BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (598 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AFA3 Nitrate/nitrite sensor protein narX n=127 Tax=Ga... 1228 0.0 UniRef50_B4TXT2 Nitrate/nitrite sensor protein NarX n=69 Tax=Ent... 1058 0.0 UniRef50_A4TJU9 Nitrate/nitrite sensor protein n=29 Tax=Enteroba... 516 e-145 UniRef50_B4EWG1 Nitrate/nitrite teo-component system, sensor kin... 467 e-130 UniRef50_B2Q6G3 Putative uncharacterized protein n=3 Tax=Enterob... 460 e-128 UniRef50_Q0HUB7 Signal transduction histidine kinase, nitrate/ni... 442 e-122 UniRef50_A6D1I3 Signal transduction histidine kinase, nitrate/ni... 339 2e-91 UniRef50_A1U593 Integral membrane sensor signal transduction his... 334 7e-90 UniRef50_B4S080 Signal transduction histidine kinase, nitrate/ni... 295 4e-78 UniRef50_A4VHY8 Two-component sensor NarX n=3 Tax=Pseudomonas Re... 291 4e-77 UniRef50_Q5QWJ9 Nitrate/nitrite sensor histidine kinase n=1 Tax=... 290 1e-76 UniRef50_Q8VUK2 Putative nitrate/nitrite sensor protein n=1 Tax=... 290 1e-76 UniRef50_Q0A9X9 Signal transduction histidine kinase, nitrate/ni... 276 2e-72 UniRef50_Q3SJ17 Periplasmic Sensor Signal Transduction Histidine... 268 5e-70 UniRef50_Q2SF45 Signal transduction histidine kinase, nitrate/ni... 261 6e-68 UniRef50_B7UUR7 Two-component sensor NarX n=7 Tax=Gammaproteobac... 257 8e-67 UniRef50_Q5P3L3 Nitrate/nitrite TWO-component sensor NARX n=1 Ta... 256 2e-66 UniRef50_C7RBW7 Histidine kinase n=1 Tax=Kangiella koreensis DSM... 255 4e-66 UniRef50_C4K985 Histidine kinase n=1 Tax=Thauera sp. MZ1T RepID=... 230 1e-58 UniRef50_A7JYP2 Histidine kinase domain protein n=7 Tax=Vibrio R... 229 2e-58 UniRef50_A8FUN8 Two-component sensor NarX n=3 Tax=Shewanella Rep... 224 5e-57 UniRef50_A8GHJ7 Integral membrane sensor signal transduction his... 223 1e-56 UniRef50_Q9F0Y0 Nitrate/nitrite sensor protein n=1 Tax=Pseudomon... 221 4e-56 UniRef50_C5S0V3 Nitrate/nitrite sensor protein NarQ n=6 Tax=Gamm... 219 2e-55 UniRef50_Q5E3J3 Sensory histidine kinase in two-component regula... 209 2e-52 UniRef50_A6FC55 Hypothetical nitrate/nitrite sensor protein NarQ... 208 4e-52 UniRef50_A4BGQ5 Signal transduction histidine kinase, nitrate/ni... 204 1e-50 UniRef50_Q2C653 Hypothetical nitrate/nitrite sensor protein NarQ... 203 1e-50 UniRef50_P27896 Nitrate/nitrite sensor protein narQ n=113 Tax=En... 201 9e-50 UniRef50_B8EB80 Histidine kinase n=20 Tax=Shewanella RepID=B8EB8... 200 2e-49 UniRef50_P44604 Sensor protein narQ homolog n=30 Tax=Gammaproteo... 199 3e-49 UniRef50_A0KIL7 Nitrate/nitrite sensor histidine kinase NarQ n=2... 198 5e-49 UniRef50_Q7N5B4 Similar to nitrate/nitrite sensor protein NarX n... 195 4e-48 UniRef50_Q4FU45 Signal transduction histidine kinase sensor n=2 ... 193 2e-47 UniRef50_D0IAW0 Nitrate/nitrite sensor protein n=3 Tax=Gammaprot... 191 9e-47 UniRef50_A5EZZ3 Nitrate/nitrite sensor protein NarQ n=51 Tax=Vib... 184 1e-44 UniRef50_B2CI54 Integral membrane sensor signal transduction his... 176 3e-42 UniRef50_C0N1R0 Histidine kinase domain protein n=1 Tax=Methylop... 169 3e-40 UniRef50_C6QH09 Histidine kinase n=1 Tax=Hyphomicrobium denitrif... 169 4e-40 UniRef50_Q1H473 Signal transduction histidine kinase, nitrate/ni... 168 6e-40 UniRef50_Q47HU2 GAF:ATP-binding region, ATPase-like:Histidine ki... 167 7e-40 UniRef50_C4GHV1 Putative uncharacterized protein n=1 Tax=Kingell... 167 9e-40 UniRef50_Q7NV12 Transmembrane nitrate/nitrite sensor kinase tran... 166 3e-39 UniRef50_A2SGG0 Signal transduction histidine kinase, nitrate/ni... 154 1e-35 UniRef50_Q5NYZ8 Nitrate/nitrite sensor kinase n=1 Tax=Aromatoleu... 154 1e-35 UniRef50_C1D9F9 NarX n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 153 2e-35 UniRef50_B4RLW4 NarX/NarQ n=17 Tax=Neisseria RepID=B4RLW4_NEIG2 150 9e-35 UniRef50_Q1ZGB4 Nitrate/nitrite sensor protein n=1 Tax=Psychromo... 148 4e-34 UniRef50_UPI00016987BE Periplasmic Sensor Signal Transduction Hi... 148 7e-34 UniRef50_C4KA07 GAF sensor signal transduction histidine kinase ... 147 1e-33 UniRef50_A4G5M3 Putative Nitrate/nitrite sensor protein narX n=1... 147 1e-33 UniRef50_A5WD78 Integral membrane sensor signal transduction his... 145 6e-33 UniRef50_Q46R21 GAF:ATP-binding region, ATPase-like:Histidine ki... 144 7e-33 UniRef50_C7I506 GAF sensor signal transduction histidine kinase ... 144 8e-33 UniRef50_A9LZC9 Two-component system, NarL family, nitrate/nitri... 144 1e-32 UniRef50_C0DXB9 Putative uncharacterized protein n=1 Tax=Eikenel... 142 3e-32 UniRef50_B2JVQ4 Integral membrane sensor signal transduction his... 142 3e-32 UniRef50_B9Z081 Multi-sensor signal transduction histidine kinas... 138 7e-31 UniRef50_C6XAG1 Histidine kinase n=1 Tax=Methylovorus sp. SIP3-4... 134 1e-29 UniRef50_A1W358 Signal transduction histidine kinase, nitrate/ni... 130 1e-28 UniRef50_B8GUD0 GAF sensor signal transduction histidine kinase ... 128 6e-28 UniRef50_C5T4I9 GAF sensor signal transduction histidine kinase ... 123 2e-26 UniRef50_D2T798 Sensor for nitrate reductase system, protein his... 117 1e-24 UniRef50_A9WFF8 Histidine kinase dimerisation and phosphoaccepto... 105 4e-21 UniRef50_C5SBA0 Histidine kinase n=1 Tax=Allochromatium vinosum ... 105 5e-21 UniRef50_Q5MJZ2 Nitrate/nitrite sensor protein n=1 Tax=Methyloph... 105 7e-21 UniRef50_C0DXM5 Sensor protein n=1 Tax=Eikenella corrodens ATCC ... 105 7e-21 UniRef50_Q7NE94 Glr3986 protein n=1 Tax=Gloeobacter violaceus Re... 104 1e-20 UniRef50_Q3SG40 GAF Sensor Signal Transduction Histidine Kinase ... 103 2e-20 UniRef50_Q2Y9N2 Periplasmic sensor signal transduction histidine... 103 3e-20 UniRef50_UPI00016AFAA4 response regulator/sensory box histidine ... 102 5e-20 UniRef50_D1CB59 GAF sensor signal transduction histidine kinase ... 101 1e-19 UniRef50_C3XBQ9 DNA-binding response regulator n=2 Tax=Oxalobact... 100 2e-19 UniRef50_UPI0001692E35 hypothetical protein Plarl_02603 n=1 Tax=... 100 2e-19 UniRef50_C8NE28 Sensor histidine kinase n=1 Tax=Granulicatella a... 99 3e-19 UniRef50_B4CYV7 Histidine kinase n=1 Tax=Chthoniobacter flavus E... 99 4e-19 UniRef50_C6P056 GAF sensor signal transduction histidine kinase ... 99 4e-19 UniRef50_C6CGT0 PAS/PAC sensor signal transduction histidine kin... 99 5e-19 UniRef50_B9TQ72 Putative uncharacterized protein (Fragment) n=1 ... 99 7e-19 UniRef50_B3E9K4 Response regulator receiver sensor signal transd... 98 9e-19 UniRef50_D2SEJ2 Integral membrane sensor signal transduction his... 98 9e-19 UniRef50_C3K8H6 Putative two-component system, sensor kinase n=1... 98 1e-18 UniRef50_Q0A821 Signal transduction histidine kinase, nitrate/ni... 97 2e-18 UniRef50_C4DC51 Histidine kinase with GAF domain n=2 Tax=Actinom... 97 2e-18 UniRef50_O32198 Sensor histidine kinase liaS n=5 Tax=Bacillus Re... 96 3e-18 UniRef50_C8WYI2 Histidine kinase n=2 Tax=Alicyclobacillus acidoc... 96 4e-18 UniRef50_D0MDW3 Multi-sensor signal transduction histidine kinas... 96 5e-18 UniRef50_A5UUR7 Multi-sensor signal transduction histidine kinas... 95 6e-18 UniRef50_C3BDP5 Putative uncharacterized protein n=3 Tax=Bacillu... 95 7e-18 UniRef50_Q1IXN3 Periplasmic sensor signal transduction histidine... 95 9e-18 UniRef50_UPI0001AEDAE1 GAF sensor signal transduction histidine ... 94 1e-17 UniRef50_C7MLQ8 Signal transduction histidine kinase n=1 Tax=Cry... 94 1e-17 UniRef50_D1C6S2 Histidine kinase n=1 Tax=Sphaerobacter thermophi... 94 2e-17 UniRef50_B9L060 Putative two component system histidine kinase n... 94 2e-17 UniRef50_B0C7C8 GAF domain protein n=1 Tax=Acaryochloris marina ... 94 2e-17 UniRef50_C2C0V0 Possible histidine kinase n=5 Tax=Listeria RepID... 93 2e-17 UniRef50_C1ACX8 Two-component histidine kinase n=1 Tax=Gemmatimo... 93 3e-17 UniRef50_B9XNW0 Multi-sensor signal transduction histidine kinas... 93 3e-17 UniRef50_B9TG52 Putative uncharacterized protein n=1 Tax=Ricinus... 93 3e-17 UniRef50_D2B2V1 Histidine kinase n=1 Tax=Streptosporangium roseu... 93 3e-17 UniRef50_A6CIM0 Multi-sensor signal transduction histidine kinas... 93 3e-17 UniRef50_B9LCJ4 GAF sensor signal transduction histidine kinase ... 93 4e-17 UniRef50_A6TT52 Integral membrane sensor signal transduction his... 92 5e-17 UniRef50_C6CZA6 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 92 5e-17 UniRef50_Q025Z0 Histidine kinase n=1 Tax=Candidatus Solibacter u... 92 5e-17 UniRef50_D0BKY9 Sensor histidine kinase VraS n=1 Tax=Granulicate... 92 6e-17 UniRef50_A8KXF1 GAF sensor signal transduction histidine kinase ... 92 6e-17 UniRef50_D2AQR2 Histidine kinase n=1 Tax=Streptosporangium roseu... 92 7e-17 UniRef50_B8D0J3 Histidine kinase n=2 Tax=Clostridia RepID=B8D0J3... 92 7e-17 UniRef50_D1VQR6 GAF sensor signal transduction histidine kinase ... 91 9e-17 UniRef50_B2VGC1 HrpX protein (Hrp cluster) n=6 Tax=Enterobacteri... 91 9e-17 UniRef50_B5I2X6 Two-component system sensor kinase n=10 Tax=Stre... 91 1e-16 UniRef50_Q47KE3 GAF:ATP-binding region, ATPase-like n=24 Tax=Act... 91 1e-16 UniRef50_C4RLN3 Histidine kinase n=1 Tax=Micromonospora sp. ATCC... 91 1e-16 UniRef50_B1ZXD3 Integral membrane sensor signal transduction his... 91 1e-16 UniRef50_D2B559 Histidine kinase n=1 Tax=Streptosporangium roseu... 91 1e-16 UniRef50_B8CZJ7 Integral membrane sensor signal transduction his... 91 2e-16 UniRef50_C7MS84 Histidine kinase with GAF domain protein n=1 Tax... 90 2e-16 UniRef50_Q67S65 Two-component sensor histidine kinase n=1 Tax=Sy... 90 2e-16 UniRef50_D1C419 Histidine kinase n=1 Tax=Sphaerobacter thermophi... 90 2e-16 UniRef50_D2L4L4 Histidine kinase n=1 Tax=Desulfovibrio sp. FW101... 90 2e-16 UniRef50_Q2SUK5 Two-component hybrid sensor and regulator n=33 T... 90 2e-16 UniRef50_B1Z4G8 Multi-sensor signal transduction histidine kinas... 90 3e-16 UniRef50_A4AC75 Two-component system sensor kinase n=1 Tax=Congr... 90 3e-16 UniRef50_B2TG29 PAS/PAC sensor signal transduction histidine kin... 90 3e-16 UniRef50_D2PW73 Histidine kinase n=1 Tax=Kribbella flavida DSM 1... 90 3e-16 UniRef50_D1CE67 Multi-sensor signal transduction histidine kinas... 90 3e-16 UniRef50_D1C657 GAF sensor signal transduction histidine kinase ... 90 3e-16 UniRef50_Q023R2 PAS/PAC sensor signal transduction histidine kin... 89 3e-16 UniRef50_C7QZV7 Histidine kinase n=3 Tax=Micrococcineae RepID=C7... 89 3e-16 UniRef50_C5AIA0 Multi-sensor signal transduction histidine kinas... 89 4e-16 UniRef50_UPI00017468E2 histidine kinase n=1 Tax=Verrucomicrobium... 89 4e-16 UniRef50_Q1GZT2 Putative signal transduction histidine kinase n=... 89 4e-16 UniRef50_D2B7Q9 Histidine kinase n=1 Tax=Streptosporangium roseu... 89 4e-16 UniRef50_A4X9X2 ATP-binding region, ATPase domain protein domain... 89 4e-16 UniRef50_A1AXR2 Signal transduction histidine kinase, nitrate/ni... 89 5e-16 UniRef50_Q81FX4 Two-component sensor protein yvqE n=44 Tax=Bacil... 89 6e-16 UniRef50_C3B362 Two-component sensor protein yhcY n=4 Tax=Bacill... 88 8e-16 UniRef50_A9B1S5 Multi-sensor signal transduction histidine kinas... 88 8e-16 UniRef50_C6XAR1 PAS/PAC sensor signal transduction histidine kin... 88 9e-16 UniRef50_D2PPC0 Histidine kinase n=1 Tax=Kribbella flavida DSM 1... 88 1e-15 UniRef50_UPI0001692C7B sensor histidine kinase n=1 Tax=Paenibaci... 88 1e-15 UniRef50_C0GH42 Multi-sensor signal transduction histidine kinas... 87 1e-15 UniRef50_D1UN54 PAS/PAC sensor signal transduction histidine kin... 87 1e-15 UniRef50_C0XNJ5 Two component system histidine kinase n=1 Tax=Co... 87 1e-15 UniRef50_A1WYG6 Histidine kinase n=1 Tax=Halorhodospira halophil... 87 1e-15 UniRef50_B5HYF1 Two-component system sensor kinase n=10 Tax=Stre... 87 2e-15 UniRef50_Q1IRP5 Multi-sensor signal transduction histidine kinas... 87 2e-15 UniRef50_UPI00017449FC GAF domain protein n=1 Tax=Verrucomicrobi... 87 2e-15 UniRef50_B9TKD1 Putative uncharacterized protein (Fragment) n=1 ... 87 2e-15 UniRef50_B4DA10 PAS/PAC sensor signal transduction histidine kin... 87 2e-15 UniRef50_A1AUQ4 PAS/PAC sensor signal transduction histidine kin... 87 2e-15 UniRef50_B4DAE0 Integral membrane sensor signal transduction his... 87 2e-15 UniRef50_C8X7N0 Histidine kinase n=1 Tax=Nakamurella multipartit... 86 3e-15 UniRef50_C4DM39 Signal transduction histidine kinase, COG4585 n=... 86 3e-15 UniRef50_C1F5E9 Two-component system sensor protein, putative n=... 86 3e-15 UniRef50_B2JH43 PAS/PAC sensor signal transduction histidine kin... 86 3e-15 UniRef50_Q67JS1 Two-component sensor histidine kinase n=1 Tax=Sy... 86 4e-15 UniRef50_B2AKD3 Putative multi-sensor signal transduction histid... 86 4e-15 UniRef50_A5FQK5 Multi-sensor signal transduction histidine kinas... 86 4e-15 UniRef50_C4DDE2 Signal transduction histidine kinase, COG4585 n=... 86 4e-15 UniRef50_B6JD37 Signal transduction histidine kinase containing ... 86 4e-15 UniRef50_C8XI21 GAF sensor signal transduction histidine kinase ... 86 4e-15 UniRef50_B4D5C3 Histidine kinase n=1 Tax=Chthoniobacter flavus E... 86 4e-15 UniRef50_A9VI28 Histidine kinase n=10 Tax=Bacillus cereus group ... 86 5e-15 UniRef50_B3U4S0 Response regulator receiver n=1 Tax=Candidatus N... 86 5e-15 UniRef50_Q2B2D2 Two-component sensor histidine kinase n=2 Tax=Ba... 86 5e-15 UniRef50_P96685 Sensor histidine kinase ydfH n=4 Tax=Bacillus su... 86 6e-15 UniRef50_B9L456 Two-component sensor histidine kinase n=1 Tax=Th... 86 6e-15 UniRef50_A8L3C7 Integral membrane sensor signal transduction his... 85 6e-15 UniRef50_A0K0P6 Putative signal transduction histidine kinase n=... 85 7e-15 UniRef50_A6SWF1 Sensory box histidine kinase n=1 Tax=Janthinobac... 85 7e-15 UniRef50_C7MN85 Histidine kinase n=1 Tax=Cryptobacterium curtum ... 85 7e-15 UniRef50_D0LYS5 PAS/PAC sensor signal transduction histidine kin... 85 7e-15 UniRef50_UPI0001C312DE integral membrane sensor signal transduct... 85 7e-15 UniRef50_B8HT67 GAF sensor signal transduction histidine kinase ... 85 8e-15 UniRef50_C0Q9H3 Sensory box histidine kinase/response regulator ... 85 8e-15 UniRef50_C9NJB7 GAF sensor signal transduction histidine kinase ... 85 8e-15 UniRef50_B5YIR1 Sensory box histidine kinase, putative n=1 Tax=T... 85 9e-15 UniRef50_B9XSJ3 Multi-sensor signal transduction histidine kinas... 85 9e-15 UniRef50_C5AKB3 Sensory box histidine kinase n=1 Tax=Burkholderi... 85 9e-15 UniRef50_C1B303 Putative two-component histidine kinase n=2 Tax=... 85 9e-15 UniRef50_A1K9T2 Putative two-component sensor histidine kinase n... 85 1e-14 UniRef50_A1ATT5 PAS/PAC sensor signal transduction histidine kin... 85 1e-14 UniRef50_A1ASJ6 Multi-sensor signal transduction histidine kinas... 84 1e-14 UniRef50_A3UAN0 Two-component sensor histidine kinase n=1 Tax=Cr... 84 1e-14 UniRef50_A1WDG5 Integral membrane sensor signal transduction his... 84 1e-14 UniRef50_C6J7D3 ATP-binding region ATPase domain-containing prot... 84 1e-14 UniRef50_B7IV98 Sensor histidine kinase n=76 Tax=Bacillales RepI... 84 1e-14 UniRef50_C1I713 Two-component sensor histidine kinase n=1 Tax=Cl... 84 1e-14 UniRef50_Q3M1D8 Serine/threonine protein kinase and signal trans... 84 1e-14 UniRef50_A0NNP2 Signal transduction histidine kinase n=2 Tax=Lab... 84 1e-14 UniRef50_A1SFF3 Histidine kinase, dimerisation and phosphoaccept... 84 2e-14 UniRef50_Q2LRG0 Signal transduction histidine kinase n=1 Tax=Syn... 84 2e-14 UniRef50_Q0KDJ4 Signal transduction histidine kinase containing ... 84 2e-14 UniRef50_Q1IJ87 Histidine kinase n=1 Tax=Candidatus Koribacter v... 84 2e-14 UniRef50_A9WAP8 ATP-binding region ATPase domain protein n=3 Tax... 84 2e-14 UniRef50_Q0B944 Multi-sensor signal transduction histidine kinas... 84 2e-14 UniRef50_D0MHQ4 PAS/PAC sensor signal transduction histidine kin... 84 2e-14 UniRef50_A4VTF8 Signal transduction histidine kinase n=6 Tax=Str... 84 2e-14 UniRef50_Q3SII8 Possible Sensor with PAS/PAC domain n=1 Tax=Thio... 83 3e-14 UniRef50_Q1D524 Sensor histidine kinase n=2 Tax=Cystobacterineae... 83 3e-14 UniRef50_UPI000174440D histidine kinase n=2 Tax=Verrucomicrobium... 83 3e-14 UniRef50_C7Q6M5 GAF sensor signal transduction histidine kinase ... 83 3e-14 UniRef50_A9B7C8 GAF sensor signal transduction histidine kinase ... 83 3e-14 UniRef50_A5V147 Integral membrane sensor signal transduction his... 83 3e-14 UniRef50_B1Y7S0 Histidine kinase n=1 Tax=Leptothrix cholodnii SP... 83 3e-14 UniRef50_C6CVS1 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 83 3e-14 UniRef50_P54663 Sensor protein degS n=33 Tax=Bacillales RepID=DE... 83 3e-14 UniRef50_B2TAX2 PAS/PAC sensor signal transduction histidine kin... 83 3e-14 UniRef50_C6CWJ2 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 83 3e-14 UniRef50_Q21Y83 Putative PAS/PAC sensor protein n=1 Tax=Rhodofer... 83 3e-14 UniRef50_C0INV3 Two-component system sensor protein n=1 Tax=uncu... 83 4e-14 UniRef50_Q0AF09 Multi-sensor signal transduction histidine kinas... 82 4e-14 UniRef50_C1XS12 Histidine kinase with GAF domain n=1 Tax=Meiothe... 82 4e-14 UniRef50_C0ZEI3 Two-component sensor histidine kinase n=2 Tax=Br... 82 4e-14 UniRef50_UPI0001C31D26 integral membrane sensor signal transduct... 82 5e-14 UniRef50_Q8ERY5 Two-component sensor histidine kinase n=1 Tax=Oc... 82 5e-14 UniRef50_B4CY61 Integral membrane sensor signal transduction his... 82 5e-14 UniRef50_B9XCF3 Integral membrane sensor signal transduction his... 82 5e-14 UniRef50_C6WEB2 GAF sensor signal transduction histidine kinase ... 82 5e-14 UniRef50_C1F9F5 Two component regulator propeller/histidine kina... 82 5e-14 UniRef50_A1WDW7 Multi-sensor signal transduction histidine kinas... 82 5e-14 UniRef50_C7RBI0 Histidine kinase n=1 Tax=Kangiella koreensis DSM... 82 5e-14 UniRef50_C0N6H4 Putative uncharacterized protein n=1 Tax=Methylo... 82 6e-14 UniRef50_Q5SJ33 Sensor histidine kinase n=3 Tax=Thermus RepID=Q5... 82 6e-14 UniRef50_A3NKQ6 Signal transduction histidine kinase n=29 Tax=Bu... 82 6e-14 UniRef50_C1RNK2 Signal transduction histidine kinase, COG4585 n=... 82 6e-14 UniRef50_Q1IM12 PAS sensor signal transduction histidine kinase ... 82 6e-14 UniRef50_A4XZI6 Multi-sensor signal transduction histidine kinas... 82 7e-14 UniRef50_Q9KER5 Two-component sensor histidine kinase n=1 Tax=Ba... 82 7e-14 UniRef50_B2UDW5 Multi-sensor signal transduction histidine kinas... 82 7e-14 UniRef50_D2AUR1 Histidine kinase n=1 Tax=Streptosporangium roseu... 82 8e-14 UniRef50_D0L9K1 Histidine kinase dimerization and phosphoaccepto... 82 8e-14 UniRef50_C6NZS6 Multi-sensor signal transduction histidine kinas... 81 1e-13 UniRef50_D2BHE9 Sensor histidine kinase n=5 Tax=Dehalococcoides ... 81 1e-13 UniRef50_Q74GJ3 Sensory box histidine kinase n=1 Tax=Geobacter s... 81 1e-13 UniRef50_Q9X8S1 Putative two-component system sensor kinase n=2 ... 81 1e-13 UniRef50_Q5NY28 Sensory histidine kinase n=1 Tax=Aromatoleum aro... 81 1e-13 UniRef50_C1CWD4 Putative histidine kinase, classic; putative mem... 81 1e-13 UniRef50_B9XQH3 PAS/PAC sensor signal transduction histidine kin... 81 1e-13 UniRef50_C1B0L5 Two-component histidine kinase n=5 Tax=Rhodococc... 81 1e-13 UniRef50_Q1AZP1 Periplasmic sensor signal transduction histidine... 81 1e-13 UniRef50_C9NA65 Histidine kinase n=5 Tax=Streptomyces RepID=C9NA... 81 1e-13 UniRef50_A3TM13 Putative two component system histidine kinase n... 81 1e-13 UniRef50_A3DEX1 Histidine kinase n=5 Tax=Clostridium RepID=A3DEX... 81 1e-13 UniRef50_C1XXG1 Signal transduction histidine kinase, COG4585 n=... 81 1e-13 UniRef50_B1HRK4 Sensor protein n=2 Tax=Bacillaceae RepID=B1HRK4_... 81 1e-13 UniRef50_A6TSW3 Histidine kinase n=2 Tax=Alkaliphilus RepID=A6TS... 80 2e-13 UniRef50_Q9KAS3 Two-component sensor histidine kinase n=1 Tax=Ba... 80 2e-13 >UniRef50_P0AFA3 Nitrate/nitrite sensor protein narX n=127 Tax=Gammaproteobacteria RepID=NARX_ECO57 Length = 598 Score = 1228 bits (3176), Expect = 0.0, Method: Compositional matrix adjust. Identities = 598/598 (100%), Positives = 598/598 (100%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL Sbjct: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 Query: 61 LAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNR 120 LAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNR Sbjct: 61 LAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNR 120 Query: 121 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ 180 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ Sbjct: 121 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ 180 Query: 181 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG Sbjct: 181 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF 300 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF Sbjct: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF 300 Query: 301 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ 360 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ Sbjct: 301 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ 360 Query: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG Sbjct: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 Query: 421 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV 480 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV Sbjct: 421 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV 480 Query: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG 540 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG Sbjct: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG 540 Query: 541 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE 598 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE Sbjct: 541 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE 598 >UniRef50_B4TXT2 Nitrate/nitrite sensor protein NarX n=69 Tax=Enterobacteriaceae RepID=B4TXT2_SALSV Length = 598 Score = 1058 bits (2737), Expect = 0.0, Method: Compositional matrix adjust. Identities = 514/598 (85%), Positives = 543/598 (90%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 M KRC SPLTLVNQ+ALIV+LSTAIG+AGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL Sbjct: 1 MFKRCFSPLTLVNQLALIVMLSTAIGVAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 Query: 61 LAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNR 120 LAAVPL KD+ L+ EMEQTAFS ELTRAAERDGQ QL+ LQDYW NEL P L AQN Sbjct: 61 LAAVPLDAKDQKLLDEMEQTAFSPELTRAAERDGQQKQLKALQDYWHNELSPGLQHAQNA 120 Query: 121 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ 180 V+ DV++FVAGLD+LV+ FD TTE+RIE VVLVHRVMA+FMALLLVFTIIWLR RLLQ Sbjct: 121 HAVAEDVTRFVAGLDRLVTSFDHTTELRIERVVLVHRVMAIFMALLLVFTIIWLRVRLLQ 180 Query: 181 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 PW+QLL+MA AVS RDFTQRANISGRNEMA LG+ALNNMS ELAESYAVLEQRVQEKTAG Sbjct: 181 PWKQLLSMARAVSQRDFTQRANISGRNEMAALGSALNNMSEELAESYAVLEQRVQEKTAG 240 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF 300 LEHKNQILSFLWQANRRLHS APLCERLSPVLNGLQNLT L DIELRVYD +DE+NHQEF Sbjct: 241 LEHKNQILSFLWQANRRLHSPAPLCERLSPVLNGLQNLTQLHDIELRVYDLEDEDNHQEF 300 Query: 301 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ 360 TCQ D++CDDKGC LCPR LP+ + GTTLKWRL DSHTQYGILLATLP GRHLSHDQQQ Sbjct: 301 TCQSDISCDDKGCHLCPRSALPMINGGTTLKWRLTDSHTQYGILLATLPYGRHLSHDQQQ 360 Query: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG Sbjct: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 Query: 421 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV 480 D LPESSR LLSQIRNELN SWAQLRELLTTFRLQLTEPGLRPALEASC+E+SA+FGF V Sbjct: 421 DVLPESSRVLLSQIRNELNCSWAQLRELLTTFRLQLTEPGLRPALEASCQEFSARFGFTV 480 Query: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG 540 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHS A +VVVTV Q QVKL VQDNGCG Sbjct: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSHADDVVVTVTQCGKQVKLKVQDNGCG 540 Query: 541 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE 598 VPENA RSNHYGMIIMRDRAQSLRGDC+VRRRE+GGTEV VTFIPE FT+ QGDTHE Sbjct: 541 VPENAERSNHYGMIIMRDRAQSLRGDCQVRRRETGGTEVTVTFIPETNFTETQGDTHE 598 >UniRef50_A4TJU9 Nitrate/nitrite sensor protein n=29 Tax=Enterobacteriaceae RepID=A4TJU9_YERPP Length = 593 Score = 516 bits (1330), Expect = e-145, Method: Compositional matrix adjust. Identities = 285/595 (47%), Positives = 398/595 (66%), Gaps = 7/595 (1%) Query: 2 LKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLL 61 +KR L+PL VNQ+AL+++L +GLAGM +S W+ Q +QG+AHAIN+AGSLRMQSYRLL Sbjct: 1 MKRYLTPL--VNQIALLMILLGMLGLAGMVISSWMAQSIQGNAHAINQAGSLRMQSYRLL 58 Query: 62 AAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRE 121 + +PL + + +EQ S +L +A R+G + Q Q ++ YW++ L P L +A++ + Sbjct: 59 SMIPLDSNELSYLVALEQDKTSHDLQQALLREGLMGQYQQIERYWQDTLKPQLQQAKHPD 118 Query: 122 TVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQP 181 V+A V+ FV LD LV D TE R+ V L+ V ++ LL+ I +LR RLL+P Sbjct: 119 EVAASVADFVHQLDALVLAIDHKTEQRLLQVTLIPLVFSLLTLSLLLAMIYYLRRRLLRP 178 Query: 182 WRQLLAMASAVSHRDFTQRANIS-GRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 W +L++MA+A+ DF+QR + R+EM MLGTALN MS EL+ Y LEQRV KTA Sbjct: 179 WLKLISMANAIGRGDFSQRYTLDYQRDEMGMLGTALNRMSQELSLIYGDLEQRVVNKTAD 238 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF 300 L+ KNQ+L+FL+ ++R+LH+ PL ERL+PV+ LQ LT L ++++ +Y+ +H Sbjct: 239 LQQKNQVLAFLYHSSRQLHTHQPLSERLAPVIEQLQALTTLENVQICLYENHLYRDHVNH 298 Query: 301 TCQPD-MTCDDKGCQLCPRG-VLPVG--DRGTTLKWRLADSHTQYGILLATLPQGRHLSH 356 + + ++ L G V P+ + +L W L+D QYG+LLA P L+ Sbjct: 299 NADAEYLMPKNRPASLTISGPVRPISHPELWQSLSWSLSDKLGQYGLLLAKQPLDNPLNS 358 Query: 357 DQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL 416 DQQQLVD LVEQLT+TLAL+ + QQQL++MEER+ IARELHDSIAQSLSC+K+Q+SCL Sbjct: 359 DQQQLVDMLVEQLTSTLALESQAKHQQQLLLMEERSAIARELHDSIAQSLSCLKIQISCL 418 Query: 417 QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKF 476 QMQ LPE+S L+ Q+R+ELN ++ QLRELLTTFRL+L E L AL+A E+S + Sbjct: 419 QMQTPDLPENSNLLIKQMRDELNIAYRQLRELLTTFRLKLNEATLEAALQALVNEFSERA 478 Query: 477 GFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQD 536 G + YQLPP VP+HQAIH++ I REAL+N KH++ASE V V V +++ D Sbjct: 479 GLSITFKYQLPPDQVPNHQAIHMVNIVREALNNIYKHARASEATVNVHLEQGDVVMSITD 538 Query: 537 NGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTD 591 NGCG+ + + + NHYG++IM+DRA SL G C + ++E GGTEV V F PE D Sbjct: 539 NGCGIGQASEQPNHYGLMIMQDRANSLHGHCSINQKEGGGTEVRVQFTPENNDLD 593 >UniRef50_B4EWG1 Nitrate/nitrite teo-component system, sensor kinase n=8 Tax=Enterobacteriaceae RepID=B4EWG1_PROMH Length = 609 Score = 467 bits (1202), Expect = e-130, Method: Compositional matrix adjust. Identities = 256/582 (43%), Positives = 374/582 (64%), Gaps = 9/582 (1%) Query: 9 LTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSE 68 +++NQ+A+++LL T G+ GMA+S ++ VQG+AHAINK+GSLRMQSYRLL+A+PL + Sbjct: 12 FSIINQIAILMLLFTLFGVVGMAISNHIILSVQGNAHAINKSGSLRMQSYRLLSALPLDD 71 Query: 69 KDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVS 128 K + ++E+E S EL + +Q L YW+ L P L A+ +V Sbjct: 72 KHRDYLQELENDLDSKELRQVLSTSSLQSQYVQLTHYWKETLKPTLSAAKQPNDAKQEVI 131 Query: 129 QFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAM 188 FV+ LD LVS D+ TE +I V + LLL ++ R RLL PW+QL++M Sbjct: 132 FFVSQLDTLVSSIDQLTEQKIRLVAYTQLIFTALTLLLLFGSVWHFRRRLLLPWQQLMSM 191 Query: 189 ASAVSHRDFTQRANI-SGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQI 247 A+++ H DF+ R +E+A LG ALN MS EL+ Y+ LEQRV EKT L+ KN++ Sbjct: 192 ANSIGHGDFSTRFRPRPHHDEIATLGIALNTMSEELSTLYSELEQRVIEKTHDLQQKNKV 251 Query: 248 LSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDM- 306 LS+L+ ++++LHS+APLC RL +L LQ++ +++R+Y+ + E + P Sbjct: 252 LSYLYHSSQQLHSQAPLCARLRQILAELQHIIPDSYLQIRLYEDNQHTLFNEISLAPSSR 311 Query: 307 --TCDDKGCQLCPRG---VLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQL 361 C C+ C P+ +R L W L D +YG+ + LP+ L+ +Q L Sbjct: 312 PEYCPTPDCERCNEDANITTPLNNR--LLHWELTDQIHRYGLFVMQLPENSVLTDEQNNL 369 Query: 362 VDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD 421 + L +Q++A LA+++ E+QQQL++M+ER+ IARELHDSIAQSLSC+KMQVS LQMQ + Sbjct: 370 MLLLTKQISAMLAMEQQNEQQQQLLLMDERSAIARELHDSIAQSLSCLKMQVSYLQMQSE 429 Query: 422 ALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVK 481 LP++ ++LL ++R ELN ++ QLRELLTTFRL+LTEPGL ALE + E++ + GF + Sbjct: 430 TLPDNCQKLLKEMREELNVAYRQLRELLTTFRLKLTEPGLLAALENTLNEFNQRLGFAIH 489 Query: 482 LDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV 541 DYQLP + V SHQ+IH++QI REAL+N L+H+ A+ V + N+ V+L + DNG G+ Sbjct: 490 FDYQLPAKCVNSHQSIHVVQIVREALNNILQHANANWAEVALTLNNGIVELQINDNGEGI 549 Query: 542 PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 N + NHYG+IIMR+RA SL G +R R+ GGT+V VTF Sbjct: 550 TPNPEKINHYGLIIMRERANSLNGSYSIRVRKEGGTQVFVTF 591 >UniRef50_B2Q6G3 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B2Q6G3_PROST Length = 586 Score = 460 bits (1184), Expect = e-128, Method: Compositional matrix adjust. Identities = 254/577 (44%), Positives = 376/577 (65%), Gaps = 7/577 (1%) Query: 9 LTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSE 68 +++NQV ++LL +G+ GM +S ++ VQG+AHAINK+GSLRMQSYRLL+ +PL++ Sbjct: 10 FSIINQVIGLMLLIAILGIIGMTISNRMIISVQGNAHAINKSGSLRMQSYRLLSLIPLND 69 Query: 69 KDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVS 128 K + +E S ELT+ + + + L +W L PAL A + +V Sbjct: 70 HTKEYLDILENDLSSLELTQVVKAEDLTEKFSELHTFWLKTLRPALSEANSASDARYEVI 129 Query: 129 QFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAM 188 FV LD+LV D TE +I V + + + LLL+ TI LR ++ PW +LL+M Sbjct: 130 SFVNMLDELVHDIDEKTERKIAYVAMTQMIFIGLVFLLLMVTIWHLRRKIYYPWMKLLSM 189 Query: 189 ASAVSHRDFTQR-ANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQI 247 A A+ +DF+QR N + ++E+ LG LN MS ELA+SY LE RV EKTA L +KN++ Sbjct: 190 AHAIGQKDFSQRYPNNNKQDELNTLGLTLNQMSDELAQSYHQLESRVAEKTADLRNKNRV 249 Query: 248 LSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQP-DM 306 LS+L+Q+N+ LHS PL RL VL L+N+T L+++ L++Y+ +E+ E C D Sbjct: 250 LSYLYQSNQILHSTEPLDLRLQKVLGELKNITSLKNLSLKLYEDSNEKYFHEICCTSNDP 309 Query: 307 TCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLV 366 +D P+ ++ TL W L+D+ +YG++ A + +S +Q LV LV Sbjct: 310 LSEDPS--FIPKDIV---HHPKTLLWELSDNMHRYGVISAEIENNEDISEEQNNLVLMLV 364 Query: 367 EQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPES 426 +Q++ LA++ E+QQQL++M+ER+ IARELHDSIAQSLSC+KMQ+S LQMQ ++LP+ Sbjct: 365 KQISGMLAMEHQIEQQQQLLIMDERSAIARELHDSIAQSLSCLKMQISYLQMQPESLPDK 424 Query: 427 SRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQL 486 ++LLS++R E+N +++QLRELLTTFRL+L EPGL P+LE++ E+S K GF + L+Y + Sbjct: 425 HQQLLSEMRGEINTAYSQLRELLTTFRLKLMEPGLLPSLESTINEFSQKMGFKILLNYHI 484 Query: 487 PPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI 546 P + + HQ+IH++QI REALSN LKH+ A+ VT+ Q+ V +T++DNG G+ Sbjct: 485 PAKSISPHQSIHIIQIIREALSNILKHAHANWAQVTLQQDSGVVTITIEDNGEGIAPTPS 544 Query: 547 RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + NHYG+IIMR+RA SL G+C + R GGT+V VTF Sbjct: 545 KQNHYGLIIMRERALSLNGECEIIPRAQGGTKVQVTF 581 >UniRef50_Q0HUB7 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=2 Tax=Shewanella RepID=Q0HUB7_SHESR Length = 589 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 234/575 (40%), Positives = 350/575 (60%), Gaps = 22/575 (3%) Query: 30 MAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDK------PLI-------KE 76 M +S W+ +QGSAHAI++ GS+RM+SYRLL+ +PL + K P I + Sbjct: 1 MVISSWVSNSLQGSAHAIDEIGSMRMKSYRLLSFLPLENEQKLLLANSPFISKLNIGKNQ 60 Query: 77 MEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQ 136 + + +L ER+ + L YW +L P L+ A+ V FVA LD Sbjct: 61 LNKGEDVVKLKVFLEREDLINDFNDLYQYWNLQLQPTLLSAKTASDARVKVDFFVAKLDN 120 Query: 137 LVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRD 196 LV D TE++++ V VH V LL + +++L+ R+ +PW++LL +A+++S D Sbjct: 121 LVKKIDSNTEVKLKLVSRVHSVFIFLSVLLTIVGVVFLKLRIFRPWQELLRIANSISSGD 180 Query: 197 FTQRA-NISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQAN 255 F+QR +EM +LG A++ MS +L + Y LE+RVQ+KT + +N LSFL++++ Sbjct: 181 FSQRFRERKYHDEMTILGDAMSCMSTQLRKMYDELERRVQQKTLHIREQNLWLSFLYRSS 240 Query: 256 RRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF----TCQPDMTCDDK 311 +LHS A C R P+L L+ L ++LR+Y+ ++ N ++F T +P C D Sbjct: 241 NQLHSSASTCLRYFPILKELEELIPFTSMQLRLYEYNNSNNFEQFKTSNTVRPKY-CADH 299 Query: 312 GCQLC-PRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLT 370 C+LC + L+W L D + +YG+++A + L+ Q QLV TLVEQL+ Sbjct: 300 ECELCLDKSFSQSTLNCKMLEWPLRDQYGEYGVMIAYCLNDQDLTPLQSQLVKTLVEQLS 359 Query: 371 ATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSREL 430 +LAL+ + +QL++M+ERA IARELHDSIAQSLSC+K++VSCLQMQ L L Sbjct: 360 TSLALEYQDYKNKQLMIMDERAVIARELHDSIAQSLSCLKIKVSCLQMQSKNLGAEQLVL 419 Query: 431 LSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRL 490 + ++R ELN++++ LRELLTTFRL+L EPGL PALE++ EE++ K GF ++L YQLPP Sbjct: 420 IQEMRTELNSAYSHLRELLTTFRLKLNEPGLHPALESTIEEFNKKLGFSIELIYQLPPNC 479 Query: 491 VPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN--DNQVKLTVQDNGCGVPENAIRS 548 V SHQAIHL+ I REALSN KH+ A VV + + N +++ ++DNG G+ + + Sbjct: 480 VSSHQAIHLVHIVREALSNIYKHANADCAVVQLDFDPIHNHIQVVIRDNGIGLSGDMTKV 539 Query: 549 NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 NHYG+ IM DRA++L G C + +GG EV + F Sbjct: 540 NHYGISIMNDRAKNLPGKCSIDNHLNGGVEVKILF 574 >UniRef50_A6D1I3 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=1 Tax=Vibrio shilonii AK1 RepID=A6D1I3_9VIBR Length = 583 Score = 339 bits (869), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 183/583 (31%), Positives = 325/583 (55%), Gaps = 19/583 (3%) Query: 9 LTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSE 68 +++ +++ +L+ +I L+GM +S V +QG H +N+ GS+RM Y+ + + S Sbjct: 6 ISITKKISFFILILCSISLSGMFISLITVDNIQGRTHIVNQIGSIRMLIYKSILSTDKSI 65 Query: 69 KDKPLI---KEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSA 125 + + +I K++ + ++ D L Q+ N QN E++ + Sbjct: 66 RSENIIRINKKLNNPNIIEYMIKSGLSDQHGNLLAFFQENIEN---------QNYESIRS 116 Query: 126 DVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQL 185 + +FV +D L+ +R TE I+++ + + ++ + + +++I L +RL +PW + Sbjct: 117 NSDEFVKIIDNLIYKVERNTENNIKSLENIQKAFSIMIIIFGIYSIGNLYSRLFKPWMSI 176 Query: 186 LAMASAVSHRDFTQRANISG-RNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHK 244 L ++ ++ DF+++ + ++EM LG ++N MS + E+Y LE V KT L K Sbjct: 177 LDISRSIKSGDFSKKFIVQKHKDEMNELGDSINLMSESIKETYINLENVVYHKTEDLNRK 236 Query: 245 NQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF---- 300 N+ L FL++A ++ ++ C+ L+P+ L LT + +++ + D + +N Q F Sbjct: 237 NKYLDFLYRACKKFNNEQYSCDMLAPLTQELIELTGIHKVKILINDYQESDNTQIFDFGS 296 Query: 301 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ 360 +PD C + C LC + + + +L DS+ YG ++ + ++ + +Q Sbjct: 297 ISRPDF-CKNLSCNLCFDNEKTFIENLSEITIKLKDSNHDYGKIVISNNIKSCINVENEQ 355 Query: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 L+ E LT +L++ ++ QQL++++ER TIARELHDSIAQSLSC+K+++S LQM Sbjct: 356 LIIAFSELLTQSLSVFYKVQQDQQLLILKERNTIARELHDSIAQSLSCLKIKLSILQMDL 415 Query: 421 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV 480 L E ++ ++R E+N ++ QLRELLTTFRL+L G PALE + +EY+ K G + Sbjct: 416 SNLDEEQISIIGEMREEVNVAYCQLRELLTTFRLRLDGLGFLPALENTVKEYNKKIGTKI 475 Query: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG 540 Y++P + H +IHL+QI RE L+N KH+QAS+V + ++ DN + L + D+GCG Sbjct: 476 NFSYEIPANKISIHHSIHLIQIIRELLNNIYKHAQASDVTLDLSMKDNDISLVILDDGCG 535 Query: 541 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + ++ YG+ I+ DRAQSL G + GTE +TF Sbjct: 536 FSTSQ-ENSRYGLKIIGDRAQSLSGKWDIISSPGKGTEFYLTF 577 >UniRef50_A1U593 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Marinobacter RepID=A1U593_MARAV Length = 618 Score = 334 bits (856), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 213/604 (35%), Positives = 337/604 (55%), Gaps = 32/604 (5%) Query: 11 LVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKD 70 LVN++A+++ + MA + + ++G+A AIN AGSLRM +++L A S D Sbjct: 7 LVNRLAVVIGAIVLTAIVSMATTLAVSNSIEGNATAINLAGSLRMGAFQLAAR---SATD 63 Query: 71 KP---------LIKEMEQTAFSAELTRAAER--DGQLA-QLQGLQDYWRNELIPALMRAQ 118 P I+ E + R+ R D LA Q + ++ W N+L +L Q Sbjct: 64 DPQDSTGTLNQRIEAYEDRLRDPAIIRSIPRTDDHPLAEQYKTVEYSWANQLRQSLESHQ 123 Query: 119 NRETVSAD----VSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWL 174 +SA+ V ++ +D LVS +R TE RI+ + L+ + VF L+++ + L Sbjct: 124 PGAPLSAEMIAAVEEYTGEVDLLVSMLERRTEARIDLLHLIQIISMVFSVLIVLALFLDL 183 Query: 175 RARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRV 234 + R+L+P R+L+ +A+AV +DF+ +AN+ G +E+A LG A + M++ELA +Y LE R Sbjct: 184 KNRILRPLRKLVGIATAVGEQDFSHKANLKGSDELAQLGQAFDQMTSELALTYYELESRA 243 Query: 235 QEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDE 294 ++KT LE + L + A+R L + LC P+L L+ L + I L ++D + Sbjct: 244 RQKTEELEISHAALQVMHSASRGLFANHDLCSGAIPMLQDLEQLLGIGPIRLFLHDKESA 303 Query: 295 ENHQEFTC---QPDMTCDDKGCQLC---PRGV--LPV-GDRGTTLKWRLADSHTQYGILL 345 E + T + C D C C P +P+ + G L + G L Sbjct: 304 EPVEAITTATPKRPFYCRDHHCNACLVTPEVYDEMPLENNDGRRLLLPIRTPGQLLGTLE 363 Query: 346 ATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQS 405 P + L ++L++TL +QL + L++ +QQL + EER IARELHDS+AQS Sbjct: 364 VWYPAEKGLPETSRRLLETLTDQLATAIFLEKQITEEQQLTLAEERTVIARELHDSLAQS 423 Query: 406 LSCMKMQVSCLQ---MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLR 462 LS +KMQV+ L+ + G+ P ++L ++ LN+++ QLRELL TFRL+L P L Sbjct: 424 LSYLKMQVTRLRRLNIDGEQKPIHD-DILDELSTGLNSAYRQLRELLATFRLKLDTPDLA 482 Query: 463 PALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT 522 AL + +E+S + G PV +Y LPP+ + ++ IH LQI RE L+NA+KH+ A+++ V Sbjct: 483 TALRKTIDEFSERLGKPVAFEYNLPPQTLSPNEEIHTLQIIREGLANAVKHADATDIAVK 542 Query: 523 VAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVT 582 V + QV+ ++QDNG G+P NHYG+IIM+DRA++L G VR R+ GG EV +T Sbjct: 543 VVFDSPQVRASIQDNGKGLPGGDQPVNHYGLIIMQDRARTLGGKVNVRNRDEGGVEVALT 602 Query: 583 FIPE 586 F+P+ Sbjct: 603 FVPK 606 >UniRef50_B4S080 Signal transduction histidine kinase, nitrate/nitrite-specific n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S080_ALTMD Length = 588 Score = 295 bits (755), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 192/582 (32%), Positives = 320/582 (54%), Gaps = 31/582 (5%) Query: 30 MAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKD----KPLIKEMEQTAFSAE 85 M + ++ G Q A A+N AGSLRMQ+YR+ + + S D L+ E + T + Sbjct: 1 MFTTVFMSDGAQFDAQAVNVAGSLRMQTYRIHSVMQDSPGDIETINQLVDEFDLTLNTGV 60 Query: 86 LT--RAAERDGQLAQLQGLQDYWRNELIPALMRAQ-----NRETVSADV-SQFVAGLDQL 137 L +A +G +A+ + NE + L++ N T S +V ++ V ++ L Sbjct: 61 LVNQQALWDNGDIAKHHAIVANNWNEQVKQLIQTNLASPSNSNTSSLEVFNKLVEDIELL 120 Query: 138 VSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLL-QPWRQLLAMASAVSHRD 196 V + + E+ I + LV +A+F L+L+ + + R + QP +L ++A + D Sbjct: 121 VVAYQKYAEINIANIRLVQS-LALFSTLILIAIAMMIVHRHIEQPLSKLTSVARQIGQGD 179 Query: 197 FTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANR 256 FT RA +G+ E+A+L +N MS L S + LE++++ KT L NQ L L+Q +R Sbjct: 180 FTARAEETGKGELALLARTINKMSGSLYRSKSQLEEQIKRKTRKLTRSNQSLELLFQVSR 239 Query: 257 RLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQ----PDMTCDDKG 312 RL+ P P+LN L ++T ++D++L + ++ PD C + Sbjct: 240 RLNEVEPGSADFQPLLNKLADVTGVKDLDLCIMTAQGTGPYEHLMSSEKTIPD-KCQQQL 298 Query: 313 CQLCPR--GVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLT 370 C C + P + + + D H YG+L+ +L +G L Q QL + + EQ+ Sbjct: 299 CHDCTEHDSLFPPVNGQMKYQLNIGDQH--YGVLVVSLDEGSILEDWQHQLFEAIAEQVA 356 Query: 371 ATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ--MQGDALPESSR 428 L++ E+++++ +M ER IARELHDS+AQ+LS +K+QV+ LQ Q ++ E Sbjct: 357 NGLSMKHQNEQRRRIALMNERTVIARELHDSLAQALSYLKIQVTRLQRLQQKESAQEQID 416 Query: 429 ELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEY---SAKFGFPVKLDYQ 485 +++ +++N L A++++LRELLTTFRL+L G++ ALE + + S F F L+Y Sbjct: 417 QVIDELKNGLGAAYSELRELLTTFRLKLDGQGIKAALEQTISQLQNRSDDFNFT--LNYH 474 Query: 486 LPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND-NQVKLTVQDNGCGVPEN 544 + + IHLLQIAREA NA HSQ + +++ N ++V LTV+DNG G+PE+ Sbjct: 475 VSNIPFTPQEEIHLLQIAREATQNAFYHSQGFNIDISITSNSLSEVILTVKDNGIGIPED 534 Query: 545 AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 + NHYG+ IM++R+++L G+ V+R + GT V+ +FIPE Sbjct: 535 PNKLNHYGLAIMKERSRNLDGELSVKRNDERGTTVMFSFIPE 576 >UniRef50_A4VHY8 Two-component sensor NarX n=3 Tax=Pseudomonas RepID=A4VHY8_PSEU5 Length = 658 Score = 291 bits (746), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 206/590 (34%), Positives = 316/590 (53%), Gaps = 26/590 (4%) Query: 15 VALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLI 74 VA +V++ L M S +L ++G A AIN+AGSLRMQ+YRL A + L+ Sbjct: 40 VAFVVII--GFSLVSMLASLYLADALEGDAEAINQAGSLRMQAYRL--AFTAEHGPQALL 95 Query: 75 KE----MEQTAFSAELTRAAERDGQ--LAQLQG-LQDYWRNELIPALMRAQNR-ETVSAD 126 +E +E+T SA L A R G L L G + +W+ + P L R + + Sbjct: 96 EERIDILERTLRSASLRSALHRHGDTPLPGLHGGVLQHWQERMRPLLDAQPPRLDDYRRE 155 Query: 127 VSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIW-LRARLLQPWRQL 185 +FV+ LD V +E ++ V+ + +F+ +L+ F +I+ L L P R L Sbjct: 156 APEFVSELDVFVRTLQEASEGKL-GVIRALQAGTLFIIVLIAFVLIYGLHNNLATPLRSL 214 Query: 186 LAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKN 245 MA + DF+ R I G E+++L LN MS ELA YA +EQ+V +KTA L N Sbjct: 215 TKMARDIGKGDFSGRVEIPGDTELSLLARTLNQMSQELAGLYAEMEQKVDDKTAALTRSN 274 Query: 246 QILSFLWQANRRLHSRAPLCE-RLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTC-- 302 L L+ + R L+S+ + +L +Q + I L + + + +H T Sbjct: 275 ATLQLLFNSARMLYSQPDDPSLMMGSLLTKVQEVLDTGPISLCLNRSAEAGSHTAMTSSD 334 Query: 303 -QPDMTCDDKGCQLCP---RGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQ 358 QP C C++CP G LP G+ T + R G L P G L Q Sbjct: 335 LQPPDYCKLPQCEVCPVNQSGRLPSGEELVTFELR--SGQDDLGSLRVAHPAGEPLESWQ 392 Query: 359 QQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ- 417 L+ TL + A+L+L + ++Q +L +MEERA IARELHDS+AQ+LS K+Q++ L+ Sbjct: 393 TLLLTTLADLFAASLSLAQLGQKQARLALMEERAVIARELHDSLAQALSAQKLQLARLKR 452 Query: 418 -MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKF 476 MQ ++ + + QI LN+++ QLRELLTTFR+++ EPGL+PAL+A+ EE+ A Sbjct: 453 LMQKESGQAQLDDSVQQIDRGLNSAYRQLRELLTTFRIKVNEPGLKPALQATIEEFGANS 512 Query: 477 GFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND-NQVKLTVQ 535 G ++ D+QL + ++ +H LQI REALSN +KH++A + + Q+ + + ++ Sbjct: 513 GLHIESDFQLDHCPLTPNEEVHCLQIIREALSNVVKHAEAEHCWLRLTQDGIGTINVEIE 572 Query: 536 DNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 D+G G+ R+ HYG+II+R+RA SL G + R GGT V + F P Sbjct: 573 DDGIGIRPEEQRTGHYGLIILRERANSLNGSISIGLRPGGGTRVHLRFPP 622 >UniRef50_Q5QWJ9 Nitrate/nitrite sensor histidine kinase n=1 Tax=Idiomarina loihiensis RepID=Q5QWJ9_IDILO Length = 598 Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 198/594 (33%), Positives = 319/594 (53%), Gaps = 36/594 (6%) Query: 15 VALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLI 74 +ALIV++++A L+ WL++ + A IN AGS RM++Y+ A+ LS K Sbjct: 15 LALIVIVASASSLSAF----WLLEKSEQDAELINVAGSHRMKAYKF--ALQLSSGKKVQA 68 Query: 75 KEM--------EQTAFSAELTRAAERDGQLAQLQGLQDYWR--NELIPALMRAQNRETVS 124 E EQ +A QLA+ + W+ + I A+ + S Sbjct: 69 SETAQEIDTLWEQPLLHRHFVKAGGSIQQLAK--DARTEWQRVHSEIAEQDFARFSQQQS 126 Query: 125 ADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQ 184 + +V LD LV +E R+ETV + + F+ + F + L+ ++ QP R Sbjct: 127 NAIDNYVNQLDTLVGQLQEHSERRMETVRSSLALASFFIVAIFFFLLTVLKRKINQPLRH 186 Query: 185 LLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHK 244 LLA++ + DFT ++ I +E+ L +N MS ++ Y LE+RV+++T L K Sbjct: 187 LLAVSKRLGQGDFTAKSKIDNEDEIGQLSRTMNKMSETVSYFYGGLERRVEQQTQELSRK 246 Query: 245 NQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQP 304 N++LSFL+ R + + V+ L + + DIEL + +E N QP Sbjct: 247 NKVLSFLYDTARSIIVHSYDYNNYQQVIEKLYEIGEVNDIELCLL--TEEGNRPFLQLQP 304 Query: 305 DMT----CDDKGCQLCPR---GVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHD 357 + C+ C C + G + D+ ++ L YG+L+ QG+ L+ Sbjct: 305 RPSSHEPCEAGDCATCLKAGPGASVIEDK-LVYRFVLKREDQNYGVLIVRCEQGQPLATW 363 Query: 358 QQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ 417 QQQL+ + +QL + +L +E+ ++L +M ER IARELHDS+AQ+LS +K+QV+ L Sbjct: 364 QQQLMSSTADQLALSQSLKSEEEQVRRLALMHERTVIARELHDSLAQALSYLKIQVTRLH 423 Query: 418 MQGDALPESSRELLSQIRNE----LNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYS 473 + ++ R + + NE LN+++ QLRELLTTFRL++ GL AL+ + ++ + Sbjct: 424 ---KGIEKNDRATIDDVSNELREGLNSAYRQLRELLTTFRLKVDGSGLYSALQTTVKQLT 480 Query: 474 AKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQ-VKL 532 + V LDY+L + H+ IHLLQI REA NA+ HSQ SEV ++++Q Q V+L Sbjct: 481 EQSNMVVHLDYRLNNIPLVPHEEIHLLQIIREASQNAVNHSQGSEVHISLSQPSGQDVEL 540 Query: 533 TVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 + D+G G+PENA + NHYG+ IM++R+++L G+ ++ R ESGGTEV TF P+ Sbjct: 541 KITDDGIGLPENAEKVNHYGLAIMQERSRNLGGEIKISRLESGGTEVCFTFTPD 594 >UniRef50_Q8VUK2 Putative nitrate/nitrite sensor protein n=1 Tax=Halomonas halodenitrificans RepID=Q8VUK2_PARHA Length = 644 Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 197/605 (32%), Positives = 320/605 (52%), Gaps = 29/605 (4%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAV----- 64 +LV ++ +L +A+ L +AV+ + +G A AIN AGSLRM ++++L A+ Sbjct: 7 SLVARIVASLLAISAMALVSIAVTMTVANDSRGDAAAINMAGSLRMNTHQILTALLRYDL 66 Query: 65 -PLSEKDK---PLIKEMEQTAFSAELTRAAERDGQLA---QLQGLQDYWRNELIPALMRA 117 P + D L++ E S ELT A A Q + L W ++++PA+ RA Sbjct: 67 HPDAAHDDGVAALVERFETRLASPELTDALPDAADHALRRQHRELLSRWTHDILPAINRA 126 Query: 118 ------QNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTI 171 Q + A V +D LV+ +R +E +I+ ++++ + +++ + Sbjct: 127 RAADDRQGPDPAPA-FEALVGDIDALVTLLERNSESKIQLLIILQFLFLALTVVVVAIAL 185 Query: 172 IWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLE 231 +R L+ P R LL +A + R+F R + G +E+A+LG +NM+ ELA SYA LE Sbjct: 186 YDIRHNLVTPLRHLLVLAREAARRNFGYRTHFRGNDELALLGRTFDNMAEELATSYAELE 245 Query: 232 QRVQEKTAGLEHKNQILSFLWQANRRLHSRA-PLCERLSPVLNGLQNLTLLRDIELRVYD 290 K A LE N+ + + +R L+ LC +P+L L+ L + I L + D Sbjct: 246 AHASLKQAELERSNRAMQVMHDGSRALYGGGNDLCASAAPMLRQLEQLLDVGPIRLSLND 305 Query: 291 T-DDEENHQEFTCQPDMT--CDDKGCQLCPRGVLPV----GDRGTTLKWRLADSHTQYGI 343 DD + T P C D C C P+ +G L ++ G Sbjct: 306 PHDDRQIPILATHSPHRPEYCRDHECHACLIDPQPLKLEQAQQGECLLLPVSVGELMLGT 365 Query: 344 LLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIA 403 L + + LS ++L++ L +QL + L R E QQQ+ +M ER IARELHDS+A Sbjct: 366 LEVWHSRSQPLSDSVRRLLNALADQLATAVYLQRRIEEQQQVTLMNERTIIARELHDSLA 425 Query: 404 QSLSCMKMQVSCLQ--MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGL 461 QSLS +KMQV+ L+ Q +A E + ++R L++++ QLRELLTTFRL+L PGL Sbjct: 426 QSLSYLKMQVARLERMQQKEAPRERQAAVFDELRTGLDSAYRQLRELLTTFRLKLEGPGL 485 Query: 462 RPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVV 521 AL + E+ + G+PV L+ +PP L+ ++ IH+LQ+ REAL+N LKH+ A + Sbjct: 486 ASALHQTAREFGKRLGYPVILEVDVPPHLLNPNEEIHVLQVVREALANVLKHANAHWAAI 545 Query: 522 TVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 T+ + ++ + ++D+G G+ +++ HYG++IMRDRA +L G+ + R GGT + + Sbjct: 546 TINFQEARLHVVIEDDGIGLDDDSSPPMHYGLVIMRDRADTLGGEMTLHNRPGGGTRLAL 605 Query: 582 TFIPE 586 F P+ Sbjct: 606 VFTPQ 610 >UniRef50_Q0A9X9 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A9X9_ALHEH Length = 644 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 204/613 (33%), Positives = 310/613 (50%), Gaps = 30/613 (4%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 + R L P + AL+V ++T IG GM ++ + Q A AIN AGSLRMQSYR+ Sbjct: 6 LYNRLLHPTLAGSLFALLVGVAT-IGFLGMLHGAFVAKTAQHDAAAINVAGSLRMQSYRI 64 Query: 61 LAAVPLSEKDKPL---------IKEMEQTAFSAELTR---AAERDGQLAQLQGLQDYWRN 108 A L + P + E+ S EL R A D + + W Sbjct: 65 --ATTLLDDQGPQAGAKTLDAEVAAFERRLHSPELLRPIPANPDDPVREAWEEVHRQWTT 122 Query: 109 ELIPALMRAQNRET---VSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMAL 165 EL P L+ + + V +FV +D LV+ E RI V + ++ Sbjct: 123 ELKPLLVDGSSAGSPVRYLDQVDRFVGTVDNLVTAAQSAAEARIHNSQSVRVLAMALLSG 182 Query: 166 LLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAE 225 L+++ + L RL+ P +QL +A + DF RA +E+ M N M+ L + Sbjct: 183 LVLYGLYRLHMRLVLPVQQLNYVAGRLMKGDFEARARYLPNDELGMYARTFNRMADTLTD 242 Query: 226 SYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIE 285 L RV EKTA L +N L ++ A+R L + A L +L+ L+ +T L + Sbjct: 243 MQRSLAHRVSEKTAELRRRNSALELVYNASRDLSAGALESSNLKAMLDTLERVTGLGPLS 302 Query: 286 LRVYDTDDEENHQEFTCQPD---MTCDDKGCQLCPRGVLPVGDRGTTLKWRLA----DSH 338 + + +++ + + + C C+ C V+P G LA D + Sbjct: 303 ICLAQPGADKSFETLSTSAESRPARCSAPDCKGC-MNVVPRHGGGVVCPGMLALPLEDRN 361 Query: 339 TQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIAREL 398 +YG+L G Q L +T+ + A A +R + + ++++MEERA IAREL Sbjct: 362 VRYGLLQVEYTPGDQPRGWQLHLAETVASHIAAACARERELDAEHRIVLMEERAVIAREL 421 Query: 399 HDSIAQSLSCMKMQVSCLQ--MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQL 456 HDS+AQ+LS MK+QV+ LQ M+ + P +LS++R+ LN+++ QLRELLTTFRL + Sbjct: 422 HDSLAQALSYMKIQVARLQGLMRKEHEPAQLEAILSELRDGLNSAYEQLRELLTTFRLGM 481 Query: 457 TEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQA 516 PGL AL + +E+S + P++LDY+L + +++ IHLLQIAREAL+N ++HSQA Sbjct: 482 DSPGLESALRKAVKEFSERGDIPIRLDYRLSHWPLNANEEIHLLQIAREALANVVRHSQA 541 Query: 517 SEVVVTVAQNDNQ-VKLTVQDNGCGVPENAIR-SNHYGMIIMRDRAQSLRGDCRVRRRES 574 + V VA N V L V DNG G+ + +HYG IM++RA+ L G R+ R Sbjct: 542 TRADVVVAPGSNHDVVLEVLDNGVGLAAVSEEPGHHYGTAIMQERAEGLGGMLRLGNRAG 601 Query: 575 GGTEVVVTFIPEK 587 GG V++TF PE Sbjct: 602 GGMRVMLTFRPES 614 >UniRef50_Q3SJ17 Periplasmic Sensor Signal Transduction Histidine Kinase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJ17_THIDA Length = 644 Score = 268 bits (685), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 207/617 (33%), Positives = 314/617 (50%), Gaps = 56/617 (9%) Query: 23 TAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLA-------------AVPLSE- 68 T + + M+ S + + +QGS AIN AGSLRMQS+R+ A A L E Sbjct: 37 TVLAVTSMSTSWMVAETIQGSGEAINLAGSLRMQSWRMAAIYQRLQSDGATEDAEDLGEA 96 Query: 69 --------KDKPLIKEM--EQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQ 118 K P++ + ++T + R E D + GLQ + PA R Sbjct: 97 IARFEADLKAAPILAVLPSDETTPLWHVYRQVENDWRTVVKPGLQ------VTPAAGRPA 150 Query: 119 NRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVM---AVFMALLLVFTIIWLR 175 R +V D+ FVA ++ LV + E +I LV RV+ AV +L+V I+L Sbjct: 151 -RGSVLDDIPAFVAHINDLVKQIEDAAEAKI----LVMRVILGAAVIATMLVVALAIYLV 205 Query: 176 ARLL-QPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRV 234 +L P R LL +A + + R +++G +E+ LG A N+M+ +L+ Y LE RV Sbjct: 206 NNILVYPLRGLLGLADQIGQGNLAVRNDLTGEDEIGRLGQAFNHMAEDLSMLYQNLEARV 265 Query: 235 QEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVL-NGLQN-LTLLRDIELRVYDTD 292 +EKTA L N+ L L+ + RL++ P+ R +L L+N L L + V Sbjct: 266 EEKTAELTIANRSLELLYHSIARLYN-GPIAPRTYEILLKDLENVLGLGHGLACLVEGDG 324 Query: 293 DEENHQEFTCQPDMT-----CDDKGCQLC----PRGVLPVGDRGTTLKWRLADSHTQYGI 343 + P + C C C V P+GD L L D+ YG+ Sbjct: 325 ATRGRVIASTLPPLPEGADPCSVMSCAECLARPALAVHPLGDGRRVLSLPLNDTEQLYGV 384 Query: 344 LLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIA 403 L +P G+ L Q QL++ L + + R E+ ++L +++ERA +AR+LHDS+A Sbjct: 385 LQLEMPPGKELVQWQSQLLEALSRHIGIAIGTARRTEQSRRLSLLDERAALARDLHDSLA 444 Query: 404 QSLSCMKMQVSCLQ--MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGL 461 QSL+ MK+QVS L+ ++G + ++L+++R LN+++ QLRELLTTFRL++ GL Sbjct: 445 QSLAYMKIQVSRLKPLVEGSGAGSEAGDVLAELREGLNSAYRQLRELLTTFRLRIEGEGL 504 Query: 462 RPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVV 521 AL+ + E+S + G P+ L L + ++ IH LQI REALSN L H+QA + V Sbjct: 505 GAALQTTVTEFSNRGGIPITLVVHLAGCKLTPNEEIHALQIVREALSNVLNHAQARQAEV 564 Query: 522 TVAQN-DNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVV 580 +V+ N D V TV D+G G+ A R++HYGM IM +RA++L G V + GT V Sbjct: 565 SVSCNSDGSVSATVTDDGIGIHGTA-RAHHYGMTIMEERAKNLGGRLSVENLAARGTRVA 623 Query: 581 VTFIPEKTFTDVQGDTH 597 + F+P D G H Sbjct: 624 LHFVPSTRRED-NGTIH 639 >UniRef50_Q2SF45 Signal transduction histidine kinase, nitrate/nitrite-specific n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF45_HAHCH Length = 620 Score = 261 bits (667), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 177/602 (29%), Positives = 319/602 (52%), Gaps = 27/602 (4%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAV----- 64 +L+ ++ +++ ++ + M S ++ + + A A+N AGSLRMQSYR+ A + Sbjct: 8 SLIFRMGALMIAMVSLAMITMLASFFISESAEKDAEAVNIAGSLRMQSYRMQARLLTLDT 67 Query: 65 PLSEKDKPLIKEMEQTAFSAELTRAAERDGQLA---QLQGLQDYWRNELIPAL-MRAQNR 120 P S+ L ++ + + L A +D Q +++ W N++ + A N Sbjct: 68 PPSDFVAALTRQFAERIENPVLVAEAMKDDSSELHRQFMQVRESWENDVSGFIATYAHNP 127 Query: 121 ETVSAD-----VSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLV-FTIIWL 174 + AD + +FV +D LV + E RIE + L+ ++ A+F+ LV F+++ L Sbjct: 128 DRRVADQLGEKIDKFVDEIDNLVQLYQIRAEDRIENLRLI-QISALFLTFALVSFSLLIL 186 Query: 175 RARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRV 234 + P R L A ++ DF+ R + +E+ +L N MS L+E Y LE RV Sbjct: 187 HHHVELPLRSLTQNARKIARGDFSDRLEVKNDDELGLLAETFNQMSDALSEMYESLETRV 246 Query: 235 QEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDD- 293 + KT L+ N L+FL+ R + + L L ++T + +EL + + Sbjct: 247 KNKTQALKRSNDSLNFLYHLAREVSEKTHENIDFQAWLEELTSITAVGGVELCLKTPEAV 306 Query: 294 ---EENHQEFTCQPDMTCDDKGCQLC--PRGVLPVGDRGTTLKWRLADSHTQYGILLATL 348 E ++ + +C + C+ C + + + +++ L QYG+++ TL Sbjct: 307 IPYEHIRNDYMTELPSSCQRQECEKCMVEKAQVCRDNDEVQVRYPLIKEGVQYGVIVCTL 366 Query: 349 PQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSC 408 ++L Q QL+ + +Q+ L+L ++++++ +M ER IARELHDS+AQSLS Sbjct: 367 RNSQYLESWQHQLLQSFSDQVAVALSLKNQGDQERRVSLMNERNVIARELHDSLAQSLSY 426 Query: 409 MKMQVSCLQ--MQGDALPESSRE-LLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPAL 465 +K+QV+ L +Q + + + + ++++ + +++ QLRELLTTFRL ++E GL A+ Sbjct: 427 LKIQVARLTRALQSKQVEDEQIDGITAELKEGITSAYRQLRELLTTFRLSISEKGLHAAI 486 Query: 466 EASCEEYSAK-FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVA 524 + E+ + + + LDY++ ++ IHLLQI REAL NA++HSQ + V V++ Sbjct: 487 LHTVEQLTEQSTNVKIVLDYRVEDIPFSPNEEIHLLQITREALQNAVRHSQGNLVTVSLH 546 Query: 525 QN-DNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + +V L + DNG G+PE+ + NHYG+ IMR+R ++L G+ ++R GGT V+ +F Sbjct: 547 SDPKKKVTLAIIDNGVGIPEDPEKLNHYGLAIMRERTRNLHGELAIQRIPEGGTAVLFSF 606 Query: 584 IP 585 P Sbjct: 607 TP 608 >UniRef50_B7UUR7 Two-component sensor NarX n=7 Tax=Gammaproteobacteria RepID=B7UUR7_PSEA8 Length = 622 Score = 257 bits (657), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 197/593 (33%), Positives = 296/593 (49%), Gaps = 30/593 (5%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEK 69 +LV + + L ++ L GM + A IN AGSLRM +YR+ A P E Sbjct: 30 SLVVRFGCYLTLLVSLALIGMFSALLFADYTHQDAAVINHAGSLRMLTYRV-ALEPSLEG 88 Query: 70 DKPLIKEMEQTAFSAELTRAAER---DGQLAQLQGLQDYWRNELIPALMRAQNRETVS-A 125 + L+ + + S ++ R +R D + QL EL L R R A Sbjct: 89 RQALLGTLGERLDSGDIRRLLQRQDADDPIRQLH-------QELREGLARLDPRALPGRA 141 Query: 126 DVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIW-LRARLLQPWRQ 184 + +V +D+ V E R + + V + +F++LL+VF ++ L ++ P R+ Sbjct: 142 VLDAYVGDIDRFVGILQAKAERRSQLLSTVQ-GLCLFLSLLVVFVTLYDLSYHVIGPLRE 200 Query: 185 LLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHK 244 L + A + + R SG +E+A LG N M+ EL Y LE+RV++KT L Sbjct: 201 LTSTARRLGRGELDARVTYSGEDELAQLGERFNQMAGELKSIYGDLEERVEDKTRALSQS 260 Query: 245 NQILSFLWQANRRLHSRAPLCERLSPVLNGLQN--------LTLLRDIELRVYDT-DDEE 295 +Q L L+ + RRL L P+LN L+ L L +D R Y + E Sbjct: 261 HQRLELLYASARRLGENPYDSRTLQPLLNQLEKVLDAGRVTLCLNKDGVERAYSSLTTTE 320 Query: 296 NHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLS 355 +F Q D + C + P L L+ + ++G L GR L Sbjct: 321 RPADFCLQGDCGSCREQASACDQ---PSSLAQPLLMQPLSIAGHRFGELFIESRSGR-LE 376 Query: 356 HDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSC 415 + QQQL++T + + T AL QE++ +L + ER TIARELHDS+AQSLS +K+QVS Sbjct: 377 NWQQQLIETFCDNIARTFALSLQQEQESRLALFAERGTIARELHDSLAQSLSYLKIQVSR 436 Query: 416 LQ--MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYS 473 L ++ +A E + L ++R LN ++ QLRELLTTFRL L EP L AL + E+ Sbjct: 437 LGTLLKREAPAEKIEDTLDELREGLNGAYRQLRELLTTFRLSLDEPSLEAALGNAVAEFG 496 Query: 474 AKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTV-AQNDNQVKL 532 + ++LD +L + ++ IH+LQI REALSN ++HSQA V + +Q D QV + Sbjct: 497 ERGEVTIELDNRLQHVPLSPNEEIHVLQIVREALSNVVRHSQAQRAWVRLSSQADGQVSI 556 Query: 533 TVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 V+D+G G RS HYG+ IM++R Q+L R R GT V+ +F+P Sbjct: 557 AVEDDGVGFDPQQNRSGHYGLTIMQERGQTLGSQLRFEARAPHGTRVLFSFVP 609 >UniRef50_Q5P3L3 Nitrate/nitrite TWO-component sensor NARX n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P3L3_AZOSE Length = 648 Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 197/598 (32%), Positives = 300/598 (50%), Gaps = 44/598 (7%) Query: 25 IGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKD--------KPLIKE 76 I L G+ S +V+ VQ S A+N AG LR ++R + + D I Sbjct: 42 ISLVGIGASVAIVETVQDSGSAVNAAGGLRRLAHRAASVALAAALDGRTGHADVAAAIGA 101 Query: 77 MEQTAFSAELTRAAER--DGQLAQL-QGLQDYWRNELIPALMRAQNR----------ETV 123 E A L + ER D +A + +G+ W L P L+ A R E + Sbjct: 102 FEAELGHATLEKVLEREPDSVVASIYRGIHRDWYVNLKPRLLGAPERASESPDVLFYENL 161 Query: 124 SADVSQFVAGLDQLVSGFDRTTE-----MRIETVVLVHRVMAVFMALLLVFTIIWLRARL 178 ADV F A +D LV+ +R TE +RI V + VM V +A L V +R R+ Sbjct: 162 LADVDAFTAQIDALVAVLERETETGLEQLRITLAVALGMVMIVMIAALCV-----IRRRV 216 Query: 179 LQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKT 238 +P +L A A+ ++ DF + +GR+E+ +G+A N M+ EL+ Y LEQRV++KT Sbjct: 217 FRPLTELHACAARIAGGDFRAHSRYTGRDELGRVGSAFNAMADELSTVYRDLEQRVEQKT 276 Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ 298 A L N+ L L+ RL+ E L L+ + L+ + V Sbjct: 277 ADLTRSNRALELLYHVIARLYHAPASPETYVETLKDLEQVLGLKGSFVCVQPKHGGVATV 336 Query: 299 EFTCQ---PDMTCDDKGCQLCPRGVLPVG----DRGTTLKWRLADSHTQYGIL-LATLPQ 350 T P + ++ C CP +P D L D+ YG++ LA LP Sbjct: 337 LSTTMGDCPSRSGSEEECTHCPGRAMPWSYRREDGFDVFLVPLRDADHLYGMMRLALLP- 395 Query: 351 GRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMK 410 G L Q LV+ + + L + ER++ L + EER+ IARELHDS+AQSLS MK Sbjct: 396 GERLRAWQHTLVEAVSRHMGIALGISHQSERERLLALQEERSIIARELHDSLAQSLSYMK 455 Query: 411 MQVSCLQ--MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEAS 468 +Q S L +Q + + ++L+ ++ +NA++ QLRELL+TFRLQ+ E L ++ Sbjct: 456 IQASLLSSALQRPERRDDASDILADMKGGINAAYRQLRELLSTFRLQM-EGDFARLLGST 514 Query: 469 CEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDN 528 EEY+ + G P+ L+ +L R + +Q IH+L I REALSNA +H++AS + V + + + Sbjct: 515 VEEYAGRSGMPIDLEIRLGGRHLNPNQEIHVLHIIREALSNATRHARASSIRVGLFGHPD 574 Query: 529 QVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 V++ ++D+G G+ A +HYG+ IM +RA+ L G + R GGT V V F P Sbjct: 575 GVRVIIEDDGKGIRAAAATEPHHYGLAIMGERARGLGGVLEIVPRPDGGTRVAVRFDP 632 >UniRef50_C7RBW7 Histidine kinase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBW7_KANKD Length = 584 Score = 255 bits (651), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 188/595 (31%), Positives = 299/595 (50%), Gaps = 42/595 (7%) Query: 15 VALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLI 74 +A+IV A+ LA + S ++ + + G A IN AGSLRMQS RL A+ + + ++ Sbjct: 1 MAIIV----ALALASLITSMFVSESLDGDAAQINVAGSLRMQSIRLSRALTAEQNNLDIL 56 Query: 75 KEMEQTAFSAELTR-----------AAERDGQLAQLQG-LQDYWRNELIPALMRAQNRET 122 T E R A + ++ + L+ W ET Sbjct: 57 NATTATDEIREFERRLSILLSHGLIANSGNQKIVDIHKVLEQQWFEIKTQVNTNPARFET 116 Query: 123 VSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIW-LRARLLQP 181 + + QFV +D+LVS +E +I + ++ A+F+ LL F ++ + ++QP Sbjct: 117 DYSLIDQFVGTIDRLVSILQSESEKKIRVLRMIQG-SALFLTLLTAFIALYRINRSIVQP 175 Query: 182 WRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGL 241 L+A A S +F R + +E+ +LGT N MS L + LE++VQEKT L Sbjct: 176 MNNLVAAAKEASKGNFNVRVSDISNDEIGLLGTTFNEMSTRLQIIHNHLEEKVQEKTTKL 235 Query: 242 EHKNQILSFLWQANRRL---HSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ 298 E N+ L L+Q + L +SR L+ V + + ++ ++ +V ++ HQ Sbjct: 236 ERSNKSLELLYQTSHNLVRANSRRDFENLLAQVEQTIGDGQVILCLDQKVQNS-----HQ 290 Query: 299 EF-TCQPDM--TCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGR--H 353 Q ++ CD C C + + YG L +G+ Sbjct: 291 RIPISQHELPKNCDQIHCSQCKIS------NNIRHSFHIHKQDKDYGSLQYFSNKGKPEQ 344 Query: 354 LSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQV 413 H+ L+ + + + ++LD+ + ++ L++MEERA IARELHDS+AQSLS +K+Q Sbjct: 345 WVHN---LLQAIADNIAVAISLDQKRAQENLLLLMEERAVIARELHDSLAQSLSFLKLQT 401 Query: 414 SCLQMQGDALPESS--RELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEE 471 S L Q D E + + +++ LN ++ QLRELLTTFRLQ+ EP L AL+ + E Sbjct: 402 SLLSRQLDKNLERNTIENTIGDLKDGLNNAYRQLRELLTTFRLQIEEPSLESALKGTVAE 461 Query: 472 YSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVK 531 +S K G+ V+LDY + + + S+Q IH LQI REALSN +HSQAS+ V ++ +V Sbjct: 462 FSTKCGYEVELDYSITNQTLTSNQQIHALQIIREALSNVQRHSQASKAWVKLSIQGGKVH 521 Query: 532 LTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 + V DNG G+P+ HYG+ IM +RA SL + +R+ GT V +T P+ Sbjct: 522 VEVIDNGIGIPDEMPEGTHYGLSIMNERAASLNANIDIRKAPPQGTIVEMTLEPQ 576 >UniRef50_C4K985 Histidine kinase n=1 Tax=Thauera sp. MZ1T RepID=C4K985_THASP Length = 637 Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 196/613 (31%), Positives = 302/613 (49%), Gaps = 48/613 (7%) Query: 9 LTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYR--------- 59 + L+ VAL+ + T IGLAGM+ S +V + S AI A +LR + R Sbjct: 14 IMLLVSVALVAM--TLIGLAGMSASFVVVDRSRDSVQAIAVASTLRGHTQRIANLIAIDA 71 Query: 60 LLAAVPLSEKDKPLIKEMEQTAFSAELTR-AAERDGQL--AQLQGLQDYWRNELIPALMR 116 L + +SE+ + + ++E+ A L R E G+L A +G+Q W + P + Sbjct: 72 LKGRIGVSERTRAAMADIERELQQAALRRFVDEAPGELFAATYRGVQAGWERSVRPRIEA 131 Query: 117 --------AQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLV 168 A+ ET+ A V FV +D LV+ + E RI+ + + + A +++ Sbjct: 132 LAGPVPPDAREVETLLAGVDDFVGQVDSLVAVLGQENERRIDELRRILALAAAVTLGVVL 191 Query: 169 FTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYA 228 I+ L+ LL+P LL A ++ DF R +G +E+ +G+A N M+ ELA Y Sbjct: 192 VVIVLLQRALLRPLGGLLDAARRIAGGDFGVRVRYTGEDELGQVGSAFNLMADELARHYH 251 Query: 229 VLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRD----I 284 +LE RV EKTA L+ N+ L L+ A RL+ + L + + L I Sbjct: 252 LLELRVTEKTAELQRSNRSLELLYHAIARLYQAPSAPDAYEATLRDIDRVAGLEGSFVCI 311 Query: 285 ELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRG--------TTLKWRLAD 336 E R C + C C G G T L++ L D Sbjct: 312 EPRPGAPAAVIASSMGPCPDRAERGEDACAACR-----AGSEGQALALLSPTLLRFPLRD 366 Query: 337 SHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIAR 396 +G+L +L G L Q+QLV+ L + L R E+++ L + EER+ IAR Sbjct: 367 REHHHGMLRLSLSDGARLEDWQRQLVEALSRHIGMALGAARRTEQERLLALQEERSVIAR 426 Query: 397 ELHDSIAQSLSCMKMQVSCLQ--MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL 454 ELHDS+AQ+LS MK+QVS LQ + A + +L+ +R ++A++ QLRELL +FRL Sbjct: 427 ELHDSLAQALSYMKIQVSLLQRALADPARTAEAEPILADLREGISAAYRQLRELLVSFRL 486 Query: 455 QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHS 514 L+ L +E + EY + G V+L +L + +Q +H+LQI REALSN ++H+ Sbjct: 487 GLSAD-LATLMEDAAREYGTRGGLEVELAVELGACQLSPNQEVHVLQIVREALSNMVRHA 545 Query: 515 QASEVVVTV-AQNDNQVKLTVQDNGCGV---PENAIRSNHYGMIIMRDRAQSLRGDCRVR 570 A V + D +V L V+D+GCG+ P +A NH+G+ IMR+RA+S+ G+ + Sbjct: 546 SARHAWVALRGGADGEVLLEVRDDGCGIGAPPADA--RNHHGLAIMRERARSMGGEIDIG 603 Query: 571 RRESGGTEVVVTF 583 GT V V F Sbjct: 604 PALPSGTRVCVRF 616 >UniRef50_A7JYP2 Histidine kinase domain protein n=7 Tax=Vibrio RepID=A7JYP2_VIBSE Length = 584 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 173/590 (29%), Positives = 293/590 (49%), Gaps = 50/590 (8%) Query: 10 TLVNQVALIVLLSTAI-GLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSE 68 T+ + + LI+LLS A G A ++ L A A+N AGS+RMQSYRL + + Sbjct: 18 TIASAMLLILLLSVATTGFAIFTLASSL-----NDAEAVNVAGSMRMQSYRLANDIQVKS 72 Query: 69 KD-KPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWR-----NELIPALMRAQNRET 122 D I E + +S + +A + + DY+R +EL +++R N Sbjct: 73 VDYSSHIDAFEHSIYSPSM-KALQHWSVPEDIT--HDYYRLIMRWHEL-KSVLRGDNPAE 128 Query: 123 VSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPW 182 V+ FV +D+ V +E ++ + + + + + +F + ++R +++P Sbjct: 129 YQLLVAGFVKQIDEFVFKLQSFSEQKLINLAWIGGLGLGGILCVSMFVVHFVRLEVVRPL 188 Query: 183 RQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLE 242 R L+ + + +R F ++S NEM +L N M+ +L + Y LEQ V EKT L+ Sbjct: 189 RALVFASEQIKNRSFNISLDVSSDNEMGILTRTFNRMATDLGKLYRGLEQAVDEKTRKLQ 248 Query: 243 HKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEE---NHQE 299 H NQ L L+ +++ L + + +L + +L ++ ++L + + E Sbjct: 249 HANQSLEVLYDSSKELTASRINQDNFQAILQHIASLEGIKAVKLEIEQLGEPSWILMEGE 308 Query: 300 FTCQPDMTCDDKGCQLCPRGVLPV-GDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQ 358 C CD+ C L + G+ L W+ A LP Sbjct: 309 ECCHD---CDED----CHSKALTLDGEHLGYLYWK------------AGLPCP------N 343 Query: 359 QQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQM 418 + L+D V+ L+ + +R Q + +Q+++MEERATIARELHDS+AQ+LS +K+QV+ L+ Sbjct: 344 EALIDNFVQILSRAVYYNRAQRQAEQILLMEERATIARELHDSLAQALSYLKIQVALLKR 403 Query: 419 QGDALPES-----SRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYS 473 LP+ + ++++++ L+A++ QLRELLTTFRL + E AL+ E + Sbjct: 404 SVKNLPDEKAIAQANQVIAELDTGLSAAYTQLRELLTTFRLTIKEGSFGQALQDMVETLN 463 Query: 474 AKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLT 533 + + L +L + +HQ +HLLQ+ REA NA+KH+QA + + ND +V +T Sbjct: 464 EQTVADITLKNRLSSTELDAHQQVHLLQLIREAAINAIKHAQADNIHIQCLDNDGKVTVT 523 Query: 534 VQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 V D+G G + NHYGM IM++RA L D + + G V + F Sbjct: 524 VTDDGIGFEHQDEKLNHYGMSIMQERAARLHADLHIEASINKGCTVKLEF 573 >UniRef50_A8FUN8 Two-component sensor NarX n=3 Tax=Shewanella RepID=A8FUN8_SHESH Length = 591 Score = 224 bits (572), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 165/599 (27%), Positives = 290/599 (48%), Gaps = 55/599 (9%) Query: 7 SPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPL 66 S +LV + + +GL M S + + + G A IN+AGS+RMQ+ R+ A + Sbjct: 26 SSSSLVASAGQFMAIIITLGLFSMISSILVAESLSGDAERINRAGSMRMQAIRVSRANLI 85 Query: 67 SEKDKPLIKEMEQTAFSAELTR------AAERDGQ--LAQLQGLQDYWRNELIPALMRAQ 118 + I E F +L+ A+ D +AQ Q + W ++ Sbjct: 86 DQDGSRPILSQEIQVFENKLSHLFFGGIASTIDDPEVIAQHQKILSSWD------AIKQS 139 Query: 119 NRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARL 178 + T D +F +D+LV+ +E ++ + L+ + + ++ + L L Sbjct: 140 PQTTSVEDFDRFTIKIDKLVNLLQMESEKKLSLLRLIQGITLFSILIVSALVLFKLNRSL 199 Query: 179 LQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKT 238 + P +QL+ +AS +F + + NE+ +L + +MS +L +Y E RV +KT Sbjct: 200 IIPLKQLVRVASEAGKGNFNIKVDHIADNELGLLSRTIAHMSKQLENTYQEFEDRVDKKT 259 Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ 298 L NQ L L++A L + Y D++ Q Sbjct: 260 QELTQSNQSLEVLYRAASNLSNYE--------------------------YHQIDQKIIQ 293 Query: 299 EFTCQPDMTCDDKGCQLCPRGVLPV---GDRGTTLKWRLADSHTQ--------YGILLAT 347 E + LC + + + + T+ + D H +G ++ Sbjct: 294 ELV--QVLGYGKVSIVLCEKSINNLTFYKAKTNTIDHQYMDVHQFVLEKRGRFFGDIVWQ 351 Query: 348 LPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLS 407 +P+ Q+QL+ + + + + L++ + + +L++ EERA IARELHDS+AQSLS Sbjct: 352 VPKHETPEDWQKQLLQAMADIVATAIELEQKKNTENRLLIAEERAVIARELHDSLAQSLS 411 Query: 408 CMKMQVSCL--QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPAL 465 +K+Q+S L +MQ E E ++ I+ LN ++ QLRELLTTFRL+L +P L AL Sbjct: 412 FLKVQMSLLTRKMQKGLPEEQVNETINDIKQGLNHAYLQLRELLTTFRLKLDDPSLENAL 471 Query: 466 EASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ 525 + + E++ K ++L++++P + ++Q IH+LQI RE+LSN +H++AS V + + Sbjct: 472 QGTVAEFAEKCQHAIELNFEIPQNYLTANQEIHVLQIIRESLSNVHRHAEASLAGVNLIK 531 Query: 526 NDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 D+++KL + DNG G+P N + H+G+ IM++RA+SL GT+V++ FI Sbjct: 532 EDDKIKLAIWDNGRGLPSNLEQQGHFGLGIMKERAKSLNSVLAFEPNSPSGTKVLLEFI 590 >UniRef50_A8GHJ7 Integral membrane sensor signal transduction histidine kinase n=3 Tax=Enterobacteriaceae RepID=A8GHJ7_SERP5 Length = 560 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 184/604 (30%), Positives = 310/604 (51%), Gaps = 64/604 (10%) Query: 1 MLKRCLSPLTLVNQVALIVLLST-AIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYR 59 ++KR ++ +L + IV+LS + GLA V+ L A A+N AGSLRMQSYR Sbjct: 2 LVKRSVTS-SLAKALFCIVILSVLSTGLALTTVADSL-----RDAEAVNIAGSLRMQSYR 55 Query: 60 LLAAV--PLSEKDK-----------PLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYW 106 L + P E ++ P ++++++ AE+ R+ L+ LQ W Sbjct: 56 LAYDLTGPAPELEQHLLQYRQSLQAPALQKLDRFYVPAEV-----REKYLS----LQHAW 106 Query: 107 RNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALL 166 + + ++A A+++ +V +D V R +E+++ V + + + + L Sbjct: 107 QP--LAQQIQAGQSADYQANIAGYVNQIDHFVLALQRYSELKLTIVAAISVLGFIAIIGL 164 Query: 167 LVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRA-NISGRNEMAMLGTALNNMSAELAE 225 ++F I ++R +++ P + L+ + V RDF + + NE+ +L A MS +LA+ Sbjct: 165 VLFCIRFMRRQVVAPLKHLVDASQRVQQRDFNHPPLDTALPNELGVLSQAFTAMSGDLAK 224 Query: 226 SYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIE 285 Y LEQ+VQEKT L+ N+ L L+ ++ L+ R + +L+ ++ L I Sbjct: 225 LYESLEQKVQEKTQRLQQANKTLEVLYNCSQALNVRQIDQQAFEKILHIVRQSEDLHCIR 284 Query: 286 LRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILL 345 L V D+ E Q + +P T + + +G P+G+ L W+ + Sbjct: 285 LNVADSLSE--WQLRSGRPSPTLAWQSLTII-QGDKPLGE----LSWQHKEQ-------- 329 Query: 346 ATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQS 405 P HL + ++ L+ + +R Q++ Q ++MEERATIARELHDS+AQ+ Sbjct: 330 ---PPHPHL-------MQSVANMLSRGVYFNRAQKQHMQFLLMEERATIARELHDSLAQA 379 Query: 406 LSCMKMQVSCLQMQ-GDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPA 464 LS +++Q++ L+ D+ PE ++E++S L ++ QLRELLTTFRL + E L A Sbjct: 380 LSFLRIQLTLLRRTLADSTPE-AQEIISDFDQALADAYRQLRELLTTFRLNIQEADLNTA 438 Query: 465 LEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVV--- 521 L ++L +L + + + Q +H LQI REA+ NA+KH+QA E+V+ Sbjct: 439 LHQLLAPLKVLTDARIQLHCRLSSQALNAQQQVHALQIVREAVLNAIKHAQAQEIVIRCE 498 Query: 522 TVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 A+ DN + ++ D+GCG+ HYG+ IM +RA L G R++R E GTEV + Sbjct: 499 MTAEGDNSI--SIADDGCGIASLNEPEGHYGLTIMSERAARLGGTLRIQRGEPDGTEVRL 556 Query: 582 TFIP 585 TF P Sbjct: 557 TFPP 560 >UniRef50_Q9F0Y0 Nitrate/nitrite sensor protein n=1 Tax=Pseudomonas fluorescens RepID=Q9F0Y0_PSEFL Length = 599 Score = 221 bits (564), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 178/592 (30%), Positives = 286/592 (48%), Gaps = 26/592 (4%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL---LAAVPL 66 +L + L V+L + LA +G + QG A AIN AGS+RM++Y L LAA Sbjct: 8 SLPARAGLAVILIAILALASSLSAGLIAWFSQGDAAAINTAGSVRMETYHLSWKLAAG-- 65 Query: 67 SEKDKPLIKEMEQTAFSAELTRAAERDGQLAQL----QGLQDYWRNELIPALMRAQNRET 122 + D P I Q + RA DG L + L W L PA+ R + Sbjct: 66 ANDDIPAIIASLQQRLDSPALRAVLEDGPETSLHKSYRDLMQRWNQTLRPAIERG-DSAF 124 Query: 123 VSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPW 182 + S FV LDQ V+ R +E + + + ++L+ + L+ ++ P Sbjct: 125 FQSSASSFVEQLDQFVTLLQRQSEHKQGWQQAIQGIALFSTMIILLIGLYELQYGVVTPL 184 Query: 183 RQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLE 242 ++L+ +F R N +E+ L T+ N M+ + +S+ LE +VQ+KT L+ Sbjct: 185 QELVDATQRFRRGEFQVRVNHQSEDELGQLATSFNTMAETIEQSHRTLEAQVQQKTLNLQ 244 Query: 243 HKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQN------LTLLRDIELRVYDTDDEEN 296 N L L+Q++R L +R E L ++ Q LTL +L+ Sbjct: 245 QANAALELLYQSSRSLATRQANAEGLDELIRRFQQRLPGLRLTLCLQGQLQAPAKHLLAL 304 Query: 297 HQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSH 356 H + Q C C C + + + +++ T+ G L A G Sbjct: 305 HGAASRQ---VCASSDCASCHKH-----NAARPQAFSISNQGTELGELKAHFVDGHAAQP 356 Query: 357 DQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL 416 + L+ L + +L+L R +E+ +L++++ER IARELHDS+AQ+LS MK+QVS + Sbjct: 357 WETALIQALANLIGTSLSLKRQREQDHRLLLLDERTIIARELHDSLAQALSYMKLQVSRM 416 Query: 417 Q--MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSA 474 Q M+ ++ + ++R LN ++ QLRELLTTFRLQ+ + GL L+ + EE+S Sbjct: 417 QTLMRRGEPVQTLETVTGELREGLNNAYRQLRELLTTFRLQIRDDGLVQELKDTAEEFSN 476 Query: 475 KFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTV 534 + F V L + + + IH+LQI REALSN L+H+ A + + Q V+L++ Sbjct: 477 RGDFQVHLFIDTLAFELSASEQIHILQITREALSNCLRHAHAENAWLELRQEGETVRLSI 536 Query: 535 QDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 +D+G G + H+G+ IM +RA+SL G ++ R GT + F PE Sbjct: 537 EDDGRGFSGEVDQCEHHGLNIMNERARSLHGQLQIHSRPPHGTRIQAHFQPE 588 >UniRef50_C5S0V3 Nitrate/nitrite sensor protein NarQ n=6 Tax=Gammaproteobacteria RepID=C5S0V3_9PAST Length = 572 Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 173/581 (29%), Positives = 290/581 (49%), Gaps = 57/581 (9%) Query: 25 IGLAGMAVSGW--LVQGV--------QGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPL- 73 IGL + G+ L+ G+ + A IN +GSLR QSYR + + ++ L Sbjct: 16 IGLYFFIIIGFATLISGISLGIMWSNKSDASLINVSGSLRYQSYRFWYEMNHAPENIELR 75 Query: 74 IKEMEQTAFSAELTRAAERDGQL-----AQLQGLQDYWRNELIPALMRAQNRETVSADVS 128 ++E + S EL +A L A+ Q L+D W E + +R Q+ E+ + + Sbjct: 76 LEEYRASLHSPEL-QALNSSYLLPKEVKARYQRLKDVW--EEMALYIRHQDHESYLSRIE 132 Query: 129 QFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAM 188 +V +D VS + E +++ + V + + + L + I + R R+++ QL+ Sbjct: 133 HYVKEIDAFVSALQKFAEFKLKIAISVIAISMLLIIALAYYGIWYTRKRIIKHLDQLVLA 192 Query: 189 ASAVSHRDFTQRA-NISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQI 247 + + DF + I+ NE+ +L M +EL + Y LE +V +KT L N+ Sbjct: 193 SQQIQQEDFDHVSLAINEPNELGVLSKTFTQMVSELKKLYTSLEDKVADKTRRLTAVNRS 252 Query: 248 LSFLWQANRRLHS----RAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQ 303 + L+ ++ L S R L + L VL Q L+ I L VY D + T Sbjct: 253 MMVLYHCSQILTSKPVSRTLLLQVLERVLANEQ----LKGIALEVYGAD----YWNITID 304 Query: 304 PDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVD 363 D+ + Q + ++ L+W+ + LL P R L+ Sbjct: 305 TDLLSE----QWQQYEIAIENEKIAMLRWKSS--------LLC--PDER--------LLQ 342 Query: 364 TLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDAL 423 ++ E + ++ + ++ ++QQQLI+MEER+ IARELHDS+AQSL+ K+Q+ LQ G+ Sbjct: 343 SVAEMIGRSIYVVQNHKQQQQLILMEERSIIARELHDSLAQSLTFFKIQIRLLQRNGEIE 402 Query: 424 P--ESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVK 481 E + +L+ + LN +++QLRELL+TFRL + E L ALE + A+ + Sbjct: 403 QDWEKQKAILNDLEKALNDAYSQLRELLSTFRLTIEEANLTSALERMLDTLRARTSAQIS 462 Query: 482 LDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN-DNQVKLTVQDNGCG 540 L +LP + + + +H+LQI REA+ NA+KH+ ASE+ V N D + L ++DNG G Sbjct: 463 LTCKLPSLMFSAQEQVHVLQIVREAVINAIKHADASEIEVIAETNADGEHCLMIRDNGKG 522 Query: 541 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 + + HYG+ IM++RA L G+ +++ R GG V+V Sbjct: 523 IETDIEPEGHYGLTIMKERATELHGEFKIQNRSEGGALVMV 563 >UniRef50_Q5E3J3 Sensory histidine kinase in two-component regulatory system with NarP (NarL) n=3 Tax=Aliivibrio RepID=Q5E3J3_VIBF1 Length = 563 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 165/595 (27%), Positives = 298/595 (50%), Gaps = 55/595 (9%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 +L R ++ + L+ + +I +++T++ L ++ S A A+N AGSLRMQSYRL Sbjct: 8 ILTRTIAQVMLL--IVMISIITTSLALITLSSS-------LKDAEAVNIAGSLRMQSYRL 58 Query: 61 LAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRN------ELIPAL 114 A + LI+ +++ + S E D Q ++DY+ + L P+L Sbjct: 59 --AYDIETNSPELIEHLDKFSQSIESPSFKSLD-QWFVPDDIEDYYEDIRLQWLSLQPSL 115 Query: 115 MRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWL 174 + + N++ VS FV +D V +E +++ + L+ + + +F I + Sbjct: 116 L-SDNKQIYLNKVSLFVDEIDHFVFRLQEFSERKLQLLSLIGALGLSLIVFSSIFIIFFT 174 Query: 175 RARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRV 234 + +++ P L+A + A++ +++ + +++ NE+ LG A N+M+ ++ SY LE RV Sbjct: 175 QRKIVSPLHHLVAASHAMTKGNYSVQVDLNSDNELGQLGNAFNHMTRQVDLSYRELESRV 234 Query: 235 QEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDE 294 ++KT L N+ L L+Q +++L + + +L+ N+ + I R+ ++ Sbjct: 235 EDKTKKLSQANRSLMILYQCSQQLSASQLDEQAFKNILDTFTNIEGI--ISARLIVEEES 292 Query: 295 ENHQEFTC-QPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILL--ATLPQG 351 E T +PD + +LC G Q G LL +LP Sbjct: 293 GGDWEITSGEPDESPWSLQ-ELCIDG-------------------EQLGYLLWQESLPCP 332 Query: 352 RHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKM 411 Q+L+ + L + ++ Q++ QLI++EER+TIARELHDS+AQSLS +K+ Sbjct: 333 ------DQKLIINISNILARGIFYNQAQKQTHQLILLEERSTIARELHDSLAQSLSYLKI 386 Query: 412 QVSCLQMQ---GDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEAS 468 Q + L+ Q D + S+ L ++ L ++++QLR LL TFRL + + AL+ Sbjct: 387 QTTLLKRQLEKCDCINTSTT--LVELDEGLKSAYSQLRGLLNTFRLTINKAHFGEALQEI 444 Query: 469 CEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDN 528 +++ + L+ +LP + + Q +HLLQ+ REA NA+KHS+A +++T Q Sbjct: 445 MTTLASQTKINIHLNNELPSLPINAQQHVHLLQLIREATLNAIKHSKADNIIITCFQEGE 504 Query: 529 QVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 Q + ++D+G G + NHYG+ IM++RA + G + G V V F Sbjct: 505 QGCINIEDDGVGFDPTEEKINHYGLRIMQERANCVHGKLSITSEIDNGCTVNVMF 559 >UniRef50_A6FC55 Hypothetical nitrate/nitrite sensor protein NarQ n=1 Tax=Moritella sp. PE36 RepID=A6FC55_9GAMM Length = 572 Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 150/554 (27%), Positives = 274/554 (49%), Gaps = 53/554 (9%) Query: 47 INKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAER-------DGQLAQ- 98 INKAG+LRMQSY++ A LS + L+++ F+ L +L Q Sbjct: 48 INKAGALRMQSYQI--AYNLSRDESELMRQGHIDTFNQSLAHIKNNIVDNWDISSKLKQE 105 Query: 99 LQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRV 158 ++ W+ + ++ + N E V +FV+ +D V +E +++ + L+ + Sbjct: 106 FIIVETQWQKQ--SDILHSDNPEQFLLYVDEFVSEIDTFVQNLQNHSEYKVKVITLIKGL 163 Query: 159 MAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNN 218 + + + TI ++ ++L+P +Q+ A ++ + +F + NE+ L + +++ Sbjct: 164 GIGLIFAVCIITIRLMQVQVLKPLQQIFAASNRIRKGEFDVSFDFFYENEIGSLASNISH 223 Query: 219 MSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNL 278 M+ +L + Y+ LEQ+V KT L+ ++FL+ +++LH + L L + L Sbjct: 224 MANDLNQLYSTLEQQVDAKTKQLKEAKDKINFLYTTSQKLHVTHLNADMLEQTLQSVSEL 283 Query: 279 TLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSH 338 L L + ++ E T + D+ G++ LK L + Sbjct: 284 NGLSFYNLILTGSEVE------TIYLNAGADN-------------GEQTIDLKLELEEQS 324 Query: 339 TQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQ------QQLIVMEERA 392 TL + ++DQ+ L + + R Q R Q+ ++MEERA Sbjct: 325 ------FGTLTVLKREANDQEHL-------RSYCRIISRAQHRSQSNLEAQRSLLMEERA 371 Query: 393 TIARELHDSIAQSLSCMKMQVSCLQ--MQGDALPESSRELLSQIRNELNASWAQLRELLT 450 IARELHDS+AQ+LS +K+QV+ L+ ++ + ++ E++ +I L S+ QLRELL Sbjct: 372 VIARELHDSLAQALSYLKIQVALLKRHLKNQEVTPTTNEIVEEIDVNLRVSYTQLRELLN 431 Query: 451 TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNA 510 TFRL L + L A+ + + + L Y+L L +Q IH+LQI REA+ N+ Sbjct: 432 TFRLTLDDANLSEAISIMLAQLRQRTKSKIHLSYELEEHLFKPNQHIHILQIIREAVLNS 491 Query: 511 LKHSQASEVVVTVAQNDN-QVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRV 569 +KH+ ++E+++ N N +++++ D+G G+P + +SNHYG+ IM +RA L + Sbjct: 492 IKHANSNEIMIDCGTNKNGTIEVSISDDGDGIPADPTKSNHYGLTIMDERASKLGAKLEI 551 Query: 570 RRRESGGTEVVVTF 583 + GT V++TF Sbjct: 552 KNNIIKGTSVLLTF 565 >UniRef50_A4BGQ5 Signal transduction histidine kinase, nitrate/nitrite-specific n=1 Tax=Reinekea blandensis MED297 RepID=A4BGQ5_9GAMM Length = 562 Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 178/616 (28%), Positives = 304/616 (49%), Gaps = 97/616 (15%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSG----WLVQGVQGSAHAINKAGSLRMQ 56 MLK P+ + + LI L + A AVSG W+ + G A A+N +GSLRMQ Sbjct: 1 MLKFARYPVASLLIIGLITLAALA------AVSGLYTLWMTTVLSGDAKAVNLSGSLRMQ 54 Query: 57 SYRLLAAVPLSEKDKPL--IKEMEQTAFSAELTRAAERDGQL--------AQLQGLQDYW 106 SYR+ L E+D P I + T F LT AA + GQ+ A ++ + Sbjct: 55 SYRI---AYLLEQDAPQEHIASLLDT-FEERLTSAALK-GQIPSDHPHLTAAFSTVEQRF 109 Query: 107 RNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALL 166 A+ + E +V FV +D +V+ + +E +++ + +++ ++LL Sbjct: 110 EQMHTAAI---ETPEIYLQEVDAFVEDIDTMVAQLESWSENKVQNL-REQQILITLLSLL 165 Query: 167 --LVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELA 224 ++F II R R++ P ++L+ + D + R + GR+E L + LN M+ E++ Sbjct: 166 AAILFAIIINR-RVVLPLQRLIRTVHRIGRGDRSARVDFQGRDEFGRLASTLNRMADEIS 224 Query: 225 ESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDI 284 + + LE +QE+TA L N+IL FL+ ++RL + P ++T L+ Sbjct: 225 QVHGSLESTIQEQTAELSRNNRILEFLFTLSQRLSTEKP-------------DITALKHQ 271 Query: 285 ---ELRVYDTDDEEN-HQE-FTCQPD---MTCD-DKGCQLCPRGVLPVGDRGTTLKWRLA 335 ELR+ + N HQ+ + P + CD D+ +C + R W Sbjct: 272 SVEELRLICPEHSINWHQQMYETSPQGYVVRCDADQSYLICEQ-------RNGLTAW--- 321 Query: 336 DSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIA 395 Q+QL+ T+ + ++ + + ++ ++ ER++IA Sbjct: 322 ----------------------QKQLLQTVSDLFDNAISRMGAYDHENRIALLNERSSIA 359 Query: 396 RELHDSIAQSLSCMKMQVSCL----QMQGDALPESSRELLSQIRNELNASWAQLRELLTT 451 RELHDS+AQ LS +K+QV L + Q D E+ ++ ++R+ LN+S+ +LRELL T Sbjct: 360 RELHDSLAQQLSYLKIQVVRLVKLRERQADE--ETLNSIIDELRDGLNSSYRKLRELLVT 417 Query: 452 FRLQLTEPGLRPALEASCEEY---SAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS 508 FR QL EPGL P+++A+ ++ S + ++ P L PS Q IH + + REA++ Sbjct: 418 FRSQLDEPGLLPSVKAAIDDVNRMSPNCQIHLYIEDNWPETLTPS-QEIHCMHVIREAIT 476 Query: 509 NALKHSQASEVVVTVAQ-NDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDC 567 N +KH++A VV++ + N +++T+ D+G G E + HYG+ IM +RA + G+ Sbjct: 477 NVVKHAKAENAVVSMKRLPSNTLQVTINDDGIGFGETLTKPMHYGLDIMAERAIRIGGNI 536 Query: 568 RVRRRESGGTEVVVTF 583 + GG V +TF Sbjct: 537 DYKNLNHGGAGVTLTF 552 >UniRef50_Q2C653 Hypothetical nitrate/nitrite sensor protein NarQ n=2 Tax=Photobacterium RepID=Q2C653_9GAMM Length = 563 Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 165/598 (27%), Positives = 285/598 (47%), Gaps = 86/598 (14%) Query: 15 VALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPL- 73 + +I +++TA+ L + S Q AIN AGSLRMQSYRL V E PL Sbjct: 21 ILIISIVTTALALTTLVSS-------QNDVEAINIAGSLRMQSYRLAFDV---ETKSPLL 70 Query: 74 ---IKEMEQTAFSAELTRAAERDGQLAQLQGLQDYW---------------RNELIPALM 115 I++ E + +SA + +GL YW R E + ++ Sbjct: 71 SAHIEQFEHSLYSAPM-------------KGL-SYWLISSEIQQHYNHIVLRWEDLHPIL 116 Query: 116 RAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLR 175 N V+ FV ++ V+ +++E++++ + ++ + + L++ +TI + R Sbjct: 117 ERDNNTVFIQHVAPFVHRINTFVAELQKSSELKLQRLAIIGVIGVSLIFLIVFYTIRYTR 176 Query: 176 ARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQ 235 +++ P L+ V ++F + NE+ +L + MS++L + Y LE+ V Sbjct: 177 QQIVAPLNDLVDACKQVKRKNFRLDLLNNSNNELGILAHTFSKMSSDLEQLYQGLERSVN 236 Query: 236 EKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEE 295 EKT L H N+ L L+ +++L + +LT RV T+ E Sbjct: 237 EKTHRLRHANESLQVLYNCSQQL---------------SVSHLT-------RVQFTNMLE 274 Query: 296 NHQEFTCQPDMTCDDK--GCQLCPRGVLPVGDRGTTLKWRLADSHTQY------GILLAT 347 M D G +L P G + A H QY G L+ Sbjct: 275 T---------MIAIDGLIGAKLIIEE--PNGSTSNIKVGQQAGQHWQYNELYIDGELMGQ 323 Query: 348 LPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLS 407 L L + L++ + + L + +R Q++ + L++MEERATIARELHDS+AQSLS Sbjct: 324 LWWQYSLPCPDKALINNISQILARAIYYNRAQKQAEYLLLMEERATIARELHDSLAQSLS 383 Query: 408 CMKMQVSCL--QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPAL 465 +K+Q++ L ++ +A E++ + + I L+ ++ QLRELL+TFRL + + AL Sbjct: 384 YLKIQLALLKRELNQNAQNENTHQAVYDIEAGLSNAYTQLRELLSTFRLAIKDANFGEAL 443 Query: 466 EASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ 525 E + + +D Q+ + +H +HLLQI REA+ NA+KH+ A E+ V Q Sbjct: 444 NQMLEPLEEQTDALLIIDNQISSMALDAHNQVHLLQIIREAVLNAIKHADADEITVNCQQ 503 Query: 526 NDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + +++T+ D+G G + +HYG+ IM++RA L+G +++ G+ + + F Sbjct: 504 TEQHIQVTIIDDGKGFDIKDSKRDHYGLNIMQERASRLQGKLKIQSGIDQGSAICLRF 561 >UniRef50_P27896 Nitrate/nitrite sensor protein narQ n=113 Tax=Enterobacteriaceae RepID=NARQ_ECOLI Length = 566 Score = 201 bits (510), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 173/588 (29%), Positives = 279/588 (47%), Gaps = 69/588 (11%) Query: 15 VALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL----LAAVPLSEKD 70 + L+ +LST I L +A S A AIN AGSLRMQSYRL + P Sbjct: 18 IVLLSILSTGIALLTLASS-------LRDAEAINIAGSLRMQSYRLGYDLQSGSPQLNAH 70 Query: 71 KPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRET------VS 124 + L ++ + L + + L W + NR + Sbjct: 71 RQLFQQALHSPVLTNLNVWYVPEAVKTRYAHLNANW--------LEMNNRLSKGDLPWYQ 122 Query: 125 ADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQ 184 A+++ +V +D V E ++ VV + + + L+ FT+ +R +++ P Q Sbjct: 123 ANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIGIFTLVFFTLRRIRHQVVAPLNQ 182 Query: 185 LLAMASAVSHRDF-TQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEH 243 L+ + + H F + + + NE+ +L N MS+EL + Y LE V+EKT L Sbjct: 183 LVTASQRIEHGQFDSPPLDTNLPNELGLLAKTFNQMSSELHKLYRSLEASVEEKTRDLHE 242 Query: 244 KNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVY-DTDDEENHQEFTC 302 + L L+Q ++ L++ +L ++RD E Y + + EN + Sbjct: 243 AKRRLEVLYQCSQALNTSQIDVHCFRHILQ------IVRDNEAAEYLELNVGENWRISEG 296 Query: 303 QPDMTCDDKGCQLCPRGVLPVGDRGTT---LKWRLADSHTQYGILLATLPQGRHLSHDQQ 359 QP+ P +LPV + T L W Q H+S + Sbjct: 297 QPNPEL--------PMQILPVTMQETVYGELHW-----------------QNSHVS-SSE 330 Query: 360 QLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ 419 L++++ L L ++ Q+ QQL++MEERATIARELHDS+AQ LS +++Q++ L+ Sbjct: 331 PLLNSVSSMLGRGLYFNQAQKHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLK-- 388 Query: 420 GDALPE---SSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKF 476 ++PE +++ +++ LN ++ QLRELLTTFRL L + L AL + + Sbjct: 389 -RSIPEDNATAQSIMADFSQALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQT 447 Query: 477 GFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT-VAQNDNQVKLTVQ 535 + LD +LP + + +HLLQI REA+ NA+KH+ ASE+ V+ V D + ++ Sbjct: 448 SAKLTLDCRLPTLALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDGNHTVYIR 507 Query: 536 DNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 DNG G+ E HYG+ IMR+RA+ L G + GGT V ++F Sbjct: 508 DNGIGIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPSGGGTLVSISF 555 >UniRef50_B8EB80 Histidine kinase n=20 Tax=Shewanella RepID=B8EB80_SHEB2 Length = 611 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 173/576 (30%), Positives = 271/576 (47%), Gaps = 70/576 (12%) Query: 42 GSAHAINKAGSLRMQSYRLL-AAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLA--- 97 G A AIN +GSLRMQSYRL+ A S+ + I E E T +S L + D + Sbjct: 42 GDAKAINASGSLRMQSYRLMFYANSGSDAAQDKITEFENTLYSDTLKPS---DSWFSPRK 98 Query: 98 ---QLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVL 154 Q Q + D W ++ + +N A + FV +D LV + ++ ++ Sbjct: 99 IADQYQLVIDKWL--VMKYYIEQENSRDYVASLKDFVDTIDLLVLEMEHHAAFKLR-LLA 155 Query: 155 VHRVMAVFMALLLVFTII-WLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLG 213 +++ + + L++ F + + + +++ P ++L+ A+ +S +F + E+ L Sbjct: 156 ASQILGLSVMLIIAFVAVRFTKKKVVIPLQKLMESANTISKGNFEIEMPETEYIELTALT 215 Query: 214 TALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLN 273 AL + ELA Y LE +V EKT L N L+FL+ L++ + L LN Sbjct: 216 HALQKTAKELAMLYGDLESQVAEKTLALTRANNELAFLYDNLLTLNANKLDYKALKAALN 275 Query: 274 ---GLQNLTLLRDI------ELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVG 324 G ++L LR I EL V + D G P Sbjct: 276 QLKGYESLDYLRLIIQYPEQELEVIEAD--------------------------GGWPEV 309 Query: 325 DRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQ 384 + +T ++ L G L Q +++ L + LT ++ + E++QQ Sbjct: 310 TQNST-RFPLQFEQANLGYLELIADQTPNIA-----LFNNFAIMLTRSIVIHNATEQRQQ 363 Query: 385 LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRE-----LLSQIRNELN 439 L +MEER IARELHDS+ Q LS +K+Q+S L+ L S R L++I ++ Sbjct: 364 LALMEERGVIARELHDSLGQVLSFLKIQISLLRKN---LDHSCRNPTIEAQLTEINEGVS 420 Query: 440 ASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHL 499 ++ QLRELL+TFRL + EP L+ ALEA E+ K + LDY+L P+ + + Q IH+ Sbjct: 421 TAYVQLRELLSTFRLTIKEPDLKSALEAMLEQLRTKTSIKITLDYKLAPQWLEAKQHIHI 480 Query: 500 LQIAREALSNALKHSQASEVVVTVAQND-NQVKLTVQDNGCGVPENAIRSNHYGMIIMRD 558 LQI REA NA+KH++AS + + ++D V + V DNG G+ R H+G+ IM + Sbjct: 481 LQITREATLNAIKHAEASLINIHCYKDDEGMVNINVCDNGIGIGHLKERDQHFGIGIMHE 540 Query: 559 RAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQG 594 RA L G E + F P T QG Sbjct: 541 RASKLSGKVVFSDNE------ISRFKPATATTIEQG 570 >UniRef50_P44604 Sensor protein narQ homolog n=30 Tax=Gammaproteobacteria RepID=NARQ_HAEIN Length = 567 Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 164/579 (28%), Positives = 285/579 (49%), Gaps = 43/579 (7%) Query: 17 LIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKE 76 L ++L A ++ ++++ ++ + A AIN +GSLRMQSYRLL + E+ + + Sbjct: 15 LFIILIVAGVISSLSLA--IMSSNKYDAEAINISGSLRMQSYRLL--YEMQEQPESVETN 70 Query: 77 MEQTAFSAELTRAAERDGQLAQLQGLQDYWRNEL-----IPALMRAQNRETVSADVSQFV 131 + + S + E Q L+ ++N L + R Q+ + S ++ +V Sbjct: 71 LRRYHISLHSSALLEVQNQFFTPNVLKHSYQNILQRWTNMEKYARQQDVKNYSKQLTDYV 130 Query: 132 AGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRAR-LLQPWRQLLAMAS 190 A +D V R +E + V V A+ + LL+V +IW R +++P + + Sbjct: 131 ADVDYFVFELQRFSEQKWILGVSV-LGFAMLLILLMVSYVIWYTNREVVKPLHLMTKASM 189 Query: 191 AVSHRDFTQRA-NISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILS 249 V R F + +NE+ L MS EL + Y+ LE+ V EKT L N+ LS Sbjct: 190 QVQMRQFNHIPLDTRKQNELGTLARVFTQMSTELGQLYSRLEEAVNEKTQKLRQTNRTLS 249 Query: 250 FLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCD 309 L+Q+ + L++ + L+ VLN + L +++ V + H + T + Sbjct: 250 TLYQSAQLLNTNTINDKILNQVLNYIFISDHLNFVKVEVMGAE----HWDIT----LGKQ 301 Query: 310 DKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQL 369 D +L + + L W Q G+ P R ++ L + L Sbjct: 302 DANNELQIETLSVDNEELGVLSW-------QAGL---PCPDPR--------IMQNLAQML 343 Query: 370 TATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRE 429 L ++ +++QL++MEER+ IARELHDS+AQ LS +++Q++ L+ E S+E Sbjct: 344 ARALYFHKNLRQKEQLLLMEERSIIARELHDSLAQVLSFLQIQLTLLKHNLKKEDEQSKE 403 Query: 430 ----LLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQ 485 +++ L+ +AQLRELL TFRL + E L+ AL+ + ++ + ++ Q Sbjct: 404 KSLAIIANFEQALSGGYAQLRELLATFRLTIQEANLQLALKQVIDSLRSQTTMQMNVNCQ 463 Query: 486 LPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN-DNQVKLTVQDNGCGVPEN 544 LP + + Q +H+LQI REA +NA+KHSQ + + ++ N + + ++ V+D+G G+P Sbjct: 464 LPSQSLNPQQLVHVLQIVREATTNAIKHSQGTVIEISARINAEGEYEILVEDDGVGIPNL 523 Query: 545 AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 HYG+ IM +R + L + RRE GGT+V +T Sbjct: 524 EEPEGHYGLNIMAERCRQLNAQLHIHRREQGGTQVKITL 562 >UniRef50_A0KIL7 Nitrate/nitrite sensor histidine kinase NarQ n=2 Tax=Aeromonas RepID=A0KIL7_AERHH Length = 570 Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 174/585 (29%), Positives = 283/585 (48%), Gaps = 56/585 (9%) Query: 15 VALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLI 74 + LI+ +++ I + M + V A AIN +GSLRMQ+YR+ + ++ + Sbjct: 18 MVLILFMASLIAVVAMVTLFYSVP----DAKAINLSGSLRMQAYRMAYEIEQGQQVLSRL 73 Query: 75 KEMEQTAFSAEL-------TRAAERDGQ---LAQLQGLQDYWRNELIPALMRAQNRETVS 124 + EQT +AEL T A+ R L Q Q ++++ N A R + Sbjct: 74 DQFEQTLHAAELQETQRWITPASLRRTYGEVLQQWQVMREHIEN--------ATPRR-YT 124 Query: 125 ADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQ 184 + QFVA +D V+ E ++ + L + + + + FT+ + R +++ P Q Sbjct: 125 DNTEQFVAAIDDFVNQMQYHVEFKVRMLALAEGLGLLSIITIAWFTVRFTRQQVVAPLNQ 184 Query: 185 LLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHK 244 L+ A + ++F NE+ L A M+ EL + Y LE +V+EKTA L+ Sbjct: 185 LVYCARQIQRQEFNLTLPPYCENELGELSGAFVTMADELGKLYRELESKVEEKTAKLQQA 244 Query: 245 NQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQP 304 N LSFL+ ++LH+ APL R +L L+ + I+ + T E N P Sbjct: 245 NDTLSFLYSTAQKLHA-APLSRR--TLLKLLERAAAHQHIDY-IRLTRFEHN-----AMP 295 Query: 305 DMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGIL--LATLPQGRHLSHDQQQLV 362 D KG GD + + L +YG L +++ P L + L Sbjct: 296 DYITGRKGWP---------GDLDAVVSFYLQMDEQEYGRLDVISSHPIDERLMKNFSML- 345 Query: 363 DTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ---MQ 419 L L D+ + Q+L++MEERA IARELHDS+AQ+LS +K+Q + L+ + Sbjct: 346 ------LAQVLHKDQTLLQHQRLLLMEERAVIARELHDSLAQALSYLKIQSTLLKRFFAK 399 Query: 420 GDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFP 479 GD + + + QI L +++ QLRELL TFRL + + L A++ E+ + Sbjct: 400 GDTV--KAEAAMQQIDEGLGSAYTQLRELLGTFRLSIGDANLGEAIKVMLEQLKPQTQAD 457 Query: 480 VKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ-NDNQVKLTVQDNG 538 ++L Y L + + Q IH+LQ+ REA+ NA+KH+ A + V+ D +++ + D+G Sbjct: 458 IRLHYGLADTDLEAGQHIHILQLIREAVLNAIKHASAQVIDVSCETLADGNIQVQISDDG 517 Query: 539 CGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 G+ + NHYG+ IM +RA L G + R GT V +TF Sbjct: 518 VGIGIASSAVNHYGLSIMNERASKLHGLLTISERPPRGTCVHLTF 562 >UniRef50_Q7N5B4 Similar to nitrate/nitrite sensor protein NarX n=2 Tax=Photorhabdus RepID=Q7N5B4_PHOLL Length = 410 Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 113/351 (32%), Positives = 189/351 (53%), Gaps = 18/351 (5%) Query: 233 RVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTD 292 R + + L+ KN L FL Q++ +L + L E+L + + L L + ++ Y + Sbjct: 75 RYKAEINALKQKNSYLDFLCQSHFKLQNCKLLPEKLQEIFSHLNRLIPFCEAKIIFYPS- 133 Query: 293 DEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGR 352 QE+ + C P D ++W L D+ YG L + Sbjct: 134 ----QQEYFFRNPHQC-------------PYFDMPLIMRWNLDDNIDSYGTLWIKTHRNS 176 Query: 353 HLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQ 412 L+ D++ LV +V +T L + + Q Q ++ ER I+RELHDSIAQSLS +K+Q Sbjct: 177 DLTPDEKSLVQDVVTLMTNKLLRENQIQCQHQSMLAAERTAISRELHDSIAQSLSFLKIQ 236 Query: 413 VSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEY 472 V+CL + D LP+ S L+ I++ELN ++ QLRELL TFR + + L+ +L+ E+ Sbjct: 237 VNCLYIGSDNLPKQSLTSLNMIKDELNIAYRQLRELLATFRNEQPQCNLQESLQTLISEF 296 Query: 473 SAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKL 532 + + GF ++ +Y+L + +P + HL+QI RE L+N KH+ A+ + + + D+++ Sbjct: 297 NHRLGFNIEFNYRLTHQHIPDSYSKHLIQIIRECLNNCYKHANANWISIRIYPIDDKIIT 356 Query: 533 TVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 V DNG G+ ++ N +G+ IM+DR L G +++ R+ GGTEV + F Sbjct: 357 VVSDNGQGINLDSANKNKFGLAIMQDRVSILGGQLQIKNRKHGGTEVEIQF 407 >UniRef50_Q4FU45 Signal transduction histidine kinase sensor n=2 Tax=Moraxellaceae RepID=Q4FU45_PSYA2 Length = 707 Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 173/668 (25%), Positives = 302/668 (45%), Gaps = 110/668 (16%) Query: 15 VALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVP--------- 65 ++++ +ST G G L + A AIN AGS+RM +YR+ + Sbjct: 40 ISILCFISTLGG-------GMLAWVSETDAQAINTAGSIRMATYRISFQLATNFSENNPF 92 Query: 66 --------------------------LSEKDK-------------PLIKEMEQ---TAFS 83 + E+DK LI++ME Sbjct: 93 DLNIGLKKNDLEGKKEGTENVKGENRIGEQDKLSPIRKEKTEEISTLIEDMESRLAELHD 152 Query: 84 AELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDR 143 +L A + +G QL+ ++ W EL PAL+ +Q+ + +++ +D V+ Sbjct: 153 YQLANANDNEGINNQLKQIESQWFRELKPALL-SQDAQKFYIVSFKYIEDVDSFVNELQY 211 Query: 144 TTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANI 203 E R ++ V V ++++ + LR +L P +QL+ + +I Sbjct: 212 RNEQRQTWQQILQIVSLVLTVIIMLVGMQRLRQNVLIPVQQLIKANYKFKQGKRNTKVSI 271 Query: 204 SGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAP 263 SG E LG + N+M++ + LE VQ KT L NQ+LS + ++ L + Sbjct: 272 SGYTEFNALGDSFNDMASTIETHQRSLESEVQIKTQHLVKANQVLSLFYDFSKSLTTSQV 331 Query: 264 LCERLSPVLNG----LQNLTLLRDIELRVYDTDDE-----ENHQEFTCQPDMTCDD---- 310 RL ++ L +L I+ + + + E +E C+ + CD+ Sbjct: 332 SLYRLDTLITDFGKILPHLEFTLCIQNKFINNKNAIILHGEKMKEL-CKK-LNCDNCLTK 389 Query: 311 KGC-----------------QLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGR- 352 +G ++ P+ VL + +TL D +T + +GR Sbjct: 390 EGVYTKSYPIAHQKVEFGELKVRPKSVLLIN---STLFPNNNDGNTPSSQRIQIAKEGRT 446 Query: 353 --------HLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQ 404 L + +L+ L ++ L+L + ++++ QLI+ EER+TIARELHDS+AQ Sbjct: 447 FFESEIGSELDLENNELIVALTNLISTALSLRKQRQQEHQLILFEERSTIARELHDSLAQ 506 Query: 405 SLSCMKMQVSCLQMQ----GDALPESS-RELLSQIRNELNASWAQLRELLTTFRLQLTEP 459 SLS +K+Q+S L+ D E+S R+ + QI+ L++++ QLR+LL TFRL + Sbjct: 507 SLSYLKIQISVLERHLKNGSDEQNEASVRQHIDQIKAGLSSAYQQLRDLLITFRLTIDND 566 Query: 460 GLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEV 519 AL + E++ K F + + ++ + + + I L+QIAREALSN +H+QA V Sbjct: 567 NFDEALHEAANEFALKGKFEITVSNRVMTLNLSATEQIDLIQIAREALSNISRHAQAENV 626 Query: 520 VVTVAQNDNQ--VKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 + + +D + +T+ DNG G+ ++ H+G++IM++RA +L G+ V ES GT Sbjct: 627 EIDLGYDDEDKYIVMTIVDNGVGISGTVDQTQHHGLMIMKERAHNLGGELIVSNNESQGT 686 Query: 578 EVVVTFIP 585 + F P Sbjct: 687 TITAKFAP 694 >UniRef50_D0IAW0 Nitrate/nitrite sensor protein n=3 Tax=Gammaproteobacteria RepID=D0IAW0_VIBHO Length = 594 Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 161/578 (27%), Positives = 279/578 (48%), Gaps = 44/578 (7%) Query: 16 ALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKP-LI 74 +LI +L A+ + G A+ + + A AIN +GSLRMQSYR+ + L+ P I Sbjct: 48 SLIGILFLAVIITGFAI--FTLASSLNDAAAINTSGSLRMQSYRMAYDIVLAPSRLPGHI 105 Query: 75 KEMEQTAFSAEL---TRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQFV 131 EQ+ + EL A D + L + W +L P L + +R V FV Sbjct: 106 DNFEQSLLAPELRILDNFAVPDEIRERYHSLIERWI-KLRPEL-ESDDRAFYIEQVGLFV 163 Query: 132 AGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASA 191 +D+ V + +E +++ + +V + L++F I + + R++ P L+ + Sbjct: 164 NDIDRFVFALQQHSENKLQVLAMVGSGGLGLILALVLFLIQYTQRRIVFPLNMLVKASQQ 223 Query: 192 VSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFL 251 + +R+F + NE+ +L + M++EL YA LE ++ KT L NQ L+ L Sbjct: 224 IQNREFDAELPPARNNELGVLSNSFALMASELKGLYADLEHKITTKTQKLTKANQSLNIL 283 Query: 252 WQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDK 311 + +++L S E +L N ++ + L+ ++ +N ++ + Sbjct: 284 YDCSKQLSSTFLNRESFERMLAITLNADGVKALSLQAHN----KNQSDWEIAAGFP---E 336 Query: 312 GCQLCPRGVLPVGDRGTTLKWR----LADSHTQYGILLATLPQGRHLSHDQQQLVDTLVE 367 G + ++ G+ TLKW+ + D++ L + L +G + +H Q+Q + Sbjct: 337 GGEWFELPLILDGESFGTLKWQGNPDIVDNNLLSN-LASILARGVYYNHAQKQAM----- 390 Query: 368 QLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDAL--PE 425 L VMEERAT+ARELHDSIAQSLS +K+Q S L+ + P+ Sbjct: 391 ----------------HLAVMEERATLARELHDSIAQSLSYLKIQTSLLKRHLKLINAPD 434 Query: 426 SSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQ 485 + ++ I +L ++ QLRELLT FRL L+ AL E + + + Sbjct: 435 CN-DIAHDISKQLRIAYDQLRELLTAFRLSLSHGDFGLALHEMIETLQGQTTATLTVSSD 493 Query: 486 LPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENA 545 L + + + +H+LQI REA SNA+KH++A + V Q+ +Q ++ + D+G G Sbjct: 494 LDTLSMDAQRQMHILQIIREACSNAIKHAKAEHITVRCFQHSHQARVDITDDGVGFSLIE 553 Query: 546 IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + +HYG+ IM++R+ L GD ++ G +V +TF Sbjct: 554 EKPDHYGLNIMQERSSMLGGDLKITTAPEKGCQVTLTF 591 >UniRef50_A5EZZ3 Nitrate/nitrite sensor protein NarQ n=51 Tax=Vibrionales RepID=A5EZZ3_VIBC3 Length = 583 Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 167/594 (28%), Positives = 286/594 (48%), Gaps = 62/594 (10%) Query: 10 TLVNQVALIVLLST-AIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSE 68 T+ + LI+ LS G+A + ++ L A A+N +GS+RMQSYRL + Sbjct: 21 TMAKAMLLILFLSALTTGVAIVTLASSL-----NDAEAVNVSGSMRMQSYRLAYDIQTQS 75 Query: 69 KD-KPLIKEMEQTAFS----AELTRAAERDGQLAQLQGLQDYWR-----NELIPALMRAQ 118 D K I E + +S A L D Q QDY++ +EL L Q Sbjct: 76 HDYKAHIFLFENSLYSPSMLALLDWTVPSDIQ-------QDYYQLIERWHELKKVLNSDQ 128 Query: 119 NRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARL 178 + + V+ FV+ +D V R +E ++ + V + + +F + ++R ++ Sbjct: 129 KAQYLD-QVAPFVSLVDGFVLKLQRFSERKLIALAAVGSFGLGGIFAVSLFVVYYIREQV 187 Query: 179 LQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKT 238 ++P ++ + + +R+F + EM +L N+M+ +L + Y LE V EKT Sbjct: 188 VRPLNAMVDASEKIKNRNFDVMLEETSSTEMGILSRTFNSMAGDLGKLYRGLEHAVNEKT 247 Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLN---GLQNLTLLR-DIELRVYDTDDE 294 L+ NQ L L+ +++ L + +L L+ + LR +IE Sbjct: 248 NKLQMANQSLQVLYHSSQELTASRITASNFQTILRHWVALEGICALRLEIE--------- 298 Query: 295 ENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHL 354 ++ G L + P G L H + A P+ Sbjct: 299 --------------EEAGKPLILQEGKPSGAVMLQTPLTLDGHHLGFLYWEAGSPE---- 340 Query: 355 SHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVS 414 + L+D L+ + ++ Q + +QL++MEERATIARELHDS+AQSLS +K+Q++ Sbjct: 341 --PDRALIDNFALILSRAIYYNQAQRQAEQLLLMEERATIARELHDSLAQSLSYLKIQLT 398 Query: 415 CLQ-----MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASC 469 L+ ++ D + ++ +I L+ ++ QLRELLTTFRL LTE +L Sbjct: 399 LLKRSVTPLKSDGDLSKTENIIREIDKGLSDAYTQLRELLTTFRLTLTEGSFGQSLLGML 458 Query: 470 EEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQ 529 + S + ++L+ L + +HQ +HL+Q+ REA NA+KH++A+++ V + + Sbjct: 459 TQLSGQTDAKIELNNALSSIALDAHQQVHLVQLIREATINAIKHAKATKIKVNCQEQQGR 518 Query: 530 VKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 V++T++D+G G + NHYGM IM++RA LRG+ +V G +VV+T+ Sbjct: 519 VQVTIEDDGVGFDLQDHKINHYGMSIMQERAARLRGELKVESAPGKGCKVVLTY 572 >UniRef50_B2CI54 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Pantoea sp. MMB051 RepID=B2CI54_9ENTR Length = 515 Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 169/553 (30%), Positives = 246/553 (44%), Gaps = 93/553 (16%) Query: 41 QGSAHAINKAGSLRMQSYRL----LAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQL 96 Q A A+N AGSLRMQSYRL A D + Q+ L A D Sbjct: 47 QRDAEALNMAGSLRMQSYRLAWDASAHPAALAADIASYQRSVQSPALLALRHAWVPDSVK 106 Query: 97 AQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVH 156 A+ + L W++ L P L +R +VS +V +D V R E++++ V Sbjct: 107 ARYRELLASWQS-LQPELQTGDSRR-FQQNVSLYVEQIDSFVLALQRWAELKMKLAV--- 161 Query: 157 RVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTAL 216 A LL F I L L A Sbjct: 162 ------GACLLSFIAILL-------------------------------------LAKAF 178 Query: 217 NNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQ 276 MS EL + Y LEQ V+EKTA L N+ L L+Q + L R + + Sbjct: 179 CRMSGELEKQYLWLEQAVKEKTAHLRQANRRLKLLYQCSEILRGHDKAYSRALALAKEHE 238 Query: 277 NLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWR-LA 335 NL+ + PR L VG T L W L Sbjct: 239 NLSAV------------------------------ALSAPPRWQLSVGQEDTALAWHSLP 268 Query: 336 DSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIA 395 T G+L S + QL+ L L +L LD +E+ + L++MEERATIA Sbjct: 269 LEQTIGGVL------RWQASASEPQLMKGLASMLARSLQLDEAEEKVRHLLLMEERATIA 322 Query: 396 RELHDSIAQSLSCMKMQVSCLQMQGDALPESS-RELLSQIRNELNASWAQLRELLTTFRL 454 RELHDS+AQSL +++Q++ +++G ES+ ++S++ L + QLRELLTTFRL Sbjct: 323 RELHDSLAQSLVYLRIQMT--RLKGIVGKESAPAAIVSEVDAALAEANRQLRELLTTFRL 380 Query: 455 QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHS 514 + L AL + + ++L P+ + +HQ +H+LQI REAL NA++H+ Sbjct: 381 SIEPADLATALAQVIAQLRPQTEAVIQLTGDTQPQHLNAHQQVHVLQIVREALLNAIRHA 440 Query: 515 QASEVVVTVAQNDNQ-VKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRE 573 QASE+ V VA+ + + +++ V DNG G + + HYG+ IM++RA+SL + + E Sbjct: 441 QASEIEVRVARPEEKLLQIEVNDNGQGFNQPGEKPGHYGLAIMQERAKSLGATLEIGQTE 500 Query: 574 SGGTEVVVTFIPE 586 GGT V + F E Sbjct: 501 YGGTRVSLRFAAE 513 >UniRef50_C0N1R0 Histidine kinase domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N1R0_9GAMM Length = 615 Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 92/266 (34%), Positives = 159/266 (59%), Gaps = 4/266 (1%) Query: 322 PVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQER 381 P G++ + + + G+LL + +GR L + ++++ L+ H E Sbjct: 350 PEGEKVSCMGMTFSGISNGVGVLLVEMDEGRFLEDSEVKVLEITTRLLSMVTKFQSHDEE 409 Query: 382 QQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNAS 441 ++L V+EERA IARELHDS+AQSLS MK+QV+ LQ + A + +++ ++R L+ + Sbjct: 410 GRRLAVLEERAAIARELHDSLAQSLSFMKIQVARLQAKSGAQQD---DVVKELREGLDNA 466 Query: 442 WAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQ 501 + +LRELLTTFR+ + GL A++A+ +E+S + + D +L + ++ H+L Sbjct: 467 YRELRELLTTFRVHMDLRGLGYAIQATIDEFSQRSQLVISFDNRLVNCRLTVNEEFHILH 526 Query: 502 IAREALSNALKHSQASEV-VVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRA 560 + REALSN ++HS A V ++ + Q + +V+LT+ D+G G + +H+G IM++RA Sbjct: 527 VVREALSNIVRHSGADNVTILMLLQKNGEVELTIDDDGVGFHPASDTYDHHGQAIMKERA 586 Query: 561 QSLRGDCRVRRRESGGTEVVVTFIPE 586 Q+L G+ V R GGT V ++F+P+ Sbjct: 587 QTLGGNVEVMARRFGGTRVRLSFMPK 612 >UniRef50_C6QH09 Histidine kinase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QH09_9RHIZ Length = 619 Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 95/260 (36%), Positives = 155/260 (59%), Gaps = 6/260 (2%) Query: 334 LADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERAT 393 D+ + +LL L R L + + + L+ LD H + +++ V+EERA Sbjct: 356 FVDATGETSVLLVELSGDRTLEAVEIKTLRITASLLSMAAKLDGHDQEARRIAVLEERAA 415 Query: 394 IARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRE----LLSQIRNELNASWAQLRELL 449 IARELHDS+AQSLS MK+Q++ LQ + + SRE + S++R+ L+ ++ +LRELL Sbjct: 416 IARELHDSLAQSLSFMKIQLARLQSYQNNVTSESREQTKAITSELRHGLDNAYRELRELL 475 Query: 450 TTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSN 509 TFR+ + GL A+E++ EE+S + G P+ LD +L + ++ H+L + REALSN Sbjct: 476 ATFRVHMDVRGLDFAIESAIEEFSQRSGLPISLDNRLAGAALTVNEEFHVLHVVREALSN 535 Query: 510 ALKHSQASEVVVTV-AQNDNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGDC 567 L+H++A+ V +T+ + + +V +T+ D+G G P ++H+G IM++RA SL G Sbjct: 536 ILRHARATNVWITMDVRRNGEVTVTIDDDGIGYRPAETKETSHHGQTIMKERAFSLGGAI 595 Query: 568 RVRRRESGGTEVVVTFIPEK 587 + R GT V +TF P+K Sbjct: 596 DIAPRPEAGTRVTLTFTPQK 615 >UniRef50_Q1H473 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H473_METFK Length = 603 Score = 168 bits (425), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 93/247 (37%), Positives = 144/247 (58%), Gaps = 2/247 (0%) Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 G LL G+ L + + L+ L +E+ ++L + EERA IARELHDS Sbjct: 354 GTLLLEAKPGQEFHESDITLAEITAQLLSLVLGAQSREEQARRLALFEERAAIARELHDS 413 Query: 402 IAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGL 461 +AQSL+ MK+Q++ LQ QG + E+ +++R L+ ++ +LRELL+TFR+ + GL Sbjct: 414 LAQSLAYMKIQIARLQTQGSGGQHDTNEITTELREGLDTAYRELRELLSTFRMHMDVRGL 473 Query: 462 RPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVV 521 A++A+ +E+S + + LD +L + ++ H+L + REALSN ++H+ A VVV Sbjct: 474 GFAIQAAIDEFSHRSSVSITLDNRLVNCRLTVNEEFHILHVIREALSNIIRHAGAKNVVV 533 Query: 522 TVAQN-DNQVKLTVQDNGCGVPENAI-RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 +A + V +T+ D+G G+P A HYG IMRDRA SL GD + R GGT V Sbjct: 534 ALAYTPGSTVVVTIDDDGVGIPATATDEPGHYGQSIMRDRAYSLGGDITISARRQGGTRV 593 Query: 580 VVTFIPE 586 + F P+ Sbjct: 594 RLIFTPK 600 >UniRef50_Q47HU2 GAF:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase, dimerization and phosphoacceptor region n=1 Tax=Dechloromonas aromatica RCB RepID=Q47HU2_DECAR Length = 646 Score = 167 bits (424), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 167/639 (26%), Positives = 289/639 (45%), Gaps = 79/639 (12%) Query: 15 VALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLI 74 V ++ ++AIGL + +S W ++GV A AIN AGS RM++YRL + + + + Sbjct: 17 VVFFLVATSAIGLT-LLIS-WQLEGV---AAAINDAGSQRMRTYRLGHLMARGLEAETQV 71 Query: 75 KEMEQTAFSAELTR--AAERDGQLA----------------QLQGLQDYWRNELIPAL-- 114 + A S E+ R +RD QL +L ++ WR + P + Sbjct: 72 AAL-TAALSEEVVRFDKVQRDLQLGDPLRPLSSPRNFEVQDRLHDVEQSWRRIIRPLVES 130 Query: 115 -------MRAQNRETVSADVSQFVAGLDQLVSGFDR-----TTEMRIETVVLVHRVMAVF 162 R++ + ++ V G+++LV +R T +R V LV ++A+F Sbjct: 131 YLAGDHQARSEVLDRFDLELEPSVMGINELVLAMERSYAYDTNLLRYVQVALV--LLAIF 188 Query: 163 MALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAE 222 ++L I + +++P L ++ D T R ++ +E+ L N M+ Sbjct: 189 GTVIL---IRFFEQLVIRPVSLLHVGMRRMTGNDLTVRVPVTSDDELGGLAAGFNQMAEH 245 Query: 223 LAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLR 282 L ++Y LEQR++ +T L +N L L+ A L APL L+ ++N Sbjct: 246 LEDAYGSLEQRIEAETRRLAQRNHELGILYAATSFLSEPAPLEALCEGFLDHIKNALGAD 305 Query: 283 DIELRVY--DTDD------EENHQEFTC-QPDMTCDDKGCQLCPRGVLPV---------G 324 +R+Y TD E EF + + C + C + P G Sbjct: 306 AGAVRLYVPQTDKLYLMTHEGLSDEFVANEGQLNCGECLCGEVFQSSRPAAFATANPPEG 365 Query: 325 DR---------GTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLAL 375 R T + + + G+ + + LS + L++TL L + Sbjct: 366 MRLRSCIREGFATATAFSILYDKQRLGVYNLYFRRSQALSEQEIHLLETLGHHLGVAIEN 425 Query: 376 DRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ---MQGDALPESSRELLS 432 R + R+++L V EER +A+ELHDSIAQ L+ + +QV LQ +G A + + + Sbjct: 426 QRLKSREKELAVSEERNLLAQELHDSIAQGLAFLNIQVQLLQDSLRKGKA--DEAMQTAG 483 Query: 433 QIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVP 492 Q+R + S+ +RELL FR ++ + L A+ A+ E++ + G + + +P Sbjct: 484 QLREGVQESYDDVRELLVHFRTRVHQSDLDSAINAALEKFEGQTGIQTEFERIGATTPLP 543 Query: 493 SHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV-PE---NAIRS 548 I ++ I +E+LSN KH++A V VTV Q K+ V+D+G G P+ N + Sbjct: 544 PTDEIQIMHIVQESLSNIRKHAKAKRVRVTVRQELGTSKVMVEDDGIGFDPQNDPNCLSD 603 Query: 549 NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEK 587 H G+ IMR+RA + G+CR+ G+ V+++ E Sbjct: 604 RHVGLKIMRERAHRIGGECRITSNPGQGSCVILSLPKEN 642 >UniRef50_C4GHV1 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GHV1_9NEIS Length = 578 Score = 167 bits (424), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 159/598 (26%), Positives = 283/598 (47%), Gaps = 44/598 (7%) Query: 6 LSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVP 65 L P +LV+++ L+V ++++ L ++G A A+N G LR Q+YRL + Sbjct: 4 LIPKSLVSRLTLLVTTWLISAFIAISITMLLSLRLEGGAAAVNDTGGLRYQTYRLRLYLN 63 Query: 66 LSEKDKPLIKEMEQTA---FSAELTRAAE--RDGQLAQ-LQGLQDYWRNELIPALMRAQN 119 + K + LI+ +QT ++ TR +D + Q L+ LQ YW ++ P ++ N Sbjct: 64 DTSKVQSLIQTFDQTLARLHHSDPTRPLNLPQDRSIQQHLKLLQQYWETQIKPQ-YQSPN 122 Query: 120 RETVSAD---VSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRA 176 D + FVA +D L + ++ + + + V + ++ TI+ L+ Sbjct: 123 PNLALLDNHLIPNFVASIDSLTRTIEHNNAYYVQWLRVFQTALMVLIFVVSGITIVLLKI 182 Query: 177 RLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQE 236 +++P + L +A+ + F + E A++ N MS+ LA Y LEQ+V E Sbjct: 183 WIIRPLKNLETGVAAIQNSQFGEHIPEDNSTEFAIVDNGFNRMSSHLARLYGKLEQQVAE 242 Query: 237 KTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEEN 296 KT L KN L+ L+ + L+ + + L + LT ++ V++ Sbjct: 243 KTQDLVRKNHTLNTLYTVAQELNQTQTIRQAAQTFLPHILALTPAEAADVSVHNNLIARQ 302 Query: 297 HQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSH 356 + QP+ P + P T +++ + T G L+ Q R + Sbjct: 303 SKR---QPE----------TPPSLPPF-----TQSFKIRANETTLGTLVLYYNQ-RQPEN 343 Query: 357 DQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL 416 LV TLV QL + ++ E +Q V++ER TIA+ LHDSIAQSLS + +Q L Sbjct: 344 PDGGLVQTLVHQLALAIHNNQLAEESRQYAVLQERNTIAQGLHDSIAQSLSYLSLQTQML 403 Query: 417 QMQ-GDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAK 475 + + ++++E L I+ + + +RELL FR ++T+ + A+E + + + Sbjct: 404 ENAWANQETQAAQENLQSIKTGIQECYDDVRELLQNFRTKITQKNINEAIETLAQRLAEQ 463 Query: 476 FGFPVKLDYQ---LPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQ--V 530 V ++ P L PS Q + + I +E+LSN KH+QA V + + DNQ Sbjct: 464 SHIRVHTEWHGNGAP--LTPSQQ-LQFIFILQESLSNIRKHAQAQNVTIRI---DNQQDY 517 Query: 531 KLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEK 587 LT+ D+G G P +H G+ IM++RAQ +R ++ +++ T + +T +P+K Sbjct: 518 TLTITDDGIGFNPHTERTDDHIGLNIMQERAQRIRARLSIQSQQN-HTRIQLT-LPKK 573 >UniRef50_Q7NV12 Transmembrane nitrate/nitrite sensor kinase transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NV12_CHRVO Length = 632 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 162/599 (27%), Positives = 265/599 (44%), Gaps = 58/599 (9%) Query: 40 VQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLA-- 97 ++G A AIN GSLRM+++R AA +S + + E F L R D Sbjct: 43 LEGGAAAINDVGSLRMRTFR--AAYLMSTQAPERVLRDEVAGFDQTLARLKRGDPARPLF 100 Query: 98 ---------QLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTE-- 146 Q + L+ WRN++ P L+ A + + + FVA +D LVS +R E Sbjct: 101 LPDNRDIRDQERRLEQRWRNDIRPLLLAADGAQPSAQRLHGFVAEIDNLVSLLERDNENH 160 Query: 147 ---MRIETVVLVHRVM--AVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRA 201 +R+ +VL+ + AV MA +L +I P R L + + R Sbjct: 161 TNLLRMFQMVLIAMALAGAVTMAYMLFLMVI-------NPVRALSDAMRRLREGELDTRV 213 Query: 202 NISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSR 261 + ++E+ ML N M+ + Y LE +V +KT +E +N L L+ LH + Sbjct: 214 KVDRQDELGMLAEGFNQMAERAQDLYQNLESKVAQKTREVEEQNLRLKTLYDMTSFLHQQ 273 Query: 262 APLCERLSPVLNGLQNLTLLRDIELRVYDTD----DEENHQEF--------TCQPDMTCD 309 L E + L LT R+ D + D+ Q C PD C Sbjct: 274 RALDETCQGFIRRLMQLTGADAANARLVDPERGKLDQIAQQGLPAEMALNEECIPDDACH 333 Query: 310 DKGCQLCPRGVL-PVGD-RGTTLK------------WRLADSHTQYGILLATLPQGRHLS 355 P VL +G+ G ++ + + + GI Q R LS Sbjct: 334 CGEAVQQPFAVLRHIGELEGEEIRHCRKAGFASIAVFHIRNQREDVGIFTLYFRQKRVLS 393 Query: 356 HDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSC 415 +Q L++TL + L + R ++Q V EER +A+ LHDSIAQSLS + +Q Sbjct: 394 MAEQMLIETLGQHLGVAIENQRLGAVERQFAVSEERNLMAQGLHDSIAQSLSFLNLQTQM 453 Query: 416 LQMQGDALPES-SRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSA 474 L+ ++ E+ +RE L+ IR + + +RELL FR ++++ A+ + + Sbjct: 454 LEDAMNSREEALARENLAFIRAGVQECYEDVRELLLNFRTRISQQEFPEAVRTLLQRFEQ 513 Query: 475 KFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTV 534 + P +L+ + + + Q + + I +EALSN KH++ASEV V + N + + Sbjct: 514 QTRVPARLEMRGEGKPLDPQQQLQVFFILQEALSNIRKHAEASEVEVEI-DNTASFSMRI 572 Query: 535 QDNGCGVPEN---AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFT 590 +DNG G A + H GM IM++RA+ + ++R + GT V +T E+ + Sbjct: 573 RDNGRGFDSGQLAAKSARHVGMSIMQERAKRIHSHIQIRSAPTQGTTVELTLPKEERIS 631 >UniRef50_A2SGG0 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=2 Tax=Burkholderiales RepID=A2SGG0_METPP Length = 643 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 174/647 (26%), Positives = 279/647 (43%), Gaps = 82/647 (12%) Query: 3 KRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLA 62 R L +L ++ + L + L +A + W+ ++G A A+N+AG LRMQ++R Sbjct: 9 SRRLQRASLAAKLGALGSLIMVVALGSIAFTVWVTWQLEGGAAAVNEAGRLRMQTWRY-- 66 Query: 63 AVPLSEKDKPLIKEMEQTAFSAELTRAAERD-----------GQLAQLQGLQDYWRNELI 111 A S +D P + + Q + A L D A LQ ++ W+ Sbjct: 67 AQVASAQDLPQLPALAQQ-YDATLALLDAGDPARPLFVPRDEDTRAALQAVRSRWQ---- 121 Query: 112 PALMRAQNRETVSADVSQFVAGL----DQLVSGFDRTTEMRIETVVLVHRVMAVFMALLL 167 AL RA + Q L D LV+G + + + + + Sbjct: 122 -ALQRAISEGATPLQAGQLAGDLVIEIDHLVTGIEAHLQRWTSILSALQFTLLALALAAG 180 Query: 168 VFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESY 227 V + + QP +L AV+ D R ++ +E + N+M+ L + Y Sbjct: 181 VALLYAAHLFIFQPLARLQRGLEAVARGDLGARVDVETHDEFGEVADGFNHMAMRLEDLY 240 Query: 228 AVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELR 287 LE +V EKT L + + L+ L++A+RR+ A L E + + + LR Sbjct: 241 RGLETKVAEKTEHLRTERERLAALYEASRRVAQAASLDELAQGFVRQFREVARADAALLR 300 Query: 288 VYDTDDEE--------------NHQEFTCQPDMTCDDKGCQLCPRGV----LPVGDRGTT 329 +D + H+ D C + PR + L GD G + Sbjct: 301 WHDAEQGRMLMLAADRVPAAMLEHERCLAPGDCHCGNGAAPGGPRTITIHALTDGDTGDS 360 Query: 330 LKWRLADSHTQYGI-LLATLP-----------------QGRHLSHDQQQLVDTLVEQLTA 371 A + ++G + TLP R + D + L++ L QL Sbjct: 361 -----AGTCRRFGFQRVLTLPVLLQDQTLGEVDLLWRDATRPVLDDDRALLEGLAAQLAG 415 Query: 372 TLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELL 431 + R Q Q++ V EER IARELHDSIAQ+L+ MK+Q LQM AL Sbjct: 416 GIESVRAQALQREAAVSEERGFIARELHDSIAQALAFMKIQ---LQMLRGALRRGDPAAT 472 Query: 432 SQIRNELNA----SWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLP 487 +++ +EL+A S A +RELL FR + L AL A+ +++ + G P +LD + P Sbjct: 473 TRVVDELDAGVRESLADVRELLLHFRTRSDGAELAAALRATLQKFQHQTGLPAQLDVRGP 532 Query: 488 --PRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENA 545 P L P Q + LL + +EALSN KH+QA +V VT+ ++ +TV+D+G G A Sbjct: 533 VLP-LAPDVQ-VQLLHVVQEALSNVRKHAQARQVWVTLDPR-PELSVTVRDDGRGFDLAA 589 Query: 546 IRSN-----HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEK 587 S+ H G+ IMR+RA + + + GT+V + +P + Sbjct: 590 RNSDDGDDGHVGLRIMRERAAGIGAEVEITSTRGEGTQVRIA-VPSR 635 >UniRef50_Q5NYZ8 Nitrate/nitrite sensor kinase n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NYZ8_AZOSE Length = 651 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 168/647 (25%), Positives = 271/647 (41%), Gaps = 90/647 (13%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYR---LLAAVPL 66 +L ++ I+L+ + L + ++ ++ ++G+A AIN AGSLRM++YR LLA P Sbjct: 7 SLATKITGILLVFFLVALTAIGLTLFISWQLEGAAAAINDAGSLRMRAYRIDHLLARGPA 66 Query: 67 SEKDKPL---------IKEMEQTAFSAELTRAAER--------DGQLAQLQGLQDYWRNE 109 + + P+ + E+ EL R R +G A L + ++W Sbjct: 67 ATSNDPMAFTASLKSEFDDFERV--FGELRRGDPRRPLFIPRDNGIPADLDEMAEFWSLR 124 Query: 110 LIPALM----------RAQNRETVSADVSQFVAGLDQLVSGFDR-----TTEMRIETVVL 154 + P L R V FV+G++++V +R T +R V L Sbjct: 125 IRPVLADLIATSDPERRRPGLAEFDRTVKSFVSGINEVVLKMERSYARNTDILRASQVSL 184 Query: 155 VHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGT 214 + +A+ L+L+ L ++QP +L + DF R + +E L Sbjct: 185 I--ALAIIGTLVLIRFFFVL---VIQPVCELQDGMKRMEQEDFNARVPVLASDEFGELSE 239 Query: 215 ALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNG 274 N M+ L YA LE+RV KT LE KN+ L L+ L + + L Sbjct: 240 GFNRMAVHLQGLYATLEERVAAKTRSLEGKNRELEILYDIGAFLREPSDVDSLCRGFLQR 299 Query: 275 LQNLTLLRDIELRVYDTDDEE---------NHQEFTCQPDMTCDDKGCQLCPRGVLPVGD 325 +Q R+ D+ E + + + + C G LC V Sbjct: 300 VQATFGAGASSARLLDSGSENLCLTVHNGLDREFIDREAVLQC---GECLCGEAV----R 352 Query: 326 RGTTLKWRL--------------------------ADSHTQYGILLATLPQGRHLSHDQQ 359 RGT+L L A+ T GI R LS + Sbjct: 353 RGTSLVSELSAPDPALTLSVCRRAGFQVITATAITANKQT-LGIYNLYFVGARPLSDSDR 411 Query: 360 QLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ 419 L++TL +QL + R Q ++ V EER +ARELHDSIAQ L+ M +QV L+ Sbjct: 412 LLLETLGQQLGIAIENQRLQASGREHAVSEERNLLARELHDSIAQGLAFMNLQVQMLESA 471 Query: 420 GDALPES-SRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGF 478 D +R+ L+ +R + S+ +RELL FR ++ + L A+ A+ + + G Sbjct: 472 LDRNEAGEARDTLAMLRQGVQESYDDVRELLVHFRTRVEKQDLALAITATLRRLAEQTGI 531 Query: 479 PVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNG 538 LD + + +L + +EALSN KH+ A V V + + + + + V+D+G Sbjct: 532 ATDLDVLGDAAPLDAEAETQVLYVVQEALSNVRKHANARSVKVVIRRGIDGLSVVVRDDG 591 Query: 539 CGVPE----NAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 G E A + H G+ IMR+R + G +R GTE+ V Sbjct: 592 VGFDEADRSTAAQEAHIGLEIMRERTLRIGGRFSIRSARGKGTEIRV 638 >UniRef50_C1D9F9 NarX n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D9F9_LARHH Length = 637 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 168/596 (28%), Positives = 272/596 (45%), Gaps = 56/596 (9%) Query: 40 VQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDG----- 94 ++G A AIN AGSLR ++Y L A ++ E E+ F L + D Sbjct: 45 LEGGAAAINDAGSLRKRTYHL--AYLIASHAPAARIEHERQDFRVTLNNLRQGDPARPLF 102 Query: 95 -----QLAQLQGLQDY-WRNELIPALMRAQNRET--VSADVSQFVAGLDQLVSGFDRTTE 146 ++ ++ L D W+NE+ P + RA E + D V ++ LV + Sbjct: 103 LPDNPEVHRMAALIDARWQNEVHPYVQRALRGEIQLTAVDFEDVVNDINLLVHLIE-LDN 161 Query: 147 MRIETVVLVHRVMAVFMALLLVFTIIWLRARL-LQPWRQLLAMASAVSHRDFTQRANISG 205 R T++ + + MAL+ T+++L L +QP RQL A + D R ++ Sbjct: 162 ARNTTLLRFFQTSLIAMALIGCVTMLYLLYLLVIQPVRQLGAGMRKLHDGDLGARVKVAS 221 Query: 206 RNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLC 265 R+E +L N M+ L + YA LE +V+EKT +E KN+ L+ L+Q LH P Sbjct: 222 RDEFGVLSEGFNEMARRLQDLYANLEDKVREKTLSVEEKNRQLTALYQVTSFLHR--PQT 279 Query: 266 ERLSPVLNG-LQNLTLLRDIE---LRVYDTDDEENHQEFTCQ-PDMTCDDKGC---QLCP 317 + L + G LQ + L + L+ D + Q + PD + C + CP Sbjct: 280 QTLDEMGEGFLQRVMALVGADAASLKFVDAQRGKLDQIVSVGLPDSLNVHETCVSVEQCP 339 Query: 318 RGV-----LPV---------GD---RGTTLKWRLADSHTQY-----GILLATLPQGRHLS 355 G LPV GD R T LA H +Y +L R ++ Sbjct: 340 CGAALKQALPVAVHLNEVCAGDWPCRNTGFA-SLAVFHVRYHGQNVALLTLLFRTPRSVA 398 Query: 356 HDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSC 415 L++TL L + R ER++QL V EER +A+ LHDSIAQSLS + +QV Sbjct: 399 EPDANLIETLASHLGTAIESRRLAERERQLAVAEERNLMAQGLHDSIAQSLSFLNLQVQM 458 Query: 416 LQMQGDA-LPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSA 474 L+ +A E+++E L+ IR + + +RELL FR ++++ A+ + Sbjct: 459 LESALEAGESEAAQENLAFIREGVAECYEDVRELLLNFRTRISKEEFPDAVRTLLARFEQ 518 Query: 475 KFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTV 534 + L + + Q + ++ I +EALSN KH+ A +V V + +N ++ + Sbjct: 519 QARVLTHLQLEGEGLPLNPEQQLQVIFILQEALSNIRKHAAAGKVEVNI-RNGQDFEMDI 577 Query: 535 QDNGCGVPENAI---RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEK 587 D+G G ++A+ ++ H G+ IMR+RA + + R GT V + +P K Sbjct: 578 VDDGYGFDQSALAARQARHVGLSIMRERATRIAATVDIMSRPGEGTRVSLV-LPHK 632 >UniRef50_B4RLW4 NarX/NarQ n=17 Tax=Neisseria RepID=B4RLW4_NEIG2 Length = 589 Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 145/580 (25%), Positives = 265/580 (45%), Gaps = 63/580 (10%) Query: 40 VQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTA-FSAELTRAAERDG---- 94 ++ +A I +AG+L+MQ+YRL ++ + P + Q A F L R ++ D Sbjct: 42 LENAASVIEEAGNLKMQAYRL---AYMAGEGSPRAQIDNQIAEFEKSLKRISQSDAIHPL 98 Query: 95 ---------QLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTT 145 L Q + D W+ ++P L +A R T ++ +F ++ + + Sbjct: 99 IPSDNPLAYDLIQSMLIID-WQANILPPL-QAYRRPT-QIELYRFAGNIELFLQALENAG 155 Query: 146 EMRIETVVLVHRVMAVFMALLLVFTII---WLRARLLQPWRQLLAMASAVSHRDFTQRAN 202 E + + R V M + LV +++ W + +++P + L A + R F Sbjct: 156 E---KNTWWLRRFQWVIMLMTLVSSVLMLFWHQIWVIRPLQALREGAERIGQRHFDIPVP 212 Query: 203 ISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLH--- 259 G E +G N M+ L Y LE +V E+T LE +N+ L+ L++ R LH Sbjct: 213 EDGTPEFKQVGRCFNQMALRLKTLYDDLEGQVAEQTHNLEKQNRNLTLLYRTTRDLHQSY 272 Query: 260 -SRAPLCERLSPVLN--GLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLC 316 R E L+ +L G Q+ + C + + D Sbjct: 273 TPRQAAEEFLNHILPAVGAQSGNI---------------------CLENGSDTDISVHTA 311 Query: 317 PRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALD 376 G P ++ + + + + G+L G L+ D + L+ TL+ QL +LA Sbjct: 312 EHGKKPPLEKYHDETFPIEYQNEKLGMLSLGFSDGTSLTGDDRTLLQTLIRQLGVSLAGA 371 Query: 377 RHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQ--- 433 + +E ++ L V++ER+ IA+ LHDSIAQ+L+ + +QV QM A E+ RE ++ Sbjct: 372 KQEEEKRLLAVLQERSLIAQGLHDSIAQALTFLNLQV---QMLETAFAENKREEAAENIG 428 Query: 434 -IRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVP 492 I+ + + +RELL FR +++ A+ ++ + G V+ ++ L Sbjct: 429 FIKTGVQECYEDVRELLLNFRTKISNKEFPEAVADLFARFTQQTGITVETVWENGSFLPT 488 Query: 493 SHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI---RSN 549 + + ++ I +E+LSN KH++A+ V T+++ + +T+QDNG G I + Sbjct: 489 QDEQLQMIFILQESLSNIRKHARATHVKFTLSEYGGRFTMTIQDNGQGFDTEKIGEPTGS 548 Query: 550 HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTF 589 H G+ IM++RA+ +R +R + GT V +T P+++ Sbjct: 549 HVGLHIMQERAKRIRAVLEIRSQAQQGTTVSLTGAPKESL 588 >UniRef50_Q1ZGB4 Nitrate/nitrite sensor protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGB4_9GAMM Length = 549 Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 142/561 (25%), Positives = 257/561 (45%), Gaps = 56/561 (9%) Query: 46 AINKAGSLRMQSYRLLAAVPLSEKDKPLI-KEMEQTAFSAELTRAAERDGQ--------- 95 +I+K G ++ +++LL A+ + PL+ E+E T A+L +++ + Sbjct: 26 SISKLGEFKINTFKLLYALQNDPEKTPLLLAEIENTIRPAKLLKSSWFNTHSLNENSALL 85 Query: 96 LAQLQGLQDYWRNELIPALMRAQNRETVSADVS--QFVAGLDQLVSGFDRTTEMRIETVV 153 LA+ Q +++ + AQN + A V F+ +++++ + + ++ V Sbjct: 86 LARWQSIEEAF----------AQN-DVAGAHVKLLYFIKSINRVIDQYQTLADQKMTLVH 134 Query: 154 LVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISG-RNEMAML 212 L + + +A +F + + + +P QL ++ + N +NE +L Sbjct: 135 LAEFIAFMLLACTGLFLYFYSKNYISEPINQLAKNVESIKKHQYD--VNFPHYKNEFGIL 192 Query: 213 GTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVL 272 + +M AE+ + + ++ +V +KT LE+ NQ ++FL +++L S L L Sbjct: 193 AQGMRDMYAEIQQLISQMKTQVHQKTQELENANQTIAFLLSISQQLGSVKLTSPVLYDAL 252 Query: 273 NGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKW 332 N L L+ + + E N+ F Q C C+ P+ G Sbjct: 253 NALVKQANLKRVCI-------ELNNGTF-IQSKSGCSGINCR---NSRFPIVINGKP--- 298 Query: 333 RLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERA 392 YG L + S +Q+ L+++ + L + ++ Q++++MEER Sbjct: 299 --------YGFLNYY---SENESPEQRALIESFSVLIARALCQQENVQQTQKILIMEERN 347 Query: 393 TIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLS--QIRNELNASWAQLRELLT 450 IARELHDSIAQSLS +K+Q + L Q E + L S I ++ ++AQLR LL+ Sbjct: 348 IIARELHDSIAQSLSFLKIQCTVLHQQVHQ-KEQQKALQSIHHIDEAISDAYAQLRSLLS 406 Query: 451 TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNA 510 TFRL T + A++ + + L ++Q IHLLQI REA+ NA Sbjct: 407 TFRLTATHSNFKEAVQMLISTLQKQTSAQITLKEFSTHFYSAANQQIHLLQIVREAIINA 466 Query: 511 LKHSQASEVVVT-VAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRV 569 +KH+ + V+ + DN + +++ D+G G+ + NHYG+ IM R+ + + Sbjct: 467 IKHADCQHIDVSCLLTPDNNIWISIIDDGKGITNTSAIENHYGISIMEQRSDEIGATFSI 526 Query: 570 RRRESGGTEVVVTFIPEKTFT 590 S GTEV + F +K T Sbjct: 527 LPLAS-GTEVKLIFPYKKQHT 546 >UniRef50_UPI00016987BE Periplasmic Sensor Signal Transduction Histidine Kinase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016987BE Length = 263 Score = 148 bits (373), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 90/233 (38%), Positives = 146/233 (62%), Gaps = 9/233 (3%) Query: 358 QQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ 417 QQ+L++T+ + + L + + + L ++EER+ IARELHDS+AQSLS +K+QVS L+ Sbjct: 12 QQRLLETVASHIAMAINLSQRVSQNRMLSLLEERSVIARELHDSLAQSLSYLKIQVSRLE 71 Query: 418 MQGDALPESSRELL---SQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSA 474 + + ++ +LL +R+ LN ++ QLRELLTTFRL+++E GL AL+ + EY Sbjct: 72 -KAVSEEQAKDDLLLISGVLRSALNGAYRQLRELLTTFRLRMSEAGLGAALDETVREYRE 130 Query: 475 KFGFPVKL-DYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN-DNQVKL 532 + G ++L D R P+ + IH++QI REALSN ++H+ A+ +V + + D V + Sbjct: 131 RGGLEIELIDRIANCRFSPNAE-IHVIQIIREALSNVIRHANATRALVKIECDMDGIVTI 189 Query: 533 TVQDNGC--GVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 V+D+G G+ E HYG+ IM++RA L + + ESGGT V+++F Sbjct: 190 LVEDDGVGIGIDEEGDMMQHYGLPIMQERANWLGAELMINEPESGGTRVLLSF 242 >UniRef50_C4KA07 GAF sensor signal transduction histidine kinase n=2 Tax=Betaproteobacteria RepID=C4KA07_THASP Length = 655 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 182/645 (28%), Positives = 278/645 (43%), Gaps = 121/645 (18%) Query: 25 IGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL---LAAVPLSEKDKPLIKEMEQTA 81 + LA +A++ ++ ++G+A AIN AGSLRM+ YR+ LA L D+ Sbjct: 30 VALAAIALTLFISWRLEGAAAAINDAGSLRMRLYRVAHHLARADLHTSDR--------QG 81 Query: 82 FSAELTRAAE---------------------RDGQLAQ-LQGLQDYWRNELIPALM---- 115 F+ +L + R+ + Q L G+ + W +L P L+ Sbjct: 82 FAGDLRARVDDFDRILGVLRRGDPSRPLFVPREAGIQQVLSGMSEEWSVQLRPILLAIAA 141 Query: 116 ---------------RAQNRETVSADVSQFVAGLDQLVSGFDRTTE-MRIETVVLVHRVM 159 RA R+ V D++ FV ++Q + R T +R V+LV Sbjct: 142 DPDPANLHRRGLEFDRAA-RDYVE-DINDFVLRMEQ---SYARNTNILRTSQVILV---- 192 Query: 160 AVFMALLLVFTIIWLRARLLQPWRQLLAMASAV---SHRDFTQRANISGRNEMAMLGTAL 216 AL ++ TI+ LR L R + + V DF R + ++E L Sbjct: 193 ----ALAVIGTILLLRFFFLTVIRPVFELHEGVKRMGQEDFDARVPVLSQDEFGELSAGF 248 Query: 217 NNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAP-----LC----ER 267 N M+A L Y LE+RV KT LE KN+ L L++ L R P LC ER Sbjct: 249 NRMAAHLQNVYDTLEERVVAKTRSLEEKNRELEILYEIVAFL--REPNDVDTLCKGFLER 306 Query: 268 LSPVLNGLQNLTLLRDIELR-----VYDT--DDEENHQEFTCQPDMTCDD--KGCQL--- 315 + + + L D+E R V+D DD + +E + C + +G L Sbjct: 307 VQKTMGASASSARLLDLESRNLCMIVHDGLGDDFLDREEVLACGECVCGEAAQGSGLSLT 366 Query: 316 --------------CPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQL 361 C R G R T + S G+ Q + +QL Sbjct: 367 LDVRNAALAVTRDACRRA----GFR-TVSATSITASKRALGVFNLYFDQPDAIGDADRQL 421 Query: 362 VDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD 421 ++ L +QL + R R+++L V EER +ARELHDSIAQ L+ + +QV QM Sbjct: 422 LEALGQQLGIAIENQRLHARERELAVSEERNLLARELHDSIAQGLAFLNLQV---QMLER 478 Query: 422 ALPESSRELLS----QIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFG 477 AL E+ +S +R + S+ +RELL FR ++ + L A+ A+ + + G Sbjct: 479 ALAENRAADVSTTVEMLRRGIQESYEDVRELLVHFRTRVEQQDLDAAIAAALRRLAEQTG 538 Query: 478 FPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDN 537 LD Q + +L I +EALSN KH+ AS V V V + + + +TV+D+ Sbjct: 539 IATDLDVQGDGAPLDPEAETQVLYIIQEALSNVRKHAGASTVSVGVRRGRDGLAVTVRDD 598 Query: 538 GCGVPENAIRSN---HYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 G G E+ S+ H G+ IMR+RA + G VR GTE+ Sbjct: 599 GVGFAEDRDASDSEAHIGLQIMRERAMRIGGRFAVRSSPGRGTEI 643 >UniRef50_A4G5M3 Putative Nitrate/nitrite sensor protein narX n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G5M3_HERAR Length = 672 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 174/636 (27%), Positives = 286/636 (44%), Gaps = 67/636 (10%) Query: 5 CLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAV 64 L P L N++ +++ + L+ + + L ++GSA AIN+AG +RMQSYRL + + Sbjct: 31 SLLPQRLSNKIVAVLIGFLLLALSAIGTTLMLSWQLEGSAAAINEAGGVRMQSYRLTSVL 90 Query: 65 P--LSEKDKP--LIKEMEQT--AFSAELTRAAERDGQ--------------LAQLQGLQD 104 L+E+ +P L EQ A A R D Q AQ+ + Sbjct: 91 ARLLNEQIEPDELRHNAEQQIRAIDATFARLQRGDPQRPLYLPPTNNIHTVFAQVV---E 147 Query: 105 YWRNELIP----ALMRAQNRETVSAD-----VSQFVAGLDQLVSGFDRTTEMRIETVVLV 155 W EL P L +AQ D + FVA ++ LV +R +E R+ + Sbjct: 148 RWDVELEPLAYAILQKAQPDRRPDWDRYLTQIDGFVADVNNLVQLIERDSETRMFWLRSW 207 Query: 156 HRVMAVFMALLLVFTIIWLRARLL-QPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGT 214 V+ V MAL+ T+I+L L+ QP +L ++ R + ++E L Sbjct: 208 QLVL-VAMALIGTVTMIYLMFLLIIQPVTRLQEGMQQMNGNKLGVRLPVESKDEFGQLTL 266 Query: 215 ALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAP---LCE----R 267 N M+ L SY LE RV++KTA LE +N+ L+ L+ + L P LC+ R Sbjct: 267 GFNQMADRLETSYNNLENRVRQKTAELEDQNRELALLYDSAAFLQRPQPMEMLCDGFLQR 326 Query: 268 LSPVL----NGLQNLTLLRD-IELRVYDTDDEENHQEFTCQP--DMTCDDKG-------- 312 ++ ++ L RD + + V+ +E + C D C + Sbjct: 327 ITQYFQADGGSVRVLEAARDNLHMVVHQGISKELVESEHCLKVGDCLCGEAAEKKISMVH 386 Query: 313 --CQLCPRGVLPVGDRG-TTLKWRLADSHTQY-GILLATLPQGRHLSHDQQQLVDTLVEQ 368 Q+ L G T+ +H Q+ G Q R + L++ L Sbjct: 387 NLQQMDQAHALQCHREGFATVSIFHIYAHEQHIGFFNLHFRQPRVFDKHEHALLEALGNL 446 Query: 369 LTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL--QMQGDALPES 426 L + R R++++ + EER +A+ LHDSIAQ L+ + +QV L +Q L E Sbjct: 447 LGVAIENIRLAMREREMAISEERNLVAQGLHDSIAQGLTFLNLQVQMLDDSLQKGRLKEV 506 Query: 427 SRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQL 486 + E++ +R +N S+ +RELL FR +L + L +L+ + +++ + G V Sbjct: 507 A-EIVPALRAGVNESYEDIRELLLNFRSRLIKGDLINSLQTTIDKFRRQSGITVNFVASG 565 Query: 487 PPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI 546 +P Q + ++ I +EALSN KH+ AS+V + + Q++ L++ DNG G + + Sbjct: 566 DGAPLPYEQQLQIMFIVQEALSNIRKHASASKVEIRL-QDNQDFSLSIHDNGGGFDADTL 624 Query: 547 RS---NHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 S +H G+ IMR+RAQ + V GT V Sbjct: 625 LSKGESHVGINIMRERAQRIHASFEVHSTPLQGTTV 660 >UniRef50_A5WD78 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WD78_PSYWF Length = 640 Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 83/218 (38%), Positives = 133/218 (61%), Gaps = 10/218 (4%) Query: 379 QERQQ--QLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSREL------ 430 Q+RQQ Q+I++EERATIARELHDS+AQSLS +K+Q + L+ + S +L Sbjct: 419 QQRQQEHQIILLEERATIARELHDSLAQSLSYLKIQTTILEKRLQHTHCDSPDLALVSDS 478 Query: 431 LSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRL 490 + ++++ L +++ LR+LL TFRL L + AL S EE++ K GF VK+ Q+ Sbjct: 479 IGKLKDGLTSAYQHLRDLLVTFRLSLNDDSFDEALHNSAEEFAKKGGFNVKVSNQVISLN 538 Query: 491 VPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ--NDNQVKLTVQDNGCGVPENAIRS 548 + + + ++++QI REALSN +H+ A V V + N L++ D+G G+ + ++ Sbjct: 539 LSASEQVNVIQIVREALSNICRHANAKNVTVNFGYIADSNDTLLSISDDGKGLSGSFDQT 598 Query: 549 NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 +H+G++IM++RA+SL G V E GT V F P+ Sbjct: 599 HHHGLMIMQERAKSLGGQLTVSNNEPTGTVVEARFSPD 636 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 68/259 (26%), Positives = 122/259 (47%), Gaps = 22/259 (8%) Query: 17 LIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL------------LAAV 64 LI+LL L+ SG+L Q A AIN AGS+RM +YR+ L A Sbjct: 17 LIILLFLGTALS----SGFLAWAAQNDAKAINTAGSIRMATYRMNFLLVANQSSAELRAA 72 Query: 65 PLS--EKDKPLIKEME--QTAFSAELTRAAERDGQLA-QLQGLQDYWRNELIPALMRAQN 119 +S ++ LI +M Q+ ++ +D ++ Q++ + W L+P L+ + Sbjct: 73 DISSVQQINQLIDDMNQRQSLLQHYQSQRTNKDTRIYRQIERIHQGWTQTLMPLLLARDS 132 Query: 120 RETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLL 179 A + ++ +D +VS E R L+ + M L+++ I LR ++L Sbjct: 133 VGFYKASLP-YIQQVDAVVSQLQYRNEQRQNRQQLLQLISMSLMILIMIGGIYELRKKVL 191 Query: 180 QPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTA 239 P ++L+ +A + R +++G E LG + N+M + + ++ LE+++ KTA Sbjct: 192 LPVKKLMQAKAAFTSGKLETRVHLTGYKEFEELGRSFNDMVSTIEQNKQFLERQIALKTA 251 Query: 240 GLEHKNQILSFLWQANRRL 258 L NQ+LS L+ + L Sbjct: 252 HLTQANQVLSLLYDFAKYL 270 >UniRef50_Q46R21 GAF:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase, dimerisation and phosphoacceptor region n=41 Tax=Burkholderiales RepID=Q46R21_RALEJ Length = 675 Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 170/610 (27%), Positives = 261/610 (42%), Gaps = 85/610 (13%) Query: 35 WLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDG 94 WL ++G+ AIN AGSLRM++ R+ + L+ + ++ + A L A R G Sbjct: 54 WLSWKLEGAGAAINDAGSLRMRANRVAIELGLANAGQAGARDAQIQALDGTL--AQLRKG 111 Query: 95 QLA-------------QLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGF 141 QL + W++EL P V A + FVA D+LV Sbjct: 112 NPVRPLFLPDEPAIHEQLDRVAYDWQHELRPLAQAGSGVAYVQA-LPAFVAEADRLVMLI 170 Query: 142 DRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRA 201 + + + + + L +A + V I L ++ P +L ++ R+F+ R Sbjct: 171 EHDSARKTDLLRLSQAGLAAIACVGTVAVIYLLYLWIILPVLRLQDGLRRMAAREFSLRL 230 Query: 202 NISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQIL-------SFLWQA 254 + R+E L N M+AEL + Y L RV KTA LE +N+ L +FL QA Sbjct: 231 PVETRDEFGTLNAGFNRMAAELQDLYQDLAARVASKTAELERQNRDLETLYDMAAFLNQA 290 Query: 255 NRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENH------------QEFTC 302 ER+ + +RV D + H + C Sbjct: 291 RDAEAMARGFLERVMGQFDADGG-------SVRVMDAQHGKLHLLASAGLPAALAESGNC 343 Query: 303 QPDMTCDDKGCQLCPR-GVLPVGD-RGTTLK-------------------WRLADSHTQY 341 M D C R GV+ + D R TT + +R+ Sbjct: 344 ---MAVDACHCGDATREGVVAIADLRRTTRRPLLPQPSPCTREGFTAIAAFRIESQRGAI 400 Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 G R L +QL+DTL + L L R +QL V+EER +A+ LHDS Sbjct: 401 GTFALHFHAPRELPPSDRQLLDTLAQHLGIALEHLRLSASARQLAVVEERNLVAQGLHDS 460 Query: 402 IAQSLSCMKMQVSCLQMQGDALPES----SRELLSQIRNELNASWAQLRELLTTFRLQLT 457 IAQ L+ + +QV Q+ GDA+ +RE++ +R+ + S+ +RELL FR +LT Sbjct: 461 IAQGLNFLNLQV---QLLGDAVDRDDLAEAREIVPMLRHGVEESYQDVRELLNNFRSRLT 517 Query: 458 EPGLRPALEASCEEYSAKFGFPVKL---DY--QLPPRLVPSHQAIHLLQIAREALSNALK 512 LRPA+E + E + + L D+ +LP L P Q + +L I +EALSN K Sbjct: 518 PGELRPAVEETVERFRRQCRTEATLVIDDHGNRLP--LQPEQQ-LQVLFILQEALSNVRK 574 Query: 513 HSQASEVVVTVAQNDNQVKLTVQDNGCGV-PENAIRSN--HYGMIIMRDRAQSLRGDCRV 569 H+ A+ V V++ + +L V+D+G G P R + H G+ IMR+RA L + Sbjct: 575 HAMAAHVTVSLCHG-HDFRLVVEDDGEGFDPAELGRDSEAHVGLNIMRERAARLHARLAI 633 Query: 570 RRRESGGTEV 579 R G + Sbjct: 634 DARPGRGVRI 643 >UniRef50_C7I506 GAF sensor signal transduction histidine kinase n=1 Tax=Thiomonas intermedia K12 RepID=C7I506_THIIN Length = 643 Score = 144 bits (364), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 172/637 (27%), Positives = 273/637 (42%), Gaps = 79/637 (12%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEK 69 TL ++AL + L + + W+ ++G A A+N AG LRM SY++ A Sbjct: 6 TLTAKIALFSGAFLLLSLMSIGATLWISWNLEGGAAAVNVAGQLRMLSYKV-ALAATDHD 64 Query: 70 DKPLIKEMEQTAFSAELTRAAE----------------RDGQLAQLQGLQDYWRNELIPA 113 D L +++ + L A D A Q LQ W + Sbjct: 65 DTQLSSDLQLIQDNLVLLHAGSPSRPLYVPWDGIIRQRYDAVRAHWQSLQPRWESA---- 120 Query: 114 LMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMA--VFMALLLVFTI 171 +Q +V+QFV +D VS + + + +A V + LL+F Sbjct: 121 ---SQAHPVPREEVNQFVTQIDAFVSSIEHRLDFWTTVLHAFQMGLAALVVIGALLMFYA 177 Query: 172 IWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLE 231 +L +L P +L A+ D++ R +I+ +E+ L N M+ +L Y LE Sbjct: 178 AYLF--VLDPVGRLSRGVQALEQGDYSARVDINTTDELGDLAIGFNRMAGQLQAVYDELE 235 Query: 232 QRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVL------------------- 272 +RV++KTA L + Q L+ L++ + L S+A + LS Sbjct: 236 ERVRQKTAALRTEQQRLAALYEVSA-LVSKAQSLDELSQSFVQVVRRIAGADAAALRWTD 294 Query: 273 NGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKW 332 + LL L ++E+ TC G Q+ L G L Sbjct: 295 ESARRYLLLASDGLPAVLAEEEQCLMSDTCFCGQAQHHGGPQIVQFHRLQ--PEGRALPG 352 Query: 333 RLADSHTQYGILLATLP---QGRHL-----------SHDQQQ--LVDTLVEQLTATLALD 376 R+A Y LL ++P Q R L S D+ Q L+DTL L A + Sbjct: 353 RVACERLGYATLL-SIPVRAQQRLLGEIDLFFHAEQSADEAQHALLDTLAGHLAAAMESL 411 Query: 377 RHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRN 436 R +++ V +ERA +ARELHDSIAQSL+ MK+Q LQ+ AL + Q+ + Sbjct: 412 RSAALEREAAVSQERAFLARELHDSIAQSLAFMKIQ---LQLLRTALQAGKVGKIEQVVS 468 Query: 437 ELNA----SWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVP 492 EL S A +RELL FR + E + PAL ++ +++ + G V L + + + Sbjct: 469 ELEVGVKESLADVRELLLHFRTRTQEQDIEPALRSTVQKFELQSGLSVDLVFHGHGQPLD 528 Query: 493 SHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN--- 549 I +L I +EALSN KH++A++ + V + + + V D+G G I + Sbjct: 529 PDVQIQVLHIVQEALSNIRKHAKATQARLVV-DSLPRWRFVVSDDGRGYDPEVIAQDGQA 587 Query: 550 HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 H G IMR+RA ++ G + + GG V + +PE Sbjct: 588 HVGQQIMRERAAAIGGHLSIEAQPKGGVRVTLE-LPE 623 >UniRef50_A9LZC9 Two-component system, NarL family, nitrate/nitrite sensor histidine kinase n=9 Tax=Neisseria RepID=A9LZC9_NEIM0 Length = 536 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 143/576 (24%), Positives = 247/576 (42%), Gaps = 80/576 (13%) Query: 53 LRMQSYRLL----AAVPLSEKDKPLIKEMEQTAFSAELTRAAERDG-------------Q 95 +RMQ+YRL P S+ D + F L R ++ D Sbjct: 1 MRMQAYRLAYMAGEGSPRSQIDNQV------DEFEKSLNRISQSDAIHPLIPSDTPLAYD 54 Query: 96 LAQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLV 155 L Q + D W+ ++P L R D+ +F ++ + + E + + Sbjct: 55 LIQSMLIID-WQAHILPPLQSY--RRPTQVDLYRFAGNIELFLQALENANE---KNTWWL 108 Query: 156 HRVMAVFMALLLVFTII---WLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAML 212 R M + LV +++ W + +++P + L A + R F G E + Sbjct: 109 RRFQWAIMLMTLVSSVLMLFWHQIWVIRPLQALREGAERIGRRCFDIPVPEGGTPEFKQV 168 Query: 213 GTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLH-SRAP------LC 265 G N M L Y LE +V E+T LE +NQ L+ L+Q R LH S P Sbjct: 169 GRCFNQMGGRLKILYDDLEGQVAEQTRSLEKQNQNLTLLYQTTRDLHQSYIPQQAAEHFL 228 Query: 266 ERLSPVLNGLQNLTLL---RDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCP--RGV 320 R+ P + L D+ + ++ D C L + Sbjct: 229 NRILPAVGADSGRVCLDGGSDVYVSIHHAD---------------CGTAASDLGKYHEEI 273 Query: 321 LPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQE 380 P+ + TL G LL + P G L D + L+ TL QL +LA + +E Sbjct: 274 FPIEYQNETL-----------GRLLLSFPNGISLDEDDRILLQTLGRQLGVSLAGAKQEE 322 Query: 381 RQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQ----IRN 436 ++ L V++ER IA+ LHDSIAQ+L+ + +QV QM A E+ RE ++ I+ Sbjct: 323 EKRLLAVLQERNLIAQGLHDSIAQALTFLNLQV---QMLETAFAENKREEAAENIGFIKT 379 Query: 437 ELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQA 496 + + +RELL FR +++ A+ ++ + G V+ ++ L + Sbjct: 380 GVQECYEDVRELLLNFRTKISNKEFPEAVADLFARFTQQTGTTVETVWENGTHLPTQDEQ 439 Query: 497 IHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI---RSNHYGM 553 + ++ I +E+LSN KH++A+ V T++++ + +T+QDNG G I +H G+ Sbjct: 440 LQMIFILQESLSNIRKHARATHVKFTLSEHGGRFTMTIQDNGQGFDTEKIGEPTGSHVGL 499 Query: 554 IIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTF 589 IM++RA+ +R ++ + GT V + + E++ Sbjct: 500 HIMQERAKRIRAVLKIYSQPQQGTTVSLAGVSEESL 535 >UniRef50_C0DXB9 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXB9_EIKCO Length = 632 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 150/618 (24%), Positives = 262/618 (42%), Gaps = 63/618 (10%) Query: 24 AIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFS 83 I +A ++ + L ++GSA AIN GSLR++S+R+ + + + + + ++Q Sbjct: 20 VIAVASISYTLLLSWRLEGSAAAINDIGSLRLRSFRIALLIRENAGAEEIEQRLQQYDSI 79 Query: 84 AELTRAAERDGQL---------AQLQGLQDYWRNELIPALMRA--QNRETVSADVSQFVA 132 + R +R L + L WR + PA A QNR + F++ Sbjct: 80 LDNVRHGDRSRPLFLPPDKVVWQRFNELDQQWRQNIRPAFQVAYQQNRPVTDKQLQPFLS 139 Query: 133 GLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAV 192 LD LVS ++T I + L + V + + F + L +++P + L +A+ Sbjct: 140 RLDNLVSAVEQTNTRYISWLRLFQSCLLVLVVMSSAFMVFLLYWWIIKPLQHLQQGVAAI 199 Query: 193 SHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLW 252 F + I E A + N MS+ L + Y+ LE+ V EKT L K+ L L+ Sbjct: 200 HDGQFGIQIPIDHSAEFARVDNGFNQMSSSLHQLYSHLEEEVLEKTRDLASKHHTLETLY 259 Query: 253 QANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQ---PDMTCD 309 +R L E L + + +R+ D + + Q PD Sbjct: 260 FFSRFLSQTQTTTEAAEVFLQKMLEMVAADAGSIRLIDF--KRQRMDLVSQINLPDSLQT 317 Query: 310 DKGCQ-----LCPRGVLPVGDRGTTLKW-RLADSHT------------------------ 339 + CQ LC V V D +++ R DSH Sbjct: 318 AEACQRFDDCLCGHAV--VHDDWQPIQFVREPDSHAFDTDNSECSRMGFQQLRIFKIQYK 375 Query: 340 --QYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARE 397 +G++ Q ++ +L + L Q ++ R + +QL V++ER IA+ Sbjct: 376 AQDFGMVTLYFKQKEPVAMADTELWEALCSQFGVVVSNLRLIDESRQLAVLQERNLIAQG 435 Query: 398 LHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQ----IRNELNASWAQLRELLTTFR 453 LHDSIAQ+L+ + +QV QM AL +E +++ I++ + + +RELL FR Sbjct: 436 LHDSIAQALTFLNLQV---QMLESALQNHEQEQINENLHYIKDGIQECYDDVRELLINFR 492 Query: 454 LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKH 513 ++ ++ + + + V L + + S Q + ++ I +E+LSN KH Sbjct: 493 TKINNKDFTEVVQTLTDRFQRQTQIGVHLHWHGNGPQLNSEQQLQVVFILQESLSNIRKH 552 Query: 514 SQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR----SNHYGMIIMRDRAQSLRGDCRV 569 SQA++V + N + ++DNG G ++ NH G+ IM +RAQ +R + Sbjct: 553 SQATQVDIRF-NNRQDFVMEIEDNGRGFNIERLKEQHSGNHVGLNIMHERAQRIRAQLSL 611 Query: 570 RRRESGGTEVVVTFIPEK 587 + G T V + E+ Sbjct: 612 HSK-PGSTRVTLNLPYEE 628 >UniRef50_B2JVQ4 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Burkholderia phymatum STM815 RepID=B2JVQ4_BURP8 Length = 605 Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 90/254 (35%), Positives = 149/254 (58%), Gaps = 17/254 (6%) Query: 341 YGILLA-----TLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIA 395 YG+L+A T + RHL L++T+ L ++ R +++ + EER IA Sbjct: 343 YGVLIAEGEPETRFELRHL-----YLIETIASVLAHAISNLSRDVRDRRMALFEERNAIA 397 Query: 396 RELHDSIAQSLSCMKMQVSCLQMQGDALPESSR----ELLSQIRNELNASWAQLRELLTT 451 RELHDS+AQSLS MK+Q++ ++Q PE S+ E+ IR +++++ QLRELLTT Sbjct: 398 RELHDSLAQSLSYMKIQLA--RLQAVLPPELSQSDIAEIARGIREGIDSAYRQLRELLTT 455 Query: 452 FRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNAL 511 FR + GL LE EE+ ++ + +D ++P + ++ +H+ QI REAL+N L Sbjct: 456 FRSPMHAHGLASTLEELAEEFGSRSEVQISIDNRVPRMRLSVNEEMHVAQIVREALTNVL 515 Query: 512 KHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRR 571 +H++A+ V + + + +++ D+G G+ +HYG+ IMR+RA+SL G V+ Sbjct: 516 RHARATTAQVQLMSDGRTMTVSIDDDGRGINRTEGDEHHYGLSIMRERARSLGGRLEVKP 575 Query: 572 RESGGTEVVVTFIP 585 E G+ VV+TF+P Sbjct: 576 AER-GSRVVLTFVP 588 >UniRef50_B9Z081 Multi-sensor signal transduction histidine kinase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z081_9NEIS Length = 645 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 168/610 (27%), Positives = 275/610 (45%), Gaps = 82/610 (13%) Query: 35 WLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAF-SAELTRAAERD 93 WL ++G A AIN AGSLRM++ RL V D L +E+ Q + + T A R Sbjct: 41 WLSWQLEGGAAAINDAGSLRMRATRLSLDVQ-RFHDGKLPREVVQNSIVRYDQTLAVLRR 99 Query: 94 GQLAQ-------------LQGLQDYWRNELIP---------------ALMRAQNRETVSA 125 G A+ + + D W + P ++ R Q+ + Sbjct: 100 GDSARPLLVPRTAKILLDFKNVADQWHGRIRPLGQAILAAGSEASPQSIARFQSMTSDYV 159 Query: 126 D-VSQFVAGLDQLV---SGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQP 181 D +++FVA ++ + + R ++ + + +V V ++M +LLV L P Sbjct: 160 DLINRFVADMEAYNARNTEYLRYCQLMLAALAVVGTVALIYMMMLLV----------LNP 209 Query: 182 WRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGL 241 +L ++ + +E A + N M+ LAE+ A LE+RV+ KTA L Sbjct: 210 LDKLHQGIQLLAEGQLDVSVPVESDDEFAQVSQGFNLMAQRLAEARATLEERVRAKTASL 269 Query: 242 EHKNQILSFLWQANRRLH---SRAPLCER-LSPVLNGLQ---NLTLLRDIELRVYDTDDE 294 + KN+ L+ L++ + L+ S LC+ L+ V+ + L D E + + Sbjct: 270 QQKNKELALLYEISAFLNQPQSLESLCQGFLAKVMAAYRADGGAVRLTDHEQGIVYVVAD 329 Query: 295 ENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGI-LLATLP---Q 350 + E + + C G LC R TL S ++ G +++ P Q Sbjct: 330 QGMPEALLKEE-HCMRVGDCLCGEVAEHSSSRVETLSVADNKSCSREGYRVISAFPITVQ 388 Query: 351 GRHLS----HDQQQLVDT-----LVEQLTATLALDRHQER----QQQLIVMEERATIARE 397 GR L H +Q ++ T L+E L LA+ +R +++L V+EER +A+ Sbjct: 389 GRSLGLFNLHYRQSVIMTPQQTRLLEVLGQNLAVAIENQRLFAKERELAVLEERNLVAQG 448 Query: 398 LHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQ----IRNELNASWAQLRELLTTFR 453 LHDSIAQ LS + +Q QM AL +ELL I + S+ +RELL FR Sbjct: 449 LHDSIAQGLSFLNLQA---QMLRQALQLGDKELLDDTVGLIETGIKESYDDVRELLNNFR 505 Query: 454 LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQ-LPPRLVPSHQAIHLLQIAREALSNALK 512 +L+E L A+ E + + G V+L + L L+P Q + +L I +E LSN K Sbjct: 506 SKLSE-SLMQAISTVLERFRRQTGIKVELRSEGLTVPLMPEQQ-LQILFILQEVLSNVRK 563 Query: 513 HSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN---HYGMIIMRDRAQSLRGDCRV 569 H+QA++VVV + + + +L ++DNG G + H+G+ IM++RA R+ Sbjct: 564 HAQATQVVVHLKDDGSAFELDIKDNGVGFAMATVAGKADTHFGLSIMKERAARAGVALRI 623 Query: 570 RRRESGGTEV 579 + GT V Sbjct: 624 SSQPGRGTSV 633 >UniRef50_C6XAG1 Histidine kinase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG1_METSD Length = 608 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 83/228 (36%), Positives = 137/228 (60%), Gaps = 1/228 (0%) Query: 360 QLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ 419 +LV+ + L+ + ++ ++ +++ERA IARELHDS+AQSLS MK+Q+ LQ Sbjct: 378 ELVEMTAQLLSMVMGTQNREQEGRRAALLDERAAIARELHDSLAQSLSFMKIQIFRLQSH 437 Query: 420 GDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFP 479 R +++++R L+ ++ +LRELL+TFR+ + GLR A++++ +E+ + Sbjct: 438 PQTQHADLRGIVNELRQGLDNAYRELRELLSTFRVHMDVRGLRFAIQSAIDEFMQRSNLS 497 Query: 480 VKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT-VAQNDNQVKLTVQDNG 538 + LD +L + ++ H+L + REALSN ++HS AS V V V Q++ V +T+ D+G Sbjct: 498 IALDNRLVNCRLTVNEEFHILHVIREALSNIVRHSGASTVTVALVYQSNGSVIVTIDDDG 557 Query: 539 CGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 G HYG IM++RA SL G+ V RR +GGT V + F P+ Sbjct: 558 IGYASKPGEPGHYGHSIMQERAYSLGGELAVLRRRTGGTRVRLVFTPQ 605 >UniRef50_A1W358 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=7 Tax=Burkholderiales RepID=A1W358_ACISJ Length = 638 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 167/632 (26%), Positives = 269/632 (42%), Gaps = 98/632 (15%) Query: 25 IGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSA 84 + LA + + W+ ++G A A+N+AG LRM R++ A + + P +T F+ Sbjct: 21 VALASIGFTLWVTWKLEGGAAAVNEAGRLRMNMLRMVLA---QQNESPQEFARLETRFNE 77 Query: 85 --ELTRAAE---------RDGQLAQLQGLQDYW---RNELIPALMRAQNRETVSADVSQF 130 EL R + D + + ++ W N+ A + E V A F Sbjct: 78 GLELLRTGDPARPLFVPWSDDTRERYEHIRRQWLLIENDWKAAAHYESSAEAV-ARADAF 136 Query: 131 VAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRAR----LLQPWRQLL 186 V LD V E++I + V + +FM L + + + A +L P +L Sbjct: 137 VLDLDSFVEAI----EIQIVRLTAVLHLFHLFMVALAIGSAVAFMALSYLLVLNPVTRLQ 192 Query: 187 AMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQ 246 + + D R + +E L N M+ L S+ LE++V+EKTA +E +NQ Sbjct: 193 QALARLRKGDLGTRLEVEADDEFGQLTAGFNLMAHALQTSHEDLERKVREKTATIEVRNQ 252 Query: 247 ILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDM 306 L+ L+ A L + A E L+ +Q + + + + DE N + D Sbjct: 253 RLAALY-AVSALAAEAGSLEELTQGF--VQQIRRVAECDAAAVRWSDEANERYVLLASDG 309 Query: 307 T---------CDDKGCQLCPRG----------VLPVGDRGTTL-KWRLADSHTQYGI--- 343 C G C + ++PVG G L R A T I Sbjct: 310 LPQSLVEHEHCVVTGACECGQAQGQARMRVIPIMPVG--GLQLPHCREAGFETVVSIPVQ 367 Query: 344 ----------LLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERAT 393 LL P LS + ++L+ T+ L ++ R +++ V +ER+ Sbjct: 368 MHQRLLGEVTLLYRSPL--ELSAEMRELLSTMAHHLATSMESLRASALEREAAVAQERSL 425 Query: 394 IARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNAS----WAQLRELL 449 IARELHDSIAQSL+ +K+Q L+ DA+ + + E + EL+ +A +RELL Sbjct: 426 IARELHDSIAQSLAFLKIQTQLLR---DAVAKDNTEARDRSMAELDTGVRECYADVRELL 482 Query: 450 TTFRLQLTEPGLRPALEASCEEYS-----------AKFGFPVKLDYQLPPRLVPSHQAIH 498 FR + + + AL A+ ++ A G P+ D Q+ Q +H Sbjct: 483 VHFRTRTQDEDIEAALRATLSKFEHQTGAATALSMAGHGLPLAQDVQI--------QVLH 534 Query: 499 LLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN--HYGMIIM 556 +LQ EALSN KH+ A V + V Q + + VQD+G G +++ + H G+ IM Sbjct: 535 ILQ---EALSNVRKHADARRVELRV-QRHPRWRFEVQDDGRGFDPDSVPPDSLHVGLGIM 590 Query: 557 RDRAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 R+RAQ + + R GG VV +P T Sbjct: 591 RERAQRIGAHLELVSRPGGGGTCVVLELPPTT 622 >UniRef50_B8GUD0 GAF sensor signal transduction histidine kinase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUD0_THISH Length = 550 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 120/469 (25%), Positives = 200/469 (42%), Gaps = 53/469 (11%) Query: 158 VMAVFMALLLVFTI---IWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGT 214 + ++F+ L T+ + + L+ P L A + R I E A L Sbjct: 70 IQSLFLVAGLAVTLTLPVLIYHHLITPLFHLRHWAQRARGGNLAARIPIPSTGEFAELAQ 129 Query: 215 ALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNG 274 +N ++ +L + V +T LE K+ L L+ +++ L + L+ L Sbjct: 130 DVNALTEQLQRLTREMRDEVSAQTERLEQKSHTLEVLYDVAASINTSRDLDDLLTRFLTS 189 Query: 275 LQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGD-------RG 327 L++ + R+ D H DD+ C R VLP+G G Sbjct: 190 LKHALGAQAATARLVTPD---GHMRLVANLGFEPDDQRC----RQVLPLGKCMCGRVADG 242 Query: 328 TTLKWR---------LADSHTQ--------------------YGILLATLPQGRHLSHDQ 358 L W+ +D TQ Y + L P+ HL+ D Sbjct: 243 GDLSWKADIRQCGRVTSDCDTQEDEPAMITIPLQHRGKTLGVYSLFLHEWPE--HLNEDM 300 Query: 359 QQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL-Q 417 L+ ++ L + R E Q+L ++EER +A ELHDS+AQ+L+ ++ +V L + Sbjct: 301 DNLLTSIGRHLGMAIEKARVDEEAQRLGIIEERTHLAHELHDSLAQTLATLRFRVRALDE 360 Query: 418 MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFG 477 DA E+ RE + QI++ LN + +LR L++ FR + G A+E E + G Sbjct: 361 TAQDASAETRRE-IDQIKDVLNRANVELRALISHFRAPMEPQGFVAAVEKMVETLRRETG 419 Query: 478 FPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN-DNQVKLTVQD 536 V L + PR +P+ +L+I +EAL N KH+QA V V + + + + + V+D Sbjct: 420 ISVYLQKEWRPRKLPAEMETEVLRIVQEALCNIRKHAQAQHVRVLLRNDAEGECMVMVED 479 Query: 537 NGCGV--PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 +G G+ E H G+ +M +RA L D R+ GT + + F Sbjct: 480 DGLGLQPAEQGAPGEHIGLSVMTERAARLDADFRIESEPGEGTRISLAF 528 >UniRef50_C5T4I9 GAF sensor signal transduction histidine kinase n=2 Tax=Acidovorax RepID=C5T4I9_ACIDE Length = 653 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 155/621 (24%), Positives = 265/621 (42%), Gaps = 91/621 (14%) Query: 25 IGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSA 84 + LA + ++ W+ ++G A A+N+AG LRM R++ V +E + + + Q S Sbjct: 36 VALASIGLTLWVAWKLEGGAAAVNEAGRLRMNMLRMVL-VQQTESPEEVQRHARQFDASL 94 Query: 85 ELTRAAERDGQL---------AQLQGLQDYW---RNELIPALMRAQNRETVSAD-----V 127 EL R + L + + ++ W R E L + R AD V Sbjct: 95 ELLRTGDPSRPLFVPWGADTRERFEEIRTTWGGLRKEWAVGLPPDRARSLAQADSFVHKV 154 Query: 128 SQFVAGLDQLVSGFDRTTEM-RIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLL 186 FV ++ ++G+ + ++ + + FMA+ + +L P QL Sbjct: 155 DGFVEAIEIQIAGWTAVLHIFQLSMMAVAIAAAITFMAVSYLL--------VLNPVSQLQ 206 Query: 187 AMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQ 246 + + D R + +E L N M+ L S+ LEQ+V+EKTA + +NQ Sbjct: 207 QAQARLRQGDLGVRLPVEADDEFGQLSAGFNLMAHALQASHEELEQKVREKTANIAVQNQ 266 Query: 247 ILSFLWQANRRLHSRAPLCERLSPVLNGLQNLT--LLRDIELRVYDTD-------DEENH 297 L+ L++ + L+ GL+ L ++ I RV D DE N Sbjct: 267 RLAALYEVSA-----------LASSATGLEALAQGFVKQIR-RVAGADAAAVRWSDEANE 314 Query: 298 QEFTCQPD-----MT----CDDKGCQLC--PRG-----VLPVGDRGTTLKWRLADSHTQY 341 + D MT C G +C P+ V+P+ T D+ Q Sbjct: 315 RYVLLAGDGMPVAMTEEEHCLHTGACMCGQPQSQARTRVIPIVPSTTLAFPHCRDAGFQT 374 Query: 342 GILLATLPQGRHL-------------SHDQQQLVDTLVEQLTATLALDRHQERQQQLIVM 388 + + Q R L + + + L++ + L + + R +++ V Sbjct: 375 MVAIPVQMQQRLLGEINLFFRSPTAHTDEVRDLLEAMTRHLASAMEGLRATALEREAAVA 434 Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQ---MQGDALPESSRELLSQIRNELNASWAQL 445 EER+ +ARELHDSIAQSL+ +K+Q L+ +GD + + ++ + +A + Sbjct: 435 EERSLLARELHDSIAQSLAFLKIQTQLLRDAVAKGDVVARDRS--MGELDVGVRECYADV 492 Query: 446 RELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKL---DYQLPPRLVPSHQAIHLLQI 502 RELL FR + +E + AL A+ ++ + G L + LP +P I +L + Sbjct: 493 RELLVHFRTRTSEEDIEAALRATLSKFEHQTGIATTLTMAGHGLP---LPPDVQIQVLHM 549 Query: 503 AREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN--HYGMIIMRDRA 560 +EALSN KHS A+ V + V ++ + V DNG G +A+ + H G+ IMR+RA Sbjct: 550 VQEALSNVRKHSGATRVELHVHRHPRW-RFEVLDNGTGFRVDAVPPDSLHVGLGIMRERA 608 Query: 561 QSLRGDCRVRRRESGGTEVVV 581 Q + +V G V + Sbjct: 609 QRIGAVVQVESSPGEGARVCI 629 >UniRef50_D2T798 Sensor for nitrate reductase system, protein histidine kinase (Acts on NarP and NarL) n=2 Tax=Erwinia pyrifoliae RepID=D2T798_ERWPY Length = 326 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 86/273 (31%), Positives = 140/273 (51%), Gaps = 14/273 (5%) Query: 319 GVLPVGDRGTTLKWR-LADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLA--L 375 GVL G + +W L+ H + P G L + + +++ L A LA L Sbjct: 57 GVLSAGKKAGQTRWHSLSLRHP-------SRPPGGKLRWQGARPLRPIIKSLAAMLANAL 109 Query: 376 DRHQERQQ--QLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQ 433 +R + +QQ L++ +ERATIA ELHDS+AQ L+ ++Q+ L+ + ++ ++++ Sbjct: 110 ERWRNQQQIHGLLIQQERATIAAELHDSLAQELTFQRIQLVRLRRAIEPDDTTALDIVAG 169 Query: 434 IRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPS 493 + L + QLRELL FRL + L ALE + + + L Q +L + Sbjct: 170 MEQSLTGASRQLRELLNNFRLTVAPASLAHALEQAVAPLHQQSSAHITLACQFSGQLA-A 228 Query: 494 HQAIHLLQIAREALSNALKHSQASEVVV-TVAQNDNQVKLTVQDNGCGVPENAIRSNHYG 552 Q IH++ I REAL NA++H+ A+E+ V + + +T++DNG G+ H+G Sbjct: 229 QQQIHVVHIVREALVNAVRHASATEISVGSRPLPQGGIAITIKDNGVGIASLEEPDGHHG 288 Query: 553 MIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 + IM +RA L G + R GGT V + F P Sbjct: 289 LNIMNERAARLNGTLLIERHAKGGTSVSLHFTP 321 >UniRef50_A9WFF8 Histidine kinase dimerisation and phosphoacceptor region n=3 Tax=Chloroflexus RepID=A9WFF8_CHLAA Length = 466 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 107/398 (26%), Positives = 176/398 (44%), Gaps = 53/398 (13%) Query: 226 SYAVLEQRVQ-----EKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLN------- 273 S+A+ ++R++ A L N+ L L++ N+R+ S A L E L + Sbjct: 68 SWAIHQERLRISNEARMLAALRESNERLELLYEINQRVASSATLDEVLDYAITLPARLVN 127 Query: 274 -GLQNLTLLRD----IELRVYDTDDEENHQEFTC-----------QPDMTCDDKGCQLCP 317 G + L+ + RV D E + T QP + GC Sbjct: 128 AGAATIVLMDEQGQPYTARVTGIDAGELERARTAFLLRLMTSPPDQPVVLSPHLGCNWAA 187 Query: 318 RGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ-----LVDTLVEQLTAT 372 VLP+ + D+H G + A L +G + +Q L+ T+ +LT Sbjct: 188 CLVLPLVEH---------DAHP-IGWIEAFLKEGPATLRETRQPVLQPLLATVAGELTEA 237 Query: 373 LALDRHQERQQQLIVMEERAT------IARELHDSIAQSLSCMKMQVSCLQMQGDALPES 426 + R ++R I ERA IAR+LHD +AQSL+ M+M++ + PE Sbjct: 238 VVNSRRRDRAIASIAAVERAISAERTRIARDLHDGVAQSLAFMRMRIDLWEDWLTQEPER 297 Query: 427 SRELLSQIRNELNASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDY- 484 RE + + L +LR + R +++ + G AL E++ + + V +D+ Sbjct: 298 LREEFATFKANLRRQIEELRRAIFALRPIEIGQLGFAGALRRFINEFAEQQDWDVSIDFA 357 Query: 485 QLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV-PE 543 +LPP L P + + + +EAL+N KH+QA V + + D + + V+D+G G P Sbjct: 358 ELPPDLPPVLE-LAAFRFVQEALNNVAKHAQARRVWIKLGVRDQGLIIHVRDDGVGFNPG 416 Query: 544 NAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 + H G+ MR+RA +L G C + R GTEV V Sbjct: 417 EEPPAGHLGLRQMRERATALDGQCMIMSRPGDGTEVRV 454 >UniRef50_C5SBA0 Histidine kinase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SBA0_CHRVI Length = 554 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 125/240 (52%), Gaps = 9/240 (3%) Query: 350 QGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCM 409 QGR D +L+ T+ L +A R +L ++EER +A ELHDS+AQ+L+ + Sbjct: 297 QGRE---DILELLFTVGHHLGVAIAKQRSDAEAHRLSIVEERNALAHELHDSLAQTLASL 353 Query: 410 KMQVSCLQ--MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEA 467 + Q L + G +P +R L++IRN L+ + +LRELL +FR L GL PAL Sbjct: 354 RFQCRMLDDSLAGCPIPAEARNDLARIRNGLDEAHTELRELLASFRAPLDRRGLVPALAK 413 Query: 468 SCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEV-VVTVAQN 526 + + G V P + + + + LL+IA+EAL+N KH+QA V V+ ++ Sbjct: 414 LTQRLGRETGTHVLFQNDSRPFELSATEELQLLRIAQEALANIRKHAQAHTVRVLLTRES 473 Query: 527 DNQVKLTVQDNGCGV-PENAIR--SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + L ++D+G G P +A G+ I+ +RA+ + + R+ GT V V F Sbjct: 474 GGRHVLLIEDDGVGFSPPDAQSPPGERIGLSILEERARRIGAELRIESEPGEGTRVEVVF 533 >UniRef50_Q5MJZ2 Nitrate/nitrite sensor protein n=1 Tax=Methylophaga aminisulfidivorans RepID=Q5MJZ2_9GAMM Length = 389 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 70/237 (29%), Positives = 120/237 (50%), Gaps = 14/237 (5%) Query: 349 PQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQ---- 404 P + L + +TL + L A H E + + + ERA A ELHDS+AQ Sbjct: 151 PSAKQLKWKTSSIENTLYKGLQAWY----HSESKLKKALESERAMYAAELHDSLAQVLGY 206 Query: 405 -SLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRP 463 L +K+ C Q + +L + +L S + ++ Q REL+T+ RL + L Sbjct: 207 LRLKSLKLDKLCQQDEFSSLKPITEDLASYTQ----CAYHQTRELITSSRLTMQSDNLSQ 262 Query: 464 ALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEV-VVT 522 + S +E+ + +LD +LP ++ Q++ +L I RE+LSN ++HS A+ VV Sbjct: 263 GVINSIKEFEHQSAIVFELDNRLPLNMLSPQQSMQMLYIVRESLSNIVRHSHATHARVVL 322 Query: 523 VAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 + + + + + ++DNG G+ A RS+ +G+ IM++RA + + R GGT V Sbjct: 323 LLKTSSLIHIHIEDNGTGINPEAARSDSFGLQIMKERADRIGASLVINNRPEGGTRV 379 >UniRef50_C0DXM5 Sensor protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM5_EIKCO Length = 619 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 121/435 (27%), Positives = 183/435 (42%), Gaps = 46/435 (10%) Query: 174 LRARLLQPWRQLLAMASAVSH-RDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQ 232 LR +L+P L + ++H R T+ A + +E + N M+ L E YA LE Sbjct: 193 LRQVVLRPLGTLYQAMNQITHGRLGTRIAGSNSGDEFEAVADGFNRMADNLQEMYAHLED 252 Query: 233 RVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCE----------RLSPVLNG-------- 274 +V EKTA L + L+ LH ++ E RLS G Sbjct: 253 KVAEKTAALSRQKSEWEMLYYVTSYLHKQSFGSEVEQAFLERMLRLSHSGGGGIFWLAEK 312 Query: 275 ----LQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTL 330 ++ LL + R+ T E E M +G + ++P+ G Sbjct: 313 GFTTACDIGLLEGLAERLPHTHTAEQESEAGNMVWM----QGEEGALVALVPIYALGGFQ 368 Query: 331 KWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEE 390 W L + P LS L+ L QL +QQ V+EE Sbjct: 369 GW-----------LALSKPTVPLLSAQNTGLMRLLCTQLGIARENAAMTLLKQQNAVLEE 417 Query: 391 RATIARELHDSIAQSLSCMKMQVSCLQMQGDALPE--SSRELLSQIRNELNASWAQLREL 448 R+ IAR LHDS+AQSLS + M+ L + LP+ S R+ + IR+ + + +REL Sbjct: 418 RSRIARSLHDSLAQSLSFINMRFQMLS-KNKLLPDDKSVRDNIEMIRDGIQYCYEDVREL 476 Query: 449 LTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS 508 L FR + + + E + G PV L L+ S Q L I +EALS Sbjct: 477 LDHFRAKPQYGNFAETVRSVIERSRKQAGIPVVLHISGGDCLLNSEQQTQALFILQEALS 536 Query: 509 NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV-PEN---AIRSNHYGMIIMRDRAQSLR 564 N KH+ A + V + +N + + V+D+G G PE+ A H G+ +M +RA+ + Sbjct: 537 NIRKHADAQQAEVLL-ENGDGFTIIVRDDGQGFDPESRAEAEPGQHIGLSVMHERAEKIG 595 Query: 565 GDCRVRRRESGGTEV 579 + +R R GTEV Sbjct: 596 AEISIRSRPGSGTEV 610 >UniRef50_Q7NE94 Glr3986 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NE94_GLOVI Length = 655 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 27/239 (11%) Query: 360 QLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ 419 +L L Q T + L R E+ ++ V+EER +ARELHD++ Q L+ + +Q+ Sbjct: 429 ELAQALAHQATLAVQLTRLAEQGRRSAVLEERNRMARELHDTLMQGLAGIVVQLQAATDA 488 Query: 420 GDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPG-LRPAL------------- 465 G A P R+ + + R S A+ R + R QL E G L AL Sbjct: 489 GVADPLDGRDHIDRARTLARRSLAEARRSVRALRPQLLEQGDLGQALADLLQQSIYDNHT 548 Query: 466 EASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ 525 EA CE F P + + QL L+IA EALSNAL+H++A+ V V + Sbjct: 549 EARCEVRGTPFALPAEAENQL-------------LRIAGEALSNALRHARANRVHVELDY 595 Query: 526 NDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 QV+L V D+G G + + ++ +G++ MR+RA+ + D R+ GT V VT + Sbjct: 596 ERPQVRLVVADDGRGFDPDRVGTDRFGLVGMRERAERIGADLRLESVPGQGTRVAVTLV 654 >UniRef50_Q3SG40 GAF Sensor Signal Transduction Histidine Kinase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SG40_THIDA Length = 415 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 73/253 (28%), Positives = 127/253 (50%), Gaps = 17/253 (6%) Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 G+ L +G + D + L ++ E L L R ++ +M ER +A ++HDS Sbjct: 155 GVYNLFLEEGHVVPEDVRLLFRSISEHLGIALENARLTRENMRISLMNERQMLANQIHDS 214 Query: 402 IAQSLSCMKMQVSCLQ--MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEP 459 +AQ+L+ KM+++ L M+ + +++R L + ++ ++A LR+L+T +R ++ Sbjct: 215 LAQTLAYAKMRLTVLSDAMRHEDYAKANR-FLGDVEEAVDLAYADLRDLITQYRDRINPR 273 Query: 460 GLRPALEASCEEYSAKFGFPVKL-----DYQLPPRLVPSHQAIHLLQIAREALSNALKHS 514 GL PA++ + + K V D L P + I + I +E+L N KH+ Sbjct: 274 GLVPAIQELAKGFRKKANADVDFLNLVQDVTLTP-----DEEIQVFHIIQESLYNIAKHA 328 Query: 515 QASEVVVTVAQNDNQVKLTVQDNGCGV----PENAIRSNHYGMIIMRDRAQSLRGDCRVR 570 +A VV+T + Q + V D+G GV E++ +G+ IMR+RA L G V Sbjct: 329 RARHVVITFDLENGQYIVNVADDGVGVQKKHDESSTLGKSFGLTIMRERAARLNGKLVVE 388 Query: 571 RRESGGTEVVVTF 583 R +GGT V + F Sbjct: 389 SRPAGGTVVRLVF 401 >UniRef50_Q2Y9N2 Periplasmic sensor signal transduction histidine kinase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y9N2_NITMU Length = 692 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 113/460 (24%), Positives = 206/460 (44%), Gaps = 39/460 (8%) Query: 123 VSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPW 182 + A ++QF+ LD +++ E +L+ V+ F + R +L P Sbjct: 193 IMAPINQFMLELDTRTRNKLSNLQLKFEQQILLILVVLCFALFFATLATFYTRRNILLPL 252 Query: 183 RQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLE 242 L S ++ +++ R IS RNE+A LG N+M AE E + ++V+E L Sbjct: 253 DYLRRQVSGIAQGNYSTRCAISTRNEIAELGAGFNSM-AEAIEHEIIKLRQVEE---SLR 308 Query: 243 HKNQILSFLWQANRRLHSRA--PLCERLSPVLNGLQNLTLLRDIELRVYD----TDDEEN 296 + + ++ + R + S + +C+ ++ L L +++ + +D Sbjct: 309 ERLKEINCFYSIRRGMESSSLEEVCDTIATELIAAMQFPHLAGVKIEMDGKELVSDPYHG 368 Query: 297 HQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSH 356 + Q +T + RG + + RG + L + ++ L GR L H Sbjct: 369 NHVHELQKQITVHGE-----IRGWIKLFYRGDRF-FLLPEEQNLIDVIGDDL--GRWLEH 420 Query: 357 DQQQLVDTLVEQL-----TATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKM 411 QQ LVEQ A H ER ++ E+R IARE+HD + Q L+ + + Sbjct: 421 -QQTEARVLVEQELRVRDAAIREFAAHLERMRE----EDRKYIAREIHDELGQLLAALHL 475 Query: 412 QVSCLQM---QGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEAS 468 ++S L+ G E+ R ++++ + S + E L L L G+ AL Sbjct: 476 EISLLRSAKDHGSERLETIRHNMAELVEKAGQSVHNVAEHLRPASLGL---GIESALTKL 532 Query: 469 CEEYSAKFGFPVKLDYQLP--PRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN 526 E+ G + D +LP P + Q + + +I +E+L+N +HS A+ V + + + Sbjct: 533 TSEFKKHTG--IYCDLRLPEEPVNLDEDQTVAIFRIVQESLTNVTRHSGANRVEIRLFRE 590 Query: 527 DNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRG 565 ++V + + DNG G PE+A + +G++ MR+RA +LRG Sbjct: 591 KDEVIVEICDNGRGFDPESAKKGKSFGLVGMRERAAALRG 630 >UniRef50_UPI00016AFAA4 response regulator/sensory box histidine kinase n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AFAA4 Length = 672 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 14/209 (6%) Query: 384 QLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWA 443 Q I EE A IARELHD Q L+ +KM V+ L+ + A PE L+S RN+L++ +A Sbjct: 458 QKIREEEMARIARELHDDFGQQLTALKMAVTLLEHKKPAGPE---RLIS--RNDLSSIYA 512 Query: 444 QLRELLTTFR--------LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQ 495 + +L+ + R L + GL PA++ EE+SA++ V Sbjct: 513 LIDQLINSVRRFAADLRPAMLDDLGLIPAIDWLIEEFSARYHVHVTRHIDAQAIHFNRES 572 Query: 496 AIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG-VPENAIRSNHYGMI 554 + + +I +EAL+N +HS A+EVV+ + ++D+ + + DNG G V ++++ +G++ Sbjct: 573 RVGVFRIVQEALTNVARHSAATEVVIDITRDDSHCIVRIADNGRGAVRDSSLGRRSFGLL 632 Query: 555 IMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 MR+RA L GD ++R G + VT Sbjct: 633 GMRERAALLGGDTQIRTSPGAGFVLTVTL 661 >UniRef50_D1CB59 GAF sensor signal transduction histidine kinase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CB59_THET1 Length = 464 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 132/245 (53%), Gaps = 10/245 (4%) Query: 343 ILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSI 402 + +A R + + ++ + Q + R E+ + L + EER IARE+HDS+ Sbjct: 197 LFVAGKESAREFTEEDEETLARFATQAALAIENARLHEQVKALAIAEERERIAREMHDSL 256 Query: 403 AQSLSCMKMQVSCLQM--QGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEP 459 AQ L+ + + QM + L ++S+ L SQ+ + ++++ +RE + R Q Sbjct: 257 AQVLTYVTTKGHATQMLLERGELDKASKNL-SQLVDAARSAYSDVREQILALRTSQERNR 315 Query: 460 GLRPALEASCEEYSAKFGFPVKLDYQ--LPPRLVPSHQAIHLLQIAREALSNALKHSQAS 517 G + +++ + G PV+LD Q L RL P+ + +++I +EALSN KHS A+ Sbjct: 316 GFIDVIREYAQKWQDQSGIPVELDIQQGLNIRLTPTTD-LQVIRIVQEALSNIRKHSGAT 374 Query: 518 EVVVTVAQNDNQVKLTVQDNGCGV-PENAIRSNH--YGMIIMRDRAQSLRGDCRVRRRES 574 + +T+ + D+++ +T++DNG G P + RS+ +G+ +MR+RA+S+ + + Sbjct: 375 QAWITIYKRDDRLVVTIKDNGAGFDPSSLTRSDFPRFGLAMMRERAESVGAELNIDTGPR 434 Query: 575 GGTEV 579 GTE+ Sbjct: 435 QGTEI 439 >UniRef50_C3XBQ9 DNA-binding response regulator n=2 Tax=Oxalobacter formigenes RepID=C3XBQ9_OXAFO Length = 225 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 116/213 (54%), Gaps = 9/213 (4%) Query: 378 HQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNE 437 HQER ++ +ER IARE+HD + Q L ++++V+ L+ + E E + ++ + Sbjct: 19 HQERIRE----DERKRIAREIHDELGQRLLALRIEVTLLKQETFDSREKRSERIDEVLGQ 74 Query: 438 LNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAI 497 L+++ +R L+ R + + GL +L+ ++++ + G + V +A Sbjct: 75 LDSTVKSVRNLINNLRPAVLDLGLVASLDWQAKDFTRRNGIECVFETHDENLEVDDERAT 134 Query: 498 HLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS-NHYGMIIM 556 L ++ +EAL+N +KH++AS+V V + ND+ + L + DNG G+P+ R YG+ + Sbjct: 135 VLFRVLQEALTNIVKHAKASKVSVKLDGNDDTLVLKISDNGIGMPKVRNRKIKSYGLAGI 194 Query: 557 RDRAQSLRGDCRVRRRESGGTEVVVTF-IPEKT 588 R+R L G+ R+ +G T +TF IP KT Sbjct: 195 RERIGMLNGEFRI---ATGDTGTTLTFRIPLKT 224 >UniRef50_UPI0001692E35 hypothetical protein Plarl_02603 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692E35 Length = 277 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 113/208 (54%), Gaps = 16/208 (7%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQG-DA----LPESSRELLSQIRNELNASWA 443 +ER I+RELHD +Q+L+ + + L + DA L +SRE+ + I E+ Sbjct: 61 DERKRISRELHDETSQALTSFMVTMRVLANEAKDAEQQELLNTSREIAASILREIRDLAV 120 Query: 444 QLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIA 503 +LR + L + GL PA++ +++ K+G V L + S A+ L +I Sbjct: 121 ELRPPI------LDDMGLIPAIKKYIQKFEEKYGIAVVLSAPEEDIAIDSRTAVALYRIL 174 Query: 504 REALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP----ENAIRSNHYGMIIMRDR 559 RE+L+N +KH+ A+ +V+ + D+ ++LTV DNG G+ E A R N G+ M++R Sbjct: 175 RESLTNVVKHTAATRIVIGLRLADHCIQLTVHDNGHGIQQEDFERARRQNRIGLYGMKER 234 Query: 560 AQSLRGDCRVRRRESGGTEVVVTFIPEK 587 A+ L G VR GGTE++V+ IP K Sbjct: 235 AELLGGSFFVRTTNIGGTELIVS-IPLK 261 >UniRef50_C8NE28 Sensor histidine kinase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NE28_9LACT Length = 355 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 4/207 (1%) Query: 380 ERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELN 439 E ++ ++ +ER IARELHDS++Q L M +S L + E ++ L+ I + L+ Sbjct: 142 EETKEQVIEQERRRIARELHDSVSQQLFAAMMMISALNERKQHFDEKEQKQLAMIEHVLS 201 Query: 440 ASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIH 498 + +++R LL R + L L+ +E E K +K+ + + +P H Sbjct: 202 QAQSEMRALLLHLRPISLENKSLKSGIEGLLVELQTKV--QMKIHWDIEDVTLPEGVEDH 259 Query: 499 LLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRD 558 L +IA+E LSN L+HS A + V + Q D+ V ++D+G G + I + YG+ M++ Sbjct: 260 LFRIAQELLSNTLRHSHAKHLEVYLRQKDSNVIFKIEDDGVGFNVDDIHTGSYGINNMKE 319 Query: 559 RAQSLRGDCRVRRRESGGTEVVVTFIP 585 R Q L G ++ + GT + + IP Sbjct: 320 RVQGLGGQVKIVSFPNQGTTIEIK-IP 345 >UniRef50_B4CYV7 Histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYV7_9BACT Length = 694 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 117/222 (52%), Gaps = 15/222 (6%) Query: 374 ALDRHQERQQQLI--------VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPE 425 AL R RQ ++I +EERA +ARE HD++ Q + +++Q+ ++ + P Sbjct: 464 ALGRRVRRQTEVIRQKIQREGALEERARLAREFHDTLEQQFTGIRLQLEAVKSKFGEAPA 523 Query: 426 SSRELLSQIRNELNASWAQLRELLTTFRLQLTEP-GLRPALEASCEEYSAKFGFP-VKLD 483 + E L R+ + S + R + R + E L ALE + A G P ++ Sbjct: 524 EAEEYLDVARSLMRHSHDEARRTVWDLRADVLEQHDLSTALEKTVA--GATNGTPRARVA 581 Query: 484 YQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPE 543 PR +P HLL+I +EA++NA+KH++ASEV + + + ++L V+D+GCG Sbjct: 582 VSGQPRRLPGWMENHLLRIGQEAVTNAIKHARASEVHIELDYRPDVLQLRVRDDGCGFDA 641 Query: 544 N---AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVT 582 N A H+G++ M++RA+ +RG +V + GT + VT Sbjct: 642 NDTSASDRGHFGLLGMKERAEKIRGRLQVLSTLAAGTMIEVT 683 >UniRef50_C6P056 GAF sensor signal transduction histidine kinase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P056_9PROT Length = 407 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 74/230 (32%), Positives = 115/230 (50%), Gaps = 17/230 (7%) Query: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 L+ TL+E + AT R +R++ +++ER +IA E+HDS+AQ+L+ +M + L Sbjct: 181 LLGTLLEHIKAT----REAKREE---LLKERQSIANEIHDSLAQTLNYARMNTTLLS--- 230 Query: 421 DALPESSRELLSQ----IRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKF 476 DA+ ++ + ++ I L +R L+T FR + GL AL+ E++ + Sbjct: 231 DAVRNNNEVMATKYTRDIDEALEIGQKTVRTLITDFRSDMDPAGLLQALQTLSEQFRRQH 290 Query: 477 GFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQD 536 + ++ +P I I REALSN KHS AS + V TV+D Sbjct: 291 NIVLHCSIRVADLDLPLEHEIQAYHIVREALSNIAKHSNASHARLIVDHLCGYYVFTVED 350 Query: 537 NGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 NG G HYG+IIMR+RAQ + G+ +V + GT V F PE Sbjct: 351 NGVGTFSPV--EGHYGIIIMRERAQRIGGEIKVESTKGLGT-CVQLFFPE 397 >UniRef50_C6CGT0 PAS/PAC sensor signal transduction histidine kinase n=11 Tax=Enterobacteriaceae RepID=C6CGT0_DICZE Length = 546 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 71/263 (26%), Positives = 140/263 (53%), Gaps = 20/263 (7%) Query: 333 RLADSHTQYGILLATLPQGRHLS---HDQQQLVDTLVE-QLTATLALDRHQERQQQLIVM 388 R Q G L++ L GR ++ + +++L D+ ++ +L A RQ+++ Sbjct: 296 RCVPEFDQRGKLISILTVGRDITAIRYAEKKLEDSHMQLRLLA---------RQREISRE 346 Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNEL---NASWAQL 445 EER IARE+HD + Q L+ M+M +S ++MQ + +L+Q++N + + + + Sbjct: 347 EERKHIAREIHDELGQHLTSMRMSLSLMRMQ---FARDNPHMLTQLQNLMALSDKTIQVV 403 Query: 446 RELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 R + T R + + GL PALE +++ ++ P L P ++ A ++ +E Sbjct: 404 RHVATRLRPNVLDMGLTPALEWLRDDFIRQYRCPCLLHAPEPEVVLNDECATAAFRVVQE 463 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRG 565 +L+N +H++A++VV+++ + + L+V DNG G + N +G++ M++R + L G Sbjct: 464 SLTNIARHAEATQVVISLENREGLIVLSVHDNGKGFDAQTRKPNAFGLMSMKERGRMLGG 523 Query: 566 DCRVRRRESGGTEVVVTFIPEKT 588 + + + GT V +TF P+ T Sbjct: 524 EVVIESQPGAGTLVRLTF-PQDT 545 >UniRef50_B9TQ72 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TQ72_RICCO Length = 249 Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 128/252 (50%), Gaps = 16/252 (6%) Query: 332 WRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEER 391 WR S + I+L + + RH+ H + Q + QL+A L Q I EER Sbjct: 12 WR--GSEPLHTIILRDVTE-RHMVHQKLQRSRDQLRQLSAAL----------QTIREEER 58 Query: 392 ATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTT 451 IARELHD + Q L+ ++M +S LQ G E +R L++ + + L + A LR + T Sbjct: 59 TYIARELHDDLGQILASLRMDLSLLQKDGTGTAE-ARRLMAGMESNLLTAIASLRRIATN 117 Query: 452 FRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNA 510 R + L E GL AL+ +++ + G P L + + + +I +EAL+N Sbjct: 118 LRPRALDEGGLYFALQGLRDDFVERHGIPATLFADEAELRLDDAASTAIFRIVQEALTNI 177 Query: 511 LKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP-ENAIRSNHYGMIIMRDRAQSLRGDCRV 569 +H+ AS V + + + + ++ + ++D+G G+ E+ ++ G+I MR+R ++ GD + Sbjct: 178 ARHANASHVTMNLYRLNGELLIQIRDDGRGIKAEDMEKAESLGLIGMRERVWAMNGDITI 237 Query: 570 RRRESGGTEVVV 581 E GT + + Sbjct: 238 SSEEPPGTRIDI 249 >UniRef50_B3E9K4 Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Geobacter lovleyi SZ RepID=B3E9K4_GEOLS Length = 395 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 113/201 (56%), Gaps = 5/201 (2%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLREL 448 +ER +IAR++HD + Q+L+ M ++++ + + + + R L ++ +++A+ ++ + Sbjct: 192 DERRSIARDIHDDLGQTLTAMHLEITAMLHADNVIDLTPR--LCDLKKQVDAAIGTVQRI 249 Query: 449 LTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 ++T R Q L E GL ALE+ +E + L + A L ++A+E+L Sbjct: 250 ISTMRPQVLEELGLEAALESLAQEVRKRTNITCVTSCTLAGEPISQEVASCLYRVAQESL 309 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPE-NAIRSNHYGMIIMRDRAQSLRGD 566 +N +HS+A++V++TV + D ++L ++DNG GV E SN +G++ MR+R G Sbjct: 310 TNVFRHSKATKVLLTVRRRDGWLQLQIRDNGVGVSEAQTAASNAFGVMGMRERVARCGGS 369 Query: 567 CRVRRRESGGTEVVVTFIPEK 587 + R GGT +V +PEK Sbjct: 370 FSISPRVGGGT-IVEAQVPEK 389 >UniRef50_D2SEJ2 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SEJ2_9ACTO Length = 372 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 114/219 (52%), Gaps = 4/219 (1%) Query: 366 VEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPE 425 VE A L + + ++L ER +AR++HD + L+ ++MQV + Q + PE Sbjct: 151 VELAEANEQLRGYAAQAEELATTRERNRLARDIHDGLGHHLTVVQMQVQAARAQLSSDPE 210 Query: 426 SSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQ 485 + +L++ + + + + A++R + R T P LR ALEA E+SA G P L+ Sbjct: 211 RADAVLAKAQQQASDALAEVRRSVAALRGPRTAPPLRVALEALTAEFSAA-GVPAPLEVV 269 Query: 486 LPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ-NDNQVKLTVQDNGCGVPE- 543 R +P+ L + A+E L+N KH+ AS VT+ +D V+L V+D+G G+P Sbjct: 270 GTERPLPAEAEESLFRSAQEGLTNVGKHATASSARVTLTYGDDGTVRLRVRDDGRGLPAG 329 Query: 544 -NAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 + +G++ +++RA G V GGTE++V Sbjct: 330 GHGPYPGGFGLVGLQERAARAGGQLSVASVPGGGTELLV 368 >UniRef50_C3K8H6 Putative two-component system, sensor kinase n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K8H6_PSEFS Length = 403 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 80/266 (30%), Positives = 127/266 (47%), Gaps = 23/266 (8%) Query: 312 GCQLCPRGVLPVGDRGTTLKWRLADSHTQYGI--LLATLPQG----------RHLSHDQQ 359 GCQ R P D T + Q G+ L+ LP+G R + Sbjct: 106 GCQAVAR--CPWRDASVTDAPQACGPCRQRGVHRLVCALPEGEKGALLLDTPRRAGTSWR 163 Query: 360 QLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ 419 ++++ + + T+ L H QQ+ +ARELHDS+AQ L + Q LQ Q Sbjct: 164 RILEEAAQAVGVTVRLRCHNREQQRKQATSRHGALARELHDSVAQQLGYLSFQAHGLQSQ 223 Query: 420 -GDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGF 478 G+ + LSQ++ Q+REL+T+ RL + LR AL S E+S + Sbjct: 224 LGEPALQDLCTGLSQLQR-------QVRELITSARLTMDGRSLRQALADSVAEFSRRCII 276 Query: 479 PVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN-DNQVKLTVQDN 537 +LD +L + + +LQI REAL+NA++HS A V + + Q + ++V+D+ Sbjct: 277 VFELDNRLADDALSPETELQILQIIREALTNAVRHSHARHVRIELRQTQEGDASVSVEDD 336 Query: 538 GCGVPENAIRSNHYGMIIMRDRAQSL 563 G G+ NH+G+ I+R+RA S+ Sbjct: 337 GIGLIPACDEHNHFGLAIIRERAASI 362 >UniRef50_Q0A821 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A821_ALHEH Length = 446 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 115/223 (51%), Gaps = 11/223 (4%) Query: 373 LALDR-HQERQQQLIVME-ERATIARELHDSIAQSLSCMKMQVSCLQMQ--GDALPESSR 428 LA++R +E + +L +E ER+ I ELHD +AQ L+ + ++V L+ G P R Sbjct: 213 LAMERIRRESEARLQSLEQERSQITHELHDCLAQRLAALGLEVRNLEASHGGGRAPGGLR 272 Query: 429 ELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPP 488 L +R L+ ++ +LR+L+ FR+ L GL PAL+ + G V L + P Sbjct: 273 AGLRHVRRGLDQAYGELRQLMGQFRIALEGGGLEPALKRLVHRFQRDSGIRVLLSHDWPR 332 Query: 489 RLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPE----- 543 + Q +L+I +EAL+N HS A V V + + ++L V+D+G G + Sbjct: 333 GRLSPDQEFQVLRIVQEALNNVRNHSGARHVQVALHRIGCDMELVVEDDGRGFADSPPDH 392 Query: 544 -NAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 + +H G+ +MRDRA ++ G ++ GT + V ++P Sbjct: 393 RDGDDGHHLGLGVMRDRADAIGGHLEIQSELGEGTRIAV-YLP 434 >UniRef50_C4DC51 Histidine kinase with GAF domain n=2 Tax=Actinomycetales RepID=C4DC51_9ACTO Length = 566 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 77/238 (32%), Positives = 110/238 (46%), Gaps = 19/238 (7%) Query: 359 QQLVDTLVEQLT-ATLALDRHQ--ERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSC 415 +VD VE T A L L+ E Q L MEER +ARE+HD IAQ L+ + + Sbjct: 323 SDVVDAAVESTTGAALRLETALLFEEVQSLATMEERQRLAREIHDGIAQELAMLGYGIDH 382 Query: 416 LQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTE--------PGLRPALEA 467 Q A S E L ++R+E+ L+T RL L E GL A+ Sbjct: 383 ALAQLPADATDSAEQLQELRDEVT-------RLITELRLSLFELRSEVDRHGGLTTAIAD 435 Query: 468 SCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND 527 + G V L +P+ LL+IA+EA++NA KH++A + VT + Sbjct: 436 YARTVGSSAGLRVHLSLDEGGARLPAATEAELLRIAQEAITNARKHARAENLWVTCEVDP 495 Query: 528 NQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 ++ V D+G GV YG+ IM +RA+ +RG +R R+ GT V V P Sbjct: 496 PYARIEVADDGTGVSGEGA-DGRYGLTIMSERAERIRGSLEIRPRDPHGTTVAVLLAP 552 >UniRef50_O32198 Sensor histidine kinase liaS n=5 Tax=Bacillus RepID=LIAS_BACSU Length = 360 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 111/212 (52%), Gaps = 5/212 (2%) Query: 379 QERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNEL 438 Q + ++ ++ EER +AR+LHD+++Q L + M S + + + + + + + Sbjct: 139 QAQMKKSVISEERQRLARDLHDAVSQQLFAISMMTSAVLEHVKDADDKTVKRIRMVEHMA 198 Query: 439 NASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAI 497 + ++R LL R + L GL+ L +E+ K P+ +++ + + Sbjct: 199 GEAQNEMRALLLHLRPVTLEGKGLKEGLTELLDEFRKKQ--PIDIEWDIQDTAISKGVED 256 Query: 498 HLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMR 557 HL +I +EALSN +HS+AS+V V + ++Q++L V DNG G + ++++ YG+ M+ Sbjct: 257 HLFRIVQEALSNVFRHSKASKVTVILGIKNSQLRLKVIDNGKGFKMDQVKASSYGLNSMK 316 Query: 558 DRAQSLRGDCRVRRRESGGT--EVVVTFIPEK 587 +RA + G V E GT EV V PE+ Sbjct: 317 ERASEIGGVAEVISVEGKGTQIEVKVPIFPEE 348 >UniRef50_C8WYI2 Histidine kinase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WYI2_ALIAD Length = 223 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 106/197 (53%), Gaps = 5/197 (2%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLREL 448 EER IAR+LHD Q+L+ + M++ L+ D+ P+ +++ + Q+ + + ++R L Sbjct: 21 EERRRIARDLHDGPVQALTNISMKLEVLKHMLDSNPQIAKDQVDQLHRRVTEAVKEIRAL 80 Query: 449 LTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKL---DYQLPPRLVPSHQAIHLLQIAR 504 + R L + E GL A +A C ++ +G D + P+ Q + L ++ + Sbjct: 81 IYDLRPLAVDEVGLIEATKALCSQFEKNWGISTSFVVQDGVTSAEITPAKQ-VALYRLIQ 139 Query: 505 EALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLR 564 E L+N KH++A+ VV ++++ + +TV+D+G G N + HYG+I M++RA+ L Sbjct: 140 EILNNIKKHARATTTVVEFLRDESDLIITVKDDGVGFDTNYVPPGHYGLIGMKERAEFLG 199 Query: 565 GDCRVRRRESGGTEVVV 581 G + G+ ++ Sbjct: 200 GRLEIHSIIGQGSTFII 216 >UniRef50_D0MDW3 Multi-sensor signal transduction histidine kinase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDW3_RHOM4 Length = 654 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 73/225 (32%), Positives = 114/225 (50%), Gaps = 11/225 (4%) Query: 359 QQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL-- 416 ++L +V L+ T R E++ I EER +I ++LHD + Q L+ M + L Sbjct: 411 RRLFTGIVRDLSET----RRLEQEILRISDEERRSIGQDLHDGLGQMLTGMALISQSLAR 466 Query: 417 QMQGDALPESSR--ELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSA 474 ++ PE+ EL IR + R L+ ++L GL+ AL + Sbjct: 467 RLAAQGRPEARELEELTELIRQADRQARTLARGLIP---VELEANGLQAALYRLTRQTEE 523 Query: 475 KFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTV 534 FG + + + + A HL +IA+EAL+NA++H +A + VT+A +D + L V Sbjct: 524 LFGIRCSFEAEKDVPVADNMVATHLYRIAQEALNNAVRHGRAQTITVTLAADDEALHLWV 583 Query: 535 QDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 +D+G G+PE + G+ IM RA+ L G VRRRE GGTEV Sbjct: 584 RDDGVGIPEKLPETAGMGLRIMHYRARLLGGHLEVRRREEGGTEV 628 >UniRef50_A5UUR7 Multi-sensor signal transduction histidine kinase n=2 Tax=Roseiflexus RepID=A5UUR7_ROSS1 Length = 469 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 82/289 (28%), Positives = 137/289 (47%), Gaps = 30/289 (10%) Query: 303 QPDMTCDDKGCQLCPRGVLPVGDRGTTLKW---RLADSHTQYGILLATLPQGRHLSHDQQ 359 QP M + GC VLP+ D L W L DS LP ++ D+ Sbjct: 182 QPQM-IERSGCACL---VLPLHDGMALLGWIELHLEDS----------LP----VASDEL 223 Query: 360 QLVDTLVEQLTATLALDRHQERQQQLI------VMEERATIARELHDSIAQSLSCMKMQV 413 L++T+ ++ +A R + R+++ I + EERA IAR++HD IAQSL+ M+M+V Sbjct: 224 ALLETIANEVAEAIASARRRSREERAIYQLERAIAEERARIARDIHDGIAQSLAFMRMRV 283 Query: 414 SCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFR-LQLTEPGLRPALEASCEEY 472 + P+ R L +++ L +LR + R +Q E G L E+ Sbjct: 284 DLWLDWIEHDPQRLRAELLELKTTLREQIRELRRAIFALRPVQFDELGFVGGLRRYIVEF 343 Query: 473 SAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKL 532 + + + + +D P +P ++ +EAL+N KH+ A+ V V + + D +++ Sbjct: 344 AGQHNWDIDVDLTGTPSTIPPEIEAVAFRVVQEALTNVAKHAAATRVEVMIGRVDEGLQI 403 Query: 533 TVQDNGCGVPENAIRS--NHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 V+D+G G A+ H G+ MR+R +LRG + R GTE+ Sbjct: 404 VVRDDGRGFDPGALPDAPGHVGLRQMRERLAALRGQLTILSRPGAGTEL 452 >UniRef50_C3BDP5 Putative uncharacterized protein n=3 Tax=Bacillus RepID=C3BDP5_BACMY Length = 484 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 112/207 (54%), Gaps = 13/207 (6%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLREL 448 EER I+RELHD +Q+L+ + + + L + + + +ELL+ R + ++R+L Sbjct: 267 EERKRISRELHDETSQALTFLMVTMRILANEVKDIEQ--QELLNVSRETAASILREIRDL 324 Query: 449 LTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKL---DYQLPPRLVPSHQAIHLLQIAR 504 R L + GL PAL ++ KF V L D + + SH A+ L +I + Sbjct: 325 AVELRPPILDDIGLIPALRKHARKFEEKFALTVILHAPDDDIAT--IDSHTAVALYRIVQ 382 Query: 505 EALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP----ENAIRSNHYGMIIMRDRA 560 E+L+N +KH+ A+E+V+ + D ++L++ DNG G+ E A + N G+ M++RA Sbjct: 383 ESLTNVVKHTVATEIVINMEIKDCSIELSIHDNGHGIRETDFEKARQQNRIGIYGMKERA 442 Query: 561 QSLRGDCRVRRRESGGTEVVVTFIPEK 587 + L G ++ GGTEV V+ IP K Sbjct: 443 ELLDGSFFIKTHNIGGTEVRVS-IPLK 468 >UniRef50_Q1IXN3 Periplasmic sensor signal transduction histidine kinase n=2 Tax=Deinococcus RepID=Q1IXN3_DEIGD Length = 564 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 102/208 (49%), Gaps = 6/208 (2%) Query: 377 RHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRN 436 R ER ++ +ERA +ARELHDS+AQ+L + + + PE +R L Sbjct: 353 RASERAEE----QERARLARELHDSVAQALYGITLGAKTARATLGRDPEKTRASLDYTIR 408 Query: 437 ELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQ 495 ++++ LL + R L E GL AL + A+ G V D PRL P+ Q Sbjct: 409 LAEGGVSEMKALLFSLRPDALEEGGLVAALMQNAHALEARHGLTVHADLGREPRLSPTAQ 468 Query: 496 AIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMII 555 A ++A+EAL N +KH++AS+V ++V + +V L V+D+G G A+ G Sbjct: 469 AAAY-RVAQEALHNVVKHARASQVWLSVREEAGRVTLEVRDDGRGFDPAALPGGTLGQRS 527 Query: 556 MRDRAQSLRGDCRVRRRESGGTEVVVTF 583 MR+RAQ G V GT V + Sbjct: 528 MRERAQGTGGTLTVHSSPGAGTTVTLIL 555 >UniRef50_UPI0001AEDAE1 GAF sensor signal transduction histidine kinase n=1 Tax=Streptomyces albus J1074 RepID=UPI0001AEDAE1 Length = 344 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 72/225 (32%), Positives = 110/225 (48%), Gaps = 8/225 (3%) Query: 360 QLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ 419 +LV +Q L L R + ++L+V+ +R IAR+LHD Q L M LQ Sbjct: 115 ELVSGFADQAAIALELARRRAESEELVVLHDRDRIARDLHDLAIQRLFATGM---TLQST 171 Query: 420 GDALPE--SSRELLSQIRNELNASWAQLRELLTTFRL--QLTEPGLRPALEASCEEYSAK 475 A+ + ++ E +S+ ++L+ + +R + R + PGLR L + + + Sbjct: 172 TRAIADRPAAAERVSRAVDDLDTTIRIIRSTIFDLRAADEPGHPGLRRRLAETTQTAAHA 231 Query: 476 FGFPVKLDYQLP-PRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTV 534 GF L P VP A LL +A EALSNA +H+ A+ + VTV D+ + LTV Sbjct: 232 LGFRPSLRIDGPVDTTVPDDLAEQLLAVAAEALSNAARHAAATRIDVTVTATDDALTLTV 291 Query: 535 QDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 D+G G+ + G+ MR RA+S RG + SGGT V Sbjct: 292 TDDGKGIDPAGPARHTGGLANMRHRAESHRGTFTLTDSPSGGTRV 336 >UniRef50_C7MLQ8 Signal transduction histidine kinase n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MLQ8_CRYCD Length = 421 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 115/247 (46%), Gaps = 34/247 (13%) Query: 366 VEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPE 425 VEQ A + +R +E++ V EER IARE+HD A SLS + +Q + + D P Sbjct: 170 VEQRVAEV--ERTREKEAARRVEEERVRIAREIHDITAHSLSAVSIQAAAAERLIDRDPA 227 Query: 426 SSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPA-----LEASCEEYSAKFGFPV 480 ++R ++++R ++ ++R ++ R + E P L C Y+ G Sbjct: 228 AARGAIAEVRKTAKSALEEIRSMIGVLRNESQEVETNPTNGTDRLPDLCA-YACNAGLEA 286 Query: 481 KLDYQ-LPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGC 539 L+ VP++ + + IAREAL+N ++H+QA +V +T++Q +QV L ++D+GC Sbjct: 287 TLETDGYDAHKVPAYVDVTVFGIAREALTNVVRHAQAKKVRITLSQEADQVHLRIEDDGC 346 Query: 540 GVPENA-------------------------IRSNHYGMIIMRDRAQSLRGDCRVRRRES 574 G+PE I + +G+ M +R L G R Sbjct: 347 GIPEGPSASMKASAPGSASGRKRSAHSQLDDISAGGHGLQGMEERVYVLHGSFSAANRPQ 406 Query: 575 GGTEVVV 581 GG V V Sbjct: 407 GGFAVDV 413 >UniRef50_D1C6S2 Histidine kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S2_SPHTD Length = 456 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 132/248 (53%), Gaps = 8/248 (3%) Query: 340 QYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELH 399 ++G L T +G S Q+L+ + + L + R ++ + V+EER IARE+H Sbjct: 191 RHGTLRLTRSRG-EFSRADQRLLRAIGDTLGMAIENARLHQQVHEAAVVEERGRIAREMH 249 Query: 400 DSIAQSLSCMKMQVSCLQ-MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTE 458 D +AQ L+ + +++ + + +++R + +R +++ +RE + RL +T+ Sbjct: 250 DGVAQMLAYVLVKLGTVDGLLAAGAADTARAEIETMRQAAESAYTDVREQILGLRL-VTD 308 Query: 459 --PGLRPALEASCEEYSAKFGFPVKLDYQ-LPPRLVPSHQAIHLLQIAREALSNALKHSQ 515 PGL L ++++ + V L+ LPP +P + +++IA+EALSN KH+ Sbjct: 309 GAPGLAAWLRTYLDDFAEQTDLDVTLEIDDLPPGALPRASELQVIRIAQEALSNVRKHAD 368 Query: 516 ASEVVVTVAQNDNQVKLTVQDNGCGV-PENAIR-SNHYGMIIMRDRAQSLRGDCRVRRRE 573 A V V + + LTV D+G G P +A R +H+G++ MR+RA+SL G ++ + Sbjct: 369 ARSVRVRCTVEEGDLILTVADDGRGFDPSSANRQGHHFGLLTMRERAESLGGTLQIESQP 428 Query: 574 SGGTEVVV 581 GT + + Sbjct: 429 GSGTRITL 436 >UniRef50_B9L060 Putative two component system histidine kinase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L060_THERP Length = 473 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 80/250 (32%), Positives = 119/250 (47%), Gaps = 15/250 (6%) Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 G+ LA G+ + ++ Q +A R R L V EER IARE+HDS Sbjct: 203 GLYLADREDGQPFDEHDRSRLERFATQAALAIANARLHRRLMSLAVHEERERIAREMHDS 262 Query: 402 IAQSLSCMKMQVSCLQ---MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLT- 457 +AQ L + +VS L+ Q D L E+ R L Q+ ++A +RE + R L Sbjct: 263 LAQVLGYVITKVSALRELLRQPDRLAEAERHL-EQLERAARDAYADVREAILGLRTGLAP 321 Query: 458 EPGLRPALEASCEEYSAKFGFPVKL-----DYQLPPRLVPSHQAIHLLQIAREALSNALK 512 L AL + E + + G +L D L R + + LL+I +EAL+N K Sbjct: 322 NRSLVDALRSYVERWQDQSGVNARLIVEPSDDSL--RGLQPMAELQLLRIVQEALTNVRK 379 Query: 513 HSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNH---YGMIIMRDRAQSLRGDCRV 569 H++A+EV V +A+ D V + V DNG G A+ +G+ MR+RA+++ G RV Sbjct: 380 HARATEVTVQLARLDGTVCVRVADNGIGFDPGALERGQFPRFGLATMRERAEAVGGRLRV 439 Query: 570 RRRESGGTEV 579 GT V Sbjct: 440 TSLPGQGTTV 449 >UniRef50_B0C7C8 GAF domain protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7C8_ACAM1 Length = 1980 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 117/230 (50%), Gaps = 2/230 (0%) Query: 354 LSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQV 413 LS +Q + V L Q T + L R E+ + + +ER +ARE+HD++AQ+ + + +Q+ Sbjct: 1730 LSTEQLEFVQALTNQATLAIHLTRLAEQARTNALTDERNRLAREIHDTLAQAFTGISLQL 1789 Query: 414 SCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEY 472 + PE+++ L Q R+ + ++ R + R + L L AL+ + + Sbjct: 1790 EAAKNILSQQPETAKSYLDQARDLTHQGLSEARRSVHALRSEALERETLVKALQKNLTQM 1849 Query: 473 SAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKL 532 + + Q P L+ ++LL+I +EA++N L+H+QA + VT+A D +V L Sbjct: 1850 TLNTSLQTEFQIQGTPILLEEGLQLNLLRIGQEAITNVLRHAQAKTLTVTLAFTDQEVGL 1909 Query: 533 TVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 V D+G G P++ +G++ +R+R +G ++ GT + V Sbjct: 1910 CVTDDGVGFEPQDVADITGFGLVGIRERTVRYQGQVKITSHPGEGTTIEV 1959 >UniRef50_C2C0V0 Possible histidine kinase n=5 Tax=Listeria RepID=C2C0V0_LISGR Length = 358 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 113/214 (52%), Gaps = 8/214 (3%) Query: 383 QQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD--ALPESSRELLSQIRNELNA 440 ++ I++EER IARELHDS++Q L M +S L QG+ A P ++L + + +N Sbjct: 141 KEAILVEERHRIARELHDSVSQQLFAAMMLLSALNEQGEKNATPAMQKQL-KLVESIVND 199 Query: 441 SWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHL 499 S +++R LL R QL L+ +E +E +AK P+++ +++ + HL Sbjct: 200 SQSEMRALLLHLRPTQLEGKSLKVGMEQLLQELTAKI--PIEVRWEIADIALKKGIEDHL 257 Query: 500 LQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDR 559 +I +E LSN L+HS+A+ + V +A D L V D+G G + YG+ MR+R Sbjct: 258 FRIVQELLSNTLRHSKAALLEVRLAIVDQVAILKVVDDGVGFNVGEVAQGSYGLQNMRER 317 Query: 560 AQSLRGDCRVRRRESGGT--EVVVTFIPEKTFTD 591 + G ++ + GT EV + + E+T D Sbjct: 318 VEEFGGTIKIISFPNQGTSVEVKIPLVVERTSED 351 >UniRef50_C1ACX8 Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ACX8_GEMAT Length = 758 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 7/200 (3%) Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRE 447 + ER+ IARELHD++ Q + + +Q+ +Q Q P + + L +I + + + + R Sbjct: 547 LGERSRIARELHDTLLQGFTGITLQLQAVQGQIQQSPAQASDSLERILTQADGALREART 606 Query: 448 LLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQ-LPPRLVPSHQAIHLLQIARE 505 ++ R +L E L ALEA+ ++ Q L R+ PS ++ LL+I RE Sbjct: 607 MVWDIRAPELGERDLAGALEAAVRSTINAETIALQFTVQGLTQRMAPSIEST-LLRIGRE 665 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG----VPENAIRSNHYGMIIMRDRAQ 561 A++NA+KHS AS + V + ++ LTV+DNGCG +PE +G+ MR+RA+ Sbjct: 666 AVANAVKHSGASVIRVQLIFGPREISLTVEDNGCGMDTVIPEPTSEGGRWGVRGMRERAE 725 Query: 562 SLRGDCRVRRRESGGTEVVV 581 + G + + GT V V Sbjct: 726 QIGGALSIDSTKGHGTSVSV 745 >UniRef50_B9XNW0 Multi-sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XNW0_9BACT Length = 1382 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 70/248 (28%), Positives = 125/248 (50%), Gaps = 15/248 (6%) Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 GI+ + R ++ +L L Q + L R ++ ++ VM ER +AR++HD+ Sbjct: 1133 GIVSIRFTRKRSFRREEIELPQALAHQAMLAIQLMRLSQQSREAAVMAERNRMARDIHDT 1192 Query: 402 IAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFR-------- 453 +AQ + + +Q L+ DA S+ L+ ++ LN + RE L R Sbjct: 1193 LAQGFTGVIVQ---LEAAADA---GSQGLVVEVAEHLNRAGDLARESLREARRSVRALRP 1246 Query: 454 LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKH 513 L L L ALE ++ +A K D Q P ++PS +LL+I +E +NAL+H Sbjct: 1247 LALEGKNLFKALEGLIQKMTAGTTMRAKFDLQGEPCVIPSEWEDNLLRIGQEVFTNALRH 1306 Query: 514 SQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRE 573 ++ASE + + ++L +QDNG G + A + + +G++ +R+R +S+RG ++ Sbjct: 1307 ARASEFKARLVFSAQALQLELQDNGQGF-DPARQHDGFGLLGIRERVESMRGQLSIQSTN 1365 Query: 574 SGGTEVVV 581 GT V++ Sbjct: 1366 GEGTAVLI 1373 >UniRef50_B9TG52 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TG52_RICCO Length = 335 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/243 (26%), Positives = 122/243 (50%), Gaps = 12/243 (4%) Query: 334 LADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERAT 393 L Q+ ++ + Q +H + +Q L + LTA + HQ ++Q ER + Sbjct: 88 LGQGAVQWDGIMLNISQSKHEKQEIEQARRDL-QALTAHI----HQVKEQ------ERVS 136 Query: 394 IARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFR 453 IARE+HD + +L+ MK+ +S + Q + + + E + ++ +N ++ + + R Sbjct: 137 IAREIHDDLGGNLTAMKLGLSTIIQQIEDSQQVNMEQATMLQAIINQTFDAVHRISGNLR 196 Query: 454 LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKH 513 + + GL ALE ++ + G + Q++ L +I +EALSN K+ Sbjct: 197 PNILDLGLVDALEWQVSQFKKQLGITARFVTNCHDLECDPDQSMALFRICQEALSNIAKY 256 Query: 514 SQASEVVVTVAQNDNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGDCRVRRR 572 +QA V V ++ D + +T+ DNG G+ P + I+ N +G+ M++RA +L G+C + Sbjct: 257 AQADLVSVELSLVDQALFMTISDNGVGIAPADKIKPNSFGLRGMQERAAALGGECHIEAS 316 Query: 573 ESG 575 SG Sbjct: 317 SSG 319 >UniRef50_D2B2V1 Histidine kinase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B2V1_STRRD Length = 687 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 115/209 (55%), Gaps = 12/209 (5%) Query: 373 LALDRHQERQQ-QLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELL 431 L D H+ R++ + EER + RELHD + +L+ + + + + + D P + +LL Sbjct: 479 LTADLHRSRERIRTTRDEERRRLGRELHDGLGPALTSVTLTLDEARRRLDTDPRAVEKLL 538 Query: 432 SQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRL 490 ++R E+ A+ A +REL+ R L + GL AL AS E + V +D L Sbjct: 539 VRVREEMTATIASVRELVYGLRPPALDDLGLEGALRASAGETA------VTVDGAL--DD 590 Query: 491 VPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNH 550 +P+ + +IA+EAL+NA +H+ + V++ + + ++++ V D+G G+PE+ + Sbjct: 591 LPAAVEVAAYRIAQEALTNARRHAGPATVLIRLRRLPGELRVEVADDGVGLPESP--AAG 648 Query: 551 YGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 G+ MR+RA + G C + RR GGTEV Sbjct: 649 VGLTSMRERAAEVGGSCVIGRRPGGGTEV 677 >UniRef50_A6CIM0 Multi-sensor signal transduction histidine kinase n=1 Tax=Bacillus sp. SG-1 RepID=A6CIM0_9BACI Length = 619 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 122/246 (49%), Gaps = 6/246 (2%) Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 G+L+A + + + + Q + TL QL T+ + +++ I++EER IAR++HD Sbjct: 354 GMLVAARNRTKSFTDEDVQSIATLSNQLAVTIKTRMLFKEKEKRILLEERNRIARDIHDG 413 Query: 402 IAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTE-PG 460 IAQ+L+ M++ + + PE + +L+ + L S ++RE + R TE G Sbjct: 414 IAQTLAGAIMKLESAGRRFNKKPEETLKLMDESVYGLRDSLREVRESIYALRPYPTERVG 473 Query: 461 LRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVV 520 L A+ + E +F + + + + S L I +E+L N +KH++AS + Sbjct: 474 LSKAVGSKIEAVKKEFDLNISFEIRGEEIELSSMVEKVLFDIFQESLQNVIKHAKASSIE 533 Query: 521 VTVAQNDNQVKLTVQDNGCGVP-----ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESG 575 + ++ + L ++D+G G NA H+G++ + D A+ + ++ +E Sbjct: 534 ILLSYQSENILLRIKDDGVGFSLFQAMLNARERPHFGILQINDSAEKINASLQIDSKEGE 593 Query: 576 GTEVVV 581 GTEV + Sbjct: 594 GTEVTI 599 >UniRef50_B9LCJ4 GAF sensor signal transduction histidine kinase n=3 Tax=Chloroflexus RepID=B9LCJ4_CHLSY Length = 731 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 120/247 (48%), Gaps = 9/247 (3%) Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 G+L P+ L+ + +++T+ + L + R +R QQ +EER +ARELHDS Sbjct: 474 GVLNIESPERAGLTEEDAAVLETVADMLAGAVENGRLYQRAQQAAALEERNRLARELHDS 533 Query: 402 IAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFR-LQLTEPG 460 ++Q L M + + Q + P LL ++ A+ A++R L+ R L + G Sbjct: 534 VSQQLFSMTLTAQAARSQFERNPARVPALLDRLHETATAALAEMRALIFQLRPPALRDQG 593 Query: 461 LRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIH--LLQIAREALSNALKHSQASE 518 L A++ + + + G ++L+ R + I L +I +EAL+N +KH+ A Sbjct: 594 LVAAIQQHAQHLAHREGLRIELNVIGDER---HARGIEQPLFRIVQEALNNIVKHAAARN 650 Query: 519 VVVTVAQNDNQVKLTVQDNGCGVPENAIRSN---HYGMIIMRDRAQSLRGDCRVRRRESG 575 V + + N +QV + V D+G G A S H G++ MR+RA L G V R Sbjct: 651 VQIMLEFNADQVAIRVIDDGKGFDPAARPSGEGRHLGLLSMRERAAELGGSFNVHSRPGA 710 Query: 576 GTEVVVT 582 G EV V Sbjct: 711 GAEVEVV 717 >UniRef50_A6TT52 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TT52_ALKMQ Length = 469 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 68/230 (29%), Positives = 120/230 (52%), Gaps = 23/230 (10%) Query: 375 LDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQV-SCLQMQGDALPESSR-ELLS 432 L +HQ IV +ER + +ELHD I Q+L +QV + ++M+ P S + L Sbjct: 254 LTKHQ------IVSDERKKMGQELHDVIIQNLFATGLQVENIIEME----PNSKFIKDLH 303 Query: 433 QIRNELNASWAQLRELL---TTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPR 489 I+N LN + +R+ + + ++Q+ + LR L + + P++L Y++ Sbjct: 304 YIKNNLNVTITHVRQFIEQVASAKIQIEDLKLR--LTGLVDNFQRVCNIPIELQYKITEV 361 Query: 490 LVPS---HQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI 546 + S +A + I +EALSNA+KHS+A+ + + + N V T++D+G G I Sbjct: 362 TLGSLSQEKATQIYYIVQEALSNAIKHSEANRITIDIKTTLNTVGATIKDDGKGFGLQQI 421 Query: 547 -RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGD 595 + HYG++ M++RA ++ G ++ E GT V +T IP + D + D Sbjct: 422 PKGGHYGLVSMKERAANVNGLLDIKSNEK-GTRVTIT-IPWEESEDAEED 469 >UniRef50_C6CZA6 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZA6_PAESJ Length = 348 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 3/201 (1%) Query: 387 VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLR 446 V EER +AR+LHD+++Q L M M S L + E + +L Q+ + Q+R Sbjct: 139 VQEERKRLARDLHDTVSQQLFAMHMCASSLPKLQEIDRERAASVLDQLIQMSTLAQKQMR 198 Query: 447 ELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 + R ++L L AL+ +Y + G D++L L + + L I +E Sbjct: 199 IFIAQLRPMELEGRTLLEALDKWFPDYCRQNGLQGVFDWRLTEPLTEAKEH-QLFLIVQE 257 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRG 565 A++N +KHS A +++ +N+ QV L++QD+G G + +R YG+ M++RAQ L G Sbjct: 258 AMANVVKHSGAQGCSLSLTENERQVVLSLQDDGAGFRADQVRRGSYGLSTMQERAQQLGG 317 Query: 566 DCRVRRRESGGTEVVVTFIPE 586 + + GT V VT IP+ Sbjct: 318 LAEIISKPGSGTRVKVT-IPK 337 >UniRef50_Q025Z0 Histidine kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q025Z0_SOLUE Length = 969 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 4/208 (1%) Query: 379 QERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNEL 438 Q R + +V+EERA +ARE+HD++AQ + Q+ + M A +R L R Sbjct: 758 QIRSRFALVLEERARLAREIHDTLAQGFVGISSQLDAVAMSMPAEATPARGYLDLARRMA 817 Query: 439 NASWAQLRELLTTFRLQLTEP-GLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAI 497 S + R + R E L A+++ +A V +D P +P Sbjct: 818 RHSLTEARRSVMDLRASALEGQDLAAAIQSGTLLLTAGSNVKVSVDVSGPVTELPEEMEQ 877 Query: 498 HLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN---AIRSNHYGMI 554 HLL+I +EA++N LKH+ A + V + ++ L + D+G G ++ A R H+G+I Sbjct: 878 HLLRIVQEAVTNVLKHAAARNIWVKIRVEPRKLYLAILDDGRGFDQHDVFASRGGHFGVI 937 Query: 555 IMRDRAQSLRGDCRVRRRESGGTEVVVT 582 MR+RA+ L G+ R+ GT+V VT Sbjct: 938 GMRERAERLGGELRLASHPGEGTQVEVT 965 >UniRef50_D0BKY9 Sensor histidine kinase VraS n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BKY9_9LACT Length = 351 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 111/209 (53%), Gaps = 4/209 (1%) Query: 380 ERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELN 439 E ++ I+ ER IARELHDS++Q L M +S + Q + L ++ L+ + +N Sbjct: 142 EETKEEIIELERHRIARELHDSVSQQLFAAMMMLSAMNEQKEQLSPVIQQQLALVEKVIN 201 Query: 440 ASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIH 498 S +++R LL R + L L +E+ +E + K + L ++L +PS H Sbjct: 202 DSQSEMRALLLHLRPISLENKTLVQGIESLLKELTTKV--QLSLHWELDEVTLPSTFEDH 259 Query: 499 LLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRD 558 L +I +E +SN L+H++A ++ V + Q D+ + L + D+G G + ++ YG+ + + Sbjct: 260 LFRIVQELVSNTLRHAKAKQLEVFLKQKDDYIILKLVDDGIGFDTSVSKAGSYGLKNIEE 319 Query: 559 RAQSLRGDCRVRRRESGGTEVVVTFIPEK 587 R + G C++ + GT + + IP+K Sbjct: 320 RVAGMGGQCKIISIANQGTIIEIK-IPQK 347 >UniRef50_A8KXF1 GAF sensor signal transduction histidine kinase n=4 Tax=Frankia RepID=A8KXF1_FRASN Length = 568 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 119/240 (49%), Gaps = 12/240 (5%) Query: 343 ILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSI 402 ++LA P GR + + T + L L + + +L+V+E+R IAR+LHD + Sbjct: 327 VVLARGPAGRPFADGDLDMAATFAGHVQVALGLAASRATRDRLLVLEDRDRIARDLHDHV 386 Query: 403 AQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ----LTE 458 Q L + + + + + P+S+ L + + ++L+A+ ++R T F L+ Sbjct: 387 MQRLYAVALGLQGMAAA-EERPQSAGRLTTYV-DDLDATIREIRS--TVFELRGRRSTGG 442 Query: 459 PGLRPALEASCEEYSAKFGFPVKLDYQLP-PRLVPSHQAIHLLQIAREALSNALKHSQAS 517 PG+R L EE + GF +L P + + A HLL +ARE+LSN +H++AS Sbjct: 443 PGVRARLGEIVEEVAEALGFSPRLRVDGPLDTALEGNIADHLLAVARESLSNVARHARAS 502 Query: 518 EVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 V ++V + V D+G G+ + RS G+ +R RA+ L G + SGGT Sbjct: 503 RVELSVTVGQGWLCAEVTDDGVGLGDTGRRS---GLRNLRSRAEELGGTFDIAPGPSGGT 559 >UniRef50_D2AQR2 Histidine kinase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AQR2_STRRD Length = 591 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 85/275 (30%), Positives = 131/275 (47%), Gaps = 26/275 (9%) Query: 313 CQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGR-HLSHDQQQLVDTLVEQLTA 371 L P +P+G G G+L GR S + + + Q Sbjct: 330 ASLGPVAAVPIGAAGGA-----------RGVLSLGKRSGRMPFSQSELRTLHAFAGQAAV 378 Query: 372 TLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELL 431 L L + ++L ++EER IAR+LHD + Q L + M + D PE+S L Sbjct: 379 ALELAESRMDAERLGLLEERDRIARDLHDVVIQRLFAVAMTLMSTVRLVDR-PEASGRLQ 437 Query: 432 SQIRNELNASWAQLRELLTTFRLQLTEPG----LRPALEASCEEYSAKFGF--PVKLDYQ 485 + I +EL+ + Q+R T F LQ ++ G LR + E A GF + ++ Q Sbjct: 438 NSI-DELDGTIRQIRS--TIFALQTSQRGADFGLRSQIVELVEGARAHLGFMPGLSMEGQ 494 Query: 486 LPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENA 545 L R VP+ A HLL + REALSN ++H++A+ V+V D ++ L V D+G G+PE+ Sbjct: 495 LDGR-VPAPVAEHLLAVVREALSNIVRHARAARAEVSVEVADGRLVLVVTDDGVGMPEDG 553 Query: 546 IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVV 580 RS G+ +++RA+ L G GGT +V Sbjct: 554 RRS---GLRNLQERAERLGGSFVAETPRGGGTRLV 585 >UniRef50_B8D0J3 Histidine kinase n=2 Tax=Clostridia RepID=B8D0J3_HALOH Length = 391 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 102/196 (52%), Gaps = 1/196 (0%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLREL 448 +ER +ARE+HD AQS++ + +V Q D + +R L ++ + S ++R++ Sbjct: 179 DERKRVAREIHDGPAQSIANLVFRVELAQKLMDKDLKKARNELEDVKELVRLSMQEVRKI 238 Query: 449 LTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 + R + L + GL P L +++ + + + P R +P+ I + ++ +E L Sbjct: 239 IYDLRPMSLDDLGLIPTLRRYINKFNEQTKIIIDFNILGPKRRLPNTYEITIFRLIQEGL 298 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDC 567 +N KHS+AS VT+ Q+ + + D+G G + +N +G++ MR+R + L G Sbjct: 299 NNIYKHSKASTGTVTLEYTPEQINILISDDGIGFKPEEVGANKFGLVSMRERCELLGGKL 358 Query: 568 RVRRRESGGTEVVVTF 583 + ++ GT++ +T Sbjct: 359 DLFSEKNKGTKIKITL 374 >UniRef50_D1VQR6 GAF sensor signal transduction histidine kinase n=1 Tax=Frankia sp. EuI1c RepID=D1VQR6_9ACTO Length = 596 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 80/255 (31%), Positives = 126/255 (49%), Gaps = 25/255 (9%) Query: 327 GTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTA-------TLALDRHQ 379 G + L SH G ++ GR L + DT +E A L L + Sbjct: 333 GPVMVVPLVASHRTSGAVI----LGRRLG--AEPFTDTDLEMAAAFAGHVAIALQLAESR 386 Query: 380 ERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELN 439 + +L ++E+R IAR+LHD + Q L + + + L +G++ P +R L + + ++L+ Sbjct: 387 SARSRLTMLEDRDRIARDLHDHVMQRLYAVALGLQGLA-EGESQPNRARRLATYV-DDLD 444 Query: 440 ASWAQLRELLTTFRLQ----LTEPGLRPALEASCEEYSAKFGFPVKLDYQLP-PRLVPSH 494 A+ ++R+ T F L+ GLR AL +E + FGF +L P V + Sbjct: 445 ATIREIRQ--TVFELRGRSAAGGTGLRIALRGVVDEMTDAFGFAPRLLADGPLDSAVDAE 502 Query: 495 QAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMI 554 A HLL + RE+LSNA +H++ VTV D QV + D+G GV E +RS+ G+ Sbjct: 503 VADHLLAVVRESLSNAARHARCRTASVTVTVADGQVCAEIVDDGVGVGE-PVRSS--GLA 559 Query: 555 IMRDRAQSLRGDCRV 569 MR RA LRG ++ Sbjct: 560 NMRSRADELRGSFQI 574 >UniRef50_B2VGC1 HrpX protein (Hrp cluster) n=6 Tax=Enterobacteriaceae RepID=B2VGC1_ERWT9 Length = 494 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 110/206 (53%), Gaps = 2/206 (0%) Query: 381 RQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNA 440 RQ+++ EER IARE+HD + Q L+ ++M +S L++Q E + + + Sbjct: 278 RQREVSREEERKRIAREIHDELGQHLTSLRMGISMLRIQFSKDNPLLHERVVHLMGLTDK 337 Query: 441 SWAQLRELLTTFRLQLTEPGLRPALEASCEEY-SAKFGFPVKLDYQLPPRLVPSHQAIHL 499 + +R + T R + + GL PALE +E+ S G +L + QA Sbjct: 338 TIQVVRNVATRLRPNVLDMGLTPALEWLRDEFISRHIGCCCRLITPEKEVRLGDEQATAA 397 Query: 500 LQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDR 559 ++A+E+L+N +H+QASEV++ + ++ V LTV+DNG G + N +G++ MR+R Sbjct: 398 FRVAQESLTNISRHAQASEVIILLVRHAGSVVLTVRDNGRGFDCQNGKDNAFGLMSMRER 457 Query: 560 AQSLRGDCRVRRRESGGTEVVVTFIP 585 + L G + + S GT + +T IP Sbjct: 458 GRMLGGRVDIESKPSIGTCISLT-IP 482 >UniRef50_B5I2X6 Two-component system sensor kinase n=10 Tax=Streptomyces RepID=B5I2X6_9ACTO Length = 381 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 13/239 (5%) Query: 349 PQGR-HLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLS 407 P+G + + ++L+ L + L R ER ++L + EER+ +A ELHD+++Q L Sbjct: 141 PEGSCGFTEEDEELLSILAQHAAIALTNARLYERSRELTIAEERSRLAHELHDAVSQKLF 200 Query: 408 CMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFR-LQLTEPGLRPALE 466 +++ D P ++ L Q+ + +LR + R L E GL L Sbjct: 201 SLRLTAQAAAALVDRDPSRAKGELHQVAVLAAEAADELRAAVVELRPAALDEDGLTATLR 260 Query: 467 ASCE----EYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT 522 ++A+ F + ++ R +P+ Q +L++A+EAL NAL+HS A V VT Sbjct: 261 TQIHVLDRAHTARVTFAAR-NF----RALPAAQEEAMLRVAQEALHNALRHSGAEHVDVT 315 Query: 523 VAQNDNQVKLTVQDNGCGVPENAIR--SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 + + + L V D+GCG AIR H G++ MRDR + G V GT + Sbjct: 316 LDRRGSGAVLRVTDDGCGFEPKAIRRAGRHLGLVSMRDRTSGVGGTLTVESAPGKGTTI 374 >UniRef50_Q47KE3 GAF:ATP-binding region, ATPase-like n=24 Tax=Actinomycetales RepID=Q47KE3_THEFY Length = 572 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 115/226 (50%), Gaps = 19/226 (8%) Query: 360 QLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQV--SCLQ 417 Q++ TL L + ++LIV+E+R IA++LHD + Q L + M + S + Sbjct: 347 QMLHAFAGHAAVTLELAEARRHAERLIVLEDRDRIAKDLHDVVIQRLFAIAMSLMSSVRR 406 Query: 418 MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPG----LRPALEASCEEYS 473 ++ D + + + Q ++L+ + Q+R T F LQ G LR + + Sbjct: 407 IEDDTVAQR----IQQAVDDLDDTIRQIRS--TIFALQHNTEGGPAWLRSRILDVVGAAT 460 Query: 474 AKFGFP--VKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVK 531 GF V+LD + VP A H+L + REALSN +H++AS+ + V Q D+ V Sbjct: 461 ESLGFSPGVRLDGPI-DSAVPDSIAEHVLAVLREALSNVARHARASQADIVV-QVDSHVT 518 Query: 532 LTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 LTV D+G G+PE RS G+ + +RA+SL G RR GGT Sbjct: 519 LTVTDDGVGLPEQGRRS---GLRNLAERAESLGGSFEAARRPEGGT 561 >UniRef50_C4RLN3 Histidine kinase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RLN3_9ACTO Length = 565 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 99/205 (48%), Gaps = 8/205 (3%) Query: 383 QQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASW 442 + L EER +ARE+HD +AQ L + + D P + E L +R E+ Sbjct: 346 RSLATNEERQRLAREIHDGVAQELVMVGYGIDNALAYVDEDPVETAEALRTLRGEVTRVI 405 Query: 443 AQLRELLTTFRLQLTEPGLRPALEASCEEYS----AKFGFPVKLDYQLPPRLVPSHQAIH 498 +LR L R ++ G L A+ EY+ A G V L +P+ Sbjct: 406 TELRLSLFELRSEVDRHG---GLAAAIAEYARTVGASGGLRVHLSLDESTARLPAATEAE 462 Query: 499 LLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRD 558 LL+IA+EA++NA KH+ AS + VT + ++ V D+G G+ + HYG+ IM + Sbjct: 463 LLRIAQEAVTNARKHAGASNLWVTCEVDPPYAQIEVSDDGHGIGDQRT-DGHYGLAIMAE 521 Query: 559 RAQSLRGDCRVRRRESGGTEVVVTF 583 RA+ +RG +R R+ GT V V Sbjct: 522 RAERIRGRLEIRPRQPSGTTVAVVL 546 >UniRef50_B1ZXD3 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZXD3_OPITP Length = 345 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 106/212 (50%), Gaps = 7/212 (3%) Query: 382 QQQLI--VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELN 439 QQL+ +EE+ + R+LHD I QSL + + + ++ L+ R LN Sbjct: 135 NQQLLNRSLEEKIRLGRDLHDGIIQSLYAAGLSIESARALARTDAVAADRQLAACRENLN 194 Query: 440 ASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSA--KFGFPVKLDYQLPPRLVPSHQA 496 + ++R + + L + AL+A E A F +++D +L P Q+ Sbjct: 195 QTIREVRAYIAGLAPENLRQANFADALKALVHELDAGRDVQFELRVDEAATAQLTPE-QS 253 Query: 497 IHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIM 556 I LQIAREA+SN+L+H QA+ V V + D + L VQDNG G + R +G+ M Sbjct: 254 IEALQIAREAVSNSLRHGQATRVSVRLHPGDGETCLAVQDNGRGFDLQSRRGTGHGLGNM 313 Query: 557 RDRAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 RA+ L G R+ +GGT VV T +P +T Sbjct: 314 HARAEHLGGRLRIESAPAGGTRVVFT-LPMRT 344 >UniRef50_D2B559 Histidine kinase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B559_STRRD Length = 362 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 4/212 (1%) Query: 375 LDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQI 434 L RH E+ + + +EERA +ARE+HD++AQ S + Q+ Q QG P++ R+ +S Sbjct: 152 LIRHSEQNRVVGTLEERARLAREIHDTLAQGFSGIIAQLEAAQ-QGIDDPDTVRKRISLA 210 Query: 435 RNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPS 493 + S + R + R + L L AL A E +SA G V + R +PS Sbjct: 211 KQLARDSLNEARRSVDALRPEPLERAELHEALAAVAERWSAATGVLVTVSVDGELRRLPS 270 Query: 494 HQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGM 553 +L+ A+EAL+N +H++A +T++ D +V L V D+G G + A YG+ Sbjct: 271 EMETTVLRAAQEALANVARHARAGRAALTLSYMDEEVTLDVLDDGTGF-DPAATGGGYGL 329 Query: 554 IIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 I MR+RA G V GGT + V+ IP Sbjct: 330 IAMRERASRSGGTVTVESAPGGGTALCVS-IP 360 >UniRef50_B8CZJ7 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ7_HALOH Length = 352 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 379 QERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQM---QGDALPESSRELLSQIR 435 ++ ++L ++EER IARELHDS++Q+L + + ++ L++ +GD + R+ + ++ Sbjct: 143 EKENKKLAIIEERNRIARELHDSVSQNLFGINLNLNTLEVLIDEGD--HDRVRKTVEDLK 200 Query: 436 NELNASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSH 494 + ++R ++ + + L E ALE+ E Y ++ + V S Sbjct: 201 KMVQEVQTEMRLMIYELKPVHLREKDFFEALESLVELYRNRYNLKITTHLNGNENRVESE 260 Query: 495 QAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR--SNHYG 552 + L ++A+EAL+N +KH+ A +V +T+ +N + + ++DNG G ++ S +G Sbjct: 261 VQLALYRVAQEALNNIVKHADADKVSITLGIGNNGITMAIKDNGKGFNVGRVKAGSGRFG 320 Query: 553 MIIMRDRAQSLRGDCRVRRRESGGTEVVVT 582 + M+DR + GD + + GT V V+ Sbjct: 321 ISGMKDRVNDVGGDFDIESQPGQGTTVKVS 350 >UniRef50_C7MS84 Histidine kinase with GAF domain protein n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MS84_SACVD Length = 385 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 113/236 (47%), Gaps = 14/236 (5%) Query: 354 LSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQV 413 S + +++ Q LAL + ++ + EER IARELHD I Q L MQ+ Sbjct: 145 FSPETVEMLTAFAGQAGVVLALAEGANARHRITLYEERERIARELHDVIVQRLYAAGMQL 204 Query: 414 SCLQMQGDA-LPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEY 472 ++ + ++ E L + ++L+A+ ++R + R EP A E Sbjct: 205 DRVRRRMRWRFAKADSERLGEAIDQLDATIQEIRGTVRELRSTEVEPRQLSATRTDLAE- 263 Query: 473 SAK---------FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTV 523 SA+ G+P L+ +P+ +A H+ REALSN ++HS ASEV VT+ Sbjct: 264 SARGEVRTAGELLGYPPTLELSGELADIPAERADHIRAALREALSNVVRHSGASEVRVTL 323 Query: 524 AQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 ++D ++L V+DNGCGVP + G+ + +RA+ G + S GT V Sbjct: 324 RRDDGGLRLRVRDNGCGVPRDV---EKRGLRHLAERAKGAGGTFTINSSPSMGTMV 376 >UniRef50_Q67S65 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67S65_SYMTH Length = 633 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 71/238 (29%), Positives = 109/238 (45%), Gaps = 3/238 (1%) Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 G+L+ Q +L+ L Q + + +++ V+EER +ARELHDS Sbjct: 382 GVLVVASRQPGRFDEQHLRLLTLLANQAGRLIESSELHAKAREVAVLEERNRLARELHDS 441 Query: 402 IAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFR-LQLTEPG 460 + Q L + + + D PE +R LL++ R + A++R L+ R L E G Sbjct: 442 VTQVLFGLTLNLESAVGLLDRKPEKARTLLTRSREMAGEALAEMRSLIFELRPAALQEKG 501 Query: 461 LRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVV 520 L AL + + G V L RL P + L ++A+EAL+N KH++A V Sbjct: 502 LAMALSNHINLFRRRTGVEVNLTLSGDERLSPDVE-FALYRVAQEALNNVAKHARARHVR 560 Query: 521 VTVAQNDNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 V + + L V D+G G P + R +GMI MR+R L+G V GT Sbjct: 561 VKLDLRPEEALLEVCDDGVGFDPTASARGASFGMIGMRERVSELKGSLEVISAPGQGT 618 >UniRef50_D1C419 Histidine kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C419_SPHTD Length = 437 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 109/232 (46%), Gaps = 10/232 (4%) Query: 358 QQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ 417 Q Q L+++L AT A ER++Q V+EER +ARE+HD++AQ + + M + + Sbjct: 185 QSQERKRLIDELMATRAA--LAERERQAGVIEERQRLAREIHDTLAQGFTSIVMHLEAAE 242 Query: 418 MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPG--LRPALEASCEEYSAK 475 A + R + Q R S R L+ R + E G L AL E +S Sbjct: 243 PHIPAEATALRRHVEQARATARDSLNDARRLVWALRPEQLEQGGSLADALARVAERWSED 302 Query: 476 FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQ 535 G + P +P + L +I +EAL+N KH+QA V +T++ D++V L VQ Sbjct: 303 TGITAHVTVDGTPVPLPPDVEVTLFRITQEALANVRKHAQAGRVDITLSYLDDEVLLDVQ 362 Query: 536 DNGCGVPENAIRS------NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 D+G G + + +G+ MR+R + L G + GT + V Sbjct: 363 DDGVGFDRATVSATPGSVNGGFGLTGMRERLRLLGGSLMIESAPGEGTSITV 414 >UniRef50_D2L4L4 Histidine kinase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L4L4_9DELT Length = 636 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 13/252 (5%) Query: 342 GILLATLPQGRHLSH-------DQQQLVDTLVEQ---LTATLALDRHQERQQQLIVMEER 391 G+L +L Q LSH +++L LV++ L +A E+Q + EER Sbjct: 365 GMLAFSLSQAFALSHRFSQAFASEERLAGALVDKNLRLETEMAERNRLEQQIVTVSEEER 424 Query: 392 ATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTT 451 I+ ELHD + Q L+ +++ L G A + E L+++ L+ Q +L Sbjct: 425 RRISLELHDGLCQGLTAARLRCDALSPGGSAT-GADGEALARLSGLLDTLVGQAYDLSRG 483 Query: 452 FRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNAL 511 L G+ P+ + P++ +P + P L +IA+EA++NAL Sbjct: 484 L-WPLEHDGVGPSFREMLRRQAEASAVPIEFHRDMPCQACPRPHLAQLYRIAQEAVANAL 542 Query: 512 KHSQASEVVVTVAQNDNQ-VKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVR 570 KH++ +VV++A Q L V+D+GCG + + G+ IM RA+ + G+ R+ Sbjct: 543 KHARPGRIVVSLACPAGQGTVLAVRDDGCGRCGDKAPAGGLGLGIMAHRARLIGGELRIL 602 Query: 571 RRESGGTEVVVT 582 GGTEVV T Sbjct: 603 DAPGGGTEVVCT 614 >UniRef50_Q2SUK5 Two-component hybrid sensor and regulator n=33 Tax=Burkholderiaceae RepID=Q2SUK5_BURTA Length = 740 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 119/225 (52%), Gaps = 12/225 (5%) Query: 365 LVEQLTATLALDRHQERQQQLIVM------EERATIARELHDSIAQSLSCMKMQVSCLQM 418 +VE+ A AL R +E +++ + +ER IARELHD +AQ+L+ +++ + + Sbjct: 500 IVERERAEEALARSREELREIAAISSTAREQERGRIARELHDELAQTLAMLRLDLERVST 559 Query: 419 QGDALPESSRELLSQIRNELNASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFG 477 G+ L +++R L+ + A R + + R L L + GL PA++ + + + G Sbjct: 560 TGNELAGR----FTEMRGLLDGAVAATRRIASDLRPLMLDDLGLVPAIQWLVQAFQQRHG 615 Query: 478 FPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDN 537 L P + QA +I +E+L+N +H++AS V + + +D +V L+V+DN Sbjct: 616 IGCTLIVDPPELDLVEPQASTTFRILQESLTNVGRHARASHVDIRLIADDREVMLSVRDN 675 Query: 538 GCGV-PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 G G EN + N +G++ +R+RA ++G V+ GT + V Sbjct: 676 GVGFDTENPRKPNSFGLVGLRERAYLVQGTLSVQTAPGRGTAIEV 720 >UniRef50_B1Z4G8 Multi-sensor signal transduction histidine kinase n=1 Tax=Burkholderia ambifaria MC40-6 RepID=B1Z4G8_BURA4 Length = 665 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 111/230 (48%), Gaps = 13/230 (5%) Query: 365 LVEQLTATLALDRHQERQQQL------IVMEERATIARELHDSIAQSLSCMKMQVSCLQM 418 + E++ A AL + +E + L + EE+ IARELHD + Q L+ +KM +S +++ Sbjct: 422 VTERVRAETALKQSREELRDLSANLQNVREEEKTRIARELHDDLGQQLTALKMDLSAVEL 481 Query: 419 --QGDALPESS-RELLSQIRNELNASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSA 474 G P + RE L + ++++ A +R + R + L + GL PA+E +++ Sbjct: 482 GLAGVVAPNTGVREQLGGMHGLIDSTVASVRRIAADLRPVMLDDLGLVPAIEWLANDFTR 541 Query: 475 KFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTV 534 ++ V D A L +I +EAL+N +HS A+ V + + + L + Sbjct: 542 RYRITVDRDIAPVDTAFTGVGATTLFRIVQEALTNVARHSDATNVQLALKLEEGYCVLRI 601 Query: 535 QDNGCGVPENAIRSN---HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 DNG G PENA +G+I +R+RA G V R G + V Sbjct: 602 ADNGHGAPENARNEQDRPSFGLIGIRERAHMFEGTVTVDNRPGAGFTITV 651 >UniRef50_A4AC75 Two-component system sensor kinase n=1 Tax=Congregibacter litoralis KT71 RepID=A4AC75_9GAMM Length = 366 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 109/214 (50%), Gaps = 15/214 (7%) Query: 375 LDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQI 434 L++ + R+ +L V EER IARELHD +A LS M +Q + G + P ++ E + + Sbjct: 148 LEQRKNREAELAVTEERGRIARELHDIVAHQLSLMTVQAGAAKTVGQSDPIAAMEAMEAV 207 Query: 435 RNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKF------GFPVKLDYQLPP 488 + ++R LL R + L P + C + + G V+L Q Sbjct: 208 EGAGRQALKEMRHLLHVLRRDENDSSLVP--QPGCADLPSLIAEVNATGVAVQL--QTGG 263 Query: 489 RL--VPSHQAIHLLQIAREALSNALKHS-QASEVVVTVAQNDNQVKLTVQDNGCGVPENA 545 RL +P+ + + +I +EAL+N LKH+ + V VTVA + V++++ D+G G E + Sbjct: 264 RLSGLPARVDLSVYRIVQEALTNVLKHAGKQVFVTVTVASSAGGVEVSICDSGGGPGETS 323 Query: 546 IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 R YG+ MR+RA+ L G R +GG EV Sbjct: 324 GRG--YGIAGMRERAEMLGGWLRTGPGSNGGFEV 355 >UniRef50_B2TG29 PAS/PAC sensor signal transduction histidine kinase n=2 Tax=Burkholderia RepID=B2TG29_BURPP Length = 370 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 100/182 (54%), Gaps = 6/182 (3%) Query: 390 ERATIARELHDSIAQSLSCMKMQVSCLQMQ-GDALPESSRELLSQIR---NELNASWAQL 445 E+ IARELHD + Q ++ +KM ++ + + E+ R L +R ++L+A + Sbjct: 160 EQRRIARELHDDLGQQITALKMTLALHETELARHFSEAGRARLGSVREMADQLDAMATSM 219 Query: 446 RELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAR 504 R + R L + GL ALE E + ++G PV+ + + AI L ++ + Sbjct: 220 RRIAADLRPPMLDDLGLEAALEWMTEGFEQRYGVPVRCEISPDVLCLNDLAAISLYRVIQ 279 Query: 505 EALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN-AIRSNHYGMIIMRDRAQSL 563 EAL+N +H++A+EV VT++ +D L + D+G G+P+ A R++ +G++ MR+R L Sbjct: 280 EALTNVARHARANEVFVTLSADDRHYHLQIHDDGVGLPKAPAPRADCFGLLGMRERISQL 339 Query: 564 RG 565 G Sbjct: 340 GG 341 >UniRef50_D2PW73 Histidine kinase n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PW73_9ACTO Length = 430 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 121/241 (50%), Gaps = 15/241 (6%) Query: 352 RHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKM 411 R +S +Q+ L+EQL A A D E VM ER +ARE+HD++AQ ++ + M Sbjct: 192 RVISQSEQR--AELIEQLEA--ARDELAEAHHTAGVMAERERMAREIHDTLAQGMTSIVM 247 Query: 412 --QVSCLQMQ-GDALPESSRELLSQIRNELNASWAQLRELLTTFR-LQLTEPGLRPALEA 467 Q + +++Q G ++R L+ I + + A+ R L+ F + L E L L Sbjct: 248 LAQTAAVELQRGGTASAATR--LAAIEDTARENLAEARALVAAFTPVALAEAPLADVLRR 305 Query: 468 SCEEYSAKFGFPVKLDYQLPPRLV---PSHQAIHLLQIAREALSNALKHSQASEVVVTVA 524 E ++A+ G V++ +P V P Q + LL+ A+EAL+N KH+ A+ V++T+ Sbjct: 306 QAERFAAETGVDVQVALDMPDEEVAALPQGQQVVLLRAAQEALANVRKHAGATSVLITLT 365 Query: 525 QNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 + V++ + D+G G A YG+ MR R + G +V GT V V I Sbjct: 366 MAPDGVRIEISDDGSGF-VTAAPVTGYGLAAMRGRVEESGGTVQVDSAPGRGTRVQV-LI 423 Query: 585 P 585 P Sbjct: 424 P 424 >UniRef50_D1CE67 Multi-sensor signal transduction histidine kinase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CE67_THET1 Length = 748 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 98/200 (49%), Gaps = 6/200 (3%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLREL 448 EER IAR+LHD AQ+L + ++ L+ LPE+++ + ++ + + A +R Sbjct: 541 EERRRIARDLHDDTAQALIALSRRIDSLREDLGDLPEAAQRKIEDLKALTDQTLASVRRF 600 Query: 449 LTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 R L + GL PALE E + ++ +L Q R + + L +IA+EAL Sbjct: 601 SRDLRPSILDDLGLVPALEWLVSENAKRYKITTRLKIQGEERRLQPEVELALFRIAQEAL 660 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG--VPENAIR---SNHYGMIIMRDRAQS 562 +N KHSQA+ V + D +LTV DNG G P N G++ M +RA Sbjct: 661 NNTAKHSQATGAAVELTFGDTWCRLTVSDNGIGFQTPPNISELADRGRMGVMGMYERANL 720 Query: 563 LRGDCRVRRRESGGTEVVVT 582 L G+ VR GT + VT Sbjct: 721 LGGNLYVRTAPGQGTRITVT 740 >UniRef50_D1C657 GAF sensor signal transduction histidine kinase n=2 Tax=Bacteria RepID=D1C657_SPHTD Length = 492 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 94/340 (27%), Positives = 146/340 (42%), Gaps = 52/340 (15%) Query: 270 PVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCP-----RGVLPVG 324 PV +G+ + + + LR+ PD+T D + P R +L V Sbjct: 157 PVGHGMLGVVMSDGVVLRI---------------PDVTKDPRSFGFPPHHPVMRSLLAVP 201 Query: 325 DRGTTLKWRLADSHTQY-GILLATLPQG-RHLSHDQQQLVDTLVEQLTATLALDRHQERQ 382 R SH + G L T +G Q ++ Q + R +R Sbjct: 202 IR----------SHGRILGSLYLTEKEGASEFDAADQARLERFATQTALAIENARLHQRV 251 Query: 383 QQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ-MQGDALPESSRELLSQIRNELNAS 441 Q L + EER IARE+HDS+AQ L + + Q + + E + E + Q+ + Sbjct: 252 QALAIAEERERIAREMHDSLAQVLGYVNTKAQAAQELLRNGQQERASEQIGQLAQAARDA 311 Query: 442 WAQLRELLTTFRLQLT-EPGLRPALEASCEEYSAKFGFPVKLDYQLPP------RLVPSH 494 +A +RE + R L E L+ + + + G PV D++ P RL P Sbjct: 312 YADVRENILGLRTSLEREREFLETLQDYLQRWQDQSGIPV--DFRTTPAGITDLRLSPLA 369 Query: 495 QAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV-PENAIRSN--HY 551 + + LL+I +EAL+N KHS AS V + ++ + TV+DNG G P RS + Sbjct: 370 E-LQLLRIIQEALANVRKHSGASRATVHIHRSAGWIGATVEDNGSGFDPSTIGRSAFPRF 428 Query: 552 GMIIMRDRAQSLRGDCRVRRRESGGTEVVV------TFIP 585 G+ MR+RAQ++ G +R GT V V F+P Sbjct: 429 GLATMRERAQAVGGTLEIRSAPGEGTRVAVRLPVGAAFVP 468 >UniRef50_Q023R2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023R2_SOLUE Length = 838 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 2/196 (1%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLREL 448 +ER +AR+LHD + Q L+ + +++ L + E R+ L +++ + ++R L Sbjct: 635 DERRRVARDLHDDVTQRLALLSIEIGKLATETSGSVEEIRKRLRYFQSQARLASNEVRRL 694 Query: 449 LTTFRLQLTEP-GLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 + E GL ALE C+E++ G + D + ++ + A L ++A+E L Sbjct: 695 SHGLHPSVIEDFGLSTALEDFCQEFARAQGITLIFDALVADAVLSAGDASCLYRVAQECL 754 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNH-YGMIIMRDRAQSLRGD 566 N KHS A+EV V +A++ V+LT++DNG G A R N G++ M++R + G Sbjct: 755 RNVAKHSGATEVRVGIARDGANVRLTIKDNGSGFHAGADRVNKGLGLVSMKERVKMANGT 814 Query: 567 CRVRRRESGGTEVVVT 582 + + GTE+V + Sbjct: 815 LLITSQPGQGTEIVAS 830 >UniRef50_C7QZV7 Histidine kinase n=3 Tax=Micrococcineae RepID=C7QZV7_JONDD Length = 422 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 104/223 (46%), Gaps = 15/223 (6%) Query: 374 ALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQ 433 AL+ Q+RQ++L + ER IARE+HD +A SLS M Q + P+ + L+ Sbjct: 195 ALESEQDRQKELGAVAERTRIAREMHDIVAHSLSVMIAQADGGRYAAATNPDLAATALTT 254 Query: 434 IRNELNASWAQLRELLTTFRLQLTEPG-------LRP-----ALEASCEEYSAKFGFPVK 481 I A+ A +R LL R + PG L P +LE+ + A G V Sbjct: 255 IAETGRAALADMRRLLGVLREGDSPPGAGTSLGELTPQPAEESLESLVNQIRAS-GVRVS 313 Query: 482 LDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASE-VVVTVAQNDNQVKLTVQDNGCG 540 L PR +P + + ++ +EAL+N LKH+ V V + + LT++D+G G Sbjct: 314 LIRMGQPRTLPPGAGLTVYRVCQEALTNILKHAGPDPTVTVHITWAATSLTLTIEDDGRG 373 Query: 541 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 V A G++ MR+RA GD R GG V +T Sbjct: 374 V-AAANDGQGMGLLGMRERAALFGGDVTTGPRPGGGFRVSLTL 415 >UniRef50_C5AIA0 Multi-sensor signal transduction histidine kinase n=24 Tax=Burkholderia RepID=C5AIA0_BURGB Length = 769 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 119/221 (53%), Gaps = 17/221 (7%) Query: 384 QLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ------GDALPESSRELLSQIRNE 437 Q + EE+ IARELHD + Q L+ +KM +S ++ + G+A S E L ++R Sbjct: 549 QRVREEEKTRIARELHDDLGQQLTALKMDLSAVEHRLLRDGTGEAH-ASVVEPLREMRRL 607 Query: 438 LNASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLV--PSH 494 ++A+ A +R + R + L + GL PA+E +++ ++G ++++ ++ P V P+ Sbjct: 608 IDATVASVRRIAADLRPVMLDDLGLVPAIEWLANDFTNRYG--IEVERRIDPGDVRFPNA 665 Query: 495 QAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPE----NAIRSNH 550 A L +I +EAL+N +H++AS V +T+ D Q L + D+G G + A Sbjct: 666 TATALFRIVQEALTNVARHAEASHVALTLGIEDRQCVLRIVDDGVGADQADGRRAPDDKS 725 Query: 551 YGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTD 591 +G++ +R+RA L G R+ + G + +T IP + D Sbjct: 726 FGLLGIRERAHMLGGTVRMETARNQGYALTIT-IPLPSTPD 765 >UniRef50_UPI00017468E2 histidine kinase n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017468E2 Length = 698 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 112/210 (53%), Gaps = 9/210 (4%) Query: 379 QERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNEL 438 Q + QQ V+EER IARE HD++ Q L+ + +++ + + +R+LL Q R L Sbjct: 483 QLKTQQEAVLEERQRIAREFHDTLEQELAGLSLRLDAATPR--VADDKARQLLEQQRKLL 540 Query: 439 NASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDY--QLPPRLVPSHQ 495 + + R+ + R E L AL+ + P++++ ++PP +P Sbjct: 541 SRLQTETRDFVWDLRDASRNEVPLPEALQGLVDHLQTTTAIPIQVEVHGEIPP--LPPLV 598 Query: 496 AIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN--AIRSNHYGM 553 HLL+IAREA++NALK++ +V+V V + ++LTV D+G G + ++ H+G+ Sbjct: 599 QHHLLRIAREAVNNALKYALPQKVIVKVETDAQVLRLTVADDGKGFDPSKMSVSGGHFGL 658 Query: 554 IIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 MR+R++ L + ++ GGT V +T Sbjct: 659 QGMRERSRKLHTELSLQSTPGGGTSVGLTL 688 >UniRef50_Q1GZT2 Putative signal transduction histidine kinase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GZT2_METFK Length = 479 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 108/200 (54%), Gaps = 9/200 (4%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSC----LQMQGDALPESSRELLSQIRNELNASWAQ 444 +ER IA+E+HD + +L+ +++ +S L + + L +R+L + + + A+ Sbjct: 272 KERLKIAQEVHDDLGGNLTAIRLGLSSMIKRLGPEQEVLLAKARQLEAIVDDTFEAA--- 328 Query: 445 LRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAR 504 + + R + E G+ ALE ++ K G P + + + + AI L +I + Sbjct: 329 -HRIASDLRPNVLELGIVAALEWQATQFVDKIGIPCEFVCNVAEVDISTDHAITLFRICQ 387 Query: 505 EALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSL 563 EA+SN K+++AS V VT+ + ++ + V D+G G+ P + +++N +G+ M +RA +L Sbjct: 388 EAMSNIAKYAKASHVEVTLEASAEEIMMQVIDDGIGIAPVDRLKANAFGISGMSERAVAL 447 Query: 564 RGDCRVRRRESGGTEVVVTF 583 G C+V+ GGT V VT Sbjct: 448 AGQCKVQAGRQGGTIVSVTL 467 >UniRef50_D2B7Q9 Histidine kinase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B7Q9_STRRD Length = 412 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 2/194 (1%) Query: 387 VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLR 446 V++ER +ARE+HD++AQ L+ + Q+ + Q +P R ++N S A+ R Sbjct: 207 VLDERQRMAREIHDTLAQGLTGIIAQLQAAE-QMHEVPAPWRRPFGAVKNLARESLAEAR 265 Query: 447 ELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 + R + L L AL + +S G PV++ R + LL+ A+E Sbjct: 266 RSVDALRPEPLQTARLSDALAGVADRWSKLHGLPVQVTTTGTARPMTPEAEFALLRTAQE 325 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRG 565 AL+N KH+ AS V VT++ + +V L V+D+G G ++ + +G+ IMR R + L G Sbjct: 326 ALANVAKHAGASRVGVTLSYLEQEVALDVRDDGKGFDLASLEAGGFGLTIMRQRVEGLSG 385 Query: 566 DCRVRRRESGGTEV 579 RV G + Sbjct: 386 SLRVESEPGAGAGI 399 >UniRef50_A4X9X2 ATP-binding region, ATPase domain protein domain protein n=2 Tax=Salinispora RepID=A4X9X2_SALTO Length = 563 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 104/219 (47%), Gaps = 10/219 (4%) Query: 383 QQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASW 442 + L EER +ARE+HD +AQ L + + E + E L +R E+ Sbjct: 345 RSLATNEERQRLAREIHDGVAQELVMVGYGIDNALATVHEDTEETAESLRGLRQEVTRVI 404 Query: 443 AQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLP-----PRLVPSHQAI 497 +LR L R ++ G L A+ EY+ G L L RL P+ Sbjct: 405 TELRLSLFELRSEVDRHG---GLAAAIAEYARTVGVSGGLRVHLSLDESTARL-PATTEA 460 Query: 498 HLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMR 557 LL+IA+EA++NA KH+ A+ + VT A + ++ V D+G G+ + HYG+ IM Sbjct: 461 ELLRIAQEAVANARKHASAANLWVTCAVDPPYAQIEVSDDGHGISDQHT-DGHYGLAIMA 519 Query: 558 DRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDT 596 +RA+ +RG +R R+ GT V V +V+G T Sbjct: 520 ERAERIRGRLEIRPRQPSGTTVTVVVGSSPQRDNVRGST 558 >UniRef50_A1AXR2 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=4 Tax=Gammaproteobacteria RepID=A1AXR2_RUTMC Length = 494 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 138/269 (51%), Gaps = 20/269 (7%) Query: 321 LPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQE 380 +P+ G TL + + TLP L+ D++ L+ ++ E + L R Sbjct: 236 IPLKYHGKTLG--------TFNLFFDTLPS---LTFDERALLSSIAENIAIALDKARLDA 284 Query: 381 RQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL--QMQGDALPESSRELLSQIRNEL 438 + +++ + +ER +++E+HDS+AQ++ +K+QV+ L ++ ++S ++LS +++ + Sbjct: 285 QTKRMELSQERLFLSQEIHDSLAQTIYSLKLQVTVLGNMLKTGKKSDASDKVLS-LQSNI 343 Query: 439 NASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIH 498 + +LREL+ FR+ L G+ +L + ++ G L + ++ P + + Sbjct: 344 TQANQELRELMCNFRMPLDPKGIEVSLTNLLNRFMSEEGITTYLQVEGKLQVSPEVE-MQ 402 Query: 499 LLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP----ENAIRSNHYGMI 554 +++I +EALSN KH++A V V + N +L ++D+G G E+ I N+ GM Sbjct: 403 IMRIIQEALSNIRKHAKARNVRVLLLVEPN-CQLLIEDDGIGFEKDQNESEIMGNNIGMN 461 Query: 555 IMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 IM++RA + + GT V+V Sbjct: 462 IMKERAIRIGASIEIESEVDEGTCVIVNL 490 >UniRef50_Q81FX4 Two-component sensor protein yvqE n=44 Tax=Bacillus cereus group RepID=Q81FX4_BACCR Length = 351 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 105/203 (51%), Gaps = 3/203 (1%) Query: 380 ERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELN 439 E +Q + +ER +ARELHDS++Q L M M +S + Q P+ +++ L + N + Sbjct: 139 EEMRQEAISQERHRLARELHDSVSQQLFAMSMMMSAINEQITEFPDVTKKQLQLVENMVV 198 Query: 440 ASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIH 498 + +++R LL R +QL L +E E S K +K+++ + P + H Sbjct: 199 NAQSEMRALLLHLRPVQLEGKKLTEGIEELLTELSRKQ--HMKIEWLIEPIELKKGVEDH 256 Query: 499 LLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRD 558 L +I +EALSN L+H++A + V + + D L + D+G G ++ YG+ M++ Sbjct: 257 LFRIVQEALSNTLRHAKAKKTEVRLRKIDQYAILKIIDDGVGFEVGVNKAGSYGLRSMQE 316 Query: 559 RAQSLRGDCRVRRRESGGTEVVV 581 R + G +V + GT++ V Sbjct: 317 RVHEIGGTLKVLSFPAKGTQIEV 339 >UniRef50_C3B362 Two-component sensor protein yhcY n=4 Tax=Bacillus RepID=C3B362_BACMY Length = 374 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 118/243 (48%), Gaps = 9/243 (3%) Query: 340 QYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELH 399 ++G+L P H S ++ L++ + Q+ T+ R E++++ +++ ER +AR+LH Sbjct: 136 KFGLLNVASPHKTHFSEEELALLEAIAFQIGTTIQRIRLVEKERKYVIVAERNRLARDLH 195 Query: 400 DSIAQSL-SCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTE 458 DS+ Q L S M L M D +EL +R S L+E+ T QL Sbjct: 196 DSVKQLLFSIMLTARGTLDMAKD------KELQEMLRYIGELSQEALQEM-TLLIWQLRP 248 Query: 459 PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASE 518 GL L + + Y G V + + + + L ++++EAL N KH+ Sbjct: 249 EGLEKGLAEAVQNYGKLLGIQVAIRIDGVISIGDEIEEV-LWRVSQEALHNCKKHASCER 307 Query: 519 VVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTE 578 V V++ +N++ ++D+G G +R + G+ M++R + ++G R+R + GT+ Sbjct: 308 VSVSLKIENNKLNFQIEDDGIGFIRETVRDSALGLKSMKERIELMKGTFRIRTKPGQGTK 367 Query: 579 VVV 581 + + Sbjct: 368 IEI 370 >UniRef50_A9B1S5 Multi-sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B1S5_HERA2 Length = 665 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 83/278 (29%), Positives = 130/278 (46%), Gaps = 11/278 (3%) Query: 311 KGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLT 370 +GC V P T L L+ G++L P R QQLV L E L Sbjct: 388 QGCARVIHAVSPTIPYQTLLALPLSIKEQVLGVVLVATPD-RDAPFGPQQLV--LAEGLA 444 Query: 371 ATLALDRHQER----QQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPES 426 + A+ Q R ++ EER+ +ARELHDS+ Q+L M + + Q + P Sbjct: 445 TSAAIAIEQARLYDQARRAAQAEERSRLARELHDSVTQTLFSMTLTAEAARAQVERNPVR 504 Query: 427 SRELLSQIRNELNASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQ 485 + + +++ + S ++RELL R L E G+ +L +A+ + L+ + Sbjct: 505 AATQIDRLKAAAHQSLGEMRELLLQLRPTPLQEHGIIKSLRDHIASLNAQ-EVAINLECE 563 Query: 486 LPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV-PEN 544 ++ A L +IA+EA++NAL+H+QA+ V V+ + L V+DNGCG P+ Sbjct: 564 GEDSVLSPANAAGLYRIAQEAIANALRHAQATNVRVSFSFASKSTTLMVKDNGCGFDPDL 623 Query: 545 AIRSN-HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 RS H G+ M +RA L G V+ GT + V Sbjct: 624 LERSGRHLGLTSMAERAGELGGTLDVQSVVGEGTCLTV 661 >UniRef50_C6XAR1 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAR1_METSD Length = 465 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 132/261 (50%), Gaps = 15/261 (5%) Query: 326 RGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQL 385 RG+ +K L + Q+G ++ + Q ++ + ++ + E L+A L + QER++ Sbjct: 215 RGSPIK--LHNGEVQWGGIITNITQSKNEKLEIERSRQRMAE-LSAHLTQVKEQERRR-- 269 Query: 386 IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQL 445 IARE+HD + +L+ +K+ ++ + + + E + + ++ ++ + Sbjct: 270 --------IAREIHDDLGGNLTAIKIGLTSIIKRINPDEPKLVEKALNLESIVDRTFDIV 321 Query: 446 RELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 + + R + E G+ ALE C ++ +F P + V + +AI L +I +E Sbjct: 322 HRIASDLRPDVLELGIVAALEWQCGQFEKQFSLPCRFYSSQTELAVSADEAITLFRICQE 381 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP-ENAIRSNHYGMIIMRDRAQSLR 564 A+SN KH++A +V V + D + L + D+G G+ ++ ++N +G+ MR+R +L Sbjct: 382 AMSNIAKHARARQVEVELLVEDRDIMLRIVDDGQGIRMQDQHKANSFGLRGMRERVAALD 441 Query: 565 GDCRVRRRESGGTEVVVTFIP 585 G V +R GGT V V IP Sbjct: 442 GSLEVEKRVRGGTAVQVK-IP 461 >UniRef50_D2PPC0 Histidine kinase n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PPC0_9ACTO Length = 405 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 9/215 (4%) Query: 375 LDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQI 434 L+R ++R+ L V ER IARE+HD +A LS M +Q DA PE +++ L+ I Sbjct: 180 LERDRDREAALAVSNERTRIAREIHDVVAHGLSIMIVQADGGLYAADASPEQAKKALATI 239 Query: 435 RNELNASWAQLRELLTTFR------LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQL-- 486 + AS ++R++L + L +P +P +++ E + +DYQ+ Sbjct: 240 GDTGRASLTEMRKMLGLLKQDEQNELDPDQPRPQPGVDSLPELIENVREAGLSVDYQVTG 299 Query: 487 PPRLVPSHQAIHLLQIAREALSNALKHS-QASEVVVTVAQNDNQVKLTVQDNGCGVPENA 545 PR +P+ + +I +E L+N LKH+ + VT+ + + V D+G G + Sbjct: 300 TPRDLPALLGLTAYRIVQEGLTNTLKHAGPGAHACVTLHFGREMLTVVVTDDGRGAGVAS 359 Query: 546 IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVV 580 +G++ MR RA G + GG EVV Sbjct: 360 SSDPGHGLVGMRQRASISGGTVSAGPKAGGGYEVV 394 >UniRef50_UPI0001692C7B sensor histidine kinase n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692C7B Length = 344 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 5/206 (2%) Query: 383 QQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASW 442 +Q +MEER +AR+LHD+++Q L + M S L + P + ++ Q+ + + Sbjct: 135 KQEAIMEERRRLARDLHDTVSQELFAIHMSASSLPKICEVNPRGAEHVMQQLIQMSHHAQ 194 Query: 443 AQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQL-PPRLVPSHQAIHLL 500 Q+R L++ R ++L L A+ EY L+ +L P P Q + L Sbjct: 195 KQMRGLISQLRPIELNGSTLEEAIGRWFLEYCRANELQGHLEVELNEPMSEPIEQQLFL- 253 Query: 501 QIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRA 560 I +E ++N +KH+ ASEV +++ + ++Q + +QDNG G + ++ S +G+ MR+R+ Sbjct: 254 -IIQEGMANIVKHAAASEVYLSIHELEHQYVMQLQDNGHGFEQKSVTSASHGLATMRERS 312 Query: 561 QSLRGDCRVRRRESGGTEVVVTFIPE 586 + L G + ++ GT V V IP+ Sbjct: 313 EKLGGTTEIISKQGAGTRVKVQ-IPK 337 >UniRef50_C0GH42 Multi-sensor signal transduction histidine kinase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GH42_9FIRM Length = 651 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 5/198 (2%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLREL 448 EER I+RELHDS AQSL + Q+ + D L L + ++ A ++R+ Sbjct: 438 EERLRISRELHDSTAQSLIVVLHQLEKYLVSSDHLRLGDSRFLFNVAEQVKAILQEVRQF 497 Query: 449 LTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 R L + GL P+LE +E + G V L+ +++ + L +I +EAL Sbjct: 498 SRDLRPSILDDLGLVPSLEWYIDELNRTHGLKVDLNIIGQKQMLRPEIRVSLFRIIQEAL 557 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPE----NAIRSNHYGMIIMRDRAQSL 563 N ++H++A+ V + ++N+V++ VQDNG G + +R+ G+ M +RA+ L Sbjct: 558 RNVMRHAEANNAKVKIEFDNNEVRVVVQDNGKGFDAEPLGDLLRNGKLGLAGMHERAKIL 617 Query: 564 RGDCRVRRRESGGTEVVV 581 G + + GT + + Sbjct: 618 GGSIEISSAKGAGTTIFI 635 >UniRef50_D1UN54 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UN54_9BURK Length = 610 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 114/461 (24%), Positives = 199/461 (43%), Gaps = 57/461 (12%) Query: 159 MAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNN 218 +A +A L T++ L + P +L M ++ + R + +E+ L +N Sbjct: 163 IAAVVATLYAATLVLLNGMVRSPINRLEEMVDRIAAGNLDVRCAVESDDELGRLAARVNA 222 Query: 219 MSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNL 278 M+ L ES A L + Q+ + +E+ + + RLH R E +P + L Sbjct: 223 MADRLRESTARLYESEQKYRSIVENALEGIF-------RLH-RNGWLEEANPAMARLLGY 274 Query: 279 TLLRDIELRVYDTDDEENHQEFTCQPDMTCDDK--GCQLCPRGVLPVGDRGTTLKW---- 332 R + V E + + FT Q ++ G LP+ T+ W Sbjct: 275 DSARAL---VAAGTREPDKRPFTPQQVEGLFERLDGSGEIAELELPLARADGTVIWVQLS 331 Query: 333 --RLADSH---TQYGILLATLPQGR----HLSHDQQQLVDTLVEQLTATLALDRHQERQQ 383 +ADS + A + R HL + +L + E+ L +E + Sbjct: 332 ARGVADSSGAIVRLDGFFADVTARRQALDHLRRHRDELQAEVAERKRTEQELRASREELR 391 Query: 384 QL------IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESS------RELL 431 +L I EER IA E+HD + Q L+ +K+ +S LQM+ PE+ REL+ Sbjct: 392 ELSWHLEVIREEERKRIALEVHDELGQLLTALKIDISLLQMRLAGNPEAQGKTDAMRELI 451 Query: 432 SQ----IRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLP 487 + +RN N LR F GL ALE ++++A++ + Sbjct: 452 ERTMWMVRNVAN----HLRPAALNF-------GLVSALEWLAQDFNARYYIQCTVVTHGD 500 Query: 488 PRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR 547 ++ +A + +IA+E+L+N +H++AS VV+T+ + + L ++D+GCG +A+ Sbjct: 501 EPVLEDARATAIFRIAQESLTNVARHARASHVVLTLRSGEGFIDLEIRDDGCGFDRDAVS 560 Query: 548 S---NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 + YG++ M +RA+ + G + S GT VV IP Sbjct: 561 ARQRGSYGLLGMAERARLIGGALTITSGASTGT-VVALRIP 600 >UniRef50_C0XNJ5 Two component system histidine kinase n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XNJ5_9CORY Length = 412 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 23/246 (9%) Query: 354 LSHDQQQLVDTLVEQLTATLALDRHQ--ERQQQLIVMEERATIARELHDSIAQSLSCMKM 411 +S +++ L+D L+ R Q E +++ V +ER +A E+HD++AQ LS ++M Sbjct: 166 VSKERESLIDELLTT--------RQQLAETEREAGVSQERERLAHEIHDTVAQGLSSIQM 217 Query: 412 QVSCLQMQGDA--LPES----SRELLSQIRNELNASWAQLRELLTTFR-LQLTEPGLRPA 464 + DA LP ++ + R +++ A+ R ++ LTE LR A Sbjct: 218 LLHAADRDLDATGLPPGELARAKSRIETARRAASSNLAETRAMIAALTPAPLTEASLRQA 277 Query: 465 LEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVA 524 LE ++S G ++++ +P LL+IA+ A+SNA++HS A+ + VT+ Sbjct: 278 LERIARDFSQASGIGIEVESDGEHTPLPMRCEAGLLRIAQGAVSNAVQHSGATRIRVTLT 337 Query: 525 QNDNQVKLTVQDNGCGVPENAIRS-----NHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 + ++V+L V DNG G A+ S H G+ MR RA+ L G+ V GG Sbjct: 338 YSPDEVRLDVVDNGRGFDPLALESAPTGLGHLGLSAMRSRAEELGGELIV-ESAPGGPTA 396 Query: 580 VVTFIP 585 V IP Sbjct: 397 VTAAIP 402 >UniRef50_A1WYG6 Histidine kinase n=1 Tax=Halorhodospira halophila SL1 RepID=A1WYG6_HALHL Length = 475 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 8/212 (3%) Query: 360 QLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ-- 417 ++++ + QL A +A R + R Q + EER +A ELHD++AQ ++ ++++V L+ Sbjct: 217 RMLEWIGHQLGAAIARVRDEYRSHQGALQEERNLLAHELHDTVAQEVATLRLRVRQLEER 276 Query: 418 MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFG 477 +GDA + L +R L+ + Q+R ++ FR Q L AL + G Sbjct: 277 ARGDADTAALLAPLEDLRTRLDHTNDQVRTVMQQFRTQALGTPLETALSRLANRFRRDSG 336 Query: 478 FPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDN 537 V+L ++ P + + +H+ +I EALSNA H A V + + + L ++D+ Sbjct: 337 IEVRLIHRWPELALGEREQLHIHRIVEEALSNAWHHGGARNVRLQLETPGGDLCLLIEDD 396 Query: 538 GCG-----VPE-NAIRSNHYGMIIMRDRAQSL 563 GCG VP+ + S +G+ MR+RA+ L Sbjct: 397 GCGFVVDDVPDSDPAESRGHGLRGMRERARHL 428 >UniRef50_B5HYF1 Two-component system sensor kinase n=10 Tax=Streptomyces RepID=B5HYF1_9ACTO Length = 400 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 12/217 (5%) Query: 375 LDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQI 434 L++ +E Q ++ V ERA IARELHD +A ++S M +Q DA P+ +++ L I Sbjct: 174 LEKEREAQAKVAVAAERARIARELHDVVAHNVSVMVVQADGAAYVLDAAPDQAKKALETI 233 Query: 435 RNELNASWAQLRELLTTFRLQLTEPGLRPALEASCE------EYSAKFGFPVKLDYQLPP 488 + + A++R LL R + G + E E G PV + P Sbjct: 234 SSTGRQALAEMRRLLGVLRTGEHQEGGEYVPQPDVEQIEDLVEQCRGSGLPVDFKIEGTP 293 Query: 489 RLVPSHQAIHLLQIAREALSNALKHSQA-SEVVVTVAQNDNQVKLTVQDNGCGVP----- 542 R +PS + +I +EAL+N KH + V + D+ + L V+D+G G P Sbjct: 294 RPLPSGVELTAYRIVQEALTNTRKHGGPNAGASVRLVYFDDGLGLLVEDDGKGAPHELYE 353 Query: 543 ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 E +G+I MR+R + G R GG + Sbjct: 354 EGGADGAGHGLIGMRERVGMVGGTLDAGPRPGGGFRI 390 >UniRef50_Q1IRP5 Multi-sensor signal transduction histidine kinase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRP5_ACIBL Length = 673 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 14/210 (6%) Query: 380 ERQQQLIVMEER--ATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIR-- 435 + Q+LI +E+ A IARELHD I Q ++ + +Q+ C+ D E+ EL IR Sbjct: 463 QMNQKLIAAQEKECARIARELHDDINQRIALLVIQMQCM---ADGSTETPSELQEHIRQL 519 Query: 436 ----NELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLV 491 E++ L L + +L+ G+ A+ C E +A VK ++ P + Sbjct: 520 SLQATEISHDVQALSHRLHSSKLEYL--GILTAISGHCRETAALNKVDVKFEHTDPLPKI 577 Query: 492 PSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV-PENAIRSNH 550 S A+ L ++ +EAL NA+KHSQ+ V +A N+N++ L + D G G P+ A+ + Sbjct: 578 SSDAALCLFRVLQEALRNAVKHSQSKTFAVRLAGNENEMTLNISDCGIGFDPDYAVIGSG 637 Query: 551 YGMIIMRDRAQSLRGDCRVRRRESGGTEVV 580 G++ M++R + + G + + GT V+ Sbjct: 638 LGLVSMQERLRLVGGAFAIDSHPARGTTVL 667 >UniRef50_UPI00017449FC GAF domain protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017449FC Length = 690 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 101/218 (46%), Gaps = 15/218 (6%) Query: 387 VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPE-SSREL------LSQIRNELN 439 V +ER IARELHD+I Q L+ + +Q+ + + PE +SR L L R E Sbjct: 477 VKDERERIARELHDTIEQELAGLSIQLRNARQRIATAPEQASRSLGLAEQMLRHCREEAR 536 Query: 440 ASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHL 499 S LR R GL ALE + + G L+ + P + IHL Sbjct: 537 TSIRDLRSTALELR------GLHGALEEMLTPLATEAGAHFSLEVKGEPYHLAGPSEIHL 590 Query: 500 LQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS-NHYGMIIMRD 558 L+IA EA++NA +H+ + VT+ V L ++D+GCG +A H+GM+ +R+ Sbjct: 591 LRIAHEAVANAARHASPRLIQVTIEFTPETVSLEIEDDGCGFDTDAPAPRGHFGMLGIRE 650 Query: 559 RAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDT 596 R L+G + GT + V +P + G T Sbjct: 651 RVNKLQGTLQTHSEPGKGTRIHV-VVPSEVAKRSNGST 687 >UniRef50_B9TKD1 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TKD1_RICCO Length = 383 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 25/288 (8%) Query: 308 CDDKGCQLCPRGVLPVGDRGTTL-KWRLADSHTQYGILLATLPQGRHLSHDQQ-QLVDTL 365 CDD +L +GV+ G L +W + D +L A HD++ + L Sbjct: 102 CDDYLSRL--KGVMETGKPDQILLEWVMPDQSVSTLLLHAVA------EHDEEGNTIGAL 153 Query: 366 V--EQLTATLALDRHQER---QQQLIVME-------ERATIARELHDSIAQSLSCMKMQV 413 V +T A +RH E Q Q++ ER IARE+HD + Q LS +++ + Sbjct: 154 VIGHNITELKASERHLEESRAQLQMLTYHREEAREGERKRIAREIHDELGQLLSVLRLGI 213 Query: 414 SCLQM-QGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEY 472 S L GD P+ R +++ ++ + + L T R + E G+ ALE +E+ Sbjct: 214 STLDYGYGDTNPDL-RNKTAKMGAVVDQAIDMVHTLATRLRPAVLESGIALALEWLVQEF 272 Query: 473 SAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKL 532 S G +L +A+ + +I +E+L+N L+HSQA V + + Q+ +KL Sbjct: 273 SKSTGIDCELSVPDEDIDFDKERALPVFRIVQESLTNILRHSQADHVEIELTQDQEHLKL 332 Query: 533 TVQDNGCGVP-ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 ++ DNG G A + +G+I M +R L G + GTE+ Sbjct: 333 SIHDNGQGFEVSKATKKGSFGIIGMHERILMLGGTLEISSSSEQGTEI 380 >UniRef50_B4DA10 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DA10_9BACT Length = 561 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 12/211 (5%) Query: 376 DRHQ-ERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ--MQGDALPESSRELLS 432 DR Q ERQ I ER + ++LHD + Q ++ + L + LP++ E+ Sbjct: 342 DRKQLERQILEISERERRRMGQDLHDGLGQQITGIIFHAHLLHKHLTTQGLPQA--EMAG 399 Query: 433 QIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLD--YQLP-PR 489 QI LN + Q R + LQ +P L A + ++ +D + P P Sbjct: 400 QIVELLNEAKIQARHIARG--LQPVDPAPN-GLMAGLDHFACTTSELYHIDCCFLCPEPV 456 Query: 490 LVPSHQ-AIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS 548 L+ H +IHL +IA+EA++NA +H A ++ + + + +Q+ L + D+GCG+P+ R Sbjct: 457 LIAEHTTSIHLFRIAQEAVANAFRHGGAQKIEIHLRETGDQLVLEIHDHGCGLPKLGRRR 516 Query: 549 NHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 GM M+ RA+++ G +RRR GGT V Sbjct: 517 EGLGMRFMKYRAETIGGAVDIRRRPGGGTMV 547 >UniRef50_A1AUQ4 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUQ4_PELPD Length = 489 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 113/203 (55%), Gaps = 6/203 (2%) Query: 384 QLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWA 443 Q + ER +AR++HD I QSL+ +K+ + + + A + +E ++++R + + Sbjct: 282 QTVQERERLAMARDIHDEIGQSLTVLKLDLEWIAHRLPAKESAVQERVNEMRWNIEQLTS 341 Query: 444 QLRELLTTFRLQLTEP-GLRPALEASCEEYSAKFGFP--VKLDYQLPPRLVPSHQAIHLL 500 ++ + R L + GL A++ E+S + G V L+ ++ P L P A ++ Sbjct: 342 AVQRIAADLRPPLLDSLGLAAAIDWHVAEFSRRSGIECFVMLNEEVDP-LEP-QLATAVM 399 Query: 501 QIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDR 559 +I +E L+N L+H++A+EV V++ + D Q+ L + DNG G+ PE YG++ M++R Sbjct: 400 RIVQEGLTNVLRHARATEVSVSLCKRDGQLVLEIGDNGRGIRPEEIESPQAYGLMGMQER 459 Query: 560 AQSLRGDCRVRRRESGGTEVVVT 582 A+ RG+ V E GGT + VT Sbjct: 460 ARICRGELTVGGAEGGGTLLRVT 482 >UniRef50_B4DAE0 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAE0_9BACT Length = 340 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 74/260 (28%), Positives = 117/260 (45%), Gaps = 25/260 (9%) Query: 332 WRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALD----RHQERQQQLIV 387 W A YGI++ L H Q ++ V Q T+ LA + ER+ I Sbjct: 86 WNAAILAAIYGIVVHLLCA----LHALQMELEARVAQRTSALANANVELKAMEREVMEIT 141 Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRE 447 ER I +LHDS+ Q L+ + + L + ES+ L+ + L QLRE Sbjct: 142 ERERQRIGEDLHDSLGQKLTAASLTANALVL------ESTTAELTSLAEGLGR---QLRE 192 Query: 448 LLTTFR--------LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHL 499 + R + L + GL AL A + + G D P + S A Sbjct: 193 AIAETRTLSHGLAPVSLQDDGLMHALHALADSTTQAVGVRCVFDCPAPVPVTNSTIAFQF 252 Query: 500 LQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDR 559 +IA+EA++NA+KH+ ASE+ + + ++ + + V+D+G G+PE S G+ +MR R Sbjct: 253 YRIAQEAVNNAVKHATASEIRIGLERHGETITVEVEDDGTGLPEPVPASKGIGLRVMRHR 312 Query: 560 AQSLRGDCRVRRRESGGTEV 579 Q + G + +GGT V Sbjct: 313 TQLISGTLEIGSSPAGGTRV 332 >UniRef50_C8X7N0 Histidine kinase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X7N0_NAKMY Length = 343 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 104/197 (52%), Gaps = 10/197 (5%) Query: 390 ERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELL 449 ER I +ELHD I Q L+ + +Q+ L+ D LPE +R L QI++E+ A+ ++ L Sbjct: 145 ERRRIGQELHDEIGQRLTGILLQLRGLR---DGLPEQARPQLHQIQSEVRATLDEVGALA 201 Query: 450 TTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRL--VPSHQAIHLLQIAREA 506 R L + GLR ALEA C+ A + LP R +PS + ++A+EA Sbjct: 202 WQLRPGILDDLGLRRALEALCDTLRAHA--TARFVLHLPARTPSLPSEVELAFYRVAQEA 259 Query: 507 LSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGD 566 L+NA++H+ AS + V+++ +V L + D+G G+ + G+ MR+RA + Sbjct: 260 LTNAVRHAHASTISVSLSARGRRVALDIVDDGTGLADGT--EEGAGIRGMRERALLIGAR 317 Query: 567 CRVRRRESGGTEVVVTF 583 VR + G +V +T Sbjct: 318 IAVRSLPTHGVQVTLTL 334 >UniRef50_C4DM39 Signal transduction histidine kinase, COG4585 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DM39_9ACTO Length = 378 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 18/217 (8%) Query: 374 ALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSC----LQMQGDALPESSRE 429 A DR + +++ + EER IARE+HD + SL+ +++ L G A+P E Sbjct: 158 ARDRAKLEERRRYLSEERLHIAREVHDVVGHSLTAIRLHAGVALHVLHRDGVAVPAEVTE 217 Query: 430 LLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPAL-----EASCEE--YSAKFGFPVKL 482 L+ IR+ +A+ +LR L TE RP L EA+ S + V + Sbjct: 218 SLTAIRDSGSAALDELRATLAPLAAAETE---RPVLTLEDVEAAVTAALTSDELAIDVTV 274 Query: 483 DYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP 542 D Q +PS +I +E+L+N +KH+ AS V V +A V + V DNG G P Sbjct: 275 DGQR--EAIPSVVDSAGYRIVQESLTNVVKHAGASRVAVDIAYAPGLVTIEVVDNGHGAP 332 Query: 543 ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 ++ R+ +G+ M +RA +L G R+ GG V Sbjct: 333 DS--RAEGHGLAGMAERATALGGSFTAGPRDGGGYAV 367 >UniRef50_C1F5E9 Two-component system sensor protein, putative n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5E9_ACIC5 Length = 987 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 16/215 (7%) Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRE 447 M ER IARELHD++ Q++ + + +S Q + S++R EL S Sbjct: 770 MTERMRIARELHDTLLQAMQGLVLSISSFSSQA--------VVSSEVREELERSLDHADR 821 Query: 448 LLTTFRLQL----TEPGLRPALEASCEEYSAK-FGFP---VKLDYQLPPRLVPSHQAIHL 499 LL + R ++ E G L AS ++ FG V+ + R + + + Sbjct: 822 LLVSGRNRIRDLRGEGGESETLLASLSTLVSQIFGSASSKVRFTCEGIARPIHAFAREEV 881 Query: 500 LQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDR 559 L IA EALSNA HS A EV V V+ +DN ++ ++DNG G A H+G+ MR+R Sbjct: 882 LMIASEALSNACFHSDADEVQVQVSYHDNAFRIAIRDNGNGFDAGASPEGHFGIRGMRER 941 Query: 560 AQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQG 594 A + V+ GTEV VT E+ + G Sbjct: 942 AADIGAHLEVQSAPGHGTEVCVTVAAERAYEQPSG 976 >UniRef50_B2JH43 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Burkholderia phymatum STM815 RepID=B2JH43_BURP8 Length = 493 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 12/203 (5%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDA------LPESSRELLSQIRNELNASW 442 EE+ IARELHD + Q L+ +KM LQ +A +R L+ Q + ++A Sbjct: 287 EEKKRIARELHDDLGQQLTALKMSAVILQQDVEAGHYTAETAAKARGLVVQADDTMSA-- 344 Query: 443 AQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQ 501 LR + + R L + GL PA+E +E+S ++G + + + Sbjct: 345 --LRRIASNLRPTMLDDLGLLPAVEWLADEFSRRYGIKASTRLSAGELAFSDTASTAIFR 402 Query: 502 IAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN-AIRSNHYGMIIMRDRA 560 I +EAL+N +H+ A+EVVVT+ +DN ++ + DNG G + + +G++ +R+R Sbjct: 403 IVQEALTNVARHACATEVVVTIELDDNACEVRIDDNGRGAASAPGDKPDSFGLLGIRERV 462 Query: 561 QSLRGDCRVRRRESGGTEVVVTF 583 + L G + R G V + F Sbjct: 463 RQLNGTVSLGNRLDRGFRVQIRF 485 >UniRef50_Q67JS1 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67JS1_SYMTH Length = 368 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 13/222 (5%) Query: 380 ERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESS-RELLSQIRNEL 438 E QQ+ +++ ER IA++LHD AQ+ + +++ L GD P RE L ++R Sbjct: 146 EAQQRQLLLSERNRIAQDLHDRAAQTAYLVALKLDWLL--GDLPPADPLREELERLRGLA 203 Query: 439 NASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAI 497 + AQ RE + R +L+E GL L E + + GF +L PR +P+ Sbjct: 204 AEAAAQTREAIFALRAPELSEGGLHGGLRRLLRE-AERDGFTTRLTVAGRPRALPAEVED 262 Query: 498 HLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPE--NAIRSNHYGMII 555 L ++ +EAL+NA KHS S V+V + V L VQDNG G+ + + +G+ Sbjct: 263 ALFKVGQEALTNARKHSGGSAVMVALRYEPAAVTLVVQDNGAGIKNRTDIEKPGRFGVRG 322 Query: 556 MRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTH 597 MR+R L G + + GG +V +P K DTH Sbjct: 323 MRERVARLGGRLELVDGDEGGL-LVRASVPLKGV-----DTH 358 >UniRef50_B2AKD3 Putative multi-sensor signal transduction histidine kinase n=1 Tax=Cupriavidus taiwanensis RepID=B2AKD3_CUPTR Length = 608 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 102/199 (51%), Gaps = 6/199 (3%) Query: 382 QQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSREL--LSQIRNELN 439 Q+ I EER IA E+HD + Q L+ +KM +S L MQ LP S + ++R + Sbjct: 397 HQEAIREEERKCIAMEIHDELGQLLTALKMDLSLLSMQ---LPTGSGVIQKAEEMRELIE 453 Query: 440 ASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHL 499 + +R +++ R GL ALE ++S P + P +P +A + Sbjct: 454 QTIRIVRNVVSHLRPTALNYGLASALEWLAADFSRHTKIPCRFQSTHPEPNLPDPRATAI 513 Query: 500 LQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNH-YGMIIMRD 558 +I +E+L+N +H++AS+V VT+A D +++ ++DNG G + R+ + YG+ M + Sbjct: 514 FRIVQESLTNVARHAKASQVDVTLANTDAGIEVIIRDNGQGFNVVSARAGYSYGLHGMAE 573 Query: 559 RAQSLRGDCRVRRRESGGT 577 RA+ + V + GT Sbjct: 574 RARLIGAQLEVHSKPDRGT 592 >UniRef50_A5FQK5 Multi-sensor signal transduction histidine kinase n=5 Tax=Dehalococcoides RepID=A5FQK5_DEHSB Length = 1229 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 5/195 (2%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLREL 448 EERATIARELHD + QSL+ +K+ L D+LP+ S +LL++ + ++ + +R + Sbjct: 1022 EERATIARELHDQVGQSLTVLKL---MLDKAKDSLPDRSEKLLAEAQPLVSELISSVRNM 1078 Query: 449 LTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 R + L + GL PAL + +S++ G V + R + +I +EAL Sbjct: 1079 SLDLRPRMLDDLGLLPALLWYFDRFSSQTGINVNFQHAGLKRKFSPQLGTAVYRIIQEAL 1138 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGD 566 +N ++++ V+V + NQ+ L +QD+G G P G+ M++R + L G Sbjct: 1139 TNVVRYAGVDHVLVRARADKNQLALVIQDSGKGFNPAQRATGMSSGLKGMKERVRFLGGK 1198 Query: 567 CRVRRRESGGTEVVV 581 + + GT ++V Sbjct: 1199 LDIESKPGEGTHIIV 1213 >UniRef50_C4DDE2 Signal transduction histidine kinase, COG4585 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDE2_9ACTO Length = 380 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 105/210 (50%), Gaps = 16/210 (7%) Query: 376 DRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIR 435 +R +E Q EER IARELHDS+ ++S + +Q S + PE + L IR Sbjct: 166 ERSKEELAQRRAAEERVRIARELHDSLTHAISVVNVQSSVALHMLNRQPEQAEASLRNIR 225 Query: 436 NELNASWAQLRELLTTFR-LQLTE----PGLRPALEASCEEYSAKFGFPVKLDYQLPPRL 490 AS +REL T R L++TE PG+ +L A E + + D Q P Sbjct: 226 ---AASQDAMRELRATLRALRMTEGDSTPGI-DSLPALVERSALTIAMDISPDRQALPET 281 Query: 491 VPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG-VPENAIRSN 549 V + +I +EAL+N+ +H++AS V +++ +D V T+ D+G G PE + Sbjct: 282 VDR----TVYRIVQEALTNSTRHARASAVDISIVVDDESVTTTITDDGIGPAPEGV--AE 335 Query: 550 HYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 G++ MR+R +L GD R GG +V Sbjct: 336 GLGLMGMRERVAALGGDLRPGPGPDGGFQV 365 >UniRef50_B6JD37 Signal transduction histidine kinase containing PAS/PAC sensor domain n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD37_OLICO Length = 358 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 7/242 (2%) Query: 340 QYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELH 399 + G ++ T+ R +S +++ D LV T AL + Q + EERA IARELH Sbjct: 105 ESGHIIGTVGISRDIS-ERKAAEDELVASRTQLRALSHYL----QTVREEERAHIARELH 159 Query: 400 DSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFR-LQLTE 458 D + Q+L+ MKM + L+ + A + + + ++ + S L+ + + R L L E Sbjct: 160 DELGQTLTAMKMDLVWLRERLSADNGALKPRVERLVGLADRSVTDLQRIASDLRPLMLDE 219 Query: 459 PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASE 518 GL A+ + + + + L + + +I +EAL+N ++HS A Sbjct: 220 LGLVSAVHWLTDTVAGQSNLNINLSFDREDLTYGPEVSTAAFRIVQEALTNIVRHSGARH 279 Query: 519 VVVTVAQNDNQVKLTVQDNGCGVPENAIRSN-HYGMIIMRDRAQSLRGDCRVRRRESGGT 577 V +T ++++ + + D+GCG+P A H+G++ M +RA L G V GGT Sbjct: 280 VTITACHAEDELHIEIVDDGCGLPPTAASPRLHHGLLGMHERANMLGGSVAVESAPGGGT 339 Query: 578 EV 579 V Sbjct: 340 RV 341 >UniRef50_C8XI21 GAF sensor signal transduction histidine kinase n=12 Tax=Actinomycetales RepID=C8XI21_NAKMY Length = 595 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 82/279 (29%), Positives = 130/279 (46%), Gaps = 23/279 (8%) Query: 316 CPRGVLPV-----GDRGTTLKWRLADSHTQYGILLATL-PQGRHLSHDQQQLVDTLVEQL 369 PR VL + G G + L G+LL P + LV T +Q Sbjct: 324 LPRNVLRLDFDLTGQFGPAMVLPLGTGEQISGVLLTVRRPGSDQFDEQELNLVSTFADQ- 382 Query: 370 TATLALDRHQER--QQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESS 427 A LALDR + + ++++ V+E+R IAR+LHD + Q L + L MQ E S Sbjct: 383 -AALALDRAESQLARREMEVLEDRDRIARDLHDHVIQRLFAI-----GLGMQSTHRREKS 436 Query: 428 RELLSQIRNELNASWAQLRELLTT-FRLQLT---EPGLRPALEASCEEYSAKFGFPVKLD 483 +++ + ++ ++E+ T F LQ EPGLR AL + + + Sbjct: 437 PHQAARLADHIDQLHDVIQEIRTAIFDLQAGPAQEPGLRSALNQVISDLTGDAALRTTVR 496 Query: 484 YQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPE 543 P ++P A + REA+SNA++H+QA+E+++TV+ D+ V + V DNG G+PE Sbjct: 497 MSGPLDVIPPDLAQDVQAALREAVSNAVRHAQATELIITVSVEDDLV-MDVTDNGVGLPE 555 Query: 544 NAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVT 582 RS + + A V R +GGT ++ T Sbjct: 556 TVARSGLHNLGRRAAAAGGA---LSVTRPPAGGTRLIWT 591 >UniRef50_B4D5C3 Histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5C3_9BACT Length = 697 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 12/232 (5%) Query: 373 LALDRHQERQQQLIV---------MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDAL 423 +A+ RH+ R Q I+ + ER IARELHD++ Q L+ + M + + L Sbjct: 465 VAMLRHRVRLQTAIISDRLRAEAALNERERIARELHDTVEQDLAAIGMHFEVITDRALEL 524 Query: 424 PESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKL 482 RE ++ S A + + R L E GL PALE + + +A G + Sbjct: 525 EPMVRENFEAAVRQVRRSQADMHHAVWDLRSGTLVERGLGPALEEALQLSAAHCGAVPEC 584 Query: 483 DYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP 542 P R +P HLL+I +EA+SNA++H+ + + + + + + V+D+GCG Sbjct: 585 KEYGPVRRLPGVIEHHLLRIGQEAMSNAVRHAAPKRISIALRYEGDTLTMRVEDDGCGFD 644 Query: 543 ENAIRSN--HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDV 592 A N +G++ MR+R + + G V+ G+ V V +F+ V Sbjct: 645 VEARSQNTARFGLMGMRERVERIGGRLSVQSTPGTGSVVEVVLRNAGSFSSV 696 >UniRef50_A9VI28 Histidine kinase n=10 Tax=Bacillus cereus group RepID=A9VI28_BACWK Length = 405 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 25/229 (10%) Query: 381 RQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL--QMQGDALPESSRELLSQIRNEL 438 R ++L + ER +AR+LHD++AQ L+ + MQ+ + MQ S +E++ Q Sbjct: 190 RVEELTLANERQRMARDLHDTLAQGLASLIMQLEAIDAHMQKGNTGRS-QEIMKQ----- 243 Query: 439 NASWAQLRELLTTFRLQL-----TEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPS 493 + + R+ L RL + T A++ + +S V+ Q PP + S Sbjct: 244 --TMVRARQTLHDARLVIDDLRHTTNSFNGAVKEEVQRFSEATSIHVRFTIQSPPH-ISS 300 Query: 494 HQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLT--VQDNGCGVPENAIRSN-- 549 H L + E L+N KHSQA++V + V D+ KLT V+DNG G I N Sbjct: 301 LVKEHCLYVISECLTNIAKHSQATDVNLKVEYIDDLEKLTIEVEDNGIGFDTRYIGKNPG 360 Query: 550 HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE 598 HYG+I + +R + ++G+ + + GT+V + +P + +GD+HE Sbjct: 361 HYGLIGLNERVRLIKGEIHILSEKMKGTKVYIQ-VP----INKEGDSHE 404 >UniRef50_B3U4S0 Response regulator receiver n=1 Tax=Candidatus Nitrospira defluvii RepID=B3U4S0_9BACT Length = 998 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 19/230 (8%) Query: 354 LSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQV 413 LSHDQ + +LTA L R EER IARE+HD + Q+L+ +K+++ Sbjct: 779 LSHDQ-------LRKLTARLESVRE----------EERILIAREIHDELGQALTGVKLEL 821 Query: 414 SCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFR-LQLTEPGLRPALEASCEEY 472 L Q + R+ L I ++ + ++ + T R + L + GL PA+E E+ Sbjct: 822 CLLHDQIAEVSPMMRKKLESISTLVDGTIQSVQRIATELRPVVLDQLGLIPAIEWQAHEF 881 Query: 473 SAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKL 532 A+ G LD L + + + +I +E L+N +H+QAS V +T+ + + L Sbjct: 882 QARTGIQCTLDVYLRAVTLSHAGSTAMFRIFQEILTNVARHAQASVVHITLQEQAGSLVL 941 Query: 533 TVQDNGCGVPENAIRSNH-YGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 V+DNG GV + + H G++ MR+RA L G+ GT V V Sbjct: 942 DVRDNGRGVTDAELADPHSLGLVGMRERALLLGGETIFTGSPGTGTAVRV 991 >UniRef50_Q2B2D2 Two-component sensor histidine kinase n=2 Tax=Bacillus RepID=Q2B2D2_9BACI Length = 345 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 387 VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLR 446 VMEER +AR+LHD ++Q L + M S D E +++ L +I + ++R Sbjct: 144 VMEERQRLARDLHDVVSQQLFALSMMSSAALKVFDRDSEKAKKQLKEISGIAAKAQGEMR 203 Query: 447 ELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAI--HLLQIA 503 LL R +QL++ L + E K +D+Q + +A HL ++ Sbjct: 204 ALLLHLRPIQLSDDTLCDGIIKLIHELRGK----TTIDFQASIDEIELSKAAEEHLFRVV 259 Query: 504 REALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSL 563 +EALSN L+H+ AS++ +T+ + ++ L + D+G G + R YG+ MR+R + + Sbjct: 260 QEALSNILRHADASKIKLTLTEKEDYTYLFIGDDGKGFDPHIERVASYGLKTMRERCEEI 319 Query: 564 RGDCRVRRRESGGTEVVVTFIPEK 587 G +R ++ GT + + IP K Sbjct: 320 GGIFNIRSKQGEGTYIEIR-IPLK 342 >UniRef50_P96685 Sensor histidine kinase ydfH n=4 Tax=Bacillus subtilis group RepID=YDFH_BACSU Length = 407 Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 59/225 (26%), Positives = 121/225 (53%), Gaps = 11/225 (4%) Query: 367 EQLTATLALDR----HQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ-GD 421 E++ A L L+R HQ+ +QL + ER +AR+LHD++AQ L + MQ+ + + Sbjct: 175 EKIKAQLTLERLELAHQQ-VEQLTLQNERQRMARDLHDTLAQGLVSLNMQLDAIHVHLAK 233 Query: 422 ALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPG-LRPALEASCEEYSAKFGFPV 480 E ++E++ Q + ++ A R + R + E G L+ + + + + G Sbjct: 234 GNTERAKEIIQQSMKRVKSTIADARSAIDDLRSKSEEIGVLKERITSLMDHFIESTGMAC 293 Query: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND-NQVKLTVQDNGC 539 LDY+L +++ A + I E ++NA KH++A + +++ ++ ++ LTV+DNG Sbjct: 294 LLDYRL-HQVLDVRTAENCYYIIGECMTNAAKHAEAKTIWISIWDDEKGRLHLTVKDNGK 352 Query: 540 G--VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVT 582 G V + + HYG++ +++R +++ G ++ + GT++ +T Sbjct: 353 GFDVEKGKKKRGHYGLLGIQERVRAINGQFNIKSTKLKGTQIEIT 397 >UniRef50_B9L456 Two-component sensor histidine kinase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L456_THERP Length = 415 Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 88/310 (28%), Positives = 140/310 (45%), Gaps = 35/310 (11%) Query: 303 QPDMTCDDKGCQL---CPRGVLPVGDR-GTTLKWRLADSHTQYGILLATLPQGRHLSHDQ 358 +P+++ D + L PRG PV G L+ R T I +A P G H Sbjct: 105 RPNISNDVRNDPLHRGAPRGHPPVETFLGVPLRVR---QQTIGMIGVANRPSGYDARH-- 159 Query: 359 QQLVDTLVEQLTATLALDRHQERQQQLI------------------VMEERATIARELHD 400 ++L+ T Q+ + R ERQ+Q+I + +ER IA +LHD Sbjct: 160 ERLLSTFANQVAVAIENARLYERQRQMIADLQQLHARLDAARVEALLHQERNRIAADLHD 219 Query: 401 SIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPG 460 +AQ + + ++ + + Q D +PE L +IR A++R ++ G Sbjct: 220 RVAQIMFGIGIEATWCRDQPD-VPEPVLRALDRIRELAARGAAEVRRVVYDLAEMPVGGG 278 Query: 461 -LRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEV 519 L + E Y ++ V+L + PR +P + + IA EAL+N +HS A Sbjct: 279 ELVERIRQLVEGYRSE-DLRVELVIEGKPRRLPPEREDAIFLIACEALTNVRRHSGADLA 337 Query: 520 VVTVAQNDNQVKLTVQDNGCGVPENAIRS----NHYGMIIMRDRAQSLRGDCRVRRRESG 575 +V++ + V L VQDNGCG+P + S H+G+ MR RA+++ G+ E G Sbjct: 338 IVSLHFTERSVILVVQDNGCGMPHTSFVSVRTAGHFGLRSMRRRAEAVGGELSWYNGEDG 397 Query: 576 GTEVVVTFIP 585 G VV IP Sbjct: 398 GF-VVRAVIP 406 >UniRef50_A8L3C7 Integral membrane sensor signal transduction histidine kinase n=3 Tax=Actinomycetales RepID=A8L3C7_FRASN Length = 439 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 19/222 (8%) Query: 375 LDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQI 434 L R +E+ ++ V EERA+IARELHD +A S++ M + V + P+ + + L+++ Sbjct: 170 LQREREQLARIAVHEERASIARELHDIVAHSVTVMLLGVRGARDVLRVSPDRADDTLARV 229 Query: 435 RNELNASWAQLRELLTTFRLQLTEPGLRPA-----LEASCEEYSAKFGFPVKLDYQLPPR 489 S +LR +LT R T RPA L+ +Y G P+ L R Sbjct: 230 ETNGEQSLVELRRILTVLRAPDTPADSRPAPSLTELDELVVDYR-DAGLPIHLRVTGERR 288 Query: 490 LVPSHQAIHLLQIAREALSNALKHSQASEVVVTVA----------QNDNQVKL--TVQDN 537 +P + + ++ +EAL+NALKHS+ V VT+A ND+ D Sbjct: 289 PLPGGVELCVYRVIQEALTNALKHSRPRHVTVTLAFLGWCLDVEVANDSTAPAPGPTGDG 348 Query: 538 GCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 +PE + H G+I MR+R L G+ R GG V Sbjct: 349 AGDMPETGNPAGH-GLIGMRERVGVLGGELEFGHRPGGGFRV 389 >UniRef50_A0K0P6 Putative signal transduction histidine kinase n=1 Tax=Arthrobacter sp. FB24 RepID=A0K0P6_ARTS2 Length = 624 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 78/244 (31%), Positives = 116/244 (47%), Gaps = 21/244 (8%) Query: 344 LLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVME---ERATIARELHD 400 L+A + L+ D Q + L +QL + + R +ER IV R + R+LHD Sbjct: 387 LMAAVRSATSLALDNQNMEQQLRDQL---IEVRRSRER----IVTAGDARRRELERDLHD 439 Query: 401 SIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELL-TTFRLQLTEP 459 Q L + M ++ + A P +EL+ Q +EL + A+LREL + L E Sbjct: 440 GAQQRLVAVSMDLARARRA--ATPAEMKELVDQASDELAVALAELRELARGVYPPSLRER 497 Query: 460 GLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEV 519 GL +L A E + P++LD LP R P + I EA++NA KH++AS + Sbjct: 498 GLAGSLTALAE----RSALPIELDVDLPQR-PPPQVELAAYFICAEAVTNAAKHARASNL 552 Query: 520 VVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 ++V D ++L V DNG G A G++ + DRA +L G V E GGT V Sbjct: 553 QISVTGADAGLRLHVTDNGIG---GASPGADGGLLGLADRAAALGGSLTVTSPEGGGTTV 609 Query: 580 VVTF 583 T Sbjct: 610 AATL 613 >UniRef50_A6SWF1 Sensory box histidine kinase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SWF1_JANMA Length = 626 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 17/292 (5%) Query: 305 DMTCDDKGCQLCPRGVLPVGDRG-TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVD 363 DMT D+ L R V+ G + +W D + A S + + V Sbjct: 338 DMTVDEYRAIL--RSVMTTGQPAEVSGRWTRPDGGI---VFFAVHAVAEFDSKGEAESVL 392 Query: 364 TLVEQLTATLALDRHQERQQQLI----------VMEERATIARELHDSIAQSLSCMKMQV 413 + +T+ + + + Q+L+ + +ER IARELHD +AQ LS ++M V Sbjct: 393 AISRNITSIIEAENQLRQSQKLLRQLADRSETSIEDERKHIARELHDDLAQHLSALRMNV 452 Query: 414 SCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYS 473 S ++++ L + + L+A+ R ++T R + G+ ALE +++S Sbjct: 453 SVMKLEFGHLSSAFSGQAETMIERLDATIKIARNVITALRPTALDMGIVQALEWLVKDFS 512 Query: 474 AKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLT 533 +L ++ A + +IA+E+L N +H++A V V ++ D L Sbjct: 513 THKEISCRLHIHDENLILSDRSATAIFRIAQESLRNISRHAEACNVDVNLSHKDGMCLLA 572 Query: 534 VQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 ++D+G G + N +G++ +++R L G + E GT + V IP Sbjct: 573 IRDDGRGFNTTNVPFNSFGLMGIKERVLILGGKVEIESEEGQGTTIRVN-IP 623 >UniRef50_C7MN85 Histidine kinase n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MN85_CRYCD Length = 404 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 71/237 (29%), Positives = 116/237 (48%), Gaps = 15/237 (6%) Query: 357 DQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL 416 D+Q D + +A+ + QE ER I+RELHD +AQ L + M + Sbjct: 166 DEQATTDQKNRPASGEVAIQQAQE--------SERRRISRELHDGLAQELLSVSMLIRQA 217 Query: 417 QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAK 475 +++ + S+ LL++ ++ L + +L R L L + GL AL A + Y Sbjct: 218 ELKQNN--PSTDTLLTEAQSTLRCLMDDIHKLSVELRPLALDDLGLSAALRAQAQLYCKT 275 Query: 476 FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQ 535 FG + + + + P H +IA+EAL NA K+SQ+ + V +A N+ + + + Sbjct: 276 FGPQIDVVDETNGQRFPHTIETHAYRIAQEALLNACKYSQSDHISVHIATNNTHLLIHIL 335 Query: 536 DNGCG--VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFT 590 D GCG V IR + G+ M++RA+S+ G + E GT+VV+ IP T T Sbjct: 336 DTGCGFDVAHPPIRGHGCGLAGMKERARSIDGTLDITSNER-GTQVVLR-IPTPTVT 390 >UniRef50_D0LYS5 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS5_HALO1 Length = 509 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 5/202 (2%) Query: 390 ERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELL 449 ER ++RELHDSI Q L +++ L Q + PE R+ + L+ + +R L Sbjct: 295 ERQHLSRELHDSIGQLLLVHRLEAEWLANQLEPGPE--RDATEHLCTGLDETLHLVRTLA 352 Query: 450 TTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS 508 R + + G+ ALE C + + G + + + + + + L +IA+EAL+ Sbjct: 353 MDLRPPAIDDLGIESALETLCVDLGRRAGVRCEFENSVALPGLRTEIGVTLYRIAQEALA 412 Query: 509 NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGDC 567 NA +HS + V +AQ+D+ ++L+V D+G G+ PE +G+I MR+RA+ + G Sbjct: 413 NAARHSGCRTIRVVLAQHDSTLELSVSDDGVGIAPERLADDASFGLISMRERAELIGGHV 472 Query: 568 RVRRRESGGTEVVVTFIPEKTF 589 +R GT + V IP F Sbjct: 473 SIRSSPKHGTHIRVA-IPHTQF 493 >UniRef50_UPI0001C312DE integral membrane sensor signal transduction histidine kinase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312DE Length = 468 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 9/231 (3%) Query: 352 RHLSHDQQQLVDTLVEQ--LTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCM 409 R L+ ++L TL E L A L E+ + V+EER +ARE+HD++AQ L+ + Sbjct: 188 RELAETNRRLEATLAENAALQAQLV-----EQARDAGVVEERQRMAREIHDTLAQGLTGI 242 Query: 410 KMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRP-ALEAS 468 + Q PE R L S A+ R + R + E P A+ Sbjct: 243 -VAQIQAAEQAAERPERWRRHLRTAAQLARESLAEARRSVQAVRPEALENARLPEAVAEV 301 Query: 469 CEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDN 528 +S+ G V++ PR +P+ + LL+ A+EAL+N KH++A V VT++ ++ Sbjct: 302 ARRWSSIQGVGVEVTTTGHPRPLPTEVEVTLLRTAQEALANVAKHARAGRVGVTLSYMED 361 Query: 529 QVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 V L V+D+G G A + G++ MR R + L G + GGT + Sbjct: 362 AVTLDVRDDGVGFAVGAAAGDGVGLVAMRQRVEGLGGRLEIESEPGGGTAI 412 >UniRef50_B8HT67 GAF sensor signal transduction histidine kinase n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HT67_CYAP4 Length = 652 Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 79/300 (26%), Positives = 137/300 (45%), Gaps = 10/300 (3%) Query: 292 DDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVG----DRGTT--LKWRLADSHTQYGILL 345 D ++ + D+T D Q+ + VG RG T L L + G L Sbjct: 348 DHNSDYPPYFLIEDITTDPHIGQVSAQIDTDVGAWFSQRGVTRLLNIPLWLNEKTIGALD 407 Query: 346 ATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQS 405 LP R + Q L T +Q+T L++ QQ I++EER IA ++HD++AQ+ Sbjct: 408 IWLPSHRCFNRSQIDLAYTFGQQITLASYLNQMFTEVQQTILLEERNRIASDIHDTLAQA 467 Query: 406 LSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTE-PGLRPA 464 + + +Q+ + P++ ++L I A+ R + TE L Sbjct: 468 FTGISLQLEVAKPLIQQEPQTVEQILQHISQLAKNGLAEARRSVWALYPPGTEYANLAHM 527 Query: 465 LEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVA 524 L S E+ S ++++ P + + ++LL+I +EAL+NALKHSQA V + + Sbjct: 528 LYDSVEQMSRNTPISIEVNLLGQPCPIAPYIGMNLLRIGQEALTNALKHSQAQAVWIELT 587 Query: 525 QNDNQVKLTVQDNGCGV--PENAIRSN-HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 + V L+++DNG G P N N +G++ M +R + + + GT+++V Sbjct: 588 YTPDLVLLSIRDNGRGFTPPTNLDNLNGGFGLVGMYERCDRIGAQISILSQPGQGTQILV 647 >UniRef50_C0Q9H3 Sensory box histidine kinase/response regulator n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H3_DESAH Length = 557 Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 65/265 (24%), Positives = 120/265 (45%), Gaps = 19/265 (7%) Query: 334 LADSHTQYGILLATLPQGRHLSHDQ-------QQLVDTLVEQLTATLALDRHQERQQQLI 386 + S +G+L P+ R + ++ + V+Q TA L ++R Q L Sbjct: 280 IGKSDKAFGVLGVHSPKKRKFKKNDIIFLQSVAHILASAVKQETARTVLKNSEKRLQFLS 339 Query: 387 VM------EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNA 440 EER IA LHD + QSL+ +K+Q+ ++M+ + + ++ ++ Sbjct: 340 SHLLTAQEEERKKIAYMLHDDLGQSLTLLKLQIRAIEMKIEKDGKGAKADCCLAMKNISK 399 Query: 441 SWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHL 499 + +RE+ + L + GL AL + E + F LD + I + Sbjct: 400 TIENVREISHSLTPSILKDLGLSAALHSLFEYFGRYFNVHRHLDMTDMDNQLTQQSKILV 459 Query: 500 LQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNH-----YGMI 554 +I +EA +N ++H++A ++ V V + +N+ + +QDNG G N ++ N G+ Sbjct: 460 YRIFQEAFTNIVRHAKADQIRVCVDRYNNRYRFDIQDNGIGFDLNGLQGNSLKDSGMGLT 519 Query: 555 IMRDRAQSLRGDCRVRRRESGGTEV 579 M +R + L G R+ R GGT + Sbjct: 520 TMNERVRMLGGQLRIENRMCGGTRL 544 >UniRef50_C9NJB7 GAF sensor signal transduction histidine kinase n=7 Tax=Streptomyces RepID=C9NJB7_9ACTO Length = 381 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 12/210 (5%) Query: 377 RHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRN 436 R ER ++L + EER+ +A ELHD+++Q L +++ D P ++ L Q+ Sbjct: 170 RLYERSRELTIAEERSRLAHELHDAVSQKLFSLRLTAQAAAALVDRDPVRAKGELQQVAT 229 Query: 437 ELNASWAQLRELLTTFR-LQLTEPGLRPALEASCE----EYSAKFGFPVKLDYQLPPRLV 491 + +LR + R L E GL L + +SA+ F R + Sbjct: 230 LAGEAVDELRAAVVELRPAALDEDGLVATLRTQVQVLDRAHSARVTF-----TSAGVRAL 284 Query: 492 PSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR--SN 549 P+ Q +L++A+EAL NAL+HS A +V V++A++ L + D+GCG + +R Sbjct: 285 PAAQEEAMLRVAQEALHNALRHSGAGQVDVSLARSTTTAVLRITDDGCGFDPDVVRRAGR 344 Query: 550 HYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 H G++ MR RA + G V GT + Sbjct: 345 HLGLVSMRHRAGGVGGRLVVDSEPGTGTTI 374 >UniRef50_B5YIR1 Sensory box histidine kinase, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR1_THEYD Length = 726 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 62/245 (25%), Positives = 124/245 (50%), Gaps = 13/245 (5%) Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 G + T GR +++ +Q + E+L + R Q I ER IA+E+HD Sbjct: 484 GNFVKTKTIGRDITYRKQ-----IEEELRKSREALRKLSVYLQNIRENERKEIAKEIHDE 538 Query: 402 IAQSLSCMKMQVSCLQ--MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEP 459 + QSL+ +K+ +S ++ ++ + L + E L+ + NA Q++ + R L + Sbjct: 539 LGQSLTALKLSLSWIKKRVEDEFLNKKFDETLTIV----NALIKQVQNISNRLRPSLIDY 594 Query: 460 -GLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASE 518 L A+ +E+ +D + + ++ L +I +EAL+N +H+ A+E Sbjct: 595 LTLEDAIMWQVKEFERNTSIVCNVDIAEHGIKLSKNVSLTLFRIFQEALTNIARHANATE 654 Query: 519 VVVTVAQNDNQVKLTVQDNGCGVPENAIRS-NHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 V + + +++ + L ++DNG G+ + I+S +G++ MR+RA S+ + R GGT Sbjct: 655 VDIKMFRSEASILLIIKDNGIGISDEKIKSPESFGLMAMRERAYSINATLDIHRSYEGGT 714 Query: 578 EVVVT 582 E++++ Sbjct: 715 EIIIS 719 >UniRef50_B9XSJ3 Multi-sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XSJ3_9BACT Length = 795 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 108/205 (52%), Gaps = 7/205 (3%) Query: 384 QLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ--GDALPESSRELLSQIRNE---L 438 Q I EER I RE+HD + QSL+ KM ++ ++ + G+ S ++L+ +I N + Sbjct: 561 QFIREEERKHITREIHDELGQSLTGFKMDLAWMRARLLGEDSKASRQQLIDKIENMARLI 620 Query: 439 NASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAI 497 + + +R L T R L + GL A+E EY + G + + V + ++ Sbjct: 621 DETANVVRRLCTELRPGVLDDLGLTAAIEWQIREYQNRTGIRCSTEIESGDLGVDAERST 680 Query: 498 HLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN-AIRSNHYGMIIM 556 L +I +E ++N +H+QAS V V++ + +++ L V+DNG G+ EN + G++ M Sbjct: 681 ALFRIFQELMTNTARHAQASRVEVSLKRIGSEIVLEVRDNGRGIKENEKAGTKSLGLVGM 740 Query: 557 RDRAQSLRGDCRVRRRESGGTEVVV 581 R+RA L G+ + + GT V V Sbjct: 741 RERALVLGGELEIAGKPGRGTMVRV 765 >UniRef50_C5AKB3 Sensory box histidine kinase n=1 Tax=Burkholderia glumae BGR1 RepID=C5AKB3_BURGB Length = 687 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 11/206 (5%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRE--LLSQIRNEL-------N 439 EE+ +ARELHD + Q L+ ++M+ S D + + +R+ L+ N+L + Sbjct: 470 EEKTRLARELHDDLGQQLAVLEMEASAAAQALDRVLDGARDPGLIETAVNKLHGMRRLTD 529 Query: 440 ASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIH 498 ++ A +R + R L L + G+ PA+E +++ + G V L R + A Sbjct: 530 SAVASVRRVAANLRPLMLDDLGVVPAIEWLASDFAKRHGIEVVRHVALGERTLTGAGATA 589 Query: 499 LLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNH-YGMIIMR 557 L +I +EAL N KH+QAS V + + + L V DNG GVP R+ +G+I +R Sbjct: 590 LFRIVQEALVNVAKHAQASRVDICLKAVGDACVLRVADNGRGVPHERPRAGKAFGLIGVR 649 Query: 558 DRAQSLRGDCRVRRRESGGTEVVVTF 583 +RA +L G + G + VT Sbjct: 650 ERAHALGGRLTIAGPPGQGFSITVTL 675 >UniRef50_C1B303 Putative two-component histidine kinase n=2 Tax=Nocardiaceae RepID=C1B303_RHOOB Length = 393 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 3/198 (1%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLREL 448 EER IARELHD +A SLS + +Q S D+ PE S+E LS I+ + + L Sbjct: 186 EERLAIARELHDVLAHSLSLINVQASVALELWDSRPEQSQEALSAIKVASRDAIGDVHAL 245 Query: 449 LTTFRLQLTEPGLRPALEASCE---EYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 L + R + P A + E + G V + PR +P+ + +I +E Sbjct: 246 LASLRGNDSAPTAPTAGIGDLDGVVERARTAGLAVTTVVEGTPRSLPAVVDVAAARIVQE 305 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRG 565 +L+N +HS S VVTV V++ + D+G G G+ MR+RA++L G Sbjct: 306 SLTNVARHSGGSPAVVTVTYTPTSVRIRIDDDGRGPDSAPTVGGGNGIPGMRERARALGG 365 Query: 566 DCRVRRRESGGTEVVVTF 583 + GG V T Sbjct: 366 ELTAGSGPGGGFRVQATL 383 >UniRef50_A1K9T2 Putative two-component sensor histidine kinase n=1 Tax=Azoarcus sp. BH72 RepID=A1K9T2_AZOSB Length = 448 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 9/219 (4%) Query: 366 VEQLTATLALDRHQERQQQLIVME----ERATIARELHDSIAQSLSCMKMQVSCLQMQGD 421 +E+L +LA R ER+ +ME ER +ARELHD QSL+ + + ++ Sbjct: 214 IERLADSLAQSRAAERRLGRCLMEVQETERRELARELHDEFGQSLTAIGAAAAFVERHAA 273 Query: 422 ALPESSR-ELLSQIRNELNASWAQLRELLTTFRLQLTEP-GLRPALEASCEEYSAKFGFP 479 A + E IR E AQ+R LL R E G+ AL + + Sbjct: 274 AAEPAQLAECARDIRGESGRMSAQVRGLLRQLRPHGLEGLGMLDALRELIAGWHQRL-PG 332 Query: 480 VKLDYQLPPRL--VPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDN 537 V L+ LP RL + + + L + +EAL+N L+H+ AS V + +A + N + L V D+ Sbjct: 333 VALEVALPARLPALSAEAGLALYRTVQEALTNVLRHAAASRVDIALAADGNGLLLRVADD 392 Query: 538 GCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGG 576 GCG +R G++ MR+RA G+ R+ R GG Sbjct: 393 GCGRAAEVMRRAGGGLLGMRERAAMAGGEFRLEDRPGGG 431 >UniRef50_A1ATT5 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATT5_PELPD Length = 381 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 73/258 (28%), Positives = 129/258 (50%), Gaps = 24/258 (9%) Query: 347 TLPQG-RHLSHDQQQL---VDTLVEQLTATL-----ALDRHQERQQQL----------IV 387 T P G RH +Q + ++ +VE+ T L AL + R+QQ+ + Sbjct: 120 TEPTGFRHERAEQDNVRRQLEIVVEERTGQLNETMEALRQETARRQQIETNVTTMRENLE 179 Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRE 447 +ERA +AR++HD I Q+L +K+Q+ Q + + L++I EL ++ +LRE Sbjct: 180 NQERARVARDIHDGIGQTLQAIKLQLKIRQARCREGEPCGGQALNEIIGELTSAATELRE 239 Query: 448 LLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREA 506 ++ R L L + L A+ + CE + + G V+ + Q R + S + + +I +EA Sbjct: 240 IILALRPLFLEDTDLDLAVRSLCERSAKRTGLDVRAECQGSFRGLGSSFKLSIFRICQEA 299 Query: 507 LSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG---VPENAIRSNHYGMIIMRDRAQSL 563 L+N +KHS ++ + + + +++T++D+G G P I G+ IMR+RA+ L Sbjct: 300 LTNIVKHSGCRSALIRLEREPHTMRITIRDDGRGGVSCP-TIISQEGSGLAIMRERAELL 358 Query: 564 RGDCRVRRRESGGTEVVV 581 G V GT + V Sbjct: 359 GGALSVISPPGMGTAITV 376 >UniRef50_A1ASJ6 Multi-sensor signal transduction histidine kinase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASJ6_PELPD Length = 1168 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 110/208 (52%), Gaps = 16/208 (7%) Query: 391 RATIARELHDSIAQSLSCMKMQVSCLQMQGDALP-ESSRELLSQIRNE---LNASWAQLR 446 R +A ELHD I + L+ + + +S + G +LP E++ L +++ + L + +R Sbjct: 965 RKVVAAELHDEIGRDLTVLGINLSLI---GTSLPLETAAPLRTRVEDSGRMLESVSRTVR 1021 Query: 447 ELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKL--DYQLPPRLVPSHQAIHLLQIA 503 +++T R L + GL AL E +S + G V++ D +LP V + + I L +IA Sbjct: 1022 NIMSTLRPPVLDDYGLAAALRWYGELFSRRTGIDVRVQVDDELPR--VAAEREIALFRIA 1079 Query: 504 REALSNALKHSQASEVVVTVAQNDNQVKLTVQDNG----CGVPENAIRSNHYGMIIMRDR 559 +EAL+N KH+ A V + +A +D + +V D+G CG+ S+ +GM IMR+R Sbjct: 1080 QEALTNVAKHAAARNVNLWLAHDDGLLLFSVADDGRGLACGLEPRNPESSGWGMTIMRER 1139 Query: 560 AQSLRGDCRVRRRESGGTEVVVTFIPEK 587 A+ G RV +GG V V E+ Sbjct: 1140 AELFGGVFRVHALPAGGVGVTVEMPKEE 1167 >UniRef50_A3UAN0 Two-component sensor histidine kinase n=1 Tax=Croceibacter atlanticus HTCC2559 RepID=A3UAN0_9FLAO Length = 606 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 121/240 (50%), Gaps = 24/240 (10%) Query: 357 DQQQLVDTLVEQ-LTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSC 415 ++Q+L L EQ LT A+ QE+ ER +A +LHDS+ +L+ ++Q S Sbjct: 380 EKQKLQTFLKEQELTTIDAIIEGQEK--------ERQKLAGDLHDSVGATLATARLQFSH 431 Query: 416 LQMQGDALPE------SSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASC 469 L+ ++L ++ ELLSQ +E+ + + L+ L + L PA+E Sbjct: 432 LKKHKNSLDNLDDIFSNTEELLSQAYHEI-RNMSHLKNSGV-----LAKKSLVPAIENLA 485 Query: 470 EEYSAKFGFPVKLD-YQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDN 528 + S V+++ Y L RL ++ I + +I +E ++N +KH+ ASE +T+ Q+D+ Sbjct: 486 KNASVSTSLQVEVNHYGLEDRL-DNNLEISIFRIIQELVTNIIKHANASEASITLTQHDD 544 Query: 529 QVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 + + V+DNG G +AI G+ + R L GD + GT +++ IP KT Sbjct: 545 DLNIIVEDNGKGFNLSAIDKQGLGLSSIEKRVNFLHGDINIDSTVGKGTTIIID-IPLKT 603 >UniRef50_A1WDG5 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Acidovorax sp. JS42 RepID=A1WDG5_ACISJ Length = 322 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 17/209 (8%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQ--MQGDALPESSRELLSQIRNELNASWAQLR 446 EER T+AR LHD + L + + L+ + G+ + ELL LN ++A++R Sbjct: 112 EERRTLARRLHDEVNPQLLLTRNVLKQLEPLVAGNG---RAAELLGNASGMLNDAYAEMR 168 Query: 447 ELLTTFRLQLTEP-GLRPALEASCEEYSAKFGFP-VKLDYQLPPR-LVPSHQAIHLLQIA 503 +++ R+++ + G ALE+ Y+ P + L++ LP R +P AI +I Sbjct: 169 DIIKNTRIEVIDSIGFTAALESLVAHYTNISEKPAITLEHDLPKRPAMPEASAISAYKII 228 Query: 504 REALSNALKHSQASEVVVTVAQND--NQVKLTVQDNGCGVPENAIRSNH--YGMIIMRDR 559 REA+ NA+KHS+A++V V++ N + K+ + D+G G+ A H G+I MR+R Sbjct: 229 REAIFNAIKHSKAAQVRVSIHHNKALDTYKVEITDDGVGMKATARNGEHAGIGLIDMRER 288 Query: 560 AQSLRGDCRVRRRESG-----GTEVVVTF 583 + L G +++ + GT++ +F Sbjct: 289 VRVLGGALKIQAADPANQKRPGTKLSFSF 317 >UniRef50_C6J7D3 ATP-binding region ATPase domain-containing protein n=2 Tax=Bacillales RepID=C6J7D3_9BACL Length = 356 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/225 (28%), Positives = 115/225 (51%), Gaps = 9/225 (4%) Query: 365 LVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP 424 L++QL +++ Q ++ V+EER +AR+LHD+++Q L + M S L + Sbjct: 119 LLQQLGEQEVVEKEQAAEKA--VLEERRRLARDLHDTVSQQLFAIHMAASSLPKVLENNA 176 Query: 425 ESSRELLSQIRNELNASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFP-VK- 481 + +L+Q+ N + Q+R L+ R ++L L AL+ +Y + G +K Sbjct: 177 TQAETVLNQLIQMSNTAQKQMRALIAQLRPMELVGKSLAEALDQWFPDYCRQNGLKGIKD 236 Query: 482 LDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV 541 +D Q HQ L I +EA++N +KH+ AS V +++ + QV L++ D+G G Sbjct: 237 MDIQGDMSEAKEHQ---LFLIIQEAMANIVKHAGASMVSLSLREGPRQVVLSISDDGQGF 293 Query: 542 PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 + YG+ M++RA+ L G+ + + GT + V IP+ Sbjct: 294 SSTYQKQGSYGLTTMKERAEKLGGNAEIISKPGAGTTIRV-HIPK 337 >UniRef50_B7IV98 Sensor histidine kinase n=76 Tax=Bacillales RepID=B7IV98_BACC2 Length = 372 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/243 (27%), Positives = 123/243 (50%), Gaps = 9/243 (3%) Query: 340 QYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELH 399 ++G+L P H S ++ L++++ Q+ T+ + E++++ +V+ ER +AR+LH Sbjct: 134 KFGLLNVAAPHKTHFSEEELALLESIAFQIGTTIQRIQLVEKERKYVVVAERNRLARDLH 193 Query: 400 DSIAQSL-SCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTE 458 DS+ Q L S M L M D +E+LS I EL S L+E+ T QL Sbjct: 194 DSVKQLLFSIMLTAKGTLNMTQD---RELQEMLSYI-GEL--SQEALQEM-TLLIWQLRP 246 Query: 459 PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASE 518 GL L + + Y G V++ + + + L +I++EAL N KH+ + Sbjct: 247 EGLEKGLAEAIQNYGKLLGVQVEVRIDGMVSIGDEIEEV-LWRISQEALHNCKKHASCEK 305 Query: 519 VVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTE 578 V V + +NQ+ ++DNG G ++ +R + G+ M++R Q ++G ++ GT+ Sbjct: 306 VHVLLKIENNQLFFYIEDNGIGFIQDQVRESALGLKSMKERIQLMKGSFQIITELRKGTK 365 Query: 579 VVV 581 + + Sbjct: 366 IEI 368 >UniRef50_C1I713 Two-component sensor histidine kinase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I713_9CLOT Length = 383 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/231 (25%), Positives = 119/231 (51%), Gaps = 9/231 (3%) Query: 341 YGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQER----QQQLIVMEERATIAR 396 + ILL + + + + Q+L D L + +H E ++L V++ER I+R Sbjct: 132 FIILLNYISRLHNTKREAQRLYDKLRVSEENLIETKKHLEECLTSIEELTVLKERNRISR 191 Query: 397 ELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQL 456 E+HDS+ SLS +Q+S ++ D +++ S +R+ +N S+ ++ ++ + Sbjct: 192 EIHDSVGHSLSTAMIQLSAMESIADKEGSMLKDMSSNLRDFINESFQDVKRAVSELKSDD 251 Query: 457 TEP--GLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHS 514 + GL ++ C+ + G V + + + Q+ HL +I +E LSNAL+H Sbjct: 252 YDNYRGL-IRIQELCKNFEKMSGVEVNIILSKGDWTLSTKQSTHLYRITQEVLSNALRHG 310 Query: 515 QASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRG 565 +AS+V V + +N ++ +D+G G + I+ + +G+ +R+R++ + G Sbjct: 311 KASKVKVIMNFTENDFVISFKDDGIGT--DIIKESGFGLKNIRERSEEIDG 359 >UniRef50_Q3M1D8 Serine/threonine protein kinase and signal transduction histidine kinase with GAF and PAS/PAC sensor n=9 Tax=Bacteria RepID=Q3M1D8_ANAVT Length = 2361 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/236 (29%), Positives = 122/236 (51%), Gaps = 15/236 (6%) Query: 354 LSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQV 413 +SHDQ V LV +TA Q++ ++ ++EER +ARE+HD++AQ+ + + QV Sbjct: 2137 ISHDQ---VIWLVRDITA-------QKQAEEASILEERNRMAREIHDTLAQAFTGILAQV 2186 Query: 414 SCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPG-LRPALEASCEEY 472 + E+++ L I+ + R + R QL E G L+ AL + Sbjct: 2187 GAAKQVLTDDVEAAQAHLDLIKELARTGLTEARRSVIALRPQLLEEGSLQSALHRLVAQI 2246 Query: 473 SAKFGFPVKLDYQLPPRL--VPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQV 530 A L Y++ + +P+ +LL+I +EAL+NA++++ A E+ V + + +Q Sbjct: 2247 RAA-ATDTTLYYEIEGAVYSLPTEVENNLLRIGQEALTNAIRYANADEIRVELVYDRDQF 2305 Query: 531 KLTVQDNGCGVPENAIR-SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 L V+DNG G +I S +G++ M +RA+ + +R + GTE++VT P Sbjct: 2306 CLRVRDNGQGFGVGSISASEGFGLLGMSERAERIGAQLTIRSQPGQGTEIIVTVNP 2361 >UniRef50_A0NNP2 Signal transduction histidine kinase n=2 Tax=Labrenzia RepID=A0NNP2_9RHOB Length = 453 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 113/225 (50%), Gaps = 12/225 (5%) Query: 358 QQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ 417 +Q+ D+ +++LT + + QER++ ++ ELHDSI+Q L ++ V + Sbjct: 228 EQRFADSKLKELTNRIFQVQEQERKR----------VSTELHDSISQLLVSVRYGVEMIH 277 Query: 418 MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKF 476 + + PE + ++ L+ + A++R + R L + GL AL + +E+ + Sbjct: 278 SEANREPELQAQAAKCLKT-LDGTIAEVRRISRDLRPSVLDDMGLAAALGSLGKEFQNQS 336 Query: 477 GFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQD 536 G V + + + L ++ +E ++N +HS ASEV +++ Q+ L+V+D Sbjct: 337 GITVNVQAEQCHSRLSEGAKTALYRVVQECMTNVARHSHASEVAISLKVGVQQLVLSVED 396 Query: 537 NGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 NG G+P +S G MR+R ++ G + RR SGGT + V Sbjct: 397 NGVGLPRPLPKSGGLGFRNMRERIETYGGRLTLSRRASGGTRIKV 441 >UniRef50_A1SFF3 Histidine kinase, dimerisation and phosphoacceptor region n=1 Tax=Nocardioides sp. JS614 RepID=A1SFF3_NOCSJ Length = 392 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 100/201 (49%), Gaps = 8/201 (3%) Query: 384 QLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWA 443 ++ V EER IARELHD +A ++S M +QV ++ + +RE L + A+ A Sbjct: 184 RVAVAEERGRIARELHDVVAHAVSVMVLQVGAVRHRMSDSDAENREALENVERAGRAALA 243 Query: 444 QLRELLTTFRLQLTEPGLRPA-----LEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIH 498 ++R LL R +P L P L++ + A G PV+L P +P + Sbjct: 244 EMRRLLGAMRRDGEQPELVPHPGLADLDSLLADVRAA-GLPVRLQVHGEPVELPPGLDLS 302 Query: 499 LLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRD 558 +I +EA++N LKH++A V V + +++ V+D+G G A +G++ +R+ Sbjct: 303 AYRIVQEAITNTLKHARAHRADVDVYYEPHDLRVEVRDDGRGSTSGA--GLGHGLVGLRE 360 Query: 559 RAQSLRGDCRVRRRESGGTEV 579 R + G+ R +GG V Sbjct: 361 RVKIYGGEMTAGRGPAGGFAV 381 >UniRef50_Q2LRG0 Signal transduction histidine kinase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LRG0_SYNAS Length = 519 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 118/239 (49%), Gaps = 20/239 (8%) Query: 363 DTLVEQLTATLALDRHQERQQQLIVM------EERATIARELHDSIAQSLSCMKMQVSCL 416 + + E+ A L+ +E+ + L + EER IARE+HD + QSL+ KM +S L Sbjct: 284 EDITERKKAEKELEESREKMRNLSIHLQSVREEERTRIAREIHDELGQSLTAFKMDLSWL 343 Query: 417 --QMQGDALPESSRELLSQIRNELNAS----WAQLRELLTTFRLQLTEPGLRPALEASCE 470 +M + L + +S + + S A LR L L + GL A+E + Sbjct: 344 GKRMTSEKLLHDKIKAMSGLVDRTIESVHRISADLRPGL------LDDLGLVAAMEWQAK 397 Query: 471 EYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQV 530 E+SA+ G + D + + A + +I +E L+N +HS A++V V + ++V Sbjct: 398 EFSARSGIACEADLEAEDVPLDKEPATAVFRIFQETLTNVARHSNATKVFVRLETKGDKV 457 Query: 531 KLTVQDNGCGVPENAIRS-NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 L V DNG G+ + I +G++ MR+RA GD +V S GT V V+ IP K+ Sbjct: 458 ILEVTDNGRGITQKQINDPKSFGIMGMRERALLWGGDVQVIGSRSRGTTVKVS-IPLKS 515 >UniRef50_Q0KDJ4 Signal transduction histidine kinase containing PAS/PAC sensor domain n=3 Tax=Burkholderiales RepID=Q0KDJ4_RALEH Length = 355 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 105/195 (53%), Gaps = 8/195 (4%) Query: 390 ERATIARELHDSIAQSLSCMKMQVSCLQMQ-GDALPESSRELLSQIRNELNASWAQLREL 448 ER I+RELHD + QSL+ +++ +S ++ Q G ++ R+ L ++ +++ ++ + Sbjct: 148 ERTRISRELHDELGQSLTALRLGLSFIEAQQGPDAGDACRKHLQMLKQIADSTVDAVQRI 207 Query: 449 LTTFRLQL-TEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 R L E GL A+E E +S + G +L Q P + + + + +IA+EAL Sbjct: 208 AADLRPPLLDELGLTAAIEWLAESFSERGGIACELALQ-PVGELSAELSTAVFRIAQEAL 266 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNH---YGMIIMRDRAQSLR 564 +NA +H +A V V ++ ++L V DNG G+ +A R+ H G++ MR+RA L Sbjct: 267 TNACRHGRADRVRVELSAAGGTLRLVVADNGRGI--DASRAGHRRSLGLLGMRERALMLG 324 Query: 565 GDCRVRRRESGGTEV 579 G V + GGT V Sbjct: 325 GKLAVTSEKGGGTRV 339 >UniRef50_Q1IJ87 Histidine kinase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ87_ACIBL Length = 249 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 13/210 (6%) Query: 383 QQLIVM--EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNA 440 Q+LI EER+ +ARELHD +Q L+ + +Q+ L M LP+ L + + + ++ Sbjct: 43 QKLITAHEEERSYLARELHDDTSQRLALLAIQLEALAMN---LPQKKATLRAALMD-MHK 98 Query: 441 SWAQLRELLTTFRLQLTEP-----GLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQ 495 S L + QL G A+ C++ A+ G V +P Sbjct: 99 SVTDLAADIHALSRQLHPSVLDRLGAVAAIRGLCDQVRAQRGISVTFSGADISDALPRES 158 Query: 496 AIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMII 555 A+ L +IA EA++NA+KH A+E+VV ++Q N V LT++DNG G A +S G + Sbjct: 159 ALCLYRIAEEAITNAIKHGSATELVVELSQRSNAVVLTIRDNGSGFDLRA-QSEGLGFLS 217 Query: 556 MRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 MR+R + G VR GT + + IP Sbjct: 218 MRERLRLASGSLLVRSASGEGTAIEAS-IP 246 >UniRef50_A9WAP8 ATP-binding region ATPase domain protein n=3 Tax=Chloroflexus RepID=A9WAP8_CHLAA Length = 491 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 26/213 (12%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESS------RELLSQIRNELNASW 442 EER IARELHDS +Q+L+ + + + L + + PE + R ++ QI N+L+A Sbjct: 280 EERKRIARELHDSTSQALTSLLVGLRSLADRHRS-PEIAQQVDDLRSIVGQILNDLHALA 338 Query: 443 AQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKL------DYQLPPRLVPSHQA 496 QLR + L + GL AL+ E A+ G + L D++L P + + Sbjct: 339 RQLRPSV------LDDLGLAAALQRYVAECRARSGLIIDLALPGLDDFRLDPVVETA--- 389 Query: 497 IHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN-HYGMII 555 L +I +E L+N ++H+ AS V + + ++V+ ++D+GCG NA+ + H G+ Sbjct: 390 --LYRIVQEGLTNIIRHAHASTASVVIERRADRVRAIIEDDGCGFDPNALHGDGHLGLNG 447 Query: 556 MRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 +R+RA L G + GT + V IP T Sbjct: 448 IRERAALLNGQLIIESSPGSGTTLYVE-IPLTT 479 >UniRef50_Q0B944 Multi-sensor signal transduction histidine kinase n=29 Tax=Burkholderiaceae RepID=Q0B944_BURCM Length = 707 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 12/205 (5%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQ----GDALPESSRELLSQI---RNELNAS 441 EE+ IARELHD + Q L+ +KM +S ++ Q G A P ++LS + R ++A+ Sbjct: 493 EEKTRIARELHDDLGQQLTALKMDLSVIEQQLRAPGRAQPND--DVLSHLQGMRRLIDAT 550 Query: 442 WAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLL 500 A +R + R + L + GL PA+E +++ ++G V+ + S A L Sbjct: 551 VASVRRIAADLRPVMLDDLGLVPAIEWLANDFTNRYGIDVERHIETGGLTFTSAGATTLF 610 Query: 501 QIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPE--NAIRSNHYGMIIMRD 558 +I +EAL+N +H+ A+ V + + + L V DNG G +A +G+I +R+ Sbjct: 611 RIVQEALTNVARHADATRVALRLDIEEGFCVLRVADNGRGAAPGGSAHEDKSFGLIGIRE 670 Query: 559 RAQSLRGDCRVRRRESGGTEVVVTF 583 RA L G+ + + G + V F Sbjct: 671 RAHMLGGNVTIDTALARGFSITVAF 695 >UniRef50_D0MHQ4 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHQ4_RHOM4 Length = 661 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 7/204 (3%) Query: 380 ERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELN 439 ER+ + E++ I R+LHD + Q L+ ++M L + A EL ++ Sbjct: 448 ERRMVQTLEEQQQAIGRDLHDGVGQLLTSVRMLSENLATRLQAEQHELAELAQKVVRFAQ 507 Query: 440 ASWAQLRELLTTFR----LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQ 495 + +R T +R QL L ALE +A G + + + Sbjct: 508 EASEGVR---TIYRGLTPAQLYTEDLTLALEELAYNTNALPGIRCRFETDGQVSIDNQEV 564 Query: 496 AIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMII 555 +HL +IA+EA++NALKH+QASE+V+T+ + D+ ++L V DNGCG+ + R++ G+ Sbjct: 565 KLHLYRIAQEAINNALKHAQASEIVLTLRRRDDVIELCVADNGCGLDPSRARADSLGLKT 624 Query: 556 MRDRAQSLRGDCRVRRRESGGTEV 579 M RA+++ G R+ R GT + Sbjct: 625 MYYRARTIGGTLRIHSRPGEGTTI 648 >UniRef50_A4VTF8 Signal transduction histidine kinase n=6 Tax=Streptococcus suis RepID=A4VTF8_STRSY Length = 338 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 8/198 (4%) Query: 386 IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP-ESSRELLSQIRNELNASWAQ 444 IV ER IAR+LHD+++Q L M +S L LP E+ +E L +++ + ++ Sbjct: 125 IVEGERKRIARDLHDTVSQELFATSMILSGLSSNLSTLPQETLQEQLMLVKDMIESAQRD 184 Query: 445 LRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLP--PRLVPSHQAIHLLQ 501 LR LL R +L L E E S K V +++ P+L+ H L + Sbjct: 185 LRILLLHLRPSELESKTLVEGFELILREVSDKSNIIVHFQHEVEELPKLIEEH----LFR 240 Query: 502 IAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQ 561 IA+E +SN L+H++A + V + Q + +++L + D+G G + A YG+ +R+R + Sbjct: 241 IAQEIISNTLRHAKAKHLDVYLLQKETELQLKMTDDGIGFQQGADDELSYGLQNIRERVE 300 Query: 562 SLRGDCRVRRRESGGTEV 579 + G ++R + G + Sbjct: 301 DMAGTIKIRTAPNKGVAI 318 >UniRef50_Q3SII8 Possible Sensor with PAS/PAC domain n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SII8_THIDA Length = 493 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 113/215 (52%), Gaps = 20/215 (9%) Query: 374 ALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQ 433 AL H E ++ +ER +ARE+HD + +L+ +K+ +SCL Q P S L + Sbjct: 276 ALAAHVESAKE----QERLYLAREVHDDLGGNLTTIKIGLSCLARQ---FPSESTPLTER 328 Query: 434 IR---NELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQL--PP 488 +R N ++ ++ + + R + G+ PA+++ + +FG ++ Y+ P Sbjct: 329 VRYLDNLVDQTFEAAHRIASNLRPAALDFGIVPAIDSQLQ----RFGRNTEIAYEFRAPT 384 Query: 489 RLVP--SHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP--EN 544 +P S AI + +I +E L+N KH++A+ V + + ++ + + LT+ DNG G+P N Sbjct: 385 DEIPLDSAAAIAVFRIVQEGLTNVAKHARATRVRLELVRDRDTLHLTLTDNGRGLPAAPN 444 Query: 545 AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 + +G++ M +RA +L G VR GTE+ Sbjct: 445 GMARPVFGILGMSERAAALGGQLVVRPAPDQGTEL 479 >UniRef50_Q1D524 Sensor histidine kinase n=2 Tax=Cystobacterineae RepID=Q1D524_MYXXD Length = 427 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 11/203 (5%) Query: 383 QQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ--MQGDALPESSRELLSQIRNELNA 440 ++L V+EER +ARE+HD + SLS M +Q + + + L E REL +L A Sbjct: 227 KELAVVEERNRMAREIHDGLGASLSSMIIQSEYILNLAREEGLREEIREL------KLTA 280 Query: 441 SWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQ-LPPRLVPSHQAIHL 499 + EL + R+ + L LE + + + G ++ + L +L P Q + L Sbjct: 281 E-ESIEELRRSLRMMREDFELAQGLEDYAKTFRERTGLDIRFERTGLQRKLDPDVQ-LAL 338 Query: 500 LQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDR 559 +I +E+LSNA+KH++A V V + ++++V L V+D+G G + HYG++ MR+R Sbjct: 339 FRILQESLSNAVKHAEAKGVQVRLDFSEDRVNLVVRDDGKGFDPSRTPRGHYGLLNMRER 398 Query: 560 AQSLRGDCRVRRRESGGTEVVVT 582 A L G V G +V + Sbjct: 399 AMKLGGQLIVDSSPGAGAQVAFS 421 >UniRef50_UPI000174440D histidine kinase n=2 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174440D Length = 692 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 109/215 (50%), Gaps = 16/215 (7%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQM-----QGDALPESSRELLSQIRNELNASWA 443 +ER IARE HD++ Q L+ + +++ +Q +G+ L +SR L+SQ++ E Sbjct: 475 DERQRIAREFHDTLEQGLTGLLLRLEAVQAHGVNERGEHLLRASRGLVSQMQVET----- 529 Query: 444 QLRELLTTFRLQLTEPG-LRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQI 502 R L++ R+ E L AL+A +E+ G +KL+ P +PS HL I Sbjct: 530 --RSLVSELRVPSRENADLVAALQAIVDEHPLGCGPVLKLEVSGPMPPLPSRTVHHLRMI 587 Query: 503 AREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS---NHYGMIIMRDR 559 ARE ++NALKH++A + +++ +++++T+ D+G G A+ H+G I + +R Sbjct: 588 AREGVTNALKHARAGCIRLSLGVEGSRLRMTIADDGQGFDAEALHGGQRGHFGCIGIEER 647 Query: 560 AQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQG 594 G R GT + + + E++ G Sbjct: 648 CAKFGGIALWRSAPGQGTTLEIELMLERSAPAAHG 682 >UniRef50_C7Q6M5 GAF sensor signal transduction histidine kinase n=6 Tax=Actinomycetales RepID=C7Q6M5_CATAD Length = 393 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 15/240 (6%) Query: 354 LSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQV 413 + D ++L+ L L R ER+++L + ER +ARELHD++AQ L +++ Sbjct: 145 FTKDDEELLGVLAGHAAIALRHARLYERERELAITRERNRLARELHDAVAQKLFALRLTS 204 Query: 414 SCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFR-LQLTEPGLRPALEASCE-- 470 D P +R L Q+ + +LR ++ R +L E GL L E Sbjct: 205 QAAAEVLDTDPARARAELEQVATLAKEAAEELRSVVVELRPAELEEDGLAVTLRKHVEVL 264 Query: 471 -EYSAKFGFP-VKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTV----- 523 + G P V + + L P+ + + LL++A+EAL NAL+H+ A+ + V + Sbjct: 265 DRVNQTAGGPRVTFEGEDVKALSPAAEEV-LLRVAQEALHNALRHADAATISVRLREHCP 323 Query: 524 --AQNDNQVKLTVQDNGCGVPENAIR--SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 A++ L V D+G G +R G++ MRDRA+S+RG V GT + Sbjct: 324 AGAKSCGGALLEVVDDGAGFDPATVRRAGRSLGLVSMRDRAKSVRGRLDVASAPGAGTTI 383 >UniRef50_A9B7C8 GAF sensor signal transduction histidine kinase n=3 Tax=Chloroflexi (class) RepID=A9B7C8_HERA2 Length = 548 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 20/218 (9%) Query: 379 QERQQQLIVMEE--RATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRN 436 +E + +LI EE R I R+LHD QS++ + M + ++ A+PE + L+ + Sbjct: 323 KEERDRLIRKEEEVRHQINRDLHDGPTQSVAAIAMNIEFIKKLMQAMPERVEDELNSLAA 382 Query: 437 ELNASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPP-----RL 490 + ++ +LR LL R L L GL A+ EY+ KF P + + P RL Sbjct: 383 LVKKTYQELRTLLFELRPLGLETQGLV----ATLHEYANKFRDPSGMQVRFTPGNFIGRL 438 Query: 491 VPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLT--VQDNGCGVPENAIRS 548 P A + I +EA++NA KH++AS V + + Q+ + LT V+D+G G +I + Sbjct: 439 APQTAAATFM-IIQEAVNNARKHAKASMVWIELFQDSERQMLTAVVRDSGIGFDLKSITT 497 Query: 549 NH-----YGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 ++ +G++ M +RA G C +R GT++++ Sbjct: 498 SYEERGSFGLLNMGERATLAGGACEIRSSAGEGTQIII 535 >UniRef50_A5V147 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Roseiflexus sp. RS-1 RepID=A5V147_ROSS1 Length = 425 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 2/193 (1%) Query: 375 LDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQI 434 L+R +++ +L + ER IAR++HD + +L+ + +Q+ Q P+ + + + Sbjct: 203 LERSRDQAIELAKLRERERIARDMHDYLGHTLAALSVQLEATQRLYRVDPQRADAQIDAM 262 Query: 435 RNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPS 493 + ++ S A LR + R L + L AL C S + G V +P Sbjct: 263 KTQVRESMAALRRTIAGLRTPGLGDRSLHQALLEHCVAVSQRSGMNVNCHIDPAIDCIPP 322 Query: 494 HQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI-RSNHYG 552 A L +A+EAL+N KH+ A+ V + +V+L ++DNG G+P +A R HYG Sbjct: 323 VLAETLWMVAQEALTNVEKHAHATSTEVAATVSPQEVRLCIRDNGVGLPADAFERPGHYG 382 Query: 553 MIIMRDRAQSLRG 565 + +R+R + + G Sbjct: 383 LRGIRERVEGVGG 395 >UniRef50_B1Y7S0 Histidine kinase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y7S0_LEPCP Length = 490 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 104/200 (52%), Gaps = 2/200 (1%) Query: 372 TLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELL 431 TLA R RQ + ER +ARELHD + QS++ ++ + L + + RE+ Sbjct: 260 TLAESREIARQIEHHTEHERREMARELHDELGQSVTAIRSVANSLVHRLGERDAAGREMA 319 Query: 432 SQIRNELNASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFP-VKLDYQLPPR 489 + I +E + + L+ L L GL AL + G P + L+ Q P Sbjct: 320 ALISSEAARLYEVMHGLIPRLTPLALDSLGLADALADLVGGARQRPGSPQIDLNTQALPA 379 Query: 490 LVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN 549 + + A+ ++ +EAL+NAL+HS A+ + + + +D +++TV+D+G G+P + R Sbjct: 380 GLDAELALAAYRVVQEALNNALRHSGAARIDIAASADDTGLQITVEDDGAGLPPDWQRPG 439 Query: 550 HYGMIIMRDRAQSLRGDCRV 569 HYG+ +R+R + L G+ ++ Sbjct: 440 HYGLRGLRERLRGLGGELQI 459 >UniRef50_C6CVS1 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVS1_PAESJ Length = 338 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 2/194 (1%) Query: 387 VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLR 446 V+EER +ARELHD+++Q L + M + + + E ++ + I + + +++R Sbjct: 133 VIEERQRLARELHDAVSQQLFAISMTATAVSRTIERDWERAKRQVQLIEEMASVAQSEMR 192 Query: 447 ELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 LL R + L L AL A +E K + LD + P + HL +IA+E Sbjct: 193 ALLLHLRPVHLDGKNLAAALTALVDELKQKVPMTIDLDVDDSITMKPETED-HLFRIAQE 251 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRG 565 ALSN L+HS+A + + + + +V++ ++D G G A + YG++ M +R L G Sbjct: 252 ALSNTLRHSKAESMEIKLHRKGPEVRMLLKDTGIGFDLEAKKQTSYGLLTMEERVNELGG 311 Query: 566 DCRVRRRESGGTEV 579 + + GT + Sbjct: 312 YLHMISKPGEGTSI 325 >UniRef50_P54663 Sensor protein degS n=33 Tax=Bacillales RepID=DEGS_BREBE Length = 386 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 97/191 (50%), Gaps = 4/191 (2%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQ--MQGDALPESSRELLSQIRNELNASWAQLR 446 EER ++RE+HD AQ ++ + ++ ++ + E+ +E+ +R + +S A++R Sbjct: 184 EERRKLSREIHDGPAQMMANVLLRSELVERIYHDKGIDEALKEI-RDLRKMVKSSLAEVR 242 Query: 447 ELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 ++ R + L + GL P L+ + + G V + P H I L ++ +E Sbjct: 243 RIIYDLRRMALDDLGLIPTLKKYVKTFEEHTGIFVDFKHIGKGERFPEHVEIALFRLVQE 302 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRG 565 AL N KH++AS V V + + + + ++DNG G + + +G++ M++R L+G Sbjct: 303 ALQNTRKHAKASHVHVKIEEQKTKFTVVIKDNGKGFDQTEKKEGSFGLVGMKERVNMLKG 362 Query: 566 DCRVRRRESGG 576 +R + + G Sbjct: 363 QLVIRTKPNDG 373 >UniRef50_B2TAX2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2TAX2_BURPP Length = 748 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 9/201 (4%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQM---QGD-ALPESSRELLSQIRNELNASWAQ 444 EER IARE+HD + Q L+ +++ VS +++ Q D AL R+LL+ + + Sbjct: 548 EERKRIAREMHDELGQQLTALRLGVSAMRIEFAQDDPALAGRFRDLLALADDTMQV---- 603 Query: 445 LRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAR 504 +R ++ + R + G+ ALE E+S L ++ +AI L +I + Sbjct: 604 VRNVVASLRPAAIDAGIVAALEWLAAEFSRDGRVACHLRIPDDNLVLDEARAIALFRIVQ 663 Query: 505 EALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLR 564 EAL+N +H+ A++V +++ Q L + D+GCG A R +G++ MR+R L Sbjct: 664 EALTNVARHAAATQVTISLEQTGRCWVLEISDDGCGFDSMAARMKSFGLVGMRERVLMLG 723 Query: 565 GDCRVRRRESGGTEVVVTFIP 585 G+ V GT + V IP Sbjct: 724 GEISVCSAPGSGTSITVC-IP 743 >UniRef50_C6CWJ2 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWJ2_PAESJ Length = 281 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 15/202 (7%) Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRE 447 ++R +ARELHD I+QSL + +++ L+ L +R+ QIR + + +R+ Sbjct: 78 FQQREQLARELHDGISQSLFLLSVKLDKLEHM--ELGNDARDTTVQIRQTVKHVYEDVRQ 135 Query: 448 LLTTFR--LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 + + + + A+ + + G KLD+QLP ++ + Q + L I RE Sbjct: 136 SIANLQSPAVVVDDSWLTAIHGAVNDLLQNSGVRAKLDWQLPEGVLSNKQLVELQSIIRE 195 Query: 506 ALSNALKHSQASEV-VVTVAQNDNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQ-- 561 AL N K++QA+EV V++ D ++DNG G P + YG+ +MRDRA+ Sbjct: 196 ALMNVRKYAQATEVQVISRQHGDEDFVCEIKDNGVGADPSQIDAKDRYGIRMMRDRAEQM 255 Query: 562 -------SLRGDCRVRRRESGG 576 S G+ R +SGG Sbjct: 256 GWLFDIKSAVGEGTTVRIQSGG 277 >UniRef50_Q21Y83 Putative PAS/PAC sensor protein n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21Y83_RHOFD Length = 495 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 6/199 (3%) Query: 394 IARELHDSIAQSLSCMKMQVSCLQ-MQGDALPESSRELLSQIRNELNASWAQLRELLTTF 452 +A+ LHD + Q+L+ ++M +Q +Q P + + +Q+ + + Q+R++L Sbjct: 287 LAKTLHDQLGQTLAAVRMAHETIQAVQPKDTPVAVQRQQAQLGKLVGHAIQQVRQVLVDL 346 Query: 453 RLQLTEP-GLRPALEASCEEYS---AKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS 508 R L E GL AL+ S + F + + ++ P P +AREAL Sbjct: 347 RPPLLEDQGLVAALDNELRNRSLTQPQIDFSIDVPPEIEPMRWPGEVEYAAFMVAREALE 406 Query: 509 NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN-AIRSNHYGMIIMRDRAQSLRGDC 567 NAL+H+ AS + V + ++L V DNG G+P A+ S H G+ M +RAQ++ Sbjct: 407 NALRHANASAIAVRLVGTQQSLQLQVSDNGVGIPAGAAVPSGHLGVFGMHERAQAIGATV 466 Query: 568 RVRRRESGGTEVVVTFIPE 586 V E GT V + PE Sbjct: 467 TVGAGEGRGTCVSFYWQPE 485 >UniRef50_C0INV3 Two-component system sensor protein n=1 Tax=uncultured bacterium BLR5 RepID=C0INV3_9BACT Length = 1032 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 111/231 (48%), Gaps = 42/231 (18%) Query: 378 HQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSR--------E 429 H + Q++L ER IA++LHD+I Q KMQ+ D PE+ + E Sbjct: 788 HLQFQERL---AERTRIAQDLHDTILQGFVSAKMQL--FAEVHDLPPETLKTKRLKGVYE 842 Query: 430 LLSQI----RNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQ 485 LL Q+ RN++ A + T F E C + +F +D++ Sbjct: 843 LLGQLIEEGRNKVKDLRAAEDDGFTDF-------------ERECLKIREEFDINKDMDFR 889 Query: 486 L----PPRLVPSHQAI--HLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGC 539 + PR P H I LLQI EAL NA HS+A+ + + + + L V+DNGC Sbjct: 890 MVIGGTPR--PLHPLIGSELLQIGHEALINAFLHSRATAIEIEIEYGLKSLNLLVRDNGC 947 Query: 540 GVPENAIRS---NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEK 587 G+ +RS H+G+ MR+RA+ ++ + ++ R GTEV+V+ +P + Sbjct: 948 GIDSEILRSGREGHWGLTGMRERAEKIKAEIKIWSRVDVGTEVLVS-VPRR 997 >UniRef50_Q0AF09 Multi-sensor signal transduction histidine kinase n=3 Tax=Nitrosomonas RepID=Q0AF09_NITEC Length = 498 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 4/199 (2%) Query: 389 EERATIARELHDSIAQSLSCMKMQ-VSCLQMQGDALPESSRELLSQIRNELNASWAQLRE 447 +ER IARE+HD I +L+ +K + V CL A PE R + + + ++ R Sbjct: 287 QERTRIAREIHDDIGGTLTAIKCELVPCLDNSSRA-PEFYRNKAAAVESLVDMVIDSTRR 345 Query: 448 LLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 + R + + G+ A++ E++ + G + + A+ + ++ +EAL Sbjct: 346 IALDLRPGVLDCGIVAAVQWQAREFNQRTGIACAVVCDDEEISLDGDLAVAIFRVFQEAL 405 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI-RSNHYGMIIMRDRAQSLRGD 566 +N KH+ ASEV V +++ +V L V DNGCG+ + + N +G+ MR+R Q L G Sbjct: 406 TNIAKHADASEVRVKLSEASGEVYLEVADNGCGITYPDMEKVNSFGIRSMRERCQQLGGR 465 Query: 567 CRVRRRESGGTEVVVTFIP 585 ++ GT V++ +IP Sbjct: 466 FHIQGEPQTGTGVMI-WIP 483 >UniRef50_C1XS12 Histidine kinase with GAF domain n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS12_9DEIN Length = 396 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 68/228 (29%), Positives = 115/228 (50%), Gaps = 21/228 (9%) Query: 371 ATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSREL 430 A L R +ER+ L +EERA +ARE+HDS+AQ L + + + + E++ E Sbjct: 178 ARLQEQRTREREA-LATLEERARLAREMHDSVAQLLFAADLSLRVAREGPNEQRETALER 236 Query: 431 LSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRL 490 + + + ++ +LR L+ R GL AL E S V++ ++ P Sbjct: 237 SALL---VGSALDELRGLVELLRPADLSQGLEAALCRLAERVSGS----VRVHFESPAYG 289 Query: 491 VP----------SHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG 540 +P A L +IA+E + NALKH++A + + + + V+L V+D+G G Sbjct: 290 IPVAWFRRAKRGEELAEALYRIAQEGVHNALKHAKAKNIWIRIEKKPKLVRLRVEDDGKG 349 Query: 541 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF-IPEK 587 +P R G++ + +RA+SL+G R+ R GG ++ V F IP+K Sbjct: 350 LPPRFSRG--LGLLSLEERAKSLQGTLRLGNRPGGGAKLEVAFPIPDK 395 >UniRef50_C0ZEI3 Two-component sensor histidine kinase n=2 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZEI3_BREBN Length = 411 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 14/206 (6%) Query: 384 QLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWA 443 Q+ V+EER IAR++HD++ SL+ + +Q+ L+ P++++E +RN L + Sbjct: 201 QVAVLEERTRIARDIHDALGHSLTSLIVQLHALKYMLQDGPDNAQE---AVRNMLGVAKQ 257 Query: 444 QLRELLT---TFRLQLTEPGLRPALEASCEEYSAKFGFPVKL---DYQLPPRLVPSHQAI 497 L ++ T T L T GL P L A + G ++L D +P + I Sbjct: 258 SLEDIRTSVHTLALDKTSLGLTP-LRALLSQAQKHTGIKMELICSDLDIP---LSQEMTI 313 Query: 498 HLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMR 557 +I +EA++N+L+HS A E++V + Q ++ + L+++D+G + I+ +G+ + Sbjct: 314 TFYRILQEAITNSLRHSDAKEILVIIEQKNDILLLSIRDDGSITSDQKIKPG-FGLTGIF 372 Query: 558 DRAQSLRGDCRVRRRESGGTEVVVTF 583 +R Q L G R RE G ++ +F Sbjct: 373 ERIQLLNGTLAYRIREPHGFQLDFSF 398 >UniRef50_UPI0001C31D26 integral membrane sensor signal transduction histidine kinase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31D26 Length = 394 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 104/214 (48%), Gaps = 16/214 (7%) Query: 377 RHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRN 436 R +E ++QL EER IARELHD +A SL+ + +Q S PE + ++LS I+ Sbjct: 177 RAEEARRQL--GEERLRIARELHDVLAHSLAMIHVQASTGAHVVARRPEQAEQVLSAIKQ 234 Query: 437 ELNASWAQLRELLTTFRLQLT-------EP-GLRPALEASCEEY---SAKFGFPVKLDYQ 485 + A LR + R EP G +P+L A EE + + G V +D Sbjct: 235 ASGEALADLRTTVGVLRADAADGDRGEHEPTGPQPSL-ARVEELIDGARRAGAEVSIDVS 293 Query: 486 LPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENA 545 R +P+ + +I +EAL+N ++H+ AS V V +A + V LT+ D+G G Sbjct: 294 GERRRLPAPVDVAGYRIVQEALTNVVRHAAASSVRVALAYEPDGVALTIDDDGRGA--AT 351 Query: 546 IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 + +G+ MR+RA L G R GG V Sbjct: 352 ANGDGHGLSGMRERAALLGGSVEAGPRPGGGFRV 385 >UniRef50_Q8ERY5 Two-component sensor histidine kinase n=1 Tax=Oceanobacillus iheyensis RepID=Q8ERY5_OCEIH Length = 356 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 8/200 (4%) Query: 387 VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLR 446 V+EER IAR+LHD+++Q L + M Q D PE ++ + ++ + + ++R Sbjct: 148 VIEERQRIARDLHDAVSQELFALAMLSEAAIKQLDLKPELAKAQMLEVSQSAHQAQTEMR 207 Query: 447 ELLTTFR-LQLTEPGLRPALEASCEEYSAK--FGFPVKLDYQLPPRLVPSHQAIHLLQIA 503 LL R + L+ L L E K F +K D QL + H+ +I Sbjct: 208 ALLLHLRPVYLSGESLIEGLHKLINELKQKSNLQFTLKFDDQLEMQETIEE---HIFRIV 264 Query: 504 REALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI--RSNHYGMIIMRDRAQ 561 E+LSN L+H+ A+EV V +++ ++ + ++DNG G + YG+ M++R++ Sbjct: 265 PESLSNILRHANATEVYVEISKKSEEIFILIEDNGEGFDMTGTSGKKTSYGLKTMKERSE 324 Query: 562 SLRGDCRVRRRESGGTEVVV 581 + G VR GT + + Sbjct: 325 EIGGTFTVRSNVDEGTYIQI 344 >UniRef50_B4CY61 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CY61_9BACT Length = 344 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 9/215 (4%) Query: 375 LDRHQERQQQLIVMEERAT--IARELHDSIAQSLSCMKMQVSCLQM----QGDALPESSR 428 L+ ++ +Q++I + ER I ++LHD + Q + + L++ QG +S+ Sbjct: 117 LEHSRQLEQEIIRISEREQRRIGQDLHDGLCQYYAAVGCAAGSLKLNLEKQGSPAAQSAA 176 Query: 429 ELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPP 488 E+ I + + + R L ++ E GL+ ALE + P Sbjct: 177 EIEELILKGVGEARSLARGLSP---VENEERGLQFALEDLVHTITKLQSIDCHFICTSPV 233 Query: 489 RLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS 548 + +++A HL +IA+EA++NA +H +AS V V ++ V+LT++DNGCG+P+ S Sbjct: 234 SVFDNNRANHLFRIAQEAINNATRHGKASVVGVRLSCEHGIVQLTIEDNGCGIPQPLPSS 293 Query: 549 NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 G+ IM+ RA+ + G V R GGT V +F Sbjct: 294 RGMGLNIMQYRARMIDGQLEVAPRPEGGTIVTCSF 328 >UniRef50_B9XCF3 Integral membrane sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XCF3_9BACT Length = 363 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 17/237 (7%) Query: 372 TLAL-DRHQER---QQQLIVMEERAT--IARELHDSIAQSLS--CMKMQVSCLQMQGDAL 423 T+AL + QER +++L+ + ER I +LHDS+ Q L+ + QV ++ +L Sbjct: 124 TVALTNEMQERTRLEKELLGISEREQRRIGHDLHDSLCQHLTGTALAGQVLGGRLAEKSL 183 Query: 424 PE--SSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVK 481 PE ++ L+ + + + R L T +L G + S +F K Sbjct: 184 PEAATANHLVELVEEAIELTRTLARGLHPT---ELEGAGFLNGFQELAATISERFKISCK 240 Query: 482 LDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV 541 + + AIHL +IA+EA++NA+KH +A E+++ + DN + L + DNG G+ Sbjct: 241 FENSRALEIHAPEGAIHLYRIAQEAITNAIKHGKAREIIIRLDMCDNVITLEIVDNGIGL 300 Query: 542 PENAIRSNH-YGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTH 597 PENA S G+ IM RA + + R + GT V+ +P +++ DTH Sbjct: 301 PENARSSGQGMGLRIMAYRASIIGASFNIERLPTKGTR-VICILPAT--SNLSSDTH 354 >UniRef50_C6WEB2 GAF sensor signal transduction histidine kinase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WEB2_ACTMD Length = 566 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 84/261 (32%), Positives = 130/261 (49%), Gaps = 22/261 (8%) Query: 327 GTTLKWRLADSHTQYGILLATLPQGR-HLSHDQQQLVDTLVEQLTATLALDRHQERQQQL 385 G + R A T G+LLA G +Q L+ + Q L L Q ++ + Sbjct: 313 GVAVPLRTASQVT--GVLLAARDVGAAQFGAEQVPLLASFAAQAAVALELAETQRNRRLV 370 Query: 386 IVMEERATIARELHDSIAQSL--SCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWA 443 V+E+R IAR+LHD + Q L + M +Q + +++ L RE + ++L+ + Sbjct: 371 DVLEDRDRIARDLHDHVIQRLFATGMSLQGALNRVEDPKL----RERVDNAVHQLDQTVL 426 Query: 444 QLRELLTTFRLQLT--EPGLRPAL---EASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIH 498 ++R T F LQ EPGLR L + E+SA V+++ + VP H H Sbjct: 427 EIRT--TIFDLQAADDEPGLRRRLLDIVSQVTEHSA-LTPAVRMNGTVD-NSVPDHVGEH 482 Query: 499 LLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRD 558 + RE +SNA++HS ASE+ VT+ + D Q+ ++V DNG G+PE RS G+ + + Sbjct: 483 AEAVVRELVSNAVRHSGASELTVTI-EADRQLTISVVDNGIGMPEKVARS---GLRNLDE 538 Query: 559 RAQSLRGDCRVRRRESGGTEV 579 RA+ L G V GGT V Sbjct: 539 RARRLGGSAVVEACAGGGTRV 559 >UniRef50_C1F9F5 Two component regulator propeller/histidine kinase domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9F5_ACIC5 Length = 1025 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 5/201 (2%) Query: 387 VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLR 446 V+ ER IARE+HD++AQ + + +Q+ + E +R L R+ +S R Sbjct: 817 VLRERTRIAREIHDTLAQGFAAVSVQLEVVSRLLPNATEGARHALDTARSLARSSLQDAR 876 Query: 447 ELLTTFRLQLTE-PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 + R Q +E L L + A +L+ R + L +IA+E Sbjct: 877 TSIWDLRSQSSEQEDLATRLRKLADHLCAPANIKAQLEVNGAYRPLTPEVETELTRIAQE 936 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNG---CGVPENAIRSNHYGMIIMRDRAQS 562 A+ NA++HS+ + + + ++ ++ Q++L+V+DNG G P A R HYG+ M +RA+ Sbjct: 937 AIVNAVRHSETASIALRLSFHERQIELSVRDNGRGFSGAPP-AARPGHYGITGMHERAER 995 Query: 563 LRGDCRVRRRESGGTEVVVTF 583 + G + R GTEV +T Sbjct: 996 IGGKLTIESRPGEGTEVHLTL 1016 >UniRef50_A1WDW7 Multi-sensor signal transduction histidine kinase n=14 Tax=cellular organisms RepID=A1WDW7_VEREI Length = 468 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 113/220 (51%), Gaps = 12/220 (5%) Query: 362 VDTLVEQLTATLA-LDRH--QERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQM 418 ++ LV + TATL+ L H Q R+Q ER +ARELHD + L+ K+ V+ L+ Sbjct: 243 LEGLVRERTATLSELANHLQQVREQ------ERGHLARELHDELGALLTAAKLDVARLKS 296 Query: 419 QGDALPESSRELLSQIRNELNASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFG 477 + DA E L+ + LN+ A R ++ R L+ GL ALE E++ G Sbjct: 297 KLDAAAPDIAERLAHLTQTLNSGIALKRRIIEDLRPSSLSNLGLTAALEILTREFAGHAG 356 Query: 478 FPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDN 537 ++++ L +P + + ++ +EAL+N K+++A +V+V+V + V + V+D+ Sbjct: 357 --IEVETSLESVQLPEAVQLTVYRMVQEALTNIGKYAKAQQVLVSVHAHPGHVAVQVRDD 414 Query: 538 GCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 G G A+ +G+ MR R ++ G + R GGT Sbjct: 415 GQGFDPAALPPTSHGLAGMRHRVEAAGGRLSITSRPGGGT 454 >UniRef50_C7RBI0 Histidine kinase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI0_KANKD Length = 247 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 7/197 (3%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLREL 448 +ER IARELHD + Q L+ + Q+ + +G+ P+ E L+ R L+ + RE+ Sbjct: 45 DERKHIARELHDGVGQLLTALINQLQQMHKEGEPDPKELEEALTLARQALSDT----REI 100 Query: 449 LTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 R + L + GL PAL+ K + L QL L Q + + ++ +EA+ Sbjct: 101 SRLMRPRILDDLGLIPALQWLSRVMGEKNSIKIDLHEQLSVNLDDETQTL-VFRVVQEAI 159 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS-NHYGMIIMRDRAQSLRGD 566 +NA+KH+ A+ + +TV + + L ++DNG G+ + S +G+ MRDR + G Sbjct: 160 TNAIKHADATHIDITVIATERMLVLKIRDNGVGMTKETSESVEGFGLSAMRDRVAAFGGQ 219 Query: 567 CRVRRRESGGTEVVVTF 583 V + G E+ V Sbjct: 220 LMVESQPGDGCEIKVVI 236 >UniRef50_C0N6H4 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H4_9GAMM Length = 570 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 106/454 (23%), Positives = 192/454 (42%), Gaps = 49/454 (10%) Query: 147 MRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGR 206 + I +++ + V+ VF+++ L + + W L+P ++LL S D R Sbjct: 144 LDIRSILALGLVIFVFVSIFLYWGVDWF----LRPLQRLLQALSGFERGDLHLRLPNFTL 199 Query: 207 NEMAMLGTALNNMSAELAES------YAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHS 260 EM + N M L S A+L ++ + L+H I A R S Sbjct: 200 AEMNQISHTFNRMGQALELSTAENQRLAMLVRQSGDAILSLDHAGNITFCNSTAERLFAS 259 Query: 261 RAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGV 320 + P+ + S G N + I + + + EN + +PD + D P Sbjct: 260 QTPILKGESLAHLGFANH--YKQISHILENCESTENMETVLVRPDGSQVDLLLSTVP--- 314 Query: 321 LPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQE 380 L+D+ + L+ TL R ++ +Q + QL T L +H + Sbjct: 315 -------------LSDNEDRVIGLICTL---RDITELKQ--AEAARNQLRETRLLAKHMD 356 Query: 381 RQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNA 440 Q+ ER +ARELHD + Q L+ +K ++ + + I + + Sbjct: 357 EAQE----AERRHLARELHDELGQCLTAIKTDAVLIRNRTETTEPRVFNSAQAIIDTASH 412 Query: 441 SWAQLRELLTTFRLQ-LTEPGLRPALE---ASCEEYSAKFGFPVKLDYQLPPRLVPSHQA 496 + + ++T R L + GL P LE AS + F +LD + Sbjct: 413 IYDVVHNMITRLRPSPLDDLGLVPTLEQCIASWQSRETTINF--QLDVNGTLNNLNEIMN 470 Query: 497 IHLLQIAREALSNALKHSQASEVVVTVA----QNDNQVKLTVQDNGCGVPENAIRSN-HY 551 + + ++ +EA++NA++H+ ASE+ V V+ D+++ + +QDNG G+ S+ + Sbjct: 471 MTVFRVVQEAITNAVRHADASEIKVKVSAEQGSEDDKLIIDIQDNGKGMVVKDFHSDVDF 530 Query: 552 GMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 G++ MR+RAQSL G + G +++T IP Sbjct: 531 GLLGMRERAQSLGGKFELNSEPGAGVRILIT-IP 563 >UniRef50_Q5SJ33 Sensor histidine kinase n=3 Tax=Thermus RepID=Q5SJ33_THET8 Length = 515 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 110/204 (53%), Gaps = 8/204 (3%) Query: 381 RQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNA 440 + ++L + EER IARE+HD +AQSL+ M +++ ++ + E++ L+++R L A Sbjct: 309 KAEELAINEERTRIAREIHDGLAQSLAFMALKLDLVERLWEKDKEAALGALAEVRETLRA 368 Query: 441 SWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQA-IH 498 ++R + R + L G +L + ++ + GF V+L LP R+ S + + Sbjct: 369 QIREVRRSIFALRPIDLERYGFLESLRRYAQAFAEQAGFRVQLS--LPERVGLSQASELV 426 Query: 499 LLQIAREALSNALKHSQASEV-VVTVAQNDNQVKLTVQDNGCG--VPENAIRSNHYGMII 555 L ++ +EAL+NA KH++ + V VV + +L V+DNG G VPE A +G+ Sbjct: 427 LFRVLQEALTNAAKHARPTRVEVVLEPLGERGARLVVRDNGRGFAVPE-AQGLGGFGLTQ 485 Query: 556 MRDRAQSLRGDCRVRRRESGGTEV 579 MR+R ++ G V GTEV Sbjct: 486 MRERVEARGGRFWVVSAPGRGTEV 509 >UniRef50_A3NKQ6 Signal transduction histidine kinase n=29 Tax=Burkholderia RepID=A3NKQ6_BURP6 Length = 492 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 15/195 (7%) Query: 384 QLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRE--------LLSQIR 435 Q I EE+ IARELHD + Q L+ +KM V+ + + +SR L+ Q+ Sbjct: 279 QSIREEEKTRIARELHDDLGQQLTALKMAVTLVDNELKDAGWASRTSRLPNVYALIGQLL 338 Query: 436 NELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQ 495 + + A LR ++ L + GL A+E E+ ++ PV + Sbjct: 339 DSVRRIAADLRPVM------LDDLGLMAAIEWLTHEFVERYRIPVTSRIEADDIAFTRGS 392 Query: 496 AIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNH-YGMI 554 A + +I +EAL+N +HS+A+EV + + +++ + + DNGCG + + H G++ Sbjct: 393 ATEVFRIVQEALTNVARHSEATEVTLDIIRDEPNCIVRIADNGCGTARDTRPNRHSLGLL 452 Query: 555 IMRDRAQSLRGDCRV 569 MR+RA L G+ R+ Sbjct: 453 GMRERAARLGGEIRI 467 >UniRef50_C1RNK2 Signal transduction histidine kinase, COG4585 n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RNK2_9CELL Length = 388 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 5/196 (2%) Query: 396 RELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ 455 RE+HDS+ ++L + + L D+ P+++RE + + + + A+ R LLT R Sbjct: 188 REMHDSLGKTLHGVALAAQTLPSWVDSDPDAAREHARLLADGAHRAAAEARGLLTRMRAD 247 Query: 456 LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQ 515 + L L C + + G P L + + +L + EAL N +H++ Sbjct: 248 QPDRPLAQVLAELCATWQGECGTPCHFRADRAVDLSTAAR-YEVLAVVAEALENVRRHAR 306 Query: 516 ASEV-VVTVAQNDNQVKLTVQDNGCGV---PENAIRSNHYGMIIMRDRAQSLRGDCRVRR 571 AS V VV A D +V++ V+D+G G P+ A HYG++ MR+RAQS+ + V Sbjct: 307 ASTVGVVLAALPDGRVQVEVRDDGVGFSPSPDGAGPRGHYGLVGMRERAQSVGAELTVAS 366 Query: 572 RESGGTEVVVTFIPEK 587 GT VV+ PEK Sbjct: 367 APGEGTSVVIEVDPEK 382 >UniRef50_Q1IM12 PAS sensor signal transduction histidine kinase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IM12_ACIBL Length = 312 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 28/191 (14%) Query: 390 ERATIARELHDSIAQSLSCMKMQV-----------SCLQMQGDALPESSREL---LSQIR 435 ERA IARELHD I+QSL + Q+ AL + RE+ +S++ Sbjct: 111 ERARIARELHDDISQSLMILTFQMERAGKPVSNEPGKRHPDAPALADDLREVVRRISKMA 170 Query: 436 NELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQ 495 +EL++S L GL A++ +C E+S ++ PV + P+ + + Sbjct: 171 HELHSS-------------SLEYLGLSRAIQGACREFSKQWKIPVDCELVDLPQKLDNMT 217 Query: 496 AIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP-ENAIRSNHYGMI 554 ++ LL+I +EAL N KHS+A+ V V ++ ++Q+KL ++DNG G E A + G++ Sbjct: 218 SLCLLRITQEALHNIAKHSRATNVTVQLSSTEDQLKLVIRDNGIGFDVEQAKLAGGIGLL 277 Query: 555 IMRDRAQSLRG 565 MR+R + G Sbjct: 278 SMRERTNLVHG 288 >UniRef50_A4XZI6 Multi-sensor signal transduction histidine kinase n=17 Tax=Pseudomonas RepID=A4XZI6_PSEMY Length = 801 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 116/225 (51%), Gaps = 17/225 (7%) Query: 365 LVEQLTATLALDRHQERQQQL------IVMEERATIARELHDSIAQSLSCMKMQVSCLQM 418 + E A LAL + R ++L + EE+A IARE+HD + Q L+ +K++ + ++ Sbjct: 568 ITENKLAELALADSRARLRELSAHLESVREEEKARIAREVHDELGQVLTVLKLETAMCEL 627 Query: 419 Q-GDALPESSRELLSQIRNELNASWAQL-RELLTTFRLQLTEPGLRPALEASCEEYSAKF 476 +PE L S R L A QL R++ T R + + G+ A+E + + Sbjct: 628 ACAGQVPELDERLASMKR--LIAQLFQLVRDVATALRPPILDAGIASAIEWQVRRFEERT 685 Query: 477 GFP--VKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTV 534 P V++ LP +P QAI L +I +EAL+N ++H+ A VVV + Q + + L+V Sbjct: 686 QIPCLVEVPEHLP--RLPDAQAIGLFRILQEALTNVMRHAGAHSVVVRLWQEEGGLCLSV 743 Query: 535 QDNGCGVPENAIR--SNHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 D+G G + A+R +G++ M++R L G ++ R GT Sbjct: 744 SDDGKGF-DAAMRKPGQSFGLVGMQERMLMLGGQLQIDSRPGEGT 787 >UniRef50_Q9KER5 Two-component sensor histidine kinase n=1 Tax=Bacillus halodurans RepID=Q9KER5_BACHD Length = 393 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 106/211 (50%), Gaps = 8/211 (3%) Query: 387 VMEERATIARELHDSIAQSLSCMKMQV-SCLQMQGDALPESSRELLSQIRNELNASWAQL 445 +MEER ++RE+HD+I +L+ + + S ++ E + E L++ + + A++ Sbjct: 180 LMEERVRLSREIHDTIGHTLTTAIVGLESVKRLLQHQRTEEAFEKLTKAQEHIKKGLAEV 239 Query: 446 RELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 R + T + + P+LEA +E S G + P+L P Q + L + +E Sbjct: 240 RRSVKTLHEKPSFLQFVPSLEALAKETSESTGVSIHCHIGDLPKLTPE-QELTLFRAFQE 298 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRG 565 L+N ++H Q++E T+ + ++ + DNG I+ +G+ +M DR QSL G Sbjct: 299 GLTNGIRHGQSTEFFFTLEAKEERIWFELIDNGQTT--TPIKPG-FGLTMMNDRVQSLGG 355 Query: 566 DCRVRRRESGGTEVVVTFIPEKTFTDVQGDT 596 + + R SGG + +T +P TD GD+ Sbjct: 356 EIHISRHGSGGVHLGIT-LPMTKPTD--GDS 383 >UniRef50_B2UDW5 Multi-sensor signal transduction histidine kinase n=12 Tax=Burkholderiaceae RepID=B2UDW5_RALPJ Length = 485 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 72/260 (27%), Positives = 125/260 (48%), Gaps = 15/260 (5%) Query: 340 QYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLA-LDRHQERQQQLIVMEERATIAREL 398 Q+ LA + R ++ ++ Q +D +V + T L+ L H +R + +E+ +AREL Sbjct: 205 QHAKRLAVTERERDMAEEESQKLDRMVRERTRQLSDLAAHLQR----VTEDEKTRLAREL 260 Query: 399 HDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LT 457 HD + L+ KM + L+ + A + E ++++ ++ R L+ R L Sbjct: 261 HDELGAILTATKMDLHWLRSRIHANEPAVSEKITRVMAHVDQGIQIKRRLIEDLRPTILL 320 Query: 458 EPGLRPALEASCEEYSAKFGFPVKLDYQLP---PRLVPSHQAIHLLQIAREALSNALKHS 514 GL AL E+ + G+ ++ LP P+L AI L +I +E+L+NA K++ Sbjct: 321 NLGLVEALSQLTEDVGTRNGWHTEV--SLPDDMPKLTDD-AAIALYRIVQESLTNASKYA 377 Query: 515 QASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS---NHYGMIIMRDRAQSLRGDCRVRR 571 A+ V V + + V+L V+DNG G P + R H+G++ M RA +L G + Sbjct: 378 HATTVSVALDVGEEGVRLRVRDNGRGFPADIERRRMVGHHGLLGMEQRAIALGGTLVIDS 437 Query: 572 RESGGTEVVVTFIPEKTFTD 591 GG ++V P D Sbjct: 438 MPGGGVTIIVELPPSDAVFD 457 >UniRef50_D2AUR1 Histidine kinase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AUR1_STRRD Length = 364 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 17/219 (7%) Query: 365 LVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP 424 L+++LT T A E Q + V+ ER +ARE+HD++AQ LS + + + A P Sbjct: 160 LIDELTRTRA--ELAETQHEAGVLAERQRLAREIHDTLAQGLSSIVLLLR-------AAP 210 Query: 425 ESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDY 484 + + R+ + A+ R F LT PGL +LE + ++ G +LD Sbjct: 211 PDPSGYVEEARHAAEDNLAEARR----FVHALTPPGLDGSLEEALRRLCSREGAAFQLDG 266 Query: 485 QLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN 544 + P +P I LL+IA+ L+N +H++A+ +T+ +++V + + D+G G + Sbjct: 267 E--PYTLPRRAEIALLRIAQGGLANVSRHAEAARAALTLTYMEDEVAMDIVDDGRGF-DP 323 Query: 545 AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 RS + G+ +RDRA L G V GT + VT Sbjct: 324 LTRSGN-GLGFIRDRAAELGGAVTVESAPGLGTALAVTL 361 >UniRef50_D0L9K1 Histidine kinase dimerization and phosphoacceptor region n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L9K1_GORB4 Length = 485 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 73/230 (31%), Positives = 108/230 (46%), Gaps = 21/230 (9%) Query: 383 QQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASW 442 +Q +V EER IARELHDS+ QS+ + + +M+ D P ++ L R NA Sbjct: 253 RQRLVTEERERIARELHDSVTQSVLSAGVHIEVCRMESD--PRTADRLEVAGRLTRNA-V 309 Query: 443 AQLRELLTTFRLQLTEPGLRPA--LEASCEEY-SAKFGFPVKLDYQLPPRLVPSHQAIHL 499 QLR ++ + GL A L+ C + V++ ++ R +P + Sbjct: 310 EQLRSVIYALNQAPSVEGLSLAEVLDELCSMHLPDDLATRVRVTGRI--RDLPDDVQHAV 367 Query: 500 LQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR-----------S 548 L+IA EAL N H+ A+ V +A D+ + L+V D+G G P + R Sbjct: 368 LRIAGEALFNTAVHADATRARVNLAYLDDAISLSVDDDGAGDPVHLRRVLRAAMPGDLAG 427 Query: 549 NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI--PEKTFTDVQGDT 596 H G+ M RA L GD R+RR GG +VVT PE+T +G T Sbjct: 428 RHRGLANMSARAAELGGDFRIRRSRLGGVRIVVTIPTGPERTVPTQRGPT 477 >UniRef50_C6NZS6 Multi-sensor signal transduction histidine kinase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZS6_9PROT Length = 902 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 101/195 (51%), Gaps = 7/195 (3%) Query: 394 IARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNEL---NASWAQLRELLT 450 IAR+LHD + Q L+ ++M +S ++MQ A S+ LL QI+N L +++ +R++ + Sbjct: 705 IARDLHDELGQILTVLRMDLSVMRMQFGA---SNPALLDQIKNILSRVDSTIQVVRDVAS 761 Query: 451 TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNA 510 R E G+ ALE E++ + L + +A + +I +E+L+N Sbjct: 762 KLRPGALEAGIVAALEWQVAEFAKRSDIHFDLKIDESNIDLDDERATAIFRIVQESLTNV 821 Query: 511 LKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVR 570 +H+ A+ V V++++ + L + D+G G + +G++ +R+R+ L G +R Sbjct: 822 TRHAAAANVCVSLSRLQDNYILEIIDDGRGFDTEMLSGRTFGLMGVRERSMMLEGTVDIR 881 Query: 571 RRESGGTEVVVTFIP 585 GT V V +IP Sbjct: 882 SSPGKGTHVTV-YIP 895 >UniRef50_D2BHE9 Sensor histidine kinase n=5 Tax=Dehalococcoides RepID=D2BHE9_DEHSV Length = 381 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 6/199 (3%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLREL 448 +ER IA+ELHD AQ L + + Q L E + L +++N +N + +++R Sbjct: 170 DERRRIAQELHDDTAQDLIVISRAIDRFVTQNPNLGEDNLAELEELQNHVNRTLSEVRRF 229 Query: 449 LTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 R L + GL PALE + S FG + +D R + L +I +E+L Sbjct: 230 AQDLRPSVLDDLGLIPALEWLIPDLSKHFGINIDIDVNGEIRRFAPETELVLFRIVQESL 289 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG--VPE---NAIRSNHYGMIIMRDRAQS 562 N KH+QA++ V + + LT++DNG G +PE + G+ M++RAQ Sbjct: 290 RNVGKHAQATKAWVYIDFGKYKATLTIKDNGRGFLLPERVGDLAALGKLGLTGMQERAQL 349 Query: 563 LRGDCRVRRRESGGTEVVV 581 + G ++ + GT V V Sbjct: 350 IGGRLSIQSKPEVGTMVTV 368 >UniRef50_Q74GJ3 Sensory box histidine kinase n=1 Tax=Geobacter sulfurreducens RepID=Q74GJ3_GEOSL Length = 830 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 120/438 (27%), Positives = 185/438 (42%), Gaps = 81/438 (18%) Query: 214 TALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQAN--------------RRLH 259 TA A L E+ LE RV+E+TA LE N+ L A RRL Sbjct: 398 TARKAAEAALREAKEQLELRVRERTADLEQANRALQEEVAARSQAEESLRASESRFRRLV 457 Query: 260 SRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGC------ 313 APL + L+ + R L Y +D +E+ + C D C Sbjct: 458 QMAPLPLCFADASGTLRYVND-RFTRLFGYAPEDIPTQEEWWSR---VCTDGRCRGETAD 513 Query: 314 ------QLCPRGV-------LPVGDRGTTLKWRLADSHTQYGILLATLPQ--GRHLSHDQ 358 Q P G V + ++ T G +LAT R L+ D+ Sbjct: 514 AWQASVQRGPNGASDIEPAEFRVACKNGDIRLVEVSGITIEGTVLATFIDITERRLAEDE 573 Query: 359 ----QQLVDTLVEQLTATLALDRHQ------ERQQ----------QLIVMEE--RATIAR 396 ++L++ LV Q TA L L + ER++ +L MEE R +A Sbjct: 574 LHRHRELLEELVHQRTAELKLRNMELASEIAERRRAEAALRCYTRRLTEMEEDLRKKLAA 633 Query: 397 ELHDSIAQSLSCMKMQVSCLQ---MQG-----DALPESSRELLSQIRNELNASWAQLREL 448 ELHD I + L+ + + S + +QG A E + L+ I + A+LR Sbjct: 634 ELHDEIGRDLTALNLNFSVIGNRLVQGPDGCLKARIEDTERLIEDISRTVRGLTAKLRPP 693 Query: 449 LTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKL-DYQLPPRLVPSHQAIHLLQIAREAL 507 + L + GL AL + +S + G V + PR+ P+ + I L +I +EAL Sbjct: 694 V------LDDYGLPAALRWHADLFSRRTGIEVTVRGADSVPRM-PAEKEIALFRIVQEAL 746 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG-VPENAIRS---NHYGMIIMRDRAQSL 563 +N KH+ A V V++ D +V+L+V D+G G PE+A + + +G+ IMR+RA+ + Sbjct: 747 TNCSKHANAGNVKVSLDHGDGRVRLSVVDDGIGFAPESASPTPAGSGWGLTIMRERAELI 806 Query: 564 RGDCRVRRRESGGTEVVV 581 G R+ GT + V Sbjct: 807 GGTFRLNTAPGKGTVLTV 824 >UniRef50_Q9X8S1 Putative two-component system sensor kinase n=2 Tax=Streptomyces RepID=Q9X8S1_STRCO Length = 441 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 11/234 (4%) Query: 372 TLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELL 431 TL L Q + + V EER IARELHD +A ++ + +Q + + ++R+ L Sbjct: 207 TLRLRAEQADRARREVAEERVRIARELHDVVAHHIAVINVQAGLARFVFRSDARTARDAL 266 Query: 432 SQIRNELNASWAQLRELLTTFR---LQLTEPGLRPALEASCEEYSAKF---GFPVKLDYQ 485 I + A+LR +L R +Q + P L+ +E + G V+L Sbjct: 267 DTIEGASGEALAELRRMLGLLRADGVQGADGAPAPGLD-QLDEMVTRVRTGGVGVRLRVT 325 Query: 486 LPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNG-CGVPE- 543 PR +P + + ++ +EAL+N LKH+ ++ V +A +V ++V D G G P+ Sbjct: 326 GTPRPLPPGVQLCVYRVVQEALTNVLKHAPGADAAVELAYRAGEVTVSVTDGGPAGGPDP 385 Query: 544 -NAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDT 596 +G+I MR+RA+ G V R GG V +T +P +GD+ Sbjct: 386 VTPAEGGGHGLIGMRERAKLYGGTIAVGPRSEGGFGVRLT-LPTPVQVARRGDS 438 >UniRef50_Q5NY28 Sensory histidine kinase n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY28_AZOSE Length = 827 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 20/220 (9%) Query: 375 LDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESS----REL 430 L RH Q+ ER +A ELHD + +L+ +++ +S L ALP S + Sbjct: 586 LSRHMVDVQE----NERRKLAGELHDRASPNLAALQLTLSNLAC---ALPASVLAEFEPM 638 Query: 431 LSQIRNELNASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQ-LPP 488 L + L + +RE+ T R L GL PAL+ ++++ + G V+LD L Sbjct: 639 LGDAQALLLDTATGIREICTNLRPATLDYAGLIPALQDYAQQFTRRTGTAVRLDLAPLKT 698 Query: 489 RLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG-----VPE 543 +L+P+ Q++ L +IA+EAL+N KH+ A + + +A+ D+ + L + D+G G + E Sbjct: 699 QLLPNVQSL-LFRIAQEALTNCAKHADAGTIHLQLAETDDALILKISDDGVGFDSCLLGE 757 Query: 544 NAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + + G+I M++RA+ G + GTE+ VTF Sbjct: 758 SGSKPG-LGLITMKERAEFAGGRFTITSNPESGTEITVTF 796 >UniRef50_C1CWD4 Putative histidine kinase, classic; putative membrane protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1CWD4_DEIDV Length = 575 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 3/206 (1%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLREL 448 +ERA +ARELHDS+AQ+L + + + D P +RE L ++++ L Sbjct: 366 QERARLARELHDSVAQALYGITLGAKTARATLDRDPGRARESLDYTIRLAEGGVSEMKAL 425 Query: 449 LTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 L + R L E GL AL A+ G V + + P L P QA ++A+EAL Sbjct: 426 LFSLRPDALEEGGLIAALTQHAHALEARHGLRVHAELRAEPHLTPDAQAAAY-RVAQEAL 484 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDC 567 N +KH++A++V + V ++ V ++V+D+G G + G MR+RA G Sbjct: 485 HNVVKHARATQVWLCVHESLGVVTVSVRDDGRGFDPASQGRGTLGQRSMRERAAGAGGTL 544 Query: 568 RVRRRESGGTEVVVTFIPEKTFTDVQ 593 V+ GT +V IP + +Q Sbjct: 545 DVQSAPGEGT-IVTLRIPAASAAPLQ 569 >UniRef50_B9XQH3 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XQH3_9BACT Length = 843 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/226 (29%), Positives = 106/226 (46%), Gaps = 10/226 (4%) Query: 366 VEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPE 425 VE + + + ER+ I E+ I +LHD + Q L+ + S L + E Sbjct: 606 VEGMARDITERKRLEREILEISNREQRRIGHDLHDGVCQQLAGIAFMTSTLAEKLQEKGE 665 Query: 426 SSRELLSQIRNELNASWAQLRELLTT-FRLQLTEPGLRPALEASCEEYSAKFGFPVKLDY 484 + + +I LN + Q R + F ++L E GL ALE F + Sbjct: 666 AESAQVERISGLLNTAINQTRSVARGLFPVRLEENGLVSALEELAANAGDLFKISCRFVS 725 Query: 485 QLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ-NDNQVKLTVQDNGCG--V 541 + PP V + A+HL IA+EA++NA KH++A V +T+ + +LTV+D+G G + Sbjct: 726 EEPPVSVDNGIALHLYYIAQEAVTNAAKHAKAQNVFITLEPVKGGRYELTVKDDGVGLAI 785 Query: 542 PENAIRSNHYGMI--IMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 PE A H GM IM RA+ + ++ + GT+V F P Sbjct: 786 PEKA----HPGMGIRIMHYRARVIGATLSLKSKPGSGTQVSCLFFP 827 >UniRef50_C1B0L5 Two-component histidine kinase n=5 Tax=Rhodococcus RepID=C1B0L5_RHOOB Length = 559 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 23/248 (9%) Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 G+L+ T D+ ++++ + + Q +Q+ L V+ +R IAR+LHD+ Sbjct: 318 GVLVVTARGTTAWDPDEVARLESVADLAAVAVEFSDQQSKQRLLSVLADRDRIARDLHDN 377 Query: 402 IAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGL 461 + Q L M + GD +P+ R +++ +L+ + ++R T F LQ T Sbjct: 378 VIQRLFATGMSLQSTHAVGD-VPDGVRSIVATAVEQLDRTVREIRT--TIFDLQATGVAS 434 Query: 462 RPALE----------ASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNAL 511 +L S + F +D +P R+ P H + REALSNAL Sbjct: 435 ATSLRRRLLDVIGDLTSHSPVAPNVQFTGAIDTLVPSRIHP-----HAEAVLREALSNAL 489 Query: 512 KHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRR 571 +H++A+ + ++VA D+ + +TV D+G G+ + A RS G+ + RA+ G C V Sbjct: 490 RHARATTIDISVAAGDD-LTVTVADDGIGIADGARRS---GLDNLDRRAEHCGGTCTVDS 545 Query: 572 RESGGTEV 579 + GGT V Sbjct: 546 AD-GGTVV 552 >UniRef50_Q1AZP1 Periplasmic sensor signal transduction histidine kinase n=2 Tax=Actinobacteria (class) RepID=Q1AZP1_RUBXD Length = 508 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 11/209 (5%) Query: 377 RHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRN 436 R ER ++ V+EER +A E+HD++AQ + + V+ L+ G AL L + Sbjct: 284 RLVERARRAGVLEERQRLAHEIHDTLAQGFTSI---VTNLEAAGGALQRDRAALRRHLEQ 340 Query: 437 ELNA---SWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVP 492 L S ++ R L+ R + L E L AL +S+ G P ++ PR +P Sbjct: 341 ALAVARESLSEARRLVWALRPEPLEEAPLPEALRRLAARWSSSSGIPARVLVTGEPRALP 400 Query: 493 SHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG----VPENAIRS 548 + + LL++A+EAL+N KH++A V +T++ ++V L V+D+G G P Sbjct: 401 ADPEVTLLRVAQEALANVRKHARAGRVAITLSYIGDRVALDVRDDGVGFDPAAPSPGDDG 460 Query: 549 NHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 + +G+ MR+R G V GT Sbjct: 461 SGFGLRSMRERVGRAGGTLSVESAPGEGT 489 >UniRef50_C9NA65 Histidine kinase n=5 Tax=Streptomyces RepID=C9NA65_9ACTO Length = 402 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 100/218 (45%), Gaps = 14/218 (6%) Query: 375 LDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQI 434 L+R +E Q ++ V ERA IARELHD +A ++S M +Q D+ P+ +R+ L I Sbjct: 175 LEREREAQSKVAVAAERARIARELHDVVAHNVSVMVVQADGAAYVMDSSPDQARQALETI 234 Query: 435 RNELNASWAQLRELLTTFRLQLTEPG----LRPALEASCEEYSAKF---GFPVKLDYQLP 487 + A++R LL R +E +P +E EE K G V + Sbjct: 235 SGTGRQALAEMRRLLGVLRTGDSEESGEYVPQPDVE-QIEELVGKVRETGLTVDFKIEGT 293 Query: 488 PRLVPSHQAIHLLQIAREALSNALKHSQA-SEVVVTVAQNDNQVKLTVQDNGCGVPEN-- 544 PR +PS + +I +EAL+N KH + V + D+ + L V+D+G G P Sbjct: 294 PRPLPSGVELTAYRIVQEALTNTRKHGGPDAGASVRLVYFDDGLGLLVEDDGRGAPHELY 353 Query: 545 ---AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 GMI MR+R + G R+ GG + Sbjct: 354 EDGGADGAGQGMIGMRERVGMVGGTLDAGPRQGGGFRI 391 >UniRef50_A3TM13 Putative two component system histidine kinase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TM13_9MICO Length = 404 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 121/231 (52%), Gaps = 13/231 (5%) Query: 357 DQQQLVDTLVEQLTATLAL-DRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSC 415 ++Q+LVD+LV+ AL D Q++ V++ER ++R++HD++AQ S + + Sbjct: 165 ERQRLVDSLVKAQDEMAALHDELASSQREAGVLQERGRLSRDIHDTLAQGFSSIVLLARG 224 Query: 416 LQM-QGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYS 473 + G+A +LL+QI + +++ + RE+++ + L++ GL AL + S Sbjct: 225 RSVVAGEA---GLTDLLTQIESTASSNLTEAREVVSALAPKTLSDSGLVQALGRIVDTLS 281 Query: 474 AKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLT 533 + G +L + P +P+ + LL+ A+ AL+N HS A VVVT++ +++V L Sbjct: 282 RETGIATELRVEGEPLHLPTANEVALLRTAQGALANVRSHSGAGRVVVTLSGLEDRVLLE 341 Query: 534 VQDNGCG-----VPENAIRSNH--YGMIIMRDRAQSLRGDCRVRRRESGGT 577 V D+G G V E A +H YG+ R R + L GD + GT Sbjct: 342 VVDDGRGFDPEAVAERAGAYSHGGYGLPSTRARLRELGGDLVLESAPGEGT 392 >UniRef50_A3DEX1 Histidine kinase n=5 Tax=Clostridium RepID=A3DEX1_CLOTH Length = 392 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/217 (28%), Positives = 113/217 (52%), Gaps = 19/217 (8%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLREL 448 EER +ARE+HD AQS+S + ++ + D+ PE +++ L +++ + + +R++ Sbjct: 180 EERQRVAREIHDGPAQSMSNIVLKAEICERLVDSDPEKAKDELRTLKSVVRDTLRDVRKI 239 Query: 449 LTTFR-LQLTEPGLRPALE---ASCEEYSA-KFGFPVKLD-YQLPPRLVPSHQAIHLLQI 502 + R + L + GL P L+ +C E S K F + QL P V S L+Q Sbjct: 240 IYDLRPMSLDDLGLIPTLQRYIETCREESGIKITFKTRGTCEQLKP--VVSLTVFRLVQ- 296 Query: 503 AREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNH------YGMIIM 556 EA++N KH++A +V + + + ++KL + DNG G ++++SN +G+I M Sbjct: 297 --EAVNNIKKHARADKVTINLEFLEKELKLYIADNGVGFDFDSLKSNEEDINKGFGLISM 354 Query: 557 RDRAQSLRGDCRVRRRESGGT--EVVVTFIPEKTFTD 591 R+R + L G + GT + V +PE+ ++ Sbjct: 355 RERVELLDGKFEIDSAVGKGTRLNITVPLLPEEGVSN 391 >UniRef50_C1XXG1 Signal transduction histidine kinase, COG4585 n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XXG1_9DEIN Length = 490 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 82/307 (26%), Positives = 139/307 (45%), Gaps = 70/307 (22%) Query: 338 HTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQ----ERQQQLIVMEERAT 393 T + + +A L G L ++ LV + A +AL+ Q E+ +Q V+EER Sbjct: 174 ETSFFVFMAMLFAGYSLFA-----LEVLVRESQARMALESTQRKLEEKSRQAGVLEERQR 228 Query: 394 IARELHDSIAQSLSCMKMQVSCLQM---------------------QGDAL--PESSREL 430 +ARE+HD++AQ+ + + M + + G+AL P+S L Sbjct: 229 LAREIHDTLAQNFTSIVMHLEAAEAAITGELTPVAAGRAESLVSPQSGEALVSPQSGEAL 288 Query: 431 LS---------------------QIRNELNASWAQLRELLTTFRLQLTEPGLRP------ 463 +S Q+R L+ + A RE L+ R + LRP Sbjct: 289 VSPRSGVEPPPGRSLTSESGSLNQVRAYLDQARATAREGLSEARRMVW--ALRPEVLEGA 346 Query: 464 ----ALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQA--IHLLQIAREALSNALKHSQAS 517 ALE + ++ + G V+ ++ L P H A + LL++ +EAL+N KH+QA Sbjct: 347 SLPQALERVAQRWAEESG--VRTEFTLTGEPQPLHPALEVALLRVTQEALANVRKHAQAR 404 Query: 518 EVVVTVAQNDNQVKLTVQDNGCGVPENAIR-SNHYGMIIMRDRAQSLRGDCRVRRRESGG 576 V +T++ D+ V L +QD+G G+ A + +G+ +R+R ++L G C + G Sbjct: 405 RVNLTLSYLDDLVLLDIQDDGVGLQTGAPSMTGGFGLRSIRERVEALGGYCAIESERGVG 464 Query: 577 TEVVVTF 583 T V V+ Sbjct: 465 TTVAVSL 471 >UniRef50_B1HRK4 Sensor protein n=2 Tax=Bacillaceae RepID=B1HRK4_LYSSC Length = 346 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 19/213 (8%) Query: 387 VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLR 446 ++ ER +ARELHDS++Q L M +S L + D S L Q+ + + ++R Sbjct: 139 IVAERQRLARELHDSVSQQLFAASMLLSAL-TESDENATS----LKQVEKIVQQAQLEMR 193 Query: 447 ELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 LL R + L L LE E K F + +Y+L + + HL +IA+E Sbjct: 194 ALLLHLRPVALRNKTLAQGLEELIIELQQKVYFHI--EYELEEMALTKAEEDHLFRIAQE 251 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRG 565 ALSN L+H++ASEV + + D+ L +QDNG G A +S YG+ + +RA Sbjct: 252 ALSNTLRHAKASEVELLLVARDDLAILRIQDNGLGFDVEADKSTSYGLQNIAERA----- 306 Query: 566 DCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE 598 E G T +V+ E T +V+ H+ Sbjct: 307 ------VEIGCTYKIVSVPEEGTIVEVKIPLHK 333 >UniRef50_A6TSW3 Histidine kinase n=2 Tax=Alkaliphilus RepID=A6TSW3_ALKMQ Length = 392 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 103/201 (51%), Gaps = 10/201 (4%) Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLREL 448 EER +ARE+HD AQSL+ + ++ + D E SRE + ++ L +R++ Sbjct: 184 EERHRVAREIHDGPAQSLANVVIKAEICEKLMDIDLEKSREEIQNLKKILRDGIKDIRKI 243 Query: 449 LTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 + R + L + GL P L+ E + + + L+ + S + + + +I +EAL Sbjct: 244 IYNLRPMSLDDIGLIPTLKRYVETFEEETQINMILNILSEDPIKDSIKNLSIFRIIQEAL 303 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG-------VPENAIRSNHYGMIIMRDRA 560 +N KH++A+ + + + ++L VQDNG G VP+N +G++ M++R Sbjct: 304 NNVRKHARATNINIKIEITQTDIRLHVQDNGIGFDTENIKVPQNY--EGGFGLLNMKERV 361 Query: 561 QSLRGDCRVRRRESGGTEVVV 581 L G ++ + + GT++++ Sbjct: 362 GLLDGKINIKSKINQGTKLMI 382 >UniRef50_Q9KAS3 Two-component sensor histidine kinase n=1 Tax=Bacillus halodurans RepID=Q9KAS3_BACHD Length = 478 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/232 (26%), Positives = 116/232 (50%), Gaps = 10/232 (4%) Query: 354 LSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQV 413 S + +L++ + L + +R QE +++ +ER +A++LHDS+ Q L + + Sbjct: 250 FSKIEAKLIERIANHLALFIERERLQEVATDVLISQERQRLAQDLHDSVNQLLFSIGLTA 309 Query: 414 SCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYS 473 + + A ++ ++ L+ I+ + + ++R L+ QL GL L + E Y+ Sbjct: 310 KGAEQR--AKDDTLKKPLAMIQQLSSEAMVEMRHLI----WQLRPLGLEKGLIFAIETYA 363 Query: 474 AKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLT 533 + PV R + + L I +EAL+N KH+ S+VVV + +N ++ Sbjct: 364 GQIQLPVSFSSCEVIRWSKAKEDA-LFPIVQEALNNCKKHANPSDVVVHMYKNRGTGIIS 422 Query: 534 VQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 +QD+GCG+ E + +GM M++RA+ + G VR + GT V+ +P Sbjct: 423 IQDDGCGIKET--NAEGFGMKHMKERAKQIGGMIHVRSQPGEGT-VISIHVP 471 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AFA3 Nitrate/nitrite sensor protein narX n=127 Tax=Ga... 735 0.0 UniRef50_B4TXT2 Nitrate/nitrite sensor protein NarX n=69 Tax=Ent... 705 0.0 UniRef50_A4TJU9 Nitrate/nitrite sensor protein n=29 Tax=Enteroba... 529 e-149 UniRef50_B4EWG1 Nitrate/nitrite teo-component system, sensor kin... 527 e-148 UniRef50_B2Q6G3 Putative uncharacterized protein n=3 Tax=Enterob... 517 e-145 UniRef50_Q0HUB7 Signal transduction histidine kinase, nitrate/ni... 496 e-139 UniRef50_A4VHY8 Two-component sensor NarX n=3 Tax=Pseudomonas Re... 475 e-132 UniRef50_Q0A9X9 Signal transduction histidine kinase, nitrate/ni... 475 e-132 UniRef50_Q2SF45 Signal transduction histidine kinase, nitrate/ni... 470 e-131 UniRef50_A1U593 Integral membrane sensor signal transduction his... 467 e-130 UniRef50_A6D1I3 Signal transduction histidine kinase, nitrate/ni... 462 e-128 UniRef50_Q3SJ17 Periplasmic Sensor Signal Transduction Histidine... 459 e-127 UniRef50_B7UUR7 Two-component sensor NarX n=7 Tax=Gammaproteobac... 457 e-127 UniRef50_Q8VUK2 Putative nitrate/nitrite sensor protein n=1 Tax=... 456 e-127 UniRef50_B4S080 Signal transduction histidine kinase, nitrate/ni... 449 e-124 UniRef50_C7RBW7 Histidine kinase n=1 Tax=Kangiella koreensis DSM... 443 e-122 UniRef50_Q9F0Y0 Nitrate/nitrite sensor protein n=1 Tax=Pseudomon... 441 e-122 UniRef50_Q5QWJ9 Nitrate/nitrite sensor histidine kinase n=1 Tax=... 440 e-122 UniRef50_D0IAW0 Nitrate/nitrite sensor protein n=3 Tax=Gammaprot... 437 e-121 UniRef50_A7JYP2 Histidine kinase domain protein n=7 Tax=Vibrio R... 435 e-120 UniRef50_Q5E3J3 Sensory histidine kinase in two-component regula... 431 e-119 UniRef50_Q7NV12 Transmembrane nitrate/nitrite sensor kinase tran... 430 e-119 UniRef50_Q5NYZ8 Nitrate/nitrite sensor kinase n=1 Tax=Aromatoleu... 429 e-118 UniRef50_Q5P3L3 Nitrate/nitrite TWO-component sensor NARX n=1 Ta... 428 e-118 UniRef50_Q47HU2 GAF:ATP-binding region, ATPase-like:Histidine ki... 428 e-118 UniRef50_P27896 Nitrate/nitrite sensor protein narQ n=113 Tax=En... 423 e-117 UniRef50_A4G5M3 Putative Nitrate/nitrite sensor protein narX n=1... 423 e-117 UniRef50_A8FUN8 Two-component sensor NarX n=3 Tax=Shewanella Rep... 423 e-116 UniRef50_C4GHV1 Putative uncharacterized protein n=1 Tax=Kingell... 421 e-116 UniRef50_C5S0V3 Nitrate/nitrite sensor protein NarQ n=6 Tax=Gamm... 419 e-115 UniRef50_C0DXB9 Putative uncharacterized protein n=1 Tax=Eikenel... 415 e-114 UniRef50_A5EZZ3 Nitrate/nitrite sensor protein NarQ n=51 Tax=Vib... 414 e-114 UniRef50_Q2C653 Hypothetical nitrate/nitrite sensor protein NarQ... 413 e-114 UniRef50_Q4FU45 Signal transduction histidine kinase sensor n=2 ... 410 e-113 UniRef50_A8GHJ7 Integral membrane sensor signal transduction his... 410 e-113 UniRef50_C7I506 GAF sensor signal transduction histidine kinase ... 408 e-112 UniRef50_A2SGG0 Signal transduction histidine kinase, nitrate/ni... 407 e-112 UniRef50_B4RLW4 NarX/NarQ n=17 Tax=Neisseria RepID=B4RLW4_NEIG2 405 e-111 UniRef50_C4KA07 GAF sensor signal transduction histidine kinase ... 405 e-111 UniRef50_Q46R21 GAF:ATP-binding region, ATPase-like:Histidine ki... 404 e-111 UniRef50_C1D9F9 NarX n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 403 e-111 UniRef50_B9Z081 Multi-sensor signal transduction histidine kinas... 398 e-109 UniRef50_P44604 Sensor protein narQ homolog n=30 Tax=Gammaproteo... 397 e-109 UniRef50_C4K985 Histidine kinase n=1 Tax=Thauera sp. MZ1T RepID=... 395 e-108 UniRef50_A0KIL7 Nitrate/nitrite sensor histidine kinase NarQ n=2... 394 e-108 UniRef50_C5T4I9 GAF sensor signal transduction histidine kinase ... 391 e-107 UniRef50_B8EB80 Histidine kinase n=20 Tax=Shewanella RepID=B8EB8... 390 e-106 UniRef50_A1W358 Signal transduction histidine kinase, nitrate/ni... 388 e-106 UniRef50_A6FC55 Hypothetical nitrate/nitrite sensor protein NarQ... 384 e-105 UniRef50_A9LZC9 Two-component system, NarL family, nitrate/nitri... 384 e-105 UniRef50_A5WD78 Integral membrane sensor signal transduction his... 382 e-104 UniRef50_A4BGQ5 Signal transduction histidine kinase, nitrate/ni... 381 e-104 UniRef50_C0DXM5 Sensor protein n=1 Tax=Eikenella corrodens ATCC ... 343 1e-92 UniRef50_B2CI54 Integral membrane sensor signal transduction his... 340 1e-91 UniRef50_Q1ZGB4 Nitrate/nitrite sensor protein n=1 Tax=Psychromo... 339 1e-91 UniRef50_B8GUD0 GAF sensor signal transduction histidine kinase ... 315 3e-84 UniRef50_Q2Y9N2 Periplasmic sensor signal transduction histidine... 309 3e-82 UniRef50_D1UN54 PAS/PAC sensor signal transduction histidine kin... 289 2e-76 UniRef50_C0N6H4 Putative uncharacterized protein n=1 Tax=Methylo... 279 2e-73 UniRef50_Q7N5B4 Similar to nitrate/nitrite sensor protein NarX n... 273 1e-71 UniRef50_B2AKD3 Putative multi-sensor signal transduction histid... 270 1e-70 UniRef50_Q67S65 Two-component sensor histidine kinase n=1 Tax=Sy... 263 1e-68 UniRef50_Q7NE94 Glr3986 protein n=1 Tax=Gloeobacter violaceus Re... 258 5e-67 UniRef50_C0N1R0 Histidine kinase domain protein n=1 Tax=Methylop... 256 1e-66 UniRef50_C5SBA0 Histidine kinase n=1 Tax=Allochromatium vinosum ... 252 2e-65 UniRef50_A9WFF8 Histidine kinase dimerisation and phosphoaccepto... 252 3e-65 UniRef50_A1AXR2 Signal transduction histidine kinase, nitrate/ni... 252 3e-65 UniRef50_D1C419 Histidine kinase n=1 Tax=Sphaerobacter thermophi... 249 2e-64 UniRef50_B0C7C8 GAF domain protein n=1 Tax=Acaryochloris marina ... 247 7e-64 UniRef50_Q67RQ8 Two-component system sensor kinase n=1 Tax=Symbi... 247 7e-64 UniRef50_Q1H473 Signal transduction histidine kinase, nitrate/ni... 247 8e-64 UniRef50_B9LCJ4 GAF sensor signal transduction histidine kinase ... 247 8e-64 UniRef50_Q1AZP1 Periplasmic sensor signal transduction histidine... 245 4e-63 UniRef50_C6QH09 Histidine kinase n=1 Tax=Hyphomicrobium denitrif... 244 6e-63 UniRef50_B2JVQ4 Integral membrane sensor signal transduction his... 244 7e-63 UniRef50_Q1ASU9 GAF sensor signal transduction histidine kinase ... 242 4e-62 UniRef50_B4WPC3 GAF domain protein n=1 Tax=Synechococcus sp. PCC... 241 5e-62 UniRef50_A5UUR7 Multi-sensor signal transduction histidine kinas... 241 5e-62 UniRef50_Q1H0K4 Multi-sensor signal transduction histidine kinas... 241 7e-62 UniRef50_Q1IXN3 Periplasmic sensor signal transduction histidine... 240 1e-61 UniRef50_Q74GJ3 Sensory box histidine kinase n=1 Tax=Geobacter s... 238 4e-61 UniRef50_Q025Z0 Histidine kinase n=1 Tax=Candidatus Solibacter u... 238 6e-61 UniRef50_C6XAG1 Histidine kinase n=1 Tax=Methylovorus sp. SIP3-4... 238 6e-61 UniRef50_A9B1S5 Multi-sensor signal transduction histidine kinas... 237 1e-60 UniRef50_B9XNW0 Multi-sensor signal transduction histidine kinas... 236 1e-60 UniRef50_C6CGT0 PAS/PAC sensor signal transduction histidine kin... 236 1e-60 UniRef50_B2TAX2 PAS/PAC sensor signal transduction histidine kin... 236 2e-60 UniRef50_D1C6S2 Histidine kinase n=1 Tax=Sphaerobacter thermophi... 236 2e-60 UniRef50_B8HT67 GAF sensor signal transduction histidine kinase ... 236 2e-60 UniRef50_D1C657 GAF sensor signal transduction histidine kinase ... 234 6e-60 UniRef50_D1C9Z9 GAF sensor signal transduction histidine kinase ... 233 2e-59 UniRef50_UPI0001746019 hypothetical protein VspiD_01665 n=1 Tax=... 233 2e-59 UniRef50_C1CWD4 Putative histidine kinase, classic; putative mem... 232 4e-59 UniRef50_A6SWF1 Sensory box histidine kinase n=1 Tax=Janthinobac... 231 5e-59 UniRef50_B8CZJ7 Integral membrane sensor signal transduction his... 231 5e-59 UniRef50_B9L060 Putative two component system histidine kinase n... 230 8e-59 UniRef50_D1CB59 GAF sensor signal transduction histidine kinase ... 230 9e-59 UniRef50_A3DEX1 Histidine kinase n=5 Tax=Clostridium RepID=A3DEX... 229 2e-58 UniRef50_B7AAT7 Histidine kinase n=1 Tax=Thermus aquaticus Y51MC... 229 2e-58 UniRef50_B2T8J5 Multi-sensor signal transduction histidine kinas... 229 2e-58 UniRef50_A9B5L1 Integral membrane sensor signal transduction his... 229 3e-58 UniRef50_A6CIM0 Multi-sensor signal transduction histidine kinas... 229 3e-58 UniRef50_B2VGC1 HrpX protein (Hrp cluster) n=6 Tax=Enterobacteri... 229 3e-58 UniRef50_B6JD37 Signal transduction histidine kinase containing ... 229 4e-58 UniRef50_C4DRB4 Signal transduction histidine kinase, COG4585 n=... 227 9e-58 UniRef50_Q0A821 Signal transduction histidine kinase, nitrate/ni... 227 1e-57 UniRef50_D1CE67 Multi-sensor signal transduction histidine kinas... 227 1e-57 UniRef50_B4WQU2 GAF domain protein n=1 Tax=Synechococcus sp. PCC... 227 1e-57 UniRef50_A0R9R9 Possible sensor histidine kinase domain n=36 Tax... 227 1e-57 UniRef50_C5AIA0 Multi-sensor signal transduction histidine kinas... 227 1e-57 UniRef50_A5FQK5 Multi-sensor signal transduction histidine kinas... 226 2e-57 UniRef50_C1F9F5 Two component regulator propeller/histidine kina... 226 2e-57 UniRef50_O32198 Sensor histidine kinase liaS n=5 Tax=Bacillus Re... 225 3e-57 UniRef50_Q3M1D8 Serine/threonine protein kinase and signal trans... 225 3e-57 UniRef50_Q81FX4 Two-component sensor protein yvqE n=44 Tax=Bacil... 225 5e-57 UniRef50_Q3SG40 GAF Sensor Signal Transduction Histidine Kinase ... 225 5e-57 UniRef50_B1ZR83 Integral membrane sensor signal transduction his... 225 5e-57 UniRef50_Q2SUK5 Two-component hybrid sensor and regulator n=33 T... 224 9e-57 UniRef50_C1XTQ5 PAS domain S-box protein n=1 Tax=Meiothermus sil... 224 9e-57 UniRef50_Q1IWU8 Multi-sensor signal transduction histidine kinas... 222 2e-56 UniRef50_Q5SJ33 Sensor histidine kinase n=3 Tax=Thermus RepID=Q5... 222 3e-56 UniRef50_A6SXZ6 Two-component sensor histidine kinase n=2 Tax=Ox... 222 3e-56 UniRef50_C1XM57 Signal transduction histidine kinase, COG4585 n=... 222 3e-56 UniRef50_B5I2X6 Two-component system sensor kinase n=10 Tax=Stre... 222 3e-56 UniRef50_D2B7Q9 Histidine kinase n=1 Tax=Streptosporangium roseu... 222 4e-56 UniRef50_Q1AVR5 Periplasmic sensor signal transduction histidine... 220 8e-56 UniRef50_Q814L6 Two-component sensor protein yhcY n=40 Tax=Bacil... 220 1e-55 UniRef50_Q47G83 PAS n=1 Tax=Dechloromonas aromatica RCB RepID=Q4... 220 1e-55 UniRef50_C3B362 Two-component sensor protein yhcY n=4 Tax=Bacill... 220 1e-55 UniRef50_A7NRQ7 Integral membrane sensor signal transduction his... 220 1e-55 UniRef50_Q2LRG0 Signal transduction histidine kinase n=1 Tax=Syn... 220 1e-55 UniRef50_C8NE28 Sensor histidine kinase n=1 Tax=Granulicatella a... 220 1e-55 UniRef50_Q2B2D2 Two-component sensor histidine kinase n=2 Tax=Ba... 220 2e-55 UniRef50_C1YIX9 Signal transduction histidine kinase, COG4585 n=... 219 2e-55 UniRef50_Q0KDJ4 Signal transduction histidine kinase containing ... 219 2e-55 UniRef50_UPI0001C312DE integral membrane sensor signal transduct... 218 4e-55 UniRef50_C5UZV3 PAS/PAC sensor signal transduction histidine kin... 218 5e-55 UniRef50_B9TKD1 Putative uncharacterized protein (Fragment) n=1 ... 218 5e-55 UniRef50_A9B046 Integral membrane sensor signal transduction his... 217 7e-55 UniRef50_B8D0J3 Histidine kinase n=2 Tax=Clostridia RepID=B8D0J3... 217 8e-55 UniRef50_C9NJB7 GAF sensor signal transduction histidine kinase ... 217 1e-54 UniRef50_Q5HN87 Sensor histidine kinase n=64 Tax=Staphylococcace... 217 1e-54 UniRef50_Q1D524 Sensor histidine kinase n=2 Tax=Cystobacterineae... 217 1e-54 UniRef50_C5V7S2 PAS/PAC sensor signal transduction histidine kin... 217 1e-54 UniRef50_B4CYV7 Histidine kinase n=1 Tax=Chthoniobacter flavus E... 216 2e-54 UniRef50_B4D6U9 Multi-sensor signal transduction histidine kinas... 216 2e-54 UniRef50_Q0AF09 Multi-sensor signal transduction histidine kinas... 216 2e-54 UniRef50_Q0B944 Multi-sensor signal transduction histidine kinas... 216 2e-54 UniRef50_C6XAR1 PAS/PAC sensor signal transduction histidine kin... 215 3e-54 UniRef50_C6NZS6 Multi-sensor signal transduction histidine kinas... 215 3e-54 UniRef50_B9XSJ3 Multi-sensor signal transduction histidine kinas... 215 4e-54 UniRef50_Q8YV44 Two-component sensor histidine kinase n=3 Tax=Cy... 215 5e-54 UniRef50_D2BHE9 Sensor histidine kinase n=5 Tax=Dehalococcoides ... 215 5e-54 UniRef50_UPI00017449FC GAF domain protein n=1 Tax=Verrucomicrobi... 214 7e-54 UniRef50_C1XJE4 Histidine kinase n=2 Tax=Meiothermus RepID=C1XJE... 214 8e-54 UniRef50_B4UAL2 Integral membrane sensor signal transduction his... 214 9e-54 UniRef50_C6J7D3 ATP-binding region ATPase domain-containing prot... 214 9e-54 UniRef50_B9XSI9 Multi-sensor signal transduction histidine kinas... 214 9e-54 UniRef50_B3U4S0 Response regulator receiver n=1 Tax=Candidatus N... 214 1e-53 UniRef50_C5C2U0 Histidine kinase n=2 Tax=Actinomycetales RepID=C... 214 1e-53 UniRef50_B4D5C3 Histidine kinase n=1 Tax=Chthoniobacter flavus E... 214 1e-53 UniRef50_A4XZI6 Multi-sensor signal transduction histidine kinas... 213 1e-53 UniRef50_B1Z4G8 Multi-sensor signal transduction histidine kinas... 213 1e-53 UniRef50_C7MRK1 PAS domain S-box n=1 Tax=Saccharomonospora virid... 213 1e-53 UniRef50_Q13H12 PAS/PAC sensor signal transduction histidine kin... 213 2e-53 UniRef50_D2SEJ2 Integral membrane sensor signal transduction his... 213 2e-53 UniRef50_C8WYI2 Histidine kinase n=2 Tax=Alicyclobacillus acidoc... 212 3e-53 UniRef50_UPI0001B54039 histidine kinase n=1 Tax=Streptomyces sp.... 212 3e-53 UniRef50_B7IV98 Sensor histidine kinase n=76 Tax=Bacillales RepI... 212 4e-53 UniRef50_B5JKT1 Histidine kinase domain protein n=1 Tax=Verrucom... 212 4e-53 UniRef50_C6P6J2 PAS/PAC sensor signal transduction histidine kin... 212 4e-53 UniRef50_B5HYF1 Two-component system sensor kinase n=10 Tax=Stre... 212 5e-53 UniRef50_C3PKA7 Two-component system sensor kinase n=2 Tax=Coryn... 211 5e-53 UniRef50_C2C0V0 Possible histidine kinase n=5 Tax=Listeria RepID... 211 5e-53 UniRef50_B0K3K4 Histidine kinase n=11 Tax=Thermoanaerobacterales... 211 5e-53 UniRef50_C0XNJ5 Two component system histidine kinase n=1 Tax=Co... 211 7e-53 UniRef50_Q01NC5 Integral membrane sensor signal transduction his... 210 8e-53 UniRef50_UPI00016AFAA4 response regulator/sensory box histidine ... 210 1e-52 UniRef50_Q5NZX5 Putative sensory protein, two-component system n... 210 1e-52 UniRef50_UPI00017893B7 integral membrane sensor signal transduct... 210 1e-52 UniRef50_B4D809 Histidine kinase n=1 Tax=Chthoniobacter flavus E... 210 1e-52 UniRef50_B4D2I1 Histidine kinase n=1 Tax=Chthoniobacter flavus E... 210 1e-52 UniRef50_B2UDW5 Multi-sensor signal transduction histidine kinas... 210 1e-52 UniRef50_C0VWJ7 Two-component sensory kinase n=2 Tax=Corynebacte... 210 1e-52 UniRef50_D0BKY9 Sensor histidine kinase VraS n=1 Tax=Granulicate... 210 1e-52 UniRef50_UPI000169369A sensor histidine kinase n=1 Tax=Paenibaci... 210 1e-52 UniRef50_B1YJQ1 Integral membrane sensor signal transduction his... 209 2e-52 UniRef50_UPI0001693FB4 two-component sensor histidine kinase of ... 209 2e-52 UniRef50_UPI00017468E2 histidine kinase n=1 Tax=Verrucomicrobium... 209 2e-52 UniRef50_Q9KDL3 Two-component sensor histidine kinase n=1 Tax=Ba... 209 2e-52 UniRef50_B2JH43 PAS/PAC sensor signal transduction histidine kin... 209 2e-52 UniRef50_C9RWH5 Integral membrane sensor signal transduction his... 209 3e-52 UniRef50_A8LRP9 Integral membrane sensor signal transduction his... 209 3e-52 UniRef50_C6J152 Histidine kinase dimerization and phosphoaccepto... 209 3e-52 UniRef50_A6GSY8 Sensory transduction histidine kinase n=1 Tax=Li... 209 3e-52 UniRef50_B4CV46 Integral membrane sensor signal transduction his... 209 4e-52 UniRef50_C6WV68 PAS/PAC sensor signal transduction histidine kin... 209 4e-52 UniRef50_C7MZN7 PAS domain S-box n=1 Tax=Saccharomonospora virid... 208 5e-52 UniRef50_Q47FQ9 Response regulator receiver:ATP-binding region, ... 208 5e-52 UniRef50_Q0S8Z4 Sensor kinase, two-component system n=2 Tax=Rhod... 208 6e-52 UniRef50_Q67L27 Two-component sensor histidine kinase n=1 Tax=Sy... 208 7e-52 UniRef50_C6CVS1 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 207 7e-52 UniRef50_B2TG29 PAS/PAC sensor signal transduction histidine kin... 207 7e-52 UniRef50_B2GCM4 Two-component sensor histidine kinase n=8 Tax=La... 207 8e-52 UniRef50_Q4ZMH3 PAS n=6 Tax=Pseudomonas RepID=Q4ZMH3_PSEU2 207 8e-52 UniRef50_UPI0001B502C8 two-component sensor, putative n=1 Tax=St... 207 8e-52 UniRef50_A1AUQ4 PAS/PAC sensor signal transduction histidine kin... 207 8e-52 UniRef50_D2B2V1 Histidine kinase n=1 Tax=Streptosporangium roseu... 207 9e-52 UniRef50_C0Z627 Two-component sensor histidine kinase n=3 Tax=Ba... 207 1e-51 UniRef50_UPI00016987BE Periplasmic Sensor Signal Transduction Hi... 207 1e-51 UniRef50_A1HRV6 Integral membrane sensor signal transduction his... 207 1e-51 UniRef50_C7QZV7 Histidine kinase n=3 Tax=Micrococcineae RepID=C7... 207 1e-51 UniRef50_B5JIM7 ATPase, histidine kinase-, DNA gyrase B-, and HS... 207 1e-51 UniRef50_UPI0001B561AB two-component system sensor kinase n=1 Ta... 207 1e-51 UniRef50_B5VVU4 Integral membrane sensor signal transduction his... 207 1e-51 UniRef50_C5AKB3 Sensory box histidine kinase n=1 Tax=Burkholderi... 207 1e-51 UniRef50_A1WYG6 Histidine kinase n=1 Tax=Halorhodospira halophil... 207 1e-51 UniRef50_C3XBQ9 DNA-binding response regulator n=2 Tax=Oxalobact... 207 1e-51 UniRef50_C0GH42 Multi-sensor signal transduction histidine kinas... 206 2e-51 UniRef50_C1XS12 Histidine kinase with GAF domain n=1 Tax=Meiothe... 206 2e-51 UniRef50_A9AW12 Multi-sensor signal transduction histidine kinas... 206 2e-51 UniRef50_Q5WCK2 Two-component sensor histidine kinase n=1 Tax=Ba... 206 2e-51 UniRef50_Q5P5H6 Two-component sensor n=1 Tax=Aromatoleum aromati... 206 2e-51 UniRef50_A3NKQ6 Signal transduction histidine kinase n=29 Tax=Bu... 206 2e-51 UniRef50_C4DC51 Histidine kinase with GAF domain n=2 Tax=Actinom... 205 3e-51 Sequences not found previously or not previously below threshold: UniRef50_A8VTE1 Short-chain dehydrogenase/reductase SDR n=1 Tax=... 252 2e-65 UniRef50_Q67MG9 Sensor protein n=1 Tax=Symbiobacterium thermophi... 229 2e-58 UniRef50_B8G147 Multi-sensor signal transduction histidine kinas... 227 1e-57 UniRef50_Q1CZ92 Sensor histidine kinase n=1 Tax=Myxococcus xanth... 221 6e-56 UniRef50_C6BTX2 GAF sensor signal transduction histidine kinase ... 219 2e-55 UniRef50_Q3SJC2 Multi-sensor Signal Transduction Histidine Kinas... 218 6e-55 UniRef50_B8FFK0 PAS/PAC sensor signal transduction histidine kin... 217 9e-55 UniRef50_C0ZJS5 Two-component sensor histidine kinase n=1 Tax=Br... 215 3e-54 UniRef50_A7NG30 Multi-sensor signal transduction histidine kinas... 214 6e-54 UniRef50_D1CAA4 GAF sensor signal transduction histidine kinase ... 214 1e-53 UniRef50_C0Q8Z0 Two-component hybrid sensor and response regulat... 213 2e-53 UniRef50_B4D830 Integral membrane sensor signal transduction his... 212 3e-53 UniRef50_Q45827 Uncharacterized sensor-like histidine kinase Cau... 211 6e-53 UniRef50_D1VK31 Histidine kinase n=1 Tax=Frankia sp. EuI1c RepID... 210 1e-52 UniRef50_A5GBT2 Integral membrane sensor signal transduction his... 210 1e-52 UniRef50_C4XMF3 Two-component sensor histidine kinase n=1 Tax=De... 210 1e-52 UniRef50_B4WLR8 GAF domain protein n=1 Tax=Synechococcus sp. PCC... 209 2e-52 UniRef50_Q67QY8 Two-component sensor histidine kinase n=1 Tax=Sy... 209 3e-52 UniRef50_A6WW19 Integral membrane sensor signal transduction his... 209 3e-52 UniRef50_B8G136 Sensor protein n=1 Tax=Desulfitobacterium hafnie... 208 4e-52 UniRef50_UPI0001B54FA0 histidine kinase n=1 Tax=Streptomyces sp.... 208 5e-52 UniRef50_B8G173 Histidine kinase n=2 Tax=Desulfitobacterium hafn... 207 1e-51 UniRef50_B2J8J6 Multi-sensor signal transduction histidine kinas... 207 1e-51 UniRef50_A9B363 Integral membrane sensor signal transduction his... 207 1e-51 UniRef50_D0WS36 Putative signal transduction histidine kinase n=... 206 2e-51 >UniRef50_P0AFA3 Nitrate/nitrite sensor protein narX n=127 Tax=Gammaproteobacteria RepID=NARX_ECO57 Length = 598 Score = 735 bits (1899), Expect = 0.0, Method: Composition-based stats. Identities = 598/598 (100%), Positives = 598/598 (100%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL Sbjct: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 Query: 61 LAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNR 120 LAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNR Sbjct: 61 LAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNR 120 Query: 121 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ 180 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ Sbjct: 121 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ 180 Query: 181 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG Sbjct: 181 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF 300 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF Sbjct: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF 300 Query: 301 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ 360 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ Sbjct: 301 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ 360 Query: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG Sbjct: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 Query: 421 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV 480 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV Sbjct: 421 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV 480 Query: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG 540 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG Sbjct: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG 540 Query: 541 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE 598 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE Sbjct: 541 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE 598 >UniRef50_B4TXT2 Nitrate/nitrite sensor protein NarX n=69 Tax=Enterobacteriaceae RepID=B4TXT2_SALSV Length = 598 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 514/598 (85%), Positives = 543/598 (90%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 M KRC SPLTLVNQ+ALIV+LSTAIG+AGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL Sbjct: 1 MFKRCFSPLTLVNQLALIVMLSTAIGVAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 Query: 61 LAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNR 120 LAAVPL KD+ L+ EMEQTAFS ELTRAAERDGQ QL+ LQDYW NEL P L AQN Sbjct: 61 LAAVPLDAKDQKLLDEMEQTAFSPELTRAAERDGQQKQLKALQDYWHNELSPGLQHAQNA 120 Query: 121 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ 180 V+ DV++FVAGLD+LV+ FD TTE+RIE VVLVHRVMA+FMALLLVFTIIWLR RLLQ Sbjct: 121 HAVAEDVTRFVAGLDRLVTSFDHTTELRIERVVLVHRVMAIFMALLLVFTIIWLRVRLLQ 180 Query: 181 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 PW+QLL+MA AVS RDFTQRANISGRNEMA LG+ALNNMS ELAESYAVLEQRVQEKTAG Sbjct: 181 PWKQLLSMARAVSQRDFTQRANISGRNEMAALGSALNNMSEELAESYAVLEQRVQEKTAG 240 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF 300 LEHKNQILSFLWQANRRLHS APLCERLSPVLNGLQNLT L DIELRVYD +DE+NHQEF Sbjct: 241 LEHKNQILSFLWQANRRLHSPAPLCERLSPVLNGLQNLTQLHDIELRVYDLEDEDNHQEF 300 Query: 301 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ 360 TCQ D++CDDKGC LCPR LP+ + GTTLKWRL DSHTQYGILLATLP GRHLSHDQQQ Sbjct: 301 TCQSDISCDDKGCHLCPRSALPMINGGTTLKWRLTDSHTQYGILLATLPYGRHLSHDQQQ 360 Query: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG Sbjct: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 Query: 421 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV 480 D LPESSR LLSQIRNELN SWAQLRELLTTFRLQLTEPGLRPALEASC+E+SA+FGF V Sbjct: 421 DVLPESSRVLLSQIRNELNCSWAQLRELLTTFRLQLTEPGLRPALEASCQEFSARFGFTV 480 Query: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG 540 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHS A +VVVTV Q QVKL VQDNGCG Sbjct: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSHADDVVVTVTQCGKQVKLKVQDNGCG 540 Query: 541 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE 598 VPENA RSNHYGMIIMRDRAQSLRGDC+VRRRE+GGTEV VTFIPE FT+ QGDTHE Sbjct: 541 VPENAERSNHYGMIIMRDRAQSLRGDCQVRRRETGGTEVTVTFIPETNFTETQGDTHE 598 >UniRef50_A4TJU9 Nitrate/nitrite sensor protein n=29 Tax=Enterobacteriaceae RepID=A4TJU9_YERPP Length = 593 Score = 529 bits (1364), Expect = e-149, Method: Composition-based stats. Identities = 284/595 (47%), Positives = 395/595 (66%), Gaps = 7/595 (1%) Query: 2 LKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLL 61 +KR L+P LVNQ+AL+++L +GLAGM +S W+ Q +QG+AHAIN+AGSLRMQSYRLL Sbjct: 1 MKRYLTP--LVNQIALLMILLGMLGLAGMVISSWMAQSIQGNAHAINQAGSLRMQSYRLL 58 Query: 62 AAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRE 121 + +PL + + +EQ S +L +A R+G + Q Q ++ YW++ L P L +A++ + Sbjct: 59 SMIPLDSNELSYLVALEQDKTSHDLQQALLREGLMGQYQQIERYWQDTLKPQLQQAKHPD 118 Query: 122 TVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQP 181 V+A V+ FV LD LV D TE R+ V L+ V ++ LL+ I +LR RLL+P Sbjct: 119 EVAASVADFVHQLDALVLAIDHKTEQRLLQVTLIPLVFSLLTLSLLLAMIYYLRRRLLRP 178 Query: 182 WRQLLAMASAVSHRDFTQRANISG-RNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 W +L++MA+A+ DF+QR + R+EM MLGTALN MS EL+ Y LEQRV KTA Sbjct: 179 WLKLISMANAIGRGDFSQRYTLDYQRDEMGMLGTALNRMSQELSLIYGDLEQRVVNKTAD 238 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF 300 L+ KNQ+L+FL+ ++R+LH+ PL ERL+PV+ LQ LT L ++++ +Y+ +H Sbjct: 239 LQQKNQVLAFLYHSSRQLHTHQPLSERLAPVIEQLQALTTLENVQICLYENHLYRDHVNH 298 Query: 301 TCQPD--MTCDDKGCQLCPRGVLPVG--DRGTTLKWRLADSHTQYGILLATLPQGRHLSH 356 + M + V P+ + +L W L+D QYG+LLA P L+ Sbjct: 299 NADAEYLMPKNRPASLTISGPVRPISHPELWQSLSWSLSDKLGQYGLLLAKQPLDNPLNS 358 Query: 357 DQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL 416 DQQQLVD LVEQLT+TLAL+ + QQQL++MEER+ IARELHDSIAQSLSC+K+Q+SCL Sbjct: 359 DQQQLVDMLVEQLTSTLALESQAKHQQQLLLMEERSAIARELHDSIAQSLSCLKIQISCL 418 Query: 417 QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKF 476 QMQ LPE+S L+ Q+R+ELN ++ QLRELLTTFRL+L E L AL+A E+S + Sbjct: 419 QMQTPDLPENSNLLIKQMRDELNIAYRQLRELLTTFRLKLNEATLEAALQALVNEFSERA 478 Query: 477 GFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQD 536 G + YQLPP VP+HQAIH++ I REAL+N KH++ASE V V V +++ D Sbjct: 479 GLSITFKYQLPPDQVPNHQAIHMVNIVREALNNIYKHARASEATVNVHLEQGDVVMSITD 538 Query: 537 NGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTD 591 NGCG+ + + + NHYG++IM+DRA SL G C + ++E GGTEV V F PE D Sbjct: 539 NGCGIGQASEQPNHYGLMIMQDRANSLHGHCSINQKEGGGTEVRVQFTPENNDLD 593 >UniRef50_B4EWG1 Nitrate/nitrite teo-component system, sensor kinase n=8 Tax=Enterobacteriaceae RepID=B4EWG1_PROMH Length = 609 Score = 527 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 256/590 (43%), Positives = 373/590 (63%), Gaps = 5/590 (0%) Query: 7 SPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPL 66 +++NQ+A+++LL T G+ GMA+S ++ VQG+AHAINK+GSLRMQSYRLL+A+PL Sbjct: 10 YRFSIINQIAILMLLFTLFGVVGMAISNHIILSVQGNAHAINKSGSLRMQSYRLLSALPL 69 Query: 67 SEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSAD 126 +K + ++E+E S EL + +Q L YW+ L P L A+ + Sbjct: 70 DDKHRDYLQELENDLDSKELRQVLSTSSLQSQYVQLTHYWKETLKPTLSAAKQPNDAKQE 129 Query: 127 VSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLL 186 V FV+ LD LVS D+ TE +I V + LLL ++ R RLL PW+QL+ Sbjct: 130 VIFFVSQLDTLVSSIDQLTEQKIRLVAYTQLIFTALTLLLLFGSVWHFRRRLLLPWQQLM 189 Query: 187 AMASAVSHRDFTQRA-NISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKN 245 +MA+++ H DF+ R +E+A LG ALN MS EL+ Y+ LEQRV EKT L+ KN Sbjct: 190 SMANSIGHGDFSTRFRPRPHHDEIATLGIALNTMSEELSTLYSELEQRVIEKTHDLQQKN 249 Query: 246 QILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQP- 304 ++LS+L+ ++++LHS+APLC RL +L LQ++ +++R+Y+ + E + P Sbjct: 250 KVLSYLYHSSQQLHSQAPLCARLRQILAELQHIIPDSYLQIRLYEDNQHTLFNEISLAPS 309 Query: 305 --DMTCDDKGCQLCPRGV-LPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQL 361 C C+ C + L W L D +YG+ + LP+ L+ +Q L Sbjct: 310 SRPEYCPTPDCERCNEDANITTPLNNRLLHWELTDQIHRYGLFVMQLPENSVLTDEQNNL 369 Query: 362 VDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD 421 + L +Q++A LA+++ E+QQQL++M+ER+ IARELHDSIAQSLSC+KMQVS LQMQ + Sbjct: 370 MLLLTKQISAMLAMEQQNEQQQQLLLMDERSAIARELHDSIAQSLSCLKMQVSYLQMQSE 429 Query: 422 ALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVK 481 LP++ ++LL ++R ELN ++ QLRELLTTFRL+LTEPGL ALE + E++ + GF + Sbjct: 430 TLPDNCQKLLKEMREELNVAYRQLRELLTTFRLKLTEPGLLAALENTLNEFNQRLGFAIH 489 Query: 482 LDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV 541 DYQLP + V SHQ+IH++QI REAL+N L+H+ A+ V + N+ V+L + DNG G+ Sbjct: 490 FDYQLPAKCVNSHQSIHVVQIVREALNNILQHANANWAEVALTLNNGIVELQINDNGEGI 549 Query: 542 PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTD 591 N + NHYG+IIMR+RA SL G +R R+ GGT+V VTF T D Sbjct: 550 TPNPEKINHYGLIIMRERANSLNGSYSIRVRKEGGTQVFVTFPLITTHKD 599 >UniRef50_B2Q6G3 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B2Q6G3_PROST Length = 586 Score = 517 bits (1331), Expect = e-145, Method: Composition-based stats. Identities = 251/577 (43%), Positives = 374/577 (64%), Gaps = 5/577 (0%) Query: 8 PLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLS 67 +++NQV ++LL +G+ GM +S ++ VQG+AHAINK+GSLRMQSYRLL+ +PL+ Sbjct: 9 RFSIINQVIGLMLLIAILGIIGMTISNRMIISVQGNAHAINKSGSLRMQSYRLLSLIPLN 68 Query: 68 EKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADV 127 + K + +E S ELT+ + + + L +W L PAL A + +V Sbjct: 69 DHTKEYLDILENDLSSLELTQVVKAEDLTEKFSELHTFWLKTLRPALSEANSASDARYEV 128 Query: 128 SQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLA 187 FV LD+LV D TE +I V + + + LLL+ TI LR ++ PW +LL+ Sbjct: 129 ISFVNMLDELVHDIDEKTERKIAYVAMTQMIFIGLVFLLLMVTIWHLRRKIYYPWMKLLS 188 Query: 188 MASAVSHRDFTQRANISG-RNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQ 246 MA A+ +DF+QR + ++E+ LG LN MS ELA+SY LE RV EKTA L +KN+ Sbjct: 189 MAHAIGQKDFSQRYPNNNKQDELNTLGLTLNQMSDELAQSYHQLESRVAEKTADLRNKNR 248 Query: 247 ILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDM 306 +LS+L+Q+N+ LHS PL RL VL L+N+T L+++ L++Y+ +E+ E C + Sbjct: 249 VLSYLYQSNQILHSTEPLDLRLQKVLGELKNITSLKNLSLKLYEDSNEKYFHEICCTSND 308 Query: 307 TCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLV 366 + P+ ++ TL W L+D+ +YG++ A + +S +Q LV LV Sbjct: 309 PLSE-DPSFIPKDIVH---HPKTLLWELSDNMHRYGVISAEIENNEDISEEQNNLVLMLV 364 Query: 367 EQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPES 426 +Q++ LA++ E+QQQL++M+ER+ IARELHDSIAQSLSC+KMQ+S LQMQ ++LP+ Sbjct: 365 KQISGMLAMEHQIEQQQQLLIMDERSAIARELHDSIAQSLSCLKMQISYLQMQPESLPDK 424 Query: 427 SRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQL 486 ++LLS++R E+N +++QLRELLTTFRL+L EPGL P+LE++ E+S K GF + L+Y + Sbjct: 425 HQQLLSEMRGEINTAYSQLRELLTTFRLKLMEPGLLPSLESTINEFSQKMGFKILLNYHI 484 Query: 487 PPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI 546 P + + HQ+IH++QI REALSN LKH+ A+ VT+ Q+ V +T++DNG G+ Sbjct: 485 PAKSISPHQSIHIIQIIREALSNILKHAHANWAQVTLQQDSGVVTITIEDNGEGIAPTPS 544 Query: 547 RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + NHYG+IIMR+RA SL G+C + R GGT+V VTF Sbjct: 545 KQNHYGLIIMRERALSLNGECEIIPRAQGGTKVQVTF 581 >UniRef50_Q0HUB7 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=2 Tax=Shewanella RepID=Q0HUB7_SHESR Length = 589 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 233/588 (39%), Positives = 351/588 (59%), Gaps = 20/588 (3%) Query: 30 MAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIK-------------E 76 M +S W+ +QGSAHAI++ GS+RM+SYRLL+ +PL + K L+ + Sbjct: 1 MVISSWVSNSLQGSAHAIDEIGSMRMKSYRLLSFLPLENEQKLLLANSPFISKLNIGKNQ 60 Query: 77 MEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQ 136 + + +L ER+ + L YW +L P L+ A+ V FVA LD Sbjct: 61 LNKGEDVVKLKVFLEREDLINDFNDLYQYWNLQLQPTLLSAKTASDARVKVDFFVAKLDN 120 Query: 137 LVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRD 196 LV D TE++++ V VH V LL + +++L+ R+ +PW++LL +A+++S D Sbjct: 121 LVKKIDSNTEVKLKLVSRVHSVFIFLSVLLTIVGVVFLKLRIFRPWQELLRIANSISSGD 180 Query: 197 FTQRANI-SGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQAN 255 F+QR +EM +LG A++ MS +L + Y LE+RVQ+KT + +N LSFL++++ Sbjct: 181 FSQRFRERKYHDEMTILGDAMSCMSTQLRKMYDELERRVQQKTLHIREQNLWLSFLYRSS 240 Query: 256 RRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQP---DMTCDDKG 312 +LHS A C R P+L L+ L ++LR+Y+ ++ N ++F C D Sbjct: 241 NQLHSSASTCLRYFPILKELEELIPFTSMQLRLYEYNNSNNFEQFKTSNTVRPKYCADHE 300 Query: 313 CQLC-PRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTA 371 C+LC + L+W L D + +YG+++A + L+ Q QLV TLVEQL+ Sbjct: 301 CELCLDKSFSQSTLNCKMLEWPLRDQYGEYGVMIAYCLNDQDLTPLQSQLVKTLVEQLST 360 Query: 372 TLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELL 431 +LAL+ + +QL++M+ERA IARELHDSIAQSLSC+K++VSCLQMQ L L+ Sbjct: 361 SLALEYQDYKNKQLMIMDERAVIARELHDSIAQSLSCLKIKVSCLQMQSKNLGAEQLVLI 420 Query: 432 SQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLV 491 ++R ELN++++ LRELLTTFRL+L EPGL PALE++ EE++ K GF ++L YQLPP V Sbjct: 421 QEMRTELNSAYSHLRELLTTFRLKLNEPGLHPALESTIEEFNKKLGFSIELIYQLPPNCV 480 Query: 492 PSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND--NQVKLTVQDNGCGVPENAIRSN 549 SHQAIHL+ I REALSN KH+ A VV + + N +++ ++DNG G+ + + N Sbjct: 481 SSHQAIHLVHIVREALSNIYKHANADCAVVQLDFDPIHNHIQVVIRDNGIGLSGDMTKVN 540 Query: 550 HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTH 597 HYG+ IM DRA++L G C + +GG EV + F + GD + Sbjct: 541 HYGISIMNDRAKNLPGKCSIDNHLNGGVEVKILFNATYSSLIKNGDDN 588 >UniRef50_A4VHY8 Two-component sensor NarX n=3 Tax=Pseudomonas RepID=A4VHY8_PSEU5 Length = 658 Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats. Identities = 199/595 (33%), Positives = 307/595 (51%), Gaps = 18/595 (3%) Query: 7 SPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPL 66 + ++V + ++ L M S +L ++G A AIN+AGSLRMQ+YRL Sbjct: 30 TRHSIVFNTLVAFVVIIGFSLVSMLASLYLADALEGDAEAINQAGSLRMQAYRLAFTAEH 89 Query: 67 SEKD--KPLIKEMEQTAFSAELTRAAER--DGQLAQLQG-LQDYWRNELIPALMRAQNR- 120 + + I +E+T SA L A R D L L G + +W+ + P L R Sbjct: 90 GPQALLEERIDILERTLRSASLRSALHRHGDTPLPGLHGGVLQHWQERMRPLLDAQPPRL 149 Query: 121 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ 180 + + +FV+ LD V +E ++ + + + L+ I L L Sbjct: 150 DDYRREAPEFVSELDVFVRTLQEASEGKLGVIRALQAGTLFIIVLIAFVLIYGLHNNLAT 209 Query: 181 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 P R L MA + DF+ R I G E+++L LN MS ELA YA +EQ+V +KTA Sbjct: 210 PLRSLTKMARDIGKGDFSGRVEIPGDTELSLLARTLNQMSQELAGLYAEMEQKVDDKTAA 269 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCE-RLSPVLNGLQNLTLLRDIELRVYDTDDEENHQE 299 L N L L+ + R L+S+ + +L +Q + I L + + + +H Sbjct: 270 LTRSNATLQLLFNSARMLYSQPDDPSLMMGSLLTKVQEVLDTGPISLCLNRSAEAGSHTA 329 Query: 300 FT---CQPDMTCDDKGCQLCP---RGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRH 353 T QP C C++CP G LP G+ T + L G L P G Sbjct: 330 MTSSDLQPPDYCKLPQCEVCPVNQSGRLPSGEELVT--FELRSGQDDLGSLRVAHPAGEP 387 Query: 354 LSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQV 413 L Q L+ TL + A+L+L + ++Q +L +MEERA IARELHDS+AQ+LS K+Q+ Sbjct: 388 LESWQTLLLTTLADLFAASLSLAQLGQKQARLALMEERAVIARELHDSLAQALSAQKLQL 447 Query: 414 SCLQ--MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEE 471 + L+ MQ ++ + + QI LN+++ QLRELLTTFR+++ EPGL+PAL+A+ EE Sbjct: 448 ARLKRLMQKESGQAQLDDSVQQIDRGLNSAYRQLRELLTTFRIKVNEPGLKPALQATIEE 507 Query: 472 YSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND-NQV 530 + A G ++ D+QL + ++ +H LQI REALSN +KH++A + + Q+ + Sbjct: 508 FGANSGLHIESDFQLDHCPLTPNEEVHCLQIIREALSNVVKHAEAEHCWLRLTQDGIGTI 567 Query: 531 KLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 + ++D+G G+ R+ HYG+II+R+RA SL G + R GGT V + F P Sbjct: 568 NVEIEDDGIGIRPEEQRTGHYGLIILRERANSLNGSISIGLRPGGGTRVHLRFPP 622 >UniRef50_Q0A9X9 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A9X9_ALHEH Length = 644 Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats. Identities = 200/610 (32%), Positives = 310/610 (50%), Gaps = 26/610 (4%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 + R L P + AL+V ++T IG GM ++ + Q A AIN AGSLRMQSYR+ Sbjct: 6 LYNRLLHPTLAGSLFALLVGVAT-IGFLGMLHGAFVAKTAQHDAAAINVAGSLRMQSYRI 64 Query: 61 LAAVPLSEKDKP-------LIKEMEQTAFSAELTR---AAERDGQLAQLQGLQDYWRNEL 110 + + + + E+ S EL R A D + + W EL Sbjct: 65 ATTLLDDQGPQAGAKTLDAEVAAFERRLHSPELLRPIPANPDDPVREAWEEVHRQWTTEL 124 Query: 111 IPALMRAQNRET---VSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLL 167 P L+ + + V +FV +D LV+ E RI V + ++ L+ Sbjct: 125 KPLLVDGSSAGSPVRYLDQVDRFVGTVDNLVTAAQSAAEARIHNSQSVRVLAMALLSGLV 184 Query: 168 VFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESY 227 ++ + L RL+ P +QL +A + DF RA +E+ M N M+ L + Sbjct: 185 LYGLYRLHMRLVLPVQQLNYVAGRLMKGDFEARARYLPNDELGMYARTFNRMADTLTDMQ 244 Query: 228 AVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELR 287 L RV EKTA L +N L ++ A+R L + A L +L+ L+ +T L + + Sbjct: 245 RSLAHRVSEKTAELRRRNSALELVYNASRDLSAGALESSNLKAMLDTLERVTGLGPLSIC 304 Query: 288 VYDTDDEENHQEFTCQPD---MTCDDKGCQLCPRGVLPVGDRGTT----LKWRLADSHTQ 340 + +++ + + + C C+ C V+P G L L D + + Sbjct: 305 LAQPGADKSFETLSTSAESRPARCSAPDCKGC-MNVVPRHGGGVVCPGMLALPLEDRNVR 363 Query: 341 YGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHD 400 YG+L G Q L +T+ + A A +R + + ++++MEERA IARELHD Sbjct: 364 YGLLQVEYTPGDQPRGWQLHLAETVASHIAAACARERELDAEHRIVLMEERAVIARELHD 423 Query: 401 SIAQSLSCMKMQVSCLQ--MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTE 458 S+AQ+LS MK+QV+ LQ M+ + P +LS++R+ LN+++ QLRELLTTFRL + Sbjct: 424 SLAQALSYMKIQVARLQGLMRKEHEPAQLEAILSELRDGLNSAYEQLRELLTTFRLGMDS 483 Query: 459 PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASE 518 PGL AL + +E+S + P++LDY+L + +++ IHLLQIAREAL+N ++HSQA+ Sbjct: 484 PGLESALRKAVKEFSERGDIPIRLDYRLSHWPLNANEEIHLLQIAREALANVVRHSQATR 543 Query: 519 VVVTVA-QNDNQVKLTVQDNGCGVPENAIRSN-HYGMIIMRDRAQSLRGDCRVRRRESGG 576 V VA +++ V L V DNG G+ + HYG IM++RA+ L G R+ R GG Sbjct: 544 ADVVVAPGSNHDVVLEVLDNGVGLAAVSEEPGHHYGTAIMQERAEGLGGMLRLGNRAGGG 603 Query: 577 TEVVVTFIPE 586 V++TF PE Sbjct: 604 MRVMLTFRPE 613 >UniRef50_Q2SF45 Signal transduction histidine kinase, nitrate/nitrite-specific n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF45_HAHCH Length = 620 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 174/606 (28%), Positives = 310/606 (51%), Gaps = 25/606 (4%) Query: 5 CLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAV 64 +L+ ++ +++ ++ + M S ++ + + A A+N AGSLRMQSYR+ A + Sbjct: 3 ARFQKSLIFRMGALMIAMVSLAMITMLASFFISESAEKDAEAVNIAGSLRMQSYRMQARL 62 Query: 65 -----PLSEKDKPLIKEMEQTAFSAELTRAAERDGQLA---QLQGLQDYWRNELIPALM- 115 P S+ L ++ + + L A +D Q +++ W N++ + Sbjct: 63 LTLDTPPSDFVAALTRQFAERIENPVLVAEAMKDDSSELHRQFMQVRESWENDVSGFIAT 122 Query: 116 RAQNRETVSAD-----VSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFT 170 A N + AD + +FV +D LV + E RIE + L+ L+ F+ Sbjct: 123 YAHNPDRRVADQLGEKIDKFVDEIDNLVQLYQIRAEDRIENLRLIQISALFLTFALVSFS 182 Query: 171 IIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVL 230 ++ L + P R L A ++ DF+ R + +E+ +L N MS L+E Y L Sbjct: 183 LLILHHHVELPLRSLTQNARKIARGDFSDRLEVKNDDELGLLAETFNQMSDALSEMYESL 242 Query: 231 EQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYD 290 E RV+ KT L+ N L+FL+ R + + L L ++T + +EL + Sbjct: 243 ETRVKNKTQALKRSNDSLNFLYHLAREVSEKTHENIDFQAWLEELTSITAVGGVELCLKT 302 Query: 291 TDD----EENHQEFTCQPDMTCDDKGCQLC--PRGVLPVGDRGTTLKWRLADSHTQYGIL 344 + E ++ + +C + C+ C + + + +++ L QYG++ Sbjct: 303 PEAVIPYEHIRNDYMTELPSSCQRQECEKCMVEKAQVCRDNDEVQVRYPLIKEGVQYGVI 362 Query: 345 LATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQ 404 + TL ++L Q QL+ + +Q+ L+L ++++++ +M ER IARELHDS+AQ Sbjct: 363 VCTLRNSQYLESWQHQLLQSFSDQVAVALSLKNQGDQERRVSLMNERNVIARELHDSLAQ 422 Query: 405 SLSCMKMQVSCLQMQGDA---LPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGL 461 SLS +K+QV+ L + E + ++++ + +++ QLRELLTTFRL ++E GL Sbjct: 423 SLSYLKIQVARLTRALQSKQVEDEQIDGITAELKEGITSAYRQLRELLTTFRLSISEKGL 482 Query: 462 RPALEASCEEYSAK-FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVV 520 A+ + E+ + + + LDY++ ++ IHLLQI REAL NA++HSQ + V Sbjct: 483 HAAILHTVEQLTEQSTNVKIVLDYRVEDIPFSPNEEIHLLQITREALQNAVRHSQGNLVT 542 Query: 521 VTVAQND-NQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 V++ + +V L + DNG G+PE+ + NHYG+ IMR+R ++L G+ ++R GGT V Sbjct: 543 VSLHSDPKKKVTLAIIDNGVGIPEDPEKLNHYGLAIMRERTRNLHGELAIQRIPEGGTAV 602 Query: 580 VVTFIP 585 + +F P Sbjct: 603 LFSFTP 608 >UniRef50_A1U593 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Marinobacter RepID=A1U593_MARAV Length = 618 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 205/604 (33%), Positives = 329/604 (54%), Gaps = 24/604 (3%) Query: 7 SPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPL 66 S LVN++A+++ + MA + + ++G+A AIN AGSLRM +++L A Sbjct: 3 SRSPLVNRLAVVIGAIVLTAIVSMATTLAVSNSIEGNATAINLAGSLRMGAFQLAARSAT 62 Query: 67 SEKD------KPLIKEMEQTAFSAELTRAAERDGQL---AQLQGLQDYWRNELIPALMRA 117 + I+ E + R+ R Q + ++ W N+L +L Sbjct: 63 DDPQDSTGTLNQRIEAYEDRLRDPAIIRSIPRTDDHPLAEQYKTVEYSWANQLRQSLESH 122 Query: 118 QNRETVSAD----VSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIW 173 Q +SA+ V ++ +D LVS +R TE RI+ + L+ + VF L+++ + Sbjct: 123 QPGAPLSAEMIAAVEEYTGEVDLLVSMLERRTEARIDLLHLIQIISMVFSVLIVLALFLD 182 Query: 174 LRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQR 233 L+ R+L+P R+L+ +A+AV +DF+ +AN+ G +E+A LG A + M++ELA +Y LE R Sbjct: 183 LKNRILRPLRKLVGIATAVGEQDFSHKANLKGSDELAQLGQAFDQMTSELALTYYELESR 242 Query: 234 VQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDD 293 ++KT LE + L + A+R L + LC P+L L+ L + I L ++D + Sbjct: 243 ARQKTEELEISHAALQVMHSASRGLFANHDLCSGAIPMLQDLEQLLGIGPIRLFLHDKES 302 Query: 294 EENHQEFTC---QPDMTCDDKGCQLCP-----RGVLPV-GDRGTTLKWRLADSHTQYGIL 344 E + T + C D C C +P+ + G L + G L Sbjct: 303 AEPVEAITTATPKRPFYCRDHHCNACLVTPEVYDEMPLENNDGRRLLLPIRTPGQLLGTL 362 Query: 345 LATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQ 404 P + L ++L++TL +QL + L++ +QQL + EER IARELHDS+AQ Sbjct: 363 EVWYPAEKGLPETSRRLLETLTDQLATAIFLEKQITEEQQLTLAEERTVIARELHDSLAQ 422 Query: 405 SLSCMKMQVSCLQMQGDALPESS--RELLSQIRNELNASWAQLRELLTTFRLQLTEPGLR 462 SLS +KMQV+ L+ + ++L ++ LN+++ QLRELL TFRL+L P L Sbjct: 423 SLSYLKMQVTRLRRLNIDGEQKPIHDDILDELSTGLNSAYRQLRELLATFRLKLDTPDLA 482 Query: 463 PALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT 522 AL + +E+S + G PV +Y LPP+ + ++ IH LQI RE L+NA+KH+ A+++ V Sbjct: 483 TALRKTIDEFSERLGKPVAFEYNLPPQTLSPNEEIHTLQIIREGLANAVKHADATDIAVK 542 Query: 523 VAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVT 582 V + QV+ ++QDNG G+P NHYG+IIM+DRA++L G VR R+ GG EV +T Sbjct: 543 VVFDSPQVRASIQDNGKGLPGGDQPVNHYGLIIMQDRARTLGGKVNVRNRDEGGVEVALT 602 Query: 583 FIPE 586 F+P+ Sbjct: 603 FVPK 606 >UniRef50_A6D1I3 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=1 Tax=Vibrio shilonii AK1 RepID=A6D1I3_9VIBR Length = 583 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 183/584 (31%), Positives = 324/584 (55%), Gaps = 19/584 (3%) Query: 9 LTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSE 68 +++ +++ +L+ +I L+GM +S V +QG H +N+ GS+RM Y+ + + S Sbjct: 6 ISITKKISFFILILCSISLSGMFISLITVDNIQGRTHIVNQIGSIRMLIYKSILSTDKSI 65 Query: 69 KDKPLIK---EMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSA 125 + + +I+ ++ + ++ D L Q+ N QN E++ + Sbjct: 66 RSENIIRINKKLNNPNIIEYMIKSGLSDQHGNLLAFFQENIEN---------QNYESIRS 116 Query: 126 DVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQL 185 + +FV +D L+ +R TE I+++ + + ++ + + +++I L +RL +PW + Sbjct: 117 NSDEFVKIIDNLIYKVERNTENNIKSLENIQKAFSIMIIIFGIYSIGNLYSRLFKPWMSI 176 Query: 186 LAMASAVSHRDFTQRANIS-GRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHK 244 L ++ ++ DF+++ + ++EM LG ++N MS + E+Y LE V KT L K Sbjct: 177 LDISRSIKSGDFSKKFIVQKHKDEMNELGDSINLMSESIKETYINLENVVYHKTEDLNRK 236 Query: 245 NQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF---- 300 N+ L FL++A ++ ++ C+ L+P+ L LT + +++ + D + +N Q F Sbjct: 237 NKYLDFLYRACKKFNNEQYSCDMLAPLTQELIELTGIHKVKILINDYQESDNTQIFDFGS 296 Query: 301 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ 360 +PD C + C LC + + + +L DS+ YG ++ + ++ + +Q Sbjct: 297 ISRPDF-CKNLSCNLCFDNEKTFIENLSEITIKLKDSNHDYGKIVISNNIKSCINVENEQ 355 Query: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 L+ E LT +L++ ++ QQL++++ER TIARELHDSIAQSLSC+K+++S LQM Sbjct: 356 LIIAFSELLTQSLSVFYKVQQDQQLLILKERNTIARELHDSIAQSLSCLKIKLSILQMDL 415 Query: 421 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV 480 L E ++ ++R E+N ++ QLRELLTTFRL+L G PALE + +EY+ K G + Sbjct: 416 SNLDEEQISIIGEMREEVNVAYCQLRELLTTFRLRLDGLGFLPALENTVKEYNKKIGTKI 475 Query: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG 540 Y++P + H +IHL+QI RE L+N KH+QAS+V + ++ DN + L + D+GCG Sbjct: 476 NFSYEIPANKISIHHSIHLIQIIRELLNNIYKHAQASDVTLDLSMKDNDISLVILDDGCG 535 Query: 541 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 + S YG+ I+ DRAQSL G + GTE +TF Sbjct: 536 FSTSQENS-RYGLKIIGDRAQSLSGKWDIISSPGKGTEFYLTFP 578 >UniRef50_Q3SJ17 Periplasmic Sensor Signal Transduction Histidine Kinase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJ17_THIDA Length = 644 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 189/624 (30%), Positives = 304/624 (48%), Gaps = 32/624 (5%) Query: 4 RCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAA 63 R +L+ ++ + + T + + M+ S + + +QGS AIN AGSLRMQS+R+ A Sbjct: 18 RTKLENSLLMRLGGMFVAITVLAVTSMSTSWMVAETIQGSGEAINLAGSLRMQSWRMAAI 77 Query: 64 VPLSEKDKP---------LIKEMEQTAFSAELTRAAERD---GQLAQLQGLQDYWRNELI 111 + D I E +A + D + +++ WR + Sbjct: 78 YQRLQSDGATEDAEDLGEAIARFEADLKAAPILAVLPSDETTPLWHVYRQVENDWRTVVK 137 Query: 112 PALM-----RAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALL 166 P L R +V D+ FVA ++ LV + E +I + ++ + L+ Sbjct: 138 PGLQVTPAAGRPARGSVLDDIPAFVAHINDLVKQIEDAAEAKILVMRVILGAAVIATMLV 197 Query: 167 LVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAES 226 + I + L+ P R LL +A + + R +++G +E+ LG A N+M+ +L+ Sbjct: 198 VALAIYLVNNILVYPLRGLLGLADQIGQGNLAVRNDLTGEDEIGRLGQAFNHMAEDLSML 257 Query: 227 YAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIEL 286 Y LE RV+EKTA L N+ L L+ + RL++ +L L+N+ L Sbjct: 258 YQNLEARVEEKTAELTIANRSLELLYHSIARLYNGPIAPRTYEILLKDLENVLGLGHGLA 317 Query: 287 RVYDTDDEENHQEFTCQPDM------TCDDKGCQLC----PRGVLPVGDRGTTLKWRLAD 336 + + D + C C C V P+GD L L D Sbjct: 318 CLVEGDGATRGRVIASTLPPLPEGADPCSVMSCAECLARPALAVHPLGDGRRVLSLPLND 377 Query: 337 SHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIAR 396 + YG+L +P G+ L Q QL++ L + + R E+ ++L +++ERA +AR Sbjct: 378 TEQLYGVLQLEMPPGKELVQWQSQLLEALSRHIGIAIGTARRTEQSRRLSLLDERAALAR 437 Query: 397 ELHDSIAQSLSCMKMQVSCLQMQGDALPE--SSRELLSQIRNELNASWAQLRELLTTFRL 454 +LHDS+AQSL+ MK+QVS L+ + + ++L+++R LN+++ QLRELLTTFRL Sbjct: 438 DLHDSLAQSLAYMKIQVSRLKPLVEGSGAGSEAGDVLAELREGLNSAYRQLRELLTTFRL 497 Query: 455 QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHS 514 ++ GL AL+ + E+S + G P+ L L + ++ IH LQI REALSN L H+ Sbjct: 498 RIEGEGLGAALQTTVTEFSNRGGIPITLVVHLAGCKLTPNEEIHALQIVREALSNVLNHA 557 Query: 515 QASEVVVTVAQN-DNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRE 573 QA + V+V+ N D V TV D+G G+ R++HYGM IM +RA++L G V Sbjct: 558 QARQAEVSVSCNSDGSVSATVTDDGIGI-HGTARAHHYGMTIMEERAKNLGGRLSVENLA 616 Query: 574 SGGTEVVVTFIPEKTFTDVQGDTH 597 + GT V + F+P D G H Sbjct: 617 ARGTRVALHFVPSTRRED-NGTIH 639 >UniRef50_B7UUR7 Two-component sensor NarX n=7 Tax=Gammaproteobacteria RepID=B7UUR7_PSEA8 Length = 622 Score = 457 bits (1175), Expect = e-127, Method: Composition-based stats. Identities = 188/590 (31%), Positives = 284/590 (48%), Gaps = 16/590 (2%) Query: 6 LSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVP 65 + +LV + + L ++ L GM + A IN AGSLRM +YR+ P Sbjct: 26 ILRRSLVVRFGCYLTLLVSLALIGMFSALLFADYTHQDAAVINHAGSLRMLTYRVALE-P 84 Query: 66 LSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETV-S 124 E + L+ + + S ++ R +R ++ L EL L R R Sbjct: 85 SLEGRQALLGTLGERLDSGDIRRLLQRQDADDPIRQLHQ----ELREGLARLDPRALPGR 140 Query: 125 ADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQ 184 A + +V +D+ V E R + + V + L++ T+ L ++ P R+ Sbjct: 141 AVLDAYVGDIDRFVGILQAKAERRSQLLSTVQGLCLFLSLLVVFVTLYDLSYHVIGPLRE 200 Query: 185 LLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHK 244 L + A + + R SG +E+A LG N M+ EL Y LE+RV++KT L Sbjct: 201 LTSTARRLGRGELDARVTYSGEDELAQLGERFNQMAGELKSIYGDLEERVEDKTRALSQS 260 Query: 245 NQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTC-- 302 +Q L L+ + RRL L P+LN L+ + + L + E + T Sbjct: 261 HQRLELLYASARRLGENPYDSRTLQPLLNQLEKVLDAGRVTLCLNKDGVERAYSSLTTTE 320 Query: 303 QPDMTCDDKGCQLCPRGVL----PVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQ 358 +P C C C P L L+ + ++G L GR L + Q Sbjct: 321 RPADFCLQGDCGSCREQASACDQPSSLAQPLLMQPLSIAGHRFGELFIESRSGR-LENWQ 379 Query: 359 QQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQM 418 QQL++T + + T AL QE++ +L + ER TIARELHDS+AQSLS +K+QVS L Sbjct: 380 QQLIETFCDNIARTFALSLQQEQESRLALFAERGTIARELHDSLAQSLSYLKIQVSRLGT 439 Query: 419 QG--DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKF 476 +A E + L ++R LN ++ QLRELLTTFRL L EP L AL + E+ + Sbjct: 440 LLKREAPAEKIEDTLDELREGLNGAYRQLRELLTTFRLSLDEPSLEAALGNAVAEFGERG 499 Query: 477 GFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTV-AQNDNQVKLTVQ 535 ++LD +L + ++ IH+LQI REALSN ++HSQA V + +Q D QV + V+ Sbjct: 500 EVTIELDNRLQHVPLSPNEEIHVLQIVREALSNVVRHSQAQRAWVRLSSQADGQVSIAVE 559 Query: 536 DNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 D+G G RS HYG+ IM++R Q+L R R GT V+ +F+P Sbjct: 560 DDGVGFDPQQNRSGHYGLTIMQERGQTLGSQLRFEARAPHGTRVLFSFVP 609 >UniRef50_Q8VUK2 Putative nitrate/nitrite sensor protein n=1 Tax=Halomonas halodenitrificans RepID=Q8VUK2_PARHA Length = 644 Score = 456 bits (1174), Expect = e-127, Method: Composition-based stats. Identities = 191/609 (31%), Positives = 315/609 (51%), Gaps = 27/609 (4%) Query: 6 LSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAV- 64 L +LV ++ +L +A+ L +AV+ + +G A AIN AGSLRM ++++L A+ Sbjct: 3 LLQHSLVARIVASLLAISAMALVSIAVTMTVANDSRGDAAAINMAGSLRMNTHQILTALL 62 Query: 65 --------PLSEKDKPLIKEMEQTAFSAELTRAAERDGQLA---QLQGLQDYWRNELIPA 113 + L++ E S ELT A A Q + L W ++++PA Sbjct: 63 RYDLHPDAAHDDGVAALVERFETRLASPELTDALPDAADHALRRQHRELLSRWTHDILPA 122 Query: 114 LMRAQNRETVSAD-----VSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLV 168 + RA+ + V +D LV+ +R +E +I+ ++++ + +++ Sbjct: 123 INRARAADDRQGPDPAPAFEALVGDIDALVTLLERNSESKIQLLIILQFLFLALTVVVVA 182 Query: 169 FTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYA 228 + +R L+ P R LL +A + R+F R + G +E+A+LG +NM+ ELA SYA Sbjct: 183 IALYDIRHNLVTPLRHLLVLAREAARRNFGYRTHFRGNDELALLGRTFDNMAEELATSYA 242 Query: 229 VLEQRVQEKTAGLEHKNQILSFLWQANRRLHSR-APLCERLSPVLNGLQNLTLLRDIELR 287 LE K A LE N+ + + +R L+ LC +P+L L+ L + I L Sbjct: 243 ELEAHASLKQAELERSNRAMQVMHDGSRALYGGGNDLCASAAPMLRQLEQLLDVGPIRLS 302 Query: 288 VYDTDDEENHQEFTCQPDMT---CDDKGCQLCPRGVLPV----GDRGTTLKWRLADSHTQ 340 + D D+ C D C C P+ +G L ++ Sbjct: 303 LNDPHDDRQIPILATHSPHRPEYCRDHECHACLIDPQPLKLEQAQQGECLLLPVSVGELM 362 Query: 341 YGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHD 400 G L + + LS ++L++ L +QL + L R E QQQ+ +M ER IARELHD Sbjct: 363 LGTLEVWHSRSQPLSDSVRRLLNALADQLATAVYLQRRIEEQQQVTLMNERTIIARELHD 422 Query: 401 SIAQSLSCMKMQVSCLQM--QGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTE 458 S+AQSLS +KMQV+ L+ Q +A E + ++R L++++ QLRELLTTFRL+L Sbjct: 423 SLAQSLSYLKMQVARLERMQQKEAPRERQAAVFDELRTGLDSAYRQLRELLTTFRLKLEG 482 Query: 459 PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASE 518 PGL AL + E+ + G+PV L+ +PP L+ ++ IH+LQ+ REAL+N LKH+ A Sbjct: 483 PGLASALHQTAREFGKRLGYPVILEVDVPPHLLNPNEEIHVLQVVREALANVLKHANAHW 542 Query: 519 VVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTE 578 +T+ + ++ + ++D+G G+ +++ HYG++IMRDRA +L G+ + R GGT Sbjct: 543 AAITINFQEARLHVVIEDDGIGLDDDSSPPMHYGLVIMRDRADTLGGEMTLHNRPGGGTR 602 Query: 579 VVVTFIPEK 587 + + F P+ Sbjct: 603 LALVFTPQT 611 >UniRef50_B4S080 Signal transduction histidine kinase, nitrate/nitrite-specific n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S080_ALTMD Length = 588 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 177/576 (30%), Positives = 307/576 (53%), Gaps = 19/576 (3%) Query: 30 MAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKD----KPLIKEMEQTAFSAE 85 M + ++ G Q A A+N AGSLRMQ+YR+ + + S D L+ E + T + Sbjct: 1 MFTTVFMSDGAQFDAQAVNVAGSLRMQTYRIHSVMQDSPGDIETINQLVDEFDLTLNTGV 60 Query: 86 LT--RAAERDGQLAQLQGLQDY-WRNELIPALMR-----AQNRETVSADVSQFVAGLDQL 137 L +A +G +A+ + W ++ + + + + ++ V ++ L Sbjct: 61 LVNQQALWDNGDIAKHHAIVANNWNEQVKQLIQTNLASPSNSNTSSLEVFNKLVEDIELL 120 Query: 138 VSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDF 197 V + + E+ I + LV + +L+ ++ + + QP +L ++A + DF Sbjct: 121 VVAYQKYAEINIANIRLVQSLALFSTLILIAIAMMIVHRHIEQPLSKLTSVARQIGQGDF 180 Query: 198 TQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRR 257 T RA +G+ E+A+L +N MS L S + LE++++ KT L NQ L L+Q +RR Sbjct: 181 TARAEETGKGELALLARTINKMSGSLYRSKSQLEEQIKRKTRKLTRSNQSLELLFQVSRR 240 Query: 258 LHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQP---DMTCDDKGCQ 314 L+ P P+LN L ++T ++D++L + ++ C + C Sbjct: 241 LNEVEPGSADFQPLLNKLADVTGVKDLDLCIMTAQGTGPYEHLMSSEKTIPDKCQQQLCH 300 Query: 315 LCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLA 374 C +K++L YG+L+ +L +G L Q QL + + EQ+ L+ Sbjct: 301 DCTEHDSLFPPVNGQMKYQLNIGDQHYGVLVVSLDEGSILEDWQHQLFEAIAEQVANGLS 360 Query: 375 LDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQM--QGDALPESSRELLS 432 + E+++++ +M ER IARELHDS+AQ+LS +K+QV+ LQ Q ++ E +++ Sbjct: 361 MKHQNEQRRRIALMNERTVIARELHDSLAQALSYLKIQVTRLQRLQQKESAQEQIDQVID 420 Query: 433 QIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKF-GFPVKLDYQLPPRLV 491 +++N L A++++LRELLTTFRL+L G++ ALE + + + F L+Y + Sbjct: 421 ELKNGLGAAYSELRELLTTFRLKLDGQGIKAALEQTISQLQNRSDDFNFTLNYHVSNIPF 480 Query: 492 PSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND-NQVKLTVQDNGCGVPENAIRSNH 550 + IHLLQIAREA NA HSQ + +++ N ++V LTV+DNG G+PE+ + NH Sbjct: 481 TPQEEIHLLQIAREATQNAFYHSQGFNIDISITSNSLSEVILTVKDNGIGIPEDPNKLNH 540 Query: 551 YGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 YG+ IM++R+++L G+ V+R + GT V+ +FIPE Sbjct: 541 YGLAIMKERSRNLDGELSVKRNDERGTTVMFSFIPE 576 >UniRef50_C7RBW7 Histidine kinase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBW7_KANKD Length = 584 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 177/589 (30%), Positives = 280/589 (47%), Gaps = 24/589 (4%) Query: 19 VLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEME 78 + + A+ LA + S ++ + + G A IN AGSLRMQS RL A+ + + ++ Sbjct: 1 MAIIVALALASLITSMFVSESLDGDAAQINVAGSLRMQSIRLSRALTAEQNNLDILNATT 60 Query: 79 QTAFSAELTR-----------AAERDGQLAQLQG-LQDYWRNELIPALMRAQNRETVSAD 126 T E R A + ++ + L+ W ET + Sbjct: 61 ATDEIREFERRLSILLSHGLIANSGNQKIVDIHKVLEQQWFEIKTQVNTNPARFETDYSL 120 Query: 127 VSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLL 186 + QFV +D+LVS +E +I + ++ L + + ++QP L+ Sbjct: 121 IDQFVGTIDRLVSILQSESEKKIRVLRMIQGSALFLTLLTAFIALYRINRSIVQPMNNLV 180 Query: 187 AMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQ 246 A A S +F R + +E+ +LGT N MS L + LE++VQEKT LE N+ Sbjct: 181 AAAKEASKGNFNVRVSDISNDEIGLLGTTFNEMSTRLQIIHNHLEEKVQEKTTKLERSNK 240 Query: 247 ILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDM 306 L L+Q + L RA +L ++ + L + + + Q ++ Sbjct: 241 SLELLYQTSHNL-VRANSRRDFENLLAQVEQTIGDGQVILCLDQKVQNSHQRIPISQHEL 299 Query: 307 T--CDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDT 364 CD C C + + YG L +G+ L+ Sbjct: 300 PKNCDQIHCSQCKIS------NNIRHSFHIHKQDKDYGSLQYFSNKGKP-EQWVHNLLQA 352 Query: 365 LVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP 424 + + + ++LD+ + ++ L++MEERA IARELHDS+AQSLS +K+Q S L Q D Sbjct: 353 IADNIAVAISLDQKRAQENLLLLMEERAVIARELHDSLAQSLSFLKLQTSLLSRQLDKNL 412 Query: 425 ES--SRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKL 482 E + +++ LN ++ QLRELLTTFRLQ+ EP L AL+ + E+S K G+ V+L Sbjct: 413 ERNTIENTIGDLKDGLNNAYRQLRELLTTFRLQIEEPSLESALKGTVAEFSTKCGYEVEL 472 Query: 483 DYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP 542 DY + + + S+Q IH LQI REALSN +HSQAS+ V ++ +V + V DNG G+P Sbjct: 473 DYSITNQTLTSNQQIHALQIIREALSNVQRHSQASKAWVKLSIQGGKVHVEVIDNGIGIP 532 Query: 543 ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTD 591 + HYG+ IM +RA SL + +R+ GT V +T P+ + Sbjct: 533 DEMPEGTHYGLSIMNERAASLNANIDIRKAPPQGTIVEMTLEPQTNTIE 581 >UniRef50_Q9F0Y0 Nitrate/nitrite sensor protein n=1 Tax=Pseudomonas fluorescens RepID=Q9F0Y0_PSEFL Length = 599 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 167/588 (28%), Positives = 275/588 (46%), Gaps = 12/588 (2%) Query: 7 SPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPL 66 +L + L V+L + LA +G + QG A AIN AGS+RM++Y L + Sbjct: 5 LRSSLPARAGLAVILIAILALASSLSAGLIAWFSQGDAAAINTAGSVRMETYHLSWKLAA 64 Query: 67 SEKD--KPLIKEMEQTAFSAELTRAAERDGQ----LAQLQGLQDYWRNELIPALMRAQNR 120 D +I ++Q S L RA DG + L W L PA+ R + Sbjct: 65 GANDDIPAIIASLQQRLDSPAL-RAVLEDGPETSLHKSYRDLMQRWNQTLRPAIERGDSA 123 Query: 121 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ 180 S+ S V LDQ V+ R +E + + + ++L+ + L+ ++ Sbjct: 124 FFQSSASSF-VEQLDQFVTLLQRQSEHKQGWQQAIQGIALFSTMIILLIGLYELQYGVVT 182 Query: 181 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 P ++L+ +F R N +E+ L T+ N M+ + +S+ LE +VQ+KT Sbjct: 183 PLQELVDATQRFRRGEFQVRVNHQSEDELGQLATSFNTMAETIEQSHRTLEAQVQQKTLN 242 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF 300 L+ N L L+Q++R L +R E L ++ Q + L + Sbjct: 243 LQQANAALELLYQSSRSLATRQANAEGLDELIRRFQQRLPGLRLTLCLQGQLQAPAKHLL 302 Query: 301 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ 360 + C + + +++ T+ G L A G + Sbjct: 303 ALHG--AASRQVCASSDCASCHKHNAARPQAFSISNQGTELGELKAHFVDGHAAQPWETA 360 Query: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 L+ L + +L+L R +E+ +L++++ER IARELHDS+AQ+LS MK+QVS +Q Sbjct: 361 LIQALANLIGTSLSLKRQREQDHRLLLLDERTIIARELHDSLAQALSYMKLQVSRMQTLM 420 Query: 421 DALP--ESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGF 478 ++ + ++R LN ++ QLRELLTTFRLQ+ + GL L+ + EE+S + F Sbjct: 421 RRGEPVQTLETVTGELREGLNNAYRQLRELLTTFRLQIRDDGLVQELKDTAEEFSNRGDF 480 Query: 479 PVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNG 538 V L + + + IH+LQI REALSN L+H+ A + + Q V+L+++D+G Sbjct: 481 QVHLFIDTLAFELSASEQIHILQITREALSNCLRHAHAENAWLELRQEGETVRLSIEDDG 540 Query: 539 CGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 G + H+G+ IM +RA+SL G ++ R GT + F PE Sbjct: 541 RGFSGEVDQCEHHGLNIMNERARSLHGQLQIHSRPPHGTRIQAHFQPE 588 >UniRef50_Q5QWJ9 Nitrate/nitrite sensor histidine kinase n=1 Tax=Idiomarina loihiensis RepID=Q5QWJ9_IDILO Length = 598 Score = 440 bits (1132), Expect = e-122, Method: Composition-based stats. Identities = 186/592 (31%), Positives = 313/592 (52%), Gaps = 16/592 (2%) Query: 9 LTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAV---- 64 +++N + + L + A + WL++ + A IN AGS RM++Y+ + Sbjct: 5 ASIINVFRVSLALIVIVASASSLSAFWLLEKSEQDAELINVAGSHRMKAYKFALQLSSGK 64 Query: 65 --PLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWR--NELIPALMRAQNR 120 SE + + EQ +A QLA + + W+ + I A+ Sbjct: 65 KVQASETAQEIDTLWEQPLLHRHFVKAGGSIQQLA--KDARTEWQRVHSEIAEQDFARFS 122 Query: 121 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ 180 + S + +V LD LV +E R+ETV + + F+ + F + L+ ++ Q Sbjct: 123 QQQSNAIDNYVNQLDTLVGQLQEHSERRMETVRSSLALASFFIVAIFFFLLTVLKRKINQ 182 Query: 181 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 P R LLA++ + DFT ++ I +E+ L +N MS ++ Y LE+RV+++T Sbjct: 183 PLRHLLAVSKRLGQGDFTAKSKIDNEDEIGQLSRTMNKMSETVSYFYGGLERRVEQQTQE 242 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF 300 L KN++LSFL+ R + + V+ L + + DIEL + + + Sbjct: 243 LSRKNKVLSFLYDTARSIIVHSYDYNNYQQVIEKLYEIGEVNDIELCLLTEEGNRPFLQL 302 Query: 301 TCQPDMT--CDDKGCQLCPRGVL--PVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSH 356 +P C+ C C + V + ++ L YG+L+ QG+ L+ Sbjct: 303 QPRPSSHEPCEAGDCATCLKAGPGASVIEDKLVYRFVLKREDQNYGVLIVRCEQGQPLAT 362 Query: 357 DQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL 416 QQQL+ + +QL + +L +E+ ++L +M ER IARELHDS+AQ+LS +K+QV+ L Sbjct: 363 WQQQLMSSTADQLALSQSLKSEEEQVRRLALMHERTVIARELHDSLAQALSYLKIQVTRL 422 Query: 417 QMQGDALPESSRELLS-QIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAK 475 + ++ + +S ++R LN+++ QLRELLTTFRL++ GL AL+ + ++ + + Sbjct: 423 HKGIEKNDRATIDDVSNELREGLNSAYRQLRELLTTFRLKVDGSGLYSALQTTVKQLTEQ 482 Query: 476 FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ-NDNQVKLTV 534 V LDY+L + H+ IHLLQI REA NA+ HSQ SEV ++++Q + V+L + Sbjct: 483 SNMVVHLDYRLNNIPLVPHEEIHLLQIIREASQNAVNHSQGSEVHISLSQPSGQDVELKI 542 Query: 535 QDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 D+G G+PENA + NHYG+ IM++R+++L G+ ++ R ESGGTEV TF P+ Sbjct: 543 TDDGIGLPENAEKVNHYGLAIMQERSRNLGGEIKISRLESGGTEVCFTFTPD 594 >UniRef50_D0IAW0 Nitrate/nitrite sensor protein n=3 Tax=Gammaproteobacteria RepID=D0IAW0_VIBHO Length = 594 Score = 437 bits (1123), Expect = e-121, Method: Composition-based stats. Identities = 154/587 (26%), Positives = 268/587 (45%), Gaps = 32/587 (5%) Query: 2 LKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLL 61 +K + ++ VA ++ + + + + + A AIN +GSLRMQSYR+ Sbjct: 32 IKNIIVKQSVTTIVARSLIGILFLAVIITGFAIFTLASSLNDAAAINTSGSLRMQSYRMA 91 Query: 62 AAVPLSEKDKP-LIKEMEQTAFSAELT---RAAERDGQLAQLQGLQDYWRNELIPALMRA 117 + L+ P I EQ+ + EL A D + L + W L P L + Sbjct: 92 YDIVLAPSRLPGHIDNFEQSLLAPELRILDNFAVPDEIRERYHSLIERWIK-LRPEL-ES 149 Query: 118 QNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRAR 177 +R V FV +D+ V + +E +++ + +V + L++F I + + R Sbjct: 150 DDRAFYIEQVGLFVNDIDRFVFALQQHSENKLQVLAMVGSGGLGLILALVLFLIQYTQRR 209 Query: 178 LLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEK 237 ++ P L+ + + +R+F + NE+ +L + M++EL YA LE ++ K Sbjct: 210 IVFPLNMLVKASQQIQNREFDAELPPARNNELGVLSNSFALMASELKGLYADLEHKITTK 269 Query: 238 TAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENH 297 T L NQ L+ L+ +++L S E +L N ++ + L+ ++ +N Sbjct: 270 TQKLTKANQSLNILYDCSKQLSSTFLNRESFERMLAITLNADGVKALSLQAHN----KNQ 325 Query: 298 QEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHD 357 ++ +G + ++ G+ TLKW+ Sbjct: 326 SDWEIAAGFP---EGGEWFELPLILDGESFGTLKWQGNPDIV------------------ 364 Query: 358 QQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ 417 L+ L L + + Q++ L VMEERAT+ARELHDSIAQSLS +K+Q S L+ Sbjct: 365 DNNLLSNLASILARGVYYNHAQKQAMHLAVMEERATLARELHDSIAQSLSYLKIQTSLLK 424 Query: 418 MQGDA-LPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKF 476 ++ I +L ++ QLRELLT FRL L+ AL E + Sbjct: 425 RHLKLINAPDCNDIAHDISKQLRIAYDQLRELLTAFRLSLSHGDFGLALHEMIETLQGQT 484 Query: 477 GFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQD 536 + + L + + + +H+LQI REA SNA+KH++A + V Q+ +Q ++ + D Sbjct: 485 TATLTVSSDLDTLSMDAQRQMHILQIIREACSNAIKHAKAEHITVRCFQHSHQARVDITD 544 Query: 537 NGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 +G G + +HYG+ IM++R+ L GD ++ G +V +TF Sbjct: 545 DGVGFSLIEEKPDHYGLNIMQERSSMLGGDLKITTAPEKGCQVTLTF 591 >UniRef50_A7JYP2 Histidine kinase domain protein n=7 Tax=Vibrio RepID=A7JYP2_VIBSE Length = 584 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 159/585 (27%), Positives = 281/585 (48%), Gaps = 34/585 (5%) Query: 9 LTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSE 68 ++ +A +LL + +A + + + A A+N AGS+RMQSYRL + + Sbjct: 13 KSVTRTIASAMLLILLLSVATTGFAIFTLASSLNDAEAVNVAGSMRMQSYRLANDIQVKS 72 Query: 69 KD-KPLIKEMEQTAFSAE---LTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVS 124 D I E + +S L + + L W + +++R N Sbjct: 73 VDYSSHIDAFEHSIYSPSMKALQHWSVPEDITHDYYRLIMRWHE--LKSVLRGDNPAEYQ 130 Query: 125 ADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQ 184 V+ FV +D+ V +E ++ + + + + + +F + ++R +++P R Sbjct: 131 LLVAGFVKQIDEFVFKLQSFSEQKLINLAWIGGLGLGGILCVSMFVVHFVRLEVVRPLRA 190 Query: 185 LLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHK 244 L+ + + +R F ++S NEM +L N M+ +L + Y LEQ V EKT L+H Sbjct: 191 LVFASEQIKNRSFNISLDVSSDNEMGILTRTFNRMATDLGKLYRGLEQAVDEKTRKLQHA 250 Query: 245 NQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQP 304 NQ L L+ +++ L + + +L + +L ++ ++L + ++ + Sbjct: 251 NQSLEVLYDSSKELTASRINQDNFQAILQHIASLEGIKAVKLEI----EQLGEPSWILME 306 Query: 305 DMTCDDKGCQLCPRGVLPV-GDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVD 363 C + C L + G+ L W+ L + L+D Sbjct: 307 GEECCHDCDEDCHSKALTLDGEHLGYLYWKAG------------------LPCPNEALID 348 Query: 364 TLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDAL 423 V+ L+ + +R Q + +Q+++MEERATIARELHDS+AQ+LS +K+QV+ L+ L Sbjct: 349 NFVQILSRAVYYNRAQRQAEQILLMEERATIARELHDSLAQALSYLKIQVALLKRSVKNL 408 Query: 424 PE-----SSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGF 478 P+ + ++++++ L+A++ QLRELLTTFRL + E AL+ E + + Sbjct: 409 PDEKAIAQANQVIAELDTGLSAAYTQLRELLTTFRLTIKEGSFGQALQDMVETLNEQTVA 468 Query: 479 PVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNG 538 + L +L + +HQ +HLLQ+ REA NA+KH+QA + + ND +V +TV D+G Sbjct: 469 DITLKNRLSSTELDAHQQVHLLQLIREAAINAIKHAQADNIHIQCLDNDGKVTVTVTDDG 528 Query: 539 CGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 G + NHYGM IM++RA L D + + G V + F Sbjct: 529 IGFEHQDEKLNHYGMSIMQERAARLHADLHIEASINKGCTVKLEF 573 >UniRef50_Q5E3J3 Sensory histidine kinase in two-component regulatory system with NarP (NarL) n=3 Tax=Aliivibrio RepID=Q5E3J3_VIBF1 Length = 563 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 157/589 (26%), Positives = 287/589 (48%), Gaps = 41/589 (6%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 +L R ++ + L+ + +I +++T++ L ++ S A A+N AGSLRMQSYRL Sbjct: 8 ILTRTIAQVMLL--IVMISIITTSLALITLSSSL-------KDAEAVNIAGSLRMQSYRL 58 Query: 61 LAAVPL-SEKDKPLIKEMEQTAFSAE---LTRAAERDGQLAQLQGLQDYWRNELIPALMR 116 + S + + + Q+ S L + D + ++ W L P+L+ Sbjct: 59 AYDIETNSPELIEHLDKFSQSIESPSFKSLDQWFVPDDIEDYYEDIRLQW-LSLQPSLL- 116 Query: 117 AQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRA 176 + N++ VS FV +D V +E +++ + L+ + + +F I + + Sbjct: 117 SDNKQIYLNKVSLFVDEIDHFVFRLQEFSERKLQLLSLIGALGLSLIVFSSIFIIFFTQR 176 Query: 177 RLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQE 236 +++ P L+A + A++ +++ + +++ NE+ LG A N+M+ ++ SY LE RV++ Sbjct: 177 KIVSPLHHLVAASHAMTKGNYSVQVDLNSDNELGQLGNAFNHMTRQVDLSYRELESRVED 236 Query: 237 KTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEEN 296 KT L N+ L L+Q +++L + + +L+ N+ + I R+ ++ Sbjct: 237 KTKKLSQANRSLMILYQCSQQLSASQLDEQAFKNILDTFTNIEGI--ISARLIVEEESGG 294 Query: 297 HQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSH 356 E T +LC G Q G LL L Sbjct: 295 DWEITSGEPDESPWSLQELCIDG-------------------EQLGYLLWQ----ESLPC 331 Query: 357 DQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL 416 Q+L+ + L + ++ Q++ QLI++EER+TIARELHDS+AQSLS +K+Q + L Sbjct: 332 PDQKLIINISNILARGIFYNQAQKQTHQLILLEERSTIARELHDSLAQSLSYLKIQTTLL 391 Query: 417 QMQGDALP-ESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAK 475 + Q + ++ L ++ L ++++QLR LL TFRL + + AL+ +++ Sbjct: 392 KRQLEKCDCINTSTTLVELDEGLKSAYSQLRGLLNTFRLTINKAHFGEALQEIMTTLASQ 451 Query: 476 FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQ 535 + L+ +LP + + Q +HLLQ+ REA NA+KHS+A +++T Q Q + ++ Sbjct: 452 TKINIHLNNELPSLPINAQQHVHLLQLIREATLNAIKHSKADNIIITCFQEGEQGCINIE 511 Query: 536 DNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 D+G G + NHYG+ IM++RA + G + G V V F Sbjct: 512 DDGVGFDPTEEKINHYGLRIMQERANCVHGKLSITSEIDNGCTVNVMFP 560 >UniRef50_Q7NV12 Transmembrane nitrate/nitrite sensor kinase transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NV12_CHRVO Length = 632 Score = 430 bits (1107), Expect = e-119, Method: Composition-based stats. Identities = 154/607 (25%), Positives = 256/607 (42%), Gaps = 44/607 (7%) Query: 25 IGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSA 84 + L + + L ++G A AIN GSLRM+++R AA +S + + E F Sbjct: 28 VALISIGYTLALSWRLEGGAAAINDVGSLRMRTFR--AAYLMSTQAPERVLRDEVAGFDQ 85 Query: 85 ELTRAAERDGQLA-----------QLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAG 133 L R D Q + L+ WRN++ P L+ A + + + FVA Sbjct: 86 TLARLKRGDPARPLFLPDNRDIRDQERRLEQRWRNDIRPLLLAADGAQPSAQRLHGFVAE 145 Query: 134 LDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVS 193 +D LVS +R E + + V+ V L ++ P R L + Sbjct: 146 IDNLVSLLERDNENHTNLLRMFQMVLIAMALAGAVTMAYMLFLMVINPVRALSDAMRRLR 205 Query: 194 HRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQ 253 + R + ++E+ ML N M+ + Y LE +V +KT +E +N L L+ Sbjct: 206 EGELDTRVKVDRQDELGMLAEGFNQMAERAQDLYQNLESKVAQKTREVEEQNLRLKTLYD 265 Query: 254 ANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF------------T 301 LH + L E + L LT R+ D + + Q Sbjct: 266 MTSFLHQQRALDETCQGFIRRLMQLTGADAANARLVDPERGKLDQIAQQGLPAEMALNEE 325 Query: 302 CQPDMTCDDKGCQLCPRGVL--------------PVGDRGTTLKWRLADSHTQYGILLAT 347 C PD C P VL + + + + GI Sbjct: 326 CIPDDACHCGEAVQQPFAVLRHIGELEGEEIRHCRKAGFASIAVFHIRNQREDVGIFTLY 385 Query: 348 LPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLS 407 Q R LS +Q L++TL + L + R ++Q V EER +A+ LHDSIAQSLS Sbjct: 386 FRQKRVLSMAEQMLIETLGQHLGVAIENQRLGAVERQFAVSEERNLMAQGLHDSIAQSLS 445 Query: 408 CMKMQVSCLQMQGDALPES-SRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALE 466 + +Q L+ ++ E+ +RE L+ IR + + +RELL FR ++++ A+ Sbjct: 446 FLNLQTQMLEDAMNSREEALARENLAFIRAGVQECYEDVRELLLNFRTRISQQEFPEAVR 505 Query: 467 ASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN 526 + + + P +L+ + + + Q + + I +EALSN KH++ASEV V + Sbjct: 506 TLLQRFEQQTRVPARLEMRGEGKPLDPQQQLQVFFILQEALSNIRKHAEASEVEVEIDNT 565 Query: 527 DNQVKLTVQDNGCGVPEN---AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + + ++DNG G A + H GM IM++RA+ + ++R + GT V +T Sbjct: 566 AS-FSMRIRDNGRGFDSGQLAAKSARHVGMSIMQERAKRIHSHIQIRSAPTQGTTVELTL 624 Query: 584 IPEKTFT 590 E+ + Sbjct: 625 PKEERIS 631 >UniRef50_Q5NYZ8 Nitrate/nitrite sensor kinase n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NYZ8_AZOSE Length = 651 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 156/636 (24%), Positives = 261/636 (41%), Gaps = 64/636 (10%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYR---LLAAVPL 66 +L ++ I+L+ + L + ++ ++ ++G+A AIN AGSLRM++YR LLA P Sbjct: 7 SLATKITGILLVFFLVALTAIGLTLFISWQLEGAAAAINDAGSLRMRAYRIDHLLARGPA 66 Query: 67 SEKDKPL---------IKEMEQTAFSAELTRAAER--------DGQLAQLQGLQDYWRNE 109 + + P+ + E+ EL R R +G A L + ++W Sbjct: 67 ATSNDPMAFTASLKSEFDDFER--VFGELRRGDPRRPLFIPRDNGIPADLDEMAEFWSLR 124 Query: 110 LIPALM----------RAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVM 159 + P L R V FV+G++++V +R+ + + + Sbjct: 125 IRPVLADLIATSDPERRRPGLAEFDRTVKSFVSGINEVVLKMERSYARNTDILRASQVSL 184 Query: 160 AVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNM 219 + + I + ++QP +L + DF R + +E L N M Sbjct: 185 IALAIIGTLVLIRFFFVLVIQPVCELQDGMKRMEQEDFNARVPVLASDEFGELSEGFNRM 244 Query: 220 SAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLT 279 + L YA LE+RV KT LE KN+ L L+ L + + L +Q Sbjct: 245 AVHLQGLYATLEERVAAKTRSLEGKNRELEILYDIGAFLREPSDVDSLCRGFLQRVQATF 304 Query: 280 LLRDIELRVYDTDDEE---------NHQEFTCQPDMTCDDKGCQLCPR------GVLPVG 324 R+ D+ E + + + + C + C R L Sbjct: 305 GAGASSARLLDSGSENLCLTVHNGLDREFIDREAVLQCGECLCGEAVRRGTSLVSELSAP 364 Query: 325 DRGTTLKW------------RLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTAT 372 D TL + + GI R LS + L++TL +QL Sbjct: 365 DPALTLSVCRRAGFQVITATAITANKQTLGIYNLYFVGARPLSDSDRLLLETLGQQLGIA 424 Query: 373 LALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPE-SSRELL 431 + R Q ++ V EER +ARELHDSIAQ L+ M +QV L+ D +R+ L Sbjct: 425 IENQRLQASGREHAVSEERNLLARELHDSIAQGLAFMNLQVQMLESALDRNEAGEARDTL 484 Query: 432 SQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLV 491 + +R + S+ +RELL FR ++ + L A+ A+ + + G LD + Sbjct: 485 AMLRQGVQESYDDVRELLVHFRTRVEKQDLALAITATLRRLAEQTGIATDLDVLGDAAPL 544 Query: 492 PSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPE----NAIR 547 + +L + +EALSN KH+ A V V + + + + + V+D+G G E A + Sbjct: 545 DAEAETQVLYVVQEALSNVRKHANARSVKVVIRRGIDGLSVVVRDDGVGFDEADRSTAAQ 604 Query: 548 SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 H G+ IMR+R + G +R GTE+ V Sbjct: 605 EAHIGLEIMRERTLRIGGRFSIRSARGKGTEIRVEL 640 >UniRef50_Q5P3L3 Nitrate/nitrite TWO-component sensor NARX n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P3L3_AZOSE Length = 648 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 190/619 (30%), Positives = 302/619 (48%), Gaps = 35/619 (5%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIG---LAGMAVSGWLVQGVQGSAHAINKAGSLRMQS 57 ++ R + L L+VL A+ L G+ S +V+ VQ S A+N AG LR + Sbjct: 15 VMGRVRASLAGRATQLLLVLAFVAVAFISLVGIGASVAIVETVQDSGSAVNAAGGLRRLA 74 Query: 58 YRLLAAVPLSEKD--------KPLIKEMEQTAFSAELTRAAERDGQLAQ---LQGLQDYW 106 +R + + D I E A L + ER+ +G+ W Sbjct: 75 HRAASVALAAALDGRTGHADVAAAIGAFEAELGHATLEKVLEREPDSVVASIYRGIHRDW 134 Query: 107 RNELIPALMRAQNR----------ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVH 156 L P L+ A R E + ADV F A +D LV+ +R TE +E + + Sbjct: 135 YVNLKPRLLGAPERASESPDVLFYENLLADVDAFTAQIDALVAVLERETETGLEQLRITL 194 Query: 157 RVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTAL 216 V + ++++ + +R R+ +P +L A A+ ++ DF + +GR+E+ +G+A Sbjct: 195 AVALGMVMIVMIAALCVIRRRVFRPLTELHACAARIAGGDFRAHSRYTGRDELGRVGSAF 254 Query: 217 NNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQ 276 N M+ EL+ Y LEQRV++KTA L N+ L L+ RL+ E L L+ Sbjct: 255 NAMADELSTVYRDLEQRVEQKTADLTRSNRALELLYHVIARLYHAPASPETYVETLKDLE 314 Query: 277 NLTLLRDIELRVYDTDDEENHQEFTCQPDMTC---DDKGCQLCPRGVLPVGDR----GTT 329 + L+ + V T D ++ C CP +P R Sbjct: 315 QVLGLKGSFVCVQPKHGGVATVLSTTMGDCPSRSGSEEECTHCPGRAMPWSYRREDGFDV 374 Query: 330 LKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVME 389 L D+ YG++ L G L Q LV+ + + L + ER++ L + E Sbjct: 375 FLVPLRDADHLYGMMRLALLPGERLRAWQHTLVEAVSRHMGIALGISHQSERERLLALQE 434 Query: 390 ERATIARELHDSIAQSLSCMKMQVSCL--QMQGDALPESSRELLSQIRNELNASWAQLRE 447 ER+ IARELHDS+AQSLS MK+Q S L +Q + + ++L+ ++ +NA++ QLRE Sbjct: 435 ERSIIARELHDSLAQSLSYMKIQASLLSSALQRPERRDDASDILADMKGGINAAYRQLRE 494 Query: 448 LLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 LL+TFRLQ+ E L ++ EEY+ + G P+ L+ +L R + +Q IH+L I REAL Sbjct: 495 LLSTFRLQM-EGDFARLLGSTVEEYAGRSGMPIDLEIRLGGRHLNPNQEIHVLHIIREAL 553 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGD 566 SNA +H++AS + V + + + V++ ++D+G G+ A +HYG+ IM +RA+ L G Sbjct: 554 SNATRHARASSIRVGLFGHPDGVRVIIEDDGKGIRAAAATEPHHYGLAIMGERARGLGGV 613 Query: 567 CRVRRRESGGTEVVVTFIP 585 + R GGT V V F P Sbjct: 614 LEIVPRPDGGTRVAVRFDP 632 >UniRef50_Q47HU2 GAF:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase, dimerization and phosphoacceptor region n=1 Tax=Dechloromonas aromatica RCB RepID=Q47HU2_DECAR Length = 646 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 138/634 (21%), Positives = 263/634 (41%), Gaps = 58/634 (9%) Query: 11 LVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKD 70 L ++ ++++ + + + ++ + ++G A AIN AGS RM++YRL + + Sbjct: 8 LSRKIIGVLVVFFLVATSAIGLTLLISWQLEGVAAAINDAGSQRMRTYRLGHLMARGLEA 67 Query: 71 KPLIKEM------EQTAFSAELTRAAERDGQLA-----------QLQGLQDYWRNELIPA 113 + + + E F D +L ++ WR + P Sbjct: 68 ETQVAALTAALSEEVVRFDKVQRDLQLGDPLRPLSSPRNFEVQDRLHDVEQSWRRIIRPL 127 Query: 114 L---------MRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMA 164 + R++ + ++ V G+++LV +R+ + V + + Sbjct: 128 VESYLAGDHQARSEVLDRFDLELEPSVMGINELVLAMERSYAYDTNLLRYVQVALVLLAI 187 Query: 165 LLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELA 224 V I + +++P L ++ D T R ++ +E+ L N M+ L Sbjct: 188 FGTVILIRFFEQLVIRPVSLLHVGMRRMTGNDLTVRVPVTSDDELGGLAAGFNQMAEHLE 247 Query: 225 ESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDI 284 ++Y LEQR++ +T L +N L L+ A L APL L+ ++N Sbjct: 248 DAYGSLEQRIEAETRRLAQRNHELGILYAATSFLSEPAPLEALCEGFLDHIKNALGADAG 307 Query: 285 ELRVYDTDDEENH---------QEFTCQPDMTCDDKGCQLCPRGVLPVGD---------- 325 +R+Y ++ + + + + C + C + P Sbjct: 308 AVRLYVPQTDKLYLMTHEGLSDEFVANEGQLNCGECLCGEVFQSSRPAAFATANPPEGMR 367 Query: 326 --------RGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDR 377 T + + + G+ + + LS + L++TL L + R Sbjct: 368 LRSCIREGFATATAFSILYDKQRLGVYNLYFRRSQALSEQEIHLLETLGHHLGVAIENQR 427 Query: 378 HQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD-ALPESSRELLSQIRN 436 + R+++L V EER +A+ELHDSIAQ L+ + +QV LQ + + + Q+R Sbjct: 428 LKSREKELAVSEERNLLAQELHDSIAQGLAFLNIQVQLLQDSLRKGKADEAMQTAGQLRE 487 Query: 437 ELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQA 496 + S+ +RELL FR ++ + L A+ A+ E++ + G + + +P Sbjct: 488 GVQESYDDVRELLVHFRTRVHQSDLDSAINAALEKFEGQTGIQTEFERIGATTPLPPTDE 547 Query: 497 IHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR----SNHYG 552 I ++ I +E+LSN KH++A V VTV Q K+ V+D+G G H G Sbjct: 548 IQIMHIVQESLSNIRKHAKAKRVRVTVRQELGTSKVMVEDDGIGFDPQNDPNCLSDRHVG 607 Query: 553 MIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 + IMR+RA + G+CR+ G+ V+++ E Sbjct: 608 LKIMRERAHRIGGECRITSNPGQGSCVILSLPKE 641 >UniRef50_P27896 Nitrate/nitrite sensor protein narQ n=113 Tax=Enterobacteriaceae RepID=NARQ_ECOLI Length = 566 Score = 423 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 171/575 (29%), Positives = 273/575 (47%), Gaps = 43/575 (7%) Query: 15 VALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPL-SEKDKPL 73 + L+ +LST I L +A S A AIN AGSLRMQSYRL + S + Sbjct: 18 IVLLSILSTGIALLTLASSL-------RDAEAINIAGSLRMQSYRLGYDLQSGSPQLNAH 70 Query: 74 IKEMEQTAFSAELTRAAE---RDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQF 130 + +Q S LT + + L W + + + A+++ + Sbjct: 71 RQLFQQALHSPVLTNLNVWYVPEAVKTRYAHLNANWLE--MNNRLSKGDLPWYQANINNY 128 Query: 131 VAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMAS 190 V +D V E ++ VV + + + L+ FT+ +R +++ P QL+ + Sbjct: 129 VNQIDLFVLALQHYAERKMLLVVAISLAGGIGIFTLVFFTLRRIRHQVVAPLNQLVTASQ 188 Query: 191 AVSHRDFTQR-ANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILS 249 + H F + + NE+ +L N MS+EL + Y LE V+EKT L + L Sbjct: 189 RIEHGQFDSPPLDTNLPNELGLLAKTFNQMSSELHKLYRSLEASVEEKTRDLHEAKRRLE 248 Query: 250 FLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCD 309 L+Q ++ L++ +L +++ +EL V EN + QP+ Sbjct: 249 VLYQCSQALNTSQIDVHCFRHILQIVRDNEAAEYLELNV-----GENWRISEGQPNP--- 300 Query: 310 DKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQL 369 P +LPV T YG L Q H+S + L++++ L Sbjct: 301 -----ELPMQILPVTM-----------QETVYGEL---HWQNSHVSSSE-PLLNSVSSML 340 Query: 370 TATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRE 429 L ++ Q+ QQL++MEERATIARELHDS+AQ LS +++Q++ L+ +++ Sbjct: 341 GRGLYFNQAQKHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRSIPEDNATAQS 400 Query: 430 LLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPR 489 +++ LN ++ QLRELLTTFRL L + L AL + + + LD +LP Sbjct: 401 IMADFSQALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAKLTLDCRLPTL 460 Query: 490 LVPSHQAIHLLQIAREALSNALKHSQASEVVVT-VAQNDNQVKLTVQDNGCGVPENAIRS 548 + + +HLLQI REA+ NA+KH+ ASE+ V+ V D + ++DNG G+ E Sbjct: 461 ALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDGNHTVYIRDNGIGIGEPKEPE 520 Query: 549 NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 HYG+ IMR+RA+ L G + GGT V ++F Sbjct: 521 GHYGLNIMRERAERLGGTLTFSQPSGGGTLVSISF 555 >UniRef50_A4G5M3 Putative Nitrate/nitrite sensor protein narX n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G5M3_HERAR Length = 672 Score = 423 bits (1088), Expect = e-117, Method: Composition-based stats. Identities = 151/639 (23%), Positives = 256/639 (40%), Gaps = 57/639 (8%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 M L P L N++ +++ + L+ + + L ++GSA AIN+AG +RMQSYRL Sbjct: 27 MNPFSLLPQRLSNKIVAVLIGFLLLALSAIGTTLMLSWQLEGSAAAINEAGGVRMQSYRL 86 Query: 61 LAAV------PLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQL-----------QGLQ 103 + + + + E + A A R D Q + Sbjct: 87 TSVLARLLNEQIEPDELRHNAEQQIRAIDATFARLQRGDPQRPLYLPPTNNIHTVFAQVV 146 Query: 104 DYWRNELIPA----LMRAQNR-----ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVL 154 + W EL P L +AQ + + FVA ++ LV +R +E R+ + Sbjct: 147 ERWDVELEPLAYAILQKAQPDRRPDWDRYLTQIDGFVADVNNLVQLIERDSETRMFWLRS 206 Query: 155 VHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGT 214 V+ + V I + ++QP +L ++ R + ++E L Sbjct: 207 WQLVLVAMALIGTVTMIYLMFLLIIQPVTRLQEGMQQMNGNKLGVRLPVESKDEFGQLTL 266 Query: 215 ALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNG 274 N M+ L SY LE RV++KTA LE +N+ L+ L+ + L P+ L Sbjct: 267 GFNQMADRLETSYNNLENRVRQKTAELEDQNRELALLYDSAAFLQRPQPMEMLCDGFLQR 326 Query: 275 LQNLTLLRDIELRVYDTDDEENHQEF------TCQPDMTCDDKGCQLCPRG--------- 319 + +RV + + H C G LC Sbjct: 327 ITQYFQADGGSVRVLEAARDNLHMVVHQGISKELVESEHCLKVGDCLCGEAAEKKISMVH 386 Query: 320 ---------VLPVGDRG--TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQ 368 L G T + + G Q R + L++ L Sbjct: 387 NLQQMDQAHALQCHREGFATVSIFHIYAHEQHIGFFNLHFRQPRVFDKHEHALLEALGNL 446 Query: 369 LTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD-ALPESS 427 L + R R++++ + EER +A+ LHDSIAQ L+ + +QV L + Sbjct: 447 LGVAIENIRLAMREREMAISEERNLVAQGLHDSIAQGLTFLNLQVQMLDDSLQKGRLKEV 506 Query: 428 RELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLP 487 E++ +R +N S+ +RELL FR +L + L +L+ + +++ + G V Sbjct: 507 AEIVPALRAGVNESYEDIRELLLNFRSRLIKGDLINSLQTTIDKFRRQSGITVNFVASGD 566 Query: 488 PRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN--- 544 +P Q + ++ I +EALSN KH+ AS+V + + Q++ L++ DNG G + Sbjct: 567 GAPLPYEQQLQIMFIVQEALSNIRKHASASKVEIRL-QDNQDFSLSIHDNGGGFDADTLL 625 Query: 545 AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + +H G+ IMR+RAQ + V GT V + Sbjct: 626 SKGESHVGINIMRERAQRIHASFEVHSTPLQGTTVRLQL 664 >UniRef50_A8FUN8 Two-component sensor NarX n=3 Tax=Shewanella RepID=A8FUN8_SHESH Length = 591 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 160/588 (27%), Positives = 287/588 (48%), Gaps = 33/588 (5%) Query: 7 SPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPL 66 S +LV + + +GL M S + + + G A IN+AGS+RMQ+ R+ A + Sbjct: 26 SSSSLVASAGQFMAIIITLGLFSMISSILVAESLSGDAERINRAGSMRMQAIRVSRANLI 85 Query: 67 SEKDKPLIKEMEQTAFSAELTRA--------AERDGQLAQLQGLQDYWRNELIPALMRAQ 118 + I E F +L+ + +AQ Q + W ++ Sbjct: 86 DQDGSRPILSQEIQVFENKLSHLFFGGIASTIDDPEVIAQHQKILSSWD------AIKQS 139 Query: 119 NRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARL 178 + T D +F +D+LV+ +E ++ + L+ + + ++ + L L Sbjct: 140 PQTTSVEDFDRFTIKIDKLVNLLQMESEKKLSLLRLIQGITLFSILIVSALVLFKLNRSL 199 Query: 179 LQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKT 238 + P +QL+ +AS +F + + NE+ +L + +MS +L +Y E RV +KT Sbjct: 200 IIPLKQLVRVASEAGKGNFNIKVDHIADNELGLLSRTIAHMSKQLENTYQEFEDRVDKKT 259 Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ 298 L NQ L L++A L + + ++ L + + + + + N+ Sbjct: 260 QELTQSNQSLEVLYRAASNLSNYEY-HQIDQKIIQELVQVLGYGKVSIVL--CEKSINNL 316 Query: 299 EFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQ 358 F T D ++ L +G ++ +P+ Q Sbjct: 317 TFYKAKTNTID--------------HQYMDVHQFVLEKRGRFFGDIVWQVPKHETPEDWQ 362 Query: 359 QQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL-- 416 +QL+ + + + + L++ + + +L++ EERA IARELHDS+AQSLS +K+Q+S L Sbjct: 363 KQLLQAMADIVATAIELEQKKNTENRLLIAEERAVIARELHDSLAQSLSFLKVQMSLLTR 422 Query: 417 QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKF 476 +MQ E E ++ I+ LN ++ QLRELLTTFRL+L +P L AL+ + E++ K Sbjct: 423 KMQKGLPEEQVNETINDIKQGLNHAYLQLRELLTTFRLKLDDPSLENALQGTVAEFAEKC 482 Query: 477 GFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQD 536 ++L++++P + ++Q IH+LQI RE+LSN +H++AS V + + D+++KL + D Sbjct: 483 QHAIELNFEIPQNYLTANQEIHVLQIIRESLSNVHRHAEASLAGVNLIKEDDKIKLAIWD 542 Query: 537 NGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 NG G+P N + H+G+ IM++RA+SL GT+V++ FI Sbjct: 543 NGRGLPSNLEQQGHFGLGIMKERAKSLNSVLAFEPNSPSGTKVLLEFI 590 >UniRef50_C4GHV1 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GHV1_9NEIS Length = 578 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 144/594 (24%), Positives = 271/594 (45%), Gaps = 31/594 (5%) Query: 5 CLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAV 64 L P +LV+++ L+V ++++ L ++G A A+N G LR Q+YRL + Sbjct: 3 RLIPKSLVSRLTLLVTTWLISAFIAISITMLLSLRLEGGAAAVNDTGGLRYQTYRLRLYL 62 Query: 65 PLSEKDKPLIKEMEQTA---FSAELTRAA--ERDGQLAQL-QGLQDYWRNELIPALMRAQ 118 + K + LI+ +QT ++ TR +D + Q + LQ YW ++ P Sbjct: 63 NDTSKVQSLIQTFDQTLARLHHSDPTRPLNLPQDRSIQQHLKLLQQYWETQIKPQYQSPN 122 Query: 119 NRETVSAD--VSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRA 176 + + + FVA +D L + ++ + + + V + ++ TI+ L+ Sbjct: 123 PNLALLDNHLIPNFVASIDSLTRTIEHNNAYYVQWLRVFQTALMVLIFVVSGITIVLLKI 182 Query: 177 RLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQE 236 +++P + L +A+ + F + E A++ N MS+ LA Y LEQ+V E Sbjct: 183 WIIRPLKNLETGVAAIQNSQFGEHIPEDNSTEFAIVDNGFNRMSSHLARLYGKLEQQVAE 242 Query: 237 KTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEEN 296 KT L KN L+ L+ + L+ + + L + LT ++ V++ Sbjct: 243 KTQDLVRKNHTLNTLYTVAQELNQTQTIRQAAQTFLPHILALTPAEAADVSVHNNLIARQ 302 Query: 297 HQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSH 356 + + P T +++ + T G L+ Q R + Sbjct: 303 SKR------------------QPETPPSLPPFTQSFKIRANETTLGTLVLYYNQ-RQPEN 343 Query: 357 DQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL 416 LV TLV QL + ++ E +Q V++ER TIA+ LHDSIAQSLS + +Q L Sbjct: 344 PDGGLVQTLVHQLALAIHNNQLAEESRQYAVLQERNTIAQGLHDSIAQSLSYLSLQTQML 403 Query: 417 QMQ-GDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAK 475 + + ++++E L I+ + + +RELL FR ++T+ + A+E + + + Sbjct: 404 ENAWANQETQAAQENLQSIKTGIQECYDDVRELLQNFRTKITQKNINEAIETLAQRLAEQ 463 Query: 476 FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQ 535 V ++ + Q + + I +E+LSN KH+QA V + + + LT+ Sbjct: 464 SHIRVHTEWHGNGAPLTPSQQLQFIFILQESLSNIRKHAQAQNVTIRIDNQQDY-TLTIT 522 Query: 536 DNGCGVPENAIRS-NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 D+G G + R+ +H G+ IM++RAQ +R ++ +++ T + +T ++ Sbjct: 523 DDGIGFNPHTERTDDHIGLNIMQERAQRIRARLSIQSQQNH-TRIQLTLPKKER 575 >UniRef50_C5S0V3 Nitrate/nitrite sensor protein NarQ n=6 Tax=Gammaproteobacteria RepID=C5S0V3_9PAST Length = 572 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 160/584 (27%), Positives = 281/584 (48%), Gaps = 37/584 (6%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEK 69 ++ ++ L + +S ++ + A IN +GSLR QSYR + + + Sbjct: 11 SIARRIGLYFFIIIGFATLISGISLGIMWSNKSDASLINVSGSLRYQSYRFWYEMNHAPE 70 Query: 70 DKPL-IKEMEQTAFSAELTRA----AERDGQLAQLQGLQDYWRNELIPALMRAQNRETVS 124 + L ++E + S EL A+ Q L+D W + +R Q+ E+ Sbjct: 71 NIELRLEEYRASLHSPELQALNSSYLLPKEVKARYQRLKDVWEE--MALYIRHQDHESYL 128 Query: 125 ADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQ 184 + + +V +D VS + E +++ + V + + + L + I + R R+++ Q Sbjct: 129 SRIEHYVKEIDAFVSALQKFAEFKLKIAISVIAISMLLIIALAYYGIWYTRKRIIKHLDQ 188 Query: 185 LLAMASAVSHRDFT-QRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEH 243 L+ + + DF I+ NE+ +L M +EL + Y LE +V +KT L Sbjct: 189 LVLASQQIQQEDFDHVSLAINEPNELGVLSKTFTQMVSELKKLYTSLEDKVADKTRRLTA 248 Query: 244 KNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQ 303 N+ + L+ ++ L S+ L VL + L+ I L VY D + T Sbjct: 249 VNRSMMVLYHCSQILTSKPVSRTLLLQVLERVLANEQLKGIALEVYGAD----YWNITID 304 Query: 304 PDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVD 363 D+ + Q + ++ L+W+ L ++L+ Sbjct: 305 TDLLSE----QWQQYEIAIENEKIAMLRWK------------------SSLLCPDERLLQ 342 Query: 364 TLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD-- 421 ++ E + ++ + ++ ++QQQLI+MEER+ IARELHDS+AQSL+ K+Q+ LQ G+ Sbjct: 343 SVAEMIGRSIYVVQNHKQQQQLILMEERSIIARELHDSLAQSLTFFKIQIRLLQRNGEIE 402 Query: 422 ALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVK 481 E + +L+ + LN +++QLRELL+TFRL + E L ALE + A+ + Sbjct: 403 QDWEKQKAILNDLEKALNDAYSQLRELLSTFRLTIEEANLTSALERMLDTLRARTSAQIS 462 Query: 482 LDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN-DNQVKLTVQDNGCG 540 L +LP + + + +H+LQI REA+ NA+KH+ ASE+ V N D + L ++DNG G Sbjct: 463 LTCKLPSLMFSAQEQVHVLQIVREAVINAIKHADASEIEVIAETNADGEHCLMIRDNGKG 522 Query: 541 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 + + HYG+ IM++RA L G+ +++ R GG V+V Sbjct: 523 IETDIEPEGHYGLTIMKERATELHGEFKIQNRSEGGALVMVILP 566 >UniRef50_C0DXB9 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXB9_EIKCO Length = 632 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 147/629 (23%), Positives = 264/629 (41%), Gaps = 53/629 (8%) Query: 9 LTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSE 68 +L ++ L+ LL I +A ++ + L ++GSA AIN GSLR++S+R+ + + Sbjct: 5 KSLSVRLKLLTLLWLVIAVASISYTLLLSWRLEGSAAAINDIGSLRLRSFRIALLIRENA 64 Query: 69 KDKPLIKEMEQTAFSAELTRAAERDGQL---------AQLQGLQDYWRNELIPALMRA-- 117 + + + ++Q + R +R L + L WR + PA A Sbjct: 65 GAEEIEQRLQQYDSILDNVRHGDRSRPLFLPPDKVVWQRFNELDQQWRQNIRPAFQVAYQ 124 Query: 118 QNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRAR 177 QNR + F++ LD LVS ++T I + L + V + + F + L Sbjct: 125 QNRPVTDKQLQPFLSRLDNLVSAVEQTNTRYISWLRLFQSCLLVLVVMSSAFMVFLLYWW 184 Query: 178 LLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEK 237 +++P + L +A+ F + I E A + N MS+ L + Y+ LE+ V EK Sbjct: 185 IIKPLQHLQQGVAAIHDGQFGIQIPIDHSAEFARVDNGFNQMSSSLHQLYSHLEEEVLEK 244 Query: 238 TAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENH 297 T L K+ L L+ +R L E L + + +R+ D + Sbjct: 245 TRDLASKHHTLETLYFFSRFLSQTQTTTEAAEVFLQKMLEMVAADAGSIRLI--DFKRQR 302 Query: 298 QEFTCQ---PDMTCDDKGCQL---CPRGVLPVGDRGTTLK-------------------- 331 + Q PD + CQ C G V D ++ Sbjct: 303 MDLVSQINLPDSLQTAEACQRFDDCLCGHAVVHDDWQPIQFVREPDSHAFDTDNSECSRM 362 Query: 332 -------WRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQ 384 +++ +G++ Q ++ +L + L Q ++ R + +Q Sbjct: 363 GFQQLRIFKIQYKAQDFGMVTLYFKQKEPVAMADTELWEALCSQFGVVVSNLRLIDESRQ 422 Query: 385 LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG-DALPESSRELLSQIRNELNASWA 443 L V++ER IA+ LHDSIAQ+L+ + +QV L+ + E E L I++ + + Sbjct: 423 LAVLQERNLIAQGLHDSIAQALTFLNLQVQMLESALQNHEQEQINENLHYIKDGIQECYD 482 Query: 444 QLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIA 503 +RELL FR ++ ++ + + + V L + + S Q + ++ I Sbjct: 483 DVRELLINFRTKINNKDFTEVVQTLTDRFQRQTQIGVHLHWHGNGPQLNSEQQLQVVFIL 542 Query: 504 REALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR----SNHYGMIIMRDR 559 +E+LSN KHSQA++V + + V + ++DNG G ++ NH G+ IM +R Sbjct: 543 QESLSNIRKHSQATQVDIRFNNRQDFV-MEIEDNGRGFNIERLKEQHSGNHVGLNIMHER 601 Query: 560 AQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 AQ +R + + T V + E+ Sbjct: 602 AQRIRAQLSLHSKPGS-TRVTLNLPYEER 629 >UniRef50_A5EZZ3 Nitrate/nitrite sensor protein NarQ n=51 Tax=Vibrionales RepID=A5EZZ3_VIBC3 Length = 583 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 158/591 (26%), Positives = 278/591 (47%), Gaps = 45/591 (7%) Query: 2 LKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLL 61 L R ++ L+ + + L+T + + +A S A A+N +GS+RMQSYRL Sbjct: 18 LTRTMAKAMLL--ILFLSALTTGVAIVTLASSL-------NDAEAVNVSGSMRMQSYRLA 68 Query: 62 AAVPLSEKD-KPLIKEMEQTAFSAELTRAAE---RDGQLAQLQGLQDYWRNELIPALMRA 117 + D K I E + +S + + L + W +EL L Sbjct: 69 YDIQTQSHDYKAHIFLFENSLYSPSMLALLDWTVPSDIQQDYYQLIERW-HELKKVLNSD 127 Query: 118 QNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRAR 177 Q + V+ FV+ +D V R +E ++ + V + + +F + ++R + Sbjct: 128 QKAQ-YLDQVAPFVSLVDGFVLKLQRFSERKLIALAAVGSFGLGGIFAVSLFVVYYIREQ 186 Query: 178 LLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEK 237 +++P ++ + + +R+F + EM +L N+M+ +L + Y LE V EK Sbjct: 187 VVRPLNAMVDASEKIKNRNFDVMLEETSSTEMGILSRTFNSMAGDLGKLYRGLEHAVNEK 246 Query: 238 TAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENH 297 T L+ NQ L L+ +++ L + +L L + + L + + Sbjct: 247 TNKLQMANQSLQVLYHSSQELTASRITASNFQTILRHWVALEGICALRLEIEE------- 299 Query: 298 QEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHD 357 + G L + P G L H + A P+ Sbjct: 300 ------------EAGKPLILQEGKPSGAVMLQTPLTLDGHHLGFLYWEAGSPEP------ 341 Query: 358 QQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ 417 + L+D L+ + ++ Q + +QL++MEERATIARELHDS+AQSLS +K+Q++ L+ Sbjct: 342 DRALIDNFALILSRAIYYNQAQRQAEQLLLMEERATIARELHDSLAQSLSYLKIQLTLLK 401 Query: 418 M-----QGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEY 472 + D + ++ +I L+ ++ QLRELLTTFRL LTE +L + Sbjct: 402 RSVTPLKSDGDLSKTENIIREIDKGLSDAYTQLRELLTTFRLTLTEGSFGQSLLGMLTQL 461 Query: 473 SAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKL 532 S + ++L+ L + +HQ +HL+Q+ REA NA+KH++A+++ V + +V++ Sbjct: 462 SGQTDAKIELNNALSSIALDAHQQVHLVQLIREATINAIKHAKATKIKVNCQEQQGRVQV 521 Query: 533 TVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 T++D+G G + NHYGM IM++RA LRG+ +V G +VV+T+ Sbjct: 522 TIEDDGVGFDLQDHKINHYGMSIMQERAARLRGELKVESAPGKGCKVVLTY 572 >UniRef50_Q2C653 Hypothetical nitrate/nitrite sensor protein NarQ n=2 Tax=Photobacterium RepID=Q2C653_9GAMM Length = 563 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 152/589 (25%), Positives = 281/589 (47%), Gaps = 33/589 (5%) Query: 2 LKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLL 61 + R +L +A ++L I + A++ + Q AIN AGSLRMQSYRL Sbjct: 1 MNRKKKTHSLTTTIARSLVLILIISIVTTALALTTLVSSQNDVEAINIAGSLRMQSYRLA 60 Query: 62 AAVPL-SEKDKPLIKEMEQTAFSAE---LTRAAERDGQLAQLQGLQDYWRNELIPALMRA 117 V S I++ E + +SA L+ + W +L P L R Sbjct: 61 FDVETKSPLLSAHIEQFEHSLYSAPMKGLSYWLISSEIQQHYNHIVLRWE-DLHPILER- 118 Query: 118 QNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRAR 177 N V+ FV ++ V+ +++E++++ + ++ + + L++ +TI + R + Sbjct: 119 DNNTVFIQHVAPFVHRINTFVAELQKSSELKLQRLAIIGVIGVSLIFLIVFYTIRYTRQQ 178 Query: 178 LLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEK 237 ++ P L+ V ++F + NE+ +L + MS++L + Y LE+ V EK Sbjct: 179 IVAPLNDLVDACKQVKRKNFRLDLLNNSNNELGILAHTFSKMSSDLEQLYQGLERSVNEK 238 Query: 238 TAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENH 297 T L H N+ L L+ +++L + + +L + + L +L + + + ++ Sbjct: 239 THRLRHANESLQVLYNCSQQLSVSHLTRVQFTNMLETMIAIDGLIGAKLIIEEPNGSTSN 298 Query: 298 QEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHD 357 + Q G + G+ L W+ L Sbjct: 299 IKVGQQA-------GQHWQYNELYIDGELMGQLWWQ------------------YSLPCP 333 Query: 358 QQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ 417 + L++ + + L + +R Q++ + L++MEERATIARELHDS+AQSLS +K+Q++ L+ Sbjct: 334 DKALINNISQILARAIYYNRAQKQAEYLLLMEERATIARELHDSLAQSLSYLKIQLALLK 393 Query: 418 MQGDALP--ESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAK 475 + + E++ + + I L+ ++ QLRELL+TFRL + + AL E + Sbjct: 394 RELNQNAQNENTHQAVYDIEAGLSNAYTQLRELLSTFRLAIKDANFGEALNQMLEPLEEQ 453 Query: 476 FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQ 535 + +D Q+ + +H +HLLQI REA+ NA+KH+ A E+ V Q + +++T+ Sbjct: 454 TDALLIIDNQISSMALDAHNQVHLLQIIREAVLNAIKHADADEITVNCQQTEQHIQVTII 513 Query: 536 DNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 D+G G + +HYG+ IM++RA L+G +++ G+ + + F Sbjct: 514 DDGKGFDIKDSKRDHYGLNIMQERASRLQGKLKIQSGIDQGSAICLRFP 562 >UniRef50_Q4FU45 Signal transduction histidine kinase sensor n=2 Tax=Moraxellaceae RepID=Q4FU45_PSYA2 Length = 707 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 163/680 (23%), Positives = 284/680 (41%), Gaps = 99/680 (14%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 ++ L +L + + + G L + A AIN AGS+RM +YR+ Sbjct: 19 IMNSRLLRHSLPLHAWGAIFTISILCFISTLGGGMLAWVSETDAQAINTAGSIRMATYRI 78 Query: 61 LAAVPLS------------------------------------------------EKDKP 72 + + E+ Sbjct: 79 SFQLATNFSENNPFDLNIGLKKNDLEGKKEGTENVKGENRIGEQDKLSPIRKEKTEEIST 138 Query: 73 LIKEMEQTA---FSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQ 129 LI++ME +L A + +G QL+ ++ W EL PAL+ ++ + Sbjct: 139 LIEDMESRLAELHDYQLANANDNEGINNQLKQIESQWFRELKPALLSQDAQKFYIVSF-K 197 Query: 130 FVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMA 189 ++ +D V+ E R ++ V V ++++ + LR +L P +QL+ Sbjct: 198 YIEDVDSFVNELQYRNEQRQTWQQILQIVSLVLTVIIMLVGMQRLRQNVLIPVQQLIKAN 257 Query: 190 SAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILS 249 + +ISG E LG + N+M++ + LE VQ KT L NQ+LS Sbjct: 258 YKFKQGKRNTKVSISGYTEFNALGDSFNDMASTIETHQRSLESEVQIKTQHLVKANQVLS 317 Query: 250 FLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDM--T 307 + ++ L + RL ++ + + L + + + M Sbjct: 318 LFYDFSKSLTTSQVSLYRLDTLITDFGKILPHLEFTLCIQNKFINNKNAIILHGEKMKEL 377 Query: 308 CDDKGCQLC--------------------------PRGVLPVGDRGTTLKWRLADSHT-- 339 C C C P+ VL + +TL D +T Sbjct: 378 CKKLNCDNCLTKEGVYTKSYPIAHQKVEFGELKVRPKSVLLI---NSTLFPNNNDGNTPS 434 Query: 340 -------QYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERA 392 + G G L + +L+ L ++ L+L + ++++ QLI+ EER+ Sbjct: 435 SQRIQIAKEGRTFFESEIGSELDLENNELIVALTNLISTALSLRKQRQQEHQLILFEERS 494 Query: 393 TIARELHDSIAQSLSCMKMQVSCLQMQG-----DALPESSRELLSQIRNELNASWAQLRE 447 TIARELHDS+AQSLS +K+Q+S L+ + S R+ + QI+ L++++ QLR+ Sbjct: 495 TIARELHDSLAQSLSYLKIQISVLERHLKNGSDEQNEASVRQHIDQIKAGLSSAYQQLRD 554 Query: 448 LLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 LL TFRL + AL + E++ K F + + ++ + + + I L+QIAREAL Sbjct: 555 LLITFRLTIDNDNFDEALHEAANEFALKGKFEITVSNRVMTLNLSATEQIDLIQIAREAL 614 Query: 508 SNALKHSQASEVVVTVAQNDNQ--VKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRG 565 SN +H+QA V + + +D + +T+ DNG G+ ++ H+G++IM++RA +L G Sbjct: 615 SNISRHAQAENVEIDLGYDDEDKYIVMTIVDNGVGISGTVDQTQHHGLMIMKERAHNLGG 674 Query: 566 DCRVRRRESGGTEVVVTFIP 585 + V ES GT + F P Sbjct: 675 ELIVSNNESQGTTITAKFAP 694 >UniRef50_A8GHJ7 Integral membrane sensor signal transduction histidine kinase n=3 Tax=Enterobacteriaceae RepID=A8GHJ7_SERP5 Length = 560 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 170/591 (28%), Positives = 288/591 (48%), Gaps = 38/591 (6%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 ++KR ++ +L + IV+LS ++ V A A+N AGSLRMQSYRL Sbjct: 2 LVKRSVTS-SLAKALFCIVILSVL----STGLALTTVADSLRDAEAVNIAGSLRMQSYRL 56 Query: 61 LAAV----PLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMR 116 + P E+ ++ Q +L R + LQ W+ + ++ Sbjct: 57 AYDLTGPAPELEQHLLQYRQSLQAPALQKLDRFYVPAEVREKYLSLQHAWQP--LAQQIQ 114 Query: 117 AQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRA 176 A A+++ +V +D V R +E+++ V + + + + L++F I ++R Sbjct: 115 AGQSADYQANIAGYVNQIDHFVLALQRYSELKLTIVAAISVLGFIAIIGLVLFCIRFMRR 174 Query: 177 RLLQPWRQLLAMASAVSHRDFTQR-ANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQ 235 +++ P + L+ + V RDF + + NE+ +L A MS +LA+ Y LEQ+VQ Sbjct: 175 QVVAPLKHLVDASQRVQQRDFNHPPLDTALPNELGVLSQAFTAMSGDLAKLYESLEQKVQ 234 Query: 236 EKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEE 295 EKT L+ N+ L L+ ++ L+ R + +L+ ++ L I L V D+ E Sbjct: 235 EKTQRLQQANKTLEVLYNCSQALNVRQIDQQAFEKILHIVRQSEDLHCIRLNVADSLSE- 293 Query: 296 NHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLS 355 Q + +P T + +G P+G+ L W+ + Sbjct: 294 -WQLRSGRPSPTLAWQSL-TIIQGDKPLGE----LSWQHKEQPPH--------------- 332 Query: 356 HDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSC 415 L+ ++ L+ + +R Q++ Q ++MEERATIARELHDS+AQ+LS +++Q++ Sbjct: 333 ---PHLMQSVANMLSRGVYFNRAQKQHMQFLLMEERATIARELHDSLAQALSFLRIQLTL 389 Query: 416 LQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAK 475 L+ ++E++S L ++ QLRELLTTFRL + E L AL Sbjct: 390 LRRTLADSTPEAQEIISDFDQALADAYRQLRELLTTFRLNIQEADLNTALHQLLAPLKVL 449 Query: 476 FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN-DNQVKLTV 534 ++L +L + + + Q +H LQI REA+ NA+KH+QA E+V+ + +++ Sbjct: 450 TDARIQLHCRLSSQALNAQQQVHALQIVREAVLNAIKHAQAQEIVIRCEMTAEGDNSISI 509 Query: 535 QDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 D+GCG+ HYG+ IM +RA L G R++R E GTEV +TF P Sbjct: 510 ADDGCGIASLNEPEGHYGLTIMSERAARLGGTLRIQRGEPDGTEVRLTFPP 560 >UniRef50_C7I506 GAF sensor signal transduction histidine kinase n=1 Tax=Thiomonas intermedia K12 RepID=C7I506_THIIN Length = 643 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 145/619 (23%), Positives = 254/619 (41%), Gaps = 46/619 (7%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEK 69 TL ++AL + L + + W+ ++G A A+N AG LRM SY++ A Sbjct: 6 TLTAKIALFSGAFLLLSLMSIGATLWISWNLEGGAAAVNVAGQLRMLSYKVALAAT-DHD 64 Query: 70 DKPLIKEMEQTAFSAELTRAAERDGQL---------AQLQGLQDYWRNELIPALMRAQNR 120 D L +++ + L A L + ++ +W++ +Q Sbjct: 65 DTQLSSDLQLIQDNLVLLHAGSPSRPLYVPWDGIIRQRYDAVRAHWQSLQPRWESASQAH 124 Query: 121 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ 180 +V+QFV +D VS + + + +A + + + +L Sbjct: 125 PVPREEVNQFVTQIDAFVSSIEHRLDFWTTVLHAFQMGLAALVVIGALLMFYAAYLFVLD 184 Query: 181 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 P +L A+ D++ R +I+ +E+ L N M+ +L Y LE+RV++KTA Sbjct: 185 PVGRLSRGVQALEQGDYSARVDINTTDELGDLAIGFNRMAGQLQAVYDELEERVRQKTAA 244 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYD---------- 290 L + Q L+ L++ + + L E + ++ + LR D Sbjct: 245 LRTEQQRLAALYEVSALVSKAQSLDELSQSFVQVVRRIAGADAAALRWTDESARRYLLLA 304 Query: 291 --------TDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDR-------------GTT 329 ++E+ TC G Q+ L R T Sbjct: 305 SDGLPAVLAEEEQCLMSDTCFCGQAQHHGGPQIVQFHRLQPEGRALPGRVACERLGYATL 364 Query: 330 LKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVME 389 L + G + + Q L+DTL L A + R +++ V + Sbjct: 365 LSIPVRAQQRLLGEIDLFFHAEQSADEAQHALLDTLAGHLAAAMESLRSAALEREAAVSQ 424 Query: 390 ERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP-ESSRELLSQIRNELNASWAQLREL 448 ERA +ARELHDSIAQSL+ MK+Q+ L+ A +++S++ + S A +REL Sbjct: 425 ERAFLARELHDSIAQSLAFMKIQLQLLRTALQAGKVGKIEQVVSELEVGVKESLADVREL 484 Query: 449 LTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS 508 L FR + E + PAL ++ +++ + G V L + + + I +L I +EALS Sbjct: 485 LLHFRTRTQEQDIEPALRSTVQKFELQSGLSVDLVFHGHGQPLDPDVQIQVLHIVQEALS 544 Query: 509 NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN---HYGMIIMRDRAQSLRG 565 N KH++A++ + V + + V D+G G I + H G IMR+RA ++ G Sbjct: 545 NIRKHAKATQARLVVDSLP-RWRFVVSDDGRGYDPEVIAQDGQAHVGQQIMRERAAAIGG 603 Query: 566 DCRVRRRESGGTEVVVTFI 584 + + GG V + Sbjct: 604 HLSIEAQPKGGVRVTLELP 622 >UniRef50_A2SGG0 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=2 Tax=Burkholderiales RepID=A2SGG0_METPP Length = 643 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 158/630 (25%), Positives = 262/630 (41%), Gaps = 53/630 (8%) Query: 3 KRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLA 62 R L +L ++ + L + L +A + W+ ++G A A+N+AG LRMQ++R Sbjct: 9 SRRLQRASLAAKLGALGSLIMVVALGSIAFTVWVTWQLEGGAAAVNEAGRLRMQTWR--Y 66 Query: 63 AVPLSEKDKPLIKEMEQTAFSAELTRAAERD-----------GQLAQLQGLQDYWRNELI 111 A S +D P + + Q + A L D A LQ ++ W+ L Sbjct: 67 AQVASAQDLPQLPALAQQ-YDATLALLDAGDPARPLFVPRDEDTRAALQAVRSRWQA-LQ 124 Query: 112 PALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTI 171 A+ V +D LV+G + + + + + V + Sbjct: 125 RAISEGATPLQAGQLAGDLVIEIDHLVTGIEAHLQRWTSILSALQFTLLALALAAGVALL 184 Query: 172 IWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLE 231 + QP +L AV+ D R ++ +E + N+M+ L + Y LE Sbjct: 185 YAAHLFIFQPLARLQRGLEAVARGDLGARVDVETHDEFGEVADGFNHMAMRLEDLYRGLE 244 Query: 232 QRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDT 291 +V EKT L + + L+ L++A+RR+ A L E + + + LR +D Sbjct: 245 TKVAEKTEHLRTERERLAALYEASRRVAQAASLDELAQGFVRQFREVARADAALLRWHDA 304 Query: 292 DDEE--------------NHQEFTCQPDMTCDDKGCQLCPR----GVLPVGDRG------ 327 + H+ D C + PR L GD G Sbjct: 305 EQGRMLMLAADRVPAAMLEHERCLAPGDCHCGNGAAPGGPRTITIHALTDGDTGDSAGTC 364 Query: 328 ------TTLKWRLADSHTQYGIL-LATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQE 380 L + G + L R + D + L++ L QL + R Q Sbjct: 365 RRFGFQRVLTLPVLLQDQTLGEVDLLWRDATRPVLDDDRALLEGLAAQLAGGIESVRAQA 424 Query: 381 RQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA-LPESSRELLSQIRNELN 439 Q++ V EER IARELHDSIAQ+L+ MK+Q+ L+ P ++ ++ ++ + Sbjct: 425 LQREAAVSEERGFIARELHDSIAQALAFMKIQLQMLRGALRRGDPAATTRVVDELDAGVR 484 Query: 440 ASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHL 499 S A +RELL FR + L AL A+ +++ + G P +LD + P + + L Sbjct: 485 ESLADVRELLLHFRTRSDGAELAAALRATLQKFQHQTGLPAQLDVRGPVLPLAPDVQVQL 544 Query: 500 LQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS-----NHYGMI 554 L + +EALSN KH+QA +V VT+ ++ +TV+D+G G A S H G+ Sbjct: 545 LHVVQEALSNVRKHAQARQVWVTLDPRP-ELSVTVRDDGRGFDLAARNSDDGDDGHVGLR 603 Query: 555 IMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 IMR+RA + + + GT+V + Sbjct: 604 IMRERAAGIGAEVEITSTRGEGTQVRIAVP 633 >UniRef50_B4RLW4 NarX/NarQ n=17 Tax=Neisseria RepID=B4RLW4_NEIG2 Length = 589 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 135/599 (22%), Positives = 263/599 (43%), Gaps = 35/599 (5%) Query: 7 SPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLA---- 62 PL+L ++ L+ L + + ++ L ++ +A I +AG+L+MQ+YRL Sbjct: 11 IPLSL--RLKLLTGLWVGLAALSVVLTLLLSFRLENAASVIEEAGNLKMQAYRLAYMAGE 68 Query: 63 ---AVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLA----QLQGLQDYWRNELIPALM 115 + + K +++ + S + D LA Q + D W+ ++P L Sbjct: 69 GSPRAQIDNQIAEFEKSLKRISQSDAIHPLIPSDNPLAYDLIQSMLIID-WQANILPPLQ 127 Query: 116 RAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLR 175 R ++ +F ++ + + E + V+ + + V + W + Sbjct: 128 AY--RRPTQIELYRFAGNIELFLQALENAGEKNTWWLRRFQWVIMLMTLVSSVLMLFWHQ 185 Query: 176 ARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQ 235 +++P + L A + R F G E +G N M+ L Y LE +V Sbjct: 186 IWVIRPLQALREGAERIGQRHFDIPVPEDGTPEFKQVGRCFNQMALRLKTLYDDLEGQVA 245 Query: 236 EKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEE 295 E+T LE +N+ L+ L++ R LH + LN + + + + + D Sbjct: 246 EQTHNLEKQNRNLTLLYRTTRDLHQSYTPRQAAEEFLNHILPAVGAQSGNICLENGSDT- 304 Query: 296 NHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLS 355 D G P ++ + + + + G+L G L+ Sbjct: 305 --------------DISVHTAEHGKKPPLEKYHDETFPIEYQNEKLGMLSLGFSDGTSLT 350 Query: 356 HDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSC 415 D + L+ TL+ QL +LA + +E ++ L V++ER+ IA+ LHDSIAQ+L+ + +QV Sbjct: 351 GDDRTLLQTLIRQLGVSLAGAKQEEEKRLLAVLQERSLIAQGLHDSIAQALTFLNLQVQM 410 Query: 416 LQMQ-GDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSA 474 L+ + E + E + I+ + + +RELL FR +++ A+ ++ Sbjct: 411 LETAFAENKREEAAENIGFIKTGVQECYEDVRELLLNFRTKISNKEFPEAVADLFARFTQ 470 Query: 475 KFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTV 534 + G V+ ++ L + + ++ I +E+LSN KH++A+ V T+++ + +T+ Sbjct: 471 QTGITVETVWENGSFLPTQDEQLQMIFILQESLSNIRKHARATHVKFTLSEYGGRFTMTI 530 Query: 535 QDNGCGVPEN---AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFT 590 QDNG G +H G+ IM++RA+ +R +R + GT V +T P+++ Sbjct: 531 QDNGQGFDTEKIGEPTGSHVGLHIMQERAKRIRAVLEIRSQAQQGTTVSLTGAPKESLP 589 >UniRef50_C4KA07 GAF sensor signal transduction histidine kinase n=2 Tax=Betaproteobacteria RepID=C4KA07_THASP Length = 655 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 142/633 (22%), Positives = 252/633 (39%), Gaps = 59/633 (9%) Query: 11 LVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKD 70 L ++ ++L + LA +A++ ++ ++G+A AIN AGSLRM+ YR+ + ++ Sbjct: 16 LSVKITGMLLGFFLVALAAIALTLFISWRLEGAAAAINDAGSLRMRLYRVAHHLARADLH 75 Query: 71 -----------KPLIKEMEQTAF-----SAELTRAAERDGQLAQ-LQGLQDYWRNELIPA 113 + + + ++ R+ + Q L G+ + W +L P Sbjct: 76 TSDRQGFAGDLRARVDDFDRILGVLRRGDPSRPLFVPREAGIQQVLSGMSEEWSVQLRPI 135 Query: 114 LMR-AQNRET---------VSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFM 163 L+ A + + +V ++ V +++ + ++ Sbjct: 136 LLAIAADPDPANLHRRGLEFDRAARDYVEDINDFVLRMEQSYARNTNILRTSQVILVALA 195 Query: 164 ALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAEL 223 + + + + +++P +L + DF R + ++E L N M+A L Sbjct: 196 VIGTILLLRFFFLTVIRPVFELHEGVKRMGQEDFDARVPVLSQDEFGELSAGFNRMAAHL 255 Query: 224 AESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRD 283 Y LE+RV KT LE KN+ L L++ L + L +Q Sbjct: 256 QNVYDTLEERVVAKTRSLEEKNRELEILYEIVAFLREPNDVDTLCKGFLERVQKTMGASA 315 Query: 284 IELRVYD--------------TDDEENHQEFTCQPDMTCDDK--------------GCQL 315 R+ D DD + +E + C + Sbjct: 316 SSARLLDLESRNLCMIVHDGLGDDFLDREEVLACGECVCGEAAQGSGLSLTLDVRNAALA 375 Query: 316 CPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLAL 375 R T + S G+ Q + +QL++ L +QL + Sbjct: 376 VTRDACRRAGFRTVSATSITASKRALGVFNLYFDQPDAIGDADRQLLEALGQQLGIAIEN 435 Query: 376 DRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ-GDALPESSRELLSQI 434 R R+++L V EER +ARELHDSIAQ L+ + +QV L+ + + + Sbjct: 436 QRLHARERELAVSEERNLLARELHDSIAQGLAFLNLQVQMLERALAENRAADVSTTVEML 495 Query: 435 RNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSH 494 R + S+ +RELL FR ++ + L A+ A+ + + G LD Q + Sbjct: 496 RRGIQESYEDVRELLVHFRTRVEQQDLDAAIAAALRRLAEQTGIATDLDVQGDGAPLDPE 555 Query: 495 QAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN---HY 551 +L I +EALSN KH+ AS V V V + + + +TV+D+G G E+ S+ H Sbjct: 556 AETQVLYIIQEALSNVRKHAGASTVSVGVRRGRDGLAVTVRDDGVGFAEDRDASDSEAHI 615 Query: 552 GMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 G+ IMR+RA + G VR GTE+ + Sbjct: 616 GLQIMRERAMRIGGRFAVRSSPGRGTEIRLELP 648 >UniRef50_Q46R21 GAF:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase, dimerisation and phosphoacceptor region n=41 Tax=Burkholderiales RepID=Q46R21_RALEJ Length = 675 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 159/622 (25%), Positives = 259/622 (41%), Gaps = 49/622 (7%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEK 69 L ++ L+ L S + L +A + WL ++G+ AIN AGSLRM++ R+ + L+ Sbjct: 29 RLSTRIILLSLASLLVVLTMIAGTLWLSWKLEGAGAAINDAGSLRMRANRVAIELGLANA 88 Query: 70 DKPLIKEMEQTAFSAELTRAAERDGQL-----------AQLQGLQDYWRNELIPALMRAQ 118 + ++ + A L + + + QL + W++EL P Sbjct: 89 GQAGARDAQIQALDGTLAQLRKGNPVRPLFLPDEPAIHEQLDRVAYDWQHELRPLAQAGS 148 Query: 119 NRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARL 178 V A + FVA D+LV + + + + + L +A + V I L + Sbjct: 149 GVAYVQA-LPAFVAEADRLVMLIEHDSARKTDLLRLSQAGLAAIACVGTVAVIYLLYLWI 207 Query: 179 LQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKT 238 + P +L ++ R+F+ R + R+E L N M+AEL + Y L RV KT Sbjct: 208 ILPVLRLQDGLRRMAAREFSLRLPVETRDEFGTLNAGFNRMAAELQDLYQDLAARVASKT 267 Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ 298 A LE +N+ L L+ L+ L + +RV D + H Sbjct: 268 AELERQNRDLETLYDMAAFLNQARDAEAMARGFLERVMGQFDADGGSVRVMDAQHGKLHL 327 Query: 299 EFTCQPD---------MTCDDKGCQLCPR-GVLPVGDRGTTLK----------------- 331 + M D C R GV+ + D T + Sbjct: 328 LASAGLPAALAESGNCMAVDACHCGDATREGVVAIADLRRTTRRPLLPQPSPCTREGFTA 387 Query: 332 ---WRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVM 388 +R+ G R L +QL+DTL + L L R +QL V+ Sbjct: 388 IAAFRIESQRGAIGTFALHFHAPRELPPSDRQLLDTLAQHLGIALEHLRLSASARQLAVV 447 Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP-ESSRELLSQIRNELNASWAQLRE 447 EER +A+ LHDSIAQ L+ + +QV L D +RE++ +R+ + S+ +RE Sbjct: 448 EERNLVAQGLHDSIAQGLNFLNLQVQLLGDAVDRDDLAEAREIVPMLRHGVEESYQDVRE 507 Query: 448 LLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVP--SHQAIHLLQIARE 505 LL FR +LT LRPA+E + E + + L +P Q + +L I +E Sbjct: 508 LLNNFRSRLTPGELRPAVEETVERFRRQCRTEATLVIDDHGNRLPLQPEQQLQVLFILQE 567 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN---HYGMIIMRDRAQS 562 ALSN KH+ A+ V V++ + + +L V+D+G G + + H G+ IMR+RA Sbjct: 568 ALSNVRKHAMAAHVTVSL-CHGHDFRLVVEDDGEGFDPAELGRDSEAHVGLNIMRERAAR 626 Query: 563 LRGDCRVRRRESGGTEVVVTFI 584 L + R G + + Sbjct: 627 LHARLAIDARPGRGVRIELVLP 648 >UniRef50_C1D9F9 NarX n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D9F9_LARHH Length = 637 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 152/624 (24%), Positives = 258/624 (41%), Gaps = 47/624 (7%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEK 69 +L ++ L+ LL + + + + L ++G A AIN AGSLR ++Y L + + Sbjct: 15 SLATKLMLLSLLWLMLAMVSIGFTLHLSWKLEGGAAAINDAGSLRKRTYHLAYLI--ASH 72 Query: 70 DKPLIKEMEQTAFSAELTRAAERDGQLAQL-----------QGLQDYWRNELIPALMRAQ 118 E E+ F L + D + W+NE+ P + RA Sbjct: 73 APAARIEHERQDFRVTLNNLRQGDPARPLFLPDNPEVHRMAALIDARWQNEVHPYVQRAL 132 Query: 119 NRET--VSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRA 176 E + D V ++ LV + + + + V + L Sbjct: 133 RGEIQLTAVDFEDVVNDINLLVHLIELDNARNTTLLRFFQTSLIAMALIGCVTMLYLLYL 192 Query: 177 RLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQE 236 ++QP RQL A + D R ++ R+E +L N M+ L + YA LE +V+E Sbjct: 193 LVIQPVRQLGAGMRKLHDGDLGARVKVASRDEFGVLSEGFNEMARRLQDLYANLEDKVRE 252 Query: 237 KTAGLEHKNQILSFLWQANRRLH--SRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDE 294 KT +E KN+ L+ L+Q LH L E L + L L+ D Sbjct: 253 KTLSVEEKNRQLTALYQVTSFLHRPQTQTLDEMGEGFLQRVMALVGADAASLKFVDAQRG 312 Query: 295 ENHQEFTCQ-PDMTCDDKGC---QLCPRG-----VLPVGDR----------------GTT 329 + Q + PD + C + CP G LPV + Sbjct: 313 KLDQIVSVGLPDSLNVHETCVSVEQCPCGAALKQALPVAVHLNEVCAGDWPCRNTGFASL 372 Query: 330 LKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVME 389 + + +L R ++ L++TL L + R ER++QL V E Sbjct: 373 AVFHVRYHGQNVALLTLLFRTPRSVAEPDANLIETLASHLGTAIESRRLAERERQLAVAE 432 Query: 390 ERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP-ESSRELLSQIRNELNASWAQLREL 448 ER +A+ LHDSIAQSLS + +QV L+ +A E+++E L+ IR + + +REL Sbjct: 433 ERNLMAQGLHDSIAQSLSFLNLQVQMLESALEAGESEAAQENLAFIREGVAECYEDVREL 492 Query: 449 LTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS 508 L FR ++++ A+ + + L + + Q + ++ I +EALS Sbjct: 493 LLNFRTRISKEEFPDAVRTLLARFEQQARVLTHLQLEGEGLPLNPEQQLQVIFILQEALS 552 Query: 509 NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI---RSNHYGMIIMRDRAQSLRG 565 N KH+ A +V V + +N ++ + D+G G ++A+ ++ H G+ IMR+RA + Sbjct: 553 NIRKHAAAGKVEVNI-RNGQDFEMDIVDDGYGFDQSALAARQARHVGLSIMRERATRIAA 611 Query: 566 DCRVRRRESGGTEVVVTFIPEKTF 589 + R GT V + ++ Sbjct: 612 TVDIMSRPGEGTRVSLVLPHKERA 635 >UniRef50_B9Z081 Multi-sensor signal transduction histidine kinase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z081_9NEIS Length = 645 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 141/625 (22%), Positives = 251/625 (40%), Gaps = 50/625 (8%) Query: 9 LTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSE 68 L ++ +L + L+ + + WL ++G A AIN AGSLRM++ RL V Sbjct: 15 FRLSAKIIGALLAVLLMALSAIGATLWLSWQLEGGAAAINDAGSLRMRATRLSLDVQRFH 74 Query: 69 KDKPLIKEMEQTAFSAELTRAAERDGQLAQ-------------LQGLQDYWRNELIPALM 115 K + ++ + + T A R G A+ + + D W + P Sbjct: 75 DGKLPREVVQNSIVRYDQTLAVLRRGDSARPLLVPRTAKILLDFKNVADQWHGRIRPLGQ 134 Query: 116 R---------AQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALL 166 Q+ + S +V +++ V+ + E + ++A + Sbjct: 135 AILAAGSEASPQSIARFQSMTSDYVDLINRFVADMEAYNARNTEYLRYCQLMLAALAVVG 194 Query: 167 LVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAES 226 V I + +L P +L ++ + +E A + N M+ LAE+ Sbjct: 195 TVALIYMMMLLVLNPLDKLHQGIQLLAEGQLDVSVPVESDDEFAQVSQGFNLMAQRLAEA 254 Query: 227 YAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIEL 286 A LE+RV+ KTA L+ KN+ L+ L++ + L+ L L + + Sbjct: 255 RATLEERVRAKTASLQQKNKELALLYEISAFLNQPQSLESLCQGFLAKVMAAYRADGGAV 314 Query: 287 RVYDTDDEENH------QEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTL---------- 330 R+ D + + + C G LC R TL Sbjct: 315 RLTDHEQGIVYVVADQGMPEALLKEEHCMRVGDCLCGEVAEHSSSRVETLSVADNKSCSR 374 Query: 331 -------KWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQ 383 + + G+ Q ++ Q +L++ L + L + R +++ Sbjct: 375 EGYRVISAFPITVQGRSLGLFNLHYRQSVIMTPQQTRLLEVLGQNLAVAIENQRLFAKER 434 Query: 384 QLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD-ALPESSRELLSQIRNELNASW 442 +L V+EER +A+ LHDSIAQ LS + +Q L+ E + + I + S+ Sbjct: 435 ELAVLEERNLVAQGLHDSIAQGLSFLNLQAQMLRQALQLGDKELLDDTVGLIETGIKESY 494 Query: 443 AQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQI 502 +RELL FR +L+E L A+ E + + G V+L + + Q + +L I Sbjct: 495 DDVRELLNNFRSKLSE-SLMQAISTVLERFRRQTGIKVELRSEGLTVPLMPEQQLQILFI 553 Query: 503 AREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS---NHYGMIIMRDR 559 +E LSN KH+QA++VVV + + + +L ++DNG G + H+G+ IM++R Sbjct: 554 LQEVLSNVRKHAQATQVVVHLKDDGSAFELDIKDNGVGFAMATVAGKADTHFGLSIMKER 613 Query: 560 AQSLRGDCRVRRRESGGTEVVVTFI 584 A R+ + GT V + Sbjct: 614 AARAGVALRISSQPGRGTSVHLHLP 638 >UniRef50_P44604 Sensor protein narQ homolog n=30 Tax=Gammaproteobacteria RepID=NARQ_HAEIN Length = 567 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 153/586 (26%), Positives = 276/586 (47%), Gaps = 39/586 (6%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEK 69 ++ ++A + + + ++S ++ + A AIN +GSLRMQSYRLL + + Sbjct: 6 SVSTRIAKYLFIILIVAGVISSLSLAIMSSNKYDAEAINISGSLRMQSYRLLYEMQEQPE 65 Query: 70 D-KPLIKEMEQTAFSAELTRAAE----RDGQLAQLQGLQDYWRNELIPALMRAQNRETVS 124 + ++ + S+ L + Q + W N + R Q+ + S Sbjct: 66 SVETNLRRYHISLHSSALLEVQNQFFTPNVLKHSYQNILQRWTN--MEKYARQQDVKNYS 123 Query: 125 ADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQ 184 ++ +VA +D V R +E + V V + + L++ + I + +++P Sbjct: 124 KQLTDYVADVDYFVFELQRFSEQKWILGVSVLGFAMLLILLMVSYVIWYTNREVVKPLHL 183 Query: 185 LLAMASAVSHRDFTQ-RANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEH 243 + + V R F + +NE+ L MS EL + Y+ LE+ V EKT L Sbjct: 184 MTKASMQVQMRQFNHIPLDTRKQNELGTLARVFTQMSTELGQLYSRLEEAVNEKTQKLRQ 243 Query: 244 KNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQ 303 N+ LS L+Q+ + L++ + L+ VLN + L +++ V + H + T Sbjct: 244 TNRTLSTLYQSAQLLNTNTINDKILNQVLNYIFISDHLNFVKVEVMGAE----HWDITLG 299 Query: 304 PDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVD 363 D +L + + L W+ L +++ Sbjct: 300 KQ----DANNELQIETLSVDNEELGVLSWQAG------------------LPCPDPRIMQ 337 Query: 364 TLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDAL 423 L + L L ++ +++QL++MEER+ IARELHDS+AQ LS +++Q++ L+ Sbjct: 338 NLAQMLARALYFHKNLRQKEQLLLMEERSIIARELHDSLAQVLSFLQIQLTLLKHNLKKE 397 Query: 424 PESSRE----LLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFP 479 E S+E +++ L+ +AQLRELL TFRL + E L+ AL+ + ++ Sbjct: 398 DEQSKEKSLAIIANFEQALSGGYAQLRELLATFRLTIQEANLQLALKQVIDSLRSQTTMQ 457 Query: 480 VKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN-DNQVKLTVQDNG 538 + ++ QLP + + Q +H+LQI REA +NA+KHSQ + + ++ N + + ++ V+D+G Sbjct: 458 MNVNCQLPSQSLNPQQLVHVLQIVREATTNAIKHSQGTVIEISARINAEGEYEILVEDDG 517 Query: 539 CGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 G+P HYG+ IM +R + L + RRE GGT+V +T Sbjct: 518 VGIPNLEEPEGHYGLNIMAERCRQLNAQLHIHRREQGGTQVKITLP 563 >UniRef50_C4K985 Histidine kinase n=1 Tax=Thauera sp. MZ1T RepID=C4K985_THASP Length = 637 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 184/611 (30%), Positives = 296/611 (48%), Gaps = 32/611 (5%) Query: 4 RCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAA 63 R L +++ V++ ++ T IGLAGM+ S +V + S AI A +LR + R+ Sbjct: 7 RLLVRRSIMLLVSVALVAMTLIGLAGMSASFVVVDRSRDSVQAIAVASTLRGHTQRIANL 66 Query: 64 VPL---------SEKDKPLIKEMEQTAFSAELTRAA---ERDGQLAQLQGLQDYWRNELI 111 + + SE+ + + ++E+ A L R + A +G+Q W + Sbjct: 67 IAIDALKGRIGVSERTRAAMADIERELQQAALRRFVDEAPGELFAATYRGVQAGWERSVR 126 Query: 112 PALMR--------AQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFM 163 P + A+ ET+ A V FV +D LV+ + E RI+ + + + A Sbjct: 127 PRIEALAGPVPPDAREVETLLAGVDDFVGQVDSLVAVLGQENERRIDELRRILALAAAVT 186 Query: 164 ALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAEL 223 +++ I+ L+ LL+P LL A ++ DF R +G +E+ +G+A N M+ EL Sbjct: 187 LGVVLVVIVLLQRALLRPLGGLLDAARRIAGGDFGVRVRYTGEDELGQVGSAFNLMADEL 246 Query: 224 AESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRD 283 A Y +LE RV EKTA L+ N+ L L+ A RL+ + L + + L Sbjct: 247 ARHYHLLELRVTEKTAELQRSNRSLELLYHAIARLYQAPSAPDAYEATLRDIDRVAGLEG 306 Query: 284 IELRVYDTDDEENHQEFTCQPDMTCDDK-------GCQLCPRGVLPVGDRGTTLKWRLAD 336 + + + + C+ G T L++ L D Sbjct: 307 SFVCIEPRPGAPAAVIASSMGPCPDRAERGEDACAACRAGSEGQALALLSPTLLRFPLRD 366 Query: 337 SHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIAR 396 +G+L +L G L Q+QLV+ L + L R E+++ L + EER+ IAR Sbjct: 367 REHHHGMLRLSLSDGARLEDWQRQLVEALSRHIGMALGAARRTEQERLLALQEERSVIAR 426 Query: 397 ELHDSIAQSLSCMKMQVSCLQMQG--DALPESSRELLSQIRNELNASWAQLRELLTTFRL 454 ELHDS+AQ+LS MK+QVS LQ A + +L+ +R ++A++ QLRELL +FRL Sbjct: 427 ELHDSLAQALSYMKIQVSLLQRALADPARTAEAEPILADLREGISAAYRQLRELLVSFRL 486 Query: 455 QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHS 514 L+ L +E + EY + G V+L +L + +Q +H+LQI REALSN ++H+ Sbjct: 487 GLS-ADLATLMEDAAREYGTRGGLEVELAVELGACQLSPNQEVHVLQIVREALSNMVRHA 545 Query: 515 QASEVVVTVAQN-DNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGDCRVRRR 572 A V + D +V L V+D+GCG+ A NH+G+ IMR+RA+S+ G+ + Sbjct: 546 SARHAWVALRGGADGEVLLEVRDDGCGIGAPPADARNHHGLAIMRERARSMGGEIDIGPA 605 Query: 573 ESGGTEVVVTF 583 GT V V F Sbjct: 606 LPSGTRVCVRF 616 >UniRef50_A0KIL7 Nitrate/nitrite sensor histidine kinase NarQ n=2 Tax=Aeromonas RepID=A0KIL7_AERHH Length = 570 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 158/582 (27%), Positives = 262/582 (45%), Gaps = 34/582 (5%) Query: 8 PLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLS 67 + + LI+ +++ I + M + V A AIN +GSLRMQ+YR+ + Sbjct: 11 SSAIGRSMVLILFMASLIAVVAMVTLFYSVP----DAKAINLSGSLRMQAYRMAYEIEQG 66 Query: 68 EKDKPLIKEMEQTAFSAELT---RAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVS 124 ++ + + EQT +AEL R + W+ ++ + + Sbjct: 67 QQVLSRLDQFEQTLHAAELQETQRWITPASLRRTYGEVLQQWQ--VMREHIENATPRRYT 124 Query: 125 ADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQ 184 + QFVA +D V+ E ++ + L + + + + FT+ + R +++ P Q Sbjct: 125 DNTEQFVAAIDDFVNQMQYHVEFKVRMLALAEGLGLLSIITIAWFTVRFTRQQVVAPLNQ 184 Query: 185 LLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHK 244 L+ A + ++F NE+ L A M+ EL + Y LE +V+EKTA L+ Sbjct: 185 LVYCARQIQRQEFNLTLPPYCENELGELSGAFVTMADELGKLYRELESKVEEKTAKLQQA 244 Query: 245 NQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQP 304 N LSFL+ ++LH+ L +L + I L E P Sbjct: 245 NDTLSFLYSTAQKLHAAPLSRRTLLKLLERAAAHQHIDYIRL---------TRFEHNAMP 295 Query: 305 DMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDT 364 D KG GD + + L +YG L ++L+ Sbjct: 296 DYITGRKGWP---------GDLDAVVSFYLQMDEQEYGRLDVISSHPI-----DERLMKN 341 Query: 365 LVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQM-QGDAL 423 L L D+ + Q+L++MEERA IARELHDS+AQ+LS +K+Q + L+ Sbjct: 342 FSMLLAQVLHKDQTLLQHQRLLLMEERAVIARELHDSLAQALSYLKIQSTLLKRFFAKGD 401 Query: 424 PESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLD 483 + + QI L +++ QLRELL TFRL + + L A++ E+ + ++L Sbjct: 402 TVKAEAAMQQIDEGLGSAYTQLRELLGTFRLSIGDANLGEAIKVMLEQLKPQTQADIRLH 461 Query: 484 YQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ-NDNQVKLTVQDNGCGVP 542 Y L + + Q IH+LQ+ REA+ NA+KH+ A + V+ D +++ + D+G G+ Sbjct: 462 YGLADTDLEAGQHIHILQLIREAVLNAIKHASAQVIDVSCETLADGNIQVQISDDGVGIG 521 Query: 543 ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 + NHYG+ IM +RA L G + R GT V +TF Sbjct: 522 IASSAVNHYGLSIMNERASKLHGLLTISERPPRGTCVHLTFP 563 >UniRef50_C5T4I9 GAF sensor signal transduction histidine kinase n=2 Tax=Acidovorax RepID=C5T4I9_ACIDE Length = 653 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 136/615 (22%), Positives = 246/615 (40%), Gaps = 45/615 (7%) Query: 11 LVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKD 70 L ++ + + LA + ++ W+ ++G A A+N+AG LRM R++ V +E Sbjct: 22 LTFKLLAMGGGFLLVALASIGLTLWVAWKLEGGAAAVNEAGRLRMNMLRMVL-VQQTESP 80 Query: 71 KPLIKEMEQTAFSAELTRAAERDGQL---------AQLQGLQDYW---RNELIPALMRAQ 118 + + + Q S EL R + L + + ++ W R E L Sbjct: 81 EEVQRHARQFDASLELLRTGDPSRPLFVPWGADTRERFEEIRTTWGGLRKEWAVGL--PP 138 Query: 119 NRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARL 178 +R A FV +D V + + + M + + + Sbjct: 139 DRARSLAQADSFVHKVDGFVEAIEIQIAGWTAVLHIFQLSMMAVAIAAAITFMAVSYLLV 198 Query: 179 LQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKT 238 L P QL + + D R + +E L N M+ L S+ LEQ+V+EKT Sbjct: 199 LNPVSQLQQAQARLRQGDLGVRLPVEADDEFGQLSAGFNLMAHALQASHEELEQKVREKT 258 Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEE--- 295 A + +NQ L+ L++ + S L + ++ + +R D +E Sbjct: 259 ANIAVQNQRLAALYEVSALASSATGLEALAQGFVKQIRRVAGADAAAVRWSDEANERYVL 318 Query: 296 ---NHQEFTCQPDMTCDDKGCQLCPRG-------VLPVGDRGTT-------------LKW 332 + + C G +C + V+P+ T + Sbjct: 319 LAGDGMPVAMTEEEHCLHTGACMCGQPQSQARTRVIPIVPSTTLAFPHCRDAGFQTMVAI 378 Query: 333 RLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERA 392 + G + + + + L++ + L + + R +++ V EER+ Sbjct: 379 PVQMQQRLLGEINLFFRSPTAHTDEVRDLLEAMTRHLASAMEGLRATALEREAAVAEERS 438 Query: 393 TIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSREL-LSQIRNELNASWAQLRELLTT 451 +ARELHDSIAQSL+ +K+Q L+ +R+ + ++ + +A +RELL Sbjct: 439 LLARELHDSIAQSLAFLKIQTQLLRDAVAKGDVVARDRSMGELDVGVRECYADVRELLVH 498 Query: 452 FRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNAL 511 FR + +E + AL A+ ++ + G L +P I +L + +EALSN Sbjct: 499 FRTRTSEEDIEAALRATLSKFEHQTGIATTLTMAGHGLPLPPDVQIQVLHMVQEALSNVR 558 Query: 512 KHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN--HYGMIIMRDRAQSLRGDCRV 569 KHS A+ V + V ++ + + V DNG G +A+ + H G+ IMR+RAQ + +V Sbjct: 559 KHSGATRVELHVHRHP-RWRFEVLDNGTGFRVDAVPPDSLHVGLGIMRERAQRIGAVVQV 617 Query: 570 RRRESGGTEVVVTFI 584 G V + Sbjct: 618 ESSPGEGARVCIELP 632 >UniRef50_B8EB80 Histidine kinase n=20 Tax=Shewanella RepID=B8EB80_SHEB2 Length = 611 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 167/592 (28%), Positives = 272/592 (45%), Gaps = 38/592 (6%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLL-AAVPLSE 68 +L +++ ++L+ + + + + G A AIN +GSLRMQSYRL+ A S+ Sbjct: 10 SLTSKILGLMLVLILLSSSLSTFAIINLSYSLGDAKAINASGSLRMQSYRLMFYANSGSD 69 Query: 69 KDKPLIKEMEQTAFSAELTRAAE---RDGQLAQLQGLQDYWRNELIPALMRAQNRETVSA 125 + I E E T +S L + Q Q + D W ++ + +N A Sbjct: 70 AAQDKITEFENTLYSDTLKPSDSWFSPRKIADQYQLVIDKWL--VMKYYIEQENSRDYVA 127 Query: 126 DVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQL 185 + FV +D LV + ++ + + M ++ + + + +++ P ++L Sbjct: 128 SLKDFVDTIDLLVLEMEHHAAFKLRLLAASQILGLSVMLIIAFVAVRFTKKKVVIPLQKL 187 Query: 186 LAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKN 245 + A+ +S +F + E+ L AL + ELA Y LE +V EKT L N Sbjct: 188 MESANTISKGNFEIEMPETEYIELTALTHALQKTAKELAMLYGDLESQVAEKTLALTRAN 247 Query: 246 QILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPD 305 L+FL+ L++ + L LN L+ L + L + + E E Sbjct: 248 NELAFLYDNLLTLNANKLDYKALKAALNQLKGYESLDYLRLIIQYPEQELEVIE------ 301 Query: 306 MTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTL 365 G P + +T ++ L G L Q +++ L + Sbjct: 302 -----------ADGGWPEVTQNST-RFPLQFEQANLGYLELIADQTPNIA-----LFNNF 344 Query: 366 VEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA--L 423 LT ++ + E++QQL +MEER IARELHDS+ Q LS +K+Q+S L+ D Sbjct: 345 AIMLTRSIVIHNATEQRQQLALMEERGVIARELHDSLGQVLSFLKIQISLLRKNLDHSCR 404 Query: 424 PESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLD 483 + L++I ++ ++ QLRELL+TFRL + EP L+ ALEA E+ K + LD Sbjct: 405 NPTIEAQLTEINEGVSTAYVQLRELLSTFRLTIKEPDLKSALEAMLEQLRTKTSIKITLD 464 Query: 484 YQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND-NQVKLTVQDNGCGVP 542 Y+L P+ + + Q IH+LQI REA NA+KH++AS + + ++D V + V DNG G+ Sbjct: 465 YKLAPQWLEAKQHIHILQITREATLNAIKHAEASLINIHCYKDDEGMVNINVCDNGIGIG 524 Query: 543 ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQG 594 R H+G+ IM +RA L G E + F P T QG Sbjct: 525 HLKERDQHFGIGIMHERASKLSGKVVFSDNE------ISRFKPATATTIEQG 570 >UniRef50_A1W358 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=7 Tax=Burkholderiales RepID=A1W358_ACISJ Length = 638 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 145/628 (23%), Positives = 251/628 (39%), Gaps = 51/628 (8%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEK 69 TL ++ + + + LA + + W+ ++G A A+N+AG LRM R++ A +E Sbjct: 6 TLSTKLLAMGTVFLLVALASIGFTLWVTWKLEGGAAAVNEAGRLRMNMLRMVLA-QQNES 64 Query: 70 DKPLIKEMEQTAFSAELTRAA---------ERDGQLAQLQGLQDYW---RNELIPALMRA 117 + + + EL R D + + ++ W N+ A Sbjct: 65 PQEFARLETRFNEGLELLRTGDPARPLFVPWSDDTRERYEHIRRQWLLIENDWKAAAHYE 124 Query: 118 QNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRAR 177 + E V A FV LD V + + L H M V + Sbjct: 125 SSAEAV-ARADAFVLDLDSFVEAIEIQIVRLTAVLHLFHLFMVALAIGSAVAFMALSYLL 183 Query: 178 LLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEK 237 +L P +L + + D R + +E L N M+ L S+ LE++V+EK Sbjct: 184 VLNPVTRLQQALARLRKGDLGTRLEVEADDEFGQLTAGFNLMAHALQTSHEDLERKVREK 243 Query: 238 TAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENH 297 TA +E +NQ L+ L+ + L E + ++ + +R DE N Sbjct: 244 TATIEVRNQRLAALYAVSALAAEAGSLEELTQGFVQQIRRVAECDAAAVR---WSDEANE 300 Query: 298 QEFTCQPDM---------TCDDKGCQLCPRG-------VLPVGDRG-------------T 328 + D C G C + V+P+ G T Sbjct: 301 RYVLLASDGLPQSLVEHEHCVVTGACECGQAQGQARMRVIPIMPVGGLQLPHCREAGFET 360 Query: 329 TLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVM 388 + + G + LS + ++L+ T+ L ++ R +++ V Sbjct: 361 VVSIPVQMHQRLLGEVTLLYRSPLELSAEMRELLSTMAHHLATSMESLRASALEREAAVA 420 Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSREL-LSQIRNELNASWAQLRE 447 +ER+ IARELHDSIAQSL+ +K+Q L+ +R+ ++++ + +A +RE Sbjct: 421 QERSLIARELHDSIAQSLAFLKIQTQLLRDAVAKDNTEARDRSMAELDTGVRECYADVRE 480 Query: 448 LLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 LL FR + + + AL A+ ++ + G L + I +L I +EAL Sbjct: 481 LLVHFRTRTQDEDIEAALRATLSKFEHQTGAATALSMAGHGLPLAQDVQIQVLHILQEAL 540 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN--HYGMIIMRDRAQSLRG 565 SN KH+ A V + V ++ + + VQD+G G +++ + H G+ IMR+RAQ + Sbjct: 541 SNVRKHADARRVELRVQRHP-RWRFEVQDDGRGFDPDSVPPDSLHVGLGIMRERAQRIGA 599 Query: 566 DCRVRRRE-SGGTEVVVTFIPEKTFTDV 592 + R GGT VV+ P Sbjct: 600 HLELVSRPGGGGTCVVLELPPTTREEPA 627 >UniRef50_A6FC55 Hypothetical nitrate/nitrite sensor protein NarQ n=1 Tax=Moritella sp. PE36 RepID=A6FC55_9GAMM Length = 572 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 144/577 (24%), Positives = 275/577 (47%), Gaps = 43/577 (7%) Query: 20 LLSTAIGLAGM--AVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEM 77 + + + LA M +S + A +INKAG+LRMQSY++ A LS + L+++ Sbjct: 19 GMFSILALASMLTFISLVALSLSLSDASSINKAGALRMQSYQI--AYNLSRDESELMRQG 76 Query: 78 EQTAFSAELTRAAE--------RDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQ 129 F+ L + ++ W+ + ++ + N E V + Sbjct: 77 HIDTFNQSLAHIKNNIVDNWDISSKLKQEFIIVETQWQKQ--SDILHSDNPEQFLLYVDE 134 Query: 130 FVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMA 189 FV+ +D V +E +++ + L+ + + + + TI ++ ++L+P +Q+ A + Sbjct: 135 FVSEIDTFVQNLQNHSEYKVKVITLIKGLGIGLIFAVCIITIRLMQVQVLKPLQQIFAAS 194 Query: 190 SAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILS 249 + + +F + NE+ L + +++M+ +L + Y+ LEQ+V KT L+ ++ Sbjct: 195 NRIRKGEFDVSFDFFYENEIGSLASNISHMANDLNQLYSTLEQQVDAKTKQLKEAKDKIN 254 Query: 250 FLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCD 309 FL+ +++LH + L L + L L L + ++ E T + D Sbjct: 255 FLYTTSQKLHVTHLNADMLEQTLQSVSELNGLSFYNLILTGSEVE------TIYLNAGAD 308 Query: 310 DKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQL 369 + T+ +L +G L + + Q+ + + + Sbjct: 309 NGE---------------QTIDLKLELEEQSFGTLTVLKREA-----NDQEHLRSYCRII 348 Query: 370 TATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG--DALPESS 427 + + Q+ ++MEERA IARELHDS+AQ+LS +K+QV+ L+ + ++ Sbjct: 349 SRAQHRSQSNLEAQRSLLMEERAVIARELHDSLAQALSYLKIQVALLKRHLKNQEVTPTT 408 Query: 428 RELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLP 487 E++ +I L S+ QLRELL TFRL L + L A+ + + + L Y+L Sbjct: 409 NEIVEEIDVNLRVSYTQLRELLNTFRLTLDDANLSEAISIMLAQLRQRTKSKIHLSYELE 468 Query: 488 PRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTV-AQNDNQVKLTVQDNGCGVPENAI 546 L +Q IH+LQI REA+ N++KH+ ++E+++ + +++++ D+G G+P + Sbjct: 469 EHLFKPNQHIHILQIIREAVLNSIKHANSNEIMIDCGTNKNGTIEVSISDDGDGIPADPT 528 Query: 547 RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 +SNHYG+ IM +RA L ++ GT V++TF Sbjct: 529 KSNHYGLTIMDERASKLGAKLEIKNNIIKGTSVLLTF 565 >UniRef50_A9LZC9 Two-component system, NarL family, nitrate/nitrite sensor histidine kinase n=9 Tax=Neisseria RepID=A9LZC9_NEIM0 Length = 536 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 125/552 (22%), Positives = 233/552 (42%), Gaps = 32/552 (5%) Query: 53 LRMQSYRLLA-------AVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLA----QLQG 101 +RMQ+YRL + + K + + + S + D LA Q Sbjct: 1 MRMQAYRLAYMAGEGSPRSQIDNQVDEFEKSLNRISQSDAIHPLIPSDTPLAYDLIQSML 60 Query: 102 LQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAV 161 + D W+ ++P L R D+ +F ++ + + E + + + Sbjct: 61 IID-WQAHILPPLQSY--RRPTQVDLYRFAGNIELFLQALENANEKNTWWLRRFQWAIML 117 Query: 162 FMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSA 221 + V + W + +++P + L A + R F G E +G N M Sbjct: 118 MTLVSSVLMLFWHQIWVIRPLQALREGAERIGRRCFDIPVPEGGTPEFKQVGRCFNQMGG 177 Query: 222 ELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLL 281 L Y LE +V E+T LE +NQ L+ L+Q R LH + LN + Sbjct: 178 RLKILYDDLEGQVAEQTRSLEKQNQNLTLLYQTTRDLHQSYIPQQAAEHFLNRILPAVGA 237 Query: 282 RDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQY 341 + + D ++ C + + + + + Sbjct: 238 DSGRVCLDGGSDVY----------VSIHHADCGTAASDLGKYHEE----IFPIEYQNETL 283 Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 G LL + P G L D + L+ TL QL +LA + +E ++ L V++ER IA+ LHDS Sbjct: 284 GRLLLSFPNGISLDEDDRILLQTLGRQLGVSLAGAKQEEEKRLLAVLQERNLIAQGLHDS 343 Query: 402 IAQSLSCMKMQVSCLQMQ-GDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPG 460 IAQ+L+ + +QV L+ + E + E + I+ + + +RELL FR +++ Sbjct: 344 IAQALTFLNLQVQMLETAFAENKREEAAENIGFIKTGVQECYEDVRELLLNFRTKISNKE 403 Query: 461 LRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVV 520 A+ ++ + G V+ ++ L + + ++ I +E+LSN KH++A+ V Sbjct: 404 FPEAVADLFARFTQQTGTTVETVWENGTHLPTQDEQLQMIFILQESLSNIRKHARATHVK 463 Query: 521 VTVAQNDNQVKLTVQDNGCGVPEN---AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 T++++ + +T+QDNG G +H G+ IM++RA+ +R ++ + GT Sbjct: 464 FTLSEHGGRFTMTIQDNGQGFDTEKIGEPTGSHVGLHIMQERAKRIRAVLKIYSQPQQGT 523 Query: 578 EVVVTFIPEKTF 589 V + + E++ Sbjct: 524 TVSLAGVSEESL 535 >UniRef50_A5WD78 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WD78_PSYWF Length = 640 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 155/635 (24%), Positives = 290/635 (45%), Gaps = 56/635 (8%) Query: 7 SPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL------ 60 P TL + + L + L SG+L Q A AIN AGS+RM +YR+ Sbjct: 3 IPNTLAVRSWIATTLIILLFLGTALSSGFLAWAAQNDAKAINTAGSIRMATYRMNFLLVA 62 Query: 61 --------LAAVPLSEKDKPLIKEMEQ--TAFSAELTRAAERDGQLA-QLQGLQDYWRNE 109 A + ++ LI +M Q + ++ +D ++ Q++ + W Sbjct: 63 NQSSAELRAADISSVQQINQLIDDMNQRQSLLQHYQSQRTNKDTRIYRQIERIHQGWTQT 122 Query: 110 LIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVF 169 L+P L+ + A + ++ +D +VS E R L+ + M L+++ Sbjct: 123 LMPLLLARDSVGFYKASLP-YIQQVDAVVSQLQYRNEQRQNRQQLLQLISMSLMILIMIG 181 Query: 170 TIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAV 229 I LR ++L P ++L+ +A + R +++G E LG + N+M + + ++ Sbjct: 182 GIYELRKKVLLPVKKLMQAKAAFTSGKLETRVHLTGYKEFEELGRSFNDMVSTIEQNKQF 241 Query: 230 LEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVY 289 LE+++ KTA L NQ+LS L+ + L + L+ ++ + + L + Sbjct: 242 LERQIALKTAHLTQANQVLSLLYDFAKYLTTSQVSITELNRLIADFGKIIPELEFTLCIK 301 Query: 290 DT--DDEENHQEFTCQPDMTCDDKGCQLCPR----------------------------G 319 D+++ + + C C C G Sbjct: 302 GDLIDNKDAIAIHSSELRDLCSTTTCDSCLIKSSFYTESFLIRHQKSQFGDLRVRPKSLG 361 Query: 320 VLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQ 379 + ++ T + R+ + + + L + + + L ++ + L + + Sbjct: 362 ISRPTEQATPSENRIPLVQVAQLDSMIDDTETQVLIANNKPAITALTNLISTAMFLLQQR 421 Query: 380 ERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA------LPESSRELLSQ 433 +++ Q+I++EERATIARELHDS+AQSLS +K+Q + L+ + + + + Sbjct: 422 QQEHQIILLEERATIARELHDSLAQSLSYLKIQTTILEKRLQHTHCDSPDLALVSDSIGK 481 Query: 434 IRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPS 493 +++ L +++ LR+LL TFRL L + AL S EE++ K GF VK+ Q+ + + Sbjct: 482 LKDGLTSAYQHLRDLLVTFRLSLNDDSFDEALHNSAEEFAKKGGFNVKVSNQVISLNLSA 541 Query: 494 HQAIHLLQIAREALSNALKHSQASEVVVTVAQ--NDNQVKLTVQDNGCGVPENAIRSNHY 551 + ++++QI REALSN +H+ A V V + N L++ D+G G+ + +++H+ Sbjct: 542 SEQVNVIQIVREALSNICRHANAKNVTVNFGYIADSNDTLLSISDDGKGLSGSFDQTHHH 601 Query: 552 GMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 G++IM++RA+SL G V E GT V F P+ Sbjct: 602 GLMIMQERAKSLGGQLTVSNNEPTGTVVEARFSPD 636 >UniRef50_A4BGQ5 Signal transduction histidine kinase, nitrate/nitrite-specific n=1 Tax=Reinekea blandensis MED297 RepID=A4BGQ5_9GAMM Length = 562 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 156/602 (25%), Positives = 277/602 (46%), Gaps = 51/602 (8%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 MLK P+ + + LI L A+ + W+ + G A A+N +GSLRMQSYR+ Sbjct: 1 MLKFARYPVASLLIIGLITLA--ALAAVSGLYTLWMTTVLSGDAKAVNLSGSLRMQSYRI 58 Query: 61 LAAVPLS---EKDKPLIKEMEQTAFSAELTRAAERDGQL--AQLQGLQDYWRNELIPALM 115 + E L+ E+ SA L D A ++ + A+ Sbjct: 59 AYLLEQDAPQEHIASLLDTFEERLTSAALKGQIPSDHPHLTAAFSTVEQRFEQMHTAAI- 117 Query: 116 RAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLR 175 + E +V FV +D +V+ + +E +++ + ++ + L + I + Sbjct: 118 --ETPEIYLQEVDAFVEDIDTMVAQLESWSENKVQNLREQQILITLLSLLAAILFAIIIN 175 Query: 176 ARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQ 235 R++ P ++L+ + D + R + GR+E L + LN M+ E+++ + LE +Q Sbjct: 176 RRVVLPLQRLIRTVHRIGRGDRSARVDFQGRDEFGRLASTLNRMADEISQVHGSLESTIQ 235 Query: 236 EKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEE 295 E+TA L N+IL FL+ ++RL + P L ELR+ + Sbjct: 236 EQTAELSRNNRILEFLFTLSQRLSTEKPDITALKHQSVE----------ELRLICPEHSI 285 Query: 296 NHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLS 355 N + + C D+ Y Q L+ Sbjct: 286 NWHQQMYETSPQGYVVRC----------------------DADQSY----LICEQRNGLT 319 Query: 356 HDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSC 415 Q+QL+ T+ + ++ + + ++ ++ ER++IARELHDS+AQ LS +K+QV Sbjct: 320 AWQKQLLQTVSDLFDNAISRMGAYDHENRIALLNERSSIARELHDSLAQQLSYLKIQVVR 379 Query: 416 L--QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYS 473 L + A E+ ++ ++R+ LN+S+ +LRELL TFR QL EPGL P+++A+ ++ + Sbjct: 380 LVKLRERQADEETLNSIIDELRDGLNSSYRKLRELLVTFRSQLDEPGLLPSVKAAIDDVN 439 Query: 474 AKF-GFPVKLDYQLP-PRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND-NQV 530 + L + P + Q IH + + REA++N +KH++A VV++ + N + Sbjct: 440 RMSPNCQIHLYIEDNWPETLTPSQEIHCMHVIREAITNVVKHAKAENAVVSMKRLPSNTL 499 Query: 531 KLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFT 590 ++T+ D+G G E + HYG+ IM +RA + G+ + GG V +TF + Sbjct: 500 QVTINDDGIGFGETLTKPMHYGLDIMAERAIRIGGNIDYKNLNHGGAGVTLTFPLNASEE 559 Query: 591 DV 592 D Sbjct: 560 DR 561 >UniRef50_C0DXM5 Sensor protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM5_EIKCO Length = 619 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 129/595 (21%), Positives = 221/595 (37%), Gaps = 25/595 (4%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEK 69 +L ++ +LL L ++++ ++ A AI + G L Q +RL A + Sbjct: 26 SLSARLLTAILLWAGGLLLFVSMTVVATWRLEERAGAIRQTGRLNDQVHRLTMAAVQNPG 85 Query: 70 DKPLIKEMEQTAFSAELTR-----AAERDGQLAQLQGLQDYWRNELIPALMRAQNRETV- 123 ++++ T + + QL+ + R + L A +T Sbjct: 86 APLPVQQVADTLKGLNSRQHAVCCTWWDEPASHQLEQV----RRDTEAFLQTAAKPDTAA 141 Query: 124 -SADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPW 182 + G+D + I + + + + L + LR +L+P Sbjct: 142 LLEQAERLHTGIDTYARLLEEQNTRSIGWLRSGRIGLMLLILLSAAVSFRLLRQVVLRPL 201 Query: 183 RQLLAMASAVSHRDFTQRAN-ISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGL 241 L + ++H R + +E + N M+ L E YA LE +V EKTA L Sbjct: 202 GTLYQAMNQITHGRLGTRIAGSNSGDEFEAVADGFNRMADNLQEMYAHLEDKVAEKTAAL 261 Query: 242 EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRV-------YDTDDE 294 + L+ LH ++ E L + L+ + D Sbjct: 262 SRQKSEWEMLYYVTSYLHKQSFGSEVEQAFLERMLRLSHSGGGGIFWLAEKGFTTACDIG 321 Query: 295 ENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHL 354 P ++ + + + + G L + P L Sbjct: 322 LLEGLAERLPHTHTAEQESEAGNMVWMQGEEGALVALVPIYALGGFQGWLALSKPTVPLL 381 Query: 355 SHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVS 414 S L+ L QL +QQ V+EER+ IAR LHDS+AQSLS + M+ Sbjct: 382 SAQNTGLMRLLCTQLGIARENAAMTLLKQQNAVLEERSRIARSLHDSLAQSLSFINMRFQ 441 Query: 415 CL-QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYS 473 L + + +S R+ + IR+ + + +RELL FR + + + E Sbjct: 442 MLSKNKLLPDDKSVRDNIEMIRDGIQYCYEDVRELLDHFRAKPQYGNFAETVRSVIERSR 501 Query: 474 AKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLT 533 + G PV L L+ S Q L I +EALSN KH+ A + V + N + + Sbjct: 502 KQAGIPVVLHISGGDCLLNSEQQTQALFILQEALSNIRKHADAQQAEVLLE-NGDGFTII 560 Query: 534 VQDNGCGVPE----NAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 V+D+G G A H G+ +M +RA+ + + +R R GTEV + Sbjct: 561 VRDDGQGFDPESRAEAEPGQHIGLSVMHERAEKIGAEISIRSRPGSGTEVRLHIP 615 >UniRef50_B2CI54 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Pantoea sp. MMB051 RepID=B2CI54_9ENTR Length = 515 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 166/586 (28%), Positives = 250/586 (42%), Gaps = 89/586 (15%) Query: 3 KRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLL- 61 + +S ++ +A + + + +S + Q A A+N AGSLRMQSYRL Sbjct: 9 EFSMSERSVTRSLARALFAIVLLAVFCSFLSLLTLSASQRDAEALNMAGSLRMQSYRLAW 68 Query: 62 ---AAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQ 118 A D + Q+ L A D A+ + L W+ L P L Sbjct: 69 DASAHPAALAADIASYQRSVQSPALLALRHAWVPDSVKARYRELLASWQ-SLQPELQTGD 127 Query: 119 NRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARL 178 +R +VS +V +D V R E++++ A LL F I L Sbjct: 128 SRR-FQQNVSLYVEQIDSFVLALQRWAELKMK---------LAVGACLLSFIAILL---- 173 Query: 179 LQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKT 238 L A MS EL + Y LEQ V+EKT Sbjct: 174 ---------------------------------LAKAFCRMSGELEKQYLWLEQAVKEKT 200 Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ 298 A L N+ L L+Q + L R + +NL+ + Sbjct: 201 AHLRQANRRLKLLYQCSEILRGHDKAYSRALALAKEHENLSAV----------------- 243 Query: 299 EFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQ 358 PR L VG T L W G +L S + Sbjct: 244 -------------ALSAPPRWQLSVGQEDTALAWHSLPLEQTIGGVLRW-----QASASE 285 Query: 359 QQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQM 418 QL+ L L +L LD +E+ + L++MEERATIARELHDS+AQSL +++Q++ L+ Sbjct: 286 PQLMKGLASMLARSLQLDEAEEKVRHLLLMEERATIARELHDSLAQSLVYLRIQMTRLKG 345 Query: 419 QGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGF 478 + ++S++ L + QLRELLTTFRL + L AL + + Sbjct: 346 IVGKESAPA-AIVSEVDAALAEANRQLRELLTTFRLSIEPADLATALAQVIAQLRPQTEA 404 Query: 479 PVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQ-VKLTVQDN 537 ++L P+ + +HQ +H+LQI REAL NA++H+QASE+ V VA+ + + +++ V DN Sbjct: 405 VIQLTGDTQPQHLNAHQQVHVLQIVREALLNAIRHAQASEIEVRVARPEEKLLQIEVNDN 464 Query: 538 GCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 G G + + HYG+ IM++RA+SL + + E GGT V + F Sbjct: 465 GQGFNQPGEKPGHYGLAIMQERAKSLGATLEIGQTEYGGTRVSLRF 510 >UniRef50_Q1ZGB4 Nitrate/nitrite sensor protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGB4_9GAMM Length = 549 Score = 339 bits (871), Expect = 1e-91, Method: Composition-based stats. Identities = 128/575 (22%), Positives = 252/575 (43%), Gaps = 34/575 (5%) Query: 21 LSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLI-KEMEQ 79 + I + + + +I+K G ++ +++LL A+ + PL+ E+E Sbjct: 1 MILLISVVHLLATFSTFDSHIADTRSISKLGEFKINTFKLLYALQNDPEKTPLLLAEIEN 60 Query: 80 TAFSAELTRAAERDGQL--AQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQL 137 T A+L +++ + L W++ + + F+ ++++ Sbjct: 61 TIRPAKLLKSSWFNTHSLNENSALLLARWQSIEEAFAQ--NDVAGAHVKLLYFIKSINRV 118 Query: 138 VSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDF 197 + + + ++ V L + + +A +F + + + +P QL ++ + Sbjct: 119 IDQYQTLADQKMTLVHLAEFIAFMLLACTGLFLYFYSKNYISEPINQLAKNVESIKKHQY 178 Query: 198 TQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRR 257 +NE +L + +M AE+ + + ++ +V +KT LE+ NQ ++FL +++ Sbjct: 179 DVNFPH-YKNEFGILAQGMRDMYAEIQQLISQMKTQVHQKTQELENANQTIAFLLSISQQ 237 Query: 258 LHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCP 317 L S L LN L L+ + + + + Q C C+ Sbjct: 238 LGSVKLTSPVLYDALNALVKQANLKRVCIELNNGT--------FIQSKSGCSGINCRNS- 288 Query: 318 RGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDR 377 ++ + + YG L + S +Q+ L+++ + L Sbjct: 289 -------------RFPIVINGKPYGFLNYY---SENESPEQRALIESFSVLIARALCQQE 332 Query: 378 HQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPES-SRELLSQIRN 436 + ++ Q++++MEER IARELHDSIAQSLS +K+Q + L Q + + + + I Sbjct: 333 NVQQTQKILIMEERNIIARELHDSIAQSLSFLKIQCTVLHQQVHQKEQQKALQSIHHIDE 392 Query: 437 ELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQA 496 ++ ++AQLR LL+TFRL T + A++ + + L ++Q Sbjct: 393 AISDAYAQLRSLLSTFRLTATHSNFKEAVQMLISTLQKQTSAQITLKEFSTHFYSAANQQ 452 Query: 497 IHLLQIAREALSNALKHSQASEVVVT-VAQNDNQVKLTVQDNGCGVPENAIRSNHYGMII 555 IHLLQI REA+ NA+KH+ + V+ + DN + +++ D+G G+ + NHYG+ I Sbjct: 453 IHLLQIVREAIINAIKHADCQHIDVSCLLTPDNNIWISIIDDGKGITNTSAIENHYGISI 512 Query: 556 MRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFT 590 M R+ + + S GTEV + F +K T Sbjct: 513 MEQRSDEIGATFSILPLAS-GTEVKLIFPYKKQHT 546 >UniRef50_B8GUD0 GAF sensor signal transduction histidine kinase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUD0_THISH Length = 550 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 111/469 (23%), Positives = 189/469 (40%), Gaps = 44/469 (9%) Query: 152 VVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAM 211 ++ + + V + + + + L+ P L A + R I E A Sbjct: 67 LLGIQSLFLVAGLAVTLTLPVLIYHHLITPLFHLRHWAQRARGGNLAARIPIPSTGEFAE 126 Query: 212 LGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPV 271 L +N ++ +L + V +T LE K+ L L+ +++ L + L+ Sbjct: 127 LAQDVNALTEQLQRLTREMRDEVSAQTERLEQKSHTLEVLYDVAASINTSRDLDDLLTRF 186 Query: 272 LNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGD------ 325 L L++ + R+ D H DD+ C R VLP+G Sbjct: 187 LTSLKHALGAQAATARLVTPD---GHMRLVANLGFEPDDQRC----RQVLPLGKCMCGRV 239 Query: 326 -RGTTLKW--------------------------RLADSHTQYGILLATLPQ-GRHLSHD 357 G L W L G+ L + HL+ D Sbjct: 240 ADGGDLSWKADIRQCGRVTSDCDTQEDEPAMITIPLQHRGKTLGVYSLFLHEWPEHLNED 299 Query: 358 QQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ 417 L+ ++ L + R E Q+L ++EER +A ELHDS+AQ+L+ ++ +V L Sbjct: 300 MDNLLTSIGRHLGMAIEKARVDEEAQRLGIIEERTHLAHELHDSLAQTLATLRFRVRALD 359 Query: 418 MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFG 477 +R + QI++ LN + +LR L++ FR + G A+E E + G Sbjct: 360 ETAQDASAETRREIDQIKDVLNRANVELRALISHFRAPMEPQGFVAAVEKMVETLRRETG 419 Query: 478 FPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN-DNQVKLTVQD 536 V L + PR +P+ +L+I +EAL N KH+QA V V + + + + + V+D Sbjct: 420 ISVYLQKEWRPRKLPAEMETEVLRIVQEALCNIRKHAQAQHVRVLLRNDAEGECMVMVED 479 Query: 537 NGCGV--PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 +G G+ E H G+ +M +RA L D R+ GT + + F Sbjct: 480 DGLGLQPAEQGAPGEHIGLSVMTERAARLDADFRIESEPGEGTRISLAF 528 >UniRef50_Q2Y9N2 Periplasmic sensor signal transduction histidine kinase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y9N2_NITMU Length = 692 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 100/474 (21%), Positives = 198/474 (41%), Gaps = 20/474 (4%) Query: 122 TVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQP 181 + A ++QF+ LD +++ E +L+ V+ F + R +L P Sbjct: 192 RIMAPINQFMLELDTRTRNKLSNLQLKFEQQILLILVVLCFALFFATLATFYTRRNILLP 251 Query: 182 WRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGL 241 L S ++ +++ R IS RNE+A LG N+M+ + L ++V+E L Sbjct: 252 LDYLRRQVSGIAQGNYSTRCAISTRNEIAELGAGFNSMAEAIEHEIIKL-RQVEE---SL 307 Query: 242 EHKNQILSFLWQANRRLHSRAP--LCERLSPVLNGLQNLTLLRDIELRVYD----TDDEE 295 + + ++ + R + S + +C+ ++ L L +++ + +D Sbjct: 308 RERLKEINCFYSIRRGMESSSLEEVCDTIATELIAAMQFPHLAGVKIEMDGKELVSDPYH 367 Query: 296 NHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLS 355 + Q +T + RG + + RG + L + ++ L GR L Sbjct: 368 GNHVHELQKQITVHGE-----IRGWIKLFYRGDRF-FLLPEEQNLIDVIGDDL--GRWLE 419 Query: 356 HDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSC 415 H Q + + ++L A R + + E+R IARE+HD + Q L+ + +++S Sbjct: 420 HQQTEARVLVEQELRVRDAAIREFAAHLERMREEDRKYIAREIHDELGQLLAALHLEISL 479 Query: 416 LQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAK 475 L+ D E + + + + + + R G+ AL E+ Sbjct: 480 LRSAKDHGSERLETIRHNMAELVEKAGQSVHNVAEHLRPASLGLGIESALTKLTSEFKKH 539 Query: 476 FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQ 535 G L P + Q + + +I +E+L+N +HS A+ V + + + ++V + + Sbjct: 540 TGIYCDLRLPEEPVNLDEDQTVAIFRIVQESLTNVTRHSGANRVEIRLFREKDEVIVEIC 599 Query: 536 DNGCGVPENAIRSN-HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 DNG G + + +G++ MR+RA +LRG + G V V+ IP + Sbjct: 600 DNGRGFDPESAKKGKSFGLVGMRERAAALRGYIAITSGPGQGALVRVS-IPLRR 652 >UniRef50_D1UN54 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UN54_9BURK Length = 610 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 99/455 (21%), Positives = 189/455 (41%), Gaps = 36/455 (7%) Query: 154 LVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLG 213 + +A +A L T++ L + P +L M ++ + R + +E+ L Sbjct: 158 AILATIAAVVATLYAATLVLLNGMVRSPINRLEEMVDRIAAGNLDVRCAVESDDELGRLA 217 Query: 214 TALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLN 273 +N M+ L ES A L + Q+ + +E+ + + L R E +P + Sbjct: 218 ARVNAMADRLRESTARLYESEQKYRSIVENALEGIFRLH--------RNGWLEEANPAMA 269 Query: 274 GLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDK--GCQLCPRGVLPVGDRGTTLK 331 L R + V E + + FT Q ++ G LP+ T+ Sbjct: 270 RLLGYDSARAL---VAAGTREPDKRPFTPQQVEGLFERLDGSGEIAELELPLARADGTVI 326 Query: 332 W-------------RLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRH 378 W + + + A HL + +L + E+ L Sbjct: 327 WVQLSARGVADSSGAIVRLDGFFADVTARRQALDHLRRHRDELQAEVAERKRTEQELRAS 386 Query: 379 QERQQQL------IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLS 432 +E ++L I EER IA E+HD + Q L+ +K+ +S LQM+ PE ++ Sbjct: 387 REELRELSWHLEVIREEERKRIALEVHDELGQLLTALKIDISLLQMRLAGNPE-AQGKTD 445 Query: 433 QIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVP 492 +R + + +R + R GL ALE ++++A++ + ++ Sbjct: 446 AMRELIERTMWMVRNVANHLRPAALNFGLVSALEWLAQDFNARYYIQCTVVTHGDEPVLE 505 Query: 493 SHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI---RSN 549 +A + +IA+E+L+N +H++AS VV+T+ + + L ++D+GCG +A+ + Sbjct: 506 DARATAIFRIAQESLTNVARHARASHVVLTLRSGEGFIDLEIRDDGCGFDRDAVSARQRG 565 Query: 550 HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 YG++ M +RA+ + G + S GT V + Sbjct: 566 SYGLLGMAERARLIGGALTITSGASTGTVVALRIP 600 >UniRef50_C0N6H4 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H4_9GAMM Length = 570 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 100/459 (21%), Positives = 184/459 (40%), Gaps = 46/459 (10%) Query: 141 FDRTTEMR--IETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFT 198 +E I +++ + V+ VF+++ L + + W L+P ++LL S D Sbjct: 136 MQEISERWLDIRSILALGLVIFVFVSIFLYWGVDWF----LRPLQRLLQALSGFERGDLH 191 Query: 199 QRANISGRNEMAMLGTALNNMSAELAESYAV------LEQRVQEKTAGLEHKNQILSFLW 252 R EM + N M L S A L ++ + L+H I Sbjct: 192 LRLPNFTLAEMNQISHTFNRMGQALELSTAENQRLAMLVRQSGDAILSLDHAGNITFCNS 251 Query: 253 QANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKG 312 A R S+ P+ + L L + I + + + EN + +PD + D Sbjct: 252 TAERLFASQTPILKG--ESLAHLGFANHYKQISHILENCESTENMETVLVRPDGSQVDLL 309 Query: 313 CQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTAT 372 P L+D+ + L+ TL L + QL T Sbjct: 310 LSTVP----------------LSDNEDRVIGLICTLRDITELKQ-----AEAARNQLRET 348 Query: 373 LALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLS 432 L +H + Q+ ER +ARELHD + Q L+ +K ++ + + Sbjct: 349 RLLAKHMDEAQEA----ERRHLARELHDELGQCLTAIKTDAVLIRNRTETTEPRVFNSAQ 404 Query: 433 QIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAK-FGFPVKLDYQLPPRL 490 I + + + + ++T R L + GL P LE + ++ +LD Sbjct: 405 AIIDTASHIYDVVHNMITRLRPSPLDDLGLVPTLEQCIASWQSRETTINFQLDVNGTLNN 464 Query: 491 VPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ----NDNQVKLTVQDNGCGVPENAI 546 + + + ++ +EA++NA++H+ ASE+ V V+ D+++ + +QDNG G+ Sbjct: 465 LNEIMNMTVFRVVQEAITNAVRHADASEIKVKVSAEQGSEDDKLIIDIQDNGKGMVVKDF 524 Query: 547 RSN-HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 S+ +G++ MR+RAQSL G + G +++T Sbjct: 525 HSDVDFGLLGMRERAQSLGGKFELNSEPGAGVRILITIP 563 >UniRef50_Q7N5B4 Similar to nitrate/nitrite sensor protein NarX n=2 Tax=Photorhabdus RepID=Q7N5B4_PHOLL Length = 410 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 113/352 (32%), Positives = 189/352 (53%), Gaps = 18/352 (5%) Query: 232 QRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDT 291 R + + L+ KN L FL Q++ +L + L E+L + + L L + ++ Y + Sbjct: 74 ARYKAEINALKQKNSYLDFLCQSHFKLQNCKLLPEKLQEIFSHLNRLIPFCEAKIIFYPS 133 Query: 292 DDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQG 351 QE+ + C P D ++W L D+ YG L + Sbjct: 134 Q-----QEYFFRNPHQC-------------PYFDMPLIMRWNLDDNIDSYGTLWIKTHRN 175 Query: 352 RHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKM 411 L+ D++ LV +V +T L + + Q Q ++ ER I+RELHDSIAQSLS +K+ Sbjct: 176 SDLTPDEKSLVQDVVTLMTNKLLRENQIQCQHQSMLAAERTAISRELHDSIAQSLSFLKI 235 Query: 412 QVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEE 471 QV+CL + D LP+ S L+ I++ELN ++ QLRELL TFR + + L+ +L+ E Sbjct: 236 QVNCLYIGSDNLPKQSLTSLNMIKDELNIAYRQLRELLATFRNEQPQCNLQESLQTLISE 295 Query: 472 YSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVK 531 ++ + GF ++ +Y+L + +P + HL+QI RE L+N KH+ A+ + + + D+++ Sbjct: 296 FNHRLGFNIEFNYRLTHQHIPDSYSKHLIQIIRECLNNCYKHANANWISIRIYPIDDKII 355 Query: 532 LTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 V DNG G+ ++ N +G+ IM+DR L G +++ R+ GGTEV + F Sbjct: 356 TVVSDNGQGINLDSANKNKFGLAIMQDRVSILGGQLQIKNRKHGGTEVEIQF 407 >UniRef50_B2AKD3 Putative multi-sensor signal transduction histidine kinase n=1 Tax=Cupriavidus taiwanensis RepID=B2AKD3_CUPTR Length = 608 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 94/444 (21%), Positives = 183/444 (41%), Gaps = 13/444 (2%) Query: 153 VLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAML 212 + +MA +A+L + + L+ + P L M +S D R + +E+ L Sbjct: 157 QAIFAIMAALLAVLYAASFLLLKRMVRSPVNGLEKMVDKISGGDLDARCEVKSGDELGRL 216 Query: 213 GTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVL 272 +N M+ +L S +L++ ++ + +E+ + + L QA + + + L Sbjct: 217 AVRINYMADQLRTSTLLLQKSERKYRSIVENAVEGIFLLDQAGNLAEANPAMAQLLGYDN 276 Query: 273 NGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKW 332 ++ D + + T D QL P+ + Sbjct: 277 ACDLTVSAESDGRPKSPFSLSLTATLFKTLNVDGEIRGLELQLSRLDGTPIWVQLNARGL 336 Query: 333 RLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVE-----------QLTATLALDRHQER 381 ++ +Y L T R + + QL +E +L A+ + Sbjct: 337 MGSEGSLRYLEGLLTDVTARKHALEDLQLQRDRLELEVSERKWTELELLASRERLQQLHA 396 Query: 382 QQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNAS 441 Q+ I EER IA E+HD + Q L+ +KM +S L MQ ++ ++R + + Sbjct: 397 HQEAIREEERKCIAMEIHDELGQLLTALKMDLSLLSMQLPTGSGVIQKA-EEMRELIEQT 455 Query: 442 WAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQ 501 +R +++ R GL ALE ++S P + P +P +A + + Sbjct: 456 IRIVRNVVSHLRPTALNYGLASALEWLAADFSRHTKIPCRFQSTHPEPNLPDPRATAIFR 515 Query: 502 IAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN-HYGMIIMRDRA 560 I +E+L+N +H++AS+V VT+A D +++ ++DNG G + R+ YG+ M +RA Sbjct: 516 IVQESLTNVARHAKASQVDVTLANTDAGIEVIIRDNGQGFNVVSARAGYSYGLHGMAERA 575 Query: 561 QSLRGDCRVRRRESGGTEVVVTFI 584 + + V + GT + + + Sbjct: 576 RLIGAQLEVHSKPDRGTLIRLRLL 599 >UniRef50_Q67S65 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67S65_SYMTH Length = 633 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 85/408 (20%), Positives = 145/408 (35%), Gaps = 40/408 (9%) Query: 212 LGTALNNMSAELAESYAVLEQRVQEKT-------AGLEHKNQILSFLWQANRRLHSRAPL 264 L + M LE +V ++T LE + L + + + Sbjct: 223 LSQEFHRM----NRLLDTLEDKVADRTDQLAQTVRALERRLAESEALHAVDEAISTAIHP 278 Query: 265 CERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTC---------------------- 302 E L + +T + + D T Sbjct: 279 DEVLQVIARESVRVTGGSSALVTLLTPDGSRQFVRATHGEGMEAYVGLELPMEGNLTSLV 338 Query: 303 ----QPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQ 358 +P + + + ++ G ++ + + G+L+ Q Sbjct: 339 LQTGKPHFSREPDRDPRLNQDLVRAGGWRDVIQAPIRTKNRTLGVLVVASRQPGRFDEQH 398 Query: 359 QQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQM 418 +L+ L Q + + +++ V+EER +ARELHDS+ Q L + + + Sbjct: 399 LRLLTLLANQAGRLIESSELHAKAREVAVLEERNRLARELHDSVTQVLFGLTLNLESAVG 458 Query: 419 QGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFG 477 D PE +R LL++ R + A++R L+ R L E GL AL + + G Sbjct: 459 LLDRKPEKARTLLTRSREMAGEALAEMRSLIFELRPAALQEKGLAMALSNHINLFRRRTG 518 Query: 478 FPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDN 537 V L R + L ++A+EAL+N KH++A V V + + L V D+ Sbjct: 519 VEVNLTLSGDER-LSPDVEFALYRVAQEALNNVAKHARARHVRVKLDLRPEEALLEVCDD 577 Query: 538 GCGVPENA-IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 G G A R +GMI MR+R L+G V GT + Sbjct: 578 GVGFDPTASARGASFGMIGMRERVSELKGSLEVISAPGQGTCIRARIP 625 >UniRef50_Q7NE94 Glr3986 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NE94_GLOVI Length = 655 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 77/258 (29%), Positives = 125/258 (48%), Gaps = 1/258 (0%) Query: 328 TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIV 387 T L L + G + R + +L L Q T + L R E+ ++ V Sbjct: 397 TMLIVPLVLADRVIGSFSVCSTEKRVFLSQEIELAQALAHQATLAVQLTRLAEQGRRSAV 456 Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRE 447 +EER +ARELHD++ Q L+ + +Q+ G A P R+ + + R S A+ R Sbjct: 457 LEERNRMARELHDTLMQGLAGIVVQLQAATDAGVADPLDGRDHIDRARTLARRSLAEARR 516 Query: 448 LLTTFRLQLTEPG-LRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREA 506 + R QL E G L AL ++ + + + P +P+ LL+IA EA Sbjct: 517 SVRALRPQLLEQGDLGQALADLLQQSIYDNHTEARCEVRGTPFALPAEAENQLLRIAGEA 576 Query: 507 LSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGD 566 LSNAL+H++A+ V V + QV+L V D+G G + + ++ +G++ MR+RA+ + D Sbjct: 577 LSNALRHARANRVHVELDYERPQVRLVVADDGRGFDPDRVGTDRFGLVGMRERAERIGAD 636 Query: 567 CRVRRRESGGTEVVVTFI 584 R+ GT V VT + Sbjct: 637 LRLESVPGQGTRVAVTLV 654 >UniRef50_C0N1R0 Histidine kinase domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N1R0_9GAMM Length = 615 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 146/603 (24%), Positives = 278/603 (46%), Gaps = 34/603 (5%) Query: 5 CLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAV 64 S TL ++ L++L + L A + +L+ + S A+ K ++ +R +A + Sbjct: 23 SFSRRTLYAKLMLLLLCISLTVLLMQAGTIFLLDYIPSSQAALEKIAIQKVYWHRQIANL 82 Query: 65 PLSEKDKP-----LIKEMEQTAFSAELTRAAERDGQ--LAQLQGLQDYWRN--ELIPALM 115 DK +++ ++ +D +A ++ ++ +N ++ + Sbjct: 83 DSDNGDKAGETLKAMQQQALDTSDPDVLWMLRQDSPDVVAAVRQVEREQQNFADIATLNL 142 Query: 116 RAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLR 175 RA + ++ V+ D+L R +E + + L+ + +F+ +V + R Sbjct: 143 RAAGQLRIADRVA---KSYDELTLALHRDSETKQSIIGLLQAISLIFVFSCIVALSLGAR 199 Query: 176 ARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELA--ESYAVLEQR 233 L++ LL A+ D R +E A+L + +SA++ ES R Sbjct: 200 RVLVERLDNLLRFI-ALKPHDAEPR---HATDEFAVLEQCASQLSAKVQSYESEVTWAHR 255 Query: 234 VQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDD 293 E T L F+ + + + +L L+ + L D Sbjct: 256 TSEHTRVLIRAQ---DFILRFIESVSEDVLSERTMLKMLYSLERSLGFSNTALIYTDDAA 312 Query: 294 EENHQE--FTCQPDMTCDDKGCQLCPRGVL-------PVGDRGTTLKWRLADSHTQYGIL 344 + + F+ Q +K + + P G++ + + + G+L Sbjct: 313 VISSERIIFSHQKPHNLTEKIFKELLQTGSITYDYTNPEGEKVSCMGMTFSGISNGVGVL 372 Query: 345 LATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQ 404 L + +GR L + ++++ L+ H E ++L V+EERA IARELHDS+AQ Sbjct: 373 LVEMDEGRFLEDSEVKVLEITTRLLSMVTKFQSHDEEGRRLAVLEERAAIARELHDSLAQ 432 Query: 405 SLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPA 464 SLS MK+QV+ LQ + A + +++ ++R L+ ++ +LRELLTTFR+ + GL A Sbjct: 433 SLSFMKIQVARLQAKSGAQQD---DVVKELREGLDNAYRELRELLTTFRVHMDLRGLGYA 489 Query: 465 LEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT-V 523 ++A+ +E+S + + D +L + ++ H+L + REALSN ++HS A V + + Sbjct: 490 IQATIDEFSQRSQLVISFDNRLVNCRLTVNEEFHILHVVREALSNIVRHSGADNVTILML 549 Query: 524 AQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 Q + +V+LT+ D+G G + +H+G IM++RAQ+L G+ V R GGT V ++F Sbjct: 550 LQKNGEVELTIDDDGVGFHPASDTYDHHGQAIMKERAQTLGGNVEVMARRFGGTRVRLSF 609 Query: 584 IPE 586 +P+ Sbjct: 610 MPK 612 >UniRef50_C5SBA0 Histidine kinase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SBA0_CHRVI Length = 554 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 98/426 (23%), Positives = 172/426 (40%), Gaps = 33/426 (7%) Query: 191 AVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSF 250 V + ++ + + + +++ EL + Y ++ RV +T L K L Sbjct: 108 QVCQGEPGASDTLTETGVLQGIAQDIRSLNEELTDLYDDMDNRVARQTRRLAQKTASLKI 167 Query: 251 LWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENH------------- 297 L+ +H + L L L+ + R +R+ D Sbjct: 168 LYDVAAGIHQAESVEALLLRFLRVLKEMINARAATVRLVLPDGTRRLIGSIGLNDDLVRE 227 Query: 298 -----------QEFTCQPDMTCDDKG--CQLCPRGVLPVGDRGTTLKWRLADSHTQYGIL 344 D+ CD+ C + + L + G+ Sbjct: 228 SDMTPVDLCLCGNVLAPGDILCDNDARYCSRIYGRRMFASSEVEVVTVPLEHRDERLGVY 287 Query: 345 LATLPQ-GRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIA 403 + + G D +L+ T+ L +A R +L ++EER +A ELHDS+A Sbjct: 288 TLFVDRPGLQGREDILELLFTVGHHLGVAIAKQRSDAEAHRLSIVEERNALAHELHDSLA 347 Query: 404 QSLSCMKMQVSCL--QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGL 461 Q+L+ ++ Q L + G +P +R L++IRN L+ + +LRELL +FR L GL Sbjct: 348 QTLASLRFQCRMLDDSLAGCPIPAEARNDLARIRNGLDEAHTELRELLASFRAPLDRRGL 407 Query: 462 RPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVV 521 PAL + + G V P + + + + LL+IA+EAL+N KH+QA V V Sbjct: 408 VPALAKLTQRLGRETGTHVLFQNDSRPFELSATEELQLLRIAQEALANIRKHAQAHTVRV 467 Query: 522 TVAQN-DNQVKLTVQDNGCGV---PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 + + + L ++D+G G + G+ I+ +RA+ + + R+ GT Sbjct: 468 LLTRESGGRHVLLIEDDGVGFSPPDAQSPPGERIGLSILEERARRIGAELRIESEPGEGT 527 Query: 578 EVVVTF 583 V V F Sbjct: 528 RVEVVF 533 >UniRef50_A8VTE1 Short-chain dehydrogenase/reductase SDR n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE1_9BACI Length = 633 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 95/609 (15%), Positives = 221/609 (36%), Gaps = 52/609 (8%) Query: 11 LVNQVALIVLLSTAIGLAGMAVSGWL-----VQGVQGSAHAINKAGSL-------RMQSY 58 +V + + L+S + + + + + + G A + G L MQS Sbjct: 25 IVAAIVSVALISLLVIRISVTDTMSVQLDERAKSISGDVAA--RTGDLLLTNNIYAMQS- 81 Query: 59 RLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQ 118 L+ + D + + + + + + +E + Sbjct: 82 -LVNDTINNYNDLEYVFILNED--NEVIVDTYPNHQVSTDIINANRVASDEYNHLITFQS 138 Query: 119 NRETVSADVSQFVAGLDQLVSGFDRTT--EMRIETVVLVHRVMAVFMALLLVFTIIWLRA 176 + + V G+D V R E I +V L + + ++ + ++ L Sbjct: 139 EAGVIRDAAAPVVKGMDATVRVGLRDDSLEEAISSVTLQIITFLILLIVVSLVVVMKLTR 198 Query: 177 RLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQE 236 + +P +L+ + + V+ + T R +E+ L + ++M L + A E V + Sbjct: 199 VITKPIDELVGLTNRVAKGEMTARITNYPSDEIGDLTESFHDMLNTLEHTEAEKENYVNQ 258 Query: 237 KTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEEN 296 + +N+ L L + + ++ + L L + D ++ Sbjct: 259 ----IITRNRELMLLNDLSDHPDTTKDFNAMMNRFVRDLVLELKLDSAAIEATIIDQKQT 314 Query: 297 HQ-EFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLS 355 P+M + C + + H + G + P+ L Sbjct: 315 FSYRAESCPEMNSNCLITCDCDCEKKQANVFNV---FSIFAHHNEIGQIKICSPE--QLD 369 Query: 356 HDQQQLVDTLVEQLTATLALDRH------QERQQQLIVM-------EERATIARELHDSI 402 +++D++ L + + +E +Q+++ +ER IARELHD Sbjct: 370 TYSHKILDSIANHLGTVIENNELTHEIKKKEEIRQMLLEKILTVQEDERKRIARELHDQT 429 Query: 403 AQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEP-GL 461 +LS + + + L+ PE + + +R + S + +L R + + GL Sbjct: 430 GHALSSILLGLKMLEDA--KTPEEVTKQIEALRKLTHQSIEDIHDLAWQLRPTILDKFGL 487 Query: 462 RPALEASCEEYSAKFGFPVKLDYQL-PPRLVPSHQAIHLLQIAREALSNALKHSQASEVV 520 + A+E +++ K + + + + +I +E+L+N K+++A+ V Sbjct: 488 KTAIERYIQDFQQKLDIDYDVLIKGIDTIRLTPEMETAIFRIVQESLTNIFKYAEANSVS 547 Query: 521 VTVAQNDNQVKLTVQDNGCGVPENAIRSN-----HYGMIIMRDRAQSLRGDCRVRRRESG 575 V + +N + + + ++D+G G + + + G+ M++R L G + + Sbjct: 548 VILLRNHDMISVIIEDDGVGFDVEKMMNKDPSKFNLGLHGMQERTSLLGGTFEIESEKGR 607 Query: 576 GTEVVVTFI 584 GT ++V Sbjct: 608 GTAIMVKLP 616 >UniRef50_A9WFF8 Histidine kinase dimerisation and phosphoacceptor region n=3 Tax=Chloroflexus RepID=A9WFF8_CHLAA Length = 466 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 98/391 (25%), Positives = 159/391 (40%), Gaps = 46/391 (11%) Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIEL------------ 286 A L N+ L L++ N+R+ S A L E L + L + Sbjct: 86 AALRESNERLELLYEINQRVASSATLDEVLDYAITLPARLVNAGAATIVLMDEQGQPYTA 145 Query: 287 RVYDTDDEENHQEFTC-----------QPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLA 335 RV D E + T QP + GC VLP+ + Sbjct: 146 RVTGIDAGELERARTAFLLRLMTSPPDQPVVLSPHLGCNWAACLVLPLVEHDA------- 198 Query: 336 DSHTQYGILLATLPQGRHLSHDQQQ-----LVDTLVEQLTATLALDRHQERQQ------Q 384 G + A L +G + +Q L+ T+ +LT + R ++R + Sbjct: 199 ---HPIGWIEAFLKEGPATLRETRQPVLQPLLATVAGELTEAVVNSRRRDRAIASIAAVE 255 Query: 385 LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQ 444 + ER IAR+LHD +AQSL+ M+M++ + PE RE + + L + Sbjct: 256 RAISAERTRIARDLHDGVAQSLAFMRMRIDLWEDWLTQEPERLREEFATFKANLRRQIEE 315 Query: 445 LRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIA 503 LR + R ++ + G AL E++ + + V +D+ P +P + + Sbjct: 316 LRRAIFALRPIEIGQLGFAGALRRFINEFAEQQDWDVSIDFAELPPDLPPVLELAAFRFV 375 Query: 504 REALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQS 562 +EAL+N KH+QA V + + D + + V+D+G G P + H G+ MR+RA + Sbjct: 376 QEALNNVAKHAQARRVWIKLGVRDQGLIIHVRDDGVGFNPGEEPPAGHLGLRQMRERATA 435 Query: 563 LRGDCRVRRRESGGTEVVVTFIPEKTFTDVQ 593 L G C + R GTEV V + T V Sbjct: 436 LDGQCMIMSRPGDGTEVRVWLPLRYSVTTVN 466 >UniRef50_A1AXR2 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=4 Tax=Gammaproteobacteria RepID=A1AXR2_RUTMC Length = 494 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 88/441 (19%), Positives = 177/441 (40%), Gaps = 33/441 (7%) Query: 174 LRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQR 233 +R L P+ L + + R + R + A+N++ E Y +E Sbjct: 54 IRQDFLSPFSDLQSWIDGYKSNQ-SVRLSDHQRTTFQPVAKAINHLIDENQHLYDDMESI 112 Query: 234 VQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLL---------RDI 284 + ++ L K+ L L+ + +L+ + E + L+ N+ D Sbjct: 113 LNKQIQRLSKKSASLETLYSVSSKLNKMHSIDELFTHFLHIFINMIGASSGAARSLSDDG 172 Query: 285 ELRVYDTD---DEENHQEFTCQPDMTCDD-------------KGCQLCPRGVLPVGDRGT 328 +L + T D + D C + C C Sbjct: 173 QLHLVATQGVIDRQGQVTDVLSADCFCGEIAMASDTYVQFSVHTCAQCVGKKSQTKASVG 232 Query: 329 TLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVM 388 T+ L G L+ D++ L+ ++ E + L R + +++ + Sbjct: 233 TIFIPLKYHGKTLGTFNLFFDTLPSLTFDERALLSSIAENIAIALDKARLDAQTKRMELS 292 Query: 389 EERATIARELHDSIAQSLSCMKMQVSCL-QMQGDALPESSRELLSQIRNELNASWAQLRE 447 +ER +++E+HDS+AQ++ +K+QV+ L M + + + +++ + + +LRE Sbjct: 293 QERLFLSQEIHDSLAQTIYSLKLQVTVLGNMLKTGKKSDASDKVLSLQSNITQANQELRE 352 Query: 448 LLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 L+ FR+ L G+ +L + ++ G L + ++ P + +++I +EAL Sbjct: 353 LMCNFRMPLDPKGIEVSLTNLLNRFMSEEGITTYLQVEGKLQVSP-EVEMQIMRIIQEAL 411 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR----SNHYGMIIMRDRAQSL 563 SN KH++A V V + N +L ++D+G G ++ N+ GM IM++RA + Sbjct: 412 SNIRKHAKARNVRVLLLVEPN-CQLLIEDDGIGFEKDQNESEIMGNNIGMNIMKERAIRI 470 Query: 564 RGDCRVRRRESGGTEVVVTFI 584 + GT V+V Sbjct: 471 GASIEIESEVDEGTCVIVNLP 491 >UniRef50_D1C419 Histidine kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C419_SPHTD Length = 437 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 14/238 (5%) Query: 355 SHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVS 414 S ++++L+D L+ A ER++Q V+EER +ARE+HD++AQ + + M + Sbjct: 186 SQERKRLIDELMATRAA------LAERERQAGVIEERQRLAREIHDTLAQGFTSIVMHLE 239 Query: 415 CLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPG--LRPALEASCEEY 472 + A + R + Q R S R L+ R + E G L AL E + Sbjct: 240 AAEPHIPAEATALRRHVEQARATARDSLNDARRLVWALRPEQLEQGGSLADALARVAERW 299 Query: 473 SAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKL 532 S G + P +P + L +I +EAL+N KH+QA V +T++ D++V L Sbjct: 300 SEDTGITAHVTVDGTPVPLPPDVEVTLFRITQEALANVRKHAQAGRVDITLSYLDDEVLL 359 Query: 533 TVQDNGCGVPENAIRS------NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 VQD+G G + + +G+ MR+R + L G + GT + V Sbjct: 360 DVQDDGVGFDRATVSATPGSVNGGFGLTGMRERLRLLGGSLMIESAPGEGTSITVALP 417 >UniRef50_B0C7C8 GAF domain protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7C8_ACAM1 Length = 1980 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 92/417 (22%), Positives = 167/417 (40%), Gaps = 48/417 (11%) Query: 224 AESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRD 283 E A E+ QE+ A L N+ +S Q L + L L +L + D Sbjct: 1562 KEVLAEREKAAQERAAELAKTNEAIS---QTLNALTTEPELDRFLGQILTQIIEQIGADD 1618 Query: 284 IELRVYDTDDEENHQEFTCQ------------PDMTCDDKGCQLCPRGVLPVGDR----- 326 L +YD + H + Q P++ D + + + Sbjct: 1619 THLFLYDAETHTLHSQLAVQNNTVYLGNAPNDPELFYTDIPADITAAWQILISSDKPFTL 1678 Query: 327 ------------GTTLKWRLADSHTQ------------YGILLATLPQGRHLSHDQQQLV 362 TTL+W + H G + LS +Q + V Sbjct: 1679 DDDNPKAATFLWPTTLEWHTSRGHQSATCACMKIGNQPIGFIGFAFCDQTVLSTEQLEFV 1738 Query: 363 DTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA 422 L Q T + L R E+ + + +ER +ARE+HD++AQ+ + + +Q+ + Sbjct: 1739 QALTNQATLAIHLTRLAEQARTNALTDERNRLAREIHDTLAQAFTGISLQLEAAKNILSQ 1798 Query: 423 LPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVK 481 PE+++ L Q R+ + ++ R + R + L L AL+ + + + + Sbjct: 1799 QPETAKSYLDQARDLTHQGLSEARRSVHALRSEALERETLVKALQKNLTQMTLNTSLQTE 1858 Query: 482 LDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV 541 Q P L+ ++LL+I +EA++N L+H+QA + VT+A D +V L V D+G G Sbjct: 1859 FQIQGTPILLEEGLQLNLLRIGQEAITNVLRHAQAKTLTVTLAFTDQEVGLCVTDDGVGF 1918 Query: 542 -PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI--PEKTFTDVQGD 595 P++ +G++ +R+R +G ++ GT + V P + + D Sbjct: 1919 EPQDVADITGFGLVGIRERTVRYQGQVKITSHPGEGTTIEVKMPVQPNASSPGREED 1975 Score = 44.5 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 33/97 (34%), Gaps = 14/97 (14%) Query: 331 KWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEE 390 L G+L T L + + L+ L +Q + L E +Q +++E Sbjct: 515 AVALFAGDQPIGMLGLTFDHEVDLRDEDRDLIRALADQAALAIQLANLAEGTRQTALLQE 574 Query: 391 RATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESS 427 R + K Q++ L + L ++ Sbjct: 575 RE--------------AAAKAQIAELAKRDRILQATA 597 >UniRef50_Q67RQ8 Two-component system sensor kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67RQ8_SYMTH Length = 500 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 94/448 (20%), Positives = 169/448 (37%), Gaps = 42/448 (9%) Query: 176 ARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQ 235 + +P +++A+A + D RA + + ML + +++ +L LE++V Sbjct: 51 RQFTRPVSEVMALARRLREGDLRARAVLPPGTDWFMLARTMTDLAEQLEAVTRNLEEQVA 110 Query: 236 EKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEE 295 +TA L K L + Q +++ + + L + + T D+ + D Sbjct: 111 VRTAALARKADQLRAVGQVGQQVAAV-LDPDVLLHFVTRVMRGTFGYDVAAVLLQHGDYL 169 Query: 296 NHQEFTCQPDMTC-------------------------------DDKGCQLCPRGVLPVG 324 + + P +LP Sbjct: 170 VLAACAARGREEVPLGRAFPLTGPTPSPLARALAAGEPGGERAEGEHPESGPPTPLLPDT 229 Query: 325 DRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQE---R 381 L + + G+++ R + + V T+ Q+ L R E R Sbjct: 230 APRAELAIPIRVADRTLGLMVVQSFDPRPFDEEDRFTVQTIAGQVAVALENARLLEAERR 289 Query: 382 QQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNAS 441 ++L V EER +ARE+HD++AQ + MQ+ ++ D PE++R S Sbjct: 290 LRRLAVTEERNRMAREIHDTLAQGFMGILMQLRAMEAAAD--PETARFHREVAAALAQES 347 Query: 442 WAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLL 500 + R + R L + GL AL A +FG + + + LL Sbjct: 348 LQEARRSVWKLRPHPLEDRGLAEALAAEVAALEGQFGLIGRFHMDGDAAALEPPVEVALL 407 Query: 501 QIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR----SNHYGMIIM 556 +IA+EA+ NA+K+++A+ + V + D LTV D+G G + YG+ +M Sbjct: 408 RIAQEAIHNAVKYARATRLDVGLTIRDGMAVLTVADDGVGFDPASPPKPAAGGGYGLGMM 467 Query: 557 RDRAQSLRGDCRVRRRESGGTEVVVTFI 584 DRA+ + G V R GG +V Sbjct: 468 ADRARQVGGGLEVDARPGGGCRIVARVP 495 >UniRef50_Q1H473 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H473_METFK Length = 603 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 123/466 (26%), Positives = 214/466 (45%), Gaps = 25/466 (5%) Query: 135 DQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLL-----AMA 189 D L+ G R E + +V++ + + + L + +R L+ L+ Sbjct: 146 DALLDGLRRDAEEKQAVLVMLQLMGLLLLLCCLGAMALLIRQVLIDRIAGLVALLPNQAL 205 Query: 190 SAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILS 249 S RD +E++ L + + SA++ A E + ++ L + + Sbjct: 206 SQQDRRDL---------DELSQLESLVQEFSAQMQGFKAETEWFNRTRSDLLRRMLRAHT 256 Query: 250 FLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFT-------C 302 FL + L ++ +++ LR++ L E + Sbjct: 257 FLHDLVVAFNDSVVNESSLKTMIYAMESSLDLRNVALHFMLDGGEAGGERLLFSQHAPGA 316 Query: 303 QPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLV 362 P+ D + + ++ G + ++ G LL G+ L Sbjct: 317 LPEGVSRDLAVKRSAKFLVADGAECIAATFACPGDNS--GTLLLEAKPGQEFHESDITLA 374 Query: 363 DTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA 422 + + L+ L +E+ ++L + EERA IARELHDS+AQSL+ MK+Q++ LQ QG Sbjct: 375 EITAQLLSLVLGAQSREEQARRLALFEERAAIARELHDSLAQSLAYMKIQIARLQTQGSG 434 Query: 423 LPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKL 482 + E+ +++R L+ ++ +LRELL+TFR+ + GL A++A+ +E+S + + L Sbjct: 435 GQHDTNEITTELREGLDTAYRELRELLSTFRMHMDVRGLGFAIQAAIDEFSHRSSVSITL 494 Query: 483 DYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDN-QVKLTVQDNGCGV 541 D +L + ++ H+L + REALSN ++H+ A VVV +A V +T+ D+G G+ Sbjct: 495 DNRLVNCRLTVNEEFHILHVIREALSNIIRHAGAKNVVVALAYTPGSTVVVTIDDDGVGI 554 Query: 542 PENAI-RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 P A HYG IMRDRA SL GD + R GGT V + F P+ Sbjct: 555 PATATDEPGHYGQSIMRDRAYSLGGDITISARRQGGTRVRLIFTPK 600 >UniRef50_B9LCJ4 GAF sensor signal transduction histidine kinase n=3 Tax=Chloroflexus RepID=B9LCJ4_CHLSY Length = 731 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 90/395 (22%), Positives = 159/395 (40%), Gaps = 30/395 (7%) Query: 228 AVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELR 287 A L Q A ++ + L+ L R + + L E L +Q ++L Sbjct: 335 ARLYAESQRLAAQVQRRADQLAVLNSIARIVTATLDLRESLPLATEQIQRGFGYPQVDLF 394 Query: 288 VYDTDDEENH-------------------------QEFTCQPDMTCDDKGCQLCPRGVLP 322 + + + E + + +D + G+ Sbjct: 395 LLEEEANELILVASAGRYAPERVGYRQHINLGLVGRAARSGRIVRAEDVAAEADYLGLSE 454 Query: 323 VGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQ 382 D + L L + G+L P+ L+ + +++T+ + L + R +R Sbjct: 455 RLDIRSELCVPLISNGKTLGVLNIESPERAGLTEEDAAVLETVADMLAGAVENGRLYQRA 514 Query: 383 QQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASW 442 QQ +EER +ARELHDS++Q L M + + Q + P LL ++ A+ Sbjct: 515 QQAAALEERNRLARELHDSVSQQLFSMTLTAQAARSQFERNPARVPALLDRLHETATAAL 574 Query: 443 AQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQ 501 A++R L+ R L + GL A++ + + + G ++L+ R + L + Sbjct: 575 AEMRALIFQLRPPALRDQGLVAAIQQHAQHLAHREGLRIELNVIGDERHARGIEQP-LFR 633 Query: 502 IAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN---HYGMIIMRD 558 I +EAL+N +KH+ A V + + N +QV + V D+G G A S H G++ MR+ Sbjct: 634 IVQEALNNIVKHAAARNVQIMLEFNADQVAIRVIDDGKGFDPAARPSGEGRHLGLLSMRE 693 Query: 559 RAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQ 593 RA L G V R G EV V +++ Sbjct: 694 RAAELGGSFNVHSRPGAGAEVEVVVPLRGRHGNLE 728 >UniRef50_Q1AZP1 Periplasmic sensor signal transduction histidine kinase n=2 Tax=Actinobacteria (class) RepID=Q1AZP1_RUBXD Length = 508 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 73/300 (24%), Positives = 120/300 (40%), Gaps = 8/300 (2%) Query: 303 QPDMTCDDKGCQLCPRGVLPVGDRG--TTLKWRLADSHTQY-GILLATLPQGRHLSHDQQ 359 +P L P P+ RG + L L+ + G+L + R S Sbjct: 207 RPPAPLRVPVSSLPPGERSPLEGRGVGSVLVVPLSPPGGGFRGLLTVASRRRRAFSRSDV 266 Query: 360 QLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ 419 + L R ER ++ V+EER +A E+HD++AQ + + + Sbjct: 267 RTYAAAAGMAALVLENLRLVERARRAGVLEERQRLAHEIHDTLAQGFTSIVTNLEAAGGA 326 Query: 420 GDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGF 478 + R L Q S ++ R L+ R + L E L AL +S+ G Sbjct: 327 LQRDRAALRRHLEQALAVARESLSEARRLVWALRPEPLEEAPLPEALRRLAARWSSSSGI 386 Query: 479 PVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNG 538 P ++ PR +P+ + LL++A+EAL+N KH++A V +T++ ++V L V+D+G Sbjct: 387 PARVLVTGEPRALPADPEVTLLRVAQEALANVRKHARAGRVAITLSYIGDRVALDVRDDG 446 Query: 539 CGVPENAIRSN----HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQG 594 G A +G+ MR+R G V GT + V G Sbjct: 447 VGFDPAAPSPGDDGSGFGLRSMRERVGRAGGTLSVESAPGEGTVLSAEVPAAGAAEPVGG 506 >UniRef50_C6QH09 Histidine kinase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QH09_9RHIZ Length = 619 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 151/601 (25%), Positives = 259/601 (43%), Gaps = 41/601 (6%) Query: 2 LKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLL 61 +++ L L + A +V + L S +L AI A LR +L Sbjct: 41 VRKALGRYPLYFRTAGLVTSAAFAALIIFTASWYLSNY----GAAIGDA--LR----KLH 90 Query: 62 AAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRE 121 AA KP + + + A+L + D Q L++ N + + E Sbjct: 91 AAEISLVAQKPEGAKDQNVSPVADLIGSDVFDDQTI----LRESNVNLDVLKDGQEGKSE 146 Query: 122 TVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQP 181 VS D + + R E R V + + + L + R L+ Sbjct: 147 IVSRDAIELLQQAG---LNLQRNLEARRTQVAFLQLLSFCVLLFCLARLSVGSRRVLVDR 203 Query: 182 WRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGL 241 ++ S + ++Q + R+E+A L + + ++A S A + R L Sbjct: 204 VDRIAGAVS--AGGAYSQ--GRARRDEIARLEDRVGRLLTDIANSGAGTDTR-----TSL 254 Query: 242 EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDE------- 294 E +I +L A + L +L L+ L++ + + Sbjct: 255 ERMARIQDYLSNAMSVMLRHPFGDGMLRKILYALERTLDLQNTAIVFSEDAAVFHSGRCL 314 Query: 295 -ENHQEFTCQPDMTCDDKGCQLCPRGVLPVGD-RGTTLKWRLADSHTQYGILLATLPQGR 352 N + + D R + D+ + +LL L R Sbjct: 315 FSNREPAALSKQFEAEISQAGAGAIVEEHAEDLRTRKVGLGFVDATGETSVLLVELSGDR 374 Query: 353 HLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQ 412 L + + + L+ LD H + +++ V+EERA IARELHDS+AQSLS MK+Q Sbjct: 375 TLEAVEIKTLRITASLLSMAAKLDGHDQEARRIAVLEERAAIARELHDSLAQSLSFMKIQ 434 Query: 413 VSCLQMQGDALPESSRELL----SQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEAS 468 ++ LQ + + SRE S++R+ L+ ++ +LRELL TFR+ + GL A+E++ Sbjct: 435 LARLQSYQNNVTSESREQTKAITSELRHGLDNAYRELRELLATFRVHMDVRGLDFAIESA 494 Query: 469 CEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVA-QND 527 EE+S + G P+ LD +L + ++ H+L + REALSN L+H++A+ V +T+ + + Sbjct: 495 IEEFSQRSGLPISLDNRLAGAALTVNEEFHVLHVVREALSNILRHARATNVWITMDVRRN 554 Query: 528 NQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 +V +T+ D+G G P ++H+G IM++RA SL G + R GT V +TF P+ Sbjct: 555 GEVTVTIDDDGIGYRPAETKETSHHGQTIMKERAFSLGGAIDIAPRPEAGTRVTLTFTPQ 614 Query: 587 K 587 K Sbjct: 615 K 615 >UniRef50_B2JVQ4 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Burkholderia phymatum STM815 RepID=B2JVQ4_BURP8 Length = 605 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 118/468 (25%), Positives = 205/468 (43%), Gaps = 33/468 (7%) Query: 140 GFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWL-----RARLLQPWRQLLAMASAVSH 194 + E V ++ LL+F ++ L R + +P L A+ Sbjct: 132 ALRAHVAYQREVHAAVLGLLQACTVCLLIFGVVSLAWGARRTLVARPRAALQALVET--- 188 Query: 195 RDFTQRANISGRNEMAMLGTALNNMSAELAESYAV---LEQRVQEKTAGLEHKNQILSFL 251 GR+E+ L ++ L L++ V++ + +Q L L Sbjct: 189 ---GLSVP-QGRDEIERLLKLQAELAVRLRTEQDESVRLKRIVEDY---ITFADQSLELL 241 Query: 252 WQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPD------ 305 +L P L +L L + + I L V ++ + + P+ Sbjct: 242 HHICAQLAEEEPSGRTLEALLQRLVGVLRAQRIALVVTESTAQLLDIDPVVAPNGDVPAI 301 Query: 306 --MTCDDKGCQLCPRGVLPVGDRG----TTLKWRLADSHTQYGILLATLPQGRHLSHDQQ 359 ++ L P D G L + YG+L+A Sbjct: 302 VRSRVTNELMTLAGTHTFPPLDNGEVPPPVLAAPVRVPLASYGVLIAEGEPETRFELRHL 361 Query: 360 QLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ 419 L++T+ L ++ R +++ + EER IARELHDS+AQSLS MK+Q++ LQ Sbjct: 362 YLIETIASVLAHAISNLSRDVRDRRMALFEERNAIARELHDSLAQSLSYMKIQLARLQAV 421 Query: 420 G--DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFG 477 + E+ IR +++++ QLRELLTTFR + GL LE EE+ ++ Sbjct: 422 LPPELSQSDIAEIARGIREGIDSAYRQLRELLTTFRSPMHAHGLASTLEELAEEFGSRSE 481 Query: 478 FPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDN 537 + +D ++P + ++ +H+ QI REAL+N L+H++A+ V + + + +++ D+ Sbjct: 482 VQISIDNRVPRMRLSVNEEMHVAQIVREALTNVLRHARATTAQVQLMSDGRTMTVSIDDD 541 Query: 538 GCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 G G+ +HYG+ IMR+RA+SL G V+ E G+ VV+TF+P Sbjct: 542 GRGINRTEGDEHHYGLSIMRERARSLGGRLEVKPAE-RGSRVVLTFVP 588 >UniRef50_Q1ASU9 GAF sensor signal transduction histidine kinase n=2 Tax=Bacteria RepID=Q1ASU9_RUBXD Length = 391 Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 86/379 (22%), Positives = 149/379 (39%), Gaps = 31/379 (8%) Query: 237 KTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDD--- 293 +T LE +N+ L+ + R L+ L E L L + L L+ + + D + Sbjct: 10 ETQDLERRNRELAAVNAVARELNRSVDLQEALRFTLARVAELLGLKTGWVWLMDGGEPYL 69 Query: 294 --EENHQEFTCQPDMTCDDKGCQLC----PRGVLPVGDRGTTL----------------- 330 N + D C +G L G + Sbjct: 70 AATMNLPSVLAENPPLMDGSRYCYCLDTYKKGDLLEGAANVNVLACSRLSGLVDGTDGLR 129 Query: 331 ---KWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIV 387 L T+ G++ R LS + +L+ T+ + L+ + R R L Sbjct: 130 YHASIPLYSGETKLGVMNVASHDWRSLSREDLRLLYTIGDLLSIAVERARLFARSALLGA 189 Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA-LPESSRELLSQIRNELNASWAQLR 446 EER +ARE+HD+IAQ L+ +++ + +A P +R+ +S+ + + R Sbjct: 190 SEERNRLAREIHDTIAQGLAATALRLETAEALLEAGSPAEARKEISRALALTRTNLEEAR 249 Query: 447 ELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 + R L L AL E + G PV+ R +P L +I +E Sbjct: 250 RSVLDLRAAPLEGRSLAEALALLAESQERESGIPVRFRAVNGARPLPPRVETGLYRICQE 309 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRG 565 AL+NA +H++AS + V + + +L V+D+G G+ + +G++ MR+RA+ L G Sbjct: 310 ALNNAARHAEASRIEVLLTLTPGEARLRVEDDGRGLDPSPAPPGRHGILGMRERARLLGG 369 Query: 566 DCRVRRRESGGTEVVVTFI 584 + GG V Sbjct: 370 RLEISEAPGGGARVEAAVP 388 >UniRef50_B4WPC3 GAF domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WPC3_9SYNE Length = 2009 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 89/446 (19%), Positives = 172/446 (38%), Gaps = 62/446 (13%) Query: 210 AMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLS 269 A L L + E ++ AVL+ + + +A + L Q L + L L Sbjct: 1561 ATLAIHLTRLGEEAKQA-AVLQAQEKAASARAAELTKTNQALSQTLDVLTTEPELDRFLG 1619 Query: 270 PVLNGLQNLTLLRDIELRVYDT------------------DDEENHQEFTCQPDMTCDDK 311 +L + D L +YD N E QP T Sbjct: 1620 QILTQIVEQIGADDTHLFLYDEATDTLRSHIAVQDDQVYLGHAPNDPELFYQPFPTDITD 1679 Query: 312 GCQLCPRGVLPVGDR-----------GTTLKWRLADSHTQ------------YGILLATL 348 Q+ P+ TTL+W A H G++ Sbjct: 1680 AWQMMTASREPLIFDEIRRDVTDFYWPTTLEWHEARGHQSAACICLKVGSQPIGLIGFAF 1739 Query: 349 PQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIV----MEERATIARELHDSIAQ 404 L+ +Q + + L Q T ++ L + ++ + + EER +ARE+HD++AQ Sbjct: 1740 RSIAILTTEQIEFIQALTNQATLSIHLTQLADQSKAAALSVALTEERNRLAREIHDTLAQ 1799 Query: 405 SLSCMKMQVSCLQMQ---------GDALP-----ESSRELLSQIRNELNASWAQLRELLT 450 + + + +Q+ + + P + ++ + + R+ ++ R + Sbjct: 1800 AFTGVSLQLEAARSALTKAAASVAAERDPLPPAFDQTQTFILRARDLSRQGLSEARRSVR 1859 Query: 451 TFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSN 509 R Q L L AL + + + + P +P +HLL+I++EA++N Sbjct: 1860 ALRSQALETDTLPTALRKVLNQINHDTHLDTQFYLEGTPEPLPDDIQLHLLRISQEAITN 1919 Query: 510 ALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRV 569 AL+H+QA+++ +T+A +++L + D+G G ++ + +G++ +R+R G ++ Sbjct: 1920 ALRHAQATQIDLTLAFEPREIQLRIVDDGIGFTPSSQAGSGFGLVGIRERVARFHGTFQL 1979 Query: 570 RRRESGGTEVVVTFIPEKTFTDVQGD 595 GT + VT +P T V Sbjct: 1980 SSSPGVGTTIEVT-VPFPTAPSVPPP 2004 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 90/289 (31%), Gaps = 67/289 (23%) Query: 210 AMLGTALNNMSAELAE--SYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCER 267 A L L +++ E + E+ + + A L N+ ++ Q L L E Sbjct: 964 ATLAIHLTHLAEEAKQAAILQEQEKATEARAAELAKTNEAIA---QTLTTLTETPELDEF 1020 Query: 268 LSPVLNGLQNLTLLRDIELRVYDTD------------------DEENHQEFTCQPDMTCD 309 L +L + L +YD + NH + P Sbjct: 1021 LGQILIKISEPIEACKAHLFLYDKETDTLNQHIAVEDGQAFKGSAPNHPDLFRHPIPVDL 1080 Query: 310 DKGCQLCPRGVLPVGDRGT-----------TLKWRLADSHTQ------------YGILLA 346 + P + +L W A+ H G + Sbjct: 1081 SPAWEHIVNSPKPWTLDESNPGSAELWWPESLPWHRAEGHRAATCACMRIGNKPIGFIGF 1140 Query: 347 TLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHD------ 400 L+ +Q + + L Q T ++ L R E +Q +++E+ AR D Sbjct: 1141 AFRHIAVLTDEQLEFIQALTNQATLSIQLTRLAEEAKQAAILQEQEKAAR---DRAAELA 1197 Query: 401 ----SIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQL 445 SI Q+L+ + L E +L+++ N++ A A L Sbjct: 1198 KANESIGQTLTNL--------AARPKLDEFLGYILAEMSNQVEACKAHL 1238 >UniRef50_A5UUR7 Multi-sensor signal transduction histidine kinase n=2 Tax=Roseiflexus RepID=A5UUR7_ROSS1 Length = 469 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 88/384 (22%), Positives = 160/384 (41%), Gaps = 21/384 (5%) Query: 220 SAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLT 279 S + LEQ ++++ + L+ L + NRR+ A L + L + + L Sbjct: 81 SRQEQRYQTGLEQALRDQ----QRAYSQLALLSEVNRRIVDSATLDDILDAAMTFPRRLV 136 Query: 280 LLRDIELRVYDTD-------DEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKW 332 R + + + + +E + + + L Sbjct: 137 PARATAVVLLNPNGFVEARAQGMPGEELSRLRRALGIADSVATARQPQMIERSGCACLVL 196 Query: 333 RLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQER------QQQLI 386 L D G + L ++ D+ L++T+ ++ +A R + R Q + Sbjct: 197 PLHDGMALLGWIELHLEDSLPVASDELALLETIANEVAEAIASARRRSREERAIYQLERA 256 Query: 387 VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLR 446 + EERA IAR++HD IAQSL+ M+M+V + P+ R L +++ L +LR Sbjct: 257 IAEERARIARDIHDGIAQSLAFMRMRVDLWLDWIEHDPQRLRAELLELKTTLREQIRELR 316 Query: 447 ELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 + R Q E G L E++ + + + +D P +P ++ +E Sbjct: 317 RAIFALRPVQFDELGFVGGLRRYIVEFAGQHNWDIDVDLTGTPSTIPPEIEAVAFRVVQE 376 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR--SNHYGMIIMRDRAQSL 563 AL+N KH+ A+ V V + + D +++ V+D+G G A+ H G+ MR+R +L Sbjct: 377 ALTNVAKHAAATRVEVMIGRVDEGLQIVVRDDGRGFDPGALPDAPGHVGLRQMRERLAAL 436 Query: 564 RGDCRVRRRESGGTEVVVTFIPEK 587 RG + R GTE+ +IP Sbjct: 437 RGQLTILSRPGAGTELR-AWIPLP 459 >UniRef50_Q1H0K4 Multi-sensor signal transduction histidine kinase n=2 Tax=Methylophilaceae RepID=Q1H0K4_METFK Length = 573 Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats. Identities = 96/464 (20%), Positives = 179/464 (38%), Gaps = 32/464 (6%) Query: 137 LVSGFDRTTEMRIETVVLVHRVMAVFMALLLV-FTIIWLRARLLQPWRQLLAMASAVSHR 195 LV D +R H + +++ I W+ R L+P +L S V Sbjct: 132 LVVASDAAGAIRESWASFQHLLWIEAGFFVVLNALIYWMLGRWLRPADDILRAISEVERG 191 Query: 196 DFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQAN 255 + R E + + N M L +E+T N+ L+ + Q + Sbjct: 192 NLDVRLPKFNVPEFSRIAQNFNLMGESL-----------RERTEE----NRRLALIVQQS 236 Query: 256 RR---LHSRAPLCERLSPVLNGLQNLTLLRDI--ELRVYDTDDEENHQEFTCQPDMTCDD 310 +H +P L I + E QE + M+ + Sbjct: 237 ADAIMIHDPDGNISFWNPAAQRLFGYAPEDIIGKSAALLMPPGHEGEQERSSAASMSANG 296 Query: 311 KGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLT 370 + V G + G L+ + R ++ + L E+ Sbjct: 297 LVEHYDTQRVARDGKLLDVSLSIAPLMDPKSGELIGEICSMRDITERK------LAEETA 350 Query: 371 ATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSREL 430 L +R Q + +ER ++ARELHD + Q ++ +K + + S Sbjct: 351 RKLEENRQLTHLIQRHIEDERRSLARELHDELGQYVTAIKTFAVAIANKAKQEMPSIESS 410 Query: 431 LSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAK-FGFPVKLDYQLPP 488 I + N + + ++ R L GL AL + + A+ L+ Q Sbjct: 411 AQTIVSAANHIYDGMHNIIRHLRPGSLDNLGLSEALRDAVAGWQAQNSNVTFNLELQGKL 470 Query: 489 RLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQ-VKLTVQDNGCGVPE-NAI 546 L+ I+L +I +E+++NAL+H+QA + + +++++N + L ++DNG G+ N Sbjct: 471 DLLGESLNINLYRIVQESVTNALRHAQADRIDIRLSRDENGNLTLLIKDNGIGMNMCNVD 530 Query: 547 RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFT 590 ++ H+G++ MR+R Q+L G+ + + GT + VT IPE+ Sbjct: 531 QNRHFGLLGMRERVQALYGNFAIDSQPGQGTAITVT-IPERPMP 573 >UniRef50_Q1IXN3 Periplasmic sensor signal transduction histidine kinase n=2 Tax=Deinococcus RepID=Q1IXN3_DEIGD Length = 564 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 81/342 (23%), Positives = 133/342 (38%), Gaps = 4/342 (1%) Query: 244 KNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQ 303 + ++ L +A R+ L L+ + + + + L D + Sbjct: 218 ARREVAALRRAAGRVALGDDLQATLADLAGQARAASTAWAVAL--TAPDGTLRARSGPDH 275 Query: 304 PDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVD 363 P + V T + G L A G ++ + Sbjct: 276 PTLHGPGASPPAGGADVRYAASGVTLATLPVVAGGADGGTLRALYAPGTQPGPEELAFLL 335 Query: 364 TLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDAL 423 ++ + L R + +ERA +ARELHDS+AQ+L + + + Sbjct: 336 SIADHAGTALHAAELIRRASERAEEQERARLARELHDSVAQALYGITLGAKTARATLGRD 395 Query: 424 PESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKL 482 PE +R L ++++ LL + R L E GL AL + A+ G V Sbjct: 396 PEKTRASLDYTIRLAEGGVSEMKALLFSLRPDALEEGGLVAALMQNAHALEARHGLTVHA 455 Query: 483 DYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP 542 D PRL P+ QA ++A+EAL N +KH++AS+V ++V + +V L V+D+G G Sbjct: 456 DLGREPRLSPTAQA-AAYRVAQEALHNVVKHARASQVWLSVREEAGRVTLEVRDDGRGFD 514 Query: 543 ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 A+ G MR+RAQ G V GT V + Sbjct: 515 PAALPGGTLGQRSMRERAQGTGGTLTVHSSPGAGTTVTLILP 556 >UniRef50_Q74GJ3 Sensory box histidine kinase n=1 Tax=Geobacter sulfurreducens RepID=Q74GJ3_GEOSL Length = 830 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 103/423 (24%), Positives = 167/423 (39%), Gaps = 61/423 (14%) Query: 221 AELAESYAVLEQRVQEKTAGLEHKNQILSFLWQAN--------------RRLHSRAPLCE 266 A L E+ LE RV+E+TA LE N+ L A RRL APL Sbjct: 405 AALREAKEQLELRVRERTADLEQANRALQEEVAARSQAEESLRASESRFRRLVQMAPLPL 464 Query: 267 RLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTC----------------QPDMTCDD 310 + L+ + R L Y +D +E+ Q + Sbjct: 465 CFADASGTLRYVND-RFTRLFGYAPEDIPTQEEWWSRVCTDGRCRGETADAWQASVQRGP 523 Query: 311 KGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQ--GRHLSHDQ----QQLVDT 364 G V + ++ T G +LAT R L+ D+ ++L++ Sbjct: 524 NGASDIEPAEFRVACKNGDIRLVEVSGITIEGTVLATFIDITERRLAEDELHRHRELLEE 583 Query: 365 LVEQLTATLAL----------DRHQERQ------QQLIVMEE--RATIARELHDSIAQSL 406 LV Q TA L L +R + ++L MEE R +A ELHD I + L Sbjct: 584 LVHQRTAELKLRNMELASEIAERRRAEAALRCYTRRLTEMEEDLRKKLAAELHDEIGRDL 643 Query: 407 SCMKMQVSCLQMQGDALPES-SRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPA 464 + + + S + + P+ + + + +R L R L + GL A Sbjct: 644 TALNLNFSVIGNRLVQGPDGCLKARIEDTERLIEDISRTVRGLTAKLRPPVLDDYGLPAA 703 Query: 465 LEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVA 524 L + +S + G V + +P+ + I L +I +EAL+N KH+ A V V++ Sbjct: 704 LRWHADLFSRRTGIEVTVRGADSVPRMPAEKEIALFRIVQEALTNCSKHANAGNVKVSLD 763 Query: 525 QNDNQVKLTVQDNGCGVPENAIR----SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVV 580 D +V+L+V D+G G + + +G+ IMR+RA+ + G R+ GT + Sbjct: 764 HGDGRVRLSVVDDGIGFAPESASPTPAGSGWGLTIMRERAELIGGTFRLNTAPGKGTVLT 823 Query: 581 VTF 583 V Sbjct: 824 VEI 826 >UniRef50_Q025Z0 Histidine kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q025Z0_SOLUE Length = 969 Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats. Identities = 66/218 (30%), Positives = 105/218 (48%), Gaps = 4/218 (1%) Query: 371 ATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSREL 430 A L Q R + +V+EERA +ARE+HD++AQ + Q+ + M A +R Sbjct: 750 AIYQLRLRQIRSRFALVLEERARLAREIHDTLAQGFVGISSQLDAVAMSMPAEATPARGY 809 Query: 431 LSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPR 489 L R S + R + R L L A+++ +A V +D P Sbjct: 810 LDLARRMARHSLTEARRSVMDLRASALEGQDLAAAIQSGTLLLTAGSNVKVSVDVSGPVT 869 Query: 490 LVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN---AI 546 +P HLL+I +EA++N LKH+ A + V + ++ L + D+G G ++ A Sbjct: 870 ELPEEMEQHLLRIVQEAVTNVLKHAAARNIWVKIRVEPRKLYLAILDDGRGFDQHDVFAS 929 Query: 547 RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 R H+G+I MR+RA+ L G+ R+ GT+V VT Sbjct: 930 RGGHFGVIGMRERAERLGGELRLASHPGEGTQVEVTVP 967 >UniRef50_C6XAG1 Histidine kinase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG1_METSD Length = 608 Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats. Identities = 110/472 (23%), Positives = 201/472 (42%), Gaps = 15/472 (3%) Query: 109 ELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLV 168 L+ + ++ V Q + D + R E++ + L+ V + + L Sbjct: 121 HLVAQYPQPEHSAGWLQAVDQVLRDYDSVAEELQRDVEVKQSVIGLLQLVSGLLLVSCLF 180 Query: 169 FTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYA 228 + + L+ L + +F + +E A L + ++A L A Sbjct: 181 ALALKAKHLLIDRIGHLT----RLLPEEFQLEDDQPYADEFARLEQTIYRIAARLEGFRA 236 Query: 229 VLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRV 288 E Q ++ L + FL Q +++ L VL L++ ++++ L Sbjct: 237 ESEWFNQTRSERLRRVLRAQGFLHQLVGMINTPDLSEALLRKVLYMLESALDVQNVALLF 296 Query: 289 YDTDDEENHQEFT-------CQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSH--- 338 + E + P + LP D +A Sbjct: 297 AEKSGGETVERTLFSQHLPRAIPPGLLAELSTSQAANYQLPASDGQEGASGVVAAFTSPW 356 Query: 339 TQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIAREL 398 G+L +LV+ + L+ + ++ ++ +++ERA IAREL Sbjct: 357 ETLGMLTVEAEATHVFDETDIELVEMTAQLLSMVMGTQNREQEGRRAALLDERAAIAREL 416 Query: 399 HDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTE 458 HDS+AQSLS MK+Q+ LQ R +++++R L+ ++ +LRELL+TFR+ + Sbjct: 417 HDSLAQSLSFMKIQIFRLQSHPQTQHADLRGIVNELRQGLDNAYRELRELLSTFRVHMDV 476 Query: 459 PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASE 518 GLR A++++ +E+ + + LD +L + ++ H+L + REALSN ++HS AS Sbjct: 477 RGLRFAIQSAIDEFMQRSNLSIALDNRLVNCRLTVNEEFHILHVIREALSNIVRHSGAST 536 Query: 519 VVVTVAQ-NDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRV 569 V V + ++ V +T+ D+G G HYG IM++RA SL G+ V Sbjct: 537 VTVALVYQSNGSVIVTIDDDGIGYASKPGEPGHYGHSIMQERAYSLGGELAV 588 >UniRef50_A9B1S5 Multi-sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B1S5_HERA2 Length = 665 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 85/369 (23%), Positives = 145/369 (39%), Gaps = 25/369 (6%) Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ 298 A E + ++ L + R + S L E L + D+ + + D E Sbjct: 296 AAAERRATEMALLLEMTRTVGSTLHLPEVLLRAAAAIGEALHAEDVLVLLLDEQGERLTP 355 Query: 299 EFTCQPDMT--------------------CDDKGCQLCPRGVLPVGDRGTTLKWRLADSH 338 + D +GC V P T L L+ Sbjct: 356 QAGAMGDHNYLRMRWASPTSLSNEPTLAKVIKQGCARVIHAVSPTIPYQTLLALPLSIKE 415 Query: 339 TQYGILLATLP-QGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARE 397 G++L P + Q L + L + R ++ ++ EER+ +ARE Sbjct: 416 QVLGVVLVATPDRDAPFGPQQLVLAEGLATSAAIAIEQARLYDQARRAAQAEERSRLARE 475 Query: 398 LHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QL 456 LHDS+ Q+L M + + Q + P + + +++ + S ++RELL R L Sbjct: 476 LHDSVTQTLFSMTLTAEAARAQVERNPVRAATQIDRLKAAAHQSLGEMRELLLQLRPTPL 535 Query: 457 TEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQA 516 E G+ +L +A+ + L+ + ++ A L +IA+EA++NAL+H+QA Sbjct: 536 QEHGIIKSLRDHIASLNAQ-EVAINLECEGEDSVLSPANAAGLYRIAQEAIANALRHAQA 594 Query: 517 SEVVVTVAQNDNQVKLTVQDNGCGVPEN--AIRSNHYGMIIMRDRAQSLRGDCRVRRRES 574 + V V+ + L V+DNGCG + H G+ M +RA L G V+ Sbjct: 595 TNVRVSFSFASKSTTLMVKDNGCGFDPDLLERSGRHLGLTSMAERAGELGGTLDVQSVVG 654 Query: 575 GGTEVVVTF 583 GT + V Sbjct: 655 EGTCLTVHL 663 Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 43/284 (15%), Positives = 83/284 (29%), Gaps = 60/284 (21%) Query: 214 TALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANR--------------RLH 259 L +L +SY L++R+ E+TA + L L R L+ Sbjct: 95 ATLERAYEDLQQSYQRLQRRIDERTAERDQSTNQLQTLLDDTRSYVAQLTALNEVSVALN 154 Query: 260 SRAPLCERLSPVLNGLQNLTLLRDIEL-----------------------RVYDTDDEEN 296 + E L+ +L L+ + + R+ D+E Sbjct: 155 ATLDRDEVLACILRQLERVVTFDSASVQQLEDDELQVIAARGMNNEVYDMRISVPDNELA 214 Query: 297 HQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSH 356 + + D P V+ G + + L GIL + + Sbjct: 215 RKVVGSPAPVVLGDVRKD--PSFVMQPGPIRSWIGVALRVGERTVGILTVDSHRENAYTA 272 Query: 357 DQQQLVDTLVEQLTATLAL----DRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQ 412 D LV Q L + R ++ ++ E ++ +L ++ Sbjct: 273 DDGHLVANFANQAALALHNSHLFAAAERRATEMALLLEMTR-------TVGSTLHLPEVL 325 Query: 413 VSCLQMQGDA----------LPESSRELLSQIRNELNASWAQLR 446 + G+A L E L Q + ++ ++R Sbjct: 326 LRAAAAIGEALHAEDVLVLLLDEQGERLTPQAGAMGDHNYLRMR 369 >UniRef50_B9XNW0 Multi-sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XNW0_9BACT Length = 1382 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 3/259 (1%) Query: 328 TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIV 387 T L + + GI+ + R ++ +L L Q + L R ++ ++ V Sbjct: 1119 TVLFVPMLIAGHVEGIVSIRFTRKRSFRREEIELPQALAHQAMLAIQLMRLSQQSREAAV 1178 Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQG-DALPESSRELLSQIRNELNASWAQLR 446 M ER +AR++HD++AQ + + +Q+ G L E L++ + S + R Sbjct: 1179 MAERNRMARDIHDTLAQGFTGVIVQLEAAADAGSQGLVVEVAEHLNRAGDLARESLREAR 1238 Query: 447 ELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 + R L L ALE ++ +A K D Q P ++PS +LL+I +E Sbjct: 1239 RSVRALRPLALEGKNLFKALEGLIQKMTAGTTMRAKFDLQGEPCVIPSEWEDNLLRIGQE 1298 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRG 565 +NAL+H++ASE + + ++L +QDNG G A + + +G++ +R+R +S+RG Sbjct: 1299 VFTNALRHARASEFKARLVFSAQALQLELQDNGQGFDP-ARQHDGFGLLGIRERVESMRG 1357 Query: 566 DCRVRRRESGGTEVVVTFI 584 ++ GT V++ Sbjct: 1358 QLSIQSTNGEGTAVLIILP 1376 >UniRef50_C6CGT0 PAS/PAC sensor signal transduction histidine kinase n=11 Tax=Enterobacteriaceae RepID=C6CGT0_DICZE Length = 546 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 73/358 (20%), Positives = 145/358 (40%), Gaps = 12/358 (3%) Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ 298 + + Q + + + L + N L E+ H Sbjct: 185 RDIRERKQNEQLAYAREQEFRALVENTPDLVTRFDTQLNCQYANPAVLAHLRFTAEQLHG 244 Query: 299 EFT--CQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSH 356 P+ C + QL V L+ + + T++ ++ Sbjct: 245 RRLTDLLPNARCAQRILQLVQMVVDTQSSVEGELEEDIGMTTTRHRVIHHIRCVPEFDQR 304 Query: 357 DQQQLVDTLVEQLTATLALD----------RHQERQQQLIVMEERATIARELHDSIAQSL 406 + + T+ +TA + R RQ+++ EER IARE+HD + Q L Sbjct: 305 GKLISILTVGRDITAIRYAEKKLEDSHMQLRLLARQREISREEERKHIAREIHDELGQHL 364 Query: 407 SCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALE 466 + M+M +S ++MQ L + + + +R + T R + + GL PALE Sbjct: 365 TSMRMSLSLMRMQFARDNPHMLTQLQNLMALSDKTIQVVRHVATRLRPNVLDMGLTPALE 424 Query: 467 ASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN 526 +++ ++ P L P ++ A ++ +E+L+N +H++A++VV+++ Sbjct: 425 WLRDDFIRQYRCPCLLHAPEPEVVLNDECATAAFRVVQESLTNIARHAEATQVVISLENR 484 Query: 527 DNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 + + L+V DNG G + N +G++ M++R + L G+ + + GT V +TF Sbjct: 485 EGLIVLSVHDNGKGFDAQTRKPNAFGLMSMKERGRMLGGEVVIESQPGAGTLVRLTFP 542 >UniRef50_B2TAX2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2TAX2_BURPP Length = 748 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 65/314 (20%), Positives = 127/314 (40%), Gaps = 11/314 (3%) Query: 273 NGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKW 332 NG++ + + D+ E + G ++ L G + W Sbjct: 439 NGMRAADAIDKAPAELSDSVMPELRMITATLEQVMASGIGAKV----DLTSEKNGKPVGW 494 Query: 333 RLAD--SHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEE 390 ++ H G + L ++ + + L + AL + ++ EE Sbjct: 495 HVSAVPEHGANGDIRGALTIWTDITERMEVELR-----LRESYALLQELTSLRETAREEE 549 Query: 391 RATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLT 450 R IARE+HD + Q L+ +++ VS ++++ + + + + +R ++ Sbjct: 550 RKRIAREMHDELGQQLTALRLGVSAMRIEFAQDDPALAGRFRDLLALADDTMQVVRNVVA 609 Query: 451 TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNA 510 + R + G+ ALE E+S L ++ +AI L +I +EAL+N Sbjct: 610 SLRPAAIDAGIVAALEWLAAEFSRDGRVACHLRIPDDNLVLDEARAIALFRIVQEALTNV 669 Query: 511 LKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVR 570 +H+ A++V +++ Q L + D+GCG A R +G++ MR+R L G+ V Sbjct: 670 ARHAAATQVTISLEQTGRCWVLEISDDGCGFDSMAARMKSFGLVGMRERVLMLGGEISVC 729 Query: 571 RRESGGTEVVVTFI 584 GT + V Sbjct: 730 SAPGSGTSITVCIP 743 >UniRef50_D1C6S2 Histidine kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S2_SPHTD Length = 456 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 131/260 (50%), Gaps = 6/260 (2%) Query: 330 LKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVME 389 ++ L ++G L T +G S Q+L+ + + L + R ++ + V+E Sbjct: 181 MRVPLQARGHRHGTLRLTRSRGE-FSRADQRLLRAIGDTLGMAIENARLHQQVHEAAVVE 239 Query: 390 ERATIARELHDSIAQSLSCMKMQVSCLQ-MQGDALPESSRELLSQIRNELNASWAQLREL 448 ER IARE+HD +AQ L+ + +++ + + +++R + +R +++ +RE Sbjct: 240 ERGRIAREMHDGVAQMLAYVLVKLGTVDGLLAAGAADTARAEIETMRQAAESAYTDVREQ 299 Query: 449 LTTFRLQLTE-PGLRPALEASCEEYSAKFGFPVKLDYQ-LPPRLVPSHQAIHLLQIAREA 506 + RL PGL L ++++ + V L+ LPP +P + +++IA+EA Sbjct: 300 ILGLRLVTDGAPGLAAWLRTYLDDFAEQTDLDVTLEIDDLPPGALPRASELQVIRIAQEA 359 Query: 507 LSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI--RSNHYGMIIMRDRAQSLR 564 LSN KH+ A V V + + LTV D+G G ++ + +H+G++ MR+RA+SL Sbjct: 360 LSNVRKHADARSVRVRCTVEEGDLILTVADDGRGFDPSSANRQGHHFGLLTMRERAESLG 419 Query: 565 GDCRVRRRESGGTEVVVTFI 584 G ++ + GT + + Sbjct: 420 GTLQIESQPGSGTRITLRAP 439 >UniRef50_B8HT67 GAF sensor signal transduction histidine kinase n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HT67_CYAP4 Length = 652 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 76/301 (25%), Positives = 135/301 (44%), Gaps = 10/301 (3%) Query: 291 TDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVG----DRGTT--LKWRLADSHTQYGIL 344 D ++ + D+T D Q+ + VG RG T L L + G L Sbjct: 347 WDHNSDYPPYFLIEDITTDPHIGQVSAQIDTDVGAWFSQRGVTRLLNIPLWLNEKTIGAL 406 Query: 345 LATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQ 404 LP R + Q L T +Q+T L++ QQ I++EER IA ++HD++AQ Sbjct: 407 DIWLPSHRCFNRSQIDLAYTFGQQITLASYLNQMFTEVQQTILLEERNRIASDIHDTLAQ 466 Query: 405 SLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTE-PGLRP 463 + + + +Q+ + P++ ++L I A+ R + TE L Sbjct: 467 AFTGISLQLEVAKPLIQQEPQTVEQILQHISQLAKNGLAEARRSVWALYPPGTEYANLAH 526 Query: 464 ALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTV 523 L S E+ S ++++ P + + ++LL+I +EAL+NALKHSQA V + + Sbjct: 527 MLYDSVEQMSRNTPISIEVNLLGQPCPIAPYIGMNLLRIGQEALTNALKHSQAQAVWIEL 586 Query: 524 AQNDNQVKLTVQDNGCGVPENA---IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVV 580 + V L+++DNG G + +G++ M +R + + + GT+++ Sbjct: 587 TYTPDLVLLSIRDNGRGFTPPTNLDNLNGGFGLVGMYERCDRIGAQISILSQPGQGTQIL 646 Query: 581 V 581 V Sbjct: 647 V 647 Score = 53.0 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 1/84 (1%) Query: 314 QLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATL 373 Q ++P+G + L + G L +P+ + +Q +L L Q+T Sbjct: 174 QWVICALVPLGLP-KEINVPLFLGDSTIGALTIHVPREHQFTAEQVELAQALAHQVTLAA 232 Query: 374 ALDRHQERQQQLIVMEERATIARE 397 + R + +Q + E+ A+E Sbjct: 233 EMQRLAQESKQAAIAREQERAAQE 256 >UniRef50_D1C657 GAF sensor signal transduction histidine kinase n=2 Tax=Bacteria RepID=D1C657_SPHTD Length = 492 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 89/390 (22%), Positives = 146/390 (37%), Gaps = 43/390 (11%) Query: 234 VQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDD 293 + A L +NQ L L +A + S+ L L V++ + L R L + + Sbjct: 76 IGRMQASLAEQNQELLALHEAGLAITSQLDLQTVLQKVVDEARELVGARYGALTLLSEEG 135 Query: 294 EE------------------------------NHQEFTCQPDMTCDDKGCQLCPRGVLPV 323 + PD+T D + P + Sbjct: 136 WPEAFLTSGLTPEERERIGPEPVGHGMLGVVMSDGVVLRIPDVTKDPRSFGFPPHHPV-- 193 Query: 324 GDRGTTLKWRLADSHTQYGILLATLPQG-RHLSHDQQQLVDTLVEQLTATLALDRHQERQ 382 + L + G L T +G Q ++ Q + R +R Sbjct: 194 --MRSLLAVPIRSHGRILGSLYLTEKEGASEFDAADQARLERFATQTALAIENARLHQRV 251 Query: 383 QQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG-DALPESSRELLSQIRNELNAS 441 Q L + EER IARE+HDS+AQ L + + Q + E + E + Q+ + Sbjct: 252 QALAIAEERERIAREMHDSLAQVLGYVNTKAQAAQELLRNGQQERASEQIGQLAQAARDA 311 Query: 442 WAQLRELLTTFRLQLT-EPGLRPALEASCEEYSAKFGFPVKLDYQ---LPPRLVPSHQAI 497 +A +RE + R L E L+ + + + G PV + + + Sbjct: 312 YADVRENILGLRTSLEREREFLETLQDYLQRWQDQSGIPVDFRTTPAGITDLRLSPLAEL 371 Query: 498 HLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN---HYGMI 554 LL+I +EAL+N KHS AS V + ++ + TV+DNG G + I + +G+ Sbjct: 372 QLLRIIQEALANVRKHSGASRATVHIHRSAGWIGATVEDNGSGFDPSTIGRSAFPRFGLA 431 Query: 555 IMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 MR+RAQ++ G +R GT V V Sbjct: 432 TMRERAQAVGGTLEIRSAPGEGTRVAVRLP 461 >UniRef50_D1C9Z9 GAF sensor signal transduction histidine kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9Z9_SPHTD Length = 883 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 75/381 (19%), Positives = 146/381 (38%), Gaps = 37/381 (9%) Query: 243 HKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTC 302 +++ L+ + R S L E L + G+ + + + + D D++ T Sbjct: 496 ERSRALALMLATTRAAGSSLVLDEVLERLAEGIAEAAGVPNCAIYLLDEDEQSLVPAATV 555 Query: 303 QPDMTCDDK--------------------------GCQLCPR------GVLPVGDRGTTL 330 + D+ C P+ + L Sbjct: 556 VGPRSSFDRTRVGTTVVRVADSPTVRMVLGQREPFSCCQVPQMVGDDPALHAALGGACAL 615 Query: 331 KWRLADSHTQYGI-LLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVME 389 LA G+ + + + D+ QL+ + + + R + L + E Sbjct: 616 AVPLAAKGRILGVAFVFSETPCDGFTPDRIQLIRGVADSAGLAVENARLYAQSHGLAIAE 675 Query: 390 ERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELL 449 ER +A+E+HD++AQ L+ + + + PE + + + + + + R + Sbjct: 676 ERGRLAQEIHDTLAQGLTAISLHLDLADAYLPHKPEQAADKVRRALELTRQNLEEARRSV 735 Query: 450 TTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS 508 R +L + L AL ++ G + + + + L +IA EAL+ Sbjct: 736 LDLRAARLHQMSLPDALRRLVLTFTGDTGVEADFVVEGLVGRLSARVEMGLYRIAEEALN 795 Query: 509 NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR---SNHYGMIIMRDRAQSLRG 565 N +H+ A+ V V + ++ QV LTV+D+G G + AI +G++ +R+RA+ LRG Sbjct: 796 NVRRHATANHVRVALTASEGQVSLTVEDDGVGFAQEAIERDNGGGFGLMSIRERARLLRG 855 Query: 566 DCRVRRRESGGTEVVVTFIPE 586 + GT +VVT E Sbjct: 856 TLDLSSAPGEGTRLVVTIPAE 876 >UniRef50_UPI0001746019 hypothetical protein VspiD_01665 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746019 Length = 872 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 3/258 (1%) Query: 328 TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIV 387 +TL + + G L + H ++ +L L Q+ L L R + +L V Sbjct: 605 STLVVPMLLAGRVTGFLSIRFTRPPHFQTEEIELAQALAHQVILALQLIRLTQEGHRLAV 664 Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQ-MQGDALPESSRELLSQIRNELNASWAQLR 446 + ER +ARELHD++AQ ++ + MQ+ + L E+ + + R+ + + R Sbjct: 665 LAERNRMARELHDTLAQGITAVIMQLELAEDASARGLVEAVDPHVKRARDLARQTLREAR 724 Query: 447 ELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 + R Q L L AL A ++ + G ++ + P +P+ ++L+I +E Sbjct: 725 RSVRAMRPQALKAQDLPQALGALFKQMTEGSGMQAEVILRGIPCHIPTRCEENILRIGQE 784 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRG 565 L+NAL+H+ AS + + L + DNG G + + +G+ +R+R + + G Sbjct: 785 VLTNALRHAGASRFTGRLIFAPTAILLHLHDNGRGFDPQG-QHDGFGLTGIRERVEGMGG 843 Query: 566 DCRVRRRESGGTEVVVTF 583 +R R GT + + Sbjct: 844 RLCLRSRPGQGTSIRIRL 861 >UniRef50_C1CWD4 Putative histidine kinase, classic; putative membrane protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1CWD4_DEIDV Length = 575 Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 93/394 (23%), Positives = 151/394 (38%), Gaps = 15/394 (3%) Query: 211 MLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSP 270 +LG LN M + L + E + + L +A R+ L L+ Sbjct: 189 VLGGVLNLMG----RLWTRLTLGLLAPDRRDEAARREVVALRRAAGRVALGDDLGVTLTD 244 Query: 271 VLNGLQNLTLLRDIELRVYD----TDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDR 326 + + R + L D E H + P+ T + V G Sbjct: 245 LATQAWTASTARSVALVAPDGTPHATSGEGHPALSGLPERTPVPGEANVQ---VTADGAT 301 Query: 327 GTTLKWRLADSHTQY--GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQ 384 TL L S G L A G ++ + ++ + L + ER Sbjct: 302 LVTLPVTLPPSAGTLDGGTLRAVYQGGTRPGAEELAFLLSIADHAGTALHASQLIERAGA 361 Query: 385 LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQ 444 +ERA +ARELHDS+AQ+L + + + D P +RE L ++ Sbjct: 362 RAGEQERARLARELHDSVAQALYGITLGAKTARATLDRDPGRARESLDYTIRLAEGGVSE 421 Query: 445 LRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIA 503 ++ LL + R L E GL AL A+ G V + + P L P QA ++A Sbjct: 422 MKALLFSLRPDALEEGGLIAALTQHAHALEARHGLRVHAELRAEPHLTPDAQA-AAYRVA 480 Query: 504 REALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSL 563 +EAL N +KH++A++V + V ++ V ++V+D+G G + G MR+RA Sbjct: 481 QEALHNVVKHARATQVWLCVHESLGVVTVSVRDDGRGFDPASQGRGTLGQRSMRERAAGA 540 Query: 564 RGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTH 597 G V+ GT V + + + H Sbjct: 541 GGTLDVQSAPGEGTIVTLRIPAASAAPLQREEAH 574 >UniRef50_A6SWF1 Sensory box histidine kinase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SWF1_JANMA Length = 626 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 126/292 (43%), Gaps = 16/292 (5%) Query: 304 PDMTCDDKGCQLCPRGVLPVGDRGTTL-KWRLADSHTQYGILLATLPQGRHLSHDQQQLV 362 DMT D+ L R V+ G +W D + A S + + V Sbjct: 337 ADMTVDEYRAIL--RSVMTTGQPAEVSGRWTRPDGGI---VFFAVHAVAEFDSKGEAESV 391 Query: 363 DTLVEQLTATLALDRHQERQQQLI----------VMEERATIARELHDSIAQSLSCMKMQ 412 + +T+ + + + Q+L+ + +ER IARELHD +AQ LS ++M Sbjct: 392 LAISRNITSIIEAENQLRQSQKLLRQLADRSETSIEDERKHIARELHDDLAQHLSALRMN 451 Query: 413 VSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEY 472 VS ++++ L + + L+A+ R ++T R + G+ ALE +++ Sbjct: 452 VSVMKLEFGHLSSAFSGQAETMIERLDATIKIARNVITALRPTALDMGIVQALEWLVKDF 511 Query: 473 SAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKL 532 S +L ++ A + +IA+E+L N +H++A V V ++ D L Sbjct: 512 STHKEISCRLHIHDENLILSDRSATAIFRIAQESLRNISRHAEACNVDVNLSHKDGMCLL 571 Query: 533 TVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 ++D+G G + N +G++ +++R L G + E GT + V Sbjct: 572 AIRDDGRGFNTTNVPFNSFGLMGIKERVLILGGKVEIESEEGQGTTIRVNIP 623 >UniRef50_B8CZJ7 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ7_HALOH Length = 352 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 57/223 (25%), Positives = 114/223 (51%), Gaps = 7/223 (3%) Query: 365 LVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA-L 423 ++EQ L L++ ++L ++EER IARELHDS++Q+L + + ++ L++ D Sbjct: 132 VLEQQQEKLELEK---ENKKLAIIEERNRIARELHDSVSQNLFGINLNLNTLEVLIDEGD 188 Query: 424 PESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKL 482 + R+ + ++ + ++R ++ + L E ALE+ E Y ++ + Sbjct: 189 HDRVRKTVEDLKKMVQEVQTEMRLMIYELKPVHLREKDFFEALESLVELYRNRYNLKITT 248 Query: 483 DYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP 542 V S + L ++A+EAL+N +KH+ A +V +T+ +N + + ++DNG G Sbjct: 249 HLNGNENRVESEVQLALYRVAQEALNNIVKHADADKVSITLGIGNNGITMAIKDNGKGFN 308 Query: 543 ENAIRSNH--YGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 +++ +G+ M+DR + GD + + GT V V+ Sbjct: 309 VGRVKAGSGRFGISGMKDRVNDVGGDFDIESQPGQGTTVKVSI 351 >UniRef50_B9L060 Putative two component system histidine kinase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L060_THERP Length = 473 Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 90/380 (23%), Positives = 146/380 (38%), Gaps = 34/380 (8%) Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEEN-- 296 L ++ L+ L +A + + L L V++ + L R L V D + Sbjct: 75 RRLLMQHAELAALHEAGVAITADLDLALVLQRVIDEARRLAGARYGLLIVLDDQGQRTLF 134 Query: 297 ----HQEFTCQPDMTCDDKGCQLCPRGVLPVGDRG------------------TTLKWRL 334 + C+ + + R P+ + L + Sbjct: 135 TSGYPRTARCEQSTMGEHGILEAVLRDDRPLNIEDLDRYPGTRHYPEGHPTMRSLLGVPI 194 Query: 335 ADSHTQYGIL-LATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERAT 393 G L LA G+ + ++ Q +A R R L V EER Sbjct: 195 RSQEGVLGGLYLADREDGQPFDEHDRSRLERFATQAALAIANARLHRRLMSLAVHEERER 254 Query: 394 IARELHDSIAQSLSCMKMQVSCLQMQGDALP--ESSRELLSQIRNELNASWAQLRELLTT 451 IARE+HDS+AQ L + +VS L+ + L Q+ ++A +RE + Sbjct: 255 IAREMHDSLAQVLGYVITKVSALRELLRQPDRLAEAERHLEQLERAARDAYADVREAILG 314 Query: 452 FRLQLTE-PGLRPALEASCEEYSAKFGFPVKLDYQLPP---RLVPSHQAIHLLQIAREAL 507 R L L AL + E + + G +L + R + + LL+I +EAL Sbjct: 315 LRTGLAPNRSLVDALRSYVERWQDQSGVNARLIVEPSDDSLRGLQPMAELQLLRIVQEAL 374 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN---HYGMIIMRDRAQSLR 564 +N KH++A+EV V +A+ D V + V DNG G A+ +G+ MR+RA+++ Sbjct: 375 TNVRKHARATEVTVQLARLDGTVCVRVADNGIGFDPGALERGQFPRFGLATMRERAEAVG 434 Query: 565 GDCRVRRRESGGTEVVVTFI 584 G RV GT V Sbjct: 435 GRLRVTSLPGQGTTVEAVLP 454 >UniRef50_D1CB59 GAF sensor signal transduction histidine kinase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CB59_THET1 Length = 464 Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats. Identities = 80/386 (20%), Positives = 159/386 (41%), Gaps = 27/386 (6%) Query: 234 VQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYD--- 290 V AGL +N+ L L QA + L L +++ + L R L + Sbjct: 67 VSRLQAGLAQQNKELLALHQAGLDIAGELNLESVLQKIVDQARELVGARYGALLTINESG 126 Query: 291 ----------------TDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRG-TTLKWR 333 + +T + LP + L Sbjct: 127 LVDTYITSGFSPGGVKASELGAFTSYTSDHKPIRISGKEVVAHILSLPSDQAAHSLLTVP 186 Query: 334 LADSHTQYG-ILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERA 392 + G + +A R + + ++ + Q + R E+ + L + EER Sbjct: 187 ILSGDKVLGNLFVAGKESAREFTEEDEETLARFATQAALAIENARLHEQVKALAIAEERE 246 Query: 393 TIARELHDSIAQSLSCMKMQVSCLQMQGDALP-ESSRELLSQIRNELNASWAQLRELLTT 451 IARE+HDS+AQ L+ + + QM + + + + LSQ+ + ++++ +RE + Sbjct: 247 RIAREMHDSLAQVLTYVTTKGHATQMLLERGELDKASKNLSQLVDAARSAYSDVREQILA 306 Query: 452 FRLQLT-EPGLRPALEASCEEYSAKFGFPVKLDYQ-LPPRLVPSHQAIHLLQIAREALSN 509 R G + +++ + G PV+LD Q + + +++I +EALSN Sbjct: 307 LRTSQERNRGFIDVIREYAQKWQDQSGIPVELDIQQGLNIRLTPTTDLQVIRIVQEALSN 366 Query: 510 ALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN---HYGMIIMRDRAQSLRGD 566 KHS A++ +T+ + D+++ +T++DNG G +++ + +G+ +MR+RA+S+ + Sbjct: 367 IRKHSGATQAWITIYKRDDRLVVTIKDNGAGFDPSSLTRSDFPRFGLAMMRERAESVGAE 426 Query: 567 CRVRRRESGGTEVVVTFIPEKTFTDV 592 + GTE+ + K+ Sbjct: 427 LNIDTGPRQGTEIRLRIPLSKSELQA 452 >UniRef50_A3DEX1 Histidine kinase n=5 Tax=Clostridium RepID=A3DEX1_CLOTH Length = 392 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 52/215 (24%), Positives = 109/215 (50%), Gaps = 9/215 (4%) Query: 386 IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQL 445 EER +ARE+HD AQS+S + ++ + D+ PE +++ L +++ + + + Sbjct: 177 AQEEERQRVAREIHDGPAQSMSNIVLKAEICERLVDSDPEKAKDELRTLKSVVRDTLRDV 236 Query: 446 RELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAR 504 R+++ R L + GL P L+ E + G + + + ++ + ++ + Sbjct: 237 RKIIYDLRPMSLDDLGLIPTLQRYIETCREESGIKITFKTRGTCEQLKPVVSLTVFRLVQ 296 Query: 505 EALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN------HYGMIIMRD 558 EA++N KH++A +V + + + ++KL + DNG G ++++SN +G+I MR+ Sbjct: 297 EAVNNIKKHARADKVTINLEFLEKELKLYIADNGVGFDFDSLKSNEEDINKGFGLISMRE 356 Query: 559 RAQSLRGDCRVRRRESGGTE--VVVTFIPEKTFTD 591 R + L G + GT + V +PE+ ++ Sbjct: 357 RVELLDGKFEIDSAVGKGTRLNITVPLLPEEGVSN 391 >UniRef50_B7AAT7 Histidine kinase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT7_THEAQ Length = 564 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 88/448 (19%), Positives = 149/448 (33%), Gaps = 54/448 (12%) Query: 151 TVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMA 210 VV ++ L RLL+P ++ AS + R E+ Sbjct: 152 RVVWAGLFGLLWAVGLGGALGYLFLTRLLEPLSLMVQEASRLKEGQ-PARFPEPPH-ELG 209 Query: 211 MLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSP 270 LG ALN M AE+ L + + L L Sbjct: 210 ALGRALNAMGAEVRRRERDLRLLNRLLSE---------------MHALDLATLSERVLGL 254 Query: 271 VLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTL 330 ++ L + RV + + P + + V +G + Sbjct: 255 LVRELGFTCGDLWLSGRVVHCEACRDR-----CPLGGVASLAQEALASRQVVVRPQGVAV 309 Query: 331 KWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQL----- 385 + +G + + ++ L L L R E + Sbjct: 310 PVPPHGALVLHG-------RPEVEEAWLRAFLEALAGPLATALENARLYEALAEKEAQRA 362 Query: 386 --------IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNE 437 EERA IARELHD + Q+L+ + + + L + + ++ Sbjct: 363 RLLKAWLKAQEEERARIARELHDEVGQALTGLILGLEGL----------PGDRVEALKEL 412 Query: 438 LNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQA 496 + ++R L R L GL AL E++ + G V L L R +P Sbjct: 413 ARHTLTEVRRLALDLRPSVLDHLGLEAALRRYVREFAERTGVEVDLSLHLT-RPLPQELE 471 Query: 497 IHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIM 556 + ++ +EAL+N +HS + + V V + +V++ V+D G G A+ G++ M Sbjct: 472 TVVYRVVQEALTNVARHSGSPQASVGVVEVLGEVRVFVEDEGRGFDPEAVDPGRQGLLGM 531 Query: 557 RDRAQSLRGDCRVRRRESGGTEVVVTFI 584 R+R + L G V GT V V Sbjct: 532 RERVELLGGRLSVESAPGQGTRVQVRLP 559 >UniRef50_Q67MG9 Sensor protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG9_SYMTH Length = 558 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 62/287 (21%), Positives = 116/287 (40%), Gaps = 19/287 (6%) Query: 324 GDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQ 383 G + L GI++ +P R+LS ++++ L EQ+ + R ++ Sbjct: 257 HPSGRHITIPLGQGGKVAGIMVLMIPPSRYLSPSDREILTALGEQIGLAIDRARLYDQLA 316 Query: 384 Q-------------LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSREL 430 + +ER IARELHD I Q+L+ + + + L ++ E R+ Sbjct: 317 EKERLRGRLLARLITAQEDERRRIARELHDEIGQALTALVVTLDFL-VRHPLSEEMLRQR 375 Query: 431 LSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPR 489 L ++ ++R ++ R L + GL A+ Y G + + + Sbjct: 376 LVAVKEMAETGLTEVRRVIHEMRPTALDDLGLEAAIRWLVRRYED-AGLKIDVQIEGLEE 434 Query: 490 LVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN 549 +P + I + ++ +EA +N +KH+ AS + + + N + + V D+G G R Sbjct: 435 RLPDYIEITVFRLIQEACTNTVKHAAASHIRIALRHRGNWLTVEVTDDGKGFDIK-RRGE 493 Query: 550 HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDT 596 G+ +R+R G + GT V E +GDT Sbjct: 494 GVGLTGIRERVSLAGGKLTIESGPDSGTRVYAELPVEGAM--QRGDT 538 >UniRef50_B2T8J5 Multi-sensor signal transduction histidine kinase n=10 Tax=Burkholderia RepID=B2T8J5_BURPP Length = 553 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 90/398 (22%), Positives = 159/398 (39%), Gaps = 21/398 (5%) Query: 218 NMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRR-LHSRAPLCERLSPVLNG-- 274 EL+ + LEQ+V+++T L N LS RR + R ++ Sbjct: 158 QAETELSSARDALEQQVEQRTRQLAESNTRLSAQIDERRRAEANLQASEARFRTIVETSP 217 Query: 275 --LQNLTLLRDIELRVYDTDDE-----ENHQEFTCQPDMTCDDKGCQLCPRGVLPVGD-R 326 L ++ + L V + E + T D D + G Sbjct: 218 IPLCITSMPEGVILYVNEPLRELFGLDTGMRTLTNIVDFYIDPADRDRLVSHLRAEGSFN 277 Query: 327 GTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVD-TLVEQLTATLALDRHQERQ--- 382 + + R D + I A + L D T +++ L R+Q R+ Sbjct: 278 NSEVHMRRVDGSPFWAIATARVATFGDAPAIYVGLSDITSRKRIEQELFESRNQLRELSA 337 Query: 383 -QQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNAS 441 + I EER IA E+HD + Q L+ +KM VS L+M+ P++ R+ +R + + Sbjct: 338 YMEAIREEERKRIAMEIHDELGQLLTALKMDVSLLKMRLGKDPDAMRKA-DDMRELVEKT 396 Query: 442 WAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQ 501 + + R G+ ALE E++ + G P +L ++P A + + Sbjct: 397 IWMVCNVANHLRPVALNFGVVSALEWLVEDFIRRHGIPCQLHINGGEPVLPEACATAVFR 456 Query: 502 IAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN-HYGMIIMRDRA 560 I + +L+N +H+ A+ VT+ + L V D+GCG R+ YG++ M++RA Sbjct: 457 IVQASLTNVGRHAHATRADVTLTSTAAALDLHVSDDGCGFDPGMARTGYSYGLLGMQERA 516 Query: 561 QSLRGDCRVRRRESGGTEVVVTFIPEKT--FTDVQGDT 596 + + G + + GT + + IP D + D Sbjct: 517 RLIGGAMTIDSAQGMGTAISI-HIPLTGGAENDRRPDC 553 >UniRef50_A9B5L1 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L1_HERA2 Length = 581 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 85/389 (21%), Positives = 164/389 (42%), Gaps = 26/389 (6%) Query: 220 SAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLT 279 + +L + + LEQRVQ +TA L + L+ + L A + + L + L Sbjct: 204 AQDLEQLRSQLEQRVQAQTAELAQRTHRAEALYNISSALALPADITQILPLIAEQAHQL- 262 Query: 280 LLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPR---GVLPVGDRGT-----TLK 331 L V + NHQ P+ + Q P V+ + + L Sbjct: 263 ------LHVDYSWIMLNHQCLAAYPEAAVHEPHLQFEPTQNTSVMSISSKFGEHTALVLP 316 Query: 332 WRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEER 391 ++L + Q + A + Q + D + L + L +Q L R + + ++EER Sbjct: 317 FQLENDQVQLILAGAAIAQT---NTDDRALAEGLRDQAVLALNNQRLLAQVRDKAMLEER 373 Query: 392 ATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTT 451 +AR++HD++AQ L+ + +Q+ Q P S L+ + A+ R + Sbjct: 374 TRLARDIHDTLAQGLTGIVIQLGATQRALVYSPSESSTHLALASRMAREALAEARASVWN 433 Query: 452 FRLQLTEP-GLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNA 510 R L + L A++ + + V + + H LL+I +EAL+N Sbjct: 434 LRAPLLDANSLTKAIQELAA-HPMRSDLQVDVQIHGQVLRLDLHDETALLRITQEALANV 492 Query: 511 LKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR-----SNHYGMIIMRDRAQSLRG 565 +KHS+A V + + ++ V+L + DNG G + + +NH+G+I +R+R + G Sbjct: 493 VKHSKAEHVSIQLIYGNSSVELLIHDNGTGFDQAILTNQMQMTNHFGLIGIRERVAQIGG 552 Query: 566 DCRVRRRESGGTEVVVTF-IPEKTFTDVQ 593 ++ + V + + +P+ +++ Sbjct: 553 SLQLSNQHGALVHVQIPYNLPQTALVEME 581 >UniRef50_A6CIM0 Multi-sensor signal transduction histidine kinase n=1 Tax=Bacillus sp. SG-1 RepID=A6CIM0_9BACI Length = 619 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 76/368 (20%), Positives = 150/368 (40%), Gaps = 24/368 (6%) Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIEL-------------- 286 L + + L L+ +L+ P L + + L Sbjct: 235 LRAEKKRLKSLFIITSQLNQFVPGERWLHELKHNFSEFINADAFALWVKEDGNWYMQFQK 294 Query: 287 ----RVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYG 342 + + D E ++ + + D L L + + L G Sbjct: 295 GDNVQHTELDQEVANEFEEVKEPIIHGDLRTNLTKSRSLFNDRLKAFVYFPLRVEKETVG 354 Query: 343 ILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSI 402 +L+A + + + + Q + TL QL T+ + +++ I++EER IAR++HD I Sbjct: 355 MLVAARNRTKSFTDEDVQSIATLSNQLAVTIKTRMLFKEKEKRILLEERNRIARDIHDGI 414 Query: 403 AQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEP-GL 461 AQ+L+ M++ + + PE + +L+ + L S ++RE + R TE GL Sbjct: 415 AQTLAGAIMKLESAGRRFNKKPEETLKLMDESVYGLRDSLREVRESIYALRPYPTERVGL 474 Query: 462 RPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVV 521 A+ + E +F + + + + S L I +E+L N +KH++AS + + Sbjct: 475 SKAVGSKIEAVKKEFDLNISFEIRGEEIELSSMVEKVLFDIFQESLQNVIKHAKASSIEI 534 Query: 522 TVAQNDNQVKLTVQDNGCGVP-----ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGG 576 ++ + L ++D+G G NA H+G++ + D A+ + ++ +E G Sbjct: 535 LLSYQSENILLRIKDDGVGFSLFQAMLNARERPHFGILQINDSAEKINASLQIDSKEGEG 594 Query: 577 TEVVVTFI 584 TEV + Sbjct: 595 TEVTIIVP 602 >UniRef50_B2VGC1 HrpX protein (Hrp cluster) n=6 Tax=Enterobacteriaceae RepID=B2VGC1_ERWT9 Length = 494 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 70/258 (27%), Positives = 129/258 (50%), Gaps = 12/258 (4%) Query: 331 KWRLADSHTQYGILLATLPQGRHLS---HDQQQLVDTLVEQLTATLALDRHQERQQQLIV 387 R + G+L++ + GR ++ + +++L D+ + R RQ+++ Sbjct: 233 HIRCVPEFDRNGVLISVMCVGRDITAIHYAEKKLEDSHMRL--------RLLARQREVSR 284 Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRE 447 EER IARE+HD + Q L+ ++M +S L++Q E + + + + +R Sbjct: 285 EEERKRIAREIHDELGQHLTSLRMGISMLRIQFSKDNPLLHERVVHLMGLTDKTIQVVRN 344 Query: 448 LLTTFRLQLTEPGLRPALEASCEEY-SAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREA 506 + T R + + GL PALE +E+ S G +L + QA ++A+E+ Sbjct: 345 VATRLRPNVLDMGLTPALEWLRDEFISRHIGCCCRLITPEKEVRLGDEQATAAFRVAQES 404 Query: 507 LSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGD 566 L+N +H+QASEV++ + ++ V LTV+DNG G + N +G++ MR+R + L G Sbjct: 405 LTNISRHAQASEVIILLVRHAGSVVLTVRDNGRGFDCQNGKDNAFGLMSMRERGRMLGGR 464 Query: 567 CRVRRRESGGTEVVVTFI 584 + + S GT + +T Sbjct: 465 VDIESKPSIGTCISLTIP 482 >UniRef50_B6JD37 Signal transduction histidine kinase containing PAS/PAC sensor domain n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD37_OLICO Length = 358 Score = 229 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 3/229 (1%) Query: 367 EQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPES 426 ++L A+ R Q + EERA IARELHD + Q+L+ MKM + L+ + A + Sbjct: 127 DELVASRTQLRALSHYLQTVREEERAHIARELHDELGQTLTAMKMDLVWLRERLSADNGA 186 Query: 427 SRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQ 485 + + ++ + S L+ + + R L E GL A+ + + + + L + Sbjct: 187 LKPRVERLVGLADRSVTDLQRIASDLRPLMLDELGLVSAVHWLTDTVAGQSNLNINLSFD 246 Query: 486 LPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENA 545 + +I +EAL+N ++HS A V +T ++++ + + D+GCG+P A Sbjct: 247 REDLTYGPEVSTAAFRIVQEALTNIVRHSGARHVTITACHAEDELHIEIVDDGCGLPPTA 306 Query: 546 IRSN-HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQ 593 H+G++ M +RA L G V GGT V + P K Q Sbjct: 307 ASPRLHHGLLGMHERANMLGGSVAVESAPGGGTRVRASL-PLKQRPAAQ 354 >UniRef50_C4DRB4 Signal transduction histidine kinase, COG4585 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DRB4_9ACTO Length = 422 Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 122/273 (44%), Gaps = 8/273 (2%) Query: 314 QLCPRGVLPVGDRGTTLKWRLADSHTQY-GILLATLPQGRHLSHDQQQLVDTLVEQLTAT 372 PRG+ G L + + + G ++ T+ + + + L ++ A Sbjct: 150 PEAPRGLWQGLTLGDLLFPTVGVAVASFIGAMMRTVEREAIRRREVNARLVALADENAAL 209 Query: 373 LALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLS 432 A R E+ +Q V ERA +AR++HD++AQ L+ + Q+ + A P+ + L Sbjct: 210 QA--RLVEQARQAGVTAERARLARDMHDTVAQGLAGIVTQLETAE----ADPDDTARRLR 263 Query: 433 QIRNELNASWAQLRELLTTFRLQL-TEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLV 491 R+ S ++R + R L + L AL + + + P + Sbjct: 264 IARDLARDSLVEVRRSVAALRPALLDDADLAEALAREVDAWRHRNDIAATFTVTGTPVPL 323 Query: 492 PSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHY 551 + +L++A+EALSN +H++AS + VT++ ++ + L ++D+G G +A + Sbjct: 324 DAAVDEAVLRVAQEALSNTARHAKASRLGVTLSYMEDMLVLDIRDDGEGFAVDAEPRQGF 383 Query: 552 GMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 G+ MR R + L G + + GT V V+ Sbjct: 384 GLTAMRQRVEQLDGSVHIESKPGAGTAVSVSLP 416 >UniRef50_Q0A821 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A821_ALHEH Length = 446 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 89/388 (22%), Positives = 152/388 (39%), Gaps = 39/388 (10%) Query: 235 QEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDT--- 291 ++ L + + + L+ + L LS L L T +R D Sbjct: 48 NDEIVALRERARAMEVLYTLSTSSERCDDLETLLSGALEQLMRATGATAGVVRRMDAEGT 107 Query: 292 ----------DDEENHQEFTCQPDMTCDDKGCQLC------------PRGVLPVG-DRGT 328 DD + D C + + C R P+G + Sbjct: 108 LRLVAARGVGDDYPENDCGVRPEDCACGEAALRGCLISNPGMKGCRHKRYQRPIGHEDLH 167 Query: 329 TLKWRLADSHTQYGILLATLPQGRHLSHDQQ----QLVDTLVEQLTATLALDRHQERQQQ 384 L L + G+ L + L QQ +++ E L + R + + Sbjct: 168 LLAVPLTADDRRLGVFSLFL-EPVMLQQWQQLNLHRMLQMAGEHLGLAMERIRRESEARL 226 Query: 385 LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ--GDALPESSRELLSQIRNELNASW 442 + +ER+ I ELHD +AQ L+ + ++V L+ G P R L +R L+ ++ Sbjct: 227 QSLEQERSQITHELHDCLAQRLAALGLEVRNLEASHGGGRAPGGLRAGLRHVRRGLDQAY 286 Query: 443 AQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQI 502 +LR+L+ FR+ L GL PAL+ + G V L + P + Q +L+I Sbjct: 287 GELRQLMGQFRIALEGGGLEPALKRLVHRFQRDSGIRVLLSHDWPRGRLSPDQEFQVLRI 346 Query: 503 AREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPE------NAIRSNHYGMIIM 556 +EAL+N HS A V V + + ++L V+D+G G + + +H G+ +M Sbjct: 347 VQEALNNVRNHSGARHVQVALHRIGCDMELVVEDDGRGFADSPPDHRDGDDGHHLGLGVM 406 Query: 557 RDRAQSLRGDCRVRRRESGGTEVVVTFI 584 RDRA ++ G ++ GT + V Sbjct: 407 RDRADAIGGHLEIQSELGEGTRIAVYLP 434 >UniRef50_D1CE67 Multi-sensor signal transduction histidine kinase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CE67_THET1 Length = 748 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 81/378 (21%), Positives = 147/378 (38%), Gaps = 23/378 (6%) Query: 220 SAELAESYAVLEQRVQEKTAGLEHKNQILSFLW-QANRRLHSRAPLCERLSPVLNGLQNL 278 + E A + L++ + E+ + ++ L + S + + + G Q Sbjct: 375 AVENARLLSDLQKSEAQYRLVTENASDLIFLLNPDGSISFASSS------AKAILGYQPD 428 Query: 279 TLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSH 338 LL + + + E P + D+ C + L+ Sbjct: 429 ELLGKMFADLISPQSKRITPECLINP--STADELSIRCEIEAIRKDGNSVFLEISCTPVF 486 Query: 339 TQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQ------LIVMEERA 392 G+ R ++ +++++ + + + +E+ EER Sbjct: 487 EN-GVFRGEQGTARDIT-EKKRMEREIARRQRQLRRSQKREEQLSGYAAAVIAAQEEERR 544 Query: 393 TIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTF 452 IAR+LHD AQ+L + ++ L+ LPE+++ + ++ + + A +R Sbjct: 545 RIARDLHDDTAQALIALSRRIDSLREDLGDLPEAAQRKIEDLKALTDQTLASVRRFSRDL 604 Query: 453 RLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNAL 511 R L + GL PALE E + ++ +L Q R + + L +IA+EAL+N Sbjct: 605 RPSILDDLGLVPALEWLVSENAKRYKITTRLKIQGEERRLQPEVELALFRIAQEALNNTA 664 Query: 512 KHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENA-----IRSNHYGMIIMRDRAQSLRGD 566 KHSQA+ V + D +LTV DNG G G++ M +RA L G+ Sbjct: 665 KHSQATGAAVELTFGDTWCRLTVSDNGIGFQTPPNISELADRGRMGVMGMYERANLLGGN 724 Query: 567 CRVRRRESGGTEVVVTFI 584 VR GT + VT Sbjct: 725 LYVRTAPGQGTRITVTVP 742 >UniRef50_B8G147 Multi-sensor signal transduction histidine kinase n=2 Tax=Desulfitobacterium hafniense RepID=B8G147_DESHD Length = 779 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 72/398 (18%), Positives = 165/398 (41%), Gaps = 49/398 (12%) Query: 235 QEKTA-GLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDD 293 ++KT+ + KN+ L+ L + ++ + L ++L LN + + + + +Y+ D Sbjct: 363 KKKTSMEIIRKNRELAALNELSKAISGHMNLKDKLYEALNTILQVVGKQAGWIFLYNERD 422 Query: 294 EENHQEFTCQPDMTCDD--------KGCQLCP--------------------RGVLPVGD 325 +N E CQ + ++ + C P + LP G Sbjct: 423 NDNKAELMCQIGILPEEALTQTKQFQSCSNFPKPNSNSIQVHSSLSTACSIKQLYLPDGT 482 Query: 326 RGTT-LKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRH------ 378 + + + L+ G+L + + L++++ QL + Sbjct: 483 KALSHVYVPLSYKDRVLGVLNIIASNLESFTKEDLNLLNSIGLQLGVAIENAELWVELNK 542 Query: 379 -QERQQQL------IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELL 431 + ++QL EER I+RELHD +QS++ + + + + + E + +L Sbjct: 543 KEMLRKQLLNKVITAQEEERKRISRELHDESSQSIAALGVGLKSVIEIMEFDKEYALTVL 602 Query: 432 SQIRNELNASWAQLRELLTTFRLQL-TEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRL 490 ++N ++ +L +++ R L + GL PA+ E + G + + P Sbjct: 603 EDLKNNTSSILKELHQIIYDLRPSLLDDLGLLPAIRWYVESRLSNTGIKPHVAFTGDPLR 662 Query: 491 VPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP-----ENA 545 + I + +I +E+++NA+K+S A + + + + + + ++D+G G Sbjct: 663 LTDETEITIFRIVQESITNAVKYSNAKNLYLGLEFGQDSLFVYIEDDGDGFNIEKALAQK 722 Query: 546 IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 +G++ M +RA+ + G+ ++ R + GT + + Sbjct: 723 DGKESFGLLGMTERAELIGGEIEIKSRSNNGTRIELKL 760 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 59/163 (36%), Gaps = 4/163 (2%) Query: 142 DRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRA 201 + + V + + ++ LL + L + +P ++L + A + D + Sbjct: 150 QNSILQWVYNVRKLMLNLTLYGVLLGAVAALILSTLITRPLKRLASYALRLGKGDLEEDI 209 Query: 202 NISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLE---HKNQILSFLWQANRRL 258 I G++E+ L LN M +L +L Q + LE + ++ + Sbjct: 210 VIRGKDEIVELALCLNRMRKDLFTGMQMLRQSEESNRTLLEAISAAGEGIAVFQDNLNKK 269 Query: 259 HSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFT 301 + + E+ L G LL + D++ + +E Sbjct: 270 GTMKFVNEQYEN-LTGYTKAELLEMEANEIIDSESGKQIEEVW 311 >UniRef50_B4WQU2 GAF domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WQU2_9SYNE Length = 1769 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 81/423 (19%), Positives = 147/423 (34%), Gaps = 50/423 (11%) Query: 210 AMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLS 269 A L L ++ E ++ A+L+++ + + + L + L + L + L Sbjct: 1346 ATLAIQLTRLAEEAKQT-AILQEQERAARQHVTELAKTNDALSETLTALTATPELNDFLG 1404 Query: 270 PVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTT 329 L+ + L +YD Q T Q D P T Sbjct: 1405 QNLSKMAEQVGANAAHLFLYDAAAHTLRQHITVQ-DGKVYQGNAPTDPDIFRHPIPANLT 1463 Query: 330 LKWRLAD------------------------------------------SHTQYGILLAT 347 W + G + Sbjct: 1464 RAWEIVVNSSKPFTLDENHPDAIEFFWPESILWHQAQGHTSAVCACMKVGDQPLGFIGFA 1523 Query: 348 LPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQ----QLIVMEERATIARELHDSIA 403 L+ +Q Q + L Q T +L L R E Q + ER +ARE+HD++A Sbjct: 1524 FTDRTLLTEEQLQFIQALTNQATLSLHLTRLAEAAQTNALSSALTSERNRLAREIHDTLA 1583 Query: 404 QSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLR 462 Q+ + + +Q+ + E S + + ++ R + R Q L L Sbjct: 1584 QAFTGVSLQLEAAKAAAPDNLEDSTYHIDRAGQLARRGLSEARRSVHALRSQALETDTLP 1643 Query: 463 PALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT 522 AL + E + + P +P + +LL+I +EA++NAL+H+QA + + Sbjct: 1644 NALRTALYEMTQSSPTQPHFRLKGTPFALPENIQTNLLRIGQEAITNALRHAQADNLTLL 1703 Query: 523 VAQNDNQVKLTVQDNGCGVPENAIRS-NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 + + QV+L+V D+G G ++ +G++ MR+R G GT + + Sbjct: 1704 LEFSPAQVRLSVTDDGTGCEISSFSELEGFGLMGMRERVYRFDGHFSFTSHPRRGTVIDI 1763 Query: 582 TFI 584 T Sbjct: 1764 TIP 1766 Score = 59.2 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 96/293 (32%), Gaps = 55/293 (18%) Query: 210 AMLGTALNNMSAELAE--SYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCER 267 A++ L +S E + E+ +++ A L NQ L ++ L + L Sbjct: 1147 AIVAIQLTRLSEEAKQAAILQEREKAAKKRAAQLTRSNQALK---RSLDSLAQQPELEAF 1203 Query: 268 LSPVLNGLQNLTLLRDIELRVYD----------------TDDEENHQEFTCQPDMTCDDK 311 L V++ T + L + D E +P Sbjct: 1204 LQRVVDEAAAQTGAKSGHLFLVDEKANCWFLQVSTDNGGDWRSVADMELWQRPLPLDAAP 1263 Query: 312 GCQLCPRGVLPVGDRG-------------TTLKWRLADSHTQ------------YGILLA 346 P+ ++ W L +HT G L Sbjct: 1264 EFSAKILQKQPIVIENLRETLRPGPHIWEPSIAWHLQRNHTSIICVPLVLGDRVLGFLGL 1323 Query: 347 TLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIAR----EL---H 399 H++ D +L L Q T + L R E +Q +++E+ AR EL + Sbjct: 1324 PFVGATHITQDDIELAQALANQATLAIQLTRLAEEAKQTAILQEQERAARQHVTELAKTN 1383 Query: 400 DSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNEL--NASWAQLRELLT 450 D+++++L+ + G L + + ++ + + +A+ LR+ +T Sbjct: 1384 DALSETLTALTATPELNDFLGQNLSKMAEQVGANAAHLFLYDAAAHTLRQHIT 1436 >UniRef50_A0R9R9 Possible sensor histidine kinase domain n=36 Tax=Bacillus cereus group RepID=A0R9R9_BACAH Length = 610 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 65/315 (20%), Positives = 138/315 (43%), Gaps = 8/315 (2%) Query: 279 TLLRDIELRVYDTDDEENHQEFT-CQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADS 337 LL+D ++R + +D E ++ F ++ ++ P + + + + L + Sbjct: 291 ILLKDGKVRSHISDHSEKNKAFEELSKNLVFNNWKIGTAPEDEIFDSVIRSLVYFPLIVN 350 Query: 338 HTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARE 397 G+ +A + + Q + T QL + Q++ +++EER IARE Sbjct: 351 GELVGMFVAVKSRTAGFFPEDVQSLATFSNQLANVVKTRILISEQEKRMILEERNRIARE 410 Query: 398 LHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QL 456 +HD IAQ+L+ + Q+ Q + P ++++ + +L S ++R + + Sbjct: 411 IHDGIAQTLAGVIYQLESAQKKYRDKPIDMQQIVEKSIKDLRGSLGEVRYSIYALKPYPT 470 Query: 457 TEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQA 516 + GL+ A+ + + ++ + + R + + + +E+L N +KH+QA Sbjct: 471 QQLGLKQAIASKIKSLKQEYELDITYHERGHARALSFSKERVIFDTLQESLQNIVKHAQA 530 Query: 517 SEVVVTVAQNDNQVKLTVQDNGCGVP-----ENAIRSNHYGMIIMRDRAQSLRGDCRVRR 571 + V ++ V L V+DNG G HYG++ M ++A+ L ++ Sbjct: 531 DKTDVLLSYQSEHVLLRVKDNGVGFSLFESMVKTKNEPHYGILHMNEQAEQLGATLQIDS 590 Query: 572 RESGGTEVVVTFIPE 586 GTE+ + IP+ Sbjct: 591 SVGKGTEITL-LIPD 604 >UniRef50_C5AIA0 Multi-sensor signal transduction histidine kinase n=24 Tax=Burkholderia RepID=C5AIA0_BURGB Length = 769 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 17/249 (6%) Query: 361 LVDTLVEQLTATLALDRHQERQQQL------IVMEERATIARELHDSIAQSLSCMKMQVS 414 ++ + E++ A AL +E ++L + EE+ IARELHD + Q L+ +KM +S Sbjct: 520 MMRDVTERVQAENALKASREELRELSANLQRVREEEKTRIARELHDDLGQQLTALKMDLS 579 Query: 415 CLQMQGDAL-----PESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEAS 468 ++ + S E L ++R ++A+ A +R + R L + GL PA+E Sbjct: 580 AVEHRLLRDGTGEAHASVVEPLREMRRLIDATVASVRRIAADLRPVMLDDLGLVPAIEWL 639 Query: 469 CEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDN 528 +++ ++G V+ P+ A L +I +EAL+N +H++AS V +T+ D Sbjct: 640 ANDFTNRYGIEVERRIDPGDVRFPNATATALFRIVQEALTNVARHAEASHVALTLGIEDR 699 Query: 529 QVKLTVQDNGCGVPENAIRS----NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 Q L + D+G G + R +G++ +R+RA L G R+ + G + +T I Sbjct: 700 QCVLRIVDDGVGADQADGRRAPDDKSFGLLGIRERAHMLGGTVRMETARNQGYALTIT-I 758 Query: 585 PEKTFTDVQ 593 P + D Sbjct: 759 PLPSTPDPN 767 >UniRef50_A5FQK5 Multi-sensor signal transduction histidine kinase n=5 Tax=Dehalococcoides RepID=A5FQK5_DEHSB Length = 1229 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 122/261 (46%), Gaps = 12/261 (4%) Query: 342 GILLATLPQGRHLSHDQQQLV------DTLVEQLTATLALDRHQERQQQLIVMEERATIA 395 G ++ T R L + + + E+ A L +R +L EERATIA Sbjct: 970 GKVIITDTLMRPLYDENHHFLGILGASRDISERKAAEYELHTLSQRLVEL-QEEERATIA 1028 Query: 396 RELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ 455 RELHD + QSL+ +K+ + + D+LP+ S +LL++ + ++ + +R + R + Sbjct: 1029 RELHDQVGQSLTVLKLMLDKAK---DSLPDRSEKLLAEAQPLVSELISSVRNMSLDLRPR 1085 Query: 456 -LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHS 514 L + GL PAL + +S++ G V + R + +I +EAL+N ++++ Sbjct: 1086 MLDDLGLLPALLWYFDRFSSQTGINVNFQHAGLKRKFSPQLGTAVYRIIQEALTNVVRYA 1145 Query: 515 QASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN-HYGMIIMRDRAQSLRGDCRVRRRE 573 V+V + NQ+ L +QD+G G + G+ M++R + L G + + Sbjct: 1146 GVDHVLVRARADKNQLALVIQDSGKGFNPAQRATGMSSGLKGMKERVRFLGGKLDIESKP 1205 Query: 574 SGGTEVVVTFIPEKTFTDVQG 594 GT ++V + + G Sbjct: 1206 GEGTHIIVELPLNEEMGRING 1226 >UniRef50_C1F9F5 Two component regulator propeller/histidine kinase domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9F5_ACIC5 Length = 1025 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 3/202 (1%) Query: 386 IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQL 445 V+ ER IARE+HD++AQ + + +Q+ + E +R L R+ +S Sbjct: 816 AVLRERTRIAREIHDTLAQGFAAVSVQLEVVSRLLPNATEGARHALDTARSLARSSLQDA 875 Query: 446 RELLTTFRLQLTEP-GLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAR 504 R + R Q +E L L + A +L+ R + L +IA+ Sbjct: 876 RTSIWDLRSQSSEQEDLATRLRKLADHLCAPANIKAQLEVNGAYRPLTPEVETELTRIAQ 935 Query: 505 EALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP--ENAIRSNHYGMIIMRDRAQS 562 EA+ NA++HS+ + + + ++ ++ Q++L+V+DNG G A R HYG+ M +RA+ Sbjct: 936 EAIVNAVRHSETASIALRLSFHERQIELSVRDNGRGFSGAPPAARPGHYGITGMHERAER 995 Query: 563 LRGDCRVRRRESGGTEVVVTFI 584 + G + R GTEV +T Sbjct: 996 IGGKLTIESRPGEGTEVHLTLP 1017 >UniRef50_O32198 Sensor histidine kinase liaS n=5 Tax=Bacillus RepID=LIAS_BACSU Length = 360 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 65/251 (25%), Positives = 123/251 (49%), Gaps = 10/251 (3%) Query: 354 LSHDQQQLVDTLVEQLTATL-----ALDRHQERQQQLIVMEERATIARELHDSIAQSLSC 408 L+ DQ + VE A+L Q + ++ ++ EER +AR+LHD+++Q L Sbjct: 109 LAADQLNEMAKRVELQVASLQKLSNERAEWQAQMKKSVISEERQRLARDLHDAVSQQLFA 168 Query: 409 MKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEA 467 + M S + + + + + + + + ++R LL R L GL+ L Sbjct: 169 ISMMTSAVLEHVKDADDKTVKRIRMVEHMAGEAQNEMRALLLHLRPVTLEGKGLKEGLTE 228 Query: 468 SCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND 527 +E+ K P+ +++ + + HL +I +EALSN +HS+AS+V V + + Sbjct: 229 LLDEFRKKQ--PIDIEWDIQDTAISKGVEDHLFRIVQEALSNVFRHSKASKVTVILGIKN 286 Query: 528 NQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI--P 585 +Q++L V DNG G + ++++ YG+ M++RA + G V E GT++ V P Sbjct: 287 SQLRLKVIDNGKGFKMDQVKASSYGLNSMKERASEIGGVAEVISVEGKGTQIEVKVPIFP 346 Query: 586 EKTFTDVQGDT 596 E+ + + + Sbjct: 347 EEKGENERDSS 357 >UniRef50_Q3M1D8 Serine/threonine protein kinase and signal transduction histidine kinase with GAF and PAS/PAC sensor n=9 Tax=Bacteria RepID=Q3M1D8_ANAVT Length = 2361 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 110/211 (52%), Gaps = 3/211 (1%) Query: 378 HQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNE 437 Q++ ++ ++EER +ARE+HD++AQ+ + + QV + E+++ L I+ Sbjct: 2151 AQKQAEEASILEERNRMAREIHDTLAQAFTGILAQVGAAKQVLTDDVEAAQAHLDLIKEL 2210 Query: 438 LNASWAQLRELLTTFRLQLTEPG-LRPALEASCEEY-SAKFGFPVKLDYQLPPRLVPSHQ 495 + R + R QL E G L+ AL + +A + + + +P+ Sbjct: 2211 ARTGLTEARRSVIALRPQLLEEGSLQSALHRLVAQIRAAATDTTLYYEIEGAVYSLPTEV 2270 Query: 496 AIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR-SNHYGMI 554 +LL+I +EAL+NA++++ A E+ V + + +Q L V+DNG G +I S +G++ Sbjct: 2271 ENNLLRIGQEALTNAIRYANADEIRVELVYDRDQFCLRVRDNGQGFGVGSISASEGFGLL 2330 Query: 555 IMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 M +RA+ + +R + GTE++VT P Sbjct: 2331 GMSERAERIGAQLTIRSQPGQGTEIIVTVNP 2361 >UniRef50_Q81FX4 Two-component sensor protein yvqE n=44 Tax=Bacillus cereus group RepID=Q81FX4_BACCR Length = 351 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 7/229 (3%) Query: 361 LVDTLVEQLT----ATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL 416 L L EQ T E +Q + +ER +ARELHDS++Q L M M +S + Sbjct: 116 LARRLEEQAGLFQKVTNERAHWNEEMRQEAISQERHRLARELHDSVSQQLFAMSMMMSAI 175 Query: 417 QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAK 475 Q P+ +++ L + N + + +++R LL R QL L +E E S K Sbjct: 176 NEQITEFPDVTKKQLQLVENMVVNAQSEMRALLLHLRPVQLEGKKLTEGIEELLTELSRK 235 Query: 476 FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQ 535 ++ + + P + HL +I +EALSN L+H++A + V + + D L + Sbjct: 236 QHMKIE--WLIEPIELKKGVEDHLFRIVQEALSNTLRHAKAKKTEVRLRKIDQYAILKII 293 Query: 536 DNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 D+G G ++ YG+ M++R + G +V + GT++ V Sbjct: 294 DDGVGFEVGVNKAGSYGLRSMQERVHEIGGTLKVLSFPAKGTQIEVKVP 342 >UniRef50_Q3SG40 GAF Sensor Signal Transduction Histidine Kinase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SG40_THIDA Length = 415 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 86/370 (23%), Positives = 152/370 (41%), Gaps = 32/370 (8%) Query: 247 ILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENH--QEFTCQP 304 L L + L + A + + L L+ + L + +RV D P Sbjct: 33 ALRVLSEITTSLSTDANVEQLLGRFLSTMIRLAGAQGGAVRVITDDRTHLRLIASVGLPP 92 Query: 305 DMTCDDK----GCQLCPRGVLPV---------------------GDRGTTLKWRLADSHT 339 D+ + C +C + V G T + L + Sbjct: 93 DLVEHEHLVSVDCGVCGKAAREVSVSSWNNVAYCKRQANDPYFSGTCSTVVAVPLMHKNQ 152 Query: 340 QYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELH 399 G+ L +G + D + L ++ E L L R ++ +M ER +A ++H Sbjct: 153 VMGVYNLFLEEGHVVPEDVRLLFRSISEHLGIALENARLTRENMRISLMNERQMLANQIH 212 Query: 400 DSIAQSLSCMKMQVSCLQMQGDALP-ESSRELLSQIRNELNASWAQLRELLTTFRLQLTE 458 DS+AQ+L+ KM+++ L + L + ++ ++A LR+L+T +R ++ Sbjct: 213 DSLAQTLAYAKMRLTVLSDAMRHEDYAKANRFLGDVEEAVDLAYADLRDLITQYRDRINP 272 Query: 459 PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASE 518 GL PA++ + + K V + + + I + I +E+L N KH++A Sbjct: 273 RGLVPAIQELAKGFRKKANADVDFLNLVQDVTLTPDEEIQVFHIIQESLYNIAKHARARH 332 Query: 519 VVVTVAQNDNQVKLTVQDNGCGV----PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRES 574 VV+T + Q + V D+G GV E++ +G+ IMR+RA L G V R + Sbjct: 333 VVITFDLENGQYIVNVADDGVGVQKKHDESSTLGKSFGLTIMRERAARLNGKLVVESRPA 392 Query: 575 GGTEVVVTFI 584 GGT V + F Sbjct: 393 GGTVVRLVFP 402 >UniRef50_B1ZR83 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Verrucomicrobia RepID=B1ZR83_OPITP Length = 742 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 63/256 (24%), Positives = 119/256 (46%), Gaps = 8/256 (3%) Query: 344 LLATLPQGRHLSHDQQQLVDTLVEQLTATLALD---RHQERQQQLIVMEERATIARELHD 400 ++ + + ++ V + TA L ++ R E Q V+ ER +AR+LHD Sbjct: 475 VIRERESAQRELQEAHDTLEQKVAERTAQLHVEMGARKTEEVQFRAVLAERTRLARDLHD 534 Query: 401 SIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEP 459 ++ Q+L+ + +Q+ E S+ L RN L+ S LR + R +L + Sbjct: 535 TLEQTLTGIALQLDTAAKLFGRDGEQSQHHLQLARNWLHQSQVDLRRSIWDLRSRELEQF 594 Query: 460 GLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEV 519 L AL S E+ + R +P ++L+I +EA +N KH++A V Sbjct: 595 DLAKALRQSAEQLVDGTSLTIDFRTTGDRRPLPEVVEENVLRIGQEAFTNIAKHARARRV 654 Query: 520 VVTVAQNDNQVKLTVQDNGCGVPENAIRS---NHYGMIIMRDRAQSLRGDCRVRRRESGG 576 + T+ + + ++L ++D+G G A S +H+G++ M +RA+ L G +V G Sbjct: 655 LATLTFSPSTLRLRIEDDGVGFNVPAAPSAAESHFGLLGMTERAKRLGGHIKVDSAPGQG 714 Query: 577 TEVVVTFIPEKTFTDV 592 T + + +P + ++ Sbjct: 715 TSLTLE-VPLEPLSER 729 >UniRef50_Q2SUK5 Two-component hybrid sensor and regulator n=33 Tax=Burkholderiaceae RepID=Q2SUK5_BURTA Length = 740 Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats. Identities = 66/243 (27%), Positives = 121/243 (49%), Gaps = 12/243 (4%) Query: 350 QGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLI------VMEERATIARELHDSIA 403 + L +L +VE+ A AL R +E +++ +ER IARELHD +A Sbjct: 485 RTSELQTANDELRREIVERERAEEALARSREELREIAAISSTAREQERGRIARELHDELA 544 Query: 404 QSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLR 462 Q+L+ +++ + + G+ L +++R L+ + A R + + R L + GL Sbjct: 545 QTLAMLRLDLERVSTTGNELAGR----FTEMRGLLDGAVAATRRIASDLRPLMLDDLGLV 600 Query: 463 PALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT 522 PA++ + + + G L P + QA +I +E+L+N +H++AS V + Sbjct: 601 PAIQWLVQAFQQRHGIGCTLIVDPPELDLVEPQASTTFRILQESLTNVGRHARASHVDIR 660 Query: 523 VAQNDNQVKLTVQDNGCGVP-ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 + +D +V L+V+DNG G EN + N +G++ +R+RA ++G V+ GT + V Sbjct: 661 LIADDREVMLSVRDNGVGFDTENPRKPNSFGLVGLRERAYLVQGTLSVQTAPGRGTAIEV 720 Query: 582 TFI 584 Sbjct: 721 HIP 723 >UniRef50_C1XTQ5 PAS domain S-box protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XTQ5_9DEIN Length = 682 Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 66/258 (25%), Positives = 116/258 (44%), Gaps = 3/258 (1%) Query: 328 TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIV 387 T + + G+L+ LP G ++ + + + + R E +++ +V Sbjct: 420 TVVCLPMRFREESVGVLVIYLPGGEP-GPNEMAFLTPIADLAAIAVENARLSEIKERQVV 478 Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRE 447 +EER +ARELHDS++Q+L + + Q + P++ +E L + A A++R Sbjct: 479 LEERQRLARELHDSVSQALYGIALGARAAQNAAERNPQALKEPLEYVLALAEAGIAEMRA 538 Query: 448 LLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREA 506 L+ R + L E GL AL A++ V+ + P + L ++A+EA Sbjct: 539 LIFELRPESLQEEGLVAALARQAAAVRARYELQVEARLEEEPE-LSLDAKEALYRVAQEA 597 Query: 507 LSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGD 566 + N +KH++A V +T+ V L VQD+G G H G MR+R++++ Sbjct: 598 IHNVVKHAEARRVWLTLESRPEAVLLEVQDDGKGFDPTQDFPGHLGQRSMRERSEAIGAR 657 Query: 567 CRVRRRESGGTEVVVTFI 584 V GT V V Sbjct: 658 LTVESAPGQGTRVQVRLP 675 >UniRef50_Q1IWU8 Multi-sensor signal transduction histidine kinase n=3 Tax=Deinococcus RepID=Q1IWU8_DEIGD Length = 574 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 76/364 (20%), Positives = 137/364 (37%), Gaps = 23/364 (6%) Query: 242 EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLL---------RDIELRVYDTD 292 + L L+ ++ + + + L+ V + +D LR+ Sbjct: 211 RQRTLDLMTLYSVDQSIRAERNMRRLLARVTRNMAERVRAGARAAYLRDQDGLLRLEYAQ 270 Query: 293 DEENHQEFTCQPDMTCDDKGCQLCP------RGVLPVGDRGTTLKWRLADSHTQYGILLA 346 + P + + L + + D G+L+ Sbjct: 271 HAGGESSSGALAPAFVERVAEAGMPLVASQQEAAEVFPEARSALGFPMRDDEGLVGVLVL 330 Query: 347 TLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSL 406 + + L+ L Q T + R ++L + +ERA IARE+HD +AQSL Sbjct: 331 GDARPEAFDGVRLPLLALLAGQATLAVRNARAYLYSEELAISDERARIAREIHDGVAQSL 390 Query: 407 SCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPAL 465 + +++ + Q + PE + + L ++R + R L GL + Sbjct: 391 AFCALKLDLVARQLHSDPEKAEAEVKAATGLLREQIREVRRSIFALRPIDLERYGLLETV 450 Query: 466 EASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ 525 E++ + L+ L P +A+ + +I +E+L+N KH++A EVVVT+ Sbjct: 451 RRYVEDFGQQNNLRTVLNVTGDIHLAPGDEAV-VFRILQESLNNVAKHARAREVVVTLH- 508 Query: 526 NDNQVKLTVQDNGCGVPENAIRS-----NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVV 580 +V L VQD+G G I G++ MR+R +S G+ RV GT V Sbjct: 509 GGERVTLRVQDDGQGFDPEQISGRVSSAGGLGLMQMRERVESRGGNYRVLSSPGHGTLVE 568 Query: 581 VTFI 584 Sbjct: 569 AEVP 572 >UniRef50_Q5SJ33 Sensor histidine kinase n=3 Tax=Thermus RepID=Q5SJ33_THET8 Length = 515 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 78/356 (21%), Positives = 151/356 (42%), Gaps = 14/356 (3%) Query: 230 LEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVY 289 L V + +++ L L++ ++ L + A L L +L+ ++ + + Sbjct: 162 LAHEVAGALQAVVARSRDLLTLFEVDQALKAEANLDRLLEGLLDRIRAWAGAEGGGVLLL 221 Query: 290 DTDD---EENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLA 346 D + Q + + +G PV L L G+L+ Sbjct: 222 DEEGFLLARVVQGLALPSHPFLPEGAWKAALQG--PVFVEKGVLALPLKAREP-VGVLVL 278 Query: 347 TLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSL 406 +G LS + + L Q+ + + + ++L + EER IARE+HD +AQSL Sbjct: 279 ---KGEDLSR-RIPFLSFLASQVALAVRNAQAYLKAEELAINEERTRIAREIHDGLAQSL 334 Query: 407 SCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPAL 465 + M +++ ++ + E++ L+++R L A ++R + R L G +L Sbjct: 335 AFMALKLDLVERLWEKDKEAALGALAEVRETLRAQIREVRRSIFALRPIDLERYGFLESL 394 Query: 466 EASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVA- 524 + ++ + GF V+L + + L ++ +EAL+NA KH++ + V V + Sbjct: 395 RRYAQAFAEQAGFRVQLSLP-ERVGLSQASELVLFRVLQEALTNAAKHARPTRVEVVLEP 453 Query: 525 QNDNQVKLTVQDNGCGVPENAIRS-NHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 + +L V+DNG G + +G+ MR+R ++ G V GTEV Sbjct: 454 LGERGARLVVRDNGRGFAVPEAQGLGGFGLTQMRERVEARGGRFWVVSAPGRGTEV 509 >UniRef50_A6SXZ6 Two-component sensor histidine kinase n=2 Tax=Oxalobacteraceae RepID=A6SXZ6_JANMA Length = 490 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 8/266 (3%) Query: 332 WRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQL------ 385 W ++ L AT S + ++ + + R + + +L Sbjct: 214 WVEEWKDIKWINLRATPRALEDGSVQWEGIMTNITASKLEQEEIIRSRAQLAELSEHVNT 273 Query: 386 IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQL 445 + +ER IARE+HD + +L+ +KM ++ L + E + + + ++ + + Sbjct: 274 VKEKERTRIAREIHDDLGGNLTAIKMALALLTRRLPGKSSELLEKAAYVESLVDRTIETV 333 Query: 446 RELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 + R + + GL A++ +E+ + G P + + QA L +I +E Sbjct: 334 HRIAGDLRPGILDFGLVAAIDWQSKEFEKQLGIPCEFVSNQAEIDLDLDQATALFRIFQE 393 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP-ENAIRSNHYGMIIMRDRAQSLR 564 AL+N KH+QAS V V + V+L + DNG G+ + + +G+ M +R+ ++ Sbjct: 394 ALTNIAKHAQASLVSVQLMHTPQYVRLEIIDNGRGIELADRAKPKSFGIRGMVERSVAMG 453 Query: 565 GDCRVRRRESGGTEVVVTFIPEKTFT 590 G V GGT V + P T Sbjct: 454 GSLSVSTAPKGGTVVAINL-PLPTTP 478 >UniRef50_C1XM57 Signal transduction histidine kinase, COG4585 n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XM57_MEIRU Length = 430 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 62/246 (25%), Positives = 117/246 (47%), Gaps = 5/246 (2%) Query: 340 QYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELH 399 + I +A L G L + L+ + + ++ +Q ++EER +ARE+H Sbjct: 176 AFFIFIAFLYSGYALFTLEL-LIREIRAREELERTRRELEQTSRQAGILEERQRLAREIH 234 Query: 400 DSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTE 458 D++AQ + + +Q+ +M + S+ L Q R ++ R ++ R + L Sbjct: 235 DTLAQGFASIVVQLEAAEMASEH-EASATHYLEQARQAAREGLSEARRMVWALRPEILEN 293 Query: 459 PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASE 518 L AL+ + + + G + PR + + LL+IA+EAL+N KH++A Sbjct: 294 TSLPEALQRLLQRWQQESGVRTQFTLTGTPRPLHPELEVGLLRIAQEALTNIRKHAKARH 353 Query: 519 VVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTE 578 +T++ D+ V + VQD+G G+ A + +G+ +MR+R +SL G + GT Sbjct: 354 ANLTLSYLDDLVLMDVQDDGVGL--QAPTTGGFGLRLMRERVESLGGQMTLESEPGMGTT 411 Query: 579 VVVTFI 584 + V+ Sbjct: 412 LAVSLP 417 >UniRef50_B5I2X6 Two-component system sensor kinase n=10 Tax=Streptomyces RepID=B5I2X6_9ACTO Length = 381 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 75/296 (25%), Positives = 119/296 (40%), Gaps = 10/296 (3%) Query: 298 QEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLAT-----LPQGR 352 P+ D + D L + D G L P+G Sbjct: 85 MLHEATPERLADVRKDPRFEGWPSAHPDLVDFLGLPIRDGDEVIGALFLANKNCPKPEGS 144 Query: 353 H-LSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKM 411 + + ++L+ L + L R ER ++L + EER+ +A ELHD+++Q L +++ Sbjct: 145 CGFTEEDEELLSILAQHAAIALTNARLYERSRELTIAEERSRLAHELHDAVSQKLFSLRL 204 Query: 412 QVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCE 470 D P ++ L Q+ + +LR + R L E GL L Sbjct: 205 TAQAAAALVDRDPSRAKGELHQVAVLAAEAADELRAAVVELRPAALDEDGLTATLRTQIH 264 Query: 471 EYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQV 530 V + R +P+ Q +L++A+EAL NAL+HS A V VT+ + + Sbjct: 265 VLDRAHTARVTFAAR-NFRALPAAQEEAMLRVAQEALHNALRHSGAEHVDVTLDRRGSGA 323 Query: 531 KLTVQDNGCGVPENAIR--SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 L V D+GCG AIR H G++ MRDR + G V GT + + Sbjct: 324 VLRVTDDGCGFEPKAIRRAGRHLGLVSMRDRTSGVGGTLTVESAPGKGTTIEMEVP 379 >UniRef50_D2B7Q9 Histidine kinase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B7Q9_STRRD Length = 412 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 5/234 (2%) Query: 352 RHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKM 411 LS + L +L E + + ++ V++ER +ARE+HD++AQ L+ + Sbjct: 175 EELSRTNRLLEASLAENAGLH---AQLLAQAREAGVLDERQRMAREIHDTLAQGLTGIIA 231 Query: 412 QVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPG-LRPALEASCE 470 Q+ + Q +P R ++N S A+ R + R + + L AL + Sbjct: 232 QLQAAE-QMHEVPAPWRRPFGAVKNLARESLAEARRSVDALRPEPLQTARLSDALAGVAD 290 Query: 471 EYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQV 530 +S G PV++ R + LL+ A+EAL+N KH+ AS V VT++ + +V Sbjct: 291 RWSKLHGLPVQVTTTGTARPMTPEAEFALLRTAQEALANVAKHAGASRVGVTLSYLEQEV 350 Query: 531 KLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 L V+D+G G ++ + +G+ IMR R + L G RV G + Sbjct: 351 ALDVRDDGKGFDLASLEAGGFGLTIMRQRVEGLSGSLRVESEPGAGAGISACVP 404 >UniRef50_Q1CZ92 Sensor histidine kinase n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1CZ92_MYXXD Length = 1080 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 10/237 (4%) Query: 351 GRHLSHDQQQLVDTLV-EQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCM 409 GR+L+ Q E+ A R + + EER +ARELHD Q+L+ + Sbjct: 827 GRNLALRTLQAEREQALEEAEAGRERLRRLTMRLEAAKEEERKHLARELHDEFGQALTAV 886 Query: 410 KMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEAS 468 K+ + + + S L ++ ++ Q+R L R QL E GL ALE Sbjct: 887 KLNLGLM----NTFASPSVTRLPEVVALIDRLIGQVRALSVDLRPPQLDELGLVAALEWY 942 Query: 469 CEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDN 528 E + + G + P + + I + +I +EA++NAL+H+ A + V + Sbjct: 943 LREVARRSGVELVFTASSAPPSLSKGRDIAVFRIIQEAVTNALRHASARRIDVRLETVGC 1002 Query: 529 QVKLTVQDNGCGVPENAI----RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 ++L V+D+G G N + +G+ M++R + L G V R GT VV Sbjct: 1003 VIRLEVRDDGKGFDVNQVLMGRGPGSFGVFGMQERVRDLGGHFEVTSRPGEGTRVVA 1059 >UniRef50_Q1AVR5 Periplasmic sensor signal transduction histidine kinase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVR5_RUBXD Length = 407 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 12/281 (4%) Query: 306 MTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTL 365 + D RGVL ++ + W LA GI + R +H Q + L Sbjct: 132 LLFGDILWAHPQRGVLWALEQAASWSWPLAF---VIGICTLAVESMRRQAHAQ----ELL 184 Query: 366 VEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPE 425 E A L R+ ER ++L V EER IARE+HD++ L+ + +Q+ P Sbjct: 185 AELEEAHAELRRYAERARELAVSEERNRIAREIHDAVGHHLTVVNVQLEAAGKLLARDPG 244 Query: 426 SSRELLSQIRNELNASWAQLRELLTTFRLQLTE--PGLRPALEASCEEYSAKFGFPVKLD 483 + E +++ ++ + + ++ R + + E GLR AL+ E+ G V + Sbjct: 245 RAAEAVARAKSSASEALSEARRAVRALKPPSMEGRAGLR-ALDDLVREFHG-SGVAVSFE 302 Query: 484 YQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPE 543 R +P L + +E L+NAL+HS A V V + V+L+V+D+G G E Sbjct: 303 VSGERRPLPPEVEFILYRALQEGLTNALRHSGADRVEVRLDLCGEAVRLSVRDDGRGTSE 362 Query: 544 NAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 A +G+ +R+R G GG + V Sbjct: 363 GA-SGGGFGLEGLRERVAEAGGRISAGDARGGGFALEVELP 402 >UniRef50_Q814L6 Two-component sensor protein yhcY n=40 Tax=Bacillus RepID=Q814L6_BACCR Length = 523 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 67/304 (22%), Positives = 122/304 (40%), Gaps = 8/304 (2%) Query: 282 RDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQY 341 +++ LR +E D+ + + V + + + + Sbjct: 226 KELSLRASYVQEELQEDVKEAAKKALEQDEPVLIKHQIGHNVHLNRAVIATPIHIQNHIF 285 Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 G+L +L G + ++ L ++ + R E++++L+ MEER +AR+LHDS Sbjct: 286 GVLCVSLNNGE-FDANTIDVIQALSNHVSLIIENLRLNEQRRELVRMEERNRLARDLHDS 344 Query: 402 IAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGL 461 ++Q L + + E + L ++R + ++R L+ R E GL Sbjct: 345 VSQKLFSLTFMTKGAEAVLKGKNEKVDQSLHEMRELAQGALKEMRTLIWQLRPAGLEKGL 404 Query: 462 RPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVV 521 PAL ++Y G ++ R +P L +I +EAL+N KH+ E + Sbjct: 405 LPAL----KQYGENLGLKIREQVTG-VRDLPRVVEEALWRIGQEALNNVSKHAGVKEATI 459 Query: 522 TVAQNDNQVKLTVQDNGCGVPENAIRS-NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVV 580 N+ V L + D G G E I+ GM MR+R + + G ++ T V Sbjct: 460 YFTVNEKNVSLEIVDQGKGFVEKNIKEKKSLGMTTMRERVELVGGTIKIVSSNKR-TSVK 518 Query: 581 VTFI 584 V Sbjct: 519 VNVP 522 >UniRef50_Q47G83 PAS n=1 Tax=Dechloromonas aromatica RCB RepID=Q47G83_DECAR Length = 683 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 67/366 (18%), Positives = 144/366 (39%), Gaps = 11/366 (3%) Query: 223 LAESYAVLEQ-RVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLL 281 L + + LE+ EK + + +++ + E+L + + Sbjct: 322 LRKEHLQLERDASNEKLRHMVQSVRDAILTVDSSQNIVLFNSAAEQLWGIRAADVLDQNI 381 Query: 282 RDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQY 341 LR N + + + D L G++ + + L+ S T Sbjct: 382 EQFLLRSQPKIVASNLLGYLREAWQSPSD----LALLGIVSLVRDDQDIPVELSLSSTTV 437 Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 R LS Q+ ++ L + + + +ER I+RELHD Sbjct: 438 RGERLVTAIFRDLSERQRTELELLKSNRQL-----QELTASLESVREQERLRISRELHDE 492 Query: 402 IAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPG 460 + Q+L+ ++M++S L + + + I+ ++ + +R + + R L + G Sbjct: 493 LGQALTGLRMEISWLGGRLLTTQPELEQKVVSIKKLIDGTIKSVRRISSELRPLVLDDLG 552 Query: 461 LRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVV 520 A ++++ + V L+ A L ++ +E+L+N +H+ A V Sbjct: 553 FAAAANWYVDQFATRTNLKVTLELPNDDPENGGTVATTLFRVLQESLTNVARHAGARNVD 612 Query: 521 VTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVV 580 + + Q ++Q +L ++D+G G +++ + G+I MR+R Q+L G + GT + Sbjct: 613 IRLLQANDQWRLEIRDDGQGFDQSSAKMGGIGLIGMRERVQALGGSFELTAAPGQGTLIE 672 Query: 581 VTFIPE 586 + E Sbjct: 673 ICIPVE 678 >UniRef50_C3B362 Two-component sensor protein yhcY n=4 Tax=Bacillus RepID=C3B362_BACMY Length = 374 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 72/374 (19%), Positives = 142/374 (37%), Gaps = 38/374 (10%) Query: 242 EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFT 301 E + + L L + L+ L E L VL+ L + L+ + D Sbjct: 7 EKQMRRLEALKEIAELLNEATDLQEMLEKVLHTLLQVMNLQTGWIFFIDEKGTHRMLVDR 66 Query: 302 CQPDMTCDDKGCQLCPRGVLPVG-------------------DRGTTLKW---------- 332 P + +C V + W Sbjct: 67 NLPPALTWREKKPMCEGDCWCVNRFVNGRLEKATNIIECKRIEDAIEYNWGETEEITHHA 126 Query: 333 --RLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEE 390 L ++G+L P H S ++ L++ + Q+ T+ R E++++ +++ E Sbjct: 127 TIPLRAGSEKFGLLNVASPHKTHFSEEELALLEAIAFQIGTTIQRIRLVEKERKYVIVAE 186 Query: 391 RATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLT 450 R +AR+LHDS+ Q L + + A + +E+L I + ++ L+ Sbjct: 187 RNRLARDLHDSVKQLLFSIMLTARG--TLDMAKDKELQEMLRYIGELSQEALQEMTLLIW 244 Query: 451 TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNA 510 R + E GL A + Y G V + + L ++++EAL N Sbjct: 245 QLRPEGLEKGLAEA----VQNYGKLLGIQVAIRIDG-VISIGDEIEEVLWRVSQEALHNC 299 Query: 511 LKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVR 570 KH+ V V++ +N++ ++D+G G +R + G+ M++R + ++G R+R Sbjct: 300 KKHASCERVSVSLKIENNKLNFQIEDDGIGFIRETVRDSALGLKSMKERIELMKGTFRIR 359 Query: 571 RRESGGTEVVVTFI 584 + GT++ + Sbjct: 360 TKPGQGTKIEIQLP 373 >UniRef50_A7NRQ7 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NRQ7_ROSCS Length = 682 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 2/224 (0%) Query: 362 VDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD 421 ++ +L T A + +E Q ++ +EER +ARELHDS++Q+L + + Q Q + Sbjct: 458 LNRRTRELAQTSAELQLKETQVKMAALEERQRLARELHDSVSQALYGIALGARTAQTQLE 517 Query: 422 ALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPV 480 P E L I + A +++R L+ R + L GL AL + A+ V Sbjct: 518 RDPARLGEPLEYILSLAEAGLSEMRALIFELRPESLQTEGLVAALTKQSDALRARHKLDV 577 Query: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG 540 + P + L +IA+EA+ N +H+ A+ V +++ D + L ++DNG G Sbjct: 578 VTRFD-PEPEISLEAKEALYRIAQEAMHNVARHAHATRVELSLLNADGALTLEIRDNGKG 636 Query: 541 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 H G+ M +RA + G + R GT + VT Sbjct: 637 FDPAQPYPGHLGLKSMPERAAHIGGAFHIESRPGAGTVITVTVP 680 Score = 72.3 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 9/135 (6%) Query: 149 IETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNE 208 I TV +MA+F T+ + L +P +L+ A++ + ++ +E Sbjct: 384 IATVRNTLLIMALFFIGAAAVTLWLSQRFLARPMTDMLSGVRAITAGNLDVSVPVTSNDE 443 Query: 209 MAMLGTALNNMSAELAESYAVLEQRVQE--------KTAGLEHKNQILSFLWQA-NRRLH 259 + L + N M+ EL L Q E K A LE + ++ L + ++ L+ Sbjct: 444 LGELAASFNQMTDELNRRTRELAQTSAELQLKETQVKMAALEERQRLARELHDSVSQALY 503 Query: 260 SRAPLCERLSPVLNG 274 A L Sbjct: 504 GIALGARTAQTQLER 518 >UniRef50_Q2LRG0 Signal transduction histidine kinase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LRG0_SYNAS Length = 519 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 72/269 (26%), Positives = 125/269 (46%), Gaps = 10/269 (3%) Query: 328 TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQ---- 383 T R D H ++ A+ R + + E+ A L+ +E+ + Sbjct: 249 TEFPCRHKDGHEIICLMRASRIGERLTERRIVVTYEDITERKKAEKELEESREKMRNLSI 308 Query: 384 --QLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNAS 441 Q + EER IARE+HD + QSL+ KM +S L + + + + + + ++ + Sbjct: 309 HLQSVREEERTRIAREIHDELGQSLTAFKMDLSWLGKRMTS-EKLLHDKIKAMSGLVDRT 367 Query: 442 WAQLRELLTTFRLQL-TEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLL 500 + + R L + GL A+E +E+SA+ G + D + + A + Sbjct: 368 IESVHRISADLRPGLLDDLGLVAAMEWQAKEFSARSGIACEADLEAEDVPLDKEPATAVF 427 Query: 501 QIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR-SNHYGMIIMRDR 559 +I +E L+N +HS A++V V + ++V L V DNG G+ + I +G++ MR+R Sbjct: 428 RIFQETLTNVARHSNATKVFVRLETKGDKVILEVTDNGRGITQKQINDPKSFGIMGMRER 487 Query: 560 AQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 A GD +V S GT V V+ IP K+ Sbjct: 488 ALLWGGDVQVIGSRSRGTTVKVS-IPLKS 515 >UniRef50_C8NE28 Sensor histidine kinase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NE28_9LACT Length = 355 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 4/217 (1%) Query: 380 ERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELN 439 E ++ ++ +ER IARELHDS++Q L M +S L + E ++ L+ I + L+ Sbjct: 142 EETKEQVIEQERRRIARELHDSVSQQLFAAMMMISALNERKQHFDEKEQKQLAMIEHVLS 201 Query: 440 ASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIH 498 + +++R LL R L L+ +E E + +K+ + + +P H Sbjct: 202 QAQSEMRALLLHLRPISLENKSLKSGIEGLLVEL--QTKVQMKIHWDIEDVTLPEGVEDH 259 Query: 499 LLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRD 558 L +IA+E LSN L+HS A + V + Q D+ V ++D+G G + I + YG+ M++ Sbjct: 260 LFRIAQELLSNTLRHSHAKHLEVYLRQKDSNVIFKIEDDGVGFNVDDIHTGSYGINNMKE 319 Query: 559 RAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGD 595 R Q L G ++ + GT + + IP + D Sbjct: 320 RVQGLGGQVKIVSFPNQGTTIEIK-IPLGRHLEGNYD 355 >UniRef50_Q2B2D2 Two-component sensor histidine kinase n=2 Tax=Bacillus RepID=Q2B2D2_9BACI Length = 345 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 10/255 (3%) Query: 335 ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATI 394 + + + G++ L +Q V L E+ ++ + VMEER + Sbjct: 98 SYENDEIGLIAEELDGLADYIQEQVHSVQRLAEERSS------LAQSAHAAAVMEERQRL 151 Query: 395 ARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL 454 AR+LHD ++Q L + M S D E +++ L +I + ++R LL R Sbjct: 152 ARDLHDVVSQQLFALSMMSSAALKVFDRDSEKAKKQLKEISGIAAKAQGEMRALLLHLRP 211 Query: 455 -QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKH 513 QL++ L + E K + + + HL ++ +EALSN L+H Sbjct: 212 IQLSDDTLCDGIIKLIHELRGKT--TIDFQASIDEIELSKAAEEHLFRVVQEALSNILRH 269 Query: 514 SQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRE 573 + AS++ +T+ + ++ L + D+G G + R YG+ MR+R + + G +R ++ Sbjct: 270 ADASKIKLTLTEKEDYTYLFIGDDGKGFDPHIERVASYGLKTMRERCEEIGGIFNIRSKQ 329 Query: 574 SGGTEVVVTFIPEKT 588 GT + + IP K Sbjct: 330 GEGTYIEIR-IPLKG 343 >UniRef50_C1YIX9 Signal transduction histidine kinase, COG4585 n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YIX9_NOCDA Length = 412 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 109/236 (46%), Gaps = 9/236 (3%) Query: 355 SHDQQQLVDTLVEQLTATLAL-----DRHQERQQQLIVMEERATIARELHDSIAQSLSCM 409 + +Q + V +L A L + + ++ V++ER +ARE+HD++AQ L+ + Sbjct: 173 AAEQHRERRVTVARLEAALEENAGLHAQLLTQAREAGVLDERQRMAREIHDTLAQGLAGI 232 Query: 410 KMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEAS 468 Q+ Q + P ++R + S A+ R + R QL E L AL Sbjct: 233 VTQIQAAQRVWE-DPGAARPHADRALGLARESLAEARRSVQALRPGQLAESQLPEALGEL 291 Query: 469 CEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDN 528 ++ + G LD + + L ++A+EAL+N +H+ AS V VT++ +D+ Sbjct: 292 TRRWAEEHGVRPDLDVTGERVALSPAIEVVLFRVAQEALTNVARHADASRVGVTLSYSDD 351 Query: 529 QVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 V L V+D+G G+ + +G+ MR R + + G + E GT V T Sbjct: 352 VVLLDVRDDGRGI--TGHNQHGFGLSSMRQRVRGIGGALEIESGEGEGTAVSATVP 405 >UniRef50_Q0KDJ4 Signal transduction histidine kinase containing PAS/PAC sensor domain n=3 Tax=Burkholderiales RepID=Q0KDJ4_RALEH Length = 355 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 67/285 (23%), Positives = 124/285 (43%), Gaps = 12/285 (4%) Query: 310 DKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQL 369 + + C G T+K + + +Q+L+++ + Sbjct: 76 RRRYEECRHGQDGSLRWFDTIKMPIRGQDGAVVGTVGISRDITDRKRSEQELLESRAQLR 135 Query: 370 TATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP-ESSR 428 + L +E ER I+RELHD + QSL+ +++ +S ++ Q ++ R Sbjct: 136 ELSAYLQSVRE--------AERTRISRELHDELGQSLTALRLGLSFIEAQQGPDAGDACR 187 Query: 429 ELLSQIRNELNASWAQLRELLTTFRLQL-TEPGLRPALEASCEEYSAKFGFPVKLDYQLP 487 + L ++ +++ ++ + R L E GL A+E E +S + G +L Q P Sbjct: 188 KHLQMLKQIADSTVDAVQRIAADLRPPLLDELGLTAAIEWLAESFSERGGIACELALQ-P 246 Query: 488 PRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN-AI 546 + + + + +IA+EAL+NA +H +A V V ++ ++L V DNG G+ + A Sbjct: 247 VGELSAELSTAVFRIAQEALTNACRHGRADRVRVELSAAGGTLRLVVADNGRGIDASRAG 306 Query: 547 RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTD 591 G++ MR+RA L G V + GGT V T + Sbjct: 307 HRRSLGLLGMRERALMLGGKLAVTSEKGGGTRVEAQIPNAGTAGN 351 >UniRef50_C6BTX2 GAF sensor signal transduction histidine kinase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX2_DESAD Length = 689 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 111/259 (42%), Gaps = 3/259 (1%) Query: 325 DRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQ 384 + T + L + + G+L+ + G H +++++ Q L R E+ ++ Sbjct: 419 ELRTLIVVPLLEGDKKLGLLMVSNKSG-GFDHADKRIMEMFAAQAVLALRNSRMFEQSEK 477 Query: 385 LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA-LPESSRELLSQIRNELNASWA 443 L+V ER +ARELHDS+ Q+L + ++ ++ E L ++ Sbjct: 478 LVVQGERQRLARELHDSVTQALYAITFCSDAAVRSFESGKSGAAIEQLKALQGMAQQGMR 537 Query: 444 QLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQI 502 +R L+ +L GL A++A + G L + R +P L +I Sbjct: 538 DMRSLIFDLHPPELESEGLVGAIQARLNSVEIRSGLGADLFVEGDERRLPLRVEEELFRI 597 Query: 503 AREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQS 562 A EAL+N+ KHS+A V V V + + + + D+G G + + G+ +R+R + Sbjct: 598 AIEALNNSTKHSKAESVTVKVDFAEGKTVVQIIDDGQGFDIATLPTGGMGLRGIRERVER 657 Query: 563 LRGDCRVRRRESGGTEVVV 581 + + GT + V Sbjct: 658 INAHLDINSESGKGTVLTV 676 >UniRef50_UPI0001C312DE integral membrane sensor signal transduction histidine kinase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312DE Length = 468 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 5/234 (2%) Query: 352 RHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKM 411 R L+ ++L TL E + E+ + V+EER +ARE+HD++AQ L+ + + Sbjct: 188 RELAETNRRLEATLAENAALQ---AQLVEQARDAGVVEERQRMAREIHDTLAQGLTGI-V 243 Query: 412 QVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCE 470 Q PE R L S A+ R + R + L L A+ Sbjct: 244 AQIQAAEQAAERPERWRRHLRTAAQLARESLAEARRSVQAVRPEALENARLPEAVAEVAR 303 Query: 471 EYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQV 530 +S+ G V++ PR +P+ + LL+ A+EAL+N KH++A V VT++ ++ V Sbjct: 304 RWSSIQGVGVEVTTTGHPRPLPTEVEVTLLRTAQEALANVAKHARAGRVGVTLSYMEDAV 363 Query: 531 KLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 L V+D+G G A + G++ MR R + L G + GGT + + Sbjct: 364 TLDVRDDGVGFAVGAAAGDGVGLVAMRQRVEGLGGRLEIESEPGGGTAISASAP 417 >UniRef50_C5UZV3 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZV3_9PROT Length = 401 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 82/330 (24%), Positives = 143/330 (43%), Gaps = 19/330 (5%) Query: 268 LSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRG 327 L V G +L L EL+ E ++ D + Q R P G Sbjct: 73 LPYVSEGCLDLLGLSATELK----QHPERLIKYLHADDAASFHQSMQHSARHATPWNWEG 128 Query: 328 TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQL-- 385 TL D ++ L A + L + LV + + A + L +++ ++L Sbjct: 129 RTLLPP--DGEIKWVNLRAKYRKTDLLGTHWKGLVVNITQNKQAEIELVHSRQQLRELSS 186 Query: 386 ----IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNAS 441 I EER IARE+HD I L+ +KM ++ ++ + + + +E + N L+ + Sbjct: 187 HIENIKEEERTRIAREIHDEIGVLLTALKMDLAWMRQRFPSDDGALQEKSQVMANLLDTA 246 Query: 442 WAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLL 500 L+ + R L G+ A+E E++ + P K+ V Q+I L Sbjct: 247 GIAANNLVHSLRPGSLDCFGIVAAIEIEATEFTKRTATPCKIIKSSDNLDVSDEQSITLF 306 Query: 501 QIAREALSNALKHSQASEVVVTVAQN-----DNQVKLTVQDNGCGVPENAI-RSNHYGMI 554 ++ +E L+N +KH+QA V V ++Q+ D V+L V D+GCG E A + +G+ Sbjct: 307 RVFQETLNNIMKHAQARRVQVKISQSATDQIDKYVELIVSDDGCGFDEAARNKPRSFGLR 366 Query: 555 IMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 +++R + L G + R GT++ V Sbjct: 367 GIQERIRQLDGTLSITSRPGKGTKIAVRLP 396 >UniRef50_B9TKD1 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TKD1_RICCO Length = 383 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 65/269 (24%), Positives = 118/269 (43%), Gaps = 7/269 (2%) Query: 314 QLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATL 373 Q+ V+P +TL H + G + L G +++ + L + Sbjct: 120 QILLEWVMPD-QSVSTLLLHAVAEHDEEGNTIGALVIGHNITE-----LKASERHLEESR 173 Query: 374 ALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQ 433 A + ++ ER IARE+HD + Q LS +++ +S L R ++ Sbjct: 174 AQLQMLTYHREEAREGERKRIAREIHDELGQLLSVLRLGISTLDYGYGDTNPDLRNKTAK 233 Query: 434 IRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPS 493 + ++ + + L T R + E G+ ALE +E+S G +L Sbjct: 234 MGAVVDQAIDMVHTLATRLRPAVLESGIALALEWLVQEFSKSTGIDCELSVPDEDIDFDK 293 Query: 494 HQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN-AIRSNHYG 552 +A+ + +I +E+L+N L+HSQA V + + Q+ +KL++ DNG G + A + +G Sbjct: 294 ERALPVFRIVQESLTNILRHSQADHVEIELTQDQEHLKLSIHDNGQGFEVSKATKKGSFG 353 Query: 553 MIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 +I M +R L G + GTE+ + Sbjct: 354 IIGMHERILMLGGTLEISSSSEQGTEIRL 382 >UniRef50_Q3SJC2 Multi-sensor Signal Transduction Histidine Kinase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJC2_THIDA Length = 1168 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 96/218 (44%), Gaps = 2/218 (0%) Query: 368 QLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESS 427 +L + R ++ + +ER IARE+HD + Q L+ ++M+VS + M Sbjct: 942 ELRQSRESLRLLTAHREAVREDERKHIAREIHDELGQLLTALRMEVSAVGMAFGRDNPEL 1001 Query: 428 RELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLP 487 E + ++ +N + +R++ T+ R + GL A++ E+ + + Sbjct: 1002 DEKVRSMKTVINQTIQTVRQVATSLRPAALDLGLETAIDWLASEFCKRNAVECAVAIPGE 1061 Query: 488 PRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPE-NAI 546 + +A L +I +E L+N +H+ A+ V + + ++ L V DNG G A Sbjct: 1062 -IALDEVRATALFRILQETLTNIARHAGATSVSIKLKTTGEEICLKVTDNGRGFDPEEAK 1120 Query: 547 RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 + +G+ + +R L G ++ G E+ V Sbjct: 1121 QGGSFGLKGIAERVLILGGTMTIKSAPGQGAELAVCIP 1158 >UniRef50_A9B046 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B046_HERA2 Length = 546 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 77/367 (20%), Positives = 145/367 (39%), Gaps = 20/367 (5%) Query: 220 SAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLT 279 S ++ + E + T + NQ++ L+ +R L + L V+ ++ Sbjct: 187 SDDIDQLTWKYENYLVIATPVRDQANQVIGALYVRSRPLSQNQVIVALLMFVIFIASSIV 246 Query: 280 LLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHT 339 + L M + R ++ + +L Sbjct: 247 SIIANALI-----------------GMVYGWFVARNFVRRLVHLTQATDSLAAGDLSVRV 289 Query: 340 QYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELH 399 G + R QQL + E+ QL ++EER +AR+LH Sbjct: 290 NDGSIDEIGHLARRFDSMAQQLESNVKMLRQLADRNAALVEQAGQLAIVEERNRLARDLH 349 Query: 400 DSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTE 458 DS++Q L + M + + A P+ +R + Q+ + + R L+ R L + Sbjct: 350 DSVSQELFSVTMLAAAARNLLPAQPDKARSQVEQLSQMAQRALHETRGLIFALRPAALGD 409 Query: 459 PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASE 518 GL PAL EE + + G ++L+ R +P L +I +EAL+N KHS + Sbjct: 410 QGLVPALRQLTEEAARRQGLQIELNTNGE-RRIPLDHEQALYRICQEALANVTKHSGVNS 468 Query: 519 VVVTVAQNDNQVKLTVQDNGCGVPENAIRSNH-YGMIIMRDRAQSLRGDCRVRRRESGGT 577 V++ ++ L V+D G G ++ R++H G+I +++RA+++ G + GT Sbjct: 469 ASVSLEYEAHRTTLEVRDRGRGFDQDKPRNSHSLGLISIQERAKAVGGTVELTAAPGQGT 528 Query: 578 EVVVTFI 584 + + Sbjct: 529 SLRIVVP 535 Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 65/181 (35%), Gaps = 4/181 (2%) Query: 153 VLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAML 212 + V + AL+ + ++ ++ L +++ D + R N +E+ L Sbjct: 241 IASSIVSIIANALIGMVYGWFVARNFVRRLVHLTQATDSLAAGDLSVRVNDGSIDEIGHL 300 Query: 213 GTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVL 272 ++M+ +L + +L +++ ++ A L + L+ + + NR L + +S L Sbjct: 301 ARRFDSMAQQLESNVKML-RQLADRNAALVEQAGQLAIVEERNRL---ARDLHDSVSQEL 356 Query: 273 NGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKW 332 + L L ++ + + + +GD+G Sbjct: 357 FSVTMLAAAARNLLPAQPDKARSQVEQLSQMAQRALHETRGLIFALRPAALGDQGLVPAL 416 Query: 333 R 333 R Sbjct: 417 R 417 >UniRef50_B8D0J3 Histidine kinase n=2 Tax=Clostridia RepID=B8D0J3_HALOH Length = 391 Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 79/380 (20%), Positives = 172/380 (45%), Gaps = 19/380 (5%) Query: 232 QRVQEKTAG-LEHKNQILSFLWQANRRLHSR-----APLCERLSPVLNGLQNLTLLRDI- 284 +++ EKT L + + + ++ RR + + E ++ V+ + L + I Sbjct: 12 EKILEKTVEVLAESKKEIFTIAESIRREYDNIKRELDLINEEINEVVAKVDKLQEVNRIA 71 Query: 285 ELRVYD-TDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGI 343 +R+ + + D E H E+ D+ + + + + ++ LK R A+ + Sbjct: 72 RIRLMEVSRDFEKHSEY----DIKYAYQQAEDTSVQIAVLREKEEQLKKRRAELENRLIN 127 Query: 344 LLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIV------MEERATIARE 397 L + + ++ + D L+ +L+ ++QQL + +ER +ARE Sbjct: 128 LKRNIEKAENMVSRVGVVHDYLLGELSNLSEQFDDLRQKQQLAIKIIQAQEDERKRVARE 187 Query: 398 LHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QL 456 +HD AQS++ + +V Q D + +R L ++ + S ++R+++ R L Sbjct: 188 IHDGPAQSIANLVFRVELAQKLMDKDLKKARNELEDVKELVRLSMQEVRKIIYDLRPMSL 247 Query: 457 TEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQA 516 + GL P L +++ + + + P R +P+ I + ++ +E L+N KHS+A Sbjct: 248 DDLGLIPTLRRYINKFNEQTKIIIDFNILGPKRRLPNTYEITIFRLIQEGLNNIYKHSKA 307 Query: 517 SEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGG 576 S VT+ Q+ + + D+G G + +N +G++ MR+R + L G + ++ G Sbjct: 308 STGTVTLEYTPEQINILISDDGIGFKPEEVGANKFGLVSMRERCELLGGKLDLFSEKNKG 367 Query: 577 TEVVVTFIPEKTFTDVQGDT 596 T++ +T ++ + D Sbjct: 368 TKIKITLPIKQRGGKDEADK 387 >UniRef50_B8FFK0 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FFK0_DESAA Length = 832 Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats. Identities = 74/408 (18%), Positives = 147/408 (36%), Gaps = 33/408 (8%) Query: 185 LLAMASAVSHRDFTQRANISGR-NEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEH 243 L A+ +F + +S E ALN +L++ LE++V +T + Sbjct: 440 LSAIGERDEEGNFVRSLAVSVDVTEQKKAQEALNQAQEKLSQHSQELERQVFRRTEEISS 499 Query: 244 KNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQ 303 + L R V + + + + ++R + + Sbjct: 500 ILKYTPNLVHI-------KDADGRYIMVNRRYEEIFGISNEDVRGRTQHESMPREYADAF 552 Query: 304 PDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVD 363 ++ PV + L P +D+Q + Sbjct: 553 REV------DHRVLSEKKPVRSEYVV-----RVDGEDHSYLSVKFPI-----YDEQGRIH 596 Query: 364 TLVEQLTATLALDRHQERQQQL------IVMEERATIARELHDSIAQSLSCMKMQVSCLQ 417 + T + + QE ++L ER IARELHD + Q L+ ++M + Sbjct: 597 AIGGISTDVTEIKKAQEALRRLSNRMIISQEAERQAIARELHDELGQILTVLRMDAVWFK 656 Query: 418 MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKF 476 + +++E S + ++ + +R + R L + GL ALE ++ + Sbjct: 657 KRLKDSDAATQERASAMCELIDKTIEDVRGIAVRLRPGVLDDLGLVDALEWYTSDFERRT 716 Query: 477 GFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQD 536 G ++ P + + + +IA+EAL+N ++H+ V+++ + + L + D Sbjct: 717 GITCIFEHDNIPN-LGNAISTAAYRIAQEALTNVVRHASTDRADVSLSFDQEEFTLIISD 775 Query: 537 NGCGVPENAI-RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 NG G + S G+ MR+RA G V E G+ ++ Sbjct: 776 NGVGYDGGMVEESEGLGIAGMRERAMLAGGTLEVEAGEDAGSRIIFRI 823 >UniRef50_C9NJB7 GAF sensor signal transduction histidine kinase n=7 Tax=Streptomyces RepID=C9NJB7_9ACTO Length = 381 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 10/269 (3%) Query: 325 DRGTTLKWRLADSHTQYGILLATLPQ------GRHLSHDQQQLVDTLVEQLTATLALDRH 378 D L + D G L + G + + ++L++ L + L R Sbjct: 112 DMSDFLGLPIQDGDETIGALFLANKRCPRPTGGCGFTEEDEELLEILAQHAAIALTNARL 171 Query: 379 QERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNEL 438 ER ++L + EER+ +A ELHD+++Q L +++ D P ++ L Q+ Sbjct: 172 YERSRELTIAEERSRLAHELHDAVSQKLFSLRLTAQAAAALVDRDPVRAKGELQQVATLA 231 Query: 439 NASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAI 497 + +LR + R L E GL L + V R +P+ Q Sbjct: 232 GEAVDELRAAVVELRPAALDEDGLVATLRTQVQVLDRAHSARVTFTSAG-VRALPAAQEE 290 Query: 498 HLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR--SNHYGMII 555 +L++A+EAL NAL+HS A +V V++A++ L + D+GCG + +R H G++ Sbjct: 291 AMLRVAQEALHNALRHSGAGQVDVSLARSTTTAVLRITDDGCGFDPDVVRRAGRHLGLVS 350 Query: 556 MRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 MR RA + G V GT + + Sbjct: 351 MRHRAGGVGGRLVVDSEPGTGTTIQMEVP 379 >UniRef50_Q5HN87 Sensor histidine kinase n=64 Tax=Staphylococcaceae RepID=Q5HN87_STAEQ Length = 377 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 122/257 (47%), Gaps = 9/257 (3%) Query: 332 WRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEER 391 L ++ +L P H S + +L++++ Q+ + + + ++++ + ER Sbjct: 122 VPLQSGSERFSLLNVASPNKEHYSEEDLELLESVAFQIGSAIKRIQLTNKEKENAKINER 181 Query: 392 ATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTT 451 +AR+LHDS+ Q L +K+ + G E ++ I + ++R L+ Sbjct: 182 NRLARDLHDSVNQMLFSLKLTAHAAK--GITTDEQAQRAFKTIEETSQNAVNEMRALIWQ 239 Query: 452 FRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNAL 511 + E GL AL YS G +K+ + + ++ +I +EA++N + Sbjct: 240 LKPVGLEQGLIHALHY----YSKMLGLDLKVTING-LIDLSNDIEENVYRIIQEAMNNVI 294 Query: 512 KHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHY-GMIIMRDRAQSLRGDCRVR 570 KH++ ++V + ++QN + +++ ++DNG G +I + + G+ ++ R Q L G + Sbjct: 295 KHAKTNKVYLDLSQNVDYLEVDIRDNGQGFDTQSINTFLFNGLKNIKQRTQYLNGKVTIE 354 Query: 571 RRESGGTEVVVTFIPEK 587 + + GT + + IP K Sbjct: 355 SKINQGTRIYIK-IPLK 370 >UniRef50_Q1D524 Sensor histidine kinase n=2 Tax=Cystobacterineae RepID=Q1D524_MYXXD Length = 427 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 5/218 (2%) Query: 367 EQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPES 426 + A + Q ++L V+EER +ARE+HD + SLS M +Q + A E Sbjct: 211 REAAAHREVVSLQGDLKELAVVEERNRMAREIHDGLGASLSSMIIQSEYILNL--AREEG 268 Query: 427 SRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQL 486 RE + +++ S +LR L R + L LE + + + G ++ + Sbjct: 269 LREEIRELKLTAEESIEELRRSLRMMR---EDFELAQGLEDYAKTFRERTGLDIRFERTG 325 Query: 487 PPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI 546 R + + L +I +E+LSNA+KH++A V V + ++++V L V+D+G G + Sbjct: 326 LQRKLDPDVQLALFRILQESLSNAVKHAEAKGVQVRLDFSEDRVNLVVRDDGKGFDPSRT 385 Query: 547 RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 HYG++ MR+RA L G V G +V + Sbjct: 386 PRGHYGLLNMRERAMKLGGQLIVDSSPGAGAQVAFSLP 423 >UniRef50_C5V7S2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7S2_9PROT Length = 647 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 1/221 (0%) Query: 365 LVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP 424 + E+L + + R + I +E IARE+HD + Q+L+ ++M VS +++ Sbjct: 425 IEEKLLHSQQMLRELSAHLENIREDEHRHIAREIHDELGQALTALRMDVSLVRLNFGEAN 484 Query: 425 ESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDY 484 L + + + +R + ++ R + G+ ALE EE++ +L Sbjct: 485 PQLLTHLQSMSQRVQRTVDIVRHITSSLRPGALDMGIVAALEWLAEEFTGYTQIQCELAL 544 Query: 485 QLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN 544 + A + +I +E+L+N +H+QA++V V V ++++++ V DNG G Sbjct: 545 NDGNIALDEFSATAVFRIVQESLTNIARHAQATQVEVIVTRSEDELCFEVCDNGTGFDPG 604 Query: 545 AIRS-NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 AI + +G+I +R+R L G + R+ GT + V Sbjct: 605 AIENCKSFGLIGIRERVAMLSGHFEIESRQGAGTCLRVHIP 645 >UniRef50_B4CYV7 Histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYV7_9BACT Length = 694 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 89/357 (24%), Positives = 155/357 (43%), Gaps = 29/357 (8%) Query: 240 GLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQE 299 + H N+ + L R + R L + +R + V + +E + + Sbjct: 361 RVRHLNEEILVLTSGGRIFDAVLDNPTR-PDALADFLPGSKVRANGVCVVEVGEERSPRA 419 Query: 300 FTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQ 359 F D Q P LP L W L G+ LATL Sbjct: 420 FRMLIRSPQDIALLQRPPWWTLP------RLLWSLG------GVSLATLAGWIW------ 461 Query: 360 QLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ 419 V L ++ + R ++ Q+ +EERA +ARE HD++ Q + +++Q+ ++ + Sbjct: 462 --VAALGRRVRRQTEVIR--QKIQREGALEERARLAREFHDTLEQQFTGIRLQLEAVKSK 517 Query: 420 GDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGF 478 P + E L R+ + S + R + R L + L ALE + + Sbjct: 518 FGEAPAEAEEYLDVARSLMRHSHDEARRTVWDLRADVLEQHDLSTALEKTVAGATNGTP- 576 Query: 479 PVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNG 538 ++ PR +P HLL+I +EA++NA+KH++ASEV + + + ++L V+D+G Sbjct: 577 RARVAVSGQPRRLPGWMENHLLRIGQEAVTNAIKHARASEVHIELDYRPDVLQLRVRDDG 636 Query: 539 CGVPEN---AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDV 592 CG N A H+G++ M++RA+ +RG +V + GT + VT +P T Sbjct: 637 CGFDANDTSASDRGHFGLLGMKERAEKIRGRLQVLSTLAAGTMIEVT-VPLDTLDAE 692 >UniRef50_B4D6U9 Multi-sensor signal transduction histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6U9_9BACT Length = 638 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 76/360 (21%), Positives = 145/360 (40%), Gaps = 15/360 (4%) Query: 238 TAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENH 297 T + + + + ++S + LNG+ + Y ++ Sbjct: 274 THDITARKRAEEAQVRLAAIVNSS--DDAIIGKTLNGIITTWNPGAERMFGYCAEEIVGK 331 Query: 298 QEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHD 357 T P ++ L G T++ R S ++ + Sbjct: 332 SMLTLIPPDRVHEEKEILSRIGAAESVVHFETVRIRKDGSCVDISATISPINDSAGKIVG 391 Query: 358 QQQLVDTLVEQLTATLALDRHQERQQQL------IVMEERATIARELHDSIAQSLSCMKM 411 Q+ + EQ A L + ++L EER I+RE+HD +AQ L+ +KM Sbjct: 392 ASQIARDITEQKRALEQLRNSHAQLRELTGRLHAAREEERGRISREIHDVLAQQLTRLKM 451 Query: 412 QVSCL-QMQGDALPESSRELLSQ----IRNELNASWAQLRELLTTFRLQ-LTEPGLRPAL 465 +S + + ++ E++R+ L + +++S ++ + T R L GL A+ Sbjct: 452 DLSWIDKRLAQSVDETTRQALGEKVRSATELVDSSIGAVQHIATELRPVVLDALGLAAAV 511 Query: 466 EASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ 525 E ++ G ++D +P A L +I +E L+N ++H+ A+ V V++ Sbjct: 512 EWQVTQFQEHTGVQCQVDIDGEEPRLPHDHATGLFRILQETLTNVMRHAGATLVEVSLRM 571 Query: 526 NDNQVKLTVQDNGCGVPENAIRSNH-YGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 + + L+V+DNG G+ + + H G++ MR+RA G + GT VVVT Sbjct: 572 EPDILTLSVRDNGRGITAGELSNMHSIGLLGMRERALLFGGKVTIHGIPEKGTTVVVTMP 631 >UniRef50_Q0AF09 Multi-sensor signal transduction histidine kinase n=3 Tax=Nitrosomonas RepID=Q0AF09_NITEC Length = 498 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 114/242 (47%), Gaps = 7/242 (2%) Query: 349 PQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQ----QLIVMEERATIARELHDSIAQ 404 P+G L D L T +Q+ +A R Q + Q +ER IARE+HD I Sbjct: 244 PRGAVL-WDGIMLNITRNKQIELEIARSRAQLEELSAYSQKAKEQERTRIAREIHDDIGG 302 Query: 405 SLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPA 464 +L+ +K ++ PE R + + + ++ R + R + + G+ A Sbjct: 303 TLTAIKCELVPCLDNSSRAPEFYRNKAAAVESLVDMVIDSTRRIALDLRPGVLDCGIVAA 362 Query: 465 LEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVA 524 ++ E++ + G + + A+ + ++ +EAL+N KH+ ASEV V ++ Sbjct: 363 VQWQAREFNQRTGIACAVVCDDEEISLDGDLAVAIFRVFQEALTNIAKHADASEVRVKLS 422 Query: 525 QNDNQVKLTVQDNGCGVP-ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + +V L V DNGCG+ + + N +G+ MR+R Q L G ++ GT V++ + Sbjct: 423 EASGEVYLEVADNGCGITYPDMEKVNSFGIRSMRERCQQLGGRFHIQGEPQTGTGVMI-W 481 Query: 584 IP 585 IP Sbjct: 482 IP 483 >UniRef50_Q0B944 Multi-sensor signal transduction histidine kinase n=29 Tax=Burkholderiaceae RepID=Q0B944_BURCM Length = 707 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 64/238 (26%), Positives = 113/238 (47%), Gaps = 14/238 (5%) Query: 361 LVDTLVEQLTATLALDRHQERQQQL------IVMEERATIARELHDSIAQSLSCMKMQVS 414 ++ + E+ A AL + +E ++L + EE+ IARELHD + Q L+ +KM +S Sbjct: 459 MLRDITERQRAENALKQSREELRELSANLQNVREEEKTRIARELHDDLGQQLTALKMDLS 518 Query: 415 CLQMQGDALP-----ESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEAS 468 ++ Q A + L +R ++A+ A +R + R L + GL PA+E Sbjct: 519 VIEQQLRAPGRAQPNDDVLSHLQGMRRLIDATVASVRRIAADLRPVMLDDLGLVPAIEWL 578 Query: 469 CEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDN 528 +++ ++G V+ + S A L +I +EAL+N +H+ A+ V + + + Sbjct: 579 ANDFTNRYGIDVERHIETGGLTFTSAGATTLFRIVQEALTNVARHADATRVALRLDIEEG 638 Query: 529 QVKLTVQDNGCGVPEN--AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 L V DNG G A +G+I +R+RA L G+ + + G + V F Sbjct: 639 FCVLRVADNGRGAAPGGSAHEDKSFGLIGIRERAHMLGGNVTIDTALARGFSITVAFP 696 >UniRef50_C6XAR1 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAR1_METSD Length = 465 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 60/255 (23%), Positives = 124/255 (48%), Gaps = 12/255 (4%) Query: 331 KWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEE 390 +L + Q+G ++ + Q ++ + ++ + E L H + ++ +E Sbjct: 218 PIKLHNGEVQWGGIITNITQSKNEKLEIERSRQRMAE-------LSAHLTQVKE----QE 266 Query: 391 RATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLT 450 R IARE+HD + +L+ +K+ ++ + + + E + + ++ ++ + + + Sbjct: 267 RRRIAREIHDDLGGNLTAIKIGLTSIIKRINPDEPKLVEKALNLESIVDRTFDIVHRIAS 326 Query: 451 TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNA 510 R + E G+ ALE C ++ +F P + V + +AI L +I +EA+SN Sbjct: 327 DLRPDVLELGIVAALEWQCGQFEKQFSLPCRFYSSQTELAVSADEAITLFRICQEAMSNI 386 Query: 511 LKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP-ENAIRSNHYGMIIMRDRAQSLRGDCRV 569 KH++A +V V + D + L + D+G G+ ++ ++N +G+ MR+R +L G V Sbjct: 387 AKHARARQVEVELLVEDRDIMLRIVDDGQGIRMQDQHKANSFGLRGMRERVAALDGSLEV 446 Query: 570 RRRESGGTEVVVTFI 584 +R GGT V V Sbjct: 447 EKRVRGGTAVQVKIP 461 >UniRef50_C6NZS6 Multi-sensor signal transduction histidine kinase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZS6_9PROT Length = 902 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 58/285 (20%), Positives = 122/285 (42%), Gaps = 28/285 (9%) Query: 328 TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQ---- 383 +++ L + G L S + L++ L + L+ + R + Q Sbjct: 612 SSIGIPLVINGKAIGALTINSADPFTFSKGEVVLLEDLADNLSYGIQTLRTRNEHQSALT 671 Query: 384 -----QLIVMEERAT------------------IARELHDSIAQSLSCMKMQVSCLQMQG 420 +L + + IAR+LHD + Q L+ ++M +S ++MQ Sbjct: 672 FLQKSELSLEQSNQQLRDLTIRREEAREDERKRIARDLHDELGQILTVLRMDLSVMRMQF 731 Query: 421 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV 480 A + + + I + ++++ +R++ + R E G+ ALE E++ + Sbjct: 732 GASNPALLDQIKNILSRVDSTIQVVRDVASKLRPGALEAGIVAALEWQVAEFAKRSDIHF 791 Query: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG 540 L + +A + +I +E+L+N +H+ A+ V V++++ + L + D+G G Sbjct: 792 DLKIDESNIDLDDERATAIFRIVQESLTNVTRHAAAANVCVSLSRLQDNYILEIIDDGRG 851 Query: 541 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 + +G++ +R+R+ L G +R GT V V +IP Sbjct: 852 FDTEMLSGRTFGLMGVRERSMMLEGTVDIRSSPGKGTHVTV-YIP 895 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 9/96 (9%) Query: 144 TTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANI 203 +++R V + + ++ M + + R+ P QL A+ A+S RA + Sbjct: 272 YSQLRKMLVRNI--LFSLAMLSFVFGVAWLIARRISNPISQLTAVTRAISQGSRVARAEL 329 Query: 204 SGRNEMAMLGTALNNM-------SAELAESYAVLEQ 232 G E+ + N M A L ES L + Sbjct: 330 VGPPEIREVAQEFNEMLKIRWHTEAALRESEINLSE 365 >UniRef50_C0ZJS5 Two-component sensor histidine kinase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZJS5_BREBN Length = 365 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 69/355 (19%), Positives = 143/355 (40%), Gaps = 19/355 (5%) Query: 257 RLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLC 316 + + + + + + + + L+ D E R+ + + ++ D C+LC Sbjct: 8 AMGTSSEVLSLMQSIFANVSDAILVIDQEGRIVKANAALEQMTGWTEEELIRDKHICELC 67 Query: 317 PRGVLPVGDRGTTLKWRLADSHTQYGILL---------ATLPQGRHLSHDQQQLVDTLVE 367 + + + + + L R Q +LV L + Sbjct: 68 LGMATCMEETSCADCFFKRVQMPSFEMRLRTKSGVDYPVAASSARLEDESQGKLVMILRD 127 Query: 368 Q-LTATLALDRHQERQQQLIV---MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDAL 423 + +R+Q + + EER IARELHD + Q+L + + ++ ++ + L Sbjct: 128 MSAQQRVEKERYQYKLTNFAIQAQEEERKRIARELHDGVGQALYSILVGLNVVRQR--EL 185 Query: 424 PESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKL 482 E + ++++ N + + +++ + R L + GL PAL + + F V+L Sbjct: 186 SEPVMQHVAELVNMTSKAMEEVKRMALELRPSALDDLGLLPALRSLMKRVEKTFHIQVEL 245 Query: 483 DYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP 542 Q R + L +I +EA++N K+++AS + + + ++ +T+ D+G G Sbjct: 246 HVQGEKRRYSAAMETALYRIVQEAMTNTAKYAKASHLGIMFENREKEIVVTIVDDGVGFE 305 Query: 543 ENAIR--SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI-PEKTFTDVQG 594 G+ M++RAQ L G +R GT V+V P++ D Sbjct: 306 VEKTLKIGKGLGVFGMKERAQLLGGTVDIRSAPEEGTTVIVRIPVPKEGVEDEHS 360 >UniRef50_B9XSJ3 Multi-sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XSJ3_9BACT Length = 795 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 65/224 (29%), Positives = 110/224 (49%), Gaps = 7/224 (3%) Query: 368 QLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ--GDALPE 425 +LT + R Q I EER I RE+HD + QSL+ KM ++ ++ + G+ Sbjct: 545 ELTKSREELRALAAHLQFIREEERKHITREIHDELGQSLTGFKMDLAWMRARLLGEDSKA 604 Query: 426 SSRELLSQIRNELN---ASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVK 481 S ++L+ +I N + +R L T R L + GL A+E EY + G Sbjct: 605 SRQQLIDKIENMARLIDETANVVRRLCTELRPGVLDDLGLTAAIEWQIREYQNRTGIRCS 664 Query: 482 LDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV 541 + + V + ++ L +I +E ++N +H+QAS V V++ + +++ L V+DNG G+ Sbjct: 665 TEIESGDLGVDAERSTALFRIFQELMTNTARHAQASRVEVSLKRIGSEIVLEVRDNGRGI 724 Query: 542 PENAIRSN-HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 EN G++ MR+RA L G+ + + GT V V Sbjct: 725 KENEKAGTKSLGLVGMRERALVLGGELEIAGKPGRGTMVRVRVP 768 >UniRef50_Q8YV44 Two-component sensor histidine kinase n=3 Tax=Cyanobacteria RepID=Q8YV44_ANASP Length = 944 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 3/209 (1%) Query: 378 HQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNE 437 Q+R + ++EER +ARE+HD++AQ+ + + QV + E++ L I+ Sbjct: 733 LQKRAEAASILEERNRMAREIHDTLAQAFTGILAQVGAAKQVLTDDLEATESHLDLIKEL 792 Query: 438 LNASWAQLRELLTTFRLQLTEPG-LRPALEASCEEYS-AKFGFPVKLDYQLPPRLVPSHQ 495 + R + R QL E G L+ AL + A + + + +P+ Sbjct: 793 ARTGLVEARRSVVALRPQLLEEGSLQSALHRLVAQLRTAAIDTTLYYEIEGAVYSLPTEI 852 Query: 496 AIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR-SNHYGMI 554 +LL++ +EAL+NA++H+ A E+ V + + ++ L V+DNG G +I S +G++ Sbjct: 853 ESNLLRMGQEALTNAIRHANADEIRVELVYDRDRFCLRVRDNGQGFGVGSIPASEGFGLL 912 Query: 555 IMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 M +RA+ + +R + GTE+VVT Sbjct: 913 GMSERAERIGAQLTIRSQPGQGTEIVVTV 941 >UniRef50_D2BHE9 Sensor histidine kinase n=5 Tax=Dehalococcoides RepID=D2BHE9_DEHSV Length = 381 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 12/254 (4%) Query: 352 RHLSHDQQQLVDTLVEQLTATLALDRHQE------RQQQLIVMEERATIARELHDSIAQS 405 D++ ++ TA L R Q+ +Q + +ER IA+ELHD AQ Sbjct: 127 ESYETDKKHRQQAYLKMETAQRELQRMQQNLRFYLKQITIAQEDERRRIAQELHDDTAQD 186 Query: 406 LSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPA 464 L + + Q L E + L +++N +N + +++R R L + GL PA Sbjct: 187 LIVISRAIDRFVTQNPNLGEDNLAELEELQNHVNRTLSEVRRFAQDLRPSVLDDLGLIPA 246 Query: 465 LEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVA 524 LE + S FG + +D R + L +I +E+L N KH+QA++ V + Sbjct: 247 LEWLIPDLSKHFGINIDIDVNGEIRRFAPETELVLFRIVQESLRNVGKHAQATKAWVYID 306 Query: 525 QNDNQVKLTVQDNGCGVPENAIRS-----NHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 + LT++DNG G G+ M++RAQ + G ++ + GT V Sbjct: 307 FGKYKATLTIKDNGRGFLLPERVGDLAALGKLGLTGMQERAQLIGGRLSIQSKPEVGTMV 366 Query: 580 VVTFIPEKTFTDVQ 593 V D + Sbjct: 367 TVAVPNSGNLEDNE 380 >UniRef50_A7NG30 Multi-sensor signal transduction histidine kinase n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NG30_ROSCS Length = 591 Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats. Identities = 69/371 (18%), Positives = 130/371 (35%), Gaps = 37/371 (9%) Query: 250 FLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCD 309 L++A L + L L+ Q L + + + + D Sbjct: 220 ALYEAAYTLATTNDYQNVLEVTLDESQKLAPYTCGMVLLSTGQTNQLFVASSRGLDPNDQ 279 Query: 310 DKGCQLCPRGV------------------------LPVGDRGTTLKWRLADSHTQYGILL 345 ++ + P + + T L YG+++ Sbjct: 280 ERIVTIGPGAIGRTIRGSDPVVLDNFRDDPELMAFTSLHRHRTACLLPLRFGLNTYGVMV 339 Query: 346 ATLPQGRHLSHDQQQLVDTLVEQLTATLALDR-----HQERQQQLIVMEE-RATIARELH 399 R H++ + + L L + QER + L EE R +AR+LH Sbjct: 340 FASDHERAFGHEEVEKLAALASYALVALQNAQLIYDLQQERTKLLSKEEEVRHQLARDLH 399 Query: 400 DSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTE 458 D AQ+L+ + M V ++ + P L ++ + +R +L R L Sbjct: 400 DGPAQALAAITMNVEFIKRLLERDPARVLPELDKLGQLAKRTTHDVRTMLFELRPLALET 459 Query: 459 PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASE 518 GL L+ E + + L+ + + L I +EA++NALKH++A Sbjct: 460 QGLDVTLQQYFERFRDN-PTKIILEADTIDAQLDTKVEGTLFNIVQEAVNNALKHAKAQH 518 Query: 519 VVVTVAQNDNQVKLTVQDNGCGVPENAIRS-----NHYGMIIMRDRAQSLRGDCRVRRRE 573 + V + Q ++ ++D+G G +R+ +G++ + +RA + G V Sbjct: 519 IWVRLRQTPTTLETIIEDDGRGFDVEKVRASYDQRGSFGLLNIEERASLMGGVAEVTSTP 578 Query: 574 SGGTEVVVTFI 584 GT V Sbjct: 579 GKGTTWKVIVP 589 >UniRef50_UPI00017449FC GAF domain protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017449FC Length = 690 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 112/267 (41%), Gaps = 12/267 (4%) Query: 332 WRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEER 391 W L + G+L A + +Q V + + + V +ER Sbjct: 431 WTLRRTLWALGLLGAASLVFLGWAALLRQRVTEQTRIIGTQIE---------RSAVKDER 481 Query: 392 ATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTT 451 IARELHD+I Q L+ + +Q+ + + PE + L L + R + Sbjct: 482 ERIARELHDTIEQELAGLSIQLRNARQRIATAPEQASRSLGLAEQMLRHCREEARTSIRD 541 Query: 452 FRLQLTEP-GLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNA 510 R E GL ALE + + G L+ + P + IHLL+IA EA++NA Sbjct: 542 LRSTALELRGLHGALEEMLTPLATEAGAHFSLEVKGEPYHLAGPSEIHLLRIAHEAVANA 601 Query: 511 LKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI-RSNHYGMIIMRDRAQSLRGDCRV 569 +H+ + VT+ V L ++D+GCG +A H+GM+ +R+R L+G + Sbjct: 602 ARHASPRLIQVTIEFTPETVSLEIEDDGCGFDTDAPAPRGHFGMLGIRERVNKLQGTLQT 661 Query: 570 RRRESGGTEVVVTFIPEKTFTDVQGDT 596 GT + V +P + G T Sbjct: 662 HSEPGKGTRIHV-VVPSEVAKRSNGST 687 >UniRef50_C1XJE4 Histidine kinase n=2 Tax=Meiothermus RepID=C1XJE4_MEIRU Length = 529 Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats. Identities = 77/370 (20%), Positives = 144/370 (38%), Gaps = 9/370 (2%) Query: 220 SAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLT 279 S E VL V +++ L L++ ++ L + A L L +++ + Sbjct: 163 SNEERAFLEVLAAEVAGALESARARSRDLLTLYEVDQALRAEANLGRLLERLMDRILAWA 222 Query: 280 LLRDIELRVYDTDDEENHQEF-TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSH 338 + + D ++ Q + + PV R L L + Sbjct: 223 GATGGGVLLLDEENFLQPQVLRNLELPPHAFMPDHRWKEALESPVFVRENLLAVPLREQS 282 Query: 339 TQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIAREL 398 +L+ + + + L Q+T + + R ++L + EER IARE+ Sbjct: 283 AIGLLLVQGEAENLR---QRLPFLRFLAAQVTLAVRNAQAYLRAEELALTEERNRIAREI 339 Query: 399 HDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLT 457 HD IAQ+L+ M +++ + PE + E L Q++ L A ++R + R L Sbjct: 340 HDGIAQALAFMALKLDLSERLLQTDPERALEELHQVKETLRAQIREVRRSIFALRPIDLE 399 Query: 458 EPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQAS 517 G ++ ++ + GF V+L + + ++ +EAL+NA KH++ Sbjct: 400 RYGFLESVRRYATAFAEQAGFRVRLSLP-EKIELSQASELVFFRVLQEALTNAAKHARPG 458 Query: 518 EVVVTVA-QNDNQVKLTVQDNGCGVPENAIRS--NHYGMIIMRDRAQSLRGDCRVRRRES 574 V V + + L + DNG G + +G+ MR+R ++ G V E+ Sbjct: 459 LVQVKLTPLGERGGVLEISDNGRGFKAGTSANGLGGFGLTQMRERVEARGGRFEVVSVEN 518 Query: 575 GGTEVVVTFI 584 GT V Sbjct: 519 QGTTVRAELP 528 >UniRef50_B4UAL2 Integral membrane sensor signal transduction histidine kinase n=4 Tax=Anaeromyxobacter RepID=B4UAL2_ANASK Length = 662 Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats. Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 9/245 (3%) Query: 356 HDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSC 415 ++ ++ QL A R+ +ER IARELHD +QSL+ + M + Sbjct: 408 EERTHALNEAYAQLAAREEARAQLLRKLISAQEDERKRIARELHDETSQSLAVLAMGLEA 467 Query: 416 LQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSA 474 Q DA+ L +++ + + ++ R L + GL A+ E Sbjct: 468 AQ---DAMRGGKAPRLEEVKAVAVRTLEDVHRIILDLRPSVLDDLGLLSAIRWYAERQLG 524 Query: 475 KFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTV 534 G V+ ++ R +P L +I +EA+SN +H+QA+ V+V VA D+ ++ + Sbjct: 525 TRGMSVRCEFGELDRRLPPEMETALFRICQEAMSNIARHAQATAVLVEVALEDDVFRIDI 584 Query: 535 QDNGCGVPENAI----RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFT 590 +D+G G A+ +G++ +R+RA+ L G V GT V V IP T Sbjct: 585 EDDGRGFDAEAVARREGRRSWGLMGIRERAEILGGSATVESAPGKGTRVEVR-IPVPRAT 643 Query: 591 DVQGD 595 G Sbjct: 644 TEPGP 648 Score = 43.4 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 7/113 (6%) Query: 153 VLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAML 212 + + + +P L A ++ + G +E+ L Sbjct: 319 WWLVAAGLAAHLGIAAAFAWGAARSVTRPIGVLTGEAERIAGGELDWSIPDLGTDEVGRL 378 Query: 213 GTA-------LNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRL 258 G + L + ++A A LEQRV+E+T L L+ +A +L Sbjct: 379 GRSLDRMRLALRRLLDDVARVNAELEQRVEERTHALNEAYAQLAAREEARAQL 431 >UniRef50_C6J7D3 ATP-binding region ATPase domain-containing protein n=2 Tax=Bacillales RepID=C6J7D3_9BACL Length = 356 Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats. Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 12/232 (5%) Query: 356 HDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSC 415 + QL+ L EQ +E+ + V+EER +AR+LHD+++Q L + M S Sbjct: 114 EKKMQLLQQLGEQEVV------EKEQAAEKAVLEERRRLARDLHDTVSQQLFAIHMAASS 167 Query: 416 LQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSA 474 L + + +L+Q+ N + Q+R L+ R +L L AL+ +Y Sbjct: 168 LPKVLENNATQAETVLNQLIQMSNTAQKQMRALIAQLRPMELVGKSLAEALDQWFPDYCR 227 Query: 475 KFGFPV--KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKL 532 + G +D Q + + L I +EA++N +KH+ AS V +++ + QV L Sbjct: 228 QNGLKGIKDMDIQGD---MSEAKEHQLFLIIQEAMANIVKHAGASMVSLSLREGPRQVVL 284 Query: 533 TVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 ++ D+G G + YG+ M++RA+ L G+ + + GT + V Sbjct: 285 SISDDGQGFSSTYQKQGSYGLTTMKERAEKLGGNAEIISKPGAGTTIRVHIP 336 Score = 43.0 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 41/124 (33%), Gaps = 10/124 (8%) Query: 160 AVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNM 219 +A+L + R+ L V+ + + R + + NNM Sbjct: 50 MAGIAVLALIIGYIAGRRIQGKIDHLHLNMLQVAKGNLSVRMPETADQTFNGVYQEFNNM 109 Query: 220 SAELAESYAVL----EQRVQEKTAG-----LEHKNQILSFLWQ-ANRRLHSRAPLCERLS 269 + + +L EQ V EK LE + ++ L +++L + L Sbjct: 110 IDAMEKKMQLLQQLGEQEVVEKEQAAEKAVLEERRRLARDLHDTVSQQLFAIHMAASSLP 169 Query: 270 PVLN 273 VL Sbjct: 170 KVLE 173 >UniRef50_B9XSI9 Multi-sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XSI9_9BACT Length = 656 Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats. Identities = 82/416 (19%), Positives = 166/416 (39%), Gaps = 28/416 (6%) Query: 182 WRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGL 241 L +A+ ++ + +R RN+ L + + ++ +E+ + Sbjct: 253 LEHLQIVANNIATSIYNERLYKKVRNQKDELAEQITE-----RKRTEEALRQSEERFRII 307 Query: 242 EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ-EF 300 ++ + ++ Q R ++ E ++G+ +L+ + D+ + EN + Sbjct: 308 SEQSLMGIYIIQGERFKYANPKFAEMFGYDVSGMLSLSSVFDVIVEKERPIVSENVRLRL 367 Query: 301 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ 360 Q + Q G+L + G + ++L T D+ + Sbjct: 368 EGQIEGIRYRFHGQRKDAGLLTIEAHGFKAELNGEP------VILGTAQDVTEREMDEAE 421 Query: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 L T + T + L QE ER IARELHD I Q L+ +K+ + +Q Sbjct: 422 LKRTTEQLQTLSRRLLELQE--------SERRHIARELHDEIGQGLTALKINLQAVQRMA 473 Query: 421 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFP 479 ++ S LL I ++ + Q+R L R L + GL AL ++ + + G Sbjct: 474 NST-AFSPRLLDSI-GIVDKTLRQVRNLSLDLRPSMLDDLGLFAALRWYADQQAQRAGLR 531 Query: 480 VKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGC 539 ++ + ++A+EAL+N ++H++A V + + + ++LT++D+G Sbjct: 532 IQFAAEPMEMRQDPALETACFRVAQEALTNIVRHAEAQNVTIDLNVAEKDLQLTIRDDGI 591 Query: 540 GVPENAIR-----SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFT 590 G +R + G++ M +RA + G + GTEV F K+ + Sbjct: 592 GFDMKKVREHVAAGSSLGLLGMEERASLMGGRVEFKSTPGEGTEVYAWFPISKSLS 647 >UniRef50_B3U4S0 Response regulator receiver n=1 Tax=Candidatus Nitrospira defluvii RepID=B3U4S0_9BACT Length = 998 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 77/326 (23%), Positives = 136/326 (41%), Gaps = 16/326 (4%) Query: 266 ERLSPVLNGLQNLTLLRDIELRVYDT-DDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVG 324 + +L L L +D+ R++ + D + TC+ T + V Sbjct: 678 SAAARMLGSLPEAFLGQDMHERIHHSFPDSTTYPRATCRIQKTLEGGKGCKVDDEVYWRK 737 Query: 325 DRGTT----LKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQE 380 D + + + + G ++ L +Q QLT + R Sbjct: 738 DGTAFPVEYSSFPIIEDNQIIGAVVVFLDITERKRAEQ---------QLTLSHDQLRKLT 788 Query: 381 RQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNA 440 + + + EER IARE+HD + Q+L+ +K+++ L Q + R+ L I ++ Sbjct: 789 ARLESVREEERILIAREIHDELGQALTGVKLELCLLHDQIAEVSPMMRKKLESISTLVDG 848 Query: 441 SWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHL 499 + ++ + T R L + GL PA+E E+ A+ G LD L + + + Sbjct: 849 TIQSVQRIATELRPVVLDQLGLIPAIEWQAHEFQARTGIQCTLDVYLRAVTLSHAGSTAM 908 Query: 500 LQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRD 558 +I +E L+N +H+QAS V +T+ + + L V+DNG GV + G++ MR+ Sbjct: 909 FRIFQEILTNVARHAQASVVHITLQEQAGSLVLDVRDNGRGVTDAELADPHSLGLVGMRE 968 Query: 559 RAQSLRGDCRVRRRESGGTEVVVTFI 584 RA L G+ GT V V Sbjct: 969 RALLLGGETIFTGSPGTGTAVRVRIP 994 >UniRef50_D1CAA4 GAF sensor signal transduction histidine kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CAA4_SPHTD Length = 555 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 75/397 (18%), Positives = 144/397 (36%), Gaps = 37/397 (9%) Query: 228 AVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELR 287 + L Q+ Q + A L + L + + + S L + + + ++ + + Sbjct: 165 SRLYQQAQGQIAEL-------AILQRISSVISSSLDLDDVFQAIYDEIRGVMPTDAFIIG 217 Query: 288 VYDTDDEENHQEF------------------------TCQPDMTCDDKGCQLCPRGVL-- 321 + D + + QP M D + P + Sbjct: 218 LTREDGLLDLEFIADGGQRYAPVRAFKYSEVFRRALEERQPVMVGDVLDAEATPMRSVGH 277 Query: 322 PVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQER 381 + + L + G+L A +L+ T+ + R + Sbjct: 278 TRTKVRSVIAAPLIQGNEVIGLLSAQSYVPHRYRECDARLLMTIANHAVVAIENARLYRQ 337 Query: 382 QQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNAS 441 Q L + EER +ARE+HD++AQ L + + + L ++ R L+ + + + Sbjct: 338 AQSLAIAEERNRLAREIHDTLAQGLIGIILYLERLDLEIPQDDRRFRPLVERALSLARGN 397 Query: 442 WAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLL 500 + R + R L L AL E+ + F V+L L+ + L Sbjct: 398 LEEARRSVHDLRAAPLEGRTLVEALAHLAEDLRKERLFEVELSVPRALPLLAARVETALF 457 Query: 501 QIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI--RSNHYGMIIMRD 558 ++ +EA+SNA KH+ + + ++ V L V D+G G + ++ +G+ MR+ Sbjct: 458 RMVQEAISNARKHAGCKSLAIRLSVAGGMVTLEVHDDGRGFEVERVLGEAHRFGLSTMRE 517 Query: 559 RAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGD 595 R + G+ V GT V T IP T + + Sbjct: 518 RITQVGGEFTVESCPGDGTLVRAT-IPLSQATHSESE 553 Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 55/176 (31%), Gaps = 26/176 (14%) Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTD------ 292 L + L L + + + S L L+ +++ + L +R+YD + Sbjct: 2 ERLRRGEERLISLQRVSAAMSSDLDLDRTLTVLVDEARRLMHADTAVIRLYDEETDSLRL 61 Query: 293 --DEENHQEFTCQPDMTCDDKGCQLCPRGVLPV------------------GDRGTTLKW 332 + + Q + D C RG PV G+ L Sbjct: 62 IAEAGDEQGVLLGEVVPLDGSLSGYCFRGSRPVVSSDVQSDPRLGQEIKKATRFGSMLVV 121 Query: 333 RLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVM 388 L G+LL S + Q L+ L +Q + + R ++ Q I Sbjct: 122 PLLVRDRPIGVLLVGSYARGAFSEEDQTLLCLLADQAASAIENSRLYQQAQGQIAE 177 >UniRef50_C5C2U0 Histidine kinase n=2 Tax=Actinomycetales RepID=C5C2U0_BEUC1 Length = 431 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 64/256 (25%), Positives = 111/256 (43%), Gaps = 14/256 (5%) Query: 350 QGRHLSHDQQQLVDTLVEQLTATLALD-------RHQERQQQLIVMEERATIARELHDSI 402 RH + +Q L + AL+ + + ++ V++ER +ARE+HD++ Sbjct: 168 SDRHAAEQRQALAEVHEANARLEAALEENAGLHAQLLVQAREAGVLDERQRMAREIHDTL 227 Query: 403 AQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGL 461 AQ L+ + Q+ + Q PE+ ++ + S A+ R + + L + L Sbjct: 228 AQGLAGILTQLQAAE-QAAHEPEAWGRHVTNATDLARESLAEARRTVHAVEPEALADARL 286 Query: 462 RPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVV 521 A+ +S L PR + + LL+ A+EAL+N KH++AS V + Sbjct: 287 PEAIGDVARRWSEVNDVRADLTTTGDPRPMHVDVEVTLLRAAQEALANVAKHARASRVGL 346 Query: 522 TVAQNDNQVKLTVQDNGCGVPENAIRS-----NHYGMIIMRDRAQSLRGDCRVRRRESGG 576 T++ ++ V L V+D+G G +A R +G+ MR R Q L G V GG Sbjct: 347 TLSYMEDLVTLDVRDDGVGFEPDATRGQGHADGGFGLAGMRQRVQRLAGRLDVESEPGGG 406 Query: 577 TEVVVTFIPEKTFTDV 592 T + + V Sbjct: 407 TAISASVPAIPATPAV 422 >UniRef50_B4D5C3 Histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5C3_9BACT Length = 697 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 83/399 (20%), Positives = 152/399 (38%), Gaps = 39/399 (9%) Query: 190 SAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGL--EHKNQI 247 V + +++ L + L A L ++ + K L ++ Sbjct: 323 RRVGRGLPPKPIDVTA----GQLLEG--RLDRRLVRLQAQLVEQSRRKGEELLVMKAGEV 376 Query: 248 LSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMT 307 L N RL L+ + + +LT + R+ + ++ Sbjct: 377 LF-----NARLSPSDDGVSSLAN--DSILSLTGIC----RLQMGEHRPVLGDWPVS---- 421 Query: 308 CDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVE 367 +LP D +K + + LLA + + ++ V Sbjct: 422 --------AFELLLPSPDDVHVVKPPDWWTQQRAAWLLAVVTGLLVGAMCWVAMLRHRVR 473 Query: 368 QLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESS 427 TA ++ +R + + ER IARELHD++ Q L+ + M + + L Sbjct: 474 LQTAIIS-----DRLRAEAALNERERIARELHDTVEQDLAAIGMHFEVITDRALELEPMV 528 Query: 428 RELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQL 486 RE ++ S A + + R L E GL PALE + + +A G + Sbjct: 529 RENFEAAVRQVRRSQADMHHAVWDLRSGTLVERGLGPALEEALQLSAAHCGAVPECKEYG 588 Query: 487 PPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI 546 P R +P HLL+I +EA+SNA++H+ + + + + + + V+D+GCG A Sbjct: 589 PVRRLPGVIEHHLLRIGQEAMSNAVRHAAPKRISIALRYEGDTLTMRVEDDGCGFDVEAR 648 Query: 547 RSN--HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 N +G++ MR+R + + G V+ G+ V V Sbjct: 649 SQNTARFGLMGMRERVERIGGRLSVQSTPGTGSVVEVVL 687 >UniRef50_A4XZI6 Multi-sensor signal transduction histidine kinase n=17 Tax=Pseudomonas RepID=A4XZI6_PSEMY Length = 801 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 53/216 (24%), Positives = 103/216 (47%), Gaps = 1/216 (0%) Query: 369 LTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSR 428 L + A R + + EE+A IARE+HD + Q L+ +K++ + ++ Sbjct: 578 LADSRARLRELSAHLESVREEEKARIAREVHDELGQVLTVLKLETAMCELACAGQVPELD 637 Query: 429 ELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPP 488 E L+ ++ + + +R++ T R + + G+ A+E + + P ++ Sbjct: 638 ERLASMKRLIAQLFQLVRDVATALRPPILDAGIASAIEWQVRRFEERTQIPCLVEVPEHL 697 Query: 489 RLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS 548 +P QAI L +I +EAL+N ++H+ A VVV + Q + + L+V D+G G + Sbjct: 698 PRLPDAQAIGLFRILQEALTNVMRHAGAHSVVVRLWQEEGGLCLSVSDDGKGFDAAMRKP 757 Query: 549 N-HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 +G++ M++R L G ++ R GT + Sbjct: 758 GQSFGLVGMQERMLMLGGQLQIDSRPGEGTTLYARI 793 >UniRef50_B1Z4G8 Multi-sensor signal transduction histidine kinase n=1 Tax=Burkholderia ambifaria MC40-6 RepID=B1Z4G8_BURA4 Length = 665 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 13/237 (5%) Query: 361 LVDTLVEQLTATLALDRHQERQQ------QLIVMEERATIARELHDSIAQSLSCMKMQVS 414 ++ + E++ A AL + +E + Q + EE+ IARELHD + Q L+ +KM +S Sbjct: 418 MLRDVTERVRAETALKQSREELRDLSANLQNVREEEKTRIARELHDDLGQQLTALKMDLS 477 Query: 415 CLQMQGDALPE---SSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCE 470 +++ + RE L + ++++ A +R + R L + GL PA+E Sbjct: 478 AVELGLAGVVAPNTGVREQLGGMHGLIDSTVASVRRIAADLRPVMLDDLGLVPAIEWLAN 537 Query: 471 EYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQV 530 +++ ++ V D A L +I +EAL+N +HS A+ V + + + Sbjct: 538 DFTRRYRITVDRDIAPVDTAFTGVGATTLFRIVQEALTNVARHSDATNVQLALKLEEGYC 597 Query: 531 KLTVQDNGCGVPENAIRSN---HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 L + DNG G PENA +G+I +R+RA G V R G + V Sbjct: 598 VLRIADNGHGAPENARNEQDRPSFGLIGIRERAHMFEGTVTVDNRPGAGFTITVALP 654 >UniRef50_C7MRK1 PAS domain S-box n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK1_SACVD Length = 552 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 78/393 (19%), Positives = 142/393 (36%), Gaps = 28/393 (7%) Query: 210 AMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLS 269 L L+ M+ E+ + A+ + ++ L L ERL+ Sbjct: 169 GSLRATLDAMAREVCTTTAI----SAAQILAVDDPRDELRLL--GMAGFGETTDFVERLA 222 Query: 270 PVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTT 329 R ++R + + + + D + ++ D + Sbjct: 223 E--------CRRRGADIRFLEVLEHGEPVVVLHRKPVIMADPAWE-PLHVIMDWPDWDSF 273 Query: 330 LKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVME 389 + L GI+ A G + + + + R + ++ Sbjct: 274 VSMPLVVRGRTVGIINAYYAPGEDPGPSSLTFLSAMADHAAVAIETAALLTRTRSRAQLD 333 Query: 390 ERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSREL---LSQIRNELNASWAQLR 446 ER +AR+LHDS+ Q L M MQ L+ Q + +L ++ + A LR Sbjct: 334 ERRKLARDLHDSVVQHLFSMGMQAKALRAQLERPDADLSQLRGGAQELAELSQNALADLR 393 Query: 447 ELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQ-LPPRLVPSHQAIHLLQIAR 504 L+ R +L E GL A+ + A+ G + + + A + +I + Sbjct: 394 GLVFELRPMELAERGLVDAVRSHAASLQARTGLTIDVRAPVGDALDLDLEVAEDVYRIVQ 453 Query: 505 EALSNALKHSQASEVVVTV---AQNDNQVKLTVQDNGCG-----VPENAIRSNHYGMIIM 556 EAL N +KH+ A++ VT+ + + + + DNG G A R G+ M Sbjct: 454 EALHNVIKHANATKAEVTITTPEHDHRGLLVKISDNGRGKGQKPRDRTAFRRESLGLQSM 513 Query: 557 RDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTF 589 R+RA+ RG R SGG V V+ + ++ Sbjct: 514 RERAERWRGRLVAGPRPSGGWTVAVSLPAQGSY 546 >UniRef50_Q13H12 PAS/PAC sensor signal transduction histidine kinase n=5 Tax=Burkholderia RepID=Q13H12_BURXL Length = 384 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 65/236 (27%), Positives = 101/236 (42%), Gaps = 7/236 (2%) Query: 363 DTLVEQ-LTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKM---QVSCLQM 418 L EQ A R Q EE+ IARELHD + Q L+ +KM + + Sbjct: 134 QDLTEQNRLAEFEQLRRLATHIQATREEEQIRIARELHDDLGQQLAALKMALADLETILR 193 Query: 419 QGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFG 477 A+ + + + ++ + A LR + R L GL PALE +++ ++ Sbjct: 194 DNGAIAALTLTHTKDMHHLIDVTVASLRRIAAGLRPIVLETLGLVPALEWLIGDFTQRYH 253 Query: 478 FPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDN 537 V Q V + L I +EAL+N +H+ A EV V +A+ L V+DN Sbjct: 254 IDVNARIQTDDMNVSEAASEALFHIIQEALTNVARHAHADEVTVELARGGRTCVLRVEDN 313 Query: 538 GCGVPENA-IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDV 592 G G+ R +G++ MR+R L G + G + +TF P +T V Sbjct: 314 GQGMASATLPRETSFGLLGMRERVHRLNGSLSIDSTPGCGFRIAITF-PLETLERV 368 >UniRef50_D2SEJ2 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SEJ2_9ACTO Length = 372 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 115/229 (50%), Gaps = 4/229 (1%) Query: 359 QQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQM 418 Q+ VE A L + + ++L ER +AR++HD + L+ ++MQV + Sbjct: 144 QREQRARVELAEANEQLRGYAAQAEELATTRERNRLARDIHDGLGHHLTVVQMQVQAARA 203 Query: 419 QGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGF 478 Q + PE + +L++ + + + + A++R + R T P LR ALEA E+SA G Sbjct: 204 QLSSDPERADAVLAKAQQQASDALAEVRRSVAALRGPRTAPPLRVALEALTAEFSA-AGV 262 Query: 479 PVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ-NDNQVKLTVQDN 537 P L+ R +P+ L + A+E L+N KH+ AS VT+ +D V+L V+D+ Sbjct: 263 PAPLEVVGTERPLPAEAEESLFRSAQEGLTNVGKHATASSARVTLTYGDDGTVRLRVRDD 322 Query: 538 GCGVPENAIR--SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 G G+P +G++ +++RA G V GGTE++V Sbjct: 323 GRGLPAGGHGPYPGGFGLVGLQERAARAGGQLSVASVPGGGTELLVEVP 371 >UniRef50_C0Q8Z0 Two-component hybrid sensor and response regulator histidine kinase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q8Z0_DESAH Length = 708 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 7/224 (3%) Query: 362 VDTLVEQLTATLALDRHQERQQQLIVME----ERATIARELHDSIAQSLSCMKMQVSCLQ 417 ++ V++ T L + + R+ +ME ER +ARELHD + Q L+ +K+ ++ Sbjct: 475 LEQQVQKRTVELEKVQDKLRKLSGSIMEAHEIERGALARELHDHLGQVLTALKIDAVWIE 534 Query: 418 MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKF 476 + +I + ++ + +R++ R L + GL ALE+ ++ + Sbjct: 535 RFLSPRDPDAAVRAGRISSLIDDTIGDVRKMAFRLRPGVLDDLGLVEALESLTGDFEERS 594 Query: 477 GFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQD 536 P + S A L +IA+EAL+NA++HS+AS V +T+A + ++ L ++D Sbjct: 595 DITCLFQAAALPD-IDSTLATALYRIAQEALTNAIRHSRASIVALTLAMDQGKLVLKIKD 653 Query: 537 NGCGVPENAIRSN-HYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 NG G + I N +G+ M++RA G + GT V Sbjct: 654 NGVGFAFDDINENQGFGLAGMQERATLAGGVLEIVSGPEQGTSV 697 >UniRef50_C8WYI2 Histidine kinase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WYI2_ALIAD Length = 223 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 52/201 (25%), Positives = 105/201 (52%), Gaps = 3/201 (1%) Query: 387 VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLR 446 + EER IAR+LHD Q+L+ + M++ L+ D+ P+ +++ + Q+ + + ++R Sbjct: 19 LEEERRRIARDLHDGPVQALTNISMKLEVLKHMLDSNPQIAKDQVDQLHRRVTEAVKEIR 78 Query: 447 ELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQ--LPPRLVPSHQAIHLLQIA 503 L+ R + E GL A +A C ++ +G Q + + + + L ++ Sbjct: 79 ALIYDLRPLAVDEVGLIEATKALCSQFEKNWGISTSFVVQDGVTSAEITPAKQVALYRLI 138 Query: 504 REALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSL 563 +E L+N KH++A+ VV ++++ + +TV+D+G G N + HYG+I M++RA+ L Sbjct: 139 QEILNNIKKHARATTTVVEFLRDESDLIITVKDDGVGFDTNYVPPGHYGLIGMKERAEFL 198 Query: 564 RGDCRVRRRESGGTEVVVTFI 584 G + G+ ++ Sbjct: 199 GGRLEIHSIIGQGSTFIIRIP 219 >UniRef50_UPI0001B54039 histidine kinase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B54039 Length = 443 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 110/277 (39%), Gaps = 11/277 (3%) Query: 327 GTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQ-ERQQQL 385 G + + + G GR + ++++++D L L R + ++ Sbjct: 167 GVWISLVIVQTAAISGGGAVFAAVGRQ-NAERKRMLDQLAAAEAENRGLQRQLLAQAREA 225 Query: 386 IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQL 445 V++ER +++E+HD++AQ + + Q+ D E L+ + Sbjct: 226 GVLDERQRLSQEIHDTLAQGFTGIITQLEAAAQARDDTAE-WERHLAAATQLARENLTAA 284 Query: 446 RELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAR 504 R + R + L L AL +S + G P + + LL+I + Sbjct: 285 RRSVAALRPEPLEAATLPEALAEVARLWSERTGVPAEFSTTGTAVPLHPELEATLLRITQ 344 Query: 505 EALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP-----ENAIRSNHYGMIIMRDR 559 EALSN KH++AS +T++ ++V L +D+G G +G+ MR R Sbjct: 345 EALSNVAKHARASRAGITLSYMGDEVTLDARDDGVGFDPAHPPAPPSAEGGHGLPGMRRR 404 Query: 560 AQSLRGDCRVRRRESGGTEVVVTF--IPEKTFTDVQG 594 A+ L G V GGT V IP T +G Sbjct: 405 AERLAGALHVESEPGGGTAVSARLPAIPAATLDPTEG 441 >UniRef50_B4D830 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D830_9BACT Length = 725 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 65/283 (22%), Positives = 116/283 (40%), Gaps = 12/283 (4%) Query: 313 CQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTAT 372 C+L LP + L + + A R L + L Sbjct: 427 CELTTTHPLPFASAVDGFRLHLQKENGISILQRAPWWTLRRL-FWALGFIAGLALMAIVW 485 Query: 373 LALDRHQERQQ---------QLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDAL 423 AL R + +Q + ++ +ER IARELHD+I Q L+ + +Q+ + + + Sbjct: 486 AALLRRRVTEQTKTIATQIERAVIKDERQRIARELHDTIEQELAGLSVQLRNARQRLLNM 545 Query: 424 PESSRELLSQIRNELNASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKL 482 PE + + L + R + R + L + GL ALE + G + Sbjct: 546 PEQAGTAIELAERMLRHCREEARTSIRDLRSVALEQRGLPGALEETLAPLVEGSGARLSF 605 Query: 483 DYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP 542 + + R + IH+L+IA++A++NA++H+ E+ V + + V L V+D+G G Sbjct: 606 EARGRARSLAGPVEIHILRIAQQAVANAVQHAAPKEIRVHLEYLADAVTLEVRDDGRGFD 665 Query: 543 ENAI-RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 A H+G++ +R+RA + V GT + Sbjct: 666 PAAPAPRGHFGILGIRERANKIHATLTVDSAPGAGTTIRAVVP 708 >UniRef50_B7IV98 Sensor histidine kinase n=76 Tax=Bacillales RepID=B7IV98_BACC2 Length = 372 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 80/375 (21%), Positives = 154/375 (41%), Gaps = 40/375 (10%) Query: 242 EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTD-------DE 294 E + L L + L+ L + L VL+ L + L+ + D DE Sbjct: 5 EKEMHRLEALKEIAELLNEATNLQDMLEKVLHTLLQVMNLQTGWIFFIDESGKHSMLVDE 64 Query: 295 ENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTL------------------------ 330 + T Q + C R V ++ T + Sbjct: 65 NLPEALTWQEKKPMCEGNCWCVERFVNGRLEKATNIIECKRIEDAIECNWGETEDVTHHA 124 Query: 331 KWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEE 390 L ++G+L P H S ++ L++++ Q+ T+ + E++++ +V+ E Sbjct: 125 TIPLRSGSEKFGLLNVAAPHKTHFSEEELALLESIAFQIGTTIQRIQLVEKERKYVVVAE 184 Query: 391 RATIARELHDSIAQSLSCMKMQV-SCLQMQGDALPESSRELLSQIRNELNASWAQLRELL 449 R +AR+LHDS+ Q L + + L M D +E+LS I + ++ L+ Sbjct: 185 RNRLARDLHDSVKQLLFSIMLTAKGTLNMTQDR---ELQEMLSYIGELSQEALQEMTLLI 241 Query: 450 TTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSN 509 R + E GL A++ Y G V++ + + + L +I++EAL N Sbjct: 242 WQLRPEGLEKGLAEAIQ----NYGKLLGVQVEVRIDGMVSIGDEIEEV-LWRISQEALHN 296 Query: 510 ALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRV 569 KH+ +V V + +NQ+ ++DNG G ++ +R + G+ M++R Q ++G ++ Sbjct: 297 CKKHASCEKVHVLLKIENNQLFFYIEDNGIGFIQDQVRESALGLKSMKERIQLMKGSFQI 356 Query: 570 RRRESGGTEVVVTFI 584 GT++ + Sbjct: 357 ITELRKGTKIEIQLP 371 >UniRef50_B5JKT1 Histidine kinase domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JKT1_9BACT Length = 729 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 69/351 (19%), Positives = 142/351 (40%), Gaps = 26/351 (7%) Query: 251 LWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDD 310 L + RL +RL + ++ IE +++ + E +++ + Sbjct: 385 LVELEARLAETRWYSDRLLLTFDWGEST-----IEAQLHLQNSNEVPKDWLAGSIVRVSG 439 Query: 311 KGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQ-- 368 C + P+G + L L+ P R + ++ + Sbjct: 440 I-CSVLADAPRPLGGLWVPRSFELLLRSPS--DLIVVQPPPRWTAERIAWILLAFLVIAV 496 Query: 369 ------LTATLALDRHQERQQQLI------VMEERATIARELHDSIAQSLSCMKMQVSCL 416 + A+ R Q+ ++ + ++ ER +ARE+HD+++QSL + +Q+ + Sbjct: 497 IAVAVVMQASRYRLREQDHRRAMAETEFTAILNERNRVAREIHDTLSQSLGAISVQLELV 556 Query: 417 QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEP-GLRPALEASCEEYSAK 475 + + + + ++ LS + A+ R+ + R Q+ E L AL + Sbjct: 557 RTRANEMSAAALSHLSTAHELARGALAEARDSIWNMRSQVLERCDLSEALRRILTRLTDD 616 Query: 476 FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQ 535 G + + R +P +LL+I +EA++NA KH + S + V + +V L+V+ Sbjct: 617 TGVRFDIKVEGTKRRLPPVVENNLLRIGQEAITNACKHGKPSRIDVGLNFERRRVCLSVK 676 Query: 536 DNGCGVPENAIRSN---HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 D+G G + + +G++ +R+R L G V R G +VV Sbjct: 677 DDGVGFAIDEALNGSERSFGLVGLRERVDVLGGTIEVESRPGEGALIVVAV 727 >UniRef50_C6P6J2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6J2_9PROT Length = 355 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 120/265 (45%), Gaps = 11/265 (4%) Query: 331 KWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQL----- 385 + LA+ ++ +L +T G + + + L + + + L R Q++ ++ Sbjct: 71 RVTLANGEMKWLVLGSTPQSGENGKIEWEGLAVNVTKAKLDEIELLRSQQQLREFSSHIQ 130 Query: 386 -IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQ 444 +ER IARE+HD I L+ +KM ++ ++ + + + S I N + + Sbjct: 131 DAKEQERLRIAREVHDEIGGLLTAIKMDLAWIKERLPKSKKILTDKTSAIENMVGKAMTA 190 Query: 445 LRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVP---SHQAIHLL 500 R L + R L G+ A+E E+ + G L + +I L Sbjct: 191 ARNLAHSLRPGYLDSFGIVAAIEMEASEFEQRTGIKCLLAHNEEEDEELELHPDVSIALF 250 Query: 501 QIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI-RSNHYGMIIMRDR 559 +I +EAL+N +KHS+A++V V + + ++LT+ DNGCG ++A + +G+ +++R Sbjct: 251 RIFQEALTNIMKHSRANKVEVLIHNSQEHIELTISDNGCGFSQDARSKPRSFGLRGIQER 310 Query: 560 AQSLRGDCRVRRRESGGTEVVVTFI 584 G+ + GT V V Sbjct: 311 VAHFGGEVSISSTPEQGTRVYVKIP 335 >UniRef50_B5HYF1 Two-component system sensor kinase n=10 Tax=Streptomyces RepID=B5HYF1_9ACTO Length = 400 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 65/238 (27%), Positives = 104/238 (43%), Gaps = 15/238 (6%) Query: 365 LVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP 424 + L++ +E Q ++ V ERA IARELHD +A ++S M +Q DA P Sbjct: 164 FAQLEERNARLEKEREAQAKVAVAAERARIARELHDVVAHNVSVMVVQADGAAYVLDAAP 223 Query: 425 ESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGL-------RPALEASCEEYSAKFG 477 + +++ L I + + A++R LL R + G +E E+ G Sbjct: 224 DQAKKALETISSTGRQALAEMRRLLGVLRTGEHQEGGEYVPQPDVEQIEDLVEQCRG-SG 282 Query: 478 FPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASE-VVVTVAQNDNQVKLTVQD 536 PV + PR +PS + +I +EAL+N KH + V + D+ + L V+D Sbjct: 283 LPVDFKIEGTPRPLPSGVELTAYRIVQEALTNTRKHGGPNAGASVRLVYFDDGLGLLVED 342 Query: 537 NGCGVP-----ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTF 589 +G G P E +G+I MR+R + G R GG + +P K Sbjct: 343 DGKGAPHELYEEGGADGAGHGLIGMRERVGMVGGTLDAGPRPGGGFRIS-ALLPLKPA 399 >UniRef50_C3PKA7 Two-component system sensor kinase n=2 Tax=Corynebacterium RepID=C3PKA7_CORA7 Length = 419 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 17/249 (6%) Query: 343 ILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSI 402 + +A R LS Q+LV T + E ++ + ER IA E+HD++ Sbjct: 175 VTIAITYAFRALSSMNQELVKT----------RSQLVESERTAGMTAERQRIAHEIHDTL 224 Query: 403 AQSLSCMKMQVSCLQMQGDALP-ESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPG 460 AQ LS ++M + D ++E + R + + R ++ + L+E Sbjct: 225 AQGLSSIQMLLHAADRDLDQEDIPKAQERIELARRTAADNLHEARAMIAALQPAALSETS 284 Query: 461 LRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVV 520 L A+ + ++A G V +D + + +P LL+IA+ A+ N +KH+ AS+ Sbjct: 285 LGAAMTRMADNFAATGGVDVSVDVEGDTQQLPMKVEAALLRIAQGAMGNVVKHAHASKAR 344 Query: 521 VTVAQNDNQVKLTVQDNGCGVPENAIRS-----NHYGMIIMRDRAQSLRGDCRVRRRESG 575 VTV ++V++ V DNG G +A+ + H G+ MR RA+ L G+ + Sbjct: 345 VTVTYAPDEVRVDVVDNGQGFDVSAVENKPAGLGHIGLSAMRRRAEELGGEVVIESTPGS 404 Query: 576 GTEVVVTFI 584 GT V V+ Sbjct: 405 GTAVSVSVP 413 >UniRef50_C2C0V0 Possible histidine kinase n=5 Tax=Listeria RepID=C2C0V0_LISGR Length = 358 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 74/259 (28%), Positives = 123/259 (47%), Gaps = 16/259 (6%) Query: 340 QYGILLATLPQGRHLSHDQQQLVDTLVEQLT--ATLALDRHQE----------RQQQLIV 387 + G L L + S + Q V + +L L R QE + ++ I+ Sbjct: 86 EQGDLEKNLAIEKEESFAEIQQVYQQINRLRKKMQLQNARTQEIASGYAETAGQSKEAIL 145 Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP-ESSRELLSQIRNELNASWAQLR 446 +EER IARELHDS++Q L M +S L QG+ + ++ L + + +N S +++R Sbjct: 146 VEERHRIARELHDSVSQQLFAAMMLLSALNEQGEKNATPAMQKQLKLVESIVNDSQSEMR 205 Query: 447 ELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 LL R QL L+ +E +E +AK P+++ +++ + HL +I +E Sbjct: 206 ALLLHLRPTQLEGKSLKVGMEQLLQELTAK--IPIEVRWEIADIALKKGIEDHLFRIVQE 263 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRG 565 LSN L+HS+A+ + V +A D L V D+G G + YG+ MR+R + G Sbjct: 264 LLSNTLRHSKAALLEVRLAIVDQVAILKVVDDGVGFNVGEVAQGSYGLQNMRERVEEFGG 323 Query: 566 DCRVRRRESGGTEVVVTFI 584 ++ + GT V V Sbjct: 324 TIKIISFPNQGTSVEVKIP 342 >UniRef50_B0K3K4 Histidine kinase n=11 Tax=Thermoanaerobacterales RepID=B0K3K4_THEPX Length = 388 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 117/251 (46%), Gaps = 7/251 (2%) Query: 344 LLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIA 403 L++ + + + + ++T +EQL AL Q+ EER IARE+HD A Sbjct: 140 LVSQINVALNYLNRDLKKMNTQLEQLKDKRALSVKIIEAQE----EERKRIAREIHDGPA 195 Query: 404 QSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLR 462 Q+++ + + + E ++ L ++N + S ++R+++ R L + GL Sbjct: 196 QAMANVLSKSELCEKLITKDIEQAKIELKNLKNIVQQSLKEVRKIIYDLRPSALDDLGLI 255 Query: 463 PALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT 522 PAL + +S + G V + + I ++ +EAL+N KHS+A V Sbjct: 256 PALSRYIKNFSEETGIFVDFSVLSDYKRLSPEIEITCFRVVQEALTNIKKHSKAKNASVK 315 Query: 523 VAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVT 582 + + ++D+G G + I YG++ MR+R + L G + ++ GT++ ++ Sbjct: 316 FEFGMRFISIIIKDDGIGFDKENI-GQGYGLMGMRERIEILNGKFEISSFKNNGTQIYIS 374 Query: 583 FIPEKTFTDVQ 593 IP + D Q Sbjct: 375 -IPVRGVEDDQ 384 >UniRef50_Q45827 Uncharacterized sensor-like histidine kinase Caur_0899 n=4 Tax=Chloroflexaceae RepID=Y899_CHLAA Length = 597 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 93/485 (19%), Positives = 186/485 (38%), Gaps = 53/485 (10%) Query: 144 TTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQP--WRQLLAMASAVSHRDFTQRA 201 +R V + + +A + F RL+ P LL + Sbjct: 126 YAAIRQSRSVSLLSGLLAAVAYMAAFIAW---RRLIAPEALMTLLDYVALALRGTTLAIV 182 Query: 202 NISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSR 261 N +A + N + ++ EQ + E A + + L++ L S Sbjct: 183 PWVTGN-LAERQSEFNR--ERVTQAQRDAEQALSEARAYRDQ----MRSLYRVALTLGST 235 Query: 262 APLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQ------PDMTCDDKGCQL 315 A + L +L Q + R + + E + F D G Sbjct: 236 ANYRQVLDTLLQESQKIVPYRAGIVLLSSGQPNELYVAFGSNLAPGDLNRSLKMDTGLAA 295 Query: 316 CPRG----------VLPVGDRGTTLK-------WRLADSHTQYGILLATLPQGRHLSHDQ 358 R P + +L+ L YG+ + Q L+ DQ Sbjct: 296 ALRANTAQVITSFTQFPSLQQLGSLRTCKAAALLPLQAGMRVYGLFVVATDQT--LTTDQ 353 Query: 359 QQLVDTLVEQLTATLALDRH-----QERQQQLIVMEE-RATIARELHDSIAQSLSCMKMQ 412 +++ L L + +ER++ L EE R +AR+LHD AQ+++ + M+ Sbjct: 354 VEMLMALANYAIVALHNAQLIYDLKEEREKLLSHEEEVRHQLARDLHDGPAQAMAVITMK 413 Query: 413 VSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEE 471 ++ + P + L ++ + + ++R +L R L GL+ LE + Sbjct: 414 AEFIKRLLERDPAQALAELDELSSIAKRTNYEVRTMLFELRPLMLETQGLKVTLEQYLDR 473 Query: 472 YSAKFG-FPVKLD-YQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ-NDN 528 AK G + L+ + + S L + +E+++NA+KH++A+ + V + + ND Sbjct: 474 LRAKAGNTAIVLEGTDIDKVRLGSKVEGALFNMIQESVTNAIKHAKANHIWVRLRRLNDQ 533 Query: 529 QVKLTVQDNGCGVPENAI-----RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 +++ +QD+G G + A+ R +G++ + +RA+ + G + GT++ + F Sbjct: 534 MLEVVIQDDGVGFDKAAVLKSYERRGSFGLLNIDERARLVGGRAEIDSTPGKGTQITI-F 592 Query: 584 IPEKT 588 +P ++ Sbjct: 593 VPIES 597 >UniRef50_C0XNJ5 Two component system histidine kinase n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XNJ5_9CORY Length = 412 Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats. Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 18/252 (7%) Query: 345 LATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQ 404 +S +++ L+D L+ + E +++ V +ER +A E+HD++AQ Sbjct: 157 NYAFTTIARVSKERESLIDELLT------TRQQLAETEREAGVSQERERLAHEIHDTVAQ 210 Query: 405 SLSCMKMQVSCLQMQGDALP------ESSRELLSQIRNELNASWAQLRELLTTFRL-QLT 457 LS ++M + DA ++ + R +++ A+ R ++ LT Sbjct: 211 GLSSIQMLLHAADRDLDATGLPPGELARAKSRIETARRAASSNLAETRAMIAALTPAPLT 270 Query: 458 EPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQAS 517 E LR ALE ++S G ++++ +P LL+IA+ A+SNA++HS A+ Sbjct: 271 EASLRQALERIARDFSQASGIGIEVESDGEHTPLPMRCEAGLLRIAQGAVSNAVQHSGAT 330 Query: 518 EVVVTVAQNDNQVKLTVQDNGCGVPENAIRS-----NHYGMIIMRDRAQSLRGDCRVRRR 572 + VT+ + ++V+L V DNG G A+ S H G+ MR RA+ L G+ V Sbjct: 331 RIRVTLTYSPDEVRLDVVDNGRGFDPLALESAPTGLGHLGLSAMRSRAEELGGELIVESA 390 Query: 573 ESGGTEVVVTFI 584 G T V Sbjct: 391 PGGPTAVTAAIP 402 >UniRef50_Q01NC5 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC5_SOLUE Length = 437 Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 4/223 (1%) Query: 364 TLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD-A 422 L +A+ +H + +ER +I+RELHD + QSL+ + ++++ L Sbjct: 211 ALENASSASQEALKHLSARLVEAQEDERRSISRELHDEVGQSLTGVLLEMANLSKLIRTR 270 Query: 423 LPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVK 481 PES ++I+ E+ S +R + R L + GL PAL+ E S + G V Sbjct: 271 DPESVAAKAAEIKREVENSIGVVRNMALLLRPSMLDDLGLVPALQWQAREVSKRSGLWVS 330 Query: 482 LDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV 541 +D +P + +I +EAL NA++H+ A V V V Q ++++L ++D+G G Sbjct: 331 VDAASVSEDLPEEHKTCIYRIVQEALHNAVQHAGARHVKVAVEQQPDELRLAIEDDGKGF 390 Query: 542 PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 A + G++ +++R L G V GT + VT Sbjct: 391 D--AQQGRGMGLLGIQERVGYLGGKFEVGSAPGKGTALKVTLP 431 >UniRef50_D1VK31 Histidine kinase n=1 Tax=Frankia sp. EuI1c RepID=D1VK31_9ACTO Length = 459 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 6/242 (2%) Query: 353 HLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQ 412 L+ +QL ++ E + + ++ V EER +A E+HD++AQ L+ + Q Sbjct: 204 ELAETNRQLQASMDENAGLH---AQLLTQAREAGVAEERGRLAGEIHDTLAQGLAGILTQ 260 Query: 413 VSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEE 471 + + A P + A+ + R + R QL + L AL + Sbjct: 261 LEAARR-AHADPAEWSRHIELADGLARANLTEARRSVRALRPEQLEQASLSDALADLARD 319 Query: 472 YSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVK 531 +S + P + P P+ + + +IA+EAL+N +H+ A+ VT++ D+ + Sbjct: 320 WSRRTQVPAEAVTTGVPVRAPAETEMAVFRIAQEALANVARHAHATRARVTLSYLDDTLL 379 Query: 532 LTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFT 590 L V D+G G P +G+ MR RA+S+ G + GT V F T Sbjct: 380 LDVADDGAGFHPGAGAPPARFGVTGMRRRAESVAGTLSIESAPGDGTTVNAVFPLTPTPA 439 Query: 591 DV 592 + Sbjct: 440 EA 441 >UniRef50_UPI00016AFAA4 response regulator/sensory box histidine kinase n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AFAA4 Length = 672 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 73/233 (31%), Positives = 117/233 (50%), Gaps = 10/233 (4%) Query: 362 VDTLVEQLTATLALDRHQERQQQL------IVMEERATIARELHDSIAQSLSCMKMQVSC 415 V + E+ A AL +E ++L I EE A IARELHD Q L+ +KM V+ Sbjct: 430 VADIAERKRAEEALRISREELRRLSAHIQKIREEEMARIARELHDDFGQQLTALKMAVTL 489 Query: 416 LQMQGDALPES--SRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEY 472 L+ + A PE SR LS I ++ +R R L + GL PA++ EE+ Sbjct: 490 LEHKKPAGPERLISRNDLSSIYALIDQLINSVRRFAADLRPAMLDDLGLIPAIDWLIEEF 549 Query: 473 SAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKL 532 SA++ V + + +I +EAL+N +HS A+EVV+ + ++D+ + Sbjct: 550 SARYHVHVTRHIDAQAIHFNRESRVGVFRIVQEALTNVARHSAATEVVIDITRDDSHCIV 609 Query: 533 TVQDNGCG-VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 + DNG G V ++++ +G++ MR+RA L GD ++R G + VT Sbjct: 610 RIADNGRGAVRDSSLGRRSFGLLGMRERAALLGGDTQIRTSPGAGFVLTVTLP 662 >UniRef50_Q5NZX5 Putative sensory protein, two-component system n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NZX5_AZOSE Length = 498 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 69/335 (20%), Positives = 142/335 (42%), Gaps = 25/335 (7%) Query: 263 PLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLP 322 R V +G+ L+ L +LR ++ PD + + Sbjct: 171 DDLPRFQYVSDGIVALSRLAPEKLR-----RSSDNFTGLIHPD------DIAAFHQSMKS 219 Query: 323 VGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQ 382 + T W + +L L L D ++ T + + Sbjct: 220 SSETLTRWSWAGRLCAGTHAERWISLQATPRLMDAGMVLWDGIMLDATDARRNEEKLRQS 279 Query: 383 QQ----------LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLS 432 ++ +I EE++ IARE+HD + Q L+ +KM +SC++ G S ++L Sbjct: 280 EEFLRDLCVRVGMIREEEKSAIAREIHDELGQLLTVLKMDLSCMREAGGLDSRSVAKML- 338 Query: 433 QIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPP--RL 490 ++ + + ++R++ +T R ++ + GL PA+E +E+S+ +L Sbjct: 339 RMESLTDDILYRVRDIASTLRPKVLDLGLAPAIEWLAQEFSSHTRIVCRLSINGDELCGN 398 Query: 491 VPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNH 550 + S + +I +E+L+NA +H++A + +++ + ++L ++D+G G +A+ Sbjct: 399 LDSTAITAIFRIVQESLTNAARHARAKHIDISLTRRGQFLQLLIRDDGVGFDPDALPICC 458 Query: 551 YGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 G+ +R+RA L + R+ GT + V IP Sbjct: 459 NGLSGIRERAVILGAELRIDSSAHTGTTLEV-LIP 492 >UniRef50_UPI00017893B7 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017893B7 Length = 357 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 108/246 (43%), Gaps = 3/246 (1%) Query: 351 GRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMK 410 G L ++ D + + + E+ + ++EER +ARELHD+++Q L + Sbjct: 108 GEQLVKISKRWEDQVSSLQRLSTNNAQLAEQARVTAIVEERQRLARELHDAVSQQLFAIS 167 Query: 411 MQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASC 469 M + + D + ++ ++ I + +++R LL R L L L Sbjct: 168 MTATAVGRTLDKDFDKAQRQVALIEEMSAVAQSEMRALLLHLRPVYLEGKALEQGLRDLI 227 Query: 470 EEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQ 529 E K + + L+ HL +I +EA+SN L+HS+A ++ + + + N Sbjct: 228 TELRIKVPMEITFEMDDDIHLL-KGIENHLFRIIQEAMSNTLRHSKAEKMDIRIHRRQNT 286 Query: 530 VKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTF 589 V++ ++D+G G + + YG+ M++R + G + GT + + +P Sbjct: 287 VRVMLRDDGVGFELDDKKQTSYGLSTMQERVTEIGGSLQFITAPGKGTRIEI-IVPLINE 345 Query: 590 TDVQGD 595 +GD Sbjct: 346 ERKRGD 351 >UniRef50_A5GBT2 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GBT2_GEOUR Length = 610 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 5/221 (2%) Query: 367 EQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPES 426 E+ A L+L++ + R ++ + EER IAR++HD +AQ L+ M M+ S + + E Sbjct: 378 EREAARLSLEKSR-RAEETAIDEERRRIARDIHDGVAQDLAMMNMRASVWEHLVHSNREK 436 Query: 427 SRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQ 485 E + R L+ + ++R + R +L E G A+ +E+ G + L+ Sbjct: 437 MTEEIKLFRKLLHKNIGEVRRAIFAMRPVELDELGFSEAVGRYVKEFGQYTGLRIDLEMA 496 Query: 486 LPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN-DNQVKLTVQDNGCGVPEN 544 +P + L +I +E+L+N KH+ A+E V ++ + + +++ DNG G + Sbjct: 497 GD-IAMPRQLELELYRIIQESLNNIAKHAGATEAGVRISDDVAGCLTVSIADNGKGFDLS 555 Query: 545 A-IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 A +S G+ M++R + G + G + + F Sbjct: 556 ALAQSPRLGLRQMKERVERRNGTFLIDSGPGRGAAITICFP 596 >UniRef50_C4XMF3 Two-component sensor histidine kinase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF3_DESMR Length = 704 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 90/444 (20%), Positives = 151/444 (34%), Gaps = 40/444 (9%) Query: 153 VLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAML 212 + + + + + ++ +L L + + + ++G +E++ L Sbjct: 274 RAMVGSLTTIGIMFGLAMLYFVERFILSRVTGLGQEIAQLGQGSRKRVTPLAGNDEVSAL 333 Query: 213 GTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVL 272 A+N M EL + A + R L Sbjct: 334 SRAVNLMLDELDAARAH----------------------YVMATRAAKVGVWE------L 365 Query: 273 NGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKW 332 L ++ + + D + D + L G + Sbjct: 366 QPDAGLIVVDPVIAGLLGYDSPGQPEALALWLDRLAPEDRDSLVRPGQHLFDKPTFEREL 425 Query: 333 RLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVE--QLTATLALDRHQERQQQLIVMEE 390 R+ + L +LV T V+ +L R + E Sbjct: 426 RVVAAQGGVLCFLCRGQFVPGADGSPSRLVATAVDITELKQAAESIRALSGRLMQAQESE 485 Query: 391 RATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLT 450 RA+IAR+LHD++AQ LS +K+ L + + R+ L L + A +REL Sbjct: 486 RASIARDLHDNVAQDLSSLKIAYETLLDGLADVDAALRQRLEAASGLLARTIASVRELAY 545 Query: 451 TFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLD-YQLPPRLVPSHQAIHLLQIAREALS 508 R L GL AL +E G V L V + AI+L +IA+EAL+ Sbjct: 546 GLRPPNLEHLGLDQALRRLSQEMGQASGLAVSYAGVGLEGLDVDADVAINLFRIAQEALA 605 Query: 509 NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP--------ENAIRSNHYGMIIMRDRA 560 N KH+ AS V + + ++ ++ L ++D+G G G+I MR+RA Sbjct: 606 NVRKHAGASRVEMRLIESYPKLILRIRDDGRGFDAVREHGDCPGEASRPCMGLINMRERA 665 Query: 561 QSLRGDCRVRRRESGGTEVVVTFI 584 G RV GT VV Sbjct: 666 GLFGGSLRVISSPGHGTTVVAEVP 689 >UniRef50_B4D809 Histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D809_9BACT Length = 729 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 63/233 (27%), Positives = 111/233 (47%), Gaps = 8/233 (3%) Query: 361 LVDTLVEQLTATLA---LDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ 417 L+ VEQ + LA R + + + ER +A +LHD++ Q L+ + +V + Sbjct: 489 LLRRKVEQRSVQLADEMRARREAAVEFEATLRERQRLAADLHDTLEQGLTGIAFRVETMV 548 Query: 418 MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKF 476 +Q + + E L ++R+ L+ +R + R L L AL+AS + S + Sbjct: 549 VQ-HTKAQDNSENLERVRHLLSGVREDVRRSVWNLRADALEGHTLAEALQASADRLSGQS 607 Query: 477 GFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQD 536 V ++ + +P A +LL +A+EA++NALKH + + + + + ++LTV+D Sbjct: 608 NLIVAVETDGTSQDLPDLIAGNLLLLAQEAMTNALKHGEPRSIFLRLVFAGDTLRLTVED 667 Query: 537 NGCGVPENA---IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 +G G R H+G+ MR+R + L G V GT + VT E Sbjct: 668 DGRGFDTAQMATPREGHFGIQGMRERVKRLGGIFEVSSAPGKGTRISVTVPIE 720 >UniRef50_B4D2I1 Histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2I1_9BACT Length = 670 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 5/223 (2%) Query: 374 ALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQ 433 ++ + + ++ V EER IARELHDS+AQ L+ + +Q+ + ++ +++LL Sbjct: 436 QMETIRSQLERAAVSEERTRIARELHDSLAQHLASITIQLDAVAVRLKTEEGDTQQLLET 495 Query: 434 IRNELNASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVP 492 R S Q R + R L GL A+ + + + G +++ + R + Sbjct: 496 AREMAAHSMDQTRLAIWDLRSPTLARDGLVAAIHEVVQPLTERRGTLLRVTLEGEVRRLG 555 Query: 493 SHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV---PENAIRSN 549 HLL+I +EA +NAL+H +++ + V + +T+ DNG G A+ Sbjct: 556 GGAENHLLRIVQEASANALQHGSPTQIEIAVLFRAQGLMVTIHDNGAGFRVPSPGALPVA 615 Query: 550 HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDV 592 H+G+ M +RA+ + G + GT + V +IP + + Sbjct: 616 HFGLRGMFERAKKIGGQLVLESEPGAGTTISV-WIPWRQTVEA 657 >UniRef50_B2UDW5 Multi-sensor signal transduction histidine kinase n=12 Tax=Burkholderiaceae RepID=B2UDW5_RALPJ Length = 485 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 80/349 (22%), Positives = 145/349 (41%), Gaps = 16/349 (4%) Query: 253 QANRRLHSRAPLC----ERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTC 308 Q +R+L L L+ ++ +E D + T + Sbjct: 117 QVSRKLTEMELTLIYGKRDLEVALDLVRTDFGKASMEAVRQGLDRLRQREIATVARSLEH 176 Query: 309 DDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQ 368 ++ L G+ + L L H + LA + R ++ ++ Q +D +V + Sbjct: 177 AERDLALSRYGIALITAVNIILLVVLGMQHAKR---LAVTERERDMAEEESQKLDRMVRE 233 Query: 369 LTATLA-LDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESS 427 T L+ L H +R + +E+ +ARELHD + L+ KM + L+ + A + Sbjct: 234 RTRQLSDLAAHLQR----VTEDEKTRLARELHDELGAILTATKMDLHWLRSRIHANEPAV 289 Query: 428 RELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQL 486 E ++++ ++ R L+ R L GL AL E+ + G+ ++ Sbjct: 290 SEKITRVMAHVDQGIQIKRRLIEDLRPTILLNLGLVEALSQLTEDVGTRNGWHTEVSLPD 349 Query: 487 PPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI 546 + AI L +I +E+L+NA K++ A+ V V + + V+L V+DNG G P + Sbjct: 350 DMPKLTDDAAIALYRIVQESLTNASKYAHATTVSVALDVGEEGVRLRVRDNGRGFPADIE 409 Query: 547 RS---NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDV 592 R H+G++ M RA +L G + GG ++V P D Sbjct: 410 RRRMVGHHGLLGMEQRAIALGGTLVIDSMPGGGVTIIVELPPSDAVFDR 458 >UniRef50_C0VWJ7 Two-component sensory kinase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VWJ7_9CORY Length = 402 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 71/284 (25%), Positives = 128/284 (45%), Gaps = 18/284 (6%) Query: 321 LPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQE 380 +P G ++ L GI R +S +++QL+D L++ + + + Sbjct: 126 VPTGITVGSVVGPLLGGCVTIGIAFVFRRMWR-MSAEKEQLIDQLMKTRS------QLAQ 178 Query: 381 RQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA--LPESSRELLSQIRNEL 438 + + + ER IA E+HD++AQ LS ++M +S + +A E + ++ + Sbjct: 179 TEHEAGMAAERQRIAHEIHDTVAQGLSSIQMLLSVAEADINAGKPKEEPLKKIAIAKKSA 238 Query: 439 NASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAI 497 + A+ R ++ + L + L ALE E + V + + R +P Sbjct: 239 ADNLAEARAMIAALQPAALAKTNLEGALERIAENIES---VDVNISVEGEDRQLPMRTET 295 Query: 498 HLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS-----NHYG 552 LL+IA+ AL N +KHSQA+ +VT+ + ++V+L V DNG G + + H G Sbjct: 296 TLLRIAQGALGNVVKHSQATAALVTLTYDPDEVRLDVVDNGVGFDPAQVAARPRGLGHIG 355 Query: 553 MIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDT 596 + MR+RA+ + G + GT + V T D + D Sbjct: 356 VDAMRERAREVGGTLAIESTPGQGTAISVAVPIINTMGDERKDE 399 >UniRef50_D0BKY9 Sensor histidine kinase VraS n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BKY9_9LACT Length = 351 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 64/251 (25%), Positives = 124/251 (49%), Gaps = 5/251 (1%) Query: 343 ILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQ-ERQQQLIVMEERATIARELHDS 401 +L+ L + ++ + LV+ L + + E ++ I+ ER IARELHDS Sbjct: 104 LLMIRLDTFFQETAKIAEMQEQLVQNLQQISSRPEYIGEETKEEIIELERHRIARELHDS 163 Query: 402 IAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPG 460 ++Q L M +S + Q + L ++ L+ + +N S +++R LL R L Sbjct: 164 VSQQLFAAMMMLSAMNEQKEQLSPVIQQQLALVEKVINDSQSEMRALLLHLRPISLENKT 223 Query: 461 LRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVV 520 L +E+ +E + + L ++L +PS HL +I +E +SN L+H++A ++ Sbjct: 224 LVQGIESLLKELT--TKVQLSLHWELDEVTLPSTFEDHLFRIVQELVSNTLRHAKAKQLE 281 Query: 521 VTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVV 580 V + Q D+ + L + D+G G + ++ YG+ + +R + G C++ + GT + Sbjct: 282 VFLKQKDDYIILKLVDDGIGFDTSVSKAGSYGLKNIEERVAGMGGQCKIISIANQGTIIE 341 Query: 581 VTFIPEKTFTD 591 + IP+K + Sbjct: 342 IK-IPQKQEKE 351 >UniRef50_UPI000169369A sensor histidine kinase n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169369A Length = 224 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 2/212 (0%) Query: 374 ALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQ 433 + E+ + ++EER +ARELHD+++Q L + M + D + ++ + Sbjct: 4 HNAQLAEQARVSAIVEERQRLARELHDAVSQQLFAISMTATAALRTLDKDFDKAQRQIFL 63 Query: 434 IRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVP 492 I + +++R LL R L L L +E AK + D +P Sbjct: 64 IEEMSAVAQSEMRALLLHLRPVHLEGNPLAVGLHKLLQELKAKVPIEIVEDLD-EEIRLP 122 Query: 493 SHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYG 552 HL +I +EALSN+L+HS+AS++ V + + ++L+++DNG G + + YG Sbjct: 123 KGIEDHLFRIVQEALSNSLRHSKASKLEVKLHHRGDGLRLSIRDNGIGFEIDNTKQASYG 182 Query: 553 MIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 + MR+R + G ++ GT + + Sbjct: 183 LHTMRERVNEIGGSLQIITAPGKGTRIEIRVP 214 >UniRef50_B1YJQ1 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Exiguobacterium RepID=B1YJQ1_EXIS2 Length = 341 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 3/225 (1%) Query: 360 QLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ 419 + +D VE + +H E+ + + EER +AR+LHDS++Q L + M + + Sbjct: 111 KRIDEQVETVQKISTRPQHIEQVRVQAITEERKRLARDLHDSVSQQLYAISMMTTAAKQT 170 Query: 420 GDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGF 478 PE++ + + + + +++R LL R +L L+ L EE S K Sbjct: 171 ILTQPETAAKQIDLVETMAQTAQSEMRSLLLQLRPVELEGMTLQQGLTQLLEELSRKQ-- 228 Query: 479 PVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNG 538 +L ++L +P L +I +E L+NAL+H++AS + + + Q ++ V L++ D+G Sbjct: 229 STELSWKLEVIELPRPIENELFRIVQEGLTNALRHAKASHMDIELRQFNDTVILSMNDDG 288 Query: 539 CGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 G + + YG+ MR+R + G R+ GT++ V Sbjct: 289 VGFVVDEKKLASYGINSMRERTAEMGGTIRLVSVPGQGTQIEVKL 333 >UniRef50_UPI0001693FB4 two-component sensor histidine kinase of nitrate reduction n=2 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693FB4 Length = 386 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 64/318 (20%), Positives = 124/318 (38%), Gaps = 15/318 (4%) Query: 269 SPVLNGLQNL-TLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRG 327 +P L L + I ++ + + + + PV + Sbjct: 75 NPAARQLLQLPEDAKKISYCSLCSNYPGLEKLCDYDSCYVATHQHEPVEVQIRTPVSESA 134 Query: 328 TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIV 387 + +G + R + ++++ + + + +T ++ + Sbjct: 135 SVTVTTSEYEDPDHGPMFIL--GVRKVGDERKEEQEKIAKMITRSILQAQ---------- 182 Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRE 447 ER I+RELHD I Q L M + + ++ + + +S L ++ +R Sbjct: 183 ENERKRISRELHDGIGQQLYIMMIHLGMIKAEAEGQ-DSIINPLGELEESTRLLIQDVRH 241 Query: 448 LLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREA 506 L R L + GL AL ++YS KFG V Y+ P+ L +I +EA Sbjct: 242 LSAELRPSTLDDIGLVAALRNYIQDYSHKFGIQVHFAYEGSKERFPAPVETALYRICQEA 301 Query: 507 LSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGD 566 L NA K++Q + + + + +Q +L+VQD G G + G+ M +RA L G Sbjct: 302 LINAAKYAQTENIHILLDREPDQARLSVQDFGVGFELKPGTARGVGLYSMEERAGILGGS 361 Query: 567 CRVRRRESGGTEVVVTFI 584 + +++ GT++ V Sbjct: 362 VTITSQKTKGTKIEVRIP 379 >UniRef50_UPI00017468E2 histidine kinase n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017468E2 Length = 698 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 63/218 (28%), Positives = 110/218 (50%), Gaps = 5/218 (2%) Query: 369 LTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSR 428 L L Q + QQ V+EER IARE HD++ Q L+ + +++ + + +R Sbjct: 473 LQVNRQLGLLQLKTQQEAVLEERQRIAREFHDTLEQELAGLSLRLDAATPRV--ADDKAR 530 Query: 429 ELLSQIRNELNASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLP 487 +LL Q R L+ + R+ + R E L AL+ + P++++ Sbjct: 531 QLLEQQRKLLSRLQTETRDFVWDLRDASRNEVPLPEALQGLVDHLQTTTAIPIQVEVHGE 590 Query: 488 PRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN--A 545 +P HLL+IAREA++NALK++ +V+V V + ++LTV D+G G + + Sbjct: 591 IPPLPPLVQHHLLRIAREAVNNALKYALPQKVIVKVETDAQVLRLTVADDGKGFDPSKMS 650 Query: 546 IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + H+G+ MR+R++ L + ++ GGT V +T Sbjct: 651 VSGGHFGLQGMRERSRKLHTELSLQSTPGGGTSVGLTL 688 >UniRef50_Q9KDL3 Two-component sensor histidine kinase n=1 Tax=Bacillus halodurans RepID=Q9KDL3_BACHD Length = 351 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 6/237 (2%) Query: 353 HLSHDQQQLVDTLVEQLT----ATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSC 408 L+ ++ + + EQ+ + + QE ++ V EER +AR+LHD+++Q L Sbjct: 110 ELTDRLNRMAERVEEQVASLQRLSSERAKMQETVKKAAVTEERQRLARDLHDAVSQQLFA 169 Query: 409 MKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEA 467 + M + ++ E ++ + + N + A++R LL R +L L+ +E Sbjct: 170 ISMMTAAIKQNLHEATEEVQQQMDVVEKMANTAQAEMRALLLHLRPAELEGKSLQQGVEY 229 Query: 468 SCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND 527 E K GF + + P +P L ++ +EA+SN L+H+QA V V Q + Sbjct: 230 LLHELEQKQGFKITKRLE-PMDELPKGVEDQLFRMLQEAISNILRHAQAHHVEVRFWQTE 288 Query: 528 NQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 QV+L + D+G G YG+ M +R + G + GT++ Sbjct: 289 RQVRLKLIDDGVGFDVQKETHGSYGLQTMHERINEIGGVLDIVSAPGKGTQLEAKIP 345 Score = 43.4 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 80/249 (32%), Gaps = 6/249 (2%) Query: 150 ETVVLVHRVMAVFMALLLVFTIIWLRAR--LLQPWRQLLAMASAVSHRDFTQRANISGRN 207 + +V + ++ + ++++ + I + + + Q+L F+ + G + Sbjct: 47 KQIVRLPILVPILLSMIAIGLIAGMMQSLPIKRKLDQILHGVLLYERGTFSHQIESEGED 106 Query: 208 EMAMLGTALNNMSAELAESYAVLEQ--RVQEKTAGLEHKNQILSFLWQANRRLHSRAPLC 265 E+A L LN M+ + E A L++ + K K + + R LH A Sbjct: 107 ELAELTDRLNRMAERVEEQVASLQRLSSERAKMQETVKKAAVTEERQRLARDLH-DAVSQ 165 Query: 266 ERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGD 325 + + + L + V D T Q +M + + Sbjct: 166 QLFAISMMTAAIKQNLHEATEEVQQQMDVVEKMANTAQAEMRALLLHLRPAELEGKSL-Q 224 Query: 326 RGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQL 385 +G + + I P + QL L E ++ L + + + Sbjct: 225 QGVEYLLHELEQKQGFKITKRLEPMDELPKGVEDQLFRMLQEAISNILRHAQAHHVEVRF 284 Query: 386 IVMEERATI 394 E + + Sbjct: 285 WQTERQVRL 293 >UniRef50_B2JH43 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Burkholderia phymatum STM815 RepID=B2JH43_BURP8 Length = 493 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 14/247 (5%) Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 G L R L+ ++ +EQL L ER ++ EE+ IARELHD Sbjct: 250 GALQGFAKVTRDLTEHKR------LEQLEHVGELAAATERARE----EEKKRIARELHDD 299 Query: 402 IAQSLSCMKMQVSCLQMQGDAL--PESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTE 458 + Q L+ +KM LQ +A + + + + + + LR + + R L + Sbjct: 300 LGQQLTALKMSAVILQQDVEAGHYTAETAAKARGLVVQADDTMSALRRIASNLRPTMLDD 359 Query: 459 PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASE 518 GL PA+E +E+S ++G + + +I +EAL+N +H+ A+E Sbjct: 360 LGLLPAVEWLADEFSRRYGIKASTRLSAGELAFSDTASTAIFRIVQEALTNVARHACATE 419 Query: 519 VVVTVAQNDNQVKLTVQDNGCG-VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 VVVT+ +DN ++ + DNG G + + +G++ +R+R + L G + R G Sbjct: 420 VVVTIELDDNACEVRIDDNGRGAASAPGDKPDSFGLLGIRERVRQLNGTVSLGNRLDRGF 479 Query: 578 EVVVTFI 584 V + F Sbjct: 480 RVQIRFP 486 >UniRef50_B4WLR8 GAF domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WLR8_9SYNE Length = 1245 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 81/434 (18%), Positives = 153/434 (35%), Gaps = 82/434 (18%) Query: 230 LEQRV---QEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIEL 286 LE+R + + A L N+ ++ ++ L + L + L +L+ + L Sbjct: 809 LEERECAARNRAAELVKLNETIA---RSLSTLTATPELDDFLGQLLDQMSEQIGACKAYL 865 Query: 287 RVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGT------------------ 328 +YD D + +Q T Q P+ + Sbjct: 866 FLYDKDTDTLNQYVTAQAGEIHRGVAPGDPEMFRHPIPSDRSEVWKMIVNSSKPFTLDRK 925 Query: 329 -----------TLKWRLADSH------------TQYGILLATLPQGRHLSHDQQQLVDTL 365 TL W A+ H G + L+ +Q + + L Sbjct: 926 QPAQAELCWPDTLPWHEAEGHLGATCACMKVGNKPIGFITFAFRHLPTLTDEQLEFIQAL 985 Query: 366 VEQLTATLALDRHQERQQ----QLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD 421 Q T + L R +R Q + +ER +ARE+HD++AQS + + +Q+ + Sbjct: 986 TNQATLAIHLTRLAKRSQTAALSAALTDERNRLAREIHDTLAQSFTGISLQLEAAKGLIH 1045 Query: 422 A---------LPES--------------------SRELLSQIRNELNASWAQLRELLTTF 452 A +P+ + L++ + R + Sbjct: 1046 AASTSKILNDIPDKFELSLTSKTEVLDATAGLSEAEVYLNRAGKLARQGLLEARRSVRAL 1105 Query: 453 RLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNAL 511 R Q L L AL+ + +E + + P +P ++L+I +EAL+NAL Sbjct: 1106 RAQALETDTLPKALKTAIQEMTLDSAMQAEFTLIGTPYDLPEDIQTNILRIGQEALTNAL 1165 Query: 512 KHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS-NHYGMIIMRDRAQSLRGDCRVR 570 +H+QA +T+ ++++L + D+G G + +G+I MR+R G+ Sbjct: 1166 RHAQAQHFSLTLQFEPHRIQLRIADDGQGCEIEPFSNLESFGLIGMRERVLYFDGEFTFD 1225 Query: 571 RRESGGTEVVVTFI 584 GT + + Sbjct: 1226 SAPGKGTVINIVIP 1239 >UniRef50_C9RWH5 Integral membrane sensor signal transduction histidine kinase n=13 Tax=Bacillaceae RepID=C9RWH5_GEOSY Length = 344 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 3/234 (1%) Query: 352 RHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKM 411 R + Q Q ++ +ER + I+ EER +ARELHDS++Q L M Sbjct: 104 RQIVKLQTQWLEQTKRVQKLAAEKAEQEERLVERILSEERTRLARELHDSVSQQLFAASM 163 Query: 412 QVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCE 470 +S + E R+ L + ++ S ++R LL R L L+ + Sbjct: 164 MMSAVMETMPPDDERHRKQLKMVEQMIHQSQLEMRALLLHLRPVHLKGKSLQEGMNELLT 223 Query: 471 EYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQV 530 E + K P+++ +++ + HL +I +E+LSN L+H++A + V + + D Sbjct: 224 ELAGK--VPLEMKWKIEDISLDKGVEDHLFRILQESLSNTLRHAKAKSLEVLLIERDGFA 281 Query: 531 KLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 L V D+G G +S YG+ M +RA + G ++ + GT + V Sbjct: 282 ILRVTDDGVGFDVERSKSGSYGLQHMYERAAEIGGMLKIVSLKGQGTRLEVKVP 335 >UniRef50_Q67QY8 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY8_SYMTH Length = 346 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 67/253 (26%), Positives = 106/253 (41%), Gaps = 16/253 (6%) Query: 349 PQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSC 408 P +S ++D L E A A Q EER IARELHD AQSL+ Sbjct: 102 PDIARVSEMANLMLDRLAEHRQAVAA-------QILRAQEEERKRIARELHDETAQSLTS 154 Query: 409 MKMQVSCLQMQ--GDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPAL 465 + + + ++ Q G + E+ E L + + + R L+ R L + GL PAL Sbjct: 155 IVVNLEAIERQAVGSGVDEALCERLHLTKEVAQRTLDETRRLMMDLRPSVLDDLGLVPAL 214 Query: 466 EASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ 525 G +P L +I +EA++N +KH++A V+V + + Sbjct: 215 RWFINHRVLPAGLEADFQVSGLTERLPEELETALFRIMQEAITNVVKHAKAKTVLVRLHR 274 Query: 526 NDNQVKLTVQDNGCGVPE-----NAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVV 580 ++ V D+G G +R G+ M++RA + G V GT V Sbjct: 275 EHGEITGLVVDDGQGFHVVHTVGQPVRDRGLGLFGMQERAALVGGKVVVESAPGRGTTVR 334 Query: 581 VTFIPEKTFTDVQ 593 VT +P++ DV+ Sbjct: 335 VT-VPDRRGGDVR 346 Score = 43.4 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 2/118 (1%) Query: 154 LVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRAN-ISGRNEMAML 212 + + ++ + L +P L A V DF+ R + G ++A + Sbjct: 48 IWEFGLIAVGLVVSLGVNYALLRVAFRPLFTLHATLDRVRRGDFSARVPMVPGDPDIARV 107 Query: 213 GTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSP 270 N M LAE + ++ E K + + L S E + Sbjct: 108 SEMANLMLDRLAEHRQAVAAQILRAQEE-ERKRIARELHDETAQSLTSIVVNLEAIER 164 >UniRef50_A8LRP9 Integral membrane sensor signal transduction histidine kinase n=28 Tax=Rhodobacterales RepID=A8LRP9_DINSH Length = 480 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 128/301 (42%), Gaps = 15/301 (4%) Query: 285 ELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGIL 344 E R+ ++ + DD + T W L Sbjct: 171 EARMITYVVGLQDWQWALGTGIFIDDVLTHVAAARAATESRIAQTFFW---IGAITLAAL 227 Query: 345 LATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQ 404 LA G ++ +++L D ++ LT + + EER +ARELHDSI+Q Sbjct: 228 LAVFASGLLINIRERRLADAKLKALTQRVLDTQ----------EEERGRVARELHDSISQ 277 Query: 405 SLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRP 463 L ++ + + + ++E + + + LN + ++R + R QL + GL P Sbjct: 278 LLVGIRYALELARRRVQTGDARAQENIEKGIDGLNGAIQEVRRISRDLRPGQLDDLGLGP 337 Query: 464 ALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTV 523 A++ EE++ + G ++ + + I L +IA+EAL+N +H+QA+EV + + Sbjct: 338 AIQDLAEEFTKRTGIRAEMKTVVFRNRLDPEAKIALYRIAQEALTNIERHAQATEVHLDL 397 Query: 524 AQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + L V DNG G+ + + G+ M++R + L G +V E GT + T Sbjct: 398 FGHQTGATLRVADNGRGLANVSRGAGGLGLRNMQERVEQLDGTLQVFSSE-AGTRIDATV 456 Query: 584 I 584 Sbjct: 457 P 457 >UniRef50_C6J152 Histidine kinase dimerization and phosphoacceptor region n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J152_9BACL Length = 360 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 109/260 (41%), Gaps = 8/260 (3%) Query: 337 SHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIAR 396 + G L L + +Q + L + E+ + ++EER +AR Sbjct: 100 GEDELGRLAEQLERIGKRWEEQVSSLQRLSTH------NAQLAEQARVSAIVEERQRLAR 153 Query: 397 ELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ- 455 ELHD+++Q L + M + + + + ++ + I + + +++R LL R Sbjct: 154 ELHDAVSQQLFAISMTATAVGRTLEKDFDKAQRQVELIEEMASVAQSEMRALLLHLRPVY 213 Query: 456 LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQ 515 L L L +E K + L+ + HL +I +EA+SN L+H++ Sbjct: 214 LEGKELSQGLSDLVKELKTKVPMDLTLEID-EDLNLGKGIENHLFRIIQEAMSNTLRHAK 272 Query: 516 ASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESG 575 A ++ + + VK+T++DNG G + + YG+ M++R + G + Sbjct: 273 ADKMEIRIHHRGEAVKVTLRDNGIGFELDDKKQASYGLSTMQERIHEIGGSIQFITAPGK 332 Query: 576 GTEVVVTFIPEKTFTDVQGD 595 GT + ++ + +G Sbjct: 333 GTRIEISVPLIHEESGDEGS 352 >UniRef50_A6WW19 Integral membrane sensor signal transduction histidine kinase n=46 Tax=Rhizobiales RepID=A6WW19_OCHA4 Length = 485 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 59/236 (25%), Positives = 110/236 (46%), Gaps = 6/236 (2%) Query: 365 LVEQLTATLALDRHQERQQQLI--VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA 422 L+ +A ++ +E Q++I EERA +ARELHD I+Q+L ++ + Q Sbjct: 249 LLNLRERRMADNKLKELAQRIIDTQEEERARLARELHDGISQNLVGVRYAIDLASRQVRM 308 Query: 423 LPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVK 481 + + + + LN + ++R L R + L + GL AL+A CE +S + G + Sbjct: 309 DSGGAPLAIEKASDALNGAIKEVRRLSHDLRPRILDDLGLTVALKALCEHFSERTGIETQ 368 Query: 482 LDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV 541 L+ + + L ++ +EAL+N +HS AS+V + + + +V +TV D+G G Sbjct: 369 LEASGLNETLKPEASTALYRVVQEALTNVERHSGASQVSIRLWGSGGKVTMTVADDGNGF 428 Query: 542 PENAIRS--NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGD 595 ++ + G+ M++R G V GT++ T + + Sbjct: 429 TARDLKDQLSGLGLRNMQERMAHFGGVLLVETGAD-GTQLTARLPKSATERKREPE 483 >UniRef50_A6GSY8 Sensory transduction histidine kinase n=1 Tax=Limnobacter sp. MED105 RepID=A6GSY8_9BURK Length = 512 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 63/256 (24%), Positives = 115/256 (44%), Gaps = 7/256 (2%) Query: 346 ATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQER----QQQLIVMEERATIARELHDS 401 P+G D L + +Q L + + R + + +ER IARE+HD Sbjct: 259 VAKPRGNVFVWDGVLLDISDRKQAEERLQNAQTELRLVTTEFEKRREQERGAIAREIHDD 318 Query: 402 IAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGL 461 + SL+ +K V+ L A + +E L + + A + + R + + GL Sbjct: 319 MGGSLTKLKADVAWLNKNLTAD-SAIQEKLDDMLELIEHLLASSQRIAKDLRPGILDYGL 377 Query: 462 RPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVV 521 PALE ++ + + + S Q+ L +I +EAL+N +KH+QA+ V V Sbjct: 378 IPALEWQMNDFQKRTQIEGTFQCNVEELDLDSEQSTALFRILQEALTNIVKHAQATRVDV 437 Query: 522 TVAQNDNQVKLTVQDNGCGVP-ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVV 580 + ++++ L ++DNG G+ + ++ +G+ M++R + G V GT V+ Sbjct: 438 ELFVTESELTLEIRDNGRGIENTDKLKETSFGLRGMQERVAAFEGWVDVSGSLGSGTTVM 497 Query: 581 VTFIPEKTFTDVQGDT 596 V+ IP T G+ Sbjct: 498 VS-IPRSIQTGEAGND 512 >UniRef50_B4CV46 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV46_9BACT Length = 692 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 5/224 (2%) Query: 365 LVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP 424 + + +E +Q + EER IARE HD+ Q L + + + Q + A P Sbjct: 464 FALRRRVAAQTETIREHIEQQTLQEERMRIAREFHDTFEQHLVGLGLMLETAQAEI-ADP 522 Query: 425 ESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLD 483 + +RELL + + A+ R + R L + + + ++++ Sbjct: 523 QRARELLREAAEMTRHTRAEARHAIWELRTGALASVDVVSLIHDELSSSAQAARLHLRVE 582 Query: 484 YQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPE 543 + R +P+ HLL+I +E+ +NALKH++A V V + ++ L V DNG G Sbjct: 583 VEGNRRPLPAVVQNHLLRIVQESFTNALKHARAECVTVHLGFGVEEICLRVVDNGAGFDP 642 Query: 544 NAIR---SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 +A+ +G+ MR+RA ++G+ + GTEV V Sbjct: 643 DAVTPHDGGGFGLAGMRERALRMKGNFAIASAPGRGTEVQVRIP 686 >UniRef50_C6WV68 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WV68_METML Length = 499 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 62/254 (24%), Positives = 122/254 (48%), Gaps = 12/254 (4%) Query: 334 LADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERAT 393 LAD Q+ ++ + Q ++ + Q+ L QLTA H + ++L ER Sbjct: 257 LADGVVQWVGMMINITQSKNEKLELQESRHELA-QLTA------HMNQIKEL----ERTR 305 Query: 394 IARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFR 453 IARE+HD + +L+ +K+ ++ + + S E + + ++ ++ + ++ + R Sbjct: 306 IAREIHDDLGGNLTAIKIGLTSIINRIATGLPVSFEQAKGLESIVDNTFEAIHKISSDLR 365 Query: 454 LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKH 513 + + G+ ALE +E+ + G +V QAI L +I +E++SN KH Sbjct: 366 PNILDLGIVAALEWQAKEFEKQVGVTCTFTTNQADIVVTPDQAITLFRICQESMSNIAKH 425 Query: 514 SQASEVVVTVAQNDNQVKLTVQDNGCGVP-ENAIRSNHYGMIIMRDRAQSLRGDCRVRRR 572 + AS V V + + ++ + + DNG G+ + + N +G+ M++R +L G + + Sbjct: 426 ANASAVHVDLNLHYGEIIMKISDNGIGINTADTYKPNSFGLRGMQERVAALYGSFDIEQL 485 Query: 573 ESGGTEVVVTFIPE 586 GT + VT E Sbjct: 486 AGQGTVIAVTLPIE 499 >UniRef50_B8G136 Sensor protein n=1 Tax=Desulfitobacterium hafniense DCB-2 RepID=B8G136_DESHD Length = 497 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 7/264 (2%) Query: 326 RGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQL 385 RG + + G+L Q + + + + L+ +L + + + Sbjct: 217 RGNLTVQGTVRAEDEIGVLTQAFNQMINSLSETNRERENLLAKLKENEGMRIQLLEKVMI 276 Query: 386 IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQL 445 EER I+RELHD +Q+L+ + + + L+ + S E ++R ++ + ++ Sbjct: 277 AQEEERKRISRELHDETSQALTSLMVGLKILE--AETSISSVGEKAQEMRQVVSQTLDEV 334 Query: 446 RELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQL-PPRLVPSHQAIHLLQIA 503 + R L + GL PAL +Y K+G V + + + + +I Sbjct: 335 HHMARELRPSVLDDMGLIPALGRYIRDYQQKYGTEVDFHASGFEGQRLTASAEVAFYRII 394 Query: 504 REALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI---RSNHYGMIIMRDRA 560 +EAL+N K++QA V V + ++ V V+D+G G + S+ G+ MR+RA Sbjct: 395 QEALTNVAKYAQADSVSVVLDWREHWVTAIVEDDGVGFDTENVTNEPSHGLGLFGMRERA 454 Query: 561 QSLRGDCRVRRRESGGTEVVVTFI 584 L G + + GT V + Sbjct: 455 ALLGGSVNIESKLGTGTTVFIKIP 478 Score = 56.1 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 75/197 (38%), Gaps = 16/197 (8%) Query: 149 IETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNE 208 + T+V A+F++ L + + L L +P R+L+A+ V+ + T + + +E Sbjct: 172 VVTMVWSFVATALFVSALGITAAVILTKVLTRPVRELVALTQKVARGNLTVQGTVRAEDE 231 Query: 209 MAMLGTALNNMSAELAESYAVLEQ-------------RVQEK--TAGLEHKNQILSFLWQ 253 + +L A N M L+E+ E ++ EK A E + +I L Sbjct: 232 IGVLTQAFNQMINSLSETNRERENLLAKLKENEGMRIQLLEKVMIAQEEERKRISRELHD 291 Query: 254 -ANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKG 312 ++ L S + L + +++ V T DE +H +P + D Sbjct: 292 ETSQALTSLMVGLKILEAETSISSVGEKAQEMRQVVSQTLDEVHHMARELRPSVLDDMGL 351 Query: 313 CQLCPRGVLPVGDRGTT 329 R + + T Sbjct: 352 IPALGRYIRDYQQKYGT 368 >UniRef50_UPI0001B54FA0 histidine kinase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B54FA0 Length = 423 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 7/234 (2%) Query: 348 LPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLS 407 L+ +L L E + + +Q V++ER +ARE+HD++AQ L+ Sbjct: 184 RRTNEKLAQTNARLETALTENAALH---AQLLTQARQAGVLDERQRMAREIHDTVAQGLT 240 Query: 408 CMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALE 466 + Q+ +A + L+ + S + R + R + L + L AL Sbjct: 241 GIVTQLQAADRATEA--ADRQRHLAHVHTLAKDSLTEARRAVQALRPEPLADSHLPEALA 298 Query: 467 ASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN 526 S G V D + R + + L ++A+EAL+NA KH++A+ + +T+ Sbjct: 299 GLANRVSDTSGTKVTADVEGDARPLLPELEVTLYRVAQEALANAEKHARANRIGITLTYT 358 Query: 527 DNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 + + L ++D+G G P + +G+ MR R Q + G + GT V Sbjct: 359 SDLIMLDIRDDGRGFAPGDRGDGTGFGLEAMRQRVQRVAGSLTIESARGEGTVV 412 >UniRef50_C7MZN7 PAS domain S-box n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MZN7_SACVD Length = 547 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 79/392 (20%), Positives = 149/392 (38%), Gaps = 49/392 (12%) Query: 242 EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIE----------LRVYDT 291 H+ + ++ + + +L S L L + + + L ++ LR+ + Sbjct: 125 RHRQRRVAAIARTAAKLASDRSLTGILDALASEVLKTDALAGVQILTREESGGGLRIIGS 184 Query: 292 DDEENHQEFTCQPDMTCDDKGCQLCPRGVL---------------------PVGDRGTTL 330 + +F + C+ G L + P+ D + L Sbjct: 185 AGFRHRPDFFDRLVEVCERGGTLLMLEAIETRKPVIVPNRWELIRNDPTWEPLHDYLSEL 244 Query: 331 KW------RLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQ 384 KW L G+L A G+ + + + + +Q + + + + Sbjct: 245 KWGSFASIPLIIRGHAAGVLNAFFAVGQSVGQRTMEFLTAMADQAAIAVDYAKFMQHARD 304 Query: 385 LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDAL----PESSRELLSQIRNELNA 440 + +ER +AR+LHDSI Q + + MQ +Q+ +S R + +I Sbjct: 305 VARRDERQRLARDLHDSIVQQVFSISMQAKSMQVLAQRDESVSAQSVRRIADEISLLSQT 364 Query: 441 SWAQLRELLTTFRLQLTEP--GLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIH 498 LR ++ R + GL A+ A + + + G L + A Sbjct: 365 VLTDLRAMVHELRPAPSAELGGLEEAVRALVDSTTNRTGLRFSLMIGRGIEHIKGELAED 424 Query: 499 LLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP------ENAIRSNHYG 552 + EA+ N +KH+ AS VVV +A ++++ TV D+G G+ + + ++ YG Sbjct: 425 AYRTVSEAIHNVVKHAAASRVVVRLAIRGDRLEATVSDDGRGIDAAKGNTDRSGPAHGYG 484 Query: 553 MIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 + MR+RAQ G VR R GT V ++ Sbjct: 485 LATMRERAQRWGGTLTVRPRRPTGTIVRLSMP 516 >UniRef50_Q47FQ9 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, dimerization and phosphoacceptor region n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FQ9_DECAR Length = 373 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 52/234 (22%), Positives = 111/234 (47%), Gaps = 5/234 (2%) Query: 352 RHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKM 411 ++ +QL + ++L A+ + Q + EER IARELHD + Q+L+ +++ Sbjct: 137 ERVAERTEQLRQS-SDELRASRERLQELAAFLQSVREEERTAIARELHDELGQALTALRI 195 Query: 412 QVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTE-PGLRPALEASCE 470 ++ + Q L + + + +R + R + + GL A+E E Sbjct: 196 DLAWINRQCKTLGPEVQARADASCAIVERTIDAVRRISEGLRPGMLDVLGLTAAIEYLVE 255 Query: 471 EYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQV 530 +++ + P L + +I + ++ +EAL+N ++H+ A+ V +T++Q++N + Sbjct: 256 QFAKRNDIPCYLTSDRDEFAIDDRVSIAVFRLIQEALTNVVRHASATRVDITLSQDNNTI 315 Query: 531 KLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 + ++DNG G+ + +G++ MR+R L G + GT ++ F Sbjct: 316 CVDIRDNGIGLATGEPKQG-FGLLGMRERVTMLGGTIDIDGS--RGTRILARFP 366 >UniRef50_Q0S8Z4 Sensor kinase, two-component system n=2 Tax=Rhodococcus RepID=Q0S8Z4_RHOSR Length = 647 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 11/265 (4%) Query: 327 GTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLAL----DRHQERQ 382 G L G ++ T P G L ++ + L +TA L + + QE + Sbjct: 383 GHAESVELVHRGAVLGTMVVTAPPGESLGARTRRSLTELSAVVTAGLVVLQSAENLQEAR 442 Query: 383 QQLI--VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNA 440 ++L +EER TI RELHD + SL+ +++ + + + P ++ EL+ ++ +L+ Sbjct: 443 RRLASVRLEERQTIRRELHDGLGPSLAGIRLGLQGARNLLGSDPVAAAELIDALQEQLDH 502 Query: 441 SWAQLRELLTT-FRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHL 499 +R+L + F L E GL PAL ++ GF +++ PPR + + + + Sbjct: 503 QVEGVRQLSRSMFPPVLDELGLVPALHELAAN-QSRSGFQLRVQADPPPR-LGAEISAAV 560 Query: 500 LQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDR 559 I EA++NA +HS A V + + + D+GCG R G MR+R Sbjct: 561 YGIVVEAVTNARRHSGADGCRVDATFAREMLTVVIHDDGCGFDP--ARGGGVGTRSMRER 618 Query: 560 AQSLRGDCRVRRRESGGTEVVVTFI 584 A L G + GT V Sbjct: 619 AHELGGTLHIESGRPTGTVVTARLP 643 >UniRef50_Q67L27 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67L27_SYMTH Length = 536 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 82/386 (21%), Positives = 145/386 (37%), Gaps = 30/386 (7%) Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ 298 + + Q + L R + S +RL +L L L + D EE Sbjct: 146 REAQRRRQQIEGLAAMAREIGSLREQPQRLGGLLERACRLLDLDLAAWGMLDEYREELVW 205 Query: 299 --------EFTCQPDMTCDD---------------KGCQLCPRGVLPVGDRGTTLKWRLA 335 + P T D G + P+ R T Sbjct: 206 NAAHGPGADLLLGPLRTVGDSPLVRTLMTGRIYRYPGAGRPDPHLAPLPLRSFT-AIPYR 264 Query: 336 DSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIA 395 G+LL + L D +L + L L+ + Q L V+EER +A Sbjct: 265 LGPRSQGVLLGASRRPGALVDDDLRLFNHLGAYLSTAAENAQLLRDMQHLAVLEERQRLA 324 Query: 396 RELHDSIAQSLSCMKMQVSCLQMQGDALP-ESSRELLSQIRNELNASWAQLRELLTTFRL 454 E+HD I Q L+ + M++ ++ ++ E ++ +R + ++ ++R L R Sbjct: 325 GEIHDHIGQVLTFLGMRLHVVERALAQDDLATAAEEVAGLRGVVASAHEEIRASLYDLRN 384 Query: 455 QLTEPG-LRPALEASCEEYSAKFGFPVKLDY-QLPPRLVPSHQAIHLLQIAREALSNALK 512 L + ++A+ G V+++ P ++P L +I +EAL+NA + Sbjct: 385 DAPARSPLMDRWRQLLDAFAARTGIAVRIETPHRPMLVLPPTTEAQLTRILQEALANAQQ 444 Query: 513 HSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR-SNHYGMIIMRDRAQSLRGDCRVRR 571 HS AS V V + +T+ D+GCG + +H+G+ +MR+RAQ++ + Sbjct: 445 HSGASTVTVQARVERATLYITIADDGCGFDPSVPPDPHHFGLALMRERAQAIGARLHIES 504 Query: 572 RESGGTEVVV--TFIPEKTFTDVQGD 595 GT + + P K Q Sbjct: 505 ARGRGTRISLEMPLPPRKEMEHEQEP 530 >UniRef50_C6CVS1 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVS1_PAESJ Length = 338 Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 2/206 (0%) Query: 380 ERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELN 439 E+ + V+EER +ARELHD+++Q L + M + + + E ++ + I + Sbjct: 126 EKVKFSAVIEERQRLARELHDAVSQQLFAISMTATAVSRTIERDWERAKRQVQLIEEMAS 185 Query: 440 ASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIH 498 + +++R LL R L L AL A +E K + LD + H Sbjct: 186 VAQSEMRALLLHLRPVHLDGKNLAAALTALVDELKQKVPMTIDLDVD-DSITMKPETEDH 244 Query: 499 LLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRD 558 L +IA+EALSN L+HS+A + + + + +V++ ++D G G A + YG++ M + Sbjct: 245 LFRIAQEALSNTLRHSKAESMEIKLHRKGPEVRMLLKDTGIGFDLEAKKQTSYGLLTMEE 304 Query: 559 RAQSLRGDCRVRRRESGGTEVVVTFI 584 R L G + + GT + + Sbjct: 305 RVNELGGYLHMISKPGEGTSIDIRVP 330 >UniRef50_B2TG29 PAS/PAC sensor signal transduction histidine kinase n=2 Tax=Burkholderia RepID=B2TG29_BURPP Length = 370 Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 16/262 (6%) Query: 338 HTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARE 397 H + G LL R ++ +++ ++ L E +A AL + E+ IARE Sbjct: 118 HDEQGDLLGFAKITRDMT--ERRRLEDL-EHASAASALVQQ-------ARENEQRRIARE 167 Query: 398 LHDSIAQSLSCMKMQVSCLQMQ-GDALPESSRELLSQIRNE---LNASWAQLRELLTTFR 453 LHD + Q ++ +KM ++ + + E+ R L +R L+A +R + R Sbjct: 168 LHDDLGQQITALKMTLALHETELARHFSEAGRARLGSVREMADQLDAMATSMRRIAADLR 227 Query: 454 LQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALK 512 L + GL ALE E + ++G PV+ + + AI L ++ +EAL+N + Sbjct: 228 PPMLDDLGLEAALEWMTEGFEQRYGVPVRCEISPDVLCLNDLAAISLYRVIQEALTNVAR 287 Query: 513 HSQASEVVVTVAQNDNQVKLTVQDNGCGVP-ENAIRSNHYGMIIMRDRAQSLRGDCRVRR 571 H++A+EV VT++ +D L + D+G G+P A R++ +G++ MR+R L G V Sbjct: 288 HARANEVFVTLSADDRHYHLQIHDDGVGLPKAPAPRADCFGLLGMRERISQLGGVLSVDS 347 Query: 572 RESGGTEVVVTFIPEKTFTDVQ 593 G + + + Q Sbjct: 348 IPGRGVTITARVPLARVLVESQ 369 >UniRef50_B2GCM4 Two-component sensor histidine kinase n=8 Tax=Lactobacillus RepID=B2GCM4_LACF3 Length = 355 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 63/257 (24%), Positives = 116/257 (45%), Gaps = 5/257 (1%) Query: 344 LLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIA 403 +L+ Q L + +D +A R + +ER I+++LHDSIA Sbjct: 100 VLSPTDQVYALELKSRATLDRATLDRATQVAQQRMLNQYVNRAYEDERKRISQDLHDSIA 159 Query: 404 QSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLR 462 Q + M V L+ + PE +++ + I +L+ + +++E+ R L GL Sbjct: 160 QGVYSAIMGVRRLKSEQLDEPER-QQVSTMIETQLDDTLREVKEMALDIRPSVLDSFGLV 218 Query: 463 PALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT 522 A+ A + + G + + + + + L +I +EA++NALKH+ +E+ V Sbjct: 219 AAIRALAKRLTENSGVIIDVIGKADTSGLTTDVQSVLYRITQEAINNALKHANPTEITVM 278 Query: 523 VAQNDNQVKLTVQDNGCGVPENAIR---SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 + + + + L V DNGCG A R + G++ M +R ++L G + GT V Sbjct: 279 LVAHAHYISLEVIDNGCGFDFQAHRGFNGHSLGLMNMSERVKALNGSFMIDSAPGQGTTV 338 Query: 580 VVTFIPEKTFTDVQGDT 596 V F + V G++ Sbjct: 339 TVKFPVIEINHQVNGES 355 >UniRef50_Q4ZMH3 PAS n=6 Tax=Pseudomonas RepID=Q4ZMH3_PSEU2 Length = 670 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 74/382 (19%), Positives = 154/382 (40%), Gaps = 28/382 (7%) Query: 218 NMSAELAESYAVLEQRVQEKTA------GLEHKNQILSFLWQANRRLHSRAPLCERLSPV 271 + EL + L +RV+E+ A ++ + ++ +R ++ L Sbjct: 309 ALEQELLAAREELARRVEEEEALRLAQFSIDQSTVGILWVNWDSRVRYANRAAESMLGYA 368 Query: 272 LNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLK 331 + L+ D + + + C +LPV + L+ Sbjct: 369 PGQVVERPLIDFEPGLHMDRWLNLWKSARSSEDSPQVFETHCLRADGSLLPVDVSLSFLR 428 Query: 332 WRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEER 391 +R +Y ++ T R +HD L+ L L + + EE+ Sbjct: 429 FR----DAEYLVVFLTDVSERRRAHD---LLRELSAHL--------------ESVREEEK 467 Query: 392 ATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTT 451 A IARE+HD + Q L+ +K++ S ++ L E L ++ + + +R++ T Sbjct: 468 AHIAREVHDELGQMLTVLKLETSMCELAYADLDPGLSERLDSMKRLIAQLFQLVRDVATA 527 Query: 452 FRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNAL 511 R + + G+ A+E + A+ P + + +A + +I +EAL+N + Sbjct: 528 LRPPILDAGIASAIEWQARRFEARTQIPCLVQVPDNLPALSDARATGMFRILQEALTNVM 587 Query: 512 KHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRR 571 +H++A V +++ D + +++ D+G G + R+ +G++ MR+R L G + Sbjct: 588 RHARAHTVEISLTLQDGMMCMSIADDGQGFVIESGRAVSFGLVGMRERVLMLGGRLELDS 647 Query: 572 RESGGTEVVVTFIPEKTFTDVQ 593 GT + +IP T + Sbjct: 648 EVGEGTTLR-AYIPLDTLAQER 668 >UniRef50_UPI0001B502C8 two-component sensor, putative n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C8 Length = 556 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 110/272 (40%), Gaps = 11/272 (4%) Query: 326 RGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQL 385 RG W L T G + P GR +++ + + DR + ++ Sbjct: 286 RGAVAAWPLLRETTVIGAMCCHFPAGRRPGETDMTVLEVIAGHAACAVEEDRQRAAARET 345 Query: 386 IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPE---------SSRELLSQIRN 436 V EER ++RELHDS++Q+L + + + + E + IR Sbjct: 346 AVREERRRVSRELHDSVSQALYGIALGARTARELLERDLAEPTGVAELAQLAEPIEYIRR 405 Query: 437 ELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQ 495 + + A+ R LL R + L GL AL E ++G + P P Sbjct: 406 LADVAIAETRTLLCQLRPESLEAEGLVAALTQHVETLRDRYGITAEATLGSEPETTPEA- 464 Query: 496 AIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMII 555 L +IA+E+L N KHS+A V + + V LTV D+G G H G++ Sbjct: 465 KHALYRIAQESLHNIAKHSRARNVTLHLLSGPGTVTLTVADDGVGFDSQGTFPGHLGLLS 524 Query: 556 MRDRAQSLRGDCRVRRRESGGTEVVVTFIPEK 587 MR+RA+ + G V R G+ + T E Sbjct: 525 MRERAREVGGTLLVDSRPGQGSRIRATVPAEP 556 >UniRef50_A1AUQ4 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUQ4_PELPD Length = 489 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 74/324 (22%), Positives = 146/324 (45%), Gaps = 11/324 (3%) Query: 263 PLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLP 322 C R + + L ++ + ++ + E + ++ + Sbjct: 170 INCNRAAEAMLELPREEIIGRHQTVLHPPEMAE----HFAAQFRRTVAQHREVDNAEAIV 225 Query: 323 VGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQ 382 V G + + S T+ G + R +S ++ + + LVE AL H + Sbjct: 226 VSKSGRRIPVHIKHSVTRVGEMSIMQGLFRDIS-ERVRAEEQLVELNQKLRALSDHLQTV 284 Query: 383 QQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASW 442 Q+ ER +AR++HD I QSL+ +K+ + + + A + +E ++++R + Sbjct: 285 QER----ERLAMARDIHDEIGQSLTVLKLDLEWIAHRLPAKESAVQERVNEMRWNIEQLT 340 Query: 443 AQLRELLTTFRLQLTE-PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQ 501 + ++ + R L + GL A++ E+S + G + + A +++ Sbjct: 341 SAVQRIAADLRPPLLDSLGLAAAIDWHVAEFSRRSGIECFVMLNEEVDPLEPQLATAVMR 400 Query: 502 IAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRA 560 I +E L+N L+H++A+EV V++ + D Q+ L + DNG G+ PE YG++ M++RA Sbjct: 401 IVQEGLTNVLRHARATEVSVSLCKRDGQLVLEIGDNGRGIRPEEIESPQAYGLMGMQERA 460 Query: 561 QSLRGDCRVRRRESGGTEVVVTFI 584 + RG+ V E GGT + VT Sbjct: 461 RICRGELTVGGAEGGGTLLRVTVP 484 >UniRef50_D2B2V1 Histidine kinase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B2V1_STRRD Length = 687 Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats. Identities = 75/272 (27%), Positives = 130/272 (47%), Gaps = 15/272 (5%) Query: 319 GVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRH 378 G L +G + L W T +L+A GR + + L + T L R Sbjct: 430 GELRLGTQEVPLLWHAERVGT---LLVAGAWPGREPLAVLARHLAELAHAVRLTADLHRS 486 Query: 379 QERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNEL 438 +ER + E R + RELHD + +L+ + + + + + D P + +LL ++R E+ Sbjct: 487 RERIRTTRDEE-RRRLGRELHDGLGPALTSVTLTLDEARRRLDTDPRAVEKLLVRVREEM 545 Query: 439 NASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAI 497 A+ A +REL+ R L + GL AL AS E + + +P+ + Sbjct: 546 TATIASVRELVYGLRPPALDDLGLEGALRASAGETA--------VTVDGALDDLPAAVEV 597 Query: 498 HLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMR 557 +IA+EAL+NA +H+ + V++ + + ++++ V D+G G+PE+ + G+ MR Sbjct: 598 AAYRIAQEALTNARRHAGPATVLIRLRRLPGELRVEVADDGVGLPES--PAAGVGLTSMR 655 Query: 558 DRAQSLRGDCRVRRRESGGTEVVVTFIPEKTF 589 +RA + G C + RR GGTEV E+ Sbjct: 656 ERAAEVGGSCVIGRRPGGGTEVTARLPTEEAT 687 >UniRef50_C0Z627 Two-component sensor histidine kinase n=3 Tax=Bacillales RepID=C0Z627_BREBN Length = 382 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 9/259 (3%) Query: 337 SHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIAR 396 + G L + + +Q + L A E+ + V EER +AR Sbjct: 132 GVDEVGELGWQINRLASQWEEQVASLQRLSNHNAA------LAEQLKHAAVTEERQRLAR 185 Query: 397 ELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ- 455 ELHD+++Q L + M + ++ + P+ + + + + A+ A++R LL R Sbjct: 186 ELHDAVSQQLFAIAMTTAAMKRLVEKNPQRAAQQIELVEEMAAAAQAEMRALLLHLRPAT 245 Query: 456 LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQ 515 L L+ A+ +E + K + + + +PS HL +I +E+LSN L+H++ Sbjct: 246 LQNKSLKEAILELLDELTRKNTMQLTWEIE-DVEGLPSGIEDHLFRILQESLSNTLRHAR 304 Query: 516 ASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESG 575 A+++ V + QV+L V D+G G + + YG+ M++R + G + Sbjct: 305 ATQIAVKLFTLQEQVRLRVTDDGVGFDPDGEKMTSYGLRSMQERVAEVGGSMEIYSAIGK 364 Query: 576 GTEVVVTFIPEKTFTDVQG 594 GT++ V IP T+ +G Sbjct: 365 GTQIEVR-IPIVLQTEREG 382 Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 86/253 (33%), Gaps = 17/253 (6%) Query: 151 TVVLVHRVMAVFMALLLVFTIIWLRARLLQP-WRQLLAMASAVSHRDFTQRANISGRNEM 209 + L V+++ +L+ I ++ LL+ L A + + R G +E+ Sbjct: 77 LIQLAAFVVSLPAGVLVALIISYIIGNLLKKRLSVLWEAAMKLGRGMLSYRVPELGVDEV 136 Query: 210 AMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQIL-SFLWQANRRLHSRAPLCERL 268 LG +N ++++ E A L++ L + N L L A + E Sbjct: 137 GELGWQINRLASQWEEQVASLQR--------LSNHNAALAEQLKHAAVTEERQRLARELH 188 Query: 269 SPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKG------CQLCPRGVLP 322 V L + + R+ + + + Q+ +M + L P + Sbjct: 189 DAVSQQLFAIAMTTAAMKRLVEKNPQRAAQQIELVEEMAAAAQAEMRALLLHLRPATLQN 248 Query: 323 VGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHD-QQQLVDTLVEQLTATLALDRHQER 381 + L+ + L + L + L L E L+ TL R + Sbjct: 249 KSLKEAILELLDELTRKNTMQLTWEIEDVEGLPSGIEDHLFRILQESLSNTLRHARATQI 308 Query: 382 QQQLIVMEERATI 394 +L ++E+ + Sbjct: 309 AVKLFTLQEQVRL 321 >UniRef50_UPI00016987BE Periplasmic Sensor Signal Transduction Histidine Kinase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016987BE Length = 263 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 88/241 (36%), Positives = 141/241 (58%), Gaps = 5/241 (2%) Query: 348 LPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLS 407 + L QQ+L++T+ + + L + + + L ++EER+ IARELHDS+AQSLS Sbjct: 2 FNVEQELEECQQRLLETVASHIAMAINLSQRVSQNRMLSLLEERSVIARELHDSLAQSLS 61 Query: 408 CMKMQVSCLQMQGDALPESSRELL--SQIRNELNASWAQLRELLTTFRLQLTEPGLRPAL 465 +K+QVS L+ LL +R+ LN ++ QLRELLTTFRL+++E GL AL Sbjct: 62 YLKIQVSRLEKAVSEEQAKDDLLLISGVLRSALNGAYRQLRELLTTFRLRMSEAGLGAAL 121 Query: 466 EASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ 525 + + EY + G ++L ++ + IH++QI REALSN ++H+ A+ +V + Sbjct: 122 DETVREYRERGGLEIELIDRIANCRFSPNAEIHVIQIIREALSNVIRHANATRALVKIEC 181 Query: 526 N-DNQVKLTVQDNGC--GVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVT 582 + D V + V+D+G G+ E HYG+ IM++RA L + + ESGGT V+++ Sbjct: 182 DMDGIVTILVEDDGVGIGIDEEGDMMQHYGLPIMQERANWLGAELMINEPESGGTRVLLS 241 Query: 583 F 583 F Sbjct: 242 F 242 >UniRef50_A1HRV6 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRV6_9FIRM Length = 473 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 6/254 (2%) Query: 335 ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATI 394 A + + G+L Q ++++ + L+E+L A+ ++ I +ER I Sbjct: 214 AKTGDEVGLLAVAFNQMVAGLKEKEKENNLLLEELRHKEAMRAFLIKKLFTIQEDERKRI 273 Query: 395 ARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL 454 +RELHD Q L+ + + L + + +ELL + R+ + LR++ R Sbjct: 274 SRELHDETGQLLASLLAYMKLLLSKL--TDQQQKELLQEARDVAVNALEGLRKIAVELRP 331 Query: 455 Q-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKH 513 L + G+ A++ + +S + G V + ++ L +I +E+L+N KH Sbjct: 332 PVLDDLGVTAAMQKYIQTFSGQQGLKVHFSVPEKQLELDPEVSLALYRILQESLTNIAKH 391 Query: 514 SQASEVVVTVAQNDNQVKLTVQDNGCGVP---ENAIRSNHYGMIIMRDRAQSLRGDCRVR 570 ++AS V V ++ V+L V+D+G G+ E+A + N G+ M++RA+ L G + Sbjct: 392 ARASNVYVCLSAAGQTVRLVVRDDGLGIDGGLESAGQKNRLGIYGMKERAELLGGSLDIH 451 Query: 571 RRESGGTEVVVTFI 584 GT V+ T Sbjct: 452 SENGCGTVVIATLP 465 Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 37/88 (42%) Query: 138 VSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDF 197 V + +T+ + + + M ++ F WL + +++P R L + + + Sbjct: 149 VGMSENSTQQLLNKTNRNFFIGIIMMCVIATFLATWLTSLIIRPIRSLADAVAEIQSGNL 208 Query: 198 TQRANISGRNEMAMLGTALNNMSAELAE 225 + R +E+ +L A N M A L E Sbjct: 209 SARVEAKTGDEVGLLAVAFNQMVAGLKE 236 >UniRef50_C7QZV7 Histidine kinase n=3 Tax=Micrococcineae RepID=C7QZV7_JONDD Length = 422 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 70/240 (29%), Positives = 107/240 (44%), Gaps = 15/240 (6%) Query: 358 QQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ 417 ++ + + AL+ Q+RQ++L + ER IARE+HD +A SLS M Q + Sbjct: 179 RRARIAHIRALSDRNRALESEQDRQKELGAVAERTRIAREMHDIVAHSLSVMIAQADGGR 238 Query: 418 MQGDALPESSRELLSQIRNELNASWAQLRELLTTFR---------LQLTEPGLRPA---L 465 P+ + L+ I A+ A +R LL R L E +PA L Sbjct: 239 YAAATNPDLAATALTTIAETGRAALADMRRLLGVLREGDSPPGAGTSLGELTPQPAEESL 298 Query: 466 EASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQAS-EVVVTVA 524 E+ + A G V L PR +P + + ++ +EAL+N LKH+ V V + Sbjct: 299 ESLVNQIRA-SGVRVSLIRMGQPRTLPPGAGLTVYRVCQEALTNILKHAGPDPTVTVHIT 357 Query: 525 QNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 + LT++D+G GV A G++ MR+RA GD R GG V +T Sbjct: 358 WAATSLTLTIEDDGRGV-AAANDGQGMGLLGMRERAALFGGDVTTGPRPGGGFRVSLTLP 416 >UniRef50_B5JIM7 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JIM7_9BACT Length = 1027 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 122/257 (47%), Gaps = 9/257 (3%) Query: 346 ATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQS 405 A + + D ++LVD E+L T+ + E + + ER +A E+HDS+ Q Sbjct: 776 AGFRRAKRKHEDLEKLVDQRTEELRDTM--QKLTEEARNSATLAERNRLAGEIHDSLQQG 833 Query: 406 LSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLT-EPGLRPA 464 LS + +Q+ ++ D L + R LS R ++ + ++++ + L + L A Sbjct: 834 LSGLALQLD-ATLKHDNLGPNLRNRLSVARRMVSFTRQEVQQAVWDLESPLLQDESLAEA 892 Query: 465 LEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVA 524 L + A ++++ R +PS H+L+IA+E ++NA++HS+A ++ V++ Sbjct: 893 LRNIAQLLGASSA-KLRVETSGDQREIPSRTKHHILRIAQEVITNAIRHSEARQITVSLT 951 Query: 525 QNDNQVKLTVQDNGCGVPEN---AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 +D V LTV D+G G + A H+G+ +R RA + G + GT + + Sbjct: 952 FSDTIVTLTVSDDGQGFDTSEVFAEGLGHFGLRGLRARADKIDGSLEIHSELGQGTTISI 1011 Query: 582 TFIPEKTFTDVQGDTHE 598 +P + HE Sbjct: 1012 E-VPLLNEAENNHQNHE 1027 >UniRef50_UPI0001B561AB two-component system sensor kinase n=1 Tax=Streptomyces sp. C RepID=UPI0001B561AB Length = 414 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 71/295 (24%), Positives = 124/295 (42%), Gaps = 19/295 (6%) Query: 302 CQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQL 361 + + G L VL G G + ++ +GR +Q+ Sbjct: 98 SRCPLRMSAPGAGLAAATVLFSGFAGGLSPLLVLGQAVIVPVICLVFGRGR------RQV 151 Query: 362 VDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD 421 +E + AL Q + + V++ER IARELHD +A +S + +Q Sbjct: 152 ALQNLELVRLAEALAHEQRERARRAVVDERIHIARELHDVVAHHMSVISVQAGLADYVFA 211 Query: 422 ALPESSRELLSQIRNELNASWAQLRELLTTFRLQL--------TEPGLRPALEASCEEYS 473 + P ++R L+ I + +LR LLT R+ L G P L EE + Sbjct: 212 SDPATARAALTTIAGASRDALGELRRLLTVLRVDLGREDDPSSAPLGPLPELSR-VEELA 270 Query: 474 AK---FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQV 530 + G V + PR + + ++ +EAL+N +KH++ + V V +A +++ Sbjct: 271 RRVGAAGVTVDIRTTGVPRKLDPGLEVCAYRVLQEALTNVVKHARCARVEVRIAYLADRL 330 Query: 531 KLTVQDNGC-GVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 ++V+D+G G P A + +G+I MR+R + G GG EV ++ Sbjct: 331 TISVRDDGGEGKPAIAAPGSGHGLIGMRERVRICGGRLSAGPLGEGGFEVRLSLP 385 >UniRef50_B8G173 Histidine kinase n=2 Tax=Desulfitobacterium hafniense RepID=B8G173_DESHD Length = 482 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 109/236 (46%), Gaps = 9/236 (3%) Query: 360 QLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ 419 Q + LVE+L A + + ++ +ER I+RELHD +QSL+ + + + L Sbjct: 249 QEREALVEELQAKETVRQELLKKVISAQEDERKRISRELHDEASQSLTSLILGLKYLSEL 308 Query: 420 GDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGF 478 + E S + S+++ +++ ++ + R L + GL PA+E + + ++ Sbjct: 309 EEH--EKSPAMASELKELASSTLKEVHRIAVELRPTVLDDMGLVPAIERFVKFFKRQYRL 366 Query: 479 PVKLDYQ-LPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDN 537 V Q +P+ I L +I +EAL+N K+++A + + + V L ++D+ Sbjct: 367 DVDFHAQNRIASRLPNEIEITLYRIVQEALTNVAKYAEARNASIVLEIKPDYVNLIIEDD 426 Query: 538 GCGVPEN-----AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 G G + + +H G+ M++R L G+ + GT V V E+ Sbjct: 427 GKGFDVDQVLKSSASDSHLGIAGMQERTSLLGGEFTIESSPDQGTAVYVRIPMERR 482 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 96/245 (39%), Gaps = 5/245 (2%) Query: 149 IETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNE 208 I+ + + + V ++LL +F I + + +P R L A + +S D++ R +I G +E Sbjct: 170 IDQLSQLLLITTVIISLLGIFGAILISHLVTKPIRDLAAASQGISLGDYSLRVSIYGTDE 229 Query: 209 MAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQA---NRRLHSRAPLC 265 +A LG N M+ + E V+E A + ++L + A R+ SR Sbjct: 230 IADLGHNFNAMALSIQNYAQEREALVEELQAKETVRQELLKKVISAQEDERKRISRELHD 289 Query: 266 ERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGD 325 E + + + L L ++E +E +L P + +G Sbjct: 290 EASQSLTSLILGLKYLSELEEHEKSPAMASELKELASSTLKEVHRIAVELRPTVLDDMGL 349 Query: 326 RGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLAL-DRHQERQQQ 384 ++ + QY + + Q R S ++ TL + L ++ E + Sbjct: 350 VPAIERF-VKFFKRQYRLDVDFHAQNRIASRLPNEIEITLYRIVQEALTNVAKYAEARNA 408 Query: 385 LIVME 389 IV+E Sbjct: 409 SIVLE 413 >UniRef50_B2J8J6 Multi-sensor signal transduction histidine kinase n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2J8J6_NOSP7 Length = 928 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 76/366 (20%), Positives = 157/366 (42%), Gaps = 24/366 (6%) Query: 223 LAESYAVLEQRVQEKTAGL-----EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQN 277 LA+ +VLEQ+V ++T L E K ++ L R L E + + Sbjct: 575 LADYNSVLEQQVTQRTLELQREIAERKQAEVALLESETRF----RLLAEATFEAIAITEQ 630 Query: 278 LTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADS 337 LL + E + D T + Q+ + + GD G L Sbjct: 631 GILLDTNQTCAEMFGYELSELLGMRVMDFTAPEYREQVMQK--IRSGDEGIYETVCLRKD 688 Query: 338 HTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARE 397 + + + R +S+ + + ++ +T +++ ++ V+ ER +A+E Sbjct: 689 GSTF----PAEIRARVMSYRGRTIRMAAIQDIT-------SRKQAEEATVLAERNRLAQE 737 Query: 398 LHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLT 457 +HD++AQ+ + + + + + E +++L+ R+ ++ + R + R QL Sbjct: 738 IHDTLAQAFTVVIVHLDTASRKLTTDIEVAQKLIKAGRDLAHSGLTEARRSIKALRSQLL 797 Query: 458 EPG-LRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQA 516 E G + AL + + + + +LL+I +EAL+NA K++QA Sbjct: 798 EDGNIFNALNRFATQMFSPSNTHIVCQLIGEIYPLSPDVENNLLRIGQEALTNAFKYAQA 857 Query: 517 SEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS-NHYGMIIMRDRAQSLRGDCRVRRRESG 575 E+ + +A ++Q L ++D+G G ++ N +G+++M +RA+ + ++ Sbjct: 858 GEIQIELAYQESQCSLRIKDDGQGFDIASVSVINSFGLLVMSERAECIGAKLTIQSSPGQ 917 Query: 576 GTEVVV 581 GTEV V Sbjct: 918 GTEVSV 923 Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 36/75 (48%) Query: 158 VMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALN 217 V+ + ++ V + + + +P L A A++ ++ +R I +E+ L + N Sbjct: 364 VLCIVALIVAVAVGVLILRWIAEPVLALKKSALALAQGEWEKRIKIERSDELGELARSFN 423 Query: 218 NMSAELAESYAVLEQ 232 NM+ +L ++ ++ Sbjct: 424 NMADQLQAKFSEMQD 438 >UniRef50_A9B363 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B363_HERA2 Length = 517 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 71/357 (19%), Positives = 142/357 (39%), Gaps = 27/357 (7%) Query: 232 QRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDT 291 Q+V++ L + L L L S L L+ V ++L + + + + Sbjct: 183 QKVEQLAQELAQERDYLQQLSAITAALSSEVQLARVLAQVAEAGRSLANAQAVTVAL--- 239 Query: 292 DDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQG 351 +D ++ P + +L+ L G L Q Sbjct: 240 ----------------LEDPEWRIVASVGSPDTN-LPSLEIMLHAKGETIGRLNYWSIQP 282 Query: 352 RHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKM 411 + + +Q + + + + E+ + + ER +AR+ HD++AQ L+ +++ Sbjct: 283 TNAA--LRQALQPFADAAAMAIYNAQLYEQARFSATLAERNRLARDFHDTLAQQLTGLRL 340 Query: 412 QVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTF-RLQLTEPGLRPALEASCE 470 Q+ M+ PE ++ L + + A+ LR + + L L + Sbjct: 341 QIE-AGMRNLHQPEKAQLRLQKAYDLALAALHDLRRSVWNLSAPAIDGRVLSDVLAELVD 399 Query: 471 EYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQV 530 + + + + +PS AI +L++ EALSN KH+QA V + Q+ Sbjct: 400 TFHQRTNIQSQYSHDGQELTLPSDVAIQVLRVVNEALSNVEKHAQAKHVAIRSTVAAGQL 459 Query: 531 KLTVQDNGCGVPENAIR---SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 ++TV D+G G A++ S +G+ MR+R Q ++G ++ + S GT + + Sbjct: 460 QITVSDDGQGFELAAVQQTASGGFGLTSMRERTQLIQGSLSIQSQPSAGTLLTLCLP 516 >UniRef50_B5VVU4 Integral membrane sensor signal transduction histidine kinase n=3 Tax=Oscillatoriales RepID=B5VVU4_SPIMA Length = 452 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 101/221 (45%), Gaps = 2/221 (0%) Query: 363 DTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA 422 ++ + A L + + + +ER IARE+HDS+ L+ +Q+ + Sbjct: 222 ESRQKLAEANQQLREYAMLIEDRAISQERNRIAREIHDSVGHHLTAQSIQLENAALFIAE 281 Query: 423 LPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKL 482 + + L Q R + ++R + ++R + AL E+ A PV Sbjct: 282 DKQRAARHLQQARELGKEALKEVRASVKSWRSHPLKQSFLQALSQLISEFEATTSVPVAS 341 Query: 483 DYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP 542 + Q+P +P +I L ++ +EAL+N KH+QA++V + + +N + L ++DNGCG Sbjct: 342 NLQIPD-TLPLDISIVLYRVIQEALTNISKHAQATKVDLFLLENSREFALKIEDNGCGFN 400 Query: 543 ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 A + +G+ M +R ++ G + G ++ V Sbjct: 401 P-AQNTTGFGLQGMGERVMAVGGHFDLNSSPGEGCKIEVKI 440 >UniRef50_C5AKB3 Sensory box histidine kinase n=1 Tax=Burkholderia glumae BGR1 RepID=C5AKB3_BURGB Length = 687 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 64/240 (26%), Positives = 112/240 (46%), Gaps = 17/240 (7%) Query: 362 VDTLVEQLTATLALDRHQERQQ------QLIVMEERATIARELHDSIAQSLSCMKMQVSC 415 + + E++ + AL+ ++ + Q EE+ +ARELHD + Q L+ ++M+ S Sbjct: 437 LRDVTERVRSDNALEHARDELRAWSAHLQQAGEEEKTRLARELHDDLGQQLAVLEMEASA 496 Query: 416 LQMQGDALPESSRE---------LLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPAL 465 D + + +R+ L +R +++ A +R + R L + G+ PA+ Sbjct: 497 AAQALDRVLDGARDPGLIETAVNKLHGMRRLTDSAVASVRRVAANLRPLMLDDLGVVPAI 556 Query: 466 EASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ 525 E +++ + G V L R + A L +I +EAL N KH+QAS V + + Sbjct: 557 EWLASDFAKRHGIEVVRHVALGERTLTGAGATALFRIVQEALVNVAKHAQASRVDICLKA 616 Query: 526 NDNQVKLTVQDNGCGVPENAIRSNH-YGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 + L V DNG GVP R+ +G+I +R+RA +L G + G + VT Sbjct: 617 VGDACVLRVADNGRGVPHERPRAGKAFGLIGVRERAHALGGRLTIAGPPGQGFSITVTLP 676 >UniRef50_A1WYG6 Histidine kinase n=1 Tax=Halorhodospira halophila SL1 RepID=A1WYG6_HALHL Length = 475 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 85/390 (21%), Positives = 145/390 (37%), Gaps = 37/390 (9%) Query: 246 QILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTD------DEENHQE 299 + L L L E L L L T +R++D + Sbjct: 74 EALHLLSALGVVAAQARDLDELLQGSLERLIEQTGATAAAVRLFDEQGSLRLVEASGLNA 133 Query: 300 FTCQPDMTCDDKGCQLCPRGV---------------------LPVGDRGTTLKWRLAD-S 337 + GC G LP + L + D + Sbjct: 134 GFIDAERRQPAAGCSCAIAGERGTVQFRGDLRQCIRRSGCNPLPNRPQLAMLAVPILDPA 193 Query: 338 HTQYGILLATLPQGRHLSH-DQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIAR 396 + GI L ++++ + QL A +A R + R Q + EER +A Sbjct: 194 GERVGIYNIYLEPSEAQRWMHPPRMLEWIGHQLGAAIARVRDEYRSHQGALQEERNLLAH 253 Query: 397 ELHDSIAQSLSCMKMQVSCL--QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL 454 ELHD++AQ ++ ++++V L + +GDA + L +R L+ + Q+R ++ FR Sbjct: 254 ELHDTVAQEVATLRLRVRQLEERARGDADTAALLAPLEDLRTRLDHTNDQVRTVMQQFRT 313 Query: 455 QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHS 514 Q L AL + G V+L ++ P + + +H+ +I EALSNA H Sbjct: 314 QALGTPLETALSRLANRFRRDSGIEVRLIHRWPELALGEREQLHIHRIVEEALSNAWHHG 373 Query: 515 QASEVVVTVAQNDNQVKLTVQDNGCGV------PENAIRSNHYGMIIMRDRAQSLRGDCR 568 A V + + + L ++D+GCG + S +G+ MR+RA+ L Sbjct: 374 GARNVRLQLETPGGDLCLLIEDDGCGFVVDDVPDSDPAESRGHGLRGMRERARHLGAILT 433 Query: 569 VRRRESGGTEVVVTFIPEKTFTDVQGDTHE 598 V GT + + + T H+ Sbjct: 434 VESDPGQGTTIHLRLPQPQRLTWTTKSLHQ 463 >UniRef50_C3XBQ9 DNA-binding response regulator n=2 Tax=Oxalobacter formigenes RepID=C3XBQ9_OXAFO Length = 225 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 60/216 (27%), Positives = 111/216 (51%), Gaps = 3/216 (1%) Query: 374 ALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQ 433 R Q+ I +ER IARE+HD + Q L ++++V+ L+ + E E + + Sbjct: 11 EELRELIDHQERIREDERKRIAREIHDELGQRLLALRIEVTLLKQETFDSREKRSERIDE 70 Query: 434 IRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPS 493 + +L+++ +R L+ R + + GL +L+ ++++ + G + V Sbjct: 71 VLGQLDSTVKSVRNLINNLRPAVLDLGLVASLDWQAKDFTRRNGIECVFETHDENLEVDD 130 Query: 494 HQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS-NHYG 552 +A L ++ +EAL+N +KH++AS+V V + ND+ + L + DNG G+P+ R YG Sbjct: 131 ERATVLFRVLQEALTNIVKHAKASKVSVKLDGNDDTLVLKISDNGIGMPKVRNRKIKSYG 190 Query: 553 MIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 + +R+R L G+ R+ GT + IP KT Sbjct: 191 LAGIRERIGMLNGEFRIATG-DTGTTLTFR-IPLKT 224 >UniRef50_C0GH42 Multi-sensor signal transduction histidine kinase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GH42_9FIRM Length = 651 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 12/230 (5%) Query: 367 EQLTATLALDRHQERQQQ-------LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ 419 + + + +R QQ EER I+RELHDS AQSL + Q+ + Sbjct: 409 QHIAKDITEERKLHENQQFYIEHITRAQEEERLRISRELHDSTAQSLIVVLHQLEKYLVS 468 Query: 420 GDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGF 478 D L L + ++ A ++R+ R L + GL P+LE +E + G Sbjct: 469 SDHLRLGDSRFLFNVAEQVKAILQEVRQFSRDLRPSILDDLGLVPSLEWYIDELNRTHGL 528 Query: 479 PVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNG 538 V L+ +++ + L +I +EAL N ++H++A+ V + ++N+V++ VQDNG Sbjct: 529 KVDLNIIGQKQMLRPEIRVSLFRIIQEALRNVMRHAEANNAKVKIEFDNNEVRVVVQDNG 588 Query: 539 CGVPENA----IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 G +R+ G+ M +RA+ L G + + GT + + Sbjct: 589 KGFDAEPLGDLLRNGKLGLAGMHERAKILGGSIEISSAKGAGTTIFIAVP 638 >UniRef50_C1XS12 Histidine kinase with GAF domain n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS12_9DEIN Length = 396 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 93/402 (23%), Positives = 159/402 (39%), Gaps = 57/402 (14%) Query: 234 VQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDD 293 +Q LE + LS L + L+S A L L+ L L L + + + Sbjct: 3 IQSNQNRLERRLGELSTLNRILEVLNSEADFERALETALHELVELLGLSTGWVFLTRMEP 62 Query: 294 EENHQEFTC------------QPDMTCDDKGCQLCP------------------RGVLPV 323 + HQ + + C + C R Sbjct: 63 GDAHQGGFSLAGFAGLPPALDRGEQACLREAGCDCQWLFKKGRLDKGVNIVECSRLESAE 122 Query: 324 GDRGTT---LKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQE 380 GD+G + GIL P + + + + L R QE Sbjct: 123 GDKGGLEVHASVPILAEPGPVGILNLASPGPDPFDPETLEFLTAVGRALGLAFKRARLQE 182 Query: 381 RQQQ----LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRN 436 ++ + L +EERA +ARE+HDS+AQ L + + + + E++ E + + Sbjct: 183 QRTREREALATLEERARLAREMHDSVAQLLFAADLSLRVAREGPNEQRETALERSALL-- 240 Query: 437 ELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVP---- 492 + ++ +LR L+ R GL AL E S V++ ++ P +P Sbjct: 241 -VGSALDELRGLVELLRPADLSQGLEAALCRLAERVSG----SVRVHFESPAYGIPVAWF 295 Query: 493 ------SHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI 546 A L +IA+E + NALKH++A + + + + V+L V+D+G G+P Sbjct: 296 RRAKRGEELAEALYRIAQEGVHNALKHAKAKNIWIRIEKKPKLVRLRVEDDGKGLPPRFS 355 Query: 547 RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF-IPEK 587 R G++ + +RA+SL+G R+ R GG ++ V F IP+K Sbjct: 356 R--GLGLLSLEERAKSLQGTLRLGNRPGGGAKLEVAFPIPDK 395 >UniRef50_A9AW12 Multi-sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AW12_HERA2 Length = 584 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 127/318 (39%), Gaps = 14/318 (4%) Query: 279 TLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSH 338 D+ LR+ +D V + + L+ Sbjct: 263 VGSGDLNLRIAIEPTGIMASILASGTPRILNDLRQSHALSSVPSMQNCACVCCVPLSAGR 322 Query: 339 TQYGILLATLPQGRHLSHDQQQLVDTLVE-----QLTATLALDRHQERQQQLIVMEE-RA 392 YGI++ + + ++ D+ +V L L A L + ER + + EE R Sbjct: 323 RNYGIVVVGVDRNE-INEDELGMVSALANYAIIAMLNAQLVGELRDERTKLISKEEEVRQ 381 Query: 393 TIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTF 452 +AR+LHD AQS++ + M + ++ + P + L+++ + +R LL Sbjct: 382 QLARDLHDGPAQSVAAITMNIEFVKRLLEREPSRVMQELTKMGELARRTTYDIRTLLFEL 441 Query: 453 RL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNAL 511 R L GL L + V L+ + + + + L I +EA +NA+ Sbjct: 442 RPLTLDSQGLVATLREYVTRFKDGT-TQVILEETVGELRLDAKREGTLFNIIQEASNNAM 500 Query: 512 KHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS-----NHYGMIIMRDRAQSLRGD 566 KH+QA + + + + +++ TVQD+G G A+R+ +G++ + +RA+ + G Sbjct: 501 KHAQAKHIWIRLTRQGDELMATVQDDGKGFDLQAVRANYSKRGSFGLLNIDERARMVGGS 560 Query: 567 CRVRRRESGGTEVVVTFI 584 + GT V V Sbjct: 561 AEMTSAVGAGTTVRVIVP 578 >UniRef50_D0WS36 Putative signal transduction histidine kinase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WS36_9ACTO Length = 418 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 77/368 (20%), Positives = 135/368 (36%), Gaps = 16/368 (4%) Query: 244 KNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQ 303 N ++ + P+ L +L G LL + + D T Sbjct: 54 ANLLIGLAYAVPMAFRRTHPVPSAL-TILCGAGVHLLLEPANITLADFAVVAAVYAVTVY 112 Query: 304 PDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVD 363 + L G + T+ + + +G L + ++ L Sbjct: 113 GPVWAHRLVLSLTLLGSFFIAIPTLTMGGAIRNDWATWGPFLGIVTYIMAVTLAVYGLAL 172 Query: 364 TLVEQLTATLALDR-------HQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL 416 QL L+L R + +++L V+EER+ IARE+HD +A +LS + Q Sbjct: 173 ARRSQLAKMLSLMRIASDAQAAAKTERELAVLEERSRIAREMHDIVAHTLSVVIAQADGG 232 Query: 417 QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ--LTEPGLRPALEASCEEYSA 474 + PE+S L+ I + + +R ++ R +P L +E E Sbjct: 233 RYAATKDPEASTRALATISDMARDALKDIRSIIGVLRESEGDEQPTLPQPIERDLETLVR 292 Query: 475 K---FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQAS-EVVVTVAQNDNQV 530 G V R +P + +I +EA++N+LKH+ + + V + D + Sbjct: 293 NVRDSGVRVSFVRTGQSRTLPVGVGNAVYRICQEAITNSLKHAGPTPHITVLLQTTDAAL 352 Query: 531 KLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFT 590 L V D+G G +G+I M +RA + G R GG V+ + IP Sbjct: 353 LLQVDDDGRG-AAAPSDGKGHGLIGMSERASAFGGSVTSGPRPGGGFRVLAS-IPIPHLD 410 Query: 591 DVQGDTHE 598 + H+ Sbjct: 411 NSNRSEHD 418 >UniRef50_Q5WCK2 Two-component sensor histidine kinase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCK2_BACSK Length = 354 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 5/254 (1%) Query: 333 RLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLAL-DRHQERQQQLIVMEER 391 + Q G + A + L D ++ + ++ + + + + IV +ER Sbjct: 90 HMEKGREQAGQMSADFKEASSLIIDMERRMSKQADRSQKLMEQWAEKESQLKSEIVSQER 149 Query: 392 ATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTT 451 IARELHDS++Q L M +S + E+ ++ QI +N + +R LL Sbjct: 150 NRIARELHDSVSQQLYAASMLLSAAVNGKNQDIEALQKRCEQIEKVVNDAQNDMRALLLQ 209 Query: 452 FRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNA 510 R QL + + +E + + K P+ ++ + L +I++EA++NA Sbjct: 210 LRPIQLEDQSFKEGVEQLVDSLAEKH--PLSFSVRIADAPLSPGIEDQLFRISQEAIANA 267 Query: 511 LKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVR 570 L+H++A E+ + + D L + D+G G + YG+ + +RA+ + R+ Sbjct: 268 LRHAEAKEISLYYDKFDQFALLKITDDGVGFDRKEH-TGGYGLNSIEERAEEIGATTRIV 326 Query: 571 RRESGGTEVVVTFI 584 GT V V Sbjct: 327 SVPGQGTSVEVKVP 340 >UniRef50_Q5P5H6 Two-component sensor n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5H6_AZOSE Length = 421 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 70/315 (22%), Positives = 129/315 (40%), Gaps = 10/315 (3%) Query: 279 TLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSH 338 L E + QPD + R L G R D Sbjct: 104 VSLHGYENKAQLIGLTPADVSPESQPDGRLSSEKAIEVVRIALENGSYHFPWAIRRKDGE 163 Query: 339 T--QYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQ---QQLIVMEERAT 393 +L A G+ + H Q V + +R + + EE+A+ Sbjct: 164 VLDAEVVLTAIFVGGKKIIHATWQDVTAGNRAKKKLIESERFLRETCKHVEEVREEEKAS 223 Query: 394 IARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFR 453 IARE+HD + Q L+ +KM+V C++ E + + +++ ++R++ T R Sbjct: 224 IAREIHDELGQLLTALKMEVFCIKPGRSHDVELMSKA-DAMGVLIDSIIVRVRDIATALR 282 Query: 454 LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRL--VPSHQAIHLLQIAREALSNAL 511 ++ E GL A+E +++ + G +L + + + S Q + L +I +E+L+NA Sbjct: 283 PKVLELGLVVAVEWLLQDFMRRSGIHCQLHLEDEGVVNSLGSSQTLALFRILQESLTNAA 342 Query: 512 KHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS--NHYGMIIMRDRAQSLRGDCRV 569 +HS+AS V V +A+N +L ++D+G G + G+ +++R L G + Sbjct: 343 RHSKASNVGVWLARNGKFAELVIEDDGVGFDPSGSDDQLRGLGLRGIKERTILLGGRFEI 402 Query: 570 RRRESGGTEVVVTFI 584 R G ++ V Sbjct: 403 GSRRGAGVKLKVAIP 417 >UniRef50_A3NKQ6 Signal transduction histidine kinase n=29 Tax=Burkholderia RepID=A3NKQ6_BURP6 Length = 492 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 87/416 (20%), Positives = 153/416 (36%), Gaps = 29/416 (6%) Query: 178 LLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALN------NMSAELAESYAVLE 231 +L L A+ Q + R E +L A+ ++A LA S + Sbjct: 87 VLTGLDDLSVGLQAIQEG--AQDYLLKKRVETPLLSRAIRYAMERHRVAAALAASEERFQ 144 Query: 232 QRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDT 291 V +AGL N ++ + L + G + D++ RV D Sbjct: 145 LAVSGASAGLWDWNPKTGAMYLSPHFKKIMGYEDHELPDEITGHRESIHPDDLK-RVLDA 203 Query: 292 DDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQG 351 T + + + RG L + + G ++ + Sbjct: 204 LKAHLEHRDTYDVEYRVRTRSGDY-----RWIQSRGQALWNSAGEPYRMVGWIMDVTDRK 258 Query: 352 RHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKM 411 R + L + R Q I EE+ IARELHD + Q L+ +KM Sbjct: 259 RDE------------DALRVSREELRRLSAHIQSIREEEKTRIARELHDDLGQQLTALKM 306 Query: 412 QVSCLQMQGDALPESSRE-LLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASC 469 V+ + + +SR L + + +R + R L + GL A+E Sbjct: 307 AVTLVDNELKDAGWASRTSRLPNVYALIGQLLDSVRRIAADLRPVMLDDLGLMAAIEWLT 366 Query: 470 EEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQ 529 E+ ++ PV + A + +I +EAL+N +HS+A+EV + + +++ Sbjct: 367 HEFVERYRIPVTSRIEADDIAFTRGSATEVFRIVQEALTNVARHSEATEVTLDIIRDEPN 426 Query: 530 VKLTVQDNGCGVPENAIRSNH-YGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 + + DNGCG + + H G++ MR+RA L G+ R+ G + T Sbjct: 427 CIVRIADNGCGTARDTRPNRHSLGLLGMRERAARLGGEIRIDTAPGRGFALTATLP 482 >UniRef50_C4DC51 Histidine kinase with GAF domain n=2 Tax=Actinomycetales RepID=C4DC51_9ACTO Length = 566 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 85/346 (24%), Positives = 131/346 (37%), Gaps = 12/346 (3%) Query: 261 RAPLCERLSPVLNGLQNLTLLRD------IELRVYDTDDEENHQEFTCQPDMTCDDKGCQ 314 A L ERL + ++ + L + + + + D Q Sbjct: 218 SADLLERLRQAAPADRAAVMVAHGGGNRLVVLAQTGEGERVDWETSLPANTLLADTWAGQ 277 Query: 315 LCPRGVLPVGDRGT----TLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLT 370 G + GT +L L G++L D Sbjct: 278 QAHTGTSSLARSGTGQVSSLVVPLVADRRTVGLVLLESDLPDAYPSDVVDAAVESTTGAA 337 Query: 371 ATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSREL 430 L E Q L MEER +ARE+HD IAQ L+ + + Q A S E Sbjct: 338 LRLETALLFEEVQSLATMEERQRLAREIHDGIAQELAMLGYGIDHALAQLPADATDSAEQ 397 Query: 431 LSQIRNELNASWAQLRELLTTFRLQLT-EPGLRPALEASCEEYSAKFGFPVKLDYQLPPR 489 L ++R+E+ +LR L R ++ GL A+ + G V L Sbjct: 398 LQELRDEVTRLITELRLSLFELRSEVDRHGGLTTAIADYARTVGSSAGLRVHLSLDEGGA 457 Query: 490 LVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN 549 +P+ LL+IA+EA++NA KH++A + VT + ++ V D+G GV Sbjct: 458 RLPAATEAELLRIAQEAITNARKHARAENLWVTCEVDPPYARIEVADDGTGVSGEGAD-G 516 Query: 550 HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGD 595 YG+ IM +RA+ +RG +R R+ GT V V P V + Sbjct: 517 RYGLTIMSERAERIRGSLEIRPRDPHGTTVAVLLAPSDRPGTVSSE 562 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AFA3 Nitrate/nitrite sensor protein narX n=127 Tax=Ga... 564 e-159 UniRef50_B4TXT2 Nitrate/nitrite sensor protein NarX n=69 Tax=Ent... 554 e-156 UniRef50_B4EWG1 Nitrate/nitrite teo-component system, sensor kin... 478 e-133 UniRef50_B2Q6G3 Putative uncharacterized protein n=3 Tax=Enterob... 468 e-130 UniRef50_A4TJU9 Nitrate/nitrite sensor protein n=29 Tax=Enteroba... 464 e-129 UniRef50_A4VHY8 Two-component sensor NarX n=3 Tax=Pseudomonas Re... 456 e-126 UniRef50_Q3SJ17 Periplasmic Sensor Signal Transduction Histidine... 442 e-122 UniRef50_Q0HUB7 Signal transduction histidine kinase, nitrate/ni... 439 e-121 UniRef50_Q5E3J3 Sensory histidine kinase in two-component regula... 434 e-120 UniRef50_A1U593 Integral membrane sensor signal transduction his... 434 e-120 UniRef50_Q2SF45 Signal transduction histidine kinase, nitrate/ni... 432 e-119 UniRef50_Q0A9X9 Signal transduction histidine kinase, nitrate/ni... 429 e-118 UniRef50_B7UUR7 Two-component sensor NarX n=7 Tax=Gammaproteobac... 427 e-118 UniRef50_A4G5M3 Putative Nitrate/nitrite sensor protein narX n=1... 423 e-117 UniRef50_D0IAW0 Nitrate/nitrite sensor protein n=3 Tax=Gammaprot... 423 e-116 UniRef50_C7RBW7 Histidine kinase n=1 Tax=Kangiella koreensis DSM... 422 e-116 UniRef50_Q47HU2 GAF:ATP-binding region, ATPase-like:Histidine ki... 421 e-116 UniRef50_Q8VUK2 Putative nitrate/nitrite sensor protein n=1 Tax=... 420 e-116 UniRef50_Q9F0Y0 Nitrate/nitrite sensor protein n=1 Tax=Pseudomon... 420 e-116 UniRef50_A7JYP2 Histidine kinase domain protein n=7 Tax=Vibrio R... 419 e-115 UniRef50_Q5NYZ8 Nitrate/nitrite sensor kinase n=1 Tax=Aromatoleu... 419 e-115 UniRef50_B4S080 Signal transduction histidine kinase, nitrate/ni... 418 e-115 UniRef50_Q7NV12 Transmembrane nitrate/nitrite sensor kinase tran... 413 e-114 UniRef50_C4GHV1 Putative uncharacterized protein n=1 Tax=Kingell... 413 e-114 UniRef50_Q5QWJ9 Nitrate/nitrite sensor histidine kinase n=1 Tax=... 411 e-113 UniRef50_Q2C653 Hypothetical nitrate/nitrite sensor protein NarQ... 410 e-113 UniRef50_C0DXB9 Putative uncharacterized protein n=1 Tax=Eikenel... 409 e-112 UniRef50_A5EZZ3 Nitrate/nitrite sensor protein NarQ n=51 Tax=Vib... 408 e-112 UniRef50_P27896 Nitrate/nitrite sensor protein narQ n=113 Tax=En... 408 e-112 UniRef50_Q4FU45 Signal transduction histidine kinase sensor n=2 ... 407 e-112 UniRef50_C7I506 GAF sensor signal transduction histidine kinase ... 407 e-112 UniRef50_C5S0V3 Nitrate/nitrite sensor protein NarQ n=6 Tax=Gamm... 407 e-112 UniRef50_A6D1I3 Signal transduction histidine kinase, nitrate/ni... 403 e-111 UniRef50_B9Z081 Multi-sensor signal transduction histidine kinas... 403 e-110 UniRef50_B4RLW4 NarX/NarQ n=17 Tax=Neisseria RepID=B4RLW4_NEIG2 402 e-110 UniRef50_C4KA07 GAF sensor signal transduction histidine kinase ... 398 e-109 UniRef50_A8FUN8 Two-component sensor NarX n=3 Tax=Shewanella Rep... 398 e-109 UniRef50_C1D9F9 NarX n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 397 e-109 UniRef50_C5T4I9 GAF sensor signal transduction histidine kinase ... 396 e-108 UniRef50_Q5P3L3 Nitrate/nitrite TWO-component sensor NARX n=1 Ta... 395 e-108 UniRef50_A1W358 Signal transduction histidine kinase, nitrate/ni... 393 e-107 UniRef50_Q46R21 GAF:ATP-binding region, ATPase-like:Histidine ki... 392 e-107 UniRef50_A8GHJ7 Integral membrane sensor signal transduction his... 388 e-106 UniRef50_P44604 Sensor protein narQ homolog n=30 Tax=Gammaproteo... 387 e-106 UniRef50_A2SGG0 Signal transduction histidine kinase, nitrate/ni... 387 e-106 UniRef50_A0KIL7 Nitrate/nitrite sensor histidine kinase NarQ n=2... 386 e-105 UniRef50_A9LZC9 Two-component system, NarL family, nitrate/nitri... 378 e-103 UniRef50_A5WD78 Integral membrane sensor signal transduction his... 375 e-102 UniRef50_B8EB80 Histidine kinase n=20 Tax=Shewanella RepID=B8EB8... 371 e-101 UniRef50_C0DXM5 Sensor protein n=1 Tax=Eikenella corrodens ATCC ... 369 e-100 UniRef50_A6FC55 Hypothetical nitrate/nitrite sensor protein NarQ... 369 e-100 UniRef50_C4K985 Histidine kinase n=1 Tax=Thauera sp. MZ1T RepID=... 368 e-100 UniRef50_A4BGQ5 Signal transduction histidine kinase, nitrate/ni... 368 e-100 UniRef50_Q1ZGB4 Nitrate/nitrite sensor protein n=1 Tax=Psychromo... 333 1e-89 UniRef50_A8VTE1 Short-chain dehydrogenase/reductase SDR n=1 Tax=... 328 5e-88 UniRef50_B2CI54 Integral membrane sensor signal transduction his... 326 2e-87 UniRef50_B8GUD0 GAF sensor signal transduction histidine kinase ... 308 4e-82 UniRef50_C0N1R0 Histidine kinase domain protein n=1 Tax=Methylop... 307 1e-81 UniRef50_Q2Y9N2 Periplasmic sensor signal transduction histidine... 296 2e-78 UniRef50_Q67S65 Two-component sensor histidine kinase n=1 Tax=Sy... 283 1e-74 UniRef50_B2AKD3 Putative multi-sensor signal transduction histid... 278 4e-73 UniRef50_A1AXR2 Signal transduction histidine kinase, nitrate/ni... 277 8e-73 UniRef50_Q1H473 Signal transduction histidine kinase, nitrate/ni... 274 5e-72 UniRef50_C6XAG1 Histidine kinase n=1 Tax=Methylovorus sp. SIP3-4... 272 3e-71 UniRef50_D1UN54 PAS/PAC sensor signal transduction histidine kin... 272 4e-71 UniRef50_C6QH09 Histidine kinase n=1 Tax=Hyphomicrobium denitrif... 271 8e-71 UniRef50_B4WPC3 GAF domain protein n=1 Tax=Synechococcus sp. PCC... 267 7e-70 UniRef50_Q7NE94 Glr3986 protein n=1 Tax=Gloeobacter violaceus Re... 267 1e-69 UniRef50_B9LCJ4 GAF sensor signal transduction histidine kinase ... 266 3e-69 UniRef50_Q67RQ8 Two-component system sensor kinase n=1 Tax=Symbi... 265 4e-69 UniRef50_Q1AZP1 Periplasmic sensor signal transduction histidine... 265 4e-69 UniRef50_B8G147 Multi-sensor signal transduction histidine kinas... 261 4e-68 UniRef50_B0C7C8 GAF domain protein n=1 Tax=Acaryochloris marina ... 261 7e-68 UniRef50_C0N6H4 Putative uncharacterized protein n=1 Tax=Methylo... 261 8e-68 UniRef50_Q1ASU9 GAF sensor signal transduction histidine kinase ... 259 3e-67 UniRef50_C5SBA0 Histidine kinase n=1 Tax=Allochromatium vinosum ... 259 3e-67 UniRef50_Q1H0K4 Multi-sensor signal transduction histidine kinas... 258 4e-67 UniRef50_A5UUR7 Multi-sensor signal transduction histidine kinas... 258 4e-67 UniRef50_A9WFF8 Histidine kinase dimerisation and phosphoaccepto... 257 7e-67 UniRef50_D1C419 Histidine kinase n=1 Tax=Sphaerobacter thermophi... 257 7e-67 UniRef50_Q1IXN3 Periplasmic sensor signal transduction histidine... 256 1e-66 UniRef50_D1C9Z9 GAF sensor signal transduction histidine kinase ... 256 1e-66 UniRef50_A6CIM0 Multi-sensor signal transduction histidine kinas... 256 3e-66 UniRef50_D1C657 GAF sensor signal transduction histidine kinase ... 254 8e-66 UniRef50_B7AAT7 Histidine kinase n=1 Tax=Thermus aquaticus Y51MC... 253 1e-65 UniRef50_D1CB59 GAF sensor signal transduction histidine kinase ... 252 2e-65 UniRef50_B2JVQ4 Integral membrane sensor signal transduction his... 251 6e-65 UniRef50_Q025Z0 Histidine kinase n=1 Tax=Candidatus Solibacter u... 251 8e-65 UniRef50_D1CE67 Multi-sensor signal transduction histidine kinas... 250 1e-64 UniRef50_Q67MG9 Sensor protein n=1 Tax=Symbiobacterium thermophi... 249 2e-64 UniRef50_B9XNW0 Multi-sensor signal transduction histidine kinas... 249 3e-64 UniRef50_A5FQK5 Multi-sensor signal transduction histidine kinas... 249 3e-64 UniRef50_B2TAX2 PAS/PAC sensor signal transduction histidine kin... 247 6e-64 UniRef50_A3DEX1 Histidine kinase n=5 Tax=Clostridium RepID=A3DEX... 247 7e-64 UniRef50_C1CWD4 Putative histidine kinase, classic; putative mem... 247 7e-64 UniRef50_C6CGT0 PAS/PAC sensor signal transduction histidine kin... 246 2e-63 UniRef50_C3B362 Two-component sensor protein yhcY n=4 Tax=Bacill... 246 2e-63 UniRef50_B4WQU2 GAF domain protein n=1 Tax=Synechococcus sp. PCC... 246 2e-63 UniRef50_A9B1S5 Multi-sensor signal transduction histidine kinas... 246 2e-63 UniRef50_B8FFK0 PAS/PAC sensor signal transduction histidine kin... 244 7e-63 UniRef50_B8D0J3 Histidine kinase n=2 Tax=Clostridia RepID=B8D0J3... 244 7e-63 UniRef50_C4XMF3 Two-component sensor histidine kinase n=1 Tax=De... 244 8e-63 UniRef50_B9L060 Putative two component system histidine kinase n... 243 1e-62 UniRef50_B2T8J5 Multi-sensor signal transduction histidine kinas... 243 1e-62 UniRef50_B9XSI9 Multi-sensor signal transduction histidine kinas... 243 1e-62 UniRef50_A6SXZ6 Two-component sensor histidine kinase n=2 Tax=Ox... 242 2e-62 UniRef50_A9B046 Integral membrane sensor signal transduction his... 241 5e-62 UniRef50_B2VGC1 HrpX protein (Hrp cluster) n=6 Tax=Enterobacteri... 241 7e-62 UniRef50_D1C6S2 Histidine kinase n=1 Tax=Sphaerobacter thermophi... 241 7e-62 UniRef50_A7BTT3 Sensory transduction histidine kinase n=1 Tax=Be... 241 7e-62 UniRef50_B8HT67 GAF sensor signal transduction histidine kinase ... 241 7e-62 UniRef50_Q7N5B4 Similar to nitrate/nitrite sensor protein NarX n... 240 1e-61 UniRef50_Q1IWU8 Multi-sensor signal transduction histidine kinas... 240 1e-61 UniRef50_B8CZJ7 Integral membrane sensor signal transduction his... 240 1e-61 UniRef50_Q3SG40 GAF Sensor Signal Transduction Histidine Kinase ... 240 1e-61 UniRef50_UPI0001746019 hypothetical protein VspiD_01665 n=1 Tax=... 240 1e-61 UniRef50_Q5SJ33 Sensor histidine kinase n=3 Tax=Thermus RepID=Q5... 240 1e-61 UniRef50_B6JD37 Signal transduction histidine kinase containing ... 239 2e-61 UniRef50_C6BTX2 GAF sensor signal transduction histidine kinase ... 239 3e-61 UniRef50_Q45827 Uncharacterized sensor-like histidine kinase Cau... 239 3e-61 UniRef50_Q47G83 PAS n=1 Tax=Dechloromonas aromatica RCB RepID=Q4... 239 3e-61 UniRef50_A6SWF1 Sensory box histidine kinase n=1 Tax=Janthinobac... 237 7e-61 UniRef50_C1XJE4 Histidine kinase n=2 Tax=Meiothermus RepID=C1XJE... 237 8e-61 UniRef50_C4DRB4 Signal transduction histidine kinase, COG4585 n=... 237 1e-60 UniRef50_Q1IIL1 GAF sensor signal transduction histidine kinase ... 236 2e-60 UniRef50_Q814L6 Two-component sensor protein yhcY n=40 Tax=Bacil... 236 2e-60 UniRef50_D1CAA4 GAF sensor signal transduction histidine kinase ... 236 2e-60 UniRef50_B5I2X6 Two-component system sensor kinase n=10 Tax=Stre... 236 2e-60 UniRef50_B7IV98 Sensor histidine kinase n=76 Tax=Bacillales RepI... 236 2e-60 UniRef50_Q1CZ92 Sensor histidine kinase n=1 Tax=Myxococcus xanth... 236 2e-60 UniRef50_Q3M1D8 Serine/threonine protein kinase and signal trans... 235 3e-60 UniRef50_D2B7Q9 Histidine kinase n=1 Tax=Streptosporangium roseu... 235 3e-60 UniRef50_A7NG30 Multi-sensor signal transduction histidine kinas... 235 4e-60 UniRef50_A0R9R9 Possible sensor histidine kinase domain n=36 Tax... 235 5e-60 UniRef50_Q0A821 Signal transduction histidine kinase, nitrate/ni... 234 6e-60 UniRef50_B8G136 Sensor protein n=1 Tax=Desulfitobacterium hafnie... 234 6e-60 UniRef50_Q2LRG0 Signal transduction histidine kinase n=1 Tax=Syn... 234 7e-60 UniRef50_C9NJB7 GAF sensor signal transduction histidine kinase ... 234 8e-60 UniRef50_O32198 Sensor histidine kinase liaS n=5 Tax=Bacillus Re... 233 1e-59 UniRef50_Q0KDJ4 Signal transduction histidine kinase containing ... 233 1e-59 UniRef50_C7MRK1 PAS domain S-box n=1 Tax=Saccharomonospora virid... 233 1e-59 UniRef50_C5V7S2 PAS/PAC sensor signal transduction histidine kin... 233 1e-59 UniRef50_C1F9F5 Two component regulator propeller/histidine kina... 233 1e-59 UniRef50_C1YIX9 Signal transduction histidine kinase, COG4585 n=... 233 1e-59 UniRef50_B0K3K4 Histidine kinase n=11 Tax=Thermoanaerobacterales... 233 2e-59 UniRef50_C1XTQ5 PAS domain S-box protein n=1 Tax=Meiothermus sil... 232 2e-59 UniRef50_B8G173 Histidine kinase n=2 Tax=Desulfitobacterium hafn... 232 2e-59 UniRef50_B4D6U9 Multi-sensor signal transduction histidine kinas... 232 3e-59 UniRef50_B1ZVL9 Multi-sensor signal transduction histidine kinas... 232 3e-59 UniRef50_C0ZJS5 Two-component sensor histidine kinase n=1 Tax=Br... 232 3e-59 UniRef50_C6NZS6 Multi-sensor signal transduction histidine kinas... 232 4e-59 UniRef50_Q81FX4 Two-component sensor protein yvqE n=44 Tax=Bacil... 232 4e-59 UniRef50_B1ZR83 Integral membrane sensor signal transduction his... 231 4e-59 UniRef50_C5UZV3 PAS/PAC sensor signal transduction histidine kin... 231 5e-59 UniRef50_Q2B2D2 Two-component sensor histidine kinase n=2 Tax=Ba... 231 5e-59 UniRef50_Q3SJC2 Multi-sensor Signal Transduction Histidine Kinas... 231 5e-59 UniRef50_A9B363 Integral membrane sensor signal transduction his... 230 8e-59 UniRef50_B4WLR8 GAF domain protein n=1 Tax=Synechococcus sp. PCC... 230 8e-59 UniRef50_A9AW12 Multi-sensor signal transduction histidine kinas... 230 8e-59 UniRef50_Q2SUK5 Two-component hybrid sensor and regulator n=33 T... 230 1e-58 UniRef50_A3NKQ6 Signal transduction histidine kinase n=29 Tax=Bu... 230 1e-58 UniRef50_B4CYV7 Histidine kinase n=1 Tax=Chthoniobacter flavus E... 230 1e-58 UniRef50_B9TKD1 Putative uncharacterized protein (Fragment) n=1 ... 230 1e-58 UniRef50_A9B5L1 Integral membrane sensor signal transduction his... 229 2e-58 UniRef50_C6P6J2 PAS/PAC sensor signal transduction histidine kin... 229 2e-58 UniRef50_B3U4S0 Response regulator receiver n=1 Tax=Candidatus N... 229 2e-58 UniRef50_C5AIA0 Multi-sensor signal transduction histidine kinas... 229 2e-58 UniRef50_C1XM57 Signal transduction histidine kinase, COG4585 n=... 229 3e-58 UniRef50_A7NRQ7 Integral membrane sensor signal transduction his... 228 4e-58 UniRef50_B2J8J6 Multi-sensor signal transduction histidine kinas... 228 4e-58 UniRef50_Q0AF09 Multi-sensor signal transduction histidine kinas... 227 7e-58 UniRef50_D2BHE9 Sensor histidine kinase n=5 Tax=Dehalococcoides ... 227 1e-57 UniRef50_B9XSJ3 Multi-sensor signal transduction histidine kinas... 227 1e-57 UniRef50_A9WFK4 GAF domain protein n=3 Tax=Chloroflexus RepID=A9... 227 1e-57 UniRef50_UPI0001693FB4 two-component sensor histidine kinase of ... 226 2e-57 UniRef50_A9B7C8 GAF sensor signal transduction histidine kinase ... 226 2e-57 UniRef50_B4D830 Integral membrane sensor signal transduction his... 226 2e-57 UniRef50_C6J152 Histidine kinase dimerization and phosphoaccepto... 226 2e-57 UniRef50_B5JKT1 Histidine kinase domain protein n=1 Tax=Verrucom... 225 3e-57 UniRef50_Q1AVR5 Periplasmic sensor signal transduction histidine... 225 3e-57 UniRef50_B4UAL2 Integral membrane sensor signal transduction his... 225 3e-57 UniRef50_C8NE28 Sensor histidine kinase n=1 Tax=Granulicatella a... 225 3e-57 UniRef50_UPI0001C314AD GAF sensor signal transduction histidine ... 225 4e-57 UniRef50_Q13H12 PAS/PAC sensor signal transduction histidine kin... 225 4e-57 UniRef50_A6WW19 Integral membrane sensor signal transduction his... 225 5e-57 UniRef50_C0Q8Z0 Two-component hybrid sensor and response regulat... 225 5e-57 UniRef50_B4D5C3 Histidine kinase n=1 Tax=Chthoniobacter flavus E... 225 5e-57 UniRef50_Q67QY8 Two-component sensor histidine kinase n=1 Tax=Sy... 225 5e-57 UniRef50_UPI0001C312DE integral membrane sensor signal transduct... 224 5e-57 UniRef50_Q1D524 Sensor histidine kinase n=2 Tax=Cystobacterineae... 224 6e-57 UniRef50_UPI0001B54FA0 histidine kinase n=1 Tax=Streptomyces sp.... 224 6e-57 UniRef50_Q67L27 Two-component sensor histidine kinase n=1 Tax=Sy... 224 6e-57 UniRef50_UPI0001B54039 histidine kinase n=1 Tax=Streptomyces sp.... 224 9e-57 UniRef50_A4XZI6 Multi-sensor signal transduction histidine kinas... 224 9e-57 UniRef50_A1AUQ4 PAS/PAC sensor signal transduction histidine kin... 224 1e-56 UniRef50_D1VK31 Histidine kinase n=1 Tax=Frankia sp. EuI1c RepID... 224 1e-56 UniRef50_A9WAP8 ATP-binding region ATPase domain protein n=3 Tax... 223 1e-56 UniRef50_Q74GJ3 Sensory box histidine kinase n=1 Tax=Geobacter s... 223 1e-56 UniRef50_B0TH54 Sensor histidine kinase, putative n=1 Tax=Heliob... 223 2e-56 UniRef50_A8LRP9 Integral membrane sensor signal transduction his... 222 2e-56 UniRef50_Q5NZX5 Putative sensory protein, two-component system n... 222 2e-56 UniRef50_C5C2U0 Histidine kinase n=2 Tax=Actinomycetales RepID=C... 222 3e-56 UniRef50_A1HRV6 Integral membrane sensor signal transduction his... 222 3e-56 UniRef50_Q747N5 Sensory box histidine kinase n=2 Tax=Geobacter R... 222 3e-56 UniRef50_Q8YV44 Two-component sensor histidine kinase n=3 Tax=Cy... 222 3e-56 UniRef50_C0GH42 Multi-sensor signal transduction histidine kinas... 222 3e-56 UniRef50_C6XAR1 PAS/PAC sensor signal transduction histidine kin... 222 4e-56 UniRef50_A1HU07 Integral membrane sensor signal transduction his... 221 5e-56 UniRef50_Q5WCK2 Two-component sensor histidine kinase n=1 Tax=Ba... 221 5e-56 UniRef50_A6GSY8 Sensory transduction histidine kinase n=1 Tax=Li... 221 5e-56 UniRef50_B2JH43 PAS/PAC sensor signal transduction histidine kin... 221 6e-56 UniRef50_UPI00017893B7 integral membrane sensor signal transduct... 221 6e-56 UniRef50_C2C0V0 Possible histidine kinase n=5 Tax=Listeria RepID... 221 7e-56 UniRef50_C0VWJ7 Two-component sensory kinase n=2 Tax=Corynebacte... 221 7e-56 UniRef50_UPI00017449FC GAF domain protein n=1 Tax=Verrucomicrobi... 220 8e-56 UniRef50_Q01NC5 Integral membrane sensor signal transduction his... 220 8e-56 UniRef50_A5GBT2 Integral membrane sensor signal transduction his... 220 9e-56 UniRef50_UPI000169369A sensor histidine kinase n=1 Tax=Paenibaci... 220 1e-55 UniRef50_C6J7D3 ATP-binding region ATPase domain-containing prot... 220 1e-55 UniRef50_Q47FQ9 Response regulator receiver:ATP-binding region, ... 220 1e-55 UniRef50_Q314U9 Histidine kinase n=1 Tax=Desulfovibrio desulfuri... 220 1e-55 UniRef50_C9RWH5 Integral membrane sensor signal transduction his... 220 1e-55 UniRef50_Q4ZMH3 PAS n=6 Tax=Pseudomonas RepID=Q4ZMH3_PSEU2 220 1e-55 UniRef50_C3PKA7 Two-component system sensor kinase n=2 Tax=Coryn... 220 1e-55 UniRef50_C4RLN3 Histidine kinase n=1 Tax=Micromonospora sp. ATCC... 220 1e-55 UniRef50_Q0RWJ5 Sensor kinase, two-component system n=7 Tax=Rhod... 220 1e-55 UniRef50_A4J6C1 Histidine kinase n=2 Tax=Peptococcaceae RepID=A4... 220 1e-55 UniRef50_B2UDW5 Multi-sensor signal transduction histidine kinas... 219 2e-55 UniRef50_Q9KDL3 Two-component sensor histidine kinase n=1 Tax=Ba... 219 2e-55 UniRef50_B2J8K5 Integral membrane sensor signal transduction his... 219 2e-55 UniRef50_D2WA17 NirW n=1 Tax=Methylomonas sp. 16a RepID=D2WA17_9... 219 2e-55 UniRef50_B2GCM4 Two-component sensor histidine kinase n=8 Tax=La... 219 2e-55 UniRef50_Q0B944 Multi-sensor signal transduction histidine kinas... 219 3e-55 UniRef50_C8WYI2 Histidine kinase n=2 Tax=Alicyclobacillus acidoc... 218 5e-55 UniRef50_D2ARZ7 Histidine kinase n=1 Tax=Streptosporangium roseu... 218 5e-55 UniRef50_D0WS36 Putative signal transduction histidine kinase n=... 218 5e-55 UniRef50_B1ZSZ0 Histidine kinase n=1 Tax=Opitutus terrae PB90-1 ... 218 6e-55 UniRef50_B5HYF1 Two-component system sensor kinase n=10 Tax=Stre... 218 6e-55 UniRef50_UPI00016AFAA4 response regulator/sensory box histidine ... 218 6e-55 UniRef50_D0BKY9 Sensor histidine kinase VraS n=1 Tax=Granulicate... 218 6e-55 UniRef50_A4X9X2 ATP-binding region, ATPase domain protein domain... 217 7e-55 UniRef50_C0XNJ5 Two component system histidine kinase n=1 Tax=Co... 217 7e-55 UniRef50_B1Z4G8 Multi-sensor signal transduction histidine kinas... 217 8e-55 UniRef50_C0Z627 Two-component sensor histidine kinase n=3 Tax=Ba... 217 9e-55 UniRef50_B2TG29 PAS/PAC sensor signal transduction histidine kin... 217 9e-55 UniRef50_A1WYG6 Histidine kinase n=1 Tax=Halorhodospira halophil... 217 1e-54 UniRef50_C4XNR7 Two-component sensor histidine kinase n=1 Tax=De... 217 1e-54 UniRef50_B5JFN8 Histidine kinase domain protein n=1 Tax=Verrucom... 217 1e-54 Sequences not found previously or not previously below threshold: UniRef50_O07527 Sensor histidine kinase yhcY n=5 Tax=Bacillus Re... 225 3e-57 UniRef50_C6D0G7 GAF sensor signal transduction histidine kinase ... 217 9e-55 >UniRef50_P0AFA3 Nitrate/nitrite sensor protein narX n=127 Tax=Gammaproteobacteria RepID=NARX_ECO57 Length = 598 Score = 564 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 598/598 (100%), Positives = 598/598 (100%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL Sbjct: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 Query: 61 LAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNR 120 LAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNR Sbjct: 61 LAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNR 120 Query: 121 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ 180 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ Sbjct: 121 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ 180 Query: 181 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG Sbjct: 181 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF 300 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF Sbjct: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF 300 Query: 301 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ 360 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ Sbjct: 301 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ 360 Query: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG Sbjct: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 Query: 421 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV 480 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV Sbjct: 421 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV 480 Query: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG 540 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG Sbjct: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG 540 Query: 541 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE 598 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE Sbjct: 541 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE 598 >UniRef50_B4TXT2 Nitrate/nitrite sensor protein NarX n=69 Tax=Enterobacteriaceae RepID=B4TXT2_SALSV Length = 598 Score = 554 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 514/598 (85%), Positives = 543/598 (90%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 M KRC SPLTLVNQ+ALIV+LSTAIG+AGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL Sbjct: 1 MFKRCFSPLTLVNQLALIVMLSTAIGVAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 Query: 61 LAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNR 120 LAAVPL KD+ L+ EMEQTAFS ELTRAAERDGQ QL+ LQDYW NEL P L AQN Sbjct: 61 LAAVPLDAKDQKLLDEMEQTAFSPELTRAAERDGQQKQLKALQDYWHNELSPGLQHAQNA 120 Query: 121 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ 180 V+ DV++FVAGLD+LV+ FD TTE+RIE VVLVHRVMA+FMALLLVFTIIWLR RLLQ Sbjct: 121 HAVAEDVTRFVAGLDRLVTSFDHTTELRIERVVLVHRVMAIFMALLLVFTIIWLRVRLLQ 180 Query: 181 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 PW+QLL+MA AVS RDFTQRANISGRNEMA LG+ALNNMS ELAESYAVLEQRVQEKTAG Sbjct: 181 PWKQLLSMARAVSQRDFTQRANISGRNEMAALGSALNNMSEELAESYAVLEQRVQEKTAG 240 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF 300 LEHKNQILSFLWQANRRLHS APLCERLSPVLNGLQNLT L DIELRVYD +DE+NHQEF Sbjct: 241 LEHKNQILSFLWQANRRLHSPAPLCERLSPVLNGLQNLTQLHDIELRVYDLEDEDNHQEF 300 Query: 301 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ 360 TCQ D++CDDKGC LCPR LP+ + GTTLKWRL DSHTQYGILLATLP GRHLSHDQQQ Sbjct: 301 TCQSDISCDDKGCHLCPRSALPMINGGTTLKWRLTDSHTQYGILLATLPYGRHLSHDQQQ 360 Query: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG Sbjct: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 Query: 421 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV 480 D LPESSR LLSQIRNELN SWAQLRELLTTFRLQLTEPGLRPALEASC+E+SA+FGF V Sbjct: 421 DVLPESSRVLLSQIRNELNCSWAQLRELLTTFRLQLTEPGLRPALEASCQEFSARFGFTV 480 Query: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG 540 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHS A +VVVTV Q QVKL VQDNGCG Sbjct: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSHADDVVVTVTQCGKQVKLKVQDNGCG 540 Query: 541 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE 598 VPENA RSNHYGMIIMRDRAQSLRGDC+VRRRE+GGTEV VTFIPE FT+ QGDTHE Sbjct: 541 VPENAERSNHYGMIIMRDRAQSLRGDCQVRRRETGGTEVTVTFIPETNFTETQGDTHE 598 >UniRef50_B4EWG1 Nitrate/nitrite teo-component system, sensor kinase n=8 Tax=Enterobacteriaceae RepID=B4EWG1_PROMH Length = 609 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 256/591 (43%), Positives = 373/591 (63%), Gaps = 5/591 (0%) Query: 7 SPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPL 66 +++NQ+A+++LL T G+ GMA+S ++ VQG+AHAINK+GSLRMQSYRLL+A+PL Sbjct: 10 YRFSIINQIAILMLLFTLFGVVGMAISNHIILSVQGNAHAINKSGSLRMQSYRLLSALPL 69 Query: 67 SEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSAD 126 +K + ++E+E S EL + +Q L YW+ L P L A+ + Sbjct: 70 DDKHRDYLQELENDLDSKELRQVLSTSSLQSQYVQLTHYWKETLKPTLSAAKQPNDAKQE 129 Query: 127 VSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLL 186 V FV+ LD LVS D+ TE +I V + LLL ++ R RLL PW+QL+ Sbjct: 130 VIFFVSQLDTLVSSIDQLTEQKIRLVAYTQLIFTALTLLLLFGSVWHFRRRLLLPWQQLM 189 Query: 187 AMASAVSHRDFTQRA-NISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKN 245 +MA+++ H DF+ R +E+A LG ALN MS EL+ Y+ LEQRV EKT L+ KN Sbjct: 190 SMANSIGHGDFSTRFRPRPHHDEIATLGIALNTMSEELSTLYSELEQRVIEKTHDLQQKN 249 Query: 246 QILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQP- 304 ++LS+L+ ++++LHS+APLC RL +L LQ++ +++R+Y+ + E + P Sbjct: 250 KVLSYLYHSSQQLHSQAPLCARLRQILAELQHIIPDSYLQIRLYEDNQHTLFNEISLAPS 309 Query: 305 --DMTCDDKGCQLCPRGV-LPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQL 361 C C+ C + L W L D +YG+ + LP+ L+ +Q L Sbjct: 310 SRPEYCPTPDCERCNEDANITTPLNNRLLHWELTDQIHRYGLFVMQLPENSVLTDEQNNL 369 Query: 362 VDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD 421 + L +Q++A LA+++ E+QQQL++M+ER+ IARELHDSIAQSLSC+KMQVS LQMQ + Sbjct: 370 MLLLTKQISAMLAMEQQNEQQQQLLLMDERSAIARELHDSIAQSLSCLKMQVSYLQMQSE 429 Query: 422 ALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVK 481 LP++ ++LL ++R ELN ++ QLRELLTTFRL+LTEPGL ALE + E++ + GF + Sbjct: 430 TLPDNCQKLLKEMREELNVAYRQLRELLTTFRLKLTEPGLLAALENTLNEFNQRLGFAIH 489 Query: 482 LDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV 541 DYQLP + V SHQ+IH++QI REAL+N L+H+ A+ V + N+ V+L + DNG G+ Sbjct: 490 FDYQLPAKCVNSHQSIHVVQIVREALNNILQHANANWAEVALTLNNGIVELQINDNGEGI 549 Query: 542 PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDV 592 N + NHYG+IIMR+RA SL G +R R+ GGT+V VTF T D Sbjct: 550 TPNPEKINHYGLIIMRERANSLNGSYSIRVRKEGGTQVFVTFPLITTHKDP 600 >UniRef50_B2Q6G3 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B2Q6G3_PROST Length = 586 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 252/577 (43%), Positives = 373/577 (64%), Gaps = 5/577 (0%) Query: 8 PLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLS 67 +++NQV ++LL +G+ GM +S ++ VQG+AHAINK+GSLRMQSYRLL+ +PL+ Sbjct: 9 RFSIINQVIGLMLLIAILGIIGMTISNRMIISVQGNAHAINKSGSLRMQSYRLLSLIPLN 68 Query: 68 EKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADV 127 + K + +E S ELT+ + + + L +W L PAL A + +V Sbjct: 69 DHTKEYLDILENDLSSLELTQVVKAEDLTEKFSELHTFWLKTLRPALSEANSASDARYEV 128 Query: 128 SQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLA 187 FV LD+LV D TE +I V + + + LLL+ TI LR ++ PW +LL+ Sbjct: 129 ISFVNMLDELVHDIDEKTERKIAYVAMTQMIFIGLVFLLLMVTIWHLRRKIYYPWMKLLS 188 Query: 188 MASAVSHRDFTQRANISGR-NEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQ 246 MA A+ +DF+QR + + +E+ LG LN MS ELA+SY LE RV EKTA L +KN+ Sbjct: 189 MAHAIGQKDFSQRYPNNNKQDELNTLGLTLNQMSDELAQSYHQLESRVAEKTADLRNKNR 248 Query: 247 ILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDM 306 +LS+L+Q+N+ LHS PL RL VL L+N+T L+++ L++Y+ +E+ E C Sbjct: 249 VLSYLYQSNQILHSTEPLDLRLQKVLGELKNITSLKNLSLKLYEDSNEKYFHEICC---- 304 Query: 307 TCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLV 366 T +D + + TL W L+D+ +YG++ A + +S +Q LV LV Sbjct: 305 TSNDPLSEDPSFIPKDIVHHPKTLLWELSDNMHRYGVISAEIENNEDISEEQNNLVLMLV 364 Query: 367 EQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPES 426 +Q++ LA++ E+QQQL++M+ER+ IARELHDSIAQSLSC+KMQ+S LQMQ ++LP+ Sbjct: 365 KQISGMLAMEHQIEQQQQLLIMDERSAIARELHDSIAQSLSCLKMQISYLQMQPESLPDK 424 Query: 427 SRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQL 486 ++LLS++R E+N +++QLRELLTTFRL+L EPGL P+LE++ E+S K GF + L+Y + Sbjct: 425 HQQLLSEMRGEINTAYSQLRELLTTFRLKLMEPGLLPSLESTINEFSQKMGFKILLNYHI 484 Query: 487 PPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI 546 P + + HQ+IH++QI REALSN LKH+ A+ VT+ Q+ V +T++DNG G+ Sbjct: 485 PAKSISPHQSIHIIQIIREALSNILKHAHANWAQVTLQQDSGVVTITIEDNGEGIAPTPS 544 Query: 547 RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + NHYG+IIMR+RA SL G+C + R GGT+V VTF Sbjct: 545 KQNHYGLIIMRERALSLNGECEIIPRAQGGTKVQVTF 581 >UniRef50_A4TJU9 Nitrate/nitrite sensor protein n=29 Tax=Enterobacteriaceae RepID=A4TJU9_YERPP Length = 593 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 281/590 (47%), Positives = 391/590 (66%), Gaps = 7/590 (1%) Query: 2 LKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLL 61 +KR L+P LVNQ+AL+++L +GLAGM +S W+ Q +QG+AHAIN+AGSLRMQSYRLL Sbjct: 1 MKRYLTP--LVNQIALLMILLGMLGLAGMVISSWMAQSIQGNAHAINQAGSLRMQSYRLL 58 Query: 62 AAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRE 121 + +PL + + +EQ S +L +A R+G + Q Q ++ YW++ L P L +A++ + Sbjct: 59 SMIPLDSNELSYLVALEQDKTSHDLQQALLREGLMGQYQQIERYWQDTLKPQLQQAKHPD 118 Query: 122 TVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQP 181 V+A V+ FV LD LV D TE R+ V L+ V ++ LL+ I +LR RLL+P Sbjct: 119 EVAASVADFVHQLDALVLAIDHKTEQRLLQVTLIPLVFSLLTLSLLLAMIYYLRRRLLRP 178 Query: 182 WRQLLAMASAVSHRDFTQRANISG-RNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 W +L++MA+A+ DF+QR + R+EM MLGTALN MS EL+ Y LEQRV KTA Sbjct: 179 WLKLISMANAIGRGDFSQRYTLDYQRDEMGMLGTALNRMSQELSLIYGDLEQRVVNKTAD 238 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF 300 L+ KNQ+L+FL+ ++R+LH+ PL ERL+PV+ LQ LT L ++++ +Y+ +H Sbjct: 239 LQQKNQVLAFLYHSSRQLHTHQPLSERLAPVIEQLQALTTLENVQICLYENHLYRDHVNH 298 Query: 301 TCQPDMTCDDKGCQLC----PRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSH 356 + P + + +L W L+D QYG+LLA P L+ Sbjct: 299 NADAEYLMPKNRPASLTISGPVRPISHPELWQSLSWSLSDKLGQYGLLLAKQPLDNPLNS 358 Query: 357 DQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL 416 DQQQLVD LVEQLT+TLAL+ + QQQL++MEER+ IARELHDSIAQSLSC+K+Q+SCL Sbjct: 359 DQQQLVDMLVEQLTSTLALESQAKHQQQLLLMEERSAIARELHDSIAQSLSCLKIQISCL 418 Query: 417 QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKF 476 QMQ LPE+S L+ Q+R+ELN ++ QLRELLTTFRL+L E L AL+A E+S + Sbjct: 419 QMQTPDLPENSNLLIKQMRDELNIAYRQLRELLTTFRLKLNEATLEAALQALVNEFSERA 478 Query: 477 GFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQD 536 G + YQLPP VP+HQAIH++ I REAL+N KH++ASE V V V +++ D Sbjct: 479 GLSITFKYQLPPDQVPNHQAIHMVNIVREALNNIYKHARASEATVNVHLEQGDVVMSITD 538 Query: 537 NGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 NGCG+ + + + NHYG++IM+DRA SL G C + ++E GGTEV V F PE Sbjct: 539 NGCGIGQASEQPNHYGLMIMQDRANSLHGHCSINQKEGGGTEVRVQFTPE 588 >UniRef50_A4VHY8 Two-component sensor NarX n=3 Tax=Pseudomonas RepID=A4VHY8_PSEU5 Length = 658 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 194/608 (31%), Positives = 302/608 (49%), Gaps = 16/608 (2%) Query: 7 SPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPL 66 + ++V + ++ L M S +L ++G A AIN+AGSLRMQ+YRL Sbjct: 30 TRHSIVFNTLVAFVVIIGFSLVSMLASLYLADALEGDAEAINQAGSLRMQAYRLAFTAEH 89 Query: 67 SEKD--KPLIKEMEQTAFSAELTRAAERD---GQLAQLQGLQDYWRNELIPALMRAQNR- 120 + + I +E+T SA L A R G+ +W+ + P L R Sbjct: 90 GPQALLEERIDILERTLRSASLRSALHRHGDTPLPGLHGGVLQHWQERMRPLLDAQPPRL 149 Query: 121 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ 180 + + +FV+ LD V +E ++ + + + L+ I L L Sbjct: 150 DDYRREAPEFVSELDVFVRTLQEASEGKLGVIRALQAGTLFIIVLIAFVLIYGLHNNLAT 209 Query: 181 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 P R L MA + DF+ R I G E+++L LN MS ELA YA +EQ+V +KTA Sbjct: 210 PLRSLTKMARDIGKGDFSGRVEIPGDTELSLLARTLNQMSQELAGLYAEMEQKVDDKTAA 269 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSP-VLNGLQNLTLLRDIELRVYDTDDEENHQE 299 L N L L+ + R L+S+ + +L +Q + I L + + + +H Sbjct: 270 LTRSNATLQLLFNSARMLYSQPDDPSLMMGSLLTKVQEVLDTGPISLCLNRSAEAGSHTA 329 Query: 300 FTC---QPDMTCDDKGCQLCPRGVLPVGDRGTTLK-WRLADSHTQYGILLATLPQGRHLS 355 T QP C C++CP G L + L G L P G L Sbjct: 330 MTSSDLQPPDYCKLPQCEVCPVNQSGRLPSGEELVTFELRSGQDDLGSLRVAHPAGEPLE 389 Query: 356 HDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSC 415 Q L+ TL + A+L+L + ++Q +L +MEERA IARELHDS+AQ+LS K+Q++ Sbjct: 390 SWQTLLLTTLADLFAASLSLAQLGQKQARLALMEERAVIARELHDSLAQALSAQKLQLAR 449 Query: 416 LQMQGDALPESSR--ELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYS 473 L+ ++ + + QI LN+++ QLRELLTTFR+++ EPGL+PAL+A+ EE+ Sbjct: 450 LKRLMQKESGQAQLDDSVQQIDRGLNSAYRQLRELLTTFRIKVNEPGLKPALQATIEEFG 509 Query: 474 AKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND-NQVKL 532 A G ++ D+QL + ++ +H LQI REALSN +KH++A + + Q+ + + Sbjct: 510 ANSGLHIESDFQLDHCPLTPNEEVHCLQIIREALSNVVKHAEAEHCWLRLTQDGIGTINV 569 Query: 533 TVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTD- 591 ++D+G G+ R+ HYG+II+R+RA SL G + R GGT V + F P Sbjct: 570 EIEDDGIGIRPEEQRTGHYGLIILRERANSLNGSISIGLRPGGGTRVHLRFPPAYRHIPL 629 Query: 592 -VQGDTHE 598 + THE Sbjct: 630 IQEPVTHE 637 >UniRef50_Q3SJ17 Periplasmic Sensor Signal Transduction Histidine Kinase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJ17_THIDA Length = 644 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 187/625 (29%), Positives = 303/625 (48%), Gaps = 32/625 (5%) Query: 3 KRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLA 62 R +L+ ++ + + T + + M+ S + + +QGS AIN AGSLRMQS+R+ A Sbjct: 17 GRTKLENSLLMRLGGMFVAITVLAVTSMSTSWMVAETIQGSGEAINLAGSLRMQSWRMAA 76 Query: 63 AVPLSEKDK---------PLIKEMEQTAFSAELTRAAERD---GQLAQLQGLQDYWRNEL 110 + D I E +A + D + +++ WR + Sbjct: 77 IYQRLQSDGATEDAEDLGEAIARFEADLKAAPILAVLPSDETTPLWHVYRQVENDWRTVV 136 Query: 111 IPALM-----RAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMAL 165 P L R +V D+ FVA ++ LV + E +I + ++ + L Sbjct: 137 KPGLQVTPAAGRPARGSVLDDIPAFVAHINDLVKQIEDAAEAKILVMRVILGAAVIATML 196 Query: 166 LLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAE 225 ++ I + L+ P R LL +A + + R +++G +E+ LG A N+M+ +L+ Sbjct: 197 VVALAIYLVNNILVYPLRGLLGLADQIGQGNLAVRNDLTGEDEIGRLGQAFNHMAEDLSM 256 Query: 226 SYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIE 285 Y LE RV+EKTA L N+ L L+ + RL++ +L L+N+ L Sbjct: 257 LYQNLEARVEEKTAELTIANRSLELLYHSIARLYNGPIAPRTYEILLKDLENVLGLGHGL 316 Query: 286 LRVYDTDDEENHQEFTCQPDMT------CDDKGCQLCPRGV----LPVGDRGTTLKWRLA 335 + + D + C C C P+GD L L Sbjct: 317 ACLVEGDGATRGRVIASTLPPLPEGADPCSVMSCAECLARPALAVHPLGDGRRVLSLPLN 376 Query: 336 DSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIA 395 D+ YG+L +P G+ L Q QL++ L + + R E+ ++L +++ERA +A Sbjct: 377 DTEQLYGVLQLEMPPGKELVQWQSQLLEALSRHIGIAIGTARRTEQSRRLSLLDERAALA 436 Query: 396 RELHDSIAQSLSCMKMQVSCLQMQGDALPE--SSRELLSQIRNELNASWAQLRELLTTFR 453 R+LHDS+AQSL+ MK+QVS L+ + + ++L+++R LN+++ QLRELLTTFR Sbjct: 437 RDLHDSLAQSLAYMKIQVSRLKPLVEGSGAGSEAGDVLAELREGLNSAYRQLRELLTTFR 496 Query: 454 LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKH 513 L++ GL AL+ + E+S + G P+ L L + ++ IH LQI REALSN L H Sbjct: 497 LRIEGEGLGAALQTTVTEFSNRGGIPITLVVHLAGCKLTPNEEIHALQIVREALSNVLNH 556 Query: 514 SQASEVVVTVAQ-NDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRR 572 +QA + V+V+ +D V TV D+G G+ R++HYGM IM +RA++L G V Sbjct: 557 AQARQAEVSVSCNSDGSVSATVTDDGIGI-HGTARAHHYGMTIMEERAKNLGGRLSVENL 615 Query: 573 ESGGTEVVVTFIPEKTFTDVQGDTH 597 + GT V + F+P D G H Sbjct: 616 AARGTRVALHFVPSTRRED-NGTIH 639 >UniRef50_Q0HUB7 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=2 Tax=Shewanella RepID=Q0HUB7_SHESR Length = 589 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 233/588 (39%), Positives = 351/588 (59%), Gaps = 20/588 (3%) Query: 30 MAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIK-------------E 76 M +S W+ +QGSAHAI++ GS+RM+SYRLL+ +PL + K L+ + Sbjct: 1 MVISSWVSNSLQGSAHAIDEIGSMRMKSYRLLSFLPLENEQKLLLANSPFISKLNIGKNQ 60 Query: 77 MEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQ 136 + + +L ER+ + L YW +L P L+ A+ V FVA LD Sbjct: 61 LNKGEDVVKLKVFLEREDLINDFNDLYQYWNLQLQPTLLSAKTASDARVKVDFFVAKLDN 120 Query: 137 LVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRD 196 LV D TE++++ V VH V LL + +++L+ R+ +PW++LL +A+++S D Sbjct: 121 LVKKIDSNTEVKLKLVSRVHSVFIFLSVLLTIVGVVFLKLRIFRPWQELLRIANSISSGD 180 Query: 197 FTQRANI-SGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQAN 255 F+QR +EM +LG A++ MS +L + Y LE+RVQ+KT + +N LSFL++++ Sbjct: 181 FSQRFRERKYHDEMTILGDAMSCMSTQLRKMYDELERRVQQKTLHIREQNLWLSFLYRSS 240 Query: 256 RRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF---TCQPDMTCDDKG 312 +LHS A C R P+L L+ L ++LR+Y+ ++ N ++F C D Sbjct: 241 NQLHSSASTCLRYFPILKELEELIPFTSMQLRLYEYNNSNNFEQFKTSNTVRPKYCADHE 300 Query: 313 CQLCP-RGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTA 371 C+LC + L+W L D + +YG+++A + L+ Q QLV TLVEQL+ Sbjct: 301 CELCLDKSFSQSTLNCKMLEWPLRDQYGEYGVMIAYCLNDQDLTPLQSQLVKTLVEQLST 360 Query: 372 TLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELL 431 +LAL+ + +QL++M+ERA IARELHDSIAQSLSC+K++VSCLQMQ L L+ Sbjct: 361 SLALEYQDYKNKQLMIMDERAVIARELHDSIAQSLSCLKIKVSCLQMQSKNLGAEQLVLI 420 Query: 432 SQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLV 491 ++R ELN++++ LRELLTTFRL+L EPGL PALE++ EE++ K GF ++L YQLPP V Sbjct: 421 QEMRTELNSAYSHLRELLTTFRLKLNEPGLHPALESTIEEFNKKLGFSIELIYQLPPNCV 480 Query: 492 PSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND--NQVKLTVQDNGCGVPENAIRSN 549 SHQAIHL+ I REALSN KH+ A VV + + N +++ ++DNG G+ + + N Sbjct: 481 SSHQAIHLVHIVREALSNIYKHANADCAVVQLDFDPIHNHIQVVIRDNGIGLSGDMTKVN 540 Query: 550 HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTH 597 HYG+ IM DRA++L G C + +GG EV + F + GD + Sbjct: 541 HYGISIMNDRAKNLPGKCSIDNHLNGGVEVKILFNATYSSLIKNGDDN 588 >UniRef50_Q5E3J3 Sensory histidine kinase in two-component regulatory system with NarP (NarL) n=3 Tax=Aliivibrio RepID=Q5E3J3_VIBF1 Length = 563 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 153/580 (26%), Positives = 277/580 (47%), Gaps = 32/580 (5%) Query: 11 LVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLS-EK 69 L +A ++LL I + +++ + A A+N AGSLRMQSYRL + + + Sbjct: 9 LTRTIAQVMLLIVMISIITTSLALITLSSSLKDAEAVNIAGSLRMQSYRLAYDIETNSPE 68 Query: 70 DKPLIKEMEQTAFSAE---LTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSAD 126 + + Q+ S L + D + ++ W L P+L+ N++ Sbjct: 69 LIEHLDKFSQSIESPSFKSLDQWFVPDDIEDYYEDIRLQWL-SLQPSLLS-DNKQIYLNK 126 Query: 127 VSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLL 186 VS FV +D V +E +++ + L+ + + +F I + + +++ P L+ Sbjct: 127 VSLFVDEIDHFVFRLQEFSERKLQLLSLIGALGLSLIVFSSIFIIFFTQRKIVSPLHHLV 186 Query: 187 AMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQ 246 A + A++ +++ + +++ NE+ LG A N+M+ ++ SY LE RV++KT L N+ Sbjct: 187 AASHAMTKGNYSVQVDLNSDNELGQLGNAFNHMTRQVDLSYRELESRVEDKTKKLSQANR 246 Query: 247 ILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDM 306 L L+Q +++L + + +L+ N+ + I R+ ++ E T Sbjct: 247 SLMILYQCSQQLSASQLDEQAFKNILDTFTNIEGI--ISARLIVEEESGGDWEITSGEPD 304 Query: 307 TCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLV 366 +LC Q G LL L Q+L+ + Sbjct: 305 ESPWSLQELC-------------------IDGEQLGYLLWQ----ESLPCPDQKLIINIS 341 Query: 367 EQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA-LPE 425 L + ++ Q++ QLI++EER+TIARELHDS+AQSLS +K+Q + L+ Q + Sbjct: 342 NILARGIFYNQAQKQTHQLILLEERSTIARELHDSLAQSLSYLKIQTTLLKRQLEKCDCI 401 Query: 426 SSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQ 485 ++ L ++ L ++++QLR LL TFRL + + AL+ +++ + L+ + Sbjct: 402 NTSTTLVELDEGLKSAYSQLRGLLNTFRLTINKAHFGEALQEIMTTLASQTKINIHLNNE 461 Query: 486 LPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENA 545 LP + + Q +HLLQ+ REA NA+KHS+A +++T Q Q + ++D+G G Sbjct: 462 LPSLPINAQQHVHLLQLIREATLNAIKHSKADNIIITCFQEGEQGCINIEDDGVGFDPTE 521 Query: 546 IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 + NHYG+ IM++RA + G + G V V F Sbjct: 522 EKINHYGLRIMQERANCVHGKLSITSEIDNGCTVNVMFPL 561 >UniRef50_A1U593 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Marinobacter RepID=A1U593_MARAV Length = 618 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 204/606 (33%), Positives = 326/606 (53%), Gaps = 24/606 (3%) Query: 7 SPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPL 66 S LVN++A+++ + MA + + ++G+A AIN AGSLRM +++L A Sbjct: 3 SRSPLVNRLAVVIGAIVLTAIVSMATTLAVSNSIEGNATAINLAGSLRMGAFQLAARSAT 62 Query: 67 SEKD------KPLIKEMEQTAFSAELTRAAER---DGQLAQLQGLQDYWRNELIPALMRA 117 + I+ E + R+ R Q + ++ W N+L +L Sbjct: 63 DDPQDSTGTLNQRIEAYEDRLRDPAIIRSIPRTDDHPLAEQYKTVEYSWANQLRQSLESH 122 Query: 118 QNRETVSAD----VSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIW 173 Q +SA+ V ++ +D LVS +R TE RI+ + L+ + VF L+++ + Sbjct: 123 QPGAPLSAEMIAAVEEYTGEVDLLVSMLERRTEARIDLLHLIQIISMVFSVLIVLALFLD 182 Query: 174 LRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQR 233 L+ R+L+P R+L+ +A+AV +DF+ +AN+ G +E+A LG A + M++ELA +Y LE R Sbjct: 183 LKNRILRPLRKLVGIATAVGEQDFSHKANLKGSDELAQLGQAFDQMTSELALTYYELESR 242 Query: 234 VQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDD 293 ++KT LE + L + A+R L + LC P+L L+ L + I L ++D + Sbjct: 243 ARQKTEELEISHAALQVMHSASRGLFANHDLCSGAIPMLQDLEQLLGIGPIRLFLHDKES 302 Query: 294 EENHQEFTCQ---PDMTCDDKGCQLCP------RGVLPVGDRGTTLKWRLADSHTQYGIL 344 E + T C D C C + + G L + G L Sbjct: 303 AEPVEAITTATPKRPFYCRDHHCNACLVTPEVYDEMPLENNDGRRLLLPIRTPGQLLGTL 362 Query: 345 LATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQ 404 P + L ++L++TL +QL + L++ +QQL + EER IARELHDS+AQ Sbjct: 363 EVWYPAEKGLPETSRRLLETLTDQLATAIFLEKQITEEQQLTLAEERTVIARELHDSLAQ 422 Query: 405 SLSCMKMQVSCLQMQGDALPESS--RELLSQIRNELNASWAQLRELLTTFRLQLTEPGLR 462 SLS +KMQV+ L+ + ++L ++ LN+++ QLRELL TFRL+L P L Sbjct: 423 SLSYLKMQVTRLRRLNIDGEQKPIHDDILDELSTGLNSAYRQLRELLATFRLKLDTPDLA 482 Query: 463 PALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT 522 AL + +E+S + G PV +Y LPP+ + ++ IH LQI RE L+NA+KH+ A+++ V Sbjct: 483 TALRKTIDEFSERLGKPVAFEYNLPPQTLSPNEEIHTLQIIREGLANAVKHADATDIAVK 542 Query: 523 VAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVT 582 V + QV+ ++QDNG G+P NHYG+IIM+DRA++L G VR R+ GG EV +T Sbjct: 543 VVFDSPQVRASIQDNGKGLPGGDQPVNHYGLIIMQDRARTLGGKVNVRNRDEGGVEVALT 602 Query: 583 FIPEKT 588 F+P+ Sbjct: 603 FVPKSR 608 >UniRef50_Q2SF45 Signal transduction histidine kinase, nitrate/nitrite-specific n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF45_HAHCH Length = 620 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 169/606 (27%), Positives = 307/606 (50%), Gaps = 25/606 (4%) Query: 5 CLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAV 64 +L+ ++ +++ ++ + M S ++ + + A A+N AGSLRMQSYR+ A + Sbjct: 3 ARFQKSLIFRMGALMIAMVSLAMITMLASFFISESAEKDAEAVNIAGSLRMQSYRMQARL 62 Query: 65 -----PLSEKDKPLIKEMEQTAFSAELTRAAERDGQLA---QLQGLQDYWRNELIPALMR 116 P S+ L ++ + + L A +D Q +++ W N++ + Sbjct: 63 LTLDTPPSDFVAALTRQFAERIENPVLVAEAMKDDSSELHRQFMQVRESWENDVSGFIAT 122 Query: 117 AQNRETVSA------DVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFT 170 + + +FV +D LV + E RIE + L+ L+ F+ Sbjct: 123 YAHNPDRRVADQLGEKIDKFVDEIDNLVQLYQIRAEDRIENLRLIQISALFLTFALVSFS 182 Query: 171 IIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVL 230 ++ L + P R L A ++ DF+ R + +E+ +L N MS L+E Y L Sbjct: 183 LLILHHHVELPLRSLTQNARKIARGDFSDRLEVKNDDELGLLAETFNQMSDALSEMYESL 242 Query: 231 EQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYD 290 E RV+ KT L+ N L+FL+ R + + L L ++T + +EL + Sbjct: 243 ETRVKNKTQALKRSNDSLNFLYHLAREVSEKTHENIDFQAWLEELTSITAVGGVELCLKT 302 Query: 291 TDDEENHQ----EFTCQPDMTCDDKGCQLC--PRGVLPVGDRGTTLKWRLADSHTQYGIL 344 + ++ ++ + +C + C+ C + + + +++ L QYG++ Sbjct: 303 PEAVIPYEHIRNDYMTELPSSCQRQECEKCMVEKAQVCRDNDEVQVRYPLIKEGVQYGVI 362 Query: 345 LATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQ 404 + TL ++L Q QL+ + +Q+ L+L ++++++ +M ER IARELHDS+AQ Sbjct: 363 VCTLRNSQYLESWQHQLLQSFSDQVAVALSLKNQGDQERRVSLMNERNVIARELHDSLAQ 422 Query: 405 SLSCMKMQVSCLQMQGDA---LPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGL 461 SLS +K+QV+ L + E + ++++ + +++ QLRELLTTFRL ++E GL Sbjct: 423 SLSYLKIQVARLTRALQSKQVEDEQIDGITAELKEGITSAYRQLRELLTTFRLSISEKGL 482 Query: 462 RPALEASCEEYSAK-FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVV 520 A+ + E+ + + + LDY++ ++ IHLLQI REAL NA++HSQ + V Sbjct: 483 HAAILHTVEQLTEQSTNVKIVLDYRVEDIPFSPNEEIHLLQITREALQNAVRHSQGNLVT 542 Query: 521 VTVAQND-NQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 V++ + +V L + DNG G+PE+ + NHYG+ IMR+R ++L G+ ++R GGT V Sbjct: 543 VSLHSDPKKKVTLAIIDNGVGIPEDPEKLNHYGLAIMRERTRNLHGELAIQRIPEGGTAV 602 Query: 580 VVTFIP 585 + +F P Sbjct: 603 LFSFTP 608 >UniRef50_Q0A9X9 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A9X9_ALHEH Length = 644 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 196/609 (32%), Positives = 304/609 (49%), Gaps = 24/609 (3%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 + R L P TL + +++ IG GM ++ + Q A AIN AGSLRMQSYR+ Sbjct: 6 LYNRLLHP-TLAGSLFALLVGVATIGFLGMLHGAFVAKTAQHDAAAINVAGSLRMQSYRI 64 Query: 61 LAAVPLSEKDKP-------LIKEMEQTAFSAELTR---AAERDGQLAQLQGLQDYWRNEL 110 + + + + E+ S EL R A D + + W EL Sbjct: 65 ATTLLDDQGPQAGAKTLDAEVAAFERRLHSPELLRPIPANPDDPVREAWEEVHRQWTTEL 124 Query: 111 IPAL---MRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLL 167 P L A + V +FV +D LV+ E RI V + ++ L+ Sbjct: 125 KPLLVDGSSAGSPVRYLDQVDRFVGTVDNLVTAAQSAAEARIHNSQSVRVLAMALLSGLV 184 Query: 168 VFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESY 227 ++ + L RL+ P +QL +A + DF RA +E+ M N M+ L + Sbjct: 185 LYGLYRLHMRLVLPVQQLNYVAGRLMKGDFEARARYLPNDELGMYARTFNRMADTLTDMQ 244 Query: 228 AVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELR 287 L RV EKTA L +N L ++ A+R L + A L +L+ L+ +T L + + Sbjct: 245 RSLAHRVSEKTAELRRRNSALELVYNASRDLSAGALESSNLKAMLDTLERVTGLGPLSIC 304 Query: 288 VYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRG------TTLKWRLADSHTQY 341 + +++ + + + C + V G L L D + +Y Sbjct: 305 LAQPGADKSFETLSTSAESRPARCSAPDCKGCMNVVPRHGGGVVCPGMLALPLEDRNVRY 364 Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 G+L G Q L +T+ + A A +R + + ++++MEERA IARELHDS Sbjct: 365 GLLQVEYTPGDQPRGWQLHLAETVASHIAAACARERELDAEHRIVLMEERAVIARELHDS 424 Query: 402 IAQSLSCMKMQVSCLQ--MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEP 459 +AQ+LS MK+QV+ LQ M+ + P +LS++R+ LN+++ QLRELLTTFRL + P Sbjct: 425 LAQALSYMKIQVARLQGLMRKEHEPAQLEAILSELRDGLNSAYEQLRELLTTFRLGMDSP 484 Query: 460 GLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEV 519 GL AL + +E+S + P++LDY+L + +++ IHLLQIAREAL+N ++HSQA+ Sbjct: 485 GLESALRKAVKEFSERGDIPIRLDYRLSHWPLNANEEIHLLQIAREALANVVRHSQATRA 544 Query: 520 VVTVA-QNDNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 V VA +++ V L V DNG G+ + +HYG IM++RA+ L G R+ R GG Sbjct: 545 DVVVAPGSNHDVVLEVLDNGVGLAAVSEEPGHHYGTAIMQERAEGLGGMLRLGNRAGGGM 604 Query: 578 EVVVTFIPE 586 V++TF PE Sbjct: 605 RVMLTFRPE 613 >UniRef50_B7UUR7 Two-component sensor NarX n=7 Tax=Gammaproteobacteria RepID=B7UUR7_PSEA8 Length = 622 Score = 427 bits (1097), Expect = e-118, Method: Composition-based stats. Identities = 188/600 (31%), Positives = 284/600 (47%), Gaps = 16/600 (2%) Query: 6 LSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVP 65 + +LV + + L ++ L GM + A IN AGSLRM +YR+ P Sbjct: 26 ILRRSLVVRFGCYLTLLVSLALIGMFSALLFADYTHQDAAVINHAGSLRMLTYRVALE-P 84 Query: 66 LSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSA 125 E + L+ + + S ++ R +R ++ L EL L R R Sbjct: 85 SLEGRQALLGTLGERLDSGDIRRLLQRQDADDPIRQLHQ----ELREGLARLDPRALPGR 140 Query: 126 DV-SQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQ 184 V +V +D+ V E R + + V + L++ T+ L ++ P R+ Sbjct: 141 AVLDAYVGDIDRFVGILQAKAERRSQLLSTVQGLCLFLSLLVVFVTLYDLSYHVIGPLRE 200 Query: 185 LLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHK 244 L + A + + R SG +E+A LG N M+ EL Y LE+RV++KT L Sbjct: 201 LTSTARRLGRGELDARVTYSGEDELAQLGERFNQMAGELKSIYGDLEERVEDKTRALSQS 260 Query: 245 NQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTC-- 302 +Q L L+ + RRL L P+LN L+ + + L + E + T Sbjct: 261 HQRLELLYASARRLGENPYDSRTLQPLLNQLEKVLDAGRVTLCLNKDGVERAYSSLTTTE 320 Query: 303 QPDMTCDDKGCQLCPRGVL----PVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQ 358 +P C C C P L L+ + ++G L GR L + Q Sbjct: 321 RPADFCLQGDCGSCREQASACDQPSSLAQPLLMQPLSIAGHRFGELFIESRSGR-LENWQ 379 Query: 359 QQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQM 418 QQL++T + + T AL QE++ +L + ER TIARELHDS+AQSLS +K+QVS L Sbjct: 380 QQLIETFCDNIARTFALSLQQEQESRLALFAERGTIARELHDSLAQSLSYLKIQVSRLGT 439 Query: 419 QG--DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKF 476 +A E + L ++R LN ++ QLRELLTTFRL L EP L AL + E+ + Sbjct: 440 LLKREAPAEKIEDTLDELREGLNGAYRQLRELLTTFRLSLDEPSLEAALGNAVAEFGERG 499 Query: 477 GFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTV-AQNDNQVKLTVQ 535 ++LD +L + ++ IH+LQI REALSN ++HSQA V + +Q D QV + V+ Sbjct: 500 EVTIELDNRLQHVPLSPNEEIHVLQIVREALSNVVRHSQAQRAWVRLSSQADGQVSIAVE 559 Query: 536 DNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGD 595 D+G G RS HYG+ IM++R Q+L R R GT V+ +F+P + Sbjct: 560 DDGVGFDPQQNRSGHYGLTIMQERGQTLGSQLRFEARAPHGTRVLFSFVPTALQPSAAKE 619 >UniRef50_A4G5M3 Putative Nitrate/nitrite sensor protein narX n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G5M3_HERAR Length = 672 Score = 423 bits (1088), Expect = e-117, Method: Composition-based stats. Identities = 149/639 (23%), Positives = 254/639 (39%), Gaps = 57/639 (8%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 M L P L N++ +++ + L+ + + L ++GSA AIN+AG +RMQSYRL Sbjct: 27 MNPFSLLPQRLSNKIVAVLIGFLLLALSAIGTTLMLSWQLEGSAAAINEAGGVRMQSYRL 86 Query: 61 LAAV------PLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQL-----------QGLQ 103 + + + + E + A A R D Q + Sbjct: 87 TSVLARLLNEQIEPDELRHNAEQQIRAIDATFARLQRGDPQRPLYLPPTNNIHTVFAQVV 146 Query: 104 DYWRNELIPA----LMRAQNR-----ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVL 154 + W EL P L +AQ + + FVA ++ LV +R +E R+ + Sbjct: 147 ERWDVELEPLAYAILQKAQPDRRPDWDRYLTQIDGFVADVNNLVQLIERDSETRMFWLRS 206 Query: 155 VHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGT 214 V+ + V I + ++QP +L ++ R + ++E L Sbjct: 207 WQLVLVAMALIGTVTMIYLMFLLIIQPVTRLQEGMQQMNGNKLGVRLPVESKDEFGQLTL 266 Query: 215 ALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNG 274 N M+ L SY LE RV++KTA LE +N+ L+ L+ + L P+ L Sbjct: 267 GFNQMADRLETSYNNLENRVRQKTAELEDQNRELALLYDSAAFLQRPQPMEMLCDGFLQR 326 Query: 275 LQNLTLLRDIELRVYDTDDEENHQEF------TCQPDMTCDDKGCQLC------------ 316 + +RV + + H C G LC Sbjct: 327 ITQYFQADGGSVRVLEAARDNLHMVVHQGISKELVESEHCLKVGDCLCGEAAEKKISMVH 386 Query: 317 --------PRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQ 368 T + + G Q R + L++ L Sbjct: 387 NLQQMDQAHALQCHREGFATVSIFHIYAHEQHIGFFNLHFRQPRVFDKHEHALLEALGNL 446 Query: 369 LTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP-ESS 427 L + R R++++ + EER +A+ LHDSIAQ L+ + +QV L + Sbjct: 447 LGVAIENIRLAMREREMAISEERNLVAQGLHDSIAQGLTFLNLQVQMLDDSLQKGRLKEV 506 Query: 428 RELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLP 487 E++ +R +N S+ +RELL FR +L + L +L+ + +++ + G V Sbjct: 507 AEIVPALRAGVNESYEDIRELLLNFRSRLIKGDLINSLQTTIDKFRRQSGITVNFVASGD 566 Query: 488 PRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN--- 544 +P Q + ++ I +EALSN KH+ AS+V + + Q++ L++ DNG G + Sbjct: 567 GAPLPYEQQLQIMFIVQEALSNIRKHASASKVEIRL-QDNQDFSLSIHDNGGGFDADTLL 625 Query: 545 AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + +H G+ IMR+RAQ + V GT V + Sbjct: 626 SKGESHVGINIMRERAQRIHASFEVHSTPLQGTTVRLQL 664 >UniRef50_D0IAW0 Nitrate/nitrite sensor protein n=3 Tax=Gammaproteobacteria RepID=D0IAW0_VIBHO Length = 594 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 151/587 (25%), Positives = 261/587 (44%), Gaps = 32/587 (5%) Query: 2 LKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLL 61 +K + ++ VA ++ + + + + + A AIN +GSLRMQSYR+ Sbjct: 32 IKNIIVKQSVTTIVARSLIGILFLAVIITGFAIFTLASSLNDAAAINTSGSLRMQSYRMA 91 Query: 62 AAVPLSEKDKP-LIKEMEQTAFSAELT---RAAERDGQLAQLQGLQDYWRNELIPALMRA 117 + L+ P I EQ+ + EL A D + L + W L P L + Sbjct: 92 YDIVLAPSRLPGHIDNFEQSLLAPELRILDNFAVPDEIRERYHSLIERWIK-LRPEL-ES 149 Query: 118 QNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRAR 177 +R V FV +D+ V + +E +++ + +V + L++F I + + R Sbjct: 150 DDRAFYIEQVGLFVNDIDRFVFALQQHSENKLQVLAMVGSGGLGLILALVLFLIQYTQRR 209 Query: 178 LLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEK 237 ++ P L+ + + +R+F + NE+ +L + M++EL YA LE ++ K Sbjct: 210 IVFPLNMLVKASQQIQNREFDAELPPARNNELGVLSNSFALMASELKGLYADLEHKITTK 269 Query: 238 TAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENH 297 T L NQ L+ L+ +++L S E +L N ++ + L+ ++ + + Sbjct: 270 TQKLTKANQSLNILYDCSKQLSSTFLNRESFERMLAITLNADGVKALSLQAHNKNQSDWE 329 Query: 298 QEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHD 357 + G + L +G L Sbjct: 330 IAA---------------------GFPEGGEWFELPLILDGESFGTLKWQGNP----DIV 364 Query: 358 QQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ 417 L+ L L + + Q++ L VMEERAT+ARELHDSIAQSLS +K+Q S L+ Sbjct: 365 DNNLLSNLASILARGVYYNHAQKQAMHLAVMEERATLARELHDSIAQSLSYLKIQTSLLK 424 Query: 418 MQGDA-LPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKF 476 ++ I +L ++ QLRELLT FRL L+ AL E + Sbjct: 425 RHLKLINAPDCNDIAHDISKQLRIAYDQLRELLTAFRLSLSHGDFGLALHEMIETLQGQT 484 Query: 477 GFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQD 536 + + L + + + +H+LQI REA SNA+KH++A + V Q+ +Q ++ + D Sbjct: 485 TATLTVSSDLDTLSMDAQRQMHILQIIREACSNAIKHAKAEHITVRCFQHSHQARVDITD 544 Query: 537 NGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 +G G + +HYG+ IM++R+ L GD ++ G +V +TF Sbjct: 545 DGVGFSLIEEKPDHYGLNIMQERSSMLGGDLKITTAPEKGCQVTLTF 591 >UniRef50_C7RBW7 Histidine kinase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBW7_KANKD Length = 584 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 178/589 (30%), Positives = 281/589 (47%), Gaps = 24/589 (4%) Query: 19 VLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPL----- 73 + + A+ LA + S ++ + + G A IN AGSLRMQS RL A+ + + + Sbjct: 1 MAIIVALALASLITSMFVSESLDGDAAQINVAGSLRMQSIRLSRALTAEQNNLDILNATT 60 Query: 74 ----IKEMEQTAF---SAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSAD 126 I+E E+ S L + + + L+ W ET + Sbjct: 61 ATDEIREFERRLSILLSHGLIANSGNQKIVDIHKVLEQQWFEIKTQVNTNPARFETDYSL 120 Query: 127 VSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLL 186 + QFV +D+LVS +E +I + ++ L + + ++QP L+ Sbjct: 121 IDQFVGTIDRLVSILQSESEKKIRVLRMIQGSALFLTLLTAFIALYRINRSIVQPMNNLV 180 Query: 187 AMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQ 246 A A S +F R + +E+ +LGT N MS L + LE++VQEKT LE N+ Sbjct: 181 AAAKEASKGNFNVRVSDISNDEIGLLGTTFNEMSTRLQIIHNHLEEKVQEKTTKLERSNK 240 Query: 247 ILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDM 306 L L+Q + L RA +L ++ + L + + + Q ++ Sbjct: 241 SLELLYQTSHNLV-RANSRRDFENLLAQVEQTIGDGQVILCLDQKVQNSHQRIPISQHEL 299 Query: 307 T--CDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDT 364 CD C C + + YG L +G+ L+ Sbjct: 300 PKNCDQIHCSQCKIS------NNIRHSFHIHKQDKDYGSLQYFSNKGKP-EQWVHNLLQA 352 Query: 365 LVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP 424 + + + ++LD+ + ++ L++MEERA IARELHDS+AQSLS +K+Q S L Q D Sbjct: 353 IADNIAVAISLDQKRAQENLLLLMEERAVIARELHDSLAQSLSFLKLQTSLLSRQLDKNL 412 Query: 425 ES--SRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKL 482 E + +++ LN ++ QLRELLTTFRLQ+ EP L AL+ + E+S K G+ V+L Sbjct: 413 ERNTIENTIGDLKDGLNNAYRQLRELLTTFRLQIEEPSLESALKGTVAEFSTKCGYEVEL 472 Query: 483 DYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP 542 DY + + + S+Q IH LQI REALSN +HSQAS+ V ++ +V + V DNG G+P Sbjct: 473 DYSITNQTLTSNQQIHALQIIREALSNVQRHSQASKAWVKLSIQGGKVHVEVIDNGIGIP 532 Query: 543 ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTD 591 + HYG+ IM +RA SL + +R+ GT V +T P+ + Sbjct: 533 DEMPEGTHYGLSIMNERAASLNANIDIRKAPPQGTIVEMTLEPQTNTIE 581 >UniRef50_Q47HU2 GAF:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase, dimerization and phosphoacceptor region n=1 Tax=Dechloromonas aromatica RCB RepID=Q47HU2_DECAR Length = 646 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 137/636 (21%), Positives = 262/636 (41%), Gaps = 58/636 (9%) Query: 11 LVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKD 70 L ++ ++++ + + + ++ + ++G A AIN AGS RM++YRL + + Sbjct: 8 LSRKIIGVLVVFFLVATSAIGLTLLISWQLEGVAAAINDAGSQRMRTYRLGHLMARGLEA 67 Query: 71 KPLIKEMEQTA------FSAELTRAAERDGQLA-----------QLQGLQDYWRNELIPA 113 + + + F D +L ++ WR + P Sbjct: 68 ETQVAALTAALSEEVVRFDKVQRDLQLGDPLRPLSSPRNFEVQDRLHDVEQSWRRIIRPL 127 Query: 114 L---------MRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMA 164 + R++ + ++ V G+++LV +R+ + V + + Sbjct: 128 VESYLAGDHQARSEVLDRFDLELEPSVMGINELVLAMERSYAYDTNLLRYVQVALVLLAI 187 Query: 165 LLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELA 224 V I + +++P L ++ D T R ++ +E+ L N M+ L Sbjct: 188 FGTVILIRFFEQLVIRPVSLLHVGMRRMTGNDLTVRVPVTSDDELGGLAAGFNQMAEHLE 247 Query: 225 ESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDI 284 ++Y LEQR++ +T L +N L L+ A L APL L+ ++N Sbjct: 248 DAYGSLEQRIEAETRRLAQRNHELGILYAATSFLSEPAPLEALCEGFLDHIKNALGADAG 307 Query: 285 ELRVYDTD---------DEENHQEFTCQPDMTCDDKGCQLCPRGVLPVG----------- 324 +R+Y + + + + + C + C + P Sbjct: 308 AVRLYVPQTDKLYLMTHEGLSDEFVANEGQLNCGECLCGEVFQSSRPAAFATANPPEGMR 367 Query: 325 -------DRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDR 377 T + + + G+ + + LS + L++TL L + R Sbjct: 368 LRSCIREGFATATAFSILYDKQRLGVYNLYFRRSQALSEQEIHLLETLGHHLGVAIENQR 427 Query: 378 HQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDAL-PESSRELLSQIRN 436 + R+++L V EER +A+ELHDSIAQ L+ + +QV LQ + + + Q+R Sbjct: 428 LKSREKELAVSEERNLLAQELHDSIAQGLAFLNIQVQLLQDSLRKGKADEAMQTAGQLRE 487 Query: 437 ELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQA 496 + S+ +RELL FR ++ + L A+ A+ E++ + G + + +P Sbjct: 488 GVQESYDDVRELLVHFRTRVHQSDLDSAINAALEKFEGQTGIQTEFERIGATTPLPPTDE 547 Query: 497 IHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS----NHYG 552 I ++ I +E+LSN KH++A V VTV Q K+ V+D+G G + H G Sbjct: 548 IQIMHIVQESLSNIRKHAKAKRVRVTVRQELGTSKVMVEDDGIGFDPQNDPNCLSDRHVG 607 Query: 553 MIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 + IMR+RA + G+CR+ G+ V+++ E Sbjct: 608 LKIMRERAHRIGGECRITSNPGQGSCVILSLPKENR 643 >UniRef50_Q8VUK2 Putative nitrate/nitrite sensor protein n=1 Tax=Halomonas halodenitrificans RepID=Q8VUK2_PARHA Length = 644 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 189/611 (30%), Positives = 312/611 (51%), Gaps = 27/611 (4%) Query: 5 CLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAV 64 L +LV ++ +L +A+ L +AV+ + +G A AIN AGSLRM ++++L A+ Sbjct: 2 KLLQHSLVARIVASLLAISAMALVSIAVTMTVANDSRGDAAAINMAGSLRMNTHQILTAL 61 Query: 65 ---------PLSEKDKPLIKEMEQTAFSAELTRAAERDGQLA---QLQGLQDYWRNELIP 112 + L++ E S ELT A A Q + L W ++++P Sbjct: 62 LRYDLHPDAAHDDGVAALVERFETRLASPELTDALPDAADHALRRQHRELLSRWTHDILP 121 Query: 113 ALMRAQNRETVSA-----DVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLL 167 A+ RA+ + V +D LV+ +R +E +I+ ++++ + +++ Sbjct: 122 AINRARAADDRQGPDPAPAFEALVGDIDALVTLLERNSESKIQLLIILQFLFLALTVVVV 181 Query: 168 VFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESY 227 + +R L+ P R LL +A + R+F R + G +E+A+LG +NM+ ELA SY Sbjct: 182 AIALYDIRHNLVTPLRHLLVLAREAARRNFGYRTHFRGNDELALLGRTFDNMAEELATSY 241 Query: 228 AVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSR-APLCERLSPVLNGLQNLTLLRDIEL 286 A LE K A LE N+ + + +R L+ LC +P+L L+ L + I L Sbjct: 242 AELEAHASLKQAELERSNRAMQVMHDGSRALYGGGNDLCASAAPMLRQLEQLLDVGPIRL 301 Query: 287 RVYDTDDEENHQEFTCQPDMT---CDDKGCQLCPRGVLPV----GDRGTTLKWRLADSHT 339 + D D+ C D C C P+ +G L ++ Sbjct: 302 SLNDPHDDRQIPILATHSPHRPEYCRDHECHACLIDPQPLKLEQAQQGECLLLPVSVGEL 361 Query: 340 QYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELH 399 G L + + LS ++L++ L +QL + L R E QQQ+ +M ER IARELH Sbjct: 362 MLGTLEVWHSRSQPLSDSVRRLLNALADQLATAVYLQRRIEEQQQVTLMNERTIIARELH 421 Query: 400 DSIAQSLSCMKMQVSCLQMQGDALPESSRELL--SQIRNELNASWAQLRELLTTFRLQLT 457 DS+AQSLS +KMQV+ L+ R+ ++R L++++ QLRELLTTFRL+L Sbjct: 422 DSLAQSLSYLKMQVARLERMQQKEAPRERQAAVFDELRTGLDSAYRQLRELLTTFRLKLE 481 Query: 458 EPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQAS 517 PGL AL + E+ + G+PV L+ +PP L+ ++ IH+LQ+ REAL+N LKH+ A Sbjct: 482 GPGLASALHQTAREFGKRLGYPVILEVDVPPHLLNPNEEIHVLQVVREALANVLKHANAH 541 Query: 518 EVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 +T+ + ++ + ++D+G G+ +++ HYG++IMRDRA +L G+ + R GGT Sbjct: 542 WAAITINFQEARLHVVIEDDGIGLDDDSSPPMHYGLVIMRDRADTLGGEMTLHNRPGGGT 601 Query: 578 EVVVTFIPEKT 588 + + F P+ Sbjct: 602 RLALVFTPQTA 612 >UniRef50_Q9F0Y0 Nitrate/nitrite sensor protein n=1 Tax=Pseudomonas fluorescens RepID=Q9F0Y0_PSEFL Length = 599 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 163/595 (27%), Positives = 273/595 (45%), Gaps = 10/595 (1%) Query: 7 SPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPL 66 +L + L V+L + LA +G + QG A AIN AGS+RM++Y L + Sbjct: 5 LRSSLPARAGLAVILIAILALASSLSAGLIAWFSQGDAAAINTAGSVRMETYHLSWKLAA 64 Query: 67 --SEKDKPLIKEMEQTAFSAELTRAA---ERDGQLAQLQGLQDYWRNELIPALMRAQNRE 121 ++ +I ++Q S L + L W L PA+ R + Sbjct: 65 GANDDIPAIIASLQQRLDSPALRAVLEDGPETSLHKSYRDLMQRWNQTLRPAIERGDSAF 124 Query: 122 TVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQP 181 S+ S V LDQ V+ R +E + + + ++L+ + L+ ++ P Sbjct: 125 FQSSASSF-VEQLDQFVTLLQRQSEHKQGWQQAIQGIALFSTMIILLIGLYELQYGVVTP 183 Query: 182 WRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGL 241 ++L+ +F R N +E+ L T+ N M+ + +S+ LE +VQ+KT L Sbjct: 184 LQELVDATQRFRRGEFQVRVNHQSEDELGQLATSFNTMAETIEQSHRTLEAQVQQKTLNL 243 Query: 242 EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFT 301 + N L L+Q++R L +R E L ++ Q + L + Sbjct: 244 QQANAALELLYQSSRSLATRQANAEGLDELIRRFQQRLPGLRLTLCLQGQLQAPAKHLLA 303 Query: 302 CQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQL 361 + C + + +++ T+ G L A G + L Sbjct: 304 LHG--AASRQVCASSDCASCHKHNAARPQAFSISNQGTELGELKAHFVDGHAAQPWETAL 361 Query: 362 VDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD 421 + L + +L+L R +E+ +L++++ER IARELHDS+AQ+LS MK+QVS +Q Sbjct: 362 IQALANLIGTSLSLKRQREQDHRLLLLDERTIIARELHDSLAQALSYMKLQVSRMQTLMR 421 Query: 422 ALPE--SSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFP 479 + + ++R LN ++ QLRELLTTFRLQ+ + GL L+ + EE+S + F Sbjct: 422 RGEPVQTLETVTGELREGLNNAYRQLRELLTTFRLQIRDDGLVQELKDTAEEFSNRGDFQ 481 Query: 480 VKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGC 539 V L + + + IH+LQI REALSN L+H+ A + + Q V+L+++D+G Sbjct: 482 VHLFIDTLAFELSASEQIHILQITREALSNCLRHAHAENAWLELRQEGETVRLSIEDDGR 541 Query: 540 GVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQG 594 G + H+G+ IM +RA+SL G ++ R GT + F PE +G Sbjct: 542 GFSGEVDQCEHHGLNIMNERARSLHGQLQIHSRPPHGTRIQAHFQPEFLGHPTEG 596 >UniRef50_A7JYP2 Histidine kinase domain protein n=7 Tax=Vibrio RepID=A7JYP2_VIBSE Length = 584 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 158/586 (26%), Positives = 275/586 (46%), Gaps = 32/586 (5%) Query: 7 SPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPL 66 ++ +A +LL + +A + + + A A+N AGS+RMQSYRL + + Sbjct: 11 VKKSVTRTIASAMLLILLLSVATTGFAIFTLASSLNDAEAVNVAGSMRMQSYRLANDIQV 70 Query: 67 SEKD-KPLIKEMEQTAFSA---ELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRET 122 D I E + +S L + + L W + +++R N Sbjct: 71 KSVDYSSHIDAFEHSIYSPSMKALQHWSVPEDITHDYYRLIMRWHE--LKSVLRGDNPAE 128 Query: 123 VSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPW 182 V+ FV +D+ V +E ++ + + + + + +F + ++R +++P Sbjct: 129 YQLLVAGFVKQIDEFVFKLQSFSEQKLINLAWIGGLGLGGILCVSMFVVHFVRLEVVRPL 188 Query: 183 RQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLE 242 R L+ + + +R F ++S NEM +L N M+ +L + Y LEQ V EKT L+ Sbjct: 189 RALVFASEQIKNRSFNISLDVSSDNEMGILTRTFNRMATDLGKLYRGLEQAVDEKTRKLQ 248 Query: 243 HKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTC 302 H NQ L L+ +++ L + + +L + +L ++ ++L + + Sbjct: 249 HANQSLEVLYDSSKELTASRINQDNFQAILQHIASLEGIKAVKLEIEQ----LGEPSWIL 304 Query: 303 QPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLV 362 C + C L G L L + L+ Sbjct: 305 MEGEECCHDCDEDCHSKA-------------LTLDGEHLGYLYWK----AGLPCPNEALI 347 Query: 363 DTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA 422 D V+ L+ + +R Q + +Q+++MEERATIARELHDS+AQ+LS +K+QV+ L+ Sbjct: 348 DNFVQILSRAVYYNRAQRQAEQILLMEERATIARELHDSLAQALSYLKIQVALLKRSVKN 407 Query: 423 LPE-----SSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFG 477 LP+ + ++++++ L+A++ QLRELLTTFRL + E AL+ E + + Sbjct: 408 LPDEKAIAQANQVIAELDTGLSAAYTQLRELLTTFRLTIKEGSFGQALQDMVETLNEQTV 467 Query: 478 FPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDN 537 + L +L + +HQ +HLLQ+ REA NA+KH+QA + + ND +V +TV D+ Sbjct: 468 ADITLKNRLSSTELDAHQQVHLLQLIREAAINAIKHAQADNIHIQCLDNDGKVTVTVTDD 527 Query: 538 GCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 G G + NHYGM IM++RA L D + + G V + F Sbjct: 528 GIGFEHQDEKLNHYGMSIMQERAARLHADLHIEASINKGCTVKLEF 573 >UniRef50_Q5NYZ8 Nitrate/nitrite sensor kinase n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NYZ8_AZOSE Length = 651 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 152/640 (23%), Positives = 256/640 (40%), Gaps = 64/640 (10%) Query: 6 LSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVP 65 +L ++ I+L+ + L + ++ ++ ++G+A AIN AGSLRM++YR+ + Sbjct: 3 RLRNSLATKITGILLVFFLVALTAIGLTLFISWQLEGAAAAINDAGSLRMRAYRIDHLLA 62 Query: 66 LSEKD------------KPLIKEMEQTAFSAELTRAAER--------DGQLAQLQGLQDY 105 K + E+ EL R R +G A L + ++ Sbjct: 63 RGPAATSNDPMAFTASLKSEFDDFERVF--GELRRGDPRRPLFIPRDNGIPADLDEMAEF 120 Query: 106 WRNELIPALM----------RAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLV 155 W + P L R V FV+G++++V +R+ + + Sbjct: 121 WSLRIRPVLADLIATSDPERRRPGLAEFDRTVKSFVSGINEVVLKMERSYARNTDILRAS 180 Query: 156 HRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTA 215 + + + I + ++QP +L + DF R + +E L Sbjct: 181 QVSLIALAIIGTLVLIRFFFVLVIQPVCELQDGMKRMEQEDFNARVPVLASDEFGELSEG 240 Query: 216 LNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGL 275 N M+ L YA LE+RV KT LE KN+ L L+ L + + L + Sbjct: 241 FNRMAVHLQGLYATLEERVAAKTRSLEGKNRELEILYDIGAFLREPSDVDSLCRGFLQRV 300 Query: 276 QNLTLLRDIELRVYDTDDE---------ENHQEFTCQPDMTCDDKGCQLCPR------GV 320 Q R+ D+ E + + + + C + C R Sbjct: 301 QATFGAGASSARLLDSGSENLCLTVHNGLDREFIDREAVLQCGECLCGEAVRRGTSLVSE 360 Query: 321 LPVGDRGTTLKW------------RLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQ 368 L D TL + + GI R LS + L++TL +Q Sbjct: 361 LSAPDPALTLSVCRRAGFQVITATAITANKQTLGIYNLYFVGARPLSDSDRLLLETLGQQ 420 Query: 369 LTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPE-SS 427 L + R Q ++ V EER +ARELHDSIAQ L+ M +QV L+ D + Sbjct: 421 LGIAIENQRLQASGREHAVSEERNLLARELHDSIAQGLAFMNLQVQMLESALDRNEAGEA 480 Query: 428 RELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLP 487 R+ L+ +R + S+ +RELL FR ++ + L A+ A+ + + G LD Sbjct: 481 RDTLAMLRQGVQESYDDVRELLVHFRTRVEKQDLALAITATLRRLAEQTGIATDLDVLGD 540 Query: 488 PRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN--- 544 + + +L + +EALSN KH+ A V V + + + + + V+D+G G E Sbjct: 541 AAPLDAEAETQVLYVVQEALSNVRKHANARSVKVVIRRGIDGLSVVVRDDGVGFDEADRS 600 Query: 545 -AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 A + H G+ IMR+R + G +R GTE+ V Sbjct: 601 TAAQEAHIGLEIMRERTLRIGGRFSIRSARGKGTEIRVEL 640 >UniRef50_B4S080 Signal transduction histidine kinase, nitrate/nitrite-specific n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S080_ALTMD Length = 588 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 178/580 (30%), Positives = 308/580 (53%), Gaps = 19/580 (3%) Query: 30 MAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKD----KPLIKEMEQTAFSAE 85 M + ++ G Q A A+N AGSLRMQ+YR+ + + S D L+ E + T + Sbjct: 1 MFTTVFMSDGAQFDAQAVNVAGSLRMQTYRIHSVMQDSPGDIETINQLVDEFDLTLNTGV 60 Query: 86 LT--RAAERDGQLAQLQGLQDY-WRNELIPALMR-----AQNRETVSADVSQFVAGLDQL 137 L +A +G +A+ + W ++ + + + + ++ V ++ L Sbjct: 61 LVNQQALWDNGDIAKHHAIVANNWNEQVKQLIQTNLASPSNSNTSSLEVFNKLVEDIELL 120 Query: 138 VSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDF 197 V + + E+ I + LV + +L+ ++ + + QP +L ++A + DF Sbjct: 121 VVAYQKYAEINIANIRLVQSLALFSTLILIAIAMMIVHRHIEQPLSKLTSVARQIGQGDF 180 Query: 198 TQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRR 257 T RA +G+ E+A+L +N MS L S + LE++++ KT L NQ L L+Q +RR Sbjct: 181 TARAEETGKGELALLARTINKMSGSLYRSKSQLEEQIKRKTRKLTRSNQSLELLFQVSRR 240 Query: 258 LHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQP---DMTCDDKGCQ 314 L+ P P+LN L ++T ++D++L + ++ C + C Sbjct: 241 LNEVEPGSADFQPLLNKLADVTGVKDLDLCIMTAQGTGPYEHLMSSEKTIPDKCQQQLCH 300 Query: 315 LCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLA 374 C +K++L YG+L+ +L +G L Q QL + + EQ+ L+ Sbjct: 301 DCTEHDSLFPPVNGQMKYQLNIGDQHYGVLVVSLDEGSILEDWQHQLFEAIAEQVANGLS 360 Query: 375 LDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQM--QGDALPESSRELLS 432 + E+++++ +M ER IARELHDS+AQ+LS +K+QV+ LQ Q ++ E +++ Sbjct: 361 MKHQNEQRRRIALMNERTVIARELHDSLAQALSYLKIQVTRLQRLQQKESAQEQIDQVID 420 Query: 433 QIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKF-GFPVKLDYQLPPRLV 491 +++N L A++++LRELLTTFRL+L G++ ALE + + + F L+Y + Sbjct: 421 ELKNGLGAAYSELRELLTTFRLKLDGQGIKAALEQTISQLQNRSDDFNFTLNYHVSNIPF 480 Query: 492 PSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND-NQVKLTVQDNGCGVPENAIRSNH 550 + IHLLQIAREA NA HSQ + +++ N ++V LTV+DNG G+PE+ + NH Sbjct: 481 TPQEEIHLLQIAREATQNAFYHSQGFNIDISITSNSLSEVILTVKDNGIGIPEDPNKLNH 540 Query: 551 YGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFT 590 YG+ IM++R+++L G+ V+R + GT V+ +FIPE T Sbjct: 541 YGLAIMKERSRNLDGELSVKRNDERGTTVMFSFIPEYART 580 >UniRef50_Q7NV12 Transmembrane nitrate/nitrite sensor kinase transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NV12_CHRVO Length = 632 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 152/605 (25%), Positives = 253/605 (41%), Gaps = 44/605 (7%) Query: 25 IGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSA 84 + L + + L ++G A AIN GSLRM+++R + S + + E F Sbjct: 28 VALISIGYTLALSWRLEGGAAAINDVGSLRMRTFRAAYLM--STQAPERVLRDEVAGFDQ 85 Query: 85 ELTRAAERDG-----------QLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAG 133 L R D Q + L+ WRN++ P L+ A + + + FVA Sbjct: 86 TLARLKRGDPARPLFLPDNRDIRDQERRLEQRWRNDIRPLLLAADGAQPSAQRLHGFVAE 145 Query: 134 LDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVS 193 +D LVS +R E + + V+ V L ++ P R L + Sbjct: 146 IDNLVSLLERDNENHTNLLRMFQMVLIAMALAGAVTMAYMLFLMVINPVRALSDAMRRLR 205 Query: 194 HRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQ 253 + R + ++E+ ML N M+ + Y LE +V +KT +E +N L L+ Sbjct: 206 EGELDTRVKVDRQDELGMLAEGFNQMAERAQDLYQNLESKVAQKTREVEEQNLRLKTLYD 265 Query: 254 ANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF------------T 301 LH + L E + L LT R+ D + + Q Sbjct: 266 MTSFLHQQRALDETCQGFIRRLMQLTGADAANARLVDPERGKLDQIAQQGLPAEMALNEE 325 Query: 302 CQPDMTCDDKGCQLCPRGVLPV--------------GDRGTTLKWRLADSHTQYGILLAT 347 C PD C P VL + + + + GI Sbjct: 326 CIPDDACHCGEAVQQPFAVLRHIGELEGEEIRHCRKAGFASIAVFHIRNQREDVGIFTLY 385 Query: 348 LPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLS 407 Q R LS +Q L++TL + L + R ++Q V EER +A+ LHDSIAQSLS Sbjct: 386 FRQKRVLSMAEQMLIETLGQHLGVAIENQRLGAVERQFAVSEERNLMAQGLHDSIAQSLS 445 Query: 408 CMKMQVSCLQMQGDALPES-SRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALE 466 + +Q L+ ++ E+ +RE L+ IR + + +RELL FR ++++ A+ Sbjct: 446 FLNLQTQMLEDAMNSREEALARENLAFIRAGVQECYEDVRELLLNFRTRISQQEFPEAVR 505 Query: 467 ASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN 526 + + + P +L+ + + + Q + + I +EALSN KH++ASEV V + Sbjct: 506 TLLQRFEQQTRVPARLEMRGEGKPLDPQQQLQVFFILQEALSNIRKHAEASEVEVEIDNT 565 Query: 527 DNQVKLTVQDNGCGVPE---NAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + + ++DNG G A + H GM IM++RA+ + ++R + GT V +T Sbjct: 566 AS-FSMRIRDNGRGFDSGQLAAKSARHVGMSIMQERAKRIHSHIQIRSAPTQGTTVELTL 624 Query: 584 IPEKT 588 E+ Sbjct: 625 PKEER 629 >UniRef50_C4GHV1 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GHV1_9NEIS Length = 578 Score = 413 bits (1062), Expect = e-114, Method: Composition-based stats. Identities = 141/594 (23%), Positives = 264/594 (44%), Gaps = 31/594 (5%) Query: 5 CLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAV 64 L P +LV+++ L+V ++++ L ++G A A+N G LR Q+YRL + Sbjct: 3 RLIPKSLVSRLTLLVTTWLISAFIAISITMLLSLRLEGGAAAVNDTGGLRYQTYRLRLYL 62 Query: 65 PLSEKDKPLIKEMEQTA----FSAELTRAAERDG--QLAQLQGLQDYWRNELIPALMRAQ 118 + K + LI+ +QT S L+ LQ YW ++ P Sbjct: 63 NDTSKVQSLIQTFDQTLARLHHSDPTRPLNLPQDRSIQQHLKLLQQYWETQIKPQYQSPN 122 Query: 119 NRETVSAD--VSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRA 176 + + + FVA +D L + ++ + + + V + ++ TI+ L+ Sbjct: 123 PNLALLDNHLIPNFVASIDSLTRTIEHNNAYYVQWLRVFQTALMVLIFVVSGITIVLLKI 182 Query: 177 RLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQE 236 +++P + L +A+ + F + E A++ N MS+ LA Y LEQ+V E Sbjct: 183 WIIRPLKNLETGVAAIQNSQFGEHIPEDNSTEFAIVDNGFNRMSSHLARLYGKLEQQVAE 242 Query: 237 KTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEEN 296 KT L KN L+ L+ + L+ + + L + LT ++ V++ Sbjct: 243 KTQDLVRKNHTLNTLYTVAQELNQTQTIRQAAQTFLPHILALTPAEAADVSVHNNLIARQ 302 Query: 297 HQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSH 356 + + P T +++ + T G L+ Q + + Sbjct: 303 SKR------------------QPETPPSLPPFTQSFKIRANETTLGTLVLYYNQRQPENP 344 Query: 357 DQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL 416 LV TLV QL + ++ E +Q V++ER TIA+ LHDSIAQSLS + +Q L Sbjct: 345 -DGGLVQTLVHQLALAIHNNQLAEESRQYAVLQERNTIAQGLHDSIAQSLSYLSLQTQML 403 Query: 417 QMQGD-ALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAK 475 + ++++E L I+ + + +RELL FR ++T+ + A+E + + + Sbjct: 404 ENAWANQETQAAQENLQSIKTGIQECYDDVRELLQNFRTKITQKNINEAIETLAQRLAEQ 463 Query: 476 FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQ 535 V ++ + Q + + I +E+LSN KH+QA V + + + LT+ Sbjct: 464 SHIRVHTEWHGNGAPLTPSQQLQFIFILQESLSNIRKHAQAQNVTIRIDNQQDY-TLTIT 522 Query: 536 DNGCGVPENAIRS-NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 D+G G + R+ +H G+ IM++RAQ +R ++ +++ T + +T ++ Sbjct: 523 DDGIGFNPHTERTDDHIGLNIMQERAQRIRARLSIQSQQNH-TRIQLTLPKKER 575 >UniRef50_Q5QWJ9 Nitrate/nitrite sensor histidine kinase n=1 Tax=Idiomarina loihiensis RepID=Q5QWJ9_IDILO Length = 598 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 185/591 (31%), Positives = 311/591 (52%), Gaps = 16/591 (2%) Query: 9 LTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAV---- 64 +++N + + L + A + WL++ + A IN AGS RM++Y+ + Sbjct: 5 ASIINVFRVSLALIVIVASASSLSAFWLLEKSEQDAELINVAGSHRMKAYKFALQLSSGK 64 Query: 65 --PLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWR--NELIPALMRAQNR 120 SE + + EQ +A QLA + + W+ + I A+ Sbjct: 65 KVQASETAQEIDTLWEQPLLHRHFVKAGGSIQQLA--KDARTEWQRVHSEIAEQDFARFS 122 Query: 121 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ 180 + S + +V LD LV +E R+ETV + + F+ + F + L+ ++ Q Sbjct: 123 QQQSNAIDNYVNQLDTLVGQLQEHSERRMETVRSSLALASFFIVAIFFFLLTVLKRKINQ 182 Query: 181 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 P R LLA++ + DFT ++ I +E+ L +N MS ++ Y LE+RV+++T Sbjct: 183 PLRHLLAVSKRLGQGDFTAKSKIDNEDEIGQLSRTMNKMSETVSYFYGGLERRVEQQTQE 242 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF 300 L KN++LSFL+ R + + V+ L + + DIEL + + + Sbjct: 243 LSRKNKVLSFLYDTARSIIVHSYDYNNYQQVIEKLYEIGEVNDIELCLLTEEGNRPFLQL 302 Query: 301 TCQPDMT--CDDKGCQLC--PRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSH 356 +P C+ C C V + ++ L YG+L+ QG+ L+ Sbjct: 303 QPRPSSHEPCEAGDCATCLKAGPGASVIEDKLVYRFVLKREDQNYGVLIVRCEQGQPLAT 362 Query: 357 DQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL 416 QQQL+ + +QL + +L +E+ ++L +M ER IARELHDS+AQ+LS +K+QV+ L Sbjct: 363 WQQQLMSSTADQLALSQSLKSEEEQVRRLALMHERTVIARELHDSLAQALSYLKIQVTRL 422 Query: 417 QMQGDALPESSRELL-SQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAK 475 + ++ + + +++R LN+++ QLRELLTTFRL++ GL AL+ + ++ + + Sbjct: 423 HKGIEKNDRATIDDVSNELREGLNSAYRQLRELLTTFRLKVDGSGLYSALQTTVKQLTEQ 482 Query: 476 FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ-NDNQVKLTV 534 V LDY+L + H+ IHLLQI REA NA+ HSQ SEV ++++Q + V+L + Sbjct: 483 SNMVVHLDYRLNNIPLVPHEEIHLLQIIREASQNAVNHSQGSEVHISLSQPSGQDVELKI 542 Query: 535 QDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 D+G G+PENA + NHYG+ IM++R+++L G+ ++ R ESGGTEV TF P Sbjct: 543 TDDGIGLPENAEKVNHYGLAIMQERSRNLGGEIKISRLESGGTEVCFTFTP 593 >UniRef50_Q2C653 Hypothetical nitrate/nitrite sensor protein NarQ n=2 Tax=Photobacterium RepID=Q2C653_9GAMM Length = 563 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 152/590 (25%), Positives = 281/590 (47%), Gaps = 33/590 (5%) Query: 2 LKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLL 61 + R +L +A ++L I + A++ + Q AIN AGSLRMQSYRL Sbjct: 1 MNRKKKTHSLTTTIARSLVLILIISIVTTALALTTLVSSQNDVEAINIAGSLRMQSYRLA 60 Query: 62 AAVPL-SEKDKPLIKEMEQTAFSAE---LTRAAERDGQLAQLQGLQDYWRNELIPALMRA 117 V S I++ E + +SA L+ + W +L P L R Sbjct: 61 FDVETKSPLLSAHIEQFEHSLYSAPMKGLSYWLISSEIQQHYNHIVLRWE-DLHPILER- 118 Query: 118 QNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRAR 177 N V+ FV ++ V+ +++E++++ + ++ + + L++ +TI + R + Sbjct: 119 DNNTVFIQHVAPFVHRINTFVAELQKSSELKLQRLAIIGVIGVSLIFLIVFYTIRYTRQQ 178 Query: 178 LLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEK 237 ++ P L+ V ++F + NE+ +L + MS++L + Y LE+ V EK Sbjct: 179 IVAPLNDLVDACKQVKRKNFRLDLLNNSNNELGILAHTFSKMSSDLEQLYQGLERSVNEK 238 Query: 238 TAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENH 297 T L H N+ L L+ +++L + + +L + + L +L + + + ++ Sbjct: 239 THRLRHANESLQVLYNCSQQLSVSHLTRVQFTNMLETMIAIDGLIGAKLIIEEPNGSTSN 298 Query: 298 QEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHD 357 + Q G + G+ L W+ L Sbjct: 299 IKVGQQA-------GQHWQYNELYIDGELMGQLWWQ------------------YSLPCP 333 Query: 358 QQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ 417 + L++ + + L + +R Q++ + L++MEERATIARELHDS+AQSLS +K+Q++ L+ Sbjct: 334 DKALINNISQILARAIYYNRAQKQAEYLLLMEERATIARELHDSLAQSLSYLKIQLALLK 393 Query: 418 MQGDALP--ESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAK 475 + + E++ + + I L+ ++ QLRELL+TFRL + + AL E + Sbjct: 394 RELNQNAQNENTHQAVYDIEAGLSNAYTQLRELLSTFRLAIKDANFGEALNQMLEPLEEQ 453 Query: 476 FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQ 535 + +D Q+ + +H +HLLQI REA+ NA+KH+ A E+ V Q + +++T+ Sbjct: 454 TDALLIIDNQISSMALDAHNQVHLLQIIREAVLNAIKHADADEITVNCQQTEQHIQVTII 513 Query: 536 DNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 D+G G + +HYG+ IM++RA L+G +++ G+ + + F Sbjct: 514 DDGKGFDIKDSKRDHYGLNIMQERASRLQGKLKIQSGIDQGSAICLRFPL 563 >UniRef50_C0DXB9 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXB9_EIKCO Length = 632 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 145/627 (23%), Positives = 260/627 (41%), Gaps = 49/627 (7%) Query: 9 LTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSE 68 +L ++ L+ LL I +A ++ + L ++GSA AIN GSLR++S+R+ + + Sbjct: 5 KSLSVRLKLLTLLWLVIAVASISYTLLLSWRLEGSAAAINDIGSLRLRSFRIALLIRENA 64 Query: 69 KDKPLIKEMEQTAFSAELTRAAERDGQL---------AQLQGLQDYWRNELIPALM--RA 117 + + + ++Q + R +R L + L WR + PA Sbjct: 65 GAEEIEQRLQQYDSILDNVRHGDRSRPLFLPPDKVVWQRFNELDQQWRQNIRPAFQVAYQ 124 Query: 118 QNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRAR 177 QNR + F++ LD LVS ++T I + L + V + + F + L Sbjct: 125 QNRPVTDKQLQPFLSRLDNLVSAVEQTNTRYISWLRLFQSCLLVLVVMSSAFMVFLLYWW 184 Query: 178 LLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEK 237 +++P + L +A+ F + I E A + N MS+ L + Y+ LE+ V EK Sbjct: 185 IIKPLQHLQQGVAAIHDGQFGIQIPIDHSAEFARVDNGFNQMSSSLHQLYSHLEEEVLEK 244 Query: 238 TAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENH 297 T L K+ L L+ +R L E L + + +R+ D + Sbjct: 245 TRDLASKHHTLETLYFFSRFLSQTQTTTEAAEVFLQKMLEMVAADAGSIRLIDFKRQRMD 304 Query: 298 QEFTC-QPDMTCDDKGCQL---CPRGVLPVGDRGTTLK---------------------- 331 PD + CQ C G V D ++ Sbjct: 305 LVSQINLPDSLQTAEACQRFDDCLCGHAVVHDDWQPIQFVREPDSHAFDTDNSECSRMGF 364 Query: 332 -----WRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLI 386 +++ +G++ Q ++ +L + L Q ++ R + +QL Sbjct: 365 QQLRIFKIQYKAQDFGMVTLYFKQKEPVAMADTELWEALCSQFGVVVSNLRLIDESRQLA 424 Query: 387 VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD-ALPESSRELLSQIRNELNASWAQL 445 V++ER IA+ LHDSIAQ+L+ + +QV L+ E E L I++ + + + Sbjct: 425 VLQERNLIAQGLHDSIAQALTFLNLQVQMLESALQNHEQEQINENLHYIKDGIQECYDDV 484 Query: 446 RELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 RELL FR ++ ++ + + + V L + + S Q + ++ I +E Sbjct: 485 RELLINFRTKINNKDFTEVVQTLTDRFQRQTQIGVHLHWHGNGPQLNSEQQLQVVFILQE 544 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR----SNHYGMIIMRDRAQ 561 +LSN KHSQA++V + + V + ++DNG G ++ NH G+ IM +RAQ Sbjct: 545 SLSNIRKHSQATQVDIRFNNRQDFV-MEIEDNGRGFNIERLKEQHSGNHVGLNIMHERAQ 603 Query: 562 SLRGDCRVRRRESGGTEVVVTFIPEKT 588 +R + + T V + E+ Sbjct: 604 RIRAQLSLHSKPGS-TRVTLNLPYEER 629 >UniRef50_A5EZZ3 Nitrate/nitrite sensor protein NarQ n=51 Tax=Vibrionales RepID=A5EZZ3_VIBC3 Length = 583 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 152/588 (25%), Positives = 266/588 (45%), Gaps = 36/588 (6%) Query: 4 RCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAA 63 +L +A +LL + V+ + A A+N +GS+RMQSYRL Sbjct: 11 FTPVRHSLTRTMAKAMLLILFLSALTTGVAIVTLASSLNDAEAVNVSGSMRMQSYRLAYD 70 Query: 64 VPLSEKD-KPLIKEMEQTAFSA---ELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQN 119 + D K I E + +S L L + W ++ + Sbjct: 71 IQTQSHDYKAHIFLFENSLYSPSMLALLDWTVPSDIQQDYYQLIERWHELKK--VLNSDQ 128 Query: 120 RETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLL 179 + V+ FV+ +D V R +E ++ + V + + +F + ++R +++ Sbjct: 129 KAQYLDQVAPFVSLVDGFVLKLQRFSERKLIALAAVGSFGLGGIFAVSLFVVYYIREQVV 188 Query: 180 QPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTA 239 +P ++ + + +R+F + EM +L N+M+ +L + Y LE V EKT Sbjct: 189 RPLNAMVDASEKIKNRNFDVMLEETSSTEMGILSRTFNSMAGDLGKLYRGLEHAVNEKTN 248 Query: 240 GLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQE 299 L+ NQ L L+ +++ L + +L L + + L + + + Sbjct: 249 KLQMANQSLQVLYHSSQELTASRITASNFQTILRHWVALEGICALRLEIEEEAGKP---- 304 Query: 300 FTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQ 359 L + P G L+ L G L + Sbjct: 305 ---------------LILQEGKPSG--AVMLQTPLTLDGHHLGFLYWEAGSPEP----DR 343 Query: 360 QLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ 419 L+D L+ + ++ Q + +QL++MEERATIARELHDS+AQSLS +K+Q++ L+ Sbjct: 344 ALIDNFALILSRAIYYNQAQRQAEQLLLMEERATIARELHDSLAQSLSYLKIQLTLLKRS 403 Query: 420 G-----DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSA 474 D + ++ +I L+ ++ QLRELLTTFRL LTE +L + S Sbjct: 404 VTPLKSDGDLSKTENIIREIDKGLSDAYTQLRELLTTFRLTLTEGSFGQSLLGMLTQLSG 463 Query: 475 KFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTV 534 + ++L+ L + +HQ +HL+Q+ REA NA+KH++A+++ V + +V++T+ Sbjct: 464 QTDAKIELNNALSSIALDAHQQVHLVQLIREATINAIKHAKATKIKVNCQEQQGRVQVTI 523 Query: 535 QDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVT 582 +D+G G + NHYGM IM++RA LRG+ +V G +VV+T Sbjct: 524 EDDGVGFDLQDHKINHYGMSIMQERAARLRGELKVESAPGKGCKVVLT 571 >UniRef50_P27896 Nitrate/nitrite sensor protein narQ n=113 Tax=Enterobacteriaceae RepID=NARQ_ECOLI Length = 566 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 156/584 (26%), Positives = 262/584 (44%), Gaps = 36/584 (6%) Query: 6 LSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVP 65 + + +A + + ++ + A AIN AGSLRMQSYRL + Sbjct: 2 IVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAINIAGSLRMQSYRLGYDLQ 61 Query: 66 L-SEKDKPLIKEMEQTAFSAELTR---AAERDGQLAQLQGLQDYWRNELIPALMRAQNRE 121 S + + +Q S LT + + L W + + + Sbjct: 62 SGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHLNANWLE--MNNRLSKGDLP 119 Query: 122 TVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQP 181 A+++ +V +D V E ++ VV + + + L+ FT+ +R +++ P Sbjct: 120 WYQANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIGIFTLVFFTLRRIRHQVVAP 179 Query: 182 WRQLLAMASAVSHRDFTQR-ANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 QL+ + + H F + + NE+ +L N MS+EL + Y LE V+EKT Sbjct: 180 LNQLVTASQRIEHGQFDSPPLDTNLPNELGLLAKTFNQMSSELHKLYRSLEASVEEKTRD 239 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF 300 L + L L+Q ++ L++ +L +++ +EL + EN + Sbjct: 240 LHEAKRRLEVLYQCSQALNTSQIDVHCFRHILQIVRDNEAAEYLEL-----NVGENWRIS 294 Query: 301 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ 360 QP+ + + T YG L Sbjct: 295 EGQPNPELPMQ-------------------ILPVTMQETVYGELHWQNSHVSSSEP---- 331 Query: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 L++++ L L ++ Q+ QQL++MEERATIARELHDS+AQ LS +++Q++ L+ Sbjct: 332 LLNSVSSMLGRGLYFNQAQKHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRSI 391 Query: 421 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV 480 +++ +++ LN ++ QLRELLTTFRL L + L AL + + + Sbjct: 392 PEDNATAQSIMADFSQALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAKL 451 Query: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT-VAQNDNQVKLTVQDNGC 539 LD +LP + + +HLLQI REA+ NA+KH+ ASE+ V+ V D + ++DNG Sbjct: 452 TLDCRLPTLALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDGNHTVYIRDNGI 511 Query: 540 GVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 G+ E HYG+ IMR+RA+ L G + GGT V ++F Sbjct: 512 GIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPSGGGTLVSISF 555 >UniRef50_Q4FU45 Signal transduction histidine kinase sensor n=2 Tax=Moraxellaceae RepID=Q4FU45_PSYA2 Length = 707 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 159/682 (23%), Positives = 280/682 (41%), Gaps = 103/682 (15%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 ++ L +L + + + G L + A AIN AGS+RM +YR+ Sbjct: 19 IMNSRLLRHSLPLHAWGAIFTISILCFISTLGGGMLAWVSETDAQAINTAGSIRMATYRI 78 Query: 61 LAAVPLS------------------------------------------------EKDKP 72 + + E+ Sbjct: 79 SFQLATNFSENNPFDLNIGLKKNDLEGKKEGTENVKGENRIGEQDKLSPIRKEKTEEIST 138 Query: 73 LIKEMEQTA---FSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQ 129 LI++ME +L A + +G QL+ ++ W EL PAL+ ++ + Sbjct: 139 LIEDMESRLAELHDYQLANANDNEGINNQLKQIESQWFRELKPALLSQDAQKFYIVSF-K 197 Query: 130 FVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMA 189 ++ +D V+ E R ++ V V ++++ + LR +L P +QL+ Sbjct: 198 YIEDVDSFVNELQYRNEQRQTWQQILQIVSLVLTVIIMLVGMQRLRQNVLIPVQQLIKAN 257 Query: 190 SAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILS 249 + +ISG E LG + N+M++ + LE VQ KT L NQ+LS Sbjct: 258 YKFKQGKRNTKVSISGYTEFNALGDSFNDMASTIETHQRSLESEVQIKTQHLVKANQVLS 317 Query: 250 FLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDM--T 307 + ++ L + RL ++ + + L + + + M Sbjct: 318 LFYDFSKSLTTSQVSLYRLDTLITDFGKILPHLEFTLCIQNKFINNKNAIILHGEKMKEL 377 Query: 308 CDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLAT-------------------- 347 C C C + T + +A ++G L Sbjct: 378 CKKLNCDNCLTK-----EGVYTKSYPIAHQKVEFGELKVRPKSVLLINSTLFPNNNDGNT 432 Query: 348 -----------------LPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEE 390 G L + +L+ L ++ L+L + ++++ QLI+ EE Sbjct: 433 PSSQRIQIAKEGRTFFESEIGSELDLENNELIVALTNLISTALSLRKQRQQEHQLILFEE 492 Query: 391 RATIARELHDSIAQSLSCMKMQVSCLQMQG-----DALPESSRELLSQIRNELNASWAQL 445 R+TIARELHDS+AQSLS +K+Q+S L+ + S R+ + QI+ L++++ QL Sbjct: 493 RSTIARELHDSLAQSLSYLKIQISVLERHLKNGSDEQNEASVRQHIDQIKAGLSSAYQQL 552 Query: 446 RELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 R+LL TFRL + AL + E++ K F + + ++ + + + I L+QIARE Sbjct: 553 RDLLITFRLTIDNDNFDEALHEAANEFALKGKFEITVSNRVMTLNLSATEQIDLIQIARE 612 Query: 506 ALSNALKHSQASEVVVTVAQNDNQ--VKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSL 563 ALSN +H+QA V + + +D + +T+ DNG G+ ++ H+G++IM++RA +L Sbjct: 613 ALSNISRHAQAENVEIDLGYDDEDKYIVMTIVDNGVGISGTVDQTQHHGLMIMKERAHNL 672 Query: 564 RGDCRVRRRESGGTEVVVTFIP 585 G+ V ES GT + F P Sbjct: 673 GGELIVSNNESQGTTITAKFAP 694 >UniRef50_C7I506 GAF sensor signal transduction histidine kinase n=1 Tax=Thiomonas intermedia K12 RepID=C7I506_THIIN Length = 643 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 144/632 (22%), Positives = 254/632 (40%), Gaps = 46/632 (7%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEK 69 TL ++AL + L + + W+ ++G A A+N AG LRM SY++ A Sbjct: 6 TLTAKIALFSGAFLLLSLMSIGATLWISWNLEGGAAAVNVAGQLRMLSYKVALA-ATDHD 64 Query: 70 DKPLIKEMEQTAFSAELTRAAERDGQ---------LAQLQGLQDYWRNELIPALMRAQNR 120 D L +++ + L A + ++ +W++ +Q Sbjct: 65 DTQLSSDLQLIQDNLVLLHAGSPSRPLYVPWDGIIRQRYDAVRAHWQSLQPRWESASQAH 124 Query: 121 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ 180 +V+QFV +D VS + + + +A + + + +L Sbjct: 125 PVPREEVNQFVTQIDAFVSSIEHRLDFWTTVLHAFQMGLAALVVIGALLMFYAAYLFVLD 184 Query: 181 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 P +L A+ D++ R +I+ +E+ L N M+ +L Y LE+RV++KTA Sbjct: 185 PVGRLSRGVQALEQGDYSARVDINTTDELGDLAIGFNRMAGQLQAVYDELEERVRQKTAA 244 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDT--------- 291 L + Q L+ L++ + + L E + ++ + LR D Sbjct: 245 LRTEQQRLAALYEVSALVSKAQSLDELSQSFVQVVRRIAGADAAALRWTDESARRYLLLA 304 Query: 292 ---------DDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDR-------------GTT 329 ++E+ TC G Q+ L R T Sbjct: 305 SDGLPAVLAEEEQCLMSDTCFCGQAQHHGGPQIVQFHRLQPEGRALPGRVACERLGYATL 364 Query: 330 LKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVME 389 L + G + + Q L+DTL L A + R +++ V + Sbjct: 365 LSIPVRAQQRLLGEIDLFFHAEQSADEAQHALLDTLAGHLAAAMESLRSAALEREAAVSQ 424 Query: 390 ERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP-ESSRELLSQIRNELNASWAQLREL 448 ERA +ARELHDSIAQSL+ MK+Q+ L+ A +++S++ + S A +REL Sbjct: 425 ERAFLARELHDSIAQSLAFMKIQLQLLRTALQAGKVGKIEQVVSELEVGVKESLADVREL 484 Query: 449 LTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS 508 L FR + E + PAL ++ +++ + G V L + + + I +L I +EALS Sbjct: 485 LLHFRTRTQEQDIEPALRSTVQKFELQSGLSVDLVFHGHGQPLDPDVQIQVLHIVQEALS 544 Query: 509 NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN---HYGMIIMRDRAQSLRG 565 N KH++A++ + V + V D+G G I + H G IMR+RA ++ G Sbjct: 545 NIRKHAKATQARLVVDSLPRW-RFVVSDDGRGYDPEVIAQDGQAHVGQQIMRERAAAIGG 603 Query: 566 DCRVRRRESGGTEVVVTFIPEKTFTDVQGDTH 597 + + GG V + + + Sbjct: 604 HLSIEAQPKGGVRVTLELPEFPAAASARATRN 635 >UniRef50_C5S0V3 Nitrate/nitrite sensor protein NarQ n=6 Tax=Gammaproteobacteria RepID=C5S0V3_9PAST Length = 572 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 161/594 (27%), Positives = 284/594 (47%), Gaps = 38/594 (6%) Query: 1 MLKRCLSPL-TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYR 59 M ++P ++ ++ L + +S ++ + A IN +GSLR QSYR Sbjct: 1 MNTFVINPKNSIARRIGLYFFIIIGFATLISGISLGIMWSNKSDASLINVSGSLRYQSYR 60 Query: 60 LLAAVPLSEKDKPL-IKEMEQTAFSAELTRA----AERDGQLAQLQGLQDYWRNELIPAL 114 + + ++ L ++E + S EL A+ Q L+D W + Sbjct: 61 FWYEMNHAPENIELRLEEYRASLHSPELQALNSSYLLPKEVKARYQRLKDVWEE--MALY 118 Query: 115 MRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWL 174 +R Q+ E+ + + +V +D VS + E +++ + V + + + L + I + Sbjct: 119 IRHQDHESYLSRIEHYVKEIDAFVSALQKFAEFKLKIAISVIAISMLLIIALAYYGIWYT 178 Query: 175 RARLLQPWRQLLAMASAVSHRDFT-QRANISGRNEMAMLGTALNNMSAELAESYAVLEQR 233 R R+++ QL+ + + DF I+ NE+ +L M +EL + Y LE + Sbjct: 179 RKRIIKHLDQLVLASQQIQQEDFDHVSLAINEPNELGVLSKTFTQMVSELKKLYTSLEDK 238 Query: 234 VQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDD 293 V +KT L N+ + L+ ++ L S+ L VL + L+ I L VY D Sbjct: 239 VADKTRRLTAVNRSMMVLYHCSQILTSKPVSRTLLLQVLERVLANEQLKGIALEVYGAD- 297 Query: 294 EENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRH 353 + T D+ + Q + ++ L+W Sbjct: 298 ---YWNITIDTDLLSE----QWQQYEIAIENEKIAMLRW------------------KSS 332 Query: 354 LSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQV 413 L ++L+ ++ E + ++ + ++ ++QQQLI+MEER+ IARELHDS+AQSL+ K+Q+ Sbjct: 333 LLCPDERLLQSVAEMIGRSIYVVQNHKQQQQLILMEERSIIARELHDSLAQSLTFFKIQI 392 Query: 414 SCLQM--QGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEE 471 LQ + + E + +L+ + LN +++QLRELL+TFRL + E L ALE + Sbjct: 393 RLLQRNGEIEQDWEKQKAILNDLEKALNDAYSQLRELLSTFRLTIEEANLTSALERMLDT 452 Query: 472 YSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN-DNQV 530 A+ + L +LP + + + +H+LQI REA+ NA+KH+ ASE+ V N D + Sbjct: 453 LRARTSAQISLTCKLPSLMFSAQEQVHVLQIVREAVINAIKHADASEIEVIAETNADGEH 512 Query: 531 KLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 L ++DNG G+ + HYG+ IM++RA L G+ +++ R GG V+V Sbjct: 513 CLMIRDNGKGIETDIEPEGHYGLTIMKERATELHGEFKIQNRSEGGALVMVILP 566 >UniRef50_A6D1I3 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=1 Tax=Vibrio shilonii AK1 RepID=A6D1I3_9VIBR Length = 583 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 180/579 (31%), Positives = 323/579 (55%), Gaps = 11/579 (1%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEK 69 ++ +++ +L+ +I L+GM +S V +QG H +N+ GS+RM Y+ + + S + Sbjct: 7 SITKKISFFILILCSISLSGMFISLITVDNIQGRTHIVNQIGSIRMLIYKSILSTDKSIR 66 Query: 70 DKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQ 129 + +I+ + + + + + G Q L +++ + QN E++ ++ + Sbjct: 67 SENIIR-INKKLNNPNIIEYMIKSGLSDQHGNLLAFFQENI-----ENQNYESIRSNSDE 120 Query: 130 FVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMA 189 FV +D L+ +R TE I+++ + + ++ + + +++I L +RL +PW +L ++ Sbjct: 121 FVKIIDNLIYKVERNTENNIKSLENIQKAFSIMIIIFGIYSIGNLYSRLFKPWMSILDIS 180 Query: 190 SAVSHRDFTQRANI-SGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQIL 248 ++ DF+++ + ++EM LG ++N MS + E+Y LE V KT L KN+ L Sbjct: 181 RSIKSGDFSKKFIVQKHKDEMNELGDSINLMSESIKETYINLENVVYHKTEDLNRKNKYL 240 Query: 249 SFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF---TCQPD 305 FL++A ++ ++ C+ L+P+ L LT + +++ + D + +N Q F + Sbjct: 241 DFLYRACKKFNNEQYSCDMLAPLTQELIELTGIHKVKILINDYQESDNTQIFDFGSISRP 300 Query: 306 MTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTL 365 C + C LC + + + +L DS+ YG ++ + ++ + +QL+ Sbjct: 301 DFCKNLSCNLCFDNEKTFIENLSEITIKLKDSNHDYGKIVISNNIKSCINVENEQLIIAF 360 Query: 366 VEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPE 425 E LT +L++ ++ QQL++++ER TIARELHDSIAQSLSC+K+++S LQM L E Sbjct: 361 SELLTQSLSVFYKVQQDQQLLILKERNTIARELHDSIAQSLSCLKIKLSILQMDLSNLDE 420 Query: 426 SSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQ 485 ++ ++R E+N ++ QLRELLTTFRL+L G PALE + +EY+ K G + Y+ Sbjct: 421 EQISIIGEMREEVNVAYCQLRELLTTFRLRLDGLGFLPALENTVKEYNKKIGTKINFSYE 480 Query: 486 LPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENA 545 +P + H +IHL+QI RE L+N KH+QAS+V + ++ DN + L + D+GCG + Sbjct: 481 IPANKISIHHSIHLIQIIRELLNNIYKHAQASDVTLDLSMKDNDISLVILDDGCGFSTSQ 540 Query: 546 IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 S YG+ I+ DRAQSL G + GTE +TF Sbjct: 541 ENSR-YGLKIIGDRAQSLSGKWDIISSPGKGTEFYLTFP 578 >UniRef50_B9Z081 Multi-sensor signal transduction histidine kinase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z081_9NEIS Length = 645 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 141/629 (22%), Positives = 252/629 (40%), Gaps = 50/629 (7%) Query: 9 LTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSE 68 L ++ +L + L+ + + WL ++G A AIN AGSLRM++ RL V Sbjct: 15 FRLSAKIIGALLAVLLMALSAIGATLWLSWQLEGGAAAINDAGSLRMRATRLSLDVQRFH 74 Query: 69 KDKPLIKEMEQTAFSAELTRAAERDGQLAQ-------------LQGLQDYWRNELIPALM 115 K + ++ + + T A R G A+ + + D W + P Sbjct: 75 DGKLPREVVQNSIVRYDQTLAVLRRGDSARPLLVPRTAKILLDFKNVADQWHGRIRPLGQ 134 Query: 116 R---------AQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALL 166 Q+ + S +V +++ V+ + E + ++A + Sbjct: 135 AILAAGSEASPQSIARFQSMTSDYVDLINRFVADMEAYNARNTEYLRYCQLMLAALAVVG 194 Query: 167 LVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAES 226 V I + +L P +L ++ + +E A + N M+ LAE+ Sbjct: 195 TVALIYMMMLLVLNPLDKLHQGIQLLAEGQLDVSVPVESDDEFAQVSQGFNLMAQRLAEA 254 Query: 227 YAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIEL 286 A LE+RV+ KTA L+ KN+ L+ L++ + L+ L L + + Sbjct: 255 RATLEERVRAKTASLQQKNKELALLYEISAFLNQPQSLESLCQGFLAKVMAAYRADGGAV 314 Query: 287 RVYDTDDEENHQEF------TCQPDMTCDDKGCQLCPRGVLPVGDRGTTL---------- 330 R+ D + + + C G LC R TL Sbjct: 315 RLTDHEQGIVYVVADQGMPEALLKEEHCMRVGDCLCGEVAEHSSSRVETLSVADNKSCSR 374 Query: 331 -------KWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQ 383 + + G+ Q ++ Q +L++ L + L + R +++ Sbjct: 375 EGYRVISAFPITVQGRSLGLFNLHYRQSVIMTPQQTRLLEVLGQNLAVAIENQRLFAKER 434 Query: 384 QLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD-ALPESSRELLSQIRNELNASW 442 +L V+EER +A+ LHDSIAQ LS + +Q L+ E + + I + S+ Sbjct: 435 ELAVLEERNLVAQGLHDSIAQGLSFLNLQAQMLRQALQLGDKELLDDTVGLIETGIKESY 494 Query: 443 AQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQI 502 +RELL FR +L+E L A+ E + + G V+L + + Q + +L I Sbjct: 495 DDVRELLNNFRSKLSE-SLMQAISTVLERFRRQTGIKVELRSEGLTVPLMPEQQLQILFI 553 Query: 503 AREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS---NHYGMIIMRDR 559 +E LSN KH+QA++VVV + + + +L ++DNG G + H+G+ IM++R Sbjct: 554 LQEVLSNVRKHAQATQVVVHLKDDGSAFELDIKDNGVGFAMATVAGKADTHFGLSIMKER 613 Query: 560 AQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 A R+ + GT V + + Sbjct: 614 AARAGVALRISSQPGRGTSVHLHLPRAQR 642 >UniRef50_B4RLW4 NarX/NarQ n=17 Tax=Neisseria RepID=B4RLW4_NEIG2 Length = 589 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 132/596 (22%), Positives = 259/596 (43%), Gaps = 33/596 (5%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLA------- 62 L ++ L+ L + + ++ L ++ +A I +AG+L+MQ+YRL Sbjct: 12 PLSLRLKLLTGLWVGLAALSVVLTLLLSFRLENAASVIEEAGNLKMQAYRLAYMAGEGSP 71 Query: 63 AVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQD----YWRNELIPALMRAQ 118 + + K +++ + S + D LA +Q W+ ++P L Sbjct: 72 RAQIDNQIAEFEKSLKRISQSDAIHPLIPSDNPLA-YDLIQSMLIIDWQANILPPLQAY- 129 Query: 119 NRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARL 178 R ++ +F ++ + + E + V+ + + V + W + + Sbjct: 130 -RRPTQIELYRFAGNIELFLQALENAGEKNTWWLRRFQWVIMLMTLVSSVLMLFWHQIWV 188 Query: 179 LQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKT 238 ++P + L A + R F G E +G N M+ L Y LE +V E+T Sbjct: 189 IRPLQALREGAERIGQRHFDIPVPEDGTPEFKQVGRCFNQMALRLKTLYDDLEGQVAEQT 248 Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ 298 LE +N+ L+ L++ R LH + LN + + + + + D Sbjct: 249 HNLEKQNRNLTLLYRTTRDLHQSYTPRQAAEEFLNHILPAVGAQSGNICLENGSDT---- 304 Query: 299 EFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQ 358 D G P ++ + + + + G+L G L+ D Sbjct: 305 -----------DISVHTAEHGKKPPLEKYHDETFPIEYQNEKLGMLSLGFSDGTSLTGDD 353 Query: 359 QQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQM 418 + L+ TL+ QL +LA + +E ++ L V++ER+ IA+ LHDSIAQ+L+ + +QV L+ Sbjct: 354 RTLLQTLIRQLGVSLAGAKQEEEKRLLAVLQERSLIAQGLHDSIAQALTFLNLQVQMLET 413 Query: 419 QG-DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFG 477 + E + E + I+ + + +RELL FR +++ A+ ++ + G Sbjct: 414 AFAENKREEAAENIGFIKTGVQECYEDVRELLLNFRTKISNKEFPEAVADLFARFTQQTG 473 Query: 478 FPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDN 537 V+ ++ L + + ++ I +E+LSN KH++A+ V T+++ + +T+QDN Sbjct: 474 ITVETVWENGSFLPTQDEQLQMIFILQESLSNIRKHARATHVKFTLSEYGGRFTMTIQDN 533 Query: 538 GCGVPEN---AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFT 590 G G +H G+ IM++RA+ +R +R + GT V +T P+++ Sbjct: 534 GQGFDTEKIGEPTGSHVGLHIMQERAKRIRAVLEIRSQAQQGTTVSLTGAPKESLP 589 >UniRef50_C4KA07 GAF sensor signal transduction histidine kinase n=2 Tax=Betaproteobacteria RepID=C4KA07_THASP Length = 655 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 141/633 (22%), Positives = 245/633 (38%), Gaps = 59/633 (9%) Query: 11 LVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKD 70 L ++ ++L + LA +A++ ++ ++G+A AIN AGSLRM+ YR+ + ++ Sbjct: 16 LSVKITGMLLGFFLVALAAIALTLFISWRLEGAAAAINDAGSLRMRLYRVAHHLARADLH 75 Query: 71 KPLIKEMEQTAFS---------AELTRAAERDG--------QLAQLQGLQDYWRNELIPA 113 + + L R L G+ + W +L P Sbjct: 76 TSDRQGFAGDLRARVDDFDRILGVLRRGDPSRPLFVPREAGIQQVLSGMSEEWSVQLRPI 135 Query: 114 LMR----------AQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFM 163 L+ + +V ++ V +++ + ++ Sbjct: 136 LLAIAADPDPANLHRRGLEFDRAARDYVEDINDFVLRMEQSYARNTNILRTSQVILVALA 195 Query: 164 ALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAEL 223 + + + + +++P +L + DF R + ++E L N M+A L Sbjct: 196 VIGTILLLRFFFLTVIRPVFELHEGVKRMGQEDFDARVPVLSQDEFGELSAGFNRMAAHL 255 Query: 224 AESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRD 283 Y LE+RV KT LE KN+ L L++ L + L +Q Sbjct: 256 QNVYDTLEERVVAKTRSLEEKNRELEILYEIVAFLREPNDVDTLCKGFLERVQKTMGASA 315 Query: 284 IELRVYD--------------TDDEENHQEFTCQPDMTCDDKG--------------CQL 315 R+ D DD + +E + C + Sbjct: 316 SSARLLDLESRNLCMIVHDGLGDDFLDREEVLACGECVCGEAAQGSGLSLTLDVRNAALA 375 Query: 316 CPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLAL 375 R T + S G+ Q + +QL++ L +QL + Sbjct: 376 VTRDACRRAGFRTVSATSITASKRALGVFNLYFDQPDAIGDADRQLLEALGQQLGIAIEN 435 Query: 376 DRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG-DALPESSRELLSQI 434 R R+++L V EER +ARELHDSIAQ L+ + +QV L+ + + + Sbjct: 436 QRLHARERELAVSEERNLLARELHDSIAQGLAFLNLQVQMLERALAENRAADVSTTVEML 495 Query: 435 RNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSH 494 R + S+ +RELL FR ++ + L A+ A+ + + G LD Q + Sbjct: 496 RRGIQESYEDVRELLVHFRTRVEQQDLDAAIAAALRRLAEQTGIATDLDVQGDGAPLDPE 555 Query: 495 QAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN---HY 551 +L I +EALSN KH+ AS V V V + + + +TV+D+G G E+ S+ H Sbjct: 556 AETQVLYIIQEALSNVRKHAGASTVSVGVRRGRDGLAVTVRDDGVGFAEDRDASDSEAHI 615 Query: 552 GMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 G+ IMR+RA + G VR GTE+ + Sbjct: 616 GLQIMRERAMRIGGRFAVRSSPGRGTEIRLELP 648 >UniRef50_A8FUN8 Two-component sensor NarX n=3 Tax=Shewanella RepID=A8FUN8_SHESH Length = 591 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 158/588 (26%), Positives = 284/588 (48%), Gaps = 33/588 (5%) Query: 7 SPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPL 66 S +LV + + +GL M S + + + G A IN+AGS+RMQ+ R+ A + Sbjct: 26 SSSSLVASAGQFMAIIITLGLFSMISSILVAESLSGDAERINRAGSMRMQAIRVSRANLI 85 Query: 67 SEKDKPLIKEMEQTAFSAELTRA--------AERDGQLAQLQGLQDYWRNELIPALMRAQ 118 + I E F +L+ + +AQ Q + W ++ Sbjct: 86 DQDGSRPILSQEIQVFENKLSHLFFGGIASTIDDPEVIAQHQKILSSWDA------IKQS 139 Query: 119 NRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARL 178 + T D +F +D+LV+ +E ++ + L+ + + ++ + L L Sbjct: 140 PQTTSVEDFDRFTIKIDKLVNLLQMESEKKLSLLRLIQGITLFSILIVSALVLFKLNRSL 199 Query: 179 LQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKT 238 + P +QL+ +AS +F + + NE+ +L + +MS +L +Y E RV +KT Sbjct: 200 IIPLKQLVRVASEAGKGNFNIKVDHIADNELGLLSRTIAHMSKQLENTYQEFEDRVDKKT 259 Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ 298 L NQ L L++A L + ++ L + + + + + N+ Sbjct: 260 QELTQSNQSLEVLYRAASNLSNYEYHQID-QKIIQELVQVLGYGKVSIVL--CEKSINNL 316 Query: 299 EFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQ 358 F T D ++ L +G ++ +P+ Q Sbjct: 317 TFYKAKTNTIDH--------------QYMDVHQFVLEKRGRFFGDIVWQVPKHETPEDWQ 362 Query: 359 QQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQM 418 +QL+ + + + + L++ + + +L++ EERA IARELHDS+AQSLS +K+Q+S L Sbjct: 363 KQLLQAMADIVATAIELEQKKNTENRLLIAEERAVIARELHDSLAQSLSFLKVQMSLLTR 422 Query: 419 QGDAL--PESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKF 476 + E E ++ I+ LN ++ QLRELLTTFRL+L +P L AL+ + E++ K Sbjct: 423 KMQKGLPEEQVNETINDIKQGLNHAYLQLRELLTTFRLKLDDPSLENALQGTVAEFAEKC 482 Query: 477 GFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQD 536 ++L++++P + ++Q IH+LQI RE+LSN +H++AS V + + D+++KL + D Sbjct: 483 QHAIELNFEIPQNYLTANQEIHVLQIIRESLSNVHRHAEASLAGVNLIKEDDKIKLAIWD 542 Query: 537 NGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 NG G+P N + H+G+ IM++RA+SL GT+V++ FI Sbjct: 543 NGRGLPSNLEQQGHFGLGIMKERAKSLNSVLAFEPNSPSGTKVLLEFI 590 >UniRef50_C1D9F9 NarX n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D9F9_LARHH Length = 637 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 147/626 (23%), Positives = 251/626 (40%), Gaps = 47/626 (7%) Query: 8 PLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLS 67 +L ++ L+ LL + + + + L ++G A AIN AGSLR ++Y L + Sbjct: 13 QRSLATKLMLLSLLWLMLAMVSIGFTLHLSWKLEGGAAAINDAGSLRKRTYHLAYLIAS- 71 Query: 68 EKDKPLIKEMEQTAFSAELTRAAERDGQLAQL-----------QGLQDYWRNELIPALMR 116 E E+ F L + D + W+NE+ P + R Sbjct: 72 -HAPAARIEHERQDFRVTLNNLRQGDPARPLFLPDNPEVHRMAALIDARWQNEVHPYVQR 130 Query: 117 AQNRETVSADVS--QFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWL 174 A E V V ++ LV + + + + V + L Sbjct: 131 ALRGEIQLTAVDFEDVVNDINLLVHLIELDNARNTTLLRFFQTSLIAMALIGCVTMLYLL 190 Query: 175 RARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRV 234 ++QP RQL A + D R ++ R+E +L N M+ L + YA LE +V Sbjct: 191 YLLVIQPVRQLGAGMRKLHDGDLGARVKVASRDEFGVLSEGFNEMARRLQDLYANLEDKV 250 Query: 235 QEKTAGLEHKNQILSFLWQANRRLH--SRAPLCERLSPVLNGLQNLTLLRDIELRVYDTD 292 +EKT +E KN+ L+ L+Q LH L E L + L L+ D Sbjct: 251 REKTLSVEEKNRQLTALYQVTSFLHRPQTQTLDEMGEGFLQRVMALVGADAASLKFVDAQ 310 Query: 293 DEENHQEFTCQPD---------MTCDDKGCQLCPRGVLPVGDR----------------G 327 + Q + ++ + C + LPV Sbjct: 311 RGKLDQIVSVGLPDSLNVHETCVSVEQCPCGAALKQALPVAVHLNEVCAGDWPCRNTGFA 370 Query: 328 TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIV 387 + + + +L R ++ L++TL L + R ER++QL V Sbjct: 371 SLAVFHVRYHGQNVALLTLLFRTPRSVAEPDANLIETLASHLGTAIESRRLAERERQLAV 430 Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA-LPESSRELLSQIRNELNASWAQLR 446 EER +A+ LHDSIAQSLS + +QV L+ +A E+++E L+ IR + + +R Sbjct: 431 AEERNLMAQGLHDSIAQSLSFLNLQVQMLESALEAGESEAAQENLAFIREGVAECYEDVR 490 Query: 447 ELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREA 506 ELL FR ++++ A+ + + L + + Q + ++ I +EA Sbjct: 491 ELLLNFRTRISKEEFPDAVRTLLARFEQQARVLTHLQLEGEGLPLNPEQQLQVIFILQEA 550 Query: 507 LSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPE---NAIRSNHYGMIIMRDRAQSL 563 LSN KH+ A +V V + +N ++ + D+G G + A ++ H G+ IMR+RA + Sbjct: 551 LSNIRKHAAAGKVEVNI-RNGQDFEMDIVDDGYGFDQSALAARQARHVGLSIMRERATRI 609 Query: 564 RGDCRVRRRESGGTEVVVTFIPEKTF 589 + R GT V + ++ Sbjct: 610 AATVDIMSRPGEGTRVSLVLPHKERA 635 >UniRef50_C5T4I9 GAF sensor signal transduction histidine kinase n=2 Tax=Acidovorax RepID=C5T4I9_ACIDE Length = 653 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 131/629 (20%), Positives = 241/629 (38%), Gaps = 41/629 (6%) Query: 6 LSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVP 65 + L ++ + + LA + ++ W+ ++G A A+N+AG LRM R++ V Sbjct: 17 RTKSPLTFKLLAMGGGFLLVALASIGLTLWVAWKLEGGAAAVNEAGRLRMNMLRMVL-VQ 75 Query: 66 LSEKDKPLIKEMEQTAFSAELTRAAERDGQ---------LAQLQGLQDYWRNELIPALMR 116 +E + + + Q S EL R + + + ++ W + Sbjct: 76 QTESPEEVQRHARQFDASLELLRTGDPSRPLFVPWGADTRERFEEIRTTWGGLRKEWAVG 135 Query: 117 -AQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLR 175 +R A FV +D V + + + M + + Sbjct: 136 LPPDRARSLAQADSFVHKVDGFVEAIEIQIAGWTAVLHIFQLSMMAVAIAAAITFMAVSY 195 Query: 176 ARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQ 235 +L P QL + + D R + +E L N M+ L S+ LEQ+V+ Sbjct: 196 LLVLNPVSQLQQAQARLRQGDLGVRLPVEADDEFGQLSAGFNLMAHALQASHEELEQKVR 255 Query: 236 EKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEE 295 EKTA + +NQ L+ L++ + S L + ++ + +R D +E Sbjct: 256 EKTANIAVQNQRLAALYEVSALASSATGLEALAQGFVKQIRRVAGADAAAVRWSDEANER 315 Query: 296 ------NHQEFTCQPDMTCDDKGCQLCPRGVLPVGDR--------------------GTT 329 + + C G +C + R T Sbjct: 316 YVLLAGDGMPVAMTEEEHCLHTGACMCGQPQSQARTRVIPIVPSTTLAFPHCRDAGFQTM 375 Query: 330 LKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVME 389 + + G + + + + L++ + L + + R +++ V E Sbjct: 376 VAIPVQMQQRLLGEINLFFRSPTAHTDEVRDLLEAMTRHLASAMEGLRATALEREAAVAE 435 Query: 390 ERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSREL-LSQIRNELNASWAQLREL 448 ER+ +ARELHDSIAQSL+ +K+Q L+ +R+ + ++ + +A +REL Sbjct: 436 ERSLLARELHDSIAQSLAFLKIQTQLLRDAVAKGDVVARDRSMGELDVGVRECYADVREL 495 Query: 449 LTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS 508 L FR + +E + AL A+ ++ + G L +P I +L + +EALS Sbjct: 496 LVHFRTRTSEEDIEAALRATLSKFEHQTGIATTLTMAGHGLPLPPDVQIQVLHMVQEALS 555 Query: 509 NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN--HYGMIIMRDRAQSLRGD 566 N KHS A+ V + V ++ + V DNG G +A+ + H G+ IMR+RAQ + Sbjct: 556 NVRKHSGATRVELHVHRHPRW-RFEVLDNGTGFRVDAVPPDSLHVGLGIMRERAQRIGAV 614 Query: 567 CRVRRRESGGTEVVVTFIPEKTFTDVQGD 595 +V G V + + Sbjct: 615 VQVESSPGEGARVCIELPTMAALQAPRET 643 >UniRef50_Q5P3L3 Nitrate/nitrite TWO-component sensor NARX n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P3L3_AZOSE Length = 648 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 188/624 (30%), Positives = 299/624 (47%), Gaps = 35/624 (5%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIG---LAGMAVSGWLVQGVQGSAHAINKAGSLRMQS 57 ++ R + L L+VL A+ L G+ S +V+ VQ S A+N AG LR + Sbjct: 15 VMGRVRASLAGRATQLLLVLAFVAVAFISLVGIGASVAIVETVQDSGSAVNAAGGLRRLA 74 Query: 58 YRLLAAVPLSEKD--------KPLIKEMEQTAFSAELTRAAERDGQLAQ---LQGLQDYW 106 +R + + D I E A L + ER+ +G+ W Sbjct: 75 HRAASVALAAALDGRTGHADVAAAIGAFEAELGHATLEKVLEREPDSVVASIYRGIHRDW 134 Query: 107 RNELIPALMRAQNR----------ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVH 156 L P L+ A R E + ADV F A +D LV+ +R TE +E + + Sbjct: 135 YVNLKPRLLGAPERASESPDVLFYENLLADVDAFTAQIDALVAVLERETETGLEQLRITL 194 Query: 157 RVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTAL 216 V + ++++ + +R R+ +P +L A A+ ++ DF + +GR+E+ +G+A Sbjct: 195 AVALGMVMIVMIAALCVIRRRVFRPLTELHACAARIAGGDFRAHSRYTGRDELGRVGSAF 254 Query: 217 NNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQ 276 N M+ EL+ Y LEQRV++KTA L N+ L L+ RL+ E L L+ Sbjct: 255 NAMADELSTVYRDLEQRVEQKTADLTRSNRALELLYHVIARLYHAPASPETYVETLKDLE 314 Query: 277 NLTLLRDIELRVYDTDDEENHQEFTCQPDMTC---DDKGCQLCPRGVLPVGDRG----TT 329 + L+ + V T D ++ C CP +P R Sbjct: 315 QVLGLKGSFVCVQPKHGGVATVLSTTMGDCPSRSGSEEECTHCPGRAMPWSYRREDGFDV 374 Query: 330 LKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVME 389 L D+ YG++ L G L Q LV+ + + L + ER++ L + E Sbjct: 375 FLVPLRDADHLYGMMRLALLPGERLRAWQHTLVEAVSRHMGIALGISHQSERERLLALQE 434 Query: 390 ERATIARELHDSIAQSLSCMKMQVSCLQMQGDA--LPESSRELLSQIRNELNASWAQLRE 447 ER+ IARELHDS+AQSLS MK+Q S L + + ++L+ ++ +NA++ QLRE Sbjct: 435 ERSIIARELHDSLAQSLSYMKIQASLLSSALQRPERRDDASDILADMKGGINAAYRQLRE 494 Query: 448 LLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 LL+TFRLQ+ L ++ EEY+ + G P+ L+ +L R + +Q IH+L I REAL Sbjct: 495 LLSTFRLQMEG-DFARLLGSTVEEYAGRSGMPIDLEIRLGGRHLNPNQEIHVLHIIREAL 553 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGD 566 SNA +H++AS + V + + + V++ ++D+G G+ A +HYG+ IM +RA+ L G Sbjct: 554 SNATRHARASSIRVGLFGHPDGVRVIIEDDGKGIRAAAATEPHHYGLAIMGERARGLGGV 613 Query: 567 CRVRRRESGGTEVVVTFIPEKTFT 590 + R GGT V V F P Sbjct: 614 LEIVPRPDGGTRVAVRFDPVARHE 637 >UniRef50_A1W358 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=7 Tax=Burkholderiales RepID=A1W358_ACISJ Length = 638 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 138/625 (22%), Positives = 245/625 (39%), Gaps = 45/625 (7%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEK 69 TL ++ + + + LA + + W+ ++G A A+N+AG LRM R++ A +E Sbjct: 6 TLSTKLLAMGTVFLLVALASIGFTLWVTWKLEGGAAAVNEAGRLRMNMLRMVLA-QQNES 64 Query: 70 DKPLIKEMEQTAFSAELTRAA---------ERDGQLAQLQGLQDYW---RNELIPALMRA 117 + + + EL R D + + ++ W N+ A Sbjct: 65 PQEFARLETRFNEGLELLRTGDPARPLFVPWSDDTRERYEHIRRQWLLIENDWKAAAHYE 124 Query: 118 QNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRAR 177 + E V A FV LD V + + L H M V + Sbjct: 125 SSAEAV-ARADAFVLDLDSFVEAIEIQIVRLTAVLHLFHLFMVALAIGSAVAFMALSYLL 183 Query: 178 LLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEK 237 +L P +L + + D R + +E L N M+ L S+ LE++V+EK Sbjct: 184 VLNPVTRLQQALARLRKGDLGTRLEVEADDEFGQLTAGFNLMAHALQTSHEDLERKVREK 243 Query: 238 TAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENH 297 TA +E +NQ L+ L+ + L E + ++ + +R D +E Sbjct: 244 TATIEVRNQRLAALYAVSALAAEAGSLEELTQGFVQQIRRVAECDAAAVRWSDEANERYV 303 Query: 298 QEFTCQPDMTCDDKGCQLCPRGVLPVGDRG--------------------------TTLK 331 + + + + +G T + Sbjct: 304 LLASDGLPQSLVEHEHCVVTGACECGQAQGQARMRVIPIMPVGGLQLPHCREAGFETVVS 363 Query: 332 WRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEER 391 + G + LS + ++L+ T+ L ++ R +++ V +ER Sbjct: 364 IPVQMHQRLLGEVTLLYRSPLELSAEMRELLSTMAHHLATSMESLRASALEREAAVAQER 423 Query: 392 ATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSREL-LSQIRNELNASWAQLRELLT 450 + IARELHDSIAQSL+ +K+Q L+ +R+ ++++ + +A +RELL Sbjct: 424 SLIARELHDSIAQSLAFLKIQTQLLRDAVAKDNTEARDRSMAELDTGVRECYADVRELLV 483 Query: 451 TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNA 510 FR + + + AL A+ ++ + G L + I +L I +EALSN Sbjct: 484 HFRTRTQDEDIEAALRATLSKFEHQTGAATALSMAGHGLPLAQDVQIQVLHILQEALSNV 543 Query: 511 LKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN--HYGMIIMRDRAQSLRGDCR 568 KH+ A V + V ++ + VQD+G G +++ + H G+ IMR+RAQ + Sbjct: 544 RKHADARRVELRVQRHPRW-RFEVQDDGRGFDPDSVPPDSLHVGLGIMRERAQRIGAHLE 602 Query: 569 VRRRE-SGGTEVVVTFIPEKTFTDV 592 + R GGT VV+ P Sbjct: 603 LVSRPGGGGTCVVLELPPTTREEPA 627 >UniRef50_Q46R21 GAF:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase, dimerisation and phosphoacceptor region n=41 Tax=Burkholderiales RepID=Q46R21_RALEJ Length = 675 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 150/636 (23%), Positives = 251/636 (39%), Gaps = 49/636 (7%) Query: 8 PLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLS 67 L ++ L+ L S + L +A + WL ++G+ AIN AGSLRM++ R+ + L+ Sbjct: 27 RHRLSTRIILLSLASLLVVLTMIAGTLWLSWKLEGAGAAINDAGSLRMRANRVAIELGLA 86 Query: 68 EKDKPLIKEMEQTAFSAELTRAAERDGQL-----------AQLQGLQDYWRNELIPALMR 116 + ++ + A L + + + QL + W++EL P Sbjct: 87 NAGQAGARDAQIQALDGTLAQLRKGNPVRPLFLPDEPAIHEQLDRVAYDWQHELRPLAQA 146 Query: 117 AQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRA 176 + FVA D+LV + + + + + L +A + V I L Sbjct: 147 GSGVA-YVQALPAFVAEADRLVMLIEHDSARKTDLLRLSQAGLAAIACVGTVAVIYLLYL 205 Query: 177 RLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQE 236 ++ P +L ++ R+F+ R + R+E L N M+AEL + Y L RV Sbjct: 206 WIILPVLRLQDGLRRMAAREFSLRLPVETRDEFGTLNAGFNRMAAELQDLYQDLAARVAS 265 Query: 237 KTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEEN 296 KTA LE +N+ L L+ L+ L + +RV D + Sbjct: 266 KTAELERQNRDLETLYDMAAFLNQARDAEAMARGFLERVMGQFDADGGSVRVMDAQHGKL 325 Query: 297 HQEFTCQPDMTCDDKGCQLCPRGVL------------------------------PVGDR 326 H + + G + Sbjct: 326 HLLASAGLPAALAESGNCMAVDACHCGDATREGVVAIADLRRTTRRPLLPQPSPCTREGF 385 Query: 327 GTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLI 386 +R+ G R L +QL+DTL + L L R +QL Sbjct: 386 TAIAAFRIESQRGAIGTFALHFHAPRELPPSDRQLLDTLAQHLGIALEHLRLSASARQLA 445 Query: 387 VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP-ESSRELLSQIRNELNASWAQL 445 V+EER +A+ LHDSIAQ L+ + +QV L D +RE++ +R+ + S+ + Sbjct: 446 VVEERNLVAQGLHDSIAQGLNFLNLQVQLLGDAVDRDDLAEAREIVPMLRHGVEESYQDV 505 Query: 446 RELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVP--SHQAIHLLQIA 503 RELL FR +LT LRPA+E + E + + L +P Q + +L I Sbjct: 506 RELLNNFRSRLTPGELRPAVEETVERFRRQCRTEATLVIDDHGNRLPLQPEQQLQVLFIL 565 Query: 504 REALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN---HYGMIIMRDRA 560 +EALSN KH+ A+ V V++ + + +L V+D+G G + + H G+ IMR+RA Sbjct: 566 QEALSNVRKHAMAAHVTVSL-CHGHDFRLVVEDDGEGFDPAELGRDSEAHVGLNIMRERA 624 Query: 561 QSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDT 596 L + R G + + + + Sbjct: 625 ARLHARLAIDARPGRGVRIELVLPHGDQAAGAERQS 660 >UniRef50_A8GHJ7 Integral membrane sensor signal transduction histidine kinase n=3 Tax=Enterobacteriaceae RepID=A8GHJ7_SERP5 Length = 560 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 162/589 (27%), Positives = 278/589 (47%), Gaps = 39/589 (6%) Query: 6 LSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVP 65 L ++ + +A + + + ++ V A A+N AGSLRMQSYRL + Sbjct: 2 LVKRSVTSSLAKALFCIVILSVLSTGLALTTVADSLRDAEAVNIAGSLRMQSYRLAYDLT 61 Query: 66 -LSEKDKPLIKEMEQTAFSAELT---RAAERDGQLAQLQGLQDYWRNELIPALMRAQNRE 121 + + + + + Q+ + L R + LQ W+ + ++A Sbjct: 62 GPAPELEQHLLQYRQSLQAPALQKLDRFYVPAEVREKYLSLQHAWQP--LAQQIQAGQSA 119 Query: 122 TVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQP 181 A+++ +V +D V R +E+++ V + + + + L++F I ++R +++ P Sbjct: 120 DYQANIAGYVNQIDHFVLALQRYSELKLTIVAAISVLGFIAIIGLVLFCIRFMRRQVVAP 179 Query: 182 WRQLLAMASAVSHRDFTQR-ANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 + L+ + V RDF + + NE+ +L A MS +LA+ Y LEQ+VQEKT Sbjct: 180 LKHLVDASQRVQQRDFNHPPLDTALPNELGVLSQAFTAMSGDLAKLYESLEQKVQEKTQR 239 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF 300 L+ N+ L L+ ++ L+ R + +L+ ++ L I L V D+ E Sbjct: 240 LQQANKTLEVLYNCSQALNVRQIDQQAFEKILHIVRQSEDLHCIRLNVADSLSE------ 293 Query: 301 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWR---LADSHTQYGILLATLPQGRHLSHD 357 L G TL W+ + G L + Sbjct: 294 ------------------WQLRSGRPSPTLAWQSLTIIQGDKPLGELSWQHKEQPPHP-- 333 Query: 358 QQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ 417 L+ ++ L+ + +R Q++ Q ++MEERATIARELHDS+AQ+LS +++Q++ L+ Sbjct: 334 --HLMQSVANMLSRGVYFNRAQKQHMQFLLMEERATIARELHDSLAQALSFLRIQLTLLR 391 Query: 418 MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFG 477 ++E++S L ++ QLRELLTTFRL + E L AL Sbjct: 392 RTLADSTPEAQEIISDFDQALADAYRQLRELLTTFRLNIQEADLNTALHQLLAPLKVLTD 451 Query: 478 FPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN-DNQVKLTVQD 536 ++L +L + + + Q +H LQI REA+ NA+KH+QA E+V+ + +++ D Sbjct: 452 ARIQLHCRLSSQALNAQQQVHALQIVREAVLNAIKHAQAQEIVIRCEMTAEGDNSISIAD 511 Query: 537 NGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 +GCG+ HYG+ IM +RA L G R++R E GTEV +TF P Sbjct: 512 DGCGIASLNEPEGHYGLTIMSERAARLGGTLRIQRGEPDGTEVRLTFPP 560 >UniRef50_P44604 Sensor protein narQ homolog n=30 Tax=Gammaproteobacteria RepID=NARQ_HAEIN Length = 567 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 151/586 (25%), Positives = 277/586 (47%), Gaps = 39/586 (6%) Query: 10 TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEK 69 ++ ++A + + + ++S ++ + A AIN +GSLRMQSYRLL + + Sbjct: 6 SVSTRIAKYLFIILIVAGVISSLSLAIMSSNKYDAEAINISGSLRMQSYRLLYEMQEQPE 65 Query: 70 -DKPLIKEMEQTAFSAELT----RAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVS 124 + ++ + S+ L + + Q + W N + R Q+ + S Sbjct: 66 SVETNLRRYHISLHSSALLEVQNQFFTPNVLKHSYQNILQRWTN--MEKYARQQDVKNYS 123 Query: 125 ADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQ 184 ++ +VA +D V R +E + V V + + L++ + I + +++P Sbjct: 124 KQLTDYVADVDYFVFELQRFSEQKWILGVSVLGFAMLLILLMVSYVIWYTNREVVKPLHL 183 Query: 185 LLAMASAVSHRDFTQ-RANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEH 243 + + V R F + +NE+ L MS EL + Y+ LE+ V EKT L Sbjct: 184 MTKASMQVQMRQFNHIPLDTRKQNELGTLARVFTQMSTELGQLYSRLEEAVNEKTQKLRQ 243 Query: 244 KNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQ 303 N+ LS L+Q+ + L++ + L+ VLN + L +++ V + + T Sbjct: 244 TNRTLSTLYQSAQLLNTNTINDKILNQVLNYIFISDHLNFVKVEVMGAEH----WDITLG 299 Query: 304 PDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVD 363 ++ + L+ + + G+L L +++ Sbjct: 300 KQDANNELQIET------------------LSVDNEELGVLSWQ----AGLPCPDPRIMQ 337 Query: 364 TLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDAL 423 L + L L ++ +++QL++MEER+ IARELHDS+AQ LS +++Q++ L+ Sbjct: 338 NLAQMLARALYFHKNLRQKEQLLLMEERSIIARELHDSLAQVLSFLQIQLTLLKHNLKKE 397 Query: 424 PESSREL----LSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFP 479 E S+E ++ L+ +AQLRELL TFRL + E L+ AL+ + ++ Sbjct: 398 DEQSKEKSLAIIANFEQALSGGYAQLRELLATFRLTIQEANLQLALKQVIDSLRSQTTMQ 457 Query: 480 VKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN-DNQVKLTVQDNG 538 + ++ QLP + + Q +H+LQI REA +NA+KHSQ + + ++ N + + ++ V+D+G Sbjct: 458 MNVNCQLPSQSLNPQQLVHVLQIVREATTNAIKHSQGTVIEISARINAEGEYEILVEDDG 517 Query: 539 CGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 G+P HYG+ IM +R + L + RRE GGT+V +T Sbjct: 518 VGIPNLEEPEGHYGLNIMAERCRQLNAQLHIHRREQGGTQVKITLP 563 >UniRef50_A2SGG0 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=2 Tax=Burkholderiales RepID=A2SGG0_METPP Length = 643 Score = 387 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 148/631 (23%), Positives = 253/631 (40%), Gaps = 47/631 (7%) Query: 3 KRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLL- 61 R L +L ++ + L + L +A + W+ ++G A A+N+AG LRMQ++R Sbjct: 9 SRRLQRASLAAKLGALGSLIMVVALGSIAFTVWVTWQLEGGAAAVNEAGRLRMQTWRYAQ 68 Query: 62 -AAVPLSEKDKPLIKEMEQTAF-----SAELTRAAERD-GQLAQLQGLQDYWRNELIPAL 114 A+ + L ++ + T RD A LQ ++ W+ L A+ Sbjct: 69 VASAQDLPQLPALAQQYDATLALLDAGDPARPLFVPRDEDTRAALQAVRSRWQA-LQRAI 127 Query: 115 MRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWL 174 V +D LV+G + + + + + V + Sbjct: 128 SEGATPLQAGQLAGDLVIEIDHLVTGIEAHLQRWTSILSALQFTLLALALAAGVALLYAA 187 Query: 175 RARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRV 234 + QP +L AV+ D R ++ +E + N+M+ L + Y LE +V Sbjct: 188 HLFIFQPLARLQRGLEAVARGDLGARVDVETHDEFGEVADGFNHMAMRLEDLYRGLETKV 247 Query: 235 QEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDE 294 EKT L + + L+ L++A+RR+ A L E + + + LR +D + Sbjct: 248 AEKTEHLRTERERLAALYEASRRVAQAASLDELAQGFVRQFREVARADAALLRWHDAEQG 307 Query: 295 ENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGT-------------------------- 328 + + L P Sbjct: 308 RMLMLAADRVPAAMLEHERCLAPGDCHCGNGAAPGGPRTITIHALTDGDTGDSAGTCRRF 367 Query: 329 ----TLKWRLADSHTQYGIL-LATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQ 383 L + G + L R + D + L++ L QL + R Q Q+ Sbjct: 368 GFQRVLTLPVLLQDQTLGEVDLLWRDATRPVLDDDRALLEGLAAQLAGGIESVRAQALQR 427 Query: 384 QLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA-LPESSRELLSQIRNELNASW 442 + V EER IARELHDSIAQ+L+ MK+Q+ L+ P ++ ++ ++ + S Sbjct: 428 EAAVSEERGFIARELHDSIAQALAFMKIQLQMLRGALRRGDPAATTRVVDELDAGVRESL 487 Query: 443 AQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQI 502 A +RELL FR + L AL A+ +++ + G P +LD + P + + LL + Sbjct: 488 ADVRELLLHFRTRSDGAELAAALRATLQKFQHQTGLPAQLDVRGPVLPLAPDVQVQLLHV 547 Query: 503 AREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS-----NHYGMIIMR 557 +EALSN KH+QA +V VT+ ++ +TV+D+G G A S H G+ IMR Sbjct: 548 VQEALSNVRKHAQARQVWVTLDPRP-ELSVTVRDDGRGFDLAARNSDDGDDGHVGLRIMR 606 Query: 558 DRAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 +RA + + + GT+V + Sbjct: 607 ERAAGIGAEVEITSTRGEGTQVRIAVPSRPA 637 >UniRef50_A0KIL7 Nitrate/nitrite sensor histidine kinase NarQ n=2 Tax=Aeromonas RepID=A0KIL7_AERHH Length = 570 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 155/588 (26%), Positives = 262/588 (44%), Gaps = 30/588 (5%) Query: 2 LKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLL 61 + + ++ + + ++L + V+ + A AIN +GSLRMQ+YR+ Sbjct: 1 MGKWFKVHSVSSAIGRSMVLILFMASLIAVVAMVTLFYSVPDAKAINLSGSLRMQAYRMA 60 Query: 62 AAVPLSEKDKPLIKEMEQTAFSAELT---RAAERDGQLAQLQGLQDYWRNELIPALMRAQ 118 + ++ + + EQT +AEL R + W+ ++ + Sbjct: 61 YEIEQGQQVLSRLDQFEQTLHAAELQETQRWITPASLRRTYGEVLQQWQ--VMREHIENA 118 Query: 119 NRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARL 178 + + QFVA +D V+ E ++ + L + + + + FT+ + R ++ Sbjct: 119 TPRRYTDNTEQFVAAIDDFVNQMQYHVEFKVRMLALAEGLGLLSIITIAWFTVRFTRQQV 178 Query: 179 LQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKT 238 + P QL+ A + ++F NE+ L A M+ EL + Y LE +V+EKT Sbjct: 179 VAPLNQLVYCARQIQRQEFNLTLPPYCENELGELSGAFVTMADELGKLYRELESKVEEKT 238 Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ 298 A L+ N LSFL+ ++LH+ L +L + I L Sbjct: 239 AKLQQANDTLSFLYSTAQKLHAAPLSRRTLLKLLERAAAHQHIDYIRL---------TRF 289 Query: 299 EFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQ 358 E PD KG GD + + L +YG L Sbjct: 290 EHNAMPDYITGRKGWP---------GDLDAVVSFYLQMDEQEYGRLDVISSHPI-----D 335 Query: 359 QQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQM 418 ++L+ L L D+ + Q+L++MEERA IARELHDS+AQ+LS +K+Q + L+ Sbjct: 336 ERLMKNFSMLLAQVLHKDQTLLQHQRLLLMEERAVIARELHDSLAQALSYLKIQSTLLKR 395 Query: 419 QGDA-LPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFG 477 + + QI L +++ QLRELL TFRL + + L A++ E+ + Sbjct: 396 FFAKGDTVKAEAAMQQIDEGLGSAYTQLRELLGTFRLSIGDANLGEAIKVMLEQLKPQTQ 455 Query: 478 FPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ-NDNQVKLTVQD 536 ++L Y L + + Q IH+LQ+ REA+ NA+KH+ A + V+ D +++ + D Sbjct: 456 ADIRLHYGLADTDLEAGQHIHILQLIREAVLNAIKHASAQVIDVSCETLADGNIQVQISD 515 Query: 537 NGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 +G G+ + NHYG+ IM +RA L G + R GT V +TF Sbjct: 516 DGVGIGIASSAVNHYGLSIMNERASKLHGLLTISERPPRGTCVHLTFP 563 >UniRef50_A9LZC9 Two-component system, NarL family, nitrate/nitrite sensor histidine kinase n=9 Tax=Neisseria RepID=A9LZC9_NEIM0 Length = 536 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 123/545 (22%), Positives = 228/545 (41%), Gaps = 32/545 (5%) Query: 53 LRMQSYRLLAAV-------PLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQD- 104 +RMQ+YRL + + K + + + S + D LA +Q Sbjct: 1 MRMQAYRLAYMAGEGSPRSQIDNQVDEFEKSLNRISQSDAIHPLIPSDTPLA-YDLIQSM 59 Query: 105 ---YWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAV 161 W+ ++P L R D+ +F ++ + + E + + + Sbjct: 60 LIIDWQAHILPPLQSY--RRPTQVDLYRFAGNIELFLQALENANEKNTWWLRRFQWAIML 117 Query: 162 FMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSA 221 + V + W + +++P + L A + R F G E +G N M Sbjct: 118 MTLVSSVLMLFWHQIWVIRPLQALREGAERIGRRCFDIPVPEGGTPEFKQVGRCFNQMGG 177 Query: 222 ELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLL 281 L Y LE +V E+T LE +NQ L+ L+Q R LH + LN + Sbjct: 178 RLKILYDDLEGQVAEQTRSLEKQNQNLTLLYQTTRDLHQSYIPQQAAEHFLNRILPAVGA 237 Query: 282 RDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQY 341 + + D ++ C + + + + + Sbjct: 238 DSGRVCLDGGSDVY----------VSIHHADCGTAASDLGKYHEE----IFPIEYQNETL 283 Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 G LL + P G L D + L+ TL QL +LA + +E ++ L V++ER IA+ LHDS Sbjct: 284 GRLLLSFPNGISLDEDDRILLQTLGRQLGVSLAGAKQEEEKRLLAVLQERNLIAQGLHDS 343 Query: 402 IAQSLSCMKMQVSCLQMQG-DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPG 460 IAQ+L+ + +QV L+ + E + E + I+ + + +RELL FR +++ Sbjct: 344 IAQALTFLNLQVQMLETAFAENKREEAAENIGFIKTGVQECYEDVRELLLNFRTKISNKE 403 Query: 461 LRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVV 520 A+ ++ + G V+ ++ L + + ++ I +E+LSN KH++A+ V Sbjct: 404 FPEAVADLFARFTQQTGTTVETVWENGTHLPTQDEQLQMIFILQESLSNIRKHARATHVK 463 Query: 521 VTVAQNDNQVKLTVQDNGCGVPEN---AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 T++++ + +T+QDNG G +H G+ IM++RA+ +R ++ + GT Sbjct: 464 FTLSEHGGRFTMTIQDNGQGFDTEKIGEPTGSHVGLHIMQERAKRIRAVLKIYSQPQQGT 523 Query: 578 EVVVT 582 V + Sbjct: 524 TVSLA 528 >UniRef50_A5WD78 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WD78_PSYWF Length = 640 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 153/639 (23%), Positives = 282/639 (44%), Gaps = 66/639 (10%) Query: 7 SPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL------ 60 P TL + + L + L SG+L Q A AIN AGS+RM +YR+ Sbjct: 3 IPNTLAVRSWIATTLIILLFLGTALSSGFLAWAAQNDAKAINTAGSIRMATYRMNFLLVA 62 Query: 61 --------LAAVPLSEKDKPLIKEMEQT---AFSAELTRAAERDGQLAQLQGLQDYWRNE 109 A + ++ LI +M Q + R + Q++ + W Sbjct: 63 NQSSAELRAADISSVQQINQLIDDMNQRQSLLQHYQSQRTNKDTRIYRQIERIHQGWTQT 122 Query: 110 LIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVF 169 L+P L+ + A + ++ +D +VS E R L+ + M L+++ Sbjct: 123 LMPLLLARDSVGFYKASLP-YIQQVDAVVSQLQYRNEQRQNRQQLLQLISMSLMILIMIG 181 Query: 170 TIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAV 229 I LR ++L P ++L+ +A + R +++G E LG + N+M + + ++ Sbjct: 182 GIYELRKKVLLPVKKLMQAKAAFTSGKLETRVHLTGYKEFEELGRSFNDMVSTIEQNKQF 241 Query: 230 LEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVY 289 LE+++ KTA L NQ+LS L+ + L + L+ ++ + + L + Sbjct: 242 LERQIALKTAHLTQANQVLSLLYDFAKYLTTSQVSITELNRLIADFGKIIPELEFTLCIK 301 Query: 290 DT--DDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLAT 347 D+++ + + C C C + + + +Q+G L Sbjct: 302 GDLIDNKDAIAIHSSELRDLCSTTTCDSCLIKSSFYTE-----SFLIRHQKSQFGDLRVR 356 Query: 348 ------LPQGRHLSHDQQQL---------------------------VDTLVEQLTATLA 374 + + ++ + L ++ + Sbjct: 357 PKSLGISRPTEQATPSENRIPLVQVAQLDSMIDDTETQVLIANNKPAITALTNLISTAMF 416 Query: 375 LDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA------LPESSR 428 L + ++++ Q+I++EERATIARELHDS+AQSLS +K+Q + L+ + Sbjct: 417 LLQQRQQEHQIILLEERATIARELHDSLAQSLSYLKIQTTILEKRLQHTHCDSPDLALVS 476 Query: 429 ELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPP 488 + + ++++ L +++ LR+LL TFRL L + AL S EE++ K GF VK+ Q+ Sbjct: 477 DSIGKLKDGLTSAYQHLRDLLVTFRLSLNDDSFDEALHNSAEEFAKKGGFNVKVSNQVIS 536 Query: 489 RLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDN--QVKLTVQDNGCGVPENAI 546 + + + ++++QI REALSN +H+ A V V + L++ D+G G+ + Sbjct: 537 LNLSASEQVNVIQIVREALSNICRHANAKNVTVNFGYIADSNDTLLSISDDGKGLSGSFD 596 Query: 547 RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 +++H+G++IM++RA+SL G V E GT V F P Sbjct: 597 QTHHHGLMIMQERAKSLGGQLTVSNNEPTGTVVEARFSP 635 >UniRef50_B8EB80 Histidine kinase n=20 Tax=Shewanella RepID=B8EB80_SHEB2 Length = 611 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 160/574 (27%), Positives = 264/574 (45%), Gaps = 32/574 (5%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 M + +L +++ ++L+ + + + + G A AIN +GSLRMQSYRL Sbjct: 1 MNSGLMKRGSLTSKILGLMLVLILLSSSLSTFAIINLSYSLGDAKAINASGSLRMQSYRL 60 Query: 61 L-AAVPLSEKDKPLIKEMEQTAFSAELTR---AAERDGQLAQLQGLQDYWRNELIPALMR 116 + A S+ + I E E T +S L Q Q + D W ++ + Sbjct: 61 MFYANSGSDAAQDKITEFENTLYSDTLKPSDSWFSPRKIADQYQLVIDKWL--VMKYYIE 118 Query: 117 AQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRA 176 +N A + FV +D LV + ++ + + M ++ + + + Sbjct: 119 QENSRDYVASLKDFVDTIDLLVLEMEHHAAFKLRLLAASQILGLSVMLIIAFVAVRFTKK 178 Query: 177 RLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQE 236 +++ P ++L+ A+ +S +F + E+ L AL + ELA Y LE +V E Sbjct: 179 KVVIPLQKLMESANTISKGNFEIEMPETEYIELTALTHALQKTAKELAMLYGDLESQVAE 238 Query: 237 KTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEEN 296 KT L N L+FL+ L++ + L LN L+ L + L + + E Sbjct: 239 KTLALTRANNELAFLYDNLLTLNANKLDYKALKAALNQLKGYESLDYLRLIIQYPEQEL- 297 Query: 297 HQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSH 356 ++ D G + ++ L G L Q ++ Sbjct: 298 --------EVIEADGGWPEVTQNST---------RFPLQFEQANLGYLELIADQTPNI-- 338 Query: 357 DQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL 416 L + LT ++ + E++QQL +MEER IARELHDS+ Q LS +K+Q+S L Sbjct: 339 ---ALFNNFAIMLTRSIVIHNATEQRQQLALMEERGVIARELHDSLGQVLSFLKIQISLL 395 Query: 417 QMQGDA--LPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSA 474 + D + L++I ++ ++ QLRELL+TFRL + EP L+ ALEA E+ Sbjct: 396 RKNLDHSCRNPTIEAQLTEINEGVSTAYVQLRELLSTFRLTIKEPDLKSALEAMLEQLRT 455 Query: 475 KFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND-NQVKLT 533 K + LDY+L P+ + + Q IH+LQI REA NA+KH++AS + + ++D V + Sbjct: 456 KTSIKITLDYKLAPQWLEAKQHIHILQITREATLNAIKHAEASLINIHCYKDDEGMVNIN 515 Query: 534 VQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDC 567 V DNG G+ R H+G+ IM +RA L G Sbjct: 516 VCDNGIGIGHLKERDQHFGIGIMHERASKLSGKV 549 >UniRef50_C0DXM5 Sensor protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM5_EIKCO Length = 619 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 128/598 (21%), Positives = 220/598 (36%), Gaps = 25/598 (4%) Query: 7 SPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPL 66 +L ++ +LL L ++++ ++ A AI + G L Q +RL A Sbjct: 23 LRRSLSARLLTAILLWAGGLLLFVSMTVVATWRLEERAGAIRQTGRLNDQVHRLTMAAVQ 82 Query: 67 SEKDKPLIKEMEQTAFSAELTRA-----AERDGQLAQLQGLQDYWRNELIPALMRAQNRE 121 + ++++ T + + QL+ ++ + L A + Sbjct: 83 NPGAPLPVQQVADTLKGLNSRQHAVCCTWWDEPASHQLEQVRR----DTEAFLQTAAKPD 138 Query: 122 TV--SADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLL 179 T + G+D + I + + + + L + LR +L Sbjct: 139 TAALLEQAERLHTGIDTYARLLEEQNTRSIGWLRSGRIGLMLLILLSAAVSFRLLRQVVL 198 Query: 180 QPWRQLLAMASAVSHRDFTQRAN-ISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKT 238 +P L + ++H R + +E + N M+ L E YA LE +V EKT Sbjct: 199 RPLGTLYQAMNQITHGRLGTRIAGSNSGDEFEAVADGFNRMADNLQEMYAHLEDKVAEKT 258 Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRV-------YDT 291 A L + L+ LH ++ E L + L+ + Sbjct: 259 AALSRQKSEWEMLYYVTSYLHKQSFGSEVEQAFLERMLRLSHSGGGGIFWLAEKGFTTAC 318 Query: 292 DDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQG 351 D P ++ + + + + G L + P Sbjct: 319 DIGLLEGLAERLPHTHTAEQESEAGNMVWMQGEEGALVALVPIYALGGFQGWLALSKPTV 378 Query: 352 RHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKM 411 LS L+ L QL +QQ V+EER+ IAR LHDS+AQSLS + M Sbjct: 379 PLLSAQNTGLMRLLCTQLGIARENAAMTLLKQQNAVLEERSRIARSLHDSLAQSLSFINM 438 Query: 412 QVSCL-QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCE 470 + L + + +S R+ + IR+ + + +RELL FR + + + E Sbjct: 439 RFQMLSKNKLLPDDKSVRDNIEMIRDGIQYCYEDVRELLDHFRAKPQYGNFAETVRSVIE 498 Query: 471 EYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQV 530 + G PV L L+ S Q L I +EALSN KH+ A + V + D Sbjct: 499 RSRKQAGIPVVLHISGGDCLLNSEQQTQALFILQEALSNIRKHADAQQAEVLLENGDG-F 557 Query: 531 KLTVQDNGCGVPE----NAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 + V+D+G G A H G+ +M +RA+ + + +R R GTEV + Sbjct: 558 TIIVRDDGQGFDPESRAEAEPGQHIGLSVMHERAEKIGAEISIRSRPGSGTEVRLHIP 615 >UniRef50_A6FC55 Hypothetical nitrate/nitrite sensor protein NarQ n=1 Tax=Moritella sp. PE36 RepID=A6FC55_9GAMM Length = 572 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 139/593 (23%), Positives = 274/593 (46%), Gaps = 38/593 (6%) Query: 1 MLKRCLSPL-TLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYR 59 M+K + +++ + + A+ +S + A +INKAG+LRMQSY+ Sbjct: 1 MIKNIIPSHQSIIILIGRGMFSILALASMLTFISLVALSLSLSDASSINKAGALRMQSYQ 60 Query: 60 LLAAVPLSEKD---KPLIKEMEQTAFSAE---LTRAAERDGQLAQLQGLQDYWRNELIPA 113 + + E + + I Q+ + + + ++ W+ Sbjct: 61 IAYNLSRDESELMRQGHIDTFNQSLAHIKNNIVDNWDISSKLKQEFIIVETQWQK--QSD 118 Query: 114 LMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIW 173 ++ + N E V +FV+ +D V +E +++ + L+ + + + + TI Sbjct: 119 ILHSDNPEQFLLYVDEFVSEIDTFVQNLQNHSEYKVKVITLIKGLGIGLIFAVCIITIRL 178 Query: 174 LRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQR 233 ++ ++L+P +Q+ A ++ + +F + NE+ L + +++M+ +L + Y+ LEQ+ Sbjct: 179 MQVQVLKPLQQIFAASNRIRKGEFDVSFDFFYENEIGSLASNISHMANDLNQLYSTLEQQ 238 Query: 234 VQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDD 293 V KT L+ ++FL+ +++LH + L L + L L L + ++ Sbjct: 239 VDAKTKQLKEAKDKINFLYTTSQKLHVTHLNADMLEQTLQSVSELNGLSFYNLILTGSEV 298 Query: 294 EENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRH 353 E + T+ +L +G L + Sbjct: 299 ETIYLNAGADNGE---------------------QTIDLKLELEEQSFGTLTVLKREA-- 335 Query: 354 LSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQV 413 + Q+ + + ++ + Q+ ++MEERA IARELHDS+AQ+LS +K+QV Sbjct: 336 ---NDQEHLRSYCRIISRAQHRSQSNLEAQRSLLMEERAVIARELHDSLAQALSYLKIQV 392 Query: 414 SCLQMQG--DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEE 471 + L+ + ++ E++ +I L S+ QLRELL TFRL L + L A+ + Sbjct: 393 ALLKRHLKNQEVTPTTNEIVEEIDVNLRVSYTQLRELLNTFRLTLDDANLSEAISIMLAQ 452 Query: 472 YSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTV-AQNDNQV 530 + + L Y+L L +Q IH+LQI REA+ N++KH+ ++E+++ + + Sbjct: 453 LRQRTKSKIHLSYELEEHLFKPNQHIHILQIIREAVLNSIKHANSNEIMIDCGTNKNGTI 512 Query: 531 KLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 ++++ D+G G+P + +SNHYG+ IM +RA L ++ GT V++TF Sbjct: 513 EVSISDDGDGIPADPTKSNHYGLTIMDERASKLGAKLEIKNNIIKGTSVLLTF 565 >UniRef50_C4K985 Histidine kinase n=1 Tax=Thauera sp. MZ1T RepID=C4K985_THASP Length = 637 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 181/613 (29%), Positives = 295/613 (48%), Gaps = 32/613 (5%) Query: 2 LKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLL 61 + R L +++ V++ ++ T IGLAGM+ S +V + S AI A +LR + R+ Sbjct: 5 VPRLLVRRSIMLLVSVALVAMTLIGLAGMSASFVVVDRSRDSVQAIAVASTLRGHTQRIA 64 Query: 62 AAVPLS---------EKDKPLIKEMEQTAFSAELTRAA---ERDGQLAQLQGLQDYWRNE 109 + + E+ + + ++E+ A L R + A +G+Q W Sbjct: 65 NLIAIDALKGRIGVSERTRAAMADIERELQQAALRRFVDEAPGELFAATYRGVQAGWERS 124 Query: 110 LIPALMR--------AQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAV 161 + P + A+ ET+ A V FV +D LV+ + E RI+ + + + A Sbjct: 125 VRPRIEALAGPVPPDAREVETLLAGVDDFVGQVDSLVAVLGQENERRIDELRRILALAAA 184 Query: 162 FMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSA 221 +++ I+ L+ LL+P LL A ++ DF R +G +E+ +G+A N M+ Sbjct: 185 VTLGVVLVVIVLLQRALLRPLGGLLDAARRIAGGDFGVRVRYTGEDELGQVGSAFNLMAD 244 Query: 222 ELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLL 281 ELA Y +LE RV EKTA L+ N+ L L+ A RL+ + L + + L Sbjct: 245 ELARHYHLLELRVTEKTAELQRSNRSLELLYHAIARLYQAPSAPDAYEATLRDIDRVAGL 304 Query: 282 RDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGD-------RGTTLKWRL 334 + + + + + + T L++ L Sbjct: 305 EGSFVCIEPRPGAPAAVIASSMGPCPDRAERGEDACAACRAGSEGQALALLSPTLLRFPL 364 Query: 335 ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATI 394 D +G+L +L G L Q+QLV+ L + L R E+++ L + EER+ I Sbjct: 365 RDREHHHGMLRLSLSDGARLEDWQRQLVEALSRHIGMALGAARRTEQERLLALQEERSVI 424 Query: 395 ARELHDSIAQSLSCMKMQVSCLQMQG--DALPESSRELLSQIRNELNASWAQLRELLTTF 452 ARELHDS+AQ+LS MK+QVS LQ A + +L+ +R ++A++ QLRELL +F Sbjct: 425 ARELHDSLAQALSYMKIQVSLLQRALADPARTAEAEPILADLREGISAAYRQLRELLVSF 484 Query: 453 RLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALK 512 RL L+ L +E + EY + G V+L +L + +Q +H+LQI REALSN ++ Sbjct: 485 RLGLS-ADLATLMEDAAREYGTRGGLEVELAVELGACQLSPNQEVHVLQIVREALSNMVR 543 Query: 513 HSQASEVVVTVAQN-DNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGDCRVR 570 H+ A V + D +V L V+D+GCG+ A NH+G+ IMR+RA+S+ G+ + Sbjct: 544 HASARHAWVALRGGADGEVLLEVRDDGCGIGAPPADARNHHGLAIMRERARSMGGEIDIG 603 Query: 571 RRESGGTEVVVTF 583 GT V V F Sbjct: 604 PALPSGTRVCVRF 616 >UniRef50_A4BGQ5 Signal transduction histidine kinase, nitrate/nitrite-specific n=1 Tax=Reinekea blandensis MED297 RepID=A4BGQ5_9GAMM Length = 562 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 154/602 (25%), Positives = 276/602 (45%), Gaps = 51/602 (8%) Query: 1 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL 60 MLK P+ + + LI L A+ + W+ + G A A+N +GSLRMQSYR+ Sbjct: 1 MLKFARYPVASLLIIGLITLA--ALAAVSGLYTLWMTTVLSGDAKAVNLSGSLRMQSYRI 58 Query: 61 LAAVPLS---EKDKPLIKEMEQTAFSAELTRAAERDGQL--AQLQGLQDYWRNELIPALM 115 + E L+ E+ SA L D A ++ + A+ Sbjct: 59 AYLLEQDAPQEHIASLLDTFEERLTSAALKGQIPSDHPHLTAAFSTVEQRFEQMHTAAI- 117 Query: 116 RAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLR 175 + E +V FV +D +V+ + +E +++ + ++ + L + I + Sbjct: 118 --ETPEIYLQEVDAFVEDIDTMVAQLESWSENKVQNLREQQILITLLSLLAAILFAIIIN 175 Query: 176 ARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQ 235 R++ P ++L+ + D + R + GR+E L + LN M+ E+++ + LE +Q Sbjct: 176 RRVVLPLQRLIRTVHRIGRGDRSARVDFQGRDEFGRLASTLNRMADEISQVHGSLESTIQ 235 Query: 236 EKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEE 295 E+TA L N+IL FL+ ++RL + P L ELR+ + Sbjct: 236 EQTAELSRNNRILEFLFTLSQRLSTEKPDITALKHQSVE----------ELRLICPEHSI 285 Query: 296 NHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLS 355 N + + C ++ G L+ Sbjct: 286 NWHQQMYETSPQGYVVRCDADQSYLICEQRNG--------------------------LT 319 Query: 356 HDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSC 415 Q+QL+ T+ + ++ + + ++ ++ ER++IARELHDS+AQ LS +K+QV Sbjct: 320 AWQKQLLQTVSDLFDNAISRMGAYDHENRIALLNERSSIARELHDSLAQQLSYLKIQVVR 379 Query: 416 L--QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYS 473 L + A E+ ++ ++R+ LN+S+ +LRELL TFR QL EPGL P+++A+ ++ + Sbjct: 380 LVKLRERQADEETLNSIIDELRDGLNSSYRKLRELLVTFRSQLDEPGLLPSVKAAIDDVN 439 Query: 474 AKF-GFPVKLDYQLP-PRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND-NQV 530 + L + P + Q IH + + REA++N +KH++A VV++ + N + Sbjct: 440 RMSPNCQIHLYIEDNWPETLTPSQEIHCMHVIREAITNVVKHAKAENAVVSMKRLPSNTL 499 Query: 531 KLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFT 590 ++T+ D+G G E + HYG+ IM +RA + G+ + GG V +TF + Sbjct: 500 QVTINDDGIGFGETLTKPMHYGLDIMAERAIRIGGNIDYKNLNHGGAGVTLTFPLNASEE 559 Query: 591 DV 592 D Sbjct: 560 DR 561 >UniRef50_Q1ZGB4 Nitrate/nitrite sensor protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGB4_9GAMM Length = 549 Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats. Identities = 125/578 (21%), Positives = 250/578 (43%), Gaps = 34/578 (5%) Query: 21 LSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLI-KEMEQ 79 + I + + + +I+K G ++ +++LL A+ + PL+ E+E Sbjct: 1 MILLISVVHLLATFSTFDSHIADTRSISKLGEFKINTFKLLYALQNDPEKTPLLLAEIEN 60 Query: 80 TAFSAELTRAAERDGQL--AQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQL 137 T A+L +++ + L W++ + + F+ ++++ Sbjct: 61 TIRPAKLLKSSWFNTHSLNENSALLLARWQSIEEAFAQ--NDVAGAHVKLLYFIKSINRV 118 Query: 138 VSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDF 197 + + + ++ V L + + +A +F + + + +P QL ++ + Sbjct: 119 IDQYQTLADQKMTLVHLAEFIAFMLLACTGLFLYFYSKNYISEPINQLAKNVESIKKHQY 178 Query: 198 TQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRR 257 +NE +L + +M AE+ + + ++ +V +KT LE+ NQ ++FL +++ Sbjct: 179 DVNFP-HYKNEFGILAQGMRDMYAEIQQLISQMKTQVHQKTQELENANQTIAFLLSISQQ 237 Query: 258 LHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCP 317 L S L LN L L+ + + + + Q C C+ Sbjct: 238 LGSVKLTSPVLYDALNALVKQANLKRVCIELNNGT--------FIQSKSGCSGINCRNS- 288 Query: 318 RGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDR 377 ++ + + YG L + S +Q+ L+++ + L Sbjct: 289 -------------RFPIVINGKPYGFLNYYS---ENESPEQRALIESFSVLIARALCQQE 332 Query: 378 HQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG-DALPESSRELLSQIRN 436 + ++ Q++++MEER IARELHDSIAQSLS +K+Q + L Q + + + + I Sbjct: 333 NVQQTQKILIMEERNIIARELHDSIAQSLSFLKIQCTVLHQQVHQKEQQKALQSIHHIDE 392 Query: 437 ELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQA 496 ++ ++AQLR LL+TFRL T + A++ + + L ++Q Sbjct: 393 AISDAYAQLRSLLSTFRLTATHSNFKEAVQMLISTLQKQTSAQITLKEFSTHFYSAANQQ 452 Query: 497 IHLLQIAREALSNALKHSQASEVVVTVAQNDN-QVKLTVQDNGCGVPENAIRSNHYGMII 555 IHLLQI REA+ NA+KH+ + V+ + + +++ D+G G+ + NHYG+ I Sbjct: 453 IHLLQIVREAIINAIKHADCQHIDVSCLLTPDNNIWISIIDDGKGITNTSAIENHYGISI 512 Query: 556 MRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQ 593 M R+ + + GTEV + F +K T + Sbjct: 513 MEQRSDEIGATFSILPLA-SGTEVKLIFPYKKQHTYKE 549 >UniRef50_A8VTE1 Short-chain dehydrogenase/reductase SDR n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE1_9BACI Length = 633 Score = 328 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 96/620 (15%), Positives = 219/620 (35%), Gaps = 52/620 (8%) Query: 11 LVNQVALIVLLSTAIGLAGMAVSGWL-----VQGVQGSAHAINKAGSL-------RMQSY 58 +V + + L+S + + + + + + G A + G L MQS Sbjct: 25 IVAAIVSVALISLLVIRISVTDTMSVQLDERAKSISGDVAA--RTGDLLLTNNIYAMQS- 81 Query: 59 RLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQ 118 L+ + D + + + + + + +E + Sbjct: 82 -LVNDTINNYNDLEYVFILNED--NEVIVDTYPNHQVSTDIINANRVASDEYNHLITFQS 138 Query: 119 NRETVSADVSQFVAGLDQLVSGFDRTT--EMRIETVVLVHRVMAVFMALLLVFTIIWLRA 176 + + V G+D V R E I +V L + + ++ + ++ L Sbjct: 139 EAGVIRDAAAPVVKGMDATVRVGLRDDSLEEAISSVTLQIITFLILLIVVSLVVVMKLTR 198 Query: 177 RLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQE 236 + +P +L+ + + V+ + T R +E+ L + ++M L + A E V + Sbjct: 199 VITKPIDELVGLTNRVAKGEMTARITNYPSDEIGDLTESFHDMLNTLEHTEAEKENYVNQ 258 Query: 237 KTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEEN 296 + +N+ L L + + ++ + L L + D ++ Sbjct: 259 ----IITRNRELMLLNDLSDHPDTTKDFNAMMNRFVRDLVLELKLDSAAIEATIIDQKQT 314 Query: 297 HQ-EFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLS 355 P+M + C + + H + G + P L Sbjct: 315 FSYRAESCPEMNSNCLITCDCDCEKKQANVFN---VFSIFAHHNEIGQIKICSP--EQLD 369 Query: 356 HDQQQLVDTLVEQLTATLALDRH------QERQQQL-------IVMEERATIARELHDSI 402 +++D++ L + + +E +Q+ + +ER IARELHD Sbjct: 370 TYSHKILDSIANHLGTVIENNELTHEIKKKEEIRQMLLEKILTVQEDERKRIARELHDQT 429 Query: 403 AQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGL 461 +LS + + + L+ PE + + +R + S + +L R L + GL Sbjct: 430 GHALSSILLGLKMLEDA--KTPEEVTKQIEALRKLTHQSIEDIHDLAWQLRPTILDKFGL 487 Query: 462 RPALEASCEEYSAKFGFPVKLDYQL-PPRLVPSHQAIHLLQIAREALSNALKHSQASEVV 520 + A+E +++ K + + + + +I +E+L+N K+++A+ V Sbjct: 488 KTAIERYIQDFQQKLDIDYDVLIKGIDTIRLTPEMETAIFRIVQESLTNIFKYAEANSVS 547 Query: 521 VTVAQNDNQVKLTVQDNGCGVPENA-----IRSNHYGMIIMRDRAQSLRGDCRVRRRESG 575 V + +N + + + ++D+G G + G+ M++R L G + + Sbjct: 548 VILLRNHDMISVIIEDDGVGFDVEKMMNKDPSKFNLGLHGMQERTSLLGGTFEIESEKGR 607 Query: 576 GTEVVVTFIPEKTFTDVQGD 595 GT ++V + + Sbjct: 608 GTAIMVKLPMSSERGEADYE 627 >UniRef50_B2CI54 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Pantoea sp. MMB051 RepID=B2CI54_9ENTR Length = 515 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 166/586 (28%), Positives = 249/586 (42%), Gaps = 89/586 (15%) Query: 3 KRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLA 62 + +S ++ +A + + + +S + Q A A+N AGSLRMQSYRL Sbjct: 9 EFSMSERSVTRSLARALFAIVLLAVFCSFLSLLTLSASQRDAEALNMAGSLRMQSYRLAW 68 Query: 63 AVPLSEK----DKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQ 118 D + Q+ L A D A+ + L W+ L P L Sbjct: 69 DASAHPAALAADIASYQRSVQSPALLALRHAWVPDSVKARYRELLASWQ-SLQPELQTGD 127 Query: 119 NRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARL 178 +R +VS +V +D V R E++++ A LL F I L Sbjct: 128 SR-RFQQNVSLYVEQIDSFVLALQRWAELKMK---------LAVGACLLSFIAILL---- 173 Query: 179 LQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKT 238 L A MS EL + Y LEQ V+EKT Sbjct: 174 ---------------------------------LAKAFCRMSGELEKQYLWLEQAVKEKT 200 Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ 298 A L N+ L L+Q + L + S L + L + L Sbjct: 201 AHLRQANRRLKLLYQCSEIL---RGHDKAYSRALALAKEHENLSAVAL------------ 245 Query: 299 EFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQ 358 PR L VG T L W G +L S + Sbjct: 246 ---------------SAPPRWQLSVGQEDTALAWHSLPLEQTIGGVLRW-----QASASE 285 Query: 359 QQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQM 418 QL+ L L +L LD +E+ + L++MEERATIARELHDS+AQSL +++Q++ L+ Sbjct: 286 PQLMKGLASMLARSLQLDEAEEKVRHLLLMEERATIARELHDSLAQSLVYLRIQMTRLKG 345 Query: 419 QGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGF 478 + ++S++ L + QLRELLTTFRL + L AL + + Sbjct: 346 IVGKESAPA-AIVSEVDAALAEANRQLRELLTTFRLSIEPADLATALAQVIAQLRPQTEA 404 Query: 479 PVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQ-VKLTVQDN 537 ++L P+ + +HQ +H+LQI REAL NA++H+QASE+ V VA+ + + +++ V DN Sbjct: 405 VIQLTGDTQPQHLNAHQQVHVLQIVREALLNAIRHAQASEIEVRVARPEEKLLQIEVNDN 464 Query: 538 GCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 G G + + HYG+ IM++RA+SL + + E GGT V + F Sbjct: 465 GQGFNQPGEKPGHYGLAIMQERAKSLGATLEIGQTEYGGTRVSLRF 510 >UniRef50_B8GUD0 GAF sensor signal transduction histidine kinase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUD0_THISH Length = 550 Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats. Identities = 101/462 (21%), Positives = 179/462 (38%), Gaps = 30/462 (6%) Query: 152 VVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAM 211 ++ + + V + + + + L+ P L A + R I E A Sbjct: 67 LLGIQSLFLVAGLAVTLTLPVLIYHHLITPLFHLRHWAQRARGGNLAARIPIPSTGEFAE 126 Query: 212 LGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPV 271 L +N ++ +L + V +T LE K+ L L+ +++ L + L+ Sbjct: 127 LAQDVNALTEQLQRLTREMRDEVSAQTERLEQKSHTLEVLYDVAASINTSRDLDDLLTRF 186 Query: 272 LNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDM------------------------- 306 L L++ + R+ D Sbjct: 187 LTSLKHALGAQAATARLVTPDGHMRLVANLGFEPDDQRCRQVLPLGKCMCGRVADGGDLS 246 Query: 307 -TCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQ-GRHLSHDQQQLVDT 364 D + C D + L G+ L + HL+ D L+ + Sbjct: 247 WKADIRQCGRVTSDCDTQEDEPAMITIPLQHRGKTLGVYSLFLHEWPEHLNEDMDNLLTS 306 Query: 365 LVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP 424 + L + R E Q+L ++EER +A ELHDS+AQ+L+ ++ +V L Sbjct: 307 IGRHLGMAIEKARVDEEAQRLGIIEERTHLAHELHDSLAQTLATLRFRVRALDETAQDAS 366 Query: 425 ESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDY 484 +R + QI++ LN + +LR L++ FR + G A+E E + G V L Sbjct: 367 AETRREIDQIKDVLNRANVELRALISHFRAPMEPQGFVAAVEKMVETLRRETGISVYLQK 426 Query: 485 QLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN-DNQVKLTVQDNGCGVPE 543 + PR +P+ +L+I +EAL N KH+QA V V + + + + + V+D+G G+ Sbjct: 427 EWRPRKLPAEMETEVLRIVQEALCNIRKHAQAQHVRVLLRNDAEGECMVMVEDDGLGLQP 486 Query: 544 --NAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 H G+ +M +RA L D R+ GT + + F Sbjct: 487 AEQGAPGEHIGLSVMTERAARLDADFRIESEPGEGTRISLAF 528 >UniRef50_C0N1R0 Histidine kinase domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N1R0_9GAMM Length = 615 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 142/604 (23%), Positives = 274/604 (45%), Gaps = 34/604 (5%) Query: 4 RCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAA 63 S TL ++ L++L + L A + +L+ + S A+ K ++ +R +A Sbjct: 22 NSFSRRTLYAKLMLLLLCISLTVLLMQAGTIFLLDYIPSSQAALEKIAIQKVYWHRQIAN 81 Query: 64 VPLSEKDKP-----LIKEMEQTAFSAELTRAAERDGQ--LAQLQGLQDYWRN--ELIPAL 114 + DK +++ ++ +D +A ++ ++ +N ++ Sbjct: 82 LDSDNGDKAGETLKAMQQQALDTSDPDVLWMLRQDSPDVVAAVRQVEREQQNFADIATLN 141 Query: 115 MRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWL 174 +RA + ++ V+ D+L R +E + + L+ + +F+ +V + Sbjct: 142 LRAAGQLRIADRVA---KSYDELTLALHRDSETKQSIIGLLQAISLIFVFSCIVALSLGA 198 Query: 175 RARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAV--LEQ 232 R L++ LL A+ D +E A+L + +SA++ + Sbjct: 199 RRVLVERLDNLLRFI-ALKPHDAE---PRHATDEFAVLEQCASQLSAKVQSYESEVTWAH 254 Query: 233 RVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTD 292 R E T L + F+ + + + +L L+ + L D Sbjct: 255 RTSEHTRVLI---RAQDFILRFIESVSEDVLSERTMLKMLYSLERSLGFSNTALIYTDDA 311 Query: 293 DEENHQE--FTCQPDMTCDD-------KGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGI 343 + + F+ Q + + + P G++ + + + G+ Sbjct: 312 AVISSERIIFSHQKPHNLTEKIFKELLQTGSITYDYTNPEGEKVSCMGMTFSGISNGVGV 371 Query: 344 LLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIA 403 LL + +GR L + ++++ L+ H E ++L V+EERA IARELHDS+A Sbjct: 372 LLVEMDEGRFLEDSEVKVLEITTRLLSMVTKFQSHDEEGRRLAVLEERAAIARELHDSLA 431 Query: 404 QSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRP 463 QSLS MK+QV+ LQ + A + + ++R L+ ++ +LRELLTTFR+ + GL Sbjct: 432 QSLSFMKIQVARLQAKSGAQQDDV---VKELREGLDNAYRELRELLTTFRVHMDLRGLGY 488 Query: 464 ALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT- 522 A++A+ +E+S + + D +L + ++ H+L + REALSN ++HS A V + Sbjct: 489 AIQATIDEFSQRSQLVISFDNRLVNCRLTVNEEFHILHVVREALSNIVRHSGADNVTILM 548 Query: 523 VAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVT 582 + Q + +V+LT+ D+G G + +H+G IM++RAQ+L G+ V R GGT V ++ Sbjct: 549 LLQKNGEVELTIDDDGVGFHPASDTYDHHGQAIMKERAQTLGGNVEVMARRFGGTRVRLS 608 Query: 583 FIPE 586 F+P+ Sbjct: 609 FMPK 612 >UniRef50_Q2Y9N2 Periplasmic sensor signal transduction histidine kinase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y9N2_NITMU Length = 692 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 91/475 (19%), Positives = 184/475 (38%), Gaps = 19/475 (4%) Query: 122 TVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQP 181 + A ++QF+ LD +++ E +L+ V+ F + R +L P Sbjct: 192 RIMAPINQFMLELDTRTRNKLSNLQLKFEQQILLILVVLCFALFFATLATFYTRRNILLP 251 Query: 182 WRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGL 241 L S ++ +++ R IS RNE+A LG N+M+ + L ++ L Sbjct: 252 LDYLRRQVSGIAQGNYSTRCAISTRNEIAELGAGFNSMAEAIEHEIIKL----RQVEESL 307 Query: 242 EHKNQILSFLWQANRRL--HSRAPLCERLSPVLNGLQNLTLLRDIELRVYD----TDDEE 295 + + ++ + R + S +C+ ++ L L +++ + +D Sbjct: 308 RERLKEINCFYSIRRGMESSSLEEVCDTIATELIAAMQFPHLAGVKIEMDGKELVSDPYH 367 Query: 296 NHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLS 355 + Q +T + ++ L + GR L Sbjct: 368 GNHVHELQKQITVHGEIRGWIKLFYRGD-------RFFLLPEEQNLID-VIGDDLGRWLE 419 Query: 356 HDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSC 415 H Q + + ++L A R + + E+R IARE+HD + Q L+ + +++S Sbjct: 420 HQQTEARVLVEQELRVRDAAIREFAAHLERMREEDRKYIAREIHDELGQLLAALHLEISL 479 Query: 416 LQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAK 475 L+ D E + + + + + + R G+ AL E+ Sbjct: 480 LRSAKDHGSERLETIRHNMAELVEKAGQSVHNVAEHLRPASLGLGIESALTKLTSEFKKH 539 Query: 476 FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQ 535 G L P + Q + + +I +E+L+N +HS A+ V + + + ++V + + Sbjct: 540 TGIYCDLRLPEEPVNLDEDQTVAIFRIVQESLTNVTRHSGANRVEIRLFREKDEVIVEIC 599 Query: 536 DNGCGVPENAIRSN-HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTF 589 DNG G + + +G++ MR+RA +LRG + G V V+ + Sbjct: 600 DNGRGFDPESAKKGKSFGLVGMRERAAALRGYIAITSGPGQGALVRVSIPLRRNE 654 >UniRef50_Q67S65 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67S65_SYMTH Length = 633 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 81/406 (19%), Positives = 141/406 (34%), Gaps = 29/406 (7%) Query: 214 TALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLN 273 +N + L + A ++ + LE + L + + + E L + Sbjct: 228 HRMNRLLDTLEDKVADRTDQLAQTVRALERRLAESEALHAVDEAISTAIHPDEVLQVIAR 287 Query: 274 GLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTC------------------------- 308 +T + + D T M Sbjct: 288 ESVRVTGGSSALVTLLTPDGSRQFVRATHGEGMEAYVGLELPMEGNLTSLVLQTGKPHFS 347 Query: 309 -DDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVE 367 + + ++ G ++ + + G+L+ Q +L+ L Sbjct: 348 REPDRDPRLNQDLVRAGGWRDVIQAPIRTKNRTLGVLVVASRQPGRFDEQHLRLLTLLAN 407 Query: 368 QLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESS 427 Q + + +++ V+EER +ARELHDS+ Q L + + + D PE + Sbjct: 408 QAGRLIESSELHAKAREVAVLEERNRLARELHDSVTQVLFGLTLNLESAVGLLDRKPEKA 467 Query: 428 RELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQL 486 R LL++ R + A++R L+ R L E GL AL + + G V L Sbjct: 468 RTLLTRSREMAGEALAEMRSLIFELRPAALQEKGLAMALSNHINLFRRRTGVEVNLTLSG 527 Query: 487 PPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENA- 545 + L ++A+EAL+N KH++A V V + + L V D+G G A Sbjct: 528 DE-RLSPDVEFALYRVAQEALNNVAKHARARHVRVKLDLRPEEALLEVCDDGVGFDPTAS 586 Query: 546 IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTD 591 R +GMI MR+R L+G V GT + Sbjct: 587 ARGASFGMIGMRERVSELKGSLEVISAPGQGTCIRARIPAASGGDP 632 >UniRef50_B2AKD3 Putative multi-sensor signal transduction histidine kinase n=1 Tax=Cupriavidus taiwanensis RepID=B2AKD3_CUPTR Length = 608 Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats. Identities = 94/443 (21%), Positives = 182/443 (41%), Gaps = 13/443 (2%) Query: 153 VLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAML 212 + +MA +A+L + + L+ + P L M +S D R + +E+ L Sbjct: 157 QAIFAIMAALLAVLYAASFLLLKRMVRSPVNGLEKMVDKISGGDLDARCEVKSGDELGRL 216 Query: 213 GTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVL 272 +N M+ +L S +L++ ++ + +E+ + + L QA + + + L Sbjct: 217 AVRINYMADQLRTSTLLLQKSERKYRSIVENAVEGIFLLDQAGNLAEANPAMAQLLGYDN 276 Query: 273 NGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKW 332 ++ D + + T D QL P+ + Sbjct: 277 ACDLTVSAESDGRPKSPFSLSLTATLFKTLNVDGEIRGLELQLSRLDGTPIWVQLNARGL 336 Query: 333 RLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVE-----------QLTATLALDRHQER 381 ++ +Y L T R + + QL +E +L A+ + Sbjct: 337 MGSEGSLRYLEGLLTDVTARKHALEDLQLQRDRLELEVSERKWTELELLASRERLQQLHA 396 Query: 382 QQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNAS 441 Q+ I EER IA E+HD + Q L+ +KM +S L MQ ++ ++R + + Sbjct: 397 HQEAIREEERKCIAMEIHDELGQLLTALKMDLSLLSMQLPTGSGVIQKA-EEMRELIEQT 455 Query: 442 WAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQ 501 +R +++ R GL ALE ++S P + P +P +A + + Sbjct: 456 IRIVRNVVSHLRPTALNYGLASALEWLAADFSRHTKIPCRFQSTHPEPNLPDPRATAIFR 515 Query: 502 IAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN-HYGMIIMRDRA 560 I +E+L+N +H++AS+V VT+A D +++ ++DNG G + R+ YG+ M +RA Sbjct: 516 IVQESLTNVARHAKASQVDVTLANTDAGIEVIIRDNGQGFNVVSARAGYSYGLHGMAERA 575 Query: 561 QSLRGDCRVRRRESGGTEVVVTF 583 + + V + GT + + Sbjct: 576 RLIGAQLEVHSKPDRGTLIRLRL 598 >UniRef50_A1AXR2 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=4 Tax=Gammaproteobacteria RepID=A1AXR2_RUTMC Length = 494 Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats. Identities = 86/445 (19%), Positives = 173/445 (38%), Gaps = 33/445 (7%) Query: 170 TIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAV 229 + +R L P+ L + + R + R + A+N++ E Y Sbjct: 50 LYLSIRQDFLSPFSDLQSWIDGYKSNQ-SVRLSDHQRTTFQPVAKAINHLIDENQHLYDD 108 Query: 230 LEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVY 289 +E + ++ L K+ L L+ + +L+ + E + L+ N+ R Sbjct: 109 MESILNKQIQRLSKKSASLETLYSVSSKLNKMHSIDELFTHFLHIFINMIGASSGAARSL 168 Query: 290 DTD------------DEENHQEFTCQPDMTCDDKG-------------CQLCPRGVLPVG 324 D D + D C + C C Sbjct: 169 SDDGQLHLVATQGVIDRQGQVTDVLSADCFCGEIAMASDTYVQFSVHTCAQCVGKKSQTK 228 Query: 325 DRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQ 384 T+ L G L+ D++ L+ ++ E + L R + ++ Sbjct: 229 ASVGTIFIPLKYHGKTLGTFNLFFDTLPSLTFDERALLSSIAENIAIALDKARLDAQTKR 288 Query: 385 LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDAL-PESSRELLSQIRNELNASWA 443 + + +ER +++E+HDS+AQ++ +K+QV+ L + + + +++ + + Sbjct: 289 MELSQERLFLSQEIHDSLAQTIYSLKLQVTVLGNMLKTGKKSDASDKVLSLQSNITQANQ 348 Query: 444 QLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIA 503 +LREL+ FR+ L G+ +L + ++ G L + + V + +++I Sbjct: 349 ELRELMCNFRMPLDPKGIEVSLTNLLNRFMSEEGITTYLQVEGKLQ-VSPEVEMQIMRII 407 Query: 504 REALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR----SNHYGMIIMRDR 559 +EALSN KH++A V V + N +L ++D+G G ++ N+ GM IM++R Sbjct: 408 QEALSNIRKHAKARNVRVLLLVEPN-CQLLIEDDGIGFEKDQNESEIMGNNIGMNIMKER 466 Query: 560 AQSLRGDCRVRRRESGGTEVVVTFI 584 A + + GT V+V Sbjct: 467 AIRIGASIEIESEVDEGTCVIVNLP 491 >UniRef50_Q1H473 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H473_METFK Length = 603 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 138/592 (23%), Positives = 252/592 (42%), Gaps = 16/592 (2%) Query: 2 LKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLL 61 L++ + L + ++ + + + A S +L+ + S A+ + +++ R L Sbjct: 18 LRQRMLRHALYLRFITLLACTAILAVMMQAGSLFLLDYIPASQSAMQQVAQRKLEWARFL 77 Query: 62 AAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRE 121 + P T E +L L + R + + R+ Sbjct: 78 DNPSQDRQPAPWNV---HTLTGGENPHGWYAGHLSGKLAKLVEDVREQERTYHLGNAARD 134 Query: 122 TVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQP 181 + + D L+ G R E + +V++ + + + L + +R L+ Sbjct: 135 EWQPQ--RMLDSHDALLDGLRRDAEEKQAVLVMLQLMGLLLLLCCLGAMALLIRQVLIDR 192 Query: 182 WRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGL 241 L+A+ + +R +E++ L + + SA++ A E + ++ L Sbjct: 193 IAGLVALLPNQALSQQDRRD----LDELSQLESLVQEFSAQMQGFKAETEWFNRTRSDLL 248 Query: 242 EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFT 301 + +FL + L ++ +++ LR++ L E + Sbjct: 249 RRMLRAHTFLHDLVVAFNDSVVNESSLKTMIYAMESSLDLRNVALHFMLDGGEAGGERLL 308 Query: 302 CQPDMTCD-----DKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSH 356 + + V D + A G LL G+ Sbjct: 309 FSQHAPGALPEGVSRDLAVKRSAKFLVADGAECIAATFACPGDNSGTLLLEAKPGQEFHE 368 Query: 357 DQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL 416 L + + L+ L +E+ ++L + EERA IARELHDS+AQSL+ MK+Q++ L Sbjct: 369 SDITLAEITAQLLSLVLGAQSREEQARRLALFEERAAIARELHDSLAQSLAYMKIQIARL 428 Query: 417 QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKF 476 Q QG + E+ +++R L+ ++ +LRELL+TFR+ + GL A++A+ +E+S + Sbjct: 429 QTQGSGGQHDTNEITTELREGLDTAYRELRELLSTFRMHMDVRGLGFAIQAAIDEFSHRS 488 Query: 477 GFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDN-QVKLTVQ 535 + LD +L + ++ H+L + REALSN ++H+ A VVV +A V +T+ Sbjct: 489 SVSITLDNRLVNCRLTVNEEFHILHVIREALSNIIRHAGAKNVVVALAYTPGSTVVVTID 548 Query: 536 DNGCGVPENA-IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 D+G G+P A HYG IMRDRA SL GD + R GGT V + F P+ Sbjct: 549 DDGVGIPATATDEPGHYGQSIMRDRAYSLGGDITISARRQGGTRVRLIFTPK 600 >UniRef50_C6XAG1 Histidine kinase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG1_METSD Length = 608 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 120/580 (20%), Positives = 235/580 (40%), Gaps = 19/580 (3%) Query: 4 RCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAA 63 + L TL ++ +++ + + S +L+ + G+ A+ + + + L A Sbjct: 14 KALLRHTLYLRLVVLLFCVLLLIIMMQVGSLFLLDYIPGNQSAMRQLYAQKFHWQALRAE 73 Query: 64 VPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRN---ELIPALMRAQNR 120 V + + + + R ++L + L+ + ++ Sbjct: 74 VTARPTG-SRLPAHGLNPDAGVIEFSWFRQQLGSRLPPVISRLEADTAHLVAQYPQPEHS 132 Query: 121 ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ 180 V Q + D + R E++ + L+ V + + L + + L+ Sbjct: 133 AGWLQAVDQVLRDYDSVAEELQRDVEVKQSVIGLLQLVSGLLLVSCLFALALKAKHLLID 192 Query: 181 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 L + +F + +E A L + ++A L A E Q ++ Sbjct: 193 RIGHLT----RLLPEEFQLEDDQPYADEFARLEQTIYRIAARLEGFRAESEWFNQTRSER 248 Query: 241 LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF 300 L + FL Q +++ L VL L++ ++++ L + E + Sbjct: 249 LRRVLRAQGFLHQLVGMINTPDLSEALLRKVLYMLESALDVQNVALLFAEKSGGETVERT 308 Query: 301 T-------CQPDMTCDDKGCQLCPRGVLPVG---DRGTTLKWRLADSHTQYGILLATLPQ 350 P + LP + + + G+L Sbjct: 309 LFSQHLPRAIPPGLLAELSTSQAANYQLPASDGQEGASGVVAAFTSPWETLGMLTVEAEA 368 Query: 351 GRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMK 410 +LV+ + L+ + ++ ++ +++ERA IARELHDS+AQSLS MK Sbjct: 369 THVFDETDIELVEMTAQLLSMVMGTQNREQEGRRAALLDERAAIARELHDSLAQSLSFMK 428 Query: 411 MQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCE 470 +Q+ LQ R +++++R L+ ++ +LRELL+TFR+ + GLR A++++ + Sbjct: 429 IQIFRLQSHPQTQHADLRGIVNELRQGLDNAYRELRELLSTFRVHMDVRGLRFAIQSAID 488 Query: 471 EYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN-DNQ 529 E+ + + LD +L + ++ H+L + REALSN ++HS AS V V + + Sbjct: 489 EFMQRSNLSIALDNRLVNCRLTVNEEFHILHVIREALSNIVRHSGASTVTVALVYQSNGS 548 Query: 530 VKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRV 569 V +T+ D+G G HYG IM++RA SL G+ V Sbjct: 549 VIVTIDDDGIGYASKPGEPGHYGHSIMQERAYSLGGELAV 588 >UniRef50_D1UN54 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UN54_9BURK Length = 610 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 96/456 (21%), Positives = 184/456 (40%), Gaps = 36/456 (7%) Query: 154 LVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLG 213 + +A +A L T++ L + P +L M ++ + R + +E+ L Sbjct: 158 AILATIAAVVATLYAATLVLLNGMVRSPINRLEEMVDRIAAGNLDVRCAVESDDELGRLA 217 Query: 214 TALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLN 273 +N M+ L ES A L + Q+ + +E+ + + L + L Sbjct: 218 ARVNAMADRLRESTARLYESEQKYRSIVENALEGIFRLHR-----------NGWLEEANP 266 Query: 274 GLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDK--GCQLCPRGVLPVGDRGTTLK 331 + L V E + + FT Q ++ G LP+ T+ Sbjct: 267 AMARLLGYDSARALVAAGTREPDKRPFTPQQVEGLFERLDGSGEIAELELPLARADGTVI 326 Query: 332 W-------------RLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRH 378 W + + + A HL + +L + E+ L Sbjct: 327 WVQLSARGVADSSGAIVRLDGFFADVTARRQALDHLRRHRDELQAEVAERKRTEQELRAS 386 Query: 379 QERQQQL------IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLS 432 +E ++L I EER IA E+HD + Q L+ +K+ +S LQM+ PE ++ Sbjct: 387 REELRELSWHLEVIREEERKRIALEVHDELGQLLTALKIDISLLQMRLAGNPE-AQGKTD 445 Query: 433 QIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVP 492 +R + + +R + R GL ALE ++++A++ + ++ Sbjct: 446 AMRELIERTMWMVRNVANHLRPAALNFGLVSALEWLAQDFNARYYIQCTVVTHGDEPVLE 505 Query: 493 SHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN---AIRSN 549 +A + +IA+E+L+N +H++AS VV+T+ + + L ++D+GCG + A + Sbjct: 506 DARATAIFRIAQESLTNVARHARASHVVLTLRSGEGFIDLEIRDDGCGFDRDAVSARQRG 565 Query: 550 HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 YG++ M +RA+ + G + S GT V + Sbjct: 566 SYGLLGMAERARLIGGALTITSGASTGTVVALRIPL 601 >UniRef50_C6QH09 Histidine kinase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QH09_9RHIZ Length = 619 Score = 271 bits (692), Expect = 8e-71, Method: Composition-based stats. Identities = 148/601 (24%), Positives = 256/601 (42%), Gaps = 41/601 (6%) Query: 2 LKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLL 61 +++ L L + A +V + L S +L AI A LR +L Sbjct: 41 VRKALGRYPLYFRTAGLVTSAAFAALIIFTASWYLSNY----GAAIGDA--LR----KLH 90 Query: 62 AAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRE 121 AA KP + + + A+L + D Q L++ N + + E Sbjct: 91 AAEISLVAQKPEGAKDQNVSPVADLIGSDVFDDQTI----LRESNVNLDVLKDGQEGKSE 146 Query: 122 TVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQP 181 VS D + + R E R V + + + L + R L+ Sbjct: 147 IVSRDAIELLQQAG---LNLQRNLEARRTQVAFLQLLSFCVLLFCLARLSVGSRRVLVDR 203 Query: 182 WRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGL 241 ++ SA ++Q + R+E+A L + + ++A S A + R L Sbjct: 204 VDRIAGAVSA--GGAYSQ--GRARRDEIARLEDRVGRLLTDIANSGAGTDTRTS-----L 254 Query: 242 EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDD-------- 293 E +I +L A + L +L L+ L++ + + Sbjct: 255 ERMARIQDYLSNAMSVMLRHPFGDGMLRKILYALERTLDLQNTAIVFSEDAAVFHSGRCL 314 Query: 294 -EENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGR 352 + + R + D+ + +LL L R Sbjct: 315 FSNREPAALSKQFEAEISQAGAGAIVEEHAEDLRTRKVGLGFVDATGETSVLLVELSGDR 374 Query: 353 HLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQ 412 L + + + L+ LD H + +++ V+EERA IARELHDS+AQSLS MK+Q Sbjct: 375 TLEAVEIKTLRITASLLSMAAKLDGHDQEARRIAVLEERAAIARELHDSLAQSLSFMKIQ 434 Query: 413 VSCLQ----MQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEAS 468 ++ LQ E ++ + S++R+ L+ ++ +LRELL TFR+ + GL A+E++ Sbjct: 435 LARLQSYQNNVTSESREQTKAITSELRHGLDNAYRELRELLATFRVHMDVRGLDFAIESA 494 Query: 469 CEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVA-QND 527 EE+S + G P+ LD +L + ++ H+L + REALSN L+H++A+ V +T+ + + Sbjct: 495 IEEFSQRSGLPISLDNRLAGAALTVNEEFHVLHVVREALSNILRHARATNVWITMDVRRN 554 Query: 528 NQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 +V +T+ D+G G P ++H+G IM++RA SL G + R GT V +TF P+ Sbjct: 555 GEVTVTIDDDGIGYRPAETKETSHHGQTIMKERAFSLGGAIDIAPRPEAGTRVTLTFTPQ 614 Query: 587 K 587 K Sbjct: 615 K 615 >UniRef50_B4WPC3 GAF domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WPC3_9SYNE Length = 2009 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 81/446 (18%), Positives = 162/446 (36%), Gaps = 62/446 (13%) Query: 210 AMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLS 269 A L L + E ++ AVL+ + + +A + L Q L + L L Sbjct: 1561 ATLAIHLTRLGEEAKQA-AVLQAQEKAASARAAELTKTNQALSQTLDVLTTEPELDRFLG 1619 Query: 270 PVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDR--- 326 +L + D L +YD + Q D P Sbjct: 1620 QILTQIVEQIGADDTHLFLYDEATDTLRSHIAVQDDQVYLGHAPNDPELFYQPFPTDITD 1679 Query: 327 --------------------------GTTLKWR------------LADSHTQYGILLATL 348 TTL+W L G++ Sbjct: 1680 AWQMMTASREPLIFDEIRRDVTDFYWPTTLEWHEARGHQSAACICLKVGSQPIGLIGFAF 1739 Query: 349 PQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVM----EERATIARELHDSIAQ 404 L+ +Q + + L Q T ++ L + ++ + + EER +ARE+HD++AQ Sbjct: 1740 RSIAILTTEQIEFIQALTNQATLSIHLTQLADQSKAAALSVALTEERNRLAREIHDTLAQ 1799 Query: 405 SLSCMKMQVSCLQMQG---------DALP-----ESSRELLSQIRNELNASWAQLRELLT 450 + + + +Q+ + + P + ++ + + R+ ++ R + Sbjct: 1800 AFTGVSLQLEAARSALTKAAASVAAERDPLPPAFDQTQTFILRARDLSRQGLSEARRSVR 1859 Query: 451 TFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSN 509 R L L AL + + + + P +P +HLL+I++EA++N Sbjct: 1860 ALRSQALETDTLPTALRKVLNQINHDTHLDTQFYLEGTPEPLPDDIQLHLLRISQEAITN 1919 Query: 510 ALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRV 569 AL+H+QA+++ +T+A +++L + D+G G ++ + +G++ +R+R G ++ Sbjct: 1920 ALRHAQATQIDLTLAFEPREIQLRIVDDGIGFTPSSQAGSGFGLVGIRERVARFHGTFQL 1979 Query: 570 RRRESGGTEVVVTFI-PEKTFTDVQG 594 GT + VT P Sbjct: 1980 SSSPGVGTTIEVTVPFPTAPSVPPPA 2005 Score = 55.7 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 86/276 (31%), Gaps = 55/276 (19%) Query: 210 AMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLS 269 A L L +++ E ++ A+L+++ + A + + Q L L E L Sbjct: 964 ATLAIHLTHLAEEAKQA-AILQEQEKATEARAAELAKTNEAIAQTLTTLTETPELDEFLG 1022 Query: 270 PVLNGLQNLTLLRDIELRVYDTD------------------DEENHQEFTCQPDMTCDDK 311 +L + L +YD + NH + P Sbjct: 1023 QILIKISEPIEACKAHLFLYDKETDTLNQHIAVEDGQAFKGSAPNHPDLFRHPIPVDLSP 1082 Query: 312 GCQLCPRGVLPVG-----DRGTTLKWR------------------LADSHTQYGILLATL 348 + P L W + + G + Sbjct: 1083 AWEHIVNSPKPWTLDESNPGSAELWWPESLPWHRAEGHRAATCACMRIGNKPIGFIGFAF 1142 Query: 349 PQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIAR----EL---HDS 401 L+ +Q + + L Q T ++ L R E +Q +++E+ AR EL ++S Sbjct: 1143 RHIAVLTDEQLEFIQALTNQATLSIQLTRLAEEAKQAAILQEQEKAARDRAAELAKANES 1202 Query: 402 IAQSLSCMKMQ------VSCLQMQGDALPESSRELL 431 I Q+L+ + + + + + E+ + L Sbjct: 1203 IGQTLTNLAARPKLDEFLGYILAEMSNQVEACKAHL 1238 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 57/218 (26%), Gaps = 44/218 (20%) Query: 217 NNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQ 276 + AVL +R + + + + L + L L ++ L Sbjct: 768 QAQIRQNKAEKAVLAEREKAARERAAELAKTNEAVSRTLETLAANPELDNFLCLLVQELS 827 Query: 277 NLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDR---------- 326 + + L +Y+ + + Q + P Sbjct: 828 EIVGAHNTGLFLYEAESNMLRRHVHVQDGKAYIGPVPRDAEMLRHPFPADITDIWRLIVE 887 Query: 327 ----------------------GTTLKWRLADSHTQY------------GILLATLPQGR 352 T+ W +++ H Q G + + Sbjct: 888 SPQPITFAETGAPEENPVDLWWEDTVAWHISEGHRQLACARLKVGNIPLGFIGFCFREQI 947 Query: 353 HLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEE 390 S ++ +LV L Q T + L E +Q +++E Sbjct: 948 VFSDEKLELVQALANQATLAIHLTHLAEEAKQAAILQE 985 >UniRef50_Q7NE94 Glr3986 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NE94_GLOVI Length = 655 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 93/398 (23%), Positives = 151/398 (37%), Gaps = 42/398 (10%) Query: 228 AVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELR 287 A++ Q V + + L L + L L VL + + E Sbjct: 256 ALIHQDVSDLKRAELLARGQIEALVDTLGALAAEPMLDSFLGQVLTTIATQLGVPLAEFW 315 Query: 288 VYDTDDEENHQEFTC-------QPDMTCDDKGCQLC------------------------ 316 + D +D+ + T D C Sbjct: 316 LTDFEDDLSVMHMTSWHGRILMGADQPDHPGACGKPLSEARDCEVYQQVYLHRRCLVLED 375 Query: 317 ----------PRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLV 366 G T L L + G + R + +L L Sbjct: 376 VPNNPVSVPFREWAAARGGIQTMLIVPLVLADRVIGSFSVCSTEKRVFLSQEIELAQALA 435 Query: 367 EQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPES 426 Q T + L R E+ ++ V+EER +ARELHD++ Q L+ + +Q+ G A P Sbjct: 436 HQATLAVQLTRLAEQGRRSAVLEERNRMARELHDTLMQGLAGIVVQLQAATDAGVADPLD 495 Query: 427 SRELLSQIRNELNASWAQLRELLTTFRLQLTEPG-LRPALEASCEEYSAKFGFPVKLDYQ 485 R+ + + R S A+ R + R QL E G L AL ++ + + + Sbjct: 496 GRDHIDRARTLARRSLAEARRSVRALRPQLLEQGDLGQALADLLQQSIYDNHTEARCEVR 555 Query: 486 LPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENA 545 P +P+ LL+IA EALSNAL+H++A+ V V + QV+L V D+G G + Sbjct: 556 GTPFALPAEAENQLLRIAGEALSNALRHARANRVHVELDYERPQVRLVVADDGRGFDPDR 615 Query: 546 IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + ++ +G++ MR+RA+ + D R+ GT V VT Sbjct: 616 VGTDRFGLVGMRERAERIGADLRLESVPGQGTRVAVTL 653 >UniRef50_B9LCJ4 GAF sensor signal transduction histidine kinase n=3 Tax=Chloroflexus RepID=B9LCJ4_CHLSY Length = 731 Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 94/420 (22%), Positives = 165/420 (39%), Gaps = 31/420 (7%) Query: 206 RNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLC 265 +E L A+ + S A L Q A ++ + L+ L R + + L Sbjct: 314 SDEDVDLLEAIAAQVSGPVVS-ARLYAESQRLAAQVQRRADQLAVLNSIARIVTATLDLR 372 Query: 266 ERLSPVLNGLQNLTLLRDIELRVYDTDDEENH-------------------------QEF 300 E L +Q ++L + + + E + Sbjct: 373 ESLPLATEQIQRGFGYPQVDLFLLEEEANELILVASAGRYAPERVGYRQHINLGLVGRAA 432 Query: 301 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ 360 + +D + G+ D + L L + G+L P+ L+ + Sbjct: 433 RSGRIVRAEDVAAEADYLGLSERLDIRSELCVPLISNGKTLGVLNIESPERAGLTEEDAA 492 Query: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 +++T+ + L + R +R QQ +EER +ARELHDS++Q L M + + Q Sbjct: 493 VLETVADMLAGAVENGRLYQRAQQAAALEERNRLARELHDSVSQQLFSMTLTAQAARSQF 552 Query: 421 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFP 479 + P LL ++ A+ A++R L+ R L + GL A++ + + + G Sbjct: 553 ERNPARVPALLDRLHETATAALAEMRALIFQLRPPALRDQGLVAAIQQHAQHLAHREGLR 612 Query: 480 VKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGC 539 ++L+ R L +I +EAL+N +KH+ A V + + N +QV + V D+G Sbjct: 613 IELNVIGDERH-ARGIEQPLFRIVQEALNNIVKHAAARNVQIMLEFNADQVAIRVIDDGK 671 Query: 540 GVPENAIRSN---HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDT 596 G A S H G++ MR+RA L G V R G EV V +++ Sbjct: 672 GFDPAARPSGEGRHLGLLSMRERAAELGGSFNVHSRPGAGAEVEVVVPLRGRHGNLERPE 731 Score = 44.2 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 50/196 (25%), Gaps = 23/196 (11%) Query: 218 NMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQN 277 M +A A+ + V+ + L + R + + L L ++ L Sbjct: 158 RMVEAIARQAALAVENVRLAERSARLLAKE-QLLAELGRAVGATLDLDTILHQTIDRLAA 216 Query: 278 LTLLRDIEL---------------------RVYDTDDEENHQEFTCQPDMTCDDKGCQLC 316 + L R DD Sbjct: 217 AFGSGLVALLDNQETLMVVAAAPPLDTLIGRQLPLLSGSLAWVVQSGQPFVVDDCRLH-A 275 Query: 317 PRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALD 376 P L D + + L G+L Q S + L++ + Q++ + Sbjct: 276 PDMALFGPDIASCIIAPLRSGGRVIGMLSVVSRQAGVFSDEDVDLLEAIAAQVSGPVVSA 335 Query: 377 RHQERQQQLIVMEERA 392 R Q+L +R Sbjct: 336 RLYAESQRLAAQVQRR 351 >UniRef50_Q67RQ8 Two-component system sensor kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67RQ8_SYMTH Length = 500 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 94/451 (20%), Positives = 168/451 (37%), Gaps = 40/451 (8%) Query: 176 ARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQ 235 + +P +++A+A + D RA + + ML + +++ +L LE++V Sbjct: 51 RQFTRPVSEVMALARRLREGDLRARAVLPPGTDWFMLARTMTDLAEQLEAVTRNLEEQVA 110 Query: 236 EKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDD-- 293 +TA L K L + Q +++ + L V ++ + + D Sbjct: 111 VRTAALARKADQLRAVGQVGQQVAAVLDPDVLLHFVTRVMRGTFGYDVAAVLLQHGDYLV 170 Query: 294 ----------------------------EENHQEFTCQPDMTCDDKGCQLCPRGVLPVGD 325 + + P +LP Sbjct: 171 LAACAARGREEVPLGRAFPLTGPTPSPLARALAAGEPGGERAEGEHPESGPPTPLLPDTA 230 Query: 326 RGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQE---RQ 382 L + + G+++ R + + V T+ Q+ L R E R Sbjct: 231 PRAELAIPIRVADRTLGLMVVQSFDPRPFDEEDRFTVQTIAGQVAVALENARLLEAERRL 290 Query: 383 QQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASW 442 ++L V EER +ARE+HD++AQ + MQ+ ++ A PE++R S Sbjct: 291 RRLAVTEERNRMAREIHDTLAQGFMGILMQLRAMEAA--ADPETARFHREVAAALAQESL 348 Query: 443 AQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQ 501 + R + R L + GL AL A +FG + + + LL+ Sbjct: 349 QEARRSVWKLRPHPLEDRGLAEALAAEVAALEGQFGLIGRFHMDGDAAALEPPVEVALLR 408 Query: 502 IAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR----SNHYGMIIMR 557 IA+EA+ NA+K+++A+ + V + D LTV D+G G + YG+ +M Sbjct: 409 IAQEAIHNAVKYARATRLDVGLTIRDGMAVLTVADDGVGFDPASPPKPAAGGGYGLGMMA 468 Query: 558 DRAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 DRA+ + G V R GG +V K Sbjct: 469 DRARQVGGGLEVDARPGGGCRIVARVPLRKE 499 >UniRef50_Q1AZP1 Periplasmic sensor signal transduction histidine kinase n=2 Tax=Actinobacteria (class) RepID=Q1AZP1_RUBXD Length = 508 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 70/297 (23%), Positives = 114/297 (38%), Gaps = 6/297 (2%) Query: 304 PDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLAD-SHTQYGILLATLPQGRHLSHDQQQLV 362 + R L G+ L L+ G+L + R S + Sbjct: 210 APLRVPVSSLPPGERSPLEGRGVGSVLVVPLSPPGGGFRGLLTVASRRRRAFSRSDVRTY 269 Query: 363 DTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA 422 L R ER ++ V+EER +A E+HD++AQ + + + Sbjct: 270 AAAAGMAALVLENLRLVERARRAGVLEERQRLAHEIHDTLAQGFTSIVTNLEAAGGALQR 329 Query: 423 LPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVK 481 + R L Q S ++ R L+ R L E L AL +S+ G P + Sbjct: 330 DRAALRRHLEQALAVARESLSEARRLVWALRPEPLEEAPLPEALRRLAARWSSSSGIPAR 389 Query: 482 LDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV 541 + PR +P+ + LL++A+EAL+N KH++A V +T++ ++V L V+D+G G Sbjct: 390 VLVTGEPRALPADPEVTLLRVAQEALANVRKHARAGRVAITLSYIGDRVALDVRDDGVGF 449 Query: 542 PENAIRSN----HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQG 594 A +G+ MR+R G V GT + V G Sbjct: 450 DPAAPSPGDDGSGFGLRSMRERVGRAGGTLSVESAPGEGTVLSAEVPAAGAAEPVGG 506 >UniRef50_B8G147 Multi-sensor signal transduction histidine kinase n=2 Tax=Desulfitobacterium hafniense RepID=B8G147_DESHD Length = 779 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 67/392 (17%), Positives = 156/392 (39%), Gaps = 48/392 (12%) Query: 240 GLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQE 299 + KN+ L+ L + ++ + L ++L LN + + + + +Y+ D +N E Sbjct: 369 EIIRKNRELAALNELSKAISGHMNLKDKLYEALNTILQVVGKQAGWIFLYNERDNDNKAE 428 Query: 300 FTCQPDMTCDDKG----------------------------CQLCPRGVLPVGDRG-TTL 330 CQ + ++ + LP G + + + Sbjct: 429 LMCQIGILPEEALTQTKQFQSCSNFPKPNSNSIQVHSSLSTACSIKQLYLPDGTKALSHV 488 Query: 331 KWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRH------QERQQQ 384 L+ G+L + + L++++ QL + +E ++ Sbjct: 489 YVPLSYKDRVLGVLNIIASNLESFTKEDLNLLNSIGLQLGVAIENAELWVELNKKEMLRK 548 Query: 385 L-------IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNE 437 EER I+RELHD +QS++ + + + + + E + +L ++N Sbjct: 549 QLLNKVITAQEEERKRISRELHDESSQSIAALGVGLKSVIEIMEFDKEYALTVLEDLKNN 608 Query: 438 LNASWAQLRELLTTFRLQL-TEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQA 496 ++ +L +++ R L + GL PA+ E + G + + P + Sbjct: 609 TSSILKELHQIIYDLRPSLLDDLGLLPAIRWYVESRLSNTGIKPHVAFTGDPLRLTDETE 668 Query: 497 IHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP-----ENAIRSNHY 551 I + +I +E+++NA+K+S A + + + + + + ++D+G G + Sbjct: 669 ITIFRIVQESITNAVKYSNAKNLYLGLEFGQDSLFVYIEDDGDGFNIEKALAQKDGKESF 728 Query: 552 GMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 G++ M +RA+ + G+ ++ R + GT + + Sbjct: 729 GLLGMTERAELIGGEIEIKSRSNNGTRIELKL 760 Score = 63.8 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 56/161 (34%), Gaps = 10/161 (6%) Query: 142 DRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRA 201 + + V + + ++ LL + L + +P ++L + A + D + Sbjct: 150 QNSILQWVYNVRKLMLNLTLYGVLLGAVAALILSTLITRPLKRLASYALRLGKGDLEEDI 209 Query: 202 NISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSR 261 I G++E+ L LN M +L +L Q E +L + A + Sbjct: 210 VIRGKDEIVELALCLNRMRKDLFTGMQMLRQSE-------ESNRTLLEAISAAGEGIAVF 262 Query: 262 APLCE---RLSPVLNGLQNLTLLRDIELRVYDTDDEENHQE 299 + V +NLT EL + ++ + + Sbjct: 263 QDNLNKKGTMKFVNEQYENLTGYTKAELLEMEANEIIDSES 303 >UniRef50_B0C7C8 GAF domain protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7C8_ACAM1 Length = 1980 Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 89/448 (19%), Positives = 169/448 (37%), Gaps = 53/448 (11%) Query: 202 NISGRNEMAMLGTALNNMS----------AELAESYAVLEQRVQEKTAGLEHKNQILSFL 251 + E+A+L TA + + A A VL +R + + + Sbjct: 1527 RVWSDAEIAVLETAASAVGGAVECDRTRQAREAAEKEVLAEREKAAQERAAELAKTNEAI 1586 Query: 252 WQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQ-------- 303 Q L + L L +L + D L +YD + H + Q Sbjct: 1587 SQTLNALTTEPELDRFLGQILTQIIEQIGADDTHLFLYDAETHTLHSQLAVQNNTVYLGN 1646 Query: 304 ----PDMTCDDKGCQLCPRGVLPVGDR-----------------GTTLKWR--------- 333 P++ D + + + TTL+W Sbjct: 1647 APNDPELFYTDIPADITAAWQILISSDKPFTLDDDNPKAATFLWPTTLEWHTSRGHQSAT 1706 Query: 334 ---LADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEE 390 + + G + LS +Q + V L Q T + L R E+ + + +E Sbjct: 1707 CACMKIGNQPIGFIGFAFCDQTVLSTEQLEFVQALTNQATLAIHLTRLAEQARTNALTDE 1766 Query: 391 RATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLT 450 R +ARE+HD++AQ+ + + +Q+ + PE+++ L Q R+ + ++ R + Sbjct: 1767 RNRLAREIHDTLAQAFTGISLQLEAAKNILSQQPETAKSYLDQARDLTHQGLSEARRSVH 1826 Query: 451 TFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSN 509 R L L AL+ + + + + Q P L+ ++LL+I +EA++N Sbjct: 1827 ALRSEALERETLVKALQKNLTQMTLNTSLQTEFQIQGTPILLEEGLQLNLLRIGQEAITN 1886 Query: 510 ALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS-NHYGMIIMRDRAQSLRGDCR 568 L+H+QA + VT+A D +V L V D+G G + +G++ +R+R +G + Sbjct: 1887 VLRHAQAKTLTVTLAFTDQEVGLCVTDDGVGFEPQDVADITGFGLVGIRERTVRYQGQVK 1946 Query: 569 VRRRESGGTEVVVTFIPEKTFTDVQGDT 596 + GT + V + + + Sbjct: 1947 ITSHPGEGTTIEVKMPVQPNASSPGREE 1974 Score = 56.1 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 64/235 (27%), Gaps = 42/235 (17%) Query: 202 NISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSR 261 + +E+A+L TA + + + E R A E +Q+ S L + L S+ Sbjct: 346 RVWSESEIAVLETAAACIGSAIERDRTRKE-REATAQARAEELSQVNSILQTSLTNLASQ 404 Query: 262 APLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVL 321 L L V + + + + D + Q Sbjct: 405 TDLNAFLGHVTHLINQAAGAYSGYVFLQDIPTNTLELRLSVQKGQIRIGASATDPELFQH 464 Query: 322 PVG-----------------------DRGTTLKWR------------------LADSHTQ 340 P D + L W L Sbjct: 465 PFPTDITPAYPDLCQTREIGLYGVYLDVDSDLMWPGTTEWHRRSGHKEAAAVALFAGDQP 524 Query: 341 YGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIA 395 G+L T L + + L+ L +Q + L E +Q +++ER A Sbjct: 525 IGMLGLTFDHEVDLRDEDRDLIRALADQAALAIQLANLAEGTRQTALLQEREAAA 579 >UniRef50_C0N6H4 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H4_9GAMM Length = 570 Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 93/458 (20%), Positives = 172/458 (37%), Gaps = 42/458 (9%) Query: 141 FDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQR 200 +E ++ + + + V + +F + L+P ++LL S D R Sbjct: 136 MQEISERWLD-IRSILALGLVIFVFVSIFLYWGVD-WFLRPLQRLLQALSGFERGDLHLR 193 Query: 201 ANISGRNEMAMLGTALNNMSAELAESYA------VLEQRVQEKTAGLEHKNQILSFLWQA 254 EM + N M L S A +L ++ + L+H I A Sbjct: 194 LPNFTLAEMNQISHTFNRMGQALELSTAENQRLAMLVRQSGDAILSLDHAGNITFCNSTA 253 Query: 255 NRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQ 314 R S+ P+ + L L + I + + + EN + +PD + D Sbjct: 254 ERLFASQTPILK--GESLAHLGFANHYKQISHILENCESTENMETVLVRPDGSQVDLLLS 311 Query: 315 LCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLA 374 L+D+ + L+ TL L E L Sbjct: 312 ----------------TVPLSDNEDRVIGLICTLRDITELKQ---------AEAARNQLR 346 Query: 375 LDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQI 434 R + ER +ARELHD + Q L+ +K ++ + + I Sbjct: 347 ETRLLAKHMDEAQEAERRHLARELHDELGQCLTAIKTDAVLIRNRTETTEPRVFNSAQAI 406 Query: 435 RNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEY-SAKFGFPVKLDYQLPPRLVP 492 + + + + ++T R L + GL P LE + S + +LD + Sbjct: 407 IDTASHIYDVVHNMITRLRPSPLDDLGLVPTLEQCIASWQSRETTINFQLDVNGTLNNLN 466 Query: 493 SHQAIHLLQIAREALSNALKHSQASEVVVTVAQ----NDNQVKLTVQDNGCGVPENAIRS 548 + + ++ +EA++NA++H+ ASE+ V V+ D+++ + +QDNG G+ S Sbjct: 467 EIMNMTVFRVVQEAITNAVRHADASEIKVKVSAEQGSEDDKLIIDIQDNGKGMVVKDFHS 526 Query: 549 N-HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 + +G++ MR+RAQSL G + G +++T Sbjct: 527 DVDFGLLGMRERAQSLGGKFELNSEPGAGVRILITIPL 564 >UniRef50_Q1ASU9 GAF sensor signal transduction histidine kinase n=2 Tax=Bacteria RepID=Q1ASU9_RUBXD Length = 391 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 84/381 (22%), Positives = 145/381 (38%), Gaps = 31/381 (8%) Query: 237 KTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDD--- 293 +T LE +N+ L+ + R L+ L E L L + L L+ + + D + Sbjct: 10 ETQDLERRNRELAAVNAVARELNRSVDLQEALRFTLARVAELLGLKTGWVWLMDGGEPYL 69 Query: 294 --EENHQEFTCQPDMTCDDKGCQLCPRGVL------------------------PVGDRG 327 N + D C Sbjct: 70 AATMNLPSVLAENPPLMDGSRYCYCLDTYKKGDLLEGAANVNVLACSRLSGLVDGTDGLR 129 Query: 328 TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIV 387 L T+ G++ R LS + +L+ T+ + L+ + R R L Sbjct: 130 YHASIPLYSGETKLGVMNVASHDWRSLSREDLRLLYTIGDLLSIAVERARLFARSALLGA 189 Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDAL-PESSRELLSQIRNELNASWAQLR 446 EER +ARE+HD+IAQ L+ +++ + +A P +R+ +S+ + + R Sbjct: 190 SEERNRLAREIHDTIAQGLAATALRLETAEALLEAGSPAEARKEISRALALTRTNLEEAR 249 Query: 447 ELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 + R L L AL E + G PV+ R +P L +I +E Sbjct: 250 RSVLDLRAAPLEGRSLAEALALLAESQERESGIPVRFRAVNGARPLPPRVETGLYRICQE 309 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRG 565 AL+NA +H++AS + V + + +L V+D+G G+ + +G++ MR+RA+ L G Sbjct: 310 ALNNAARHAEASRIEVLLTLTPGEARLRVEDDGRGLDPSPAPPGRHGILGMRERARLLGG 369 Query: 566 DCRVRRRESGGTEVVVTFIPE 586 + GG V E Sbjct: 370 RLEISEAPGGGARVEAAVPLE 390 >UniRef50_C5SBA0 Histidine kinase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SBA0_CHRVI Length = 554 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 95/426 (22%), Positives = 169/426 (39%), Gaps = 33/426 (7%) Query: 191 AVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSF 250 V + ++ + + + +++ EL + Y ++ RV +T L K L Sbjct: 108 QVCQGEPGASDTLTETGVLQGIAQDIRSLNEELTDLYDDMDNRVARQTRRLAQKTASLKI 167 Query: 251 LWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENH------------- 297 L+ +H + L L L+ + R +R+ D Sbjct: 168 LYDVAAGIHQAESVEALLLRFLRVLKEMINARAATVRLVLPDGTRRLIGSIGLNDDLVRE 227 Query: 298 -----------QEFTCQPDMTCDDKG--CQLCPRGVLPVGDRGTTLKWRLADSHTQYGIL 344 D+ CD+ C + + L + G+ Sbjct: 228 SDMTPVDLCLCGNVLAPGDILCDNDARYCSRIYGRRMFASSEVEVVTVPLEHRDERLGVY 287 Query: 345 LATLPQGRHLSHDQ-QQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIA 403 + + + +L+ T+ L +A R +L ++EER +A ELHDS+A Sbjct: 288 TLFVDRPGLQGREDILELLFTVGHHLGVAIAKQRSDAEAHRLSIVEERNALAHELHDSLA 347 Query: 404 QSLSCMKMQVSCLQMQGDA--LPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGL 461 Q+L+ ++ Q L +P +R L++IRN L+ + +LRELL +FR L GL Sbjct: 348 QTLASLRFQCRMLDDSLAGCPIPAEARNDLARIRNGLDEAHTELRELLASFRAPLDRRGL 407 Query: 462 RPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVV 521 PAL + + G V P + + + + LL+IA+EAL+N KH+QA V V Sbjct: 408 VPALAKLTQRLGRETGTHVLFQNDSRPFELSATEELQLLRIAQEALANIRKHAQAHTVRV 467 Query: 522 TVAQN-DNQVKLTVQDNGCGV---PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 + + + L ++D+G G + G+ I+ +RA+ + + R+ GT Sbjct: 468 LLTRESGGRHVLLIEDDGVGFSPPDAQSPPGERIGLSILEERARRIGAELRIESEPGEGT 527 Query: 578 EVVVTF 583 V V F Sbjct: 528 RVEVVF 533 >UniRef50_Q1H0K4 Multi-sensor signal transduction histidine kinase n=2 Tax=Methylophilaceae RepID=Q1H0K4_METFK Length = 573 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 96/522 (18%), Positives = 187/522 (35%), Gaps = 41/522 (7%) Query: 73 LIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVA 132 ++ E ++A+ + + W ++ E VS + Sbjct: 78 HVRSSEIFLYNAQGELIYQSPPSTYRANETPPRWFVRMV-----EPEPEVVSRRI----- 127 Query: 133 GLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLV-FTIIWLRARLLQPWRQLLAMASA 191 LV D +R H + +++ I W+ R L+P +L S Sbjct: 128 RFGMLVVASDAAGAIRESWASFQHLLWIEAGFFVVLNALIYWMLGRWLRPADDILRAISE 187 Query: 192 VSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFL 251 V + R E + + N M L +N+ L+ + Sbjct: 188 VERGNLDVRLPKFNVPEFSRIAQNFNLMGESL---------------RERTEENRRLALI 232 Query: 252 WQANR---RLHSRAPLCERLSPVLNGLQNLTLLRDI--ELRVYDTDDEENHQEFTCQPDM 306 Q + +H +P L I + E QE + M Sbjct: 233 VQQSADAIMIHDPDGNISFWNPAAQRLFGYAPEDIIGKSAALLMPPGHEGEQERSSAASM 292 Query: 307 TCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLV 366 + + + V G + G L+ + R ++ + L Sbjct: 293 SANGLVEHYDTQRVARDGKLLDVSLSIAPLMDPKSGELIGEICSMRDITERK------LA 346 Query: 367 EQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPES 426 E+ L +R Q + +ER ++ARELHD + Q ++ +K + + S Sbjct: 347 EETARKLEENRQLTHLIQRHIEDERRSLARELHDELGQYVTAIKTFAVAIANKAKQEMPS 406 Query: 427 SRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAK-FGFPVKLDY 484 I + N + + ++ R L GL AL + + A+ L+ Sbjct: 407 IESSAQTIVSAANHIYDGMHNIIRHLRPGSLDNLGLSEALRDAVAGWQAQNSNVTFNLEL 466 Query: 485 QLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND-NQVKLTVQDNGCGVPE 543 Q L+ I+L +I +E+++NAL+H+QA + + +++++ + L ++DNG G+ Sbjct: 467 QGKLDLLGESLNINLYRIVQESVTNALRHAQADRIDIRLSRDENGNLTLLIKDNGIGMNM 526 Query: 544 -NAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 N ++ H+G++ MR+R Q+L G+ + + GT + VT Sbjct: 527 CNVDQNRHFGLLGMRERVQALYGNFAIDSQPGQGTAITVTIP 568 >UniRef50_A5UUR7 Multi-sensor signal transduction histidine kinase n=2 Tax=Roseiflexus RepID=A5UUR7_ROSS1 Length = 469 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 82/386 (21%), Positives = 155/386 (40%), Gaps = 16/386 (4%) Query: 223 LAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLR 282 ++ + +++ + L+ L + NRR+ A L + L + + L R Sbjct: 80 VSRQEQRYQTGLEQALRDQQRAYSQLALLSEVNRRIVDSATLDDILDAAMTFPRRLVPAR 139 Query: 283 DIELRVYDTDD-------EENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLA 335 + + + + +E + + + L L Sbjct: 140 ATAVVLLNPNGFVEARAQGMPGEELSRLRRALGIADSVATARQPQMIERSGCACLVLPLH 199 Query: 336 DSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQER------QQQLIVME 389 D G + L ++ D+ L++T+ ++ +A R + R Q + + E Sbjct: 200 DGMALLGWIELHLEDSLPVASDELALLETIANEVAEAIASARRRSREERAIYQLERAIAE 259 Query: 390 ERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELL 449 ERA IAR++HD IAQSL+ M+M+V + P+ R L +++ L +LR + Sbjct: 260 ERARIARDIHDGIAQSLAFMRMRVDLWLDWIEHDPQRLRAELLELKTTLREQIRELRRAI 319 Query: 450 TTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS 508 R Q E G L E++ + + + +D P +P ++ +EAL+ Sbjct: 320 FALRPVQFDELGFVGGLRRYIVEFAGQHNWDIDVDLTGTPSTIPPEIEAVAFRVVQEALT 379 Query: 509 NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR--SNHYGMIIMRDRAQSLRGD 566 N KH+ A+ V V + + D +++ V+D+G G A+ H G+ MR+R +LRG Sbjct: 380 NVAKHAAATRVEVMIGRVDEGLQIVVRDDGRGFDPGALPDAPGHVGLRQMRERLAALRGQ 439 Query: 567 CRVRRRESGGTEVVVTFIPEKTFTDV 592 + R GTE+ + Sbjct: 440 LTILSRPGAGTELRAWIPLPMGAREK 465 >UniRef50_A9WFF8 Histidine kinase dimerisation and phosphoacceptor region n=3 Tax=Chloroflexus RepID=A9WFF8_CHLAA Length = 466 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 91/386 (23%), Positives = 152/386 (39%), Gaps = 26/386 (6%) Query: 234 VQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDD 293 A L N+ L L++ N+R+ S A L E L + L + + D Sbjct: 81 EARMLAALRESNERLELLYEINQRVASSATLDEVLDYAITLPARLVNAGAATIVLMDEQG 140 Query: 294 EENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRL-------------ADSHTQ 340 + T + R + D+ L L Sbjct: 141 QPYTARVTGIDAGELERARTAFLLRLMTSPPDQPVVLSPHLGCNWAACLVLPLVEHDAHP 200 Query: 341 YGILLATLPQGRHLSHDQQQ-----LVDTLVEQLTATLALDRHQERQQ------QLIVME 389 G + A L +G + +Q L+ T+ +LT + R ++R + + Sbjct: 201 IGWIEAFLKEGPATLRETRQPVLQPLLATVAGELTEAVVNSRRRDRAIASIAAVERAISA 260 Query: 390 ERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELL 449 ER IAR+LHD +AQSL+ M+M++ + PE RE + + L +LR + Sbjct: 261 ERTRIARDLHDGVAQSLAFMRMRIDLWEDWLTQEPERLREEFATFKANLRRQIEELRRAI 320 Query: 450 TTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS 508 R ++ + G AL E++ + + V +D+ P +P + + +EAL+ Sbjct: 321 FALRPIEIGQLGFAGALRRFINEFAEQQDWDVSIDFAELPPDLPPVLELAAFRFVQEALN 380 Query: 509 NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS-NHYGMIIMRDRAQSLRGDC 567 N KH+QA V + + D + + V+D+G G H G+ MR+RA +L G C Sbjct: 381 NVAKHAQARRVWIKLGVRDQGLIIHVRDDGVGFNPGEEPPAGHLGLRQMRERATALDGQC 440 Query: 568 RVRRRESGGTEVVVTFIPEKTFTDVQ 593 + R GTEV V + T V Sbjct: 441 MIMSRPGDGTEVRVWLPLRYSVTTVN 466 >UniRef50_D1C419 Histidine kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C419_SPHTD Length = 437 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 14/245 (5%) Query: 355 SHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVS 414 S ++++L+D L+ A ER++Q V+EER +ARE+HD++AQ + + M + Sbjct: 186 SQERKRLIDELMATRAA------LAERERQAGVIEERQRLAREIHDTLAQGFTSIVMHLE 239 Query: 415 CLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPG--LRPALEASCEEY 472 + A + R + Q R S R L+ R + E G L AL E + Sbjct: 240 AAEPHIPAEATALRRHVEQARATARDSLNDARRLVWALRPEQLEQGGSLADALARVAERW 299 Query: 473 SAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKL 532 S G + P +P + L +I +EAL+N KH+QA V +T++ D++V L Sbjct: 300 SEDTGITAHVTVDGTPVPLPPDVEVTLFRITQEALANVRKHAQAGRVDITLSYLDDEVLL 359 Query: 533 TVQDNGCGVPENAIRS------NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 VQD+G G + + +G+ MR+R + L G + GT + V Sbjct: 360 DVQDDGVGFDRATVSATPGSVNGGFGLTGMRERLRLLGGSLMIESAPGEGTSITVALPLA 419 Query: 587 KTFTD 591 Sbjct: 420 DRVEP 424 >UniRef50_Q1IXN3 Periplasmic sensor signal transduction histidine kinase n=2 Tax=Deinococcus RepID=Q1IXN3_DEIGD Length = 564 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 78/371 (21%), Positives = 133/371 (35%), Gaps = 4/371 (1%) Query: 223 LAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLR 282 L +A L + + ++ L +A R+ L L+ + + + Sbjct: 197 LGRVWAWLAYALLSAPPDEGGARREVAALRRAAGRVALGDDLQATLADLAGQARAASTAW 256 Query: 283 DIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYG 342 + L D + P + V T + G Sbjct: 257 AVAL--TAPDGTLRARSGPDHPTLHGPGASPPAGGADVRYAASGVTLATLPVVAGGADGG 314 Query: 343 ILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSI 402 L A G ++ + ++ + L R + +ERA +ARELHDS+ Sbjct: 315 TLRALYAPGTQPGPEELAFLLSIADHAGTALHAAELIRRASERAEEQERARLARELHDSV 374 Query: 403 AQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGL 461 AQ+L + + + PE +R L ++++ LL + R L E GL Sbjct: 375 AQALYGITLGAKTARATLGRDPEKTRASLDYTIRLAEGGVSEMKALLFSLRPDALEEGGL 434 Query: 462 RPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVV 521 AL + A+ G V D + ++A+EAL N +KH++AS+V + Sbjct: 435 VAALMQNAHALEARHGLTVHADL-GREPRLSPTAQAAAYRVAQEALHNVVKHARASQVWL 493 Query: 522 TVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 +V + +V L V+D+G G A+ G MR+RAQ G V GT V + Sbjct: 494 SVREEAGRVTLEVRDDGRGFDPAALPGGTLGQRSMRERAQGTGGTLTVHSSPGAGTTVTL 553 Query: 582 TFIPEKTFTDV 592 + Sbjct: 554 ILPAAGEEVET 564 >UniRef50_D1C9Z9 GAF sensor signal transduction histidine kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9Z9_SPHTD Length = 883 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 81/432 (18%), Positives = 159/432 (36%), Gaps = 46/432 (10%) Query: 198 TQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRR 257 + R + +++ L T + ++ L + E+ + ++ L+ + R Sbjct: 460 STRVDAFDAHDLTTLRTIADQLAVALENARLFREEHER---------SRALALMLATTRA 510 Query: 258 LHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDK------ 311 S L E L + G+ + + + + D D++ T + D+ Sbjct: 511 AGSSLVLDEVLERLAEGIAEAAGVPNCAIYLLDEDEQSLVPAATVVGPRSSFDRTRVGTT 570 Query: 312 --------------------GCQLCPRGV------LPVGDRGTTLKWRLADSHTQYGILL 345 C P+ V L LA G+ Sbjct: 571 VVRVADSPTVRMVLGQREPFSCCQVPQMVGDDPALHAALGGACALAVPLAAKGRILGVAF 630 Query: 346 ATLPQG-RHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQ 404 + D+ QL+ + + + R + L + EER +A+E+HD++AQ Sbjct: 631 VFSETPCDGFTPDRIQLIRGVADSAGLAVENARLYAQSHGLAIAEERGRLAQEIHDTLAQ 690 Query: 405 SLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRP 463 L+ + + + PE + + + + + + R + R L + L Sbjct: 691 GLTAISLHLDLADAYLPHKPEQAADKVRRALELTRQNLEEARRSVLDLRAARLHQMSLPD 750 Query: 464 ALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTV 523 AL ++ G + + + + L +IA EAL+N +H+ A+ V V + Sbjct: 751 ALRRLVLTFTGDTGVEADFVVEGLVGRLSARVEMGLYRIAEEALNNVRRHATANHVRVAL 810 Query: 524 AQNDNQVKLTVQDNGCGVPENAIR---SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVV 580 ++ QV LTV+D+G G + AI +G++ +R+RA+ LRG + GT +V Sbjct: 811 TASEGQVSLTVEDDGVGFAQEAIERDNGGGFGLMSIRERARLLRGTLDLSSAPGEGTRLV 870 Query: 581 VTFIPEKTFTDV 592 VT E + Sbjct: 871 VTIPAEGRARET 882 Score = 48.8 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 28/219 (12%), Positives = 58/219 (26%), Gaps = 37/219 (16%) Query: 197 FTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANR 256 F+ + + +L + + + L S +LEQR + + L + Q R Sbjct: 292 FSSLLPFDWED-VEILASIARHTAVALENSRLLLEQRRRA---------EQLKAVNQLAR 341 Query: 257 RLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQP------------ 304 RL + ++ ++ + +L + L + D D E P Sbjct: 342 RLAAVRDPDTLIATAVDLIHDLMGYSLVYLFLVDDDTGELVLRAHSDPANPPGLRNLRLR 401 Query: 305 ---DMTCDDKGCQLCPRGVLPVGDRGTTL------------KWRLADSHTQYGILLATLP 349 + V V + + G+L Sbjct: 402 IGGPGIVAEVAATGQAIVVADVSKDPRYVSTPETANTRSETAVPILREGEVLGVLDLQST 461 Query: 350 QGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVM 388 + + T+ +QL L R + + Sbjct: 462 RVDAFDAHDLTTLRTIADQLAVALENARLFREEHERSRA 500 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 24/240 (10%), Positives = 52/240 (21%), Gaps = 38/240 (15%) Query: 184 QLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMS-------AELAESYAVLEQRVQE 236 L + +E+ +S A V Sbjct: 92 ALSLFTETLRRSLADIPGLPFDSSEIVPAAATFTRNVLGRVFPPESPEKSNAEWAGVVDV 151 Query: 237 KTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDE-- 294 TA E + L+ L R + + + L V + D + +Y+++ Sbjct: 152 MTAVRERRIARLTALGDIARAVSTTQNPQDLLEQVHAACSRIVNGDDFCIALYNSETGCI 211 Query: 295 ----------------------------ENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDR 326 Q PD + P G Sbjct: 212 TPKLLYVRGQRRRDREGQPTRNALARVVAEQQRPLAVPDYVAACADYGVTPNPEYDTGKP 271 Query: 327 GTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLI 386 + + G++ + +++ ++ L R Q++ Sbjct: 272 IPWMAAPMVQGEQTIGVISV-FSSLLPFDWEDVEILASIARHTAVALENSRLLLEQRRRA 330 >UniRef50_A6CIM0 Multi-sensor signal transduction histidine kinase n=1 Tax=Bacillus sp. SG-1 RepID=A6CIM0_9BACI Length = 619 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 77/387 (19%), Positives = 152/387 (39%), Gaps = 24/387 (6%) Query: 234 VQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDT-- 291 + GL + + L L+ +L+ P L + + L V + Sbjct: 228 LSSAIVGLRAEKKRLKSLFIITSQLNQFVPGERWLHELKHNFSEFINADAFALWVKEDGN 287 Query: 292 ----------------DDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLA 335 D E ++ + + D L L + + L Sbjct: 288 WYMQFQKGDNVQHTELDQEVANEFEEVKEPIIHGDLRTNLTKSRSLFNDRLKAFVYFPLR 347 Query: 336 DSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIA 395 G+L+A + + + + Q + TL QL T+ + +++ I++EER IA Sbjct: 348 VEKETVGMLVAARNRTKSFTDEDVQSIATLSNQLAVTIKTRMLFKEKEKRILLEERNRIA 407 Query: 396 RELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL- 454 R++HD IAQ+L+ M++ + + PE + +L+ + L S ++RE + R Sbjct: 408 RDIHDGIAQTLAGAIMKLESAGRRFNKKPEETLKLMDESVYGLRDSLREVRESIYALRPY 467 Query: 455 QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHS 514 GL A+ + E +F + + + + S L I +E+L N +KH+ Sbjct: 468 PTERVGLSKAVGSKIEAVKKEFDLNISFEIRGEEIELSSMVEKVLFDIFQESLQNVIKHA 527 Query: 515 QASEVVVTVAQNDNQVKLTVQDNGCGVP-----ENAIRSNHYGMIIMRDRAQSLRGDCRV 569 +AS + + ++ + L ++D+G G NA H+G++ + D A+ + ++ Sbjct: 528 KASSIEILLSYQSENILLRIKDDGVGFSLFQAMLNARERPHFGILQINDSAEKINASLQI 587 Query: 570 RRRESGGTEVVVTFIPEKTFTDVQGDT 596 +E GTEV + + D Sbjct: 588 DSKEGEGTEVTIIVPKMGLEGEKDYDQ 614 >UniRef50_D1C657 GAF sensor signal transduction histidine kinase n=2 Tax=Bacteria RepID=D1C657_SPHTD Length = 492 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 88/386 (22%), Positives = 144/386 (37%), Gaps = 35/386 (9%) Query: 234 VQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDD 293 + A L +NQ L L +A + S+ L L V++ + L R L + + Sbjct: 76 IGRMQASLAEQNQELLALHEAGLAITSQLDLQTVLQKVVDEARELVGARYGALTLLSEEG 135 Query: 294 EENHQEFTCQPDMTCDDKGCQLCPRGVLPV--------------------------GDRG 327 + + G + G+L V Sbjct: 136 WPEAFLTSGLTPEERERIGPEPVGHGMLGVVMSDGVVLRIPDVTKDPRSFGFPPHHPVMR 195 Query: 328 TTLKWRLADSHTQYGILLATLPQGR-HLSHDQQQLVDTLVEQLTATLALDRHQERQQQLI 386 + L + G L T +G Q ++ Q + R +R Q L Sbjct: 196 SLLAVPIRSHGRILGSLYLTEKEGASEFDAADQARLERFATQTALAIENARLHQRVQALA 255 Query: 387 VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD-ALPESSRELLSQIRNELNASWAQL 445 + EER IARE+HDS+AQ L + + Q E + E + Q+ ++A + Sbjct: 256 IAEERERIAREMHDSLAQVLGYVNTKAQAAQELLRNGQQERASEQIGQLAQAARDAYADV 315 Query: 446 RELLTTFRLQLT-EPGLRPALEASCEEYSAKFGFPVKLDYQ---LPPRLVPSHQAIHLLQ 501 RE + R L E L+ + + + G PV + + + LL+ Sbjct: 316 RENILGLRTSLEREREFLETLQDYLQRWQDQSGIPVDFRTTPAGITDLRLSPLAELQLLR 375 Query: 502 IAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN---HYGMIIMRD 558 I +EAL+N KHS AS V + ++ + TV+DNG G + I + +G+ MR+ Sbjct: 376 IIQEALANVRKHSGASRATVHIHRSAGWIGATVEDNGSGFDPSTIGRSAFPRFGLATMRE 435 Query: 559 RAQSLRGDCRVRRRESGGTEVVVTFI 584 RAQ++ G +R GT V V Sbjct: 436 RAQAVGGTLEIRSAPGEGTRVAVRLP 461 >UniRef50_B7AAT7 Histidine kinase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT7_THEAQ Length = 564 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 88/448 (19%), Positives = 149/448 (33%), Gaps = 54/448 (12%) Query: 151 TVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMA 210 VV ++ L RLL+P ++ AS + R E+ Sbjct: 152 RVVWAGLFGLLWAVGLGGALGYLFLTRLLEPLSLMVQEASRLKEGQP-ARFPEPPH-ELG 209 Query: 211 MLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSP 270 LG ALN M AE+ L + + L L Sbjct: 210 ALGRALNAMGAEVRRRERDLRLLNRLLSEMH---------------ALDLATLSERVLGL 254 Query: 271 VLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTL 330 ++ L + RV + + P + + V +G + Sbjct: 255 LVRELGFTCGDLWLSGRVVHCEACRD-----RCPLGGVASLAQEALASRQVVVRPQGVAV 309 Query: 331 KWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQL----- 385 + +G + + ++ L L L R E + Sbjct: 310 PVPPHGALVLHG-------RPEVEEAWLRAFLEALAGPLATALENARLYEALAEKEAQRA 362 Query: 386 --------IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNE 437 EERA IARELHD + Q+L+ + + + L + + ++ Sbjct: 363 RLLKAWLKAQEEERARIARELHDEVGQALTGLILGLEGLP----------GDRVEALKEL 412 Query: 438 LNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQA 496 + ++R L R L GL AL E++ + G V L L R +P Sbjct: 413 ARHTLTEVRRLALDLRPSVLDHLGLEAALRRYVREFAERTGVEVDLSLHLT-RPLPQELE 471 Query: 497 IHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIM 556 + ++ +EAL+N +HS + + V V + +V++ V+D G G A+ G++ M Sbjct: 472 TVVYRVVQEALTNVARHSGSPQASVGVVEVLGEVRVFVEDEGRGFDPEAVDPGRQGLLGM 531 Query: 557 RDRAQSLRGDCRVRRRESGGTEVVVTFI 584 R+R + L G V GT V V Sbjct: 532 RERVELLGGRLSVESAPGQGTRVQVRLP 559 >UniRef50_D1CB59 GAF sensor signal transduction histidine kinase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CB59_THET1 Length = 464 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 81/386 (20%), Positives = 158/386 (40%), Gaps = 27/386 (6%) Query: 234 VQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDD 293 V AGL +N+ L L QA + L L +++ + L R L + Sbjct: 67 VSRLQAGLAQQNKELLALHQAGLDIAGELNLESVLQKIVDQARELVGARYGALLTINESG 126 Query: 294 E-------------------ENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRG-TTLKWR 333 +T + LP + L Sbjct: 127 LVDTYITSGFSPGGVKASELGAFTSYTSDHKPIRISGKEVVAHILSLPSDQAAHSLLTVP 186 Query: 334 LADSHTQYGIL-LATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERA 392 + G L +A R + + ++ + Q + R E+ + L + EER Sbjct: 187 ILSGDKVLGNLFVAGKESAREFTEEDEETLARFATQAALAIENARLHEQVKALAIAEERE 246 Query: 393 TIARELHDSIAQSLSCMKMQVSCLQMQGDALP-ESSRELLSQIRNELNASWAQLRELLTT 451 IARE+HDS+AQ L+ + + QM + + + + LSQ+ + ++++ +RE + Sbjct: 247 RIAREMHDSLAQVLTYVTTKGHATQMLLERGELDKASKNLSQLVDAARSAYSDVREQILA 306 Query: 452 FRLQLT-EPGLRPALEASCEEYSAKFGFPVKLDYQ-LPPRLVPSHQAIHLLQIAREALSN 509 R G + +++ + G PV+LD Q + + +++I +EALSN Sbjct: 307 LRTSQERNRGFIDVIREYAQKWQDQSGIPVELDIQQGLNIRLTPTTDLQVIRIVQEALSN 366 Query: 510 ALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN---HYGMIIMRDRAQSLRGD 566 KHS A++ +T+ + D+++ +T++DNG G +++ + +G+ +MR+RA+S+ + Sbjct: 367 IRKHSGATQAWITIYKRDDRLVVTIKDNGAGFDPSSLTRSDFPRFGLAMMRERAESVGAE 426 Query: 567 CRVRRRESGGTEVVVTFIPEKTFTDV 592 + GTE+ + K+ Sbjct: 427 LNIDTGPRQGTEIRLRIPLSKSELQA 452 >UniRef50_B2JVQ4 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Burkholderia phymatum STM815 RepID=B2JVQ4_BURP8 Length = 605 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 132/606 (21%), Positives = 229/606 (37%), Gaps = 46/606 (7%) Query: 5 CLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAV 64 + L +V L++ A+ + +G +G +R Sbjct: 8 RIHRYPLYAKVCLLLACIVALITVLYLGAFMQTRGSEG---------------FRQTLFS 52 Query: 65 PLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIP-ALMRAQNRETV 123 QTA E L L WR P + Sbjct: 53 LDEAMRLDRKAASLQTASPDTARALRELADSLVSNDTLLTDWRQRGAPTPEIGGALAAAN 112 Query: 124 SADVSQFVAGLDQ---LVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWL-----R 175 ++ + D + + E V ++ LL+F ++ L R Sbjct: 113 ASAAPEHTGKPDAKLAALGALRAHVAYQREVHAAVLGLLQACTVCLLIFGVVSLAWGARR 172 Query: 176 ARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQ 235 + +P L A+ GR+E+ L ++ L + + Sbjct: 173 TLVARPRAALQALVET------GLSVP-QGRDEIERLLKLQAELAVRLRTEQDESVRLKR 225 Query: 236 EKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEE 295 + +Q L L +L P L +L L + + I L V ++ + Sbjct: 226 IVEDYITFADQSLELLHHICAQLAEEEPSGRTLEALLQRLVGVLRAQRIALVVTESTAQL 285 Query: 296 NHQEFTCQP--------DMTCDDKGCQLCPRGVLPVGDRG----TTLKWRLADSHTQYGI 343 + P ++ L P D G L + YG+ Sbjct: 286 LDIDPVVAPNGDVPAIVRSRVTNELMTLAGTHTFPPLDNGEVPPPVLAAPVRVPLASYGV 345 Query: 344 LLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIA 403 L+A L++T+ L ++ R +++ + EER IARELHDS+A Sbjct: 346 LIAEGEPETRFELRHLYLIETIASVLAHAISNLSRDVRDRRMALFEERNAIARELHDSLA 405 Query: 404 QSLSCMKMQVSCLQMQGDAL--PESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGL 461 QSLS MK+Q++ LQ E+ IR +++++ QLRELLTTFR + GL Sbjct: 406 QSLSYMKIQLARLQAVLPPELSQSDIAEIARGIREGIDSAYRQLRELLTTFRSPMHAHGL 465 Query: 462 RPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVV 521 LE EE+ ++ + +D ++P + ++ +H+ QI REAL+N L+H++A+ V Sbjct: 466 ASTLEELAEEFGSRSEVQISIDNRVPRMRLSVNEEMHVAQIVREALTNVLRHARATTAQV 525 Query: 522 TVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 + + + +++ D+G G+ +HYG+ IMR+RA+SL G V+ G+ VV+ Sbjct: 526 QLMSDGRTMTVSIDDDGRGINRTEGDEHHYGLSIMRERARSLGGRLEVKPA-ERGSRVVL 584 Query: 582 TFIPEK 587 TF+P Sbjct: 585 TFVPTA 590 >UniRef50_Q025Z0 Histidine kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q025Z0_SOLUE Length = 969 Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 74/338 (21%), Positives = 133/338 (39%), Gaps = 5/338 (1%) Query: 253 QANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKG 312 + + AP+ + L +R + + + + Sbjct: 631 HIVQMTANGAPVDLTQAARLGPSSERIQVRYTGIHLSAPERVQYFYRLEGLDSDWVPAGS 690 Query: 313 CQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTAT 372 +L L G ++ L + + + + LV + Sbjct: 691 RRLINYNSLRHGKYRFVVRAELPGGPSSTESYEFEMRPQFWETAWFRALVGLAMLGAAWA 750 Query: 373 LALDRHQE-RQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELL 431 + R ++ R + +V+EERA +ARE+HD++AQ + Q+ + M A +R L Sbjct: 751 IYQLRLRQIRSRFALVLEERARLAREIHDTLAQGFVGISSQLDAVAMSMPAEATPARGYL 810 Query: 432 SQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRL 490 R S + R + R L L A+++ +A V +D P Sbjct: 811 DLARRMARHSLTEARRSVMDLRASALEGQDLAAAIQSGTLLLTAGSNVKVSVDVSGPVTE 870 Query: 491 VPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN---AIR 547 +P HLL+I +EA++N LKH+ A + V + ++ L + D+G G ++ A R Sbjct: 871 LPEEMEQHLLRIVQEAVTNVLKHAAARNIWVKIRVEPRKLYLAILDDGRGFDQHDVFASR 930 Query: 548 SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 H+G+I MR+RA+ L G+ R+ GT+V VT Sbjct: 931 GGHFGVIGMRERAERLGGELRLASHPGEGTQVEVTVPL 968 >UniRef50_D1CE67 Multi-sensor signal transduction histidine kinase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CE67_THET1 Length = 748 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 78/382 (20%), Positives = 144/382 (37%), Gaps = 21/382 (5%) Query: 219 MSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNL 278 ++ E A + L++ + E+ + ++ L + + L + L Sbjct: 374 LAVENARLLSDLQKSEAQYRLVTENASDLIFLLNPDGSISFASSSAKAILGYQPDELLGK 433 Query: 279 TLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSH 338 + + E P D+ C + L+ Sbjct: 434 MFAD-----LISPQSKRITPECLINPS--TADELSIRCEIEAIRKDGNSVFLEISCTPVF 486 Query: 339 TQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQER------QQQLIVMEERA 392 G+ R ++ +++++ + + + +E+ EER Sbjct: 487 EN-GVFRGEQGTARDIT-EKKRMEREIARRQRQLRRSQKREEQLSGYAAAVIAAQEEERR 544 Query: 393 TIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTF 452 IAR+LHD AQ+L + ++ L+ LPE+++ + ++ + + A +R Sbjct: 545 RIARDLHDDTAQALIALSRRIDSLREDLGDLPEAAQRKIEDLKALTDQTLASVRRFSRDL 604 Query: 453 RLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNAL 511 R L + GL PALE E + ++ +L Q R + + L +IA+EAL+N Sbjct: 605 RPSILDDLGLVPALEWLVSENAKRYKITTRLKIQGEERRLQPEVELALFRIAQEALNNTA 664 Query: 512 KHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENA-----IRSNHYGMIIMRDRAQSLRGD 566 KHSQA+ V + D +LTV DNG G G++ M +RA L G+ Sbjct: 665 KHSQATGAAVELTFGDTWCRLTVSDNGIGFQTPPNISELADRGRMGVMGMYERANLLGGN 724 Query: 567 CRVRRRESGGTEVVVTFIPEKT 588 VR GT + VT ++ Sbjct: 725 LYVRTAPGQGTRITVTVPLIES 746 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 18/183 (9%), Positives = 50/183 (27%), Gaps = 29/183 (15%) Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ 298 ++ Q + L + A L + L+ + +T + + D + + + Sbjct: 22 RTVDQTTQKIFTLNAIAAAISREADLDKVFYLALDWILEVTGADAGTVFLRDEETGDLVR 81 Query: 299 EFTC---------QPDMTCDDKGCQLCPRGVLPVGDRG-----------------TTLKW 332 + Q + R P+ + + Sbjct: 82 VVSRGISNLFLTEQERHSYGIGLASRVIRAESPIVLDNVARSSMISPSSYGDVVKSCVGI 141 Query: 333 RLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRH---QERQQQLIVME 389 L + G+L Q +L+ ++ Q+ +A + + ++ + + Sbjct: 142 PLRSDNKVVGVLNIFSKQVNKFEPADIELLTSIGNQIGVAVAKAKLSSTVTQSREQLQEK 201 Query: 390 ERA 392 R Sbjct: 202 MRQ 204 >UniRef50_Q67MG9 Sensor protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG9_SYMTH Length = 558 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 69/396 (17%), Positives = 135/396 (34%), Gaps = 50/396 (12%) Query: 246 QILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPD 305 + + + RL+ L L L + + +++ + + +T Sbjct: 148 RAVRLFSRTLERLNRPLGLQAALDEALRLVAEMLNVKEGWILLRTEGRGGAEGAWTIGAA 207 Query: 306 MTCDDKGCQLCPRGVLPV-------------------------------GDRGTTLKWRL 334 + P+ G + L Sbjct: 208 YGFPEWAQAGVQAQHFPIDRCLCLRHLTGPTLVTQVRDLACVRATAEVGHPSGRHITIPL 267 Query: 335 ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQ---------- 384 GI++ +P R+LS ++++ L EQ+ + R ++ + Sbjct: 268 GQGGKVAGIMVLMIPPSRYLSPSDREILTALGEQIGLAIDRARLYDQLAEKERLRGRLLA 327 Query: 385 ---LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNAS 441 +ER IARELHD I Q+L+ + + + L E R+ L ++ Sbjct: 328 RLITAQEDERRRIARELHDEIGQALTALVVTLDFLVRH-PLSEEMLRQRLVAVKEMAETG 386 Query: 442 WAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLL 500 ++R ++ R L + GL A+ Y G + + + +P + I + Sbjct: 387 LTEVRRVIHEMRPTALDDLGLEAAIRWLVRRY-EDAGLKIDVQIEGLEERLPDYIEITVF 445 Query: 501 QIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRA 560 ++ +EA +N +KH+ AS + + + N + + V D+G G R G+ +R+R Sbjct: 446 RLIQEACTNTVKHAAASHIRIALRHRGNWLTVEVTDDGKGFDIK-RRGEGVGLTGIRERV 504 Query: 561 QSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDT 596 G + GT V E +GDT Sbjct: 505 SLAGGKLTIESGPDSGTRVYAELPVEGAM--QRGDT 538 >UniRef50_B9XNW0 Multi-sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XNW0_9BACT Length = 1382 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 69/282 (24%), Positives = 128/282 (45%), Gaps = 3/282 (1%) Query: 309 DDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQ 368 D + + L T L + + GI+ + R ++ +L L Q Sbjct: 1100 DRDPVMVTLKKYLHELGVRTVLFVPMLIAGHVEGIVSIRFTRKRSFRREEIELPQALAHQ 1159 Query: 369 LTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG-DALPESS 427 + L R ++ ++ VM ER +AR++HD++AQ + + +Q+ G L Sbjct: 1160 AMLAIQLMRLSQQSREAAVMAERNRMARDIHDTLAQGFTGVIVQLEAAADAGSQGLVVEV 1219 Query: 428 RELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQL 486 E L++ + S + R + R L L ALE ++ +A K D Q Sbjct: 1220 AEHLNRAGDLARESLREARRSVRALRPLALEGKNLFKALEGLIQKMTAGTTMRAKFDLQG 1279 Query: 487 PPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI 546 P ++PS +LL+I +E +NAL+H++ASE + + ++L +QDNG G A Sbjct: 1280 EPCVIPSEWEDNLLRIGQEVFTNALRHARASEFKARLVFSAQALQLELQDNGQGFDP-AR 1338 Query: 547 RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 + + +G++ +R+R +S+RG ++ GT V++ + Sbjct: 1339 QHDGFGLLGIRERVESMRGQLSIQSTNGEGTAVLIILPLTEN 1380 >UniRef50_A5FQK5 Multi-sensor signal transduction histidine kinase n=5 Tax=Dehalococcoides RepID=A5FQK5_DEHSB Length = 1229 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 77/372 (20%), Positives = 147/372 (39%), Gaps = 17/372 (4%) Query: 233 RVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTD 292 RV + + L + RR L + + + + + + Sbjct: 862 RVLGTVQDVTERKLAEEALRDSERR---YRLLADNMVAFIWTIDEHLNTSYLSPSIIHLL 918 Query: 293 DEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKW-RLADSHTQY-GILLATLPQ 350 + M + + V G+ L L + G ++ T Sbjct: 919 NYYPEDILGKHISMIFTSESYEKLLDVYQQVRKTGSELIVNPLELEVKRQDGKVIITDTL 978 Query: 351 GRHLSHDQQQLV------DTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQ 404 R L + + + E+ A L +R +L EERATIARELHD + Q Sbjct: 979 MRPLYDENHHFLGILGASRDISERKAAEYELHTLSQRLVEL-QEEERATIARELHDQVGQ 1037 Query: 405 SLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRP 463 SL+ +K+ + + D+LP+ S +LL++ + ++ + +R + R + L + GL P Sbjct: 1038 SLTVLKLMLDKAK---DSLPDRSEKLLAEAQPLVSELISSVRNMSLDLRPRMLDDLGLLP 1094 Query: 464 ALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTV 523 AL + +S++ G V + R + +I +EAL+N ++++ V+V Sbjct: 1095 ALLWYFDRFSSQTGINVNFQHAGLKRKFSPQLGTAVYRIIQEALTNVVRYAGVDHVLVRA 1154 Query: 524 AQNDNQVKLTVQDNGCGVPENAIRSN-HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVT 582 + NQ+ L +QD+G G + G+ M++R + L G + + GT ++V Sbjct: 1155 RADKNQLALVIQDSGKGFNPAQRATGMSSGLKGMKERVRFLGGKLDIESKPGEGTHIIVE 1214 Query: 583 FIPEKTFTDVQG 594 + + G Sbjct: 1215 LPLNEEMGRING 1226 >UniRef50_B2TAX2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2TAX2_BURPP Length = 748 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 65/317 (20%), Positives = 127/317 (40%), Gaps = 11/317 (3%) Query: 270 PVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTT 329 +NG++ + + D+ E + G + L G Sbjct: 436 EQVNGMRAADAIDKAPAELSDSVMPELRMITATLEQVMASGIGA----KVDLTSEKNGKP 491 Query: 330 LKWRLAD--SHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIV 387 + W ++ H G + L ++ + + L + AL + ++ Sbjct: 492 VGWHVSAVPEHGANGDIRGALTIWTDITERMEVELR-----LRESYALLQELTSLRETAR 546 Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRE 447 EER IARE+HD + Q L+ +++ VS ++++ + + + + +R Sbjct: 547 EEERKRIAREMHDELGQQLTALRLGVSAMRIEFAQDDPALAGRFRDLLALADDTMQVVRN 606 Query: 448 LLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 ++ + R + G+ ALE E+S L ++ +AI L +I +EAL Sbjct: 607 VVASLRPAAIDAGIVAALEWLAAEFSRDGRVACHLRIPDDNLVLDEARAIALFRIVQEAL 666 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDC 567 +N +H+ A++V +++ Q L + D+GCG A R +G++ MR+R L G+ Sbjct: 667 TNVARHAAATQVTISLEQTGRCWVLEISDDGCGFDSMAARMKSFGLVGMRERVLMLGGEI 726 Query: 568 RVRRRESGGTEVVVTFI 584 V GT + V Sbjct: 727 SVCSAPGSGTSITVCIP 743 >UniRef50_A3DEX1 Histidine kinase n=5 Tax=Clostridium RepID=A3DEX1_CLOTH Length = 392 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 52/229 (22%), Positives = 108/229 (47%), Gaps = 7/229 (3%) Query: 373 LALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLS 432 + R + EER +ARE+HD AQS+S + ++ + D+ PE +++ L Sbjct: 164 MKQRRLLGIRIIKAQEEERQRVAREIHDGPAQSMSNIVLKAEICERLVDSDPEKAKDELR 223 Query: 433 QIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLV 491 +++ + + +R+++ R L + GL P L+ E + G + + + Sbjct: 224 TLKSVVRDTLRDVRKIIYDLRPMSLDDLGLIPTLQRYIETCREESGIKITFKTRGTCEQL 283 Query: 492 PSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN-- 549 ++ + ++ +EA++N KH++A +V + + + ++KL + DNG G ++++SN Sbjct: 284 KPVVSLTVFRLVQEAVNNIKKHARADKVTINLEFLEKELKLYIADNGVGFDFDSLKSNEE 343 Query: 550 ----HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQG 594 +G+I MR+R + L G + GT + +T G Sbjct: 344 DINKGFGLISMRERVELLDGKFEIDSAVGKGTRLNITVPLLPEEGVSNG 392 >UniRef50_C1CWD4 Putative histidine kinase, classic; putative membrane protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1CWD4_DEIDV Length = 575 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 94/465 (20%), Positives = 163/465 (35%), Gaps = 17/465 (3%) Query: 145 TEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQR---- 200 + R +V +A ++LV + + A L P L A V R++T Sbjct: 115 STYRALLFHVVQLPLAAMCWMVLVALLAVMIAGLSAPLWVLSPGAPPVVWREWTLVPDES 174 Query: 201 ----ANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANR 256 ++G +LG LN M + L + E + + L +A Sbjct: 175 VVVGLILTGAGSALVLGGVLNLMGR----LWTRLTLGLLAPDRRDEAARREVVALRRAAG 230 Query: 257 RLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDT---DDEENHQEFTCQPDMTCDDKGC 313 R+ L L+ + + R + L D G Sbjct: 231 RVALGDDLGVTLTDLATQAWTASTARSVALVAPDGTPHATSGEGHPALSGLPERTPVPGE 290 Query: 314 QLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATL 373 + + G L A G ++ + ++ + L Sbjct: 291 ANVQVTADGATLVTLPVTLPPSAGTLDGGTLRAVYQGGTRPGAEELAFLLSIADHAGTAL 350 Query: 374 ALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQ 433 + ER +ERA +ARELHDS+AQ+L + + + D P +RE L Sbjct: 351 HASQLIERAGARAGEQERARLARELHDSVAQALYGITLGAKTARATLDRDPGRARESLDY 410 Query: 434 IRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVP 492 ++++ LL + R L E GL AL A+ G V + + P + Sbjct: 411 TIRLAEGGVSEMKALLFSLRPDALEEGGLIAALTQHAHALEARHGLRVHAELRAEP-HLT 469 Query: 493 SHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYG 552 ++A+EAL N +KH++A++V + V ++ V ++V+D+G G + G Sbjct: 470 PDAQAAAYRVAQEALHNVVKHARATQVWLCVHESLGVVTVSVRDDGRGFDPASQGRGTLG 529 Query: 553 MIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTH 597 MR+RA G V+ GT V + + + H Sbjct: 530 QRSMRERAAGAGGTLDVQSAPGEGTIVTLRIPAASAAPLQREEAH 574 >UniRef50_C6CGT0 PAS/PAC sensor signal transduction histidine kinase n=11 Tax=Enterobacteriaceae RepID=C6CGT0_DICZE Length = 546 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 71/358 (19%), Positives = 144/358 (40%), Gaps = 12/358 (3%) Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVY--DTDDEEN 296 + + Q + + + L + N L + Sbjct: 185 RDIRERKQNEQLAYAREQEFRALVENTPDLVTRFDTQLNCQYANPAVLAHLRFTAEQLHG 244 Query: 297 HQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSH 356 + P+ C + QL V L+ + + T++ ++ Sbjct: 245 RRLTDLLPNARCAQRILQLVQMVVDTQSSVEGELEEDIGMTTTRHRVIHHIRCVPEFDQR 304 Query: 357 DQQQLVDTLVEQLTATLALD----------RHQERQQQLIVMEERATIARELHDSIAQSL 406 + + T+ +TA + R RQ+++ EER IARE+HD + Q L Sbjct: 305 GKLISILTVGRDITAIRYAEKKLEDSHMQLRLLARQREISREEERKHIAREIHDELGQHL 364 Query: 407 SCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALE 466 + M+M +S ++MQ L + + + +R + T R + + GL PALE Sbjct: 365 TSMRMSLSLMRMQFARDNPHMLTQLQNLMALSDKTIQVVRHVATRLRPNVLDMGLTPALE 424 Query: 467 ASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN 526 +++ ++ P L P ++ A ++ +E+L+N +H++A++VV+++ Sbjct: 425 WLRDDFIRQYRCPCLLHAPEPEVVLNDECATAAFRVVQESLTNIARHAEATQVVISLENR 484 Query: 527 DNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 + + L+V DNG G + N +G++ M++R + L G+ + + GT V +TF Sbjct: 485 EGLIVLSVHDNGKGFDAQTRKPNAFGLMSMKERGRMLGGEVVIESQPGAGTLVRLTFP 542 >UniRef50_C3B362 Two-component sensor protein yhcY n=4 Tax=Bacillus RepID=C3B362_BACMY Length = 374 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 71/374 (18%), Positives = 141/374 (37%), Gaps = 38/374 (10%) Query: 242 EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFT 301 E + + L L + L+ L E L VL+ L + L+ + D Sbjct: 7 EKQMRRLEALKEIAELLNEATDLQEMLEKVLHTLLQVMNLQTGWIFFIDEKGTHRMLVDR 66 Query: 302 CQPDMTCDDKGCQLCPRGVLPVG-------------------------------DRGTTL 330 P + +C V + Sbjct: 67 NLPPALTWREKKPMCEGDCWCVNRFVNGRLEKATNIIECKRIEDAIEYNWGETEEITHHA 126 Query: 331 KWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEE 390 L ++G+L P H S ++ L++ + Q+ T+ R E++++ +++ E Sbjct: 127 TIPLRAGSEKFGLLNVASPHKTHFSEEELALLEAIAFQIGTTIQRIRLVEKERKYVIVAE 186 Query: 391 RATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLT 450 R +AR+LHDS+ Q L + + A + +E+L I + ++ L+ Sbjct: 187 RNRLARDLHDSVKQLLFSIMLTARGTLDM--AKDKELQEMLRYIGELSQEALQEMTLLIW 244 Query: 451 TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNA 510 R + E GL A + Y G V + + L ++++EAL N Sbjct: 245 QLRPEGLEKGLAEA----VQNYGKLLGIQVAIRIDG-VISIGDEIEEVLWRVSQEALHNC 299 Query: 511 LKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVR 570 KH+ V V++ +N++ ++D+G G +R + G+ M++R + ++G R+R Sbjct: 300 KKHASCERVSVSLKIENNKLNFQIEDDGIGFIRETVRDSALGLKSMKERIELMKGTFRIR 359 Query: 571 RRESGGTEVVVTFI 584 + GT++ + Sbjct: 360 TKPGQGTKIEIQLP 373 >UniRef50_B4WQU2 GAF domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WQU2_9SYNE Length = 1769 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 81/422 (19%), Positives = 148/422 (35%), Gaps = 48/422 (11%) Query: 210 AMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLS 269 A L L ++ E + A+L+++ + + + L + L + L + L Sbjct: 1346 ATLAIQLTRLAEEAKQ-TAILQEQERAARQHVTELAKTNDALSETLTALTATPELNDFLG 1404 Query: 270 PVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQ------------PDMTCDDKGCQLCP 317 L+ + L +YD Q T Q PD+ L Sbjct: 1405 QNLSKMAEQVGANAAHLFLYDAAAHTLRQHITVQDGKVYQGNAPTDPDIFRHPIPANLTR 1464 Query: 318 RGVLPV-----------GDRGTTLKWR------------------LADSHTQYGILLATL 348 + V W + G + Sbjct: 1465 AWEIVVNSSKPFTLDENHPDAIEFFWPESILWHQAQGHTSAVCACMKVGDQPLGFIGFAF 1524 Query: 349 PQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQ----QLIVMEERATIARELHDSIAQ 404 L+ +Q Q + L Q T +L L R E Q + ER +ARE+HD++AQ Sbjct: 1525 TDRTLLTEEQLQFIQALTNQATLSLHLTRLAEAAQTNALSSALTSERNRLAREIHDTLAQ 1584 Query: 405 SLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRP 463 + + + +Q+ + E S + + ++ R + R L L Sbjct: 1585 AFTGVSLQLEAAKAAAPDNLEDSTYHIDRAGQLARRGLSEARRSVHALRSQALETDTLPN 1644 Query: 464 ALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTV 523 AL + E + + P +P + +LL+I +EA++NAL+H+QA + + + Sbjct: 1645 ALRTALYEMTQSSPTQPHFRLKGTPFALPENIQTNLLRIGQEAITNALRHAQADNLTLLL 1704 Query: 524 AQNDNQVKLTVQDNGCGVPENAIRS-NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVT 582 + QV+L+V D+G G ++ +G++ MR+R G GT + +T Sbjct: 1705 EFSPAQVRLSVTDDGTGCEISSFSELEGFGLMGMRERVYRFDGHFSFTSHPRRGTVIDIT 1764 Query: 583 FI 584 Sbjct: 1765 IP 1766 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 82/290 (28%), Gaps = 69/290 (23%) Query: 210 AMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLS 269 A++ L +S E ++ A+L++R + + L ++ L + L L Sbjct: 1147 AIVAIQLTRLSEEAKQA-AILQEREKAAKKRAAQLTRSNQALKRSLDSLAQQPELEAFLQ 1205 Query: 270 PVLNGLQNLTLLRDIELRVYDT----------------DDEENHQEFTCQP--------- 304 V++ T + L + D E +P Sbjct: 1206 RVVDEAAAQTGAKSGHLFLVDEKANCWFLQVSTDNGGDWRSVADMELWQRPLPLDAAPEF 1265 Query: 305 ----------------DMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATL 348 + + + + L G L Sbjct: 1266 SAKILQKQPIVIENLRETLRPGPHIWEPSIAWHLQRNHTSIICVPLVLGDRVLGFLGLPF 1325 Query: 349 PQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIAR------------ 396 H++ D +L L Q T + L R E +Q +++E+ AR Sbjct: 1326 VGATHITQDDIELAQALANQATLAIQLTRLAEEAKQTAILQEQERAARQHVTELAKTNDA 1385 Query: 397 ------------ELHDSIAQSLSCMKMQVSCLQMQG---DALPESSRELL 431 EL+D + Q+LS M QV DA + R+ + Sbjct: 1386 LSETLTALTATPELNDFLGQNLSKMAEQVGANAAHLFLYDAAAHTLRQHI 1435 Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 52/210 (24%), Gaps = 41/210 (19%) Query: 224 AESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRD 283 AVL +R + + + Q L + L + L +L + Sbjct: 961 ESEKAVLAEREKAAKKRAAQLAKTNEAIAQTLTTLAASPELDQFLGTILAEMSRQLNAAK 1020 Query: 284 IELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDR----------------- 326 + L +YD Q Q G P+ Sbjct: 1021 VHLFLYDQPTHTLTQRVVVQAGEMYLGVGPDDPEMFRRPIPADITPAWERIINGDKPLTY 1080 Query: 327 ------------GTTLKW------------RLADSHTQYGILLATLPQGRHLSHDQQQLV 362 T+ W L G + LS +Q + + Sbjct: 1081 DETQPIDEEIWWPETVAWHQAQGHKAITCIPLRAGDVPIGFIGYAFYDRTFLSDEQLEFM 1140 Query: 363 DTLVEQLTATLALDRHQERQQQLIVMEERA 392 L Q + L R E +Q +++ER Sbjct: 1141 QALANQAIVAIQLTRLSEEAKQAAILQERE 1170 >UniRef50_A9B1S5 Multi-sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B1S5_HERA2 Length = 665 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 87/386 (22%), Positives = 148/386 (38%), Gaps = 25/386 (6%) Query: 222 ELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLL 281 + A L A E + ++ L + R + S L E L + Sbjct: 279 ANFANQAALALHNSHLFAAAERRATEMALLLEMTRTVGSTLHLPEVLLRAAAAIGEALHA 338 Query: 282 RDIELRVYDTDDEENHQEFTCQPDMT--------------------CDDKGCQLCPRGVL 321 D+ + + D E + D +GC V Sbjct: 339 EDVLVLLLDEQGERLTPQAGAMGDHNYLRMRWASPTSLSNEPTLAKVIKQGCARVIHAVS 398 Query: 322 PVGDRGTTLKWRLADSHTQYGILLATLP-QGRHLSHDQQQLVDTLVEQLTATLALDRHQE 380 P T L L+ G++L P + Q L + L + R + Sbjct: 399 PTIPYQTLLALPLSIKEQVLGVVLVATPDRDAPFGPQQLVLAEGLATSAAIAIEQARLYD 458 Query: 381 RQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNA 440 + ++ EER+ +ARELHDS+ Q+L M + + Q + P + + +++ + Sbjct: 459 QARRAAQAEERSRLARELHDSVTQTLFSMTLTAEAARAQVERNPVRAATQIDRLKAAAHQ 518 Query: 441 SWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHL 499 S ++RELL R L E G+ +L +A+ + L+ + ++ A L Sbjct: 519 SLGEMRELLLQLRPTPLQEHGIIKSLRDHIASLNAQ-EVAINLECEGEDSVLSPANAAGL 577 Query: 500 LQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN--AIRSNHYGMIIMR 557 +IA+EA++NAL+H+QA+ V V+ + L V+DNGCG + H G+ M Sbjct: 578 YRIAQEAIANALRHAQATNVRVSFSFASKSTTLMVKDNGCGFDPDLLERSGRHLGLTSMA 637 Query: 558 DRAQSLRGDCRVRRRESGGTEVVVTF 583 +RA L G V+ GT + V Sbjct: 638 ERAGELGGTLDVQSVVGEGTCLTVHL 663 >UniRef50_B8FFK0 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FFK0_DESAA Length = 832 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 73/402 (18%), Positives = 146/402 (36%), Gaps = 21/402 (5%) Query: 185 LLAMASAVSHRDFTQRANISGR-NEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEH 243 L A+ +F + +S E ALN +L++ LE++V +T + Sbjct: 440 LSAIGERDEEGNFVRSLAVSVDVTEQKKAQEALNQAQEKLSQHSQELERQVFRRTEEISS 499 Query: 244 KNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQ 303 + L R V + + + + ++R + + Sbjct: 500 ILKYTPNLVHI-------KDADGRYIMVNRRYEEIFGISNEDVRGRTQHESMPREYADAF 552 Query: 304 PDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVD 363 ++ R + + R+ Y + + + H + Sbjct: 553 REV---------DHRVLSEKKPVRSEYVVRVDGEDHSYLSVKFPIYDEQGRIHAIGGIST 603 Query: 364 TLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDAL 423 + E A AL R R + ER IARELHD + Q L+ ++M + + Sbjct: 604 DVTEIKKAQEALRRLSNRMI-ISQEAERQAIARELHDELGQILTVLRMDAVWFKKRLKDS 662 Query: 424 PESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKL 482 +++E S + ++ + +R + R L + GL ALE ++ + G Sbjct: 663 DAATQERASAMCELIDKTIEDVRGIAVRLRPGVLDDLGLVDALEWYTSDFERRTGITCIF 722 Query: 483 DYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP 542 ++ + + + +IA+EAL+N ++H+ V+++ + + L + DNG G Sbjct: 723 EHD-NIPNLGNAISTAAYRIAQEALTNVVRHASTDRADVSLSFDQEEFTLIISDNGVGYD 781 Query: 543 ENAI-RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + S G+ MR+RA G V E G+ ++ Sbjct: 782 GGMVEESEGLGIAGMRERAMLAGGTLEVEAGEDAGSRIIFRI 823 >UniRef50_B8D0J3 Histidine kinase n=2 Tax=Clostridia RepID=B8D0J3_HALOH Length = 391 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 73/381 (19%), Positives = 166/381 (43%), Gaps = 16/381 (4%) Query: 228 AVLEQRVQEKTAGLEHKNQILSFLWQANRRLH-----SRAPLCERLSPVLNGLQNLTLLR 282 LE+ +++ L + + + ++ RR + + E ++ V+ + L + Sbjct: 9 RSLEKILEKTVEVLAESKKEIFTIAESIRREYDNIKRELDLINEEINEVVAKVDKLQEVN 68 Query: 283 D-IELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQY 341 +R+ + + + D+ + + + + ++ LK R A+ + Sbjct: 69 RIARIRLMEVSRDFEKH---SEYDIKYAYQQAEDTSVQIAVLREKEEQLKKRRAELENRL 125 Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLI------VMEERATIA 395 L + + ++ + D L+ +L+ ++QQL +ER +A Sbjct: 126 INLKRNIEKAENMVSRVGVVHDYLLGELSNLSEQFDDLRQKQQLAIKIIQAQEDERKRVA 185 Query: 396 RELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL- 454 RE+HD AQS++ + +V Q D + +R L ++ + S ++R+++ R Sbjct: 186 REIHDGPAQSIANLVFRVELAQKLMDKDLKKARNELEDVKELVRLSMQEVRKIIYDLRPM 245 Query: 455 QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHS 514 L + GL P L +++ + + + P R +P+ I + ++ +E L+N KHS Sbjct: 246 SLDDLGLIPTLRRYINKFNEQTKIIIDFNILGPKRRLPNTYEITIFRLIQEGLNNIYKHS 305 Query: 515 QASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRES 574 +AS VT+ Q+ + + D+G G + +N +G++ MR+R + L G + ++ Sbjct: 306 KASTGTVTLEYTPEQINILISDDGIGFKPEEVGANKFGLVSMRERCELLGGKLDLFSEKN 365 Query: 575 GGTEVVVTFIPEKTFTDVQGD 595 GT++ +T ++ + D Sbjct: 366 KGTKIKITLPIKQRGGKDEAD 386 >UniRef50_C4XMF3 Two-component sensor histidine kinase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF3_DESMR Length = 704 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 93/468 (19%), Positives = 157/468 (33%), Gaps = 40/468 (8%) Query: 138 VSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDF 197 VS + + + + + + ++ +L L + + Sbjct: 259 VSMPRSIHQQGRLLERAMVGSLTTIGIMFGLAMLYFVERFILSRVTGLGQEIAQLGQGSR 318 Query: 198 TQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRR 257 + ++G +E++ L A+N M EL + A + G+ Sbjct: 319 KRVTPLAGNDEVSALSRAVNLMLDELDAARAHYVMATRAAKVGVWE-------------- 364 Query: 258 LHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCP 317 L L ++ + + D + D + L Sbjct: 365 --------------LQPDAGLIVVDPVIAGLLGYDSPGQPEALALWLDRLAPEDRDSLVR 410 Query: 318 RGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVE--QLTATLAL 375 G + R+ + L +LV T V+ +L Sbjct: 411 PGQHLFDKPTFERELRVVAAQGGVLCFLCRGQFVPGADGSPSRLVATAVDITELKQAAES 470 Query: 376 DRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIR 435 R + ERA+IAR+LHD++AQ LS +K+ L + + R+ L Sbjct: 471 IRALSGRLMQAQESERASIARDLHDNVAQDLSSLKIAYETLLDGLADVDAALRQRLEAAS 530 Query: 436 NELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLD-YQLPPRLVPS 493 L + A +REL R L GL AL +E G V L V + Sbjct: 531 GLLARTIASVRELAYGLRPPNLEHLGLDQALRRLSQEMGQASGLAVSYAGVGLEGLDVDA 590 Query: 494 HQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP--------ENA 545 AI+L +IA+EAL+N KH+ AS V + + ++ ++ L ++D+G G Sbjct: 591 DVAINLFRIAQEALANVRKHAGASRVEMRLIESYPKLILRIRDDGRGFDAVREHGDCPGE 650 Query: 546 IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQ 593 G+I MR+RA G RV GT VV + Q Sbjct: 651 ASRPCMGLINMRERAGLFGGSLRVISSPGHGTTVVAEVPYAGEVSHAQ 698 >UniRef50_B9L060 Putative two component system histidine kinase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L060_THERP Length = 473 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 90/380 (23%), Positives = 146/380 (38%), Gaps = 34/380 (8%) Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEEN-- 296 L ++ L+ L +A + + L L V++ + L R L V D + Sbjct: 75 RRLLMQHAELAALHEAGVAITADLDLALVLQRVIDEARRLAGARYGLLIVLDDQGQRTLF 134 Query: 297 ----HQEFTCQPDMTCDDKGCQLCPRGVLPV------------------GDRGTTLKWRL 334 + C+ + + R P+ + L + Sbjct: 135 TSGYPRTARCEQSTMGEHGILEAVLRDDRPLNIEDLDRYPGTRHYPEGHPTMRSLLGVPI 194 Query: 335 ADSHTQYGIL-LATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERAT 393 G L LA G+ + ++ Q +A R R L V EER Sbjct: 195 RSQEGVLGGLYLADREDGQPFDEHDRSRLERFATQAALAIANARLHRRLMSLAVHEERER 254 Query: 394 IARELHDSIAQSLSCMKMQVSCLQMQGDALP--ESSRELLSQIRNELNASWAQLRELLTT 451 IARE+HDS+AQ L + +VS L+ + L Q+ ++A +RE + Sbjct: 255 IAREMHDSLAQVLGYVITKVSALRELLRQPDRLAEAERHLEQLERAARDAYADVREAILG 314 Query: 452 FRLQLT-EPGLRPALEASCEEYSAKFGFPVKLDYQLPP---RLVPSHQAIHLLQIAREAL 507 R L L AL + E + + G +L + R + + LL+I +EAL Sbjct: 315 LRTGLAPNRSLVDALRSYVERWQDQSGVNARLIVEPSDDSLRGLQPMAELQLLRIVQEAL 374 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN---HYGMIIMRDRAQSLR 564 +N KH++A+EV V +A+ D V + V DNG G A+ +G+ MR+RA+++ Sbjct: 375 TNVRKHARATEVTVQLARLDGTVCVRVADNGIGFDPGALERGQFPRFGLATMRERAEAVG 434 Query: 565 GDCRVRRRESGGTEVVVTFI 584 G RV GT V Sbjct: 435 GRLRVTSLPGQGTTVEAVLP 454 >UniRef50_B2T8J5 Multi-sensor signal transduction histidine kinase n=10 Tax=Burkholderia RepID=B2T8J5_BURPP Length = 553 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 81/397 (20%), Positives = 150/397 (37%), Gaps = 18/397 (4%) Query: 217 NNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRL-HSRAPLCERLSPVLN-- 273 EL+ + LEQ+V+++T L N LS RR + R ++ Sbjct: 157 QQAETELSSARDALEQQVEQRTRQLAESNTRLSAQIDERRRAEANLQASEARFRTIVETS 216 Query: 274 --GLQNLTLLRDIELRVYDTDDEE-----NHQEFTCQPDMTCDDKGCQLCPRGVLPVGD- 325 L ++ + L V + E + T D D + G Sbjct: 217 PIPLCITSMPEGVILYVNEPLRELFGLDTGMRTLTNIVDFYIDPADRDRLVSHLRAEGSF 276 Query: 326 RGTTLKWRLADSHTQYGILLATLPQGRHLSH-----DQQQLVDTLVEQLTATLALDRHQE 380 + + R D + I A + + ++L + R Sbjct: 277 NNSEVHMRRVDGSPFWAIATARVATFGDAPAIYVGLSDITSRKRIEQELFESRNQLRELS 336 Query: 381 RQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNA 440 + I EER IA E+HD + Q L+ +KM VS L+M+ P++ R+ +R + Sbjct: 337 AYMEAIREEERKRIAMEIHDELGQLLTALKMDVSLLKMRLGKDPDAMRKA-DDMRELVEK 395 Query: 441 SWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLL 500 + + + R G+ ALE E++ + G P +L ++P A + Sbjct: 396 TIWMVCNVANHLRPVALNFGVVSALEWLVEDFIRRHGIPCQLHINGGEPVLPEACATAVF 455 Query: 501 QIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN-HYGMIIMRDR 559 +I + +L+N +H+ A+ VT+ + L V D+GCG R+ YG++ M++R Sbjct: 456 RIVQASLTNVGRHAHATRADVTLTSTAAALDLHVSDDGCGFDPGMARTGYSYGLLGMQER 515 Query: 560 AQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDT 596 A+ + G + + GT + + + + Sbjct: 516 ARLIGGAMTIDSAQGMGTAISIHIPLTGGAENDRRPD 552 >UniRef50_B9XSI9 Multi-sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XSI9_9BACT Length = 656 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 78/418 (18%), Positives = 164/418 (39%), Gaps = 28/418 (6%) Query: 182 WRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGL 241 L +A+ ++ + +R RN+ L + + ++ +E+ + Sbjct: 253 LEHLQIVANNIATSIYNERLYKKVRNQKDELAEQITE-----RKRTEEALRQSEERFRII 307 Query: 242 EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ-EF 300 ++ + ++ Q R ++ E ++G+ +L+ + D+ + EN + Sbjct: 308 SEQSLMGIYIIQGERFKYANPKFAEMFGYDVSGMLSLSSVFDVIVEKERPIVSENVRLRL 367 Query: 301 TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ 360 Q + Q G+L + G ++ + + A R + + Sbjct: 368 EGQIEGIRYRFHGQRKDAGLLTIEAHG----FKAELNGEPVILGTAQDVTEREMDEAE-- 421 Query: 361 LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG 420 L T + R+ + ER IARELHD I Q L+ +K+ + +Q Sbjct: 422 --------LKRTTEQLQTLSRRLLELQESERRHIARELHDEIGQGLTALKINLQAVQRMA 473 Query: 421 DALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFP 479 ++ S LL I ++ + Q+R L R L + GL AL ++ + + G Sbjct: 474 NST-AFSPRLLDSI-GIVDKTLRQVRNLSLDLRPSMLDDLGLFAALRWYADQQAQRAGLR 531 Query: 480 VKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGC 539 ++ + ++A+EAL+N ++H++A V + + + ++LT++D+G Sbjct: 532 IQFAAEPMEMRQDPALETACFRVAQEALTNIVRHAEAQNVTIDLNVAEKDLQLTIRDDGI 591 Query: 540 GVPENAIR-----SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDV 592 G +R + G++ M +RA + G + GTEV F K+ + Sbjct: 592 GFDMKKVREHVAAGSSLGLLGMEERASLMGGRVEFKSTPGEGTEVYAWFPISKSLSTP 649 >UniRef50_A6SXZ6 Two-component sensor histidine kinase n=2 Tax=Oxalobacteraceae RepID=A6SXZ6_JANMA Length = 490 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 112/269 (41%), Gaps = 7/269 (2%) Query: 332 WRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQL------ 385 W ++ L AT S + ++ + + R + + +L Sbjct: 214 WVEEWKDIKWINLRATPRALEDGSVQWEGIMTNITASKLEQEEIIRSRAQLAELSEHVNT 273 Query: 386 IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQL 445 + +ER IARE+HD + +L+ +KM ++ L + E + + + ++ + + Sbjct: 274 VKEKERTRIAREIHDDLGGNLTAIKMALALLTRRLPGKSSELLEKAAYVESLVDRTIETV 333 Query: 446 RELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 + R + + GL A++ +E+ + G P + + QA L +I +E Sbjct: 334 HRIAGDLRPGILDFGLVAAIDWQSKEFEKQLGIPCEFVSNQAEIDLDLDQATALFRIFQE 393 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP-ENAIRSNHYGMIIMRDRAQSLR 564 AL+N KH+QAS V V + V+L + DNG G+ + + +G+ M +R+ ++ Sbjct: 394 ALTNIAKHAQASLVSVQLMHTPQYVRLEIIDNGRGIELADRAKPKSFGIRGMVERSVAMG 453 Query: 565 GDCRVRRRESGGTEVVVTFIPEKTFTDVQ 593 G V GGT V + T Sbjct: 454 GSLSVSTAPKGGTVVAINLPLPTTPVSGN 482 >UniRef50_A9B046 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B046_HERA2 Length = 546 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 78/371 (21%), Positives = 147/371 (39%), Gaps = 20/371 (5%) Query: 220 SAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLT 279 S ++ + E + T + NQ++ L+ +R L + L V+ ++ Sbjct: 187 SDDIDQLTWKYENYLVIATPVRDQANQVIGALYVRSRPLSQNQVIVALLMFVIFIASSIV 246 Query: 280 LLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHT 339 + L M + R ++ + +L Sbjct: 247 SIIANALI-----------------GMVYGWFVARNFVRRLVHLTQATDSLAAGDLSVRV 289 Query: 340 QYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELH 399 G + R QQL + E+ QL ++EER +AR+LH Sbjct: 290 NDGSIDEIGHLARRFDSMAQQLESNVKMLRQLADRNAALVEQAGQLAIVEERNRLARDLH 349 Query: 400 DSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTE 458 DS++Q L + M + + A P+ +R + Q+ + + R L+ R L + Sbjct: 350 DSVSQELFSVTMLAAAARNLLPAQPDKARSQVEQLSQMAQRALHETRGLIFALRPAALGD 409 Query: 459 PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASE 518 GL PAL EE + + G ++L+ R +P L +I +EAL+N KHS + Sbjct: 410 QGLVPALRQLTEEAARRQGLQIELNTNGE-RRIPLDHEQALYRICQEALANVTKHSGVNS 468 Query: 519 VVVTVAQNDNQVKLTVQDNGCGVPENAIRSNH-YGMIIMRDRAQSLRGDCRVRRRESGGT 577 V++ ++ L V+D G G ++ R++H G+I +++RA+++ G + GT Sbjct: 469 ASVSLEYEAHRTTLEVRDRGRGFDQDKPRNSHSLGLISIQERAKAVGGTVELTAAPGQGT 528 Query: 578 EVVVTFIPEKT 588 + + +T Sbjct: 529 SLRIVVPRTQT 539 Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 32/250 (12%), Positives = 74/250 (29%), Gaps = 17/250 (6%) Query: 151 TVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMA 210 + V + AL+ + ++ ++ L +++ D + R N +E+ Sbjct: 239 IFIASSIVSIIANALIGMVYGWFVARNFVRRLVHLTQATDSLAAGDLSVRVNDGSIDEIG 298 Query: 211 MLGTALNNMSAELAESYAVLEQ---------RVQEKTAGLEHKNQILSFLWQ-ANRRLHS 260 L ++M+ +L + +L Q + A +E +N++ L ++ L S Sbjct: 299 HLARRFDSMAQQLESNVKMLRQLADRNAALVEQAGQLAIVEERNRLARDLHDSVSQELFS 358 Query: 261 RAPLCERLSPVL--NGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPR 318 L +L + + + + E F +P D + Sbjct: 359 VTMLAAAARNLLPAQPDKARSQVEQLSQMAQRALHETRGLIFALRPAALGDQGLVPALRQ 418 Query: 319 GVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRH 378 R L G L + L Q+ + + + A Sbjct: 419 LTEEAARRQG-----LQIELNTNGERRIPLDHEQALYRICQEALANVTKHSGVNSASVSL 473 Query: 379 QERQQQLIVM 388 + + + Sbjct: 474 EYEAHRTTLE 483 >UniRef50_B2VGC1 HrpX protein (Hrp cluster) n=6 Tax=Enterobacteriaceae RepID=B2VGC1_ERWT9 Length = 494 Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats. Identities = 80/374 (21%), Positives = 151/374 (40%), Gaps = 16/374 (4%) Query: 222 ELAESYAVLEQRVQEKTAGLEHKN----QILSFLWQANRRLHSRAPLCERLSPVLNGLQN 277 +Y++ R + LE + Q L + + + R Sbjct: 114 YEEGNYSMCVVRDMRERKHLEQMSYAREQEFQVLVENSPDMVVRFDPNLNCQYANPAALR 173 Query: 278 LTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLK------ 331 + +LR + + + V T + Sbjct: 174 HLNVSAEQLRGRRFRELLGDLACVQHIERLVSEVVQSQLEAEGELVESDNKTSEGTIVNH 233 Query: 332 WRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEER 391 R + G+L++ + GR ++ + ++L + R RQ+++ EER Sbjct: 234 IRCVPEFDRNGVLISVMCVGRDITA-----IHYAEKKLEDSHMRLRLLARQREVSREEER 288 Query: 392 ATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTT 451 IARE+HD + Q L+ ++M +S L++Q E + + + + +R + T Sbjct: 289 KRIAREIHDELGQHLTSLRMGISMLRIQFSKDNPLLHERVVHLMGLTDKTIQVVRNVATR 348 Query: 452 FRLQLTEPGLRPALEASCEEY-SAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNA 510 R + + GL PALE +E+ S G +L + QA ++A+E+L+N Sbjct: 349 LRPNVLDMGLTPALEWLRDEFISRHIGCCCRLITPEKEVRLGDEQATAAFRVAQESLTNI 408 Query: 511 LKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVR 570 +H+QASEV++ + ++ V LTV+DNG G + N +G++ MR+R + L G + Sbjct: 409 SRHAQASEVIILLVRHAGSVVLTVRDNGRGFDCQNGKDNAFGLMSMRERGRMLGGRVDIE 468 Query: 571 RRESGGTEVVVTFI 584 + S GT + +T Sbjct: 469 SKPSIGTCISLTIP 482 >UniRef50_D1C6S2 Histidine kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S2_SPHTD Length = 456 Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 130/272 (47%), Gaps = 6/272 (2%) Query: 327 GTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLI 386 ++ L ++G L T +G S Q+L+ + + L + R ++ + Sbjct: 178 AGEMRVPLQARGHRHGTLRLTRSRGE-FSRADQRLLRAIGDTLGMAIENARLHQQVHEAA 236 Query: 387 VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRE-LLSQIRNELNASWAQL 445 V+EER IARE+HD +AQ L+ + +++ + A + + +R +++ + Sbjct: 237 VVEERGRIAREMHDGVAQMLAYVLVKLGTVDGLLAAGAADTARAEIETMRQAAESAYTDV 296 Query: 446 RELLTTFRLQLTE-PGLRPALEASCEEYSAKFGFPVKLDYQ-LPPRLVPSHQAIHLLQIA 503 RE + RL PGL L ++++ + V L+ LPP +P + +++IA Sbjct: 297 REQILGLRLVTDGAPGLAAWLRTYLDDFAEQTDLDVTLEIDDLPPGALPRASELQVIRIA 356 Query: 504 REALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI--RSNHYGMIIMRDRAQ 561 +EALSN KH+ A V V + + LTV D+G G ++ + +H+G++ MR+RA+ Sbjct: 357 QEALSNVRKHADARSVRVRCTVEEGDLILTVADDGRGFDPSSANRQGHHFGLLTMRERAE 416 Query: 562 SLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQ 593 SL G ++ + GT + + T + Sbjct: 417 SLGGTLQIESQPGSGTRITLRAPLPTTGVSHR 448 >UniRef50_A7BTT3 Sensory transduction histidine kinase n=1 Tax=Beggiatoa sp. PS RepID=A7BTT3_9GAMM Length = 732 Score = 241 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 89/546 (16%), Positives = 196/546 (35%), Gaps = 23/546 (4%) Query: 59 RLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQ 118 R + + D + + + T S + R + + + + ++ + Sbjct: 179 RGTLIMGRNLDDAQIERLTQLTHLSVTVQRLDNPNLPPDFAKAYLALSNQQQVVQILDGK 238 Query: 119 NRETVSADVSQFVAGLDQL-VSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRAR 177 + + L V+ + + + ++ + ++ +F + + + Sbjct: 239 HIAGYILTKDIYQQPAALLRVAMPRKIYQQGLTSLYALSGLVLIFAVVCVSVILWLFERL 298 Query: 178 LLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEK 237 +L L ++ D + G +E+A L TA+NNM L S ++V+ Sbjct: 299 VLARLATLSHEVMQINVTDNLSIVMVEGGDELAHLATAINNMLKALHAS----NEQVRHS 354 Query: 238 TAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENH 297 A L + ++ L + + C + GL++ ++ EL + ++ H Sbjct: 355 EASLAEAQR-IAHLGNWEWDIINNRLNCSDEIYRIFGLKSQSITPTAELFLNYVHPDDQH 413 Query: 298 QEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHD 357 + + +D+ C L R V G+ + + G ++ + + +S Sbjct: 414 KVSLALQKIANEDQPCNLEHRIVQQNGEI-HFIHTQGEIIKDNTGKIVRIIGTLQDISEL 472 Query: 358 QQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ 417 +Q +TL L +R + I EE +A ELHD Q ++ ++ + Sbjct: 473 KQAQAETL-----RLLEENRFLIHRSMAIKEEELKRLAYELHDEFGQCITAIQADAETIV 527 Query: 418 MQGDALPES------SRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCE 470 + + I + ++ + L+ R L E GL AL Sbjct: 528 DLAARKQQQPIILNKINLSANAILEVSSHAYDVVHSLMQQLRPSGLDELGLVEALRDLVS 587 Query: 471 EYSAKFG-FPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND-- 527 + A+ + I + ++ +E L+N K++QAS V + + + Sbjct: 588 TWQARHKKTRCIFRATGELHHLGETINIQVYRVVQECLTNIAKYAQASHVSIKLTVDSVK 647 Query: 528 NQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEK 587 + L VQDNG G+ + G+I MR+RA +L G+ ++ G ++ + + Sbjct: 648 KILILCVQDNGQGMNLTQYKR-GLGLIGMRERATALEGNLQLESALGDGVQITLIIPIAE 706 Query: 588 TFTDVQ 593 + Sbjct: 707 SHLQKH 712 >UniRef50_B8HT67 GAF sensor signal transduction histidine kinase n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HT67_CYAP4 Length = 652 Score = 241 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 4/297 (1%) Query: 290 DTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLP 349 D ++ T P + L L + G L LP Sbjct: 352 DYPPYFLIEDITTDPHIGQVSAQIDTDVGAWFSQRGVTRLLNIPLWLNEKTIGALDIWLP 411 Query: 350 QGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCM 409 R + Q L T +Q+T L++ QQ I++EER IA ++HD++AQ+ + + Sbjct: 412 SHRCFNRSQIDLAYTFGQQITLASYLNQMFTEVQQTILLEERNRIASDIHDTLAQAFTGI 471 Query: 410 KMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTE-PGLRPALEAS 468 +Q+ + P++ ++L I A+ R + TE L L S Sbjct: 472 SLQLEVAKPLIQQEPQTVEQILQHISQLAKNGLAEARRSVWALYPPGTEYANLAHMLYDS 531 Query: 469 CEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDN 528 E+ S ++++ P + + ++LL+I +EAL+NALKHSQA V + + + Sbjct: 532 VEQMSRNTPISIEVNLLGQPCPIAPYIGMNLLRIGQEALTNALKHSQAQAVWIELTYTPD 591 Query: 529 QVKLTVQDNGCGVPENA---IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVT 582 V L+++DNG G + +G++ M +R + + + GT+++V Sbjct: 592 LVLLSIRDNGRGFTPPTNLDNLNGGFGLVGMYERCDRIGAQISILSQPGQGTQILVE 648 Score = 55.7 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 1/86 (1%) Query: 312 GCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTA 371 Q ++P+G + L + G L +P+ + +Q +L L Q+T Sbjct: 172 DLQWVICALVPLG-LPKEINVPLFLGDSTIGALTIHVPREHQFTAEQVELAQALAHQVTL 230 Query: 372 TLALDRHQERQQQLIVMEERATIARE 397 + R + +Q + E+ A+E Sbjct: 231 AAEMQRLAQESKQAAIAREQERAAQE 256 >UniRef50_Q7N5B4 Similar to nitrate/nitrite sensor protein NarX n=2 Tax=Photorhabdus RepID=Q7N5B4_PHOLL Length = 410 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 112/357 (31%), Positives = 189/357 (52%), Gaps = 18/357 (5%) Query: 227 YAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIEL 286 R + + L+ KN L FL Q++ +L + L E+L + + L L + ++ Sbjct: 69 KEWQHARYKAEINALKQKNSYLDFLCQSHFKLQNCKLLPEKLQEIFSHLNRLIPFCEAKI 128 Query: 287 RVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLA 346 Y + E + CP +P+ ++W L D+ YG L Sbjct: 129 IFYPSQQEYFFR-------------NPHQCPYFDMPL-----IMRWNLDDNIDSYGTLWI 170 Query: 347 TLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSL 406 + L+ D++ LV +V +T L + + Q Q ++ ER I+RELHDSIAQSL Sbjct: 171 KTHRNSDLTPDEKSLVQDVVTLMTNKLLRENQIQCQHQSMLAAERTAISRELHDSIAQSL 230 Query: 407 SCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALE 466 S +K+QV+CL + D LP+ S L+ I++ELN ++ QLRELL TFR + + L+ +L+ Sbjct: 231 SFLKIQVNCLYIGSDNLPKQSLTSLNMIKDELNIAYRQLRELLATFRNEQPQCNLQESLQ 290 Query: 467 ASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN 526 E++ + GF ++ +Y+L + +P + HL+QI RE L+N KH+ A+ + + + Sbjct: 291 TLISEFNHRLGFNIEFNYRLTHQHIPDSYSKHLIQIIRECLNNCYKHANANWISIRIYPI 350 Query: 527 DNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 D+++ V DNG G+ ++ N +G+ IM+DR L G +++ R+ GGTEV + F Sbjct: 351 DDKIITVVSDNGQGINLDSANKNKFGLAIMQDRVSILGGQLQIKNRKHGGTEVEIQF 407 >UniRef50_Q1IWU8 Multi-sensor signal transduction histidine kinase n=3 Tax=Deinococcus RepID=Q1IWU8_DEIGD Length = 574 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 73/367 (19%), Positives = 133/367 (36%), Gaps = 23/367 (6%) Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLL---------RDIELRVY 289 + L L+ ++ + + + L+ V + +D LR+ Sbjct: 208 EAARQRTLDLMTLYSVDQSIRAERNMRRLLARVTRNMAERVRAGARAAYLRDQDGLLRLE 267 Query: 290 DTDDEENHQEFTCQPDMTCDDKGCQLCP------RGVLPVGDRGTTLKWRLADSHTQYGI 343 + P + + L + + D G+ Sbjct: 268 YAQHAGGESSSGALAPAFVERVAEAGMPLVASQQEAAEVFPEARSALGFPMRDDEGLVGV 327 Query: 344 LLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIA 403 L+ + + L+ L Q T + R ++L + +ERA IARE+HD +A Sbjct: 328 LVLGDARPEAFDGVRLPLLALLAGQATLAVRNARAYLYSEELAISDERARIAREIHDGVA 387 Query: 404 QSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLR 462 QSL+ +++ + Q + PE + + L ++R + R L GL Sbjct: 388 QSLAFCALKLDLVARQLHSDPEKAEAEVKAATGLLREQIREVRRSIFALRPIDLERYGLL 447 Query: 463 PALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT 522 + E++ + L+ + + +I +E+L+N KH++A EVVVT Sbjct: 448 ETVRRYVEDFGQQNNLRTVLNVTGD-IHLAPGDEAVVFRILQESLNNVAKHARAREVVVT 506 Query: 523 VAQNDNQVKLTVQDNGCGVPENAIRS-----NHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 + +V L VQD+G G I G++ MR+R +S G+ RV GT Sbjct: 507 LH-GGERVTLRVQDDGQGFDPEQISGRVSSAGGLGLMQMRERVESRGGNYRVLSSPGHGT 565 Query: 578 EVVVTFI 584 V Sbjct: 566 LVEAEVP 572 >UniRef50_B8CZJ7 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ7_HALOH Length = 352 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 109/219 (49%), Gaps = 4/219 (1%) Query: 369 LTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA-LPESS 427 L ++ ++L ++EER IARELHDS++Q+L + + ++ L++ D + Sbjct: 133 LEQQQEKLELEKENKKLAIIEERNRIARELHDSVSQNLFGINLNLNTLEVLIDEGDHDRV 192 Query: 428 RELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQL 486 R+ + ++ + ++R ++ + L E ALE+ E Y ++ + Sbjct: 193 RKTVEDLKKMVQEVQTEMRLMIYELKPVHLREKDFFEALESLVELYRNRYNLKITTHLNG 252 Query: 487 PPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI 546 V S + L ++A+EAL+N +KH+ A +V +T+ +N + + ++DNG G + Sbjct: 253 NENRVESEVQLALYRVAQEALNNIVKHADADKVSITLGIGNNGITMAIKDNGKGFNVGRV 312 Query: 547 RSNH--YGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 ++ +G+ M+DR + GD + + GT V V+ Sbjct: 313 KAGSGRFGISGMKDRVNDVGGDFDIESQPGQGTTVKVSI 351 >UniRef50_Q3SG40 GAF Sensor Signal Transduction Histidine Kinase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SG40_THIDA Length = 415 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 84/383 (21%), Positives = 150/383 (39%), Gaps = 34/383 (8%) Query: 247 ILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDM 306 L L + L + A + + L L+ + L + +RV D + Sbjct: 33 ALRVLSEITTSLSTDANVEQLLGRFLSTMIRLAGAQGGAVRVITDDRTHLRLIASVGLPP 92 Query: 307 TCDDKG---------------------------CQLCPRGVLPVGDRGTTLKWRLADSHT 339 + C+ G T + L + Sbjct: 93 DLVEHEHLVSVDCGVCGKAAREVSVSSWNNVAYCKRQANDPYFSGTCSTVVAVPLMHKNQ 152 Query: 340 QYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELH 399 G+ L +G + D + L ++ E L L R ++ +M ER +A ++H Sbjct: 153 VMGVYNLFLEEGHVVPEDVRLLFRSISEHLGIALENARLTRENMRISLMNERQMLANQIH 212 Query: 400 DSIAQSLSCMKMQVSCLQMQGDALP-ESSRELLSQIRNELNASWAQLRELLTTFRLQLTE 458 DS+AQ+L+ KM+++ L + L + ++ ++A LR+L+T +R ++ Sbjct: 213 DSLAQTLAYAKMRLTVLSDAMRHEDYAKANRFLGDVEEAVDLAYADLRDLITQYRDRINP 272 Query: 459 PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASE 518 GL PA++ + + K V + + + I + I +E+L N KH++A Sbjct: 273 RGLVPAIQELAKGFRKKANADVDFLNLVQDVTLTPDEEIQVFHIIQESLYNIAKHARARH 332 Query: 519 VVVTVAQNDNQVKLTVQDNGCGV----PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRES 574 VV+T + Q + V D+G GV E++ +G+ IMR+RA L G V R + Sbjct: 333 VVITFDLENGQYIVNVADDGVGVQKKHDESSTLGKSFGLTIMRERAARLNGKLVVESRPA 392 Query: 575 GGTEVVVTFIPEKTFTDVQGDTH 597 GGT V + F + Q H Sbjct: 393 GGTVVRLVFP--QRAASHQNSEH 413 >UniRef50_UPI0001746019 hypothetical protein VspiD_01665 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746019 Length = 872 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 115/258 (44%), Gaps = 3/258 (1%) Query: 328 TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIV 387 +TL + + G L + H ++ +L L Q+ L L R + +L V Sbjct: 605 STLVVPMLLAGRVTGFLSIRFTRPPHFQTEEIELAQALAHQVILALQLIRLTQEGHRLAV 664 Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDAL-PESSRELLSQIRNELNASWAQLR 446 + ER +ARELHD++AQ ++ + MQ+ + E+ + + R+ + + R Sbjct: 665 LAERNRMARELHDTLAQGITAVIMQLELAEDASARGLVEAVDPHVKRARDLARQTLREAR 724 Query: 447 ELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIARE 505 + R L L AL A ++ + G ++ + P +P+ ++L+I +E Sbjct: 725 RSVRAMRPQALKAQDLPQALGALFKQMTEGSGMQAEVILRGIPCHIPTRCEENILRIGQE 784 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRG 565 L+NAL+H+ AS + + L + DNG G + + +G+ +R+R + + G Sbjct: 785 VLTNALRHAGASRFTGRLIFAPTAILLHLHDNGRGFDPQG-QHDGFGLTGIRERVEGMGG 843 Query: 566 DCRVRRRESGGTEVVVTF 583 +R R GT + + Sbjct: 844 RLCLRSRPGQGTSIRIRL 861 >UniRef50_Q5SJ33 Sensor histidine kinase n=3 Tax=Thermus RepID=Q5SJ33_THET8 Length = 515 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 78/365 (21%), Positives = 148/365 (40%), Gaps = 10/365 (2%) Query: 224 AESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRD 283 VL V + +++ L L++ ++ L + A L L +L+ ++ Sbjct: 156 QVFLEVLAHEVAGALQAVVARSRDLLTLFEVDQALKAEANLDRLLEGLLDRIRAWAGAEG 215 Query: 284 IELRVYDTDDEENHQEFT-CQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYG 342 + + D + + PV L L G Sbjct: 216 GGVLLLDEEGFLLARVVQGLALPSHPFLPEGAWKAALQGPVFVEKGVLALPLKAREP-VG 274 Query: 343 ILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSI 402 +L+ +G LS + + L Q+ + + + ++L + EER IARE+HD + Sbjct: 275 VLVL---KGEDLS-RRIPFLSFLASQVALAVRNAQAYLKAEELAINEERTRIAREIHDGL 330 Query: 403 AQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGL 461 AQSL+ M +++ ++ + E++ L+++R L A ++R + R L G Sbjct: 331 AQSLAFMALKLDLVERLWEKDKEAALGALAEVRETLRAQIREVRRSIFALRPIDLERYGF 390 Query: 462 RPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVV 521 +L + ++ + GF V+L + + L ++ +EAL+NA KH++ + V V Sbjct: 391 LESLRRYAQAFAEQAGFRVQLSLP-ERVGLSQASELVLFRVLQEALTNAAKHARPTRVEV 449 Query: 522 TVA-QNDNQVKLTVQDNGCGVP-ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 + + +L V+DNG G A +G+ MR+R ++ G V GTEV Sbjct: 450 VLEPLGERGARLVVRDNGRGFAVPEAQGLGGFGLTQMRERVEARGGRFWVVSAPGRGTEV 509 Query: 580 VVTFI 584 Sbjct: 510 GAEVP 514 >UniRef50_B6JD37 Signal transduction histidine kinase containing PAS/PAC sensor domain n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD37_OLICO Length = 358 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 2/239 (0%) Query: 357 DQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL 416 ++L A+ R Q + EERA IARELHD + Q+L+ MKM + L Sbjct: 117 RDISERKAAEDELVASRTQLRALSHYLQTVREEERAHIARELHDELGQTLTAMKMDLVWL 176 Query: 417 QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAK 475 + + A + + + ++ + S L+ + + R L E GL A+ + + + Sbjct: 177 RERLSADNGALKPRVERLVGLADRSVTDLQRIASDLRPLMLDELGLVSAVHWLTDTVAGQ 236 Query: 476 FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQ 535 + L + + +I +EAL+N ++HS A V +T ++++ + + Sbjct: 237 SNLNINLSFDREDLTYGPEVSTAAFRIVQEALTNIVRHSGARHVTITACHAEDELHIEIV 296 Query: 536 DNGCGVPENAIRSN-HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQ 593 D+GCG+P A H+G++ M +RA L G V GGT V + ++ + Sbjct: 297 DDGCGLPPTAASPRLHHGLLGMHERANMLGGSVAVESAPGGGTRVRASLPLKQRPAAQE 355 >UniRef50_C6BTX2 GAF sensor signal transduction histidine kinase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX2_DESAD Length = 689 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 128/340 (37%), Gaps = 8/340 (2%) Query: 248 LSFLWQANRRLHSRAPLCERL--SPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPD 305 LS + R + + L L+ + + + Y + F Sbjct: 343 LSLIADEARTIVNGMGSVLMLLEGDSLHCVCG-SGAPRCPMEFYPVESTYYGSAFQTGET 401 Query: 306 MTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTL 365 + D ++ + T + L + + G+L+ + G H +++++ Sbjct: 402 IIVRDAQSEIPEAE--RSEELRTLIVVPLLEGDKKLGLLMVSNKSG-GFDHADKRIMEMF 458 Query: 366 VEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPE 425 Q L R E+ ++L+V ER +ARELHDS+ Q+L + ++ Sbjct: 459 AAQAVLALRNSRMFEQSEKLVVQGERQRLARELHDSVTQALYAITFCSDAAVRSFESGKS 518 Query: 426 SSR-ELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLD 483 + E L ++ +R L+ L GL A++A + G L Sbjct: 519 GAAIEQLKALQGMAQQGMRDMRSLIFDLHPPELESEGLVGAIQARLNSVEIRSGLGADLF 578 Query: 484 YQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPE 543 + R +P L +IA EAL+N+ KHS+A V V V + + + + D+G G Sbjct: 579 VEGDERRLPLRVEEELFRIAIEALNNSTKHSKAESVTVKVDFAEGKTVVQIIDDGQGFDI 638 Query: 544 NAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + + G+ +R+R + + + GT + V Sbjct: 639 ATLPTGGMGLRGIRERVERINAHLDINSESGKGTVLTVKV 678 >UniRef50_Q45827 Uncharacterized sensor-like histidine kinase Caur_0899 n=4 Tax=Chloroflexaceae RepID=Y899_CHLAA Length = 597 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 90/483 (18%), Positives = 181/483 (37%), Gaps = 52/483 (10%) Query: 144 TTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQP--WRQLLAMASAVSHRDFTQRA 201 +R V + + +A + F RL+ P LL + Sbjct: 126 YAAIRQSRSVSLLSGLLAAVAYMAAFIAW---RRLIAPEALMTLLDYVALALRGTTLAIV 182 Query: 202 NISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSR 261 N +A + N + ++ EQ + E A + L++ L S Sbjct: 183 PWVTGN-LAERQSEFNR--ERVTQAQRDAEQALSEARAY----RDQMRSLYRVALTLGST 235 Query: 262 APLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF----------------TCQPD 305 A + L +L Q + R + + E + F T Sbjct: 236 ANYRQVLDTLLQESQKIVPYRAGIVLLSSGQPNELYVAFGSNLAPGDLNRSLKMDTGLAA 295 Query: 306 MTCDDKGCQLCPRGVLPVGDRGTTLK-------WRLADSHTQYGILLATLPQGRHLSHDQ 358 + + P + +L+ L YG+ + Q L+ DQ Sbjct: 296 ALRANTAQVITSFTQFPSLQQLGSLRTCKAAALLPLQAGMRVYGLFVVATDQT--LTTDQ 353 Query: 359 QQLVDTLVEQLTATLALDRH-----QERQQQLIVMEE-RATIARELHDSIAQSLSCMKMQ 412 +++ L L + +ER++ L EE R +AR+LHD AQ+++ + M+ Sbjct: 354 VEMLMALANYAIVALHNAQLIYDLKEEREKLLSHEEEVRHQLARDLHDGPAQAMAVITMK 413 Query: 413 VSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEE 471 ++ + P + L ++ + + ++R +L R L GL+ LE + Sbjct: 414 AEFIKRLLERDPAQALAELDELSSIAKRTNYEVRTMLFELRPLMLETQGLKVTLEQYLDR 473 Query: 472 YSAKFG-FPVKLD-YQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ-NDN 528 AK G + L+ + + S L + +E+++NA+KH++A+ + V + + ND Sbjct: 474 LRAKAGNTAIVLEGTDIDKVRLGSKVEGALFNMIQESVTNAIKHAKANHIWVRLRRLNDQ 533 Query: 529 QVKLTVQDNGCGVPENAI-----RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 +++ +QD+G G + A+ R +G++ + +RA+ + G + GT++ + Sbjct: 534 MLEVVIQDDGVGFDKAAVLKSYERRGSFGLLNIDERARLVGGRAEIDSTPGKGTQITIFV 593 Query: 584 IPE 586 E Sbjct: 594 PIE 596 >UniRef50_Q47G83 PAS n=1 Tax=Dechloromonas aromatica RCB RepID=Q47G83_DECAR Length = 683 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 136/363 (37%), Gaps = 12/363 (3%) Query: 233 RVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTD 292 R + + N+ L + Q+ R + + + + L +R ++ Sbjct: 323 RKEHLQLERDASNEKLRHMVQSVRDAILTVDSSQNIVLFNSAAEQLWGIRAADVL----- 377 Query: 293 DEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGR 352 D+ Q D L + L+ Sbjct: 378 DQNIEQFLLRSQPKIVASNLLGYLREAWQSPSDLALLGIVSLVRDDQDIPVELSLSSTTV 437 Query: 353 HLSHDQQQLVDTLVEQLTATLALDRHQERQQQL------IVMEERATIARELHDSIAQSL 406 + L E+ L L + + Q+L + +ER I+RELHD + Q+L Sbjct: 438 RGERLVTAIFRDLSERQRTELELLKSNRQLQELTASLESVREQERLRISRELHDELGQAL 497 Query: 407 SCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPAL 465 + ++M++S L + + + I+ ++ + +R + + R L + G A Sbjct: 498 TGLRMEISWLGGRLLTTQPELEQKVVSIKKLIDGTIKSVRRISSELRPLVLDDLGFAAAA 557 Query: 466 EASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ 525 ++++ + V L+ A L ++ +E+L+N +H+ A V + + Q Sbjct: 558 NWYVDQFATRTNLKVTLELPNDDPENGGTVATTLFRVLQESLTNVARHAGARNVDIRLLQ 617 Query: 526 NDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 ++Q +L ++D+G G +++ + G+I MR+R Q+L G + GT + + Sbjct: 618 ANDQWRLEIRDDGQGFDQSSAKMGGIGLIGMRERVQALGGSFELTAAPGQGTLIEICIPV 677 Query: 586 EKT 588 E Sbjct: 678 ESA 680 >UniRef50_A6SWF1 Sensory box histidine kinase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SWF1_JANMA Length = 626 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 71/356 (19%), Positives = 136/356 (38%), Gaps = 9/356 (2%) Query: 238 TAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELR---VYDTDDE 294 T + + Q L ++ + + A + + LR V D Sbjct: 268 TVDITAQRQAEDSLRKSEQEFRTLAENSPDGVIRYDRDCKRIYVNPAHLRNMGVEYDDAV 327 Query: 295 ENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHL 354 + DMT D+ L + R + + + Sbjct: 328 NVTLDSYWGADMTVDEYRAILRSVMTTGQPAEVSGRWTRPDGGIVFFAVHAVAEFDSKGE 387 Query: 355 SHDQQQLVDTLVEQLTATLALDRHQERQQQLI------VMEERATIARELHDSIAQSLSC 408 + + + + A L + Q+ +QL + +ER IARELHD +AQ LS Sbjct: 388 AESVLAISRNITSIIEAENQLRQSQKLLRQLADRSETSIEDERKHIARELHDDLAQHLSA 447 Query: 409 MKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEAS 468 ++M VS ++++ L + + L+A+ R ++T R + G+ ALE Sbjct: 448 LRMNVSVMKLEFGHLSSAFSGQAETMIERLDATIKIARNVITALRPTALDMGIVQALEWL 507 Query: 469 CEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDN 528 +++S +L ++ A + +IA+E+L N +H++A V V ++ D Sbjct: 508 VKDFSTHKEISCRLHIHDENLILSDRSATAIFRIAQESLRNISRHAEACNVDVNLSHKDG 567 Query: 529 QVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 L ++D+G G + N +G++ +++R L G + E GT + V Sbjct: 568 MCLLAIRDDGRGFNTTNVPFNSFGLMGIKERVLILGGKVEIESEEGQGTTIRVNIP 623 >UniRef50_C1XJE4 Histidine kinase n=2 Tax=Meiothermus RepID=C1XJE4_MEIRU Length = 529 Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 79/371 (21%), Positives = 145/371 (39%), Gaps = 9/371 (2%) Query: 219 MSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNL 278 +S E VL V +++ L L++ ++ L + A L L +++ + Sbjct: 162 LSNEERAFLEVLAAEVAGALESARARSRDLLTLYEVDQALRAEANLGRLLERLMDRILAW 221 Query: 279 TLLRDIELRVYDTDDEENHQEF-TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADS 337 + + D ++ Q + + PV R L L + Sbjct: 222 AGATGGGVLLLDEENFLQPQVLRNLELPPHAFMPDHRWKEALESPVFVRENLLAVPLREQ 281 Query: 338 HTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARE 397 G+LL + + L Q+T + + R ++L + EER IARE Sbjct: 282 SA-IGLLLVQGEAEN--LRQRLPFLRFLAAQVTLAVRNAQAYLRAEELALTEERNRIARE 338 Query: 398 LHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QL 456 +HD IAQ+L+ M +++ + PE + E L Q++ L A ++R + R L Sbjct: 339 IHDGIAQALAFMALKLDLSERLLQTDPERALEELHQVKETLRAQIREVRRSIFALRPIDL 398 Query: 457 TEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQA 516 G ++ ++ + GF V+L + + ++ +EAL+NA KH++ Sbjct: 399 ERYGFLESVRRYATAFAEQAGFRVRLSLP-EKIELSQASELVFFRVLQEALTNAAKHARP 457 Query: 517 SEVVVTVA-QNDNQVKLTVQDNGCGVPENAIRS--NHYGMIIMRDRAQSLRGDCRVRRRE 573 V V + + L + DNG G + +G+ MR+R ++ G V E Sbjct: 458 GLVQVKLTPLGERGGVLEISDNGRGFKAGTSANGLGGFGLTQMRERVEARGGRFEVVSVE 517 Query: 574 SGGTEVVVTFI 584 + GT V Sbjct: 518 NQGTTVRAELP 528 >UniRef50_C4DRB4 Signal transduction histidine kinase, COG4585 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DRB4_9ACTO Length = 422 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 62/303 (20%), Positives = 121/303 (39%), Gaps = 14/303 (4%) Query: 284 IELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGI 343 + + + Q G L G + + G Sbjct: 128 AFVALPGAWAYPGVVLLSLLTVPEAPRGLWQGLTLGDLLFPTVGVAVA-------SFIGA 180 Query: 344 LLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIA 403 ++ T+ + + + L ++ A R E+ +Q V ERA +AR++HD++A Sbjct: 181 MMRTVEREAIRRREVNARLVALADENAAL--QARLVEQARQAGVTAERARLARDMHDTVA 238 Query: 404 QSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQL-TEPGLR 462 Q L+ + Q+ +A P+ + L R+ S ++R + R L + L Sbjct: 239 QGLAGIVTQLETA----EADPDDTARRLRIARDLARDSLVEVRRSVAALRPALLDDADLA 294 Query: 463 PALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT 522 AL + + + P + + +L++A+EALSN +H++AS + VT Sbjct: 295 EALAREVDAWRHRNDIAATFTVTGTPVPLDAAVDEAVLRVAQEALSNTARHAKASRLGVT 354 Query: 523 VAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVT 582 ++ ++ + L ++D+G G +A +G+ MR R + L G + + GT V V+ Sbjct: 355 LSYMEDMLVLDIRDDGEGFAVDAEPRQGFGLTAMRQRVEQLDGSVHIESKPGAGTAVSVS 414 Query: 583 FIP 585 Sbjct: 415 LPL 417 >UniRef50_Q1IIL1 GAF sensor signal transduction histidine kinase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IIL1_ACIBL Length = 552 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 74/518 (14%), Positives = 166/518 (32%), Gaps = 34/518 (6%) Query: 91 ERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVS---QFVAGLDQLVSGFDRTTEM 147 ++ WRN + ++ F + F+ T Sbjct: 18 VSKALQPHFSAIRTNWRNRMFAEFQLDGRAMAALERLTIGTGFRLFCHDNIHTFEENTSY 77 Query: 148 RIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRN 207 + + + + + +V + + LL P+ + + + + Sbjct: 78 YGKRLAKLQ------VDIRVVSQALDIYLELLDPYVHQMFEVERL--GEVIAALDRFSSA 129 Query: 208 EMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCER 267 + A + A + + N++L ++ R L + Sbjct: 130 TYVAVSNAYFDAQKAEAATLLAVLDAELTAPNLSALLNRVLQVTTESFRASLGVILLRDA 189 Query: 268 LSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRG 327 +PVL N+ +IE + + D Sbjct: 190 DAPVLRARANVGFGDEIENLEIEFGHGFSGHIAQTGEPGILPDITESHGRLNPFCRDKAQ 249 Query: 328 TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQL-- 385 L G++L + + +L+ + ++ + E ++ Sbjct: 250 ALWGVPLKAGEKVIGVMLIGFAKPYVWLPTEHELLRAIADRSALAIQRAGMTEALREREA 309 Query: 386 -----------IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQI 434 EER I+RELHD Q+L +++ + L+ +++ + + Sbjct: 310 RIAELSGYLLRAQEEERKRISRELHDETGQALMVIRLYLGMLEATVTTR--TAKTKIHET 367 Query: 435 RNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPS 493 ++ + +R ++ L E GL A+ ++ + G K+ + Sbjct: 368 LEVVDRTIEGIRRIIGRLSPLVLQELGLIAAIRKEAKDLAKSAGVKAKVSVGDNVGRLSP 427 Query: 494 HQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR---SNH 550 + ++ +EAL N KH+ A+ V + + ++ VKL ++D+G G+ ++ Sbjct: 428 VTETAVYRVVQEALHNVAKHAHATTVTIQLRRDGGLVKLCIEDDGVGIKQSQKPNPGRRS 487 Query: 551 YGMIIMRDRAQSLRGDCRVRRR----ESGGTEVVVTFI 584 +G+ MR+R +L G +V E GT + VT Sbjct: 488 FGLAGMRERITTLEGTLKVGPASRNDEGAGTRIEVTVP 525 >UniRef50_Q814L6 Two-component sensor protein yhcY n=40 Tax=Bacillus RepID=Q814L6_BACCR Length = 523 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 67/305 (21%), Positives = 121/305 (39%), Gaps = 8/305 (2%) Query: 282 RDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQY 341 +++ LR +E D+ + + V + + + + Sbjct: 226 KELSLRASYVQEELQEDVKEAAKKALEQDEPVLIKHQIGHNVHLNRAVIATPIHIQNHIF 285 Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 G+L +L G + ++ L ++ + R E++++L+ MEER +AR+LHDS Sbjct: 286 GVLCVSLNNGE-FDANTIDVIQALSNHVSLIIENLRLNEQRRELVRMEERNRLARDLHDS 344 Query: 402 IAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGL 461 ++Q L + + E + L ++R + ++R L+ R E GL Sbjct: 345 VSQKLFSLTFMTKGAEAVLKGKNEKVDQSLHEMRELAQGALKEMRTLIWQLRPAGLEKGL 404 Query: 462 RPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVV 521 PAL+ E G ++ R +P L +I +EAL+N KH+ E + Sbjct: 405 LPALKQYGENL----GLKIREQVTG-VRDLPRVVEEALWRIGQEALNNVSKHAGVKEATI 459 Query: 522 TVAQNDNQVKLTVQDNGCGVPENAIRS-NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVV 580 N+ V L + D G G E I+ GM MR+R + + G ++ T V Sbjct: 460 YFTVNEKNVSLEIVDQGKGFVEKNIKEKKSLGMTTMRERVELVGGTIKIVSSNKR-TSVK 518 Query: 581 VTFIP 585 V Sbjct: 519 VNVPL 523 Score = 55.0 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 52/171 (30%), Gaps = 31/171 (18%) Query: 247 ILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTD-------DEENHQE 299 L L + L++ L VL L ++T L + + D + D + + Sbjct: 9 ELVILKEIAETLNTSNDTYHVLQAVLEKLLSVTGLTTGWIFLADENGKYTKLIDYQLPEA 68 Query: 300 FTCQPDMTCDDKGCQLCPRGVLPVGDRGTTL------------------------KWRLA 335 T + + C V +R + L Sbjct: 69 LTYENKRPMCEGECWCLRGFVDGKLERAVNIIECKRINNAIEYNWGDTEGILHHATVPLK 128 Query: 336 DSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLI 386 ++G+L P H S ++ L+ ++ Q+ L + E +++ Sbjct: 129 AGGEKFGVLNVASPGKTHFSEEELVLLQSVAFQIGTALKRTKLYENEKRRA 179 >UniRef50_D1CAA4 GAF sensor signal transduction histidine kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CAA4_SPHTD Length = 555 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 68/375 (18%), Positives = 133/375 (35%), Gaps = 29/375 (7%) Query: 247 ILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF------ 300 L+ L + + + S L + + + ++ + + + D + + Sbjct: 177 ELAILQRISSVISSSLDLDDVFQAIYDEIRGVMPTDAFIIGLTREDGLLDLEFIADGGQR 236 Query: 301 ------------------TCQPDMTCDDKGCQLCPRGVL--PVGDRGTTLKWRLADSHTQ 340 QP M D + P + + + L + Sbjct: 237 YAPVRAFKYSEVFRRALEERQPVMVGDVLDAEATPMRSVGHTRTKVRSVIAAPLIQGNEV 296 Query: 341 YGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHD 400 G+L A +L+ T+ + R + Q L + EER +ARE+HD Sbjct: 297 IGLLSAQSYVPHRYRECDARLLMTIANHAVVAIENARLYRQAQSLAIAEERNRLAREIHD 356 Query: 401 SIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFR-LQLTEP 459 ++AQ L + + + L ++ R L+ + + + + R + R L Sbjct: 357 TLAQGLIGIILYLERLDLEIPQDDRRFRPLVERALSLARGNLEEARRSVHDLRAAPLEGR 416 Query: 460 GLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEV 519 L AL E+ + F V+L L+ + L ++ +EA+SNA KH+ + Sbjct: 417 TLVEALAHLAEDLRKERLFEVELSVPRALPLLAARVETALFRMVQEAISNARKHAGCKSL 476 Query: 520 VVTVAQNDNQVKLTVQDNGCGVPENAI--RSNHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 + ++ V L V D+G G + ++ +G+ MR+R + G+ V GT Sbjct: 477 AIRLSVAGGMVTLEVHDDGRGFEVERVLGEAHRFGLSTMRERITQVGGEFTVESCPGDGT 536 Query: 578 EVVVTFIPEKTFTDV 592 V T + Sbjct: 537 LVRATIPLSQATHSE 551 Score = 53.4 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 54/176 (30%), Gaps = 26/176 (14%) Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ 298 L + L L + + + S L L+ +++ + L +R+YD + + Sbjct: 2 ERLRRGEERLISLQRVSAAMSSDLDLDRTLTVLVDEARRLMHADTAVIRLYDEETDSLRL 61 Query: 299 EFTC--------------------------QPDMTCDDKGCQLCPRGVLPVGDRGTTLKW 332 +P ++ D + + + G+ L Sbjct: 62 IAEAGDEQGVLLGEVVPLDGSLSGYCFRGSRPVVSSDVQSDPRLGQEIKKATRFGSMLVV 121 Query: 333 RLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVM 388 L G+LL S + Q L+ L +Q + + R ++ Q I Sbjct: 122 PLLVRDRPIGVLLVGSYARGAFSEEDQTLLCLLADQAASAIENSRLYQQAQGQIAE 177 >UniRef50_B5I2X6 Two-component system sensor kinase n=10 Tax=Streptomyces RepID=B5I2X6_9ACTO Length = 381 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 80/378 (21%), Positives = 133/378 (35%), Gaps = 36/378 (9%) Query: 242 EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDE------- 294 + L+ + A + + + L ++ + L + L V D Sbjct: 3 QGPRSGLAAVSSALLAMSRHLEVRDVLKTIVASARELLDAQYAALGVPDDHGGFAQFVVD 62 Query: 295 -------------------ENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLA 335 P+ D + D L + Sbjct: 63 GVSDEQWKAIGPLPRQHGILAAMLHEATPERLADVRKDPRFEGWPSAHPDLVDFLGLPIR 122 Query: 336 DSHTQYGILLATL------PQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVME 389 D G L + + ++L+ L + L R ER ++L + E Sbjct: 123 DGDEVIGALFLANKNCPKPEGSCGFTEEDEELLSILAQHAAIALTNARLYERSRELTIAE 182 Query: 390 ERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELL 449 ER+ +A ELHD+++Q L +++ D P ++ L Q+ + +LR + Sbjct: 183 ERSRLAHELHDAVSQKLFSLRLTAQAAAALVDRDPSRAKGELHQVAVLAAEAADELRAAV 242 Query: 450 TTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS 508 R L E GL L V + R +P+ Q +L++A+EAL Sbjct: 243 VELRPAALDEDGLTATLRTQIHVLDRAHTARVTFAAR-NFRALPAAQEEAMLRVAQEALH 301 Query: 509 NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR--SNHYGMIIMRDRAQSLRGD 566 NAL+HS A V VT+ + + L V D+GCG AIR H G++ MRDR + G Sbjct: 302 NALRHSGAEHVDVTLDRRGSGAVLRVTDDGCGFEPKAIRRAGRHLGLVSMRDRTSGVGGT 361 Query: 567 CRVRRRESGGTEVVVTFI 584 V GT + + Sbjct: 362 LTVESAPGKGTTIEMEVP 379 >UniRef50_B7IV98 Sensor histidine kinase n=76 Tax=Bacillales RepID=B7IV98_BACC2 Length = 372 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 76/374 (20%), Positives = 148/374 (39%), Gaps = 38/374 (10%) Query: 242 EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTD-------DE 294 E + L L + L+ L + L VL+ L + L+ + D DE Sbjct: 5 EKEMHRLEALKEIAELLNEATNLQDMLEKVLHTLLQVMNLQTGWIFFIDESGKHSMLVDE 64 Query: 295 ENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTL------------------------ 330 + T Q + C R V ++ T + Sbjct: 65 NLPEALTWQEKKPMCEGNCWCVERFVNGRLEKATNIIECKRIEDAIECNWGETEDVTHHA 124 Query: 331 KWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEE 390 L ++G+L P H S ++ L++++ Q+ T+ + E++++ +V+ E Sbjct: 125 TIPLRSGSEKFGLLNVAAPHKTHFSEEELALLESIAFQIGTTIQRIQLVEKERKYVVVAE 184 Query: 391 RATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLT 450 R +AR+LHDS+ Q L + + +E+LS I + ++ L+ Sbjct: 185 RNRLARDLHDSVKQLLFSIMLTAKGTLNMTQDR--ELQEMLSYIGELSQEALQEMTLLIW 242 Query: 451 TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNA 510 R + E GL A++ G V++ + L +I++EAL N Sbjct: 243 QLRPEGLEKGLAEAIQNY----GKLLGVQVEVRIDGMVS-IGDEIEEVLWRISQEALHNC 297 Query: 511 LKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVR 570 KH+ +V V + +NQ+ ++DNG G ++ +R + G+ M++R Q ++G ++ Sbjct: 298 KKHASCEKVHVLLKIENNQLFFYIEDNGIGFIQDQVRESALGLKSMKERIQLMKGSFQII 357 Query: 571 RRESGGTEVVVTFI 584 GT++ + Sbjct: 358 TELRKGTKIEIQLP 371 >UniRef50_Q1CZ92 Sensor histidine kinase n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1CZ92_MYXXD Length = 1080 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 66/316 (20%), Positives = 118/316 (37%), Gaps = 24/316 (7%) Query: 300 FTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADS-HTQYGILLATLPQGRHLSHDQ 358 + P + R + + + L ++G L L + Sbjct: 762 HSLPPGEHSLRLRARSPGRDWVEMRPFTLRVAPPLWQRTDVRFGALAVVLLSVVVGLVWR 821 Query: 359 QQLV--------------DTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQ 404 +L+ + +E+ A R + + EER +ARELHD Q Sbjct: 822 TRLLVGRNLALRTLQAEREQALEEAEAGRERLRRLTMRLEAAKEEERKHLARELHDEFGQ 881 Query: 405 SLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRP 463 +L+ +K+ + + S L ++ ++ Q+R L R L E GL Sbjct: 882 ALTAVKLNLG----LMNTFASPSVTRLPEVVALIDRLIGQVRALSVDLRPPQLDELGLVA 937 Query: 464 ALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTV 523 ALE E + + G + P + + I + +I +EA++NAL+H+ A + V + Sbjct: 938 ALEWYLREVARRSGVELVFTASSAPPSLSKGRDIAVFRIIQEAVTNALRHASARRIDVRL 997 Query: 524 AQNDNQVKLTVQDNGCGVPENA----IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 ++L V+D+G G N +G+ M++R + L G V R GT V Sbjct: 998 ETVGCVIRLEVRDDGKGFDVNQVLMGRGPGSFGVFGMQERVRDLGGHFEVTSRPGEGTRV 1057 Query: 580 VVTFIPEKTFTDVQGD 595 V ++ G Sbjct: 1058 VAEVRADEREDFSGGP 1073 >UniRef50_Q3M1D8 Serine/threonine protein kinase and signal transduction histidine kinase with GAF and PAS/PAC sensor n=9 Tax=Bacteria RepID=Q3M1D8_ANAVT Length = 2361 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 75/338 (22%), Positives = 139/338 (41%), Gaps = 16/338 (4%) Query: 253 QANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKG 312 QA L + L + + L + + Q F T G Sbjct: 2035 QAEAALQASEAELRALFSAIPDPLFVFSAEGRFLEIMVLERNLLWQPFEEMIGKTMHQLG 2094 Query: 313 CQLCPRGVLPVGD-RGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQ-QLVDTLVEQLT 370 + + + T + G + + +SHDQ LV + Q Sbjct: 2095 REEADEFLGYIQQVLRTQQILTVEYGAFLNGREMWFSARIAPISHDQVIWLVRDITAQ-- 2152 Query: 371 ATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSREL 430 ++ ++ ++EER +ARE+HD++AQ+ + + QV + E+++ Sbjct: 2153 ---------KQAEEASILEERNRMAREIHDTLAQAFTGILAQVGAAKQVLTDDVEAAQAH 2203 Query: 431 LSQIRNELNASWAQLRELLTTFRLQLTEPG-LRPALEASCEEYS-AKFGFPVKLDYQLPP 488 L I+ + R + R QL E G L+ AL + A + + + Sbjct: 2204 LDLIKELARTGLTEARRSVIALRPQLLEEGSLQSALHRLVAQIRAAATDTTLYYEIEGAV 2263 Query: 489 RLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR- 547 +P+ +LL+I +EAL+NA++++ A E+ V + + +Q L V+DNG G +I Sbjct: 2264 YSLPTEVENNLLRIGQEALTNAIRYANADEIRVELVYDRDQFCLRVRDNGQGFGVGSISA 2323 Query: 548 SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 S +G++ M +RA+ + +R + GTE++VT P Sbjct: 2324 SEGFGLLGMSERAERIGAQLTIRSQPGQGTEIIVTVNP 2361 >UniRef50_D2B7Q9 Histidine kinase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B7Q9_STRRD Length = 412 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 5/234 (2%) Query: 352 RHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKM 411 LS + L +L E + + ++ V++ER +ARE+HD++AQ L+ + Sbjct: 175 EELSRTNRLLEASLAENAGLH---AQLLAQAREAGVLDERQRMAREIHDTLAQGLTGIIA 231 Query: 412 QVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCE 470 Q+ + Q +P R ++N S A+ R + R L L AL + Sbjct: 232 QLQAAE-QMHEVPAPWRRPFGAVKNLARESLAEARRSVDALRPEPLQTARLSDALAGVAD 290 Query: 471 EYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQV 530 +S G PV++ R + LL+ A+EAL+N KH+ AS V VT++ + +V Sbjct: 291 RWSKLHGLPVQVTTTGTARPMTPEAEFALLRTAQEALANVAKHAGASRVGVTLSYLEQEV 350 Query: 531 KLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 L V+D+G G ++ + +G+ IMR R + L G RV G + Sbjct: 351 ALDVRDDGKGFDLASLEAGGFGLTIMRQRVEGLSGSLRVESEPGAGAGISACVP 404 >UniRef50_A7NG30 Multi-sensor signal transduction histidine kinase n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NG30_ROSCS Length = 591 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 69/378 (18%), Positives = 129/378 (34%), Gaps = 37/378 (9%) Query: 245 NQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQP 304 L++A L + L L+ Q L + + + + Sbjct: 215 RDQTRALYEAAYTLATTNDYQNVLEVTLDESQKLAPYTCGMVLLSTGQTNQLFVASSRGL 274 Query: 305 DMTCDDKGCQLCP------------------------RGVLPVGDRGTTLKWRLADSHTQ 340 D ++ + P + T L Sbjct: 275 DPNDQERIVTIGPGAIGRTIRGSDPVVLDNFRDDPELMAFTSLHRHRTACLLPLRFGLNT 334 Query: 341 YGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRH-----QERQQQLIVMEE-RATI 394 YG+++ R H++ + + L L + QER + L EE R + Sbjct: 335 YGVMVFASDHERAFGHEEVEKLAALASYALVALQNAQLIYDLQQERTKLLSKEEEVRHQL 394 Query: 395 ARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL 454 AR+LHD AQ+L+ + M V ++ + P L ++ + +R +L R Sbjct: 395 ARDLHDGPAQALAAITMNVEFIKRLLERDPARVLPELDKLGQLAKRTTHDVRTMLFELRP 454 Query: 455 -QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKH 513 L GL L+ E + + L+ + + L I +EA++NALKH Sbjct: 455 LALETQGLDVTLQQYFERF-RDNPTKIILEADTIDAQLDTKVEGTLFNIVQEAVNNALKH 513 Query: 514 SQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR-----SNHYGMIIMRDRAQSLRGDCR 568 ++A + V + Q ++ ++D+G G +R +G++ + +RA + G Sbjct: 514 AKAQHIWVRLRQTPTTLETIIEDDGRGFDVEKVRASYDQRGSFGLLNIEERASLMGGVAE 573 Query: 569 VRRRESGGTEVVVTFIPE 586 V GT V + Sbjct: 574 VTSTPGKGTTWKVIVPLQ 591 >UniRef50_A0R9R9 Possible sensor histidine kinase domain n=36 Tax=Bacillus cereus group RepID=A0R9R9_BACAH Length = 610 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 62/311 (19%), Positives = 134/311 (43%), Gaps = 7/311 (2%) Query: 281 LRDIELRVYDTDDEENHQEFT-CQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHT 339 L+D ++R + +D E ++ F ++ ++ P + + + + L + Sbjct: 293 LKDGKVRSHISDHSEKNKAFEELSKNLVFNNWKIGTAPEDEIFDSVIRSLVYFPLIVNGE 352 Query: 340 QYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELH 399 G+ +A + + Q + T QL + Q++ +++EER IARE+H Sbjct: 353 LVGMFVAVKSRTAGFFPEDVQSLATFSNQLANVVKTRILISEQEKRMILEERNRIAREIH 412 Query: 400 DSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTE 458 D IAQ+L+ + Q+ Q + P ++++ + +L S ++R + + + Sbjct: 413 DGIAQTLAGVIYQLESAQKKYRDKPIDMQQIVEKSIKDLRGSLGEVRYSIYALKPYPTQQ 472 Query: 459 PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASE 518 GL+ A+ + + ++ + + R + + + +E+L N +KH+QA + Sbjct: 473 LGLKQAIASKIKSLKQEYELDITYHERGHARALSFSKERVIFDTLQESLQNIVKHAQADK 532 Query: 519 VVVTVAQNDNQVKLTVQDNGCGVP-----ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRE 573 V ++ V L V+DNG G HYG++ M ++A+ L ++ Sbjct: 533 TDVLLSYQSEHVLLRVKDNGVGFSLFESMVKTKNEPHYGILHMNEQAEQLGATLQIDSSV 592 Query: 574 SGGTEVVVTFI 584 GTE+ + Sbjct: 593 GKGTEITLLIP 603 >UniRef50_Q0A821 Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A821_ALHEH Length = 446 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 85/388 (21%), Positives = 147/388 (37%), Gaps = 37/388 (9%) Query: 234 VQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDD 293 ++ L + + + L+ + L LS L L T +R D + Sbjct: 47 ENDEIVALRERARAMEVLYTLSTSSERCDDLETLLSGALEQLMRATGATAGVVRRMDAEG 106 Query: 294 EENHQEF-------------TCQPDMTCDDKGCQLCP------------RGVLPVG-DRG 327 D C + + C R P+G + Sbjct: 107 TLRLVAARGVGDDYPENDCGVRPEDCACGEAALRGCLISNPGMKGCRHKRYQRPIGHEDL 166 Query: 328 TTLKWRLADSHTQYGILLATLPQGRHLSHDQ---QQLVDTLVEQLTATLALDRHQERQQQ 384 L L + G+ L Q +++ E L + R + + Sbjct: 167 HLLAVPLTADDRRLGVFSLFLEPVMLQQWQQLNLHRMLQMAGEHLGLAMERIRRESEARL 226 Query: 385 LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ--GDALPESSRELLSQIRNELNASW 442 + +ER+ I ELHD +AQ L+ + ++V L+ G P R L +R L+ ++ Sbjct: 227 QSLEQERSQITHELHDCLAQRLAALGLEVRNLEASHGGGRAPGGLRAGLRHVRRGLDQAY 286 Query: 443 AQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQI 502 +LR+L+ FR+ L GL PAL+ + G V L + P + Q +L+I Sbjct: 287 GELRQLMGQFRIALEGGGLEPALKRLVHRFQRDSGIRVLLSHDWPRGRLSPDQEFQVLRI 346 Query: 503 AREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPE------NAIRSNHYGMIIM 556 +EAL+N HS A V V + + ++L V+D+G G + + +H G+ +M Sbjct: 347 VQEALNNVRNHSGARHVQVALHRIGCDMELVVEDDGRGFADSPPDHRDGDDGHHLGLGVM 406 Query: 557 RDRAQSLRGDCRVRRRESGGTEVVVTFI 584 RDRA ++ G ++ GT + V Sbjct: 407 RDRADAIGGHLEIQSELGEGTRIAVYLP 434 >UniRef50_B8G136 Sensor protein n=1 Tax=Desulfitobacterium hafniense DCB-2 RepID=B8G136_DESHD Length = 497 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 110/255 (43%), Gaps = 7/255 (2%) Query: 335 ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATI 394 + + G+L Q + + + + L+ +L + + + EER I Sbjct: 226 VRAEDEIGVLTQAFNQMINSLSETNRERENLLAKLKENEGMRIQLLEKVMIAQEEERKRI 285 Query: 395 ARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL 454 +RELHD +Q+L+ + + + L+ + S E ++R ++ + ++ + R Sbjct: 286 SRELHDETSQALTSLMVGLKILE--AETSISSVGEKAQEMRQVVSQTLDEVHHMARELRP 343 Query: 455 Q-LTEPGLRPALEASCEEYSAKFGFPVKLDYQL-PPRLVPSHQAIHLLQIAREALSNALK 512 L + GL PAL +Y K+G V + + + + +I +EAL+N K Sbjct: 344 SVLDDMGLIPALGRYIRDYQQKYGTEVDFHASGFEGQRLTASAEVAFYRIIQEALTNVAK 403 Query: 513 HSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI---RSNHYGMIIMRDRAQSLRGDCRV 569 ++QA V V + ++ V V+D+G G + S+ G+ MR+RA L G + Sbjct: 404 YAQADSVSVVLDWREHWVTAIVEDDGVGFDTENVTNEPSHGLGLFGMRERAALLGGSVNI 463 Query: 570 RRRESGGTEVVVTFI 584 + GT V + Sbjct: 464 ESKLGTGTTVFIKIP 478 >UniRef50_Q2LRG0 Signal transduction histidine kinase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LRG0_SYNAS Length = 519 Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats. Identities = 70/291 (24%), Positives = 127/291 (43%), Gaps = 9/291 (3%) Query: 309 DDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQ 368 D+ + + T R D H ++ A+ R + + E+ Sbjct: 230 HDEIARRFYDSLEKQRTYSTEFPCRHKDGHEIICLMRASRIGERLTERRIVVTYEDITER 289 Query: 369 LTATLALDRHQERQQ------QLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA 422 A L+ +E+ + Q + EER IARE+HD + QSL+ KM +S L + + Sbjct: 290 KKAEKELEESREKMRNLSIHLQSVREEERTRIAREIHDELGQSLTAFKMDLSWLGKRMTS 349 Query: 423 LPESSRELLSQIRNELNASWAQLRELLTTFRLQL-TEPGLRPALEASCEEYSAKFGFPVK 481 + + + + ++ + + + R L + GL A+E +E+SA+ G + Sbjct: 350 E-KLLHDKIKAMSGLVDRTIESVHRISADLRPGLLDDLGLVAAMEWQAKEFSARSGIACE 408 Query: 482 LDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV 541 D + + A + +I +E L+N +HS A++V V + ++V L V DNG G+ Sbjct: 409 ADLEAEDVPLDKEPATAVFRIFQETLTNVARHSNATKVFVRLETKGDKVILEVTDNGRGI 468 Query: 542 PENAIR-SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTD 591 + I +G++ MR+RA GD +V S GT V V+ + + Sbjct: 469 TQKQINDPKSFGIMGMRERALLWGGDVQVIGSRSRGTTVKVSIPLKSGEKE 519 >UniRef50_C9NJB7 GAF sensor signal transduction histidine kinase n=7 Tax=Streptomyces RepID=C9NJB7_9ACTO Length = 381 Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats. Identities = 71/306 (23%), Positives = 122/306 (39%), Gaps = 10/306 (3%) Query: 288 VYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLAT 347 + +P D + D L + D G L Sbjct: 75 LPRQHGILAAMLHEAKPQRLADVRKDPRFEGWPDAHPDMSDFLGLPIQDGDETIGALFLA 134 Query: 348 LPQ------GRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 + G + + ++L++ L + L R ER ++L + EER+ +A ELHD+ Sbjct: 135 NKRCPRPTGGCGFTEEDEELLEILAQHAAIALTNARLYERSRELTIAEERSRLAHELHDA 194 Query: 402 IAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPG 460 ++Q L +++ D P ++ L Q+ + +LR + R L E G Sbjct: 195 VSQKLFSLRLTAQAAAALVDRDPVRAKGELQQVATLAGEAVDELRAAVVELRPAALDEDG 254 Query: 461 LRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVV 520 L L + V R +P+ Q +L++A+EAL NAL+HS A +V Sbjct: 255 LVATLRTQVQVLDRAHSARVTFTSAG-VRALPAAQEEAMLRVAQEALHNALRHSGAGQVD 313 Query: 521 VTVAQNDNQVKLTVQDNGCGVPENAIR--SNHYGMIIMRDRAQSLRGDCRVRRRESGGTE 578 V++A++ L + D+GCG + +R H G++ MR RA + G V GT Sbjct: 314 VSLARSTTTAVLRITDDGCGFDPDVVRRAGRHLGLVSMRHRAGGVGGRLVVDSEPGTGTT 373 Query: 579 VVVTFI 584 + + Sbjct: 374 IQMEVP 379 >UniRef50_O32198 Sensor histidine kinase liaS n=5 Tax=Bacillus RepID=LIAS_BACSU Length = 360 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 120/247 (48%), Gaps = 5/247 (2%) Query: 353 HLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQ 412 L+ +++ + + Q + ++ ++ EER +AR+LHD+++Q L + M Sbjct: 113 QLNEMAKRVELQVASLQKLSNERAEWQAQMKKSVISEERQRLARDLHDAVSQQLFAISMM 172 Query: 413 VSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEE 471 S + + + + + + + + ++R LL R L GL+ L +E Sbjct: 173 TSAVLEHVKDADDKTVKRIRMVEHMAGEAQNEMRALLLHLRPVTLEGKGLKEGLTELLDE 232 Query: 472 YSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVK 531 + K P+ +++ + + HL +I +EALSN +HS+AS+V V + ++Q++ Sbjct: 233 FRKKQ--PIDIEWDIQDTAISKGVEDHLFRIVQEALSNVFRHSKASKVTVILGIKNSQLR 290 Query: 532 LTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI--PEKTF 589 L V DNG G + ++++ YG+ M++RA + G V E GT++ V PE+ Sbjct: 291 LKVIDNGKGFKMDQVKASSYGLNSMKERASEIGGVAEVISVEGKGTQIEVKVPIFPEEKG 350 Query: 590 TDVQGDT 596 + + + Sbjct: 351 ENERDSS 357 Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 52/164 (31%), Gaps = 4/164 (2%) Query: 164 ALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAEL 223 + + RL L+ + +F R G +E+ + LN M+ + Sbjct: 62 VTVGFASGYMYGNRLKTRIDTLIESILTFENGNFAYRIPPLGDDEIGLAADQLNEMAKRV 121 Query: 224 AESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRD 283 A L++ E+ + + + +RL L + +S L + +T Sbjct: 122 ELQVASLQKLSNERAEWQAQMKKS--VISEERQRLA--RDLHDAVSQQLFAISMMTSAVL 177 Query: 284 IELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRG 327 ++ D + + ++ L + + +G Sbjct: 178 EHVKDADDKTVKRIRMVEHMAGEAQNEMRALLLHLRPVTLEGKG 221 >UniRef50_Q0KDJ4 Signal transduction histidine kinase containing PAS/PAC sensor domain n=3 Tax=Burkholderiales RepID=Q0KDJ4_RALEH Length = 355 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 121/278 (43%), Gaps = 12/278 (4%) Query: 310 DKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQL 369 + + C G T+K + + +Q+L+++ + Sbjct: 76 RRRYEECRHGQDGSLRWFDTIKMPIRGQDGAVVGTVGISRDITDRKRSEQELLESRAQLR 135 Query: 370 TATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP-ESSR 428 + L Q + ER I+RELHD + QSL+ +++ +S ++ Q ++ R Sbjct: 136 ELSAYL--------QSVREAERTRISRELHDELGQSLTALRLGLSFIEAQQGPDAGDACR 187 Query: 429 ELLSQIRNELNASWAQLRELLTTFRLQL-TEPGLRPALEASCEEYSAKFGFPVKLDYQLP 487 + L ++ +++ ++ + R L E GL A+E E +S + G +L Q P Sbjct: 188 KHLQMLKQIADSTVDAVQRIAADLRPPLLDELGLTAAIEWLAESFSERGGIACELALQ-P 246 Query: 488 PRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR 547 + + + + +IA+EAL+NA +H +A V V ++ ++L V DNG G+ + Sbjct: 247 VGELSAELSTAVFRIAQEALTNACRHGRADRVRVELSAAGGTLRLVVADNGRGIDASRAG 306 Query: 548 -SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 G++ MR+RA L G V + GGT V Sbjct: 307 HRRSLGLLGMRERALMLGGKLAVTSEKGGGTRVEAQIP 344 >UniRef50_C7MRK1 PAS domain S-box n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK1_SACVD Length = 552 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 78/399 (19%), Positives = 144/399 (36%), Gaps = 28/399 (7%) Query: 210 AMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLS 269 L L+ M+ E+ + A+ ++ ++ L L ERL+ Sbjct: 169 GSLRATLDAMAREVCTTTAISAAQI----LAVDDPRDELRLL--GMAGFGETTDFVERLA 222 Query: 270 PVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTT 329 R ++R + + + + D + ++ D + Sbjct: 223 E--------CRRRGADIRFLEVLEHGEPVVVLHRKPVIMADPAWE-PLHVIMDWPDWDSF 273 Query: 330 LKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVME 389 + L GI+ A G + + + + R + ++ Sbjct: 274 VSMPLVVRGRTVGIINAYYAPGEDPGPSSLTFLSAMADHAAVAIETAALLTRTRSRAQLD 333 Query: 390 ERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSREL---LSQIRNELNASWAQLR 446 ER +AR+LHDS+ Q L M MQ L+ Q + +L ++ + A LR Sbjct: 334 ERRKLARDLHDSVVQHLFSMGMQAKALRAQLERPDADLSQLRGGAQELAELSQNALADLR 393 Query: 447 ELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQ-LPPRLVPSHQAIHLLQIAR 504 L+ R +L E GL A+ + A+ G + + + A + +I + Sbjct: 394 GLVFELRPMELAERGLVDAVRSHAASLQARTGLTIDVRAPVGDALDLDLEVAEDVYRIVQ 453 Query: 505 EALSNALKHSQASEVVVTV---AQNDNQVKLTVQDNGCG-----VPENAIRSNHYGMIIM 556 EAL N +KH+ A++ VT+ + + + + DNG G A R G+ M Sbjct: 454 EALHNVIKHANATKAEVTITTPEHDHRGLLVKISDNGRGKGQKPRDRTAFRRESLGLQSM 513 Query: 557 RDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGD 595 R+RA+ RG R SGG V V+ + ++ + Sbjct: 514 RERAERWRGRLVAGPRPSGGWTVAVSLPAQGSYAMKEAS 552 >UniRef50_C5V7S2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7S2_9PROT Length = 647 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 1/221 (0%) Query: 365 LVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP 424 + E+L + + R + I +E IARE+HD + Q+L+ ++M VS +++ Sbjct: 425 IEEKLLHSQQMLRELSAHLENIREDEHRHIAREIHDELGQALTALRMDVSLVRLNFGEAN 484 Query: 425 ESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDY 484 L + + + +R + ++ R + G+ ALE EE++ +L Sbjct: 485 PQLLTHLQSMSQRVQRTVDIVRHITSSLRPGALDMGIVAALEWLAEEFTGYTQIQCELAL 544 Query: 485 QLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN 544 + A + +I +E+L+N +H+QA++V V V ++++++ V DNG G Sbjct: 545 NDGNIALDEFSATAVFRIVQESLTNIARHAQATQVEVIVTRSEDELCFEVCDNGTGFDPG 604 Query: 545 AIRS-NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 AI + +G+I +R+R L G + R+ GT + V Sbjct: 605 AIENCKSFGLIGIRERVAMLSGHFEIESRQGAGTCLRVHIP 645 >UniRef50_C1F9F5 Two component regulator propeller/histidine kinase domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9F5_ACIC5 Length = 1025 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 3/214 (1%) Query: 382 QQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNAS 441 + V+ ER IARE+HD++AQ + + +Q+ + E +R L R+ +S Sbjct: 812 SEFQAVLRERTRIAREIHDTLAQGFAAVSVQLEVVSRLLPNATEGARHALDTARSLARSS 871 Query: 442 WAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLL 500 R + R + L L + A +L+ R + L Sbjct: 872 LQDARTSIWDLRSQSSEQEDLATRLRKLADHLCAPANIKAQLEVNGAYRPLTPEVETELT 931 Query: 501 QIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV--PENAIRSNHYGMIIMRD 558 +IA+EA+ NA++HS+ + + + ++ ++ Q++L+V+DNG G A R HYG+ M + Sbjct: 932 RIAQEAIVNAVRHSETASIALRLSFHERQIELSVRDNGRGFSGAPPAARPGHYGITGMHE 991 Query: 559 RAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDV 592 RA+ + G + R GTEV +T ++ + Sbjct: 992 RAERIGGKLTIESRPGEGTEVHLTLPLKRDGGEK 1025 >UniRef50_C1YIX9 Signal transduction histidine kinase, COG4585 n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YIX9_NOCDA Length = 412 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 105/247 (42%), Gaps = 4/247 (1%) Query: 342 GILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDS 401 G L+ + + + + ++ V++ER +ARE+HD+ Sbjct: 165 GGLVIASKAAEQHRERRVTVARLEAALEENAGLHAQLLTQAREAGVLDERQRMAREIHDT 224 Query: 402 IAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPG 460 +AQ L+ + Q+ Q + P ++R + S A+ R + R QL E Sbjct: 225 LAQGLAGIVTQIQAAQRVWE-DPGAARPHADRALGLARESLAEARRSVQALRPGQLAESQ 283 Query: 461 LRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVV 520 L AL ++ + G LD + + L ++A+EAL+N +H+ AS V Sbjct: 284 LPEALGELTRRWAEEHGVRPDLDVTGERVALSPAIEVVLFRVAQEALTNVARHADASRVG 343 Query: 521 VTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVV 580 VT++ +D+ V L V+D+G G+ + +G+ MR R + + G + E GT V Sbjct: 344 VTLSYSDDVVLLDVRDDGRGI--TGHNQHGFGLSSMRQRVRGIGGALEIESGEGEGTAVS 401 Query: 581 VTFIPEK 587 T Sbjct: 402 ATVPAIP 408 >UniRef50_B0K3K4 Histidine kinase n=11 Tax=Thermoanaerobacterales RepID=B0K3K4_THEPX Length = 388 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 73/395 (18%), Positives = 154/395 (38%), Gaps = 34/395 (8%) Query: 219 MSAELAESYA-VLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQN 277 M+A + +Y L+ V++ +E + + + + + L +L + + N Sbjct: 1 MNANVEVTYKKRLDNIVEKTIEVIESSKEQIFDILEKAKE--EARRLEAQLEELKIQVIN 58 Query: 278 LTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADS 337 + +++EL F + ++ + + + LA Sbjct: 59 VI--KEVELCERKEKKCRLKLAFVSKQFGHLSEQAIREAY-------EEAKEAQIELALK 109 Query: 338 HTQYGILLATLPQGRHLSHDQQQLVDT---LVEQLTATL-----ALDRHQERQQQL---- 385 + L+ + D + +++ LV Q+ L L + + +QL Sbjct: 110 RREEKELIEKRNELERKLVDNKAIIEKAEKLVSQINVALNYLNRDLKKMNTQLEQLKDKR 169 Query: 386 --------IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNE 437 EER IARE+HD AQ+++ + + + E ++ L ++N Sbjct: 170 ALSVKIIEAQEEERKRIAREIHDGPAQAMANVLSKSELCEKLITKDIEQAKIELKNLKNI 229 Query: 438 LNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQA 496 + S ++R+++ R L + GL PAL + +S + G V + + Sbjct: 230 VQQSLKEVRKIIYDLRPSALDDLGLIPALSRYIKNFSEETGIFVDFSVLSDYKRLSPEIE 289 Query: 497 IHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIM 556 I ++ +EAL+N KHS+A V + + ++D+G G + I YG++ M Sbjct: 290 ITCFRVVQEALTNIKKHSKAKNASVKFEFGMRFISIIIKDDGIGFDKENI-GQGYGLMGM 348 Query: 557 RDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTD 591 R+R + L G + ++ GT++ ++ D Sbjct: 349 RERIEILNGKFEISSFKNNGTQIYISIPVRGVEDD 383 >UniRef50_C1XTQ5 PAS domain S-box protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XTQ5_9DEIN Length = 682 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 3/262 (1%) Query: 328 TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIV 387 T + + G+L+ LP G ++ + + + + R E +++ +V Sbjct: 420 TVVCLPMRFREESVGVLVIYLPGGEP-GPNEMAFLTPIADLAAIAVENARLSEIKERQVV 478 Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRE 447 +EER +ARELHDS++Q+L + + Q + P++ +E L + A A++R Sbjct: 479 LEERQRLARELHDSVSQALYGIALGARAAQNAAERNPQALKEPLEYVLALAEAGIAEMRA 538 Query: 448 LLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREA 506 L+ R L E GL AL A++ V+ + + L ++A+EA Sbjct: 539 LIFELRPESLQEEGLVAALARQAAAVRARYELQVEARLE-EEPELSLDAKEALYRVAQEA 597 Query: 507 LSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGD 566 + N +KH++A V +T+ V L VQD+G G H G MR+R++++ Sbjct: 598 IHNVVKHAEARRVWLTLESRPEAVLLEVQDDGKGFDPTQDFPGHLGQRSMRERSEAIGAR 657 Query: 567 CRVRRRESGGTEVVVTFIPEKT 588 V GT V V + Sbjct: 658 LTVESAPGQGTRVQVRLPLQTP 679 >UniRef50_B8G173 Histidine kinase n=2 Tax=Desulfitobacterium hafniense RepID=B8G173_DESHD Length = 482 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 109/236 (46%), Gaps = 9/236 (3%) Query: 360 QLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQ 419 Q + LVE+L A + + ++ +ER I+RELHD +QSL+ + + + L Sbjct: 249 QEREALVEELQAKETVRQELLKKVISAQEDERKRISRELHDEASQSLTSLILGLKYLSEL 308 Query: 420 GDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGF 478 + E S + S+++ +++ ++ + R L + GL PA+E + + ++ Sbjct: 309 EEH--EKSPAMASELKELASSTLKEVHRIAVELRPTVLDDMGLVPAIERFVKFFKRQYRL 366 Query: 479 PVKLDYQLP-PRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDN 537 V Q +P+ I L +I +EAL+N K+++A + + + V L ++D+ Sbjct: 367 DVDFHAQNRIASRLPNEIEITLYRIVQEALTNVAKYAEARNASIVLEIKPDYVNLIIEDD 426 Query: 538 GCGVPEN-----AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 G G + + +H G+ M++R L G+ + GT V V E+ Sbjct: 427 GKGFDVDQVLKSSASDSHLGIAGMQERTSLLGGEFTIESSPDQGTAVYVRIPMERR 482 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 72/410 (17%), Positives = 144/410 (35%), Gaps = 34/410 (8%) Query: 8 PLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQ----------GSAHAINKAGS----- 52 P + ++ ++ ++ + L G+ V +Q G A A + A Sbjct: 11 PQSAPIKMKIMGIVILFVSLLGLIVIMETRSHMQQILREQLKERGRAIASDVAARSTNPM 70 Query: 53 LRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIP 112 L S+ L + I+ + + EL +G + L L+ IP Sbjct: 71 LIGDSFSLYEILQGLPSHYEDIRYLMIFDKNGELVTHTFGEGVPSGLLNLRS------IP 124 Query: 113 ALMRAQNRETVSAD----VSQFVAGLDQLVSGF-----DRTTEMRIETVVLVHRVMAVFM 163 A + N + +++ + V D V + + I+ + + + V + Sbjct: 125 ADLSHDNTLSFNSNEGEIIDVLVPIADGKVGWLRLGMSEISIYSSIDQLSQLLLITTVII 184 Query: 164 ALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAEL 223 +LL +F I + + +P R L A + +S D++ R +I G +E+A LG N M+ + Sbjct: 185 SLLGIFGAILISHLVTKPIRDLAAASQGISLGDYSLRVSIYGTDEIADLGHNFNAMALSI 244 Query: 224 AESYAVLEQRVQEKTAGLEHKNQILSFLWQA---NRRLHSRAPLCERLSPVLNGLQNLTL 280 E V+E A + ++L + A R+ SR E + + + L Sbjct: 245 QNYAQEREALVEELQAKETVRQELLKKVISAQEDERKRISRELHDEASQSLTSLILGLKY 304 Query: 281 LRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQ 340 L ++E +E +L P + +G ++ + Q Sbjct: 305 LSELEEHEKSPAMASELKELASSTLKEVHRIAVELRPTVLDDMGLVPAIERF-VKFFKRQ 363 Query: 341 YGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEE 390 Y + + Q R S ++ TL + L + ++ E Sbjct: 364 YRLDVDFHAQNRIASRLPNEIEITLYRIVQEALTNVAKYAEARNASIVLE 413 >UniRef50_B4D6U9 Multi-sensor signal transduction histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6U9_9BACT Length = 638 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 76/364 (20%), Positives = 145/364 (39%), Gaps = 15/364 (4%) Query: 238 TAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENH 297 T + + + + ++S + LNG+ + Y ++ Sbjct: 274 THDITARKRAEEAQVRLAAIVNSSDD--AIIGKTLNGIITTWNPGAERMFGYCAEEIVGK 331 Query: 298 QEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHD 357 T P ++ L G T++ R S ++ + Sbjct: 332 SMLTLIPPDRVHEEKEILSRIGAAESVVHFETVRIRKDGSCVDISATISPINDSAGKIVG 391 Query: 358 QQQLVDTLVEQLTATLALDRHQERQQQL------IVMEERATIARELHDSIAQSLSCMKM 411 Q+ + EQ A L + ++L EER I+RE+HD +AQ L+ +KM Sbjct: 392 ASQIARDITEQKRALEQLRNSHAQLRELTGRLHAAREEERGRISREIHDVLAQQLTRLKM 451 Query: 412 QVSCL-QMQGDALPESSRELLSQ----IRNELNASWAQLRELLTTFRLQ-LTEPGLRPAL 465 +S + + ++ E++R+ L + +++S ++ + T R L GL A+ Sbjct: 452 DLSWIDKRLAQSVDETTRQALGEKVRSATELVDSSIGAVQHIATELRPVVLDALGLAAAV 511 Query: 466 EASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ 525 E ++ G ++D +P A L +I +E L+N ++H+ A+ V V++ Sbjct: 512 EWQVTQFQEHTGVQCQVDIDGEEPRLPHDHATGLFRILQETLTNVMRHAGATLVEVSLRM 571 Query: 526 NDNQVKLTVQDNGCGVPENAIRSNH-YGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 + + L+V+DNG G+ + + H G++ MR+RA G + GT VVVT Sbjct: 572 EPDILTLSVRDNGRGITAGELSNMHSIGLLGMRERALLFGGKVTIHGIPEKGTTVVVTMP 631 Query: 585 PEKT 588 Sbjct: 632 LSAA 635 >UniRef50_B1ZVL9 Multi-sensor signal transduction histidine kinase n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZVL9_OPITP Length = 644 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 103/555 (18%), Positives = 179/555 (32%), Gaps = 44/555 (7%) Query: 75 KEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGL 134 + + A R + +L+ + + L PAL RA++R V A Sbjct: 95 QALRLGADDFVSRRLGYLESLPQRLRDAIER--HRLQPALARARSRPRRILLVDDDPAEA 152 Query: 135 DQLVSGFDRTT-EMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVS 193 + LV R + I+T + + ++ L P + Sbjct: 153 EMLVRLLARRAPHLAIKTAANRSSGLEALVTGEEYDLVLGLHRP---PANDCFELIKTAR 209 Query: 194 HRDFTQRANISGRNEMAM-----LGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQIL 248 R F + + ++ A L R+ E L Sbjct: 210 DRGFHLPIIVLADSSAEEAVAAAFSHGASDFVVAPRRHAAELALRIDLAIDRHELAVAGL 269 Query: 249 SF---LWQANRRLHSRAPLCERLSPVLN--------------GLQNLTLLRDIELRVYDT 291 L + L + +RL L ++ + + Sbjct: 270 RARTELADRRQLLAALGASDQRLKTALEAGRIGLWSWEVGTGHMEFSARWKAQIGYAENE 329 Query: 292 DDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLP-- 349 E+ + F+ + P D + + D + +L A L Sbjct: 330 IGEDAAEWFSRCHPDDLANLHTLTARYLAAPWPDFNVEYRLKHKDGSWRCFLLHAALETD 389 Query: 350 ---QGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQL--IVMEERATIARELHDSIAQ 404 + R + Q + +Q R Q+ ++L + ER ++ARELHD I Q Sbjct: 390 DPGEPRRMVGAQIDVTQLKQQQADIASTSARLQQLSRRLLNVQEMERRSLARELHDEIGQ 449 Query: 405 SLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQL-TEPGLRP 463 L+ K+ + + + L + L+ AQ+R L R L + GL P Sbjct: 450 VLTVAKIHLQSTVLLPECG--RVAGRLKEPVALLDRLLAQVRSLSLNLRPPLLDDLGLVP 507 Query: 464 ALEASCEEYSAKFG-FPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT 522 AL ++ + G V L +IA+EAL+NAL+H++A V +T Sbjct: 508 ALHWLLHQHQSHTGGPRVHLATDPELARFDPTLETACFRIAQEALTNALRHARAQGVHLT 567 Query: 523 VAQNDNQVKLTVQDNGCGVPEN-----AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 + D +++L VQD+G G A R G++ M +RA G + GT Sbjct: 568 LTVQDQKLRLRVQDDGVGFDATSARGRAERGGSLGLLGMHERALLAGGTLTLLSAPGRGT 627 Query: 578 EVVVTFIPEKTFTDV 592 E+ F Sbjct: 628 EIEAIFPLSIPPGSR 642 >UniRef50_C0ZJS5 Two-component sensor histidine kinase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZJS5_BREBN Length = 365 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 69/355 (19%), Positives = 141/355 (39%), Gaps = 19/355 (5%) Query: 257 RLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLC 316 + + + + + + + + L+ D E R+ + + ++ D C+LC Sbjct: 8 AMGTSSEVLSLMQSIFANVSDAILVIDQEGRIVKANAALEQMTGWTEEELIRDKHICELC 67 Query: 317 PRGVLPVGD---------RGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVE 367 + + R + + R Q +LV L + Sbjct: 68 LGMATCMEETSCADCFFKRVQMPSFEMRLRTKSGVDYPVAASSARLEDESQGKLVMILRD 127 Query: 368 Q-LTATLALDRHQERQ---QQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDAL 423 + +R+Q + EER IARELHD + Q+L + + ++ ++ + L Sbjct: 128 MSAQQRVEKERYQYKLTNFAIQAQEEERKRIARELHDGVGQALYSILVGLNVVRQR--EL 185 Query: 424 PESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKL 482 E + ++++ N + + +++ + R L + GL PAL + + F V+L Sbjct: 186 SEPVMQHVAELVNMTSKAMEEVKRMALELRPSALDDLGLLPALRSLMKRVEKTFHIQVEL 245 Query: 483 DYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP 542 Q R + L +I +EA++N K+++AS + + + ++ +T+ D+G G Sbjct: 246 HVQGEKRRYSAAMETALYRIVQEAMTNTAKYAKASHLGIMFENREKEIVVTIVDDGVGFE 305 Query: 543 ENAIR--SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI-PEKTFTDVQG 594 G+ M++RAQ L G +R GT V+V P++ D Sbjct: 306 VEKTLKIGKGLGVFGMKERAQLLGGTVDIRSAPEEGTTVIVRIPVPKEGVEDEHS 360 >UniRef50_C6NZS6 Multi-sensor signal transduction histidine kinase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZS6_9PROT Length = 902 Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 141/363 (38%), Gaps = 34/363 (9%) Query: 260 SRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRG 319 + + + PV L + + DT+ + + T ++ CQ Sbjct: 539 AEHDANKTVRPVAQTGYEEGYLESVNVTWADTERGQGPTGKAIRTMQTVVNQDCQ-FNSD 597 Query: 320 VLPVGDRG------TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATL 373 + P + +++ L + G L S + L++ L + L+ + Sbjct: 598 MAPWREAAIKRGYQSSIGIPLVINGKAIGALTINSADPFTFSKGEVVLLEDLADNLSYGI 657 Query: 374 ALDRHQERQQ---------QLIVMEERAT------------------IARELHDSIAQSL 406 R + Q +L + + IAR+LHD + Q L Sbjct: 658 QTLRTRNEHQSALTFLQKSELSLEQSNQQLRDLTIRREEAREDERKRIARDLHDELGQIL 717 Query: 407 SCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALE 466 + ++M +S ++MQ A + + + I + ++++ +R++ + R E G+ ALE Sbjct: 718 TVLRMDLSVMRMQFGASNPALLDQIKNILSRVDSTIQVVRDVASKLRPGALEAGIVAALE 777 Query: 467 ASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN 526 E++ + L + +A + +I +E+L+N +H+ A+ V V++++ Sbjct: 778 WQVAEFAKRSDIHFDLKIDESNIDLDDERATAIFRIVQESLTNVTRHAAAANVCVSLSRL 837 Query: 527 DNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 + L + D+G G + +G++ +R+R+ L G +R GT V V Sbjct: 838 QDNYILEIIDDGRGFDTEMLSGRTFGLMGVRERSMMLEGTVDIRSSPGKGTHVTVYIPVM 897 Query: 587 KTF 589 K Sbjct: 898 KRQ 900 Score = 55.0 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 34/245 (13%), Positives = 72/245 (29%), Gaps = 13/245 (5%) Query: 144 TTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANI 203 +++R V + +A+ + V + R+ P QL A+ A+S RA + Sbjct: 272 YSQLRKMLVRNILFSLAMLSFVFGVA--WLIARRISNPISQLTAVTRAISQGSRVARAEL 329 Query: 204 SGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAP 263 G E+ + N M + E ++E L +I + Sbjct: 330 VGPPEIREVAQEFNEML----KIRWHTEAALRESEINLSEALKIARMGHWEYELITDEFV 385 Query: 264 LCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPV 323 L ++ + + + E Q D D+ Q P Sbjct: 386 LNDQYYSLHHTSAEKMGGYRMR-------SAEFSQRLVHPGDAHLIDEYIQRSLSVKAPE 438 Query: 324 GDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQ 383 + D T++ ++ + Q + + V+ + + + R Sbjct: 439 LHLQAEARIICGDGKTRWVLVRFKIEQDNNGVTTRLLGVNQDITERKHAEQTRQKLNRAL 498 Query: 384 QLIVM 388 L+ Sbjct: 499 VLVSE 503 >UniRef50_Q81FX4 Two-component sensor protein yvqE n=44 Tax=Bacillus cereus group RepID=Q81FX4_BACCR Length = 351 Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 7/229 (3%) Query: 361 LVDTLVEQLT----ATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL 416 L L EQ T E +Q + +ER +ARELHDS++Q L M M +S + Sbjct: 116 LARRLEEQAGLFQKVTNERAHWNEEMRQEAISQERHRLARELHDSVSQQLFAMSMMMSAI 175 Query: 417 QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAK 475 Q P+ +++ L + N + + +++R LL R QL L +E E S K Sbjct: 176 NEQITEFPDVTKKQLQLVENMVVNAQSEMRALLLHLRPVQLEGKKLTEGIEELLTELSRK 235 Query: 476 FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQ 535 ++ + + P + HL +I +EALSN L+H++A + V + + D L + Sbjct: 236 QHMKIE--WLIEPIELKKGVEDHLFRIVQEALSNTLRHAKAKKTEVRLRKIDQYAILKII 293 Query: 536 DNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 D+G G ++ YG+ M++R + G +V + GT++ V Sbjct: 294 DDGVGFEVGVNKAGSYGLRSMQERVHEIGGTLKVLSFPAKGTQIEVKVP 342 >UniRef50_B1ZR83 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Verrucomicrobia RepID=B1ZR83_OPITP Length = 742 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 117/268 (43%), Gaps = 7/268 (2%) Query: 334 LADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLAL---DRHQERQQQLIVMEE 390 ++ + ++ + + ++ V + TA L + R E Q V+ E Sbjct: 465 VSRKNAALRDVIRERESAQRELQEAHDTLEQKVAERTAQLHVEMGARKTEEVQFRAVLAE 524 Query: 391 RATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLT 450 R +AR+LHD++ Q+L+ + +Q+ E S+ L RN L+ S LR + Sbjct: 525 RTRLARDLHDTLEQTLTGIALQLDTAAKLFGRDGEQSQHHLQLARNWLHQSQVDLRRSIW 584 Query: 451 TFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSN 509 R +L + L AL S E+ + R +P ++L+I +EA +N Sbjct: 585 DLRSRELEQFDLAKALRQSAEQLVDGTSLTIDFRTTGDRRPLPEVVEENVLRIGQEAFTN 644 Query: 510 ALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS---NHYGMIIMRDRAQSLRGD 566 KH++A V+ T+ + + ++L ++D+G G A S +H+G++ M +RA+ L G Sbjct: 645 IAKHARARRVLATLTFSPSTLRLRIEDDGVGFNVPAAPSAAESHFGLLGMTERAKRLGGH 704 Query: 567 CRVRRRESGGTEVVVTFIPEKTFTDVQG 594 +V GT + + E Sbjct: 705 IKVDSAPGQGTSLTLEVPLEPLSERTAA 732 >UniRef50_C5UZV3 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZV3_9PROT Length = 401 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 82/330 (24%), Positives = 142/330 (43%), Gaps = 19/330 (5%) Query: 268 LSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRG 327 L V G +L L EL E ++ D + Q R P G Sbjct: 73 LPYVSEGCLDLLGLSATEL----KQHPERLIKYLHADDAASFHQSMQHSARHATPWNWEG 128 Query: 328 TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQL-- 385 TL D ++ L A + L + LV + + A + L +++ ++L Sbjct: 129 RTLLPP--DGEIKWVNLRAKYRKTDLLGTHWKGLVVNITQNKQAEIELVHSRQQLRELSS 186 Query: 386 ----IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNAS 441 I EER IARE+HD I L+ +KM ++ ++ + + + +E + N L+ + Sbjct: 187 HIENIKEEERTRIAREIHDEIGVLLTALKMDLAWMRQRFPSDDGALQEKSQVMANLLDTA 246 Query: 442 WAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLL 500 L+ + R L G+ A+E E++ + P K+ V Q+I L Sbjct: 247 GIAANNLVHSLRPGSLDCFGIVAAIEIEATEFTKRTATPCKIIKSSDNLDVSDEQSITLF 306 Query: 501 QIAREALSNALKHSQASEVVVTVAQN-----DNQVKLTVQDNGCGVPENAI-RSNHYGMI 554 ++ +E L+N +KH+QA V V ++Q+ D V+L V D+GCG E A + +G+ Sbjct: 307 RVFQETLNNIMKHAQARRVQVKISQSATDQIDKYVELIVSDDGCGFDEAARNKPRSFGLR 366 Query: 555 IMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 +++R + L G + R GT++ V Sbjct: 367 GIQERIRQLDGTLSITSRPGKGTKIAVRLP 396 >UniRef50_Q2B2D2 Two-component sensor histidine kinase n=2 Tax=Bacillus RepID=Q2B2D2_9BACI Length = 345 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 9/256 (3%) Query: 335 ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATI 394 + + + G++ L +Q V L E + VMEER + Sbjct: 98 SYENDEIGLIAEELDGLADYIQEQVHSVQRLAE------ERSSLAQSAHAAAVMEERQRL 151 Query: 395 ARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL 454 AR+LHD ++Q L + M S D E +++ L +I + ++R LL R Sbjct: 152 ARDLHDVVSQQLFALSMMSSAALKVFDRDSEKAKKQLKEISGIAAKAQGEMRALLLHLRP 211 Query: 455 -QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKH 513 QL++ L + E K + + + HL ++ +EALSN L+H Sbjct: 212 IQLSDDTLCDGIIKLIHELRGKT--TIDFQASIDEIELSKAAEEHLFRVVQEALSNILRH 269 Query: 514 SQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRE 573 + AS++ +T+ + ++ L + D+G G + R YG+ MR+R + + G +R ++ Sbjct: 270 ADASKIKLTLTEKEDYTYLFIGDDGKGFDPHIERVASYGLKTMRERCEEIGGIFNIRSKQ 329 Query: 574 SGGTEVVVTFIPEKTF 589 GT + + + Sbjct: 330 GEGTYIEIRIPLKGRE 345 >UniRef50_Q3SJC2 Multi-sensor Signal Transduction Histidine Kinase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJC2_THIDA Length = 1168 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 64/341 (18%), Positives = 125/341 (36%), Gaps = 15/341 (4%) Query: 257 RLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLC 316 +L S S V G L L + D + D ++ Sbjct: 832 QLVSAPGAEPTFSYVSEGASALCGLASETVL----ADAPRFLDLIFDEDRPLFEQSMAQS 887 Query: 317 PRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVE------QLT 370 RG+ P G + R + L AT ++ + + +L Sbjct: 888 ARGLYPWSWEG---RIRAGSLGETWVSLRATPTLLLDGGVVWDGIILNVTQTKLNELELR 944 Query: 371 ATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSREL 430 + R ++ + +ER IARE+HD + Q L+ ++M+VS + M E Sbjct: 945 QSRESLRLLTAHREAVREDERKHIAREIHDELGQLLTALRMEVSAVGMAFGRDNPELDEK 1004 Query: 431 LSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRL 490 + ++ +N + +R++ T+ R + GL A++ E+ + + Sbjct: 1005 VRSMKTVINQTIQTVRQVATSLRPAALDLGLETAIDWLASEFCKRNAVECAVAIPGE-IA 1063 Query: 491 VPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR-SN 549 + +A L +I +E L+N +H+ A+ V + + ++ L V DNG G + Sbjct: 1064 LDEVRATALFRILQETLTNIARHAGATSVSIKLKTTGEEICLKVTDNGRGFDPEEAKQGG 1123 Query: 550 HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFT 590 +G+ + +R L G ++ G E+ V + Sbjct: 1124 SFGLKGIAERVLILGGTMTIKSAPGQGAELAVCIPAADPAS 1164 >UniRef50_A9B363 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B363_HERA2 Length = 517 Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 70/374 (18%), Positives = 141/374 (37%), Gaps = 27/374 (7%) Query: 216 LNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGL 275 + + + Q+V++ L + L L L S L L+ V Sbjct: 167 FVTLFGYVTNQSVLTRQKVEQLAQELAQERDYLQQLSAITAALSSEVQLARVLAQVAEAG 226 Query: 276 QNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLA 335 ++L + + + + + D ++ P +L+ L Sbjct: 227 RSLANAQAVTVALLE-------------------DPEWRIVASVGSPDT-NLPSLEIMLH 266 Query: 336 DSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIA 395 G L Q + +Q + + + + E+ + + ER +A Sbjct: 267 AKGETIGRLNYWSIQPTN--AALRQALQPFADAAAMAIYNAQLYEQARFSATLAERNRLA 324 Query: 396 RELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTF-RL 454 R+ HD++AQ L+ +++Q+ PE ++ L + + A+ LR + Sbjct: 325 RDFHDTLAQQLTGLRLQIEAGMRNL-HQPEKAQLRLQKAYDLALAALHDLRRSVWNLSAP 383 Query: 455 QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHS 514 + L L + + + + + +PS AI +L++ EALSN KH+ Sbjct: 384 AIDGRVLSDVLAELVDTFHQRTNIQSQYSHDGQELTLPSDVAIQVLRVVNEALSNVEKHA 443 Query: 515 QASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR---SNHYGMIIMRDRAQSLRGDCRVRR 571 QA V + Q+++TV D+G G A++ S +G+ MR+R Q ++G ++ Sbjct: 444 QAKHVAIRSTVAAGQLQITVSDDGQGFELAAVQQTASGGFGLTSMRERTQLIQGSLSIQS 503 Query: 572 RESGGTEVVVTFIP 585 + S GT + + Sbjct: 504 QPSAGTLLTLCLPL 517 >UniRef50_B4WLR8 GAF domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WLR8_9SYNE Length = 1245 Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 76/458 (16%), Positives = 151/458 (32%), Gaps = 79/458 (17%) Query: 212 LGTALNNMSAEL---AESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERL 268 + A++ + + VLE+R ++ + ++ L + L + L Sbjct: 788 VAAAISRQAQDEALRRAETTVLEERECAARNRAAELVKLNETIARSLSTLTATPELDDFL 847 Query: 269 SPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGT 328 +L+ + L +YD D + +Q T Q P+ + Sbjct: 848 GQLLDQMSEQIGACKAYLFLYDKDTDTLNQYVTAQAGEIHRGVAPGDPEMFRHPIPSDRS 907 Query: 329 T-----------------------LKWR------------------LADSHTQYGILLAT 347 L W + + G + Sbjct: 908 EVWKMIVNSSKPFTLDRKQPAQAELCWPDTLPWHEAEGHLGATCACMKVGNKPIGFITFA 967 Query: 348 LPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQ----QLIVMEERATIARELHDSIA 403 L+ +Q + + L Q T + L R +R Q + +ER +ARE+HD++A Sbjct: 968 FRHLPTLTDEQLEFIQALTNQATLAIHLTRLAKRSQTAALSAALTDERNRLAREIHDTLA 1027 Query: 404 QSLSCMKMQVSCLQMQGDALP-----------------------------ESSRELLSQI 434 QS + + +Q+ + A + L++ Sbjct: 1028 QSFTGISLQLEAAKGLIHAASTSKILNDIPDKFELSLTSKTEVLDATAGLSEAEVYLNRA 1087 Query: 435 RNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPS 493 + R + R L L AL+ + +E + + P +P Sbjct: 1088 GKLARQGLLEARRSVRALRAQALETDTLPKALKTAIQEMTLDSAMQAEFTLIGTPYDLPE 1147 Query: 494 HQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS-NHYG 552 ++L+I +EAL+NAL+H+QA +T+ ++++L + D+G G + +G Sbjct: 1148 DIQTNILRIGQEALTNALRHAQAQHFSLTLQFEPHRIQLRIADDGQGCEIEPFSNLESFG 1207 Query: 553 MIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFT 590 +I MR+R G+ GT + + + T Sbjct: 1208 LIGMRERVLYFDGEFTFDSAPGKGTVINIVIPVHRAGT 1245 >UniRef50_A9AW12 Multi-sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AW12_HERA2 Length = 584 Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 75/415 (18%), Positives = 150/415 (36%), Gaps = 40/415 (9%) Query: 212 LGTALNNMSAELAESYAVLEQR-VQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSP 270 L + L+ S+E+ + + +R V E + L++ +L + L Sbjct: 170 LVSTLSGQSSEINREHVIAARRDVDSAQRDAEAYRDRMRALYEVAYKLSTTMNFQTVLDA 229 Query: 271 VLNGLQNL-------------------------TLLRDIELRVYDTDDEENHQEFTCQPD 305 + L D+ LR+ Sbjct: 230 TVTESIRLINGRSSVVLLPTGEPDELYVAAGVGVGSGDLNLRIAIEPTGIMASILASGTP 289 Query: 306 MTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTL 365 +D V + + L+ YGI++ + + ++ D+ +V L Sbjct: 290 RILNDLRQSHALSSVPSMQNCACVCCVPLSAGRRNYGIVVVGVDRNE-INEDELGMVSAL 348 Query: 366 VEQLTATLALDRHQ-----ERQQQLIVMEE-RATIARELHDSIAQSLSCMKMQVSCLQMQ 419 + + ER + + EE R +AR+LHD AQS++ + M + ++ Sbjct: 349 ANYAIIAMLNAQLVGELRDERTKLISKEEEVRQQLARDLHDGPAQSVAAITMNIEFVKRL 408 Query: 420 GDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGF 478 + P + L+++ + +R LL R L GL L + Sbjct: 409 LEREPSRVMQELTKMGELARRTTYDIRTLLFELRPLTLDSQGLVATLREYVTRFKDGT-T 467 Query: 479 PVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNG 538 V L+ + + + + L I +EA +NA+KH+QA + + + + +++ TVQD+G Sbjct: 468 QVILEETVGELRLDAKREGTLFNIIQEASNNAMKHAQAKHIWIRLTRQGDELMATVQDDG 527 Query: 539 CGVPENAIR-----SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 G A+R +G++ + +RA+ + G + GT V V + + Sbjct: 528 KGFDLQAVRANYSKRGSFGLLNIDERARMVGGSAEMTSAVGAGTTVRVIVPLDAS 582 >UniRef50_Q2SUK5 Two-component hybrid sensor and regulator n=33 Tax=Burkholderiaceae RepID=Q2SUK5_BURTA Length = 740 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 63/250 (25%), Positives = 119/250 (47%), Gaps = 12/250 (4%) Query: 349 PQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLI------VMEERATIARELHDSI 402 + L +L +VE+ A AL R +E +++ +ER IARELHD + Sbjct: 484 ERTSELQTANDELRREIVERERAEEALARSREELREIAAISSTAREQERGRIARELHDEL 543 Query: 403 AQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGL 461 AQ+L+ +++ + + G+ +++R L+ + A R + + R L + GL Sbjct: 544 AQTLAMLRLDLERVSTTGN----ELAGRFTEMRGLLDGAVAATRRIASDLRPLMLDDLGL 599 Query: 462 RPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVV 521 PA++ + + + G L P + QA +I +E+L+N +H++AS V + Sbjct: 600 VPAIQWLVQAFQQRHGIGCTLIVDPPELDLVEPQASTTFRILQESLTNVGRHARASHVDI 659 Query: 522 TVAQNDNQVKLTVQDNGCGVPEN-AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVV 580 + +D +V L+V+DNG G + N +G++ +R+RA ++G V+ GT + Sbjct: 660 RLIADDREVMLSVRDNGVGFDTENPRKPNSFGLVGLRERAYLVQGTLSVQTAPGRGTAIE 719 Query: 581 VTFIPEKTFT 590 V + Sbjct: 720 VHIPLVRPHE 729 >UniRef50_A3NKQ6 Signal transduction histidine kinase n=29 Tax=Burkholderia RepID=A3NKQ6_BURP6 Length = 492 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 87/418 (20%), Positives = 154/418 (36%), Gaps = 29/418 (6%) Query: 177 RLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTAL------NNMSAELAESYAVL 230 +L L A+ Q + R E +L A+ + ++A LA S Sbjct: 86 LVLTGLDDLSVGLQAIQEG--AQDYLLKKRVETPLLSRAIRYAMERHRVAAALAASEERF 143 Query: 231 EQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYD 290 + V +AGL N ++ + L + G + D++ RV D Sbjct: 144 QLAVSGASAGLWDWNPKTGAMYLSPHFKKIMGYEDHELPDEITGHRESIHPDDLK-RVLD 202 Query: 291 TDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQ 350 T + + + RG L + + G ++ + Sbjct: 203 ALKAHLEHRDTYDVEYRVRTRS-----GDYRWIQSRGQALWNSAGEPYRMVGWIMDVTDR 257 Query: 351 GRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMK 410 R + L + R Q I EE+ IARELHD + Q L+ +K Sbjct: 258 KRDE------------DALRVSREELRRLSAHIQSIREEEKTRIARELHDDLGQQLTALK 305 Query: 411 MQVSCLQMQGDALPESSRE-LLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEAS 468 M V+ + + +SR L + + +R + R L + GL A+E Sbjct: 306 MAVTLVDNELKDAGWASRTSRLPNVYALIGQLLDSVRRIAADLRPVMLDDLGLMAAIEWL 365 Query: 469 CEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDN 528 E+ ++ PV + A + +I +EAL+N +HS+A+EV + + +++ Sbjct: 366 THEFVERYRIPVTSRIEADDIAFTRGSATEVFRIVQEALTNVARHSEATEVTLDIIRDEP 425 Query: 529 QVKLTVQDNGCGVPENAIRSNH-YGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 + + DNGCG + + H G++ MR+RA L G+ R+ G + T Sbjct: 426 NCIVRIADNGCGTARDTRPNRHSLGLLGMRERAARLGGEIRIDTAPGRGFALTATLPL 483 >UniRef50_B4CYV7 Histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYV7_9BACT Length = 694 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 84/373 (22%), Positives = 156/373 (41%), Gaps = 29/373 (7%) Query: 220 SAELAESYAVLEQRVQEKT-AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNL 278 L+ +Y +++ + H N+ + L R + R L Sbjct: 340 GQALSGAYEDALVQIEGTIVDRVRHLNEEILVLTSGGRIFDAVLDNPTR-PDALADFLPG 398 Query: 279 TLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSH 338 + +R + V + +E + + F D Q P LP L W L Sbjct: 399 SKVRANGVCVVEVGEERSPRAFRMLIRSPQDIALLQRPPWWTLP------RLLWSL--GG 450 Query: 339 TQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIAREL 398 L + V L ++ + R ++ Q+ +EERA +ARE Sbjct: 451 VSLATLAGWIW------------VAALGRRVRRQTEVIR--QKIQREGALEERARLAREF 496 Query: 399 HDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LT 457 HD++ Q + +++Q+ ++ + P + E L R+ + S + R + R L Sbjct: 497 HDTLEQQFTGIRLQLEAVKSKFGEAPAEAEEYLDVARSLMRHSHDEARRTVWDLRADVLE 556 Query: 458 EPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQAS 517 + L ALE + + ++ PR +P HLL+I +EA++NA+KH++AS Sbjct: 557 QHDLSTALEKTVAGATNGTP-RARVAVSGQPRRLPGWMENHLLRIGQEAVTNAIKHARAS 615 Query: 518 EVVVTVAQNDNQVKLTVQDNGCGVPE---NAIRSNHYGMIIMRDRAQSLRGDCRVRRRES 574 EV + + + ++L V+D+GCG +A H+G++ M++RA+ +RG +V + Sbjct: 616 EVHIELDYRPDVLQLRVRDDGCGFDANDTSASDRGHFGLLGMKERAEKIRGRLQVLSTLA 675 Query: 575 GGTEVVVTFIPEK 587 GT + VT + Sbjct: 676 AGTMIEVTVPLDT 688 >UniRef50_B9TKD1 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TKD1_RICCO Length = 383 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 62/285 (21%), Positives = 118/285 (41%), Gaps = 6/285 (2%) Query: 299 EFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQ 358 ++ + + + +TL H + G + L G +++ Sbjct: 104 DYLSRLKGVMETGKPDQILLEWVMPDQSVSTLLLHAVAEHDEEGNTIGALVIGHNITE-- 161 Query: 359 QQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQM 418 + L + A + ++ ER IARE+HD + Q LS +++ +S L Sbjct: 162 ---LKASERHLEESRAQLQMLTYHREEAREGERKRIAREIHDELGQLLSVLRLGISTLDY 218 Query: 419 QGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGF 478 R +++ ++ + + L T R + E G+ ALE +E+S G Sbjct: 219 GYGDTNPDLRNKTAKMGAVVDQAIDMVHTLATRLRPAVLESGIALALEWLVQEFSKSTGI 278 Query: 479 PVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNG 538 +L +A+ + +I +E+L+N L+HSQA V + + Q+ +KL++ DNG Sbjct: 279 DCELSVPDEDIDFDKERALPVFRIVQESLTNILRHSQADHVEIELTQDQEHLKLSIHDNG 338 Query: 539 CGVPEN-AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVT 582 G + A + +G+I M +R L G + GTE+ + Sbjct: 339 QGFEVSKATKKGSFGIIGMHERILMLGGTLEISSSSEQGTEIRLE 383 >UniRef50_A9B5L1 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L1_HERA2 Length = 581 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 83/464 (17%), Positives = 172/464 (37%), Gaps = 14/464 (3%) Query: 139 SGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFT 198 DR+ + + + + + + L + + L++ ++ Sbjct: 123 LLIDRSASIGLAVLASLLVISLAWAKLQGYDLARQAPPSVFTRYPWLVSTVFWITLFWMV 182 Query: 199 QRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRL 258 + + +L + + LEQRVQ +TA L + L+ + L Sbjct: 183 ASMTWLLAGNLQRALQQSRAHAQDLEQLRSQLEQRVQAQTAELAQRTHRAEALYNISSAL 242 Query: 259 HSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPR 318 A + + L + L + + + + + E + Sbjct: 243 ALPADITQILPLIAEQAHQLLHVDYSWI-MLNHQCLAAYPEAAVHEPHLQFEPTQNTSVM 301 Query: 319 GVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRH 378 + T L + Q ++LA + + D + L + L +Q L R Sbjct: 302 SISSKFGEHTALVLPFQLENDQVQLILAGAAIAQT-NTDDRALAEGLRDQAVLALNNQRL 360 Query: 379 QERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNEL 438 + + ++EER +AR++HD++AQ L+ + +Q+ Q P S L+ Sbjct: 361 LAQVRDKAMLEERTRLARDIHDTLAQGLTGIVIQLGATQRALVYSPSESSTHLALASRMA 420 Query: 439 NASWAQLRELLTTFRLQLTEP-GLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAI 497 + A+ R + R L + L A++ + V + + H Sbjct: 421 REALAEARASVWNLRAPLLDANSLTKAIQELAAH-PMRSDLQVDVQIHGQVLRLDLHDET 479 Query: 498 HLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR-----SNHYG 552 LL+I +EAL+N +KHS+A V + + ++ V+L + DNG G + + +NH+G Sbjct: 480 ALLRITQEALANVVKHSKAEHVSIQLIYGNSSVELLIHDNGTGFDQAILTNQMQMTNHFG 539 Query: 553 MIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI---PEKTFTDVQ 593 +I +R+R + G ++ + G V V P+ +++ Sbjct: 540 LIGIRERVAQIGGSLQLSNQ--HGALVHVQIPYNLPQTALVEME 581 >UniRef50_C6P6J2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6J2_9PROT Length = 355 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 128/308 (41%), Gaps = 14/308 (4%) Query: 288 VYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLAT 347 + D D + + + + G + LA+ ++ +L +T Sbjct: 31 LQLESDINTFLHLIHPEDSPSFRESMEHSAQTMSFWSWEG---RVTLANGEMKWLVLGST 87 Query: 348 LPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQL------IVMEERATIARELHDS 401 G + + + L + + + L R Q++ ++ +ER IARE+HD Sbjct: 88 PQSGENGKIEWEGLAVNVTKAKLDEIELLRSQQQLREFSSHIQDAKEQERLRIAREVHDE 147 Query: 402 IAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPG 460 I L+ +KM ++ ++ + + + S I N + + R L + R L G Sbjct: 148 IGGLLTAIKMDLAWIKERLPKSKKILTDKTSAIENMVGKAMTAARNLAHSLRPGYLDSFG 207 Query: 461 LRPALEASCEEYSAKFGFPVKLDYQLPPRLVP---SHQAIHLLQIAREALSNALKHSQAS 517 + A+E E+ + G L + +I L +I +EAL+N +KHS+A+ Sbjct: 208 IVAAIEMEASEFEQRTGIKCLLAHNEEEDEELELHPDVSIALFRIFQEALTNIMKHSRAN 267 Query: 518 EVVVTVAQNDNQVKLTVQDNGCGVPENAI-RSNHYGMIIMRDRAQSLRGDCRVRRRESGG 576 +V V + + ++LT+ DNGCG ++A + +G+ +++R G+ + G Sbjct: 268 KVEVLIHNSQEHIELTISDNGCGFSQDARSKPRSFGLRGIQERVAHFGGEVSISSTPEQG 327 Query: 577 TEVVVTFI 584 T V V Sbjct: 328 TRVYVKIP 335 >UniRef50_B3U4S0 Response regulator receiver n=1 Tax=Candidatus Nitrospira defluvii RepID=B3U4S0_9BACT Length = 998 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 82/376 (21%), Positives = 152/376 (40%), Gaps = 17/376 (4%) Query: 220 SAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLT 279 + ++ + E R Q L ++ +R+ + + +L L Sbjct: 633 ATDITDRKRAEEARQQLAKDRLLLLESTGEGIYGIDRQ-GRCTFINSAAARMLGSLPEAF 691 Query: 280 LLRDIELRVYDT-DDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTT----LKWRL 334 L +D+ R++ + D + TC+ T + V D + + Sbjct: 692 LGQDMHERIHHSFPDSTTYPRATCRIQKTLEGGKGCKVDDEVYWRKDGTAFPVEYSSFPI 751 Query: 335 ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATI 394 + + G ++ L +Q QLT + R + + + EER I Sbjct: 752 IEDNQIIGAVVVFLDITERKRAEQ---------QLTLSHDQLRKLTARLESVREEERILI 802 Query: 395 ARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL 454 ARE+HD + Q+L+ +K+++ L Q + R+ L I ++ + ++ + T R Sbjct: 803 AREIHDELGQALTGVKLELCLLHDQIAEVSPMMRKKLESISTLVDGTIQSVQRIATELRP 862 Query: 455 Q-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKH 513 L + GL PA+E E+ A+ G LD L + + + +I +E L+N +H Sbjct: 863 VVLDQLGLIPAIEWQAHEFQARTGIQCTLDVYLRAVTLSHAGSTAMFRIFQEILTNVARH 922 Query: 514 SQASEVVVTVAQNDNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGDCRVRRR 572 +QAS V +T+ + + L V+DNG GV + G++ MR+RA L G+ Sbjct: 923 AQASVVHITLQEQAGSLVLDVRDNGRGVTDAELADPHSLGLVGMRERALLLGGETIFTGS 982 Query: 573 ESGGTEVVVTFIPEKT 588 GT V V ++ Sbjct: 983 PGTGTAVRVRIPLDQP 998 >UniRef50_C5AIA0 Multi-sensor signal transduction histidine kinase n=24 Tax=Burkholderia RepID=C5AIA0_BURGB Length = 769 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 132/319 (41%), Gaps = 16/319 (5%) Query: 289 YDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATL 348 D + + + G L + L + ++ I + Sbjct: 448 MDAIGAPLTRFIPQRFRHAHASHIARFGVTGQSERHLGSQRLLYGLRANGDEFPIEASIS 507 Query: 349 PQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQL------IVMEERATIARELHDSI 402 ++ + E++ A AL +E ++L + EE+ IARELHD + Sbjct: 508 QIHDGDGKLYTVMMRDVTERVQAENALKASREELRELSANLQRVREEEKTRIARELHDDL 567 Query: 403 AQSLSCMKMQVSCLQMQGDAL-----PESSRELLSQIRNELNASWAQLRELLTTFRL-QL 456 Q L+ +KM +S ++ + S E L ++R ++A+ A +R + R L Sbjct: 568 GQQLTALKMDLSAVEHRLLRDGTGEAHASVVEPLREMRRLIDATVASVRRIAADLRPVML 627 Query: 457 TEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQA 516 + GL PA+E +++ ++G V+ P+ A L +I +EAL+N +H++A Sbjct: 628 DDLGLVPAIEWLANDFTNRYGIEVERRIDPGDVRFPNATATALFRIVQEALTNVARHAEA 687 Query: 517 SEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN----HYGMIIMRDRAQSLRGDCRVRRR 572 S V +T+ D Q L + D+G G + R +G++ +R+RA L G R+ Sbjct: 688 SHVALTLGIEDRQCVLRIVDDGVGADQADGRRAPDDKSFGLLGIRERAHMLGGTVRMETA 747 Query: 573 ESGGTEVVVTFIPEKTFTD 591 + G + +T T Sbjct: 748 RNQGYALTITIPLPSTPDP 766 >UniRef50_C1XM57 Signal transduction histidine kinase, COG4585 n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XM57_MEIRU Length = 430 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 70/327 (21%), Positives = 137/327 (41%), Gaps = 7/327 (2%) Query: 260 SRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRG 319 S+ L ++ + L L + + +P + P+G Sbjct: 98 SQNYLPFLALGLIPVVARYWLPLWAVLLIVLGLGALSVWWAQREPLQITFEILLSPGPQG 157 Query: 320 VLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQ 379 T ++ + + I +A L G L + L+ + + + Sbjct: 158 NTSWSALPTPAEYP--NLSLAFFIFIAFLYSGYALFTLEL-LIREIRAREELERTRRELE 214 Query: 380 ERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELN 439 + +Q ++EER +ARE+HD++AQ + + +Q+ +M + S+ L Q R Sbjct: 215 QTSRQAGILEERQRLAREIHDTLAQGFASIVVQLEAAEMASEHE-ASATHYLEQARQAAR 273 Query: 440 ASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIH 498 ++ R ++ R + L L AL+ + + + G + PR + + Sbjct: 274 EGLSEARRMVWALRPEILENTSLPEALQRLLQRWQQESGVRTQFTLTGTPRPLHPELEVG 333 Query: 499 LLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRD 558 LL+IA+EAL+N KH++A +T++ D+ V + VQD+G G+ A + +G+ +MR+ Sbjct: 334 LLRIAQEALTNIRKHAKARHANLTLSYLDDLVLMDVQDDGVGL--QAPTTGGFGLRLMRE 391 Query: 559 RAQSLRGDCRVRRRESGGTEVVVTFIP 585 R +SL G + GT + V+ Sbjct: 392 RVESLGGQMTLESEPGMGTTLAVSLPL 418 >UniRef50_A7NRQ7 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NRQ7_ROSCS Length = 682 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 2/224 (0%) Query: 362 VDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD 421 ++ +L T A + +E Q ++ +EER +ARELHDS++Q+L + + Q Q + Sbjct: 458 LNRRTRELAQTSAELQLKETQVKMAALEERQRLARELHDSVSQALYGIALGARTAQTQLE 517 Query: 422 ALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPV 480 P E L I + A +++R L+ R L GL AL + A+ V Sbjct: 518 RDPARLGEPLEYILSLAEAGLSEMRALIFELRPESLQTEGLVAALTKQSDALRARHKLDV 577 Query: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG 540 + P + L +IA+EA+ N +H+ A+ V +++ D + L ++DNG G Sbjct: 578 VTRFD-PEPEISLEAKEALYRIAQEAMHNVARHAHATRVELSLLNADGALTLEIRDNGKG 636 Query: 541 VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 H G+ M +RA + G + R GT + VT Sbjct: 637 FDPAQPYPGHLGLKSMPERAAHIGGAFHIESRPGAGTVITVTVP 680 >UniRef50_B2J8J6 Multi-sensor signal transduction histidine kinase n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2J8J6_NOSP7 Length = 928 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 84/542 (15%), Positives = 192/542 (35%), Gaps = 30/542 (5%) Query: 62 AAVPLSEKDKPLIKEMEQTAFSAELTRAAER--DGQLAQLQGLQDYWRNELIPALMRAQN 119 +A+ L++ + ++E++ EL R+ D A+ +Q +L AL++++ Sbjct: 394 SALALAQGEWEKRIKIERSDELGELARSFNNMADQLQAKFSEMQ-----DLNKALLQSET 448 Query: 120 RETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLL 179 R D ++ + + + + + I L Sbjct: 449 RLKQFLDAVPVAISINDPYGEIYYNNRAVQKLISVDLLPSIKPEKIAEYYQIYLAETDYL 508 Query: 180 QPWRQLLAM-----------ASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYA 228 P +L M H + T + G + ++ + + Sbjct: 509 YPTDELPIMYSLVGKTVHIDNMEFRHPNKTIPIEVLSTPIFDESGKVIYALTVCIDITER 568 Query: 229 V-LEQRVQEKTAGLEHK--NQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIE 285 E+ + + + LE + + L + R + L E + L E Sbjct: 569 KKAEKILADYNSVLEQQVTQRTLELQREIAERKQAEVALLESETRF-----RLLAEATFE 623 Query: 286 LRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILL 345 TC + + + ++ + Sbjct: 624 AIAITEQGILLDTNQTCAEMFGYELSELLGMRVMDFTAPEYREQVMQKIRSGDEGIYETV 683 Query: 346 ATLPQGRHLSHDQQQLVDTLVEQ--LTATLALDRHQERQQQLIVMEERATIARELHDSIA 403 G + + V + + A + +++ ++ V+ ER +A+E+HD++A Sbjct: 684 CLRKDGSTFPAEIRARVMSYRGRTIRMAAIQDITSRKQAEEATVLAERNRLAQEIHDTLA 743 Query: 404 QSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPG-LR 462 Q+ + + + + + E +++L+ R+ ++ + R + R QL E G + Sbjct: 744 QAFTVVIVHLDTASRKLTTDIEVAQKLIKAGRDLAHSGLTEARRSIKALRSQLLEDGNIF 803 Query: 463 PALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT 522 AL + + + + +LL+I +EAL+NA K++QA E+ + Sbjct: 804 NALNRFATQMFSPSNTHIVCQLIGEIYPLSPDVENNLLRIGQEALTNAFKYAQAGEIQIE 863 Query: 523 VAQNDNQVKLTVQDNGCGVPENAIRS-NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 +A ++Q L ++D+G G ++ N +G+++M +RA+ + ++ GTEV V Sbjct: 864 LAYQESQCSLRIKDDGQGFDIASVSVINSFGLLVMSERAECIGAKLTIQSSPGQGTEVSV 923 Query: 582 TF 583 Sbjct: 924 LV 925 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 36/270 (13%), Positives = 89/270 (32%), Gaps = 20/270 (7%) Query: 137 LVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRD 196 +V + I V+ + ++ V + + + +P L A A++ + Sbjct: 343 VVVVPENDFMEEINANTRTTIVLCIVALIVAVAVGVLILRWIAEPVLALKKSALALAQGE 402 Query: 197 FTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANR 256 + +R I +E+ L + NNM+ +L ++ ++ + A L+ + ++ FL Sbjct: 403 WEKRIKIERSDELGELARSFNNMADQLQAKFSEMQDLNK---ALLQSETRLKQFLDAVPV 459 Query: 257 RLHSRAPLCERL-----------SPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPD 305 + P E +L ++ + ++ + +TD E Sbjct: 460 AISINDPYGEIYYNNRAVQKLISVDLLPSIKPEKIAEYYQIYLAETDYLYPTDELPIMYS 519 Query: 306 MTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILL------ATLPQGRHLSHDQQ 359 + L + D + L + + D Sbjct: 520 LVGKTVHIDNMEFRHPNKTIPIEVLSTPIFDESGKVIYALTVCIDITERKKAEKILADYN 579 Query: 360 QLVDTLVEQLTATLALDRHQERQQQLIVME 389 +++ V Q T L + + +Q ++ ++E Sbjct: 580 SVLEQQVTQRTLELQREIAERKQAEVALLE 609 >UniRef50_Q0AF09 Multi-sensor signal transduction histidine kinase n=3 Tax=Nitrosomonas RepID=Q0AF09_NITEC Length = 498 Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 115/257 (44%), Gaps = 7/257 (2%) Query: 335 ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQL------IVM 388 D+ ++ L AT + + ++ + L + R + + ++L Sbjct: 227 GDADVKWISLRATPRRTPRGAVLWDGIMLNITRNKQIELEIARSRAQLEELSAYSQKAKE 286 Query: 389 EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLREL 448 +ER IARE+HD I +L+ +K ++ PE R + + + ++ R + Sbjct: 287 QERTRIAREIHDDIGGTLTAIKCELVPCLDNSSRAPEFYRNKAAAVESLVDMVIDSTRRI 346 Query: 449 LTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS 508 R + + G+ A++ E++ + G + + A+ + ++ +EAL+ Sbjct: 347 ALDLRPGVLDCGIVAAVQWQAREFNQRTGIACAVVCDDEEISLDGDLAVAIFRVFQEALT 406 Query: 509 NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVP-ENAIRSNHYGMIIMRDRAQSLRGDC 567 N KH+ ASEV V +++ +V L V DNGCG+ + + N +G+ MR+R Q L G Sbjct: 407 NIAKHADASEVRVKLSEASGEVYLEVADNGCGITYPDMEKVNSFGIRSMRERCQQLGGRF 466 Query: 568 RVRRRESGGTEVVVTFI 584 ++ GT V++ Sbjct: 467 HIQGEPQTGTGVMIWIP 483 >UniRef50_D2BHE9 Sensor histidine kinase n=5 Tax=Dehalococcoides RepID=D2BHE9_DEHSV Length = 381 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 6/238 (2%) Query: 362 VDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGD 421 ++T +L R +Q + +ER IA+ELHD AQ L + + Q Sbjct: 143 METAQRELQRMQQNLRFYLKQITIAQEDERRRIAQELHDDTAQDLIVISRAIDRFVTQNP 202 Query: 422 ALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPV 480 L E + L +++N +N + +++R R L + GL PALE + S FG + Sbjct: 203 NLGEDNLAELEELQNHVNRTLSEVRRFAQDLRPSVLDDLGLIPALEWLIPDLSKHFGINI 262 Query: 481 KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG 540 +D R + L +I +E+L N KH+QA++ V + + LT++DNG G Sbjct: 263 DIDVNGEIRRFAPETELVLFRIVQESLRNVGKHAQATKAWVYIDFGKYKATLTIKDNGRG 322 Query: 541 VPENAIRS-----NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQ 593 G+ M++RAQ + G ++ + GT V V D + Sbjct: 323 FLLPERVGDLAALGKLGLTGMQERAQLIGGRLSIQSKPEVGTMVTVAVPNSGNLEDNE 380 >UniRef50_B9XSJ3 Multi-sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XSJ3_9BACT Length = 795 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 7/233 (3%) Query: 368 QLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESS 427 +LT + R Q I EER I RE+HD + QSL+ KM ++ ++ + + Sbjct: 545 ELTKSREELRALAAHLQFIREEERKHITREIHDELGQSLTGFKMDLAWMRARLLGEDSKA 604 Query: 428 REL-----LSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVK 481 + + ++ + +R L T R L + GL A+E EY + G Sbjct: 605 SRQQLIDKIENMARLIDETANVVRRLCTELRPGVLDDLGLTAAIEWQIREYQNRTGIRCS 664 Query: 482 LDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV 541 + + V + ++ L +I +E ++N +H+QAS V V++ + +++ L V+DNG G+ Sbjct: 665 TEIESGDLGVDAERSTALFRIFQELMTNTARHAQASRVEVSLKRIGSEIVLEVRDNGRGI 724 Query: 542 PENAIRSN-HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQ 593 EN G++ MR+RA L G+ + + GT V V + Sbjct: 725 KENEKAGTKSLGLVGMRERALVLGGELEIAGKPGRGTMVRVRVPLAGRHQKTE 777 >UniRef50_A9WFK4 GAF domain protein n=3 Tax=Chloroflexus RepID=A9WFK4_CHLAA Length = 545 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 73/388 (18%), Positives = 136/388 (35%), Gaps = 38/388 (9%) Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ 298 E + L L++ + L L L+ + + + + D + E Sbjct: 157 RRAERDLRELHLLYEIGQSLAVNLDLASLLNDIKLRAPKVVGAERCSIFILDEETNELVL 216 Query: 299 EF---TCQPDMTCDDKGCQLC---------------PRGVLPVGDRGTTLK-----WRLA 335 E Q M D PR + + + Sbjct: 217 EIPGEQRQYRMPADRGIAGWVVTHGVGQIVNDVEHDPRWYDAISREADFVTRSIVCVPMR 276 Query: 336 DSHTQYGIL-LATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQ-----LIVME 389 G + L G+ + QL+ TL Q + R +R ++ L+ Sbjct: 277 VKDRVIGAMQLLNKANGQPFTDQDMQLLTTLAAQAAIAIENARLYQRLKEERDRLLLKEA 336 Query: 390 E-RATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLREL 448 E R IAR+LHD QS++ + M + ++ A+PE L + + + +R L Sbjct: 337 EVRHAIARDLHDGPTQSIAAIAMNIEFIKRLFKAMPERVPAELDTLAELVQKTTHDIRTL 396 Query: 449 LTTFRL-QLTEPGLRPALEASCEEYSAKFG--FPVKLDYQLPPRLVPSHQAIHLLQIARE 505 L R L GL L+ E + G ++L+ + + I +E Sbjct: 397 LFELRPLGLETQGLLATLQQYVERWRDPSGSDTKLRLEAPAQVPRLSPEVEAAVFIILQE 456 Query: 506 ALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR-----SNHYGMIIMRDRA 560 A++NA KH+ + + + + ++ +V+D G G A+ G++ M++RA Sbjct: 457 AVNNARKHAHSDTITIYLYVEEDHFVASVRDRGRGFNVAAVESGYVNRGSLGLLNMKERA 516 Query: 561 QSLRGDCRVRRRESGGTEVVVTFIPEKT 588 + + D R+R GT V + + Sbjct: 517 RLIGADLRIRSEIGQGTTVELRIPLSQA 544 >UniRef50_UPI0001693FB4 two-component sensor histidine kinase of nitrate reduction n=2 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693FB4 Length = 386 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 64/318 (20%), Positives = 123/318 (38%), Gaps = 15/318 (4%) Query: 269 SPVLNGLQNL-TLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRG 327 +P L L + I ++ + + + + PV + Sbjct: 75 NPAARQLLQLPEDAKKISYCSLCSNYPGLEKLCDYDSCYVATHQHEPVEVQIRTPVSESA 134 Query: 328 TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIV 387 + +G + R + ++++ + + + +T ++ Sbjct: 135 SVTVTTSEYEDPDHGPMFIL--GVRKVGDERKEEQEKIAKMITRSI----------LQAQ 182 Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRE 447 ER I+RELHD I Q L M + + ++ + + +S L ++ +R Sbjct: 183 ENERKRISRELHDGIGQQLYIMMIHLGMIKAEAEGQ-DSIINPLGELEESTRLLIQDVRH 241 Query: 448 LLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREA 506 L R L + GL AL ++YS KFG V Y+ P+ L +I +EA Sbjct: 242 LSAELRPSTLDDIGLVAALRNYIQDYSHKFGIQVHFAYEGSKERFPAPVETALYRICQEA 301 Query: 507 LSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGD 566 L NA K++Q + + + + +Q +L+VQD G G + G+ M +RA L G Sbjct: 302 LINAAKYAQTENIHILLDREPDQARLSVQDFGVGFELKPGTARGVGLYSMEERAGILGGS 361 Query: 567 CRVRRRESGGTEVVVTFI 584 + +++ GT++ V Sbjct: 362 VTITSQKTKGTKIEVRIP 379 >UniRef50_A9B7C8 GAF sensor signal transduction histidine kinase n=3 Tax=Chloroflexi (class) RepID=A9B7C8_HERA2 Length = 548 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 70/392 (17%), Positives = 141/392 (35%), Gaps = 41/392 (10%) Query: 242 EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENH---- 297 + ++ L+Q ++ + S L L ++ + + L + D +E + Sbjct: 155 RSELDEMNLLYQVSQSIASDIDLRSLLRTIIEKVTQIVDSESASLLLVDEVHKELYFETP 214 Query: 298 --------------------QEFTCQPDMTCDDKGCQLCPRGVLPV---GDRGTTLKWRL 334 T + DD + L + Sbjct: 215 SNNSQELRSYRMPMDQGFAGWVVTHGQGLIVDDPQNDARFYRQVDSDISHQTRNILTVPV 274 Query: 335 ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALD----RHQERQQQLIVMEE 390 G++ A + + + + L Q ++ + +E + +LI EE Sbjct: 275 RSRERTVGVIQAVNKRNGPFTEHDLRTLSMLANQAAISIENANLYTKLKEERDRLIRKEE 334 Query: 391 --RATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLREL 448 R I R+LHD QS++ + M + ++ A+PE + L+ + + ++ +LR L Sbjct: 335 EVRHQINRDLHDGPTQSVAAIAMNIEFIKKLMQAMPERVEDELNSLAALVKKTYQELRTL 394 Query: 449 LTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 L R L GL L ++ G V+ + A I +EA+ Sbjct: 395 LFELRPLGLETQGLVATLHEYANKFRDPSGMQVRFTPGNFIGRLAPQTAAATFMIIQEAV 454 Query: 508 SNALKHSQASEVVVTVAQNDNQ--VKLTVQDNGCGVPENA-----IRSNHYGMIIMRDRA 560 +NA KH++AS V + + Q+ + + V+D+G G + +G++ M +RA Sbjct: 455 NNARKHAKASMVWIELFQDSERQMLTAVVRDSGIGFDLKSITTSYEERGSFGLLNMGERA 514 Query: 561 QSLRGDCRVRRRESGGTEVVVTFIPEKTFTDV 592 G C +R GT++++ + Sbjct: 515 TLAGGACEIRSSAGEGTQIIIRVPTLVEEAED 546 >UniRef50_B4D830 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D830_9BACT Length = 725 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 67/313 (21%), Positives = 118/313 (37%), Gaps = 12/313 (3%) Query: 293 DEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGR 352 D D C+L LP + L + + A R Sbjct: 407 DHATLPPDLAANDKVRLTGICELTTTHPLPFASAVDGFRLHLQKENGISILQRAPWWTLR 466 Query: 353 HLSHDQQQLVDTLVEQLTATLALDRHQ---------ERQQQLIVMEERATIARELHDSIA 403 L + L AL R + + ++ ++ +ER IARELHD+I Sbjct: 467 RL-FWALGFIAGLALMAIVWAALLRRRVTEQTKTIATQIERAVIKDERQRIARELHDTIE 525 Query: 404 QSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLR 462 Q L+ + +Q+ + + +PE + + L + R + R L + GL Sbjct: 526 QELAGLSVQLRNARQRLLNMPEQAGTAIELAERMLRHCREEARTSIRDLRSVALEQRGLP 585 Query: 463 PALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT 522 ALE + G + + + R + IH+L+IA++A++NA++H+ E+ V Sbjct: 586 GALEETLAPLVEGSGARLSFEARGRARSLAGPVEIHILRIAQQAVANAVQHAAPKEIRVH 645 Query: 523 VAQNDNQVKLTVQDNGCGVPENA-IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 + + V L V+D+G G A H+G++ +R+RA + V GT + Sbjct: 646 LEYLADAVTLEVRDDGRGFDPAAPAPRGHFGILGIRERANKIHATLTVDSAPGAGTTIRA 705 Query: 582 TFIPEKTFTDVQG 594 G Sbjct: 706 VVPIAAVEMAWNG 718 >UniRef50_C6J152 Histidine kinase dimerization and phosphoacceptor region n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J152_9BACL Length = 360 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 106/248 (42%), Gaps = 2/248 (0%) Query: 349 PQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSC 408 L ++ + + + + E+ + ++EER +ARELHD+++Q L Sbjct: 106 RLAEQLERIGKRWEEQVSSLQRLSTHNAQLAEQARVSAIVEERQRLARELHDAVSQQLFA 165 Query: 409 MKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEA 467 + M + + + + ++ + I + + +++R LL R L L L Sbjct: 166 ISMTATAVGRTLEKDFDKAQRQVELIEEMASVAQSEMRALLLHLRPVYLEGKELSQGLSD 225 Query: 468 SCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQND 527 +E K + L+ + HL +I +EA+SN L+H++A ++ + + Sbjct: 226 LVKELKTKVPMDLTLEID-EDLNLGKGIENHLFRIIQEAMSNTLRHAKADKMEIRIHHRG 284 Query: 528 NQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEK 587 VK+T++DNG G + + YG+ M++R + G + GT + ++ Sbjct: 285 EAVKVTLRDNGIGFELDDKKQASYGLSTMQERIHEIGGSIQFITAPGKGTRIEISVPLIH 344 Query: 588 TFTDVQGD 595 + +G Sbjct: 345 EESGDEGS 352 Score = 44.2 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 22/175 (12%), Positives = 50/175 (28%), Gaps = 9/175 (5%) Query: 149 IETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNE 208 TV+ + + ++ +L R + L + T G +E Sbjct: 44 WRTVIQAGMTLLSLLLIIGAAFGFFLGYRPKRQIDGLREALLQWEKGNQTGSVPKLGEDE 103 Query: 209 MAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERL 268 + L L + E++V L N L+ + + + R L L Sbjct: 104 LGRLAEQLERIGKR-------WEEQVSS-LQRLSTHNAQLAEQARVSAIVEERQRLAREL 155 Query: 269 SPVLNGLQNLTLLRDIEL-RVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLP 322 ++ + + R + D ++ ++ +M + L Sbjct: 156 HDAVSQQLFAISMTATAVGRTLEKDFDKAQRQVELIEEMASVAQSEMRALLLHLR 210 >UniRef50_B5JKT1 Histidine kinase domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JKT1_9BACT Length = 729 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 65/351 (18%), Positives = 132/351 (37%), Gaps = 26/351 (7%) Query: 251 LWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDD 310 L + RL +RL + ++ + +L + ++++ ++ Sbjct: 385 LVELEARLAETRWYSDRLLLTFDWGESTI---EAQLHLQNSNEVPKDWLAGSIVRVS--- 438 Query: 311 KGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTL----- 365 C + P+G + L L+ P R + ++ Sbjct: 439 GICSVLADAPRPLGGLWVPRSFELLLRSPS--DLIVVQPPPRWTAERIAWILLAFLVIAV 496 Query: 366 ---------VEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCL 416 R + ++ ER +ARE+HD+++QSL + +Q+ + Sbjct: 497 IAVAVVMQASRYRLREQDHRRAMAETEFTAILNERNRVAREIHDTLSQSLGAISVQLELV 556 Query: 417 QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEP-GLRPALEASCEEYSAK 475 + + + + ++ LS + A+ R+ + R Q+ E L AL + Sbjct: 557 RTRANEMSAAALSHLSTAHELARGALAEARDSIWNMRSQVLERCDLSEALRRILTRLTDD 616 Query: 476 FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQ 535 G + + R +P +LL+I +EA++NA KH + S + V + +V L+V+ Sbjct: 617 TGVRFDIKVEGTKRRLPPVVENNLLRIGQEAITNACKHGKPSRIDVGLNFERRRVCLSVK 676 Query: 536 DNGCGVPENAI---RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 D+G G + +G++ +R+R L G V R G +VV Sbjct: 677 DDGVGFAIDEALNGSERSFGLVGLRERVDVLGGTIEVESRPGEGALIVVAV 727 >UniRef50_Q1AVR5 Periplasmic sensor signal transduction histidine kinase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVR5_RUBXD Length = 407 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 67/280 (23%), Positives = 115/280 (41%), Gaps = 10/280 (3%) Query: 306 MTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTL 365 + D RGVL ++ + W LA GI + R +H Q + L Sbjct: 132 LLFGDILWAHPQRGVLWALEQAASWSWPLAF---VIGICTLAVESMRRQAHAQ----ELL 184 Query: 366 VEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPE 425 E A L R+ ER ++L V EER IARE+HD++ L+ + +Q+ P Sbjct: 185 AELEEAHAELRRYAERARELAVSEERNRIAREIHDAVGHHLTVVNVQLEAAGKLLARDPG 244 Query: 426 SSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDY 484 + E +++ ++ + + ++ R + + + AL+ E+ G V + Sbjct: 245 RAAEAVARAKSSASEALSEARRAVRALKPPSMEGRAGLRALDDLVREFHG-SGVAVSFEV 303 Query: 485 QLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN 544 R +P L + +E L+NAL+HS A V V + V+L+V+D+G G Sbjct: 304 SGERRPLPPEVEFILYRALQEGLTNALRHSGADRVEVRLDLCGEAVRLSVRDDGRG-TSE 362 Query: 545 AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 +G+ +R+R G GG + V Sbjct: 363 GASGGGFGLEGLRERVAEAGGRISAGDARGGGFALEVELP 402 >UniRef50_B4UAL2 Integral membrane sensor signal transduction histidine kinase n=4 Tax=Anaeromyxobacter RepID=B4UAL2_ANASK Length = 662 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 115/295 (38%), Gaps = 8/295 (2%) Query: 303 QPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLV 362 + + + G VG G +L + + ++ + Sbjct: 355 AERIAGGELDWSIPDLGTDEVGRLGRSLDRMRLALRRLLDDVARVNAELEQRVEERTHAL 414 Query: 363 DTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA 422 + QL A R+ +ER IARELHD +QSL+ + M + Q Sbjct: 415 NEAYAQLAAREEARAQLLRKLISAQEDERKRIARELHDETSQSLAVLAMGLEAAQDAMRG 474 Query: 423 LPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVK 481 L +++ + + ++ R L + GL A+ E G V+ Sbjct: 475 GKAP---RLEEVKAVAVRTLEDVHRIILDLRPSVLDDLGLLSAIRWYAERQLGTRGMSVR 531 Query: 482 LDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV 541 ++ R +P L +I +EA+SN +H+QA+ V+V VA D+ ++ ++D+G G Sbjct: 532 CEFGELDRRLPPEMETALFRICQEAMSNIARHAQATAVLVEVALEDDVFRIDIEDDGRGF 591 Query: 542 PENAIR----SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDV 592 A+ +G++ +R+RA+ L G V GT V V + T+ Sbjct: 592 DAEAVARREGRRSWGLMGIRERAEILGGSATVESAPGKGTRVEVRIPVPRATTEP 646 >UniRef50_O07527 Sensor histidine kinase yhcY n=5 Tax=Bacillus RepID=YHCY_BACSU Length = 379 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 66/375 (17%), Positives = 134/375 (35%), Gaps = 39/375 (10%) Query: 246 QILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPD 305 + L L L+ + L VL L +LT L+ + + + D P Sbjct: 7 EKLKTLKTIAETLNQGHDIKATLDEVLKELLSLTNLQSGWIFLIEEDGSYTLAADAYLPP 66 Query: 306 MTCDDKGCQLCPRGVLPVGDRG-------------------------------TTLKWRL 334 + +C + L Sbjct: 67 ALSRKEKVLMCEGECYCLTKFNNGGLRKAANIMNCKRIESAENLHCFDTEGITHHATVPL 126 Query: 335 ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATI 394 D ++G+L ++ L++++ Q+ + R E QQ+ ++ ER + Sbjct: 127 EDGDRRFGLLNVAAAGKTMFDEEELHLLESVAFQIGTAIQRMRLSEYQQKNALLMERNRL 186 Query: 395 ARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL 454 A+ELHDS+ Q L + + + E+ ++++ I+N + A+++ L+ R Sbjct: 187 AQELHDSVNQMLFSVSLTAKAAKTL--TKDENLQQMIDFIQNLSQDALAEMKALIWQLRP 244 Query: 455 QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHS 514 E GL A+++ A G + + P + Q L ++ +EAL+N KH+ Sbjct: 245 GGLEKGLAEAIKSY----GALIGLKIIFTQKGCPV-LTDEQEHMLWRVVQEALNNCKKHA 299 Query: 515 QASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS-NHYGMIIMRDRAQSLRGDCRVRRRE 573 V++ + +L + D+G G A G+ M++RA+ + Sbjct: 300 GTDTAYVSLTASLCHAELDIIDHGAGFRYEAHAGLPSLGIKGMKERAEKAGAKFWIESAL 359 Query: 574 SGGTEVVVTFIPEKT 588 GT++ + + Sbjct: 360 GTGTKLSIRLPLKSR 374 >UniRef50_C8NE28 Sensor histidine kinase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NE28_9LACT Length = 355 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 4/217 (1%) Query: 380 ERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELN 439 E ++ ++ +ER IARELHDS++Q L M +S L + E ++ L+ I + L+ Sbjct: 142 EETKEQVIEQERRRIARELHDSVSQQLFAAMMMISALNERKQHFDEKEQKQLAMIEHVLS 201 Query: 440 ASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIH 498 + +++R LL R L L+ +E E + +K+ + + +P H Sbjct: 202 QAQSEMRALLLHLRPISLENKSLKSGIEGLLVEL--QTKVQMKIHWDIEDVTLPEGVEDH 259 Query: 499 LLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRD 558 L +IA+E LSN L+HS A + V + Q D+ V ++D+G G + I + YG+ M++ Sbjct: 260 LFRIAQELLSNTLRHSHAKHLEVYLRQKDSNVIFKIEDDGVGFNVDDIHTGSYGINNMKE 319 Query: 559 RAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGD 595 R Q L G ++ + GT + + + D Sbjct: 320 RVQGLGGQVKIVSFPNQGTTIEIKIP-LGRHLEGNYD 355 >UniRef50_UPI0001C314AD GAF sensor signal transduction histidine kinase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AD Length = 386 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 84/372 (22%), Positives = 137/372 (36%), Gaps = 37/372 (9%) Query: 247 ILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTC---- 302 L L R L + L L+ ++ + +T R + V D E + T Sbjct: 10 RLRRLIAVGRSLVQQLDLEALLAQIVAVAREVTGARYAAIGVLDEARAELERFLTRGIDE 69 Query: 303 -----------------------QPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHT 339 +P D + L + Sbjct: 70 ATRDLIGDPPRGHGILGVLIRDPRPVRLADLGDDPRSYGFPPHHPPMHSFLGVPIVVRGR 129 Query: 340 QYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQ----QLIVMEERATIA 395 +G L T +G + ++ L + + ERQ+ +ER A Sbjct: 130 AWGNLYLTDKEGGEFAAADEEAAVILADWAAVAIDNAGRFERQRLRDTMAAAEQERRRWA 189 Query: 396 RELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ 455 RELHD Q L +++ +S + + P + E+ +LR L+T R Sbjct: 190 RELHDETLQGLGGLQVLLSSALRR-SSEPSQVEGAVRAAVEEIGTEIEKLRTLITELRPA 248 Query: 456 -LTEPGLRPALEASCEEYSAKFGFPVKLDY---QLPPRLVPSHQAIHLLQIAREALSNAL 511 L E GL PALE+ +A G V + R +P + ++ +EAL+NA+ Sbjct: 249 ALDELGLEPALESLAGRVAAVEGIVVTSEVVLADGERRRLPPDLETAVYRLVQEALTNAV 308 Query: 512 KHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRR 571 KH++A V V V + D V+LTV+D+G G A R+ +G++ M +R G V+ Sbjct: 309 KHARAERVDVRVTERDGCVELTVRDDGAGFDVGAPRA-GFGLLGMEERVALAGGTLAVQS 367 Query: 572 RESGGTEVVVTF 583 R GT + T Sbjct: 368 RPGAGTTIRATL 379 >UniRef50_Q13H12 PAS/PAC sensor signal transduction histidine kinase n=5 Tax=Burkholderia RepID=Q13H12_BURXL Length = 384 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 70/332 (21%), Positives = 122/332 (36%), Gaps = 9/332 (2%) Query: 265 CERLSPVLNGLQNLTLLRDIELRV---YDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVL 321 + +L+ + R+ Y + H P+ + L Sbjct: 33 DDYAIYMLDMSGKVVNWNAGAQRMKGYYADEIIGQHFRVFHTPEDIAAGQPDSLLAAAAA 92 Query: 322 PVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATL-ALDRHQE 380 + R S + ++++ + ++ L EQ R Sbjct: 93 DGRVASQGWRVRKDGSKFRANVVVSAIRTASGELCGFAKVTQDLTEQNRLAEFEQLRRLA 152 Query: 381 RQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSR---ELLSQIRNE 437 Q EE+ IARELHD + Q L+ +KM ++ L+ + + + Sbjct: 153 THIQATREEEQIRIARELHDDLGQQLAALKMALADLETILRDNGAIAALTLTHTKDMHHL 212 Query: 438 LNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQA 496 ++ + A LR + R L GL PALE +++ ++ V Q V + Sbjct: 213 IDVTVASLRRIAAGLRPIVLETLGLVPALEWLIGDFTQRYHIDVNARIQTDDMNVSEAAS 272 Query: 497 IHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENA-IRSNHYGMII 555 L I +EAL+N +H+ A EV V +A+ L V+DNG G+ R +G++ Sbjct: 273 EALFHIIQEALTNVARHAHADEVTVELARGGRTCVLRVEDNGQGMASATLPRETSFGLLG 332 Query: 556 MRDRAQSLRGDCRVRRRESGGTEVVVTFIPEK 587 MR+R L G + G + +TF E Sbjct: 333 MRERVHRLNGSLSIDSTPGCGFRIAITFPLET 364 >UniRef50_A6WW19 Integral membrane sensor signal transduction histidine kinase n=46 Tax=Rhizobiales RepID=A6WW19_OCHA4 Length = 485 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 59/236 (25%), Positives = 110/236 (46%), Gaps = 6/236 (2%) Query: 365 LVEQLTATLALDRHQERQQQLI--VMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDA 422 L+ +A ++ +E Q++I EERA +ARELHD I+Q+L ++ + Q Sbjct: 249 LLNLRERRMADNKLKELAQRIIDTQEEERARLARELHDGISQNLVGVRYAIDLASRQVRM 308 Query: 423 LPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVK 481 + + + + LN + ++R L R + L + GL AL+A CE +S + G + Sbjct: 309 DSGGAPLAIEKASDALNGAIKEVRRLSHDLRPRILDDLGLTVALKALCEHFSERTGIETQ 368 Query: 482 LDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV 541 L+ + + L ++ +EAL+N +HS AS+V + + + +V +TV D+G G Sbjct: 369 LEASGLNETLKPEASTALYRVVQEALTNVERHSGASQVSIRLWGSGGKVTMTVADDGNGF 428 Query: 542 PENAIRS--NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGD 595 ++ + G+ M++R G V GT++ T + + Sbjct: 429 TARDLKDQLSGLGLRNMQERMAHFGGVLLVETGAD-GTQLTARLPKSATERKREPE 483 >UniRef50_C0Q8Z0 Two-component hybrid sensor and response regulator histidine kinase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q8Z0_DESAH Length = 708 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 3/268 (1%) Query: 314 QLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATL 373 R R + + + + L A + S D +Q V +L Sbjct: 431 CHGVRDDSDRVVRSLAVSVDVTEKNEVQTALEAATRKLSTYSMDLEQQVQKRTVELEKVQ 490 Query: 374 ALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQ 433 R ER +ARELHD + Q L+ +K+ ++ + + Sbjct: 491 DKLRKLSGSIMEAHEIERGALARELHDHLGQVLTALKIDAVWIERFLSPRDPDAAVRAGR 550 Query: 434 IRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVP 492 I + ++ + +R++ R L + GL ALE+ ++ + + Sbjct: 551 ISSLIDDTIGDVRKMAFRLRPGVLDDLGLVEALESLTGDFEERSDITCLFQAA-ALPDID 609 Query: 493 SHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN-HY 551 S A L +IA+EAL+NA++HS+AS V +T+A + ++ L ++DNG G + I N + Sbjct: 610 STLATALYRIAQEALTNAIRHSRASIVALTLAMDQGKLVLKIKDNGVGFAFDDINENQGF 669 Query: 552 GMIIMRDRAQSLRGDCRVRRRESGGTEV 579 G+ M++RA G + GT V Sbjct: 670 GLAGMQERATLAGGVLEIVSGPEQGTSV 697 >UniRef50_B4D5C3 Histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5C3_9BACT Length = 697 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 82/397 (20%), Positives = 149/397 (37%), Gaps = 35/397 (8%) Query: 190 SAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILS 249 V + +++ L + L A L ++ + K L Sbjct: 323 RRVGRGLPPKPIDVTA----GQLLEG--RLDRRLVRLQAQLVEQSRRKGEELLVMKAG-E 375 Query: 250 FLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCD 309 L+ RL L + + +LT + R+ + ++ Sbjct: 376 VLFN--ARLSPSDDGVSSL--ANDSILSLTGIC----RLQMGEHRPVLGDWPVS------ 421 Query: 310 DKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQL 369 +LP D +K + + LLA + + ++ V Sbjct: 422 ------AFELLLPSPDDVHVVKPPDWWTQQRAAWLLAVVTGLLVGAMCWVAMLRHRVRLQ 475 Query: 370 TATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRE 429 TA ++ +R + + ER IARELHD++ Q L+ + M + + L RE Sbjct: 476 TAIIS-----DRLRAEAALNERERIARELHDTVEQDLAAIGMHFEVITDRALELEPMVRE 530 Query: 430 LLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPP 488 ++ S A + + R L E GL PALE + + +A G + P Sbjct: 531 NFEAAVRQVRRSQADMHHAVWDLRSGTLVERGLGPALEEALQLSAAHCGAVPECKEYGPV 590 Query: 489 RLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS 548 R +P HLL+I +EA+SNA++H+ + + + + + + V+D+GCG A Sbjct: 591 RRLPGVIEHHLLRIGQEAMSNAVRHAAPKRISIALRYEGDTLTMRVEDDGCGFDVEARSQ 650 Query: 549 N--HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 N +G++ MR+R + + G V+ G+ V V Sbjct: 651 NTARFGLMGMRERVERIGGRLSVQSTPGTGSVVEVVL 687 >UniRef50_Q67QY8 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY8_SYMTH Length = 346 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 67/322 (20%), Positives = 110/322 (34%), Gaps = 10/322 (3%) Query: 271 VLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTL 330 V N + L + + H + + L L Sbjct: 19 VANAAIAVIGATCAVLIATHFWNSQEHAPIW-EFGLIAVGLVVSLGVNYALLRVAFRPLF 77 Query: 331 KWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEE 390 + G A +P D ++ + L + Q EE Sbjct: 78 TLHATLDRVRRGDFSARVPMV-PGDPDIARVSEMANLMLDRLAEHRQAVAAQILRAQEEE 136 Query: 391 RATIARELHDSIAQSLSCMKMQVSCLQMQG--DALPESSRELLSQIRNELNASWAQLREL 448 R IARELHD AQSL+ + + + ++ Q + E+ E L + + + R L Sbjct: 137 RKRIARELHDETAQSLTSIVVNLEAIERQAVGSGVDEALCERLHLTKEVAQRTLDETRRL 196 Query: 449 LTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 + R L + GL PAL G +P L +I +EA+ Sbjct: 197 MMDLRPSVLDDLGLVPALRWFINHRVLPAGLEADFQVSGLTERLPEELETALFRIMQEAI 256 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPE-----NAIRSNHYGMIIMRDRAQS 562 +N +KH++A V+V + + ++ V D+G G +R G+ M++RA Sbjct: 257 TNVVKHAKAKTVLVRLHREHGEITGLVVDDGQGFHVVHTVGQPVRDRGLGLFGMQERAAL 316 Query: 563 LRGDCRVRRRESGGTEVVVTFI 584 + G V GT V VT Sbjct: 317 VGGKVVVESAPGRGTTVRVTVP 338 Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 62/232 (26%), Gaps = 6/232 (2%) Query: 157 RVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRAN-ISGRNEMAMLGTA 215 + ++ + L +P L A V DF+ R + G ++A + Sbjct: 51 FGLIAVGLVVSLGVNYALLRVAFRPLFTLHATLDRVRRGDFSARVPMVPGDPDIARVSEM 110 Query: 216 LNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQ-ANRRLHSRAPLCERLSPVLNG 274 N M LAE + ++ E + +I L + L S E + G Sbjct: 111 ANLMLDRLAEHRQAVAAQILRAQE--EERKRIARELHDETAQSLTSIVVNLEAIERQAVG 168 Query: 275 LQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRL 334 + L + + E L L L L Sbjct: 169 -SGVDEALCERLHLTKEVAQRTLDETRRLMMDLRPSVLDDLGLVPALRWFINHRVLPAGL 227 Query: 335 ADSHTQYGILL-ATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQL 385 G+ L Q+ + +V+ A L R ++ Sbjct: 228 EADFQVSGLTERLPEELETALFRIMQEAITNVVKHAKAKTVLVRLHREHGEI 279 >UniRef50_UPI0001C312DE integral membrane sensor signal transduction histidine kinase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312DE Length = 468 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 5/239 (2%) Query: 347 TLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSL 406 R L+ ++L TL E + E+ + V+EER +ARE+HD++AQ L Sbjct: 183 RREALRELAETNRRLEATLAENAALQ---AQLVEQARDAGVVEERQRMAREIHDTLAQGL 239 Query: 407 SCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPAL 465 + + + Q PE R L S A+ R + R L L A+ Sbjct: 240 TGI-VAQIQAAEQAAERPERWRRHLRTAAQLARESLAEARRSVQAVRPEALENARLPEAV 298 Query: 466 EASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ 525 +S+ G V++ PR +P+ + LL+ A+EAL+N KH++A V VT++ Sbjct: 299 AEVARRWSSIQGVGVEVTTTGHPRPLPTEVEVTLLRTAQEALANVAKHARAGRVGVTLSY 358 Query: 526 NDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 ++ V L V+D+G G A + G++ MR R + L G + GGT + + Sbjct: 359 MEDAVTLDVRDDGVGFAVGAAAGDGVGLVAMRQRVEGLGGRLEIESEPGGGTAISASAP 417 >UniRef50_Q1D524 Sensor histidine kinase n=2 Tax=Cystobacterineae RepID=Q1D524_MYXXD Length = 427 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 5/222 (2%) Query: 367 EQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPES 426 + A + Q ++L V+EER +ARE+HD + SLS M +Q + E Sbjct: 211 REAAAHREVVSLQGDLKELAVVEERNRMAREIHDGLGASLSSMIIQSEYILNLARE--EG 268 Query: 427 SRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQL 486 RE + +++ S +LR L R + L LE + + + G ++ + Sbjct: 269 LREEIRELKLTAEESIEELRRSLRMMR---EDFELAQGLEDYAKTFRERTGLDIRFERTG 325 Query: 487 PPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI 546 R + + L +I +E+LSNA+KH++A V V + ++++V L V+D+G G + Sbjct: 326 LQRKLDPDVQLALFRILQESLSNAVKHAEAKGVQVRLDFSEDRVNLVVRDDGKGFDPSRT 385 Query: 547 RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 HYG++ MR+RA L G V G +V + + Sbjct: 386 PRGHYGLLNMRERAMKLGGQLIVDSSPGAGAQVAFSLPCRPS 427 >UniRef50_UPI0001B54FA0 histidine kinase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B54FA0 Length = 423 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 7/245 (2%) Query: 347 TLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSL 406 L+ +L L E + + +Q V++ER +ARE+HD++AQ L Sbjct: 183 RRRTNEKLAQTNARLETALTENAALH---AQLLTQARQAGVLDERQRMAREIHDTVAQGL 239 Query: 407 SCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPAL 465 + + Q+ +A + L+ + S + R + R L + L AL Sbjct: 240 TGIVTQLQAADRATEA--ADRQRHLAHVHTLAKDSLTEARRAVQALRPEPLADSHLPEAL 297 Query: 466 EASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ 525 S G V D + R + + L ++A+EAL+NA KH++A+ + +T+ Sbjct: 298 AGLANRVSDTSGTKVTADVEGDARPLLPELEVTLYRVAQEALANAEKHARANRIGITLTY 357 Query: 526 NDNQVKLTVQDNGCGVPE-NAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 + + L ++D+G G + +G+ MR R Q + G + GT V Sbjct: 358 TSDLIMLDIRDDGRGFAPGDRGDGTGFGLEAMRQRVQRVAGSLTIESARGEGTVVHAECP 417 Query: 585 PEKTF 589 Sbjct: 418 AIPPP 422 >UniRef50_Q67L27 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67L27_SYMTH Length = 536 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 76/388 (19%), Positives = 139/388 (35%), Gaps = 29/388 (7%) Query: 239 AGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQ 298 + + Q + L R + S +RL +L L L + D EE Sbjct: 146 REAQRRRQQIEGLAAMAREIGSLREQPQRLGGLLERACRLLDLDLAAWGMLDEYREELVW 205 Query: 299 EFTCQPDM----------------------TCDDKGCQLCPRGVLPVGDRGTTLKWRLAD 336 P P L + Sbjct: 206 NAAHGPGADLLLGPLRTVGDSPLVRTLMTGRIYRYPGAGRPDPHLAPLPLRSFTAIPYRL 265 Query: 337 SHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIAR 396 G+LL + L D +L + L L+ + Q L V+EER +A Sbjct: 266 GPRSQGVLLGASRRPGALVDDDLRLFNHLGAYLSTAAENAQLLRDMQHLAVLEERQRLAG 325 Query: 397 ELHDSIAQSLSCMKMQVSCLQMQGDALP-ESSRELLSQIRNELNASWAQLRELLTTFRLQ 455 E+HD I Q L+ + M++ ++ ++ E ++ +R + ++ ++R L R Sbjct: 326 EIHDHIGQVLTFLGMRLHVVERALAQDDLATAAEEVAGLRGVVASAHEEIRASLYDLRND 385 Query: 456 LTEPG-LRPALEASCEEYSAKFGFPVKLDYQLPP-RLVPSHQAIHLLQIAREALSNALKH 513 L + ++A+ G V+++ P ++P L +I +EAL+NA +H Sbjct: 386 APARSPLMDRWRQLLDAFAARTGIAVRIETPHRPMLVLPPTTEAQLTRILQEALANAQQH 445 Query: 514 SQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR-SNHYGMIIMRDRAQSLRGDCRVRRR 572 S AS V V + +T+ D+GCG + +H+G+ +MR+RAQ++ + Sbjct: 446 SGASTVTVQARVERATLYITIADDGCGFDPSVPPDPHHFGLALMRERAQAIGARLHIESA 505 Query: 573 ESGGTEVVVTFIPEKT---FTDVQGDTH 597 GT + + + + H Sbjct: 506 RGRGTRISLEMPLPPRKEMEHEQEPPAH 533 >UniRef50_UPI0001B54039 histidine kinase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B54039 Length = 443 Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 101/258 (39%), Gaps = 10/258 (3%) Query: 346 ATLPQGRHLSHDQQQLVDTLVEQLTATLALDR-HQERQQQLIVMEERATIARELHDSIAQ 404 A + ++++++D L L R + ++ V++ER +++E+HD++AQ Sbjct: 185 AVFAAVGRQNAERKRMLDQLAAAEAENRGLQRQLLAQAREAGVLDERQRLSQEIHDTLAQ 244 Query: 405 SLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRP 463 + + Q+ Q L+ + R + R L L Sbjct: 245 GFTGIITQLEAAA-QARDDTAEWERHLAAATQLARENLTAARRSVAALRPEPLEAATLPE 303 Query: 464 ALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTV 523 AL +S + G P + + LL+I +EALSN KH++AS +T+ Sbjct: 304 ALAEVARLWSERTGVPAEFSTTGTAVPLHPELEATLLRITQEALSNVAKHARASRAGITL 363 Query: 524 AQNDNQVKLTVQDNGCGVP-----ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTE 578 + ++V L +D+G G +G+ MR RA+ L G V GGT Sbjct: 364 SYMGDEVTLDARDDGVGFDPAHPPAPPSAEGGHGLPGMRRRAERLAGALHVESEPGGGTA 423 Query: 579 VVVTFI--PEKTFTDVQG 594 V P T +G Sbjct: 424 VSARLPAIPAATLDPTEG 441 >UniRef50_A4XZI6 Multi-sensor signal transduction histidine kinase n=17 Tax=Pseudomonas RepID=A4XZI6_PSEMY Length = 801 Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 53/216 (24%), Positives = 103/216 (47%), Gaps = 1/216 (0%) Query: 369 LTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSR 428 L + A R + + EE+A IARE+HD + Q L+ +K++ + ++ Sbjct: 578 LADSRARLRELSAHLESVREEEKARIAREVHDELGQVLTVLKLETAMCELACAGQVPELD 637 Query: 429 ELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPP 488 E L+ ++ + + +R++ T R + + G+ A+E + + P ++ Sbjct: 638 ERLASMKRLIAQLFQLVRDVATALRPPILDAGIASAIEWQVRRFEERTQIPCLVEVPEHL 697 Query: 489 RLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS 548 +P QAI L +I +EAL+N ++H+ A VVV + Q + + L+V D+G G + Sbjct: 698 PRLPDAQAIGLFRILQEALTNVMRHAGAHSVVVRLWQEEGGLCLSVSDDGKGFDAAMRKP 757 Query: 549 N-HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 +G++ M++R L G ++ R GT + Sbjct: 758 GQSFGLVGMQERMLMLGGQLQIDSRPGEGTTLYARI 793 >UniRef50_A1AUQ4 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUQ4_PELPD Length = 489 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 70/313 (22%), Positives = 132/313 (42%), Gaps = 7/313 (2%) Query: 279 TLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSH 338 +I R E + ++ + V G + + S Sbjct: 182 LPREEIIGRHQTVLHPPEMAEHFAAQFRRTVAQHREVDNAEAIVVSKSGRRIPVHIKHSV 241 Query: 339 TQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIAREL 398 T+ G + R +S + EQL R Q + ER +AR++ Sbjct: 242 TRVGEMSIMQGLFRDISERVRA-----EEQLVELNQKLRALSDHLQTVQERERLAMARDI 296 Query: 399 HDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTE 458 HD I QSL+ +K+ + + + A + +E ++++R + + ++ + R L + Sbjct: 297 HDEIGQSLTVLKLDLEWIAHRLPAKESAVQERVNEMRWNIEQLTSAVQRIAADLRPPLLD 356 Query: 459 -PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQAS 517 GL A++ E+S + G + + A +++I +E L+N L+H++A+ Sbjct: 357 SLGLAAAIDWHVAEFSRRSGIECFVMLNEEVDPLEPQLATAVMRIVQEGLTNVLRHARAT 416 Query: 518 EVVVTVAQNDNQVKLTVQDNGCGVPENAIR-SNHYGMIIMRDRAQSLRGDCRVRRRESGG 576 EV V++ + D Q+ L + DNG G+ I YG++ M++RA+ RG+ V E GG Sbjct: 417 EVSVSLCKRDGQLVLEIGDNGRGIRPEEIESPQAYGLMGMQERARICRGELTVGGAEGGG 476 Query: 577 TEVVVTFIPEKTF 589 T + VT + Sbjct: 477 TLLRVTVPLQSGE 489 >UniRef50_D1VK31 Histidine kinase n=1 Tax=Frankia sp. EuI1c RepID=D1VK31_9ACTO Length = 459 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 59/243 (24%), Positives = 104/243 (42%), Gaps = 6/243 (2%) Query: 352 RHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKM 411 L+ +QL ++ E + + ++ V EER +A E+HD++AQ L+ + Sbjct: 203 AELAETNRQLQASMDENAGLH---AQLLTQAREAGVAEERGRLAGEIHDTLAQGLAGILT 259 Query: 412 QVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCE 470 Q+ + A P + A+ + R + R QL + L AL Sbjct: 260 QLEAARRA-HADPAEWSRHIELADGLARANLTEARRSVRALRPEQLEQASLSDALADLAR 318 Query: 471 EYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQV 530 ++S + P + P P+ + + +IA+EAL+N +H+ A+ VT++ D+ + Sbjct: 319 DWSRRTQVPAEAVTTGVPVRAPAETEMAVFRIAQEALANVARHAHATRARVTLSYLDDTL 378 Query: 531 KLTVQDNGCGVPENA-IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTF 589 L V D+G G A +G+ MR RA+S+ G + GT V F T Sbjct: 379 LLDVADDGAGFHPGAGAPPARFGVTGMRRRAESVAGTLSIESAPGDGTTVNAVFPLTPTP 438 Query: 590 TDV 592 + Sbjct: 439 AEA 441 >UniRef50_A9WAP8 ATP-binding region ATPase domain protein n=3 Tax=Chloroflexus RepID=A9WAP8_CHLAA Length = 491 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 103/252 (40%), Gaps = 8/252 (3%) Query: 346 ATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQER---QQQLIVMEERATIARELHDSI 402 + L+ + + L + + + + Q EER IARELHDS Sbjct: 234 WANDEIGQLTDAFNAMSEALAQAERERAEREHLRAQYVTQIITAQEEERKRIARELHDST 293 Query: 403 AQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGL 461 +Q+L+ + + + L + + + + +R+ + L L R L + GL Sbjct: 294 SQALTSLLVGLRSLADRHRS--PEIAQQVDDLRSIVGQILNDLHALARQLRPSVLDDLGL 351 Query: 462 RPALEASCEEYSAKFGFPVKLDYQL-PPRLVPSHQAIHLLQIAREALSNALKHSQASEVV 520 AL+ E A+ G + L + L +I +E L+N ++H+ AS Sbjct: 352 AAALQRYVAECRARSGLIIDLALPGLDDFRLDPVVETALYRIVQEGLTNIIRHAHASTAS 411 Query: 521 VTVAQNDNQVKLTVQDNGCGVPENAIRS-NHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 V + + ++V+ ++D+GCG NA+ H G+ +R+RA L G + GT + Sbjct: 412 VVIERRADRVRAIIEDDGCGFDPNALHGDGHLGLNGIRERAALLNGQLIIESSPGSGTTL 471 Query: 580 VVTFIPEKTFTD 591 V + Sbjct: 472 YVEIPLTTRHEE 483 Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 111/340 (32%), Gaps = 11/340 (3%) Query: 58 YRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQD-YWRNELIPALMR 116 YRL + ++++ P ++ + G L+ + L+ Sbjct: 86 YRLFRLLQDTQENNPDLRYAFIIDSEGTIVAHTFGSGFPVGLRDANTVTAQEHHRSVLLA 145 Query: 117 AQNRETVSADVSQFVAGLD-QLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLR 175 + V F V E + V + + A + + +L Sbjct: 146 TNEGDIWDTAVPMFDGRAGIARVGLSLAAREQTVAAVTGQLLITTIMAAAIGITAAAFLT 205 Query: 176 ARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQ 235 L +P QL+A+ AV+ DF+QRA +E+ L A N MS LA++ +R Sbjct: 206 WLLTRPILQLVALTKAVALGDFSQRARRWANDEIGQLTDAFNAMSEALAQAERERAEREH 265 Query: 236 EK--------TAGLEHKNQILSFLWQA-NRRLHSRAPLCERLSPVLNGLQNLTLLRDIEL 286 + TA E + +I L + ++ L S L+ + + D+ Sbjct: 266 LRAQYVTQIITAQEEERKRIARELHDSTSQALTSLLVGLRSLADRHRSPEIAQQVDDLRS 325 Query: 287 RVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLA 346 V ++ + +P + D R V R + + + Sbjct: 326 IVGQILNDLHALARQLRPSVLDDLGLAAALQRYVAECRARSGLIIDLALPGLDDFRLDPV 385 Query: 347 TLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLI 386 + + + TA++ ++R +R + +I Sbjct: 386 VETALYRIVQEGLTNIIRHAHASTASVVIERRADRVRAII 425 >UniRef50_Q74GJ3 Sensory box histidine kinase n=1 Tax=Geobacter sulfurreducens RepID=Q74GJ3_GEOSL Length = 830 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 95/422 (22%), Positives = 158/422 (37%), Gaps = 59/422 (13%) Query: 221 AELAESYAVLEQRVQEKTAGLEHKNQIL-SFLWQANRRLHSRAPLCERLSPVLNGL---- 275 A L E+ LE RV+E+TA LE N+ L + ++ S R ++ Sbjct: 405 AALREAKEQLELRVRERTADLEQANRALQEEVAARSQAEESLRASESRFRRLVQMAPLPL 464 Query: 276 --------QNLTLLRDIELRVYDTDDEENHQEFTC----------------QPDMTCDDK 311 R L Y +D +E+ Q + Sbjct: 465 CFADASGTLRYVNDRFTRLFGYAPEDIPTQEEWWSRVCTDGRCRGETADAWQASVQRGPN 524 Query: 312 GCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATL------PQGRHLSHDQQQLVDTL 365 G V + ++ T G +LAT H ++L++ L Sbjct: 525 GASDIEPAEFRVACKNGDIRLVEVSGITIEGTVLATFIDITERRLAEDELHRHRELLEEL 584 Query: 366 VEQLTATLALD----------RHQERQ------QQLIVMEE--RATIARELHDSIAQSLS 407 V Q TA L L R + ++L MEE R +A ELHD I + L+ Sbjct: 585 VHQRTAELKLRNMELASEIAERRRAEAALRCYTRRLTEMEEDLRKKLAAELHDEIGRDLT 644 Query: 408 CMKMQVSCLQMQGDALPES-SRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPAL 465 + + S + + P+ + + + +R L R L + GL AL Sbjct: 645 ALNLNFSVIGNRLVQGPDGCLKARIEDTERLIEDISRTVRGLTAKLRPPVLDDYGLPAAL 704 Query: 466 EASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQ 525 + +S + G V + +P+ + I L +I +EAL+N KH+ A V V++ Sbjct: 705 RWHADLFSRRTGIEVTVRGADSVPRMPAEKEIALFRIVQEALTNCSKHANAGNVKVSLDH 764 Query: 526 NDNQVKLTVQDNGCGVPENAIR----SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 D +V+L+V D+G G + + +G+ IMR+RA+ + G R+ GT + V Sbjct: 765 GDGRVRLSVVDDGIGFAPESASPTPAGSGWGLTIMRERAELIGGTFRLNTAPGKGTVLTV 824 Query: 582 TF 583 Sbjct: 825 EI 826 >UniRef50_B0TH54 Sensor histidine kinase, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH54_HELMI Length = 382 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 70/374 (18%), Positives = 154/374 (41%), Gaps = 17/374 (4%) Query: 228 AVLEQRVQEKTAGLEHKNQILSFLWQ-----ANRRLHSRAPLCERLSPVLNGLQNLTLLR 282 + L++ V++ +E+ + + + + +R + E+ V+ + +L L+ Sbjct: 5 STLDKIVRQTIESIENAKEQIFAIAEDARTECSRLQKDLQEVREKAQAVIAQV-DLLTLK 63 Query: 283 DIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYG 342 + + R+ + + +T + D+ + + + + +R L+ + + + Sbjct: 64 ERQARLRLVEVSRELKRYT-EEDIRLAYEQARDIQVNLAVLREREGQLRAKRDELERRLR 122 Query: 343 ILLATLPQGRHLSHDQQQLVDTLVEQLTA------TLALDRHQERQQQLIVMEERATIAR 396 L + + L + ++D + L + + + + ER +AR Sbjct: 123 HLEGMVQRAEQLMNQVGVVLDFMGGNLKDLHVKMDEAQVRQQAALRIIMAQDRERFRLAR 182 Query: 397 ELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ- 455 E+HD AQ ++ + +QV + P R L +++ L S +LR++L R Sbjct: 183 EIHDGPAQGMNSLVLQVELCERLLQTDPGRVRRELQELKGRLRDSLKELRKILYDLRPHG 242 Query: 456 LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQ 515 L + GL A+ ++S + G V+ + + + + ++ +EAL N KH+ Sbjct: 243 LDDQGLIEAIRRYTADFSERTGLAVETRFFGQACRLERAYEVAIFRMIQEALQNVWKHAG 302 Query: 516 ASEVVVTVAQNDNQVKLTVQDNGCGVPEN---AIRSNHYGMIIMRDRAQSLRGDCRVRRR 572 A V V V + V+D+G G A + +G+ MR+RA+ L G+ V R Sbjct: 303 AKRVQVAFEIAPQAVSVIVRDDGVGFDVADIFARPGDRFGLCGMRERAELLDGEWEVLSR 362 Query: 573 ESGGTEVVVTFIPE 586 GT++ + Sbjct: 363 PGQGTQIKFRIPLK 376 >UniRef50_A8LRP9 Integral membrane sensor signal transduction histidine kinase n=28 Tax=Rhodobacterales RepID=A8LRP9_DINSH Length = 480 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 124/311 (39%), Gaps = 15/311 (4%) Query: 285 ELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGIL 344 E R+ ++ + DD + T W L Sbjct: 171 EARMITYVVGLQDWQWALGTGIFIDDVLTHVAAARAATESRIAQTFFW---IGAITLAAL 227 Query: 345 LATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQ 404 LA G ++ +++L D + ++ EER +ARELHDSI+Q Sbjct: 228 LAVFASGLLINIRERRLADA----------KLKALTQRVLDTQEEERGRVARELHDSISQ 277 Query: 405 SLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRP 463 L ++ + + + ++E + + + LN + ++R + R QL + GL P Sbjct: 278 LLVGIRYALELARRRVQTGDARAQENIEKGIDGLNGAIQEVRRISRDLRPGQLDDLGLGP 337 Query: 464 ALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTV 523 A++ EE++ + G ++ + + I L +IA+EAL+N +H+QA+EV + + Sbjct: 338 AIQDLAEEFTKRTGIRAEMKTVVFRNRLDPEAKIALYRIAQEALTNIERHAQATEVHLDL 397 Query: 524 AQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + L V DNG G+ + + G+ M++R + L G +V GT + T Sbjct: 398 FGHQTGATLRVADNGRGLANVSRGAGGLGLRNMQERVEQLDGTLQVFSS-EAGTRIDATV 456 Query: 584 IPEKTFTDVQG 594 Sbjct: 457 PLSHILPPEPA 467 >UniRef50_Q5NZX5 Putative sensory protein, two-component system n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NZX5_AZOSE Length = 498 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 62/331 (18%), Positives = 137/331 (41%), Gaps = 14/331 (4%) Query: 266 ERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGD 325 + + L + D + + E+ + + D + + + Sbjct: 164 QLAMHRFDDLPRFQYVSDGIVALSRLAPEKLRRSSDNFTGLIHPDDIAA-FHQSMKSSSE 222 Query: 326 RGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQ- 384 T W + +L L L D ++ T + + ++ Sbjct: 223 TLTRWSWAGRLCAGTHAERWISLQATPRLMDAGMVLWDGIMLDATDARRNEEKLRQSEEF 282 Query: 385 ---------LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIR 435 +I EE++ IARE+HD + Q L+ +KM +SC++ G S ++L ++ Sbjct: 283 LRDLCVRVGMIREEEKSAIAREIHDELGQLLTVLKMDLSCMREAGGLDSRSVAKML-RME 341 Query: 436 NELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPR--LVPS 493 + + ++R++ +T R ++ + GL PA+E +E+S+ +L + S Sbjct: 342 SLTDDILYRVRDIASTLRPKVLDLGLAPAIEWLAQEFSSHTRIVCRLSINGDELCGNLDS 401 Query: 494 HQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGM 553 + +I +E+L+NA +H++A + +++ + ++L ++D+G G +A+ G+ Sbjct: 402 TAITAIFRIVQESLTNAARHARAKHIDISLTRRGQFLQLLIRDDGVGFDPDALPICCNGL 461 Query: 554 IIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 +R+RA L + R+ GT + V Sbjct: 462 SGIRERAVILGAELRIDSSAHTGTTLEVLIP 492 >UniRef50_C5C2U0 Histidine kinase n=2 Tax=Actinomycetales RepID=C5C2U0_BEUC1 Length = 431 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 10/253 (3%) Query: 348 LPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLS 407 + +L L E + + ++ V++ER +ARE+HD++AQ L+ Sbjct: 176 RQALAEVHEANARLEAALEENAGLH---AQLLVQAREAGVLDERQRMAREIHDTLAQGLA 232 Query: 408 CMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALE 466 + Q+ + Q PE+ ++ + S A+ R + L + L A+ Sbjct: 233 GILTQLQAAE-QAAHEPEAWGRHVTNATDLARESLAEARRTVHAVEPEALADARLPEAIG 291 Query: 467 ASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQN 526 +S L PR + + LL+ A+EAL+N KH++AS V +T++ Sbjct: 292 DVARRWSEVNDVRADLTTTGDPRPMHVDVEVTLLRAAQEALANVAKHARASRVGLTLSYM 351 Query: 527 DNQVKLTVQDNGCGVPENAIRS-----NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVV 581 ++ V L V+D+G G +A R +G+ MR R Q L G V GGT + Sbjct: 352 EDLVTLDVRDDGVGFEPDATRGQGHADGGFGLAGMRQRVQRLAGRLDVESEPGGGTAISA 411 Query: 582 TFIPEKTFTDVQG 594 + V Sbjct: 412 SVPAIPATPAVPA 424 >UniRef50_A1HRV6 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRV6_9FIRM Length = 473 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 117/251 (46%), Gaps = 6/251 (2%) Query: 338 HTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARE 397 + G+L Q ++++ + L+E+L A+ ++ I +ER I+RE Sbjct: 217 GDEVGLLAVAFNQMVAGLKEKEKENNLLLEELRHKEAMRAFLIKKLFTIQEDERKRISRE 276 Query: 398 LHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-L 456 LHD Q L+ + + L + + +ELL + R+ + LR++ R L Sbjct: 277 LHDETGQLLASLLAYMKLLLSKL--TDQQQKELLQEARDVAVNALEGLRKIAVELRPPVL 334 Query: 457 TEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQA 516 + G+ A++ + +S + G V + ++ L +I +E+L+N KH++A Sbjct: 335 DDLGVTAAMQKYIQTFSGQQGLKVHFSVPEKQLELDPEVSLALYRILQESLTNIAKHARA 394 Query: 517 SEVVVTVAQNDNQVKLTVQDNGCGVP---ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRE 573 S V V ++ V+L V+D+G G+ E+A + N G+ M++RA+ L G + Sbjct: 395 SNVYVCLSAAGQTVRLVVRDDGLGIDGGLESAGQKNRLGIYGMKERAELLGGSLDIHSEN 454 Query: 574 SGGTEVVVTFI 584 GT V+ T Sbjct: 455 GCGTVVIATLP 465 Score = 71.5 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 109/334 (32%), Gaps = 26/334 (7%) Query: 58 YRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRA 117 Y L + ++ + ++ + T ++ + DG L L+D + A+++ Sbjct: 69 YALYERISKTQHNTEDVRYVLITDYTGRILAHTFSDGLPRGLATLRDSGGSS---AVIKF 125 Query: 118 QNRETVSADVSQFVAGLD---QLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWL 174 E + +V + D V + +T+ + + + M ++ F WL Sbjct: 126 DTNEGIIREVMVPIENGDIGFVRVGMSENSTQQLLNKTNRNFFIGIIMMCVIATFLATWL 185 Query: 175 RARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSA-------ELAESY 227 + +++P R L + + + + R +E+ +L A N M A E Sbjct: 186 TSLIIRPIRSLADAVAEIQSGNLSARVEAKTGDEVGLLAVAFNQMVAGLKEKEKENNLLL 245 Query: 228 AVLEQRVQEK--------TAGLEHKNQILSFLWQ-ANRRLHSRAPLCERLSPVLNGLQNL 278 L + + T + + +I L + L S + L L Q Sbjct: 246 EELRHKEAMRAFLIKKLFTIQEDERKRISRELHDETGQLLASLLAYMKLLLSKLTDQQQK 305 Query: 279 TLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSH 338 LL++ + + +P + DD G + + LK + Sbjct: 306 ELLQEARDVAVNALEGLRKIAVELRPPVL-DDLGVTAAMQKYIQTFSGQQGLKVHFSVPE 364 Query: 339 TQYGILLATLPQGRHLSHDQQQLVDTLVEQLTAT 372 Q L L Q+ + + + A+ Sbjct: 365 KQ---LELDPEVSLALYRILQESLTNIAKHARAS 395 >UniRef50_Q747N5 Sensory box histidine kinase n=2 Tax=Geobacter RepID=Q747N5_GEOSL Length = 518 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 61/347 (17%), Positives = 119/347 (34%), Gaps = 9/347 (2%) Query: 254 ANRRLHSRAPLCERLSPVLNGLQNLTLLRDIEL---RVYDTDDEENHQEFTCQPDMTCDD 310 +H + ++ + + R + C Sbjct: 150 IGEAMHISQETFRLVLDAMHDSVYVVGRDYNVIYANRAMRAGAYGDVSSDPCYRICRGCS 209 Query: 311 KGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLT 370 + C C + D+ ++ + Y + + + + + + + Sbjct: 210 EPCPDCTLEEVLSSDKPVCREFFDEKRNAWYSTIELAVRIPGMSAPAKLGVRRDITARKE 269 Query: 371 ATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSREL 430 R ++ ER ++RELHD + Q L+ +K+ L ++ Sbjct: 270 -AEQRSRMLSQRLLHAQESERKRLSRELHDDLGQLLNALKIGFDTLAEDLRQPSHDVQDR 328 Query: 431 LSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDY-QLPP 488 L + LN S +R L L GL + C + + ++L + Sbjct: 329 LWYLSESLNNSIHTIRRLCAGLHPSTLERLGLAETIRQQCTQAATTHSLDIELKCGTMLG 388 Query: 489 RLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGV---PENA 545 + S I+L +I +EAL N +KH+ A+ V+V + + V+L ++DNG G Sbjct: 389 VRLESDTEINLYRIFQEALHNVVKHADATRVMVRLVASHPTVRLQIEDNGGGFSMEDYAE 448 Query: 546 IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDV 592 + +H G+I M +R + L G ++ GT V V K Sbjct: 449 LSGHHLGLISMAERVELLGGTFQIASLPGLGTAVTVEVPFRKAPPGR 495 >UniRef50_Q8YV44 Two-component sensor histidine kinase n=3 Tax=Cyanobacteria RepID=Q8YV44_ANASP Length = 944 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 5/210 (2%) Query: 378 HQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNE 437 Q+R + ++EER +ARE+HD++AQ+ + + QV + E++ L I+ Sbjct: 733 LQKRAEAASILEERNRMAREIHDTLAQAFTGILAQVGAAKQVLTDDLEATESHLDLIKEL 792 Query: 438 LNASWAQLRELLTTFRLQLTEPG-LRPALEASCEEYSAKFGFPVKL--DYQLPPRLVPSH 494 + R + R QL E G L+ AL + L + + +P+ Sbjct: 793 ARTGLVEARRSVVALRPQLLEEGSLQSALHRLVAQL-RTAAIDTTLYYEIEGAVYSLPTE 851 Query: 495 QAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR-SNHYGM 553 +LL++ +EAL+NA++H+ A E+ V + + ++ L V+DNG G +I S +G+ Sbjct: 852 IESNLLRMGQEALTNAIRHANADEIRVELVYDRDRFCLRVRDNGQGFGVGSIPASEGFGL 911 Query: 554 IIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 + M +RA+ + +R + GTE+VVT Sbjct: 912 LGMSERAERIGAQLTIRSQPGQGTEIVVTV 941 >UniRef50_C0GH42 Multi-sensor signal transduction histidine kinase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GH42_9FIRM Length = 651 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 6/232 (2%) Query: 359 QQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQM 418 Q + + E+ + EER I+RELHDS AQSL + Q+ + Sbjct: 409 QHIAKDITEERKLH-ENQQFYIEHITRAQEEERLRISRELHDSTAQSLIVVLHQLEKYLV 467 Query: 419 QGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFG 477 D L L + ++ A ++R+ R L + GL P+LE +E + G Sbjct: 468 SSDHLRLGDSRFLFNVAEQVKAILQEVRQFSRDLRPSILDDLGLVPSLEWYIDELNRTHG 527 Query: 478 FPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDN 537 V L+ +++ + L +I +EAL N ++H++A+ V + ++N+V++ VQDN Sbjct: 528 LKVDLNIIGQKQMLRPEIRVSLFRIIQEALRNVMRHAEANNAKVKIEFDNNEVRVVVQDN 587 Query: 538 GCGVPENA----IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 G G +R+ G+ M +RA+ L G + + GT + + Sbjct: 588 GKGFDAEPLGDLLRNGKLGLAGMHERAKILGGSIEISSAKGAGTTIFIAVPL 639 >UniRef50_C6XAR1 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAR1_METSD Length = 465 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 63/302 (20%), Positives = 133/302 (44%), Gaps = 15/302 (4%) Query: 287 RVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLK---WRLADSHTQYGI 343 R+ +D + +E + + L+ +L + Q+G Sbjct: 171 RLMAEEDRPSFREALLTSANEMKVLNWEGRIWIKAWQDTKWINLRGSPIKLHNGEVQWGG 230 Query: 344 LLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIA 403 ++ + Q ++ + ++ + L H + + +ER IARE+HD + Sbjct: 231 IITNITQSKNEKLEIERSRQRMA-------ELSAHLTQVK----EQERRRIAREIHDDLG 279 Query: 404 QSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRP 463 +L+ +K+ ++ + + + E + + ++ ++ + + + R + E G+ Sbjct: 280 GNLTAIKIGLTSIIKRINPDEPKLVEKALNLESIVDRTFDIVHRIASDLRPDVLELGIVA 339 Query: 464 ALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTV 523 ALE C ++ +F P + V + +AI L +I +EA+SN KH++A +V V + Sbjct: 340 ALEWQCGQFEKQFSLPCRFYSSQTELAVSADEAITLFRICQEAMSNIAKHARARQVEVEL 399 Query: 524 AQNDNQVKLTVQDNGCGVP-ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVT 582 D + L + D+G G+ ++ ++N +G+ MR+R +L G V +R GGT V V Sbjct: 400 LVEDRDIMLRIVDDGQGIRMQDQHKANSFGLRGMRERVAALDGSLEVEKRVRGGTAVQVK 459 Query: 583 FI 584 Sbjct: 460 IP 461 >UniRef50_A1HU07 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU07_9FIRM Length = 478 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 72/427 (16%), Positives = 143/427 (33%), Gaps = 29/427 (6%) Query: 169 FTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYA 228 + L+ + L + + R N+ +L + + Sbjct: 55 LALRAANLILVNNYYDLHELVKDTQRTNDDVRYVFVVNNQGELLAHSFPAGFPKGLLQAN 114 Query: 229 VLEQRVQEKTAGL---EHKNQILSF-LWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDI 284 L Q K L E + ++ + + + L VLN +L + Sbjct: 115 TLASNEQYKIVELATEEGLVRDIAVPILEGRLGIVHVGLNDASLQNVLNRTTRQIMLD-M 173 Query: 285 ELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGIL 344 + V + RG L + T+ + G L Sbjct: 174 VIAVLIGIMATMFLTRRLVKPIQELVHVTSAITRGDLTQRAKATS--------DDEVGKL 225 Query: 345 LATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQ 404 + +++L H ++ + EER IARELHD Q Sbjct: 226 AVAFNAMADY-------LQQTMDELKQKEEARTHLLQKVIVAQEEERKRIARELHDETGQ 278 Query: 405 SLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRP 463 +L+ + M + CL R L ++R + + + + R L + GL P Sbjct: 279 TLASLMMGLKCLAATCPESERGCR--LEEMRLAVKKTIDAVHRMAIELRPSILDDMGLIP 336 Query: 464 ALEASCEEYSAKFGFPVKLDYQLP-PRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT 522 A+E ++ +G L Q + + + + +I +EAL+N K+++A V + Sbjct: 337 AVEKYVNDFRHNYGIDTDLHIQWQCEKRLVHEIEVTVYRIVQEALTNIAKYAKADNVCII 396 Query: 523 VAQNDNQVKLTVQDNGCGVPENA-----IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 + + +++ V+D+G G +A + G+ M++RA + G + GT Sbjct: 397 MTCDRRGLEVIVEDDGVGFDADAILQQSVAGTQLGLFGMQERATLVGGALTIESTPGRGT 456 Query: 578 EVVVTFI 584 + + Sbjct: 457 TLFLRIP 463 Score = 89.2 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 120/328 (36%), Gaps = 23/328 (7%) Query: 15 VALIVLLSTAIGLAGMAVSGWLVQGV---QGSAHAINKAGSLRMQS---------YRLLA 62 + + ++ +G + + +++ + Q I+ A +L +++ Y L Sbjct: 14 MLALTVVLILLGATSIVQTRFMMNDLFKEQQEKRGISIANTLALRAANLILVNNYYDLHE 73 Query: 63 AVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPAL-MRAQNRE 121 V +++ ++ + EL + G L NE + + + Sbjct: 74 LVKDTQRTNDDVRYVFVVNNQGELLAHSFPAGFPKGLLQANTLASNEQYKIVELATEEGL 133 Query: 122 TVSADVSQFVAGLDQL-VSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ 180 V L + V D + + + + V L+ + ++L RL++ Sbjct: 134 VRDIAVPILEGRLGIVHVGLNDASLQNVLNRTTRQIMLDMVIAVLIGIMATMFLTRRLVK 193 Query: 181 PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG 240 P ++L+ + SA++ D TQRA + +E+ L A N M+ L ++ L+Q+ + +T Sbjct: 194 PIQELVHVTSAITRGDLTQRAKATSDDEVGKLAVAFNAMADYLQQTMDELKQKEEARTHL 253 Query: 241 L--------EHKNQILSFLWQ-ANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDT 291 L E + +I L + L S + L+ + L ++ L V T Sbjct: 254 LQKVIVAQEEERKRIARELHDETGQTLASLMMGLKCLAATCPESERGCRLEEMRLAVKKT 313 Query: 292 DDEENHQEFTCQPDMTCDDKGCQLCPRG 319 D + +P + D + Sbjct: 314 IDAVHRMAIELRPSILDDMGLIPAVEKY 341 >UniRef50_Q5WCK2 Two-component sensor histidine kinase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCK2_BACSK Length = 354 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 112/262 (42%), Gaps = 5/262 (1%) Query: 333 RLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLAL-DRHQERQQQLIVMEER 391 + Q G + A + L D ++ + ++ + + + + IV +ER Sbjct: 90 HMEKGREQAGQMSADFKEASSLIIDMERRMSKQADRSQKLMEQWAEKESQLKSEIVSQER 149 Query: 392 ATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTT 451 IARELHDS++Q L M +S + E+ ++ QI +N + +R LL Sbjct: 150 NRIARELHDSVSQQLYAASMLLSAAVNGKNQDIEALQKRCEQIEKVVNDAQNDMRALLLQ 209 Query: 452 FRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNA 510 R QL + + +E + + K P+ ++ + L +I++EA++NA Sbjct: 210 LRPIQLEDQSFKEGVEQLVDSLAEKH--PLSFSVRIADAPLSPGIEDQLFRISQEAIANA 267 Query: 511 LKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVR 570 L+H++A E+ + + D L + D+G G + YG+ + +RA+ + R+ Sbjct: 268 LRHAEAKEISLYYDKFDQFALLKITDDGVGFDRKEH-TGGYGLNSIEERAEEIGATTRIV 326 Query: 571 RRESGGTEVVVTFIPEKTFTDV 592 GT V V K + Sbjct: 327 SVPGQGTSVEVKVPIVKGGEED 348 >UniRef50_A6GSY8 Sensory transduction histidine kinase n=1 Tax=Limnobacter sp. MED105 RepID=A6GSY8_9BURK Length = 512 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 5/252 (1%) Query: 345 LATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQ 404 + G L ++ + E+L R + + +ER IARE+HD + Sbjct: 265 NVFVWDGVLLDISDRKQAE---ERLQNAQTELRLVTTEFEKRREQERGAIAREIHDDMGG 321 Query: 405 SLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPA 464 SL+ +K V+ L A +E L + + A + + R + + GL PA Sbjct: 322 SLTKLKADVAWLNKNLTADSA-IQEKLDDMLELIEHLLASSQRIAKDLRPGILDYGLIPA 380 Query: 465 LEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVA 524 LE ++ + + + S Q+ L +I +EAL+N +KH+QA+ V V + Sbjct: 381 LEWQMNDFQKRTQIEGTFQCNVEELDLDSEQSTALFRILQEALTNIVKHAQATRVDVELF 440 Query: 525 QNDNQVKLTVQDNGCGV-PENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTF 583 ++++ L ++DNG G+ + ++ +G+ M++R + G V GT V+V+ Sbjct: 441 VTESELTLEIRDNGRGIENTDKLKETSFGLRGMQERVAAFEGWVDVSGSLGSGTTVMVSI 500 Query: 584 IPEKTFTDVQGD 595 + D Sbjct: 501 PRSIQTGEAGND 512 >UniRef50_B2JH43 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Burkholderia phymatum STM815 RepID=B2JH43_BURP8 Length = 493 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 74/356 (20%), Positives = 140/356 (39%), Gaps = 9/356 (2%) Query: 238 TAGLEHKNQILSFLWQANRRLHSRAPLCERLS-PVLNGLQNLTLLRDIELRVYD-TDDEE 295 T L + I + L ++ +RL + E + +L+ +T R+ E Sbjct: 131 THDLSQRQLIEAKLRRSEQRLQAMIDSVEDYAIFMLSPTGEVTSWNTGAQRIEGYCAGEI 190 Query: 296 NHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQY--GILLATLPQGRH 353 + F+ G R WR+ +++ ++ + + Sbjct: 191 IGRHFSVFYPPEARTAGLPERMLETASTQGRSEAEGWRVRSDGSRFWADAIITPIRDDKG 250 Query: 354 LSHDQQQLVDTLVEQLTAT-LALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQ 412 ++ L E L + EE+ IARELHD + Q L+ +KM Sbjct: 251 ALQGFAKVTRDLTEHKRLEQLEHVGELAAATERAREEEKKRIARELHDDLGQQLTALKMS 310 Query: 413 VSCLQMQGDAL--PESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASC 469 LQ +A + + + + + + LR + + R L + GL PA+E Sbjct: 311 AVILQQDVEAGHYTAETAAKARGLVVQADDTMSALRRIASNLRPTMLDDLGLLPAVEWLA 370 Query: 470 EEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQ 529 +E+S ++G + + +I +EAL+N +H+ A+EVVVT+ +DN Sbjct: 371 DEFSRRYGIKASTRLSAGELAFSDTASTAIFRIVQEALTNVARHACATEVVVTIELDDNA 430 Query: 530 VKLTVQDNGCGVP-ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 ++ + DNG G + + +G++ +R+R + L G + R G V + F Sbjct: 431 CEVRIDDNGRGAASAPGDKPDSFGLLGIRERVRQLNGTVSLGNRLDRGFRVQIRFP 486 >UniRef50_UPI00017893B7 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017893B7 Length = 357 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 113/272 (41%), Gaps = 9/272 (3%) Query: 325 DRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQ 384 ++G+ + G L G L ++ D + + + E+ + Sbjct: 88 EKGSLTDVMPDIGEDEVGRL------GEQLVKISKRWEDQVSSLQRLSTNNAQLAEQARV 141 Query: 385 LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQ 444 ++EER +ARELHD+++Q L + M + + D + ++ ++ I + ++ Sbjct: 142 TAIVEERQRLARELHDAVSQQLFAISMTATAVGRTLDKDFDKAQRQVALIEEMSAVAQSE 201 Query: 445 LRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIA 503 +R LL R L L L E K + + L+ HL +I Sbjct: 202 MRALLLHLRPVYLEGKALEQGLRDLITELRIKVPMEITFEMDDDIHLL-KGIENHLFRII 260 Query: 504 REALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSL 563 +EA+SN L+HS+A ++ + + + N V++ ++D+G G + + YG+ M++R + Sbjct: 261 QEAMSNTLRHSKAEKMDIRIHRRQNTVRVMLRDDGVGFELDDKKQTSYGLSTMQERVTEI 320 Query: 564 RGDCRVRRRESGGTEVVVTFIPEKTFTDVQGD 595 G + GT + + +GD Sbjct: 321 GGSLQFITAPGKGTRIEIIVPLI-NEERKRGD 351 >UniRef50_C2C0V0 Possible histidine kinase n=5 Tax=Listeria RepID=C2C0V0_LISGR Length = 358 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 14/264 (5%) Query: 345 LATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQE----------RQQQLIVMEERATI 394 + + + QQ + L R QE + ++ I++EER I Sbjct: 93 NLAIEKEESFAEIQQVYQQINRLRKKMQLQNARTQEIASGYAETAGQSKEAILVEERHRI 152 Query: 395 ARELHDSIAQSLSCMKMQVSCLQMQGDALP-ESSRELLSQIRNELNASWAQLRELLTTFR 453 ARELHDS++Q L M +S L QG+ + ++ L + + +N S +++R LL R Sbjct: 153 ARELHDSVSQQLFAAMMLLSALNEQGEKNATPAMQKQLKLVESIVNDSQSEMRALLLHLR 212 Query: 454 L-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALK 512 QL L+ +E +E +AK P+++ +++ + HL +I +E LSN L+ Sbjct: 213 PTQLEGKSLKVGMEQLLQELTAK--IPIEVRWEIADIALKKGIEDHLFRIVQELLSNTLR 270 Query: 513 HSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRR 572 HS+A+ + V +A D L V D+G G + YG+ MR+R + G ++ Sbjct: 271 HSKAALLEVRLAIVDQVAILKVVDDGVGFNVGEVAQGSYGLQNMRERVEEFGGTIKIISF 330 Query: 573 ESGGTEVVVTFIPEKTFTDVQGDT 596 + GT V V T D Sbjct: 331 PNQGTSVEVKIPLVVERTSEDNDQ 354 >UniRef50_C0VWJ7 Two-component sensory kinase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VWJ7_9CORY Length = 402 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 18/284 (6%) Query: 321 LPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQE 380 +P G ++ L G + + +S +++QL+D L++ + + Sbjct: 126 VPTGITVGSVVGPLLGGCVTIG-IAFVFRRMWRMSAEKEQLIDQLMK------TRSQLAQ 178 Query: 381 RQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP--ESSRELLSQIRNEL 438 + + + ER IA E+HD++AQ LS ++M +S + +A E + ++ + Sbjct: 179 TEHEAGMAAERQRIAHEIHDTVAQGLSSIQMLLSVAEADINAGKPKEEPLKKIAIAKKSA 238 Query: 439 NASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAI 497 + A+ R ++ + L + L ALE E + V + + R +P Sbjct: 239 ADNLAEARAMIAALQPAALAKTNLEGALERIAENIES---VDVNISVEGEDRQLPMRTET 295 Query: 498 HLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS-----NHYG 552 LL+IA+ AL N +KHSQA+ +VT+ + ++V+L V DNG G + + H G Sbjct: 296 TLLRIAQGALGNVVKHSQATAALVTLTYDPDEVRLDVVDNGVGFDPAQVAARPRGLGHIG 355 Query: 553 MIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDT 596 + MR+RA+ + G + GT + V T D + D Sbjct: 356 VDAMRERAREVGGTLAIESTPGQGTAISVAVPIINTMGDERKDE 399 >UniRef50_UPI00017449FC GAF domain protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017449FC Length = 690 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 68/268 (25%), Positives = 109/268 (40%), Gaps = 11/268 (4%) Query: 332 WRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEER 391 W L + G+L A + +Q V + + + V +ER Sbjct: 431 WTLRRTLWALGLLGAASLVFLGWAALLRQRVTEQTRIIGTQIE---------RSAVKDER 481 Query: 392 ATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTT 451 IARELHD+I Q L+ + +Q+ + + PE + L L + R + Sbjct: 482 ERIARELHDTIEQELAGLSIQLRNARQRIATAPEQASRSLGLAEQMLRHCREEARTSIRD 541 Query: 452 FRLQLTEP-GLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNA 510 R E GL ALE + + G L+ + P + IHLL+IA EA++NA Sbjct: 542 LRSTALELRGLHGALEEMLTPLATEAGAHFSLEVKGEPYHLAGPSEIHLLRIAHEAVANA 601 Query: 511 LKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENA-IRSNHYGMIIMRDRAQSLRGDCRV 569 +H+ + VT+ V L ++D+GCG +A H+GM+ +R+R L+G + Sbjct: 602 ARHASPRLIQVTIEFTPETVSLEIEDDGCGFDTDAPAPRGHFGMLGIRERVNKLQGTLQT 661 Query: 570 RRRESGGTEVVVTFIPEKTFTDVQGDTH 597 GT + V E H Sbjct: 662 HSEPGKGTRIHVVVPSEVAKRSNGSTPH 689 >UniRef50_Q01NC5 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC5_SOLUE Length = 437 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 63/255 (24%), Positives = 114/255 (44%), Gaps = 4/255 (1%) Query: 335 ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATI 394 + + G L+ + + L +A+ +H + +ER +I Sbjct: 182 QYGRRLAVTIALVIGLGLVLAAFSIRKILALENASSASQEALKHLSARLVEAQEDERRSI 241 Query: 395 ARELHDSIAQSLSCMKMQVSCLQMQGD-ALPESSRELLSQIRNELNASWAQLRELLTTFR 453 +RELHD + QSL+ + ++++ L PES ++I+ E+ S +R + R Sbjct: 242 SRELHDEVGQSLTGVLLEMANLSKLIRTRDPESVAAKAAEIKREVENSIGVVRNMALLLR 301 Query: 454 LQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALK 512 L + GL PAL+ E S + G V +D +P + +I +EAL NA++ Sbjct: 302 PSMLDDLGLVPALQWQAREVSKRSGLWVSVDAASVSEDLPEEHKTCIYRIVQEALHNAVQ 361 Query: 513 HSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRR 572 H+ A V V V Q ++++L ++D+G G A + G++ +++R L G V Sbjct: 362 HAGARHVKVAVEQQPDELRLAIEDDGKGFD--AQQGRGMGLLGIQERVGYLGGKFEVGSA 419 Query: 573 ESGGTEVVVTFIPEK 587 GT + VT + Sbjct: 420 PGKGTALKVTLPLVR 434 >UniRef50_A5GBT2 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GBT2_GEOUR Length = 610 Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 111/254 (43%), Gaps = 11/254 (4%) Query: 341 YGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHD 400 +G+L+ + ++ + +L R R ++ + EER IAR++HD Sbjct: 358 WGLLVLMCVLFYRVLALDREEREA----ARLSLEKSR---RAEETAIDEERRRIARDIHD 410 Query: 401 SIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEP 459 +AQ L+ M M+ S + + E E + R L+ + ++R + R +L E Sbjct: 411 GVAQDLAMMNMRASVWEHLVHSNREKMTEEIKLFRKLLHKNIGEVRRAIFAMRPVELDEL 470 Query: 460 GLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEV 519 G A+ +E+ G + L+ +P + L +I +E+L+N KH+ A+E Sbjct: 471 GFSEAVGRYVKEFGQYTGLRIDLEMAGD-IAMPRQLELELYRIIQESLNNIAKHAGATEA 529 Query: 520 VVTVAQN-DNQVKLTVQDNGCGVPENA-IRSNHYGMIIMRDRAQSLRGDCRVRRRESGGT 577 V ++ + + +++ DNG G +A +S G+ M++R + G + G Sbjct: 530 GVRISDDVAGCLTVSIADNGKGFDLSALAQSPRLGLRQMKERVERRNGTFLIDSGPGRGA 589 Query: 578 EVVVTFIPEKTFTD 591 + + F T + Sbjct: 590 AITICFPITITADE 603 >UniRef50_UPI000169369A sensor histidine kinase n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169369A Length = 224 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 2/217 (0%) Query: 371 ATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSREL 430 + + E+ + ++EER +ARELHD+++Q L + M + D + ++ Sbjct: 1 MSTHNAQLAEQARVSAIVEERQRLARELHDAVSQQLFAISMTATAALRTLDKDFDKAQRQ 60 Query: 431 LSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPR 489 + I + +++R LL R L L L +E AK + D Sbjct: 61 IFLIEEMSAVAQSEMRALLLHLRPVHLEGNPLAVGLHKLLQELKAKVPIEIVEDLD-EEI 119 Query: 490 LVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN 549 +P HL +I +EALSN+L+HS+AS++ V + + ++L+++DNG G + + Sbjct: 120 RLPKGIEDHLFRIVQEALSNSLRHSKASKLEVKLHHRGDGLRLSIRDNGIGFEIDNTKQA 179 Query: 550 HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 YG+ MR+R + G ++ GT + + Sbjct: 180 SYGLHTMRERVNEIGGSLQIITAPGKGTRIEIRVPIL 216 >UniRef50_C6J7D3 ATP-binding region ATPase domain-containing protein n=2 Tax=Bacillales RepID=C6J7D3_9BACL Length = 356 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 69/324 (21%), Positives = 128/324 (39%), Gaps = 13/324 (4%) Query: 277 NLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLAD 336 + ++ D + +YD +L V +++ Sbjct: 36 GVIVVSDSWVWIYDMAGIAVLALIIGYIAGRRIQGKIDHLHLNMLQVAKGNLSVRMPETA 95 Query: 337 SHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIAR 396 T G+ + QL+ L EQ +E+ + V+EER +AR Sbjct: 96 DQTFNGVYQ-EFNNMIDAMEKKMQLLQQLGEQEVVE------KEQAAEKAVLEERRRLAR 148 Query: 397 ELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-Q 455 +LHD+++Q L + M S L + + +L+Q+ N + Q+R L+ R + Sbjct: 149 DLHDTVSQQLFAIHMAASSLPKVLENNATQAETVLNQLIQMSNTAQKQMRALIAQLRPME 208 Query: 456 LTEPGLRPALEASCEEYSAKFGFPV--KLDYQLPPRLVPSHQAIHLLQIAREALSNALKH 513 L L AL+ +Y + G +D Q + + L I +EA++N +KH Sbjct: 209 LVGKSLAEALDQWFPDYCRQNGLKGIKDMDIQGD---MSEAKEHQLFLIIQEAMANIVKH 265 Query: 514 SQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRE 573 + AS V +++ + QV L++ D+G G + YG+ M++RA+ L G+ + + Sbjct: 266 AGASMVSLSLREGPRQVVLSISDDGQGFSSTYQKQGSYGLTTMKERAEKLGGNAEIISKP 325 Query: 574 SGGTEVVVTFIPEKTFTDVQGDTH 597 GT + V + D Sbjct: 326 GAGTTIRVHIPKFEEGKGGAADEQ 349 Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 40/125 (32%), Gaps = 10/125 (8%) Query: 160 AVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNM 219 +A+L + R+ L V+ + + R + + NNM Sbjct: 50 MAGIAVLALIIGYIAGRRIQGKIDHLHLNMLQVAKGNLSVRMPETADQTFNGVYQEFNNM 109 Query: 220 SAELAESYAVL---------EQRVQEKTAGLEHKNQILSFLWQ-ANRRLHSRAPLCERLS 269 + + +L E+ + A LE + ++ L +++L + L Sbjct: 110 IDAMEKKMQLLQQLGEQEVVEKEQAAEKAVLEERRRLARDLHDTVSQQLFAIHMAASSLP 169 Query: 270 PVLNG 274 VL Sbjct: 170 KVLEN 174 >UniRef50_Q47FQ9 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, dimerization and phosphoacceptor region n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FQ9_DECAR Length = 373 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 55/331 (16%), Positives = 128/331 (38%), Gaps = 4/331 (1%) Query: 260 SRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRG 319 + + ++ + + EL D+ + + + + Sbjct: 44 ALRSALAKTPELILLDVRMPGMDGYELCQRLKDNPKTREIPVIFLSALRETEDKVRGFSL 103 Query: 320 VLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQ 379 + + L + ++ + + ++L A+ + Sbjct: 104 GAVDYIAKPFQPEEVLARVRTHIELRRLQCRLEERVAERTEQLRQSSDELRASRERLQEL 163 Query: 380 ERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELN 439 Q + EER IARELHD + Q+L+ +++ ++ + Q L + + Sbjct: 164 AAFLQSVREEERTAIARELHDELGQALTALRIDLAWINRQCKTLGPEVQARADASCAIVE 223 Query: 440 ASWAQLRELLTTFRLQLTE-PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIH 498 + +R + R + + GL A+E E+++ + P L + +I Sbjct: 224 RTIDAVRRISEGLRPGMLDVLGLTAAIEYLVEQFAKRNDIPCYLTSDRDEFAIDDRVSIA 283 Query: 499 LLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRD 558 + ++ +EAL+N ++H+ A+ V +T++Q++N + + ++DNG G+ + +G++ MR+ Sbjct: 284 VFRLIQEALTNVVRHASATRVDITLSQDNNTICVDIRDNGIGLATGEPKQ-GFGLLGMRE 342 Query: 559 RAQSLRGDCRVRRRESGGTEVVVTFIPEKTF 589 R L G + GT ++ F K Sbjct: 343 RVTMLGGTIDIDGS--RGTRILARFPLFKGE 371 >UniRef50_Q314U9 Histidine kinase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q314U9_DESDG Length = 387 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 86/389 (22%), Positives = 139/389 (35%), Gaps = 26/389 (6%) Query: 218 NMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQN 277 + + LE+RV+E+TA L N L R + R E + N L+ Sbjct: 6 EATRAMEAVRKTLEERVKERTAALGRVNDRLE------REIAERKLHEELIVQHRNHLEA 59 Query: 278 LTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADS 337 L + DT T + ++G L G TL WR A Sbjct: 60 LMNALADSALLMDTGGRIITLNITAAQRLGLPERGSGGQVFFDLLQG-TTDTLVWRDALH 118 Query: 338 HTQYGILLATLPQGRHLSHDQQQL----------------VDTLVEQLTATLALDRHQER 381 L A + + EQ + L R + Sbjct: 119 EVLETFLPARFEVQAFGLELDVTYYPVFGYADWVTGVAVYMMDVTEQKQISRRLRRLSAQ 178 Query: 382 QQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSR-ELLSQIRNELNA 440 EER I RELHDS+AQ+LS +K + + + + E +S+ + Sbjct: 179 VL-SAQEEERKRIGRELHDSMAQTLSGIKFMLEGERSRLEQSGTGWPTERISKTIEYVQH 237 Query: 441 SWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHL 499 + + R ++ R L + GL AL +E S + LP + Q L Sbjct: 238 AIVETRRIVMDLRPTVLDDLGLIAALRWLQQEMSQIHSLTITSHLSLPENALSDVQKSVL 297 Query: 500 LQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDR 559 ++A+EAL+N ++HS + +++ Q + +TV DNG G N G+ MR+R Sbjct: 298 FRVAQEALNNVIRHSGSDSARISLEQVGEECVMTVTDNGSGFDRLDNTRNGIGLDSMRER 357 Query: 560 AQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 + + G + + GT V + Sbjct: 358 LELICGRLDIVTEKGIGTVVRAVVPLDSP 386 >UniRef50_C9RWH5 Integral membrane sensor signal transduction histidine kinase n=13 Tax=Bacillaceae RepID=C9RWH5_GEOSY Length = 344 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 3/242 (1%) Query: 352 RHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKM 411 R + Q Q ++ +ER + I+ EER +ARELHDS++Q L M Sbjct: 104 RQIVKLQTQWLEQTKRVQKLAAEKAEQEERLVERILSEERTRLARELHDSVSQQLFAASM 163 Query: 412 QVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCE 470 +S + E R+ L + ++ S ++R LL R L L+ + Sbjct: 164 MMSAVMETMPPDDERHRKQLKMVEQMIHQSQLEMRALLLHLRPVHLKGKSLQEGMNELLT 223 Query: 471 EYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQV 530 E + K P+++ +++ + HL +I +E+LSN L+H++A + V + + D Sbjct: 224 ELAGK--VPLEMKWKIEDISLDKGVEDHLFRILQESLSNTLRHAKAKSLEVLLIERDGFA 281 Query: 531 KLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFT 590 L V D+G G +S YG+ M +RA + G ++ + GT + V Sbjct: 282 ILRVTDDGVGFDVERSKSGSYGLQHMYERAAEIGGMLKIVSLKGQGTRLEVKVPLLHRGD 341 Query: 591 DV 592 D Sbjct: 342 DR 343 >UniRef50_Q4ZMH3 PAS n=6 Tax=Pseudomonas RepID=Q4ZMH3_PSEU2 Length = 670 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 67/386 (17%), Positives = 146/386 (37%), Gaps = 27/386 (6%) Query: 214 TALNNMSAELAESYAVLEQRVQEKTA------GLEHKNQILSFLWQANRRLHSRAPLCER 267 + EL + L +RV+E+ A ++ + ++ +R ++ Sbjct: 305 RQQQALEQELLAAREELARRVEEEEALRLAQFSIDQSTVGILWVNWDSRVRYANRAAESM 364 Query: 268 LSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRG 327 L + L+ D + + + C +LPV Sbjct: 365 LGYAPGQVVERPLIDFEPGLHMDRWLNLWKSARSSEDSPQVFETHCLRADGSLLPVDVSL 424 Query: 328 TTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIV 387 + L++R + + T V + L R + + Sbjct: 425 SFLRFR---------------------DAEYLVVFLTDVSERRRAHDLLRELSAHLESVR 463 Query: 388 MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRE 447 EE+A IARE+HD + Q L+ +K++ S ++ L E L ++ + + +R+ Sbjct: 464 EEEKAHIAREVHDELGQMLTVLKLETSMCELAYADLDPGLSERLDSMKRLIAQLFQLVRD 523 Query: 448 LLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREAL 507 + T R + + G+ A+E + A+ P + + +A + +I +EAL Sbjct: 524 VATALRPPILDAGIASAIEWQARRFEARTQIPCLVQVPDNLPALSDARATGMFRILQEAL 583 Query: 508 SNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDC 567 +N ++H++A V +++ D + +++ D+G G + R+ +G++ MR+R L G Sbjct: 584 TNVMRHARAHTVEISLTLQDGMMCMSIADDGQGFVIESGRAVSFGLVGMRERVLMLGGRL 643 Query: 568 RVRRRESGGTEVVVTFIPEKTFTDVQ 593 + GT + + + + Sbjct: 644 ELDSEVGEGTTLRAYIPLDTLAQERR 669 >UniRef50_C3PKA7 Two-component system sensor kinase n=2 Tax=Corynebacterium RepID=C3PKA7_CORA7 Length = 419 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 7/218 (3%) Query: 375 LDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALP-ESSRELLSQ 433 + E ++ + ER IA E+HD++AQ LS ++M + D ++E + Sbjct: 197 RSQLVESERTAGMTAERQRIAHEIHDTLAQGLSSIQMLLHAADRDLDQEDIPKAQERIEL 256 Query: 434 IRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVP 492 R + + R ++ + L+E L A+ + ++A G V +D + + +P Sbjct: 257 ARRTAADNLHEARAMIAALQPAALSETSLGAAMTRMADNFAATGGVDVSVDVEGDTQQLP 316 Query: 493 SHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRS---- 548 LL+IA+ A+ N +KH+ AS+ VTV ++V++ V DNG G +A+ + Sbjct: 317 MKVEAALLRIAQGAMGNVVKHAHASKARVTVTYAPDEVRVDVVDNGQGFDVSAVENKPAG 376 Query: 549 -NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIP 585 H G+ MR RA+ L G+ + GT V V+ Sbjct: 377 LGHIGLSAMRRRAEELGGEVVIESTPGSGTAVSVSVPL 414 >UniRef50_C4RLN3 Histidine kinase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RLN3_9ACTO Length = 565 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 87/392 (22%), Positives = 142/392 (36%), Gaps = 19/392 (4%) Query: 222 ELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERL-SPVLNGLQNLTL 280 + V+ R + K ++L+ L R+L + +L L+ + Sbjct: 168 TAGTLHRVMRVRGEGKPQPYAEATRLLTQLRTVARQLPGATLDPGGISEHLLEELRTVAR 227 Query: 281 LRDIELR----------VYDTDDEENHQEFTCQPDMTCDDKGCQLCPR------GVLPVG 324 + + + E T D D P+ G Sbjct: 228 AERAAVLSASGGGRLVVLAQAGVDRVDWETTLDADSAIADAWASQQPQTANRSQARSHAG 287 Query: 325 DRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQ 384 + L L G+L+ + V L L + + Sbjct: 288 GDVSALIVPLVAGVRTVGMLVMEADVAQAYPPPVVSRVTALTRPAALRLEAALLFDEVRS 347 Query: 385 LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQ 444 L EER +ARE+HD +AQ L + + D P + E L +R E+ + Sbjct: 348 LATNEERQRLAREIHDGVAQELVMVGYGIDNALAYVDEDPVETAEALRTLRGEVTRVITE 407 Query: 445 LRELLTTFRLQLT-EPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIA 503 LR L R ++ GL A+ A G V L +P+ LL+IA Sbjct: 408 LRLSLFELRSEVDRHGGLAAAIAEYARTVGASGGLRVHLSLDESTARLPAATEAELLRIA 467 Query: 504 REALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSL 563 +EA++NA KH+ AS + VT + ++ V D+G G+ + HYG+ IM +RA+ + Sbjct: 468 QEAVTNARKHAGASNLWVTCEVDPPYAQIEVSDDGHGI-GDQRTDGHYGLAIMAERAERI 526 Query: 564 RGDCRVRRRESGGTEVVVTFIPEKTFTDVQGD 595 RG +R R+ GT V V V+G+ Sbjct: 527 RGRLEIRPRQPSGTTVAVVLGSSPRRDRVRGN 558 >UniRef50_Q0RWJ5 Sensor kinase, two-component system n=7 Tax=Rhodococcus RepID=Q0RWJ5_RHOSR Length = 1607 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 73/344 (21%), Positives = 133/344 (38%), Gaps = 14/344 (4%) Query: 249 SFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTC 308 L A R+ + + E L+ + T R +E+ Sbjct: 1273 RSLLDAVGRIVASDDVEEVLAKLREATMATTSARRVEISRLPESVGPGGVPNGSPGASLG 1332 Query: 309 DDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQ 368 + RG+ + + ++A P G H + V+ L Sbjct: 1333 EPIVTGEAARGM----KMTERIAKPVVADGHNASSVVAAFPLGE--GHYHEPTVEVLAAL 1386 Query: 369 LTATLALDRHQERQQQLIV---MEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPE 425 A + ++ + R + IV ER IAR+LHD + + +S L+ GD E Sbjct: 1387 AGAVIEREKLRRRSMEWIVDVQEAERGRIARDLHDEFGHLFAGITEGLSALEKVGD---E 1443 Query: 426 SSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDY 484 ++R + +R + R + R L + GL +E E+ F ++L Sbjct: 1444 ATRRVTMDVRKIVRQGIQAARVGAWSLRPSGLDDLGLPGCVEQLVEDCRQMFPLRIELTA 1503 Query: 485 QLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPEN 544 +P + +I +EAL+N +HS+A+ V + + + V+ V+D+G G + Sbjct: 1504 TGHAGPIPPSVETAVFRIVQEALTNIDRHSRAAAASVVLVCSGHTVRAVVEDDGIGFDVD 1563 Query: 545 -AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEK 587 + +S G+I MR+RA+ +RG V + GT V+V + Sbjct: 1564 VSGQSGSLGLIGMRERARLVRGRLTVDSQPGQGTIVMVEVPIRR 1607 >UniRef50_A4J6C1 Histidine kinase n=2 Tax=Peptococcaceae RepID=A4J6C1_DESRM Length = 379 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 67/375 (17%), Positives = 150/375 (40%), Gaps = 20/375 (5%) Query: 230 LEQRVQEKTAGLEHKNQILSFLWQAN-----RRLHSRAPLCERLSPVLNGLQNL-TLLRD 283 L+ ++E + +E + + ++ ++ R + +L +++ + L R Sbjct: 8 LDNIIKETISVIEKSKEQIYYIAESAHLEWQRVENEIKQTKYQLGKIIDEVNKLEIEERR 67 Query: 284 IELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGI 343 +R+ + + + + Q+ ++ + + TL+++ Sbjct: 68 ARVRLMEVSRDFDRYNEAAIKQAY---EQAQVTQLRLVMLREEEKTLRFKRDHLEISLKR 124 Query: 344 LLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQL------IVMEERATIARE 397 + T + L + L + L+ + QQL EER +ARE Sbjct: 125 MKDTADRAEKLVSQVGVALQYLSKDLSGVSEKLTNLHDMQQLGISIIRAQEEERKRVARE 184 Query: 398 LHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-L 456 +HD AQS++ + M+ + P L ++ + S +R+++ R L Sbjct: 185 IHDGPAQSMANIVMRAEFCLKLLEMNPSMVGNELVSLQQLVRQSLQDVRKIIFDLRPMVL 244 Query: 457 TEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQA 516 + GL PA++ E+Y + + + + + + +I +EAL N KH+ A Sbjct: 245 DDLGLIPAVKRYLEDYKVQNNISADFVFIGKEQRFDASMEVAVFRIIQEALINIKKHAAA 304 Query: 517 SEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSN----HYGMIIMRDRAQSLRGDCRVRRR 572 V++ + +++ + ++D+GCG I+ YG++ MR+R Q L+G + Sbjct: 305 RHVLIKMELISSRINVYIKDDGCGFVVGHIKPRGDGSGYGLLGMRERIQLLKGTLSINST 364 Query: 573 ESGGTEVVVTFIPEK 587 GTE+ + + Sbjct: 365 PGKGTELNFSLPLDT 379 >UniRef50_B2UDW5 Multi-sensor signal transduction histidine kinase n=12 Tax=Burkholderiaceae RepID=B2UDW5_RALPJ Length = 485 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 78/348 (22%), Positives = 142/348 (40%), Gaps = 14/348 (4%) Query: 253 QANRRLHSRAPLC----ERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTC 308 Q +R+L L L+ ++ +E D + T + Sbjct: 117 QVSRKLTEMELTLIYGKRDLEVALDLVRTDFGKASMEAVRQGLDRLRQREIATVARSLEH 176 Query: 309 DDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQ 368 ++ L G+ + L L H + LA + R ++ ++ Q +D +V + Sbjct: 177 AERDLALSRYGIALITAVNIILLVVLGMQHAKR---LAVTERERDMAEEESQKLDRMVRE 233 Query: 369 LTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSR 428 T L+ Q + +E+ +ARELHD + L+ KM + L+ + A + Sbjct: 234 RTRQLSD---LAAHLQRVTEDEKTRLARELHDELGAILTATKMDLHWLRSRIHANEPAVS 290 Query: 429 ELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLP 487 E ++++ ++ R L+ R L GL AL E+ + G+ ++ Sbjct: 291 EKITRVMAHVDQGIQIKRRLIEDLRPTILLNLGLVEALSQLTEDVGTRNGWHTEVSLPDD 350 Query: 488 PRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIR 547 + AI L +I +E+L+NA K++ A+ V V + + V+L V+DNG G P + R Sbjct: 351 MPKLTDDAAIALYRIVQESLTNASKYAHATTVSVALDVGEEGVRLRVRDNGRGFPADIER 410 Query: 548 S---NHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDV 592 H+G++ M RA +L G + GG ++V P D Sbjct: 411 RRMVGHHGLLGMEQRAIALGGTLVIDSMPGGGVTIIVELPPSDAVFDR 458 >UniRef50_Q9KDL3 Two-component sensor histidine kinase n=1 Tax=Bacillus halodurans RepID=Q9KDL3_BACHD Length = 351 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 2/233 (0%) Query: 353 HLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQ 412 L+ +++ + + + + QE ++ V EER +AR+LHD+++Q L + M Sbjct: 114 RLNRMAERVEEQVASLQRLSSERAKMQETVKKAAVTEERQRLARDLHDAVSQQLFAISMM 173 Query: 413 VSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEE 471 + ++ E ++ + + N + A++R LL R L L+ +E E Sbjct: 174 TAAIKQNLHEATEEVQQQMDVVEKMANTAQAEMRALLLHLRPAELEGKSLQQGVEYLLHE 233 Query: 472 YSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVK 531 K GF + + P +P L ++ +EA+SN L+H+QA V V Q + QV+ Sbjct: 234 LEQKQGFKITKRLE-PMDELPKGVEDQLFRMLQEAISNILRHAQAHHVEVRFWQTERQVR 292 Query: 532 LTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 L + D+G G YG+ M +R + G + GT++ Sbjct: 293 LKLIDDGVGFDVQKETHGSYGLQTMHERINEIGGVLDIVSAPGKGTQLEAKIP 345 Score = 48.8 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 27/229 (11%), Positives = 69/229 (30%), Gaps = 4/229 (1%) Query: 155 VHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGT 214 + + + M + + + + + Q+L F+ + G +E+A L Sbjct: 54 ILVPILLSMIAIGLIAGMMQSLPIKRKLDQILHGVLLYERGTFSHQIESEGEDELAELTD 113 Query: 215 ALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNG 274 LN M+ + E A L++ E+ E + + + + +RL L + +S L Sbjct: 114 RLNRMAERVEEQVASLQRLSSERAKMQETVKK--AAVTEERQRLA--RDLHDAVSQQLFA 169 Query: 275 LQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRL 334 + +T L + ++ + + L + + Sbjct: 170 ISMMTAAIKQNLHEATEEVQQQMDVVEKMANTAQAEMRALLLHLRPAELEGKSLQQGVEY 229 Query: 335 ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQ 383 + + + + + D L L ++ + Sbjct: 230 LLHELEQKQGFKITKRLEPMDELPKGVEDQLFRMLQEAISNILRHAQAH 278 >UniRef50_B2J8K5 Integral membrane sensor signal transduction histidine kinase n=6 Tax=Cyanobacteria RepID=B2J8K5_NOSP7 Length = 421 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 6/232 (2%) Query: 360 QLVDTLVEQLTATLALDRHQERQQQL---IVMEERATIARELHDSIAQSLSCMKMQVSCL 416 ++ + +A ++ +E ++ +EER IARE+HDS+ SL+ + +Q+ Sbjct: 190 AVLSERHSREKLAIANEKLREYAMRIENQATLEERNRIAREIHDSLGHSLTALNLQLETA 249 Query: 417 QMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAK 475 + P + L+ + + + +R+ ++T R L E L A+ E + Sbjct: 250 LKLWQSNPGKAETFLATAKELGSKALNDVRQSVSTMRSNPLQEQSLERAIANLAENFHRS 309 Query: 476 FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQ 535 G L +P + +I +E+L+N K++ A+EV + +A ++L +Q Sbjct: 310 NGILPICQINLE-YSLPPEINTAIYRITQESLTNITKYAYATEVKLELATIRGNLRLIIQ 368 Query: 536 DNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEK 587 DNG G + +G+ MRDR +L GD + G ++ V + Sbjct: 369 DNGRGFDLGQ-NTTGFGLHSMRDRTLALGGDFNINSTPGSGCKITVNIPLMR 419 >UniRef50_D2WA17 NirW n=1 Tax=Methylomonas sp. 16a RepID=D2WA17_9GAMM Length = 525 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 66/322 (20%), Positives = 126/322 (39%), Gaps = 8/322 (2%) Query: 268 LSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLC---PRGVLPVG 324 L + + LT L +E D F + G L G + G Sbjct: 199 LFALAFVVGQLTYLGWLEALFADHARAYWSFLFITAAAVGFGRHGVLLIIVLTAGQVLFG 258 Query: 325 DRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQ 384 +R + + L+ G L+ + ++ + + + L +R +Q Sbjct: 259 HMRNVGTFRDSGLQDIWFFLVILTIVGVALAINVEERIRREADLRVSQRTLKALMQRNEQ 318 Query: 385 LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQ 444 + EER IARE+HD + Q L+ +KM + L S R+ ++ + ++ Sbjct: 319 -VREEERHHIAREIHDELGQVLTAIKMHAALLTRTTPH-AGSWRDDINHLLQLIDGGIKV 376 Query: 445 LRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAR 504 +R + R + GL PAL+ ++++ G +L + + L ++A+ Sbjct: 377 VRNIALHLRPPILALGLVPALQWLTDQFAETHGIVCELATEGDTSGIQEPYLTTLFRLAQ 436 Query: 505 EALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI--RSNHYGMIIMRDRAQS 562 EAL+N +H++A +V + + ++ L V DNG G + N G+ M R + Sbjct: 437 EALTNIARHAEAGKVWIKLTAEPERISLVVADNGHGFDVDEELKTGNSLGLNGMLHRVEM 496 Query: 563 LRGDCRVRRRESGGTEVVVTFI 584 L G+ + GT ++ Sbjct: 497 LDGEFEIHSNA-EGTILLCHLP 517 >UniRef50_B2GCM4 Two-component sensor histidine kinase n=8 Tax=Lactobacillus RepID=B2GCM4_LACF3 Length = 355 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 63/257 (24%), Positives = 116/257 (45%), Gaps = 5/257 (1%) Query: 344 LLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIA 403 +L+ Q L + +D +A R + +ER I+++LHDSIA Sbjct: 100 VLSPTDQVYALELKSRATLDRATLDRATQVAQQRMLNQYVNRAYEDERKRISQDLHDSIA 159 Query: 404 QSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLR 462 Q + M V L+ + PE +++ + I +L+ + +++E+ R L GL Sbjct: 160 QGVYSAIMGVRRLKSEQLDEPER-QQVSTMIETQLDDTLREVKEMALDIRPSVLDSFGLV 218 Query: 463 PALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVT 522 A+ A + + G + + + + + L +I +EA++NALKH+ +E+ V Sbjct: 219 AAIRALAKRLTENSGVIIDVIGKADTSGLTTDVQSVLYRITQEAINNALKHANPTEITVM 278 Query: 523 VAQNDNQVKLTVQDNGCGVPENAIR---SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEV 579 + + + + L V DNGCG A R + G++ M +R ++L G + GT V Sbjct: 279 LVAHAHYISLEVIDNGCGFDFQAHRGFNGHSLGLMNMSERVKALNGSFMIDSAPGQGTTV 338 Query: 580 VVTFIPEKTFTDVQGDT 596 V F + V G++ Sbjct: 339 TVKFPVIEINHQVNGES 355 >UniRef50_Q0B944 Multi-sensor signal transduction histidine kinase n=29 Tax=Burkholderiaceae RepID=Q0B944_BURCM Length = 707 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 14/246 (5%) Query: 361 LVDTLVEQLTATLALDRHQERQQQL------IVMEERATIARELHDSIAQSLSCMKMQVS 414 ++ + E+ A AL + +E ++L + EE+ IARELHD + Q L+ +KM +S Sbjct: 459 MLRDITERQRAENALKQSREELRELSANLQNVREEEKTRIARELHDDLGQQLTALKMDLS 518 Query: 415 CLQMQGDA-----LPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEAS 468 ++ Q A + L +R ++A+ A +R + R L + GL PA+E Sbjct: 519 VIEQQLRAPGRAQPNDDVLSHLQGMRRLIDATVASVRRIAADLRPVMLDDLGLVPAIEWL 578 Query: 469 CEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDN 528 +++ ++G V+ + S A L +I +EAL+N +H+ A+ V + + + Sbjct: 579 ANDFTNRYGIDVERHIETGGLTFTSAGATTLFRIVQEALTNVARHADATRVALRLDIEEG 638 Query: 529 QVKLTVQDNGCGVPEN--AIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 L V DNG G A +G+I +R+RA L G+ + + G + V F Sbjct: 639 FCVLRVADNGRGAAPGGSAHEDKSFGLIGIRERAHMLGGNVTIDTALARGFSITVAFPLG 698 Query: 587 KTFTDV 592 + Sbjct: 699 TVQQET 704 >UniRef50_C8WYI2 Histidine kinase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WYI2_ALIAD Length = 223 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 52/203 (25%), Positives = 105/203 (51%), Gaps = 3/203 (1%) Query: 385 LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQ 444 ++ EER IAR+LHD Q+L+ + M++ L+ D+ P+ +++ + Q+ + + + Sbjct: 17 RMLEEERRRIARDLHDGPVQALTNISMKLEVLKHMLDSNPQIAKDQVDQLHRRVTEAVKE 76 Query: 445 LRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQL--PPRLVPSHQAIHLLQ 501 +R L+ R + E GL A +A C ++ +G Q + + + L + Sbjct: 77 IRALIYDLRPLAVDEVGLIEATKALCSQFEKNWGISTSFVVQDGVTSAEITPAKQVALYR 136 Query: 502 IAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQ 561 + +E L+N KH++A+ VV ++++ + +TV+D+G G N + HYG+I M++RA+ Sbjct: 137 LIQEILNNIKKHARATTTVVEFLRDESDLIITVKDDGVGFDTNYVPPGHYGLIGMKERAE 196 Query: 562 SLRGDCRVRRRESGGTEVVVTFI 584 L G + G+ ++ Sbjct: 197 FLGGRLEIHSIIGQGSTFIIRIP 219 >UniRef50_D2ARZ7 Histidine kinase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2ARZ7_STRRD Length = 397 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 55/270 (20%), Positives = 101/270 (37%), Gaps = 15/270 (5%) Query: 327 GTTLKWRLADSHTQYGILLATLPQ---GRHLSHDQQQLVDTLVEQLTATLALDRHQERQQ 383 G +++ + + + L + ++++ E+ L+ + Sbjct: 131 GPVVRFLVENQGDTFNFLSVSTIVIFFSAVFGIWMERIMRQSEERAALIAELEAQRAEVS 190 Query: 384 QLIVM----EERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELN 439 +L ER +A E+HD++AQ + + M + + Q D LS Sbjct: 191 RLSAERGALAERERLAGEIHDTLAQGFTSIIMLIQAAEAQSDP-----ARHLSLAVQTAR 245 Query: 440 ASWAQLRELLTTFRL-QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIH 498 + A+ R L+ L L AL + G + R +P + Sbjct: 246 ENLAEARALIAALSPAPLDGSTLDEALVRLAGRLREETGIATAFSLRGESRPLPPPTEVV 305 Query: 499 LLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRD 558 LL+ A+EAL+N KH+ A V V+ + V L ++D+G G YG+ MR Sbjct: 306 LLRAAQEALANVRKHAAAGRVEVSASYGPETVALEIRDDGRGFDPAVAE--GYGLRGMRA 363 Query: 559 RAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 R + + G + +GGT + E+ Sbjct: 364 RVEQVGGTLTLTSSPAGGTTLEAVLPAEQP 393 >UniRef50_D0WS36 Putative signal transduction histidine kinase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WS36_9ACTO Length = 418 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 75/370 (20%), Positives = 133/370 (35%), Gaps = 16/370 (4%) Query: 242 EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFT 301 N ++ + P+ L +L G LL + + D T Sbjct: 52 WFANLLIGLAYAVPMAFRRTHPVPSAL-TILCGAGVHLLLEPANITLADFAVVAAVYAVT 110 Query: 302 CQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQL 361 + L G + T+ + + +G L + ++ L Sbjct: 111 VYGPVWAHRLVLSLTLLGSFFIAIPTLTMGGAIRNDWATWGPFLGIVTYIMAVTLAVYGL 170 Query: 362 VDTLVEQLTATLALDR-------HQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVS 414 QL L+L R + +++L V+EER+ IARE+HD +A +LS + Q Sbjct: 171 ALARRSQLAKMLSLMRIASDAQAAAKTERELAVLEERSRIAREMHDIVAHTLSVVIAQAD 230 Query: 415 CLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ--LTEPGLRPALEASCEEY 472 + PE+S L+ I + + +R ++ R +P L +E E Sbjct: 231 GGRYAATKDPEASTRALATISDMARDALKDIRSIIGVLRESEGDEQPTLPQPIERDLETL 290 Query: 473 SAK---FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQAS-EVVVTVAQNDN 528 G V R +P + +I +EA++N+LKH+ + + V + D Sbjct: 291 VRNVRDSGVRVSFVRTGQSRTLPVGVGNAVYRICQEAITNSLKHAGPTPHITVLLQTTDA 350 Query: 529 QVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKT 588 + L V D+G G +G+I M +RA + G R GG V+ + Sbjct: 351 ALLLQVDDDGRG-AAAPSDGKGHGLIGMSERASAFGGSVTSGPRPGGGFRVLASIP-IPH 408 Query: 589 FTDVQGDTHE 598 + H+ Sbjct: 409 LDNSNRSEHD 418 >UniRef50_B1ZSZ0 Histidine kinase n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSZ0_OPITP Length = 1031 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 66/313 (21%), Positives = 123/313 (39%), Gaps = 9/313 (2%) Query: 281 LRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLK-WRLADSHT 339 + + D + P L + + + Sbjct: 720 ASGSSVALSDLHEGVYRLRVRLIDSRGPIGASKAFGFTVTPPWYRHWYVLASYPILLAAL 779 Query: 340 QYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELH 399 +G++ + + + +QLV +L T+ + Q+ + + ER +A E+H Sbjct: 780 LFGLVRFAMRRAEARNAALEQLVAQRTGELQTTM--RQLQQETRTSATLAERNRLAGEIH 837 Query: 400 DSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFR-LQLTE 458 DS+ Q + + +Q+ PE + L+ N + S ++R + L Sbjct: 838 DSLEQGFTGLTLQLETTAAFSTCSPE-VKSGLAVALNMVAFSRNEVRHAVRDMHSPILAS 896 Query: 459 PGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASE 518 L AL + + + +L + P + S HLL+IA+EA++NA+KH+ AS Sbjct: 897 ADLETALRQILAQVAPHADYA-RLRIEGSPVRLGSSVEHHLLRIAQEAIANAVKHAAASH 955 Query: 519 VVVTVAQNDNQVKLTVQDNGCGVPENA---IRSNHYGMIIMRDRAQSLRGDCRVRRRESG 575 + VT+A ++V+L ++D+G G A H+G+ R RA + G + R Sbjct: 956 LAVTLAFRKSEVELDIRDDGRGFDPAAVLNAGIGHFGLPSFRGRANKIGGTVEITSRPGA 1015 Query: 576 GTEVVVTFIPEKT 588 GT + V EK Sbjct: 1016 GTRITVRVPVEKA 1028 >UniRef50_B5HYF1 Two-component system sensor kinase n=10 Tax=Streptomyces RepID=B5HYF1_9ACTO Length = 400 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 72/347 (20%), Positives = 118/347 (34%), Gaps = 20/347 (5%) Query: 256 RRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQL 315 RR+ R L V ++ + Sbjct: 61 RRMPERMLLLAVGLGVAQLALDVETTSADFAFLVIVYTVAATGARWASRLALTIGLCAAP 120 Query: 316 CPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLAL 375 + P G + T L + + L Sbjct: 121 VAQLRWPNEHSGVLGNVAIVIFQT------VPFALAWVLGDSIRTRRAYFAQLEERNARL 174 Query: 376 DRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIR 435 ++ +E Q ++ V ERA IARELHD +A ++S M +Q DA P+ +++ L I Sbjct: 175 EKEREAQAKVAVAAERARIARELHDVVAHNVSVMVVQADGAAYVLDAAPDQAKKALETIS 234 Query: 436 NELNASWAQLRELLTTFRLQLTEPGL-------RPALEASCEEYSAKFGFPVKLDYQLPP 488 + + A++R LL R + G +E E+ G PV + P Sbjct: 235 STGRQALAEMRRLLGVLRTGEHQEGGEYVPQPDVEQIEDLVEQCRG-SGLPVDFKIEGTP 293 Query: 489 RLVPSHQAIHLLQIAREALSNALKHSQASE-VVVTVAQNDNQVKLTVQDNGCGVP----- 542 R +PS + +I +EAL+N KH + V + D+ + L V+D+G G P Sbjct: 294 RPLPSGVELTAYRIVQEALTNTRKHGGPNAGASVRLVYFDDGLGLLVEDDGKGAPHELYE 353 Query: 543 ENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTF 589 E +G+I MR+R + G R GG + + Sbjct: 354 EGGADGAGHGLIGMRERVGMVGGTLDAGPRPGGGFRISALLPLKPAH 400 >UniRef50_UPI00016AFAA4 response regulator/sensory box histidine kinase n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AFAA4 Length = 672 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 119/587 (20%), Positives = 204/587 (34%), Gaps = 31/587 (5%) Query: 23 TAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAF 82 T +A ++ + + + A A+ L S LL V K + ++ + + Sbjct: 98 TITAIASLSTAVAI-WPLMPKALALPGVKQLEAASNDLLREVAAHRKTEEELQALNRELE 156 Query: 83 SAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSG-F 141 R A+R +L + EL AL ++ E + LD +V+ Sbjct: 157 H----RVAQRTAELERAADALRRKSVELEHALQSLRDSEERMRQIVD--TALDAVVTMDS 210 Query: 142 DRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRA 201 D + A + +I R L + QR Sbjct: 211 DGVVVGWNPQAAAIFGWSADEALGRSMSELIIPHRYREAHTRDLQRYLETGEAKLLHQRI 270 Query: 202 NISGRNEMAMLGTALNNMSAELAES--YAVLEQRVQEKTAGLEHKNQILSFLWQANRRLH 259 E L + ELA + + + + + L + +R Sbjct: 271 ------EWTALHRDGHEFPVELAITPIGVGTRRYFSGFLRDITARKETERALRDSEKRFR 324 Query: 260 SRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRG 319 + ++ + +L E T Q DD L Sbjct: 325 ATFEQAAVGIAHVSPDGRWLRVNQ-KLCDIVGYTREELLALTFQDITHPDDLDADLAQVR 383 Query: 320 VLPVGDRGTTL----KWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLAL 375 + G T +R S + +A + +V + E+ A AL Sbjct: 384 QVLDGQIDTYTMEKRYFRKDHSEVWIELTVALMRDDAGKPSYFISVVADIAERKRAEEAL 443 Query: 376 DRHQERQQQL------IVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESS-- 427 +E ++L I EE A IARELHD Q L+ +KM V+ L+ + A PE Sbjct: 444 RISREELRRLSAHIQKIREEEMARIARELHDDFGQQLTALKMAVTLLEHKKPAGPERLIS 503 Query: 428 RELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCEEYSAKFGFPVKLDYQL 486 R LS I ++ +R R L + GL PA++ EE+SA++ V Sbjct: 504 RNDLSSIYALIDQLINSVRRFAADLRPAMLDDLGLIPAIDWLIEEFSARYHVHVTRHIDA 563 Query: 487 PPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAI 546 + + +I +EAL+N +HS A+EVV+ + ++D+ + + DNG G ++ Sbjct: 564 QAIHFNRESRVGVFRIVQEALTNVARHSAATEVVIDITRDDSHCIVRIADNGRGAVRDSS 623 Query: 547 -RSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDV 592 +G++ MR+RA L GD ++R G + VT Sbjct: 624 LGRRSFGLLGMRERAALLGGDTQIRTSPGAGFVLTVTLPLAAVEAQA 670 >UniRef50_D0BKY9 Sensor histidine kinase VraS n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BKY9_9LACT Length = 351 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 61/244 (25%), Positives = 119/244 (48%), Gaps = 4/244 (1%) Query: 343 ILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQ-ERQQQLIVMEERATIARELHDS 401 +L+ L + ++ + LV+ L + + E ++ I+ ER IARELHDS Sbjct: 104 LLMIRLDTFFQETAKIAEMQEQLVQNLQQISSRPEYIGEETKEEIIELERHRIARELHDS 163 Query: 402 IAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEPG 460 ++Q L M +S + Q + L ++ L+ + +N S +++R LL R L Sbjct: 164 VSQQLFAAMMMLSAMNEQKEQLSPVIQQQLALVEKVINDSQSEMRALLLHLRPISLENKT 223 Query: 461 LRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVV 520 L +E+ +E + + L ++L +PS HL +I +E +SN L+H++A ++ Sbjct: 224 LVQGIESLLKELT--TKVQLSLHWELDEVTLPSTFEDHLFRIVQELVSNTLRHAKAKQLE 281 Query: 521 VTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVV 580 V + Q D+ + L + D+G G + ++ YG+ + +R + G C++ + GT + Sbjct: 282 VFLKQKDDYIILKLVDDGIGFDTSVSKAGSYGLKNIEERVAGMGGQCKIISIANQGTIIE 341 Query: 581 VTFI 584 + Sbjct: 342 IKIP 345 >UniRef50_A4X9X2 ATP-binding region, ATPase domain protein domain protein n=2 Tax=Salinispora RepID=A4X9X2_SALTO Length = 563 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 86/393 (21%), Positives = 141/393 (35%), Gaps = 19/393 (4%) Query: 222 ELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERL-SPVLNGLQNLTL 280 + ++ R K ++L+ L R+L + +L L+ LT Sbjct: 167 AARTLHRMIRARSNSKPQPYAEATRLLTQLRTVARQLPGATLDPGGISEHLLEELRALTR 226 Query: 281 LRDIELR----------VYDTDDEENHQEFTCQPDMTCDDKGCQLCPR------GVLPVG 324 + + + E T D D P+ VG Sbjct: 227 ADRAAVLSASGGGRLVVLAQCGSDRVDWETTLDADSAIADAWASQQPQTAAHSQARSHVG 286 Query: 325 DRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQ 384 + L L G+++ L L + + Sbjct: 287 GEVSALIVPLVAGVRTVGLVVLEADVAHAYPPAVVARATGLTSPAALRLEAALLFDEVRS 346 Query: 385 LIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQ 444 L EER +ARE+HD +AQ L + + E + E L +R E+ + Sbjct: 347 LATNEERQRLAREIHDGVAQELVMVGYGIDNALATVHEDTEETAESLRGLRQEVTRVITE 406 Query: 445 LRELLTTFRLQLT-EPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIA 503 LR L R ++ GL A+ G V L +P+ LL+IA Sbjct: 407 LRLSLFELRSEVDRHGGLAAAIAEYARTVGVSGGLRVHLSLDESTARLPATTEAELLRIA 466 Query: 504 REALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSL 563 +EA++NA KH+ A+ + VT A + ++ V D+G G+ + HYG+ IM +RA+ + Sbjct: 467 QEAVANARKHASAANLWVTCAVDPPYAQIEVSDDGHGIS-DQHTDGHYGLAIMAERAERI 525 Query: 564 RGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDT 596 RG +R R+ GT V V +V+G T Sbjct: 526 RGRLEIRPRQPSGTTVTVVVGSSPQRDNVRGST 558 >UniRef50_C0XNJ5 Two component system histidine kinase n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XNJ5_9CORY Length = 412 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 67/250 (26%), Positives = 117/250 (46%), Gaps = 18/250 (7%) Query: 347 TLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSL 406 +S +++ L+D L+ + E +++ V +ER +A E+HD++AQ L Sbjct: 159 AFTTIARVSKERESLIDELL------TTRQQLAETEREAGVSQERERLAHEIHDTVAQGL 212 Query: 407 SCMKMQVSCLQMQGDALP------ESSRELLSQIRNELNASWAQLRELLTTFRL-QLTEP 459 S ++M + DA ++ + R +++ A+ R ++ LTE Sbjct: 213 SSIQMLLHAADRDLDATGLPPGELARAKSRIETARRAASSNLAETRAMIAALTPAPLTEA 272 Query: 460 GLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEV 519 LR ALE ++S G ++++ +P LL+IA+ A+SNA++HS A+ + Sbjct: 273 SLRQALERIARDFSQASGIGIEVESDGEHTPLPMRCEAGLLRIAQGAVSNAVQHSGATRI 332 Query: 520 VVTVAQNDNQVKLTVQDNGCGVPENAIRS-----NHYGMIIMRDRAQSLRGDCRVRRRES 574 VT+ + ++V+L V DNG G A+ S H G+ MR RA+ L G+ V Sbjct: 333 RVTLTYSPDEVRLDVVDNGRGFDPLALESAPTGLGHLGLSAMRSRAEELGGELIVESAPG 392 Query: 575 GGTEVVVTFI 584 G T V Sbjct: 393 GPTAVTAAIP 402 >UniRef50_B1Z4G8 Multi-sensor signal transduction histidine kinase n=1 Tax=Burkholderia ambifaria MC40-6 RepID=B1Z4G8_BURA4 Length = 665 Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 13/240 (5%) Query: 361 LVDTLVEQLTATLALDRHQERQQ------QLIVMEERATIARELHDSIAQSLSCMKMQVS 414 ++ + E++ A AL + +E + Q + EE+ IARELHD + Q L+ +KM +S Sbjct: 418 MLRDVTERVRAETALKQSREELRDLSANLQNVREEEKTRIARELHDDLGQQLTALKMDLS 477 Query: 415 CLQMQGDALPES---SRELLSQIRNELNASWAQLRELLTTFRL-QLTEPGLRPALEASCE 470 +++ + RE L + ++++ A +R + R L + GL PA+E Sbjct: 478 AVELGLAGVVAPNTGVREQLGGMHGLIDSTVASVRRIAADLRPVMLDDLGLVPAIEWLAN 537 Query: 471 EYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQV 530 +++ ++ V D A L +I +EAL+N +HS A+ V + + + Sbjct: 538 DFTRRYRITVDRDIAPVDTAFTGVGATTLFRIVQEALTNVARHSDATNVQLALKLEEGYC 597 Query: 531 KLTVQDNGCGVPENAIR---SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEK 587 L + DNG G PENA +G+I +R+RA G V R G + V Sbjct: 598 VLRIADNGHGAPENARNEQDRPSFGLIGIRERAHMFEGTVTVDNRPGAGFTITVALPLHA 657 >UniRef50_C0Z627 Two-component sensor histidine kinase n=3 Tax=Bacillales RepID=C0Z627_BREBN Length = 382 Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 8/251 (3%) Query: 335 ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATI 394 + G L + + +Q + L E+ + V EER + Sbjct: 130 ELGVDEVGELGWQINRLASQWEEQVASLQRLSNH------NAALAEQLKHAAVTEERQRL 183 Query: 395 ARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRL 454 ARELHD+++Q L + M + ++ + P+ + + + + A+ A++R LL R Sbjct: 184 ARELHDAVSQQLFAIAMTTAAMKRLVEKNPQRAAQQIELVEEMAAAAQAEMRALLLHLRP 243 Query: 455 Q-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKH 513 L L+ A+ +E + K + + + +PS HL +I +E+LSN L+H Sbjct: 244 ATLQNKSLKEAILELLDELTRKNTMQLTWEIE-DVEGLPSGIEDHLFRILQESLSNTLRH 302 Query: 514 SQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRE 573 ++A+++ V + QV+L V D+G G + + YG+ M++R + G + Sbjct: 303 ARATQIAVKLFTLQEQVRLRVTDDGVGFDPDGEKMTSYGLRSMQERVAEVGGSMEIYSAI 362 Query: 574 SGGTEVVVTFI 584 GT++ V Sbjct: 363 GKGTQIEVRIP 373 Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 74/245 (30%), Gaps = 14/245 (5%) Query: 157 RVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTAL 216 V L+ + + L + L A + + R G +E+ LG + Sbjct: 84 VVSLPAGVLVALIISYIIGNLLKKRLSVLWEAAMKLGRGMLSYRVPELGVDEVGELGWQI 143 Query: 217 NNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQ 276 N ++++ E++V H + L A + E V L Sbjct: 144 NRLASQ-------WEEQVASLQRLSNHNAALAEQLKHAAVTEERQRLARELHDAVSQQLF 196 Query: 277 NLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGD------RGTTL 330 + + R+ + + + Q+ +M + L + L Sbjct: 197 AIAMTTAAMKRLVEKNPQRAAQQIELVEEMAAAAQAEMRALLLHLRPATLQNKSLKEAIL 256 Query: 331 KWRLADSHTQYGILLATLPQGRHL-SHDQQQLVDTLVEQLTATLALDRHQERQQQLIVME 389 + + L + L S + L L E L+ TL R + +L ++ Sbjct: 257 ELLDELTRKNTMQLTWEIEDVEGLPSGIEDHLFRILQESLSNTLRHARATQIAVKLFTLQ 316 Query: 390 ERATI 394 E+ + Sbjct: 317 EQVRL 321 >UniRef50_C6D0G7 GAF sensor signal transduction histidine kinase n=29 Tax=Bacillales RepID=C6D0G7_PAESJ Length = 559 Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats. Identities = 68/416 (16%), Positives = 138/416 (33%), Gaps = 39/416 (9%) Query: 205 GRNEMAML---GTALNNMSAELAESYAVLEQRVQEKTAGLE--HKNQILSFLW----QAN 255 G++ +L + S E + ++ + + + L+ Sbjct: 131 GKDRFGLLNIAQAGKEHFSEEELALLQAVALQIGTAINRIRLYQTQERNAMLYAKLGDVI 190 Query: 256 RRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDT-----------------------D 292 +R++ + + + + + ++ L +YD + Sbjct: 191 QRINGVQDVNQLPIKAVQYIGDEFGWPNVSLFMYDGQQLSLRALYSSGKLTKEWQTLAVE 250 Query: 293 DEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGR 352 + + + + + + + L + G++ + P R Sbjct: 251 AAGPIEASLRDNRIIIESSCMEGNELDSVGIPPFRSAAAIPLRVRNRTIGVMFISSPDQR 310 Query: 353 HLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQ 412 + + +L + T + R E + +L MEER +AR+LHDS+ Q + + Sbjct: 311 QFDDLNEDFMYSLGDHFTLCVENLRIYEHRSELARMEERNRMARDLHDSVVQKVFSLSFL 370 Query: 413 VSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEY 472 + + LS+I+ + ++R L+ E GL PAL+ Sbjct: 371 AKGAENVLAGRDPVVQRSLSEIQQLSQEALKEMRTLIWQLHPAGLENGLLPALKQY---- 426 Query: 473 SAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTV-AQNDNQVK 531 + + +P +I +EAL+N KHS + + Q D Sbjct: 427 GQGLNLTIYDRTDG-VQELPRAIEEAFWRIGQEALNNVRKHSGRETAYIRLNKQQDGAAV 485 Query: 532 LTVQDNGCGVPENAIRSN-HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPE 586 L V+D G G + + GM MR+RA++L G + T V T E Sbjct: 486 LEVRDEGTGFQVDRKKGRQTMGMRSMRERAETLGGSLSITSGRGKPTIVRATIPLE 541 Score = 55.3 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 23/179 (12%), Positives = 49/179 (27%), Gaps = 32/179 (17%) Query: 242 EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTD--------D 293 E + L+ L + L++ + + L VL L +T + + D D Sbjct: 4 EVRVSELAALKEIAEMLNTTNDMDQMLGDVLAKLLEVTDFTTGWIFLIDDDIPGNTCAAH 63 Query: 294 EENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTL----------------------- 330 T + C R + Sbjct: 64 HNLPPALTAGNYALMCGEDCWCVERYRQRKLTHAVNIIECKRITYAVSHQLGDTEGITHH 123 Query: 331 -KWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVM 388 L ++G+L H S ++ L+ + Q+ + R + Q++ ++ Sbjct: 124 ATVPLKAGKDRFGLLNIAQAGKEHFSEEELALLQAVALQIGTAINRIRLYQTQERNAML 182 >UniRef50_B2TG29 PAS/PAC sensor signal transduction histidine kinase n=2 Tax=Burkholderia RepID=B2TG29_BURPP Length = 370 Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats. Identities = 67/322 (20%), Positives = 122/322 (37%), Gaps = 6/322 (1%) Query: 279 TLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSH 338 + I+ D + F D+ L + + Sbjct: 49 LGAQRIKGYSPDEIVGRHFSRFYTDEDIAAGKPAQLLATAAWQGRVEDEGWRVRKDESRL 108 Query: 339 TQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIAREL 398 ++ A + L + D + L Q E+ IAREL Sbjct: 109 WANVVITAVHDEQGDLLGFAKITRDMTERRRLEDLEHASAASALVQQARENEQRRIAREL 168 Query: 399 HDSIAQSLSCMKMQVSCLQMQGDAL-PESSRELLSQIRNELNA---SWAQLRELLTTFRL 454 HD + Q ++ +KM ++ + + E+ R L +R + +R + R Sbjct: 169 HDDLGQQITALKMTLALHETELARHFSEAGRARLGSVREMADQLDAMATSMRRIAADLRP 228 Query: 455 Q-LTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKH 513 L + GL ALE E + ++G PV+ + + AI L ++ +EAL+N +H Sbjct: 229 PMLDDLGLEAALEWMTEGFEQRYGVPVRCEISPDVLCLNDLAAISLYRVIQEALTNVARH 288 Query: 514 SQASEVVVTVAQNDNQVKLTVQDNGCGVP-ENAIRSNHYGMIIMRDRAQSLRGDCRVRRR 572 ++A+EV VT++ +D L + D+G G+P A R++ +G++ MR+R L G V Sbjct: 289 ARANEVFVTLSADDRHYHLQIHDDGVGLPKAPAPRADCFGLLGMRERISQLGGVLSVDSI 348 Query: 573 ESGGTEVVVTFIPEKTFTDVQG 594 G + + + Q Sbjct: 349 PGRGVTITARVPLARVLVESQP 370 >UniRef50_A1WYG6 Histidine kinase n=1 Tax=Halorhodospira halophila SL1 RepID=A1WYG6_HALHL Length = 475 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 82/394 (20%), Positives = 145/394 (36%), Gaps = 37/394 (9%) Query: 242 EHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFT 301 + + L L L E L L L T +R++D E + Sbjct: 70 ASEQEALHLLSALGVVAAQARDLDELLQGSLERLIEQTGATAAAVRLFDEQGSLRLVEAS 129 Query: 302 ------CQPDMTCDDKGCQLCP---------------------RGVLPVGDRGTTLKWRL 334 + GC LP + L + Sbjct: 130 GLNAGFIDAERRQPAAGCSCAIAGERGTVQFRGDLRQCIRRSGCNPLPNRPQLAMLAVPI 189 Query: 335 AD-SHTQYGILLATLPQGRHLSH-DQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERA 392 D + + GI L ++++ + QL A +A R + R Q + EER Sbjct: 190 LDPAGERVGIYNIYLEPSEAQRWMHPPRMLEWIGHQLGAAIARVRDEYRSHQGALQEERN 249 Query: 393 TIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSR--ELLSQIRNELNASWAQLRELLT 450 +A ELHD++AQ ++ ++++V L+ + +++ L +R L+ + Q+R ++ Sbjct: 250 LLAHELHDTVAQEVATLRLRVRQLEERARGDADTAALLAPLEDLRTRLDHTNDQVRTVMQ 309 Query: 451 TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNA 510 FR Q L AL + G V+L ++ P + + +H+ +I EALSNA Sbjct: 310 QFRTQALGTPLETALSRLANRFRRDSGIEVRLIHRWPELALGEREQLHIHRIVEEALSNA 369 Query: 511 LKHSQASEVVVTVAQNDNQVKLTVQDNGCGV------PENAIRSNHYGMIIMRDRAQSLR 564 H A V + + + L ++D+GCG + S +G+ MR+RA+ L Sbjct: 370 WHHGGARNVRLQLETPGGDLCLLIEDDGCGFVVDDVPDSDPAESRGHGLRGMRERARHLG 429 Query: 565 GDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE 598 V GT + + + T H+ Sbjct: 430 AILTVESDPGQGTTIHLRLPQPQRLTWTTKSLHQ 463 >UniRef50_C4XNR7 Two-component sensor histidine kinase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR7_DESMR Length = 482 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 80/416 (19%), Positives = 143/416 (34%), Gaps = 24/416 (5%) Query: 185 LLAMASAVSHRDFTQRANISGRNEMAMLGTALNN-MSAELAESYAVLEQRVQEKTAGLEH 243 L +A+ R + +L + A L R T Sbjct: 71 LHEIAAKARRGSDDIRYIMIVDYAGEILAHTFGDGFPAGLPLELPPGLPRSNAATGEPGG 130 Query: 244 KNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLT--LLRDIELRVYDTDDEENHQEFT 301 + R + P E + PV G L + ++R + +N T Sbjct: 131 -----EAAYAVTRYRSNEGPFREVVVPVERGAVGYVRVGLTEQDMRHILEQNIKNFSLIT 185 Query: 302 CQPDMTCDDKGCQLCPRGVLPVGDRGTT----------LKWRLADSHTQYGILLATLPQG 351 + +L R V P+ ++ D + A Sbjct: 186 LVVCLLAAVVATRLAYRIVHPIDQLAQAAGQIRQGNYGVRIPPDDQAEVGRLASAFNDMA 245 Query: 352 RHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKM 411 L+ + L R ++ + +ER I+RELHD QSL+ + Sbjct: 246 ATLTRKDDENEHLLTALRDKDARHVRLLQKVL-SVQEDERKRISRELHDEAGQSLASLLA 304 Query: 412 QVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQ-LTEPGLRPALEASCE 470 + L + S RE + Q+++ + LR++ R L + GL PA+ + Sbjct: 305 YLQLL--MAGEVTSSQREAIGQLKSLVVEILGGLRKMAVELRPPALDDLGLVPAMAKYVD 362 Query: 471 EYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQV 530 ++ + + + A+ L +I +E+L+N +H++A V V +A + Sbjct: 363 GFALQRDLTAIFAPEDDNPELDPAVALALYRILQESLTNVARHAEAKAVRVELAAEGGDI 422 Query: 531 KLTVQDNGCGVPENAIRSN--HYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 LTV D+G G A+ + G+ M +RA+ L G ++ R GT V V Sbjct: 423 ALTVSDDGRGFDAAALPAGEESLGIYGMMERAELLGGTFQMTSRPGQGTTVRVALP 478 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 79/253 (31%), Gaps = 9/253 (3%) Query: 139 SGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFT 198 E I+ L+ V+ + A++ R++ P QL A + ++ Sbjct: 168 QDMRHILEQNIKNFSLITLVVCLLAAVVATRLAY----RIVHPIDQLAQAAGQIRQGNYG 223 Query: 199 QRANISGRNEMAMLGTALNNMSAEL---AESYAVLEQRVQEKTAGLEHKNQILSFLWQAN 255 R + E+ L +A N+M+A L + L +++K A Q + + + Sbjct: 224 VRIPPDDQAEVGRLASAFNDMAATLTRKDDENEHLLTALRDKDARHVRLLQKVLSVQEDE 283 Query: 256 RRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQL 315 R+ SR E + + L L LL E+ + E Q + ++ + + Sbjct: 284 RKRISRELHDEAGQSLASLLAYLQLLMAGEV--TSSQREAIGQLKSLVVEILGGLRKMAV 341 Query: 316 CPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLAL 375 R + D L A + L L +L Sbjct: 342 ELRPPALDDLGLVPAMAKYVDGFALQRDLTAIFAPEDDNPELDPAVALALYRILQESLTN 401 Query: 376 DRHQERQQQLIVM 388 + + V Sbjct: 402 VARHAEAKAVRVE 414 >UniRef50_B5JFN8 Histidine kinase domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN8_9BACT Length = 403 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 9/270 (3%) Query: 320 VLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQ 379 + + ++ D T + LL + +++ + L A ++ + Sbjct: 137 WIFLSRFMWGGWMQIDDQVTMFSGLLFSSMMFYIFRRERESRSKAVALTLDLDEANEKLR 196 Query: 380 E---RQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRN 436 + ++L +ER IARE+HD+I SL+ + MQ+ + D+ E ++ L + + Sbjct: 197 AFSGQIEELAATQERNRIAREIHDTIGHSLTVVNMQLETSKALIDSDKEKAKRFLEKAQE 256 Query: 437 ELNASWAQLRELLTTFR-LQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQ 495 +R + + R L L ALE S G + + + + Sbjct: 257 VTRQGLTDVRSSVASLRSSPLDGKSLPGALEGMMSA-SFGGGVKTRFELKGEVAALNPAS 315 Query: 496 AIHLLQIAREALSNALKHSQASEVVVTVAQN-DNQVKLTVQDNGCGVPENAIRSNHYGMI 554 L + A+EAL+N KH+ ASEV +++ + VKL V DNG G + +G++ Sbjct: 316 EAALYRSAQEALTNVRKHADASEVKLSLDFSFPECVKLVVADNGKG---SEKVEGGFGIM 372 Query: 555 IMRDRAQSLRGDCRVRRRESGGTEVVVTFI 584 +R+R Q L G+ RV G E+ ++ Sbjct: 373 GIRERIQLLDGEMRVSTSPGQGLELSLSLP 402 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.144 0.412 Lambda K H 0.267 0.0441 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,179,005,620 Number of Sequences: 3077464 Number of extensions: 143475104 Number of successful extensions: 933846 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 14380 Number of HSP's successfully gapped in prelim test: 31702 Number of HSP's that attempted gapping in prelim test: 813522 Number of HSP's gapped (non-prelim): 89460 length of query: 598 length of database: 1,040,396,356 effective HSP length: 135 effective length of query: 463 effective length of database: 624,938,716 effective search space: 289346625508 effective search space used: 289346625508 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 96 (41.5 bits)