +RR+ AA+ ++ + ++DI+L +DS +F+R FK + G +P + Sbjct: 62 RRRMSLAAVDLQSGNEKVIDISLKYGYDSPTAFNRAFKSVHGIAPSRAKEEGTILKAFPP 121 Query: 125 IFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFK 184 I IR + R+ I G S + E+ + + Sbjct: 122 ISFKITIRGDIEMNYRIEKKDSFRIVGISEPLETEMEKNFETVPKMWGTAAMNGTIPRLA 181 Query: 185 TDIYFVSTFEPSTKS---VDLLTVETFAGTVCEYADMPKEWTTTRGLYDPT 232 + + S +D + + +E+ L+ Sbjct: 182 AMMDGIPMGLLGVSSCNNLDNWRYYIAVASSQPIENGLEEYIVPSSLWAIF 232 >UniRef50_A3Y825 Transcriptional regulator, AraC family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y825_9GAMM Length = 289 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 87/229 (37%), Gaps = 16/229 (6%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + L+ L +IE NL+ +SIE I+ + G S+ ++ F+ + + L E I RL RAA Sbjct: 3 EKLKAALNYIESNLDKSLSIESISTQVGMSQSHLHRKFKAELGLSLYELIILLRLKRAAY 62 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLAN-------IFPS 128 + ++DIA H+ S Q+F+R F+K+F +P +R R W Sbjct: 63 QLAYRQTKVIDIAFEAHYKSHQAFTRAFQKVFKQAPSAFRKRANWFFWQQKYDPFLALRK 122 Query: 129 FLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIY 188 + LI F I + K ++S + RR AR + K+ + Sbjct: 123 INMNDNTCFNVELIEFHTLSIAYLTHKGHPNQLHRSIQTFIDWRR---ARALPPHKSRTF 179 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVC------EYADMPKEWTTTRGLYDP 231 + +P + + + +G Y Sbjct: 180 NLLYHDPKRVEPEDYRFDIACEFKASALSKLDRDANIAMLDIPQGRYAK 228 >UniRef50_A8FAK9 Transcriptional regulator n=3 Tax=Bacillus RepID=A8FAK9_BACP2 Length = 290 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 97/238 (40%), Gaps = 11/238 (4%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +Q +E+IE NL++ ISI++I+ KS +S + Q LF+ + EYIR RRL Sbjct: 1 MDYYERIQHSIEFIEENLQNNISIKEISSKSCFSAFHFQRLFQAITGFSVQEYIRNRRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH-----RDYWDLANIF 126 AA L++ T +++L IA++ + SQ++F+R F + FG +P +R + + + Sbjct: 61 EAARLLKETKQNVLHIAIAFQYGSQEAFTRAFVQFFGVTPGRFRKEGVMLKKQNKMDFLA 120 Query: 127 PSFLIRQQQKTE-CRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKT 185 + + + I G ++ +++ D + + + Sbjct: 121 YQSKLDSELNMNKPVITQLGNFYIIGYEYQTNLQNEEYFTDIPLFYMDFGKKEYYQQIQK 180 Query: 186 DIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKE-----WTTTRGLYDPTHVIWTQ 238 I + ST D G E D+ G Y V + Sbjct: 181 KIAPHMAYGISTSFQDDGHFSFVVGEEVEDFDLELNEGFVKIVIPEGKYAEFKVSGSH 238 >UniRef50_C1DQ04 Transcriptional regulator, AraC family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DQ04_AZOVD Length = 325 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 81/223 (36%), Gaps = 8/223 (3%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 ++ + + + IE E P +E IA + S Q F+ M GEY+R+ RL Sbjct: 47 RLLEDTRIVKAIRLIESTTEEPFPLERIAAHANLSASRFQRRFQEAMGESPGEYLRRTRL 106 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFL 130 RAAI + ++ +S+L IALS + S ++F R F + FG P +YR + P Sbjct: 107 DRAAIFLIISQESVLSIALSTGYASHEAFIRAFHRQFGLVPTQYRQFARRASTPLAPE-- 164 Query: 131 IRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFV 190 + + + R+ +FP P+ F + D + + Sbjct: 165 -DEPRVAQVRVESFPSQPVLAMRFYGSYALVE---DNWRRFAECLDRAGFPLADAQAVGI 220 Query: 191 STFEPSTKSVDLLTVETFAGTVCEYADMP--KEWTTTRGLYDP 231 P DL+ + + P + Sbjct: 221 VQDNPEITPNDLVRYDCAIVDAGFDREHPALSRLILPAARFAC 263 >UniRef50_B3CE13 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CE13_9BACE Length = 283 Score = 170 bits (431), Expect = 4e-41, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 86/225 (38%), Gaps = 2/225 (0%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 E Q+++ Q++++I +L +++E +A + S + LF++ + L YI ++ Sbjct: 4 ETTYGHQELINQVIDYIHTHLHKALTLEMLAAEMHMSVYHFHRLFKSHLQETLSAYITRQ 63 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPS 128 R+ RA + ++ S+ +++ + +D+ QSFS+ FK+ FG SP + + ++ P Sbjct: 64 RMERAVMYLQTRDLSLQELSEKMGYDTAQSFSKAFKRYFGVSPVAFGNTLTFNTPETTPI 123 Query: 129 FLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIY 188 I E ++ I KL +++ T + Sbjct: 124 EDIAFIGLDEPEVLLISPMYIAYIRIIGPYGEKESYELGWGKLCGFLKENKLQSKATRWF 183 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVCEYADM--PKEWTTTRGLYDP 231 +S +P+ A T G Y Sbjct: 184 GISFDDPTITKKKQCRFYACASVAQRIKPSGAIGTLTIESGKYAV 228 >UniRef50_B7HW35 Transcriptional regulator, AraC family n=34 Tax=Firmicutes RepID=B7HW35_BACC7 Length = 281 Score = 170 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 88/235 (37%), Gaps = 17/235 (7%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + LE+IE +L+ I + IA+ + S + +F + V L EYIR+RRL Sbjct: 1 MDWLERMNNALEYIENSLDEDIDYKKIAKAASCSEFHFSRMFSSISGVSLSEYIRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR--DYWDLANIFPSF 129 AA ++ ++D+A+ + S +FSR FKK+ G +P R++ I Sbjct: 61 LAAFEIQKGDIRIIDVAIKYGYVSSDAFSRAFKKMHGITPSNARNKGVQLKAFPKISFQI 120 Query: 130 LIRQQQKTECRLINFP-ETPIFGNSFKY-DIEVSNKSPDEEVKLRRHHLARCMKNFKTD- 186 I+ + E R+ N E I G S K P ++ + + + + Sbjct: 121 SIKGDTEMEYRIENLDFELRIVGKSKSVKTSSAFKKIPTLWNNAKKDGFMQELIDMSWED 180 Query: 187 -------IYFVSTFEPSTKSVDLLTVETFAGT--VCEYADMPKEWTTTRGLYDPT 232 + V + + + F G E + + Sbjct: 181 PKCKLESLLGVCGKDAAITDEE---FSYFMGVRYDGEVPTDMETLVIPVSTWAVF 232 >UniRef50_A6LYZ8 Transcription activator, effector binding n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYZ8_CLOB8 Length = 290 Score = 169 bits (429), Expect = 6e-41, Method: Composition-based stats. Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 11/232 (4%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M ++I+ + + +IE NL P+++E +A YS + F+ M +G YIR RRL Sbjct: 1 MKDKQIIGRAIIFIETNLYEPLTVESVASAVSYSYYHFHRYFQVVMGETIGSYIRSRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 +AA + + K +LDIA+ L+F+S +SF+R FKK +G +P EYR L I Sbjct: 61 QAAYNLVHSKKRILDIAILLYFESAESFTRAFKKRYGITPMEYRENGIDVLIGNHNPMQI 120 Query: 132 RQQQK-----TECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTD 186 + + + ++ F + G + IE +N E + + + Sbjct: 121 DKITESNYANLQPEIVTFQPKCVVGFRYYMSIEKNNSIEMWEKLNAQLEKQKYISMNNNR 180 Query: 187 --IYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEW----TTTRGLYDPT 232 IY S F G + E + G Y Sbjct: 181 YSIYETSGTCLQNTFNKNSETTLFIGIETSDDNNIPEGMELKEISGGKYAKF 232 >UniRef50_A1ZNF5 Transcriptional regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZNF5_9SPHI Length = 469 Score = 169 bits (429), Expect = 6e-41, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 98/250 (39%), Gaps = 22/250 (8%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 M DK TE + + +L++IE NLE +S+E +++K+ YS + +F + Sbjct: 1 MNADKARTE----YIRRVNFVLDFIEKNLEADLSLESLSKKAYYSPYHFHRVFSTIVGEN 56 Query: 61 LGEYIRKRRLCR-AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY----- 114 L +Y+ ++R+ R A+IL+ + + ++A F+S+ SFSR FKK +G SP + Sbjct: 57 LNQYVNRKRIERIASILLIRSDTPIKELAYIYGFNSESSFSRAFKKYYGISPTRFKLEGK 116 Query: 115 ---RH---RDYWDLANIFPSFLIRQQQKTECRLI--NFPETPIFGNSFKYDIEVSNKSPD 166 R + I I++ + +++ E + G + + + Sbjct: 117 NTLRKIGIEFFTTEKYICSIDHIKKWIEMNAQIVITELQEIKLAGVMHIGEFDKAGNMFQ 176 Query: 167 EEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTT-- 224 ++ R + + P+ L T + + Sbjct: 177 RLMEWGAKK--RVLATSDFKAITIYHDNPNVTQTSKLRFSTCITISEDINADGEIRPINL 234 Query: 225 TRGLYDPTHV 234 +G+Y H Sbjct: 235 KKGIYAVGHF 244 >UniRef50_A6UD97 Transcription activator effector binding n=14 Tax=Proteobacteria RepID=A6UD97_SINMW Length = 279 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 88/222 (39%), Gaps = 4/222 (1%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + + + +IE + IS++DIA +G SR ++ +F + YIR RRL AA+ + Sbjct: 4 IARAIWFIESHFAEDISLDDIAAAAGLSRYHLSRVFGLSAGRSISAYIRGRRLSGAALDL 63 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKT 137 +L++AL + S ++F+R F++ FG +P R + + ++ + + Sbjct: 64 ANGTSGILEVALEAGYGSHEAFTRAFREQFGVTPESIRKQGHVRNIDLLEPIRMDDTRTL 123 Query: 138 ECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEPST 197 + F E+P G E + + E + + N + + Sbjct: 124 KIEPPRFEESP--GLLLAGLAETYDYNRTEGIPSLWQRFSAYFGNIPGQRGNTAYGVCTQ 181 Query: 198 KSVDLLTVETFAGTV-CEYADMPKEWTTTRGLYDPTHVIWTQ 238 + A + +P ++T R L + I+ Sbjct: 182 SDGEAGRFRYMAAAEIRDNEALPAGFSTLR-LPRQRYAIFVH 222 >UniRef50_Q18AY3 AraC-family transcriptional regulator n=15 Tax=Bacteria RepID=Q18AY3_CLOD6 Length = 288 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 87/231 (37%), Gaps = 9/231 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M L Q + +IE NLE + + A+ + S + Q +F VPL EYIR+RR+ Sbjct: 1 MEWINKLNQAITYIEENLESGVDYAEAAKIACCSTFHFQRMFSYIAEVPLSEYIRRRRMT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD--YWDLANIFPSF 129 +AA ++ + +L+++ +DS SF+R F+ + SP R + + S Sbjct: 61 KAAFELQNSNIKILELSEKYGYDSPTSFNRAFQNIHNISPSAARAKGVVLKAYPKMTLSI 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRR----HHLARCMKNFKT 185 ++ + + R++ I G ++ V + + + + Sbjct: 121 YVKGNIEMQYRIVEKKGFRIVGIKESMNMIVEECFEKVPKLWAKCIKNGTIDKLSELINN 180 Query: 186 DIYFVSTFEPSTKSVDLLTVETFAGTVCE-YADMPKEWTTTRGLYDPTHVI 235 + + T S L A + + E+ G + + Sbjct: 181 EPCGLLGVSVCTNSKGLDY--YIAAPTDKPVLEDTHEYLIPSGTWAVFECV 229 >UniRef50_B1KWH9 Transcriptional regulator, AraC family n=2 Tax=Firmicutes RepID=B1KWH9_CLOBM Length = 302 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 88/242 (36%), Gaps = 13/242 (5%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 + + +L ++IE NL ++E +AQ SG+S+ + +F++ + +Y+ + +L Sbjct: 7 KQEYINRIYKLQDYIENNLYETHTLEKLAQVSGFSKYHFHRIFKSATKETVFQYVTRTKL 66 Query: 71 CR-AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSF 129 A+ L+ S+ D+A F FSR FKK + SPRE+R + + + Sbjct: 67 ELVASTLIARPDLSITDVAYQFGFSDSAVFSRTFKKYYDMSPREFRKQYNNNCKDYLLET 126 Query: 130 LIRQQQKTE-------CRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM-K 181 + + + ++I P+ + + D KL + + + Sbjct: 127 IYTKNVNSNVNTVKGDVKIITMDSLPVIYIRKIGAYKDLDNYLDSMEKLFTFAIKQNLID 186 Query: 182 NFKTDIYFVSTFEPSTKSVDLLTVETFAG----TVCEYADMPKEWTTTRGLYDPTHVIWT 237 K+ V P + + + + G Y H Sbjct: 187 EKKSKPLAVYHSHPDFSDEEKQRTSICLSIKEPITVDGKSDIGYMSISSGTYAVAHFEIL 246 Query: 238 QA 239 Q+ Sbjct: 247 QS 248 >UniRef50_A6M032 Transcription activator, effector binding n=19 Tax=Bacteria RepID=A6M032_CLOB8 Length = 285 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 82/227 (36%), Gaps = 9/227 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + + + +IE N+ I+I++IA+K+ S Q F +GEYIR+RRL Sbjct: 1 MKWIEGIGEAISYIEENITEEITIKNIAEKTFMSPFYFQKGFAMLCGFTVGEYIRQRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD--YWDLANIFPSF 129 A + T + ++DIAL + S SF++ F + G +P R A + F Sbjct: 61 LAGSDLVSTDEKIIDIALKYGYASPDSFTKAFTRFHGVTPTAVRKDGAMIKSFAPLKIKF 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 L+ + +++ + G S + E + ++ + Sbjct: 121 LLEGGYIMDYKIVEKDSFTVMGVSKVFKYE------NAFAEIPPFWTEHYEAGKGKFVCG 174 Query: 190 VSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIW 236 + E + T+ + T ++ Sbjct: 175 MYGISIDESMGSD-EFEYLIADNYNPSIEIPNGFVTKIIPKHTWAVF 220 >UniRef50_C7IEN8 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IEN8_9CLOT Length = 279 Score = 167 bits (424), Expect = 2e-40, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 83/227 (36%), Gaps = 9/227 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + L +++IE +L I +DIAQ + YS + Q F + + EY+R RRL Sbjct: 1 MDWVRSLNYAIDYIEVHLSENIVCDDIAQSAFYSSFHFQRTFSLLTGMTVSEYVRNRRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD--YWDLANIFPSF 129 AA + ++D+AL +D+ +SF++ F++ G P + + + Sbjct: 61 LAAQELLNYDSKVIDVALKYGYDTPESFAKAFRRFHGVLPSQAKKHGTELKAFNRLTLKI 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 ++ + ++ + + K+ E + + + + Sbjct: 121 VLEGGSVMDYKIEKKDSFRVVTKTRKFTEE----NRIISIPMFWSEYCE--DGLHQKVCG 174 Query: 190 VSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIW 236 + + D E G +Y E T + T ++ Sbjct: 175 MFGICLPGEP-DCKEFEYGIGCEEKYVKQIPEGFITIDIPSYTWAVF 220 >UniRef50_A6EIJ9 Transcriptional regulator, AraC family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIJ9_9SPHI Length = 309 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 91/242 (37%), Gaps = 26/242 (10%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 E K L ++L+++E +LE +S+E IA + YS + +FR+ ++ L YI ++R Sbjct: 7 GEKDHIKRLNKVLQFVEDHLEEELSLEKIAAIACYSPFHFHRIFRSVVNESLNVYIVRKR 66 Query: 70 LCRAAI-LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPS 128 + +AA L+R S+ ++++ F+ SFSR FKK +G SP ++R + + I Sbjct: 67 IEKAASILIRKPGISITELSVMYGFNGNTSFSRAFKKYYGMSPSDFRAQAPGRHSKICIE 126 Query: 129 FLIRQQ---------QKTE-----------CRLINFPETPIFGNSFKYDIEVSNKSPDEE 168 + + + P+ + S D ++ + Sbjct: 127 ERKNGKGKTFFEPYFWDMDNHITWMEARALVEIKTLPQLELAYISHIGDQ---GQAHTFQ 183 Query: 169 VKLRRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTV--CEYADMPKEWTTTR 226 + A ++ + + + + + + + T Sbjct: 184 KLMEWAGQAGLLRTPDFTLLKIYHDSFRITASEQVRMSACIVLKEPVSTDGLVGTMTMPS 243 Query: 227 GL 228 G Sbjct: 244 GK 245 >UniRef50_UPI0001C357C1 AraC family transcription regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C357C1 Length = 307 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 93/232 (40%), Gaps = 14/232 (6%) Query: 8 TENEMIRQKILQQLLEWIECNL-EHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 ++ + + ++++IE +L E + +E IA YSR ++ +F + PL Y+ Sbjct: 16 ANHKRNNIEEIAAVIDYIEEHLMEEKMDLESIASIFHYSRYHLHRMFASVAGFPLHTYLT 75 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANI- 125 +RRL AA L+ T + +L+IAL+ +++Q+SFSR F+K F SP YR + + + Sbjct: 76 RRRLTEAARLLVWTDRPVLEIALASGYETQRSFSRAFQKYFQHSPSRYRKKGDFFPLQLK 135 Query: 126 ---FPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSN----KSPDEEVKLRRHHLAR 178 F +R + + E + G + K R Sbjct: 136 YDVFRREKLRGDRIITVTMREAKELSVVGYCSSTKGGFAGIGRCWRRFHAKKDRISGCTN 195 Query: 179 CMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYAD--MPKEWTTTRGL 228 + Y ++ P + A + EY +++T G Sbjct: 196 KEFLIGINDY---SYYPCKGLDQVFRYIAGAEVMQEYTAPKGMQKFTLPAGR 244 >UniRef50_A9MRK1 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MRK1_SALAR Length = 286 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 66/227 (29%), Positives = 111/227 (48%), Gaps = 5/227 (2%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 +KI+Q + WIE ++E +I+D+ +GYSRR +QL+F+ VP+G Y+R+R++CR Sbjct: 3 YEKKIVQHFVRWIEDHIEEDKTIDDLVNYTGYSRRAVQLMFKKEYGVPVGTYMRQRKMCR 62 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIR 132 AA L+RLT S+++IA +HF Q+F R FK F +P EYR+ WDL+ + P+ I Sbjct: 63 AATLLRLTKLSVIEIAHRVHFSGTQNFGRAFKHAFNMTPTEYRNLPSWDLSLLVPAINID 122 Query: 133 QQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVST 192 + ++ + G+ Y ++ E + R + + +KT+I S Sbjct: 123 NCWNVDSCIVERSGIYVSGDECFYQQKILRTPTLESKRNRLKKIRHYSELYKTNIVIASN 182 Query: 193 FEPSTKSV----DLLTVETFAGTVCE-YADMPKEWTTTRGLYDPTHV 234 F P D++ + +G E + G Y Sbjct: 183 FLPPKNRYSAIRDVIDITMLSGVEVEKNTAKNDTFYVEGGRYIKFVF 229 >UniRef50_A9KR18 Transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=A9KR18_CLOPH Length = 301 Score = 166 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 6/196 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + L++IE NL I +AQK+ S N Q +F VP+ EYIR+RRL Sbjct: 1 MDMLTKMNAALDYIENNLTEDIDFTIVAQKACCSSYNFQRMFSFITDVPIAEYIRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD--YWDLANIFPSF 129 +AAI ++ T ++D+AL +DS SFSR F + G +P E + I Sbjct: 61 QAAIELQNTNAKVIDVALKYGYDSTVSFSRAFSNIHGITPNEAKQSGVELKAYPKISFQI 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 I+ +++ R+ +FG + + R+ H + ++ Sbjct: 121 SIKGEKEMNYRIETKEAFDVFGIETVASLSGEDSFVSPAELWRKSHQNGDYE----RLFN 176 Query: 190 VSTFEPSTKSVDLLTV 205 S P S DL + Sbjct: 177 ASGDLPKFISQDLCKI 192 >UniRef50_B8I0Z7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B8I0Z7_CLOCE Length = 287 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 91/231 (39%), Gaps = 11/231 (4%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + +++IE NL + IS +++A + S Q +F +PL EYIR+RR+ Sbjct: 1 MEWLNQMSRAVDYIENNLTNDISYDEVAGIACCSTYYFQRIFSYIAGIPLSEYIRRRRMT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW--DLANIFPSF 129 +AA ++L+ +++IA+ + + +F+R F + G +P R + I + Sbjct: 61 KAAFELQLSGARVMEIAVKYGYSTAAAFNRAFHSVHGVAPTVARVKGTKLNAYTPISFTI 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNK----SPDEEVKLRRHHLARCMKNFKT 185 I ++ R+ I G + E + L+ ++ ++ Sbjct: 121 NITGGERMRYRIETRDRIRIVGVRVPLEEEPEQNFEIVPAFWDNTLKSSVFSKIIELTNK 180 Query: 186 DIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIW 236 D + + ++ + D+ E+ T VI+ Sbjct: 181 DPHGILGITAYENPKEIYYYIATSTDKPVPEDLV-EYEIP----AATWVIF 226 >UniRef50_B0SDP4 Transcriptional regulator, AraC family n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SDP4_LEPBA Length = 289 Score = 166 bits (420), Expect = 7e-40, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 85/215 (39%), Gaps = 8/215 (3%) Query: 25 IECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTAKSM 84 IE LE I + IA +GYS + F++ + YI++ RL +AA ++++ + Sbjct: 17 IEEQLEKEIGLNQIAFLTGYSDWHFHRFFKSVQKENIKTYIKRLRLEKAAYELKISNFPI 76 Query: 85 LDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKTECRLINF 144 L+I + F S ++F++ FK++ G +P E+R + + ++ S L T+ Sbjct: 77 LEIGMEAGFSSHEAFTKAFKRVIGITPSEFRKKHQIKMKDLSLSQLSLPSGLTKHSFQKK 136 Query: 145 --PETPIFGNSFKYDIEVS---NKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKS 199 I ++ + E ++L+ + F +S +P Sbjct: 137 TISPFSILFIRHLGSYQLLPGPIPNSKEMIQLKTLFSKWDLLEFHHKWIGISQDDPDVTC 196 Query: 200 VDLLTVETFAGTVCEYADMPKEW---TTTRGLYDP 231 D + + ++ P + T G Y Sbjct: 197 KDNIRFDLGFTISEKFPSPPDGFGKQTIPGGNYLQ 231 >UniRef50_B8K3P3 Transcriptional activator n=2 Tax=Vibrio RepID=B8K3P3_VIBPA Length = 306 Score = 165 bits (419), Expect = 9e-40, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 14/215 (6%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 + + + ++L +I +L+ P+S+++IA +S +SR +Q +F+ + + Y+R+ Sbjct: 5 KTKSATFNRISKVLGFIHRHLDTPLSLDEIAAQSCWSRWQLQRVFQAETGLTVANYVRQL 64 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPS 128 +L AA L+ T + ++DIAL+ F+S+ +FSR FK+ F CSPR YR Sbjct: 65 KLSLAAELLLDTDQRVIDIALATGFNSEIAFSRAFKQFFACSPRVYRKAGQRTGLKKPIE 124 Query: 129 FL------IRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKN 182 R+Q E R+ P + G + + + P+ + + L + + Sbjct: 125 ISEVQINGEREQSFVEVRVETKPAFILKGMRGEIT-GLFSLDPNFADVVPK--LWQRLDA 181 Query: 183 FKTDIYFVSTFEPSTKSVDLLTVE-----TFAGTV 212 V + + +AG Sbjct: 182 EANSTSLSFGHCLGVVDVTKVAFDGSNLFYWAGIE 216 >UniRef50_C9NSN9 Transcriptional regulator AraC family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NSN9_9VIBR Length = 284 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 10/229 (4%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + + +E+IE +L IS+ IA S YS + +F+ + EY+RKRRL AA Sbjct: 2 QRFFKSIEYIEQHLYDKISVHQIAAASHYSTYHYSRVFKALVGDTPKEYLRKRRLTMAAK 61 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD------YWDLANIFPSF 129 + +LD+A+ FDSQ++F+R FK LF +P +YR + Y + N Sbjct: 62 RLLTEEVGILDLAMDCQFDSQEAFTRAFKALFNMTPAQYRKMNEPFRLLYKNQINEDDLS 121 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 ++ + E +I P + G + +Y E + + + + Sbjct: 122 FLQNRISMEPEIITQPAIKLVGIANQYTDEDLSLPRLWSG--FAPYRDTIANRVGDEFFG 179 Query: 190 VSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWTQ 238 + +E ++ + T E + E TR + + T+ +T Sbjct: 180 I--YESYEEAEEGTTFVYICSARVENFEQVPEGMITREMPEQTYARFTH 226 >UniRef50_B0N339 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N339_9FIRM Length = 211 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 12/216 (5%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + L++IE +L+ I I D+A ++ S Q FR + EYIR RRL Sbjct: 1 MNWTDGISNALKYIEEHLKEDIKIVDVANEAYVSSFYFQKAFRILCGFSVAEYIRYRRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY--WDLANIFPSF 129 A V T K +++IAL +DS SF++ F + G +P R A + F Sbjct: 61 LAGSEVITTNKKIIEIALEYGYDSPDSFTKAFTRFHGVTPTVARKEQLMIKSFAPLKIQF 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIE-VSNKSPDEEVKLRRHHLARCMKNFKTDIY 188 ++ + ++I + G + ++D + N+ P M++ + Sbjct: 121 TLKGGSTMDYKIIEKEAFTVLGKARRFDFDCAFNEIP--------KFWGEHMQSADKKVC 172 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTT 224 V + + A +++P + Sbjct: 173 GVYGVCIEDEKDEGFKY-LIADEYVLDSEIPDGYEV 207 >UniRef50_P96662 Uncharacterized HTH-type transcriptional regulator ydeE n=105 Tax=Firmicutes RepID=YDEE_BACSU Length = 290 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 89/234 (38%), Gaps = 10/234 (4%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M K + + L++IE NL + I ++ A+ + S + + +F + L EYIR+RRL Sbjct: 1 MDLLKSMNRALKYIEENLTNDIDFQEAAKLAFCSEYHFKRMFSFLAGISLSEYIRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY--WDLANIFPSF 129 AA ++ + ++DIA+ ++S SF+R F+ L G +P + R + + Sbjct: 61 LAAFELKDSNVKVIDIAIKYGYNSPDSFARAFQNLHGINPSKARFNGHSLKAYPRMTFQL 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKL------RRHHLARCMKNF 183 I+ + R+ I G + I +P+ + L Sbjct: 121 TIKGGNEMNYRIEEKEAFRIVGIKKRVPIIFKGINPEIASMWESLDEKAINKLKELSNVA 180 Query: 184 KTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYA--DMPKEWTTTRGLYDPTHVI 235 + + ST ++ + ++ + G D + I Sbjct: 181 PSGLISASTNFSEGRTEENGELDHYIGAATTKRCPDNFSRLEVPASTWAVFESI 234 >UniRef50_C5RP62 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RP62_CLOCL Length = 292 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 2/149 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M +Q + ++E N+ I+ + IAQ + S + Q +F +GEYIR RRL Sbjct: 1 MDWINSMQNAINYMEDNILEEINYDKIAQCAYSSTYHFQRMFSMLTGFTVGEYIRNRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR--DYWDLANIFPSF 129 AA + + + + DIA+ + + ++F++ F++ G +P R ++ Sbjct: 61 LAAQELSFSKERITDIAIKYGYGTSEAFTKAFQRFHGITPTAARESGVKLKSFNSLSIQV 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDI 158 ++ ++ ++I IFG FK +I Sbjct: 121 TLKGDKEMNYKIIEKEPFKIFGKDFKTNI 149 >UniRef50_B2SZ92 Transcriptional regulator, AraC family n=12 Tax=Proteobacteria RepID=B2SZ92_BURPP Length = 314 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 75/199 (37%), Gaps = 6/199 (3%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 + N + L ++L+ I +L+ P+ I+ +A+ + S + +++ + +R Sbjct: 29 ESGNRARYETRLGRVLDHIYDHLDEPLDIDRLAEIACLSPYHWHRIYQAMYGETVATTVR 88 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIF 126 + RL RAA + + +++IA + S QSFSR F+ +FG P +YR + Sbjct: 89 RLRLHRAAGYLANGSMPIVEIAERSGYSSLQSFSRTFRAVFGVPPAQYRKQGTHS--RFR 146 Query: 127 PSFLIRQQQKT-ECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKT 185 P+ Q E + + + + L + + Sbjct: 147 PALSGDDQMTMREVVIRHVEPIEVLSVDHVGPY---MQIGKAFDALFGWLAKHNLLAGQM 203 Query: 186 DIYFVSTFEPSTKSVDLLT 204 + V +P + L Sbjct: 204 RMVGVYYDDPGVVAESELR 222 >UniRef50_C0CY04 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0CY04_9CLOT Length = 295 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 15/235 (6%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 L++ +E+IE +L+ I + D++++ GYS ++ LF + P+G YI +RRL RA Sbjct: 10 HLTPLERAIEYIETHLDENIDLGDVSREMGYSYYHMTRLFSAVLGEPVGRYISRRRLYRA 69 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQ 133 A + + + ++DIAL F S ++FSR FK LF +P YR +A L Sbjct: 70 AQQLVHSDRRIIDIALESGFQSPEAFSRAFKALFKTTPAGYRKAGLDLVATAKRQLLPGD 129 Query: 134 QQKTECRLINFP-------ETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTD 186 + + P E I G I + + LR H + Sbjct: 130 VPHIAAGISHSPEILQMTEEIKIAGLRDITSISQNRIPQLWDQFLRFHGDLYELTETAYS 189 Query: 187 IYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEW---TTTRGLYDPTHVIWTQ 238 + + D+ V +++++P+ T G Y ++T Sbjct: 190 -ICETRQTAYAEDGDVTFSVMVGSPVPDFSNLPETLAQTTLRPGKYA----VFTH 239 >UniRef50_Q24TQ4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=Q24TQ4_DESHY Length = 305 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 2/180 (1%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 +M +Q+ L++ E +L I E +A+++ S + Q +F LG+YIR RRL Sbjct: 14 KMDWITGIQRSLDYTEAHLTEKIDYEMVAKQAYSSAFHFQRVFSILCGFSLGDYIRMRRL 73 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD-YWDLANIFPSF 129 RAA + T + ++ IAL +D+ +SFSR F + G +P E R + Sbjct: 74 ARAAEDLLCTDEKIIHIALKYGYDTPESFSRAFLRFHGITPTEARRGGTVKSFFRLSVKL 133 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 ++ + R+ I + + + S EE+ + + Y Sbjct: 134 ILSGGSTMDYRIEKKDAFKIICKKKQVN-KPQGDSATEEISAFWNQCTKDGTMEDICKYG 192 >UniRef50_C5RJ15 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJ15_CLOCL Length = 290 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 6/179 (3%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 E M+ + + +IE NL+ I + ++A+++ S + +F +PL EYIR+R Sbjct: 4 EGVMVWLDRMNSAINYIEENLDGEIEMGEVARRACCSEYHFTRMFSFITDIPLNEYIRRR 63 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD--YWDLANIF 126 +L A ++ + ++D+A +DS SF+R F+ + G +P E R A I Sbjct: 64 KLTLAGFELKNSDIKIIDLANKYGYDSPNSFTRAFQGMHGVTPSEARILGVEIKSYAPIS 123 Query: 127 PSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKT 185 I R++ +FG S E S E + + +K Sbjct: 124 FLITINGGIGMNYRIVEEDALTLFGISLTTRREES----FETIPDFWNKCEEERITYKI 178 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 163 bits (413), Expect = 4e-39, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 55/101 (54%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 L + ++I+ + P+++E++A+++G S LF+ + +Y+ R+ RA Sbjct: 409 KLGKAKDYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGITFIDYVTNVRIERAKEA 468 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + T +S+ +I S+ ++ FSR FKK G SP EYR + Sbjct: 469 LAETDQSLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKK 509 >UniRef50_C3BTE5 Transcriptional regulator, AraC n=1 Tax=Bacillus pseudomycoides DSM 12442 RepID=C3BTE5_9BACI Length = 303 Score = 163 bits (413), Expect = 4e-39, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 93/209 (44%), Gaps = 5/209 (2%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 ++ +I+ +L +I+ NL + ++ +A+K+G S + +F+N + L +Y+ Sbjct: 12 MSNRSNRNLEIVIPILVYIQANLHEDLDLKVVAKKAGLSPFHFHRMFKNVVGETLKQYVL 71 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANI- 125 + +L +AA ++ + +L I+ L F + +SF+R FK+ F +P++YR + ++ Sbjct: 72 RIKLEKAAFALKYWDEKILSISNELGFKNPESFTRAFKREFQYTPKDYRQQFRKGELSLE 131 Query: 126 -FPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFK 184 SFL + E + +F + + D + + A+ K ++ Sbjct: 132 ERHSFLNQMTNVFEISPVTLKHVSPIDVAFIRNTGLYEDV-DTRLFHKLIQWAKDKKIYR 190 Query: 185 TDIY--FVSTFEPSTKSVDLLTVETFAGT 211 D + V P+ +LL + Sbjct: 191 NDCFLLGVGHDAPTITPKELLRFDCCIEV 219 >UniRef50_D1ARB2 Transcriptional regulator, AraC family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ARB2_SEBTE Length = 285 Score = 162 bits (411), Expect = 7e-39, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 88/219 (40%), Gaps = 5/219 (2%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M L LE+IE NLE+ + I+ IAQ S N+Q +F V LGEYIR RRL Sbjct: 1 MNWISALNNALEYIENNLENDVKIKKIAQICLCSEYNVQRVFSIISGVTLGEYIRNRRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPRE--YRHRDYWDLANIFPSF 129 +AA+ +R T ++DIA +++S +FS+ FK G SP++ R + + S Sbjct: 61 KAAVDIRETNMRIIDIAFKYNYESADAFSKAFKNFHGISPKDGRVRSNELKTYPKLHFSM 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKY---DIEVSNKSPDEEVKLRRHHLARCMKNFKTD 186 +I+ ++ + R+ + + G Y + + N + Sbjct: 121 IIKGGKEMKNRIAEKGKLRVIGMKRTYKNVEEGMENIPKFWIEFNASKECTEMCSKMDGE 180 Query: 187 IYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTT 225 + ++ + E +E+ Sbjct: 181 LKGFLGLCIPHETGAGYDYMICINSSAEAGGELEEYEIP 219 >UniRef50_C6CRD1 Transcriptional regulator, AraC family n=2 Tax=Firmicutes RepID=C6CRD1_PAESJ Length = 303 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 2/172 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + +E+IE NLEH I E IA+ + S Q +F + +PL EYIR+RRL Sbjct: 1 MDWLQRMNLAVEYIEDNLEHDIDYEQIARIALCSVYQFQRMFSFVLEIPLSEYIRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR--HRDYWDLANIFPSF 129 AA ++ + DIAL +++ +SFSR F+ L G +P R + Sbjct: 61 LAAFDLQDRKNKVTDIALKYGYETPESFSRAFQNLHGLTPTAARLAGSPLKAYPRLSFQI 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMK 181 +++ + R++ +FG Y ++ + ++++ + Sbjct: 121 ILKGVAEMNYRIVEREAFQVFGLEDIYGMDNIANQDGITIPEIWQNISKNGE 172 >UniRef50_C6PTW1 Transcriptional regulator, AraC family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PTW1_9CLOT Length = 286 Score = 161 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 85/231 (36%), Gaps = 9/231 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + +E++E N+ + I IE++A+ + S + Q ++ + +GEYIR+RRL Sbjct: 1 MDWLNAMNKAVEYVEANITNKIDIEEVAKIALSSTFHFQRMYHMITGITVGEYIRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR--DYWDLANIFPSF 129 A + + + +++I+ +++ ++F++ F+K++G SP R + + Sbjct: 61 LAVQDII-SGEKIINISHKYGYETPEAFTKAFRKMYGVSPTAARESGVNLKAYPKLSFHL 119 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLR--RHHLARCMKNFKTDI 187 I+ + R+ + + G K + R + + K Sbjct: 120 SIKGDKDMNYRIFDKESFMVVGKQAKISMIDEQNFSQVPKFWRGCMKEGSYQWMSSKAGK 179 Query: 188 YFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWT---TTRGLYDPTHVI 235 + + +PK + + + Sbjct: 180 LGILGISKDFDKYKD-EFNYMMAIEKIQSTIPKGYVSANIPAATWAAFEAV 229 >UniRef50_C5EQJ6 AraC-family transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQJ6_9FIRM Length = 289 Score = 161 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 96/230 (41%), Gaps = 10/230 (4%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 +I+Q+++++I+ +LE + E I++++GYSR ++ +F + + L YI++RRL A Sbjct: 4 NIQIIQEVVDYIDSHLEDRLDAESISRQAGYSRYHLSRMFTSITGLSLHTYIQRRRLTEA 63 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFP----SF 129 A + T + ++DIALS + SQQ+F+ F+ LF +PR +R + + + + Sbjct: 64 ARQLVFTDRPVMDIALSAGYGSQQAFTVGFRALFRTTPRAFRKKGDFHPLQLKFTADGTD 123 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 +R + + R + + G + H K+ + Sbjct: 124 ALRGDRIMDIRTMESGPIYLAGYKKNTRLGFFVIGQCWRRLHAAKHTIPNRKDPDF-LVG 182 Query: 190 VSTFEPSTKSVDLL-TVETFAGTVCEY-ADMPKEW---TTTRGLYDPTHV 234 ++ + D + +A + +P G Y Sbjct: 183 LNDYTKWDADADRQPAFDYYAASEQTQPGRLPPGMEAKELPAGKYVIFRF 232 >UniRef50_A6D8X3 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D8X3_9VIBR Length = 295 Score = 161 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 101/238 (42%), Gaps = 10/238 (4%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 +++ + I +++++++I NL+ P+++ ++A S +SR +Q +F+ + L +Y+R Sbjct: 2 VSKRKPIHLNRVEKIVDYIHQNLDKPLTVTELADISCWSRWQLQRVFQEQTNHNLAQYVR 61 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR----HRDYWDL 122 +++L RAA + + + + DIAL F+S+ SFSR FK+LF SPR+YR Sbjct: 62 EQKLSRAAEQLLKSDQKVTDIALDFGFNSEVSFSRAFKQLFAISPRQYRLVGKLNGIRLP 121 Query: 123 ANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKN 182 + P + Q R+ + PET +G D + + L + Sbjct: 122 LVMSPELPLAQAATQVVRIESKPETQFWGVYGPIDSIYAANPQFSQQVLDIWGTFTQIAL 181 Query: 183 FKTDIYFVSTFEPSTK-----SVDLLTVETFAGTVCEYADMPKEWTTTRGLYDP-THV 234 + + + L+ + T +Y THV Sbjct: 182 QHSIAPNHFYYGIVDTVRVLPNSQLVYWAASDNPAFSQISQLEHVTIPAQMYAVITHV 239 >UniRef50_A6VR73 Helix-turn-helix-domain containing protein AraC type n=2 Tax=Marinomonas RepID=A6VR73_MARMS Length = 306 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 23/229 (10%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 R ++++L++I NL+ I + +A+KS +SR Q +F + + +YIR+ RL Sbjct: 4 QDRLTRIEKVLDYIHENLDESIHVSSLAEKSCWSRWQFQRVFGQATGLSVAQYIRELRLS 63 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW-----DLANIF 126 +AA L+ + +DIA+ FDS+ SFSR FK++F C+PR+YR R L Sbjct: 64 KAAELLLSSKNRHVDIAIQCGFDSEISFSRAFKQMFNCTPRDYRQRGKRYGLRTPLQYRC 123 Query: 127 PSFLIRQQQK--TECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFK 184 P+ + K T+ R+ + I G + + + SP+ ++ ++ + K Sbjct: 124 PNKAQTETPKTFTQIRIESRDGFHIQG-RSAWIRGLFSASPNFSERVP-QLWSQVISEVK 181 Query: 185 TDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTH 233 T + P ++A P + G +P + Sbjct: 182 TVTKG---YRP-----------IGIIDTQDHAQHPDQMLYWAGYLEPIN 216 >UniRef50_B0SZN8 Transcriptional regulator, AraC family n=11 Tax=Proteobacteria RepID=B0SZN8_CAUSK Length = 296 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 92/244 (37%), Gaps = 17/244 (6%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 + +T +Q++L+ I+ +L+ + +E ++ + +S+ + F+ V L Y Sbjct: 2 RTMTAALDQYHARMQRVLDHIDRHLDGDLDLEAMSSVAAFSKFHFHRQFKATFGVSLHRY 61 Query: 65 IRKRRLCRAAILVRLTA-KSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLA 123 ++ RL RA+ + +S+ DIAL +++ +F+R F++ F SP +R W+ Sbjct: 62 VQLARLRRASKRLADGQGQSVTDIALDAGYETPDAFARAFRQRFAQSPSRFRKSPDWEPW 121 Query: 124 -NIFPSFLIRQQQKTECRLI-------NFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHH 175 F + + + T + + D E + + + R+ Sbjct: 122 LAAFGPLNAARSKIMQTTFTPDQVALREVAPTRVAIFEHRGDPETLDATIQRFIAWRK-- 179 Query: 176 LARCMKNFKTDIYFVSTF-----EPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYD 230 A + + + +P+ S+DL + ++ K G Sbjct: 180 -AAGLSPRTNPTFNIWHSERRPPDPADYSMDLCVGVGADQPIDSSSETVKAGEIPGGRCA 238 Query: 231 PTHV 234 V Sbjct: 239 VLRV 242 >UniRef50_A4BA46 Transcriptional regulator, AraC family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BA46_9GAMM Length = 293 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 12/229 (5%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 R L QLL++I ++ P+S++ +A +S +SR +Q +F + + +Y+R+ +L A Sbjct: 6 RFNRLDQLLDYIHRHIHEPMSLDTLAAQSAWSRWQLQRVFVAYTGYTVAQYVRELKLSLA 65 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANI------FP 127 A + + +LDIALS F S+ +FSR FK+ F SP +YR R Sbjct: 66 ADCLLENSDRVLDIALSFGFGSEVAFSRAFKQFFKVSPHQYRKRGLRSGIRTPLQRADVS 125 Query: 128 SFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEV--KLRRHHLARCMKNFKT 185 + RL + P G + + +S + E+ +H + T Sbjct: 126 RLNLPANTLYHVRLEHKPAFDFCGLPTRINGLLSGQPNFEDRIPAAWQHFQQLTHRRLPT 185 Query: 186 DIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMP---KEWTTTRGLYDP 231 D + + ++ L + + G P ++ + Y Sbjct: 186 DRPRIGLIDTFSQPT-LGQLVYWTGIEQSKPSAPVFLEKLSLPTSDYAV 233 >UniRef50_A8GJ26 Transcriptional regulator, AraC family n=2 Tax=Serratia RepID=A8GJ26_SERP5 Length = 288 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 68/248 (27%), Positives = 116/248 (46%), Gaps = 26/248 (10%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 ++ +++LL WIE NL +P+S++ ++ KSGYS+ +Q +F+ + L YIR RRL A Sbjct: 4 QENHIRELLVWIEDNLTNPLSLDIVSAKSGYSKWYLQRMFKTQTGLSLASYIRARRLYLA 63 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQ 133 A +R T K++LDI++ FD+QQ+FSR FKK F SP YRH D +++ S Sbjct: 64 AFALRFTQKTILDISIEYQFDNQQTFSRCFKKHFAESPSVYRHARKQDFSHLVRSLSANH 123 Query: 134 QQKTECR--LINFPETPIFGNSFKYDIEVSNKSPDE---EVKLRRHHLARCMKNFKTDIY 188 + + + I G S+ Y +++++ K+R + + Y Sbjct: 124 PGDIQVDRIKVAKGQYAIKGKSYAYHLDIADLDKSHLHIRSKIREQFYQS-VASRPALTY 182 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVCE---------------YADMPKEWTT--TRGLYDP 231 ++ F P + + VE G + + D + + L+D Sbjct: 183 ALTQFIPD---GEQVRVEYALGVAEDCPTSDVAGLEPWPEIHGDYCRFCYSGKPVALHDH 239 Query: 232 THVIWTQA 239 I+TQA Sbjct: 240 VVQIYTQA 247 >UniRef50_A1ZL96 Transcriptional regulator, AraC-type n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZL96_9SPHI Length = 290 Score = 159 bits (403), Expect = 7e-38, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 90/223 (40%), Gaps = 4/223 (1%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 Q +Q++LE+I +L P+ + +A+ +S + + R +++ PLG YI++ R+ Sbjct: 8 HNDYQTRIQKVLEYIRQHLSEPLDVARLAEIGNFSVFHFHRIIRAYLNEPLGAYIKRVRM 67 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR-HRDYWDLANIFPSF 129 AA L+ + + D++ + ++ SFS F+K FG SP+ +R + + + Sbjct: 68 ETAAQLLTYSHTPIHDLSYQMGYELPSSFSHAFRKYFGKSPQAFREQQQQFIKNQPQTTN 127 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 ++I+ P + E ++ KL + A+ + +++ Sbjct: 128 TTLPGFVLTPKIIDLPAQQLLSTRILGKYE-TSVIQKAWQKLMTYVFAQQLFYPTMEMFG 186 Query: 190 VSTFEPSTKSVDLLTVETFAGTVCEYADMPKEW--TTTRGLYD 230 +S P L E A + T G Y Sbjct: 187 ISHDHPEIAGDILYQYEACVTLAKPVASEGEFVVKTLPAGKYA 229 >UniRef50_A6LX85 Transcription activator, effector binding n=2 Tax=Bacteria RepID=A6LX85_CLOB8 Length = 297 Score = 159 bits (403), Expect = 7e-38, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 86/221 (38%), Gaps = 15/221 (6%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M K LQ ++++E +L I+ E++A++ S N +F + EYIR R+L Sbjct: 1 MSFGKSLQSAIDYMESHLLEKINYENVAKEVHMSCYNFHRIFSLMAGITANEYIRNRKLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW--DLANIFPSF 129 A ++LT ++D+A +++ +SF++ F + G SP+ + + + Sbjct: 61 LAGQELQLTDSKIIDVAFKYGYETPESFAKAFSRFHGVSPKLAKRKGTQLCLFNPLAIKI 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCM--------- 180 ++ R+ + + E+ N++ + ++ + Sbjct: 121 ILEGGNTMNYRIEETGKQRFIAKVRAFSNEIMNEAGNHDIPDFWGECHKEHLVEEIRNMR 180 Query: 181 KNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKE 221 + K D+Y + S + T + G + + Sbjct: 181 PDGKKDLYGLC----SPTKKNETTFDYGIGVLIDEDTHIDN 217 >UniRef50_B8CLS6 Transcriptional regulator, AraC family n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CLS6_SHEPW Length = 303 Score = 159 bits (402), Expect = 7e-38, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 24/239 (10%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 ++++L +I +L+ P+S+EDIA+ S SR +Q +F+ + + +Y+R+ +L AA Sbjct: 8 SRIERVLNFIHTHLDQPLSLEDIAEHSQCSRWQLQRIFQQQTGLNVAQYVRELKLSIAAD 67 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR----DYWDLANIFPSFLI 131 V MLDIA L F+S+ SFSR FK+LFG SPREY+ R + I P F Sbjct: 68 KVLSGQSRMLDIAYELGFNSEVSFSRSFKQLFGVSPREYQRRGIRVGLRNPIAIRPEFTA 127 Query: 132 RQQQKT---ECRLINFPETPIFGNSFKYDIEVSNKSPDEEV----KLRRHHLARCMKNFK 184 ++ T + + + ++G S +S+ + LR + + Sbjct: 128 NKKIDTTFLQTHIEHRQAFTVYGLSSPIKGVLSDAPDFSSIVPDTWLRLFDIIDGVLPLA 187 Query: 185 TDIYFVSTFEPSTKSVDLLTVETFAGTVCE-----------YADMPKEWTTTRGLYDPT 232 ++ V + + + ++ +AG + + T Y Sbjct: 188 GNMLGV--VDTLSLKTEQQSIRYWAGLELDAEQRQSLQTLLTEEKLCSLTIPSQEYAVV 244 >UniRef50_C3RPB0 AraC-family transcriptional regulator n=3 Tax=Bacteria RepID=C3RPB0_9MOLU Length = 286 Score = 159 bits (402), Expect = 8e-38, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 89/230 (38%), Gaps = 15/230 (6%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +Q L++IE N + I I+ +A + S+ Q LF + +Y++ RRL Sbjct: 1 MYAWQEIQVTLDYIEENYDKEIDIDKLAAIAHLSKYYYQRLFFRLTKKTVNDYVKLRRLE 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 +AA ++ T K +LDIA++ F +F+R FK+++ +P +YR++ I P + Sbjct: 61 KAANQLKNTEKRILDIAIACGFSGHSAFTRAFKEVYKITPDDYRNQKIHLDHFIKPDLQL 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVS 191 + + G + + + K + + + +I + Sbjct: 121 NY-----VVIDTGVPLIVEGMVLEINEKQVCNDRIFYGKSKMAKVDELGEPKINNIVSLY 175 Query: 192 T---------FEPSTKSVDLLTVETFAGTVCEYADM-PKEWTTTRGLYDP 231 + T S D F G + + ++ G Y Sbjct: 176 QELDVQDAVVVDILTLSDDPALFNYFVGIEIDRPSIDCEQRIIPSGKYVV 225 >UniRef50_UPI0001BC4194 AraC family transcription regulator n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4194 Length = 277 Score = 159 bits (402), Expect = 9e-38, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 91/226 (40%), Gaps = 7/226 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + L + +E+IE NLE+ I ++ + S + Q +F V LGEYIR+R++ Sbjct: 1 MEWIERLNEAVEYIEMNLENKIDYTKASKIACCSVYHFQRMFSYIAGVTLGEYIRRRKMT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD--YWDLANIFPSF 129 +AA ++ + +L+++ +DS SFSR F+ + SP R+++ + S Sbjct: 61 KAAFELQRSDIKILELSAKYGYDSPTSFSRAFQSIHKISPSIARNKNITLKTYPKLTFSL 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSN---KSPDEEVKLRRHHLARCMKNFKTD 186 ++ +++ E + I G K ++++ + PD + ++ + + Sbjct: 121 SVKGEEELEYYITEKDSLDILGIGKKIELDMEKNFFEIPDFWNENIKNKNIEKLLKYNAK 180 Query: 187 IYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPT 232 + + F E + G + Sbjct: 181 DKNILGVSLYNNKEVWYYIAVFNDREGEDG--MERHKIPGGTWAVF 224 >UniRef50_A4SKL5 Transcriptional regulator, AraC family n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SKL5_AERS4 Length = 302 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 76/246 (30%), Gaps = 20/246 (8%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 E+ + +K + + +++I +L+ S++++A + S + +F+ + + + R+ Sbjct: 4 KESSLDYRKPVFKAMDYISQHLDDNPSLDEVATAAAISTFHFHRIFKTMVGETIAGFTRR 63 Query: 68 RRLCRAA-ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLAN-- 124 R+ RAA L+ + +AL+ F S Q+F++ F+ F SP EYR + + + Sbjct: 64 LRMERAARRLLAAPQSDITTLALAAGFSSSQNFAKAFRLHFAMSPSEYRQQQGGNWKSKI 123 Query: 125 -------------IFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKL 171 + Q + P + L Sbjct: 124 GNDPLPFETYDGLVMHPVTEHQGLLQGASVKQMPARRVAYMRRMGPYGKETCEQAHRDLL 183 Query: 172 RRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFA--GTVCEYADMPKEWTTTRGLY 229 M + P + G T G Y Sbjct: 184 ALFASDEAM--TPAGTLSLYWDIPDITDETRCRTDICIELGPEIHAGRQLTTQTIAAGPY 241 Query: 230 DPTHVI 235 I Sbjct: 242 AVCQFI 247 >UniRef50_UPI00019685E3 hypothetical protein BACCELL_00469 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI00019685E3 Length = 329 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 90/224 (40%), Gaps = 9/224 (4%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 K + Q++++I+ NL+ I + +A + S + +F++ M+ +GEY+++ RL RA Sbjct: 50 YLKPVNQVVDYIQSNLQEKIELTTLANLANISHFHFHRIFKSVMNENVGEYVQRVRLERA 109 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQ 133 A ++ T ++ +IA + + +Q + S+ FKK F SP YR + Sbjct: 110 AFKLQTTNLNLTEIAEQVGYQTQFALSKAFKKYFNISPSTYRSMPTDLTIPVRREECGIS 169 Query: 134 QQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTF 193 + + R+I + + + +L ++ + + +T+ + S Sbjct: 170 DIRQDIRVIE--PVEVVYIQVANPYKYIDAFTKAWDRLLKYVRKGGIPDGETEYFTFSRD 227 Query: 194 EPS-TKSVDLLTVETFAGTVCEYADMPKEW----TTTRGLYDPT 232 P+ S + + F P T G Y Sbjct: 228 VPTIITSPEQQRI--FVCVNNSDHLEPSGIIGVQTIEGGEYAVF 269 >UniRef50_C3RHZ9 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RHZ9_9MOLU Length = 280 Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 6/186 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + L +E+IE +L I E +A+ +G + Q F ++ L EYIRKRR+ Sbjct: 1 MEWIERLNTTIEYIENHLTEKIDYEQLAKIAGCPSYHFQKTFLYMTNISLSEYIRKRRIS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD--YWDLANIFPSF 129 AA+ ++ ++DIAL ++S +F+R F+ + G +P R ++ + +F Sbjct: 61 LAAVDLQTGEDKIIDIALKYGYESPTAFNRAFQAVHGIAPSLVRKKNVQIKSFPALKFTF 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 I+ + R+ I G S E+ V++ + +Y Sbjct: 121 SIQGLDELSFRIEKKDSFKILGISSLLSKELLEN----FVQIPKQWDKALNDGTLNQLYR 176 Query: 190 VSTFEP 195 ++ P Sbjct: 177 LNNQTP 182 >UniRef50_B6ICR2 Putative transcription regulator n=1 Tax=Escherichia coli SE11 RepID=B6ICR2_ECOSE Length = 276 Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats. Identities = 77/226 (34%), Positives = 126/226 (55%), Gaps = 11/226 (4%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 + I + I+Q ++ WIE N+E I IED+A +GY RRN+QL+F+ ++H+ LGEYIR Sbjct: 1 MHNRHTIDRLIVQHIILWIEDNIESTIKIEDVATITGYCRRNVQLIFKRYVHISLGEYIR 60 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIF 126 +R++ RAA L++ + +++DI++ LHFDSQQSF+REFKK+ G P++YR+R+YW+L + Sbjct: 61 RRKIARAAALLKTSTLNLIDISIRLHFDSQQSFTREFKKILGVPPQKYRNRNYWNLPYLC 120 Query: 127 PSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTD 186 P ++ + I+F + D+ N S R+ + + +K D Sbjct: 121 PPYIWG-------KAISFTFLELSEMVLTTDVIPGNYSCFS----RKETIMSYIDKYKAD 169 Query: 187 IYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPT 232 +Y +S + K DL + + T K+ T GLY Sbjct: 170 VYCISGYGLQQKIGDLDYRDNYIATTKNDKAHCKKLTIPSGLYAKF 215 >UniRef50_Q1GMI1 Transcriptional regulator, AraC family n=6 Tax=Rhodobacteraceae RepID=Q1GMI1_SILST Length = 277 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 85/229 (37%), Gaps = 20/229 (8%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 + + ++L +I N +S++ +A + SR + +FR G+ +R+ RL RA Sbjct: 5 YEDRILRVLRYIHDNPAGDLSLDRLADVAAMSRFHWHRVFRALTGETCGQSVRRIRLHRA 64 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQ 133 A+ + + S+ +IA ++ + S+ SFSR F +G +P +R + P +R Sbjct: 65 AVALAHSDASIEEIAATVGYPSRHSFSRAFTAAYGDAPGAFRAKGLH-----LPPLALRD 119 Query: 134 QQKT---ECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLR--RHHLARCMKNFKTDIY 188 ++ L + P + + ++ + L R+ + + Sbjct: 120 PKELSMHNVTLRDEPARHLVTVPHRGPYAEIGRAFEHFSALANSRNLWPQLGP-----VL 174 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWT---TTRGLYDPTHV 234 V P D L ++AG P+ G Sbjct: 175 GVYLDAPGEMPEDQLR--SYAGAEYRGDGTPEGLEPFALPGGKAAVLTF 221 >UniRef50_A8MJ72 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJ72_ALKOO Length = 302 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 50/234 (21%), Positives = 96/234 (41%), Gaps = 10/234 (4%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M ++Q L++I+ ++ I++E++A+ +G+S + +F +F+ +P+ EYI +R+L Sbjct: 1 MHYLNLIQNTLDYIDFHILEKITVEELAKIAGFSTYHFYKVFNSFVGMPVMEYITRRKLQ 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR----DYWDLANIFP 127 A + K +LDIAL+ F++ F++ FKK FG P YR + Sbjct: 61 YALYDLSNG-KKVLDIALTYGFETHAGFTKAFKKSFGYPPSFYRIHAPIGPLKKVDLKKL 119 Query: 128 SFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARC-MKNFKTD 186 E ++I I G FK + + S D + ++ K ++T Sbjct: 120 KENKTGGIIMEPKIIQRDSFKIVGYEFKTTLRNNAHSRDIPAFWDQCNIEGKEAKLYETQ 179 Query: 187 I---YFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWT 237 + +T + G D T + T+ ++T Sbjct: 180 FPPRHGEYGICVNTNM-ETDEFSYILGVEVLSFDHAMIDMYTLDVPAATYAVFT 232 >UniRef50_A4B9Y7 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4B9Y7_9GAMM Length = 297 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 49/231 (21%), Positives = 85/231 (36%), Gaps = 10/231 (4%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + +Q L++ IE NL +++ +A S + Q F++ + LG YIR RRL RAA Sbjct: 6 QHIQTLVDRIEANLADDVNVLGLADAFHMSPWHFQRTFKSLIGDTLGGYIRGRRLTRAAQ 65 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQ 135 L+ + +S++DIA+S+ F+S ++FSR FK F +P+ +R P + Q Sbjct: 66 LLLESRRSVIDIAVSVGFNSHEAFSRSFKAYFNVTPKAFRAERPAITLREKPLLTLELFQ 125 Query: 136 KT------ECRLINFPETPIFGNSFKYD---IEVSNKSPDEEVKLR-RHHLARCMKNFKT 185 + PE + G + + + + Sbjct: 126 HLADGMDQNPVITERPEQHLIGQQIAIPSPFVSDVDYCDLLFTPWTDLLSVEAALPGRVP 185 Query: 186 DIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIW 236 YF PS + V + P E ++ Sbjct: 186 GEYFGLMVSPSGTFTEDSLFYLAGAGVQQPIADPGEGMVALSFPAQQVAMF 236 >UniRef50_C7IHL6 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHL6_9CLOT Length = 290 Score = 156 bits (396), Expect = 4e-37, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 2/165 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + + ++E NL I +++A+K+ S + Q +F VPL EYIR+RRL Sbjct: 1 MNWLDKMNEAICYVEDNLAGEIDFDEVARKACCSTYHFQRMFSFITEVPLSEYIRRRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR--DYWDLANIFPSF 129 AA ++ ++ ++++A ++S +F+R F+ L G +P R I Sbjct: 61 LAAFELQNSSVKVIELAFKYGYESPDAFTRAFQNLHGVTPTSARDMGVQLKAYPRISFHI 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRH 174 I+ + R+ +FG + Sbjct: 121 SIKGDVEMNYRIEEKESFSVFGIDTILSKVDGECYKRIPEFWLKS 165 >UniRef50_B7JL95 Transcriptional regulator, AraC family n=54 Tax=Bacillus cereus group RepID=B7JL95_BACC0 Length = 299 Score = 156 bits (394), Expect = 7e-37, Method: Composition-based stats. Identities = 33/106 (31%), Positives = 67/106 (63%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 ++++++ +E+IE +L ++ E +A S S + +F+ ++ + + +YIRKRRL Sbjct: 2 HEEYKEMIKKAIEYIENHLHEELTTERVASHSAVSMYHFHRIFQRYIGMSVTDYIRKRRL 61 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 AA ++ T ++++DIA+ F SQ++F+R FK++F P++YR Sbjct: 62 THAAQVLVSTERAVIDIAMQYGFSSQEAFTRAFKRMFQLPPKKYRK 107 >UniRef50_B0C3V1 Transcriptional Regulator, AraC family n=5 Tax=Cyanobacteria RepID=B0C3V1_ACAM1 Length = 283 Score = 156 bits (394), Expect = 7e-37, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 58/100 (58%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + LQQ+L++I+ +L+ I + D+AQ S + LF+ +Y+ ++R+ A Sbjct: 182 RQLQQVLDYIDAHLDCEIKLADLAQILDMSPFHFSRLFKLSTGKSPHQYLIQQRIEHAKQ 241 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L++ T + ++DIA F+S S++F+++ G +P+ YR Sbjct: 242 LLKQTDRRIIDIAYECGFNSHSHLSKQFRQMMGVTPKVYR 281 >UniRef50_UPI0001C368D7 AraC-family transcriptional regulator n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368D7 Length = 320 Score = 156 bits (394), Expect = 7e-37, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 74/189 (39%), Gaps = 2/189 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + +L+++E +L ++ E +AQ +G S Q LF+ P+ EY++ RRL Sbjct: 1 MHAWEAIDGVLDFMEEHLREEMNTEALAQSAGLSPFYFQRLFKRLTGRPVLEYVKMRRLA 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 AA + K +LDIA+ F S SF+R FK+ +G SP +YR + N + Sbjct: 61 LAASALEDREKRILDIAVDYGFSSHASFTRAFKEAYGISPEKYRK--DRPMLNTCEKPEL 118 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVS 191 + + I + + E + ++ D+ Sbjct: 119 SMRYHLVDEGVPLIAGDIVLEIRRMRLTEPEWYLGLETAVEIKKQVPAGESTGIDVPGQL 178 Query: 192 TFEPSTKSV 200 K Sbjct: 179 WKAFHEKKP 187 >UniRef50_B5WD53 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=B5WD53_9BURK Length = 416 Score = 156 bits (394), Expect = 8e-37, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 71/225 (31%), Gaps = 13/225 (5%) Query: 21 LLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLT 80 +L+ I +L+ P+ I +A+ + S + +++ + +R+ RL RAA + + Sbjct: 1 MLDHIYDHLDEPLDIGRLAEIACLSPYHWHRIYQAMYGETVATTVRRLRLHRAAGFLANS 60 Query: 81 AKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKTECR 140 + + IA + S QSFSR F+ +FG P +YR + S + E Sbjct: 61 SMPIAQIAERSGYSSLQSFSRTFRAVFGVPPAQYRSQGTHSRFRPALSGDDQMTMIREVV 120 Query: 141 LINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKSV 200 + I + L + + + V +P Sbjct: 121 IRYVEPMEILSVDHVGSY---MQIGKAFDALFGWLAKHNLLAGQMRMIGVYFDDPGVVEE 177 Query: 201 DLLTVETFA---GTVCEYADMPKEW-------TTTRGLYDPTHVI 235 L + G V G Y + Sbjct: 178 QALRSKAGVLLPGPVMTEVAAGVGMGGAVSVTRIRGGEYAVLRHV 222 >UniRef50_Q7MF47 AraC-type DNA-binding domain-containing protein n=22 Tax=Gammaproteobacteria RepID=Q7MF47_VIBVY Length = 294 Score = 155 bits (393), Expect = 9e-37, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 77/233 (33%), Gaps = 16/233 (6%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 + +L +I ++ +S + +A + YS ++ +F+ + + +YIR+ R+ Sbjct: 7 SQQHISRINDVLYFIHQDISRELSAKALADVAAYSEQHFHRVFKQVVGESIHQYIRRTRM 66 Query: 71 CRAA-ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR--------HRDYWD 121 AA L+ T S+LDIA F S SFSR FK F +P E+R D Sbjct: 67 EYAANQLMFDTRSSVLDIANKCGFSSVSSFSRAFKATFSMAPGEWRYHDLHISDKPYLKD 126 Query: 122 LANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMK 181 + ++ E ++ PE + Sbjct: 127 PEVAAGYHRVAKRTLPEPKITEVPERMAAYVRHVGYNRSIKNAWLILKAWANSEGRSF-- 184 Query: 182 NFKTDIYFVSTFEPSTKSVDLLTVETFAGTVC--EYADMPKEWTTTRGLYDPT 232 + + P+ +D +Y + + GL+ Sbjct: 185 ---EVQFGLHHSNPAWVELDKCRYVACIAIDKPLKYRGVVNQMVIPGGLHAVF 234 >UniRef50_A8FZF8 DNA gyrase inhibitor n=13 Tax=Gammaproteobacteria RepID=A8FZF8_SHESH Length = 300 Score = 155 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 82/240 (34%), Gaps = 20/240 (8%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 + L+ ++ ++E N P+++ ++A K+ S + +F+ + L EY+R+ RL Sbjct: 2 RTDYLQRLKPVIRYLEQNFNQPLNLPEVAAKANISPYHFHRIFKAVTNETLAEYLRRLRL 61 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH-----------RDY 119 R A + S+ ++AL F S QS ++ FK+ FG +P E R R+ Sbjct: 62 ERIATDLFYKQVSITELALENGFSSSQSLAKAFKQRFGLTPSELRECESNEKLCQLMRNS 121 Query: 120 WDLANIFPSFLIRQQQKT------ECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRR 173 + Q + + R + T I + Y E ++ Sbjct: 122 KIGHTLRNIGNANQSETPYHGDIDQQRRVTMETTTIEAGTLAYIRVTGPYGQGYEEAMKH 181 Query: 174 H-HLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADM--PKEWTTTRGLYD 230 A + F+ P + + + + G Y Sbjct: 182 LCTWAGAKGFSCENAIFIYHDNPEITPDEKCRTDICFRVPADTQASGRVELQVFPGGSYA 241 >UniRef50_A0KJN2 Transcriptional activator n=5 Tax=Gammaproteobacteria RepID=A0KJN2_AERHH Length = 325 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 53/235 (22%), Positives = 103/235 (43%), Gaps = 19/235 (8%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 + ++++L++I NL+ P+ + ++A++S +SR +Q +F + + + Y+R+ +L +A Sbjct: 43 QLTRIERVLDYIHANLDLPLGLAELAEQSCWSRWQLQRVFLHETGLTVAHYVRELKLSQA 102 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQ 133 A + + +LD+AL F S+ SFSR FK+ FGCSP YR R L P Sbjct: 103 AEALLSGRQRVLDLALCYGFGSEVSFSRAFKQQFGCSPLAYRKRGLR-LGLRTPLVRAAL 161 Query: 134 QQKT-----ECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIY 188 Q + R+ + P + G + + +PD + + + R ++ Sbjct: 162 PQPMPARLVQVRIESPPGFILQGVKGQIR-GLFAAAPDFQQTVP--AIWRALRTAGGLPP 218 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGL-----YDPTHVIWTQ 238 S ++ +AG+V E + GL T+ + + Sbjct: 219 GQERVGVVDVSGAGESLPYWAGSVMEEGA-----SLPAGLARLPVPAQTYAVLSH 268 >UniRef50_A5V467 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V467_SPHWW Length = 296 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 66/110 (60%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 ++ +LQ++ +++E ++ IS++ +A+++G SR + LF++ + + Y+ + Sbjct: 186 AARSVLSSPVLQRVKDYVEAHIAEDISLDMLAREAGVSRFHFIRLFKDSVGMTPHAYLIE 245 Query: 68 RRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 RR+ RA L+ T +S+ +IA++ F+ F+ F++L+ PRE+R R Sbjct: 246 RRMVRACNLLMHTKQSIGEIAVNCGFEDPSYFAARFRRLYRMCPREFRKR 295 >UniRef50_C7X8J2 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C7X8J2_9PORP Length = 280 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 84/227 (37%), Gaps = 4/227 (1%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 + E I Q+ + Q++++I NL P+ ++ IA + S R + + + ++ L Y+ Sbjct: 2 KPDTENIYQRKINQVIDYINANLHLPLRLDIIAGQVNVSERQLLRIMKGALNESLYAYVA 61 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIF 126 ++R+ RA + + S+ D+A + +D+ QSFS+ FKK F SP+ Y D Sbjct: 62 RQRVERAVLYMHTEDMSLADLASRVGYDNPQSFSKAFKKQFSVSPKAY--MDKLRARLRE 119 Query: 127 PSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTD 186 + E + + + + + L + T Sbjct: 120 ETEKWSNPHDLEVEVCEVDDLDLVYIRIFGKYGEAEPYEEAWNLLIGFLKENQALSEDTR 179 Query: 187 IYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTT--RGLYDP 231 +S +P+ D A E T +G Y Sbjct: 180 FIGLSFDDPNVTHPDQCRFYACASVGKEIIPSGMFGTIRLQKGKYAV 226 >UniRef50_A8FAK8 Possible AraC family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FAK8_BACP2 Length = 295 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 65/107 (60%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 + +K +Q+ L +IE +L+ + ++ +A+ +GYSR + +F+ + + +Y+R+RR Sbjct: 2 SYQEHEKTIQETLNYIEQHLKDDLPLQTLAKHAGYSRFHFHRIFKKVIKKSVVDYLRERR 61 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 + +AA + T + +DIA F SQ+SF+R FKK++ SP YR Sbjct: 62 MTQAAKDLIHTDQRAIDIAFQYRFSSQESFTRAFKKIYDMSPARYRK 108 >UniRef50_C6QRS7 Two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QRS7_9BACI Length = 269 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 67/129 (51%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 +N + K++Q L +IE N ++ I++E++A+ S + LF+ + + Y+ + Sbjct: 140 AKNSIQDGKVIQSALNYIEENYQNGITLEEVAEHVHISPFYLSKLFKKELKMNFVSYVTE 199 Query: 68 RRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFP 127 +++ +A L+ T ++ IAL L++ FS+ FKK+ G +P EYR R L+ Sbjct: 200 KKMQKAKELLENTDLPVIHIALELNYQEPNYFSKVFKKVVGITPSEYRKRSKKGLSKKKH 259 Query: 128 SFLIRQQQK 136 + ++ Sbjct: 260 NSVLNGNWL 268 >UniRef50_Q21DM1 Transcriptional regulator, AraC family n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21DM1_SACD2 Length = 287 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 86/226 (38%), Gaps = 8/226 (3%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 I + + ++++I N+E + + +A + +S + ++R MH + +R+ RL Sbjct: 9 IYRDRILAVVDYIWRNIERDVELNTLADVAHFSPYHFHRIYREMMHETVSTTVRRLRLHY 68 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIR 132 AA + T S+ IA +L + S ++FSR F + + +P YR + L + R Sbjct: 69 AACQLLRTNHSVETIATTLGYGSGEAFSRAFSRAYTVTPSAYRQQ-RSPLPEAKMALPSR 127 Query: 133 QQQKTE--CRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFV 190 + + + F + + G + + D K+ ++ N + + + Sbjct: 128 RFYAMKHTVDIEKFNKVELGGLAHQGDYL---DIGAVFEKVFVSAGSKQFLNEHSRSFGI 184 Query: 191 STFEPSTKSVDLLTVETFAGTVCEY--ADMPKEWTTTRGLYDPTHV 234 +P++K L + T G + Sbjct: 185 YYDDPTSKDKSALRSHACVTLNPQQVKEAGLDYLTLEAGNHAVLTF 230 >UniRef50_C0A4C8 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A4C8_9BACT Length = 309 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 59/101 (58%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 L+++ +++E +L+ ++++A+++G S+ + LFR + Y + R+ A L+ Sbjct: 209 LRRITDFMEAHLDEEFRLDELAREAGMSKFHFCRLFRKTTGLSPSRYFIRLRMEMARRLL 268 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 R T++S++++ L + + S F++ F++ G P EYR + Sbjct: 269 RETSRSVIEVGLEVGYSSPSHFAQVFQREAGVPPSEYRRQG 309 >UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABU8_9CLOT Length = 412 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 57/109 (52%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 NE ++Q+ + +I + I++E IA + +F+ + V Y+ K R Sbjct: 304 NESKNPVLIQKCISYINEHYNEDINLETIANIVHLNPSYFSSIFKKEVGVSFSNYLNKIR 363 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 + ++ +L++ T S+++IAL + F+ Q FS+ FK L +P++YR Sbjct: 364 IEQSKLLLKNTDSSIVEIALEVGFEDQSYFSKVFKNLTKMTPKQYRQNG 412 >UniRef50_A9KR14 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KR14_CLOPH Length = 281 Score = 153 bits (387), Expect = 5e-36, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 89/210 (42%), Gaps = 5/210 (2%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M L + L++IE NL + I + A+ + SR ++ +F + L EYIR+RRL Sbjct: 1 MDWNIRLNRALDYIEENLSNEIDFDYAAKLALCSRNDLSNMFFIVTGIQLSEYIRRRRLS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW--DLANIFPSF 129 AA+ ++ + + +++I++ + S +F+R F+ SP+ R R + I Sbjct: 61 LAALELQNSDEKIINISMKYGYSSPTAFNRAFQNQHKVSPQYARSRKIFINSYPRITFQI 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEV-SNKSPDEEVKLRRHHLARCMKNFKTDIY 188 ++ + +CR+ + G + ++ N P L + + +K + Sbjct: 121 ILNGEINMKCRIEKKEAFKVVGAKKTFRNDMVENLLPHFWRDLPQETYEKIIKQSNGEPK 180 Query: 189 FVSTFEPSTKSVDLLTVETFAGTVCEYADM 218 + T + + T + +++ Sbjct: 181 GLLGLCA--NFGGEHTFDYYIATSTKNSEV 208 >UniRef50_C8N9B6 AraC family transcriptional regulator n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9B6_9GAMM Length = 263 Score = 153 bits (387), Expect = 5e-36, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 83/222 (37%), Gaps = 21/222 (9%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 + ++ + L ++E + I ++ IA +G S + L+R+ M L ++ R Sbjct: 2 KKRHYEQRFLRALHYLENHYTDSIDLQRIADAAGLSPWHWHRLYRDVMGETLHTTVKWMR 61 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSF 129 L RAA L+ T K DIA +++ QSF+R F+ +G SP++YR R +P Sbjct: 62 LHRAAWLISYTDKPFADIARECGYNNAQSFARSFRDAYGLSPQQYRERP----PPRYPVH 117 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 L + T L + E G++F + E + R + + D + Sbjct: 118 LETRAPVTVAMLAHSGECQRLGDTFYQLESLLRLRGAETSQARAFSIHPAIDPLHADKHV 177 Query: 190 VSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDP 231 ++ P L G Y Sbjct: 178 AASVAPEYAMAPLQA-----------------GEIAGGRYAV 202 >UniRef50_Q13JQ4 Transcriptional regulator, AraC family n=11 Tax=Proteobacteria RepID=Q13JQ4_BURXL Length = 281 Score = 153 bits (386), Expect = 7e-36, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 83/226 (36%), Gaps = 13/226 (5%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 + + L +IE + +++++IA SR ++ F + Y+R RRL A Sbjct: 4 HMNPVGKALWFIESHFARELTLDEIANCGCVSRFHLARAFEAATGFSVMRYVRGRRLSEA 63 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQ 133 A + A +L +A+ + S ++F+R F++ FG +P R R + D + + + Sbjct: 64 ARRLASGAPDILAVAIDAGYGSHEAFTRAFREQFGLTPDALRARGHLDNLALVEPIKMDE 123 Query: 134 QQKTE---CRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFV 190 T R + + G + +Y E P + + Sbjct: 124 TLLTRLEPPRFEDGKAFLVAGLNERYTNETCAAIPSQ-----WQRFGDYFGKVPGQV-GN 177 Query: 191 STFEPSTKSVDLLTVETFAGTVC-EYADMPKEWT---TTRGLYDPT 232 + + D ++ G +++ +P E + + Y Sbjct: 178 VAYGVCYNADDNGNIDYLCGVEVSDFSALPAELSRLRISPQRYAVF 223 >UniRef50_B8I4L9 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I4L9_CLOCE Length = 452 Score = 153 bits (386), Expect = 7e-36, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 10/233 (4%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +Q+ +++IE N+E+ I+I+ AQ + S N +F + EYIR RR+ Sbjct: 1 MNYYERIQKSIDYIESNVENKINIDFAAQTAFMSLSNFYRMFFALTGYSVKEYIRLRRIS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 AAI ++ T ++DIA+ F+S SFSR FK++ G P +YR + Sbjct: 61 LAAIDIQGTDTCLIDIAIKFDFESGDSFSRAFKRITGFLPSDYRKKKSLYKFERIDIMEK 120 Query: 132 RQQQKTECRLINFPETPIF----GNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDI 187 + + + N+P+ + Y + + L + N Sbjct: 121 YFDIQDKELIENYPDIKVLKEMEPTRVAYFCYYGKQPEHHAFTVMAQWLNKNGLNVNEQN 180 Query: 188 YFVSTFE------PSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHV 234 + + P + T A + D+ KE GLY T+V Sbjct: 181 LRIFGYNNPSPASPDEEEYGYEVCATVADNIVVNDDLVKEKVLGGGLYAVTNV 233 >UniRef50_A7JZZ4 Putative uncharacterized protein n=3 Tax=Vibrio RepID=A7JZZ4_VIBSE Length = 310 Score = 153 bits (386), Expect = 7e-36, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 96/243 (39%), Gaps = 27/243 (11%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + +L++I NL+ +S+++I++ S +SR +Q +F+ V + YIR+ +L AA Sbjct: 12 NRIHSVLDYIHNNLDIALSVDEISKASCWSRWQLQRVFQQHTGVSVAHYIRELKLSLAAE 71 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQ 135 + T+ LDIA+ + F S+ +FSR FK +F SPR+YR L + +R Sbjct: 72 RLIHTSDRSLDIAIEMGFASEHAFSRAFKNMFSKSPRDYRKAQ--QLTGLRQPLTLRDTP 129 Query: 136 K--------TECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDI 187 + E R+ P + G + + + +P+ + K+ T + Sbjct: 130 EDENRHKCFIEVRIETKPAFVLAGY-HEPIYGLFSATPNFQSKVPSLWSQLYSSENHTHL 188 Query: 188 YFVSTFEPSTKSV--DLLTVETFAGTVCEYA----------DMPKEWTTTRGLYDPTHVI 235 +E +AG A P + T+ + Sbjct: 189 ERNYLGVIDVTKAYSSNQQLEYWAGYEYNSASRTSIYKGSTQEPDLLVVP----EQTYAV 244 Query: 236 WTQ 238 T Sbjct: 245 ITH 247 >UniRef50_Q2B3U5 Transcriptional regulator (AraC/XylS family) protein n=2 Tax=Bacillus RepID=Q2B3U5_9BACI Length = 297 Score = 152 bits (385), Expect = 7e-36, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 93/216 (43%), Gaps = 21/216 (9%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 I+Q+ +E IE +L +S++ IAQ +G+S+ + +F+ + V + EYIR RR+ + Sbjct: 6 YSSIIQKSIEHIESSLHEDLSLDHIAQTAGFSKFHYHRIFQKEVGVTVSEYIRYRRIANS 65 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH-----RDYWDLANIFPS 128 A ++ T + +LDIAL F+SQ++F+R FKK + P +YR + + N+ Sbjct: 66 AHMLLYTDEKILDIALYFQFESQEAFTRSFKKYYHLPPGKYRKLIGKLAEQKEEKNMDKE 125 Query: 129 FLIRQ---------QQKTECRLINFPETPIFGNSFKYDIE-------VSNKSPDEEVKLR 172 + + F + G +E + + + + + Sbjct: 126 QKPKGWVLSGSHPFNYQMGIDHETFHKGKSSGYLQSQTVEAPGEFATMMQEINAKNYRGK 185 Query: 173 RHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETF 208 R + +K+ D + S ++L + Sbjct: 186 RLKFSGFLKSNNVDGFCSFWMRVDNASDEVLQFDNM 221 >UniRef50_B7VRB4 Transcription activator n=6 Tax=Vibrionales RepID=B7VRB4_VIBSL Length = 290 Score = 152 bits (385), Expect = 8e-36, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 95/233 (40%), Gaps = 24/233 (10%) Query: 22 LEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTA 81 + +I NL +S+ED+A +S +SR +Q +F+ + + Y+R+ +L +AA + Sbjct: 1 MAYIHANLSSALSLEDLATQSCWSRWQLQRVFQAETGLTVANYVRELKLSQAAEELLDGK 60 Query: 82 KSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQ------- 134 ++DIAL L F+S+ SFSR FK++FG SP +YR + + + Sbjct: 61 DRVIDIALGLGFNSEISFSRSFKQMFGVSPSQYRKAGKR--VGLKKPIQVSETASNSENR 118 Query: 135 --QKTECRLINFPETPIFGNSFKYD-IEVSNKSPDEEVKLRRHHLARCMKNFKTDIY-FV 190 E R+ + G + + + + ++V L ++ ++ F+ Sbjct: 119 ALSFVEVRIDEREPFLVKGMTSEISGLFSLTQDFAQKVPQLWSRLEGEVEIPDANMLQFI 178 Query: 191 STFEPSTKSVDLLTVETFAGTVCEY-----------ADMPKEWTTTRGLYDPT 232 + + D + +AG +D + T + Y Sbjct: 179 GVVDLTQSCFDGTNIYYWAGVELHDEISIPQLPSIISDKLEVLTIPKQTYAVV 231 >UniRef50_C5D8H7 Two component transcriptional regulator, AraC family n=3 Tax=Geobacillus RepID=C5D8H7_GEOSW Length = 515 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 56/111 (50%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 + + ++I+ + HP+++E++A+ G S LF++ + +Y+ + R Sbjct: 403 RHQQANGKIGKAKDYIDEHYHHPLTLEEVAEYVGISPYYFSKLFKDRFGMTFIDYVTEVR 462 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 + RA + KS+ +I + ++ FSR FKK G SP EYR + ++ Sbjct: 463 IARAKKEMADPNKSLKEICFLVGYNDPNYFSRVFKKHTGMSPTEYRKKLHF 513 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 35/111 (31%), Positives = 60/111 (54%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 E E R + L+ ++E+IE N PI ++ +A+ + S F+ EY+ Sbjct: 179 KPEQEGYRIERLKTVIEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMN 238 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 R+ +AA +R T ++++AL + F+S F+ F++ FGC+PREYR R Sbjct: 239 SYRVQQAASRLRQTDAKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSR 289 >UniRef50_Q6WFA3 Putative transcription factor Roh n=1 Tax=Enterobacter cloacae RepID=Q6WFA3_ENTCL Length = 134 Score = 151 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 47/128 (36%), Positives = 82/128 (64%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 + +++ +++W+E +L + +E+IA+KSGYSR + Q +F++ + LGEY+R RR Sbjct: 3 TKTYADSVVKDIVQWVENSLTSTLLVEEIAEKSGYSRWHFQRIFKHATGIALGEYVRARR 62 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSF 129 L AA+ ++LT K++L+IAL F+SQQ+F+R FK F P YR + W+L+ + P Sbjct: 63 LTCAAVELKLTTKTVLEIALHYGFESQQTFTRSFKNKFHLPPGRYRKQIAWNLSALCPPL 122 Query: 130 LIRQQQKT 137 L+ ++ Sbjct: 123 LLEHEENF 130 >UniRef50_A8I184 Transcriptional regulator n=3 Tax=Rhizobiales RepID=A8I184_AZOC5 Length = 310 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 60/110 (54%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 ++ + +++++++I NL IS+ D++ + S + FR+ + VP +I Sbjct: 198 RQSPTVEHTKMRRVIDYINDNLASEISLSDLSDIACLSHHHFARAFRSAVGVPPHRFISS 257 Query: 68 RRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 RL RA ++ T S+ +IA S F SQ +F+R F++ G SP EYR + Sbjct: 258 LRLQRAQEMLAHTQSSLTEIAYSCRFSSQSTFTRAFRRHVGMSPGEYRRK 307 >UniRef50_A6TUU5 Transcription activator, effector binding n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TUU5_ALKMQ Length = 291 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 93/236 (39%), Gaps = 8/236 (3%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 N+ + + ++ ++IE +L+ ++++ ++Q++ +S + Q ++ + L +I++ Sbjct: 3 ANNKNTYVEQINKVQDYIENHLDESLTVKRLSQRANFSEYHFQRIYGSMTGESLYGFIKR 62 Query: 68 RRLCRAAI-LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIF 126 RL +AA L+ + ++DIA+S+ F +Q SF++ FK +G YR + F Sbjct: 63 IRLEKAAHILLFDKDRPIIDIAMSVGFSNQTSFAKAFKSKYGVCSSSYRKTNGTVSETDF 122 Query: 127 PSFLIRQQQKT----ECRLINFPETPIFGNSFKYDIE-VSNKSPDEEVKLRRHHLARCMK 181 + + Q T + + + + + S + KL + R + Sbjct: 123 VNKYLDNQDMTIDPLKIEIRREKAIKLIYTRYTGPYKRDSELFSNLFQKLYQWADQRRLI 182 Query: 182 NFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTT--RGLYDPTHVI 235 + + + + + D L + A G Y + Sbjct: 183 SSTSRWFVIYHDFGNETDEDQLRLSVCMSVDRNLAVSGDIGILNLHEGQYAVGSFM 238 >UniRef50_C6PVM8 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=C6PVM8_9CLOT Length = 277 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 91/228 (39%), Gaps = 18/228 (7%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 MI K++ Q +++I +L+ ISIED+A +S+ +F+ + +I++ ++ Sbjct: 1 MITNKLVNQSIDYIMRHLDEEISIEDVADYCHFSKYYFSRVFKKETGESIYAFIKRLKME 60 Query: 72 RAAILVR-LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH-RDYWDLANIFPSF 129 ++A+ ++ KS+ DI + S ++S FKK SP E+R ++ + + F Sbjct: 61 QSALNLKIEKDKSITDIGYDYGY-SPSNYSSAFKKHHNISPAEFRKSKNTTCVPHPFYQD 119 Query: 130 LIRQQQKTE-----CRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFK 184 + + Q E + + + + + K+ + + + FK Sbjct: 120 KLAKFQSFEEYDQRILIQELDDFVVIYERYIGNYIELGKNWYDFTE-------KYKDYFK 172 Query: 185 TDIYFV--STFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYD 230 D + +PS S+D + + T G + Sbjct: 173 EDTLLIERFYDDPSITSLDQCLYDICMTVDKN-CSLDNVTTIQGGKFA 219 >UniRef50_Q7NYH2 Probable bacterial regulatory helix-turn-helix proteins, araC family n=1 Tax=Chromobacterium violaceum RepID=Q7NYH2_CHRVO Length = 284 Score = 150 bits (380), Expect = 3e-35, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 85/237 (35%), Gaps = 16/237 (6%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 MR+ + L + L+++ +L+ P+ ++ +A+++ +SR + L+RN M Sbjct: 1 MRHAYRQFGPGTLYTVRLLRALDYLWRHLDEPLLLDRLAEEACFSRFHFHRLYRNLMGET 60 Query: 61 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 + E ++ L RAA + + + +A+ F S +F R F +G +P YR R Sbjct: 61 VMESRQRMLLHRAAGELGRADRPLASVAVRAGFSSSAAFIRAFAGRYGETPGRYRQRRL- 119 Query: 121 DLANIFPSFLIRQQQKT-ECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARC 179 FL ++++ + ++ + + + LR + Sbjct: 120 -------MFLNQRERTMRQVEIVERDAVKVLMRHHRGPY---MEIGKAFDALRAVQGPQQ 169 Query: 180 MKNFKTDIYFVSTFEPSTKSVDLLTVETFAGT----VCEYADMPKEWTTTRGLYDPT 232 + + + + + A + D + + G Y Sbjct: 170 GVGAPSRSFGLYLDDQAQTPAADCRSIACATVPAFMEGKAMDGFEWGSIPAGRYAAV 226 >UniRef50_A8RX40 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RX40_9CLOT Length = 140 Score = 150 bits (380), Expect = 3e-35, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 65/117 (55%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 ++ +++++++IE +LE +++E IA+ +GYSR ++ +F + +Y+++RRL Sbjct: 3 NQKHTVRKVIDYIEEHLEEKLNLEQIAEHAGYSRFHLNRIFMEETGGTIHKYVQERRLTM 62 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSF 129 AA + T + IA + SQQ+FS FK+++ C P YR R + A Sbjct: 63 AAEKLVDTDMDITQIAYDAGYQSQQAFSLAFKQVYLCPPGAYRKRGIYLPAKKRIQM 119 >UniRef50_B4WW69 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WW69_9SYNE Length = 291 Score = 150 bits (380), Expect = 3e-35, Method: Composition-based stats. Identities = 35/101 (34%), Positives = 57/101 (56%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 + L + +I LE I + D+AQ G S+ + F+ M + +Y+ ++R+ RA Sbjct: 189 DRKLLLVTRYIADALEQDIKLADLAQLVGVSQSHFSRQFKKSMGLTPYQYLLQQRIERAK 248 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L++ T +S++DIAL FDS FSR+F+K G +P YR Sbjct: 249 QLLKQTQQSLVDIALVCGFDSHSHFSRQFRKATGMTPSAYR 289 >UniRef50_D0YAG4 Transcriptional regulator, AraC family n=6 Tax=Klebsiella RepID=D0YAG4_KLEVA Length = 299 Score = 150 bits (379), Expect = 4e-35, Method: Composition-based stats. Identities = 74/228 (32%), Positives = 113/228 (49%), Gaps = 6/228 (2%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 ++Q + ++L W+E N+ SI+D+AQ GYSRR + +F + +P+G+YIR RRL Sbjct: 1 MKQMLYLKMLAWLEDNIYCNPSIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTI 60 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIR 132 AA+ +RLT + + IA L +DS Q+FSREFKK F SPREYR +WD A + F Sbjct: 61 AAVSLRLTRQPIAAIAWQLSYDSPQTFSREFKKRFSLSPREYRCAVHWDTALLLKKFDPE 120 Query: 133 QQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLR-RHHLARCMKNFKTDIYFVS 191 + + R + PE G+ KY++ +S+ K R + R + +S Sbjct: 121 GESLPQARFCSLPERVYRGSPMKYELRLSDMVLQSTSKTAVRQKVDRFFTAGGGRLSVLS 180 Query: 192 TFEPSTKSVDLLTVETFAGTVCEYADMP-----KEWTTTRGLYDPTHV 234 + + + + V F G E +P TT GLY Sbjct: 181 DYYAARNNELNVEVNAFVGCHRERGALPALTTNSTLTTRPGLYVGVEF 228 >UniRef50_B5EUU0 Transcriptional regulator, AraC family n=3 Tax=Aliivibrio RepID=B5EUU0_VIBFM Length = 299 Score = 150 bits (379), Expect = 4e-35, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 22/234 (9%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 ++ +L +I N++ P+++E +A+ S +SR +Q +F+N+ + + +Y+R++RL +A+ Sbjct: 12 NRIENILVFIHQNIDKPLTVEILAEMSCWSRWQLQRVFQNYTGMNVAQYVREQRLSMSAL 71 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQ 135 V K MLDIA S F S+ +FSR FK+ F SPREY+ + + Sbjct: 72 EVLDKKKRMLDIAYSYGFTSEIAFSRAFKQYFHKSPREYQKQAKKIGIQKPFLKQVNVDP 131 Query: 136 KTE-----CRLINFPETPIFGNSFKYDIEVSNKSPD-EEVKLRRHHLAR---CMKNFKTD 186 RL P + G S + +S+ E+V + L + + Sbjct: 132 LLNSHFYRVRLEYKPSFKVLGLSTRLQGILSDTPDFNEKVPSVWNALDTSIVYLPSIPEQ 191 Query: 187 IYFVSTFEPSTKSVDLLTVETFAGTVCE---------YADMPKEWTTTRGLYDP 231 Y V T+ + ++ +AG CE + + T Y Sbjct: 192 KYAVI----DTREENADSLLYWAGINCEALSTDELNQHKADLQIITIPEQEYAV 241 >UniRef50_Q2BBL2 Transcriptional regulator, AraC family protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BBL2_9BACI Length = 311 Score = 150 bits (379), Expect = 4e-35, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 87/244 (35%), Gaps = 33/244 (13%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + ++LE+I+ +L+ + +E +A+ S YS + Q +F++FM YI++ RL AA L+ Sbjct: 10 ITKVLEYIDQHLQDTLPLEKLAKVSTYSPFHFQRIFKSFMGESPAAYIKRLRLENAAHLL 69 Query: 78 RL-TAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQK 136 + ++AL F S F+ FK+ F SP+++R Y +L + + Sbjct: 70 IYEREIPITEVALMCGFSSISYFTYSFKENFSTSPKKWREGAYLELFPRVYQDSKKSKLF 129 Query: 137 TECRLINFP------------------ETPIFGNSFKYDIEVSNK-SPDEEVKLRRHHLA 177 + + E P+ + + + PD L + Sbjct: 130 SNIKKEEQQQNPYNEFRWLDLDKVRTIELPVCATVNRQSVGPYTEGIPDAWEDLYHWTTS 189 Query: 178 RCMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYD-----PT 232 R + + V P + + + G Sbjct: 190 RELMKPDPFTFGVPRNNPYITPPEKTRYDCRIAIDQD--------KIPEGEPAFLFKGGK 241 Query: 233 HVIW 236 HV++ Sbjct: 242 HVVY 245 >UniRef50_C2G4Y4 AraC family transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C2G4Y4_9SPHI Length = 278 Score = 150 bits (379), Expect = 4e-35, Method: Composition-based stats. Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 11/217 (5%) Query: 22 LEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTA 81 L +IE N + ISIE + S YS RNIQ +FR +G Y ++ R+ A ++ + Sbjct: 16 LSFIEKNYDQLISIEQLEDISHYSYRNIQRIFRYTCGETIGAYQKRLRVENAYKILLYSD 75 Query: 82 KSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKTECRL 141 S+ IAL + F + SFS+ FK+ F SP+E R L + Q + ++ Sbjct: 76 HSISAIALKVGFSNVASFSKAFKQHFLISPKEAR-AGKTPLFMKADILPVEATQILQPQI 134 Query: 142 INFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKSVD 201 I T ++ Y N E L D Y + EP + Sbjct: 135 IYVRPTTVY-----YRSSFINYIDTEIESQWDTFLQNEFPEQGNDFYGIVADEPLIRENL 189 Query: 202 LLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWTQ 238 +T + + +P + T G Y +T Sbjct: 190 NCRYDTCSSLQSLTSRLPSK-TIGGGKYAQ----FTH 221 >UniRef50_B7DU32 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DU32_9BACL Length = 334 Score = 150 bits (379), Expect = 4e-35, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 59/116 (50%) Query: 4 DKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGE 63 L ++ R +I+Q +++I+ +L +S+ IA S ++ LFR M + L Sbjct: 214 TPRLEPSKSPRSRIIQAAVDYIQSHLADELSLTRIAVYCSVSTYHLSHLFRKEMGMTLTA 273 Query: 64 YIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 +I+ RL +A L+ ++ ++ +IA + F FS+ F+ +G P EYR + Sbjct: 274 FIKSLRLKKARELLLNSSLTVSEIAYQVGFSDPNYFSKTFRVTYGLPPSEYRSHRH 329 >UniRef50_B0C647 Transcriptional Regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C647_ACAM1 Length = 204 Score = 150 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 61/101 (60%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q+ L ++L++I+ +L + I++ D+A S+ + LF+ + +Y+ +R+ RA Sbjct: 102 QRQLLKVLDYIDAHLGNEITLADLAVLVDISQFHFGRLFKQSLGRSPYQYLMLQRVERAK 161 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L++ T + +++IAL F+S F R+F+++ G +P+ YR Sbjct: 162 TLLKRTNQPIVEIALECGFNSHSQFGRKFRQMTGMTPKVYR 202 >UniRef50_B4WTP1 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WTP1_9SYNE Length = 294 Score = 150 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 61/108 (56%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 + + + L++++++IE NL +SI D+A + S+ F+ + + +Y+ ++ Sbjct: 186 KASGLSRSQLKRVIDYIEANLAQDLSIFDLASLTNMSKSYFSRSFKQSVGISPYQYVIQQ 245 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 R+ RA L++ + S+ DIAL F +Q ++ F+++ G +P+ Y+ Sbjct: 246 RVERAKQLLKQQSISISDIALDCGFANQTHLTKAFRQMTGTTPKAYQK 293 >UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32_CHLAA Length = 1202 Score = 150 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 34/102 (33%), Positives = 56/102 (54%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 Q ++++ + +I + HP++ +DIA G S + FR + EY+ + R+ +A Sbjct: 1094 QMLVRKAMAYIHSHYTHPLTRQDIAHYVGMSEDYLTHCFRQELGTTPVEYLNRYRVLQAR 1153 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 L+ + KS+ +IAL + F S FSR F+K G SP EYR Sbjct: 1154 HLLAESDKSITNIALEVGFSSSSYFSRVFRKEVGQSPEEYRR 1195 >UniRef50_A9D6E7 Putative AraC family transcriptional regulator n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D6E7_9RHIZ Length = 283 Score = 150 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 73/221 (33%), Gaps = 7/221 (3%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 ++ L+++ + I NL+ P++++D+A + SR + +R + + +R+ RL R Sbjct: 9 DYRERLERVRKHIHENLDGPLNLDDLADIACLSRFHWHRTYRGLTGETVWQTVRRLRLHR 68 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIR 132 AA + ++ I + + ++FS+ FK +G P +R+R Sbjct: 69 AAAELANGTLAIEQIVARSGYTNSRAFSQAFKADYGLPP--FRYRAEGGHRRYENPEWQE 126 Query: 133 QQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVST 192 + R+ + G K + + I Sbjct: 127 SDTMYDVRIEEMGPAKLVGFEHTGPYTE---IGSAFEKFYAEVGPANLASQAMAIAAAYF 183 Query: 193 FEPSTKSVDLLTVE--TFAGTVCEYADMPKEWTTTRGLYDP 231 +P + + + A + G Y Sbjct: 184 SDPDITAPEECRSLAGMIVSPGLDVAGGFDRFDILAGRYAV 224 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 150 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 60/114 (52%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 E ++ +++LLE++E + I++ED A+ YS + F+ +M VP +Y Sbjct: 222 PEAAGQPRKSRERMKRLLEYMEEHYGEKITVEDGAELCFYSNSHFMKYFKQYMGVPFIQY 281 Query: 65 IRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 + + RL +AA ++ T + +A FD+ F+R F++ +G +P EYR Sbjct: 282 LNEFRLEKAAGMLLTTPDPVTAVAQRCGFDNISYFNRLFRRKYGKTPGEYRKNG 335 >UniRef50_B9MLQ2 Two component transcriptional regulator, AraC family n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLQ2_ANATD Length = 519 Score = 150 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 1/114 (0%) Query: 3 YDKELTENEMI-RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPL 61 + K T++E I + + +E+I N I++ I+ ++ LF+ + V Sbjct: 397 FSKAKTKHEQIINNDSINKAIEFINQNYSEEITLSQISSTFNFNPYYFSKLFKKYTGVSF 456 Query: 62 GEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 Y+ K R+ +A L++ T+KS+ +I+ ++ F F + FKK G +P +R Sbjct: 457 KTYLTKLRIQKACQLLKNTSKSIKEISFAVGFSDPNYFIKAFKKFTGMTPSAFR 510 >UniRef50_D1WZP5 Transcriptional regulator, AraC family n=7 Tax=Actinomycetales RepID=D1WZP5_9ACTO Length = 290 Score = 149 bits (377), Expect = 6e-35, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 89/228 (39%), Gaps = 12/228 (5%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA-A 74 + L + +E IE +L + ++A+ + S + + +F +PL +Y+R+RR+ A A Sbjct: 3 ERLNEAMEHIEAHLGERVEAAELARIAMTSEYHFRRMFSALAGLPLSDYVRRRRMTVAGA 62 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD--YWDLANIFPSFLIR 132 ++ +++LD+A+ +D+ + F+R F+ + G P E R + ++ Sbjct: 63 EVLGAPDRTLLDVAVRYGYDTGEGFARAFRAVHGIGPGEARRSGAVLRSQQRLTFRLVVE 122 Query: 133 QQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLR------RHHLARCMKNFKTD 186 + RL+ + G + + +P +R +A Sbjct: 123 GSTAMQYRLVEKDAFRVVGRRARVPLVHEGPNPAIAEFIRGIGREELDRIAALSDQDPAG 182 Query: 187 IYFVSTFEPSTKSVDLLTVETFAGTVC--EYADMPKEWTTTRGLYDPT 232 + VS + + ++ + G V E + + G + Sbjct: 183 LVGVS-DQLDPSRAEGTELDYYHGVVSGAEPPEDLDSLSVPAGSWAVF 229 >UniRef50_B1JSX5 Transcriptional regulator, AraC family n=16 Tax=Burkholderia RepID=B1JSX5_BURCC Length = 293 Score = 149 bits (377), Expect = 6e-35, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 75/223 (33%), Gaps = 9/223 (4%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 + ++ +I +L+ P+ + +A+ + S + Q ++R + +R+ R+ RA Sbjct: 16 YAASVARVHAYISAHLDGPLDLNRLAEVACLSPYHWQRVYRALYGESIVLTVRRMRIVRA 75 Query: 74 AILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQ 133 + + TA+ + +IA + S +F+R F+ +G P ++R Sbjct: 76 SEDLVCTARPLDEIARRAGYGSTHAFARAFRDAYGVLPAQHRRTGTHRPIYPLQRGEADM 135 Query: 134 QQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTF 193 + E + P + + + + H + + + Sbjct: 136 FKH-EVEIRRLPALRGYAVTHTGAYMKVGDAFERIGAWVGQH---GLIGPGAKMIGIFYD 191 Query: 194 EPSTKSVDLLTVETFAGTVCEYADM-----PKEWTTTRGLYDP 231 +P T L + D+ + T G Y Sbjct: 192 DPDTTPEAQLRAKACFMPADGAPDIAPVPPVERVTIAGGEYAV 234 >UniRef50_Q17ZV7 AraC-family transcriptional regulator n=7 Tax=Bacteria RepID=Q17ZV7_CLOD6 Length = 289 Score = 149 bits (377), Expect = 6e-35, Method: Composition-based stats. Identities = 50/227 (22%), Positives = 102/227 (44%), Gaps = 10/227 (4%) Query: 18 LQQLLEWIECNL-EHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 +++ L++IE +L + + + I+++ GYS+ ++ +F + + + YI++RRL AA + Sbjct: 8 IEKTLDYIEKHLLDEMLDLNVISKEIGYSKYHLHRMFTSVVGFSVHNYIQRRRLTEAARM 67 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFP----SFLIR 132 + T K +++IAL +D+Q+SFSR FKK+F SP +R + + +R Sbjct: 68 LIFTEKPIIEIALISGYDTQRSFSRGFKKMFKRSPNFFRRHQDFLPLQLKFDIHNRKKLR 127 Query: 133 QQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVST 192 + + +N + I G S K + + L ++ K + VS Sbjct: 128 GDMVLDVKKVNCADINIVGYSGKVR-KGFHIIGKCWRDLHKNKEMIENKVDLGFLIGVSD 186 Query: 193 FEPSTKSVDLLTVETFAGTVC-EYADMP---KEWTTTRGLYDPTHVI 235 + + + T AG + +P +++ + Y I Sbjct: 187 YSNFKEIENTPTFTYIAGAQVATFGKLPNGMEKFVLPKSNYIVFTFI 233 >UniRef50_C5RQY0 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQY0_CLOCL Length = 286 Score = 149 bits (377), Expect = 6e-35, Method: Composition-based stats. Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 2/161 (1%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M L +++IE ++ I++ D+++ + YS + LF +PL EYIRKR+L Sbjct: 1 MDLLTQLNLAMDYIEEHICDDIALADVSEVTTYSSYHFGRLFYYIAEMPLSEYIRKRKLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD--YWDLANIFPSF 129 AA+ ++ ++D+A+ +D+ SF+R F + G +P R + Sbjct: 61 LAAMELQSNDVKVIDLAVKYGYDNADSFTRAFVRQHGVTPTVGRQTGVMLKIFTPLTFQI 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVK 170 I+ Q+ R+ E IFG + + K PD + Sbjct: 121 KIKGVQEMNWRIEQKEEFEIFGIERIFRNDDVGKIPDFWTE 161 >UniRef50_B9YCD3 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B9YCD3_9FIRM Length = 310 Score = 149 bits (377), Expect = 7e-35, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 102/242 (42%), Gaps = 21/242 (8%) Query: 9 ENEMIRQKILQQLLEWIECNL-EHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 E+ ++ + + +++IE +L + + + + GYS+ + LF VP+ YI++ Sbjct: 17 ESMNDNREQISRAVDYIEEHLQDETLDLNAVTAAVGYSKYHWHRLFTALTGVPVHRYIQR 76 Query: 68 RRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFP 127 RR+ AA + TA +L IAL + +Q+SFSR+F+ ++ CSP+ YR R + P Sbjct: 77 RRMSEAARRLVFTADPILRIALDSGYQTQRSFSRQFQAVYHCSPKRYRRRKL--YLPLQP 134 Query: 128 SFLIRQQQ-----KTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKN 182 ++ Q + ++ + + G + R+ H + Sbjct: 135 RLELQNSQPDALRNFKIQIRDEGTITLVGYCAELRHGFG----AIGRTWRKLHQNKSSIP 190 Query: 183 FKTDIYFVSTFEPSTKSVDLLT---VETFAGTVCEYADMPKEWTTTRG-----LYDPTHV 234 ++D F+ T+ + +AG E D + + +G L +V Sbjct: 191 GRSDPDFLIGVHDYTEFSNSQKGPMFTCWAGAQVELLDD-QAQSVPKGMRRLTLPASRYV 249 Query: 235 IW 236 ++ Sbjct: 250 VF 251 >UniRef50_B3QF69 Transcriptional regulator, AraC family n=3 Tax=Rhodopseudomonas palustris RepID=B3QF69_RHOPT Length = 286 Score = 149 bits (376), Expect = 8e-35, Method: Composition-based stats. Identities = 45/224 (20%), Positives = 75/224 (33%), Gaps = 7/224 (3%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 Q L ++ +I NL+ + + IA+ + S + ++ R+ R Sbjct: 2 TRTNYQDRLDRVTSYIHDNLDGELDFDRIAEVASLSPYHWHRIYHACRGETAVATTRRLR 61 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSF 129 L RA++ + T + IA + S +F+R F +G P YR R A+ P Sbjct: 62 LQRASVSLAQTDDPIAQIATKAGYASPAAFTRAFADAYGLPPATYRERG--SHADFRPGQ 119 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 L QQ + F P F L AR + ++ Sbjct: 120 LATQQGGWSIEIQRFDAIPAFAIRHDGPYIE---IGKAFGMLFGQLAARGALPERIEMIA 176 Query: 190 VSTFEPSTKSVDLLT-VETFAGTVCEYADMPKE-WTTTRGLYDP 231 V +P+ ++ L A + D P E G Y Sbjct: 177 VYLDDPTAVPLERLRSFAALAAPGGKDLDPPVERIEIAGGDYAV 220 >UniRef50_C5BEG3 Transposon tn10 tetd protein (Orfr) n=2 Tax=Edwardsiella RepID=C5BEG3_EDWI9 Length = 122 Score = 149 bits (376), Expect = 8e-35, Method: Composition-based stats. Identities = 47/112 (41%), Positives = 71/112 (63%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 + Q ++ L++WIE NL+ I I+DIA+++GYS+ +Q LF+ L Y+RKRR Sbjct: 3 TQGQHQLLVDALIQWIEQNLDKRILIDDIAERAGYSKWYLQRLFKEVTGYSLAAYVRKRR 62 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWD 121 L RAA ++ + K +++I L FDSQQ+FSR FK+ +G SP YR + D Sbjct: 63 LIRAAAELQRSNKKIMEIMLQYGFDSQQTFSRAFKRRYGTSPGSYRQQADGD 114 >UniRef50_A6LY67 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LY67_CLOB8 Length = 291 Score = 149 bits (376), Expect = 8e-35, Method: Composition-based stats. Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 12/217 (5%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + +E++E +L +S+E +A++ +S+ + LF+ + +G+Y KRRL Sbjct: 1 MNTKNYVLDAIEYLEKHLLEGVSLEQLAKQFNFSKFHYARLFKAVLGENIGDYQMKRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 AA+ + T S+L+IA+ + SQ+SF+R FK FG +P++YR + L S Sbjct: 61 IAAMSLLETRDSILNIAIMCGYSSQESFTRMFKAYFGITPKDYRDNEIEYLNLYKYSITQ 120 Query: 132 RQ-------QQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFK 184 TE +I+ I G + D NK D + + Sbjct: 121 EDIERVMSYGTATEYEIIHKNSFEITGLLYHGD----NKKHDVARIFNQTAQKVQLDKIY 176 Query: 185 TDIYFVSTFEPSTKSVDLLT-VETFAGTVCEYADMPK 220 I V + + AG Y Sbjct: 177 NQIDGVYGLDFCKNEEVRSYEFDFIAGIDSRYFSQID 213 >UniRef50_C1I6N3 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I6N3_9CLOT Length = 288 Score = 149 bits (376), Expect = 9e-35, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 97/238 (40%), Gaps = 18/238 (7%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 +M +++ L +IE NL+ I + IA+++GYS + +F+ + + +Y+RKRR Sbjct: 3 DMCYINSIKKALNYIENNLQEDIDLSAIAKEAGYSLYHFHRIFKGIVGDSMKDYVRKRRF 62 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLAN------ 124 AA + T KS+++I + ++S++ FSR F+K++G +P E R + Sbjct: 63 TEAAKELVYTNKSIVEIGIKYGYESREGFSRAFEKVYGRNPSEVRRDNLLYFIREPINVD 122 Query: 125 --IFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKN 182 +F L + R N E + G +K + SN +++ L ++ Sbjct: 123 YMMFQLKLTTEGLTPLYR--NLSERYVVGKKWKVKADGSNL---QDIPLLWQKWNNEKES 177 Query: 183 FK-TDIYFVSTFEPSTKSVDLLTVETFAGTVCEYAD-MPKEWTT---TRGLYDPTHVI 235 K + + G + +P+ LY VI Sbjct: 178 EKIINRKCADEIMGICIFSQGNVFDYMIGHEVNTMEYVPENMVIYRLEPSLYAVFRVI 235 >UniRef50_A4XMF1 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMF1_CALS8 Length = 518 Score = 149 bits (376), Expect = 9e-35, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 57/115 (49%) Query: 4 DKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGE 63 + ++T ++I + + +++I N IS+ I+ ++ LF+ + V Sbjct: 400 NAKVTHEQIIHNDSINKAIDFINQNYNQEISLAQISAIFNFNPYYFSKLFKKYTGVSYKT 459 Query: 64 YIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 Y+ K R+ +A L++ ++KS+ +IA + F F + FKK G +P +R+ Sbjct: 460 YLTKLRIQKACELLKNSSKSIKEIAFMVGFSDPNYFIKAFKKFVGVTPSFFRNMP 514 >UniRef50_B0C4S9 Transcriptional Regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C4S9_ACAM1 Length = 261 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 58/103 (56%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 K L+ +L++I+ NL+ + + D+A S+ + +F+ M VP Y+ +RR+ +A Sbjct: 156 SKRLRNVLDYIDANLDQNMGLADLAAVVDLSQHHFSSMFKESMGVPPYRYVLQRRIQQAK 215 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 L++ + S+ DIAL+ F Q ++ F+K G +P+ YR Sbjct: 216 QLLKNDSLSITDIALTCGFADQSHMTKHFRKTVGITPKTYREN 258 >UniRef50_B2K4J9 Transcriptional regulator, AraC family n=34 Tax=Enterobacteriaceae RepID=B2K4J9_YERPB Length = 297 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 81/135 (60%) Query: 28 NLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTAKSMLDI 87 NLE +++D+A+ SGYS+ ++Q F++ + + L YIR R L RAA+ +R++ K ++ I Sbjct: 19 NLEKRPTLDDVAKISGYSKWHLQRKFKSIVGLQLASYIRGRVLTRAAVALRISRKPIITI 78 Query: 88 ALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKTECRLINFPET 147 + L FDSQQ+F+R FKK FG +P +R ++WD+ + P F + E + + P Sbjct: 79 SDELGFDSQQTFTRTFKKRFGVTPNSFRQMNHWDVQGMIPRFGFYENYTPEIKQVTLPGK 138 Query: 148 PIFGNSFKYDIEVSN 162 + G + + D E N Sbjct: 139 ELVGFTRRLDFEEYN 153 >UniRef50_C8QFY6 Transcriptional regulator, AraC family n=3 Tax=Enterobacteriaceae RepID=C8QFY6_9ENTR Length = 142 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 47/119 (39%), Positives = 73/119 (61%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M++++I+ L WI+ NL+ +SI+++A KSGYS+ ++Q +FR LG YIR+RRL Sbjct: 1 MMQEEIIHSLTHWIDQNLDKTLSIDEVAAKSGYSKWHLQRMFRTVTKQTLGGYIRERRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFL 130 AA +R T + + DIA+ +DSQQ+FSR F++ F +P YRH P + Sbjct: 61 LAAEALRQTQRPVFDIAMQYGYDSQQTFSRVFRRQFSQTPTAYRHTMRRQAMIQRPRLV 119 >UniRef50_Q8YSB8 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YSB8_ANASP Length = 306 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 54/112 (48%) Query: 6 ELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYI 65 + ++ + L+Q + +I NL+ +++ DI+ G S F+ +Y+ Sbjct: 192 DDHHHKGLSHWKLRQAISYIHENLDQDLTLVDISTAVGMSMYYFSRQFKQSTGFAPHQYV 251 Query: 66 RKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 R+ RA L+ T K++ I + F SQ F+ F+KL G +PR YR + Sbjct: 252 MNCRIERAKKLLGSTNKTIEQICTQVGFQSQSHFTNVFRKLMGITPRVYREQ 303 >UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NS86_9BACE Length = 425 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 52/117 (44%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 E+ + I+ + +E+++ N +++ED A G S +F+ + Y+ R+ Sbjct: 304 EVKHRDIICKAIEYLKRNCRDRVTLEDTAGHVGLSPSYFSRVFKEEVGESFNSYLTALRI 363 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFP 127 R ++ T S+ +I FD Q F++ F+K G +P +R R P Sbjct: 364 SRGRAMLLDTDASIAEICDRCGFDDQSYFTKVFRKYTGVTPGRFRARRGRPENGEEP 420 >UniRef50_C6CRZ9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRZ9_PAESJ Length = 501 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 1/112 (0%) Query: 8 TENEMIRQKILQQLLEWIECNL-EHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 + +QQ +++IE + + +SI+ +A+ + + LF+ Y+ Sbjct: 390 KQQANPYVNSIQQAIDYIEEHYLDSDLSIKQVAENIHLNPSYLSTLFKKETGETFTGYVN 449 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 K +L +A +L+R T + +I ++ F+ FS FKK F SP E+R Sbjct: 450 KLKLQKAQVLLRNTDMKISEICQTVGFEDSTYFSSVFKKHFQISPSEFRQNH 501 >UniRef50_Q49JG3 LdaA n=9 Tax=Enterobacteriaceae RepID=Q49JG3_ECOLX Length = 309 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 6/220 (2%) Query: 12 MIRQKILQQLLEWIECNLE-HPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 +++ + +L++IE N+E PI I + + SGYSRR +QLLF +++ +P+G+YI++RR+ Sbjct: 2 TLKKMTINAILDYIEDNIEISPIDINSLVEYSGYSRRYLQLLFFDYIGMPVGKYIQRRRV 61 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFL 130 RAA+L+RLT ++ I+ L +DSQQ+F+REFKK G +P +YR W N Sbjct: 62 SRAAVLLRLTNLPLVTISEKLCYDSQQTFTREFKKHTGNTPLQYRKDKIWTFKNQTGHRH 121 Query: 131 IRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFV 190 + L FG + ++ + + + K + + ++ Sbjct: 122 LD-TLFPVPELRRLENKDFFGTPVCFKEKIPYTAENSQQKW--NMVKSLFSRSDEPLFVS 178 Query: 191 STFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYD 230 + K D + + E++ + E GL+ Sbjct: 179 NAISKENKLNDNFIINSIFWAKKEHSSI--EGKIDEGLFA 216 >UniRef50_C8NA30 AraC family transcriptional regulator n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NA30_9GAMM Length = 280 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 81/221 (36%), Gaps = 7/221 (3%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 + ++L+ + + H I + +A + S + L+R + + E +++ RL Sbjct: 6 YNEARFAKVLQHLHQHYPHDIDLARLADIACLSPYHWHRLYRAVLGETIYETLKRIRLHH 65 Query: 73 AAILVRLTAKSMLDIALSLHF-DSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 AA L+ + K + DIA + + + QSF+R F+ +G SP++YR R + P Sbjct: 66 AARLLLDSHKPLPDIARACGYGGNAQSFARIFRDAYGMSPQDYRARGGVPYPALPPEHTT 125 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVS 191 ++ + P+ D S + L L + + + + Sbjct: 126 ATYP---VKIRDIAALPVVALPHHGDYMSIGASFSQLETLL--TLRGHLPAPQARYFGIY 180 Query: 192 TFEPSTKSVDLLTVETFAGTVCEYADMP-KEWTTTRGLYDP 231 +P+ L A P + T G Y Sbjct: 181 YDDPAGCPTAQLRAAAAVALGGADATPPLQTLTLAAGRYAV 221 >UniRef50_UPI0001787EAC transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787EAC Length = 447 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 93/238 (39%), Gaps = 24/238 (10%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M +I+Q+ ++++E +L P+++E+IA + S N+ LF + P+ EYIRKRR+ Sbjct: 1 MQTGEIVQRAIDFVEDHLTEPLALEEIAGVAAMSLPNLYRLFHSITGHPVKEYIRKRRIS 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH--------RDYWDLA 123 AA +R T +DI F+S +F + FK+ G +P YR R + Sbjct: 61 EAASCLRNTDLPTIDIGYRCGFESYPAFMKTFKRCTGLTPGAYRKARLVYSFERMNLNER 120 Query: 124 NIFPSFLIRQQQKTECRLINFPETPIFGNSF--KYDIEVSNKSPDEEVKLR--RHHLARC 179 F ++ E R+ G F +++ + + D L H Sbjct: 121 ITFMGERDASERFPEVRITRLLPRKGIGCLFAAEHEKGIETAAIDYFRTLMSSHHIDIHE 180 Query: 180 MKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMP-----KEWTTTRGLYDPT 232 ++ F ++ + A V E A M + GLY Sbjct: 181 LRLFGWNVDL-------EDESKPFGYQLLAVDVKERARMMNHPELQAIVLDGGLYAVV 231 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 60/114 (52%) Query: 2 RYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPL 61 R E E + + L+++L+ IE + P+++ D+A G S + F+ Sbjct: 255 RMCPEAPERDTPDMERLKRVLQRIEQDYAKPLTVPDMAAVCGCSSSHFMRWFKRMTGTSP 314 Query: 62 GEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 Y+ +RRL AA +R T +L IA + F++ +F+R+FKK +G +PR YR Sbjct: 315 LAYLNERRLAAAAENLRETDDKILVIAENAGFENLSNFNRQFKKRYGVTPRAYR 368 >UniRef50_Q2C165 Putative transcriptional regulator (AraC family protein) n=1 Tax=Photobacterium sp. SKA34 RepID=Q2C165_9GAMM Length = 295 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 87/232 (37%), Gaps = 6/232 (2%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 + ++ L + I+ S+++++ S+ + Q +F++ + V YI R Sbjct: 2 KKNDIEERLSLVCYLIDSEPNEKYSLQELSDVVRLSKYHFQRVFKSMVGVSPHRYILLSR 61 Query: 70 LCRAAILVRL-TAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPS 128 L RA+ + ++DIAL F+S ++F+R F +LF +P E+R W + Sbjct: 62 LRRASFELVYFKELKIIDIALLAGFESPEAFTRAFVRLFDQTPTEFRKSPQWSSWGHRFN 121 Query: 129 FLIR-QQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLR-RHHLARCMKNFKTD 186 + +++K E ++ +P + K + K+ D V ++ Sbjct: 122 IRVPVREKKYEIKIEEYPSRECVMITHKGEYLEGMKTFDILVSWLVENNFYSETSVKSIP 181 Query: 187 IYFVSTFEPSTKSVDLLTVETFAGTVCE---YADMPKEWTTTRGLYDPTHVI 235 + P + + C+ T +RG + + Sbjct: 182 FITIPYANPLESAGSDYRCDIAISINCKVLPNDLGIFSGTISRGYFAVVTYV 233 >UniRef50_UPI0001789679 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789679 Length = 289 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 6/158 (3%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M +I++Q L IE NLE P+S+ +A S+ LF M L +YI RRL Sbjct: 1 MNHHRIIEQALIHIEENLEQPLSVSSVALTFNMSKYYFHRLFSAMMGCSLNQYILSRRLN 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 A L+ S+ DIA L F +Q SF+R FK+ +G +P R P+ + Sbjct: 61 AALSLIHNNNLSLTDIAYQLAFGTQASFTRAFKQHYGVAPSSLRAGFNKISPTPIPTVVK 120 Query: 132 RQQQKTECRLI------NFPETPIFGNSFKYDIEVSNK 163 R + ++ F ET I G +F+ D+ + Sbjct: 121 RPFKNMNGDVVTDFTLTEFKETRISGIAFEVDLATDDY 158 >UniRef50_B0MC81 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MC81_9FIRM Length = 288 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 90/229 (39%), Gaps = 10/229 (4%) Query: 12 MIRQKILQQLLEWIECNLE---HPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 M + LQ ++++IE +L+ PI +I++ + S Q +F + EY+R R Sbjct: 1 MEWNEKLQMIIDYIEHHLQRVQEPIDPGEISKIAECSFGFFQKVFSYMNGISFAEYVRSR 60 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPS 128 +L A ++ T + ++D++ +DS SF+R F++ G SP+E R + P Sbjct: 61 KLTLAGYDLKSTDQRVVDVSYLYGYDSPTSFTRAFQQFHGVSPKEAR--ISKTKLKVVPK 118 Query: 129 FLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKL----RRHHLARCMKNFK 184 + +Q+ R+ P + G S ++ + K R + + K Sbjct: 119 MQVSVKQEYTWRVEQKPAFRLIGKSIRFFCDDEEKPSKILEFWSECQRNGVFSCLISMDK 178 Query: 185 TDIYFVSTFEPSTKSV-DLLTVETFAGTVCEYADMPKEWTTTRGLYDPT 232 + + + + + + A E + E+ + Sbjct: 179 GEPPGLFGLFHNVEESRNEMQYSIMAAADGEVPEGYGEFLIPETSWAVF 227 >UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7G2_ACAM1 Length = 311 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 60/114 (52%) Query: 6 ELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYI 65 + + ++ + +L + LE+I +L+ + + D+AQ+ G SR LF+ M V +Y Sbjct: 198 KDSSDQGLPPALLNRALEYINDHLDQNLKLVDLAQEVGMSRYYFSRLFKKSMGVAPHQYA 257 Query: 66 RKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 K+R+ +A L+R T + IA F + S+ F++L G +P+ +R + Sbjct: 258 IKQRIKKAKGLLRQTNTPIAMIARQCGFTNPSHLSKYFRQLTGVTPKAFRDQYR 311 >UniRef50_B2IKR9 Transcriptional regulator, AraC family n=4 Tax=Rhizobiales RepID=B2IKR9_BEII9 Length = 292 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 57/100 (57%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + L+++L++IE L I+++D+A ++ S + LF++ + Y+ RR+ A Sbjct: 188 RRLKRVLDFIEARLATDIALDDLAAEACLSPFHFSRLFKDATGLSPHRYVTDRRVQAARD 247 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 + L S+++IAL F SQ +F R F+K G +P +YR Sbjct: 248 KLALRHSSLIEIALDTGFGSQANFIRVFRKATGLTPGQYR 287 >UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7G8V4_9FIRM Length = 310 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 60/113 (53%) Query: 3 YDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLG 62 + + + + ++L++I+ + +++++IA SG+S+ + LF+ + Sbjct: 189 FPNTRSHKQKEYLQKFNEVLDYIDSHYTEELTLDNIADFSGFSKYHFTRLFKQYTDSTFY 248 Query: 63 EYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 +Y+ RR+ A L+ S+ +IAL F S +F+R FK+ GC+P EYR Sbjct: 249 DYLIYRRIKAAEELLANPELSITEIALQSGFSSISTFNRIFKQKKGCTPSEYR 301 >UniRef50_Q13QC7 Transcriptional regulator, AraC family n=5 Tax=Burkholderia RepID=Q13QC7_BURXL Length = 307 Score = 147 bits (371), Expect = 3e-34, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 59/103 (57%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + ++++ ++I NL ++I ++A ++G S + +FR ++ + RL AA Sbjct: 205 RRIRRVTDYIRANLAGDLAISELAAQAGLSSFHFARVFRRETRETPHRFVTRLRLEEAAR 264 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 L+ T +++L IAL++ F++ FS +FK+ +G +P YR R Sbjct: 265 LLHATDQTVLQIALAVGFENASHFSVQFKRDYGVTPLAYRLRG 307 >UniRef50_A6UK12 Helix-turn-helix-domain containing protein AraC type n=3 Tax=Rhizobiaceae RepID=A6UK12_SINMW Length = 331 Score = 147 bits (371), Expect = 3e-34, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 53/100 (53%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 L++ + ++E +L P ++ +++ G S + LF+ + Y ++R+ RA +L Sbjct: 231 KLRRAVAYLEEHLAEPFNLAKLSEAVGMSEFHFSRLFKKATGLSPSRYFIRQRVARAQLL 290 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 ++ T S++ I +S+ + S F++ F++ G P YR Sbjct: 291 LQETDTSIIKIGMSVGYSSPSHFAQVFRRETGLPPSHYRR 330 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 54/107 (50%) Query: 11 EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRL 70 +M R + L++++ +I+ + PI + ++A S F++ +Y+ R+ Sbjct: 185 DMTRTERLKKVILYIQSHYHRPIRLSELADLIPMSEGQFCRFFKSMTGQTPVDYMNSYRV 244 Query: 71 CRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 +AA L+R + DIAL + F F R F+K+ C+P EYR + Sbjct: 245 RQAAELLRSPDNKISDIALDVGFGHISYFVRVFRKIMNCTPSEYRKK 291 >UniRef50_C4UL45 Putative uncharacterized protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UL45_YERRU Length = 280 Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 108/238 (45%), Gaps = 19/238 (7%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 +++ +L W+E N+ SI + ++GYSRR ++L F + PLGEY+ +RR+ RAA+L Sbjct: 5 VVRYILSWVEENIYTGASIGKLVDETGYSRRTLELWFLKYSGFPLGEYLLRRRMSRAAML 64 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQK 136 +R+T S+L+++ HF S Q+F+R F+ G +P +YR +D W + + L+ Sbjct: 65 LRMTELSILEVSTMFHFYSSQNFTRSFRIFSGVTPTKYRKQDKWSVKLLQRPLLMEDTHN 124 Query: 137 TECRLINFPETPIFGNS----FKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVST 192 + PE + G+S + + + +K + N ++ Sbjct: 125 LKAEHCVLPELKLRGSSVVCAHNFILPLVEDDLARRMKSAVSSIR---DNSGNEVCIAFR 181 Query: 193 FEP----STKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPT--------HVIWTQ 238 P S ++ VE + E + +E G Y ++++T+ Sbjct: 182 IMPSASLSASRDAVINVEMIIHDMDEKKEGTEEIVIPAGEYIQFRFSGLWSEYIVFTR 239 >UniRef50_A4SSW3 DNA gyrase inhibitor n=2 Tax=Aeromonas RepID=A4SSW3_AERS4 Length = 286 Score = 146 bits (370), Expect = 4e-34, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 73/238 (30%), Gaps = 19/238 (7%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 ++ L +L +E + +SIE + ++ S + +F GE R+ R+ R Sbjct: 3 DYRRRLIPVLRALEQ--DPDLSIEALVDRACLSLYHFHRVFTAVAGEAPGEMCRRLRMQR 60 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIR 132 AA + T S+ IAL S Q+F++ F++ +GC+P +R + + Sbjct: 61 AAWQLCYTNASVTTIALGAGLASSQAFAKAFRRHYGCTPGAFRRDKSKNGHLLSKDGHAS 120 Query: 133 QQQKT-----------ECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMK 181 + + I + V + H A Sbjct: 121 DRLLPYAEDHSSARSNTMKTIEMDARTLAYIRVTGPYGEGYDP----VCGQLHQWASARG 176 Query: 182 NFKTDIYFVSTFEPSTKSVDLLTVET-FAGTVCEYADMPKEWT-TTRGLYDPTHVIWT 237 + + F+ P + E G Y + + T Sbjct: 177 LAQGEWIFIYHDNPEVTPPAQCRTDIGVTVPAGTVGAGEVEIQLIPAGRYAQSRYLIT 234 >UniRef50_A6M0I1 Helix-turn-helix-domain containing protein, AraC type n=2 Tax=Clostridium RepID=A6M0I1_CLOB8 Length = 127 Score = 146 bits (370), Expect = 4e-34, Method: Composition-based stats. Identities = 38/107 (35%), Positives = 66/107 (61%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +++ +E+IE NL I ++++A K+ S+ + +F + + P+ EYIRK+RL Sbjct: 1 MNYEACIKKSIEYIENNLNKKIQLKELADKAFLSKYHFHRVFHSVVGEPVAEYIRKKRLE 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 AA + T ++DIAL F +Q+SF++ FKKL+G P+E+R Sbjct: 61 EAANELLTTENKIIDIALKYQFSNQESFTKAFKKLYGIPPKEFRKNK 107 >UniRef50_B7LRE5 Putative uncharacterized protein n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LRE5_ESCF3 Length = 266 Score = 146 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 6/213 (2%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + + WI N+E PI++ED+ + SGYSRR++ LF + + EY+R +RL A L+ Sbjct: 1 MINIFAWINKNIESPINVEDLVKISGYSRRHLHTLFMQYTGHSVAEYVRLKRLSYTAHLL 60 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKT 137 +LT S+LDI+L H+DS QSFSR FK+ + +P YR W F ++ Sbjct: 61 KLTNLSVLDISLRYHYDSPQSFSRVFKRYYQMTPLAYRRSQQWGKKIHF--VDPSERTDV 118 Query: 138 ECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVS-TFEPS 196 + + G+ ++ +++S++ + + + + T S ++ PS Sbjct: 119 VYDFVYYEGDTFSGSLHQFHLDMSSRLDFWQKAAMQINDMKFRSLQHTSQIRSSVSYYPS 178 Query: 197 TKSVDLLTVETFAGTVCEYADMPKEWTTTRGLY 229 S + V+ + A+ + G Y Sbjct: 179 LHSKSSMVVDY---VYDDGANSKTDIAIASGDY 208 >UniRef50_C6LLK3 Putative two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLK3_9FIRM Length = 531 Score = 146 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 55/111 (49%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 +NE + ++++ +++ N IS++D++++ S +F+ EY+ Sbjct: 420 KNEDRSESLVEKARSYMQENYSREISLDDVSKEVNVSPYYFSKIFKEESGENFTEYLTNI 479 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 R+ +A L+ S+ +I + + FSR FKK G +PREYR R Y Sbjct: 480 RIGKAKELLENPELSIKEIGVMSGYTDPNYFSRIFKKHTGITPREYRERYY 530 >UniRef50_Q18D16 AraC-family transcriptional regulator n=6 Tax=Clostridium difficile RepID=Q18D16_CLOD6 Length = 303 Score = 146 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 84/240 (35%), Gaps = 20/240 (8%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + +Q L+ IE NL ISI ++A K+ S Q LF+ ++ + EYI+ RRL Sbjct: 1 MHAWESIQITLDLIEANLSEEISINELANKANLSPFYYQRLFKRLVNKTVMEYIKLRRLA 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 RA+ + +LD+AL+ F S ++F+R FKK +G +P +YR I P ++ Sbjct: 61 RASEYLAEHKNRILDVALNFGFASHETFTRSFKKAYGLTPEKYRANPVKLNHFIKPELIL 120 Query: 132 R------------QQQKTECRLINFP-ETPIFGNSFKY---DIEVSNKSPDEEVKLRRHH 175 E G + + + V+ Sbjct: 121 NYAMVDEGVPLIADDIVIEVNRKTLSNPRTFVGIEIEVPICQLVGGETTGIAIVEELWMK 180 Query: 176 LARCMKNFKTDIYFVSTFEPSTK-SVDLLTVETFAGTVCEYADMPK---EWTTTRGLYDP 231 L N I + F + AG E + + Y Sbjct: 181 LGSQRHNIPNQIPGGNEFAALYMGNAKEGNCMYMAGVEVESGTSVEGYSTFELPVKEYLV 240 >UniRef50_B8DRY5 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DRY5_DESVM Length = 436 Score = 145 bits (367), Expect = 9e-34, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 60/108 (55%), Gaps = 1/108 (0%) Query: 14 RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRA 73 + + +++++I + +++++A + +S + +F + L +IR+ R+ RA Sbjct: 71 YEARINRVIDYIVADPARDFTLDELAGAAPFSPFHFHRIFAGLVGETLHAFIRRLRMDRA 130 Query: 74 AILVRL-TAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 A ++ A S+ D+A+ F S Q+F+R F++ F +P EYR R ++ Sbjct: 131 ANMLAFAPALSVTDVAMDCGFSSSQNFARAFRERFDMTPSEYRRRRHY 178 Score = 58.4 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 11/105 (10%), Positives = 20/105 (19%), Gaps = 7/105 (6%) Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVS 191 + + P + P + M+ + VS Sbjct: 271 TRSDVMNVEVAERPACRVAYLRHIGPYASETIGPVWGRLMAWAGQRGLMRP-GVPGFGVS 329 Query: 192 TFEPSTKSVDLLTVETFAGTVCEYADM------PKEWTTTRGLYD 230 P + + E + T GLY Sbjct: 330 WDNPEVTPPENCRYDACIAIGPEVDALELAEAGISVQTLPGGLYA 374 >UniRef50_D1PRZ9 DNA-bindng response regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PRZ9_9FIRM Length = 248 Score = 145 bits (367), Expect = 9e-34, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 70/126 (55%), Gaps = 2/126 (1%) Query: 1 MRYDKELTEN--EMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMH 58 M + K++ +N K + + ++I +++ I+IED+A + G S + LF+ Sbjct: 122 MDFTKKMRKNLRSDTNSKHINEGKDYIYAHIKERITIEDLADELGVSPSYLSRLFKKETG 181 Query: 59 VPLGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 + + YIR++++ A L+R + S++DIA L F SQ F ++F+++ G +P++YR Sbjct: 182 MSVSAYIRQQKIEIAKNLLRFSDSSLIDIANQLAFSSQSHFIQQFREVTGMTPKKYRDES 241 Query: 119 YWDLAN 124 + + Sbjct: 242 RLNPWD 247 >UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=Clostridiales RepID=C6JEP4_9FIRM Length = 531 Score = 145 bits (367), Expect = 9e-34, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 51/114 (44%) Query: 4 DKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGE 63 K E I+ + E+I N IS++D++++ S LF+ E Sbjct: 416 TKLENSKEKEAGSIIDRAKEYINENFRRDISLDDVSREVDISPYYFSKLFKQETGKNFIE 475 Query: 64 YIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 Y+ + RL A L++ + S+ +I + FSR FKK G +P E+R R Sbjct: 476 YLTEIRLKNARELLQDSRLSIKEICAQSGYSDPNYFSRIFKKYEGVTPSEFRER 529 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 1/118 (0%) Query: 2 RYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPL 61 +D E + ++ + ++ +I + + +S+ D+A + S + LF + L Sbjct: 168 NHDGEEGGGKRPYRE-IAEVARYINAHYDENLSLSDLANRFHLSPYYLSHLFPRVTGLTL 226 Query: 62 GEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 YI + R+ A L+R T + +IA + + S F R FKK SP+ YR Sbjct: 227 VAYINRVRIEEACALLRETELPVTEIAYRVGYQSGTHFGRVFKKAKAVSPQSYRREQR 284 >UniRef50_B9XAQ1 Transcriptional regulator, AraC family n=2 Tax=Verrucomicrobia RepID=B9XAQ1_9BACT Length = 326 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 52/111 (46%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 L + ++ + +IE N +++ ++A+ S +F+ + EY+ Sbjct: 213 LVQERNAEPPVIARAKRYIEDNQAEDLTLSEVAKAVNTSTFYFCKMFKKATGLHFTEYVS 272 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + R+ +A L+ + ++A + F S F+R FKK+ G SP EYR + Sbjct: 273 RVRIEKAKNLLLNPNLRVSEVAFEVGFQSLTHFNRVFKKIVGQSPTEYREQ 323 >UniRef50_A5W8X4 Transcriptional regulator, AraC family n=13 Tax=Pseudomonas RepID=A5W8X4_PSEP1 Length = 291 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 34/98 (34%), Positives = 57/98 (58%) Query: 19 QQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVR 78 +QL++++E +L+ PI++E++A + S + +FR +P +Y+ RRL RA L+R Sbjct: 190 RQLVDYLEAHLDQPITLEELALRCNLSEYHFARMFRASFGLPPHQYLLARRLHRACQLLR 249 Query: 79 LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 L + +IAL F S FS F++ G +P EYR Sbjct: 250 LGVLPLGEIALLCGFASASHFSNRFRQALGATPGEYRK 287 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 55/113 (48%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 ++ E + L+ +L+W+ + P+ + D A +S + FR + Sbjct: 173 RQCLSTETADTQRLKTVLQWLSAHYAEPLRVADAAGVCSFSASHFMRWFRQMTGQSFIAF 232 Query: 65 IRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + + RL AA +R T +++L IA F++ F+R FK FG +PR+YR + Sbjct: 233 LNEYRLNTAAEALRTTDETVLTIASRCGFENLSYFNRAFKAHFGMTPRDYRKK 285 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 58/114 (50%) Query: 6 ELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYI 65 E +++ + + + ++ +IE N I++E++A + G +R F+ + EY+ Sbjct: 171 ETAASDIKKVRRFKNVISYIEQNYRKNITLEELANECGMNRNYFCRAFKEYTGKTPVEYL 230 Query: 66 RKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 R+ A L+ T + ++DIA+ F+ F + FK + G +PR+Y R + Sbjct: 231 NYFRIESACELIASTDEKLIDIAMKCGFNDYSYFIKVFKSMKGVTPRDYCRRSF 284 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 59/117 (50%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 M ++ + ++++Q + +I N E IS++DIA+ S F+ M + Sbjct: 180 MEWENSIKNKSPKIKELIQASVNYINNNYERDISLKDIARYVFLSTSYFTRAFKEEMGIS 239 Query: 61 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 Y+ K R+ RA L++ T + DIALS+ F +QQ F+ FKK +P +YR Sbjct: 240 PINYLLKIRVERAKELLKDTDNRISDIALSVGFSNQQRFNDIFKKYVKLTPLQYRKN 296 >UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius RepID=C8WV57_ALIAD Length = 300 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 54/121 (44%) Query: 4 DKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGE 63 D E + R L+ +L +I+ +L + + D+A+ + S + F+ H + Sbjct: 179 DSPRREMDDRRADTLKAVLTYIDEHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQ 238 Query: 64 YIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLA 123 Y+ +RR+ RAA L++ +S+ I + L F F + F+ C+P YR Sbjct: 239 YVNERRVARAADLLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRKALLRKPP 298 Query: 124 N 124 Sbjct: 299 R 299 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 56/105 (53%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 ++ + ++ L++I N I I+ +A+ + S+ LF+ H+ +YI K R+ + Sbjct: 179 LKLEKIKSALDFINSNYSSDIDIDLLAKLANLSKFYFCRLFKEITHLTPVDYINKFRVEK 238 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 A L++ T S+ +IA + F++ F + FK+ G +P +Y+ Sbjct: 239 AIELIKNTNLSISEIAFEVGFNNVSYFIKVFKEYVGVTPFKYKKN 283 >UniRef50_B4B1U3 Transcriptional regulator, AraC family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B1U3_9CHRO Length = 298 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 52/103 (50%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 K L+ + ++I L IS+ ++ + S+ + F+ + +Y+ ++R+ RA Sbjct: 196 SKRLKPVFDYIHEFLSQDISLSTLSSIANMSQYHFSRTFKEMTGLTPHQYVIRQRVERAK 255 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 L+ + S+ D+A++ F Q R FK+L G +P +R + Sbjct: 256 QLLLQSKMSINDVAIACGFTHQSHLHRHFKRLIGVTPSAFREK 298 >UniRef50_A1ZSG3 Transcriptional regulator, AraC type, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZSG3_9SPHI Length = 292 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 50/227 (22%), Positives = 91/227 (40%), Gaps = 8/227 (3%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 + + L+ LL +E N P+S ++A + YS RNI +FR H +G YI++ L Sbjct: 5 LHIERLRSLLNLLENNFTKPLSSSEVAAATFYSYRNINRIFRAVFHKSIGRYIKELLLQE 64 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLA---NIFPSF 129 AA + + K++ DIA L++ Q+F++ F++ F CSP ++R ++ D+ N Sbjct: 65 AARRLAYSDKAITDIAFELNYSDLQAFNKAFRREFDCSPSQFRQQEKKDMKAWINTKLPE 124 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 I++ + + + P T I + + S D L + + + T Sbjct: 125 EIKELDRLTYSIESLPPTRILYLTHYGNYN-SQGINDCWDALLEYAYQQKLLKEDTHYLG 183 Query: 190 VSTFEPSTKSVDLLTVETFAGTVCEYADMPKEW----TTTRGLYDPT 232 + + E P + T G Y Sbjct: 184 ELMDDDEIVKDENCRYNAAITLPQEAVFEPTGFFNTKTIESGQYVCV 230 >UniRef50_P0A9E4 Regulatory protein soxS n=98 Tax=Proteobacteria RepID=SOXS_ECO57 Length = 107 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 49/106 (46%), Positives = 76/106 (71%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M QKI+Q L+ WI+ +++ P++I+ +A+KSGYS+ +Q +FR H LG+YIR+RRL Sbjct: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 AA+ +R T + + DIA+ L + SQQ+FSR F++ F +P +YRHR Sbjct: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 >UniRef50_Q05587 Regulatory protein pocR n=57 Tax=Gammaproteobacteria RepID=POCR_SALTY Length = 303 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 53/121 (43%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 + T +++ L +I+ +L + +ED+A S LF+ + + + Sbjct: 181 NKTTRGPTPHDSKMKKALRYIDAHLSDDLRLEDVASHVYLSPYYFSKLFKKYQGIGFNAW 240 Query: 65 IRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLAN 124 + ++R+ A L+ + S+ IA +L F F + F++ + +P+ YR + + Sbjct: 241 VNRQRMVSARELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQAYRQQINENSHP 300 Query: 125 I 125 Sbjct: 301 P 301 >UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQ49_9BACL Length = 344 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 2/123 (1%) Query: 5 KELTENEMI--RQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLG 62 + EM R L+ +L +I+ +L + + D+A+ + S + F+ H Sbjct: 222 EHSPRREMDDRRADTLKAVLTYIDAHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPM 281 Query: 63 EYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDL 122 +Y+ +RR+ RAA L++ +S+ I + L F F + F+ C+P YR Sbjct: 282 QYVNERRVARAADLLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRKALLKKP 341 Query: 123 ANI 125 Sbjct: 342 PRR 344 >UniRef50_B3IA10 LdaA n=1 Tax=Escherichia coli E22 RepID=B3IA10_ECOLX Length = 327 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 60/238 (25%), Positives = 111/238 (46%), Gaps = 7/238 (2%) Query: 1 MRYDKELTENEMIRQKILQQLLEWIECNLEH-PISIEDIAQKSGYSRRNIQLLFRNFMHV 59 + Y+ + M++ + + ++I+ NL+ I+I+D+ SGYSRR +QLLF+ + + Sbjct: 29 LSYNSYMLGGFMLKLMTVNAITQYIDDNLDKTSINIDDLVAYSGYSRRYLQLLFKRHIGM 88 Query: 60 PLGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 +G YI+ RR+ RAA+ +RLT S+ +I+ L +DS Q+FSREFKK G +P +YR + Sbjct: 89 AVGRYIQLRRVSRAAVFLRLTDLSLSEISERLLYDSPQTFSREFKKNTGYTPLQYRSSNV 148 Query: 120 WDLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARC 179 W N+ F +L + I+ F E + R + Sbjct: 149 WSFMNLT-GFRDTNTTFPAPKLYQLQKRDIYAEHFICCQEEIPYYGLNSLS-RIERITSA 206 Query: 180 MKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWT 237 +++ I+ + E + + + T ++ + +G+Y + T Sbjct: 207 LRDGNKKIFLSNLVEKNV--GHKINIHTMLWLEKGNSE--TKIVINKGIYASWKFVGT 260 >UniRef50_P28816 Transposon Tn10 tetD protein n=29 Tax=root RepID=TETD_ECOLX Length = 138 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 48/124 (38%), Positives = 75/124 (60%) Query: 2 RYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPL 61 + ++ +++ +L WIE NL+ + ++D+A K+GY++ Q LF+ V L Sbjct: 14 NNIQLEYDDRQFHTTVIKDVLLWIEHNLDQSLLLDDVANKAGYTKWYFQRLFKKVTGVTL 73 Query: 62 GEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWD 121 YIR RRL +AA+ +RLT K++L+IAL FDSQQSF+R FK +F +P YR W+ Sbjct: 74 ASYIRARRLTKAAVELRLTKKTILEIALKYQFDSQQSFTRRFKYIFKVTPSYYRRNKLWE 133 Query: 122 LANI 125 L + Sbjct: 134 LEAM 137 >UniRef50_B7VT37 Putative AraC-family regulatory protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VT37_VIBSL Length = 280 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 93/224 (41%), Gaps = 9/224 (4%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR-- 69 L++++ ++E +L+ P+ IE++ K +S+ + LFR + + Y ++R Sbjct: 2 QNNHVRLEKVVRYLESHLDQPLVIEELLSKFYFSKYHFHHLFRAYYGEGV--YAMRKRLL 59 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSF 129 L RAA + +SM +IA S +++Q SF++ +K F C+P RH+ Sbjct: 60 LERAARSIIYGVESMTEIAFSCGYENQASFNKAIRKQFSCTPSYIRHQKTVPALK-GQQL 118 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 + K +++ T + + ++ + +L + + +T + Sbjct: 119 TSFEDIKMNINVVDRKSTEVLYSRGSGKY--NDAAATAWGQLMPFVYSNRLIQPETIMIG 176 Query: 190 VSTFEPSTKSVDLLTVETF--AGTVCEYADMPKEWTTTRGLYDP 231 +S +P+ VD + + T E + T G Y Sbjct: 177 ISHDDPNITLVDNIRYDACATIVTEMELPEGIDRKTILGGKYAK 220 >UniRef50_Q3BUH4 Putative transcriptional regulator, AraC family n=1 Tax=Xanthomonas campestris pv. vesicatoria str. 85-10 RepID=Q3BUH4_XANC5 Length = 307 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 48/219 (21%), Positives = 76/219 (34%), Gaps = 17/219 (7%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + + + L++IE NL +S+ IA + S + Q +FR M ++ +RRL A Sbjct: 13 QSVNRALDYIEVNLAGQLSLPLIAGAACVSPFHFQRMFRAVMGETPHAFVLRRRLENALG 72 Query: 76 LVRLTAK-SMLDIALSLHFDSQQSFSREFKKLFGCSPREY--------RHRDYWDLANIF 126 + + + DIAL F S FSR F++ FGCSPR+ R R D Sbjct: 73 DISQGNRQPLTDIALGRGFSSLSDFSRNFRRHFGCSPRKLDLETCLAGRRRALDDTLAGV 132 Query: 127 PSF---LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNF 183 Q Q+ L + PE + E + + +R AR Sbjct: 133 SGLGGSAADQAQEFSVTLRDLPERTVQYLRVHRPFEEGSV---QAAAMRLVAWARDAGVE 189 Query: 184 KTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEW 222 +P S + + E Sbjct: 190 HHQWLGYLWDQPRLASAADCRYD--VAVEVTHGRHCGEI 226 >UniRef50_C7ILS3 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7ILS3_9CLOT Length = 280 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 74/205 (36%), Gaps = 10/205 (4%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + Q + ++E +L + I ++I++ + Q F +PL EY+R+R+L Sbjct: 1 MDWVDRMNQAIHYVEDHLNNKIDEKEISRITACPFSLFQGSFTQITGIPLSEYVRRRKLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWD--LANIFPSF 129 AA ++ T + ++D+AL + S +FS FK+L G +P + R + + Sbjct: 61 CAAYDLQNTEEKVIDVALKYGYQSSDAFSVAFKRLHGITPSDARKDGVKLTFYCRLDFAL 120 Query: 130 LIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYF 189 +I+ + + +I + G + K Sbjct: 121 IIKGVDRMDYTIIERTPFNVMGIRRTTPYGGG--------TWAIVKSDGSNEAIKETTGR 172 Query: 190 VSTFEPSTKSVDLLTVETFAGTVCE 214 + + + G + Sbjct: 173 FYDLGLCFSFGEDGSNDYMCGIEWD 197 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 57/108 (52%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 + + ++ +L +I N +S+++++++ S+ + LF+ + + EYI K R+ Sbjct: 180 GYKIERIKDVLNYINQNYNKNLSLDELSRQVDMSKFYLCRLFKESLRMSPVEYINKVRVD 239 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 +A L+ T S+ +IA FD+ F + FKK +P ++R ++ Sbjct: 240 KAMELLINTDMSVSEIAFECGFDNISYFIKVFKKYMHTTPLKFRKQNL 287 >UniRef50_D0Y1I0 Transcriptional regulator, AraC family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y1I0_9CAUL Length = 301 Score = 143 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 36/99 (36%), Positives = 53/99 (53%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 + LQ++L++IE N+E + IED+A + S + F+ M VP Y+ RR+ RA Sbjct: 199 RRLQRVLDFIEDNIEAALGIEDLAAIACLSPFHFARAFKVAMGVPPHRYVAGRRMSRAKS 258 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY 114 L+ A + +IA F S SF R FK+ G SP Y Sbjct: 259 LLAGGAVPVAEIAYRCGFSSVSSFGRAFKRASGVSPAAY 297 >UniRef50_A4XZN4 Transcriptional regulator, AraC family n=2 Tax=Pseudomonas RepID=A4XZN4_PSEMY Length = 277 Score = 143 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 87/224 (38%), Gaps = 9/224 (4%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + + L IE L+ + +E +A SG SR + +F + Y++ RRL AA + Sbjct: 4 VNKALWLIETELDTALDLERLASVSGLSRFTLSRVFAGATGWSVMRYVKARRLSCAAHRL 63 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI---RQQ 134 A +L++AL++ + S ++F+R F+ FG +P R + + + + Sbjct: 64 AKGAPDILEVALAVGYGSHEAFTRAFRDHFGITPETLRASGDLNGIELREALRMHATTGY 123 Query: 135 QKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFE 194 + R ++ E I G S ++++E + + + TF Sbjct: 124 ALSAPRFVDAEELLIVGLSERFNVE-----TAQGIAALWQRFGPYIGRIPGQQ-GSETFG 177 Query: 195 PSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWTQ 238 D + E AG + A T + L + ++ Sbjct: 178 VCCNPEDDGSFEYIAGVLVNRAAEVPAGLTLQRLAAHRYAVFLH 221 >UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas RepID=A4VLS2_PSEU5 Length = 377 Score = 143 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 48/100 (48%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 L++++ + L S+ +AQ S + +F+ + +Y R+ RA L Sbjct: 277 KLRKVIGVMNERLAEEFSLAALAQVVELSEYHFSRMFKRATGLSPSQYFIGLRMARARQL 336 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 + T +S++DI L + + S FS+ F++ G +P YR Sbjct: 337 LLETPRSIIDIGLEVGYSSPSHFSQVFRREVGVTPSIYRQ 376 >UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZGK8_EUBR3 Length = 285 Score = 143 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 56/110 (50%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 + + + E+I+ + I++++IA+ +G+S+ + LF+ F + +Y+ + Sbjct: 173 RHKQQEYLERFLSICEYIDTHCTEDITLDEIAKIAGFSKYHFTRLFKQFTNNTFYKYLNQ 232 Query: 68 RRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 +R+ A L+ S+ + A+ F + +F R FK GC+P E+R Sbjct: 233 KRIELALTLLADPNISVTETAMQSGFANPSTFIRVFKTEKGCTPTEFRKM 282 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 143 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 56/100 (56%) Query: 15 QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAA 74 + + +++I+ N H IS++DIA+ G SR ++ +F + +Y+ R+ A Sbjct: 172 SQYVLSAIKYIQFNYSHDISVDDIAKAVGVSRSHLYRVFMANVGQSPIDYLTNYRISEAC 231 Query: 75 ILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY 114 L++ + S+ +IA+S+ F Q FSR FKK+ G P +Y Sbjct: 232 SLLKNSNLSIAEIAVSVGFFDQFYFSRVFKKVKGVPPSKY 271 >UniRef50_A8RMQ2 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RMQ2_9CLOT Length = 502 Score = 143 bits (361), Expect = 4e-33, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 1/113 (0%) Query: 8 TENEMIRQKILQQLLEWIECNLEHP-ISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIR 66 ++ + + + + L ++E N P +S+ED A +G S F++ V +Y+ Sbjct: 384 SQKSGVYSRPVVKALAYMEENYSSPDLSMEDTAVAAGLSSARFSTSFKSETGVTFTDYLL 443 Query: 67 KRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 K R+ +A L+R + + +IA+ + + FS FKK GC P EYR + + Sbjct: 444 KLRMEKAKDLMRDPNRKIYEIAMMTGYSNIPYFSTAFKKYTGCPPSEYREKQH 496 >UniRef50_C5EKR4 AraC-family transcriptional regulator n=2 Tax=Clostridiales RepID=C5EKR4_9FIRM Length = 295 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 88/231 (38%), Gaps = 10/231 (4%) Query: 12 MIRQKILQQLLEWIECNL---EHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 M + LQ +++ +E +L E P+ E+I++ +G S Q +F + EYIR R Sbjct: 1 MEWNEKLQLIIDHVEHHLQAREEPVDREEISRIAGCSFDFFQKVFSYMNGMGFAEYIRFR 60 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPS 128 +L A ++ T ++DI+ ++S SF++ F++ G P+E R + + P Sbjct: 61 KLTLAGYDLKSTDMKIVDISYKYGYNSPTSFTKAFQQFHGIPPKEARENEVK--LRVMPK 118 Query: 129 FLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIY 188 I Q+++ ++ + G + + ++ Sbjct: 119 LQIAQRRQFSWQVQRKAGFRLIGKTIRVSCADGEHYEKIPGFWNECQKDGTYPVLRSLDT 178 Query: 189 FVSTFEPSTKS---VDLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIW 236 S D+ +E + + +P T L + T ++ Sbjct: 179 GAQKGMFGLFSLCGGDMDEIEYSIMVISD-KSLPPGLTGLE-LPEQTWAVF 227 >UniRef50_B7K731 Transcriptional regulator, AraC family n=2 Tax=Cyanobacteria RepID=B7K731_CYAP7 Length = 309 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 58/95 (61%) Query: 21 LLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLT 80 + ++I NL I + ++++ G S+ + LF+ + + +Y+ ++R+ RA +L++ + Sbjct: 209 ITDYINDNLAGEIKLSNLSELIGISQFHFSRLFKQTVGISPHQYLMRQRIERAKLLLKNS 268 Query: 81 AKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 S++++ALS F S F + F+++ G +P+EYR Sbjct: 269 PLSVVEVALSCGFSSHSHFGKYFRQITGLTPKEYR 303 Score = 46.4 bits (109), Expect = 8e-04, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Query: 7 LTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSR-RNIQLLFRNFMHVPLGEYI 65 ++ ++ + ++ +++ ++ P+S+ ++A G+S + FR + EY Sbjct: 247 ISPHQYLMRQRIERAKLLLKN---SPLSVVEVALSCGFSSHSHFGKYFRQITGLTPKEYR 303 Query: 66 RKRR 69 RR Sbjct: 304 VNRR 307 >UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFB6_9CLOT Length = 323 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 2/117 (1%) Query: 3 YDKELTENEMIR--QKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVP 60 + +++ E+ + L+++L++I + PI + ++A+ + + F+ + Sbjct: 205 FTRQVREDREESGTVENLKKVLQYIGEHYGSPIRLSELAELVNMNEQYFCRYFKKNIGKT 264 Query: 61 LGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 + EYI R+ +AA + T ++DIA + FD+ F R FKK G +P EYR + Sbjct: 265 ITEYINVIRVEKAATALAETEDKIIDIASACGFDNIGYFIRRFKKEKGMTPSEYRKK 321 >UniRef50_C6CVD2 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVD2_PAESJ Length = 536 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 34/111 (30%), Positives = 58/111 (52%) Query: 10 NEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRR 69 M I+Q++ +I +L +S E +A + + + LFR + L +YI K R Sbjct: 424 RTMTVSPIVQKVKAYIAEHLNEELSREQLASIAFVNPAYLSRLFRKETGMVLTDYILKER 483 Query: 70 LCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 + RAA L+ T +S+ +IA L + + F+R F+K+ G +P+EYR Sbjct: 484 MERAAELLATTDRSISEIADGLSYGNFSYFARLFRKVHGVTPQEYRKPYRK 534 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 55/117 (47%) Query: 2 RYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPL 61 Y++ + + + +I+Q++ +I + +S+E +A K SR + F+ Sbjct: 159 NYEENVIKEIDVDNRIIQEVATYIYEHYADNLSLEYVADKFNLSRSYLSKKFKTATGFGF 218 Query: 62 GEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRD 118 EYI R+ A L+ T KS+ DIA F+ F F+K G SP +YR + Sbjct: 219 KEYIINVRIQNACNLLLETNKSITDIAFECGFNDSNYFGDAFRKAKGISPHKYRKNE 275 >UniRef50_C9XX01 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9XX01_CROTZ Length = 306 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 52/101 (51%) Query: 17 ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 76 LQ++ + ++ NL P + +AQ G S ++ F+ + E+ +R+ RA L Sbjct: 206 KLQKVKQHLQANLAAPFHLPTLAQMCGMSSWHLSRQFKQATGMSPSEWFIHQRIQRACRL 265 Query: 77 VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 +R T+ ++DIA + + S FS+ F++ G P YR R Sbjct: 266 LRETSLPVIDIACEVGYASHSHFSQVFRRKTGMQPAAYRRR 306 >UniRef50_C0Z5D7 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z5D7_BREBN Length = 285 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 49/228 (21%), Positives = 87/228 (38%), Gaps = 13/228 (5%) Query: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 M + + L +IE L ++++++A +GYS+ + Q LF + +G+YI KRRL Sbjct: 1 MNYMEQITYALSFIEKQLTEKVTLDEVASAAGYSKYHFQRLFFHVTGETVGQYISKRRLT 60 Query: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 131 AA + L KS+ ++A + FDS ++F+R F K FG P R + + Sbjct: 61 EAAKALSLEQKSVTEVAFTYGFDSHEAFTRAFTKRFGLPPSALRRSGKMPRYMMLERMEL 120 Query: 132 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDI---- 187 + + + I P + + + SP V+ +R + Sbjct: 121 PYLENIQRQSIE----PFYVPADEALNLAGYYSPSFSVRDITGCWSRLGQQVGWQPTQKR 176 Query: 188 YFVSTFEPSTKSVDLLTVETFAGT---VCEYADMPKEWTTTRGLYDPT 232 Y + + L+ FA D + T Y Sbjct: 177 YGILRY--PDTFGLELSFTYFASLPASEQADIDSLESLTLPASSYLVF 222 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 63/122 (51%) Query: 6 ELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYI 65 E T E ++ L+++L +I+ N ++IE+++ +S+ + F+ + + EYI Sbjct: 153 EGTHGEFGAEEKLKEVLSYIQSNYRETLTIEELSSVCHFSQTHFMNFFKRYAGMTCMEYI 212 Query: 66 RKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANI 125 R+ RAA + T + ++DIA+ F + F++ FK+ FG +P YR +L+ Sbjct: 213 NHYRITRAAADLVETERQVMDIAMENGFRNISYFNKVFKERFGVTPGSYRKNSRENLSLP 272 Query: 126 FP 127 Sbjct: 273 CK 274 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 67/117 (57%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 K+ T++ + + ++QL+++I + ++I+ ++Q GYS+ + +F+ E+ Sbjct: 178 KKNTDDTYRKNEKIRQLIDYINNHYSDNLTIDFLSQFIGYSKTHFMTVFKQHTGTSCTEF 237 Query: 65 IRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWD 121 + + RL +A L+ + + +L+IA + F++ +F+R+FK+ + +P +YR + Sbjct: 238 VIQVRLSKACELLIHSTRPILEIANEIGFNNLSNFNRQFKRYYNLTPSQYRKKYTKP 294 >UniRef50_C9PI32 Arginine pathway regulatory protein ArgR repressor of arg regulon n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PI32_VIBFU Length = 299 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 62/119 (52%) Query: 4 DKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGE 63 DK+ + Q LQQ L +E NLE P+S +++A+ SRR ++ LF+ ++ Sbjct: 181 DKQRVTSGAEMQPRLQQALALMESNLEEPLSSDELAELVHISRRQLERLFKRYLDTMPAR 240 Query: 64 YIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDL 122 Y + RL +A L++ T +S++ I L F S FS +K + +PR+ R + + Sbjct: 241 YYLQLRLKKARHLLQTTNQSVVQIGLMCGFSSGPHFSSAYKAHYDMTPRDERAKRFKTF 299 >UniRef50_B2VKB8 Regulatory protein SoxS n=1 Tax=Erwinia tasmaniensis RepID=B2VKB8_ERWT9 Length = 141 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 43/104 (41%), Positives = 67/104 (64%) Query: 13 IRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCR 72 + I+ L WI+ NL +SI+++A KSGYS+ ++Q +FR LG YIR+RRL Sbjct: 1 MHDDIINTLTHWIDNNLGKNLSIDEVAAKSGYSKWHLQRMFRTVTKQTLGGYIRERRLTL 60 Query: 73 AAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 AA +R + + + DIA+ +DSQQ+FSR F++ F +P +YR+ Sbjct: 61 AAEALRQSHRPVFDIAMQYGYDSQQTFSRVFRRQFSQTPTDYRN 104 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 38/100 (38%), Positives = 57/100 (57%) Query: 16 KILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAI 75 K ++ +L +I N + I+IEDIA YS+ F+ M V +Y+ RL AA Sbjct: 194 KKIKTILSYIANNFQENIAIEDIANYCFYSKSYFMKFFKETMGVSFIQYLNDYRLEIAAE 253 Query: 76 LVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 L+ T ++LDIA + F++ F+R FKK +G SPR+YR Sbjct: 254 LLTTTTDNILDIAFATGFNNISYFNRCFKKKYGVSPRKYR 293 >UniRef50_UPI0001AF3354 AraC family transcriptional regulator n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF3354 Length = 298 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 52/98 (53%) Query: 19 QQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVR 78 + L+++IE +L P+S+ +A S + +FR +P +Y+ RR+ A L+R Sbjct: 190 RHLVDFIEMHLADPLSLGQLAGMCALSEYHFARMFRESFGLPPHQYLLARRIELARQLLR 249 Query: 79 LTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 T + +IAL+ F S FS F++ G +P EYR Sbjct: 250 HTVIPLGEIALACGFASASHFSNRFRQTVGATPGEYRQ 287 >UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG61_9FIRM Length = 533 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 53/108 (49%) Query: 9 ENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKR 68 + + ++ ++I+ + P+++E ++ G+S LF+ EY+ + Sbjct: 423 QKRQADTRPIRTAKQYIQEHYADPLTLEWVSNIVGFSGSYFSSLFKKETGQNFLEYLSEV 482 Query: 69 RLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRH 116 R+ RA L+R T S+ ++ + + + + F++ FKK G P E+R Sbjct: 483 RMNRAKELLRETNLSVAEVCVRVGYSDLKYFTKSFKKATGLKPGEFRK 530 >UniRef50_P43463 HTH-type transcriptional activator aarP n=3 Tax=Providencia RepID=AARP_PROST Length = 135 Score = 143 bits (360), Expect = 7e-33, Method: Composition-based stats. Identities = 49/108 (45%), Positives = 74/108 (68%) Query: 8 TENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRK 67 ++ + I+ ++L WIE NL + +S++DIAQ SGY++ ++Q +FR + +PLGEYIR+ Sbjct: 11 RKHTQFQSSIISEILVWIEGNLTNRLSLDDIAQHSGYTKWHLQRVFRKIVGMPLGEYIRR 70 Query: 68 RRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 RR+C AA ++ T ++DIAL FDSQQSF++ FK G SP YR Sbjct: 71 RRICEAAKELQTTNLQVIDIALKYQFDSQQSFAKRFKAYLGISPSLYR 118 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 143 bits (360), Expect = 7e-33, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 2/115 (1%) Query: 2 RYDKELTENEMIRQKI--LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHV 59 RY + + I L+ +L +IE + I++ ++A+ +G S + F Sbjct: 165 RYTASDKSDLSTHRNIYLLKNVLNYIEAHYTEKITLHELARTAGMSSKYFCHFFSEMTGR 224 Query: 60 PLGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREY 114 +Y+ R+ RA L+ S+ DIA+ F+ F+R FKK G SP +Y Sbjct: 225 TPIDYVNYYRVERACCLLAGIGHSITDIAMLCGFNDVSYFTRAFKKYKGISPGQY 279 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 143 bits (360), Expect = 7e-33, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 57/118 (48%) Query: 5 KELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEY 64 + + + + +I + P+S+E++A +G+S+ + LF+ + +Y Sbjct: 170 EAKNNKQQEYMEKFLFICNYINEHYAEPLSLEEVASLAGFSKYHFTRLFKQYADTTFYKY 229 Query: 65 IRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDL 122 + ++R+ A L+ S+LDI+L F + SF R F+KL G +P E R D Sbjct: 230 LNQKRIAHAKHLLVDKNLSVLDISLQCGFSNLSSFLRMFRKLTGFTPTELRKMYDGDF 287 >UniRef50_B0T953 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31 RepID=B0T953_CAUSK Length = 316 Score = 142 bits (359), Expect = 8e-33, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 61/116 (52%) Query: 4 DKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGE 63 + + + L+Q++++++ +L IS D+ +S ++ F+ M V Sbjct: 200 SQRPAGRGGLTPRHLKQVIDYMDAHLGEAISPRDLGDLVHFSPSHLGRAFKVSMGVSPYA 259 Query: 64 YIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDY 119 ++ +RR+ RAA L+ +S+ ++AL++ F Q F+R F ++FG SP +R + Sbjct: 260 WLIERRVRRAAELLLDPQRSIAEVALAVGFSDQPHFTRAFARVFGASPGAWRRQSL 315 >UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clostridium RepID=A0Q2M6_CLONN Length = 246 Score = 142 bits (359), Expect = 8e-33, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 62/117 (52%) Query: 4 DKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGE 63 K + E+ + Q+++E+I+ N ++ I+++D+A +S + LF+ M + Sbjct: 130 KKRIEESNKNCTEEFQEVVEYIDKNFKNDITLKDVADHVNFSSSYLSKLFKKEMGINFNR 189 Query: 64 YIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYW 120 YI K R+ +A ++ + S+ +IA S+ ++ F + FKK+ +P EYR + Sbjct: 190 YITKIRIDKAKEILINSNISINEIAFSVGYNEPNYFCKVFKKIVNMTPSEYRTNSRF 246 >UniRef50_A9KM10 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KM10_CLOPH Length = 136 Score = 142 bits (359), Expect = 9e-33, Method: Composition-based stats. Identities = 37/98 (37%), Positives = 67/98 (68%) Query: 18 LQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILV 77 + ++ ++IE N + I+++DIA+ GYS+ ++ +F + + +YI +RRL AA L+ Sbjct: 5 ISKVKKYIEENFKDDITLDDIAKNVGYSKYHLNRMFLENTGLTIHKYICERRLTEAADLL 64 Query: 78 RLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYR 115 T +S++DIALS+ + SQQ+F+ FK++F C+P +YR Sbjct: 65 LYTDQSIVDIALSIGYTSQQAFTLAFKQMFDCTPYKYR 102 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.152 0.446 Lambda K H 0.267 0.0463 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,622,999,704 Number of Sequences: 3077464 Number of extensions: 92496554 Number of successful extensions: 356163 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 18899 Number of HSP's successfully gapped in prelim test: 1732 Number of HSP's that attempted gapping in prelim test: 304078 Number of HSP's gapped (non-prelim): 26699 length of query: 239 length of database: 1,040,396,356 effective HSP length: 125 effective length of query: 114 effective length of database: 655,713,356 effective search space: 74751322584 effective search space used: 74751322584 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.7 bits) S2: 91 (39.5 bits)