Phyre 2 Results for P07017

Email | l.a.kelley@imperial.ac.uk
Description | P07017
Date | Thu Jan 5 11:00:02 GMT 2012
Unique Job ID | e43c6b1d80074314

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c1qu7A_ |
|  | 99.9 | 84 | PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein i; PDBTitle: four helical-bundle structure of the cytoplasmic domain of a serine2 chemotaxis receptor
2 | c2ch7A_ |
|  | 99.7 | 21 | PDB header:chemotaxis Chain: A: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: crystal structure of the cytoplasmic domain of a bacterial2 chemoreceptor from thermotoga maritima
3 | c3g67A_ |
|  | 99.5 | 21 | PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: crystal structure of a soluble chemoreceptor from thermotoga2 maritima
4 | c2d4uA_ |
|  | 98.3 | 34 | PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein i; PDBTitle: crystal structure of the ligand binding domain of the bacterial serine2 chemoreceptor tsr
5 | c3lnrA_ |
|  | 98.1 | 12 | PDB header:signaling protein Chain: A: PDB Molecule:aerotaxis transducer aer2; PDBTitle: crystal structure of poly-hamp domains from the p. aeruginosa soluble2 receptor aer2
6 | d2asra_ |
|  | 98.0 | 99 | Fold:Four-helical up-and-down bundle Superfamily:Aspartate receptor, ligand-binding domain Family:Aspartate receptor, ligand-binding domain
7 | d2liga_ |
|  | 98.0 | 69 | Fold:Four-helical up-and-down bundle Superfamily:Aspartate receptor, ligand-binding domain Family:Aspartate receptor, ligand-binding domain
8 | d1vlta_ |
|  | 97.5 | 70 | Fold:Four-helical up-and-down bundle Superfamily:Aspartate receptor, ligand-binding domain Family:Aspartate receptor, ligand-binding domain
9 | d2asxa1 |
|  | 97.0 | 27 | Fold:HAMP domain-like Superfamily:HAMP domain-like Family:HAMP domain
10 | c2rm8A_ |
|  | 96.7 | 19 | PDB header:signaling protein Chain: A: PDB Molecule:sensory rhodopsin ii transducer; PDBTitle: the solution structure of phototactic transducer protein2 htrii linker region from natronomonas pharaonis
11 | c1sj8A_ |
|  | 94.9 | 9 | PDB header:structural protein Chain: A: PDB Molecule:talin 1; PDBTitle: crystal structure of talin residues 482-789
12 | c3zrwB_ |
|  | 94.3 | 19 | PDB header:signaling protein Chain: B: PDB Molecule:af1503 protein, osmolarity sensor protein envz; PDBTitle: the structure of the dimeric hamp-dhp fusion a291v mutant
13 | c2wpqA_ |
|  | 93.0 | 12 | PDB header:membrane protein Chain: A: PDB Molecule:trimeric autotransporter adhesin fragment; PDBTitle: salmonella enterica sada 479-519 fused to gcn4 adaptors (2 sadak3, in-register fusion)
14 | c3ojaB_ |
|  | 80.6 | 12 | PDB header:protein binding Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein PDBTitle: crystal structure of lrim1/apl1c complex
15 | c3dyjA_ |
|  | 72.5 | 9 | PDB header:structural protein Chain: A: PDB Molecule:talin-1; PDBTitle: crystal structure a talin rod fragment
16 | c2kbbA_ |
|  | 64.8 | 12 | PDB header:structural protein Chain: A: PDB Molecule:talin-1; PDBTitle: nmr structure of the talin rod domain, 1655-1822
17 | c1deqO_ |
|  | 61.7 | 16 | PDB header: PDB COMPND:
18 | c2qihA_ |
|  | 56.6 | 12 | PDB header:cell adhesion Chain: A: PDB Molecule:protein uspa1; PDBTitle: crystal structure of 527-665 fragment of uspa1 protein from2 moraxella catarrhalis
19 | c3hd7A_ |
|  | 53.6 | 26 | PDB header:exocytosis Chain: A: PDB Molecule:vesicle-associated membrane protein 2; PDBTitle: helical extension of the neuronal snare complex into the membrane,2 spacegroup c 1 2 1
20 | c1ei3E_ |
|  | 52.3 | 16 | PDB header: PDB COMPND:
21 | c1urqA_ |
| not modelled | 52.1 | 21 | PDB header:transport protein Chain: A: PDB Molecule:m-tomosyn isoform; PDBTitle: crystal structure of neuronal q-snares in complex with2 r-snare motif of tomosyn
22 | c3b5nF_ |
| not modelled | 48.2 | 12 | PDB header:membrane protein Chain: F: PDB Molecule:protein sso1; PDBTitle: structure of the yeast plasma membrane snare complex
23 | c3ipdB_ |
| not modelled | 46.6 | 13 | PDB header:exocytosis Chain: B: PDB Molecule:syntaxin-1a; PDBTitle: helical extension of the neuronal snare complex into the2 membrane, spacegroup i 21 21 21
24 | c1sfcJ_ |
| not modelled | 44.8 | 13 | PDB header:transport protein Chain: J: PDB Molecule:protein (syntaxin 1a); PDBTitle: neuronal synaptic fusion complex
25 | c1n7sB_ |
| not modelled | 42.6 | 15 | PDB header:transport protein Chain: B: PDB Molecule:syntaxin 1a; PDBTitle: high resolution structure of a truncated neuronal snare2 complex
26 | c1ei3C_ |
| not modelled | 41.6 | 6 | PDB header: PDB COMPND:
27 | c1deqF_ |
| not modelled | 40.2 | 5 | PDB header: PDB COMPND:
28 | c2ieqC_ |
| not modelled | 37.7 | 14 | PDB header:viral protein Chain: C: PDB Molecule:spike glycoprotein; PDBTitle: core structure of s2 from the human coronavirus nl63 spike2 glycoprotein
29 | c1n7sA_ |
| not modelled | 37.1 | 25 | PDB header:transport protein Chain: A: PDB Molecule:vesicle-associated membrane protein 2; PDBTitle: high resolution structure of a truncated neuronal snare2 complex
30 | c3ghgK_ |
| not modelled | 36.9 | 15 | PDB header:blood clotting Chain: K: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of human fibrinogen
31 | c2npsA_ |
| not modelled | 35.4 | 25 | PDB header:transport protein Chain: A: PDB Molecule:vesicle-associated membrane protein 4; PDBTitle: crystal structure of the early endosomal snare complex
32 | c2vs0B_ |
| not modelled | 33.5 | 13 | PDB header:cell invasion Chain: B: PDB Molecule:virulence factor esxa; PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
33 | c2kseA_ |
| not modelled | 33.5 | 13 | PDB header:transferase Chain: A: PDB Molecule:sensor protein qsec; PDBTitle: backbone structure of the membrane domain of e. coli2 histidine kinase receptor qsec, center for structures of3 membrane proteins (csmp) target 4311c
34 | c2npsB_ |
| not modelled | 33.5 | 16 | PDB header:transport protein Chain: B: PDB Molecule:syntaxin 13; PDBTitle: crystal structure of the early endosomal snare complex
35 | c3b5nE_ |
| not modelled | 32.5 | 15 | PDB header:membrane protein Chain: E: PDB Molecule:synaptobrevin homolog 1; PDBTitle: structure of the yeast plasma membrane snare complex
36 | c1sfcI_ |
| not modelled | 30.4 | 26 | PDB header:transport protein Chain: I: PDB Molecule:protein (synaptobrevin 2); PDBTitle: neuronal synaptic fusion complex
37 | c2efrB_ |
| not modelled | 27.5 | 13 | PDB header:contractile protein Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain; PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution
38 | c1i49A_ |
| not modelled | 25.0 | 13 | PDB header:signaling protein Chain: A: PDB Molecule:arfaptin 2; PDBTitle: crystal structure analysis of arfaptin
39 | c1gl2A_ |
| not modelled | 22.4 | 13 | PDB header:membrane protein Chain: A: PDB Molecule:endobrevin; PDBTitle: crystal structure of an endosomal snare core complex
40 | c1m1jA_ |
| not modelled | 21.4 | 6 | PDB header:blood clotting Chain: A: PDB Molecule:fibrinogen alpha subunit; PDBTitle: crystal structure of native chicken fibrinogen with two different2 bound ligands
41 | c3gvmA_ |
| not modelled | 18.4 | 11 | PDB header:viral protein Chain: A: PDB Molecule:putative uncharacterized protein sag1039; PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
42 | c2bezC_ |
| not modelled | 17.3 | 16 | PDB header:viral protein Chain: C: PDB Molecule:e2 glycoprotein; PDBTitle: structure of a proteolitically resistant core from the2 severe acute respiratory syndrome coronavirus s2 fusion3 protein
43 | c1l4aD_ |
| not modelled | 17.1 | 7 | PDB header:endocytosis/exocytosis Chain: D: PDB Molecule:s-snap25 fusion protein; PDBTitle: x-ray structure of the neuronal complexin/snare complex2 from the squid loligo pealei
44 | c3arcl_ |
| not modelled | 16.8 | 35 | PDB header:electron transport, photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution
45 | c2npsD_ |
| not modelled | 16.2 | 5 | PDB header:transport protein Chain: D: PDB Molecule:syntaxin-6; PDBTitle: crystal structure of the early endosomal snare complex
46 | c1sfcD_ |
| not modelled | 15.7 | 10 | PDB header:transport protein Chain: D: PDB Molecule:protein (snap-25b); PDBTitle: neuronal synaptic fusion complex
47 | c3cwgA_ |
| not modelled | 15.4 | 9 | PDB header:transcription Chain: A: PDB Molecule:signal transducer and activator of transcription PDBTitle: unphosphorylated mouse stat3 core fragment
48 | c1nafA_ |
| not modelled | 15.4 | 15 | PDB header:signaling protein, membrane protein Chain: A: PDB Molecule:adp-ribosylation factor binding protein gga1; PDBTitle: crystal structure of the human gga1 gat domain
49 | c1kmiZ_ |
| not modelled | 15.3 | 7 | PDB header:signaling protein Chain: Z: PDB Molecule:chemotaxis protein chez; PDBTitle: crystal structure of an e.coli chemotaxis protein, chez
50 | d1ez3a_ |
| not modelled | 14.8 | 12 | Fold:STAT-like Superfamily:t-snare proteins Family:t-snare proteins
51 | c2d3eD_ |
| not modelled | 14.5 | 8 | PDB header:contractile protein Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1 PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin
52 | c2d4yA_ |
| not modelled | 14.1 | 9 | PDB header:structural protein Chain: A: PDB Molecule:flagellar hook-associated protein 1; PDBTitle: crystal structure of a 49k fragment of hap1 (flgk)
53 | c3prrL_ |
| not modelled | 13.7 | 35 | PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 2 of 2). this file contains second monomer of psii3 dimer
54 | c3kziL_ |
| not modelled | 13.7 | 35 | PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of monomeric form of cyanobacterial photosystem ii
55 | c3prqL_ |
| not modelled | 13.7 | 35 | PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 1 of 2). this file contains first monomer of psii3 dimer
56 | c1s5lL_ |
| not modelled | 13.7 | 35 | PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: architecture of the photosynthetic oxygen evolving center
57 | c3bz1L_ |
| not modelled | 13.7 | 35 | PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii (part 12 of 2). this file contains first monomer of psii dimer
58 | d2axtl1 |
| not modelled | 13.7 | 35 | Fold:Single transmembrane helix Superfamily:Photosystem II reaction center protein L, PsbL Family:PsbL-like
59 | c3bz2L_ |
| not modelled | 13.7 | 35 | PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii (part 22 of 2). this file contains second monomer of psii dimer
60 | c3a0hL_ |
| not modelled | 13.7 | 35 | PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of i-substituted photosystem ii complex
61 | c3a0bl_ |
| not modelled | 13.7 | 35 | PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of br-substituted photosystem ii complex
62 | c3a0bL_ |
| not modelled | 13.7 | 35 | PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of br-substituted photosystem ii complex
63 | c1s5ll_ |
| not modelled | 13.7 | 35 | PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: architecture of the photosynthetic oxygen evolving center
64 | c3arcL_ |
| not modelled | 13.7 | 35 | PDB header:electron transport, photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution
65 | c3a0hl_ |
| not modelled | 13.7 | 35 | PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of i-substituted photosystem ii complex
66 | c2axtL_ |
| not modelled | 13.7 | 35 | PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus
67 | c2axtl_ |
| not modelled | 13.7 | 35 | PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus
68 | c1l7cA_ |
| not modelled | 13.4 | 13 | PDB header:cell adhesion Chain: A: PDB Molecule:alpha e-catenin; PDBTitle: alpha-catenin fragment, residues 385-651
69 | c1s94A_ |
| not modelled | 13.0 | 11 | PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:s-syntaxin; PDBTitle: crystal structure of the habc domain of neuronal syntaxin from the2 squid loligo pealei
70 | d1s94a_ |
| not modelled | 13.0 | 11 | Fold:STAT-like Superfamily:t-snare proteins Family:t-snare proteins
71 | c1zvaA_ |
| not modelled | 12.9 | 10 | PDB header:viral protein Chain: A: PDB Molecule:e2 glycoprotein; PDBTitle: a structure-based mechanism of sars virus membrane fusion
72 | c3ok8A_ |
| not modelled | 12.4 | 8 | PDB header:protein binding Chain: A: PDB Molecule:brain-specific angiogenesis inhibitor 1-associated protein PDBTitle: i-bar of pinkbar
73 | d1i4da_ |
| not modelled | 12.2 | 13 | Fold:BAR/IMD domain-like Superfamily:BAR/IMD domain-like Family:Arfaptin, Rac-binding fragment
74 | d1eq1a_ |
| not modelled | 11.9 | 9 | Fold:Apolipophorin-III Superfamily:Apolipophorin-III Family:Apolipophorin-III
75 | d1r0da_ |
| not modelled | 10.7 | 11 | Fold:I/LWEQ domain Superfamily:I/LWEQ domain Family:I/LWEQ domain
76 | c3dtpA_ |
| not modelled | 10.6 | 18 | PDB header:contractile protein Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map
77 | c1eboE_ |
| not modelled | 10.2 | 18 | PDB header:viral protein Chain: E: PDB Molecule:ebola virus envelope protein chimera consisting PDBTitle: crystal structure of the ebola virus membrane-fusion2 subunit, gp2, from the envelope glycoprotein ectodomain
78 | c3b5nL_ |
| not modelled | 10.2 | 11 | PDB header:membrane protein Chain: L: PDB Molecule:protein transport protein sec9; PDBTitle: structure of the yeast plasma membrane snare complex
79 | c1gl2D_ |
| not modelled | 10.2 | 25 | PDB header:membrane protein Chain: D: PDB Molecule:syntaxin 8; PDBTitle: crystal structure of an endosomal snare core complex
80 | c3c98B_ |
| not modelled | 10.1 | 10 | PDB header:endocytosis/exocytosis Chain: B: PDB Molecule:syntaxin-1a; PDBTitle: revised structure of the munc18a-syntaxin1 complex
81 | c1l4aC_ |
| not modelled | 10.1 | 7 | PDB header:endocytosis/exocytosis Chain: C: PDB Molecule:s-snap25 fusion protein; PDBTitle: x-ray structure of the neuronal complexin/snare complex2 from the squid loligo pealei
82 | c3gxvD_ |
| not modelled | 10.0 | 15 | PDB header:hydrolase/replication Chain: D: PDB Molecule:replicative dna helicase; PDBTitle: three-dimensional structure of n-terminal domain of dnab2 helicase from helicobacter pylori and its interactions with3 primase
83 | c2dnxA_ |
| not modelled | 9.8 | 9 | PDB header:transport protein Chain: A: PDB Molecule:syntaxin-12; PDBTitle: solution structure of rsgi ruh-063, an n-terminal domain of2 syntaxin 12 from human cdna
84 | c3gxvC_ |
| not modelled | 9.6 | 15 | PDB header:hydrolase/replication Chain: C: PDB Molecule:replicative dna helicase; PDBTitle: three-dimensional structure of n-terminal domain of dnab2 helicase from helicobacter pylori and its interactions with3 primase
85 | d1oxza_ |
| not modelled | 9.5 | 15 | Fold:Spectrin repeat-like Superfamily:GAT-like domain Family:GAT domain
86 | c1oxzA_ |
| not modelled | 9.5 | 15 | PDB header:membrane protein Chain: A: PDB Molecule:adp-ribosylation factor binding protein gga1; PDBTitle: crystal structure of the human gga1 gat domain
87 | c1wyyB_ |
| not modelled | 9.2 | 16 | PDB header:viral protein Chain: B: PDB Molecule:e2 glycoprotein; PDBTitle: post-fusion hairpin conformation of the sars coronavirus spike2 glycoprotein
88 | d1wr6a1 |
| not modelled | 9.1 | 9 | Fold:Spectrin repeat-like Superfamily:GAT-like domain Family:GAT domain
89 | c2l9uA_ |
| not modelled | 9.1 | 13 | PDB header:membrane protein Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-3; PDBTitle: spatial structure of dimeric erbb3 transmembrane domain
90 | c1junB_ |
| not modelled | 9.0 | 25 | PDB header:transcription regulation Chain: B: PDB Molecule:c-jun homodimer; PDBTitle: nmr study of c-jun homodimer
91 | d1t01a1 |
| not modelled | 8.9 | 12 | Fold:Four-helical up-and-down bundle Superfamily:alpha-catenin/vinculin-like Family:alpha-catenin/vinculin
92 | c1n73C_ |
| not modelled | 8.9 | 15 | PDB header:blood clotting Chain: C: PDB Molecule:fibrin gamma chain; PDBTitle: fibrin d-dimer, lamprey complexed with the peptide ligand: gly-his-2 arg-pro-amide
93 | c1zv8I_ |
| not modelled | 8.9 | 7 | PDB header:viral protein Chain: I: PDB Molecule:e2 glycoprotein; PDBTitle: a structure-based mechanism of sars virus membrane fusion
94 | d1lvfa_ |
| not modelled | 8.8 | 15 | Fold:STAT-like Superfamily:t-snare proteins Family:t-snare proteins
95 | c1ciiA_ |
| not modelled | 8.6 | 12 | PDB header:transmembrane protein Chain: A: PDB Molecule:colicin ia; PDBTitle: colicin ia
96 | c3hnwB_ |
| not modelled | 8.5 | 12 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750
97 | c2qrxA_ |
| not modelled | 8.4 | 9 | PDB header:dna binding protein Chain: A: PDB Molecule:gm27569p; PDBTitle: crystal structure of drosophila melanogaster translin2 protein
98 | c2l16A_ |
| not modelled | 8.2 | 14 | PDB header:protein transport Chain: A: PDB Molecule:sec-independent protein translocase protein tatad; PDBTitle: solution structure of bacillus subtilits tatad protein in dpc micelles
99 | c1y4cA_ |
| not modelled | 8.1 | 10 | PDB header:de novo protein Chain: A: PDB Molecule:maltose binding protein fused with designed PDBTitle: designed helical protein fusion mbp