Phyre 2 alignment of Q06067 with c2veaA_

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Job Description | Q06067
Confidence | 42.69% | Date | Thu Jan 5 12:33:25 GMT 2012
Rank | 143 | Aligned Residues | 40
% Identity | 18% | Template | c2veaA_
PDB info | PDB header:transferase | Chain: A: PDB Molecule:phytochrome-like protein cph1; | PDBTitle: the complete sensory module of the cyanobacterial2 phytochrome cph1 in the pr-state.
Resolution | 2.21 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 275 | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | I | A | I | D | R | Q | G | D | V | T | T | M | N | P | A | A | E | V | I | T | G | Y | Q | R | H | E | L | V | G | Q | P | Y | S | M | L | F | D | N | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | V | L | Q | E | P | D | L | T | I | S | Q | I | S | A | N | C | T | G | I | L | G | R | S | P | E | D | L | L | G | R | T | L | G | E | V | F | D | S | F
Template Known Secondary structure |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  | T | T |  |  |  |  | T | S |  |  | T | T | T | S | S | T | T | T | T | T | T | T | S | B |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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