17/01/2012 14:55:18 : INFO  : Run start: Tue Jan 17 14:55:17 GMT 2012
17/01/2012 14:55:22 : INFO  : Initialised job
17/01/2012 14:55:24 : INFO  : Renaming log file 'phyre2_20120117_145516.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/e43c6b1d80074314/phyre_20120117_145516.log'
17/01/2012 14:55:25 : INFO  : Initialised job:
Sequence
>batch____
MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSNQLREQQGELTSTWDLM
LQTRINLSRSAVRMMMDSSNQQSNAKVELLDSARKTLAQAATHYKKFKSMAPLPEMVATS
RNIDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNAMGEAFAQYALSSEKLYRDIV
TDNADDYRFAQWQLAVIALVVVLILLVAWYGIRRMLLTPLAKIIAHIREIAGGNLANTLT
IDGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQASAL
EETAASMEQLTATVKQNADNARQASQLAQSASDTAQHGGKVVDGVVKTMHEIADSSKKIA
DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKALIE
DSVSRVDTGSVLVESAGETMNNIVNAVTRVTDIMGEIASASDEQSRGIDQVALAVSEMDR
VTQQNASLVQESAAAAAALEEQASRLTQAVSAFRLAASPLTNKPQTPSRPASEQPPAQPR
LRIAEQDPNWETF

17/01/2012 14:55:26 : INFO  : Checked sequence
17/01/2012 14:55:29 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 14:55:30 : INFO  : PSI-BLAST 3 iterations
17/01/2012 14:58:56 : INFO  : PSI-BLAST 5 iterations
17/01/2012 15:03:58 : INFO  : Finished PSI-BLAST
17/01/2012 15:03:59 : INFO  : Running Buildali to generate a3m file
17/01/2012 18:04:30 : INFO  : Converting to HMM
17/01/2012 18:05:12 : INFO  : Calibrating HMM
17/01/2012 18:05:36 : INFO  : Searching HMM database
17/01/2012 18:18:51 : INFO  : Finished buildali
17/01/2012 18:18:53 : INFO  : Predicting secondary structure
17/01/2012 18:19:00 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 18:19:01 : INFO  : Predicting Disordered regions
17/01/2012 18:19:05 : INFO  : Predicted Disorder (Disopred)
17/01/2012 18:19:07 : INFO  : Running memsat_svm check
17/01/2012 18:24:22 : INFO  : Running memsat_svm full
17/01/2012 18:28:31 : INFO  : Predicted Transmembrane (memsat_svm) ID 'e43c6b1d80074314'
17/01/2012 18:28:33 : INFO  : Initialising fold library search
17/01/2012 18:28:37 : INFO  : Initialised search input
17/01/2012 18:28:41 : INFO  : Building Ensemble models
17/01/2012 18:28:45 : INFO  : Building hh.c1qu7A_.model.1.pdb
17/01/2012 18:29:02 : INFO  : Building hh.c2ch7A_.model.2.pdb
17/01/2012 18:29:17 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/e43c6b1d80074314/hh.c2ch7A_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/e43c6b1d80074314/c2ch7A_.2.pdb
17/01/2012 18:29:22 : INFO  : Building hh.c2d4uA_.model.3.pdb
17/01/2012 18:29:35 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/e43c6b1d80074314/hh.c2d4uA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/e43c6b1d80074314/c2d4uA_.4.pdb
17/01/2012 18:29:40 : INFO  : Building hh.c3lnrA_.model.4.pdb
17/01/2012 18:29:55 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/e43c6b1d80074314/hh.c3lnrA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/e43c6b1d80074314/c3lnrA_.5.pdb
17/01/2012 18:30:01 : INFO  : Building hh.d2asra_.model.5.pdb
17/01/2012 18:30:16 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/e43c6b1d80074314/hh.d2asra_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/e43c6b1d80074314/d2asra_.6.pdb
17/01/2012 18:30:21 : INFO  : Building hh.d2asxa1.model.6.pdb
17/01/2012 18:30:35 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/e43c6b1d80074314/hh.d2asxa1.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/e43c6b1d80074314/d2asxa1.9.pdb
17/01/2012 18:30:40 : INFO  : Building c1qu7A_.1.pdb
17/01/2012 18:30:57 : INFO  : Building c2ch7A_.2.pdb
17/01/2012 18:31:15 : INFO  : Building c3g67A_.3.pdb
17/01/2012 18:31:32 : INFO  : Building c2d4uA_.4.pdb
17/01/2012 18:31:49 : INFO  : Building c3lnrA_.5.pdb
17/01/2012 18:32:05 : INFO  : Building d2asra_.6.pdb
17/01/2012 18:32:22 : INFO  : Building d2liga_.7.pdb
17/01/2012 18:32:38 : INFO  : Building d1vlta_.8.pdb
17/01/2012 18:32:54 : INFO  : Building d2asxa1.9.pdb
17/01/2012 18:33:11 : INFO  : Building c2rm8A_.10.pdb
17/01/2012 18:33:28 : INFO  : Building c1sj8A_.11.pdb
17/01/2012 18:33:45 : INFO  : Building c3zrwB_.12.pdb
17/01/2012 18:34:02 : INFO  : Building c2wpqA_.13.pdb
17/01/2012 18:34:19 : INFO  : Building c3ojaB_.14.pdb
17/01/2012 18:34:35 : INFO  : Building c3dyjA_.15.pdb
17/01/2012 18:34:52 : INFO  : Building c2kbbA_.16.pdb
17/01/2012 18:35:09 : INFO  : Building c1deqO_.17.pdb
17/01/2012 18:35:24 : INFO  : Building c2qihA_.18.pdb
17/01/2012 18:35:40 : INFO  : Building c3hd7A_.19.pdb
17/01/2012 18:35:57 : INFO  : Building c1ei3E_.20.pdb
17/01/2012 18:37:58 : INFO  : Finished HH model building
17/01/2012 18:38:00 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 18:39:11 : INFO  : html domain output complete ID 'e43c6b1d80074314'
17/01/2012 18:54:03 : INFO  : Run end  : Tue Jan 17 18:54:02 GMT 2012
