4 c3rfaA_ Probab=99.56   E-value=1.1e-13  Score=100.82  Aligned_columns=177  Identities=17%

Q ss_pred             CCCCCEEEEEECC-CCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECC-C
Q ss_conf             3488439999837-8888788788955614587874789999874543101330118999988886045630686158-6
Q batch____        17 YFTGVPAIFIRLQ-GCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITG-G   94 (223)
Q Consensus        17 ~~~G~~~~fi~~~-gCNl~C~yC~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g-g   94 (223)
                      ++.++.+++|..| |||++|.||   ++......+.++..++.+.+....       .............+.++++.| |
T Consensus        94 ~~~~r~t~cissqvGC~~~C~FC---~t~~~g~~R~ls~~EIv~qv~~~~-------~~~~~~~~~~~~~i~~vv~~g~G  163 (333)
T c3rfaA_          94 PEDDRATLCVSSQVGCALECKFC---STAQQGFNRNLRVSEIIGQVWRAA-------KIVGAAKVTGQRPITNVVMMGMG  163 (333)
T ss_dssp             ECSSCEEEECCCEEECSSCCTTC---GGGTTCEEEECCHHHHHHHHHHHH-------HHHCCHHHHSSCSCSEEEECSSS
T ss_pred             EECCCEEEEEECCCCCCCCCEEE---ECCCCCCCCCCCHHHHHHHHHHHH-------HHHHHHHHCCCCCCCEEEEECCC
T ss_conf             63890389972675753667034---112448501358899999999999-------86414332035542125750586


Q ss_pred             CCCHHH--HHHHHHHH-HCCCC-----EEEEEECCCCC----CCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEEEC
Q ss_conf             420578--99999742-10695-----79998078753----20026629999447788002457651254550688740
Q batch____        95 EPCIHD--LLPLTDLL-EKNGF-----SCQIETSGTHE----VRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPV  162 (223)
Q Consensus        95 ep~~~~--~~~~~~~~-~~~g~-----~v~l~TNG~l~----~~~~~~~~i~vsik~~~~~~~~~~~~~~~~~~~~k~~~  162 (223)
                      ||++..  +.++++.+ +..|+     .+.+.|+|...    ......+.+.+|+++++++.++.+...           
T Consensus       164 EPl~n~~~v~~~l~~l~~~~gl~i~~~~itvst~g~~~~i~~L~~~~~~~l~isl~a~~~e~r~~l~p~-----------  232 (333)
T c3rfaA_         164 EPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPI-----------  232 (333)
T ss_dssp             CGGGCHHHHHHHHHHHHSTTTTCCCGGGEEEEESCCHHHHHHHHHHCCCEEEEECCCSSHHHHHHHSGG-----------
T ss_pred             CCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHEEC-----------
T ss_conf             322498999999998521155243011210157554178999873158489980677987786231406-----------


Q ss_pred             CCCCCHHHHHHHHHHCC--------CCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf             77222899999997217--------77541899869888888999999999985987989
Q batch____       163 GRVRDIEALDELLATLT--------DDKPRVIALQPISQKDDATRLCIETCIARNWRLSM  214 (223)
Q Consensus       163 ~~~~~~~~i~~~~~~~~--------~~~~~~v~i~~~~~n~e~~~~~~~~~~~~~~~~~~  214 (223)
                      +....++++.+.+..+.        .+...++++.++++++++++++++++...++++.+
T Consensus       233 ~k~~~l~~i~~~~~~~~~~~~~~g~~v~i~y~li~g~nDs~e~a~~l~~~l~~~~~~Vnl  292 (333)
T c3rfaA_         233 NKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINL  292 (333)
T ss_dssp             GGTSCHHHHHHHHHHHHHHCTTTTTCEEEEEEEBTTTTCSHHHHHHHHHHTTTSCEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE
T ss_conf             788899999999999999776439808998554089998989999999998508987999