222 c3merA_ Probab=98.42   E-value=1.7e-07  Score=64.68  Aligned_columns=115  Identities=13%

Q ss_pred             HHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCC--CCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf             998758346897899974688689999999629983899975701--264036611002345523489999752237887
Q batch____        42 IQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP--MDPIVGVDFLQGDFRDELVMKALLERVGDSKVQ  119 (209)
Q Consensus        42 i~~kf~llkpg~~VLDLgaaPGg~t~~~~~~~~~~g~v~avDl~~--~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D  119 (209)
                      |.+....+.++ +|||+|||+|.++.+++++   ...++++|..+  +........-.....................+|
T Consensus         6 l~~~~~~~p~~-rVLDiGcG~G~~~~~La~~---~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   81 (173)
T c3merA_           6 LVSVANQIPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWE   81 (173)
T ss_dssp             HHHHGGGSCSS-EEEEETCTTSHHHHHHHTT---TCEEEEECSCHHHHHHHHHHHHHHTCCCCCCCCCSTTCCCCTTCEE
T ss_pred             HHHHHHHCCCC-EEEEECCCCCHHHHHHHHH---HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             99997308997-5999757987899999863---0433322343221111222222222222222222222222222233


Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCH
Q ss_conf             4897124346673001088889999999999999605588699994477687
Q batch____       120 VVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGF  171 (209)
Q Consensus       120 ~vl~D~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~Lk~gG~lV~Kvf~~~~~  171 (209)
                      .|++...           ....+.....+..+.++|+|||.|++..+...+.
T Consensus        82 ~v~~~~~-----------~~~~~~~~~~~~~~~~~LkpgG~l~~~~~~~~~~  122 (173)
T c3merA_          82 GIVSIFC-----------HLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQL  122 (173)
T ss_dssp             EEEEESC-----------CCCHHHHHHHHHHHHHHEEEEEEEEEEEECGGGG
T ss_pred             CCEEEEE-----------EECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
T ss_conf             4202556-----------5240010011134443148973899996486763