19/01/2012 08:38:24 : INFO  : Run start: Thu Jan 19 08:38:22 GMT 2012
19/01/2012 08:38:34 : INFO  : Initialised job
19/01/2012 08:38:37 : INFO  : Renaming log file 'phyre2_20120119_083821.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/e3ee9b02e1b8ae31/phyre_20120119_083821.log'
19/01/2012 08:38:39 : INFO  : Initialised job:
Sequence
>batch____
MTTTTPQRIGGWLLGPLAWLLVALLSTTLALLLYTAALSSPQTFQTLGGQALTTQILWGV
SFITAIALWYYTLWLTIAFFKRRRCVPKHYIIWLLISVLLAVKAFAFSPVEDGIAVRQLL
FTLLATALIVPYFKRSSRVKATFVNP

19/01/2012 08:38:41 : INFO  : Checked sequence
19/01/2012 08:38:47 : INFO  : Finding homologues with PSI-BLAST
19/01/2012 08:38:49 : INFO  : PSI-BLAST 3 iterations
19/01/2012 08:39:49 : INFO  : PSI-BLAST 5 iterations
19/01/2012 08:40:57 : INFO  : Finished PSI-BLAST
19/01/2012 08:41:02 : INFO  : Running Buildali to generate a3m file
19/01/2012 08:45:56 : INFO  : Converting to HMM
19/01/2012 08:46:00 : INFO  : Calibrating HMM
19/01/2012 08:46:17 : INFO  : Searching HMM database
19/01/2012 08:49:26 : INFO  : Finished buildali
19/01/2012 08:49:29 : INFO  : Predicting secondary structure
19/01/2012 08:49:43 : INFO  : Predicted secondary structure (PSI-Pred)
19/01/2012 08:49:46 : INFO  : Predicting Disordered regions
19/01/2012 08:49:53 : INFO  : Predicted Disorder (Disopred)
19/01/2012 08:49:56 : INFO  : Running memsat_svm check
19/01/2012 08:53:40 : INFO  : Running memsat_svm full
19/01/2012 08:58:48 : INFO  : Predicted Transmembrane (memsat_svm) ID 'e3ee9b02e1b8ae31'
19/01/2012 08:58:53 : INFO  : Initialising fold library search
19/01/2012 08:58:59 : INFO  : Initialised search input
19/01/2012 08:59:03 : INFO  : Building Ensemble models
19/01/2012 08:59:09 : INFO  : Building hh.c2k1aA_.model.1.pdb
19/01/2012 08:59:35 : INFO  : Building c2k1aA_.1.pdb
19/01/2012 09:00:01 : INFO  : Building c2kncA_.2.pdb
19/01/2012 09:00:25 : INFO  : Building c2bbjB_.3.pdb
19/01/2012 09:00:49 : INFO  : Building c2jpnA_.4.pdb
19/01/2012 09:01:14 : INFO  : Building c2lcyA_.5.pdb
19/01/2012 09:01:38 : INFO  : Building d2iuba2.6.pdb
19/01/2012 09:02:04 : INFO  : Building c3csyJ_.7.pdb
19/01/2012 09:02:31 : INFO  : Building c3s88J_.8.pdb
19/01/2012 09:02:55 : INFO  : Building d1wixa_.9.pdb
19/01/2012 09:03:20 : INFO  : Building d3ehbb2.10.pdb
19/01/2012 09:03:44 : INFO  : Building d1b43a1.11.pdb
19/01/2012 09:04:09 : INFO  : Building c1ql1A_.12.pdb
19/01/2012 09:04:35 : INFO  : Building d1q9ca_.13.pdb
19/01/2012 09:05:00 : INFO  : Building c2ld7B_.14.pdb
19/01/2012 09:05:25 : INFO  : Building c3dvuC_.15.pdb
19/01/2012 09:05:50 : INFO  : Building c2ponA_.16.pdb
19/01/2012 09:06:13 : INFO  : Building c2p1lF_.17.pdb
19/01/2012 09:06:38 : INFO  : Building c1m8oB_.18.pdb
19/01/2012 09:07:02 : INFO  : Building d1ppjc1.19.pdb
19/01/2012 09:07:28 : INFO  : Building d2k0bx1.20.pdb
19/01/2012 09:08:23 : INFO  : Finished HH model building
19/01/2012 09:08:26 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
19/01/2012 09:11:11 : INFO  : html domain output complete ID 'e3ee9b02e1b8ae31'
19/01/2012 09:17:42 : INFO  : Run end  : Thu Jan 19 09:17:40 GMT 2012
