97 c3civA_ Probab=21.26   E-value=57  Score=13.53  Aligned_columns=154  Identities=12%

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHH----HCCHHHHHHHHHHHHHCCCC--EEC
Q ss_conf             322345799888998999998999998648887600012102568746676----63989999999889850930--110
Q batch____        58 GIQATGNYPGKARNASELRADLEQAMRLIPGPKRLNLHAIYLESDTPVSRD----QIKPEHFKNWVEWAKANQLG--LDF  131 (419)
Q Consensus        58 gi~~tgn~PG~pRn~~E~~~D~~~~~~l~~~~~~v~lH~~y~~~~~~Ip~D----~v~pe~f~~~~~~A~~~glg--ld~  131 (419)
                      |+....+.+...=+-.+..+|+.++.++==-+=|+.++....+...+-...    ....+.....++.|+++||+  ||+
T Consensus        11 G~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~A~~~Gl~Vil~~   90 (316)
T c3civA_          11 GMTFGFVGQHGTWGTDEARASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKP   90 (316)
T ss_dssp             EEEESTTCBTTGGGSHHHHHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEC
T ss_conf             63414414778888368999999999839989998232477776776544476776797899999999986898799972


Q ss_pred             CCCCCCCHHHH--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHH-HHHHHHH
Q ss_conf             70010481442--03643588988999999989999999999856418752132440488889880122169-9999999
Q batch____       132 NPSCFSHPLSA--DGFTLSHADDSIRQFWIDHCKASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPR-QRLLAAL  208 (419)
Q Consensus       132 Npn~Fs~p~s~--~g~SLshpD~~iR~~~i~H~l~c~~I~~~~G~~lG~~~i~niWi~DGsn~~~~d~l~~R-~Rl~esL  208 (419)
                      ++...|++-..  +..+-.-+....+..|.+.-.+.+.--.-++..+     .|-++..|+.-+.......- .++...+
T Consensus        91 h~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-----~nE~~~~gne~~~~~~~~~~~~~~~~~i  165 (316)
T c3civA_          91 TVNCRDGTWRGEIRFEKEHGPDLESWEAWFGSYSDMMAHYAHVAKRT-----GCEMFCVGCEMTTAEPHEAMWRETIARV  165 (316)
T ss_dssp             EEEETTCCCGGGCCCSBSCCTTSSBHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEEESCTTTTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf             35888876555667678601255769999999999998799998741-----9985850677776001467899999999


Q ss_pred             HHHHHHCC
Q ss_conf             99987313
Q batch____       209 DEVISEKL  216 (419)
Q Consensus       209 ~eiya~~~  216 (419)
                      ++++..-+
T Consensus       166 r~~dp~~~  173 (316)
T c3civA_         166 RTEYDGLV  173 (316)
T ss_dssp             HHHCCSEE
T ss_pred             HHHCCCCE
T ss_conf             97469977