18/01/2012 17:14:38 : INFO  : Run start: Wed Jan 18 17:14:35 GMT 2012
18/01/2012 17:14:48 : INFO  : Initialised job
18/01/2012 17:14:51 : INFO  : Renaming log file 'phyre2_20120118_171434.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/e440350e65995fb1/phyre_20120118_171434.log'
18/01/2012 17:14:54 : INFO  : Initialised job:
Sequence
>batch____
MSWQQFKHAWLIKFWAPIPAVIAAGILSTYYFGITGTFWAVTGEFTRWGGQLLQLFGVHA
EEWGYFKIIHLEGSPLTRIDGMMILGMFGGCFAAALWANNVKLRMPRSRIRIMQAIIGGI
IAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAIATAIGSWFGARFTLLPIFRIPVKMQKV
SAASPLTQKPDQARRRFRLGMLVFFGMLGWALLTAMNQPKLGLAMLFGVGFGLLIERAQI
CFTSAFRDMWITGRTHMAKAIIIGMAVSAIGIFSYVQLGVEPKIMWAGPNAVIGGLLFGF
GIVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGSTILAYYWDDFAPALATDWDKINLLKT
FGPMGGLLVTYLLLFAALMLIIGWEKRFFRRAAPQTAKEIA

18/01/2012 17:14:57 : INFO  : Checked sequence
18/01/2012 17:15:04 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 17:15:06 : INFO  : PSI-BLAST 3 iterations
18/01/2012 17:17:38 : INFO  : PSI-BLAST 5 iterations
18/01/2012 17:21:00 : INFO  : Finished PSI-BLAST
18/01/2012 17:21:04 : INFO  : Running Buildali to generate a3m file
18/01/2012 17:33:02 : INFO  : Converting to HMM
18/01/2012 17:33:05 : INFO  : Calibrating HMM
18/01/2012 17:33:27 : INFO  : Searching HMM database
18/01/2012 17:41:38 : INFO  : Finished buildali
18/01/2012 17:41:42 : INFO  : Predicting secondary structure
18/01/2012 17:41:59 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 17:42:02 : INFO  : Predicting Disordered regions
18/01/2012 17:42:09 : INFO  : Predicted Disorder (Disopred)
18/01/2012 17:42:12 : INFO  : Running memsat_svm check
18/01/2012 17:42:29 : INFO  : Globular protein
18/01/2012 17:42:30 : INFO  : Predicted Transmembrane (memsat_svm) ID 'e440350e65995fb1'
18/01/2012 17:42:35 : INFO  : Initialising fold library search
18/01/2012 17:42:41 : INFO  : Initialised search input
18/01/2012 17:42:47 : INFO  : Building Ensemble models
18/01/2012 17:42:55 : INFO  : Building hh.d1jb0l_.model.1.pdb
18/01/2012 17:43:25 : INFO  : Building d1jb0l_.1.pdb
18/01/2012 17:43:50 : INFO  : Building c2wvmA_.2.pdb
18/01/2012 17:44:16 : INFO  : Building c2zu8A_.3.pdb
18/01/2012 17:44:43 : INFO  : Building c3hfxA_.4.pdb
18/01/2012 17:45:10 : INFO  : Building c2y69Q_.5.pdb
18/01/2012 17:45:36 : INFO  : Building d2vv5a3.6.pdb
18/01/2012 17:46:03 : INFO  : Building c2b5kA_.7.pdb
18/01/2012 17:46:30 : INFO  : Building d1v54d_.8.pdb
18/01/2012 17:46:57 : INFO  : Building c3pm7A_.9.pdb
18/01/2012 17:47:25 : INFO  : Building c2w2eA_.10.pdb
18/01/2012 17:47:51 : INFO  : Building c3obhA_.11.pdb
18/01/2012 17:48:18 : INFO  : Building c2xecD_.12.pdb
18/01/2012 17:48:44 : INFO  : Building c3p5nA_.13.pdb
18/01/2012 17:49:11 : INFO  : Building c2gv5C_.14.pdb
18/01/2012 17:49:37 : INFO  : Building d1ylea1.15.pdb
18/01/2012 17:50:03 : INFO  : Building c2djcA_.16.pdb
18/01/2012 17:50:32 : INFO  : Building c2dj9A_.17.pdb
18/01/2012 17:51:01 : INFO  : Building c1hrlA_.18.pdb
18/01/2012 17:51:30 : INFO  : Building c3k07A_.19.pdb
18/01/2012 17:51:59 : INFO  : Building d1pv7a_.20.pdb
18/01/2012 17:52:59 : INFO  : Finished HH model building
18/01/2012 17:53:02 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 17:55:01 : INFO  : html domain output complete ID 'e440350e65995fb1'
18/01/2012 18:06:48 : INFO  : Run end  : Wed Jan 18 18:06:46 GMT 2012
