BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (454 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P25888 ATP-dependent RNA helicase rhlE n=363 Tax=root R... 916 0.0 UniRef50_C1D673 RhlE3 n=1 Tax=Laribacter hongkongensis HLHK9 Rep... 523 e-147 UniRef50_Q0HYG8 DEAD/DEAH box helicase domain protein n=78 Tax=B... 508 e-142 UniRef50_Q126W4 DEAD/DEAH box helicase-like n=153 Tax=Bacteria R... 504 e-141 UniRef50_C5CU85 DEAD/DEAH box helicase domain protein n=10 Tax=C... 499 e-140 UniRef50_B7VQT9 ATP-dependent RNA helicase n=15 Tax=Bacteria Rep... 479 e-134 UniRef50_Q0AFH3 DEAD/DEAH box helicase domain protein n=1 Tax=Ni... 447 e-124 UniRef50_Q82T78 RhlE; ATP-dependent RNA helicase RhlE n=1 Tax=Ni... 445 e-123 UniRef50_Q3AZR1 DEAD/DEAH box helicase-like n=2 Tax=Synechococcu... 443 e-123 UniRef50_C7PD17 DEAD/DEAH box helicase domain protein n=139 Tax=... 434 e-120 UniRef50_C4ZJL9 DEAD/DEAH box helicase domain protein n=1 Tax=Th... 432 e-119 UniRef50_Q12QV2 DEAD/DEAH box helicase-like protein n=27 Tax=Gam... 428 e-118 UniRef50_A0RP33 Putative ATP-dependent RNA helicase RhlE n=2 Tax... 428 e-118 UniRef50_Q2SZW4 ATP-dependent RNA helicase RhlE n=104 Tax=Proteo... 425 e-117 UniRef50_Q485D3 ATP-dependent RNA helicase, DEAD box family n=24... 422 e-116 UniRef50_D2QGG1 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 419 e-115 UniRef50_Q0B215 DEAD/DEAH box helicase domain protein n=8 Tax=Pr... 418 e-115 UniRef50_A9GRX1 DeaD2 protein n=5 Tax=Bacteria RepID=A9GRX1_SORC5 418 e-115 UniRef50_B0TQ71 DEAD/DEAH box helicase domain protein n=31 Tax=G... 415 e-114 UniRef50_Q15T34 DEAD/DEAH box helicase-like n=1 Tax=Pseudoaltero... 404 e-111 UniRef50_B0SEU1 Superfamily II DNA and RNA helicase n=5 Tax=cell... 401 e-110 UniRef50_A0KXT6 DEAD/DEAH box helicase domain protein n=61 Tax=G... 399 e-109 UniRef50_A7K2L3 ATP-dependent RNA helicase n=17 Tax=Vibrionaceae... 399 e-109 UniRef50_A0KZD5 DEAD/DEAH box helicase domain protein n=22 Tax=A... 399 e-109 UniRef50_B8ILJ8 DEAD/DEAH box helicase domain protein n=10 Tax=A... 395 e-108 UniRef50_C4G990 Putative uncharacterized protein n=1 Tax=Shuttle... 394 e-108 UniRef50_Q2BP56 Putative ATP-dependent RNA helicase n=1 Tax=Nept... 394 e-108 UniRef50_C7LND0 DEAD/DEAH box helicase domain protein n=1 Tax=De... 392 e-107 UniRef50_B3QTY3 DEAD/DEAH box helicase domain protein n=1 Tax=Ch... 391 e-107 UniRef50_B8FPB9 DEAD/DEAH box helicase domain protein n=12 Tax=B... 391 e-107 UniRef50_D2QWU0 DEAD/DEAH box helicase domain protein n=1 Tax=Pi... 390 e-107 UniRef50_A9KIB7 DEAD/DEAH box helicase domain protein n=1 Tax=Cl... 389 e-106 UniRef50_A9NFK0 ATP-dependent RNA helicase, superfamily II n=1 T... 389 e-106 UniRef50_Q30SZ2 DEAD/DEAH box helicase-like protein n=2 Tax=Camp... 387 e-106 UniRef50_B4WCQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Br... 387 e-106 UniRef50_C9RPH4 DEAD/DEAH box helicase domain protein n=1 Tax=Fi... 386 e-106 UniRef50_C5TNR4 Dead/deah box helicase n=8 Tax=Neisseriaceae Rep... 386 e-105 UniRef50_D1B384 DEAD/DEAH box helicase domain protein n=1 Tax=Su... 385 e-105 UniRef50_A7K1S7 ATP-dependent RNA helicase n=13 Tax=Vibrionales ... 385 e-105 UniRef50_C5SI45 DEAD/DEAH box helicase domain protein n=1 Tax=As... 383 e-104 UniRef50_A7IK90 DEAD/DEAH box helicase domain protein n=36 Tax=A... 381 e-104 UniRef50_C6XMJ7 DEAD/DEAH box helicase domain protein n=23 Tax=B... 380 e-104 UniRef50_A8H2J8 DEAD/DEAH box helicase domain protein n=34 Tax=G... 378 e-103 UniRef50_C6WW85 DEAD/DEAH box helicase domain protein n=1 Tax=Me... 375 e-102 UniRef50_C1AE59 ATP-dependent RNA helicase RhlE n=1 Tax=Gemmatim... 375 e-102 UniRef50_A9M0D7 ATP-dependent RNA helicase, putative n=21 Tax=Ne... 374 e-102 UniRef50_Q11TW3 Possible ATP-dependent RNA helicase n=10 Tax=Bac... 370 e-101 UniRef50_Q2YZZ9 Putative uncharacterized protein n=2 Tax=Bacteri... 370 e-101 UniRef50_C3RH47 ATP-dependent RNA helicase RhlE n=2 Tax=Bacteria... 368 e-100 UniRef50_B6R5V0 ATP-dependent rna helicase, dead/deah box family... 366 1e-99 UniRef50_C6C1F3 DEAD/DEAH box helicase domain protein n=2 Tax=De... 366 1e-99 UniRef50_A5G1U8 DEAD/DEAH box helicase domain protein n=7 Tax=Al... 365 3e-99 UniRef50_Q7UJ92 Putative ATP-dependent RNA helicase rhlE n=1 Tax... 365 3e-99 UniRef50_Q2NB74 DNA and RNA helicase n=7 Tax=Alphaproteobacteria... 360 4e-98 UniRef50_Q2BMZ1 ATP-dependent RNA helicase n=1 Tax=Neptuniibacte... 358 2e-97 UniRef50_C4XQY7 ATP-dependent RNA helicase n=7 Tax=Deltaproteoba... 358 2e-97 UniRef50_B2S5R2 ATP-dependent RNA helicase, DEAD/DEAH box family... 358 2e-97 UniRef50_B3PER7 ATP-dependent RNA helicase, DEAD box family n=12... 358 3e-97 UniRef50_A2U4F0 DEAD/DEAH box helicase n=4 Tax=Flavobacteriales ... 358 3e-97 UniRef50_A1B2U6 DEAD/DEAH box helicase domain protein n=23 Tax=R... 357 7e-97 UniRef50_D2MPZ3 Putative ATP-dependent RNA helicase RhlE n=1 Tax... 355 2e-96 UniRef50_C6ATS7 DEAD/DEAH box helicase domain protein n=15 Tax=A... 355 2e-96 UniRef50_B1ZWV2 DEAD/DEAH box helicase domain protein n=9 Tax=Ve... 355 2e-96 UniRef50_Q0G0P8 Superfamily II DNA and RNA helicase n=1 Tax=Fulv... 354 3e-96 UniRef50_B5EAF1 DEAD/DEAH box helicase domain protein n=3 Tax=De... 352 1e-95 UniRef50_C7N178 DNA/RNA helicase, superfamily II n=1 Tax=Slackia... 349 2e-94 UniRef50_C8WFI7 DEAD/DEAH box helicase domain protein n=3 Tax=Zy... 348 2e-94 UniRef50_C7JBN9 DNA/RNA helicase n=19 Tax=cellular organisms Rep... 348 2e-94 UniRef50_D2L498 DEAD/DEAH box helicase domain protein n=1 Tax=De... 348 2e-94 UniRef50_UPI0000E87E35 putative ATP-dependent RNA helicase prote... 348 3e-94 UniRef50_B2UL73 DEAD/DEAH box helicase domain protein n=1 Tax=Ak... 346 8e-94 UniRef50_D0WJ40 Putative ATP-dependent RNA helicase RhlE n=1 Tax... 343 7e-93 UniRef50_C7MN05 DNA/RNA helicase, superfamily II n=1 Tax=Cryptob... 343 1e-92 UniRef50_Q2RQT0 DEAD/DEAH box helicase n=59 Tax=root RepID=Q2RQT... 342 2e-92 UniRef50_A5UZK3 DEAD/DEAH box helicase domain protein n=8 Tax=Ba... 340 5e-92 UniRef50_A4EAF2 Putative uncharacterized protein n=4 Tax=Collins... 338 2e-91 UniRef50_C6Q9Z2 DEAD/DEAH box helicase domain protein n=1 Tax=Hy... 338 3e-91 UniRef50_B5ZGC1 DEAD/DEAH box helicase domain protein n=3 Tax=Ac... 338 3e-91 UniRef50_A1TMG8 DEAD/DEAH box helicase domain protein n=4 Tax=ce... 337 4e-91 UniRef50_B5JNP6 DEAD/DEAH box helicase domain protein n=1 Tax=Ve... 337 6e-91 UniRef50_Q0BSI7 ATP-dependent RNA helicase n=54 Tax=Alphaproteob... 336 1e-90 UniRef50_Q480Z7 ATP-dependent RNA helicase, DEAD box family n=2 ... 336 1e-90 UniRef50_C8WL27 DEAD/DEAH box helicase domain protein n=3 Tax=Eg... 333 1e-89 UniRef50_A3EUK2 Putative ATP-dependent helicase n=2 Tax=Leptospi... 330 9e-89 UniRef50_B6BTD3 Dead/deah box helicase domain protein n=1 Tax=be... 328 4e-88 UniRef50_Q01PH0 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 327 4e-88 UniRef50_D2QS74 DEAD/DEAH box helicase domain protein n=1 Tax=Sp... 327 5e-88 UniRef50_C7PAU3 DEAD/DEAH box helicase domain protein n=7 Tax=Ba... 327 6e-88 UniRef50_A3WBD4 DNA and RNA helicase n=1 Tax=Erythrobacter sp. N... 327 6e-88 UniRef50_C8WWM6 DEAD/DEAH box helicase domain protein n=1 Tax=Al... 326 1e-87 UniRef50_Q3BYG2 ATP-dependent RNA helicase n=18 Tax=Proteobacter... 324 5e-87 UniRef50_B8JG82 DEAD/DEAH box helicase domain protein n=8 Tax=Ba... 323 8e-87 UniRef50_A8IAJ3 Helicase n=4 Tax=Alphaproteobacteria RepID=A8IAJ... 322 2e-86 UniRef50_A5FST0 DEAD/DEAH box helicase domain protein n=5 Tax=De... 321 4e-86 UniRef50_Q28T45 DEAD/DEAH box helicase-like protein n=18 Tax=Alp... 320 7e-86 UniRef50_C6HUU6 Putative ATP-dependent helicase n=1 Tax=Leptospi... 318 3e-85 UniRef50_Q0K893 ATP-dependent RNA helicase n=129 Tax=Proteobacte... 317 4e-85 UniRef50_B2V9H9 DEAD/DEAH box helicase domain protein n=4 Tax=Hy... 317 8e-85 UniRef50_Q7NHM7 Gll2508 protein n=1 Tax=Gloeobacter violaceus Re... 315 2e-84 UniRef50_Q11WD3 Possible ATP-dependent RNA helicase n=8 Tax=Sphi... 315 2e-84 UniRef50_B6IS62 DEAD/DEAH box helicase protein n=1 Tax=Rhodospir... 315 2e-84 UniRef50_Q6AMK6 Probable ATP-dependent RNA helicase n=1 Tax=Desu... 314 4e-84 UniRef50_A6V0P4 ATP-dependent RNA helicase RhlB n=15 Tax=Pseudom... 313 7e-84 UniRef50_C6VX00 DEAD/DEAH box helicase domain protein n=1 Tax=Dy... 313 1e-83 UniRef50_B4SPP3 DEAD/DEAH box helicase domain protein n=16 Tax=c... 312 1e-83 UniRef50_B0SYC6 DEAD/DEAH box helicase domain protein n=33 Tax=A... 311 3e-83 UniRef50_Q17W71 ATP-dependent RNA helicase n=19 Tax=Helicobacter... 311 4e-83 UniRef50_B5ZLE2 DEAD/DEAH box helicase domain protein n=2 Tax=Gl... 311 4e-83 UniRef50_A6M3F5 DEAD/DEAH box helicase domain protein n=5 Tax=Cl... 311 5e-83 UniRef50_Q1MY97 DEAD/DEAH box helicase-like protein n=1 Tax=Berm... 310 1e-82 UniRef50_Q3SF48 DEAD/DEAH box helicase n=7 Tax=cellular organism... 309 1e-82 UniRef50_A9ENG9 ATP-independent RNA helicase n=18 Tax=Bacteria R... 308 3e-82 UniRef50_C8W8S2 DEAD/DEAH box helicase domain protein n=2 Tax=At... 307 4e-82 UniRef50_C7PCT4 DEAD/DEAH box helicase domain protein n=20 Tax=B... 307 5e-82 UniRef50_A0Z0M4 ATP-dependent RNA helicase n=1 Tax=marine gamma ... 306 7e-82 UniRef50_C1D891 Putative ATP-dependent RNA helicase protein n=1 ... 306 1e-81 UniRef50_A8PM28 Dead/deah box helicase n=1 Tax=Rickettsiella gry... 305 3e-81 UniRef50_Q4FSS4 Possible ATP-dependent DEAD/DEAH box RNA-helicas... 304 3e-81 UniRef50_A6DHU9 DEAD/DEAH box helicase-like protein n=1 Tax=Lent... 304 4e-81 UniRef50_A3I1F5 DEAD/DEAH box helicase-like protein n=1 Tax=Algo... 304 6e-81 UniRef50_A8ETV2 Putative ATP-dependent RNA helicase RhlE n=1 Tax... 303 7e-81 UniRef50_B9Y818 Putative uncharacterized protein n=1 Tax=Holdema... 303 1e-80 UniRef50_C8PWG8 Cold-shock DEAD box protein A homolog n=1 Tax=En... 302 1e-80 UniRef50_A0LLL9 DEAD/DEAH box helicase domain protein n=2 Tax=De... 302 1e-80 UniRef50_D2QD85 DEAD/DEAH box helicase domain protein n=1 Tax=Sp... 302 2e-80 UniRef50_Q7MC00 DNA and RNA helicase n=57 Tax=Gammaproteobacteri... 302 2e-80 UniRef50_Q1N6E2 ATP-dependent RNA helicase n=1 Tax=Bermanella ma... 301 3e-80 UniRef50_A4C1L2 ATP-dependent RNA helicase n=2 Tax=Polaribacter ... 301 3e-80 UniRef50_UPI0001C33831 DNA/RNA helicase, superfamily II n=3 Tax=... 301 3e-80 UniRef50_A6KZW9 ATP-dependent RNA helicase n=51 Tax=Bacteria Rep... 300 6e-80 UniRef50_C6XHW2 ATP dependent RNA helicase protein n=1 Tax=Candi... 300 9e-80 UniRef50_Q3IJ60 ATP-dependent RNA helicase, cold shock protein A... 300 1e-79 UniRef50_A6FEC9 ATP-dependent RNA helicase, DEAD box family n=1 ... 299 1e-79 UniRef50_A6T3R2 ATP-dependent RNA helicase n=86 Tax=Bacteria Rep... 299 1e-79 UniRef50_D2LSA7 DEAD/DEAH box helicase domain protein n=1 Tax=Ba... 299 2e-79 UniRef50_D0WTV5 ATP-dependent RNA helicase, DEAD box family n=1 ... 299 2e-79 UniRef50_Q725W5 ATP-dependent RNA helicase, DEAD/DEAH family n=3... 298 2e-79 UniRef50_Q88NB7 ATP-dependent RNA helicase rhlB n=50 Tax=Gammapr... 298 3e-79 UniRef50_Q81IT9 DEAD-box ATP-dependent RNA helicase cshA n=84 Ta... 298 3e-79 UniRef50_C8P265 DEAD/DEAH family ATP-dependent RNA helicase n=1 ... 297 4e-79 UniRef50_A6GSW1 Putative ATP-dependent RNA helicase n=1 Tax=Limn... 297 5e-79 UniRef50_Q3AFI3 ATP-dependent RNA helicase, DEAD box family n=1 ... 297 6e-79 UniRef50_D1BSR4 DEAD/DEAH box helicase domain protein n=5 Tax=Ac... 297 6e-79 UniRef50_C5RIK3 DEAD/DEAH box helicase domain protein n=3 Tax=Cl... 296 7e-79 UniRef50_Q0AVQ9 ATP-dependent RNA helicase n=1 Tax=Syntrophomona... 296 8e-79 UniRef50_C0Q9A4 DeaD n=1 Tax=Desulfobacterium autotrophicum HRM2... 296 9e-79 UniRef50_C5EJJ1 DEAD/DEAH box helicase domain-containing protein... 296 9e-79 UniRef50_Q12UP5 Dead box RNA helicase n=4 Tax=Archaea RepID=Q12U... 296 1e-78 UniRef50_C5C5R9 DEAD/DEAH box helicase domain protein n=1 Tax=Be... 296 1e-78 UniRef50_Q5ZT20 ATP-dependent RNA helicase n=4 Tax=Legionella pn... 296 2e-78 UniRef50_Q1IMK6 DEAD/DEAH box helicase-like n=1 Tax=Candidatus K... 295 2e-78 UniRef50_A3ZWP8 ATP-dependent RNA helicase n=1 Tax=Blastopirellu... 295 2e-78 UniRef50_B0TII3 Dead/deah box helicase n=18 Tax=Bacteria RepID=B... 295 2e-78 UniRef50_C0ZI64 Putative ATP-dependent RNA helicase n=1 Tax=Brev... 295 2e-78 UniRef50_C0W1P0 Superfamily II helicase n=2 Tax=Actinomyces RepI... 295 2e-78 UniRef50_B9SM44 Dead box ATP-dependent RNA helicase, putative n=... 295 3e-78 UniRef50_D2V713 ATP-dependent RNA helicase n=1 Tax=Naegleria gru... 295 3e-78 UniRef50_A6VJ89 DEAD/DEAH box helicase domain protein n=5 Tax=Eu... 295 3e-78 UniRef50_D2QY81 DEAD/DEAH box helicase domain protein n=1 Tax=Pi... 294 4e-78 UniRef50_Q30YG9 DEAD/DEAH box helicase-like n=9 Tax=Deltaproteob... 294 4e-78 UniRef50_Q30PP0 DEAD/DEAH box helicase-like protein n=11 Tax=Bac... 294 5e-78 UniRef50_B0SU57 ATP-dependent RNA helicase, DEAD-box family (Dea... 293 7e-78 UniRef50_C6E4K1 DEAD/DEAH box helicase domain protein n=9 Tax=Pr... 293 7e-78 UniRef50_Q11UP8 ATP-dependent RNA helicase (Cold-shock DEAD-box ... 293 8e-78 UniRef50_C1IBN1 DEAD-box ATP dependent DNA helicase n=1 Tax=Clos... 293 8e-78 UniRef50_C5S7U5 DEAD/DEAH box helicase domain protein n=1 Tax=Al... 293 9e-78 UniRef50_A6TTG0 DEAD/DEAH box helicase domain protein n=28 Tax=F... 293 1e-77 UniRef50_D2RJY3 DEAD/DEAH box helicase domain protein n=2 Tax=Fi... 292 1e-77 UniRef50_D1B4W7 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 292 2e-77 UniRef50_Q8YXJ0 ATP-dependent RNA helicase n=24 Tax=Cyanobacteri... 292 2e-77 UniRef50_C1FAF2 ATP-dependent RNA helicase n=1 Tax=Acidobacteriu... 292 2e-77 UniRef50_P0A9P7 Cold-shock DEAD box protein A n=201 Tax=Bacteria... 291 2e-77 UniRef50_D1H3Q8 Whole genome shotgun sequence of line PN40024, s... 291 2e-77 UniRef50_O97032 DjVLGB (Fragment) n=1 Tax=Dugesia japonica RepID... 291 2e-77 UniRef50_C6WM51 DEAD/DEAH box helicase domain protein n=83 Tax=A... 291 3e-77 UniRef50_Q11039 Cold-shock DEAD box protein A homolog n=27 Tax=B... 291 3e-77 UniRef50_P44586 Cold-shock DEAD box protein A homolog n=29 Tax=P... 291 3e-77 UniRef50_C4R557 RNA helicase in the DEAD-box family, necessary f... 291 4e-77 UniRef50_C9RIQ5 DEAD/DEAH box helicase domain protein n=1 Tax=Fi... 291 4e-77 UniRef50_D1I3Q7 Whole genome shotgun sequence of line PN40024, s... 291 5e-77 UniRef50_A2SJY2 Putative ATP-dependent RNA helicase n=1 Tax=Meth... 290 5e-77 UniRef50_B8FMI0 DEAD/DEAH box helicase domain protein n=1 Tax=De... 290 6e-77 UniRef50_B4U778 DEAD/DEAH box helicase domain protein n=2 Tax=Aq... 290 6e-77 UniRef50_A6DML6 ATP-dependent RNA helicase n=1 Tax=Lentisphaera ... 289 1e-76 UniRef50_Q9M2F9 DEAD-box ATP-dependent RNA helicase 52 n=13 Tax=... 289 1e-76 UniRef50_A4SWL3 DEAD/DEAH box helicase domain protein n=5 Tax=Pr... 289 1e-76 UniRef50_Q5L3G9 DEAD-box ATP-dependent RNA helicase cshA n=94 Ta... 289 1e-76 UniRef50_Q65N62 DEAD-box ATP-dependent RNA helicase cshA n=135 T... 289 1e-76 UniRef50_B1VFV5 ATP-dependent RNA helicase n=35 Tax=cellular org... 289 2e-76 UniRef50_Q1QAQ0 DEAD/DEAH box helicase-like n=5 Tax=Gammaproteob... 288 2e-76 UniRef50_B7P029 Vasa n=9 Tax=Coelomata RepID=B7P029_9BIVA 288 2e-76 UniRef50_D1AZN5 DEAD/DEAH box helicase domain protein n=2 Tax=Ca... 288 2e-76 UniRef50_D2B0M6 Putative uncharacterized protein n=1 Tax=Strepto... 288 3e-76 UniRef50_C0YHR5 ATP-dependent RNA helicase n=1 Tax=Chryseobacter... 288 3e-76 UniRef50_C5LBR0 RNA helicase, putative n=4 Tax=Perkinsus marinus... 288 4e-76 UniRef50_Q9P7C7 Pre-mRNA-processing ATP-dependent RNA helicase p... 288 4e-76 UniRef50_UPI00016C471F RNA helicase DeaD n=1 Tax=Gemmata obscuri... 287 5e-76 UniRef50_Q5JKF2 DEAD-box ATP-dependent RNA helicase 40 n=11 Tax=... 287 5e-76 UniRef50_B0U160 DEAD-box subfamily ATP-dependent helicase n=18 T... 287 5e-76 UniRef50_C5CGQ2 DEAD/DEAH box helicase domain protein n=1 Tax=Ko... 287 6e-76 UniRef50_B9ZPI5 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 287 6e-76 UniRef50_B7VSB7 ATP-dependent RNA helicase n=74 Tax=Gammaproteob... 287 7e-76 UniRef50_Q7UG20 ATP-dependent RNA helicase n=2 Tax=Bacteria RepI... 287 7e-76 UniRef50_Q31AC4 DEAD/DEAH box helicase-like protein n=9 Tax=Proc... 286 8e-76 UniRef50_C7HXF4 DEAD/DEAH box helicase domain protein n=3 Tax=Ba... 286 8e-76 UniRef50_A4X1W4 DEAD/DEAH box helicase domain protein n=4 Tax=Ac... 286 1e-75 UniRef50_Q2PZC2 Vasa protein n=16 Tax=Neoptera RepID=Q2PZC2_APIME 286 1e-75 UniRef50_D2NRF7 Superfamily II DNA and RNA helicase n=3 Tax=Bact... 286 1e-75 UniRef50_Q6APU7 Related to ATP-dependent RNA helicase (RhlE) n=1... 286 1e-75 UniRef50_Q4TVV3 Probable ATP-dependent RNA helicase DDX46 n=18 T... 286 1e-75 UniRef50_C8PPF9 ATP-dependent RNA helicase DbpA n=1 Tax=Treponem... 286 1e-75 UniRef50_Q9SQV1 DEAD-box ATP-dependent RNA helicase 40 n=14 Tax=... 286 1e-75 UniRef50_Q3AX69 DEAD/DEAH box helicase-like n=18 Tax=cellular or... 286 1e-75 UniRef50_Q65XX1 Vasa-and belle-like helicase protein 1, isoform ... 286 2e-75 UniRef50_O26305 ATP-dependent RNA helicase, eIF-4A family n=1 Ta... 286 2e-75 UniRef50_Q0D1K3 Pre-mRNA-processing ATP-dependent RNA helicase p... 285 2e-75 UniRef50_Q0W8H7 ATP-dependent RNA helicase n=1 Tax=uncultured me... 285 2e-75 UniRef50_UPI0001C311D7 DEAD/DEAH box helicase domain protein n=1... 285 3e-75 UniRef50_A3FQ59 Putative uncharacterized protein n=1 Tax=Cryptos... 285 3e-75 UniRef50_C6X450 Cold-shock DEAD-box protein A n=1 Tax=Flavobacte... 285 3e-75 UniRef50_P42305 ATP-dependent RNA helicase dbpA n=99 Tax=Firmicu... 285 3e-75 UniRef50_D0WN23 ATP-dependent RNA helicase DeaD n=1 Tax=Actinomy... 285 3e-75 UniRef50_Q24I45 DEAD/DEAH box helicase family protein n=2 Tax=Te... 285 3e-75 UniRef50_C4LJP9 ATP-dependent RNA helicase n=15 Tax=Bacteria Rep... 284 4e-75 UniRef50_D0MZ17 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phy... 284 5e-75 UniRef50_A5FH88 DEAD/DEAH box helicase domain protein n=21 Tax=B... 284 6e-75 UniRef50_Q1J0S9 DEAD/DEAH box helicase-like protein n=2 Tax=Dein... 283 7e-75 UniRef50_A2QC74 ATP-dependent RNA helicase dbp2 n=35 Tax=Eukaryo... 283 7e-75 UniRef50_B6K0K2 ATP-dependent RNA helicase Prp11 n=1 Tax=Schizos... 283 8e-75 UniRef50_B7IA63 DEAD/DEAH box helicase n=17 Tax=Acinetobacter Re... 283 1e-74 UniRef50_D2I3Z4 Putative uncharacterized protein (Fragment) n=2 ... 283 1e-74 UniRef50_D1Y000 ATP-dependent RNA helicase DeaD family protein n... 283 1e-74 UniRef50_Q9GNP1 Vasa homolog n=25 Tax=Eumetazoa RepID=Q9GNP1_CIOSA 283 1e-74 UniRef50_Q5N7W4 DEAD-box ATP-dependent RNA helicase 30 n=3 Tax=O... 282 2e-74 UniRef50_Q0ST49 ATP-dependent RNA helicase, DEAD/DEAH box family... 282 2e-74 UniRef50_C5S9J5 DEAD/DEAH box helicase domain protein n=6 Tax=Ga... 282 2e-74 UniRef50_A6LBU1 ATP-dependent RNA helicase n=29 Tax=Bacteroidale... 282 2e-74 UniRef50_C9DQK7 VASA DEAD-box protein n=5 Tax=Chordata RepID=C9D... 281 2e-74 UniRef50_UPI00016C5336 ATP-dependent RNA helicase n=1 Tax=Gemmat... 281 3e-74 UniRef50_A5EYB1 ATP-dependent rna helicase Rhl n=1 Tax=Dicheloba... 281 3e-74 UniRef50_C1CWT4 Putative DEAD-box ATP-dependent RNA helicase 3 n... 281 4e-74 UniRef50_A8WWC4 C. briggsae CBR-VBH-1 protein n=2 Tax=Caenorhabd... 281 4e-74 UniRef50_C7RHZ9 DEAD/DEAH box helicase domain protein n=3 Tax=An... 281 4e-74 UniRef50_Q31EF0 ATP-dependent RNA helicase n=1 Tax=Thiomicrospir... 281 4e-74 UniRef50_Q4PFD9 Pre-mRNA-processing ATP-dependent RNA helicase P... 280 6e-74 UniRef50_O97031 DjVLGA n=1 Tax=Dugesia japonica RepID=O97031_DUGJA 280 6e-74 UniRef50_Q54IV3 Probable ATP-dependent RNA helicase ddx42 n=3 Ta... 280 6e-74 UniRef50_A0M3C7 RhlE-like DEAD box family ATP-dependent RNA heli... 280 7e-74 UniRef50_B7S475 Predicted protein n=2 Tax=Bacillariophyta RepID=... 280 7e-74 UniRef50_Q54CE0 Probable ATP-dependent RNA helicase ddx17 n=2 Ta... 280 7e-74 >UniRef50_P25888 ATP-dependent RNA helicase rhlE n=363 Tax=root RepID=RHLE_ECOLI Length = 454 Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust. Identities = 454/454 (100%), Positives = 454/454 (100%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL Sbjct: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM Sbjct: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK Sbjct: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI Sbjct: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV Sbjct: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI Sbjct: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA Sbjct: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 Query: 421 SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ Sbjct: 421 SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 >UniRef50_C1D673 RhlE3 n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D673_LARHH Length = 582 Score = 523 bits (1346), Expect = e-147, Method: Compositional matrix adjust. Identities = 276/460 (60%), Positives = 328/460 (71%), Gaps = 10/460 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF L L +LRA+ E GY EPTPIQ++AI VL GRDLMA+AQTGTGKTAGF LPLL Sbjct: 4 ISFADLQLVDPLLRAITEAGYTEPTPIQREAIAPVLAGRDLMAAAQTGTGKTAGFALPLL 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L PH R L+LTPTRELAAQ+GE++ +L + SLV+FGGV + PQ+ Sbjct: 64 QRLAATHPHPHPAGRPRGLVLTPTRELAAQVGESIATLGTHLPLTSLVIFGGVRVKPQIE 123 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L VD+L+ATPGRL+DL Q AV L VEILVLDEADRMLDMGFI D+R+VL LPA+ Sbjct: 124 ALTQRVDILIATPGRLIDLAKQEAVDLSGVEILVLDEADRMLDMGFIRDVRKVLKLLPAE 183 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSATF+DDIKALA+ LH+P +EV+ N+ ++ VT HVH VD+ RKRELL+H++ Sbjct: 184 RQNLLFSATFNDDIKALADTFLHDPQLVEVSPPNSTTELVTHHVHLVDRNRKRELLTHLV 243 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 WQQVLVFTRTKHGAN LAE L K GI +AAIHGNKSQGARTRAL++FK G +RVLV Sbjct: 244 ESRQWQQVLVFTRTKHGANRLAEVLAKGGIPAAAIHGNKSQGARTRALSEFKDGSLRVLV 303 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+DI ELP VVNYELPNVPEDYVHRIGRTGRA + GEA+SLVCVDE KLL DI Sbjct: 304 ATDIAARGIDISELPQVVNYELPNVPEDYVHRIGRTGRAGSPGEAVSLVCVDELKLLADI 363 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPI-----QNGRQQ-RGGGGRGQGGGRGQQQPRRGE 414 E + + IP+ PG+E D S+ +P+ Q GRQ GG RGQ R +++P Sbjct: 364 EAFIGRPIPQFTEPGFEADLSVPPQPLLPPRHQQGRQDGEGGEPRGQ---RNKKKPHNKP 420 Query: 415 GGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 A P + P G P E Q R+ RKPA Q Sbjct: 421 ARRADAPTLPMDAPEHDSGAPAPVAEAQPPRQ-RKPAPGQ 459 >UniRef50_Q0HYG8 DEAD/DEAH box helicase domain protein n=78 Tax=Bacteria RepID=Q0HYG8_SHESR Length = 549 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 265/439 (60%), Positives = 332/439 (75%), Gaps = 17/439 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF SLGLS I +AV EQGY P+PIQ QAIPAVL G+D+MA+AQTGTGKTAGFTLPLL Sbjct: 1 MSFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L+++ AK + +RAL+LTPTRELAAQ+ E+V Y KYL +RS VVFGGV INPQ+ Sbjct: 61 E-LLSKGNKAKAGQ-IRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQ 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KLR GVDVLVATPGRLLDL QN VK +Q+EILVLDEADRMLDMGFI DI+++L LPAK Sbjct: 119 KLRHGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAK 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNL+FSATFSD+I+ LA+ L++ P+EI V RN A++ V Q + VDK +K LL +I Sbjct: 179 RQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSALLIQLI 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +WQQVLVF+RTKHGAN LA+ L + I +AAIHGNKSQGART+ALADFKSG++RVLV Sbjct: 239 KQEDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLV 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARGLDI++LP VVN++LPNVPEDYVHRIGRTGRA A+G+A+SLV +E KLLRDI Sbjct: 299 ATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSSEEFKLLRDI 358 Query: 361 EKLLKKEIPRIAIPGYEPDPSI------------KAEPIQNGRQQRGGGG---RGQGGGR 405 E+L+ + + R I G+ P ++ K + + + R+ R G R G Sbjct: 359 ERLINRVLERQEIEGFGPAHALPESTLIAHGKDNKVKAVASQRKHRSAGKPTPRTGTGRD 418 Query: 406 GQQQPRRGEGGAKSASAKP 424 G++ P +G A+ ++ P Sbjct: 419 GRKTPDSIDGSAQQKNSNP 437 >UniRef50_Q126W4 DEAD/DEAH box helicase-like n=153 Tax=Bacteria RepID=Q126W4_POLSJ Length = 579 Score = 504 bits (1299), Expect = e-141, Method: Compositional matrix adjust. Identities = 248/399 (62%), Positives = 309/399 (77%), Gaps = 2/399 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F+ L L+P IL+AV EQGY PTPIQ QAIPAVL G DL+ AQTGTGKTA FTLP+L Sbjct: 1 MTFEELKLAPAILKAVLEQGYDTPTPIQAQAIPAVLAGSDLLGGAQTGTGKTAAFTLPML 60 Query: 61 QHLIT--RQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 Q L T R + +G VRALI+TPTRELAAQ+ E+VR Y KYL++ S+V+FGGV + Q Sbjct: 61 QRLSTEPRLTNRRGVNAVRALIMTPTRELAAQVEESVRTYGKYLDLTSMVMFGGVGMGAQ 120 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 + KLR GVD+LVATPGRLLD Q + L QV+ILVLDEADRMLDMGFIHDI++VL +P Sbjct: 121 IDKLRRGVDILVATPGRLLDHAGQGTLDLSQVQILVLDEADRMLDMGFIHDIKKVLALVP 180 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 +Q+LLFSATFSD+I+ LA LL +PL I+V RNT ++TQ +H V + +K+ LL+H Sbjct: 181 KHKQSLLFSATFSDEIRELANGLLRDPLHIQVTPRNTTVQRITQTIHPVGRSKKKALLTH 240 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 +I + NW QVLVFTRTK GAN++AE L K+GI + A+HGNKSQ ART+AL FK G IR Sbjct: 241 IINEHNWSQVLVFTRTKFGANNVAEHLTKNGIEAMALHGNKSQTARTQALQGFKDGTIRA 300 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATDIAARG+DI+ELPHVVNYE+PNV EDYVHRIGRTGRA +GEA+SLVC+DE ++ Sbjct: 301 LVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGNSGEAVSLVCLDEEGFMQ 360 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGG 397 DIE+ K+ I ++ +PG+E +P +AEP+ GRQ GG Sbjct: 361 DIERFTKQNIEKVLVPGFEAEPGERAEPLAMGRQTIWGG 399 >UniRef50_C5CU85 DEAD/DEAH box helicase domain protein n=10 Tax=Comamonadaceae RepID=C5CU85_VARPS Length = 601 Score = 499 bits (1286), Expect = e-140, Method: Compositional matrix adjust. Identities = 246/402 (61%), Positives = 308/402 (76%), Gaps = 3/402 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+FD L L+P IL+AV E GY PTPIQ QAIPAVLEG DL+ AQTGTGKTA FTLP+L Sbjct: 1 MNFDELKLAPAILKAVHEHGYDTPTPIQAQAIPAVLEGHDLLGGAQTGTGKTAAFTLPML 60 Query: 61 QHLIT--RQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 L T + G +RAL+LTPTRELAAQ+ E+VR Y KYL + S V+FGGV +NPQ Sbjct: 61 HKLSTGASATNKFGGIGIRALVLTPTRELAAQVEESVRTYGKYLELDSTVIFGGVGMNPQ 120 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 + KL+ GVD+LVATPGRLLDL+ Q + L QV++L+LDEADRMLDMGFIHD++++L +P Sbjct: 121 ISKLKKGVDILVATPGRLLDLQQQGMLDLSQVQMLILDEADRMLDMGFIHDVKKILALVP 180 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 ++Q+LLFSATFSD+I+ LA LL NP I+V RNT ++TQ +H V + +K+ LL+H Sbjct: 181 KEKQSLLFSATFSDEIRDLAATLLKNPQSIQVTPRNTTVQRITQVIHPVGRGKKKALLAH 240 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 +I + W QVLVFTRTK GAN +AE L K+GI + A+HGNKSQ ART+ALA FKSGDIR Sbjct: 241 IINENKWSQVLVFTRTKFGANSVAEFLTKNGIEAMALHGNKSQSARTQALAGFKSGDIRA 300 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATDIAARG+DI+ELPHVVNYE+PNV EDYVHRIGRTGRA ++GEA+S VC+DE ++ Sbjct: 301 LVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGSSGEAVSFVCMDEEGFMQ 360 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQ-RGGGGR 399 +IE+ K+ IP + G+ P+ +AEPI GRQ GG GR Sbjct: 361 EIERFTKQTIPVQFVEGFGPEEGERAEPIAMGRQTIWGGAGR 402 >UniRef50_B7VQT9 ATP-dependent RNA helicase n=15 Tax=Bacteria RepID=B7VQT9_VIBSL Length = 523 Score = 479 bits (1234), Expect = e-134, Method: Compositional matrix adjust. Identities = 236/378 (62%), Positives = 300/378 (79%), Gaps = 2/378 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF SLGLS IL+A+ QGY +P+PIQ++A+PAVL G+D+MA+AQTGTGKTAGFTLP+L Sbjct: 1 MSFTSLGLSEPILKAIEAQGYDKPSPIQEKAVPAVLTGKDVMAAAQTGTGKTAGFTLPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + ++++ P + + VRAL+LTPTRELAAQ+ +V Y L + S VVFGGV INPQM Sbjct: 61 E-MLSKGPRVRQNQ-VRALVLTPTRELAAQVNGSVVKYGINLPLTSTVVFGGVKINPQMQ 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KLR G DVLVATPGRLLDL +QNAV+ DQ+EILVLDEADRMLDMGFI DIR++L LP K Sbjct: 119 KLRKGSDVLVATPGRLLDLYNQNAVRFDQLEILVLDEADRMLDMGFIRDIRKILAFLPKK 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSATFSDDI++LA+ L++NP+EI V+ N+ + V Q ++ VDKK+K +L+ +I Sbjct: 179 RQNLLFSATFSDDIRSLAKGLVNNPVEISVSPANSTAPTVEQSIYPVDKKKKAPMLAKLI 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 +W+QVLVF++TKHGAN LA L + I SA IHGNKSQGART+AL +FK+G +RVLV Sbjct: 239 KDNDWRQVLVFSKTKHGANKLARFLEEQDITSAPIHGNKSQGARTKALENFKTGKVRVLV 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+DI +LP VVN++LPNV EDYVHRIGRTGRA G+A+SLVC DE L I Sbjct: 299 ATDIAARGIDIPQLPQVVNFDLPNVSEDYVHRIGRTGRAGEVGKAISLVCADEVGELFGI 358 Query: 361 EKLLKKEIPRIAIPGYEP 378 E+L+++ + R + G+ P Sbjct: 359 ERLIQQVLERRELEGFAP 376 >UniRef50_Q0AFH3 DEAD/DEAH box helicase domain protein n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AFH3_NITEC Length = 488 Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust. Identities = 223/396 (56%), Positives = 296/396 (74%), Gaps = 8/396 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+ L LS +ILRAV ++GY PTPIQ Q IP +L G+D+MASAQTGTGKTAGFTLPLL Sbjct: 5 VTFEQLDLSSEILRAVIDEGYINPTPIQAQVIPPILAGKDVMASAQTGTGKTAGFTLPLL 64 Query: 61 QHLITRQPHAK-----GRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSI 115 HL Q HA R PVRALI+ PTRELA QI E+VR Y KYL +R+ VVFGGV+I Sbjct: 65 HHL---QAHASSSTSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTTVVFGGVNI 121 Query: 116 NPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLT 175 PQ+ +LR GV++LVATPGRLLDL AV + EILVLDEADRMLDMGF+ DI++V+ Sbjct: 122 EPQITELRNGVEILVATPGRLLDLVEHKAVNFSKTEILVLDEADRMLDMGFLPDIKKVMA 181 Query: 176 KLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKREL 235 LP++RQ+L+FSATFSD+I+ LA+ LL +P+ IEVA +NT ++ ++ VH + + K L Sbjct: 182 LLPSQRQSLMFSATFSDEIRKLADGLLKHPVRIEVAAQNTINESISHVVHRIKPESKFAL 241 Query: 236 LSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295 L H++ + + +Q LVF +TKHGA+ LA+ L+ I + AIHG+K+Q RT+AL++FK GD Sbjct: 242 LLHLVKQQDLKQALVFVKTKHGASQLAQMLSHHKILALAIHGDKNQQQRTQALSEFKHGD 301 Query: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK 355 +++LVATD+AARG+DIE+L HVVNYELP PEDYVHRIGRTGRA + G+A+SLV E + Sbjct: 302 VQILVATDVAARGIDIEKLSHVVNYELPGNPEDYVHRIGRTGRAGSKGKAISLVSEHETE 361 Query: 356 LLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGR 391 LL IEKLL ++ I G++ + +++ P + R Sbjct: 362 LLTSIEKLLNTKLEIEQIAGFDAELFVRSLPDRKNR 397 >UniRef50_Q82T78 RhlE; ATP-dependent RNA helicase RhlE n=1 Tax=Nitrosomonas europaea RepID=Q82T78_NITEU Length = 498 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 232/452 (51%), Positives = 311/452 (68%), Gaps = 16/452 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F LGLS +IL AV ++GY PTPIQ Q IP++L G+D+MASAQTGTGKTAGFTLPLL Sbjct: 5 VTFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLL 64 Query: 61 QHLITRQPHAK-----GRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSI 115 L Q +A R PVRALI+ PTRELA QI E+VR Y KYL +R+ VVFGG++I Sbjct: 65 YRL---QAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINI 121 Query: 116 NPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLT 175 PQ+ L+ GV++LVATPGRLLDL Q AV + EILVLDEADRMLDMGF+ DI+RV+ Sbjct: 122 EPQIAALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMA 181 Query: 176 KLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKREL 235 L +RQ+L+FSATFS +I+ LA+ LL P+ IE A +NT ++ ++ +H+V K L Sbjct: 182 LLSPQRQSLMFSATFSGEIRKLADSLLKQPVRIEAAVQNTVNESISHVIHWVKPDSKFAL 241 Query: 236 LSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295 L H+I + N +Q L+F +TKHGA+HLA+ L++ I + AIHG+++Q RT+ALA+FK GD Sbjct: 242 LLHLIRQQNLKQALIFVKTKHGASHLAQMLSRHEISAVAIHGDRNQQQRTQALAEFKHGD 301 Query: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK 355 +++LVATD+AARG+DIE+L HV+NYELP PEDYVHRIGRTGRA + G+A+SLV E + Sbjct: 302 VQILVATDVAARGIDIEKLSHVINYELPGNPEDYVHRIGRTGRAGSKGKAISLVSEHEKE 361 Query: 356 LLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG 415 LL +IEKLL ++ I G++ + ++ P R+ R G + G + + G Sbjct: 362 LLANIEKLLNAKLETEQIAGFDAEQFARSLP---DRKNRMSAGNSRYGNKPMEN-----G 413 Query: 416 GAKSASAKPAEKPSRRLGDAKPAGEQQRRRRP 447 KS S K + PS + G Q+ P Sbjct: 414 SEKSRSEKHRKLPSSQKYSGSRRGGTQKYSDP 445 >UniRef50_Q3AZR1 DEAD/DEAH box helicase-like n=2 Tax=Synechococcus RepID=Q3AZR1_SYNS9 Length = 458 Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust. Identities = 231/451 (51%), Positives = 309/451 (68%), Gaps = 29/451 (6%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+ L L + +R++ E GY PTPIQ IP VL+G+D+MASAQTGTGKTA F LP++ Sbjct: 24 LTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPII 83 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L R R V +L+LTPTRELAAQ+ + + Y+KYL +RS VFGGVSI PQ+ Sbjct: 84 ELL--RAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYLALRSDAVFGGVSIRPQVK 141 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L+GGVD+LVATPGRLLDL +Q ++ D +++LVLDEADRMLDMGFI DI++V+ LP Sbjct: 142 RLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIKKVIEYLPKN 201 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQN++FSATFS IK LA LL++P+EI+ + +N A+ + VH D RK +LL H+I Sbjct: 202 RQNMMFSATFSTPIKKLALGLLNDPVEIKASVQNQAAPTIEHLVHPCDMARKVDLLCHLI 261 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 W+QVLVF RTKHGA+ + + L +R++AIHGNKSQGARTRAL FK+GDI++LV Sbjct: 262 KTNKWKQVLVFARTKHGADKVVKILCHQHMRASAIHGNKSQGARTRALEGFKNGDIKILV 321 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+DI +LP+V+N +LPNV EDYVHRIGRTGRA G A+SLV +E LL+ I Sbjct: 322 ATDIAARGIDIHQLPYVINLDLPNVAEDYVHRIGRTGRAGEAGHAISLVAAEEALLLKAI 381 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 EK + +P++ + G+E +KAEP++ GG+ Q++P S Sbjct: 382 EKFIGNPLPKVDVVGFE-QKILKAEPLKQ-------------GGQRQRRP--------SQ 419 Query: 421 SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPA 451 SA+P +K A QQRR RK + Sbjct: 420 SARPGQK-----AKTNHASSQQRRSDWRKSS 445 >UniRef50_C7PD17 DEAD/DEAH box helicase domain protein n=139 Tax=root RepID=C7PD17_CHIPD Length = 492 Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust. Identities = 238/465 (51%), Positives = 311/465 (66%), Gaps = 21/465 (4%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF+ LGL +L+A+ +GY PTPIQQQAIP VL+ RDL+ AQTGTGKTA F +PLL Sbjct: 27 LSFEQLGLIEPLLKALDNEGYTAPTPIQQQAIPHVLDTRDLLGCAQTGTGKTAAFAIPLL 86 Query: 61 Q--HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 Q H + KG R ++ALILTPTRELA QI E+ Y K+L+++SLV+FGGVS +PQ Sbjct: 87 QLMHQDQQAQQRKGLRNIKALILTPTRELAIQIQESFTAYGKFLDLKSLVIFGGVSQHPQ 146 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ GVD+L+ATPGRLLDL QN + L ++ VLDEADRMLDMGF+HD++RV+ KLP Sbjct: 147 TEALKKGVDILIATPGRLLDLISQNYITLRDIKYFVLDEADRMLDMGFVHDVQRVIVKLP 206 Query: 179 AKRQNLLFSATFSDDIKALAEKLL-HNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 +RQ+L FSAT +I+ LA+ +L +NP ++EV ++ ++ +TQ ++FV+K KR LL Sbjct: 207 EQRQSLFFSATMPPEIQTLAKAILRNNPAKVEVTPVSSTAETITQSMYFVNKNDKRNLLL 266 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 H++ + +LVFTRTKHGA+ + + L+K I + AIHGNKSQ AR RAL +FKS R Sbjct: 267 HILKDKAIKTLLVFTRTKHGADRVVKDLHKAEITAEAIHGNKSQNARQRALNNFKSQQTR 326 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 VLVATDIAARG+DI+EL HVVNYELPNVPE YVHRIGRTGRA A G A+S +E L Sbjct: 327 VLVATDIAARGIDIDELTHVVNYELPNVPETYVHRIGRTGRAGADGIAISFCEPEEKAFL 386 Query: 358 RDIEKLLKKEIP-----------RIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRG 406 +DI KL+ +EIP +A+P +P P K + Q+ R ++GG R + G Sbjct: 387 KDILKLISREIPVETEHPFHNGDSMALPAPKPAPQQKPKQ-QHPRDKKGGFSRNRQGVVQ 445 Query: 407 QQQPRRGEGGAKSASAKPAEKPSRRLGDAKPA---GEQQRRRRPR 448 + R G G K S KP R KP G RR RP+ Sbjct: 446 SRDARPGAGAGKPNSGKPN---GGRPQGGKPKDGNGNSARRERPQ 487 >UniRef50_C4ZJL9 DEAD/DEAH box helicase domain protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZJL9_THASP Length = 545 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 222/385 (57%), Positives = 279/385 (72%), Gaps = 4/385 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF LGL P++L+AV + GY EPTPIQ+QAIP V+ G+D+M AQTGTGKTAGFTLPLL Sbjct: 1 MSFADLGLIPELLQAVTDAGYTEPTPIQRQAIPIVIAGKDVMGGAQTGTGKTAGFTLPLL 60 Query: 61 QHLITRQPH---AKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINP 117 H I R + + R RALIL PTRELA Q+ E+V+ YSK+L +RS+ V+GGV I P Sbjct: 61 -HRIARHANTSTSPARHQTRALILAPTRELAMQVFESVKTYSKHLPLRSVCVYGGVDIRP 119 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 Q +LR G+++++ATPGRLLD Q ++ L QVE+LVLDEADRMLDMGFI DI+R+L L Sbjct: 120 QQAELRRGIEIVIATPGRLLDHLEQKSINLSQVEVLVLDEADRMLDMGFIPDIKRILALL 179 Query: 178 PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 P +RQ+LLFSATFSD+IK LA+++L P IEVARRN S+ +T VH V KR LL+ Sbjct: 180 PKQRQSLLFSATFSDEIKRLADQMLKEPQLIEVARRNMVSETITHVVHPVSSGMKRNLLA 239 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 H++ Q LVF TK LA L + GI + AIHG+K Q RT L FKSG +R Sbjct: 240 HLLRHKPDTQALVFVDTKLMCGRLAHYLERSGISADAIHGDKGQQQRTDTLEAFKSGKLR 299 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 VLVATD+AARGLDI+ELP V+N+ELP+ EDYVHRIGRTGRA G A+SLV +E L Sbjct: 300 VLVATDVAARGLDIDELPFVINFELPHTAEDYVHRIGRTGRAGHHGYAISLVSSEEKHWL 359 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSI 382 +IEKL+K +IP+ +PG++PDP Sbjct: 360 SEIEKLIKLQIPQERVPGFDPDPDF 384 >UniRef50_Q12QV2 DEAD/DEAH box helicase-like protein n=27 Tax=Gammaproteobacteria RepID=Q12QV2_SHEDO Length = 433 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 222/429 (51%), Positives = 291/429 (67%), Gaps = 7/429 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+S +P+ILRA+AE GY+ TP+QQQAIPA+ G D++ASAQTGTGKTA F LP+L Sbjct: 1 MKFESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q + R P RALILTPTRELAAQ+ +N+ YSK++NI L ++GG+ + Q Sbjct: 61 QKMHER-PMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQ 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL+ G D++VATPGRLL+ + L VE LVLDEADRMLDMGF DI+++L + K Sbjct: 120 KLKQGADIIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLDMGFSTDIQKILQAVNKK 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSATFS +K LA +L P I ++NT + V+Q V+ V+++RKRELLS +I Sbjct: 180 RQNLLFSATFSTAVKKLANDMLDKPKIISADKQNTTAATVSQVVYPVEQRRKRELLSELI 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 G NWQQVLVFT T+ A+ L +LN DGI SA +HG K+QG+R RAL +F G +RVLV Sbjct: 240 GTKNWQQVLVFTATRADADKLVTELNLDGIPSAVVHGEKAQGSRRRALREFIEGKVRVLV 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 AT++AARGLDI+ L +VVNY+LP + EDYVHRIGRTGRA TG A+S V +E + L DI Sbjct: 300 ATEVAARGLDIQGLEYVVNYDLPFLAEDYVHRIGRTGRAGKTGVAISFVSREEERTLADI 359 Query: 361 EKLLKKEIPRIAIPGYEPDP------SIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE 414 EKL+ ++I RI +PGYE +I+ +Q+R Q G Q RR + Sbjct: 360 EKLIGQKIRRITVPGYEVSSRELLLKTIEKRRSFGKKQERNDNVGAQVVGEKNMQGRRVK 419 Query: 415 GGAKSASAK 423 G +++ K Sbjct: 420 VGKPTSTVK 428 >UniRef50_A0RP33 Putative ATP-dependent RNA helicase RhlE n=2 Tax=Campylobacter fetus RepID=A0RP33_CAMFF Length = 624 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 210/427 (49%), Positives = 289/427 (67%), Gaps = 5/427 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F LS IL A+ E Y PT IQQ AIPA+++G+D++A A+TGTGKTA F LP+L Sbjct: 1 MLFSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L +++ + K R R L+L PTRELA Q+ +N++ Y+K L ++L VFGGVS PQ+ Sbjct: 61 EKLSSKERNKK-RPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQ 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ G+D++VATPGRLLDL QNA+ L+ ++ LV DEADRM DMGFIHDI++++ LP K Sbjct: 120 ALKSGIDIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLPEK 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSAT+ ++ +L +L +PL I++ +N+ + + Q V VD+ +K ELL+ + Sbjct: 180 RQNLLFSATYPSEVMSLCNSMLKDPLRIQIEEQNSTALNIIQRVILVDRDKKMELLNEVF 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 G + Q LVFTRTK A+ + L+ G AA+HG+KSQ R++ L FK+G ++LV Sbjct: 240 GVESIDQALVFTRTKRSADKCSSYLHTLGFSVAALHGDKSQSVRSKTLEKFKNGKTKILV 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARGLDI+ELP V+N ELPNVPEDYVHRIGRTGRA G A+SLVCVDE K L DI Sbjct: 300 ATDIAARGLDIKELPFVINLELPNVPEDYVHRIGRTGRAGNDGVAISLVCVDEFKFLIDI 359 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGG----RGQQQPRRGEGG 416 EKL+ K++ R + G+E D +K +PI+ G+ R G + +++PR Sbjct: 360 EKLIDKKLIRESFSGFEADLRVKPQPIRRGQNMNKSSERDDRNGNKIDKKERKPREFNSD 419 Query: 417 AKSASAK 423 K S + Sbjct: 420 KKDESKR 426 >UniRef50_Q2SZW4 ATP-dependent RNA helicase RhlE n=104 Tax=Proteobacteria RepID=Q2SZW4_BURTA Length = 571 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 237/460 (51%), Positives = 304/460 (66%), Gaps = 11/460 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD GL+ +ILRA+AEQGY PTPIQ AIP VL GRD+M +AQTGTGKTA F+LP++Q Sbjct: 102 TFDQFGLAAEILRAIAEQGYTTPTPIQANAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 161 Query: 62 HLI--TRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 L+ + R PVRALILTPTRELA Q+ NV Y+K+ +RS VVFGGV +NPQM Sbjct: 162 RLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQM 221 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 +LR GV++L+ATPGRLLD Q L QV+ILVLDEADRMLDMGF+ D++R+L LP Sbjct: 222 AELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLPK 281 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ LLFSATFS +IK LA L NP IEVAR N A+ VTQ V+ V + K+ + + Sbjct: 282 ERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVVKL 341 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I + +QV+VF +K GA+ LA Q+ +DGI +AAIHG++SQ R +AL FK G+I L Sbjct: 342 IRDRSLKQVIVFCNSKIGASRLARQIERDGIVAAAIHGDRSQSERMQALDAFKRGEIEAL 401 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLDI ELP V+N++LP EDYVHRIGRTGRA A+G+ALSL +E K L D Sbjct: 402 VATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQLAD 461 Query: 360 IEKLLKK----EIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG 415 IEKL+K+ E + +P + D + ++ GR GG PRR E Sbjct: 462 IEKLIKRTLSLETLELDLPRHRHDERGGRRERERDERRGASAGRRSAGGERAHHPRR-EA 520 Query: 416 GAKSASAKP--AEKPSRRLGDAKPAGEQQRRRRPRKPAAA 453 KP + + +AKPA Q ++ P++P AA Sbjct: 521 PIDDFFLKPYVPSSSANQPEEAKPA--QPEKKAPKQPLAA 558 >UniRef50_Q485D3 ATP-dependent RNA helicase, DEAD box family n=24 Tax=Gammaproteobacteria RepID=Q485D3_COLP3 Length = 455 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 218/450 (48%), Positives = 296/450 (65%), Gaps = 17/450 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MS DS+GLS D+L+AV GY+ TPIQQ+AIP + +G DL+ASAQTGTGKTA F+LP+L Sbjct: 1 MSVDSIGLSADLLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPIL 60 Query: 61 QHLITRQPHAKGR----------------RPVRALILTPTRELAAQIGENVRDYSKYLNI 104 + AK + +RALILTPTRELA Q+ +N++ +S+YL I Sbjct: 61 DAIAKANHAAKSSTTSTDENSAEEKSASGQAIRALILTPTRELANQVADNIKQFSQYLPI 120 Query: 105 RSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDM 164 +S VV+GG + Q L+ G+DVLVATPGRLL+ V L QV+ LVLDEADRMLDM Sbjct: 121 KSGVVYGGGKMASQTKMLKQGLDVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRMLDM 180 Query: 165 GFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHV 224 GF+ DI ++L + K Q L+FSATFSD +K+LA +LL +P I V++ NT S ++ Q V Sbjct: 181 GFLTDIEKLLLAVKHKHQTLMFSATFSDRVKSLANQLLKSPKTISVSKENTTSGKIKQAV 240 Query: 225 HFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGAR 284 ++V ++RKRELLS +IG NWQQVLVF TK AN LA++L DGI++A HG+K+QGAR Sbjct: 241 YWVTEERKRELLSELIGVNNWQQVLVFAGTKESANTLAKELKLDGIKAALCHGDKTQGAR 300 Query: 285 TRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGE 344 +AL F G +RVLVATD+AARGLDI +L VVN+ LP +PEDYVHR+GRTGRA +G Sbjct: 301 NKALEQFSEGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVGRTGRAGKSGT 360 Query: 345 ALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGG 404 A+SLV + + L +IE+L++++ RI PGYE + ++A Q +R R + Sbjct: 361 AISLVSPKDERFLENIEQLIERKFERIVAPGYEFN-RLEASEYQEATVKRDSKNRYRAAQ 419 Query: 405 RGQQQPRRGEGGAKSASAKPAEKPSRRLGD 434 Q + + KS S + + + + Sbjct: 420 EKNQNLAKKDVKIKSLSKNKTARTNSKYNN 449 >UniRef50_D2QGG1 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=D2QGG1_9SPHI Length = 485 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 208/372 (55%), Positives = 269/372 (72%), Gaps = 1/372 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L L IL+A+ E+GY PTPIQ++AIP +L RDL+ AQTGTGKTA F +P+L Sbjct: 1 MQFSELSLIDPILKALTEEGYTNPTPIQEKAIPILLSRRDLLGCAQTGTGKTAAFAIPIL 60 Query: 61 QHLIT-RQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 Q L R G R ++ LILTPTRELA QI E+ Y ++LNIR+ V+FGGVS + Q+ Sbjct: 61 QLLSEERSKSTGGPRRIKTLILTPTRELAIQIAESFTAYGRHLNIRNTVIFGGVSQHSQV 120 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ GVDVL+ATPGRLLDL +Q + L V+ VLDEADRMLDMGFIHD+++V+TKLP Sbjct: 121 NTLKAGVDVLIATPGRLLDLMNQGFISLRDVQFFVLDEADRMLDMGFIHDVKKVITKLPT 180 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ+L FSAT D+ LA+ +L+NP ++EV ++ +D + Q ++FV K+ KR+LL H+ Sbjct: 181 HRQSLFFSATMPPDVAKLADTILNNPAKVEVTPVSSTADTIEQAMYFVGKEDKRKLLVHI 240 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + N + LVF RTKHGA+ + + L K GI + AIHGNKSQ AR RAL++FKS + RVL Sbjct: 241 LDDKNIKSALVFARTKHGADKVVKDLLKAGIGAEAIHGNKSQNARQRALSNFKSRETRVL 300 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARG+D++EL HV+NYELPN+PE YVHRIGRTGRA G ALS +E + LRD Sbjct: 301 VATDIAARGIDVDELSHVINYELPNIPETYVHRIGRTGRAGHDGIALSFCDAEETEYLRD 360 Query: 360 IEKLLKKEIPRI 371 I KL+ K +P I Sbjct: 361 IHKLIGKRVPVI 372 >UniRef50_Q0B215 DEAD/DEAH box helicase domain protein n=8 Tax=Proteobacteria RepID=Q0B215_BURCM Length = 511 Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust. Identities = 208/377 (55%), Positives = 268/377 (71%), Gaps = 1/377 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF SLGL +LR + + Y+ PTP+Q +AIPAVL G+D+MA AQTGTGKTAGF LPLL Sbjct: 35 MSFASLGLIDPLLRNLQDLNYQTPTPVQVKAIPAVLGGKDVMAGAQTGTGKTAGFALPLL 94 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L+ + P R R L+L PTRELA Q+ ++ Y K L++R L +GGVSINPQMM Sbjct: 95 QRLVQQGPAVSSNR-ARVLVLVPTRELAEQVLQSFVAYGKGLDLRFLAAYGGVSINPQMM 153 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KLR GVDVLVATPGRLLDL QNAV+ DQVE LVLDEADRMLD+GF ++ V LP + Sbjct: 154 KLRKGVDVLVATPGRLLDLNRQNAVQFDQVETLVLDEADRMLDLGFARELNAVFAALPVQ 213 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSATF+DDI+ +A +L +P+ I V+ N ++ Q V VDK+ K +L H++ Sbjct: 214 RQTLLFSATFTDDIRTMAASILRSPVNISVSPPNVTGSKIKQWVVTVDKRNKPDLFMHLV 273 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + NW LVF +T++G +LA L++ G IHG+K Q AR RAL FK+G++++LV Sbjct: 274 AENNWDHALVFVKTRNGVEYLAAMLDEAGYAVDTIHGDKPQPARLRALERFKTGEVQMLV 333 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI++LP V+N +LP V +DYVHRIGRTGRA A+G A+SLVC DE L I Sbjct: 334 ATDVAARGLDIDDLPLVINVDLPIVAQDYVHRIGRTGRAGASGVAVSLVCADEAPQLAAI 393 Query: 361 EKLLKKEIPRIAIPGYE 377 E L+ + + R PG+E Sbjct: 394 EALIGQTLRREEEPGFE 410 >UniRef50_A9GRX1 DeaD2 protein n=5 Tax=Bacteria RepID=A9GRX1_SORC5 Length = 478 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 217/384 (56%), Positives = 270/384 (70%), Gaps = 7/384 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L L +LRA+ +GY PTPIQQQAIP +LEG DL+ AQTGTGKTA F LP+L Sbjct: 1 MQFADLKLIEPLLRAIEAEGYSAPTPIQQQAIPPILEGNDLLGCAQTGTGKTAAFALPIL 60 Query: 61 QHLI-TRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 Q L + P G +R L+LTPTRELAAQ+ E+ Y K L +R+ VVFGGV PQM Sbjct: 61 QRLAQSGGPRQGG---LRVLVLTPTRELAAQVAESFTTYGKNLGLRTAVVFGGVGQRPQM 117 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 LR GVDVLVATPGRLLDL Q +++ LVLDEADRMLDMGFIHDIRRVL LP Sbjct: 118 EALRRGVDVLVATPGRLLDLCSQGIAPFGRLDTLVLDEADRMLDMGFIHDIRRVLAMLPE 177 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ LLFSAT DI LA +L +P+ +EVAR T ++ + Q V FV++ KR +L H+ Sbjct: 178 RRQTLLFSATMPPDILKLANSILRSPVRVEVARIATTAENIDQRVVFVERSDKRAMLEHV 237 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++ +VFTRTKHGAN + +QL++ I + AIHGNKSQGAR RALA FK G VL Sbjct: 238 LKDPALRRAIVFTRTKHGANRVVQQLSRARIEAVAIHGNKSQGARERALASFKQGTTSVL 297 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARG+DI+++ HV+NY+LPN+PE YVHRIGRT RA A+G ALS +E L D Sbjct: 298 VATDIAARGIDIDDISHVINYDLPNIPESYVHRIGRTARAGASGVALSFCDSEERAYLAD 357 Query: 360 IEKLLKKEIPRIAIPG---YEPDP 380 IE+L++K +P +A PG ++ DP Sbjct: 358 IERLIQKRLPLLADPGVPVFQIDP 381 >UniRef50_B0TQ71 DEAD/DEAH box helicase domain protein n=31 Tax=Gammaproteobacteria RepID=B0TQ71_SHEHH Length = 437 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 210/399 (52%), Positives = 276/399 (69%), Gaps = 3/399 (0%) Query: 16 VAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRP 75 VA++GY++PT IQ +AIPA+L GRD+MASAQTGTGKTA FTLPLLQ LI + + + Sbjct: 40 VAQKGYQQPTAIQAEAIPAILAGRDIMASAQTGTGKTAAFTLPLLQRLIDKSSSDEQSKA 99 Query: 76 VRA--LILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATP 133 RA L+L PTRELA Q+ NV Y+ ++ S+V++GGVSI+ Q KL GVDV+VATP Sbjct: 100 KRASVLVLAPTRELAVQVNTNVSQYAVNTDVSSIVIYGGVSIDAQATKLAAGVDVIVATP 159 Query: 134 GRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDD 193 GRLLD + + L +E LV DEADRMLDMGF+ +I +L +LPAKRQ LLFSATFS Sbjct: 160 GRLLDHVRRGTLNLSDIEYLVFDEADRMLDMGFMDEINAILKQLPAKRQTLLFSATFSSA 219 Query: 194 IKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTR 253 I L++KLL PL IEV + N+A++ + Q V+ VD +RK ELL H+I K WQQVLVF+R Sbjct: 220 IFELSKKLLQKPLRIEVDKANSAANSIEQVVYAVDSERKTELLCHLINKSAWQQVLVFSR 279 Query: 254 TKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEE 313 K A+ +A+++ GI + A HG+ QGAR + L DFK G I+ LVATD+AARGLDI E Sbjct: 280 KKQTADLIAQKMLAAGIEAKAFHGDLGQGAREQVLNDFKQGKIKALVATDVAARGLDIVE 339 Query: 314 LPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAI 373 L VVNYE+P V EDYVHRIGRTGRA TG+A++L D+ LL ++E ++ K +P+ + Sbjct: 340 LKVVVNYEIPFVAEDYVHRIGRTGRAGNTGKAITLYSEDDALLLEEVESVIDKRLPQQWL 399 Query: 374 PGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRR 412 G+EPD + K EP+ + R + G + RR Sbjct: 400 EGFEPDLT-KLEPVTRKNSKAAQRQRAKKRALGADKRRR 437 >UniRef50_Q15T34 DEAD/DEAH box helicase-like n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15T34_PSEA6 Length = 458 Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust. Identities = 206/378 (54%), Positives = 267/378 (70%), Gaps = 2/378 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF++LGL +++ A+A QGY T IQ++AIP VL DL+A AQTGTGKTA FTLPLL Sbjct: 1 MSFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L +Q + + VR+LI+TPTRELAAQ+ +V YS LNIRS V+GGV I PQ+ Sbjct: 61 QRLAAKQ--STKVQGVRSLIVTPTRELAAQVAISVEIYSTQLNIRSFAVYGGVRIEPQIA 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L+ GVDVL+ATPGRLLDL Q A+ + +EILV DEADRMLD+GFI D++R+ + LP K Sbjct: 119 QLQEGVDVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFIDDVKRIQSLLPVK 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSATFS IK A ++L+ P IEV+ N+ D V Q H +++ RK L +I Sbjct: 179 RQTLLFSATFSKQIKHFAREMLNAPKTIEVSAVNSTVDLVAQTFHPIEQARKSAALIQLI 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + W Q LVF RTK A+ L +L GI +A+IH N++Q ART+AL FK+G+I+VLV Sbjct: 239 QQHRWSQTLVFIRTKRTADALVTELEDAGIAAASIHANRTQHARTQALNAFKAGEIQVLV 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ +LP VVNY+LP VPEDYVHRIGRTGRA TG A+SL DE L+ + Sbjct: 299 ATDIAARGIDVSQLPCVVNYDLPYVPEDYVHRIGRTGRAGNTGTAISLFSPDEISQLQSL 358 Query: 361 EKLLKKEIPRIAIPGYEP 378 E+ L + + + G+ P Sbjct: 359 ERYLDQHLKPSTLVGFAP 376 >UniRef50_B0SEU1 Superfamily II DNA and RNA helicase n=5 Tax=cellular organisms RepID=B0SEU1_LEPBA Length = 471 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 193/368 (52%), Positives = 262/368 (71%), Gaps = 1/368 (0%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L L I +AVAE GY +PTPIQ QAIP +L+ DL+ AQTGTGKTA F LP++ Sbjct: 7 TFSDLKLDRYIQKAVAETGYTKPTPIQIQAIPLLLDNHDLLGCAQTGTGKTAAFALPMIH 66 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 +LI+ + ++P R+L+L PTRELA Q+ E+ Y KY IR+ V+FGGV NPQ Sbjct: 67 NLISTRAKPNPKQP-RSLVLVPTRELAIQVHESFVLYGKYTQIRTAVIFGGVGQNPQAKA 125 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 + G+DVL+ATPGRL+DL +QN V L +EI VLDEADRMLDMGFIHDIR++++ LP +R Sbjct: 126 IASGLDVLIATPGRLVDLMNQNLVSLKNLEIFVLDEADRMLDMGFIHDIRKIISYLPKRR 185 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 QNL FSAT +I+ LA +L P+ I+V ++ + ++Q V + + K+ LL H+ Sbjct: 186 QNLFFSATMPPEIEKLANSILVEPIRIDVTPVSSTVELISQSVMYTELADKKNLLLHLFK 245 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 N+++ ++FT+TKHGAN ++E LNK GI++ IHGNKSQ AR RAL DF+SG R LVA Sbjct: 246 DKNFKKTIIFTKTKHGANKISELLNKSGIKTDVIHGNKSQSARQRALEDFRSGKNRALVA 305 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARG+DI+++ HV+NYE+P VPE YVHRIGRT RA G A+++ DE L++DIE Sbjct: 306 TDLAARGIDIDDITHVINYEIPYVPETYVHRIGRTARAGKNGIAIAIAEADERSLIKDIE 365 Query: 362 KLLKKEIP 369 K++ IP Sbjct: 366 KVIGISIP 373 >UniRef50_A0KXT6 DEAD/DEAH box helicase domain protein n=61 Tax=Gammaproteobacteria RepID=A0KXT6_SHESA Length = 491 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 198/378 (52%), Positives = 265/378 (70%), Gaps = 2/378 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F LGL +++AV E GY PTPIQ +AIP++L G++++A+AQTGTGKTA F LPLL Sbjct: 1 MPFSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H P + +R VRA+ILTPTRELA Q+ EN+ Y+KYL + ++ ++GGV PQ Sbjct: 61 -HRFADAPKIRPKR-VRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKK 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L GVD+LVATPGRLLD+ Q A++ D+V +LVLDEADRMLDMGFI DI ++ KLP + Sbjct: 119 RLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPEQ 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSAT S +KALA+ + + +EIE++R++ AS + Q + VDK +K LLSH+I Sbjct: 179 RQNLLFSATLSKQVKALAKSAIPDAIEIEISRKSAASTHIDQWLTTVDKDKKSALLSHLI 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + NW Q L+F +TKHGA L QL K GI + A H +SQ R + L DFK+G + LV Sbjct: 239 QEQNWSQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAVREQLLIDFKAGKVSFLV 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 AT +A+RG+DI+ L V+NY+LP+ +DY+HRIGRTGRA GEA+S V D+ + L I Sbjct: 299 ATGVASRGIDIDALARVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLCAI 358 Query: 361 EKLLKKEIPRIAIPGYEP 378 E+ L I R I G+EP Sbjct: 359 ERRLGHVIVRREIAGFEP 376 >UniRef50_A7K2L3 ATP-dependent RNA helicase n=17 Tax=Vibrionaceae RepID=A7K2L3_VIBSE Length = 419 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 200/389 (51%), Positives = 276/389 (70%), Gaps = 4/389 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F LG+ ++ ++ PTP+Q+++IP VLEG++L+A+AQTGTGKTA F LP++ Sbjct: 3 VNFADLGIEQKLIETLSNLNIVTPTPVQEKSIPHVLEGKNLLAAAQTGTGKTAAFGLPII 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q T Q P +AL+L PTRELA Q+ +N+ YS +R + V+GG SI Q Sbjct: 63 Q---TVQQKKLNGTP-QALVLVPTRELAQQVFDNLNQYSAQTELRIVCVYGGTSIGVQKR 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL G D+L+ATPGRLLD V + + +LVLDEADRMLDMGF D++R+ +LPA+ Sbjct: 119 KLEEGADILIATPGRLLDHLFNGNVNISKTSMLVLDEADRMLDMGFWPDLQRIFRRLPAE 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 +Q LLFSATF IK +A KL+ +P+E+EV+ NT ++ V Q V+ VDKKRKRELL+++I Sbjct: 179 KQILLFSATFEKRIKTIAYKLMESPVEVEVSPANTTAETVKQMVYPVDKKRKRELLAYLI 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 G NWQQVLVFT+TK G++ LA++L DGI++ +I+G+KSQGAR RAL +FK G +R L+ Sbjct: 239 GSRNWQQVLVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKQGKVRALI 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI+EL VVN+++P EDYVHRIGRTGRA +G A+SL+ DE LL I Sbjct: 299 ATDVAARGLDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDEEYLLHAI 358 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQN 389 E LL + +P+ + G+EP + EP +N Sbjct: 359 ENLLDQRLPQEWLAGFEPTLIEEVEPEKN 387 >UniRef50_A0KZD5 DEAD/DEAH box helicase domain protein n=22 Tax=Alteromonadales RepID=A0KZD5_SHESA Length = 487 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 211/414 (50%), Positives = 283/414 (68%), Gaps = 15/414 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M FD+LGLS IL A+AE GY + T +QQQ IP LEG+D+MA AQTGTGKTA F LP+L Sbjct: 22 MKFDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVL 81 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L ++QP+ K +RAL++TPTRELA Q+ N++ YS++L +++L V+GG ++NPQ Sbjct: 82 EQL-SKQPNDKPL--LRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRK 138 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 + GVD+LVATPGRL D+ Q + L V LV+DEADRMLD+GF+ DI +V + + Sbjct: 139 GVEQGVDILVATPGRLFDIIGQFHLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIATE 198 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q +LFSAT+SD +K L+ K+L+ P + VA TAS V Q V+ VDK+RK ELLS ++ Sbjct: 199 HQTMLFSATYSDAVKQLSHKMLNQPEWVNVAENTTAS-TVEQLVYRVDKRRKAELLSELV 257 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 G+ NW+QVLVF TK A HL ++L DGI + HG+K+QGAR R L DFK+G +RVLV Sbjct: 258 GRNNWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLV 317 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI+ LP V+N ELP + EDYVHRIGRTGRA +G A+S V + ++L +I Sbjct: 318 ATDVAARGLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSPADDEMLAEI 377 Query: 361 EKLLKKEIPRIAIPGYE---PDPS-IKAEPI-------QNGRQQRGGGGRGQGG 403 E L+ + +P PGYE P P+ + P N + R G +G GG Sbjct: 378 EALIGQTLPVTVQPGYEEGTPLPARYREAPTDTTKTAKWNYKSSRNTGAKGAGG 431 >UniRef50_B8ILJ8 DEAD/DEAH box helicase domain protein n=10 Tax=Alphaproteobacteria RepID=B8ILJ8_METNO Length = 506 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 213/408 (52%), Positives = 275/408 (67%), Gaps = 6/408 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F GL+ I++A+AE GY PTPIQ QA+P + GRDL AQTGTGKTA F LP+L Sbjct: 4 FVDFGLAAPIMKALAETGYVTPTPIQAQAVPPAMTGRDLCGIAQTGTGKTAAFALPILHR 63 Query: 63 LITRQPHAKG-RRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L + P + RR R L+L+PTRELA+QI ++ RDY K+L + VVFGGV+I Q Sbjct: 64 LASETPAKRAPRRGCRVLVLSPTRELASQIADSFRDYGKFLPFSTTVVFGGVTIGRQERA 123 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L G+DVLVATPGRLLDL + ++ LD VE LVLDEAD+MLD+GFIH ++R++T LP R Sbjct: 124 LANGIDVLVATPGRLLDLVDRRSLSLDSVEYLVLDEADQMLDLGFIHALKRIVTLLPKAR 183 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q+L FSAT +I LA + L +P+++ V T +++V Q V V K+ LL ++ Sbjct: 184 QSLFFSATMPKNIATLAAQYLRDPVQVAVTPVATTAERVEQRVIHVSTGAKQALLGTILR 243 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +VLVFTRTKHGA+ + L K GI SAAIHGNKSQ R RALA F++G RVLVA Sbjct: 244 DESIDRVLVFTRTKHGADRVVRGLEKVGIGSAAIHGNKSQPQRERALAAFRAGTCRVLVA 303 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TDIAARG+D+E + HVVN++LPNVPE YVHRIGRT RA A G A+S +E LRDIE Sbjct: 304 TDIAARGIDVEGVTHVVNFDLPNVPEAYVHRIGRTARAGADGLAISFCNEEERAYLRDIE 363 Query: 362 KLLKKEIPRIAIP-GYEPDPS---IKAEPIQNGRQQRGGGGRGQGGGR 405 +L ++++P +AIP G+ P PS + R +R G RGQ GR Sbjct: 364 RLTRQKVPEMAIPVGFVP-PSRQEAAEAVAEAERDRRQPGPRGQRPGR 410 >UniRef50_C4G990 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G990_9FIRM Length = 538 Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust. Identities = 201/422 (47%), Positives = 282/422 (66%), Gaps = 13/422 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F GL D+L A+ + GY EPTP+Q+++IP +LEGRD++ AQTGTGKTA F LP+L Sbjct: 62 LKFSEFGLKKDLLSAIRKAGYEEPTPVQEESIPVILEGRDMIGCAQTGTGKTAAFALPVL 121 Query: 61 QHL-ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 L + ++P VRAL+LTPTRELA QI +N + Y +YL++R++ ++GG PQ+ Sbjct: 122 HKLTLLKRPR------VRALVLTPTRELAIQIFDNFKKYGRYLHLRTVCLYGGAKRGPQI 175 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 LR G D+LVATPGRLLD Q+ V L VEILVLDEADRMLDMGF+ D+ R++ P+ Sbjct: 176 GALRRGADILVATPGRLLDFMGQDLVDLSSVEILVLDEADRMLDMGFLPDVSRIVESTPS 235 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 KRQ L+FSAT +++ LA+++L +P++++V N A+D V Q + F ++ KRE+++ + Sbjct: 236 KRQTLMFSATMEKEVRQLADRMLKDPVQVQVTPENEAADTVEQKLIFSSREDKREIIASL 295 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + +VFTRTKHGA+ L+ +L + GI S AIHG+K+QG R AL FKSG +RV+ Sbjct: 296 LTDEAVESAIVFTRTKHGADKLSRELKRRGIESVAIHGDKTQGQRQDALNRFKSGKVRVM 355 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLDI +L HV NY++P Y+HRIGRTGRA +G A++L C E LR+ Sbjct: 356 VATDVAARGLDIPKLSHVFNYDVPEEAGAYIHRIGRTGRAGESGIAITLCCEAELDALRE 415 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKS 419 +E+LL+K IP + P KA + GR + G G GG Q G+ G K+ Sbjct: 416 VEELLEKPIPELQTQWSLP-LERKARKGKGGRTRHGRSGYRSGG-----QKNAGKSGHKT 469 Query: 420 AS 421 S Sbjct: 470 GS 471 >UniRef50_Q2BP56 Putative ATP-dependent RNA helicase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BP56_9GAMM Length = 427 Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust. Identities = 199/376 (52%), Positives = 265/376 (70%), Gaps = 2/376 (0%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF L L P++ + GY +PTPIQ QAIP VL G DL+A AQTGTGKTA F LP+++ Sbjct: 5 SFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIE 64 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L ++ P G RPVRAL+L PTRELA Q+ +N +Y + L +R + V+GGV + Q+ + Sbjct: 65 KL-SKNP-IDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKR 122 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G D+LVATPGRLLDL Q A+ L+++E LVLDEADRMLD+GFI I++++ R Sbjct: 123 LKRGTDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDYAADDR 182 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLF+AT + ++ LAE L+NP +I+V RN+ + Q+ Q + VD +K ++LS++I Sbjct: 183 QTLLFTATADESVEVLAEFYLNNPTKIKVTPRNSTAKQIRQFAYQVDYGQKADILSYLIT 242 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 +G W Q LVF RTK + L + L K+GI +AAIHG KSQ R R L +F +GD+ VLVA Sbjct: 243 EGKWGQTLVFVRTKKRVDELTQYLCKEGINAAAIHGEKSQRERVRMLNEFIAGDLHVLVA 302 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLDIE LP+VVNY+LPN PE YVHRIGRTGRA TGEA+SLV E + L+ IE Sbjct: 303 TDVAARGLDIESLPYVVNYDLPNQPEAYVHRIGRTGRAGETGEAVSLVAPAEREFLQRIE 362 Query: 362 KLLKKEIPRIAIPGYE 377 KL+K++I +P E Sbjct: 363 KLIKQKIKLRPVPRIE 378 >UniRef50_C7LND0 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LND0_DESBD Length = 545 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 204/383 (53%), Positives = 263/383 (68%), Gaps = 5/383 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSFD LGL ++L+A+ +GY PT IQ QAIP +L GRD++A AQTGTGKT F LP++ Sbjct: 1 MSFDQLGLRVELLKAIKNKGYEAPTAIQAQAIPVILAGRDILARAQTGTGKTDAFGLPIV 60 Query: 61 QHL-ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 Q L +TR G P RALILTPTRELA Q+GE+++ Y++ +++R V FGGV I PQ+ Sbjct: 61 QILGLTR---GNGHHP-RALILTPTRELALQVGESIKAYARKVSLRCTVAFGGVRIEPQI 116 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 +L G+D+LVATPGRLLDL Q + L +E LV DEADRMLD+GF +I +L LP Sbjct: 117 ARLERGIDILVATPGRLLDLASQEHLSLASIEFLVFDEADRMLDLGFSGEINAILDLLPT 176 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 R+ +LFSAT++ IKALA K+L P IE+ A++ V Q VH V+K K LL H+ Sbjct: 177 VRRTMLFSATYTPQIKALAAKMLDKPEYIEITPDTAAAEAVQQKVHHVNKDNKLPLLLHL 236 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I K ++LVF RT+ AN L ++L GI AA+HG+KSQ R R L +FK G I +L Sbjct: 237 IEKQKQDRILVFARTRTWANRLTDKLAAHGISVAALHGSKSQSLRKRTLEEFKDGKIHIL 296 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLDI LP VVNY++PN PEDYVHRIGRTGRA +G A+SLV +E LL Sbjct: 297 VATDVAARGLDISNLPLVVNYDIPNSPEDYVHRIGRTGRAGVSGIAVSLVSPEERNLLLA 356 Query: 360 IEKLLKKEIPRIAIPGYEPDPSI 382 IE LL+ +IP A+ G+ D + Sbjct: 357 IEDLLRHQIPVEAVKGFTEDSDV 379 >UniRef50_B3QTY3 DEAD/DEAH box helicase domain protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QTY3_CHLT3 Length = 431 Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust. Identities = 213/412 (51%), Positives = 279/412 (67%), Gaps = 11/412 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+S+ L+P ILRA+ E GY PT IQ AIP + G+D++A+AQTGTGKTA F LP+L Sbjct: 4 INFESISLNPSILRALKELGYETPTAIQAAAIPEAILGKDILATAQTGTGKTAAFALPIL 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + + R RALILTPTRELA QI N+R Y++YL +R+ V+ GGV +PQ+ Sbjct: 64 HRL--GENRSYDIRAPRALILTPTRELALQIDNNIRLYARYLRLRTGVIMGGVPAHPQIK 121 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR D+LVATPGRL+DL Q + LDQ++ VLDEADRMLDMGFI DIRR+ + P Sbjct: 122 MLRRNPDILVATPGRLIDLFDQGFIGLDQIQTFVLDEADRMLDMGFIDDIRRIESLQPRD 181 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT S +I+ALA ++L P+ IEVA ++ +D +TQ V FV++ KRELL ++ Sbjct: 182 HQTLLFSATLSPEIEALASRMLREPVRIEVAPVSSVADNITQKVLFVEQNNKRELLHNLF 241 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + ++ LVFTRTK ANH+AEQL + GI + AIH +KSQ AR RAL F G I VLV Sbjct: 242 KENDIKRALVFTRTKQRANHVAEQLIRLGISADAIHSSKSQRARQRALMLFDRGKINVLV 301 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D++ + HV+NYELP+ PE+YVHRIGRT RA A+G ALS DE ++L+ I Sbjct: 302 ATDIAARGIDVDGISHVINYELPDDPENYVHRIGRTARAGASGTALSFCDADEVRMLKGI 361 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRR 412 EKL K IAI P SI + + G + Q Q++PRR Sbjct: 362 EKLTKSS---IAICDNNPFHSIAVASMHKVAK---AGNKPQ---YFQKKPRR 404 >UniRef50_B8FPB9 DEAD/DEAH box helicase domain protein n=12 Tax=Bacteria RepID=B8FPB9_DESHD Length = 428 Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust. Identities = 194/369 (52%), Positives = 255/369 (69%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 + L + I +A+A QGY E TPIQ +AIP +LEG DL+ AQTGTGKTA F +P+LQ Sbjct: 6 LNELKIINPIQKALAAQGYSEATPIQAEAIPHLLEGLDLLGCAQTGTGKTAAFAIPILQS 65 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 L Q KG+R +RAL+L PTRELA QI E+ Y L +R+LV+FGGV PQ KL Sbjct: 66 LAMGQGLLKGKRQIRALVLAPTRELATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKL 125 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 G+D+LVATPGRLLDL +Q + L VE VLDE D+MLDMG +HD++R++T LP +RQ Sbjct: 126 EKGIDILVATPGRLLDLINQGFIDLSHVEHFVLDETDQMLDMGMLHDVKRIITYLPRERQ 185 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 N+LFSAT +I+ LA+ +L P++I + + D + Q V+FVDK K LL++ + Sbjct: 186 NMLFSATMPVEIEKLADTILKGPVKIAMTPEFSPLDIIEQEVYFVDKANKAALLTYWLKN 245 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 + VLVF+RTKHGA+ + ++LNK G + AIHGNKSQ R +AL FK R+LVAT Sbjct: 246 NEYDSVLVFSRTKHGADKIVKELNKKGFTAVAIHGNKSQANREQALHAFKKRKTRILVAT 305 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 DIAARGLDI+EL HV+NY LP VPE Y+HRIGRTGRA G+A++ +E LLRDI+K Sbjct: 306 DIAARGLDIQELSHVINYNLPEVPETYIHRIGRTGRAGLGGKAITFCDFEEKPLLRDIQK 365 Query: 363 LLKKEIPRI 371 + K +P + Sbjct: 366 RIGKTLPEV 374 >UniRef50_D2QWU0 DEAD/DEAH box helicase domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWU0_9PLAN Length = 598 Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust. Identities = 201/372 (54%), Positives = 261/372 (70%), Gaps = 5/372 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF+ LGL+ ++RA+ Y EPT IQ QAIP + GRDL AQTGTGKTA F LPLL Sbjct: 1 MSFEDLGLAEPLVRALNAANYTEPTAIQLQAIPPAIAGRDLQGCAQTGTGKTAAFALPLL 60 Query: 61 QHLIT--RQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 LI RQ +GR P RAL+L+PTRELA QI ++VR Y ++ SL ++GGVS PQ Sbjct: 61 DRLIKNPRQGKLRGRLP-RALVLSPTRELAGQIHDSVRRYGRHAMQNSLTIYGGVSQVPQ 119 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 + L G DVL+ATPGRL DL Q + L ++E+ VLDEADRMLDMGF+ DIRR++ KLP Sbjct: 120 VKGLNAGQDVLIATPGRLCDLMQQGYINLSEIEVFVLDEADRMLDMGFMPDIRRIIAKLP 179 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 ++Q LLFSAT +I+ LA +LLH+P+EI + +D +TQ +++V K K ELL+ Sbjct: 180 QQKQTLLFSATMPPEIQKLASQLLHDPVEINIEPERATADGITQSLYYVPTKHKPELLAS 239 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + + +VF RTKHG N A QL K G++ AIHGNKSQ AR R L FK+G I+V Sbjct: 240 VLKREEVTRAVVFVRTKHGCNKAALQLEKTGLKVDAIHGNKSQSARQRTLYAFKNGHIQV 299 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK-LL 357 LVATD+AARGLD+ + HV+NY+LP PE YVHRIGRTGRA +G A+S C DE + LL Sbjct: 300 LVATDVAARGLDVTGVSHVINYDLPMEPETYVHRIGRTGRAGKSGIAISF-CDDEQRGLL 358 Query: 358 RDIEKLLKKEIP 369 RD++++L K+IP Sbjct: 359 RDVQRILGKKIP 370 >UniRef50_A9KIB7 DEAD/DEAH box helicase domain protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIB7_CLOPH Length = 514 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 202/437 (46%), Positives = 292/437 (66%), Gaps = 14/437 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F+ + L +L+A+ E+G+ EP+PIQ++ IP VLEGRD++ AQTGTGKTA F LP+L Sbjct: 1 MNFNEMNLIKPLLQAIKEEGFIEPSPIQKKTIPLVLEGRDILGCAQTGTGKTAAFALPIL 60 Query: 61 QHLITRQPHAKGR-RPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 Q L +KG VRALI+TPTRELA QI E+ + KY +++ V++GGV + Q+ Sbjct: 61 QSL------SKGEGSGVRALIITPTRELAIQIYESFECFGKYTSLKQSVIYGGVGQSLQV 114 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ G+D+L+ATPGRL DL Q + LD +E+ VLDEAD+MLDMGF++DI++V+ LP Sbjct: 115 NSLKAGIDILIATPGRLNDLIGQGYITLDAIEMFVLDEADQMLDMGFLNDIKKVIKLLPK 174 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ LLFSAT +I++LA LL+NP I+++ + D + Q V+FVD+ K LL+ + Sbjct: 175 TRQTLLFSATMPKEIESLATNLLNNPEIIKISPVTSTVDSIEQSVYFVDRLNKISLLTSL 234 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I + +VLVFT+TKHGA+ +A++LNK +++ AIHG K Q AR AL+DFK G I+VL Sbjct: 235 IKEHKMSRVLVFTKTKHGADRVADKLNKAKVKTQAIHGGKGQNARQTALSDFKEGKIKVL 294 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARG+DI EL +VVNY++PN E Y+HRIGRTGRA G A++L +D+ LR+ Sbjct: 295 VATDIAARGIDISELSYVVNYDIPNQAEIYIHRIGRTGRAGLGGNAINLCNIDDMDYLRE 354 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKA--EPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 IEK + IP +P P ++ +P++ R + G+ + +++ EG Sbjct: 355 IEKHIGMVIPE--VPSKWPMLILEKTEKPVRGQRPENTTKNVGKESVKTEEKILLNEGAK 412 Query: 418 KSASAKPAEKPSRRLGD 434 K+ + K KP + G+ Sbjct: 413 KTKAHK---KPVYKTGE 426 >UniRef50_A9NFK0 ATP-dependent RNA helicase, superfamily II n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFK0_ACHLI Length = 448 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 201/368 (54%), Positives = 252/368 (68%), Gaps = 1/368 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L + I +A+ GY PT IQ+QAIP +L G+DL+ SAQTGTGKTA F +P+L Sbjct: 1 MKFSELNIIERIQKALTLSGYEAPTAIQEQAIPILLSGQDLLGSAQTGTGKTAAFAIPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q + + H K R V+ALILTPTRELA QI ENV+ Y+KYLNI S ++GGVS Q Sbjct: 61 QKIYETKEH-KAPRKVQALILTPTRELALQIHENVKIYAKYLNIISTTIYGGVSQKRQEE 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GVDV++ATPGRLLDL +Q + L V LVLDEAD+MLDMGFI D+ ++ K P K Sbjct: 120 ALKRGVDVVIATPGRLLDLMNQKIISLQDVRYLVLDEADQMLDMGFIKDVTSIVDKTPKK 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT I+ L++++L NP I V D +TQ V+ V+K K LL +I Sbjct: 180 RQTMLFSATMPKQIEVLSKQILVNPERIAVTPVTQTLDAITQSVYMVNKANKTLLLIDLI 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 N + VLVFT+TKHGAN L + L GI S IHG+KSQ AR RALA+FK G ++LV Sbjct: 240 YTLNMKSVLVFTKTKHGANKLVKNLMNLGIESEPIHGSKSQAARERALANFKKGKTKILV 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+DIE L +V+N+ELP VPE Y+HRIGRTGRA +G ALSLV E KLL + Sbjct: 300 ATDIAARGIDIEALDYVINFELPEVPETYIHRIGRTGRAGLSGMALSLVDPSEQKLLTQV 359 Query: 361 EKLLKKEI 368 EK + +I Sbjct: 360 EKHINSKI 367 >UniRef50_Q30SZ2 DEAD/DEAH box helicase-like protein n=2 Tax=Campylobacterales RepID=Q30SZ2_SULDN Length = 432 Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust. Identities = 201/434 (46%), Positives = 292/434 (67%), Gaps = 10/434 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF+ LG+ +L A+ + GY +PT IQ +AIP +L D+ A+AQTGTGKTA F L +L Sbjct: 1 MSFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGML 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L R+ +R +R L++ PTREL+ QI E+++ Y+K + I V+ GG + Q Sbjct: 61 QRL--RKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQK 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQN-AVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ GVD+++ATPGR+L EH + + L VEI VLDEADRMLDMGF+ +IRR+ LP Sbjct: 119 ILKEGVDIVIATPGRVL--EHVDKGLSLSHVEIFVLDEADRMLDMGFMKEIRRIHPILPK 176 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 + Q LLFSATFSD ++ L++ +L P IE +++N+ D + Q + VD ++K LL+++ Sbjct: 177 RHQTLLFSATFSDKVRKLSKLILTKPAFIETSKKNSTVDTINQVAYLVDTEKKAPLLAYI 236 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 IG N++QVLVFTRTK A+ L +L KDG++ IHG+K+Q R + L +FK G I+VL Sbjct: 237 IGSRNFRQVLVFTRTKASADLLVVELKKDGLKCGIIHGDKTQANRLKTLNEFKEGKIKVL 296 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIA+RGLDIEELP V+NYELP++PEDYVHR+GRTGRA G A+SL+ + E ++D Sbjct: 297 VATDIASRGLDIEELPFVINYELPSIPEDYVHRVGRTGRAGRDGMAISLIDIYEKFDIKD 356 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKS 419 IEKL+ +IP+ I G+EPDP+I+ + + + + + +++PR+ E G+K Sbjct: 357 IEKLIGMKIPQEIIAGFEPDPTIRR---LDQDELKLKSEHKKVEVKHERKPRKKEDGSKK 413 Query: 420 AS--AKPAEKPSRR 431 ++ KP R+ Sbjct: 414 SANYKKPVTTKKRK 427 >UniRef50_B4WCQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WCQ8_9CAUL Length = 510 Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust. Identities = 193/370 (52%), Positives = 264/370 (71%), Gaps = 1/370 (0%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+S+GL+ +L+A+A +GY +PTPIQ++AIP V++G+DL+ AQTGTGKTA F LP+L Sbjct: 17 TFESMGLNKALLQALASEGYTKPTPIQEKAIPDVMQGKDLLGIAQTGTGKTAAFALPIL- 75 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H + A R R L+L+PTRELA QIG++ + Y +L R V+FGGV Q Sbjct: 76 HRLAENRIAPKPRTTRVLVLSPTRELATQIGDSFKAYGAHLGFRVAVIFGGVKYGAQERA 135 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G+D+LVA PGRLLD Q + L EILVLDEAD+MLD+GFI IR++++++PAKR Sbjct: 136 LQQGLDILVAAPGRLLDHIQQKNLDLSSTEILVLDEADQMLDLGFIKPIRQIVSRIPAKR 195 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 QNL FSAT +I LA +LL +P++++V ++T +++Q V V++ RKR LL+ M Sbjct: 196 QNLFFSATMPTEIGKLAGELLKDPVKVQVTPQSTTVQRISQSVVHVEQGRKRALLTEMFS 255 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + + LVFT+TKHGA+ +A L G+ + AIHGNKSQ R R L FK G +RVLVA Sbjct: 256 DPEYTRCLVFTKTKHGADKVAAYLEAGGVEAGAIHGNKSQPQRERTLDAFKKGKLRVLVA 315 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TDIAARG+D++ + HVVN+ELP+VPE YVHRIGRT RA A G A+S V DE KLL+DIE Sbjct: 316 TDIAARGIDVDGVSHVVNFELPHVPEAYVHRIGRTARAGADGTAISFVAGDEMKLLKDIE 375 Query: 362 KLLKKEIPRI 371 K+ +++IP I Sbjct: 376 KVTRQKIPAI 385 >UniRef50_C9RPH4 DEAD/DEAH box helicase domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RPH4_FIBSS Length = 486 Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust. Identities = 213/434 (49%), Positives = 282/434 (64%), Gaps = 13/434 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+ L L+ + RAV GY PTPIQ+++IP++LEG+DL+ AQTGTGKTA F LP+L Sbjct: 1 MKFEELPLANPLQRAVRAVGYETPTPIQERSIPSLLEGKDLLGIAQTGTGKTAAFALPIL 60 Query: 61 QHLITRQPHAKGRRP--VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 Q L+ K R P RALIL PTRELA Q+ + R+Y+++ I + +FGGV+ NPQ Sbjct: 61 QRLLD---SGKFRSPKTCRALILLPTRELAIQVEDCFREYAQFTAISTACIFGGVNDNPQ 117 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 KL GVDVLVATPGRLLDL Q A+ L ++E VLDEADRMLDMGFIHDIR+V+ LP Sbjct: 118 KQKLIRGVDVLVATPGRLLDLIGQKAISLKKLEFFVLDEADRMLDMGFIHDIRKVVAMLP 177 Query: 179 AKRQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 RQNL FSAT ++I LA +L NP+ +EVA ++T +++ Q ++ +DK+RK LL Sbjct: 178 QDRQNLFFSATMPEEISKLAATILRPNPVRVEVAPQSTPIERIRQELYRIDKRRKGALLK 237 Query: 238 HMIGKG-NWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 ++ + ++VLVF RTKHGA+ + L K GI+ AAIHGNKSQ R AL +FK I Sbjct: 238 ELLAEHPEMKKVLVFCRTKHGADKIVRVLEKAGIKCAAIHGNKSQNRRQEALGNFKCEQI 297 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 RVLVATDIAARG+D++++ HV NY+LPN E +VHRIGRT RA G A+S DE Sbjct: 298 RVLVATDIAARGIDVDDVSHVFNYDLPNEHETFVHRIGRTARAGKEGVAISFCSPDEESD 357 Query: 357 LRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQN-GRQQRGGGGRGQGGGRGQQQ-----P 410 LR IEKL + +IP YE P + E ++ R RG R + R + Sbjct: 358 LRGIEKLTRVKIPEGDQSIYENLPPPQKETAESMMRNSRGRMSREEAQARAAETRNNRGN 417 Query: 411 RRGEGGAKSASAKP 424 R+G G ++++ P Sbjct: 418 RKGNHGKQNSNNAP 431 >UniRef50_C5TNR4 Dead/deah box helicase n=8 Tax=Neisseriaceae RepID=C5TNR4_NEIFL Length = 487 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 216/461 (46%), Positives = 284/461 (61%), Gaps = 21/461 (4%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F SLGL +++ A+ +QGY PTPIQ AIP L G DL+A+AQTGTGKTA F LP L+ Sbjct: 28 FSSLGLGSELVSALTDQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLEL 87 Query: 63 L--ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + PVR L+LTPTRELA QI +NV+ Y K L +R V+FGGV+++ Q Sbjct: 88 LKRYATSSTSPAMHPVRMLVLTPTRELADQIDQNVQAYIKNLPLRHTVLFGGVNMDKQTA 147 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR G +++VAT GRLLD Q + L++VEI+VLDEADRMLDMGFI DIR+++ LP + Sbjct: 148 DLRAGCEIVVATVGRLLDHVKQKNINLNKVEIVVLDEADRMLDMGFIDDIRKIMQMLPKQ 207 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSATFS I+ LA+ +H P +EVA +NT + V QH+ VD +KR LL +I Sbjct: 208 RQTLLFSATFSPPIRKLAQDFMHTPEMVEVAAQNTTNANVEQHIIAVDALKKRSLLERLI 267 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + QV+VF +TK + + L + I + +IHG+KSQ +R L FK G +RVLV Sbjct: 268 VDLHMNQVIVFCKTKQSVDQVTRDLVRRNIAAQSIHGDKSQQSRLETLNAFKEGTLRVLV 327 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI ELP V+NYELP PEDYVHRIGRTGRA A G A+SL+ E K+ I Sbjct: 328 ATDVAARGLDIAELPFVINYELPTQPEDYVHRIGRTGRAGADGVAISLMDKTEQKMFEAI 387 Query: 361 EKLLKKEIPRIAIPGYEP-------DPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRG 413 ++L ++ I G+EP +A+P+Q+ + R + +R Sbjct: 388 KELTGSDLNVERIEGFEPHWWDNDNQNEAEAQPVQHNDSR----------SRRDDRNKRN 437 Query: 414 EGGAKS--ASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAA 452 E KS S K EK + K AG +R R R+P A Sbjct: 438 EYANKSDKNSKKAEEKNDPGIVCGKIAGRTRRSRHERQPCA 478 >UniRef50_D1B384 DEAD/DEAH box helicase domain protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B384_SULD5 Length = 436 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 193/385 (50%), Positives = 257/385 (66%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+ LGLS I AV E GY +PTP+Q + IP VLEG+D+MA+AQTGTGKTA + LPLL Sbjct: 1 MVFEKLGLSEPIRDAVRELGYTKPTPVQNKVIPLVLEGKDVMATAQTGTGKTAAYALPLL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + + + VRALIL PTRELA+Q+G +V+ Y K + + S ++GGV PQ Sbjct: 61 HILNKKTQKSTTSKVVRALILVPTRELASQVGASVQAYGKNVPLSSAAIYGGVKFTPQAK 120 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL G+D+L+ATPGRLL+ V L +VEI+V DEADR+LDMGF +++ +L P K Sbjct: 121 KLDKGIDILIATPGRLLEHVKLGNVDLSRVEIVVFDEADRILDMGFWDEVQTLLGLFPKK 180 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFS S +K L+E L P+ + + + + +V Q ++ VDK+RK ELLS MI Sbjct: 181 RQTLLFSVGLSKSVKRLSEVSLKKPVTVAINNQGDFAKKVEQTLYLVDKERKCELLSFMI 240 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 G NW QVLVFT+TK A+ + E LN G+++ +HG+K+ RT+A+ FK IRVLV Sbjct: 241 GTHNWHQVLVFTKTKQSADEVGEYLNASGLKTLVLHGDKAHSKRTQAIHAFKENAIRVLV 300 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIA+RGLDIE+LP+V+NYELP EDY HR GRTGRA G A+SLV +E ++I Sbjct: 301 ATDIASRGLDIEDLPYVINYELPGDAEDYTHRAGRTGRAGKEGRAISLVAQEEKNKFKEI 360 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAE 385 EK+LK I PG+E ++ E Sbjct: 361 EKILKYTIKTEFYPGFETKEWVEKE 385 >UniRef50_A7K1S7 ATP-dependent RNA helicase n=13 Tax=Vibrionales RepID=A7K1S7_VIBSE Length = 416 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 190/380 (50%), Positives = 266/380 (70%), Gaps = 7/380 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGL P ++ + Y +PTPIQ IP +LEG+D++ A TG+GKTA F+LP+LQ Sbjct: 9 TFADLGLIPTLVERLEALEYSQPTPIQSHTIPYILEGKDIVGGANTGSGKTAAFSLPILQ 68 Query: 62 HLITRQPHAKGRRP--VRALILTPTRELAAQIGENVRDYSKYL--NIRSLVVFGGVSINP 117 ++ +Q RR V LIL PTRELA+Q+ NV+ YS +L I+++ VFGGVS+NP Sbjct: 69 KIV-QQDETNHRRGNFVSHLILVPTRELASQVAYNVKSYSYHLRDKIKTVAVFGGVSVNP 127 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 QM+ LRGG D++VATPGRLLDL NA+KLDQV+ LVLDEADRML +GF ++ ++L L Sbjct: 128 QMLALRGGCDIIVATPGRLLDLVSSNAIKLDQVKTLVLDEADRMLSLGFTEELNKILALL 187 Query: 178 PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 P K+Q LLFSATF D + L++ LL +P+E+++ ++ + + Q V V+K K +L+ Sbjct: 188 PEKKQTLLFSATFPDKVTTLSQHLLRDPVEVQL--QSAEASTLVQRVFSVNKGEKTAVLA 245 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 H+I + W+Q L+F K+ NHLA++L+K GI + HG+K QGARTR L FKSG+I+ Sbjct: 246 HLIKQHQWRQTLIFVNAKNACNHLAQKLSKRGITAEVFHGDKGQGARTRVLDGFKSGEIQ 305 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 VL+ATDIAARGLDIE+LP V+N++LP P DY+HRIGR+GRA G LSL+ D++ Sbjct: 306 VLIATDIAARGLDIEKLPVVINFDLPRSPADYMHRIGRSGRAGEVGLGLSLIDYDDYHHF 365 Query: 358 RDIEKLLKKEIPRIAIPGYE 377 + IEK K ++ R + G+E Sbjct: 366 KVIEKKNKFQLEREQVEGFE 385 >UniRef50_C5SI45 DEAD/DEAH box helicase domain protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SI45_9CAUL Length = 605 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 190/369 (51%), Positives = 256/369 (69%), Gaps = 1/369 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +F LGLS +L + ++GY PTPIQ QAIP +L DL+ AQTGTGKTA F LP+L Sbjct: 2 TTFKDLGLSASLLSTLEKEGYHTPTPIQAQAIPILLNKHDLLGIAQTGTGKTAAFALPIL 61 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+++ + R R L+L+PTRELA QI ++ + YSK L ++ +FGGV PQ Sbjct: 62 HHILSNR-IIPAPRSCRVLVLSPTRELATQIADSFKAYSKGLGLQIATIFGGVKYGPQYK 120 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+GG+D+LVATPGRL+D Q + L VE LVLDEAD+MLDMGFI IR+V ++LPA+ Sbjct: 121 ALQGGIDILVATPGRLIDHIEQKTIDLKAVEHLVLDEADQMLDMGFIKPIRQVASRLPAQ 180 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNL FSAT +I LA +LL NP ++E+ T +++VTQ V F++++RKR LLS + Sbjct: 181 RQNLFFSATMPKEIAGLANELLTNPKKVEITPEATTAERVTQQVIFIEQQRKRALLSELY 240 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + L+FTRTK GA+ +A L G+ +AAIHG+K+Q R RAL FK+G +R LV Sbjct: 241 ADEKLARTLIFTRTKRGADRVAAYLQAGGVEAAAIHGDKNQSQRERALQAFKAGRVRALV 300 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D++ + HV+NYELP V E YVHRIGRT RA G +++LV DE KLL+DI Sbjct: 301 ATDIAARGIDVDNVTHVINYELPFVAEAYVHRIGRTARAGKEGHSITLVADDERKLLKDI 360 Query: 361 EKLLKKEIP 369 E++ ++ IP Sbjct: 361 ERITRQRIP 369 >UniRef50_A7IK90 DEAD/DEAH box helicase domain protein n=36 Tax=Alphaproteobacteria RepID=A7IK90_XANP2 Length = 559 Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust. Identities = 218/459 (47%), Positives = 288/459 (62%), Gaps = 28/459 (6%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF +LGL+ I+RA+ E + PTPIQ +AIP +L GRDL+ AQTGTGKTA F LP+L Sbjct: 38 SFSNLGLAEPIVRALTEAQHVTPTPIQAEAIPQILAGRDLIGIAQTGTGKTAAFALPILD 97 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L+ R PH + VRAL+L+PTREL+ QI EN + ++ NI + GGV + Q+ Sbjct: 98 RLV-RHPHRPEPKSVRALVLSPTRELSGQIVENFEKFGRHANISVSLAIGGVPMGRQIRA 156 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GVDVLVATPGRL+DL +AVKLDQVE+LVLDEAD+MLDMGF+H IR ++ +LP KR Sbjct: 157 LSRGVDVLVATPGRLIDLVENHAVKLDQVEVLVLDEADQMLDMGFVHAIRAIVRRLPHKR 216 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 +L FSAT I LA +L +P+ + V +D+V Q V VDK K +LL+ ++ Sbjct: 217 HSLFFSATMPHAIAELAGSMLRDPVRVAVTPVAKTADRVEQRVILVDKANKGQLLAEVLS 276 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + + LVF+RTKHGA+ + L K GI + AIHGNKSQ R R LA F+ G IR L+A Sbjct: 277 TEDIDRALVFSRTKHGADKVVRVLAKAGIAAEAIHGNKSQNQRDRVLAAFREGKIRTLIA 336 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TDIAARG+D+ + HV+N++LPNVPE YVHRIGRT RA G A+S +E LR IE Sbjct: 337 TDIAARGIDVTGVSHVINFDLPNVPESYVHRIGRTARAGREGIAISFCDHEERAFLRSIE 396 Query: 362 KLLKKEIP---------RIAIPGYEP-------DPSIKAEPI-----QNGRQQRGGGGRG 400 KL+K ++P R A+P EP + S +++ I QN R QR G Sbjct: 397 KLIKMQLPSSDRRGAGTRFAVPELEPIILDERDETSERSDYIGRSGRQNPRGQRPRHGDE 456 Query: 401 QGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAG 439 + G + PR EG ++A A +P G+ +PAG Sbjct: 457 RSGEGRSRAPRSEEGRPQAAR---AHQPR---GEGRPAG 489 >UniRef50_C6XMJ7 DEAD/DEAH box helicase domain protein n=23 Tax=Bacteria RepID=C6XMJ7_HIRBI Length = 769 Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust. Identities = 193/372 (51%), Positives = 253/372 (68%), Gaps = 1/372 (0%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L+ +L+A+ ++GY PTPIQ QAIP V+EG D++ AQTGTGKTA F LPLL H Sbjct: 4 FSDFDLASPVLKALDKEGYETPTPIQAQAIPLVMEGGDILGIAQTGTGKTAAFALPLLHH 63 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 L + P G VR L++ PTRELA+QI E Y + L++R L VFGGV I QM L Sbjct: 64 LC-KLPDMPGPGAVRCLVIAPTRELASQIAEAFSKYGQCLSLRVLKVFGGVPIRKQMRDL 122 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 G DVLVATPGRL+DL Q AV L VE LVLDEAD+MLD+GFIH +RR+ +P +RQ Sbjct: 123 HRGADVLVATPGRLIDLMEQGAVDLSYVEKLVLDEADQMLDLGFIHPLRRIAAAVPKERQ 182 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 L FSAT ++ LA + L NP ++ +A+ +T +++VTQ + V++ +K LL + Sbjct: 183 TLFFSATMPSNVSGLANQFLTNPKKVSIAQESTTAERVTQTMSHVNQAQKGPLLLVNLQD 242 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 + + LVFTRTKHGA+ + +L GIR AIHGNKSQ R RAL F++GD +VLVAT Sbjct: 243 ESIDRALVFTRTKHGADKVVSKLMNAGIRCGAIHGNKSQAQRERALNAFRNGDSKVLVAT 302 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 DIAARG+D+ + HV NYE+PNVPE YVHRIGRT RA G+A+S V DE K L DI++ Sbjct: 303 DIAARGIDVPGVSHVFNYEIPNVPEQYVHRIGRTARAGREGKAISFVSRDEKKYLLDIQR 362 Query: 363 LLKKEIPRIAIP 374 ++ +IP + +P Sbjct: 363 QIRMKIPIVDLP 374 >UniRef50_A8H2J8 DEAD/DEAH box helicase domain protein n=34 Tax=Gammaproteobacteria RepID=A8H2J8_SHEPA Length = 442 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 184/379 (48%), Positives = 255/379 (67%), Gaps = 4/379 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LGL P++L + Y +PT IQ IPAVL+G+D++ A+TG+GKTA F LP++Q Sbjct: 25 FTQLGLIPELLETLKLLSYTKPTAIQSHIIPAVLDGKDVLGGAKTGSGKTAAFALPIIQK 84 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL--NIRSLVVFGGVSINPQMM 120 L P G V L+L PTRELA Q+ ++ YS+ + N+++L V+GGVS N QM Sbjct: 85 LAKASPRKAGGNFVSCLVLVPTRELAQQVADSFMRYSQLIKPNLKTLAVYGGVSTNVQMQ 144 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LRGG D++VATPGRL+DL NA+KLD LVLDEADRML +GF ++ +L KLP Sbjct: 145 SLRGGADIVVATPGRLIDLISSNALKLDNTTTLVLDEADRMLSLGFTEELNELLAKLPKT 204 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 +Q LLFSATF ++++ L + LL+NP+E+++ +++ + Q V V++ RK LL+ +I Sbjct: 205 KQTLLFSATFPEEVRELTDSLLNNPVEVQL--QSSEESTLVQRVITVNRNRKTALLAQLI 262 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 WQQVL+F K+ N LA++L GI + H +K QGAR R L +FKSG+I VL+ Sbjct: 263 KDNQWQQVLIFASAKYSCNRLAQKLENAGITAEVFHSDKGQGARNRVLEEFKSGEISVLI 322 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+DIE+LP V+N+ELP P DY+HRIGR+GRA G A+SL+ DE++ + I Sbjct: 323 ATDIAARGIDIEKLPIVINFELPRSPVDYMHRIGRSGRAGEAGLAMSLISHDEYQHFKLI 382 Query: 361 EKLLKKEIPRIAIPGYEPD 379 EK K + R IPG+E D Sbjct: 383 EKKNKLRLEREQIPGFEAD 401 >UniRef50_C6WW85 DEAD/DEAH box helicase domain protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WW85_METML Length = 576 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 199/402 (49%), Positives = 261/402 (64%), Gaps = 4/402 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF+SL L+P ILRA+ E GY PTPIQ QAIP V+EG DLMASAQTGTGKTAGF LP L Sbjct: 1 MSFESLNLNPAILRAIEETGYTTPTPIQAQAIPVVMEGHDLMASAQTGTGKTAGFMLPAL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L T PH R R L+LTPTRELAAQ+ E R Y K+L R++ + GG+ Q Sbjct: 61 NLLAT--PHESRSRGPRILVLTPTRELAAQVNEAARKYGKFLRARTVSIVGGMPYPLQNK 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L +D+LVATPGRLLD + + L ++++L+LDEADRMLDMGF+ D+ R+ +L A+ Sbjct: 119 LLSQPLDILVATPGRLLDHMERGRIDLSRLQMLILDEADRMLDMGFLPDVERICEQLSAE 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLSHM 239 RQ LLFSAT DI +A+++L NP ++VA + + Q +HFVD K +LL H+ Sbjct: 179 RQTLLFSATLDGDIARIAQQILKNPKTVQVAAQKEKHANIEQRLHFVDDMTHKNKLLEHL 238 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + Q ++FT TK A+ LAE L G ++AA+HG+ +QGAR R L + GD++VL Sbjct: 239 LIAPEVNQTIIFTSTKRHADVLAEDLYAAGHKTAALHGDMTQGARNRTLTKLRHGDVKVL 298 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+ + HV+NY+LP EDYVHRIGRTGRA TG A+S + LLR Sbjct: 299 VATDVAARGIDVHGITHVINYDLPKFAEDYVHRIGRTGRANNTGIAISFASNMDRHLLRK 358 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQ-RGGGGRG 400 IE+ + I G+EP +K + GR+ GGRG Sbjct: 359 IEQYTGNRLEASVIEGFEPKRPVKMDGPSGGRRDGHKAGGRG 400 >UniRef50_C1AE59 ATP-dependent RNA helicase RhlE n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AE59_GEMAT Length = 498 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 192/378 (50%), Positives = 259/378 (68%), Gaps = 6/378 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F SL L P + + + E G+ PTPIQ +AIP LEGRD++A A TG+GKT F LP+L Sbjct: 3 MTFSSLQLHPSLQQGLKELGFARPTPIQGEAIPPALEGRDVLACAMTGSGKTYAFLLPIL 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L++ K R RAL+LTPTRELAAQI E+++D + + + VFGGV + PQ Sbjct: 63 HQLMS-----KPRGNTRALVLTPTRELAAQILESLQDVTTHTPLTGAAVFGGVGMGPQEH 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA- 179 R GVDV+VATPGRLLD Q KLDQ+E LVLDEADRMLDMGF+ +I+++L LP Sbjct: 118 AFRSGVDVIVATPGRLLDHFRQPYAKLDQLEYLVLDEADRMLDMGFLPEIKKILRHLPNR 177 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 KRQ L FSAT I AL +++L+ P+ + + R+ + +TQ V+ V ++ K LL + Sbjct: 178 KRQTLFFSATMPPPIAALTQEMLNKPVTLNLQRQAAPAKGITQAVYPVSQELKSALLVAL 237 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + +G+ Q LVFTRTKH AN LA QL GI++ IHGN+SQ RT+ALA FK G +VL Sbjct: 238 LKRGDMPQALVFTRTKHRANRLASQLVTAGIKAERIHGNRSQSQRTQALAGFKDGSYQVL 297 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARG+D+E L HVVN+++P EDY+HR+GRT RA ATGEA + V +E L+ Sbjct: 298 VATDIAARGIDVEALGHVVNFDVPVAAEDYIHRVGRTARAEATGEAFTFVSPEEEGELKL 357 Query: 360 IEKLLKKEIPRIAIPGYE 377 IE+ +K+ +PR+ +P ++ Sbjct: 358 IERAIKRALPRVTVPDFD 375 >UniRef50_A9M0D7 ATP-dependent RNA helicase, putative n=21 Tax=Neisseria RepID=A9M0D7_NEIM0 Length = 457 Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust. Identities = 193/378 (51%), Positives = 255/378 (67%), Gaps = 2/378 (0%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F SLGL +++ A+ QGY PTPIQ AIP L G DL+A+AQTGTGKTA F LP L+ Sbjct: 5 FSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLER 64 Query: 63 L--ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + PVR L+LTPTRELA QI +NV+ Y K L +R V+FGG++++ Q Sbjct: 65 LKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLPLRHTVLFGGMNMDKQTA 124 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR G +++VAT GRLLD Q + L++VEI+VLDEADRMLDMGFI DIR+++ LP + Sbjct: 125 DLRAGCEIVVATVGRLLDHVKQKNIHLNKVEIVVLDEADRMLDMGFIDDIRKIMQMLPRQ 184 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSATFS I+ LA+ ++ P +EVA +NT + V QH+ VD +KR LL +I Sbjct: 185 RQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQNTTNANVEQHIIAVDTIQKRNLLERLI 244 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + QV+VF +TK + + +L + + + AIHG++SQ +R L FK G++RVLV Sbjct: 245 VDLHMNQVIVFCKTKQSVDRVTRELVRRNLSAQAIHGDRSQQSRLETLNAFKDGNLRVLV 304 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARGLDI ELP V+NYE+P PEDYVHRIGRTGRA A G A+SL+ E K+ I Sbjct: 305 ATDIAARGLDIAELPFVINYEMPAQPEDYVHRIGRTGRAGADGVAISLMDESEQKMFESI 364 Query: 361 EKLLKKEIPRIAIPGYEP 378 ++L ++ I G+EP Sbjct: 365 KELTGNKLLIERIEGFEP 382 >UniRef50_Q11TW3 Possible ATP-dependent RNA helicase n=10 Tax=Bacteria RepID=Q11TW3_CYTH3 Length = 388 Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust. Identities = 190/370 (51%), Positives = 261/370 (70%), Gaps = 5/370 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF +LGLSP IL+A+ +Q Y P PIQ+QAIPA+L+G+D++ AQTG+GKTA F LP+L Sbjct: 9 MSFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPIL 68 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL--NIRSLVVFGGVSINPQ 118 Q L T+ P K R + AL+L PTRELA Q+G+ + +S L I+SL V+GGVSINPQ Sbjct: 69 QMLQTK-PLGKNRH-INALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINPQ 126 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 M++L+G V++L+ATPGRLLDL AV L VE+LVLDEAD+ML++GF ++ + LP Sbjct: 127 MIQLQG-VEILIATPGRLLDLVDSKAVYLSDVEVLVLDEADKMLNLGFKEEMANIFKLLP 185 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 KRQNLLFSAT D+ + E LLH+P++IE+ D + Q + V+ RK LL + Sbjct: 186 QKRQNLLFSATLGKDVDTITEFLLHDPVKIEIIAEEQNIDLIQQIAYAVEDARKGPLLRY 245 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 +I + QVL+FT + H A+ + E+L + I +AA+H KSQGART AL FK+G+I V Sbjct: 246 LIKEQKMNQVLIFTSSVHRADAVVEKLKANNILAAALHSKKSQGARTEALKQFKAGNIHV 305 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+ +RG+DI LP V+NYELP P+DY+HRIGRTGRA A+G A++L+ +E Sbjct: 306 LVATDLMSRGIDIPFLPFVINYELPRSPKDYIHRIGRTGRAEASGVAINLISEEETHHFS 365 Query: 359 DIEKLLKKEI 368 I+K + K++ Sbjct: 366 VIQKKMGKKV 375 >UniRef50_Q2YZZ9 Putative uncharacterized protein n=2 Tax=Bacteria RepID=Q2YZZ9_9BACT Length = 453 Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust. Identities = 198/377 (52%), Positives = 256/377 (67%), Gaps = 5/377 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F SL L P +L+A+ E G+ PTPIQ AIP + GRD+MASA TG+GKTA F LP+L Sbjct: 1 MPFSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 LI R R RAL++TPTRELAAQI E++ D + + I + VFGGVSI PQ Sbjct: 61 HQLIDRP-----RGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEH 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 R GVDVL+ TPGRLLD KL +E LVLDEADRMLDMGF+ DIRR+L +PA+ Sbjct: 116 AFRRGVDVLIGTPGRLLDHFRAPYAKLAGLEHLVLDEADRMLDMGFLPDIRRILKHIPAR 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ L FSAT I LA ++L NP + + R + +TQ V+ V ++ K LL ++ Sbjct: 176 RQTLFFSATMPAPIGVLAREMLRNPATVNINRIAAPAAGITQAVYPVAQELKAALLVALL 235 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + + LVFTRTKH AN LAE L + GI++ IHGN+SQG RT ALA FK+G RVLV Sbjct: 236 KRDDIRDALVFTRTKHRANRLAEHLVRQGIKAERIHGNRSQGRRTEALAGFKAGKYRVLV 295 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ EL HVVN+++P VP+DY+HR+GRT RA ATG+A + V E L I Sbjct: 296 ATDIAARGIDVTELGHVVNFDVPLVPDDYIHRVGRTARAEATGDAFTFVSPQEQGDLTRI 355 Query: 361 EKLLKKEIPRIAIPGYE 377 E+++ K++PRI +P ++ Sbjct: 356 ERVIGKQLPRITVPDFD 372 >UniRef50_C3RH47 ATP-dependent RNA helicase RhlE n=2 Tax=Bacteria RepID=C3RH47_9MOLU Length = 418 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 180/356 (50%), Positives = 244/356 (68%) Query: 21 YREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALI 80 Y P+PIQ+QAIPA++ GRD+ A+TGTGKTA F LP+LQ L R K R ++ALI Sbjct: 3 YDIPSPIQEQAIPAIISGRDIFGCAKTGTGKTAAFALPILQKLYLRDESEKYPRTIKALI 62 Query: 81 LTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLE 140 L PTRELA QI E + +N++S V+FGGV Q+ K+ G+DVL+ATPGRL+DL Sbjct: 63 LAPTRELAIQINETFEAMNPQVNLKSAVIFGGVRQGSQVTKINRGIDVLIATPGRLIDLY 122 Query: 141 HQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEK 200 +Q V L VE LVLDEADRMLDMGFI DIR++L +P + Q +LFSAT D+IK L Sbjct: 123 NQGLVDLKHVEYLVLDEADRMLDMGFIKDIRKILRFIPRRHQTMLFSATLPDEIKHLVSD 182 Query: 201 LLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANH 260 LL++PL+I ++ N +++ Q ++FVDK K +LL ++ +VF RTK + Sbjct: 183 LLNDPLKIMISSGNVTVEKINQSLYFVDKVNKAKLLIKLLENPQIYNAIVFVRTKRNVDT 242 Query: 261 LAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNY 320 L ++L K I IHG+KSQ AR RAL +FK+ +RVLVA+DIAARG+DI+EL HV+N+ Sbjct: 243 LCKKLIKAQITCEGIHGDKSQNARVRALNNFKNDKVRVLVASDIAARGIDIDELTHVINF 302 Query: 321 ELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGY 376 +LP+ E+YVHRIGRT RA A+GEA++ E LL+DI+K + ++IP + P Y Sbjct: 303 DLPDQAENYVHRIGRTARAGASGEAITFCSFQEKALLKDIQKFINQDIPVVDNPYY 358 >UniRef50_B6R5V0 ATP-dependent rna helicase, dead/deah box family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R5V0_9RHOB Length = 453 Score = 366 bits (939), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 200/459 (43%), Positives = 283/459 (61%), Gaps = 20/459 (4%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 FD LG++ A+ +GY EPTPIQ+ AIP +L+G+DL+ AQTGTGKTA F +PLLQ Sbjct: 4 FDKLGVAKPFQIALKSKGYSEPTPIQENAIPYILDGKDLLGLAQTGTGKTAAFAVPLLQR 63 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 L+ + A + VR+LILTPTRELA QI +N++ Y+ + + V GGV PQ L Sbjct: 64 LLESRYRA-APKSVRSLILTPTRELADQITKNIKAYAGRTKMYTSCVVGGVPFPPQFHAL 122 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 + G+DVLVATPGRLLDL +N V D++EI VLDEAD+MLD+GFI ++ + LP KRQ Sbjct: 123 QRGLDVLVATPGRLLDLHRKNGVSFDELEIFVLDEADQMLDLGFIAELEEIAYLLPKKRQ 182 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 L FSAT +I+ L+E+ L NP+E+ A T + VTQ + ++K K LL ++ K Sbjct: 183 TLFFSATMPREIRDLSERFLTNPVEVSTAPPATTVETVTQQIAHLEKDAKFPLLKELLEK 242 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 ++ LVFT TK G+ LA +LN DG+ + AIHG+ SQ R + L FK G ++ LVAT Sbjct: 243 DECERALVFTLTKKGSARLAARLNADGVPAEAIHGDMSQAERQKTLDKFKRGKLKTLVAT 302 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARG+D+ ++ HV+N+++PN E+YVHRIGRT RA +G A++ ++ +LR I+K Sbjct: 303 DVAARGIDVSDISHVINFDMPNATENYVHRIGRTARAGKSGTAITFCLPEDRGMLRAIQK 362 Query: 363 LLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA-- 420 L+ K+I + G+ PS + EP + G R +G G PR+G G K A Sbjct: 363 LIGKKIAEMD--GFTFFPSDR-EPKSARSNAQVAGKRAKGSG-----PRKGPGNGKFAQK 414 Query: 421 --------SAKPAEKPSRRLGDAK-PAGEQQRRRRPRKP 450 + P PS+ +A PAG+ + +KP Sbjct: 415 PKGKPTGKKSPPRRSPSKSSDNASAPAGDTGGYLKRKKP 453 >UniRef50_C6C1F3 DEAD/DEAH box helicase domain protein n=2 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1F3_DESAD Length = 493 Score = 366 bits (939), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 208/449 (46%), Positives = 280/449 (62%), Gaps = 29/449 (6%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF I+ + GY PTPIQ +AIP VL+GRD+M AQTGTGKTA F LP++ Sbjct: 1 MSFKQFSFDRRIMAGIHACGYETPTPIQTKAIPEVLKGRDVMGLAQTGTGKTAAFALPIM 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L+ ++ +G P+R L+L PTRELA QI EN + IRS VFGGV PQ+ Sbjct: 61 QRLLEKKFSGQG--PIRVLVLAPTRELALQIHENFMELGVEAGIRSAAVFGGVGAMPQIQ 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 R V+VA PGRLLDL +Q +KLD+V+ LVLDEADRMLDMGF+ DIR++++KLP + Sbjct: 119 AARRS-SVIVACPGRLLDLMNQGVIKLDKVDTLVLDEADRMLDMGFLPDIRKIMSKLPQR 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHF-VDKKRKRELLSHM 239 RQNLLFSAT DDI+ LA+K+L+ P ++VA NTA + +HV + V + K LL + Sbjct: 178 RQNLLFSATMPDDIRDLADKILYRPATVQVA--NTAPAKTVEHVFYPVSQHLKNNLLFKV 235 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + ++ +LVFTRTKH A +LA +L G ++ + GN SQ R RAL F+ G +V+ Sbjct: 236 LEQTDYDSLLVFTRTKHKAKNLARRLAARGHKATFLQGNMSQNQRQRALDGFRDGSFKVM 295 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARG+D + + HVVN ++P+ E Y HRIGRTGRA +G A S V D+ +L+R+ Sbjct: 296 VATDIAARGIDCDRITHVVNLDVPDTAETYTHRIGRTGRAGRSGSAFSFVTRDDLRLMRE 355 Query: 360 IEKLLKKEIPRIAIPGYEPD-PSIKAEPIQNGRQQRGGGGRGQGGGR---GQQQPRRGEG 415 IEK + I + ++ D P+ P + GGGR R G+++P RG Sbjct: 356 IEKAVGYSIEHRTLEDFDYDKPNTHPAPAKR------GGGRKPAADRKPAGERRPGRGR- 408 Query: 416 GAKSASAKPAEKPSRRLGDA--KPAGEQQ 442 KPAE R GD KPAGE++ Sbjct: 409 -------KPAEA---RDGDESRKPAGERK 427 >UniRef50_A5G1U8 DEAD/DEAH box helicase domain protein n=7 Tax=Alphaproteobacteria RepID=A5G1U8_ACICJ Length = 525 Score = 365 bits (936), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 191/373 (51%), Positives = 250/373 (67%), Gaps = 5/373 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +LGL+ +LRA++EQ Y PTPIQ ++IP +LEG DL+ AQTGTGKTA F LP+L H Sbjct: 59 FTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAAFVLPIL-H 117 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 I R RAL+L PTRELA QI + R Y K+ VV GG PQ ++ Sbjct: 118 RIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKPGPQARRM 177 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 GVD+LVATPGRLLD ++LD VE +VLDEAD+MLD+GFI IR+++ KLP +RQ Sbjct: 178 ESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMAKLPRQRQ 237 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 ++FSAT I+ALA + L +P E+ V+ + D++ Q V + + K++ L+ ++ Sbjct: 238 AVMFSATMPKPIRALAGEFLRDPREVAVSVESKPVDRIDQQVLLLAPEEKKDKLAWLLAD 297 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 ++ +VFTRTKHGA+ + L GI +AAIHGNKSQG R RAL F+SG IRVLVAT Sbjct: 298 VAVERAIVFTRTKHGADKVTRHLEDAGIGAAAIHGNKSQGQRERALDQFRSGRIRVLVAT 357 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 DIAARG+D++ + HVVN+ELPNVPE YVHRIGRT RA A G A+SLV E LRDIE Sbjct: 358 DIAARGIDVDNVSHVVNFELPNVPESYVHRIGRTARAGAEGVAISLVEPSELPYLRDIET 417 Query: 363 LLKKEIPRIAIPG 375 L+ + + +PG Sbjct: 418 LIGRHL----VPG 426 >UniRef50_Q7UJ92 Putative ATP-dependent RNA helicase rhlE n=1 Tax=Rhodopirellula baltica RepID=Q7UJ92_RHOBA Length = 485 Score = 365 bits (936), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 191/391 (48%), Positives = 259/391 (66%), Gaps = 15/391 (3%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F+ LGL+ +L+ + + GY PTPIQ Q+IP +L+G D++ +AQTGTGKTA F LP+LQ Sbjct: 4 FEDLGLTGPLLQGLEQAGYETPTPIQAQSIPEILDGNDVLGAAQTGTGKTAAFALPILQ- 62 Query: 63 LITRQPHAKGRRPVR------------ALILTPTRELAAQIGENVRDYSKYLNIRSLVVF 110 I + + R P + L+L+PTREL+AQI N R Y K +RS V+F Sbjct: 63 -IMWEDDQERREPSKRRGGRPGRRPIRTLVLSPTRELSAQIEANFRIYGKKTRLRSTVIF 121 Query: 111 GGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDI 170 GGV+ NPQ+ +L+ GVD LVATPGRLLDL +Q + L VEILVLDEAD MLDMGF+ D+ Sbjct: 122 GGVNQNPQVRELQSGVDTLVATPGRLLDLVNQGFIDLKDVEILVLDEADHMLDMGFLPDV 181 Query: 171 RRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK 230 +R+L LP RQNLLFSAT I+ LA+++L +P+ I++A + +++ Q + FV + Sbjct: 182 KRILKFLPRDRQNLLFSATMPGPIRKLADEILVDPVTIQIAPQKPTVERIEQSICFVAQA 241 Query: 231 RKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALAD 290 K LL+H I LVFTRTKHGA+ +A +L K G+++AAIHGNK+Q R R L Sbjct: 242 DKPRLLNHFIETKATGSTLVFTRTKHGADAVARRLVKAGVKAAAIHGNKTQANRVRTLNK 301 Query: 291 FKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC 350 FK+ ++ VLVATD+AARG+DI+ + V+NY+ PN PE YVHRIGRTGRA GE + Sbjct: 302 FKNDELDVLVATDVAARGIDIDGIQTVINYDTPNTPEAYVHRIGRTGRAGREGETVMFCG 361 Query: 351 VDEHKLLRDIEKLLKKEIP-RIAIPGYEPDP 380 E K IE+ +K +IP +PG +P P Sbjct: 362 GHETKFFIAIEREIKLQIPVATGLPGCQPRP 392 >UniRef50_Q2NB74 DNA and RNA helicase n=7 Tax=Alphaproteobacteria RepID=Q2NB74_ERYLH Length = 492 Score = 360 bits (925), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 201/445 (45%), Positives = 272/445 (61%), Gaps = 14/445 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD LGLS +L+A+ +GY EPTPIQ QAIP VLEGRDL+ AQTGTGKTA F LP Sbjct: 5 TFDQLGLSQPVLQALDMKGYNEPTPIQAQAIPPVLEGRDLLGIAQTGTGKTAAFMLPS-- 62 Query: 62 HLITRQPHAKGRRP---VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 I R A + P R L+L PTRELA QI ++ +DY ++ + GG S+ Sbjct: 63 --IDRLREADNQTPFKSCRMLVLAPTRELAGQIAQSAKDYGAMAGLKVHSIVGGTSVGKD 120 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 KL G D+LVATPGRLLDL Q A KL+ VEILVLDEAD+MLD+GFIH +R++ +P Sbjct: 121 RNKLHRGTDILVATPGRLLDLIDQKAFKLNAVEILVLDEADQMLDLGFIHALRQINDLVP 180 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 A+RQ L FSAT I+ L K NP+++ V T ++++ Q++ V + K+ L+ Sbjct: 181 AERQTLFFSATMPKQIQELVGKYCRNPVKVSVTPAATTAERIDQYLFMVQQDEKQALIEM 240 Query: 239 MIG-----KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKS 293 ++ G +++LVFTRTKHGA+ + ++L + GI S AIHGNKSQ R RAL +FK Sbjct: 241 ILKGRHAVPGKQERILVFTRTKHGADRVVKKLRQAGIESNAIHGNKSQPQRQRALDEFKR 300 Query: 294 GDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDE 353 +L+ATD+AARG+DI + HV+NYELPNVPE YVHRIGRT RA G A++ DE Sbjct: 301 AKTPILIATDVAARGIDIPGVSHVINYELPNVPEQYVHRIGRTARAGKDGVAIAFCAEDE 360 Query: 354 HKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRG 413 L+DI+K E R+ +P P + ++QRG + + R Q R Sbjct: 361 RAYLKDIQKNTDAEFDRLPLPENFRAVVEGVGPTKREQKQRGPRIKPKPKARKQGGTNRS 420 Query: 414 --EGGAKSASAKPAEKPSRRLGDAK 436 +GG ++ P E P ++ G +K Sbjct: 421 KPQGGNPQSAGGPVENPVKKQGTSK 445 >UniRef50_Q2BMZ1 ATP-dependent RNA helicase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMZ1_9GAMM Length = 417 Score = 358 bits (920), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 186/379 (49%), Positives = 251/379 (66%), Gaps = 4/379 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF SLGLS ++ GY+EPT IQ +AIPAVL+G DL+A+A+TG+GKTAGF LPLL Sbjct: 1 MSFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL--NIRSLVVFGGVSINPQ 118 + L A G AL+L PTRELA Q+ ++V YS+ IRS+ ++GG +INPQ Sbjct: 61 EKL--HSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQ 118 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 M L G D++VATPGRLLDL +NA+ L ++ LVLDEADRMLD+GF ++ +L + P Sbjct: 119 MQSLSKGCDIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLDLGFADELDDILDQTP 178 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 Q LLFSATF D +K L E+LL NP+EI V + T DQ+ Q VD+ + LL H Sbjct: 179 GNVQTLLFSATFPDKVKELTEELLRNPVEISVKQEATLPDQLHQRAIEVDRNNRTMLLKH 238 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 +I + WQQ+L+F +K AN++ +L + GI+S+ +HG+ +Q R AL DF G ++ Sbjct: 239 LIKQEKWQQLLIFVGSKRTANNIELKLYRSGIQSSTLHGDLTQKERLGALEDFSKGRCKI 298 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 L+ATD+AARG+DI LP V+NY+LP DYVHR GRT RA G A+S V + + Sbjct: 299 LIATDLAARGIDIPSLPCVLNYDLPRATSDYVHRAGRTARAGEAGLAISFVDHESDAHFK 358 Query: 359 DIEKLLKKEIPRIAIPGYE 377 IEK ++ +IPR IPG+E Sbjct: 359 LIEKRIRMKIPREQIPGFE 377 >UniRef50_C4XQY7 ATP-dependent RNA helicase n=7 Tax=Deltaproteobacteria RepID=C4XQY7_DESMR Length = 496 Score = 358 bits (920), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 206/462 (44%), Positives = 281/462 (60%), Gaps = 18/462 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSFDS L ++ + GY PTPIQ +A+P V+EG DLM AQTGTGKTA F LP+L Sbjct: 1 MSFDSFCLHDSLIANIKRAGYETPTPIQAEAVPHVMEGHDLMGLAQTGTGKTAAFLLPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 LIT A+ R P R LIL PTRELA QI + D+ + +R+ V++GGV + PQ+ Sbjct: 61 HRLITNP--ARTRSP-RTLILAPTRELAEQIFRSTLDFMRGTRLRATVIYGGVGMFPQVR 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR GVDV+VA PGRLLD +Q V+ D +E LVLDEAD M DMGF+ DI+R+L LPAK Sbjct: 118 ALRQGVDVIVACPGRLLDHLNQGNVRFDGLETLVLDEADHMFDMGFLPDIKRILAALPAK 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT I LA + L +P+ + + S V ++ V +K LL H++ Sbjct: 178 RQTLLFSATMPPAISGLAAETLTDPVTVRIGHLAPLS-TVEHAIYPVSHNQKAPLLLHLL 236 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 G+ + V+VFTRTKH A +LA+QL + G ++ + GN SQ R A+ F+ G ++LV Sbjct: 237 GEAGKESVIVFTRTKHRAKNLAQQLCRSGHKATCLQGNLSQRQRQIAMDGFRRGSFQILV 296 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ ++ HVVN+++P+ E Y HRIGRTGRA G+A + V ++ ++R I Sbjct: 297 ATDIAARGIDVSQVAHVVNFDIPDTAEAYTHRIGRTGRAERDGQAHTFVTGEDMGMVRAI 356 Query: 361 EKLLKKEIPRIAIPGYEPDPS----IKAEPIQNGRQQRGGGGRGQGG-GRGQQQPRRGEG 415 E +KK +PR + G+EP+P P R ++G G QGG G Q+Q R G Sbjct: 357 ESHMKKPLPRRNVEGFEPEPGEFRRSAPAPRSAARPRQGYGAPRQGGYGDRQRQGDRPYG 416 Query: 416 ---------GAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPR 448 GA++ SA+ S R +PA ++ R RPR Sbjct: 417 DRPRGPRPEGARADSARDDRPRSDRPRSDRPAADRPRSDRPR 458 >UniRef50_B2S5R2 ATP-dependent RNA helicase, DEAD/DEAH box family n=54 Tax=cellular organisms RepID=B2S5R2_BRUA1 Length = 531 Score = 358 bits (919), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 202/435 (46%), Positives = 275/435 (63%), Gaps = 10/435 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +LG++ +L+ V G EP PIQ QAIP+ LEG+D++ AQTG+GKTA F+LP+LQ Sbjct: 89 FAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLPILQK 148 Query: 63 LITRQPHAKGRRP--VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 +I RRP RALIL PTRELA QI + +R+ SK +I + +V GGVS Q+ Sbjct: 149 IIGL---GDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSKLSQIK 205 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 ++ G+DVL+ATPGRL DL V L Q LVLDEADRMLDMGFI+D++R+ A+ Sbjct: 206 RIAPGIDVLIATPGRLTDLMRDGLVDLSQTRWLVLDEADRMLDMGFINDVKRIAKATHAE 265 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LFSAT +I +LAE+LL +P+ +EVA + T + ++TQ VH V K KR LLS M+ Sbjct: 266 RQTALFSATMPKEIASLAERLLRDPVRVEVAPQGTTASEITQVVHPVPTKEKRRLLSAML 325 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + V+VFTRTKHGA+ + L +D AAIHGNKSQ AR RAL F+ G +R+LV Sbjct: 326 TDADMRSVIVFTRTKHGADAVVRHLERDRYDVAAIHGNKSQNARQRALNGFRDGTLRILV 385 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLV-CVDEHKLLRD 359 ATDIAARG+D+ + HVVNY+LP+ PE YVHRIGRTGR A+G +++L E LR Sbjct: 386 ATDIAARGIDVPGISHVVNYDLPDEPETYVHRIGRTGRNGASGASITLYDPATEESKLRA 445 Query: 360 IEKLLKKEIPRIAIP-GYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE---G 415 +E++ + ++ P P P K Q R ++ + + + GE Sbjct: 446 VERVTRSKLSIKDAPVKLAPAPVAKGPAPQGQRTEQAESRKAPAHKHRRPAQKAGEQHRA 505 Query: 416 GAKSASAKPAEKPSR 430 GA +++ + A KP R Sbjct: 506 GAHASAGEAAPKPKR 520 >UniRef50_B3PER7 ATP-dependent RNA helicase, DEAD box family n=12 Tax=Gammaproteobacteria RepID=B3PER7_CELJU Length = 477 Score = 358 bits (919), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 182/381 (47%), Positives = 254/381 (66%), Gaps = 1/381 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F +LGL+P++LRAV G+++ TP+Q+QAIP GRDL+ +AQTGTGKTA F PLL Sbjct: 29 MNFAALGLAPELLRAVKRCGFQQLTPVQEQAIPPARRGRDLLVTAQTGTGKTAAFGFPLL 88 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L+ +P A RAL+L PTREL Q+ +N++ Y+ + ++ V+GGV + Q Sbjct: 89 QQLL-EKPRATQPGHTRALVLAPTRELVEQVADNLQQYAHFTSLTIAAVYGGVKHSSQAN 147 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL+ G+DVLVATPGRLL+ + L QVE LVLDEADRMLDMGF+ +I ++L + K Sbjct: 148 KLQAGLDVLVATPGRLLEHVELGNINLQQVEFLVLDEADRMLDMGFVGEISKLLNGMGKK 207 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q L FSAT + + LA+++L PL + V++RN +D V ++ VD+ RK EL ++ Sbjct: 208 PQILFFSATLTQSVTTLAKEILARPLSVAVSKRNAVADTVEHLLYPVDQARKYELFMELL 267 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 NW QV+VF+ T+ A+ L L +D + A IH K+QGAR RAL +FK G ++VLV Sbjct: 268 RTHNWFQVMVFSSTREEADKLINALKEDNVEGAVIHSEKTQGARRRALKEFKEGKLQVLV 327 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 AT++AARGLDI+ L +VVN +LP EDYVHR+GRTGRA + G A+SLV + + I Sbjct: 328 ATEVAARGLDIQGLDYVVNLDLPFFIEDYVHRVGRTGRAGSKGIAISLVSASDEPKVALI 387 Query: 361 EKLLKKEIPRIAIPGYEPDPS 381 EK + +I R+ I G+E S Sbjct: 388 EKAIGTKIKRVKIKGFEVTES 408 >UniRef50_A2U4F0 DEAD/DEAH box helicase n=4 Tax=Flavobacteriales RepID=A2U4F0_9FLAO Length = 411 Score = 358 bits (918), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 170/371 (45%), Positives = 251/371 (67%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F + L+ I +A+AE + +PT +Q++ IP VL+ ++++ +AQTGTGKTA F LP++ Sbjct: 1 MQFSDIPLNKSIQKAIAEARFHKPTLVQEKTIPLVLDKKNVIVAAQTGTGKTAAFALPII 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L +Q KG + ++AL++TPTRELA QI EN + YSKY N+RS VFGGVS+ PQ Sbjct: 61 NLLFDKQDAEKGEKKIKALVITPTRELAIQILENFKSYSKYSNLRSTAVFGGVSLEPQKE 120 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GVD+LVATPGRL+DL+ Q + L Q+EI VLDEAD MLDMGFI+DI+++ P K Sbjct: 121 ILAKGVDILVATPGRLIDLQMQGNIDLSQLEIFVLDEADLMLDMGFINDIKKIEKLCPRK 180 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 +Q LLFSAT + I L++ ++ N ++++ T + + Q ++++ KK K +L H++ Sbjct: 181 KQTLLFSATIPEKIDELSKSIVKNATKVDINPEETTAKNIGQLLYYLPKKNKTDLCLHLL 240 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++++F RTK + L + L K+G A+IHG+K+QG R +A+ DFKS +L+ Sbjct: 241 RNTINGKIIIFRRTKFAVDKLEQTLIKNGYNVASIHGDKTQGVRNKAIEDFKSKKASILI 300 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+DI + ++N+++PNVPE YVHRIGRTGRA +G A S DE+ + I Sbjct: 301 ATDVAARGIDITNVDAIINFDIPNVPEIYVHRIGRTGRAGKSGIAFSFCSPDENNYIASI 360 Query: 361 EKLLKKEIPRI 371 E L++K I I Sbjct: 361 ENLIEKSIKVI 371 >UniRef50_A1B2U6 DEAD/DEAH box helicase domain protein n=23 Tax=Rhodobacterales RepID=A1B2U6_PARDP Length = 479 Score = 357 bits (915), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 201/431 (46%), Positives = 270/431 (62%), Gaps = 29/431 (6%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F +G+ + + G P+PIQ+++IP ++ GRDL+ AQTGTGKTA F LP+L Sbjct: 68 AFTRMGIDARVAINLPGLGIETPSPIQEKSIPGIVAGRDLLGLAQTGTGKTAAFGLPMLT 127 Query: 62 HL--ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 L I R+P R RALIL PTRELA QI EN+ +Y+ IR V GG SIN Q+ Sbjct: 128 RLLNIGRKPEP---RTCRALILAPTRELATQIAENIDNYAIGTPIRQFRVVGGASINVQV 184 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 +L GVDVL+ATPGRL+DL + A+ L Q LVLDEAD+MLD+GFIH +RR+ LP Sbjct: 185 QRLERGVDVLIATPGRLIDLIERGAIDLSQTRYLVLDEADQMLDIGFIHALRRIAKMLPR 244 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ LLFSAT ++ LA+ L++PL + V A++++ Q VHFV++ K LL+ Sbjct: 245 ERQTLLFSATMPKLMEELADSYLNDPLRVAVNPPGQAAEKIDQGVHFVNQGDKATLLAEY 304 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + K + +VF RTKHG+ L + L+K G + AAIHGNKSQG R RALA F++G+ +VL Sbjct: 305 LSKHVDELAIVFGRTKHGSEKLCKLLDKWGFKVAAIHGNKSQGQRERALASFRAGETKVL 364 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLDI ++ HV NY+LPNVPE+YVHRIGRT RA G A++ E LR Sbjct: 365 VATDVAARGLDIPQVAHVYNYDLPNVPENYVHRIGRTARAGRDGRAIAFCSPTEIGELRA 424 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKS 419 IEK +K +IA+ G E EP + + + GG G+ A+ Sbjct: 425 IEKAMKA---KIAVVGGE-------EPFEAAKIRERGGPAGR--------------PAQG 460 Query: 420 ASAKPAEKPSR 430 A +PA +PSR Sbjct: 461 ARKRPARRPSR 471 >UniRef50_D2MPZ3 Putative ATP-dependent RNA helicase RhlE n=1 Tax=Bulleidia extructa W1219 RepID=D2MPZ3_9FIRM Length = 425 Score = 355 bits (911), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 167/369 (45%), Positives = 251/369 (68%), Gaps = 5/369 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F+ L +L ++A+ Y++P+PIQ++ IP +LEG DL+A AQTGTGKTA F LP+L Sbjct: 1 MTFNEFNLRKPLLDSLAKASYKKPSPIQEKGIPILLEGSDLIACAQTGTGKTATFALPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + H+ +RALILTPTRELA QI EN++ + +Y+++R+ V+GG PQ+ Sbjct: 61 NSLSKEKNHS-----IRALILTPTRELATQIFENIKMFGRYMHLRACCVYGGSPAAPQLK 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +R G D+L+ATPGRLLD + L +E LVLDEADRMLDMGFI D+R+++ ++P Sbjct: 116 AIRSGCDILIATPGRLLDYLAHGKISLRHIEFLVLDEADRMLDMGFIADVRKIVQQIPND 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 R LFSAT +I+ LA +L NP E+ + + + Q++ + +K K+++L +++ Sbjct: 176 RITALFSATMPKEIQELARDILKNPKEVRIEAEKFTASTIDQYLIYTEKSSKKKVLVNLL 235 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + ++ +VFTRTK GA+ L + L + I IHG+K+QG R AL F++ IR+L+ Sbjct: 236 NTESIKKTIVFTRTKIGADRLEKYLKEKEIACLVIHGDKTQGQRLNALQRFRTNQIRILI 295 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+DI+++ HV+N++LP E+YVHRIGRTGRA G ++SLVC +E LL +I Sbjct: 296 ATDVAARGIDIKDISHVINFDLPEDIENYVHRIGRTGRAKQEGVSISLVCKEELNLLANI 355 Query: 361 EKLLKKEIP 369 E ++ +IP Sbjct: 356 ESYIQFQIP 364 >UniRef50_C6ATS7 DEAD/DEAH box helicase domain protein n=15 Tax=Alphaproteobacteria RepID=C6ATS7_RHILS Length = 580 Score = 355 bits (911), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 188/370 (50%), Positives = 250/370 (67%), Gaps = 6/370 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+SLG+S I+ + + G PTPIQ+ +IP +LEGRDL+ AQTGTGKTA F LPL++ Sbjct: 24 NFESLGVSKPIIATLFQLGIETPTPIQEHSIPLLLEGRDLIGLAQTGTGKTAAFGLPLIE 83 Query: 62 HLIT--RQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 L+ R+P R R LIL PTREL QI E+++ + + ++R VV GGVSIN Q Sbjct: 84 KLLADERRPD---NRTTRTLILAPTRELVNQIAESLKKFIRKSSLRINVVVGGVSINKQQ 140 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 ++L G D+LVATPGRLLDL ++ A+ L V LVLDEAD+MLD+GF+HD+R++ +P Sbjct: 141 LQLEKGTDILVATPGRLLDLINRRAITLTAVRYLVLDEADQMLDLGFVHDLRKIAKMVPK 200 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFV-DKKRKRELLSH 238 KRQ +LFSAT I LA + L +P+++EV A+D+V Q+VHFV K K ELL Sbjct: 201 KRQTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAADKVEQYVHFVAGKNDKTELLRK 260 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 + + + +VF RTKHGA L + L G A+IHGNKSQG R RAL F+ G I+ Sbjct: 261 SLTENPDGRAMVFLRTKHGAEKLMKHLENIGYSVASIHGNKSQGQRERALKAFRDGSIKT 320 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 L+ATD+AARG+DI + HV NY+LP VP+ YVHRIGRT RA G A++ DE KLLR Sbjct: 321 LIATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRIGRTARAGRDGIAIAFCAPDEAKLLR 380 Query: 359 DIEKLLKKEI 368 DIE+L+ +I Sbjct: 381 DIERLMGIDI 390 >UniRef50_B1ZWV2 DEAD/DEAH box helicase domain protein n=9 Tax=Verrucomicrobia RepID=B1ZWV2_OPITP Length = 409 Score = 355 bits (910), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 180/382 (47%), Positives = 249/382 (65%), Gaps = 5/382 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F +L LS +LR V GY +PTPIQ +AIP VL G DL+ SAQTGTGKTA F LP+L Sbjct: 1 MPFKALQLSAPVLRGVVAAGYTDPTPIQLRAIPVVLGGGDLIGSAQTGTGKTAAFALPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L A R R L+L PTRELAAQ+ RD++++ ++R++ VFGGV Q Sbjct: 61 TRL-----GAHAARAPRVLVLEPTRELAAQVETAFRDFARFTDLRTVAVFGGVGYGLQRT 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L+ GVDV+VATPGRL+D H + L VEILVLDE DRMLDMGF+ ++ ++ + P + Sbjct: 116 ELKRGVDVIVATPGRLMDYLHDRTINLQGVEILVLDEVDRMLDMGFLPVVKDIIQRCPRQ 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ L FSAT +I+A+A L NP +EV + ++ V ++ V +K ELL ++ Sbjct: 176 RQTLFFSATVPPEIQAVASFALRNPTRVEVGVNRSVNESVKHALYPVAADQKFELLEALL 235 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + ++ VLVF+RTKHGA+ +A +L A +H N+SQ R ALA FKSG ++V Sbjct: 236 ARTDFDSVLVFSRTKHGADKIARKLKAANHSVAVLHANRSQNQRIEALAGFKSGKYEIMV 295 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ + HV+NY++P PEDYVHRIGRTGRA A G+A +LV + +RDI Sbjct: 296 ATDIAARGIDVAGVSHVINYDVPEKPEDYVHRIGRTGRAQAVGDAFTLVTPENAHDVRDI 355 Query: 361 EKLLKKEIPRIAIPGYEPDPSI 382 E+ + ++IP + + G+ P + Sbjct: 356 ERFIGQKIPELRLAGFSYRPFV 377 >UniRef50_Q0G0P8 Superfamily II DNA and RNA helicase n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G0P8_9RHIZ Length = 457 Score = 354 bits (909), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 183/364 (50%), Positives = 247/364 (67%), Gaps = 5/364 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD GL+ + RA+A PTPIQ++AIP L GRD++ AQTGTGKTA F LPLL Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64 Query: 62 HLITR--QPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 HL+T +P R +ALIL+PTRELA QI E++ D S+ I VVFGGVS+ PQ+ Sbjct: 65 HLMTVGGKPTT---RTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQI 121 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L GVD+LVATPGRLLDL Q A+ L + L+LDEADRMLDMGF+ D+ +++ K P Sbjct: 122 QALARGVDILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGKCPD 181 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ+++FSAT I+ L++K+L NP ++ V +++ Q V V ++ K+ L Sbjct: 182 DRQSMMFSATMPKPIEDLSKKILTNPQKVSVTPAVVTVEKIAQSVFSVPQRAKKHWLIDF 241 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + K + +++VFTRTKHGAN L L+K GI++ AIHGNKSQ AR +AL F+ G+I VL Sbjct: 242 VSKNDTGRIVVFTRTKHGANRLTSDLDKAGIQALAIHGNKSQTARQKALGAFQDGEIDVL 301 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDI ARG+ ++++ HVVN++LP PE YVHRIGRT RA +G+A++LV E L+ Sbjct: 302 VATDIVARGIHVDDISHVVNFDLPEEPESYVHRIGRTARAGRSGQAIALVDPSERAKLKQ 361 Query: 360 IEKL 363 I KL Sbjct: 362 IIKL 365 >UniRef50_B5EAF1 DEAD/DEAH box helicase domain protein n=3 Tax=Deltaproteobacteria RepID=B5EAF1_GEOBB Length = 471 Score = 352 bits (903), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 177/377 (46%), Positives = 250/377 (66%), Gaps = 6/377 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L P + + GY PTPIQ QAIP+V+ G+D++ AQTGTGKTA F LP+L Sbjct: 1 MDFKQFNLHPKVQAGIEAMGYVTPTPIQLQAIPSVISGQDVLGLAQTGTGKTAAFGLPML 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L+ + R VR L+L PTRELA QI + + K +RS+ V+GGV+IN Q+ Sbjct: 61 HRLVQEE-----RGHVRGLVLAPTRELAEQINDALNGMGKQTRLRSVTVYGGVNINTQIK 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL+ G +++VA PGRLLD Q + L +VEILVLDEAD+M DMGF+ D+R++L LP K Sbjct: 116 KLKEGAEIVVACPGRLLDHISQGTIDLSRVEILVLDEADQMFDMGFLPDVRKILRALPGK 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNL+FSAT DDI+ LA ++L NP+ ++V+R A+ V+ ++ V + K LL M+ Sbjct: 176 RQNLMFSATMPDDIRRLAHEILRNPVTVQVSRTAPAA-TVSHALYPVGQHLKTPLLFEML 234 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + VL+FT+TKH A + EQL K G ++ ++ GN SQ R AL F+ G +++V Sbjct: 235 KHTDTESVLIFTKTKHRAKRVGEQLEKAGYKATSLQGNLSQNRRQAALDGFRDGTFQIMV 294 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ + HV+NY++P+ PE Y HRIGRTGRAA TG+A ++V ++ +R I Sbjct: 295 ATDIAARGIDVSLISHVINYDIPDTPEAYTHRIGRTGRAAKTGDAFTMVTSEDDYTVRSI 354 Query: 361 EKLLKKEIPRIAIPGYE 377 EK+L +I R I G++ Sbjct: 355 EKVLGTKIERRRIEGFD 371 >UniRef50_C7N178 DNA/RNA helicase, superfamily II n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N178_SLAHD Length = 657 Score = 349 bits (895), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 188/382 (49%), Positives = 249/382 (65%), Gaps = 10/382 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD GLS L AV + GY EPTPIQQQAIP VLEGRDL+A+A+TGTGKTA F LP + Sbjct: 8 TFDESGLSATALAAVYDLGYEEPTPIQQQAIPVVLEGRDLIAAAKTGTGKTAAFALPTMD 67 Query: 62 HLITRQPHA-KGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L P+A KG PV +I+TPTRELA QI E +K N R + + GGVS PQ+ Sbjct: 68 KL----PYAGKGEGPV-MVIVTPTRELAMQISEVCETIAKRTNHRVVTLLGGVSYTPQIK 122 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KLR G D+++ATPGRLLDL Q+ LD V++LVLDEADRMLDMGF + ++ P++ Sbjct: 123 KLRSGCDIIIATPGRLLDLMRQHEADLDLVQVLVLDEADRMLDMGFWPQVSEIVDATPSE 182 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT + LL++P IE++ R +D V Q++ + ++ K LL+ I Sbjct: 183 RQTLLFSATIDRSQDKVMFSLLNHPEIIEISHRGDTADLVDQYIIWTGRREKPALLNAFI 242 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +V+VFT+TK GA++ +L K GI + AIH ++SQ R RAL F+ G V+V Sbjct: 243 REKGGFRVIVFTKTKGGADNCTRRLCKIGIGAEAIHADRSQAQRQRALERFREGKTHVIV 302 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+ ARG+D+ E+ +VVNY+LP +PEDYVHRIGRTGRA G A+S V D LLR I Sbjct: 303 ATDVLARGIDVPEVDYVVNYDLPMMPEDYVHRIGRTGRAGVAGYAVSFVTPDTKNLLRSI 362 Query: 361 EKLLKKEIPRIAIP----GYEP 378 +K + ++I + YEP Sbjct: 363 QKFIGEDIQVMEFKAGEDAYEP 384 >UniRef50_C8WFI7 DEAD/DEAH box helicase domain protein n=3 Tax=Zymomonas mobilis RepID=C8WFI7_ZYMMN Length = 506 Score = 348 bits (894), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 185/372 (49%), Positives = 239/372 (64%), Gaps = 5/372 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF LGLS ++L+AVAE GY EPTP+Q AIP+VL RDL+A AQTGTGKTA F LP++ Sbjct: 15 MSFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMI 74 Query: 61 QHLITRQPHAKGR-RPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 L H + R R R+LIL PTRELAAQ+ EN Y KY + ++ GGV + Q Sbjct: 75 DILA----HGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQ 130 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L GVDVL+ATPGRLLDL + + L E+LV+DEADRMLDMGFI DI + TKLP Sbjct: 131 AALEKGVDVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLDMGFIPDIETICTKLPT 190 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ LLFSAT IK LA++ L NP +IE++R TA+ + Q + V + K++ L M Sbjct: 191 SRQTLLFSATMPPAIKKLADRFLSNPKQIEISRPATANTLIDQRLIEVSPRSKKKKLCDM 250 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++F K LA L + G IHG+ SQ R L FK+G I VL Sbjct: 251 LRAEKDHTAIIFCNRKTTVRQLATTLEQQGFSVGQIHGDMSQPERGSELERFKNGQISVL 310 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VA+DIAARGLD++ + HV N+++P P+DY+HRIGRTGR A+GEAL+ V + + + Sbjct: 311 VASDIAARGLDVKGISHVFNFDVPTHPDDYIHRIGRTGRGGASGEALTFVTPADEEAITA 370 Query: 360 IEKLLKKEIPRI 371 IEKL+ EIPR+ Sbjct: 371 IEKLMGVEIPRL 382 >UniRef50_C7JBN9 DNA/RNA helicase n=19 Tax=cellular organisms RepID=C7JBN9_ACEP3 Length = 636 Score = 348 bits (894), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 185/375 (49%), Positives = 243/375 (64%), Gaps = 3/375 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F L LS ILRA+++ GY PTPIQ+QAIPA+L RD+M AQTGTGKTA FTLP+L Sbjct: 155 VTFADLELSEPILRAISDMGYTHPTPIQEQAIPAILMARDVMGVAQTGTGKTASFTLPML 214 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + I A+ R P R+LIL PTRELA Q+ EN +Y KYL + ++ GG S+ Q Sbjct: 215 E--ILSDSRARARMP-RSLILEPTRELALQVAENFVNYGKYLKLNHALLIGGESMADQKE 271 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GVDVL+ATPGRLLDL + + L+ ILV+DEADRMLDMGFI DI +++ LP Sbjct: 272 VLNRGVDVLIATPGRLLDLFERGGLMLNHTGILVIDEADRMLDMGFIPDIEKIVGLLPPN 331 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT + I+ LA+ LH+P EI VAR+++ + +T + VD+ KRE L ++ Sbjct: 332 RQTLLFSATMAPTIRKLADAFLHSPKEITVARQSSVATTITTGIVVVDEYSKRETLRQLL 391 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 Q +VF K + L + L K G +AA+HG+ Q R L FK+ +++VLV Sbjct: 392 KDPALQNAIVFCNRKRDVDILTKSLVKHGFSAAALHGDLPQSVRFSTLEKFKNDELKVLV 451 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 +D+AARG+DI L HV N++LP EDYVHRIGRTGRA G A S+ + L I Sbjct: 452 CSDVAARGIDIGGLSHVFNFDLPFHAEDYVHRIGRTGRAGREGHAYSIATPYDKALAEAI 511 Query: 361 EKLLKKEIPRIAIPG 375 EKL KEIPR+A+ G Sbjct: 512 EKLTGKEIPRMALDG 526 >UniRef50_D2L498 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L498_9DELT Length = 492 Score = 348 bits (893), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 182/381 (47%), Positives = 245/381 (64%), Gaps = 4/381 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSFDS L I + GY PTPIQ +AIP V EGRDLM AQTGTGKTA F LP++ Sbjct: 1 MSFDSFCLHATITENIKRLGYENPTPIQAEAIPHVTEGRDLMGLAQTGTGKTAAFLLPII 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L+T + +G VRALIL PTRELA QI D + +R+ V++GGV + PQ Sbjct: 61 HRLMTTKSEKRG---VRALILAPTRELAEQIYRAGLDLGRGTRLRAAVIYGGVGMFPQTR 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR GVD++VA PGRLLD +Q V+ D +E LVLDEAD M DMGF+ DI+R+L+ LP++ Sbjct: 118 ALRQGVDIIVACPGRLLDHMNQGNVRFDALETLVLDEADHMFDMGFLPDIKRILSALPSE 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT I LA + L +P+ + + S V ++ + +K LL H++ Sbjct: 178 RQTLLFSATMPPAISGLAHETLTDPVTVRIGHMAPLS-TVEHAIYPISHTQKAPLLLHLL 236 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + Q V+VFTRTKH A +LA QL + G ++ + GN SQ R A+ F+ G +VLV Sbjct: 237 EEAGKQSVIVFTRTKHRAKNLALQLCRSGHKATCLQGNLSQRQRQIAMDGFRRGSFQVLV 296 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ ++ HVVN+++P+ E Y HRIGRTGRA G+A + V ++ ++R I Sbjct: 297 ATDIAARGIDVSQVGHVVNFDIPDTAEAYTHRIGRTGRAEHEGQAHTFVTGEDMGMVRAI 356 Query: 361 EKLLKKEIPRIAIPGYEPDPS 381 E +KK +PR + G+EPDPS Sbjct: 357 ESHMKKPLPRREVEGFEPDPS 377 >UniRef50_UPI0000E87E35 putative ATP-dependent RNA helicase protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87E35 Length = 427 Score = 348 bits (892), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 167/378 (44%), Positives = 249/378 (65%), Gaps = 4/378 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF + L IL+A+ E GY +PTPIQ ++IP ++ + ++ASAQTGTGKTA F LP+L Sbjct: 1 MSFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + ++GR P R LI++PTRELA QI ++++ YS+YL I S+ + GG+S Q Sbjct: 61 DKLTKNR--SEGRGP-RVLIVSPTRELATQITDSIKKYSRYLRINSITITGGISYGLQNR 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +D+LVATPGRLLDL Q + +E+++LDEADRMLDMGF+ DIR++ K Sbjct: 118 MFSKPIDILVATPGRLLDLYQQKKINFKGLEVMILDEADRMLDMGFVPDIRKIYNATSKK 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK-RKRELLSHM 239 +Q L+FSATF I+ +A++ L NP+ I + + + Q ++F D + K+++L H Sbjct: 178 QQMLMFSATFDPPIQKIAQEFLTNPVTISIKPDVSGHKNIKQLIYFADNQSHKQQMLDHF 237 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I Q ++FT TK A+ L++QL I+++A+HG+ SQG+RT+ + FK + ++L Sbjct: 238 IKNDEVTQAIIFTATKRMADQLSDQLYHSDIKTSALHGDMSQGSRTKTINRFKRNETKIL 297 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+A+RG+D++ + HV NY++P EDY+HRIGRTGRA G A+SLV + + LR Sbjct: 298 VATDLASRGIDVKNISHVFNYDMPRFAEDYIHRIGRTGRANNKGIAISLVSPTDREFLRK 357 Query: 360 IEKLLKKEIPRIAIPGYE 377 IE+ +I +IPG E Sbjct: 358 IERFTNLKIEIASIPGME 375 >UniRef50_B2UL73 DEAD/DEAH box helicase domain protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UL73_AKKM8 Length = 423 Score = 346 bits (888), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 182/370 (49%), Positives = 252/370 (68%), Gaps = 3/370 (0%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS ILR + Y+ PTPIQ IP +L+ +DLM AQTGTGKTA F LPL+Q Sbjct: 5 TFRELGLSAPILRQLENLEYKTPTPIQAACIPLLLQNKDLMGLAQTGTGKTAAFALPLIQ 64 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L R GRR VRALIL+PTRELAAQI EN+R Y++ L++ + V+FGGV Q + Sbjct: 65 QLSERSGKPPGRR-VRALILSPTRELAAQIHENIRAYARGLHLSTAVIFGGVGYASQFKE 123 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GG+D+LVATPGRL+D + V LD VE L+LDEAD MLDMGF ++++++K+P KR Sbjct: 124 LAGGLDILVATPGRLIDHLERRTVSLDGVETLILDEADHMLDMGFAPALKKIVSKIPRKR 183 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 +FSAT D+I+ LA+ LL P + V+ ++ +D+V Q + V + ++ LL+ + Sbjct: 184 HTQMFSATMPDNIRQLAQTLLQKPETVRVSPPSSTADRVEQFLCMVGSQSEKRLLTLELL 243 Query: 242 KGNWQ--QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 K + L+FTRT+HGA+ LA L+ ++AIHG+KSQG R R L +F+SG VL Sbjct: 244 KQQELPGRTLIFTRTRHGADRLASFLSGKDYPASAIHGDKSQGRRERMLREFRSGKTPVL 303 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARG+D++++ V+NY+LP PE YVHRIGRT RA A G+A++L +E + R+ Sbjct: 304 VATDIAARGIDVKDVRLVINYDLPEEPEVYVHRIGRTARAGAAGQAIALCSPEEIRKARN 363 Query: 360 IEKLLKKEIP 369 + KLL + +P Sbjct: 364 VHKLLGRLLP 373 >UniRef50_D0WJ40 Putative ATP-dependent RNA helicase RhlE n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WJ40_9ACTN Length = 721 Score = 343 bits (880), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 180/367 (49%), Positives = 244/367 (66%), Gaps = 4/367 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ LGLS L AV + GY EPTP+Q++AIP VLEGRDL+A+A+TGTGKTA F+LP L Sbjct: 25 TFNDLGLSEKALSAVVDLGYSEPTPVQEKAIPVVLEGRDLIAAAKTGTGKTAAFSLPTLD 84 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L R A P+ +I+TPTRELA QI + ++ N ++V+ GGV PQ+ K Sbjct: 85 QLRYR---ADDEGPL-MVIVTPTRELAQQIADTCAPIARRTNHSTVVLLGGVGYGPQIKK 140 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR G D+++ATPGRLLDL Q A L VE LVLDEADRMLDMGF + ++ +PA+R Sbjct: 141 LRAGADIIIATPGRLLDLMRQGAADLGNVEKLVLDEADRMLDMGFWPQVSEIVDAIPAER 200 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT + LL +P IE+A R +D + Q+V D++ K LL+ + Sbjct: 201 QTLLFSATIDRSQDKVMFSLLKDPEIIEIAHRGDVADLIDQYVIKTDRRLKPALLNSFVR 260 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +V+VFTRTK GA++ ++L K GI + AIH ++SQ R RAL +F+ G VLVA Sbjct: 261 ERGGFRVIVFTRTKGGADNCTKRLRKIGIATEAIHADRSQAQRARALDNFREGKTHVLVA 320 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+ +RG+D+ E+ +V+NY+LP +PEDYVHRIGRTGRA A G A+S V D LL+ I+ Sbjct: 321 TDVLSRGIDVPEVDYVINYDLPMMPEDYVHRIGRTGRAGARGYAVSFVTPDTRNLLKSIQ 380 Query: 362 KLLKKEI 368 K + + I Sbjct: 381 KFIDQTI 387 >UniRef50_C7MN05 DNA/RNA helicase, superfamily II n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MN05_CRYCD Length = 551 Score = 343 bits (879), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 182/384 (47%), Positives = 251/384 (65%), Gaps = 6/384 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS L AV GY +PTP+Q+QAIPAVL GRD++A+A+TGTGKTA F+LP + Sbjct: 4 TFHDLGLSEKALAAVDLLGYTDPTPVQEQAIPAVLAGRDVIAAAKTGTGKTAAFSLPTMD 63 Query: 62 HLITRQPHAK-GRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L HA+ G+ P+ LI+TPTRELA QI R +K R V GGVS NPQ+ Sbjct: 64 RL----GHARHGQGPL-LLIVTPTRELALQIESVCRTIAKRSGHRVTCVVGGVSYNPQID 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR G DVL+ATPGRL+DL +Q+A L+QVE LVLDEADRMLDMGF+ D+RR++ P + Sbjct: 119 SLRRGTDVLIATPGRLIDLMNQDAAHLNQVETLVLDEADRMLDMGFLPDMRRIVAACPTQ 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT I+ LL+NP+ +E+A R +D + Q+ VD + K +LL ++ Sbjct: 179 RQTLLFSATIDSAIEDNMAHLLNNPVFVEIAHRGETADTIEQYRIPVDHRHKNDLLIALL 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +++VF RT+H + +L K G IH ++SQ R RA+ ++G +LV Sbjct: 239 NERGGTRIIVFARTRHRVDTCVRKLRKAGFAVEPIHSDRSQNQRKRAIEALEAGKCDILV 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+ ARG+DI + +VVN ++P+ EDYVHRIGRTGRA G A+S V + +LRDI Sbjct: 299 ATDVLARGIDIPNVNYVVNLDMPDQVEDYVHRIGRTGRAGEAGCAISFVTPENKAILRDI 358 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKA 384 +KL+ K+IP +++ ++ S A Sbjct: 359 QKLIGKDIPEMSVESFDSSASDNA 382 >UniRef50_Q2RQT0 DEAD/DEAH box helicase n=59 Tax=root RepID=Q2RQT0_RHORT Length = 799 Score = 342 bits (877), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 192/448 (42%), Positives = 260/448 (58%), Gaps = 28/448 (6%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F LGLSP+ LRA+ E GY PTPIQ QAIP V GRD++ AQTGTGKTA FTLP++ Sbjct: 1 MTFADLGLSPETLRAIEEVGYTTPTPIQVQAIPYVQMGRDVLGIAQTGTGKTASFTLPMI 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + + AK R P R+LIL PTRELA Q+ EN Y KY + ++ GG S+N Q Sbjct: 61 DILASGK--AKARMP-RSLILAPTRELATQVSENFTLYGKYQKLSMALLIGGESMNEQQK 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GVDVL+ATPGRL+DL + ++ L V++LV+DEADRMLDMGFI D+ R++ LP Sbjct: 118 VLDRGVDVLIATPGRLIDLFERGSILLRDVKVLVIDEADRMLDMGFIPDVERIVALLPKI 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ L FSAT +I+ LA+ L NP E+ + ++ V Q + V KRE L ++ Sbjct: 178 RQTLFFSATMDKEIRRLADAFLMNPKEVRIEPTQKVAETVEQALIMVKASEKREALRQLL 237 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +F K + L + L+ G A+HG+ Q RT L FK +++++V Sbjct: 238 RRETVTNAFIFCNRKRDVDVLYKSLSGHGFDILALHGDMPQYVRTERLEKFKRAEVQLMV 297 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 +D+AARG+D+ E+ HV N+++P PEDY+HRIGRTGRA G A +L ++ K LR I Sbjct: 298 CSDVAARGIDVTEVSHVFNFDVPTHPEDYIHRIGRTGRAGRLGRAYTLATPEDAKYLRAI 357 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPI-----------QNGRQQRGGGGRGQGGGRGQQQ 409 E LL K IP PDP ++ + + R +RGG GR + G R Sbjct: 358 ENLLGKTIP--------PDPQLELSDVAVEDVALAVAEDDRRPKRGGKGRPERGAR---- 405 Query: 410 PRRGEGGAKSASAKPAEKPSRRLGDAKP 437 R G G A + +P P R D P Sbjct: 406 -RSGRGSADAERPRPL-APERAANDQAP 431 >UniRef50_A5UZK3 DEAD/DEAH box helicase domain protein n=8 Tax=Bacteria RepID=A5UZK3_ROSS1 Length = 467 Score = 340 bits (873), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 178/377 (47%), Positives = 248/377 (65%), Gaps = 6/377 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSFDS P I + + GY PTPIQ+Q IP L+GRD++ AQTGTGKTA F LP+L Sbjct: 1 MSFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L+ R P +GR VRA+I+TPTRELA QI + KY +RS+ ++GGV Q+ Sbjct: 61 QRLM-RGP--RGR--VRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQ 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +LR GV++ V PGRLLD + + L+ +++L+LDEAD+M DMGF+ D+RR+L PA+ Sbjct: 116 RLRRGVEIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDVRRILRLAPAQ 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT D I+ALA + L P I++ R S VT ++ V + K LL ++ Sbjct: 176 RQTMLFSATMPDAIRALAREALREPQTIQIGRSAPVS-TVTHAIYPVAEHLKTALLIELL 234 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + VL+FTRTKH A HL++ L + G R+ A+ GN SQ R AL F+SG ++LV Sbjct: 235 RHTDTGSVLIFTRTKHRAQHLSDTLARMGYRATALQGNMSQNRRQAALDGFRSGRYQILV 294 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ + HV+NY++P E Y HRIGRTGRAA TG+A +LV + ++R I Sbjct: 295 ATDIAARGIDVAHISHVINYDMPQTAEAYTHRIGRTGRAARTGDAFTLVTRSDTGMVRAI 354 Query: 361 EKLLKKEIPRIAIPGYE 377 E+L+ + + R +PG++ Sbjct: 355 ERLIGEPLKRETVPGFD 371 >UniRef50_A4EAF2 Putative uncharacterized protein n=4 Tax=Collinsella RepID=A4EAF2_9ACTN Length = 749 Score = 338 bits (868), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 177/384 (46%), Positives = 242/384 (63%), Gaps = 20/384 (5%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD LGLS ++LRA+ GY PTP+Q +IP VLEGRDL+A+AQTGTGKTA F LP + Sbjct: 47 AFDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEGRDLLAAAQTGTGKTAAFLLPTMN 106 Query: 62 HL-------------------ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL 102 +L ++P GR PV L++TPTRELA QI E + Sbjct: 107 NLEHIAPPKPVRERGGRNRRRGAKKPEGNGRGPV-MLVITPTRELAQQIDEVAGKIADVT 165 Query: 103 NIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRML 162 ++ V GGVS PQ L+ G D+LVATPGRL+DL Q A LD+V++LVLDEADRML Sbjct: 166 GHVAVTVVGGVSYKPQTAALKYGCDILVATPGRLVDLIEQGACHLDEVKVLVLDEADRML 225 Query: 163 DMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQ 222 DMGF+ +RR++ + PA+RQ LLFSAT ++ L+ +P +E+A + +D V Q Sbjct: 226 DMGFLPAVRRIVRETPAERQTLLFSATLDEEAVGEITDLVSDPARVEIAPATSTADTVDQ 285 Query: 223 HVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQG 282 V V + K LL + K ++ +VF RTKH A+ +L + GI++AAIHGN+SQ Sbjct: 286 FVFPVSIEAKNNLLPEFLKKEGPERTIVFMRTKHRADSCCRRLERKGIKAAAIHGNRSQA 345 Query: 283 ARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAAT 342 R RAL+ F+ G + VLVATD+ ARG+DI ++ +VVN+++P P DY+HRIGRTGRA Sbjct: 346 QRERALSAFRDGTVDVLVATDVLARGIDISDVRYVVNFDVPAEPTDYIHRIGRTGRAGEL 405 Query: 343 GEALSLVCVDEHKLLRDIEKLLKK 366 G A++ V + +IEKL+ K Sbjct: 406 GWAITFVTEQDVDEFYEIEKLMDK 429 >UniRef50_C6Q9Z2 DEAD/DEAH box helicase domain protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6Q9Z2_9RHIZ Length = 657 Score = 338 bits (867), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 181/379 (47%), Positives = 246/379 (64%), Gaps = 1/379 (0%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F++ G + + RA+ + GY PTPIQ QA+P LEGRDL+ A+TG+GKTA F LPLLQ Sbjct: 27 NFEAFGFAEPLSRALTQCGYVTPTPIQVQALPPQLEGRDLLGMAETGSGKTATFVLPLLQ 86 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 I Q + V AL+L PTRELA QI + V ++ + IR VV GGVS PQ+ Sbjct: 87 K-IASQNSEPAPKQVLALVLAPTRELAIQIDQEVASLARNMRIRRAVVLGGVSKGPQINA 145 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV VLVATPGRLLDL + L +VE LVLDEADRM DMGFI DI++++ LP R Sbjct: 146 LKRGVHVLVATPGRLLDLINMRTCDLSRVETLVLDEADRMFDMGFIRDIKKIVAMLPEAR 205 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 + LFSAT +IK A +L P ++++ ++ D++ Q V V K+ L ++ Sbjct: 206 RTALFSATMPVEIKKFAYDILKEPYRVDLSSKSVVVDRIDQKVMIVRTTEKQSRLHTILA 265 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 ++V+VFTRTK GA+ +AE+L GI ++A HGNK+Q AR RAL DF G IRVLVA Sbjct: 266 DEACKRVIVFTRTKRGADRVAERLGMAGISASAFHGNKAQNARQRALNDFMMGHIRVLVA 325 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TDIAARG+D+ + HVVN+++P PE YVHR+GRT R +G A+SL E + + IE Sbjct: 326 TDIAARGIDVSNITHVVNFDMPLDPETYVHRVGRTARKGNSGIAISLCDPGERQEITAIE 385 Query: 362 KLLKKEIPRIAIPGYEPDP 380 +++K+++ IA G E P Sbjct: 386 RMMKQKLEVIADVGGEALP 404 >UniRef50_B5ZGC1 DEAD/DEAH box helicase domain protein n=3 Tax=Acetobacteraceae RepID=B5ZGC1_GLUDA Length = 427 Score = 338 bits (866), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 178/362 (49%), Positives = 236/362 (65%), Gaps = 1/362 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F L L+P +LRA+AE+GY PTPIQ Q+IP +LEGRDL+ AQTGTGKTA F LPLL Sbjct: 3 MTFADLSLAPTLLRALAEEGYASPTPIQAQSIPMLLEGRDLLGMAQTGTGKTAAFALPLL 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H + P + R L+L PTREL +QI + + ++ +FGGVS Q+ Sbjct: 63 -HRLAMAPRPAPKGGARVLVLAPTRELVSQIADGFESFGRHQPPSVTTIFGGVSQVHQVN 121 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GVD++VA PGRLLDL Q L Q+E LVLDEAD+MLDMGF I R++ LP Sbjct: 122 ALKAGVDIIVAAPGRLLDLIDQGLCDLSQLEALVLDEADQMLDMGFARPIERIVATLPKD 181 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 R +LFSAT I LAE LL +P ++E+A +T D++ Q V FVD K+ L M+ Sbjct: 182 RHTVLFSATMPKSIATLAESLLRDPAKVEIAPPSTTVDRIEQSVMFVDAADKKAALLAML 241 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 Q +VFT K+ AN + + + GI + A+HGNKSQG R RAL F+SG +VLV Sbjct: 242 RTPGIGQAVVFTLQKNIANEVCAFITEAGITAEALHGNKSQGQRERALDAFRSGTAQVLV 301 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D++ + HV N++LP++PE YVHRIGRTGRA G A++L ++ LRD+ Sbjct: 302 ATDIAARGIDVDTVTHVFNHDLPSLPESYVHRIGRTGRAGRNGFAITLCDAEQRAWLRDV 361 Query: 361 EK 362 E+ Sbjct: 362 ER 363 >UniRef50_A1TMG8 DEAD/DEAH box helicase domain protein n=4 Tax=cellular organisms RepID=A1TMG8_ACIAC Length = 446 Score = 337 bits (865), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 186/357 (52%), Positives = 241/357 (67%), Gaps = 7/357 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F +LGLSP ++ A G+ PTPIQ QAIPAVL+G D++ AQTG+GKTA F LPLL Sbjct: 1 MPFAALGLSPALVHAAGALGFDTPTPIQAQAIPAVLDGGDVLGRAQTGSGKTAAFGLPLL 60 Query: 61 QHLITRQPHAKGRRPVR---ALILTPTRELAAQIGENVRDYSKYL---NIRSLVVFGGVS 114 Q L+ + A R R AL+L PTRELAAQ+GE +RD + +L ++ + GGVS Sbjct: 61 QRLLPQAQQAGARPGPRRPGALVLVPTRELAAQVGEVLRDLAGHLPGPRLKIAIACGGVS 120 Query: 115 INPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVL 174 INPQ+M LRGG D +VATPGRLLDL NA+ L QV LVLDEADR+LD+GF +++RVL Sbjct: 121 INPQLMALRGGADAVVATPGRLLDLVEHNALSLSQVRALVLDEADRLLDLGFAEELQRVL 180 Query: 175 TKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRE 234 LPA+RQNLLFSATF + LAE LL +PL IE+A + + Q V+ R+ + Sbjct: 181 ALLPAQRQNLLFSATFEPGVARLAEGLLRDPLRIEIAGAPGTAPDIAQRAIAVEAPRRTQ 240 Query: 235 LLSHMIGK-GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKS 293 LL ++ + W +VLVF T++ A H+AE+L + GI ++ HG SQG R + L +F+ Sbjct: 241 LLKQLLTQEPGWTRVLVFVATQYAAEHVAEKLYQSGIYASPFHGGLSQGTRRQVLQEFRD 300 Query: 294 GDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC 350 +VLV TD+AARG+DI LP VVNY+LP DYVHRIGRTGRA A+G A+S V Sbjct: 301 ERWQVLVTTDLAARGIDIAGLPAVVNYDLPRAAADYVHRIGRTGRAGASGVAVSFVT 357 >UniRef50_B5JNP6 DEAD/DEAH box helicase domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNP6_9BACT Length = 436 Score = 337 bits (864), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 189/430 (43%), Positives = 262/430 (60%), Gaps = 16/430 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF SL LS +LR++ GY E TPIQ AIP VL+G DL+A+AQTG+GKTA F+LP++ Sbjct: 1 MSFASLSLSDFLLRSLETLGYEEATPIQAAAIPVVLKGSDLLAAAQTGSGKTAAFSLPII 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL--NIRSLVVFGGVSINPQ 118 + L + +P R L+L PTRELA Q+G + Y++ R LV FGGV + Q Sbjct: 61 ERLAGMEEQKA--KP-RFLVLVPTRELAVQVGAAIERYAEGAPRKARVLVAFGGVGYDAQ 117 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 M GV+V+VATPGRL+DL + +V LD+VE+LVLDEADR+L +GF ++ +L LP Sbjct: 118 MKAAYAGVEVVVATPGRLIDLAERRSVVLDEVEMLVLDEADRLLALGFAEELNTILEMLP 177 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQNLLFSATF ++ +LA LL +P++IE+ + + + Q VD + LL H Sbjct: 178 EGRQNLLFSATFPQNVVSLANALLKDPVKIELEAASRPVESIAQRAIEVDGNSRTGLLRH 237 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ W++VLVF +K A ++ +L K GI++ A+HGN SQ R R+L FK +RV Sbjct: 238 LLETEGWERVLVFVGSKRRAENVTVKLQKHGIKAVALHGNMSQDKRARSLERFKQSKVRV 297 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 L+ATD+AARG+DI LP VVNY+LP DYVHRIGRTGRA +G A++ + D+ R Sbjct: 298 LMATDVAARGIDIAGLPCVVNYDLPRSAADYVHRIGRTGRAGESGLAVNFITDDKDAHFR 357 Query: 359 DIEKLLKKEIPRIAIPGYEP------DPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRR 412 IEK + R + G+ P DP+ P++ R + R G+ R Sbjct: 358 LIEKKNGLRLERERLEGFVPENWNPEDPAKGKAPVKGKRPSKKDKLRKAAAGKA-----R 412 Query: 413 GEGGAKSASA 422 G GG K S+ Sbjct: 413 GSGGNKDVSS 422 >UniRef50_Q0BSI7 ATP-dependent RNA helicase n=54 Tax=Alphaproteobacteria RepID=Q0BSI7_GRABC Length = 763 Score = 336 bits (862), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 203/473 (42%), Positives = 269/473 (56%), Gaps = 42/473 (8%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LGLS + RA+ E GY PTPIQ QAIP VL GRD++ AQTGTGKTA FTLP++ Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDI 284 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 L R+ A+ R P R+LIL PTRELA Q+ EN Y +YL + ++ GG S+N Q L Sbjct: 285 LSDRR--ARARMP-RSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMNDQRDVL 341 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 GVDVL+ATPGRL+DL + + L ILV+DEADRMLDMGFI D+ R+++ LP RQ Sbjct: 342 SKGVDVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLDMGFIPDVERIVSLLPHNRQ 401 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 L FSAT + +I+ LA+ L NP EI VA+ + + +T + V + KR+ L H++ + Sbjct: 402 TLFFSATMAPEIRRLADAFLQNPKEITVAKPASVATTITSGLALVGEMDKRKALRHLLRQ 461 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 Q L+F K + L + L K G + +HG+ +Q R L FK+G +++LV + Sbjct: 462 EKVQNALIFCNRKRDVDILTKSLVKHGFAAGPLHGDLAQSLRFSTLEKFKAGSLQLLVCS 521 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARG+DI L HV N+++P EDYVHRIGRTGRA G A +L D+ + IEK Sbjct: 522 DVAARGIDIGGLSHVFNFDVPIHAEDYVHRIGRTGRAGREGAAFTLASPDDKFAVDAIEK 581 Query: 363 LLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGR----------GQGGGRGQQQPRR 412 L+ IPRI I G E +AE + RG G R + G RGQ R+ Sbjct: 582 LINAPIPRIEIEGLE-----RAE--WSEEPNRGRGRRHKNGKGGKGNNRYGSRGQDNARK 634 Query: 413 G----EGGAKS------------ASAKPAEKPSRRLGDAKPAGEQQRRRRPRK 449 E AKS A+ +PA P A+P Q R R R Sbjct: 635 DRAFTEADAKSQADITPDPVAEVATTQPAPAP------AQPTQSQDRHHRSRN 681 >UniRef50_Q480Z7 ATP-dependent RNA helicase, DEAD box family n=2 Tax=Alteromonadales RepID=Q480Z7_COLP3 Length = 399 Score = 336 bits (861), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 163/370 (44%), Positives = 243/370 (65%), Gaps = 1/370 (0%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F + L I+ V +GY++PTPIQ++ IPA++ G DL+ AQTGTGKTA F+LP++ Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + K + R+LILTPTRELA+QI +N+ DYS L +++ VV+GGV Q+ + Sbjct: 64 FGRNKIDIKAKS-TRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSI 122 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 G+D+LVATPGRLLDL + +E+ VLDEAD MLDMGF D++ +++KLP RQ Sbjct: 123 ELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQ 182 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 LLFSAT +I+ LAE +L +P +I++ D V Q V+ +DK K LL +++ K Sbjct: 183 TLLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKSNKVPLLFNILTK 242 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 ++++VL+F +TK+GA+ + + L K I +A++H K+Q R AL +FK +RVLVAT Sbjct: 243 ADYEKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLRVLVAT 302 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARG+D++ + V+NY LP P +Y+HRIGRT RA +G A+S ++ + L +IE Sbjct: 303 DVAARGIDVDNITLVINYNLPEDPRNYIHRIGRTARAGKSGMAISFAVENDIRQLTNIEN 362 Query: 363 LLKKEIPRIA 372 + + IP + Sbjct: 363 SIGQVIPVVT 372 >UniRef50_C8WL27 DEAD/DEAH box helicase domain protein n=3 Tax=Eggerthella lenta DSM 2243 RepID=C8WL27_EGGLE Length = 508 Score = 333 bits (853), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 176/382 (46%), Positives = 241/382 (63%), Gaps = 5/382 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS L AV GY PTP+Q QAIP VLEGRDL+A+A TGTGKTA F LP+L Sbjct: 3 NFADLGLSEAALAAVERLGYENPTPVQLQAIPLVLEGRDLIAAASTGTGKTAAFLLPILS 62 Query: 62 HLITRQPHAK-GRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L P K G+R R L+++PTRELA QI + ++ VFGG PQ+ Sbjct: 63 TL----PRGKRGKRAPRVLVVSPTRELAQQISQTCMQITRKTGHYVTTVFGGTPYGPQIN 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 ++R G DVL+ATPGRL DL ++ V L ++ LVLDEADRMLDMGF+ + ++ PA Sbjct: 119 EIRRGTDVLIATPGRLNDLMNKGVVDLGGIKSLVLDEADRMLDMGFLPAVTTIVDATPAD 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT I+ LL++P +E+AR + V Q + + +K ELL ++ Sbjct: 179 RQTLLFSATIDHSIQKNLGSLLNDPAVVEIARNGETAQTVEQFMMPIANFKKPELLQALL 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +V+VF RTK+ AE L G R+ +IH +KSQG R RAL +F+ G +LV Sbjct: 239 EEKGSDRVIVFARTKNRTEDCAEALCDAGYRAESIHSDKSQGQRKRALDNFRRGRTSILV 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+ ARG+D+ ++ HV+N++LP++PEDYVHRIGRTGRA G A+S V + + + DI Sbjct: 299 ATDVLARGIDVPDVDHVINFDLPDMPEDYVHRIGRTGRAGEQGFAVSFVTRESRRTMSDI 358 Query: 361 EKLLKKEIPRIAIPGYEPDPSI 382 EKL+ K +P + + YE D ++ Sbjct: 359 EKLIGKNVPLMELETYELDMTV 380 >UniRef50_A3EUK2 Putative ATP-dependent helicase n=2 Tax=Leptospirillum sp. Group II RepID=A3EUK2_9BACT Length = 444 Score = 330 bits (845), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 180/375 (48%), Positives = 246/375 (65%), Gaps = 12/375 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F++LGLSP+ILRA+ + G+ PTPIQ+Q+IP V++GRDL+ AQTGTGKT GF LP+L Sbjct: 1 MTFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVL 60 Query: 61 QHLITRQPHAKGRRP---VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINP 117 + A+GRR RAL+L+PTRELA QI + +DY+KYL+ ++++ GGV Sbjct: 61 HKI------AEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIR 114 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 Q L+ D++VATPGRLLD +N + L ++++DEADRMLDMGF+ DI ++ +L Sbjct: 115 QERNLKRNWDIVVATPGRLLDHVRRNNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQL 174 Query: 178 PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELL 236 P RQ+LLFSAT I+ LA ++ + + V SD + Q V +K LL Sbjct: 175 PKGRQSLLFSATCPPRIQELAATFQNDAVIVRVEPERKGSDHIHQEWITVSHGSQKLGLL 234 Query: 237 SHMI--GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSG 294 ++ GK QV++FTRTK A L+ LN G S A+HG+KSQ R R L+ F+ G Sbjct: 235 KKVLDEGKSETGQVIIFTRTKRSAEDLSIALNDAGYPSDALHGDKSQPVRNRVLSRFRRG 294 Query: 295 DIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEH 354 D++VLVATD+AARGLDI+ + HV+NY+LP EDYVHRIGRTGRA TG ALS + Sbjct: 295 DLKVLVATDVAARGLDIDGITHVINYDLPQTAEDYVHRIGRTGRAGRTGRALSFFHPADR 354 Query: 355 KLLRDIEKLLKKEIP 369 ++R IE + K IP Sbjct: 355 DIVRSIETMAGKPIP 369 >UniRef50_B6BTD3 Dead/deah box helicase domain protein n=1 Tax=beta proteobacterium KB13 RepID=B6BTD3_9PROT Length = 444 Score = 328 bits (840), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 175/436 (40%), Positives = 267/436 (61%), Gaps = 6/436 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF + G P I +A++ Y PTPIQ+Q IP VL G+D++ASAQTGTGKTA F LPLL Sbjct: 1 MSFSNFGFIPPIGKAISRINYSTPTPIQEQCIPVVLSGKDVLASAQTGTGKTAAFCLPLL 60 Query: 61 QHLITRQPHAKGRRPVR--ALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 +L+ ++P K +R + LIL+PTRELA QI + ++ +S +++ + V GGVS Q Sbjct: 61 -NLVEKKPKHKHKRNISPDVLILSPTRELATQIEQELKRFSHFMDTNIVSVVGGVSYKLQ 119 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ V+ LVATPGRL+DL Q + L ++ LV+DEADRMLDMGFI DI+++ Sbjct: 120 NKLLKSNVNFLVATPGRLMDLVKQRKINLKHIDALVIDEADRMLDMGFIPDIKKIFESTS 179 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFV-DKKRKRELLS 237 +Q L+F+AT + I+ +A++ L +P I V + N ++ + Q + V D +K+ +L Sbjct: 180 QDQQVLMFTATLNKQIEKIAQQFLKDPQRIAVEQENKSNKNIQQIAYPVADYNQKKLVLV 239 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++ + + Q ++FT TK A+ L+++L RS +HG+ SQ RTR + FK+ +I+ Sbjct: 240 DVLNEADLNQAIIFTATKREADRLSDELYLMNHRSKTLHGDMSQRERTRTINRFKNNEIQ 299 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVATD+AARG+D++++ HV+N++LP EDY+HRIGRTGRA G+A+SLV E +L Sbjct: 300 ILVATDVAARGIDVDDITHVINFDLPRQVEDYIHRIGRTGRAERKGKAISLVIDKEKFML 359 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSI--KAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG 415 + IEK +I I D S+ K + +++R G R + R+ G Sbjct: 360 QKIEKYANIKIEVIKSTHSTSDLSLVYKKKESGFKKKRRSSGSRKKNDKFTSSSKRKKHG 419 Query: 416 GAKSASAKPAEKPSRR 431 AK +P ++ Sbjct: 420 FKADVKAKSRRRPVKK 435 >UniRef50_Q01PH0 DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01PH0_SOLUE Length = 422 Score = 327 bits (839), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 177/385 (45%), Positives = 246/385 (63%), Gaps = 10/385 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L LS + +A+ + EPTPIQ AI L G+D++A+AQTGTGKT F LP +Q Sbjct: 3 NFSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQ 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L++ +P G VRALILTPTRELA QI E + ++ IR+ V GG++ Q+ Sbjct: 63 -LLSTEPRQPG---VRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRD 118 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 +RGG +++VATPGRL D + + L V +L+LDE+DRMLDMGF+ I+R++ +PA+R Sbjct: 119 IRGGANIVVATPGRLYDFMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAER 178 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT +K L E + N + IE+ + S+QV H++ VD+ RK LL M+ Sbjct: 179 QTLLFSATLESSVKQLVETHVRNAVRIELGSISKPSEQVDLHLYEVDQDRKFGLLEMML- 237 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + LVF RTKHGA+ LA++L + G +SAAIHG++SQ R +AL F+ G RVLVA Sbjct: 238 REEQGSFLVFARTKHGADKLAKKLAQSGFKSAAIHGDRSQNQRIQALKGFQEGYYRVLVA 297 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARG+ +E + HVVN++LP VPED++HR+GRTGRA A G A + E + IE Sbjct: 298 TDVAARGIHVEGISHVVNFDLPQVPEDFIHRVGRTGRAGAKGTASTFATRSERSEIGRIE 357 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEP 386 + L ++ R E SI A P Sbjct: 358 RTLSVKLKR-----REVSASIVAAP 377 >UniRef50_D2QS74 DEAD/DEAH box helicase domain protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QS74_9SPHI Length = 475 Score = 327 bits (839), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 166/378 (43%), Positives = 249/378 (65%), Gaps = 9/378 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF+ L+ +L AVAE GY PTPIQQ+ IP L D++ AQTGTGKTA + LP+L Sbjct: 5 SFEQFELNRQLLNAVAELGYTVPTPIQQKTIPLSLGNHDVLGIAQTGTGKTAAYLLPILM 64 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + +A+G+ P RALIL PTREL QI + V + KY ++R L ++GG+ Q+ Sbjct: 65 KV----KYAQGKNP-RALILAPTRELVMQINQAVSELGKYTDLRHLALYGGLGPKTQIET 119 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GVD++VATPGR +DL + ++ +VLDEAD+M+DMGF+ IR +L +P KR Sbjct: 120 LRNGVDIIVATPGRFMDLYRSGEIVTKEIRTMVLDEADKMMDMGFMPQIRSILEIIPTKR 179 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKR-KRELLSHMI 240 QNLLFSATF ++ L+ + L P+++EV + + +D V+Q ++ R K +L +++ Sbjct: 180 QNLLFSATFGGRVERLSSEFLEAPIKVEVTPQASTADMVSQVIYEAPNFRTKINMLDYLM 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGI---RSAAIHGNKSQGARTRALADFKSGDIR 297 + ++Q+V++F RTK A+++ + L++ I + IH NK Q R A+ FK G+I+ Sbjct: 240 RQEDFQRVIIFARTKGTADNIYKFLSRKVIEPEKIRVIHANKGQNTRINAMDAFKEGNIQ 299 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 VLV+TD+AARG+D+ E+ HV+N++LP + EDYVHRIGRTGRA TGEA++ + E + Sbjct: 300 VLVSTDVAARGIDVAEVSHVINFDLPLIYEDYVHRIGRTGRANRTGEAITFLTKAEEYHV 359 Query: 358 RDIEKLLKKEIPRIAIPG 375 + IE+++K IPR +P Sbjct: 360 QKIERIIKATIPRQPLPA 377 >UniRef50_C7PAU3 DEAD/DEAH box helicase domain protein n=7 Tax=Bacteria RepID=C7PAU3_CHIPD Length = 414 Score = 327 bits (838), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 176/395 (44%), Positives = 250/395 (63%), Gaps = 4/395 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+ +S +I R++ E G++ PT IQ +AIP++L+G D++A AQTGTGKTA F +P+L Sbjct: 1 MKFEQYRISEEIKRSLEELGFKRPTDIQFKAIPSILKGDDVLAIAQTGTGKTAAFAIPVL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L P K + VR +++ PTRELA QI E +KY + L + GGV PQ+ Sbjct: 61 HKLQQYHPR-KTKGEVRCVVMVPTRELAVQISEVFERLAKYTKLNILGLHGGVDQAPQLK 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL GVDVL+ATPGR+ DL Q + L Q IL+LDEAD MLD+GFI DIR VL LP + Sbjct: 120 KLAQGVDVLIATPGRMFDLISQGFIDLSQTGILILDEADHMLDLGFIRDIRDVLKHLPRR 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q L FSAT +DIK LA +++NP+ I+++ ++ S V V +V KR L ++ Sbjct: 180 HQTLFFSATIDEDIKDLAYSVVNNPIRIQISPQDPVSKNVQHAVAYVGMDDKRFFLERLV 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + ++LVF RTK A +A + + GI+S +HG K Q R + + +FK GDI++L+ Sbjct: 240 KEFPENKILVFVRTKVRAERVAAAMERVGIKSLTMHGGKEQDNRLQVMDEFKKGDIKLLI 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK-LLRD 359 TD+ ARG+DI ++ +VVNY+LP+VPE+YVHR+GRTGR G+A+S C DE K +L Sbjct: 300 TTDVNARGIDIPDVEYVVNYDLPDVPENYVHRVGRTGRGVKKGQAVSF-CSDEEKPVLDA 358 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIK-AEPIQNGRQQ 393 I++ L KEI + I + +I +E I N Q Sbjct: 359 IQQYLGKEITVMKIDKNDYRETISFSEDIPNDNWQ 393 >UniRef50_A3WBD4 DNA and RNA helicase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WBD4_9SPHN Length = 497 Score = 327 bits (838), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 172/371 (46%), Positives = 235/371 (63%), Gaps = 9/371 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F LGLSP++L+AV + GY EPT IQ +AIPAVL +DL+ AQTGTGKTA F LP++ Sbjct: 36 MTFADLGLSPELLKAVEDAGYTEPTAIQAEAIPAVLMMKDLIGIAQTGTGKTASFVLPMI 95 Query: 61 QHLITRQPHAKGRRPV---RALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINP 117 + A GRR R+LIL PTRELAAQ+ EN Y +++ ++ GGV + Sbjct: 96 DVM------AAGRRRALMPRSLILEPTRELAAQVAENFEKYGANHDLKMALLIGGVQMGD 149 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 Q+ L GVDVL+ATPGRL+DL + + L+ E+LV+DEADRMLDMGFI DI + KL Sbjct: 150 QLKTLDEGVDVLIATPGRLMDLFERGKILLNGCELLVIDEADRMLDMGFIPDIEFICDKL 209 Query: 178 PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 P RQ +LFSAT I+ LA+K L NP IE R T + +T V ++KR+ L Sbjct: 210 PETRQTMLFSATMPAPIEKLAKKFLSNPKRIETTRAATTNKDITAFKVPVKARQKRDTLE 269 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++ + ++F K L + L + G S IHG+ Q +R + L FKSGD+ Sbjct: 270 WLLANDQVETAIIFANRKTTVRELNKHLQRQGFASGEIHGDMDQSSRLKELDRFKSGDVN 329 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVA+D+AARGLDI+ + HV N++ P P+DYVHRIGRTGRA A G A +LV ++ + + Sbjct: 330 ILVASDVAARGLDIKGVSHVFNFDTPWHPDDYVHRIGRTGRAGAKGRAFTLVADEDAEAI 389 Query: 358 RDIEKLLKKEI 368 ++EKL +I Sbjct: 390 ANVEKLTGAKI 400 >UniRef50_C8WWM6 DEAD/DEAH box helicase domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WWM6_ALIAD Length = 541 Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 166/376 (44%), Positives = 246/376 (65%), Gaps = 7/376 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF+S GL+ +L+A+ + G+ EP+PIQ IP VLEGRD++ AQTGTGKTA F +PL++ Sbjct: 18 SFESFGLNRRVLQAIHDMGFEEPSPIQAACIPVVLEGRDVIGQAQTGTGKTAAFGIPLVE 77 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + T +P V+A++LTPTRELA Q+ +R +KY +RS+ ++GG SI Q+ Sbjct: 78 RVST-EPR------VQAIVLTPTRELAIQVAGEIRKIAKYKRVRSVPIYGGQSIVHQIRA 130 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV +++ TPGR+LD H+ + L V ++VLDEAD MLDMGFI DI +L + P+ R Sbjct: 131 LKQGVQIVIGTPGRVLDHIHRGTLSLSDVRMVVLDEADEMLDMGFIDDIEAILRETPSDR 190 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q +LFSATF +++K LA + + +P I V R Q+ Q + V ++ K + L ++ Sbjct: 191 QTMLFSATFPNEVKRLALRYMRDPQHITVNRGEVTVPQIDQVCYKVLERNKLDSLCRIVD 250 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + Q ++F RTK G + L E L G + +HG+ SQ R R + F+ +I +LVA Sbjct: 251 SEDIQLGIIFCRTKRGVDDLVEALLARGYLADGLHGDLSQAQRDRVMRKFRKNEIELLVA 310 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD++++ HV+NY++P PE YVHRIGRTGRA G A++LV E+KLL+ IE Sbjct: 311 TDVAARGLDVDDVTHVINYDVPQDPESYVHRIGRTGRAGKRGLAITLVTPREYKLLKQIE 370 Query: 362 KLLKKEIPRIAIPGYE 377 + +K++I +P E Sbjct: 371 REIKQKITVREVPSLE 386 >UniRef50_Q3BYG2 ATP-dependent RNA helicase n=18 Tax=Proteobacteria RepID=Q3BYG2_XANC5 Length = 453 Score = 324 bits (830), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 175/378 (46%), Positives = 239/378 (63%), Gaps = 4/378 (1%) Query: 5 SLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLI 64 SL L P A+A G TPIQ IP +L RDL+A+AQTG+GKT + LPLL + Sbjct: 32 SLQLQPVFESALARAGVHALTPIQVAMIPPMLAARDLIATAQTGSGKTLAYALPLLLQRL 91 Query: 65 TRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL--NIRSLVVFGGVSINPQMMKL 122 Q + R + LIL PTREL AQ+ + + + L ++ + GG +INPQ+M L Sbjct: 92 --QAPEQAPRVLGGLILVPTRELVAQVAQTLLSLAAALPRRLKIVAATGGEAINPQLMAL 149 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 RGG D+++ATPGRLLDL NA++L QV LVLDEADR+LD+GF ++ R+L LPA+RQ Sbjct: 150 RGGADIVIATPGRLLDLVTHNALRLSQVSTLVLDEADRLLDLGFGAELDRILALLPAQRQ 209 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 ++L SATF I +LA++ L +PL I + +TQ VD ++ +LL H++ + Sbjct: 210 SVLVSATFPAAIASLAKRRLRDPLRITHDAMPEQAPSITQRAIAVDAGQRTQLLRHLLLE 269 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 W Q+LVF ++HGA+ +AE+L+K GI + +HG SQG R R L FK D++VLVAT Sbjct: 270 HGWPQLLVFVASRHGADKVAEKLSKTGIAALPLHGELSQGRRERTLRAFKQADVQVLVAT 329 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+A RG+DI+ LP V+NY+LP DY HRIGRT RA A+G A+S V D + R IEK Sbjct: 330 DLAGRGIDIDALPAVLNYDLPRSTVDYTHRIGRTARAGASGVAISFVTADSAQQWRLIEK 389 Query: 363 LLKKEIPRIAIPGYEPDP 380 +P I G+EP P Sbjct: 390 RQGLRVPTSVIEGFEPTP 407 >UniRef50_B8JG82 DEAD/DEAH box helicase domain protein n=8 Tax=Bacteria RepID=B8JG82_ANAD2 Length = 488 Score = 323 bits (828), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 175/380 (46%), Positives = 242/380 (63%), Gaps = 9/380 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L LS L+A+ G+ PTPIQ QAIP L GRD++ +A TGTGKTA F LP+++ Sbjct: 16 TFADLNLSEKTLQALERAGFEHPTPIQAQAIPPALGGRDVIGAAATGTGKTAAFLLPIIE 75 Query: 62 HL-------ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVS 114 L R A G+ RAL+L PTRELA QI + + + ++R +V GGV Sbjct: 76 RLGGGAPAPKDRPAAAHGKPGPRALVLAPTRELAVQIAGELDRFGRGRHVRGALVIGGVG 135 Query: 115 INPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVL 174 + Q LR +V+VATPGRL+D Q +LD +E+LVLDEADRMLDMGF ++R+L Sbjct: 136 MGAQSAALRDH-EVIVATPGRLVDHLQQGTARLDGLEVLVLDEADRMLDMGFAPQLKRIL 194 Query: 175 TKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRE 234 ++P RQ LLFSAT + ++ A L +P+ +EVAR T +++ Q V +++ K Sbjct: 195 ARVPKVRQTLLFSATMAGEVAEFARAHLRDPVRVEVARSGTLAERAEQRVFLPEQREKLP 254 Query: 235 LLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSG 294 LL ++ + + LVFTRTK A+ +A+ L + G + A IH ++SQ R AL F+ G Sbjct: 255 LLMALLEEDDLS-TLVFTRTKRRADKVAKALQRAGHKVARIHADRSQAQRRMALEGFRDG 313 Query: 295 DIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEH 354 RVLVATDIAARG+D+ E+ HVVN++LP+VPEDYVHR+GRT R AA+G A + +E Sbjct: 314 QYRVLVATDIAARGIDVAEIGHVVNFDLPHVPEDYVHRVGRTARMAASGRASAFASPEEL 373 Query: 355 KLLRDIEKLLKKEIPRIAIP 374 LLRDIE+L + IPR +P Sbjct: 374 DLLRDIERLTRAPIPRAEVP 393 >UniRef50_A8IAJ3 Helicase n=4 Tax=Alphaproteobacteria RepID=A8IAJ3_AZOC5 Length = 582 Score = 322 bits (825), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 183/372 (49%), Positives = 233/372 (62%), Gaps = 6/372 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF LGLS +L AVA GY PTPIQ QAIP VL RD++ AQTGTGKTA FTLP+L Sbjct: 64 MSFSELGLSEKVLSAVAATGYTTPTPIQAQAIPHVLARRDVLGLAQTGTGKTAAFTLPML 123 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L Q A+ R P R LIL PTRELAAQ+ EN Y K + ++ GGVS Q Sbjct: 124 TLL--EQGRARARMP-RTLILEPTRELAAQVEENFVRYGKNHKLNVALLIGGVSFGDQDT 180 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL GVDVL+ATPGRLLD + + L +E+LV+DEADRMLDMGFI DI R+ +P Sbjct: 181 KLLRGVDVLIATPGRLLDHVERGRLLLSGIEVLVIDEADRMLDMGFIPDIERICKLVPFT 240 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK--RKRELLSH 238 RQ L FSAT +I+ L + L NP+ +EV++ +A+ +TQ + ++ KRE L Sbjct: 241 RQTLFFSATMPPEIQRLVSQFLSNPVRVEVSKPASANTSITQLLVASGREDYEKRETLRE 300 Query: 239 MIGKGN-WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 +I + Q +VF K + L K G +HG+ Q ART+AL F++G+ Sbjct: 301 LIRNADQLQNGIVFCNRKRDVAVVHRSLQKHGFNVVCLHGDMDQHARTQALDQFRTGEAT 360 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVA+D+AARGLDI + HV NY++P+ EDYVHRIGRTGRA TG A+ LV D+ K L Sbjct: 361 LLVASDVAARGLDIPAVSHVFNYDVPHHSEDYVHRIGRTGRAGRTGTAIMLVTHDDAKSL 420 Query: 358 RDIEKLLKKEIP 369 IEKL+ IP Sbjct: 421 AAIEKLIGNAIP 432 >UniRef50_A5FST0 DEAD/DEAH box helicase domain protein n=5 Tax=Dehalococcoides RepID=A5FST0_DEHSB Length = 561 Score = 321 bits (822), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 181/451 (40%), Positives = 266/451 (58%), Gaps = 12/451 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF+S P ++ V GY+EPTPIQ QAIP ++ G D++ AQTGTGKTA + LP++ Sbjct: 1 MSFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPII 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q +++ +GR VR L++ PTRELA QI ++ R + IR ++GGV+++ Q+ Sbjct: 61 QKMLS---TPRGR--VRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIR 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +LR GVDV+VA PGRLLD + + + VE L++DEADRM DMGF DI+ +L L Sbjct: 116 RLRSGVDVVVACPGRLLDHIWRGTIDVCGVETLIIDEADRMFDMGFQPDIQSILKCLVQP 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT +++ L + NP+ ++V ++ S V +K LL ++ Sbjct: 176 HQTLLFSATMPPEVRKLTLETQTNPVTVQVGTQSPVSSVSHSVYP-VKSHQKTPLLLEIL 234 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + VL+F RTK+GA +LA++++K G +A++ GN SQ R + F+ G+ ++LV Sbjct: 235 KTVETKSVLIFARTKYGAENLADEISKAGFTTASLQGNLSQNRRHAVMEGFRRGNFKILV 294 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARGLDI+ + HV+NY++P+ PEDY HRIGRTGR TG+A SLV + ++RDI Sbjct: 295 ATDIAARGLDIDHISHVINYDMPDSPEDYTHRIGRTGRFDRTGQAFSLVTGRDGDMVRDI 354 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 ++LL I R+ + G+ D + QN Q+R R G +P S Sbjct: 355 QRLLSSPIQRLRVDGF--DYATTRNDGQNQSQRRDFAPRRGYSHGGYNRPEMAV-NETSQ 411 Query: 421 SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPA 451 + P+E P + A+P R RP A Sbjct: 412 TDTPSEMP---VSPARPFNPGFRPSRPANSA 439 >UniRef50_Q28T45 DEAD/DEAH box helicase-like protein n=18 Tax=Alphaproteobacteria RepID=Q28T45_JANSC Length = 644 Score = 320 bits (820), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 172/382 (45%), Positives = 242/382 (63%), Gaps = 12/382 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L L+P + +A+ E GY PTPIQ AIP L GRD++ AQTGTGKTA FTLP++ Sbjct: 12 TFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPMIT 71 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L + A+ R P R+L+L PTRELAAQ+ EN Y+K++ + ++ GGVS Q Sbjct: 72 MLA--RGRARARMP-RSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQEQA 128 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 + GVDVL+ATPGRLLD + + L+ V+++V+DEADRMLDMGFI DI R+ +P R Sbjct: 129 IDKGVDVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLDMGFIPDIERIFGLVPFTR 188 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQH-VHF------VDKKRKRE 234 Q L FSAT + +I+ + L NP +IEV R++T S + Q + F K KR+ Sbjct: 189 QTLFFSATMAPEIERITNTFLSNPEKIEVERQSTTSATIEQRLIEFKAPRRDAQAKMKRD 248 Query: 235 LL-SHMIGKGN-WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFK 292 +L + + +G+ ++ ++F K + +A+ L K + + IHG+ Q R R LA F+ Sbjct: 249 MLRAAITAEGDAFRNAIIFCNRKVDVDIVAKSLKKHNLNAEPIHGDLDQSHRMRTLAGFR 308 Query: 293 SGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVD 352 G I +LVA+D+AARGLDI + HV+NY++P+ EDYVHRIGRTGRA TG A++L Sbjct: 309 DGSITLLVASDVAARGLDIPNVSHVINYDVPSHAEDYVHRIGRTGRAGKTGVAITLCVPS 368 Query: 353 EHKLLRDIEKLLKKEIPRIAIP 374 + K L IE L+K+ IPR P Sbjct: 369 DEKYLGAIEGLIKQPIPRAEAP 390 >UniRef50_C6HUU6 Putative ATP-dependent helicase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUU6_9BACT Length = 472 Score = 318 bits (815), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 171/368 (46%), Positives = 238/368 (64%), Gaps = 8/368 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF++LGL+PD+LRA+++ + PTPIQ+Q IP ++EGRD++ AQTG+GKT GF LP L Sbjct: 1 MSFETLGLNPDLLRALSDLKHESPTPIQKQTIPPIIEGRDVLGVAQTGSGKTGGFLLPSL 60 Query: 61 QHLITRQPHAKGRRPV-RALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 R A+G R + L+L+PTRELA QI + R+Y KYL R++++ GG + Q+ Sbjct: 61 H----RNKRAQGNRTRHQILVLSPTRELAGQIERSAREYGKYLRSRTVLLVGGTDMRRQI 116 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 LR D+++ATPGRL+D + + L V +VLDEADRMLDMGF+ D+ +L L Sbjct: 117 DFLRRPWDLVIATPGRLIDHMQRGTINLSHVHTVVLDEADRMLDMGFLPDVETILKALHP 176 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLSH 238 +RQ LLF+AT I+ L + +P+ I + + + Q V + +K LL Sbjct: 177 ERQTLLFTATLPARIQMLTKTYQKDPVLIRLETASAPPVSIDQEVVAISHGAQKWGLLKT 236 Query: 239 MIGKGNWQ--QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 ++ + Q L+FTRTK GA LA QL +G S A+HG+KSQ R R L+ F++G Sbjct: 237 ILTEPQTTEGQTLIFTRTKRGAEDLANQLLAEGFPSDALHGDKSQSQRNRVLSKFRAGQT 296 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 R+LVATD+AARGLDI+ + V+NY+LP PEDYVHRIGRTGRA +G A+S + L Sbjct: 297 RILVATDVAARGLDIDTVTCVINYDLPQSPEDYVHRIGRTGRAGRSGRAISFCHPADRNL 356 Query: 357 LRDIEKLL 364 LRDIE+LL Sbjct: 357 LRDIERLL 364 >UniRef50_Q0K893 ATP-dependent RNA helicase n=129 Tax=Proteobacteria RepID=Q0K893_RALEH Length = 646 Score = 317 bits (813), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 179/401 (44%), Positives = 241/401 (60%), Gaps = 23/401 (5%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +LGL ILRA++E Y PTP+Q QAIPA L GRDL+ S+QTG+GKTA F LP +Q Sbjct: 60 FATLGLDAAILRALSELNYNTPTPVQAQAIPAFLAGRDLLVSSQTGSGKTAAFMLPAIQR 119 Query: 63 LITRQP----------HAKGRRPVRA------LILTPTRELAAQIGENVRDYSKYLNIRS 106 I+ P KG+RP + L+LTPTRELA Q+ E Y + N+R Sbjct: 120 -ISEMPAPQRATEPAKRMKGKRPRPSPAQPALLVLTPTRELALQVTEAAAKYGR--NLRR 176 Query: 107 LV---VFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLD 163 +V + GG+ Q+ L D+LVATPGRLLD + L +++LV DEADRMLD Sbjct: 177 IVCASILGGMPYPKQLAALAKMPDILVATPGRLLDHIDAGRIDLSALQMLVFDEADRMLD 236 Query: 164 MGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQH 223 MGF DI ++ PA RQ L+FSAT I LA + L +P IE+A + Q Sbjct: 237 MGFADDIDAIVNATPATRQTLMFSATLDARIAQLASRQLRDPQRIEIAAARADQSHIEQR 296 Query: 224 VHFVDKKRKRE-LLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQG 282 +HF D +E LL H++ +Q +VFT TK A+ LAE+L+ G + A+HG+ +QG Sbjct: 297 LHFTDDMSHKERLLDHLLRDATLKQAIVFTATKRDADSLAERLSDTGFSAGALHGDMTQG 356 Query: 283 ARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAAT 342 AR R L + G++RVLVATD+AARG+D+ ++ HVVN++LP EDYVHRIGRTGRA + Sbjct: 357 ARNRTLTALRRGNLRVLVATDVAARGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRS 416 Query: 343 GEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIK 383 G A++LV ++ + IE+ + I I G EP S K Sbjct: 417 GTAINLVNHNDMFQWKRIERFTNQRIDASVIEGLEPRRSPK 457 >UniRef50_B2V9H9 DEAD/DEAH box helicase domain protein n=4 Tax=Hydrogenothermaceae RepID=B2V9H9_SULSY Length = 405 Score = 317 bits (811), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 166/372 (44%), Positives = 250/372 (67%), Gaps = 8/372 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L LS + L+++ E GY +PT IQ++AIPAV+ G+DL+A AQTGTGKTA F +P+++ Sbjct: 7 TFKDLNLSKETLKSLDELGYSKPTEIQEKAIPAVMTGKDLVAQAQTGTGKTAAFGVPIVE 66 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + +Q + V+ALIL PTRELA Q+ + +++ K + +L V+GG SI+ Q+ Sbjct: 67 KVNPKQ------KKVQALILVPTRELAIQVAKEIKELGKNKKVYTLAVYGGKSISHQINF 120 Query: 122 LRGGVDVLVA-TPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ G DV+V TPGR+ DL + + LD V++ VLDEADRML+MGFI DI +++ LP Sbjct: 121 LKKGSDVVVVGTPGRVRDLLERGVLNLDNVKMFVLDEADRMLEMGFIDDIEEIMSYLPED 180 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLE-IEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQNLLFSAT +I LAE+ L+ E I V +++ Q ++ V+ + K + L+ + Sbjct: 181 RQNLLFSATMPKEILDLAEEFLNENYETIRVKPDEVTVEKIKQIIYRVNPRDKFKKLTEV 240 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + ++V++FT+TK A+ LAE+LN++G ++AIHG+ SQ R L +F++G +++L Sbjct: 241 LSQNEAEKVIIFTQTKIEADELAERLNEEGFNASAIHGDFSQKKRETVLHNFRTGKLKIL 300 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLDI+ + V+NY LP E Y+HRIGRTGRA G A+S++ E K L++ Sbjct: 301 VATDVAARGLDIKGVDLVINYGLPRDAESYIHRIGRTGRAGREGTAISIMTPSEDKQLQN 360 Query: 360 IEKLLKKEIPRI 371 I+K K I I Sbjct: 361 IQKKTKANIEVI 372 >UniRef50_Q7NHM7 Gll2508 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NHM7_GLOVI Length = 437 Score = 315 bits (808), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 163/361 (45%), Positives = 234/361 (64%), Gaps = 6/361 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F +LGLS +++A+ E G+ +PTPIQ ++IP +L+GRDL+A AQTGTGKTA F LPL Sbjct: 4 AFSALGLSESVVKALDELGFEQPTPIQLKSIPFLLDGRDLLAQAQTGTGKTAAFGLPL-- 61 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + R R V+AL+L PTRELA Q+ E + YSK+ +R L ++GG I+ QM + Sbjct: 62 --VDRSDPQDAR--VQALVLAPTRELAVQVCEAIHTYSKHSGVRVLPIYGGQPIDRQMRR 117 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR G ++V TPGR+LDL + ++ L + LVLDEAD+MLDMGFI +++ +L P +R Sbjct: 118 LRAGAQIVVGTPGRVLDLMRRGSLDLSALRTLVLDEADQMLDMGFIEEVQTILDAAPPER 177 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q + FSAT I+ LA + L P+ + + + + Q V+FV+ K + + L+ ++ Sbjct: 178 QLVFFSATLPASIRKLAARHLRTPMTLTMPAEERDTPAIAQRVYFVNFKNRAQALTRVLA 237 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + L+FTRTK A+ LAEQL DG R+ A+HG+ +Q AR L F+ + V+VA Sbjct: 238 AEDPASALIFTRTKQAADELAEQLQDDGHRAEALHGDLNQSAREAVLGRFRRQQLNVVVA 297 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLDI +L HV+NY++P E Y+HRIGRTGRA TG A+S + LR IE Sbjct: 298 TDVAARGLDIADLSHVINYDMPQDGESYIHRIGRTGRAGRTGVAISFALPTDRYRLRLIE 357 Query: 362 K 362 + Sbjct: 358 R 358 >UniRef50_Q11WD3 Possible ATP-dependent RNA helicase n=8 Tax=Sphingobacteriales RepID=Q11WD3_CYTH3 Length = 463 Score = 315 bits (808), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 177/456 (38%), Positives = 275/456 (60%), Gaps = 31/456 (6%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+ L L+ +L A+ E GY EPT IQ +AIP +L G D++ AQTGTGKTA + LP+L Sbjct: 5 LNFEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGKTAAYALPIL 64 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + +A+G P RA+I PTREL QI ++ +KY ++R + ++GG+ Q Sbjct: 65 MKI----KYAQGHNP-RAVIFGPTRELVMQIEIAMKQLAKYTDLRIVALYGGIGPKLQKE 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GVD++VATPGR LDL + + L +V+ +VLDEAD+M+DMGF+ +R++L +P K Sbjct: 120 HLQKGVDIIVATPGRFLDLYLEEEIVLKEVKTMVLDEADKMMDMGFMPQLRKMLEVIPRK 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFV-DKKRKRELLSHM 239 RQNLLFSAT S+ ++ L E+ L P++IEV + T + ++Q ++ V + K K LL ++ Sbjct: 180 RQNLLFSATMSERVERLTEEFLEYPMKIEVTPQATPATLISQKLYKVPNFKTKIHLLEYL 239 Query: 240 IGKG-NWQQVLVFTRTKHGANHLAEQLNKDGIRSA-AIHGNKSQGARTRALADFKSGDIR 297 I K + + ++F RTK A+ + + + + + IH NK Q +R A+ DFK G I+ Sbjct: 240 IRKDESVTRAIIFVRTKKSADDIYKFIIRKTTNTCRIIHANKDQNSRINAMDDFKDGTIK 299 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVATD+AARG+D+ E+ HV+N+++P + +DY+HRIGRTGRA TG A++ E + Sbjct: 300 ILVATDVAARGIDVHEVSHVINFDVPIIYDDYIHRIGRTGRANHTGVAITFATEAEMYHI 359 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQP------- 410 IEK+++ +IP +P E + G ++ R + ++ P Sbjct: 360 EKIEKIIRMQIPVEELPA-------AVEITETGFEESQEFARELDFYKKKEDPTYKGAFH 412 Query: 411 ---RRGEGGAKSASAKPAE----KPSR--RLGDAKP 437 R +G AK + KP + KPS+ RLG KP Sbjct: 413 EKKRDLKGDAKQTAYKPGKSVKAKPSKEIRLGKNKP 448 >UniRef50_B6IS62 DEAD/DEAH box helicase protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IS62_RHOCS Length = 528 Score = 315 bits (808), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 176/387 (45%), Positives = 242/387 (62%), Gaps = 2/387 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF LGL P +L+AV E G+ PTPIQQQA+PA L GRD++ASA TGTGKTA F LP L Sbjct: 8 VSFSDLGLLPHLLKAVEELGFTTPTPIQQQALPAALTGRDVVASANTGTGKTAAFVLPSL 67 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q + T A+ R L+LTPTRELA+Q+ E+VR+ SK+ I++ + GG+ Q+ Sbjct: 68 QRIAT-TARAEAAWGPRVLVLTPTRELASQVLESVRNLSKFGRIQTGTILGGMPYRQQLE 126 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR VD++VATPGRL+D + + L VE+LVLDEADRMLDMGF + + PA+ Sbjct: 127 MLRRRVDLIVATPGRLMDHMERGRLDLSGVEVLVLDEADRMLDMGFREAVEFIAAACPAE 186 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLSHM 239 RQ LLF+AT + LA+ L +P+ I+VA + + QV Q D + K LL + Sbjct: 187 RQTLLFTATLDRTAERLAQTLTRDPVRIDVAGKAVVTAQVEQRWLRADGLEHKHRLLETL 246 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 +G + + +VF TK A+ LA+ L++ G ++ +HG+ Q R R + + G I V+ Sbjct: 247 LGGEEFGKGIVFIATKLDADRLADTLSEKGHKAMPLHGDMQQRDRNRVVQWLRDGRINVI 306 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+DI +L HV+N++LP EDYVHRIGRTGRA A+G + SL E + +R Sbjct: 307 VATDVAARGIDIADLTHVINFDLPKQAEDYVHRIGRTGRAGASGVSYSLFTRMEWRQVRA 366 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEP 386 IE K +PG EP P + P Sbjct: 367 IEAYTNKAADMHVLPGLEPMPEPERRP 393 >UniRef50_Q6AMK6 Probable ATP-dependent RNA helicase n=1 Tax=Desulfotalea psychrophila RepID=Q6AMK6_DESPS Length = 632 Score = 314 bits (804), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 166/374 (44%), Positives = 234/374 (62%), Gaps = 11/374 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L D++ + + G+ +PTPIQ++AIP +L G DL+ AQTGTGKTA F LPLL + Sbjct: 57 FTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLNN 116 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + ++ V+AL+L PTRELA Q+G+ + YS LVV+GG S Q+ L Sbjct: 117 I------DFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGL 170 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 R G V+V TPGRLLDL Q ++KLDQ++ LVLDEAD ML MGFI DI +L++ P RQ Sbjct: 171 RRGARVVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPKDRQ 230 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 +LFSAT S + ++A + LH+P I ++ + + Q + ++ K ++ + Sbjct: 231 TMLFSATLSSRVMSIANRYLHSPESISISPKQMIGSSIEQRYYLINNSDKIAAITRVFEV 290 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 + L+F RT+ + LA +L G + + G+ SQ ARTR L+ FK G I+VLVAT Sbjct: 291 ETVESALIFARTRATVSELANELISRGFAAEGLSGDLSQEARTRVLSRFKKGQIKVLVAT 350 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE- 361 D+AARGLDI+++ HV NY+LP PE YVHRIGRTGRA +G A+SLV + + + R IE Sbjct: 351 DVAARGLDIDDISHVFNYDLPEDPEVYVHRIGRTGRAGRSGTAISLVTLRDRWMHRRIEQ 410 Query: 362 ----KLLKKEIPRI 371 KL+K E+P + Sbjct: 411 YTGKKLIKGELPTV 424 >UniRef50_A6V0P4 ATP-dependent RNA helicase RhlB n=15 Tax=Pseudomonadaceae RepID=A6V0P4_PSEA7 Length = 529 Score = 313 bits (803), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 163/370 (44%), Positives = 232/370 (62%), Gaps = 4/370 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L+P ++ A+ + G+ TPIQ Q + L G+D + AQTGTGKTA F + ++ Sbjct: 143 FHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQ 202 Query: 63 LI-TRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L+ T P + RALI+ PTREL QI ++ +KY + + GG+ + Q+ + Sbjct: 203 LLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQ 262 Query: 122 LRG-GVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L D+LVATPGRLLD + V LD VE++VLDEADRMLDMGFI +R+++ + P K Sbjct: 263 LEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHK 322 Query: 181 --RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ LLFSATF+DD+ LA++ +P +E+ N ASD V QHV+ V K +LL + Sbjct: 323 GERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVAGSDKYKLLYN 382 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + NW++V+VF K + E+L KDGI +A + G+ Q R R L F+ G IRV Sbjct: 383 LVAQNNWERVMVFANRKDEVRRIEERLTKDGISAAQMSGDVPQHKRIRTLEGFREGKIRV 442 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+A RG+ I+ + HV+N+ LP P+DYVHRIGRTGRA A+G ++S D+ L Sbjct: 443 LVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISFAGEDDAFALP 502 Query: 359 DIEKLLKKEI 368 IE+LL ++I Sbjct: 503 PIEELLGRKI 512 >UniRef50_C6VX00 DEAD/DEAH box helicase domain protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VX00_DYAFD Length = 590 Score = 313 bits (801), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 167/391 (42%), Positives = 248/391 (63%), Gaps = 10/391 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ LGL+ +IL+A+ E G+ +P+PIQ Q IPAVL+G D++ AQTGTGKTA F +P+L+ Sbjct: 8 TFEELGLNENILKALQEMGFEKPSPIQAQGIPAVLQGSDVIGQAQTGTGKTAAFGIPVLE 67 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 + T V+ALIL PTRELA Q+ E + SK++ +R ++GG SI+ Q+ Sbjct: 68 RIDTSS------NAVQALILCPTRELAVQVSEELGRLSKFMRGVRIEAIYGGDSIDRQIR 121 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GV ++V TPGR++D + +K D+V ++VLDEAD MLDMGF DI +L +P Sbjct: 122 SLKKGVHIVVGTPGRVMDHMERRTLKFDEVRMMVLDEADEMLDMGFREDIESILADMPED 181 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHF-VDKKRKRELLSHM 239 RQ +LFSAT S I ++ ++ L++P I+V R N ++Q + V+F V + K E+++ + Sbjct: 182 RQTILFSATMSKPIMSITKRFLNDPTLIKVVR-NELTNQNIEQVYFEVKPQAKVEVMTRL 240 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I + + +LVF TK + + E L G S IHG+ Q R+ ++ FK+G +L Sbjct: 241 IDMHHIKSLLVFCNTKRKVDEIVEDLQLRGYASEGIHGDLRQQQRSNVMSKFKAGVTTIL 300 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+ L V+NY++P E YVHRIGRTGRA +G+A SLV DE L+ Sbjct: 301 VATDVAARGIDVSGLDGVINYDIPMDEEYYVHRIGRTGRAGMSGKAFSLVARDEKYRLKS 360 Query: 360 IEKLLKKEIPRIAIPGYEPDPSI-KAEPIQN 389 IE K +I + IP +E + KA ++N Sbjct: 361 IESYTKVKIEKGVIPSFEDIVGVRKARFVEN 391 >UniRef50_B4SPP3 DEAD/DEAH box helicase domain protein n=16 Tax=cellular organisms RepID=B4SPP3_STRM5 Length = 646 Score = 312 bits (800), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 165/378 (43%), Positives = 234/378 (61%), Gaps = 7/378 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F LGLS +++AV GY P+PIQ IPA+LEGRD++ AQTGTGKTA F LP+L Sbjct: 9 LQFAQLGLSESVMQAVTAIGYETPSPIQAATIPAMLEGRDVLGQAQTGTGKTAAFALPVL 68 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYS-KYLNIRSLVVFGGVSINPQM 119 ++ +Q + AL+L PTRELA Q+ E + YS K R L V+GG Q+ Sbjct: 69 SNIDLQQIKPQ------ALVLAPTRELAIQVAEAFQSYSSKIPGFRVLPVYGGQPYGQQL 122 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 LR GV ++V TPGR++D ++ + L +++ LVLDEAD ML MGFI D+ VL KLPA Sbjct: 123 SALRRGVHIVVGTPGRVIDHLDRSTLDLSELKTLVLDEADEMLRMGFIDDVEAVLKKLPA 182 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 KRQ LFSAT I+ +A+ L +P+E+ +A + T S + Q +V K + L+ + Sbjct: 183 KRQVALFSATMPPQIRRIAQTYLQDPVEVTIAAKTTTSANIRQRYWWVSGMHKLDALTRI 242 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + +++F RTK G LA +L G+ +AAI+G+ Q R R +A K G + +L Sbjct: 243 LEVEPFDAMIIFARTKAGTEELASKLQARGLAAAAINGDMQQAQRERTIAMLKEGKLDIL 302 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD+E + HV+NY++P E YVHRIGRTGRA +GEA+ E +LR Sbjct: 303 VATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFATPREKGMLRQ 362 Query: 360 IEKLLKKEIPRIAIPGYE 377 IE+ ++ I + +P E Sbjct: 363 IERATRQPIEEMQLPSVE 380 >UniRef50_B0SYC6 DEAD/DEAH box helicase domain protein n=33 Tax=Alphaproteobacteria RepID=B0SYC6_CAUSK Length = 678 Score = 311 bits (798), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 169/365 (46%), Positives = 226/365 (61%), Gaps = 6/365 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LGLSP L+AVA+ GY TPIQ AIP L G+D++ AQTGTGKTA FTLPL+ Sbjct: 4 FSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLIDK 63 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 L+ + AK R P RAL++ PTRELA Q+ + Y+K + ++ GGVS Q KL Sbjct: 64 LMNGR--AKARMP-RALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQEKKL 120 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 GVDVL+ATPGRLLD + + + V+ LV+DEADRMLDMGFI DI R+ P K+Q Sbjct: 121 DRGVDVLIATPGRLLDHFERGKLLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTPPKKQ 180 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQ---HVHFVDKKRKRELLSHM 239 L FSAT +I L ++ L +P+ IE +R T ++ +TQ V D K KR L + Sbjct: 181 TLFFSATMPPEITRLTKQFLKDPVRIEASRPATTNENITQLMVKVPSSDPKAKRLALRAL 240 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I K + +VF K + +A+ L G +AAIHG+ Q RT+ LA F+ G +++L Sbjct: 241 IEKAQIETGIVFCNRKTEVDVVAKSLKSHGFDAAAIHGDLDQSQRTKTLAAFRDGSLKIL 300 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VA+D+AARGLDI + HV NY++P+ +DYVHRIGRTGRA +G LV + K Sbjct: 301 VASDVAARGLDIPAVSHVFNYDVPHHADDYVHRIGRTGRAGRSGVTYMLVTPADDKGFDK 360 Query: 360 IEKLL 364 + KL+ Sbjct: 361 VVKLI 365 >UniRef50_Q17W71 ATP-dependent RNA helicase n=19 Tax=Helicobacter RepID=Q17W71_HELAH Length = 494 Score = 311 bits (796), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 161/383 (42%), Positives = 237/383 (61%), Gaps = 7/383 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF+ LGL +L++V E G+ P+PIQ++AIPAVL+GRD++A AQTGTGKTA F LP++ Sbjct: 23 SFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPIIN 82 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 +L K + AL++TPTRELA QI + + K+ +++ V+GG S+ Q Sbjct: 83 NL-------KNNHTIEALVITPTRELAMQISDEIFKLGKHTKTKTVCVYGGQSVKKQCEF 135 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 ++ V++ATPGRLLD + + +++VLDE+D MLDMGF+ DI + LP++ Sbjct: 136 IKKNPQVMIATPGRLLDHLKNDRIHKFVPKVVVLDESDEMLDMGFLDDIEEIFDYLPSEA 195 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT + IK LA+K+L NP++I +A N + +TQ + +++ + E + H++ Sbjct: 196 QILLFSATMPEPIKKLADKILENPIKIHIAPSNITNTDITQRFYVINEHERSEAIMHLLD 255 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 ++ +VFTRTK A+ L + L +S A+HG+ Q R ++ FK D VLVA Sbjct: 256 TQAPEKSIVFTRTKKEADELHQFLISKNYKSTALHGDMDQRDRRASIMAFKKNDADVLVA 315 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+A+RGLDI + HV NY LP E Y+HRIGRTGRA G A++LV E+K L ++ Sbjct: 316 TDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITLVTPLEYKELLRMQ 375 Query: 362 KLLKKEIPRIAIPGYEPDPSIKA 384 K + EI IP + IK Sbjct: 376 KEIDSEIELFEIPTINENQIIKT 398 >UniRef50_B5ZLE2 DEAD/DEAH box helicase domain protein n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZLE2_GLUDA Length = 390 Score = 311 bits (796), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 171/364 (46%), Positives = 223/364 (61%), Gaps = 3/364 (0%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD+LGL P I+ VA GY P+PIQ AIP + +GRD+ A A+TGTGKTA F LP++ Sbjct: 15 AFDTLGLDPRIVANVARAGYATPSPIQALAIPPIRDGRDVEALARTGTGKTAAFALPVIH 74 Query: 62 HLITRQPHAKGRRP---VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 L+T A P VRALIL+PTRELA+Q VR + + + GG + Q Sbjct: 75 RLLTGAGGAAPSGPPGAVRALILSPTRELASQTAGTVRTCIRGCGLTVALAIGGAPKDRQ 134 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L GVD+LVATPGRLLD + LD LVLDEADRMLD+GF+ D+R + +LP Sbjct: 135 ARALLDGVDILVATPGRLLDHLADATITLDHTTCLVLDEADRMLDLGFVEDVRAIAARLP 194 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 + Q LLFSAT S I AL +LLH PL+I + ++ Q V F RK L Sbjct: 195 VRHQTLLFSATMSPAISALGRQLLHKPLQIAPPEQAAPPPRIRQQVIFTPAARKAASLLA 254 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + + +VFTRTK A+ LA LN G+ +AA+HG+ Q R R L DF+ G + V Sbjct: 255 VLRREAGGRTMVFTRTKQAADALARTLNTGGVTAAALHGDHGQVRRDRTLDDFRRGRLLV 314 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+ ARG+D+E++ VVN+++P PE Y+HRIGRT RA G ALSL E LR Sbjct: 315 LVATDVMARGIDVEDVALVVNFDIPEQPETYIHRIGRTARAGRRGTALSLCDPAERLKLR 374 Query: 359 DIEK 362 DIE+ Sbjct: 375 DIER 378 >UniRef50_A6M3F5 DEAD/DEAH box helicase domain protein n=5 Tax=Clostridium RepID=A6M3F5_CLOB8 Length = 525 Score = 311 bits (796), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 159/377 (42%), Positives = 236/377 (62%), Gaps = 9/377 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +LGL I++A+++ G+ +P+ IQ+Q+IP L G DL+ AQTGTGKTA ++LP+ Sbjct: 6 FATLGLKESIVKAISDLGFTKPSQIQEQSIPVTLSGADLIGQAQTGTGKTAAYSLPI--- 62 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 IT+ +G +++LIL PTRELA Q+ E ++ SKY I +L V+GG SI+ Q+ L Sbjct: 63 -ITKMSDNRG---IKSLILAPTRELAVQVNEEIQRLSKYEKIVTLAVYGGDSIDRQIRAL 118 Query: 123 R-GGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 R G VD++V TPGR+LDL + + L+ +E LVLDEAD ML+MGFI DI+ +L+ P++R Sbjct: 119 RKGDVDIVVGTPGRILDLVKRKCLHLESIEFLVLDEADEMLNMGFIDDIQEILSHTPSER 178 Query: 182 QNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT D I LA+K + + + + R + ++ Q ++ K + E L ++ Sbjct: 179 QTLLFSATMPDPIAKLAKKYMKPDAKLVSIKRSSLTVSKIEQSYFMINNKHRLEALCRLL 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 N ++F RTK G + L ++L G +HG+ +Q R L FK G + +L+ Sbjct: 239 DLDNPSSAIIFCRTKRGVDELVQELQSKGYMVEGMHGDMTQAHRLTTLNKFKEGTLNLLI 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+D+E + HV NY+LP E YVHRIGRTGRA +G A SLV + +L+ I Sbjct: 299 ATDVAARGIDVEGVTHVFNYDLPQDVESYVHRIGRTGRANKSGTAYSLVTPKDFSMLKQI 358 Query: 361 EKLLKKEIPRIAIPGYE 377 + + K I + +P E Sbjct: 359 QNVTKSSITQKPVPTAE 375 >UniRef50_Q1MY97 DEAD/DEAH box helicase-like protein n=1 Tax=Bermanella marisrubri RepID=Q1MY97_9GAMM Length = 614 Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 163/373 (43%), Positives = 233/373 (62%), Gaps = 7/373 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F SLGL ++LRA+ EQGY +P+PIQ+Q+IP +LEG+D++ AQTGTGKTA FTLPLL Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLA- 66 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKY-LNIRSLVVFGGVSINPQMMK 121 + + R P + L+L PTRELA Q+ V YSK+ N++ ++GG Q Sbjct: 67 ----RTQNEVREP-QVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRA 121 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G +V TPGR++D + +KL+ + +VLDEAD ML MGFI D+ VL ++P KR Sbjct: 122 LKQGPQWVVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVPEKR 181 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT IKA+AEK L P EI + + ++ + Q V K + L + Sbjct: 182 QIALFSATMPKQIKAVAEKHLREPTEIRIKSKTATNESIEQKYWLVKGVDKNQALLRICE 241 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + ++VF RTK +A+ + G+R A++G+ +Q R RA+ K G + +LVA Sbjct: 242 TSEFDAMMVFVRTKQATEEVADYMRSHGLRCEALNGDVAQAQRERAVDRLKKGQVDMLVA 301 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + HVVNY++P E YVHRIGRTGRA +GEA+ V E ++L IE Sbjct: 302 TDVAARGLDVERISHVVNYDIPYDAESYVHRIGRTGRAGRSGEAILFVRPRERRMLSTIE 361 Query: 362 KLLKKEIPRIAIP 374 ++ +K+I +I +P Sbjct: 362 RVTRKKIQQIELP 374 >UniRef50_Q3SF48 DEAD/DEAH box helicase n=7 Tax=cellular organisms RepID=Q3SF48_THIDA Length = 533 Score = 309 bits (791), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 176/402 (43%), Positives = 236/402 (58%), Gaps = 5/402 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF LGL P IL++V GY TP+QQQAIPA L G DL+ S+ TG+GKTA F LP + Sbjct: 1 MSFSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSGKTAAFLLPSI 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 Q L+ +P K P R L+LTPTRELA Q+ + Y K + R+ + GG Q+ Sbjct: 61 QRLLA-EPAVKSIGP-RVLVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGGAPYGLQL 118 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 +L VDV+VATPGRL+D + + ++E+LVLDEADRMLDMGF+ DI+ + + PA Sbjct: 119 KRLSQPVDVVVATPGRLIDHLERGKIDFSRLEVLVLDEADRMLDMGFVDDIKAIAARCPA 178 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLSH 238 +RQ LLFSAT + LA +L + IE+ ++ Q + F D K LL Sbjct: 179 ERQTLLFSATLDGVVGNLARELTRDAQRIEIEAVPHKEAKIEQRLLFADNMDHKNRLLDA 238 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ Q +VF TK +++ L + G S A+HG+ QG R RAL + G RV Sbjct: 239 LLRDVEMVQAIVFASTKRSTEEISDLLAESGFASDALHGDMQQGQRNRALQRLREGRTRV 298 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARG+D+ + HV+N++LP EDYVHRIGRTGRA TG A+S + E L++ Sbjct: 299 LVATDVAARGIDVASISHVINFDLPRQAEDYVHRIGRTGRAGRTGIAVSFAGMREGGLVK 358 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRG 400 +IE+ I +PG EP NGR RG G RG Sbjct: 359 NIERYTGNRIEVHTLPGLEPTQRPSTGRPGNGR-PRGNGPRG 399 >UniRef50_A9ENG9 ATP-independent RNA helicase n=18 Tax=Bacteria RepID=A9ENG9_SORC5 Length = 624 Score = 308 bits (789), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 168/377 (44%), Positives = 232/377 (61%), Gaps = 8/377 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF +LG++P +L +AE GY EPTPIQ++AIP +L GRDL+ A TGTGKTA F LPLLQ Sbjct: 9 SFAALGIAPALLGVLAELGYEEPTPIQREAIPHLLTGRDLLGQAATGTGKTAAFALPLLQ 68 Query: 62 HL-ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L I +P R AL+L PTRELA Q+ E + Y + L ++ L V+GG Q+ Sbjct: 69 RLEIGGEPP----RLPEALVLVPTRELAMQVAEAMHRYGRRLGVQVLSVYGGQPFGQQLR 124 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR GV V+VATPGR LD + + LD + +VLDEAD MLDMGF + +L+ P Sbjct: 125 ALRRGVHVVVATPGRTLDHIGRGTLALDGIRTVVLDEADEMLDMGFAEALEEILSATPGA 184 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQ---VTQHVHFVDKKRKRELLS 237 RQ +LFSAT I A+A + L P+ +++A A + V Q + V + K L+ Sbjct: 185 RQTVLFSATLPPRIAAIAGRHLREPVRVKIAGEKAAPGELPRVRQTAYIVPRAHKSAALT 244 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++ + ++F RT++ + L E L G + A+HG SQ R R +A F++G Sbjct: 245 RVLDMEDPSSAILFCRTRNEVDELTEALRARGYEAQALHGGFSQEHRDRVMARFRAGTAE 304 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVATD+AARGLDIE + HV+NY++P PE YVHRIGRTGRA G A++LV EH L+ Sbjct: 305 LLVATDVAARGLDIEHVSHVINYDVPCAPEVYVHRIGRTGRAGREGAAITLVEPREHYLI 364 Query: 358 RDIEKLLKKEIPRIAIP 374 R++E+L + I +P Sbjct: 365 RNVERLTGQRIEAATLP 381 >UniRef50_C8W8S2 DEAD/DEAH box helicase domain protein n=2 Tax=Atopobium RepID=C8W8S2_ATOPD Length = 450 Score = 307 bits (787), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 170/406 (41%), Positives = 240/406 (59%), Gaps = 31/406 (7%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F LGL+ IL V G+ PTP+Q AIPAVL G+D++ASAQTGTGKTA F LP L Sbjct: 3 ITFAELGLNEQILAGVTTLGFSVPTPVQTAAIPAVLAGKDVVASAQTGTGKTAAFMLPTL 62 Query: 61 QHLITRQPHAKGRRP----------------------------VRALILTPTRELAAQIG 92 Q I + H K +P RALI+TPTRELAAQI Sbjct: 63 QR-IAVEKHDKAEKPDGKRNAAAERNAVAERNAKRGTGKRNAYPRALIVTPTRELAAQID 121 Query: 93 ENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEI 152 + ++++V GG Q+ L+ G DVLVATPGRL+DL + L+ +++ Sbjct: 122 NVAKSVCASTGQQAVIVTGGAHYKHQIAALQKGCDVLVATPGRLIDLLDKKHTSLEDIQV 181 Query: 153 LVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVAR 212 LVLDEADRMLDMGF + R++ +LP Q LLFSAT I + + LL +P IE+AR Sbjct: 182 LVLDEADRMLDMGFWPSVHRIMEQLPKAHQTLLFSATLPASITSTIDALLKDPERIEIAR 241 Query: 213 RNTASDQVTQHVHFVDKKRKRELLSHMIGKGN--WQQVLVFTRTKHGANHLAEQLNKDGI 270 + + QH+ V + +K +LL +I + ++VLVF RTK + + + L G+ Sbjct: 242 TGQTAATIEQHLCSVTQGQKPQLLKALIDSFDPAPERVLVFCRTKSRVDSIYKNLKAAGL 301 Query: 271 RSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYV 330 + +H ++ Q AR +AL F+S I++LVATD+ +RG+DI+ + V+N+++P PEDYV Sbjct: 302 KVDVMHADRPQKARAKALDRFRSASIQILVATDVMSRGIDIQGIDVVINFDVPLDPEDYV 361 Query: 331 HRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGY 376 HRIGRTGRA ATG+A + + DE LR+IE K +P +PG+ Sbjct: 362 HRIGRTGRAGATGQAYTFMGPDEVTPLREIEYFTKALVPAWDLPGF 407 >UniRef50_C7PCT4 DEAD/DEAH box helicase domain protein n=20 Tax=Bacteria RepID=C7PCT4_CHIPD Length = 444 Score = 307 bits (787), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 164/409 (40%), Positives = 243/409 (59%), Gaps = 13/409 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M FD L +L + GY TP+Q++ IP ++ G+D++A AQTGTGKTA F LP+L Sbjct: 1 MYFDEFDLDDRVLDGIDAMGYTTATPVQEKVIPPIIAGKDILACAQTGTGKTAAFLLPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVS---INP 117 LIT +PH R + +LI+ PTRELA QI + + S + ++ S+ V+GG + Sbjct: 61 HRLIT-EPH--DARKINSLIIVPTRELAVQIAQTLEGMSYFTSVSSIAVYGGSNGALFAA 117 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 + L GVD+++ TPGR++ + VKLD V+ LVLDEADRMLDMGF DI R+ + L Sbjct: 118 EKKALTSGVDIVICTPGRMIAHLNMGYVKLDAVKYLVLDEADRMLDMGFSDDIIRITSTL 177 Query: 178 PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 P +RQNLLFSAT D I+ LA K+LH P EI +A + +++ Q V +++K L+ Sbjct: 178 PKERQNLLFSATMPDKIRKLALKILHQPEEINIAI-SKPPEKIVQEAFVVFEEQKTGLIK 236 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++ + + +++F K L +L K IH + Q R + L DFK+ ++ Sbjct: 237 QLLARKEFGCIIIFCSRKQNVKQLTYELKKARFSVEEIHSDLEQDKREQVLMDFKNKKLK 296 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVATDI +RG+DIE++ V+NY++PN EDY+HRIGRT RAA G A +++ E + Sbjct: 297 MLVATDILSRGIDIEDIDLVINYDVPNDAEDYIHRIGRTARAATDGTAYTIISEKEQRKF 356 Query: 358 RDIEKLLKKEIPRIAIP-GYEPDPSIKAEPIQNGRQQRGGGGRGQGGGR 405 IE++L K + + +P P P +P ++ GGG R QG R Sbjct: 357 ARIEEVLGKPVTKAEVPAALGPVPEYSPKPFRS-----GGGKRPQGKKR 400 >UniRef50_A0Z0M4 ATP-dependent RNA helicase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z0M4_9GAMM Length = 582 Score = 306 bits (785), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 167/374 (44%), Positives = 235/374 (62%), Gaps = 9/374 (2%) Query: 3 FDSLGLSPDILRA-VAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 F+SLGL PD L+ + GY TPIQ IP +LEGRD++ AQTGTGKTA F LP+L Sbjct: 11 FNSLGL-PDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILA 69 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMM 120 ++ K R P +AL+L PTRELA Q+ E R Y + + +R L +FGG + Q+ Sbjct: 70 NI-----DVKVRSP-QALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLK 123 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR G ++VATPGRLLD + ++ L + +VLDEAD ML MGFI D+ +L K P + Sbjct: 124 SLREGTHIVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFIDDVDTILAKTPKE 183 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 R+ LFSAT ++ +A K L NP EI VA T ++ + Q K E L ++ Sbjct: 184 RKVALFSATMPKRVRDIANKHLSNPAEISVAAAATTNENIEQCYWLAKGASKLEALKRLL 243 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + V+VFTRT+ +AEQL + G++++ ++G+ Q R R ++D KSG + VLV Sbjct: 244 AFEDTEGVIVFTRTRESTTVIAEQLRQTGLKASPLNGDMDQKMRLRTVSDLKSGALDVLV 303 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD+E + HV+NY++P E YVHRIGRTGRA G+A+ V E ++LR+I Sbjct: 304 ATDVAARGLDVERITHVINYDVPFDEEAYVHRIGRTGRAGRKGKAILFVVPRERRMLRNI 363 Query: 361 EKLLKKEIPRIAIP 374 E+L ++ IP I +P Sbjct: 364 ERLTRQSIPEIKLP 377 >UniRef50_C1D891 Putative ATP-dependent RNA helicase protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D891_LARHH Length = 520 Score = 306 bits (784), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 186/462 (40%), Positives = 265/462 (57%), Gaps = 25/462 (5%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F +LGL ++ A+ + PTP+Q +A+P +L GRDLMASAQTGTGKTA F LP L Sbjct: 5 AFAALGLDARLVHALEQHNITTPTPVQAEALPLLLSGRDLMASAQTGTGKTAAFLLPALS 64 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYS-KYLNIRSLVVFGGVSINPQMM 120 L+ +P A+ R P R L+L PTREL Q+ + +++S K + V GG S Q Sbjct: 65 RLLV-EPVARSRGP-RILVLAPTRELVQQVAKAAQEFSTKIPRVNVASVIGGTSFRTQNQ 122 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L ++V+VATPGRL+D + ++E+LVLDEADRMLDMGF D+ + ++LP Sbjct: 123 MLTRPIEVMVATPGRLMDQMRSGRIDFSRLEMLVLDEADRMLDMGFSEDVMEIASQLPKA 182 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLSHM 239 RQ F+AT + + A++LL P +IE+A + + + Q FVD KR L+ H+ Sbjct: 183 RQTAFFTATMTRRVLDFADELLTEPAKIEIAAQTAKHENIEQQAIFVDDIDHKRRLVRHI 242 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + + +Q +VF TK + LA++L DGIR+ A+HG+ Q RTR L +SG VL Sbjct: 243 LSQPDVKQAIVFVATKRDCDTLADELIVDGIRADALHGDMQQRDRTRTLTRLRSGQTEVL 302 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+ + HV+N++LP EDYVHR+GRTGRA ATG A+SLV + L+ Sbjct: 303 VATDVAARGIDVAGISHVINFDLPRFAEDYVHRVGRTGRAGATGTAVSLVGRQDAFPLKK 362 Query: 360 IEKLLKKEIPRIAIPG----YEPDPSIKAEPIQNGRQQRGGGGRGQG-----------GG 404 IE+ +++ I G ++P + + G + G GQG GG Sbjct: 363 IERFTGQKLIVTEIEGMIARFKPQERREGGGGRGGFGGKPRHGNGQGRSYGDRSSAPRGG 422 Query: 405 RGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRR 446 G Q RR EGG P R+ GDA +G + RR Sbjct: 423 FGGHQQRR-EGGDDRRQFAP-----RQDGDAHRSGTARDGRR 458 >UniRef50_A8PM28 Dead/deah box helicase n=1 Tax=Rickettsiella grylli RepID=A8PM28_9COXI Length = 421 Score = 305 bits (781), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 171/397 (43%), Positives = 242/397 (60%), Gaps = 10/397 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F + IL + QGYR TPIQ +AIPA+L+GRD++ AQTGTGKTA + LPLL Sbjct: 1 MNFTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQTGTGKTAAYALPLL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGG-VSINPQM 119 Q L P G+ +RALIL+PTR+LA QI + + + ++R ++GG ++ Q Sbjct: 61 QQLTEGPP---GQ--LRALILSPTRDLADQICVAMNHFGRQTHLRCATIYGGKINYTRQY 115 Query: 120 MKLRGGVDVLVATPGRLLDL-EHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L GGVD++VA PGRLLDL + + L QV+ LVLDEAD + D GF I +L LP Sbjct: 116 QLLTGGVDIIVACPGRLLDLLQGKKNNFLQQVKHLVLDEADHLFDHGFRDAIYHILKHLP 175 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 +RQNLLFSAT S DI+ L +K+LH P+ I++ A +TQ + V + K LL Sbjct: 176 PRRQNLLFSATMSADIRLLIDKVLHRPVRIQIGEPKPAVT-ITQTLFPVSETLKVNLLET 234 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + ++FTRTKH A LAE L G ++ + GN SQ R AL F+ G+++ Sbjct: 235 ILQNHSIHSAIIFTRTKHRAQCLAEHLRDLGYKATSFQGNLSQSRRKTALGKFRQGELKF 294 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARG+DI+ L HV+N+++PN +Y HRIGRTGRA G A SL+ ++ + ++ Sbjct: 295 LVATDVAARGIDIDHLSHVINFDMPNTAIEYTHRIGRTGRADKLGMAFSLITKNDRRKIQ 354 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIK--AEPIQNGRQQ 393 IE L KK + I ++ I EP+ R++ Sbjct: 355 SIEHLQKKRLEECIIAEFDYHAKINPSMEPLNAYRRK 391 >UniRef50_Q4FSS4 Possible ATP-dependent DEAD/DEAH box RNA-helicase n=5 Tax=Proteobacteria RepID=Q4FSS4_PSYA2 Length = 567 Score = 304 bits (779), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 163/380 (42%), Positives = 229/380 (60%), Gaps = 8/380 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F L ++ IL A+ GY PTPIQ +AIP L+GRDL+ SAQTG+GKTA F +P+L Sbjct: 44 VTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFVIPVL 103 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 L K +ALILTPTRELA Q+ ++VR YSK + + + + GG N Q+ Sbjct: 104 DRLSRATSFDK---LTKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQI 160 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ GV V+VATPGRLLD + V L +EILVLDEADRMLDMGF DI +L P Sbjct: 161 TALKKGVQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADDISDILRAAPI 220 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLSH 238 RQ ++ SAT+ + +A NP + + S + + V++ D K LL Sbjct: 221 DRQTIMCSATWDGPVGKIAASFTKNPERVSI---KVESAHIEEKVYYCDDFDHKNRLLDK 277 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + +Q+++F TK LA+QL + G +++ +HG+ Q R R + D ++G ++ Sbjct: 278 IVCHKDMEQIIIFAATKRSTEKLAKQLQEAGHKASFLHGDLPQSKRNRIVQDLRNGKCKI 337 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLD+ L HV+NY+LP EDYVHRIGR GRA TG A+SL +D+ L Sbjct: 338 LVATDVAARGLDVPALSHVINYDLPRQTEDYVHRIGRCGRAGRTGVAISLCSMDDRPQLN 397 Query: 359 DIEKLLKKEIPRIAIPGYEP 378 I + L +++ I G EP Sbjct: 398 AINRYLDRKMEASVIEGMEP 417 >UniRef50_A6DHU9 DEAD/DEAH box helicase-like protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHU9_9BACT Length = 412 Score = 304 bits (779), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 154/352 (43%), Positives = 231/352 (65%), Gaps = 5/352 (1%) Query: 1 MSFDSLGLSPDIL-RAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPL 59 MSF+ L PD L RAV + E T IQ +AIP + EG+DL+A +QTGTGKT F+ PL Sbjct: 1 MSFEQLNF-PDYLSRAVDNLNFSEATDIQAKAIPLIQEGKDLLAESQTGTGKTLAFSFPL 59 Query: 60 LQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL--NIRSLVVFGGVSINP 117 ++ + T P K + + L+L PTRELA Q+ + +Y+++ I++ + GG +I+ Sbjct: 60 IERINTLPPKKK-KISILGLVLVPTRELALQVEKAFTNYAEFSLRPIKTATLIGGENIDG 118 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 Q+ KLR G+DVL+ATPGR+++L + V+L ++E+L+LDEAD+MLD+GF +++ +L L Sbjct: 119 QIRKLRMGLDVLIATPGRIIELINLGEVRLVELEMLILDEADKMLDLGFADELKELLEAL 178 Query: 178 PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 P KRQNLLFSAT ++ LAE+ L+ +E+ ++R D + Q V VD +R++L Sbjct: 179 PKKRQNLLFSATLPQKVQQLAEEFLNAAVELRISRDQITGDNIEQRVIEVDANLRRQVLQ 238 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + W+ ++F +K A +LA +L K GI++ HG+ +Q R + L F++ D Sbjct: 239 KLFKDEQWKHTIIFVSSKRSAFNLANKLKKAGIQAQDFHGDLTQDERIKVLKRFQNKDFP 298 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLV 349 +L+ATDIAARG+DI +L HV+NY+LP P DYVHRIGRTGRA G A+S + Sbjct: 299 ILIATDIAARGIDISKLSHVINYDLPRSPMDYVHRIGRTGRAGQKGVAISFI 350 >UniRef50_A3I1F5 DEAD/DEAH box helicase-like protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I1F5_9SPHI Length = 399 Score = 304 bits (778), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 153/349 (43%), Positives = 230/349 (65%), Gaps = 7/349 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF SL L ++R ++E+GY T IQ+Q+I A+LEGRDL+ + TG+GKT F +P+++ Sbjct: 56 SFASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPIIE 115 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H + K ALI+TPTRELA QI + + SK + + S GG +IN M Sbjct: 116 HAL------KNPGQFTALIVTPTRELALQIDQEFKSLSKGMRLHSATFIGGTNINTDMKV 169 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L + V+V TPGRLLDL ++ +KL+QV+ LVLDE DRMLDMGF++D+++++ + + Sbjct: 170 LSRKLHVIVGTPGRLLDLTNRKLLKLNQVKTLVLDEFDRMLDMGFVNDVKKLVGGMTQRE 229 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFV-DKKRKRELLSHMI 240 Q +LFSAT + K L + LL NP+E+++ + ++ + Q + V + K K +L+ + Sbjct: 230 QTMLFSATLEPNQKNLIQSLLKNPVEVKINTGVSTNENIEQGIIRVPEGKDKFGMLADLF 289 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 +V+VFT TK A+ L+++LN+ G++S IHGNKSQ R + + FKSG+ RVLV Sbjct: 290 QNRAMDKVIVFTETKRLADRLSKKLNQAGVKSGLIHGNKSQNFRNKTIEQFKSGETRVLV 349 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLV 349 ATD+AARG+D+ ++ HV+NY+LP + Y+HRIGRTGRA TG A++ V Sbjct: 350 ATDVAARGIDVADVSHVINYQLPMTMDSYIHRIGRTGRAGKTGHAITFV 398 >UniRef50_A8ETV2 Putative ATP-dependent RNA helicase RhlE n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ETV2_ARCB4 Length = 351 Score = 303 bits (777), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 150/299 (50%), Positives = 204/299 (68%) Query: 79 LILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLD 138 +IL PTRELA QIG+ + DY+KYL+I+ L +FGGVS Q KL G+D+LV+T GRLL+ Sbjct: 1 MILVPTRELATQIGKVIDDYAKYLDIKRLAIFGGVSSKEQEKKLSNGIDILVSTSGRLLE 60 Query: 139 LEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALA 198 V L V +V+DE D MLDMGF+ D+ ++L + RQ ++FSAT + ++K LA Sbjct: 61 HIKNKNVNLSSVTTVVIDEVDTMLDMGFLEDLEKILPNIGQNRQIMMFSATLNQNVKKLA 120 Query: 199 EKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGA 258 ++ L +P+ IEVA++ ++ + Q + VD+ +K ELLS++IG N+ QVLVF K A Sbjct: 121 KEFLSDPVVIEVAKQRSSVKIIDQQIVLVDEDKKAELLSYLIGSRNYSQVLVFVNMKKEA 180 Query: 259 NHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVV 318 + L LN DG+ + IHG+ Q AR +AL FKSGDIRVLVATDIAARG+DIE LP VV Sbjct: 181 DDLVAHLNLDGLPAECIHGDIRQTARAKALRKFKSGDIRVLVATDIAARGIDIELLPVVV 240 Query: 319 NYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYE 377 N+ LP DY HRIGRTGRA G A++L+ V ++K + +IEK L IPRI + G+E Sbjct: 241 NFALPETITDYTHRIGRTGRAGNAGTAITLLSVKDYKFMIEIEKELIINIPRIEVEGFE 299 >UniRef50_B9Y818 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y818_9FIRM Length = 556 Score = 303 bits (775), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 153/378 (40%), Positives = 232/378 (61%), Gaps = 6/378 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+ L LSP++ RA+A+ GY E T IQ IP V+ G D++ +QTGTGKTA F +P++ Sbjct: 1 MKFNELNLSPEMSRAIADCGYTEATYIQSACIPVVMNGGDVIGQSQTGTGKTAAFAIPII 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 + L R+ +ALIL+PTRELA Q+ + +R ++KY IR++ V+GG I+ Q+ Sbjct: 61 EML-----EVTDRKRPQALILSPTRELAMQVCDEIRKFTKYKEGIRTVAVYGGQQISKQI 115 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 ++L+ G D++V TPGR+LD + ++ DQ +LVLDEAD ML+MGF DI V+ LP Sbjct: 116 LELKKGADIVVGTPGRVLDHIRRRTLRFDQCRVLVLDEADEMLNMGFREDIETVIEALPQ 175 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ +LFSAT I + + NP+ I+ + + ++ Q + K+ K+E+L + Sbjct: 176 QRQTVLFSATMPKPILEITSQYQTNPVHIKTPQTQINTPKIEQVYYVCPKEAKKEILMQL 235 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I N ++F TK + L L G +AA+HG+ Q RT + +FK G I +L Sbjct: 236 ISMQNPHLAMIFCNTKKMVDELTSDLVSKGYPAAALHGDMKQEMRTGVMDNFKKGKINIL 295 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D++ + V NY+LP E YVHRIGRTGRA G A++L+ + LRD Sbjct: 296 VATDVAARGIDVDSMDVVFNYDLPQESEYYVHRIGRTGRAGKEGLAVTLITARQKYALRD 355 Query: 360 IEKLLKKEIPRIAIPGYE 377 +E+ + ++ + +P E Sbjct: 356 LERTTRSKLTQKPLPSLE 373 >UniRef50_C8PWG8 Cold-shock DEAD box protein A homolog n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWG8_9GAMM Length = 777 Score = 302 bits (774), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 166/391 (42%), Positives = 237/391 (60%), Gaps = 18/391 (4%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +LGLS +L+++ GY PTPIQ +AIPA LEGRDL+ SAQTG+GKTA F LP+L Sbjct: 71 FTALGLSGSLLKSIVATGYTTPTPIQARAIPAALEGRDLLLSAQTGSGKTAAFVLPILHQ 130 Query: 63 LITRQPH-------AKGRRP------VRALILTPTRELAAQIGENVRDY-SKYLNIRSLV 108 L Q A G+R V+ALILTPTRELA Q+ +++R Y S ++ S+ Sbjct: 131 LSELQAKEKAAEKTASGKRGRQQPKVVQALILTPTRELANQVQDSIRKYGSAMKDLYSVP 190 Query: 109 VFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIH 168 + GG + + Q+ L+ GV ++VATPGRLLD + V L + +LVLDEADRMLDMGF Sbjct: 191 LVGGAAYSGQIRALKKGVQIIVATPGRLLDHINAQRVNLSDLTMLVLDEADRMLDMGFAD 250 Query: 169 DIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVD 228 DI +L PA RQ ++ SAT+ + +AE +P I + + + + V+F D Sbjct: 251 DINAILEATPAHRQTIMSSATWDGPVGKIAESFTKDPERINI---KVETAHIDEKVYFCD 307 Query: 229 K-KRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRA 287 K +LL +I Q ++FT TK + +AE+L + ++ +HG+ Q R R Sbjct: 308 NFDHKNKLLEQLICDPERGQAIIFTATKRSSEEVAERLQQWDHKACYLHGDLPQSKRNRI 367 Query: 288 LADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALS 347 ++D +SG ++VATD+AARGLD+ + HV NY+LP EDYVHRIGR+GRA TG A++ Sbjct: 368 VSDLRSGKFDIVVATDVAARGLDLPNITHVFNYDLPRQVEDYVHRIGRSGRAGRTGIAIN 427 Query: 348 LVCVDEHKLLRDIEKLLKKEIPRIAIPGYEP 378 L D+ + +I + LK++I + G EP Sbjct: 428 LCSRDDRRQFGNIARYLKRDINEAQVEGLEP 458 >UniRef50_A0LLL9 DEAD/DEAH box helicase domain protein n=2 Tax=Deltaproteobacteria RepID=A0LLL9_SYNFM Length = 533 Score = 302 bits (774), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 176/409 (43%), Positives = 239/409 (58%), Gaps = 12/409 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L L ILR +A+ +R TPIQ +P L G D AQTGTGKTA F + +L Sbjct: 118 FHDLDLPAPILRGIADAEFRYCTPIQAALLPHTLNGLDAAGRAQTGTGKTAVFIITMLTQ 177 Query: 63 LITRQPHAKGRR--PVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + R P +GRR RAL+L PTRELA QI + S++ +S+ +FGG+ Q Sbjct: 178 FL-RNPAPEGRRKGTPRALVLAPTRELALQIEKETHLLSRHTPFKSVAIFGGMDYEKQKR 236 Query: 121 KLRGGV-DVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP- 178 +L G V D++VATPGRLLD + Q + L +VEILV+DEADRMLDMGFI D++R++ P Sbjct: 237 RLTGEVIDIVVATPGRLLDFKRQGDLHLSKVEILVIDEADRMLDMGFIPDVQRIIHYTPP 296 Query: 179 -AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 A+RQ +LFSAT + ++ A + NP+ +E+ A D V Q V K LL Sbjct: 297 KAQRQTMLFSATLTAEVTRFASQWTRNPVTVEIEPEQVAVDTVNQRVLITTIDEKFTLLF 356 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 +MI + N +V+VFT + A L E+L GI A + G Q R + L +F++G IR Sbjct: 357 NMITRQNLDRVIVFTNRRDQARRLTERLGSYGISCALLSGEVDQKKRVKTLEEFRNGKIR 416 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 VLVATD+AARGL +E + HV NY +P PEDYVHRIGRTGRA +G ++S D+ L+ Sbjct: 417 VLVATDVAARGLHVEAVSHVFNYNMPMDPEDYVHRIGRTGRAGTSGISVSFASEDDSFLI 476 Query: 358 RDIEKLLKKEI----PRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQG 402 +EK L EI P + P+P+ P+ R +R G RG+ Sbjct: 477 PALEKYLGHEIHCEHPDEDMLETLPEPT--HTPVAAERPRRSGPYRGRN 523 >UniRef50_D2QD85 DEAD/DEAH box helicase domain protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QD85_9SPHI Length = 643 Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 153/376 (40%), Positives = 236/376 (62%), Gaps = 7/376 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F SL +SP++L+AV + G+ P+PIQ +AIP +L+GRD++ AQTGTGKTA F +P L Sbjct: 33 FSSLAISPELLQAVTDMGFISPSPIQAEAIPPILDGRDVIGQAQTGTGKTAAFGIPAL-D 91 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMK 121 LI Q R V+ LIL PTRELA Q+ E ++ +KY IR ++GG SI Q+ Sbjct: 92 LIDVQD-----RSVQTLILCPTRELALQVAEEIKKLAKYKRGIRIEAIYGGDSIERQIRS 146 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV +++ TPGR++D +N +KL+ V++++LDEAD MLDMGF DI +L ++P +R Sbjct: 147 LKSGVHIVIGTPGRVMDHMERNTLKLNNVKMMILDEADEMLDMGFREDIESILEEMPEER 206 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q +LFSAT S I + +K +P+ ++V ++ + + Q V K K E++ +I Sbjct: 207 QTILFSATMSKPIMQITQKFQKDPVLVKVVKKELTNVNIEQVYFEVKSKAKVEVMCRLID 266 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + + +LVF TK + + E L G ++ +HG+ Q R ++ F++G +LVA Sbjct: 267 MYDLKLLLVFCNTKRKVDEIVEDLQIRGYQAEGLHGDLRQAQRNNVMSKFRAGTTNILVA 326 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARG+D++++ V+N+++P E YVHRIGRTGRA +G A S V DE R+I+ Sbjct: 327 TDVAARGIDVDDVDAVINFDIPLDEEYYVHRIGRTGRAGKSGRAFSFVGRDEKYRFREIQ 386 Query: 362 KLLKKEIPRIAIPGYE 377 K ++ + IP +E Sbjct: 387 TYTKVKVEKGVIPSFE 402 >UniRef50_Q7MC00 DNA and RNA helicase n=57 Tax=Gammaproteobacteria RepID=Q7MC00_VIBVY Length = 436 Score = 302 bits (773), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 163/376 (43%), Positives = 234/376 (62%), Gaps = 9/376 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F +L LS +++ A+ + +++PT IQ AIP +L G+DL+A A TG+GKT + LPLL Sbjct: 25 MPFSTLSLSSELIHALPKD-FKKPTDIQALAIPELLAGQDLLALANTGSGKTLAYGLPLL 83 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L P K ALIL PTRELA Q+ E + + L + ++ + GGV Q+ Sbjct: 84 EKLRVN-PEQK------ALILVPTRELATQVSEAINQVGQALGLNAVCLCGGVDKEQQLQ 136 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L +LVAT GRL+DL + N + L + LVLDEADR+LDMGF D++ + + ++ Sbjct: 137 ALATNPHILVATTGRLVDLAN-NGLDLSNIHYLVLDEADRLLDMGFWPDVQNIAAQTSSQ 195 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +FSATFSD++K A+ L+ P ++ + N+ + + + ++ V+K K + L +I Sbjct: 196 RQTAMFSATFSDELKGKAKLLMQAPKQVAAHQENSTNQDIAETLYLVNKGSKTKALIELI 255 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 K W Q LVF K A+ LA++LNK GI + A+HG+KSQ R ALA FKSG +VL+ Sbjct: 256 QKNAWTQALVFIGAKENADGLAKKLNKAGISTNALHGDKSQAEREEALAQFKSGQTQVLI 315 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+ ARG+ IE+LP V+N+ELP E YVHR+GRT RA G ALSLVC E L I Sbjct: 316 ATDLLARGIHIEQLPVVINFELPMHAETYVHRVGRTARAGEQGVALSLVCHGEMDALSAI 375 Query: 361 EKLLKKEIPRIAIPGY 376 L ++E+P + G+ Sbjct: 376 RHLTQRELPVQDLEGF 391 >UniRef50_Q1N6E2 ATP-dependent RNA helicase n=1 Tax=Bermanella marisrubri RepID=Q1N6E2_9GAMM Length = 475 Score = 301 bits (772), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 160/369 (43%), Positives = 228/369 (61%), Gaps = 3/369 (0%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L I+R++ + G+ +PIQ +A+P L GRD++ AQTGTGKTA F + +LQ Sbjct: 100 FHDFNLDARIMRSIQDLGFSYASPIQAEALPYTLAGRDIIGKAQTGTGKTAAFLITVLQK 159 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 L+T +P + RALIL PTRELA QI ++ SKY ++ + V GGV + Q +L Sbjct: 160 LLTVKPEERFASEPRALILAPTRELAMQIAKDADGLSKYADLNIVTVLGGVDYDKQKEQL 219 Query: 123 RGGV-DVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK- 180 V DV+VATPGRLLD Q V LDQVE+LV+DEADRMLDMGFI D++R++ P K Sbjct: 220 ENEVVDVVVATPGRLLDYLQQGIVYLDQVEMLVIDEADRMLDMGFIPDLKRIIRGTPEKS 279 Query: 181 -RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ LFSAT+ D+ AL+E + P ++E+ + A++ V Q + + +K L Sbjct: 280 IRQTQLFSATYPYDVVALSESWTYKPEQVEIEPESVATETVKQQFISLQETQKDNALIEY 339 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + K N + ++F + LA++LNK G+++ + G +Q R + L FKS D VL Sbjct: 340 LEKENTGKSIIFANRRDTCRDLADRLNKRGVKALLLSGEVAQAKRMKTLDRFKSEDGAVL 399 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+A RG+ ++ + HV NY LP+ PEDYVHRIGRTGRA +G A++ + E L D Sbjct: 400 VATDVAGRGIHVDGITHVFNYNLPDDPEDYVHRIGRTGRAGESGTAITFIDEYEAYGLMD 459 Query: 360 IEKLLKKEI 368 +E L K++ Sbjct: 460 LESYLGKKV 468 >UniRef50_A4C1L2 ATP-dependent RNA helicase n=2 Tax=Polaribacter RepID=A4C1L2_9FLAO Length = 609 Score = 301 bits (772), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 158/375 (42%), Positives = 239/375 (63%), Gaps = 8/375 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGR-DLMASAQTGTGKTAGFTLPLL 60 +F LGL I +A+ + GY +PT IQ++AIP ++ R DL A AQTGTGKTA F+LP+L Sbjct: 3 TFLELGLKEPINKALTDLGYEQPTVIQEKAIPQIISSRSDLKAFAQTGTGKTAAFSLPIL 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 + L + + V+A+IL+PTRELA QIG N++D+ KYL +++ V+GG S+ Q+ Sbjct: 63 ELLDSNSGN------VQAIILSPTRELAVQIGNNIKDFCKYLPDVKVTTVYGGSSMEDQI 116 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ G ++V TPGR +DL + A+KL V+ LVLDEAD ML+MGF ++ +VL P Sbjct: 117 RSLKRGSQIVVGTPGRTVDLIKRRALKLGNVKWLVLDEADEMLNMGFKDELDKVLEATPD 176 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +Q LLFSATF +++++A+ + P+EI ++N +D V+ + V ++ + L + Sbjct: 177 TKQTLLFSATFPKEVESIAKNYMTKPVEITSGQKNQGADSVSHEYYSVTERTRYPALKRI 236 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 ++F RT+ +A+ L KDG + A+HG+ SQG R + F+ I++L Sbjct: 237 ADLNPDIYAIIFCRTRRETQEVADNLIKDGYSADALHGDLSQGQRDSVMGKFRKKTIQIL 296 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD+ EL HV+N++LP+ E+Y HR GRTGRA TG ++ LV E LR Sbjct: 297 VATDVAARGLDVTELTHVINHKLPDQIENYTHRSGRTGRAGNTGISIVLVNGKEKGKLRP 356 Query: 360 IEKLLKKEIPRIAIP 374 IEK+++K+ +P Sbjct: 357 IEKIIQKKFTEAKVP 371 >UniRef50_UPI0001C33831 DNA/RNA helicase, superfamily II n=3 Tax=Cyanobacteria RepID=UPI0001C33831 Length = 477 Score = 301 bits (771), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 158/376 (42%), Positives = 238/376 (63%), Gaps = 7/376 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF++LGLS + + E G+ PT IQ++AIP +LEG D++ +QTGTGKTA ++LP+L Sbjct: 3 ISFENLGLSETRVNKLKELGFENPTEIQEKAIPLMLEGHDVLGQSQTGTGKTAAYSLPIL 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + + P V+ LILTPTRELA Q+ E ++D++ + L V+GG SI+ Q+ Sbjct: 63 EKVDIQDPS------VQVLILTPTRELAQQVAEALKDFTVRRRLYILTVYGGQSIDRQIR 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GV ++V TPGR++DL + + LD + VLDEAD ML MGFI D++ +L K P Sbjct: 117 SLERGVQIVVGTPGRVIDLIERKKLILDSLRWAVLDEADEMLSMGFIDDVKTILKKTPES 176 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLSHM 239 R FSAT +I+ L + L +P+ I V R A ++ Q+++ V + KR+ L + Sbjct: 177 RSTACFSATMPREIRELVNQFLKSPVTISVERTQAAPTRIEQNIYMVPRGWSKRKALQPV 236 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + + ++F RTK A+ L +L + G HGN SQ R R + F+ G I+++ Sbjct: 237 LEIEDPESAIIFVRTKQTASDLTTRLQEIGHCVDEYHGNLSQSQRERLVHRFRDGRIKLV 296 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARGLD+E L HV+NY+LP+ E Y+HRIGRTGRA TG+A+S+V + +++R Sbjct: 297 VATDIAARGLDVEGLSHVINYDLPDNSETYIHRIGRTGRAGKTGKAISIVESADRRMIRQ 356 Query: 360 IEKLLKKEIPRIAIPG 375 IE+ L+++I IP Sbjct: 357 IERKLRQKIDICKIPN 372 >UniRef50_A6KZW9 ATP-dependent RNA helicase n=51 Tax=Bacteria RepID=A6KZW9_BACV8 Length = 624 Score = 300 bits (769), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 157/369 (42%), Positives = 233/369 (63%), Gaps = 8/369 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVL-EGRDLMASAQTGTGKTAGFTLPLL 60 +F+ LG+SP+IL+A+ E GY P P+Q++ IP +L G D++A AQTGTGKTA F LPL+ Sbjct: 3 TFEELGVSPEILKAIKEMGYENPMPVQEEVIPYLLGNGNDVVALAQTGTGKTAAFGLPLI 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 Q + K R P +ALIL PTREL QI ++ DYSKY++ ++ L V+GG SI Q+ Sbjct: 63 QKV-----DVKHRAP-QALILCPTRELCLQIAGDLNDYSKYIDGLKILPVYGGSSIESQI 116 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ GV ++VATPGRL+DL + KL+ + +V+DEAD ML+MGF I +L K+P Sbjct: 117 RMLKTGVHIIVATPGRLIDLIERKVAKLETITDVVMDEADEMLNMGFTDSINAILEKVPE 176 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 R L+FSAT S +I +A+K LH+ EI + +N S V + V K K L + Sbjct: 177 DRNTLMFSATMSPEISRIAKKYLHDAKEITIGTKNEGSKNVNHIAYLVHAKDKYAALKRI 236 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 ++F RT+ +A++L +DG + ++HG SQ R + F+ +++L Sbjct: 237 ADYYPQIYGIIFCRTRKETQEIADKLIQDGYNADSLHGELSQAQRDLVMQKFRQRHLQLL 296 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD+ +L HV+NY LP+ E Y HR GRTGRA TG +++++ + E +R+ Sbjct: 297 VATDVAARGLDVNDLTHVINYGLPDDIESYTHRSGRTGRAGKTGISIAIINLREKGKMRE 356 Query: 360 IEKLLKKEI 368 IE+++ K+ Sbjct: 357 IERIINKKF 365 >UniRef50_C6XHW2 ATP dependent RNA helicase protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHW2_LIBAP Length = 465 Score = 300 bits (767), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 160/372 (43%), Positives = 233/372 (62%), Gaps = 8/372 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F LGLSP ++ AV + GY +PTPIQ + IP VL+ D+ AQTGTGKTA F LP+L Sbjct: 1 MDFADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPML 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 I + A+ R P R LIL PTRELAAQ+ +N Y K N+ ++ GG+ Q Sbjct: 61 T--ILEKGRARVRMP-RTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNK 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL G DVL+ TPGR+LD ++ + ++ +EILV+DEADRMLDMGFI I+ + + +P Sbjct: 118 KLERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPFT 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVD----KKRKRELL 236 RQ LLFSAT +D+++ ++E L NP IEV ++ ++ + +H K+ L Sbjct: 178 RQTLLFSATMTDELQKVSENFLQNPKRIEVNTPSSTAETI-EHCFVATYAQYSKKCALLQ 236 Query: 237 SHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 + + + ++F K +L L K G AIHGN Q +R + L++FK G I Sbjct: 237 QLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTI 296 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 +++VA+D+AARGLDI ++ HV N+++PN E+Y+HRIGRTGRA G+A +LV ++ K Sbjct: 297 QLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDIKH 356 Query: 357 LRDIEKLLKKEI 368 + IEKL++K++ Sbjct: 357 IDAIEKLIEKKV 368 >UniRef50_Q3IJ60 ATP-dependent RNA helicase, cold shock protein A n=3 Tax=Alteromonadales RepID=Q3IJ60_PSEHT Length = 616 Score = 300 bits (767), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 158/377 (41%), Positives = 238/377 (63%), Gaps = 12/377 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+SL LSP IL+AV E GY+ P+ IQ Q IP +LE +D++ AQTGTGKTA F LPLL Sbjct: 5 VTFESLNLSPAILKAVEELGYKTPSEIQAQCIPLLLERKDVLGLAQTGTGKTAAFALPLL 64 Query: 61 QHL--ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINP 117 ++ +QP L+LTPTRELA Q+ E Y+K++ I L ++GG S + Sbjct: 65 NNIDPSVKQPQI--------LVLTPTRELAIQVAEAFEQYAKHVRGIEVLALYGGQSYSI 116 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 Q+ LR G V+VATPGRL+D ++ +K D ++ LVLDEAD ML MGFI D+ ++ K Sbjct: 117 QLSALRRGAQVIVATPGRLIDHINRGTIKFDALQALVLDEADEMLRMGFIDDVESIMEKT 176 Query: 178 PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 P ++Q LFSAT I+ ++ K ++NP ++ ++ RN+ V Q V + K + + Sbjct: 177 PREKQTCLFSATMPKQIQNISSKYMNNPEQVHISARNSTVSSVEQ-VFWNASIHKNKAIV 235 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + ++ +VF RT++ LAE L ++G +A ++G+ +Q AR R + KSG + Sbjct: 236 RFLEAEQYEGAIVFVRTRNDTVQLAELLEREGFSAAPLNGDMNQQARERTVERLKSGMLN 295 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 V++ATD+AARGLD++ L V+NY++P E YVHRIGRTGRA TG+A+ V +E LL Sbjct: 296 VVIATDVAARGLDVDRLSLVINYDIPQDSEAYVHRIGRTGRAGRTGKAILFVKHNERYLL 355 Query: 358 RDIEKLLKKEIPRIAIP 374 ++I + +I ++ +P Sbjct: 356 KNIIRHTNSDIAQVELP 372 >UniRef50_A6FEC9 ATP-dependent RNA helicase, DEAD box family n=1 Tax=Moritella sp. PE36 RepID=A6FEC9_9GAMM Length = 460 Score = 299 bits (766), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 176/464 (37%), Positives = 259/464 (55%), Gaps = 31/464 (6%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F G+ P ++ ++ G+ + T +Q+ AIP +L G D+MA++QTG+GKT + LP+L Sbjct: 1 MRFQDFGIDPRLISSIEHLGFEQATEVQEAAIPLILGGCDIMATSQTGSGKTIAYGLPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q ++ ++ R VRA+IL PTRELA Q+ N++ L+ + ++ G S Q Sbjct: 61 QRMLKQRRFE--HRAVRAVILAPTRELAIQVHANMKHLGMSLDYQIQLIIGRESFQHQEK 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP-A 179 LR +VL+ATPGRLLD + ++ L+ +E LVLDEADRMLDMGF D+ + P Sbjct: 119 LLRKNPEVLIATPGRLLDHIREKSISLEHLEFLVLDEADRMLDMGFRDDVSAISNSAPNV 178 Query: 180 KRQNLLFSATFSD-DIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLS 237 KRQ +LFSAT D+ + ++L P IE+ R N +++ Q + F D K E L Sbjct: 179 KRQTMLFSATLEHVDVANICNQVLRAPERIEINRSNDQHEKIEQRLFFSDNLTHKEEQLV 238 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 H++ +++Q+L+FT TK LA+ L + I + +IHG+ Q R R L DF+ G + Sbjct: 239 HLVKSEDYRQLLIFTATKLDTERLAKLLMDNDIDATSIHGDMLQNQRKRTLEDFRRGRVG 298 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 VLVATD+AARGLDI L HV+N++LP PED++HR GRTGRA ATG A+SLV + Sbjct: 299 VLVATDVAARGLDIRTLSHVINFDLPINPEDFIHRTGRTGRAGATGIAISLVSPKDWTSF 358 Query: 358 RDIEKLLKKEIPRIAIPGYE-------PDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQP 410 I+ LK ++P + G+E P P+ K P+ N GR + Sbjct: 359 GKIQSYLKVKLPCTMLEGFEAKFKGFKPKPAKKRLPVSN-------------KGRPAKLA 405 Query: 411 RRGEGGAKSASAKPAEKPSRRLG------DAKPAGEQQRRRRPR 448 R+G+ A A K ++ G A G +R+PR Sbjct: 406 RKGDKNAPKQKQNTAPKQDKKQGMRDSMASAVDGGFAPMKRKPR 449 >UniRef50_A6T3R2 ATP-dependent RNA helicase n=86 Tax=Bacteria RepID=A6T3R2_JANMA Length = 778 Score = 299 bits (765), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 158/376 (42%), Positives = 224/376 (59%), Gaps = 7/376 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L LS +LR + E GY P+PIQ IP +L RD++ AQTGTGKTA F LP+L Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMK 121 + +Q + AL+L PTRELA Q+ E + Y+ Y+ L ++GG S Q+ Sbjct: 69 IDIKQTTPQ------ALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSA 122 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GV V+V TPGR++D + ++ L +++ +VLDEAD ML MGFI D+ +L K P R Sbjct: 123 LRRGVHVVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTPESR 182 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT IK +A L +P I VA + +D + Q V +K + L+ ++ Sbjct: 183 QTALFSATMPSAIKRIATTYLRDPDLITVAAKTGTADNIRQRYWLVSGMQKLDALTRILE 242 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 N+ +++F RTK G LA +L G +AAI+G+ Q R R + K G I +LVA Sbjct: 243 AENFDGMIIFARTKLGTEELASKLQARGFSAAAINGDIQQQQRERTIQQLKDGKIDILVA 302 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + HV+NY++P+ PE Y HRIGRTGRA +GEA+ + E LL+ IE Sbjct: 303 TDVAARGLDVERISHVINYDVPHDPESYTHRIGRTGRAGRSGEAILFIAPRERNLLKAIE 362 Query: 362 KLLKKEIPRIAIPGYE 377 + ++ I + +P E Sbjct: 363 RATRQPISVLELPSVE 378 >UniRef50_D2LSA7 DEAD/DEAH box helicase domain protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSA7_BACS4 Length = 528 Score = 299 bits (765), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 156/377 (41%), Positives = 229/377 (60%), Gaps = 7/377 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+ +S DI +A+ + G+ P+PIQ++ IP +L+G D++ AQTGTGKTA F +PLL Sbjct: 2 MKFEDFQISNDIKKAIKDMGFEAPSPIQEKVIPEILKGHDVIGQAQTGTGKTAAFGIPLL 61 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + + R V++LILTPTRELA Q+ ++ SK+ + L ++GG SI Q+ Sbjct: 62 EKVTSD-------RQVQSLILTPTRELAIQVAGELQKLSKFKRSQILPIYGGQSIGHQIK 114 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GV V+V TPGR+LD ++ ++L V L+LDEAD MLDMGFI DI ++L ++ Sbjct: 115 ALKRGVQVVVGTPGRVLDHLNRKTLQLRSVHTLILDEADEMLDMGFIEDIEKILQQVNTN 174 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT I+ L+ K ++NP ++ +++ + + Q V +K K + L +I Sbjct: 175 RQTMLFSATMPPPIRKLSNKYMNNPKQVTISKGEVTAPSINQVYFKVLEKNKLDSLCRVI 234 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++F RTK G L E L G + +HG+ +Q R + F+ I L+ Sbjct: 235 DSETIDLGIIFCRTKKGVAELTEALQARGYMADGLHGDLTQSQRDIVMKKFRDSSIEFLI 294 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+D+E + HV+NY++P PE YVHRIGRTGRA G A++LV E K LR I Sbjct: 295 ATDVAARGIDVENVSHVINYDIPQDPESYVHRIGRTGRAGREGVAVTLVTPREMKHLRSI 354 Query: 361 EKLLKKEIPRIAIPGYE 377 E +K IP IP E Sbjct: 355 EAEIKMTIPSQRIPSVE 371 >UniRef50_D0WTV5 ATP-dependent RNA helicase, DEAD box family n=1 Tax=Vibrio alginolyticus 40B RepID=D0WTV5_VIBAL Length = 445 Score = 299 bits (765), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 162/377 (42%), Positives = 233/377 (61%), Gaps = 11/377 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F +L LS +++ A+ + +++PT IQ AIP +L G+DL+A A TG+GKT + LPLL Sbjct: 34 MPFSTLSLSSELIHALPKD-FKKPTDIQALAIPELLAGQDLLALANTGSGKTLAYGLPLL 92 Query: 61 QHLITRQPHAKGRRP-VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 + L G P +ALIL PTRELA Q+ E + + L + ++ + GGV Q Sbjct: 93 EKL--------GVNPEQKALILVPTRELAMQVSEAINQVGQVLELNAVCLCGGVDKEQQQ 144 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L +LVAT GRL+DL + N + L + LVLDEADR+LDMGF D++ + + Sbjct: 145 QALATNPHILVATTGRLVDLAN-NGLDLSNIHYLVLDEADRLLDMGFWPDVQNIAGLISN 203 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ +FSATFSD++K A+ L+ P ++ + N+ + + + ++ V+K K + L + Sbjct: 204 QRQTAMFSATFSDELKGKAKLLMQAPKQVAAHQENSTNQDIAETLYLVNKGSKTKALIEL 263 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I K W + LVF K A+ LA++LNK GI + A+HGNKSQ R ALA FKSG I+VL Sbjct: 264 IQKNAWTKALVFIGAKENADGLAKKLNKAGISTNALHGNKSQDEREEALAQFKSGQIQVL 323 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 +ATD+ ARG+ IE+LP V+N+ELP E YVHR+GRT RA G A+SLVC E L Sbjct: 324 IATDLLARGIHIEQLPVVINFELPMYAETYVHRVGRTARAGEQGVAMSLVCHGEMDALSA 383 Query: 360 IEKLLKKEIPRIAIPGY 376 I L ++ +P + G+ Sbjct: 384 IRHLTQRALPVQDLAGF 400 >UniRef50_Q725W5 ATP-dependent RNA helicase, DEAD/DEAH family n=3 Tax=Desulfovibrio vulgaris RepID=Q725W5_DESVH Length = 532 Score = 298 bits (763), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 166/374 (44%), Positives = 228/374 (60%), Gaps = 7/374 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF L L ++L+A+ E G+ EP+PIQ AIP +LEGRD++ AQTGTGKTA F LPLLQ Sbjct: 6 SFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQ 65 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 + R V+AL+L PTRELA Q+ + +K+L +R L V+GG I PQ Sbjct: 66 RI------DAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQAS 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR G V+V TPGR+LD ++ ++L V + VLDEAD MLDMGF DI R+L+++P Sbjct: 120 ALRRGAQVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMPEW 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q+ FSAT D I LA + L P + V RR Q V R+ + + + Sbjct: 180 VQSAFFSATMPDGILELARRFLREPELLRVTRRQLTVANTEQAWFEVRPFRRVDAVCRIF 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++ +VF TK G + LA L + GI + A+HG+ +Q R R ++ F++G I VLV Sbjct: 240 DAYIPRKAIVFRATKQGVDELAAALQQRGILADALHGDLNQTQRERVMSRFRAGGISVLV 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD++++ V+N++LPN PE YVHRIGRTGRA TG A S + LRDI Sbjct: 300 ATDVAARGLDVDDVDTVINFDLPNDPETYVHRIGRTGRAGRTGRAFSFAAGRDVYKLRDI 359 Query: 361 EKLLKKEIPRIAIP 374 +++ I R A+P Sbjct: 360 QRVTGSRIDRRAMP 373 >UniRef50_Q88NB7 ATP-dependent RNA helicase rhlB n=50 Tax=Gammaproteobacteria RepID=RHLB_PSEPK Length = 398 Score = 298 bits (763), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 164/388 (42%), Positives = 234/388 (60%), Gaps = 8/388 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LS +++ A+ + G+ TPIQ Q + L G+D + AQTGTGKTA F + ++ Sbjct: 11 FHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQ 70 Query: 63 LI-TRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L T P + RALI+ PTREL QI ++ +KY + + GG+ + Q+ Sbjct: 71 LQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMSFVGGMDFDKQLKA 130 Query: 122 LRG-GVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L D+LVATPGRLLD + V LD VE++VLDEADRMLDMGFI +R+++ + P K Sbjct: 131 LEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPK 190 Query: 181 --RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ LLFSATF+DD+ LA++ NP +E+ N AS+ V QHV+ V K +LL + Sbjct: 191 SERQTLLFSATFTDDVMNLAKQWTTNPAIVEIEPENVASETVEQHVYAVAGSDKYKLLYN 250 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + W++V+VF K + E+L +DGI +A + G+ Q R R L F+ G I V Sbjct: 251 LVTQNKWERVMVFANRKDEVRRIEEKLVRDGINAAQLSGDVPQHKRIRTLESFREGRITV 310 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+A RG+ I+ + HV+N+ LP P+DYVHRIGRTGRA +G ++S D+ L Sbjct: 311 LVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGTSGVSISFAGEDDSYQLP 370 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEP 386 IE LL ++I + +P PD +K P Sbjct: 371 AIEALLGRKI-KCEMP---PDELLKPVP 394 >UniRef50_Q81IT9 DEAD-box ATP-dependent RNA helicase cshA n=84 Tax=cellular organisms RepID=CSHA_BACCR Length = 533 Score = 298 bits (763), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 158/373 (42%), Positives = 228/373 (61%), Gaps = 6/373 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS +L++V G+ E TPIQ + IP L+G+D++ AQTGTGKTA F LPLL Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + T + +G +++ PTRELA Q+GE + K+ +R L ++GG IN Q+ Sbjct: 63 KVDTHKESVQG------IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRA 116 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ ++V TPGR+LD ++ ++L VE +VLDEAD ML+MGFI DI +LT +P Sbjct: 117 LKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT D I+ +AE+ + P I+V + + Q V +K+K ++L+ ++ Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLD 236 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + + +VF RTK + L+E LN G + IHG+ +Q R L FK G I VLVA Sbjct: 237 IQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVA 296 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLDI + HV N+++P PE YVHRIGRTGRA G A+ V E L++IE Sbjct: 297 TDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIE 356 Query: 362 KLLKKEIPRIAIP 374 + K+++ R+ P Sbjct: 357 RTTKRKMDRMDAP 369 >UniRef50_C8P265 DEAD/DEAH family ATP-dependent RNA helicase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P265_ERYRH Length = 594 Score = 297 bits (761), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 161/380 (42%), Positives = 227/380 (59%), Gaps = 10/380 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F L L +I+RAV E+GY EPT IQ QAIP +L DL+A +QTGTGKTA F LP+L Sbjct: 17 MTFKELELEEEIVRAVTEKGYEEPTDIQSQAIPILLGNHDLLAQSQTGTGKTAAFGLPML 76 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKY---LNIRSLVVFGGVSINP 117 QP K R +LIL PTREL Q+ E +R +SKY +NI V+GG I+ Sbjct: 77 S---LTQPGDKKR--TNSLILCPTRELCMQVAEEMRSFSKYKQGVNIAC--VYGGSPIDK 129 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 Q+ L+ G D++VATPGRL+D + ++LD +VLDEAD ML+MGFI DI + + L Sbjct: 130 QIRDLKRGADIVVATPGRLMDHIRRKTIRLDDCRHIVLDEADEMLNMGFIEDIEEIFSFL 189 Query: 178 PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 P +RQ FSAT +I L+EK L P I ++R N ++ Q + V+ + K +L Sbjct: 190 PEERQFAFFSATMPKEIVKLSEKFLVEPERITLSRNNLTVSRIKQIYYTVESRDKVDLTI 249 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++ ++F TK + L QLNK G + +HG+ Q R+ ++ FK G + Sbjct: 250 QLLQLHKTSGTMIFCNTKKMVDELTTQLNKAGFPALGLHGDMKQEMRSMVMSRFKKGMVS 309 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 VL+ATD+AARG+D++ + V+NY++P E YVHRIGRTGRA G A++LV + + Sbjct: 310 VLIATDVAARGIDVDSMDVVINYDIPQELEYYVHRIGRTGRAGKEGLAITLVSRRQRYAI 369 Query: 358 RDIEKLLKKEIPRIAIPGYE 377 + IE+L I +P E Sbjct: 370 KQIERLSNSTIVETPLPTKE 389 >UniRef50_A6GSW1 Putative ATP-dependent RNA helicase n=1 Tax=Limnobacter sp. MED105 RepID=A6GSW1_9BURK Length = 617 Score = 297 bits (761), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 163/390 (41%), Positives = 235/390 (60%), Gaps = 6/390 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSFD +GL+ +L+A+ PT +QQ+ +P +G DLM S+QTG+GKT GF LP++ Sbjct: 1 MSFDDMGLAAPLLQALNALNITAPTLVQQEVVPLGKDGGDLMVSSQTGSGKTFGFLLPVM 60 Query: 61 QHLIT--RQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINP 117 ++T + P P L+L PTRELA Q+ ++ + K+ +R V GG+ Sbjct: 61 HRMMTGEQSPMEMLAGP-ECLVLCPTRELAQQVSQDAINLVKFTKGVRVATVVGGMPYGK 119 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 QM LRG ++V TPGRLLDL Q + L V L++DEADRMLD+GF D+ + Sbjct: 120 QMASLRG-ARIVVGTPGRLLDLAQQGKLNLSTVTTLIVDEADRMLDLGFSEDLEAIDQLC 178 Query: 178 PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK-RKRELL 236 + Q L+FSATF+ I LAE +++NP IE+A +N A+ + Q + + D + KR+LL Sbjct: 179 GNRIQTLMFSATFAKRIIGLAENIMNNPKRIEMAAQNEANTDIAQKLMWADNRGHKRKLL 238 Query: 237 SHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 +H + + Q +VFT T+ A +LA L +G+R+ A+HG Q R R LA + GDI Sbjct: 239 NHWLEHPDMVQAVVFTSTQIDAENLARDLADEGVRACALHGGMPQVVRNRRLASVRKGDI 298 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 +VLVATD+AARGLD+ + HV+NY +P EDYVHRIGRTGRA +G A++L + Sbjct: 299 KVLVATDVAARGLDVPAISHVINYGMPMKSEDYVHRIGRTGRAGRSGVAVTLAEACDIIS 358 Query: 357 LRDIEKLLKKEIPRIAIPGYEPDPSIKAEP 386 +R IE+ + IP + G EP + P Sbjct: 359 VRGIERFINSRIPEEQVEGLEPRGNFTQAP 388 >UniRef50_Q3AFI3 ATP-dependent RNA helicase, DEAD box family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFI3_CARHZ Length = 430 Score = 297 bits (760), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 159/372 (42%), Positives = 233/372 (62%), Gaps = 7/372 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LGL +L+AV + G+ PTPIQ++AIP +LEG +L+ A TGTGKTA + LP+LQ Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + +G++ + LI+TPTRELA Q+ + V KYL +R+L V+GG +I Q+ L Sbjct: 64 I------QRGKK-AQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGL 116 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 R GV+V+V TPGR+LD + +++I++LDEAD MLDMGFI DI +L L ++Q Sbjct: 117 RQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQ 176 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 LLFSAT IK + +K L +++ R + Q + + + K E L ++ Sbjct: 177 TLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGLVSILNS 236 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 Q +VF RTK + + EQLN G + +HG+ SQ RT+ + FK+G +LVAT Sbjct: 237 ELPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVAT 296 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARGLDI ++ HV+N+++P PE Y+HRIGRTGRA G+A++L+ E KLL+ IE+ Sbjct: 297 DVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEE 356 Query: 363 LLKKEIPRIAIP 374 + K + R +P Sbjct: 357 AINKRLKREILP 368 >UniRef50_D1BSR4 DEAD/DEAH box helicase domain protein n=5 Tax=Actinomycetales RepID=D1BSR4_XYLCX Length = 712 Score = 297 bits (760), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 164/373 (43%), Positives = 229/373 (61%), Gaps = 4/373 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 FD+LGL + AVA+ G+ P+ IQ QAIPA+L GRD+ AQTGTGKTA F LPLL Sbjct: 51 FDTLGLPATLEAAVADLGFTTPSAIQAQAIPALLGGRDITGVAQTGTGKTAAFGLPLLAS 110 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMK 121 + + H R V+AL+LTPTRELA Q+ E + ++ +L ++R L V+GG PQ Sbjct: 111 V---EAHRGTRPTVQALVLTPTRELAMQVAEAIESFASHLPDVRVLSVYGGSPYVPQQRA 167 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GV V+V TPGR++D + + LD LVLDEAD ML MGF D+ ++ + P +R Sbjct: 168 LRDGVHVVVGTPGRVIDHLERGGLVLDDARFLVLDEADEMLRMGFAEDVEKIFSYAPTQR 227 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT I+A+A+ L++P+EI VAR+++ V Q V + K L+ ++ Sbjct: 228 QVALFSATMPPAIRAIADTHLNDPVEIAVARQSSTVASVHQGYAIVPFRHKVGALTRILA 287 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +VFTRT+ A + L + GI +A I G+ +Q R + + +SG + VLVA Sbjct: 288 TSDADASIVFTRTRSAAEEVGAALIEKGISAATISGDVAQKEREKIVERLRSGALDVLVA 347 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD++ + VVN+++P E YVHRIGRTGRA TG A+S V E L+ IE Sbjct: 348 TDVAARGLDVDRIGLVVNFDIPREAEAYVHRIGRTGRAGRTGRAVSFVTPHERGKLKFIE 407 Query: 362 KLLKKEIPRIAIP 374 +K + I IP Sbjct: 408 NTIKVSLEEIDIP 420 >UniRef50_C5RIK3 DEAD/DEAH box helicase domain protein n=3 Tax=Clostridia RepID=C5RIK3_CLOCL Length = 536 Score = 296 bits (759), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 155/389 (39%), Positives = 237/389 (60%), Gaps = 7/389 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ L L +IL+A+ + G+ EP+PIQ ++IP +EG DL+ AQTGTGKTA F +L Sbjct: 6 TFNELNLKDEILKAINDMGFEEPSPIQSESIPVGIEGYDLIGQAQTGTGKTAAFGSIILN 65 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 ++ ++ RR +ALIL PTRELA Q+ E + +K + + L ++GG I+ Q+ Sbjct: 66 NM------SEKRRVPQALILAPTRELAIQVNEELVRIAKNMRLNILPIYGGQPIDRQLRA 119 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GVD++V TPGR+LD + ++ + V+ LVLDEAD ML+MGFI DI V+ L R Sbjct: 120 LRNGVDIVVGTPGRVLDHLRRKSLNTEFVKFLVLDEADEMLNMGFIDDIEEVMKSLNEDR 179 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTAS-DQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT D IK L+++ + + ++ +NT + +TQ+ + + + E L +I Sbjct: 180 QTLLFSATMPDAIKRLSKRYMKSDAKLISIEKNTVTASTITQYYYEIKNSDRFESLCRII 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + ++F +TK G + L + + G +HG+ +Q R L FK ++ LV Sbjct: 240 DADEPEAAIIFCKTKKGVDELVSSMQRRGYVVEGMHGDMNQNQRMNTLKKFKESNLDFLV 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+D+E + HV+NY+LP E YVHRIGRTGRA G+A +LV E+ +L+ I Sbjct: 300 ATDVAARGIDVENVTHVINYDLPQDAESYVHRIGRTGRANKEGKAYTLVTPREYIVLKQI 359 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQN 389 EK K +I R ++P + +K + + N Sbjct: 360 EKTTKSKIKRNSVPTVDEIYDVKYKNVLN 388 >UniRef50_Q0AVQ9 ATP-dependent RNA helicase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AVQ9_SYNWW Length = 530 Score = 296 bits (759), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 155/373 (41%), Positives = 234/373 (62%), Gaps = 7/373 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F S+GL D+L+ + E+G+ +PTPIQ ++IP + G DLM AQTGTGKTA F +P+L Sbjct: 5 NFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILN 64 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 +I KG ++AL+L PTRELA Q+ E + S+ + I+ L ++GG SI Q+ Sbjct: 65 RVI------KGE-GLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRS 117 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR +++V TPGRL+D ++ + L ++ +VLDEAD MLDMGF+ DI+++L++ P +R Sbjct: 118 LRRNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQCPRER 177 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT D+++ L K + P I + ++ Q+ + V+ +RK E L +I Sbjct: 178 QTFLFSATLPDEVRELGTKFMKQPEIILIESPERTVPEIEQYYYQVNSRRKIETLCRIID 237 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 L+F RTK A+ LA L G + A+HG+ SQ R + F+ G+ ++LVA Sbjct: 238 AQQPPISLIFCRTKRNADELARVLTSRGYNADALHGDMSQRERDHVMHGFRQGNTKILVA 297 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLDIE + HV N+++P + Y+HR+GRTGRA +G A++LV + +LLR IE Sbjct: 298 TDLAARGLDIELVTHVFNFDIPEDLDSYIHRVGRTGRAGRSGIAITLVEPTQIRLLRMIE 357 Query: 362 KLLKKEIPRIAIP 374 + K I R +P Sbjct: 358 RHTGKRIERALLP 370 >UniRef50_C0Q9A4 DeaD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9A4_DESAH Length = 616 Score = 296 bits (759), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 159/376 (42%), Positives = 228/376 (60%), Gaps = 7/376 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +GL +L+A+ + GY PT IQ + IP +L GRDL+ AQTGTGKTA F LPLL Sbjct: 21 FSEMGLIKPVLKALDDLGYETPTTIQAETIPYILAGRDLLGQAQTGTGKTAAFALPLLSR 80 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMMK 121 + K ++P + L+L PTRELA Q+ E+ + Y+ + L V+GG + Q+ + Sbjct: 81 I-----DIKLKKP-QVLVLAPTRELAIQVAESFKGYAARIKGFNVLPVYGGQAYAGQLNQ 134 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV V+V TPGRL+DL + + L Q+ LV+DEAD ML MGFI D+ +L + P R Sbjct: 135 LKRGVHVIVGTPGRLMDLMKRGVLDLTQIMTLVIDEADEMLRMGFIDDVEWILEQTPPGR 194 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT IK +A K L +P ++ + R +D + Q V K + L+ ++ Sbjct: 195 QVALFSATMPAPIKKIAIKYLTDPKDVFIRLRTATADTIRQRFWMVKGTHKLDALTRILE 254 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + ++VF RTK LAE+L G + A++G+ +Q AR R + FK G I +LVA Sbjct: 255 AETFDAIIVFVRTKTATVELAEKLEARGYAAVALNGDIAQKARERTIDRFKKGKIDILVA 314 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + HV+NY++PN E YVHRIGRTGRA G+A+ V E +L+ IE Sbjct: 315 TDVAARGLDVERVSHVINYDIPNGAESYVHRIGRTGRAGRAGDAILFVSPRERWMLKVIE 374 Query: 362 KLLKKEIPRIAIPGYE 377 K +++I + +P E Sbjct: 375 KTTRQQIEMMKLPSTE 390 >UniRef50_C5EJJ1 DEAD/DEAH box helicase domain-containing protein n=7 Tax=cellular organisms RepID=C5EJJ1_9FIRM Length = 572 Score = 296 bits (759), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 159/388 (40%), Positives = 234/388 (60%), Gaps = 7/388 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + FD L L I+RA+ E G+ E +PIQ QAIP +EGRD++ AQTGTGKTA F +PLL Sbjct: 4 VKFDELQLDERIIRAITEMGFEEASPIQAQAIPVAMEGRDMIGQAQTGTGKTAAFGIPLL 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 Q + P K ++A+IL PTRELA Q+ E +R +K+++ + L ++GG I Q+ Sbjct: 64 QKV---DPKVK---KLQAIILLPTRELAIQVAEEMRRLAKFMHGTKVLPIYGGQDIVKQI 117 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ G ++V TPGR++D + VK+D V +VLDEAD ML+MGF+ D+ +L++LP Sbjct: 118 RSLKDGTQIVVGTPGRVMDHMRRKTVKMDHVHTVVLDEADEMLNMGFLEDMETILSQLPE 177 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ L+FSAT I +A K +P+ + V ++ +VTQ+ + V K K E++ + Sbjct: 178 ERQTLMFSATMPQAIADIARKFQDDPVTVRVIKKELTVPKVTQYYYEVKPKNKVEVMCRL 237 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + +VF TK + L + L G + +HG+ Q R R + F++G +L Sbjct: 238 LDMYAPKLSIVFCNTKRQVDELVQALQGRGYFAEGLHGDLKQVQRDRVMGSFRNGRTDIL 297 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+ ++ V NY++P E YVHRIGRTGRA G+A SLV E LRD Sbjct: 298 VATDVAARGIDVGDVEAVFNYDVPQDDEYYVHRIGRTGRAGREGKAFSLVVGKEVYKLRD 357 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPI 387 I++ K +I AIP IK E + Sbjct: 358 IQRYCKTKIIPQAIPSLNDITEIKVEKV 385 >UniRef50_Q12UP5 Dead box RNA helicase n=4 Tax=Archaea RepID=Q12UP5_METBU Length = 522 Score = 296 bits (758), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 167/404 (41%), Positives = 248/404 (61%), Gaps = 16/404 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF LG+ ILR++ ++ + EPT IQ+ AIP +LEG+D++ A TG+GKT F ++Q Sbjct: 3 SFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQ 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + KG +RAL+LTPTRELA Q+ +++++S++ +R ++GGV+INPQ+ + Sbjct: 63 KI------EKGN-GIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQ 115 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L DV+VATPGRLLD + + L VEILVLDEADRMLDMGFI D+ ++ + P+ R Sbjct: 116 LERA-DVVVATPGRLLDHIERGTIDLGDVEILVLDEADRMLDMGFIDDVEEIIDECPSDR 174 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q ++FSAT S DI+ L+ K ++NP ++ A+ SD++ Q V KK K LL H++ Sbjct: 175 QTMMFSATVSKDIQYLSSKYMNNPSKV-FAKAYVDSDKLKQVYIDVPKKMKFSLLVHLLK 233 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 V+VF T+ + + + L K+ I + AIHG +Q R L+ F S + LV Sbjct: 234 SEKSGLVMVFCNTRSNVDFVQKNLRKNDIDAIAIHGGHTQAKRKSTLSKFHSSNAHALVC 293 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC-VDEHKLLRDI 360 TD+AARGLDI + HV N+++P+ P +YVHRIGRT RA G+ +++V VD+ R Sbjct: 294 TDVAARGLDIPHVSHVYNFDIPDDPSEYVHRIGRTARAGREGKVINVVADVDKGGFTRLS 353 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAE-----PIQNGRQQRGGGGR 399 + +I R +P +E IK+E P + R+ R GG R Sbjct: 354 KMHRNFKIEREDLPEFER-VLIKSEDSGGRPTRGRREDRKGGRR 396 >UniRef50_C5C5R9 DEAD/DEAH box helicase domain protein n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C5R9_BEUC1 Length = 589 Score = 296 bits (757), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 169/374 (45%), Positives = 222/374 (59%), Gaps = 7/374 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SFD LGL +L AV G+ PTPIQ AIPA+L GRDL+ AQTGTGKTA F LPLL Sbjct: 21 SFDDLGLPQALLDAVTGLGFTTPTPIQTAAIPALLSGRDLVGVAQTGTGKTAAFGLPLLA 80 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKY-LNIRSLVVFGGVSINPQMM 120 + P V+AL+LTPTRELA Q+ + V + ++ L ++GG S PQ+ Sbjct: 81 AV---DPQLAA---VQALVLTPTRELAIQVSDAVASFVPSGAGVKVLPIYGGASFVPQLR 134 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L G V+V TPGR++DL + ++ LD + LVLDEAD ML MGF D+ +L K PA Sbjct: 135 GLERGAQVVVGTPGRVIDLLERGSLDLDALRYLVLDEADEMLRMGFAEDVDVILAKTPAT 194 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 +Q LFSAT I+ +AE L NP EI VAR+ T VTQ V + K E LS ++ Sbjct: 195 KQVALFSATMPPPIRKVAETHLRNPEEIAVARQATPIAAVTQTYAIVPYRNKAEALSRVL 254 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +VF RT+ A + L GI +A+I G+ +Q R R + +SG + VLV Sbjct: 255 ATSDADAAIVFVRTRETAEEVGTALASRGINAASISGDVAQRERERIVERLRSGALDVLV 314 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD+E + VVN+++P E YVHRIGRTGRA TG AL+ + E LR I Sbjct: 315 ATDVAARGLDVERIGLVVNFDVPREVETYVHRIGRTGRAGRTGNALTFLTPKEKPRLRTI 374 Query: 361 EKLLKKEIPRIAIP 374 E++ + IP Sbjct: 375 ERVTGSRLVEATIP 388 >UniRef50_Q5ZT20 ATP-dependent RNA helicase n=4 Tax=Legionella pneumophila RepID=Q5ZT20_LEGPH Length = 589 Score = 296 bits (757), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 163/394 (41%), Positives = 231/394 (58%), Gaps = 15/394 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F + S + +A+ + + P+PIQ Q IP +L+GRD +A AQTGTGKTA F LP+LQ Sbjct: 7 NFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPILQ 66 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 +L P +ALIL PTRELA Q+ E SKY N+ V+ GG Q+ Sbjct: 67 NL---SPEIS---TTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLK 120 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +LR G V+V TPGR+LD + + L+ ++ +LDEAD ML MGFI D+ +L KLP K Sbjct: 121 QLRSGAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEK 180 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 +Q LFSAT I+ +A L++P IE+ + Q F +K + L ++ Sbjct: 181 KQMALFSATMPYRIRQIANTYLNDPASIEIRMETATVKSIEQRFLFASVHQKPDALIRVL 240 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++Q V+VF RTK +AE L + G+R+ AIHG+ +Q R R +A FK G I +LV Sbjct: 241 EVEDYQGVIVFVRTKSSTEEVAELLQQHGLRAMAIHGDITQSLRERIIAQFKQGAIDILV 300 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD+E + HV+NY++P+ E YVHRIGRTGRA +G + V E +L+ I Sbjct: 301 ATDVAARGLDVERVTHVINYDMPHDNETYVHRIGRTGRAGRSGVTILFVTPKESRLISSI 360 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQR 394 E+ ++ I ++ +P IQ RQQR Sbjct: 361 ERHTRQRIEKVQVPN--------DHMIQMARQQR 386 >UniRef50_Q1IMK6 DEAD/DEAH box helicase-like n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IMK6_ACIBL Length = 423 Score = 295 bits (756), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 168/371 (45%), Positives = 235/371 (63%), Gaps = 10/371 (2%) Query: 2 SFDSLGLSPDILRAVAEQG-YREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +F+ + LS D+L+ E + PTP+Q++AIP L+GRD++A+AQTGTGKT F +P L Sbjct: 28 TFNDMPLS-DVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKTLAFIIPAL 86 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSL-VVFGGVSINPQM 119 + L +P V+ LIL PTRELA Q+ V + K ++S +V GG S Q+ Sbjct: 87 EMLRDTEPCG-----VQVLILVPTRELAMQV-HGVYEQLKGKKLKSAALVMGGTSERNQI 140 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 +R G V+VATPGRL D + V L QVE+LVLDEADRM+DMGF+ I+R+L LP Sbjct: 141 QSIRSGARVVVATPGRLEDYMGRRLVDLSQVEMLVLDEADRMMDMGFLPAIKRILRALPR 200 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +Q L FSAT + + + L+N + +E+ + V H V K++ L + Sbjct: 201 DKQTLCFSATMGPAVSGIVQDCLYNAVRVEIGSILKPAAAVELHAIEVPIMGKKDALRQL 260 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + + LVF RTK G LA++L +DG +A IHG++SQ R ALA F G I+VL Sbjct: 261 LYEQEGK-TLVFARTKRGTERLAKELIRDGFSAAMIHGDRSQSQRNAALAAFDKGSIKVL 319 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD++++ HV+N++LP VPED++HR+GRTGRA ATG A SLV E LR+ Sbjct: 320 VATDVAARGLDVDDIAHVINFDLPQVPEDFIHRVGRTGRAGATGMATSLVSGAEVFELRN 379 Query: 360 IEKLLKKEIPR 370 IE+ LK +I R Sbjct: 380 IERTLKLKIAR 390 >UniRef50_A3ZWP8 ATP-dependent RNA helicase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZWP8_9PLAN Length = 428 Score = 295 bits (756), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 150/378 (39%), Positives = 233/378 (61%), Gaps = 4/378 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +++ + LS ++ A+ Y +P+PIQ IP LEGRD++ A+TGTGKTA F +P++ Sbjct: 4 INYADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPII 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L H R +ALILTPTRELA Q+ + + + I + V+GG + QM Sbjct: 64 ERL----EHGPNSRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQME 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL+ ++V TPGR++DL + A++L+ + +VLDEADRMLD+GF DI ++L + P + Sbjct: 120 KLKRAPHIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRRCPEE 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LL SAT I+ LA++ + NP +++ + N +++ + Q VD +K ++L ++ Sbjct: 180 RQTLLLSATVPPTIEKLAQRYMRNPEKVDFSPTNISAETIEQRYFTVDHSKKFDMLVELL 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + Q+ +VF RTK G + ++L+K IHG+ QGAR RAL+DFK+ RVLV Sbjct: 240 KREQPQKAIVFCRTKRGTERITQRLSKKTKLVHCIHGDMQQGARNRALSDFKASKFRVLV 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+ RG+DI ++ H++NY++P +DYVHR+GRTGR G A + V +E L I Sbjct: 300 ATDVVGRGIDISDVSHIINYDIPEFSDDYVHRVGRTGRMGKEGIAYTFVTPEEGNELTRI 359 Query: 361 EKLLKKEIPRIAIPGYEP 378 E + K + R +PG+ P Sbjct: 360 EVRIDKLLIRDELPGFAP 377 >UniRef50_B0TII3 Dead/deah box helicase n=18 Tax=Bacteria RepID=B0TII3_HELMI Length = 540 Score = 295 bits (756), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 150/374 (40%), Positives = 232/374 (62%), Gaps = 6/374 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F + LSP + +A+ + G+ EP+PIQ +AIP +++G+DL+ AQTGTGKTA F +P+ Sbjct: 18 VKFGEIELSPKVAKAIFDMGFEEPSPIQAKAIPVIMQGKDLIGQAQTGTGKTATFGIPMA 77 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L R GR V+AL+L PTRELA Q+ + + + ++++L V+GG SI+ Q+ Sbjct: 78 ETLNPRD----GR--VQALVLCPTRELAIQVAQEISKIGRQNDLKALPVYGGQSIDRQIR 131 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR GV V++ TPGR+LD + ++L+ V ++VLDEAD MLDMGF+ DI +L + P + Sbjct: 132 ALRYGVQVVIGTPGRILDHLSRKTLRLNNVRMVVLDEADEMLDMGFVEDIEAILKETPEE 191 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT I+ LA + + P + ++R + Q + + +K + L ++ Sbjct: 192 RQTLLFSATMPGPIQQLARQYMKEPEFVTISRDKLTVPLIEQVYYECKESQKVDALCRIL 251 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++F RTK G + L L G + +HG+ +Q R R + F+ G +L+ Sbjct: 252 DMEEIGSSIIFCRTKRGVDELVAALETRGYFAEGLHGDLTQAQRDRVMKKFRDGKAELLI 311 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD+E + HV+NY++P PE YVHRIGRTGRA G A++L+ E++ L+ I Sbjct: 312 ATDVAARGLDVENVTHVINYDIPQDPESYVHRIGRTGRAGRKGIAITLINYREYRQLKLI 371 Query: 361 EKLLKKEIPRIAIP 374 E++ K I R +P Sbjct: 372 ERVTKARIQRRDLP 385 >UniRef50_C0ZI64 Putative ATP-dependent RNA helicase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI64_BREBN Length = 493 Score = 295 bits (756), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 167/459 (36%), Positives = 263/459 (57%), Gaps = 30/459 (6%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF S G P++++ + + Y+EPT IQ++AIP ++EG+DL+ AQTGTGKTA F LP+L Sbjct: 4 SFASFGFRPELMQGIQDLYYKEPTQIQEEAIPLIMEGKDLIGQAQTGTGKTAAFMLPILN 63 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L +G+R ++ALILTPTREL+ QI + V K+LN+ L + GG I+ Q+ K Sbjct: 64 AL------DEGKRDIQALILTPTRELSIQIAKEVEKLGKHLNVNVLSLHGGTDIDKQLSK 117 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ V ++V TPGR+LD + ++ ++ LVLDEAD+M++MGF+ D+ +V+ P++R Sbjct: 118 LKETVQIVVGTPGRVLDHMKRGSLHFGRISTLVLDEADKMMEMGFLEDVEQVIVHTPSQR 177 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT D +K LA + + P I++ + +++ Q + V++ K + L ++ Sbjct: 178 QVLLFSATMPDLVKKLAHRFMKQPPHIKIEGKQKTVERIEQFYYVVNQSDKTDALVDVLE 237 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +VF T+ L +L ++G+ + A++G+ SQ R + + F+ + L+A Sbjct: 238 QEQPFLTIVFANTQVRVQQLTARLQENGLSAKALYGDLSQNKREQLMKQFREIRFQFLIA 297 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TDIAARGLD+E + HV+NY+LPN + Y+HR+GRTGRA G+A+SL+ + L+ Sbjct: 298 TDIAARGLDVEGVTHVINYDLPNDVDSYIHRVGRTGRAGQKGKAISLISPRQKNLMARFA 357 Query: 362 KLLKKEI-PRIAIPGYEPDPSIKAEPIQNGRQQRGGGG-------RGQGGGRGQQQPRRG 413 K K I RI G D GR+QR R Q Q++ + Sbjct: 358 KATKASIEERILQEGRHLDA---------GRRQRAEEREAHFIELRAQQAKEQQKEKDKE 408 Query: 414 -----EGGAKSASAKPA--EKPSRRLGDAKPAGEQQRRR 445 E K KP +K +R LGD + E+ R++ Sbjct: 409 FSPVREAIKKKTKVKPGYKKKMARELGDLQTQYEKNRKK 447 >UniRef50_C0W1P0 Superfamily II helicase n=2 Tax=Actinomyces RepID=C0W1P0_9ACTO Length = 616 Score = 295 bits (755), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 157/376 (41%), Positives = 229/376 (60%), Gaps = 9/376 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L L ++L A+ E G+ PTPIQ+QAIP +LEGRD++ AQTGTGKTA F LP+L Sbjct: 6 TFADLNLPENVLSAITEMGFETPTPIQEQAIPHLLEGRDIVGIAQTGTGKTAAFGLPMLA 65 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 H+ G V+A++L PTRELA Q + ++ ++ ++ + V+GG S PQ+ Sbjct: 66 HI------DPGFNAVQAIVLAPTRELAMQSATAIESFAAHMPKVKVVTVYGGASYTPQIK 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP-- 178 L+ G V+V TPGR++DL + A+KL+ V +LVLDEAD ML MGF D+ + +P Sbjct: 120 GLKSGAQVVVGTPGRVIDLIEKGALKLNNVSVLVLDEADEMLRMGFAEDVETIAASMPES 179 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 KR LFSAT D I+ +A++ L +P+ IEVAR+++ + + Q V K K L Sbjct: 180 GKRITALFSATMPDFIQRVADQHLTDPVRIEVARQSSTVENIHQTYAVVPFKHKLGALGR 239 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + +VF RT+ A+ +A + G +AAI G+ SQ R R ++ + G + V Sbjct: 240 VLATRDEDAAIVFVRTRVDADEVAVDMATRGFTAAAISGDVSQNERERIVSRLRDGSLDV 299 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLD+E + V+N+++P E YVHR+GRTGRA G +L+ E LR Sbjct: 300 LVATDVAARGLDVERIGLVINFDVPRETEAYVHRVGRTGRAGRAGRSLTFFTPKEQFRLR 359 Query: 359 DIEKLLKKEIPRIAIP 374 IEKL ++ I IP Sbjct: 360 QIEKLTGTKMEEIVIP 375 >UniRef50_B9SM44 Dead box ATP-dependent RNA helicase, putative n=2 Tax=Magnoliophyta RepID=B9SM44_RICCO Length = 650 Score = 295 bits (754), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 165/371 (44%), Positives = 226/371 (60%), Gaps = 23/371 (6%) Query: 21 YREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVR--- 77 Y +PTP+Q+ AIP L GRDLMA AQTG+GKTA F P++ ++ Q + +RP+R Sbjct: 208 YVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMKMQGQS-AQRPLRGAR 266 Query: 78 -----ALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVAT 132 ALIL+PTREL+ QI E R +S ++ +V +GG IN Q+ +L GVD+LVAT Sbjct: 267 MVYPLALILSPTRELSMQIHEEARKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVAT 326 Query: 133 PGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTK----LPAKRQNLLFSA 188 PGRL+DL + V L V L LDEADRMLDMGF IR+++ + P RQ +LFSA Sbjct: 327 PGRLVDLLERARVSLQMVRYLALDEADRMLDMGFEPQIRKIVEQNDMPRPGARQTMLFSA 386 Query: 189 TFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG------- 241 TF +I+ LA L N + + V R +++D + Q V FV + KR L ++ Sbjct: 387 TFPKEIQRLATDFLFNYIFLAVGRVGSSTDLIIQRVEFVQESDKRSHLMDLLHAQRANGV 446 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 +G LVF TK GA+ L L +G + +IHG++SQ R +AL F+SG+ +LVA Sbjct: 447 QGKQALTLVFVETKKGADSLEHWLYVNGFPATSIHGDRSQQEREQALRSFRSGNTPILVA 506 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL---LR 358 TD+AARGLDI + HVVN++LPN +DYVHRIGRTGRA +G A + L L Sbjct: 507 TDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEGNASLAMALA 566 Query: 359 DIEKLLKKEIP 369 D+ + +E+P Sbjct: 567 DLMQESNQEVP 577 >UniRef50_D2V713 ATP-dependent RNA helicase n=1 Tax=Naegleria gruberi RepID=D2V713_NAEGR Length = 629 Score = 295 bits (754), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 159/391 (40%), Positives = 236/391 (60%), Gaps = 18/391 (4%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L P +++ + G+ +PTP+Q+ +IP VL GRDL++ AQTG+GKT F P++ Sbjct: 153 AFKEANLPPKLMQNIERAGFGKPTPVQKHSIPIVLAGRDLLSCAQTGSGKTCAFLFPIIS 212 Query: 62 HLITR------QPHAKGRRPV----RALILTPTRELAAQIGENVRDYSKYLNIRSLVVFG 111 +L+T+ PH + + LI+ PTREL+ QI + R ++ + R++V +G Sbjct: 213 NLMTQPGYETVMPHPELMDTLVTCPSVLIMAPTRELSTQIYDESRKFTYHTGRRTVVAYG 272 Query: 112 GVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIR 171 G +I Q+ +L G D+LVATPGRL+DL + ++ L V+ LVLDEADRMLDMGF IR Sbjct: 273 GAAIQYQLKQLERGCDILVATPGRLVDLIDRGSISLHNVQYLVLDEADRMLDMGFEPQIR 332 Query: 172 RVLTKL----PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFV 227 ++ K P +R L+FSATF +I+ LA LHN L + V R + + + Q + Sbjct: 333 YIVEKTGMPAPGQRITLMFSATFPKNIQTLARDFLHNNLNLTVGRVGSTHENILQKFVYC 392 Query: 228 DKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRA 287 KR+L+ I LVF +TK A+ L L K+G +S++IHG+K+Q R A Sbjct: 393 KDDEKRDLMLEAIASVE-TLTLVFVKTKKEASILEYFLMKNGFKSSSIHGDKTQRERETA 451 Query: 288 LADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALS 347 L +F+ G +LVATD+A+RGLDI ++ HV+NY+LP EDYVHRIGRTGRA TG + S Sbjct: 452 LENFRRGITPILVATDVASRGLDINDVGHVINYDLPENIEDYVHRIGRTGRAGNTGISTS 511 Query: 348 LVCVDEHKLLRDIEKLL---KKEIPRIAIPG 375 +++ D+ +L K+E+P + G Sbjct: 512 FFTDKNNQIADDLITVLEEAKQEVPPFIVEG 542 >UniRef50_A6VJ89 DEAD/DEAH box helicase domain protein n=5 Tax=Euryarchaeota RepID=A6VJ89_METM7 Length = 546 Score = 295 bits (754), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 159/376 (42%), Positives = 235/376 (62%), Gaps = 11/376 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEG-RDLMASAQTGTGKTAGFTLPLL 60 SF +LGLS +I++A+ ++G+ PTPIQ+QAIP ++EG RD++ AQTGTGKTA F +P+L Sbjct: 3 SFKNLGLSDEIIKALEKKGFTNPTPIQEQAIPILIEGKRDVVGQAQTGTGKTAAFGIPIL 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDY--SKYLNIRSLVVFGGVSINPQ 118 + + + R +ALIL PTRELA Q+ E + SK LN+ V+GG SI+ Q Sbjct: 63 ETI------DESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNV--FPVYGGQSIDRQ 114 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 + +L+ GV ++V TPGR+LD + +KL+ V +VLDEAD ML+MGFI D+ +L + Sbjct: 115 IRELKRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVS 174 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 +++ LLFSAT D I LA+ + I+V R+ + Q + + + K ELLS Sbjct: 175 TEKRMLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSYYEIHSRDKFELLSR 234 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 +I L+F +TK + ++ +L + G + +HG+ +Q R + L FK+ I V Sbjct: 235 IIDVEKEFYGLIFCKTKADVDEISSRLTEKGYAAEGLHGDMTQAQREKTLDKFKARKINV 294 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARG+DI +L HVVNY++P PE YVHRIGRTGRA G A++ V E + + Sbjct: 295 LVATDVAARGIDINDLTHVVNYDIPQNPESYVHRIGRTGRAGKQGYAVTFVEPSEFRKFK 354 Query: 359 DIEKLLKKEIPRIAIP 374 I+K+ EI + +P Sbjct: 355 YIQKIANTEIRKEEVP 370 >UniRef50_D2QY81 DEAD/DEAH box helicase domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QY81_9PLAN Length = 458 Score = 294 bits (753), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 181/451 (40%), Positives = 256/451 (56%), Gaps = 15/451 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F S+ LS ++ A+ + GY PTPIQ IP LEG D++ A+TGTGKTA F +P+L+ Sbjct: 13 TFASMDLSDQMMAALEKAGYEYPTPIQAGLIPRALEGVDVVGQARTGTGKTASFVIPILE 72 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L +G +ALIL PTRELA Q+ + V S+ L I V+GG I Q+ K Sbjct: 73 LLDIE----RGAPTPQALILVPTRELAVQVRDEVVKLSEGLKINCAAVYGGKPIKSQVDK 128 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G V+V TPGR+LD + + +E +VLDEADRMLD+GF DI R+L + P +R Sbjct: 129 LKKGCHVVVGTPGRVLDHIARGTIDFTHIECVVLDEADRMLDIGFRPDIERILKRCPRER 188 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LL SAT I LA++ ++ P + + + + D + Q V+ RK +LL ++ Sbjct: 189 QTLLLSATVPPPIAKLAQRYMYEPEMLNFSPADVSVDTIEQKYFTVEHDRKFDLLMKLLL 248 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +Q +VF RTK G + + ++L K +AAIHG+ SQG R R +A F+ G +R LVA Sbjct: 249 REEPKQAIVFCRTKRGTDKVYQKLTKKLGNTAAIHGDLSQGQRDRVMAGFRDGSVRYLVA 308 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDE-HKLLR-- 358 TD+ RG+D+ + H+VN+++P +DYVHR+GRTGR G A + VC DE H+L R Sbjct: 309 TDVIGRGIDVSTVSHIVNFDIPVFCDDYVHRVGRTGRMGREGVAYTFVCPDEGHELTRIE 368 Query: 359 -DIEKLLKKEIPRIAIP-GY-EPDPSIKAEPIQ--NGRQQRGGGGRGQGGGRGQQQPRRG 413 I KLLK++ R P GY E A P Q +G+ GG G P G Sbjct: 369 ERINKLLKRDEMRDFEPVGYGERSARAPAAPTQVISGKYMHGGNASGVAPTE-SATPSEG 427 Query: 414 EGGAKSASAKPAEKPSRRLGDAKPAGEQQRR 444 + A A+ EK LG K G++ RR Sbjct: 428 DSPAAEAAPAATEKRDSGLG--KRGGKKYRR 456 >UniRef50_Q30YG9 DEAD/DEAH box helicase-like n=9 Tax=Deltaproteobacteria RepID=Q30YG9_DESDG Length = 530 Score = 294 bits (753), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 165/394 (41%), Positives = 242/394 (61%), Gaps = 3/394 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF L P ++ AV+ +G+ PTPIQ++A+P L G+D++ A TGTGKTA F LPLL Sbjct: 56 VSFARFSLHPALIEAVSARGFVNPTPIQEKALPPALAGQDILGLAATGTGKTAAFVLPLL 115 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L+ + A+G +RAL++ PTREL AQI E V+ +++ +RS V+GGV ++ Q + Sbjct: 116 HRLLLQGESARG--TLRALVVAPTRELVAQIHEEVKTLARFCRLRSATVYGGVGMHAQTV 173 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +LR GVD+++A PGRLLD + L V++LVLDEAD M DMGF+ D+R +L + Sbjct: 174 QLRTGVDIVLACPGRLLDHVRRGHADLSHVDMLVLDEADMMFDMGFLSDVREILHCTRVR 233 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 +Q +LFSAT ++ LAE+ L P+ IE+ A V + V K K LL +++ Sbjct: 234 KQTMLFSATMPAPLRELAEECLRQPVRIELDTCAIAPT-VRHSLCPVPKHLKTPLLKYVL 292 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 VLVF RT+HGA L +QL K GI + + GN SQG R AL F+ G RV+V Sbjct: 293 RAFARDSVLVFVRTRHGARRLWQQLVKSGIEATCLQGNLSQGRRRAALEGFRRGTFRVMV 352 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ ++ +V+NY+ P E VHR GRTGRA+ +G AL+ V ++ +R + Sbjct: 353 ATDIAARGIDVSQVGYVINYDFPPSVEACVHRAGRTGRASNSGVALTFVTQEDEPQVRTL 412 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQR 394 E++L + R G++ + E + R +R Sbjct: 413 ERVLGGALSRWHAEGFDYSALQRTEAARPARLRR 446 >UniRef50_Q30PP0 DEAD/DEAH box helicase-like protein n=11 Tax=Bacteria RepID=Q30PP0_SULDN Length = 540 Score = 294 bits (752), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 152/374 (40%), Positives = 229/374 (61%), Gaps = 7/374 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++FD LGL +ILR+V + G+ P+PIQ AIP +L GRD++ A TGTGKTA F LP L Sbjct: 14 ITFDDLGLKKEILRSVKDAGFTVPSPIQAAAIPFILAGRDIVGQAHTGTGKTAAFGLPAL 73 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 ++ P+ V L++TPTRELA Q+ + + Y + + R++ V+GG S N Q+ Sbjct: 74 NNI---NPNDG----VGILVITPTRELATQVSDELFKYGRNIGARTVTVYGGSSYNRQID 126 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 ++ G V+VATPGRLLD+ +N +K I+VLDEAD MLDMGF+ DI + + LP+ Sbjct: 127 LIQRGASVVVATPGRLLDILKKNLLKDFAPSIVVLDEADEMLDMGFLDDINEIFSYLPSN 186 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT IK LAE++L NP I + + T + + Q + +++ + + + ++ Sbjct: 187 RQTLLFSATMPKPIKLLAERILDNPEFISITKGETTNTDINQEYYVIEESERDDAIIRLM 246 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 Q+ +VF RTK + L+ L+ G + +HG+ Q R + FK+ ++VLV Sbjct: 247 DAEACQKSIVFCRTKSEVDRLSNVLSSAGYLANGLHGDMEQRQRETVIKGFKNNGVKVLV 306 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+ ++ + HV NY +P PE YVHRIGRTGRA G+A++L+ E K L+ I Sbjct: 307 ATDVAARGIHVDNISHVFNYHIPFDPESYVHRIGRTGRAGTKGKAITLLTPLEFKELQRI 366 Query: 361 EKLLKKEIPRIAIP 374 + + + +P Sbjct: 367 KTKVGTTMTHAFVP 380 >UniRef50_B0SU57 ATP-dependent RNA helicase, DEAD-box family (DeaD) n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SU57_LEPBP Length = 534 Score = 293 bits (751), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 151/355 (42%), Positives = 220/355 (61%), Gaps = 7/355 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F S GL P+IL+ + E G+ P+PIQ+QAIP VLEG+DL+A AQTGTGKTA + LP L Sbjct: 17 FQSFGLRPEILQGITEAGFESPSPIQKQAIPLVLEGKDLIAQAQTGTGKTAAYGLPCLNR 76 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + K ++ L+LTPTRELA Q+ + + K+L I++ ++GG S + Q+ ++ Sbjct: 77 I-------KVEDGMQVLVLTPTRELALQVSDELFKLGKHLGIKTTTIYGGSSYSKQITQV 129 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 G V VATPGRLLDL +K + +++LDEAD MLDMGF+ DI + LP KRQ Sbjct: 130 AKGAQVAVATPGRLLDLLKGKELKNFKPSMVILDEADEMLDMGFMDDIESIFNLLPTKRQ 189 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 LLFSAT + IK LA K +P +++A +S + Q + +D+ + + ++ Sbjct: 190 TLLFSATMPEPIKKLASKYQTHPAHVKIAATEKSSKNIEQVYYIIDEAEREIAVVRILDY 249 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 N + ++FT+TK A+ L L+ G A+HG+ +Q R + L G +++LVAT Sbjct: 250 ENPFKAIIFTKTKKEADDLKSTLSFKGYPVEALHGDLNQKQREQVLKSLHDGRVKILVAT 309 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 D+AARGLD+++L V+NY LP E Y HRIGRTGRA +G+A++LV E + L Sbjct: 310 DVAARGLDVKDLSLVINYHLPFDSESYTHRIGRTGRAGKSGKAVTLVTTRESRAL 364 >UniRef50_C6E4K1 DEAD/DEAH box helicase domain protein n=9 Tax=Proteobacteria RepID=C6E4K1_GEOSM Length = 490 Score = 293 bits (751), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 172/452 (38%), Positives = 253/452 (55%), Gaps = 24/452 (5%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L + ++ + + E G+ + TPIQ++A+P L G+D+ AQTGTGKTA F + + Sbjct: 1 MKFTELKIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIF 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L++ Q G RALIL PTREL QI ++ + KY ++GGV Q Sbjct: 61 TKLLS-QAKTGGEHHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRD 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA- 179 L+ G D+++ TPGRL+D Q + VE LV+DEADRM DMGFI D+R +L +LP Sbjct: 120 ALKAGADIVIGTPGRLIDYLKQKVYSVKDVEALVIDEADRMFDMGFIADLRFILRRLPPY 179 Query: 180 -KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 KRQNLLFSAT + + LA + ++ P ++ V +++V Q ++ V +K K LL Sbjct: 180 DKRQNLLFSATLNTRVMELAYEFMNMPEKVSVTPEQMTAERVEQVLYHVSRKEKFPLLLG 239 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ K ++ ++F TK A +L ++LN + I G+ Q R + LADFK G + + Sbjct: 240 LLRKMGMERTMIFVNTKREAEYLQDRLNANEFPGKVISGDVEQRKRMKILADFKDGTLPI 299 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 ++ATD+A+RG+ IE + HV+NY+LP EDYVHRIGRT RA A G A+S D + Sbjct: 300 MIATDVASRGIHIEGVSHVINYDLPQDCEDYVHRIGRTARAGAEGMAISFADEDGAFYIE 359 Query: 359 DIEKLLKKEIPR------IAIPGYEPDPSIKAEPIQNGRQQRGG--GGRGQGGGRGQQQP 410 IE +K++IP + + Y+ K P RGG G RG+ G +G Sbjct: 360 PIEDFIKQKIPTEWAEDDMFVHDYK---RTKPRPRTELPHGRGGKPGDRGRSGDKG---- 412 Query: 411 RRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQ 442 R G+ G +PA + G KPAGE++ Sbjct: 413 RPGDKG------RPAGRSRSASGSDKPAGEKK 438 >UniRef50_Q11UP8 ATP-dependent RNA helicase (Cold-shock DEAD-box protein A) n=2 Tax=Bacteria RepID=Q11UP8_CYTH3 Length = 580 Score = 293 bits (751), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 152/375 (40%), Positives = 228/375 (60%), Gaps = 7/375 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F LGLSP+++ A+ GY E TPIQ++ IP ++ G+DL AQTGTGKTA F +P + Sbjct: 1 MLFKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAI 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 +H+ + +LIL PTRELA Q+ ++ SK+ +R L V+GG SI Q+ Sbjct: 61 EHVDISINQTQ------SLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQI 114 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ G ++V TPGR++D + + + ++LDEAD ML+MGF DI +LT+LP Sbjct: 115 RDLKAGAHIVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLNMGFREDIELILTRLPE 174 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ +LFSAT + I ALA++ +NP I++ R+ V Q + V +K E+++ + Sbjct: 175 ERQTVLFSATLAPPILALAKRFQNNPEIIKIERKELTISTVEQFYYLVKNSQKTEIVTQI 234 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I N Q +L+F TK + ++L G ++HG+K+Q RT ++ F+ G +L Sbjct: 235 IDLNNLQLMLIFCNTKRKVEEVTDELKAYGHNPISLHGDKTQRDRTEVMSKFRKGLANIL 294 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+ + V+NY++P E+YVHRIGRTGRA G++ +LV DE LRD Sbjct: 295 VATDVAARGIDVTGVDAVINYDVPLDIENYVHRIGRTGRAGQLGKSFTLVTSDEKYKLRD 354 Query: 360 IEKLLKKEIPRIAIP 374 IE+ K I + P Sbjct: 355 IERYTKATIEKAETP 369 >UniRef50_C1IBN1 DEAD-box ATP dependent DNA helicase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBN1_9CLOT Length = 526 Score = 293 bits (750), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 152/375 (40%), Positives = 229/375 (61%), Gaps = 8/375 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F +LGL +L+++ + G+ +P+ IQ +AIP ++G DL+ AQTGTGKTA F ++ Sbjct: 4 IKFSNLGLKDTLLKSINDLGFEKPSQIQAEAIPVAIQGYDLIGQAQTGTGKTAAFGCGII 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + + A+IL PTRELA Q+ + ++ SKY ++ L V+GG I Q+ Sbjct: 64 NHI-------SKKSGLSAIILAPTRELAIQVNDELKRLSKYDDLTILPVYGGDPITNQIR 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ V+++V TPGR+LD + +KLDQ++ LVLDEAD ML+MGFI D+ ++ +LP++ Sbjct: 117 ALKRNVNIVVGTPGRVLDHIKRGTIKLDQIKFLVLDEADEMLNMGFIDDLEDIIKQLPSE 176 Query: 181 RQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ LLFSAT D I+ LA++ + + I + + + ++Q+ V K + E L + Sbjct: 177 RQTLLFSATMPDQIRKLAKRYMKPDAKHISIKKTSMTVSTISQNFFEVSHKTRFEALCRV 236 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++F RTK G + L E + G +HG+ SQ R R L FK G + L Sbjct: 237 LDFDTPSSAIIFCRTKKGVDELVEGMQSRGYVVEGMHGDMSQAHRLRTLKKFKEGSLNYL 296 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+E + HV+NY+LP E YVHRIGRTGRA G A SLV E+ +L+ Sbjct: 297 VATDVAARGIDVEGITHVINYDLPQDVESYVHRIGRTGRANREGIAYSLVSPKEYSMLKQ 356 Query: 360 IEKLLKKEIPRIAIP 374 I+ + K +I R IP Sbjct: 357 IKSVTKSDISRKNIP 371 >UniRef50_C5S7U5 DEAD/DEAH box helicase domain protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7U5_CHRVI Length = 662 Score = 293 bits (750), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 160/375 (42%), Positives = 229/375 (61%), Gaps = 7/375 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + FD+LGLSP I +AV GY PT IQ Q IP +L GRDL+ AQTGTGKTA F LP+L Sbjct: 9 VGFDALGLSPVIAQAVKNLGYESPTAIQSQCIPHLLAGRDLLGQAQTGTGKTAAFALPML 68 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 L R+P + L+LTPTRELA Q+ E + Y+ L L ++GG Q+ Sbjct: 69 SRL-----DPDLRKP-QVLVLTPTRELALQVAEAFQRYATDLKGFNVLPIYGGQGYGLQL 122 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 +L+ V+V TPGR++D + + LD + LVLDEAD ML+MGF DI + + PA Sbjct: 123 SQLKRNPQVIVGTPGRVMDHIRRGTLALDSIRALVLDEADEMLNMGFAEDIDWIFDQAPA 182 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ LFSAT I+ +A+ L +P+E+++A + D + QH V + K ++L+ + Sbjct: 183 ERQVALFSATMPPAIRRVAQTRLVDPVEVKIAANSETVDTIEQHHCIVTRFHKLDVLTRI 242 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + +L+F RTK+ LA++L G + ++G+ +Q R R + K G + VL Sbjct: 243 MELEPFDGLLIFVRTKNATTELADKLKAHGFAAEPLNGDMNQEMRERTVERLKQGQLDVL 302 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD+E + HVVNY++P P YVHRIGRTGRA G A+ LV E LL+ Sbjct: 303 VATDVAARGLDVERISHVVNYDIPTDPSAYVHRIGRTGRAGRAGRAILLVEPRERGLLKS 362 Query: 360 IEKLLKKEIPRIAIP 374 IE+++++ IP + P Sbjct: 363 IERVIRRPIPSMEPP 377 >UniRef50_A6TTG0 DEAD/DEAH box helicase domain protein n=28 Tax=Firmicutes RepID=A6TTG0_ALKMQ Length = 549 Score = 293 bits (749), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 148/366 (40%), Positives = 226/366 (61%), Gaps = 6/366 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LG+S +I + + EPTP+Q QAIP +L RD+MA AQTGTGKT F LP+L+ Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + +P ++ALI+TPTRELA QI + ++ I L +GG + Q+ KL Sbjct: 65 VNVEKPT------IQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKL 118 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 +G + +++ TPGRLLD + + L ++ +LVLDEAD+ML MGF+ D+ ++T +P +RQ Sbjct: 119 KGSIHIIIGTPGRLLDHLRRKTINLGKLSMLVLDEADQMLHMGFLRDVEDIMTHIPKRRQ 178 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 N+ FSAT + ++ LAE+ + +P++I+V + D++ Q V + K++LL + + Sbjct: 179 NMFFSATMPNQVRTLAEQYMKDPVQIQVQSKRVTLDEIRQVVIETTDRGKQDLLCQLFDE 238 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 N ++F RTK A L E L G S +HG+ +Q R + + FK I+ LVAT Sbjct: 239 YNPFMAIIFCRTKRRAIALNEALINLGYNSDELHGDLTQAKREKVMKAFKKSKIQYLVAT 298 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARGLDIE + H+ NY++P E Y+HRIGRTGRA TG A++ + + L+ IEK Sbjct: 299 DVAARGLDIEGVTHIFNYDIPQDGESYIHRIGRTGRAGETGMAITFMTSRDRDELKIIEK 358 Query: 363 LLKKEI 368 ++K ++ Sbjct: 359 VIKMDL 364 >UniRef50_D2RJY3 DEAD/DEAH box helicase domain protein n=2 Tax=Firmicutes RepID=D2RJY3_ACIFE Length = 544 Score = 292 bits (748), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 150/373 (40%), Positives = 230/373 (61%), Gaps = 8/373 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF+ L L IL A+ E G+ EP+PIQ+ AIP LEG DL+ AQTGTGKTA F +P++Q Sbjct: 20 SFEDLNLDRKILAALKEMGFEEPSPIQKGAIPMALEGEDLIGQAQTGTGKTAAFGIPIIQ 79 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + + H ++AL+++PTREL Q+ + + K IR L V+GG I Q+ Sbjct: 80 KINEKDRH------IQALVMSPTRELCIQVADEISKIGKTKRIRVLPVYGGQPIERQIRS 133 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G+ V++ TPGRLLD + + L+ V LVLDEAD MLDMGF+ D+ ++ +P +R Sbjct: 134 LKRGIQVVIGTPGRLLDHIRRGTIDLEYVNFLVLDEADEMLDMGFVDDMENIIKNVPPER 193 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q +LFSAT I ++++K + P + + + + + Q+ + + + K + L ++ Sbjct: 194 QTMLFSATMPRPILSISKKYMRAPKVVAIHKEVVTAPTIDQY--YYETRDKVDGLCRILD 251 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + ++++F RTK G + L L G + +HG+ SQ R R + F+SG + +LVA Sbjct: 252 TTDDCKMIIFCRTKKGVDELVIALATRGYEAEGLHGDLSQNQRDRVMKKFRSGQVDILVA 311 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLDI+ + HVVN+++P+ E YVHRIGRTGRA TG AL+ + E + L+ IE Sbjct: 312 TDVAARGLDIDNITHVVNFDVPSDSESYVHRIGRTGRAGNTGVALTFITPREFRQLKLIE 371 Query: 362 KLLKKEIPRIAIP 374 + +K +I R +P Sbjct: 372 RSIKTKIIRGTLP 384 >UniRef50_D1B4W7 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=D1B4W7_SULD5 Length = 583 Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 149/374 (39%), Positives = 229/374 (61%), Gaps = 7/374 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+S GL DIL+A+ E G+ EP+P+Q +AIP VL+G D++A AQTGTGKTA F LP + Sbjct: 3 TFESFGLHQDILKAINEAGFTEPSPVQAEAIPLVLQGHDIVAQAQTGTGKTAAFGLPTMS 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + Q V+ L++TPTRELA Q+ + + ++ I+++ ++GG S + Q+ Sbjct: 63 MIDANQNR------VQLLVITPTRELATQVSDELYSLGRFCGIKTVTIYGGSSYSRQIGL 116 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 + G V+VATPGR+LDL + +++VLDEAD MLDMGF+ DI + T LP +R Sbjct: 117 IEKGASVIVATPGRMLDLLKNGRLPGFAPKMVVLDEADEMLDMGFLEDIEEIFTYLPKER 176 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT + IK LA K+LH P + + ++ T ++ + Q + +++ + + + ++ Sbjct: 177 QTLLFSATMPEPIKRLASKILHEPKFVSITPKDHTTNEDIEQLYYVINEYERDDAMIRLL 236 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++ +VF RTK + L+ QL G + +HG+ Q R + F+S I +LV Sbjct: 237 DALEPEKSIVFCRTKKEVDRLSTQLMAVGYAAKGLHGDMEQNQRESVIKAFRSSQIEILV 296 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGL++ ++ HV NY +P PE YVHRIGRTGRA G A++LV E ++ I Sbjct: 297 ATDVAARGLNVADISHVFNYHMPFDPESYVHRIGRTGRAGKKGTAITLVTPIEFHSMQRI 356 Query: 361 EKLLKKEIPRIAIP 374 K + +I +P Sbjct: 357 GKKVGSKIEHRIVP 370 >UniRef50_Q8YXJ0 ATP-dependent RNA helicase n=24 Tax=Cyanobacteria RepID=Q8YXJ0_ANASP Length = 513 Score = 292 bits (747), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 155/375 (41%), Positives = 235/375 (62%), Gaps = 7/375 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF LG+S + + + + G+ PT IQ QAIP +L GRD++ +QTGTGKTA F+LP+L Sbjct: 3 LSFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPIL 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L +Q + V+A++LTPTRELA Q+ + + + +R+L ++GG SI+ QM+ Sbjct: 63 ERLDPQQ------KAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQML 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L+ GV ++V TPGR++DL + +KLDQV+ VLDEAD ML MGFI D+ ++L++ P Sbjct: 117 QLKRGVHIVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQD 176 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKR-KRELLSHM 239 RQ LFSAT I+ L K L +P+ + V + +++ Q + + + K L + Sbjct: 177 RQTALFSATMPPSIRMLVNKFLRSPVTVTVEQPKATPNKINQVAYLIPRHWTKARALQPI 236 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + + L+F RT+ A L QL G HG+ SQ AR R L F+S +R + Sbjct: 237 LEMEDPETALIFVRTRRTAAELTSQLQAAGHSVDEYHGDLSQQARERLLTRFRSRQVRWV 296 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARGLD+++L HV+NY+LP+ E YVHRIGRTGRA G A++LV E + + Sbjct: 297 VATDIAARGLDVDQLSHVINYDLPDSVETYVHRIGRTGRAGKEGTAITLVQPFERRKQQI 356 Query: 360 IEKLLKKEIPRIAIP 374 E+ +++ ++IP Sbjct: 357 FERHVRQNWQLLSIP 371 >UniRef50_C1FAF2 ATP-dependent RNA helicase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1FAF2_ACIC5 Length = 430 Score = 292 bits (747), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 157/373 (42%), Positives = 226/373 (60%), Gaps = 6/373 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L LS + +A + PTP+Q+ AIP +EG+D++A+AQTGTGKT GF LP + Sbjct: 1 MQFSELNLSSHLKNQLAVNQFVTPTPVQEAAIPPAMEGKDVLATAQTGTGKTLGFLLPAM 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L+ KG+ P LILTPTRELA Q+ + + ++ + GG S N Q+ Sbjct: 61 ERLLA----TKGKHPA-VLILTPTRELALQVEKQYAQLAGKSLPQAATLIGGASENNQIR 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ G ++VATPGRL D + + L ++E+LVLDEADRMLDMGFI IRR++ KLP + Sbjct: 116 DLKAGARLIVATPGRLEDFLERRLIDLKRIEVLVLDEADRMLDMGFIPAIRRIVAKLPRQ 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ + FSAT + L +++L NP+ + S V + VD +K L+ H + Sbjct: 176 RQTMCFSATIDPAVAHLLDEILTNPVRLSFGSTQQTSSSVRLIAYEVDADQKAALV-HRV 234 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 Q LVF TK H+A++L++ GI A +HG++SQ R RAL DF+ G RVLV Sbjct: 235 VTAEEGQSLVFVGTKRRTEHVAKRLDRAGISVAVLHGDRSQSQRNRALEDFQRGRARVLV 294 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+A+RG+ ++ + V+NY++P + ED++HR GRTGRA ATG A + E + Sbjct: 295 ATDVASRGIHVDNIAQVINYDMPKMTEDFIHRAGRTGRAGATGVAATFYTPLERREFNRF 354 Query: 361 EKLLKKEIPRIAI 373 EK L ++I R+ I Sbjct: 355 EKTLNRKIERVMI 367 >UniRef50_P0A9P7 Cold-shock DEAD box protein A n=201 Tax=Bacteria RepID=DEAD_ECOL6 Length = 629 Score = 291 bits (746), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 155/377 (41%), Positives = 228/377 (60%), Gaps = 7/377 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGL IL A+ + GY +P+PIQ + IP +L GRD++ AQTG+GKTA F+LPLLQ Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 +L P K + L+L PTRELA Q+ E + D+SK++ + + ++GG + Q+ Sbjct: 67 NL---DPELKA---PQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR 120 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR G ++V TPGRLLD + + L ++ LVLDEAD ML MGFI D+ ++ ++P Sbjct: 121 ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG 180 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LFSAT + I+ + + + P E+ + T ++Q V RK E L + Sbjct: 181 HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL 240 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++ ++F RTK+ +AE L ++G SAA++G+ +Q R + L K G + +L+ Sbjct: 241 EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI 300 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD+E + VVNY++P E YVHRIGRTGRA G AL V E +LLR+I Sbjct: 301 ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360 Query: 361 EKLLKKEIPRIAIPGYE 377 E+ +K IP + +P E Sbjct: 361 ERTMKLTIPEVELPNAE 377 >UniRef50_D1H3Q8 Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=14 Tax=Viridiplantae RepID=D1H3Q8_VITVI Length = 568 Score = 291 bits (746), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 155/373 (41%), Positives = 234/373 (62%), Gaps = 11/373 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF +GL I++ + Y PT IQ QA+P L GRDL+ A+TG+GKTA F +P++Q Sbjct: 124 SFTDMGLHQSIMKDITFHEYTRPTFIQAQAMPVALSGRDLLGCAETGSGKTAAFAIPMIQ 183 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMM 120 H + + P +G P+ AL+L PTRELA QI + V+ +S+ L+ R+ +V GG +I+ Q Sbjct: 184 HCLAQPPVRRGDGPL-ALVLAPTRELAQQIEKEVKAFSRSLDSFRTAIVVGGTNISEQRS 242 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +LR GV+++VATPGR + + L ++ +VLDEADRMLDMGF IR V+ LP K Sbjct: 243 ELRAGVNIVVATPGRFIHHLQEGNTSLSRISFVVLDEADRMLDMGFEPQIREVMQNLPQK 302 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRE-LLSHM 239 Q LLFSAT +I+ LA++ L+NP++++V + + + V+Q + V + K + LL+ + Sbjct: 303 HQTLLFSATMPMEIETLAQEYLNNPVQVKVGKVSCPTANVSQILEKVSESEKIDGLLALL 362 Query: 240 IGKGNWQQ--------VLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADF 291 + + + + +VF K + +AE L G+R+ A+HG +SQ R AL DF Sbjct: 363 VEEASQAERCGRPFPLTIVFVERKTRCDEVAEALVAQGLRAVALHGGRSQAEREAALRDF 422 Query: 292 KSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCV 351 ++G +LVATD+A+RGLD+ + HV+N +LP E+YVHRIGRTGRA +TG+A S Sbjct: 423 RNGATNILVATDVASRGLDVTGVAHVINLDLPKAMENYVHRIGRTGRAGSTGQATSFYTD 482 Query: 352 DEHKLLRDIEKLL 364 + L+ I K + Sbjct: 483 RDVFLVAHIRKAI 495 >UniRef50_O97032 DjVLGB (Fragment) n=1 Tax=Dugesia japonica RepID=O97032_DUGJA Length = 781 Score = 291 bits (746), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 159/374 (42%), Positives = 230/374 (61%), Gaps = 10/374 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD L L P I + Y+ PTPIQ+ AIPA+LE RD+MA AQTG+GKTA F +P++ Sbjct: 185 NFDELKLDPTIRNNILLASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTAAFLIPIIN 244 Query: 62 HLITR----QPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINP 117 HL+ + Q ++K P + LIL PTRELA QI + +S +RS VV+GG + Sbjct: 245 HLVCQDLNQQRYSKTAYP-KCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHS 303 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVL--T 175 Q+ +++ G +LVATPGRL+D +N + L+ + +VLDEADRMLDMGF IR+++ + Sbjct: 304 QIREVQMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLDEADRMLDMGFEPQIRKIIEES 363 Query: 176 KLPA--KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKR 233 +P+ RQ L+FSATF +I+ LA L+N + + V R + SD + Q + ++ K Sbjct: 364 NMPSGINRQTLMFSATFPKEIQKLAADFLYNYIFMTVGRVGSTSDSIKQEIIYMTDVEKL 423 Query: 234 ELLSHMIGKGNWQQ-VLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFK 292 L ++ +L+F TK GA+ LA L G ++IHG++SQ R AL+ F+ Sbjct: 424 NYLKNIFNTTAPNTLILIFVETKKGADSLARFLLSKGYPVSSIHGDRSQVEREAALSMFR 483 Query: 293 SGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVD 352 +G +LVAT +AARGLDI + HV+NY+LP+ E+YVHRIGRTGR G A S Sbjct: 484 NGQCPILVATAVAARGLDIPNVKHVINYDLPSDIEEYVHRIGRTGRLGNHGRATSFYVDK 543 Query: 353 EHKLLRDIEKLLKK 366 + + D+ LLK+ Sbjct: 544 NNNIAIDLVDLLKE 557 >UniRef50_C6WM51 DEAD/DEAH box helicase domain protein n=83 Tax=Actinobacteria (class) RepID=C6WM51_ACTMD Length = 609 Score = 291 bits (745), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 166/375 (44%), Positives = 231/375 (61%), Gaps = 18/375 (4%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LG+ +I+RA+ E G IQ+ +P L G D++ A+TGTGKT GF +PLLQ Sbjct: 53 TFTELGVREEIVRALGEAGIERAFAIQELTLPLALAGEDVIGQARTGTGKTLGFGIPLLQ 112 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 +IT G +AL++ PTREL Q+ ++ D SK++++R L ++GG PQ+ Sbjct: 113 RVIT-----PGDGTPQALVVVPTRELCLQVTHDLTDASKHMDVRVLAIYGGRPYEPQIAA 167 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GVDV+V TPGRLLDL Q + L +V LVLDEAD MLD+GF+ DI RVL +P +R Sbjct: 168 LRKGVDVVVGTPGRLLDLAEQRHLVLGKVRSLVLDEADEMLDLGFLPDIERVLRMVPDER 227 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTA------SDQVTQHVHFVDKKRKREL 235 Q +LFSAT I LA L+ P + A N A ++Q H +DK EL Sbjct: 228 QTMLFSATMPGPIITLARTFLNQPTHVR-AEENDAGAVHERTEQFIYRAHALDKV---EL 283 Query: 236 LSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295 L+ ++ + ++FTRTK A +A+ + + G AA+HG+ QGAR +AL F+SG Sbjct: 284 LARVLQARDRGLSMIFTRTKRTAQKVADDMAERGFAVAAVHGDLGQGAREQALRAFRSGK 343 Query: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDE-- 353 I VLVATD+AARG+D+E + HVVNY+ P + YVHRIGRTGRA TG A++LV DE Sbjct: 344 IDVLVATDVAARGIDVEGVTHVVNYQCPEDEKTYVHRIGRTGRAGRTGVAVTLVDWDEIP 403 Query: 354 -HKLLRDIEKLLKKE 367 +++ D L K++ Sbjct: 404 RWQMISDALNLGKRD 418 >UniRef50_Q11039 Cold-shock DEAD box protein A homolog n=27 Tax=Bacteria RepID=DEAD_MYCTU Length = 563 Score = 291 bits (745), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 154/379 (40%), Positives = 227/379 (59%), Gaps = 13/379 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L + P +LRA+ + GY PT IQ IPA++ G D++ AQTGTGKTA F +P+L Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73 Query: 62 HL--ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQ 118 + ++ P +AL+L PTRELA Q+ E Y YL+ + L ++GG S Q Sbjct: 74 KIDITSKVP--------QALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQ 125 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 + LR G V+V TPGR++D + + L +V+ LVLDEAD ML MGF D+ R+L++ P Sbjct: 126 LAGLRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETP 185 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 +Q LFSAT I+ L+ K LH+P E+ + ++ ++Q ++ RK + L+ Sbjct: 186 EYKQVALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQS--YIQVARKMDALTR 243 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ ++ ++VF RTK +AE+L G +AAI G+ Q R R + + GDI + Sbjct: 244 VLEVEPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDI 303 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLD+E + HV+NY++P+ E YVHRIGRTGRA +G AL V E LL+ Sbjct: 304 LVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLK 363 Query: 359 DIEKLLKKEIPRIAIPGYE 377 IEK ++ + +P E Sbjct: 364 AIEKATRQTLTEAQLPTVE 382 >UniRef50_P44586 Cold-shock DEAD box protein A homolog n=29 Tax=Pasteurellaceae RepID=DEAD_HAEIN Length = 613 Score = 291 bits (745), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 151/377 (40%), Positives = 230/377 (61%), Gaps = 7/377 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+ LGL IL+AV++ G+ P+PIQQ IP +L G D++ AQTG+GKTA F LPLL Sbjct: 5 ITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLL 64 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 + + H + L++ PTRELA Q+ + + KY R + ++GG + Q+ Sbjct: 65 AQIDPSEKHPQ------MLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQL 118 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ G V+V TPGR+LD + + L ++ +VLDEAD ML MGFI D+ V+ +LP Sbjct: 119 RALKQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPE 178 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 Q LFSAT + I+ + ++ +++P E+++ N + + Q +V RK E L Sbjct: 179 NHQTALFSATMPEPIRRITKRFMNDPQEVKIKVNNENAPDIDQSCWYVHGVRKNEALLRF 238 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++ ++F RTK G + E L K+G RSAA++G+ +Q R + L ++G + ++ Sbjct: 239 LEVEDFDAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDIV 298 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+DIE + VVNY++P E YVHRIGRTGRA +G AL V E +LLR+ Sbjct: 299 VATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLRN 358 Query: 360 IEKLLKKEIPRIAIPGY 376 IE L+KK I + +P + Sbjct: 359 IEHLMKKGINEVELPNH 375 >UniRef50_C4R557 RNA helicase in the DEAD-box family, necessary for prespliceosome formation n=1 Tax=Pichia pastoris GS115 RepID=C4R557_PICPG Length = 784 Score = 291 bits (745), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 158/412 (38%), Positives = 246/412 (59%), Gaps = 11/412 (2%) Query: 6 LGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLIT 65 L L + + + Y PTPIQ +A+P ++ G+DL+ A+TG+GKT F LP+ + +I+ Sbjct: 220 LALPQQFMSVIEDLKYEAPTPIQSEALPNLMSGKDLIGIAKTGSGKTLAFLLPMFRQIIS 279 Query: 66 RQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGG 125 + G P+ +ILTPTRELA QI + + + K LN++ + V+GG SI+ Q+ ++ Sbjct: 280 QPDPESGEGPI-GVILTPTRELALQIFKECKPFMKSLNLKGICVYGGASISQQISDIKKR 338 Query: 126 VDVLVATPGRLLDLEHQNA---VKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 V V TPGRL+DL N+ L + LVLDEADRM DMGF + +++ RQ Sbjct: 339 VHFAVCTPGRLIDLLTANSGRVTNLSRTSYLVLDEADRMFDMGFEPQVMKIIPNTRPDRQ 398 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKR----ELLSH 238 L+FSATF ++ALA+K+L+NPLE+ V ++ +D +TQ V +D + + ELL Sbjct: 399 TLVFSATFPPKMEALAKKVLNNPLEVIVGEKSVVADTITQKVFVIDPQERFSKLLELLGT 458 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 K +VLVF + A+ L L K G + ++HG K Q R + DFK+G+ + Sbjct: 459 FKSKDPTGKVLVFVERQDSADVLLTNLLKRGYNAQSLHGGKEQMDRDFIIQDFKTGNSDI 518 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVAT +AARGLD++ L V+NY+ PN EDYVHR+GRTGRA +TGEA++ + +++ Sbjct: 519 LVATSVAARGLDVKRLNLVINYDSPNHMEDYVHRVGRTGRAGSTGEAVTFLTAKDYRAAY 578 Query: 359 DIEKLLKKEIPRIAIP-GYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQ 409 D+ + LK + + +P + ++ E ++ G +RG G G+G + Q++ Sbjct: 579 DVSRALK--VSKQLVPDNVQAVANVFIEQLKTGSAKRGSGYGGKGLEKLQEE 628 >UniRef50_C9RIQ5 DEAD/DEAH box helicase domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RIQ5_FIBSS Length = 802 Score = 291 bits (744), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 153/378 (40%), Positives = 232/378 (61%), Gaps = 7/378 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++FD LGLSP++L AV GY P+PIQ +AIPA+L+G +L+ +AQTGTGKTA F+LPLL Sbjct: 124 VTFDDLGLSPEVLEAVKLAGYETPSPIQAKAIPALLQGANLLGTAQTGTGKTAAFSLPLL 183 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYS-KYLNIRSLVVFGGVSINPQM 119 + + GR L+LTPTRELA Q+ + ++ Y+ K N+ + V+GG I Q+ Sbjct: 184 SRI-----NFNGRE-TSMLVLTPTRELAIQVSDAIQQYAVKMQNVTVVPVYGGQDIAIQL 237 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ ++VATPGRL+D + ++ L V+ +VLDEAD MLDMGF+ D+ +L ++PA Sbjct: 238 RALKRKASIVVATPGRLIDHIKRGSISLGAVKAIVLDEADEMLDMGFMEDVETILKEIPA 297 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 Q LFSAT D +K + ++ L E + + T + + Q V + K E L+ + Sbjct: 298 DAQRALFSATMPDSVKKIIDQHLGEYEEARIEGKTTTVENICQRYLLVKNEHKIEALARV 357 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + VL+F RTK +AE+L G A ++G+ +Q R R + K G + ++ Sbjct: 358 LEGEEFDGVLIFVRTKQNTTEVAEKLESRGFNVAPLNGDLAQSMRERTINRLKMGKLDIV 417 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D++ + VVNY++P E YVHRIGRTGRA +G A+ + E ++L+ Sbjct: 418 VATDVAARGIDVDRISLVVNYDIPYDTESYVHRIGRTGRAGRSGNAILFITPREKRMLKT 477 Query: 360 IEKLLKKEIPRIAIPGYE 377 IEK ++ I + +P E Sbjct: 478 IEKATRQPIDVMEMPTSE 495 >UniRef50_D1I3Q7 Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1I3Q7_VITVI Length = 916 Score = 291 bits (744), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 163/379 (43%), Positives = 229/379 (60%), Gaps = 20/379 (5%) Query: 7 GLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITR 66 GL+ +I R Y +PTPIQ+ AIP + GRDLMA AQTG+GKTA F P++ ++ Sbjct: 431 GLNQNIRRC----KYVKPTPIQRHAIPIAMAGRDLMACAQTGSGKTAAFCFPIICGILRN 486 Query: 67 QPHAKGRRPV--RALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRG 124 Q G R ALIL+PTREL+ QI E + +S ++ +V +GG I+ Q L Sbjct: 487 QLSRGGARLACPTALILSPTRELSCQIHEEAKKFSYKTGLKVVVAYGGAPISQQFRNLER 546 Query: 125 GVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL----PAK 180 GVD+LVATPGRL+D+ + V L ++ L LDEADRMLDMGF IR+++ ++ P Sbjct: 547 GVDILVATPGRLVDMIERARVSLRMIKYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGA 606 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRE-----L 235 RQ +LFSATF ++I+ LA L N + + V R +++D + Q V FV+ KR L Sbjct: 607 RQTMLFSATFPNEIQRLAADFLSNYIFLSVGRVGSSTDLIVQRVEFVEDTDKRYHLMDLL 666 Query: 236 LSHMIGKG--NWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKS 293 S M + + LVF TK G + L + L +G+ + AIHG+K Q R RAL FKS Sbjct: 667 QSQMTNRTPKKYALTLVFVETKRGVDALEQWLCMNGLAATAIHGDKVQMERERALKSFKS 726 Query: 294 GDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDE 353 G ++VATD+AARGLDI + HV+N++LP +DYVHRIGRTGRA +G A + Sbjct: 727 GATPIMVATDVAARGLDIPHVAHVINFDLPKAIDDYVHRIGRTGRAGKSGLATAFFNDGN 786 Query: 354 HKLLRDIEKLLK---KEIP 369 L + + +L++ +E+P Sbjct: 787 LSLAKSLVELMQESNQEVP 805 >UniRef50_A2SJY2 Putative ATP-dependent RNA helicase n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SJY2_METPP Length = 516 Score = 290 bits (743), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 163/401 (40%), Positives = 234/401 (58%), Gaps = 25/401 (6%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+SLGL+ +L AV + G+ PT +Q+QAIPA L+G D M S+QTG+GKTA F LP+L Sbjct: 75 NFESLGLAAPLLHAVTQLGFTAPTSVQEQAIPAALKGGDWMVSSQTGSGKTAAFLLPVLH 134 Query: 62 HLITRQPHAKGRRPV-RALILTPTRELAAQIGEN--------------------VRDYSK 100 L+ + R RA++L PTRELA Q+ + +RD ++ Sbjct: 135 RLLNAGAAEQTRVATPRAVVLCPTRELAQQVSADAIDLMRGVGEALRAEAKQHPLRDAAR 194 Query: 101 YLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADR 160 L I ++V GG+ Q+ LRG ++VATPGRLLDL + ++LD ++LV+DEADR Sbjct: 195 GLRIATVV--GGMPFGKQLFDLRGA-QLVVATPGRLLDLHSRGQIRLDATQVLVVDEADR 251 Query: 161 MLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQV 220 MLD+GF D+ + + Q ++FSATF+ I ALA KL+ +P +E+A + + Sbjct: 252 MLDLGFAEDLAAIADATAQRDQTMMFSATFAPRIMALASKLMRSPGRLELATAHDVHSDI 311 Query: 221 TQHVHFVDKK-RKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNK 279 TQ +H+ D K+ LL H + Q +VF T+ +AE L + G + A+HG Sbjct: 312 TQTLHWADNMGHKQALLEHWLRDAEVDQAVVFASTQVDTEAIAEALQQQGHSAVALHGAM 371 Query: 280 SQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRA 339 Q R R L + + G +RVLVATD+AARGLD+ + HV+N+ LP EDYVHRIGRTGRA Sbjct: 372 PQAVRNRRLQNVRDGHVRVLVATDVAARGLDVPSISHVINFGLPMKAEDYVHRIGRTGRA 431 Query: 340 AATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDP 380 +G A+++ E +R IE ++ I I G EP P Sbjct: 432 GRSGTAITIAEHRERGKIRAIEAFTRQPIEASVIVGLEPTP 472 >UniRef50_B8FMI0 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMI0_DESAA Length = 567 Score = 290 bits (743), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 153/364 (42%), Positives = 229/364 (62%), Gaps = 8/364 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEG-RDLMASAQTGTGKTAGFTLPL 59 M F LGLS ++ RAV G+ +PTPIQ++AIP ++EG RD + AQTGTGKT + LPL Sbjct: 1 MDFRILGLSDELARAVESLGFEKPTPIQEKAIPYLIEGERDFVGLAQTGTGKTGAYGLPL 60 Query: 60 LQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQ 118 +Q + P RP +A+++ PTREL QI ++RD++KY+ +IR V+GG I Q Sbjct: 61 IQSIDLSIP-----RP-QAIVICPTRELCLQIAGDLRDFAKYMEDIRVAAVYGGADIVKQ 114 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 + ++GG ++ ATPGRLLDL ++ A+K V +VLDEAD ML+MGF DI +L+ LP Sbjct: 115 IRTVKGGAQIIAATPGRLLDLINRKAIKPGHVTRVVLDEADEMLNMGFQEDINAILSSLP 174 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 +R+ LFSAT + A+A K NP+E+ + RN AS ++ + + K + L Sbjct: 175 DERRTWLFSATMPKGVAAIAAKYQTNPVEVTMGGRNQASPDISHICYMIHAKNRYAALKR 234 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ LVF RT+ +AE L DG + A+HG+ SQ R + + F+ ++V Sbjct: 235 ILDYCPDMFGLVFCRTRKDTQEIAEALMADGYNADALHGDLSQPQRDQVMGRFRRKAVQV 294 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 L ATD+AARGLD++++ HV++Y LP+ PE Y HR GRT RA G++++L+ E+ L+ Sbjct: 295 LAATDVAARGLDVDDISHVIHYVLPDDPEAYTHRSGRTARAGKQGKSIALITPRENYRLK 354 Query: 359 DIEK 362 D+E+ Sbjct: 355 DLER 358 >UniRef50_B4U778 DEAD/DEAH box helicase domain protein n=2 Tax=Aquificaceae RepID=B4U778_HYDS0 Length = 364 Score = 290 bits (743), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 153/358 (42%), Positives = 227/358 (63%), Gaps = 8/358 (2%) Query: 8 LSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQ 67 LS ++ +A+ + GY+EPTPIQ+ AIP LEG D++ A TGTGKT F +P+++ L Sbjct: 7 LSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKL---- 62 Query: 68 PHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRG-GV 126 KG+ V+AL+LTPTRELA Q+ E + +KY + S V +GG S+ + L+ V Sbjct: 63 --QKGKPDVKALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQNKNV 120 Query: 127 DVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLF 186 D+L+ TPGR+ DL + A+ L +VE LVLDE D+MLDMGFI DI +++ LP +R +F Sbjct: 121 DILIGTPGRIKDLIDRKALNLSKVEYLVLDEFDQMLDMGFIEDIEYIISFLPKERTTYMF 180 Query: 187 SATFSDDIKALAEKLLHNPLE-IEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNW 245 SAT I+ LA++ L + + ++V + + + K L H+I Sbjct: 181 SATVPSRIELLAKRFLKSDFKFVKVQSVELKPNIEEKMIKLSSPGEKIHELMHIIDTHPM 240 Query: 246 QQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIA 305 +++L+F +TK A L L K GIR+ A+HG+ +Q R +AL+ FKSG + +L+ATD+A Sbjct: 241 EKMLIFVKTKKDAKDLFFLLTKKGIRAQALHGDLTQRQREKALSAFKSGAVSILIATDVA 300 Query: 306 ARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKL 363 ARGLDI+++ V+NY +P PE Y+HRIGRTGR +G+A SL+C ++ K L I+KL Sbjct: 301 ARGLDIKDVGVVINYNIPEDPELYIHRIGRTGRIGKSGKAFSLICPEDSKALWRIKKL 358 >UniRef50_A6DML6 ATP-dependent RNA helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DML6_9BACT Length = 542 Score = 289 bits (740), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 166/417 (39%), Positives = 244/417 (58%), Gaps = 12/417 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F S+ L P + RA+ E ++ TP+Q+ +P L+G+D+ A AQTGTGKTA F + + Sbjct: 116 AFLSMDLCPAVQRAIHEMDFKFCTPVQEGVLPISLKGQDVAAKAQTGTGKTAAFLISMYN 175 Query: 62 HLITR-QPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H + Q K P RALIL PTRELA QIG + KY +IR FGG+ + Q Sbjct: 176 HFVNNPQTEVKAGTP-RALILAPTRELALQIGADAEGLGKYCDIRVETFFGGMDFDKQAQ 234 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA- 179 LRG VD+ VATPGRL+D + + L +VE L +DEADRMLDMGFI D+R+++ LP Sbjct: 235 ILRGRVDIAVATPGRLMDYHRRKMINLREVEFLCIDEADRMLDMGFIPDVRKIVGYLPGR 294 Query: 180 -KRQNLLFSATFSDDIKALAEKLLHNPLE-IEVARRNTASDQVTQHVHFVDKKRKRELLS 237 KR L+SAT + + LA L+ E +E+ S V Q V+ V +K ++ Sbjct: 295 DKRITQLYSATLNQSVLNLAASWLNEKYEKVEINPETIVSKNVDQKVYTVTANQKENVIL 354 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGI-RSAAIHGNKSQGARTRALADFKSGDI 296 + +++++F K LA++L + G+ + + G+ Q R R L +F+SG + Sbjct: 355 WHLKNEEVKRMIIFANRKFDCERLADKLYQYGVDKLELLTGDVPQKKRMRILEEFRSGKV 414 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 +VLVATD+A RG+ ++++ HVVNYELP PEDYVHR+GRTGRA+A G+A+S + Sbjct: 415 QVLVATDVAGRGIHVDDVSHVVNYELPYEPEDYVHRVGRTGRASALGKAISFADENSGFE 474 Query: 357 LRDIEKLLKKEIP-RIAIPGYEPDPSIKAEPIQNGRQQRGG----GGRGQGGGRGQQ 408 L +IE ++ ++P + + G D K + Q+RGG G R +GG R Q+ Sbjct: 475 LPEIECYIEMQLPAEVPLEGMTDDHD-KKHSERKFAQKRGGNKHSGNRNKGGSRHQE 530 >UniRef50_Q9M2F9 DEAD-box ATP-dependent RNA helicase 52 n=13 Tax=Eukaryota RepID=RH52_ARATH Length = 646 Score = 289 bits (740), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 161/368 (43%), Positives = 224/368 (60%), Gaps = 20/368 (5%) Query: 21 YREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVR--- 77 Y +PTP+Q+ AIP + GRDLMA AQTG+GKTA F P++ ++ Q H + R VR Sbjct: 166 YVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQ-HIERPRGVRGVY 224 Query: 78 --ALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGR 135 A+IL+PTRELA QI + R +S ++ +V +GG +N Q+ +L GVD+LVATPGR Sbjct: 225 PLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGR 284 Query: 136 LLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL----PAKRQNLLFSATFS 191 L DL + V L V L LDEADRMLDMGF IR+++ ++ P RQ +LFSATF Sbjct: 285 LNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 344 Query: 192 DDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI-------GKGN 244 +I+ LA L N + + V R +++D + Q V FV KR L ++ +G Sbjct: 345 REIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGK 404 Query: 245 WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDI 304 LVF TK GA+ L L +G + IHG++SQ R AL FK+G +LVATD+ Sbjct: 405 QALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDV 464 Query: 305 AARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLL 364 AARGLDI + HVVN++LPN +DYVHRIGRTGRA +G A + + + + + +L+ Sbjct: 465 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELM 524 Query: 365 K---KEIP 369 + +E+P Sbjct: 525 QEANQEVP 532 >UniRef50_A4SWL3 DEAD/DEAH box helicase domain protein n=5 Tax=Proteobacteria RepID=A4SWL3_POLSQ Length = 500 Score = 289 bits (740), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 155/381 (40%), Positives = 227/381 (59%), Gaps = 6/381 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F + L+ +L+ VAE G+ + T +Q Q IPA L G DL+ S+QTG+GKTA F LPL+ Sbjct: 21 FQNFALAASLLKNVAELGFTQATSVQAQVIPAALAGGDLLVSSQTGSGKTAAFLLPLINQ 80 Query: 63 LITRQPHAK---GRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQ 118 LI P+ GR + L+L PTRELA Q+ + + + + IR V GG+ Q Sbjct: 81 LIEDNPNNSPVPGRAQPKVLVLCPTRELAQQVAADAVNLVRGMKGIRIATVMGGMPYGKQ 140 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 + L+G + ++VATPGRLLDL A++LD V+ LV+DEADRMLDMGF D+ + + Sbjct: 141 IQALKGAL-LVVATPGRLLDLCDSKAIRLDDVKQLVIDEADRMLDMGFADDLEAIDKRCA 199 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLS 237 + Q L+FSATF+ I +LA +L + IE+A + Q +H+ D K +LL Sbjct: 200 GRNQTLMFSATFAPKIMSLANELTTDAKRIELAHAGEKHANIEQKLHWADSMSHKHKLLE 259 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 H++ Q +VF T+ + +A+ L +G ++A+HG Q R R L + G + Sbjct: 260 HILADATLDQAVVFASTQVESEKIADTLRANGYEASALHGAMPQAVRMRRLESLRKGHTK 319 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVATD+AARG+D+ + HV+N+ LP PEDY HRIGRTGRA G A++LV + + Sbjct: 320 ILVATDVAARGIDVPRISHVINFGLPMKPEDYTHRIGRTGRAGRNGVAITLVEHRDRAKI 379 Query: 358 RDIEKLLKKEIPRIAIPGYEP 378 R+IE+ +++I I G EP Sbjct: 380 RNIERFTQQDIVASVIAGLEP 400 >UniRef50_Q5L3G9 DEAD-box ATP-dependent RNA helicase cshA n=94 Tax=Firmicutes RepID=CSHA_GEOKA Length = 467 Score = 289 bits (740), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 152/373 (40%), Positives = 229/373 (61%), Gaps = 6/373 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS ++++A+ G+ E TPIQ + IP L+ +D++ AQTGTGKTA F +P+++ Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + + V+AL++ PTRELA Q+ E + +R L ++GG I Q+ Sbjct: 63 KVNVKNS------AVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRA 116 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ V+V TPGR++D ++ ++L+ V +VLDEAD ML+MGFI DI +L+ +PA+R Sbjct: 117 LKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAER 176 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT D I+ +AE+ ++ P ++V + + Q+ V +K+K ++L+ ++ Sbjct: 177 QTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTRLLD 236 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +VF RTK + LAE LN G + IHG+ SQ R L FK G I +LVA Sbjct: 237 IQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVA 296 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLDI + HV N+++P PE YVHRIGRTGRA TG A++ V E L IE Sbjct: 297 TDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIE 356 Query: 362 KLLKKEIPRIAIP 374 + K+++ R+ P Sbjct: 357 RTTKRKMERMKPP 369 >UniRef50_Q65N62 DEAD-box ATP-dependent RNA helicase cshA n=135 Tax=Firmicutes RepID=CSHA_BACLD Length = 487 Score = 289 bits (740), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 152/374 (40%), Positives = 225/374 (60%), Gaps = 6/374 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F LS D+ +A+ G+ E TPIQ Q IP L +D++ AQTGTGKTA F +PL+ Sbjct: 3 ITFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLV 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + P+ ++A+++ PTRELA Q+ E + + R L ++GG I Q+ Sbjct: 63 EKINPESPN------IQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIR 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ ++V TPGRLLD ++ ++L V +VLDEAD ML+MGFI DI +L+ +PA+ Sbjct: 117 ALKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAE 176 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT IK +AE+ + NP ++V + + Q V +++K + L+ ++ Sbjct: 177 HQTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLL 236 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + +VF RTK + L E LN G + IHG+ +Q R AL FK G I VLV Sbjct: 237 DIQSPELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLV 296 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI + HV N+++P PE YVHRIGRTGRA TG A++ + E +LR I Sbjct: 297 ATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAI 356 Query: 361 EKLLKKEIPRIAIP 374 E+ K+++ R+ P Sbjct: 357 EQTTKRKMDRMKAP 370 >UniRef50_B1VFV5 ATP-dependent RNA helicase n=35 Tax=cellular organisms RepID=B1VFV5_CORU7 Length = 778 Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 149/376 (39%), Positives = 231/376 (61%), Gaps = 7/376 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LGLSP++ AV G+ +P+PIQ+Q IP ++ G D++ AQTGTGKTA F LP+L Sbjct: 133 FGDLGLSPEVFDAVRAVGFTKPSPIQEQTIPLLMAGEDVVGLAQTGTGKTAAFALPILSR 192 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMMK 121 L + K R+P +AL+L PTRELA Q+ E+ D+++ + + L ++GG Q+ Sbjct: 193 L-----NLKSRKP-QALVLAPTRELALQVAESFEDFAEKMGGVNILPIYGGQPYGAQLSG 246 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR G V+V TPGR++D + ++ + ++ +VLDEAD ML+MGF D+ R+L P + Sbjct: 247 LRRGAHVVVGTPGRVIDHLQKGSLDISELRFMVLDEADEMLNMGFQEDVERILEDTPEDK 306 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT I+ L+++ L++P E+ V ++ + Q V + K + L+ ++ Sbjct: 307 QVALFSATMPSAIRHLSKRYLNSPQEVTVKSTQRTAENIEQDYLIVHHREKLDALTRILE 366 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 ++ +++F RTK+ LAE+L G +AAI+G+ +Q R R + K G + +LVA Sbjct: 367 VTDFDAMIMFVRTKNDTEELAERLRARGYEAAAINGDIAQAQRERTVDQLKDGRLDILVA 426 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + HV NY++P E YVHRIGRTGRA +G A+ V E ++L+ IE Sbjct: 427 TDVAARGLDVERITHVFNYDIPRDTESYVHRIGRTGRAGRSGRAVLFVTPRERRMLKSIE 486 Query: 362 KLLKKEIPRIAIPGYE 377 + K + I +P + Sbjct: 487 RATKSRLNEIELPSVD 502 >UniRef50_Q1QAQ0 DEAD/DEAH box helicase-like n=5 Tax=Gammaproteobacteria RepID=Q1QAQ0_PSYCK Length = 384 Score = 288 bits (738), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 155/358 (43%), Positives = 227/358 (63%), Gaps = 7/358 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L LS LRAV++ G+ E TPIQ + +P L +D + AQTGTGKTA F L +++ Sbjct: 6 TFTDLPLSAATLRAVSDLGFTELTPIQAKILPHTLANQDAIGQAQTGTGKTATFLLTIME 65 Query: 62 HLITRQPHAKGRRPV---RALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 L+ R A R + RA+++ PTRELA QI ++ +KY ++ S+ + GG + Q Sbjct: 66 ALLKRPFAADEERHLGEPRAVVMAPTRELAQQIFDDCIALTKYTSLHSVCIMGGTNYETQ 125 Query: 119 MMKL-RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 +L R VD+L+ATPGRL+DL H+ V LD+VE+LVLDEADRMLDMGFI DI+R++ ++ Sbjct: 126 QHELERQYVDILIATPGRLIDLMHKGMVYLDRVEVLVLDEADRMLDMGFIPDIKRLVGRM 185 Query: 178 P--AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKREL 235 P RQ+LLFSATF+ D+ LA + LH P +E+ + S+ V QH + + + +K E Sbjct: 186 PPNTDRQSLLFSATFNQDVMGLAYRWLHEPEFVEIEPEHKTSELVDQHFYLLTEDQKLEA 245 Query: 236 LSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295 + +I ++V++F K L +L + G + + G+ Q R + L FK G Sbjct: 246 VERIITDSTVEKVIIFANRKDQVKRLYHKL-RQGHKIVMLSGDVIQQKREKYLQRFKDGH 304 Query: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDE 353 VLVATD+A RG+ ++++ HV+NY LP+ P+DYVHRIGRTGRA TG ++S V D+ Sbjct: 305 ASVLVATDVAGRGIHVDDVSHVINYTLPDQPDDYVHRIGRTGRAGQTGISISFVSEDD 362 >UniRef50_B7P029 Vasa n=9 Tax=Coelomata RepID=B7P029_9BIVA Length = 801 Score = 288 bits (738), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 150/359 (41%), Positives = 227/359 (63%), Gaps = 9/359 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF+ G+ + + + + +PTP+Q+ +IP V+ GRDLMA AQTG+GKTA F LP+L Sbjct: 353 SFEEAGIYDGFMTNLVKAHFEKPTPVQKYSIPIVMSGRDLMACAQTGSGKTAAFLLPVLT 412 Query: 62 HL----ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINP 117 + +T + + P +AL++ PTRELA QI + R +S +R +V++GG S+ Sbjct: 413 GMMKNGLTGSAFSDVQEP-QALVVAPTRELALQIFNDARKFSHGTMLRPVVLYGGTSVGY 471 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 Q+ ++ G ++V TPGRL+D+ ++ + L +++ L+LDEADRMLDMGF DI++++ +L Sbjct: 472 QLKQVENGAHIVVGTPGRLIDVINKGKISLAKLKYLILDEADRMLDMGFGPDIKKIVHEL 531 Query: 178 --PAK--RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKR 233 P K RQ L+FSATF ++I+ LA L++ L + V R A VTQH VD+++KR Sbjct: 532 GTPEKTERQTLMFSATFPEEIQKLAGDFLNDYLFLTVGRVGGACSDVTQHFFQVDRQQKR 591 Query: 234 ELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKS 293 + L ++ + + LVF K A+ LA L++ G + +IHG++ Q R AL DFK Sbjct: 592 QKLCDILSESGADKTLVFVEQKRNADFLASYLSESGFPTTSIHGDRLQREREEALRDFKQ 651 Query: 294 GDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVD 352 G +L+AT +AARGLDI + HV+NY+LP ++YVHRIGRTGR G+A S D Sbjct: 652 GKAPILIATSVAARGLDIPNVKHVINYDLPQSIDEYVHRIGRTGRCGNLGKATSFFSED 710 >UniRef50_D1AZN5 DEAD/DEAH box helicase domain protein n=2 Tax=Campylobacterales RepID=D1AZN5_SULD5 Length = 407 Score = 288 bits (738), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 153/372 (41%), Positives = 233/372 (62%), Gaps = 4/372 (1%) Query: 8 LSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQ 67 LS + +AV G+ PTPIQQ IP VLE +D++A A TG+GKTA F LP+L++ + Q Sbjct: 6 LSSPLQKAVHALGFTHPTPIQQSVIPLVLEHKDIVAKAHTGSGKTASFVLPILENW-SAQ 64 Query: 68 PHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVV--FGGVSINPQMMKLRGG 125 H +G+ +R L+LTPTREL Q+ E S +L+++ VV GG I Q+++++ G Sbjct: 65 TH-EGKARIRVLVLTPTRELCVQVAEAFVALSSFLHVKPKVVSVIGGEKIGEQLLEIQKG 123 Query: 126 VDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLL 185 D++VAT GRLLD+ ++ + L +V VLDEAD+MLD+GF ++ +L LP KRQNLL Sbjct: 124 CDIVVATSGRLLDILNKKQMDLSRVSFFVLDEADKMLDLGFEQELGLILESLPQKRQNLL 183 Query: 186 FSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNW 245 FSAT+ + ++ +A ++ +E+ + ++TQ V V+K+ + LL ++ + +W Sbjct: 184 FSATYPEKMQRIASRITPCAIEVSIEAEAPTLQRITQRVIEVNKENRAPLLRELLRENDW 243 Query: 246 QQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIA 305 VLVF K A+++A + K + + HG+ +Q RT L FK IRVL ATDIA Sbjct: 244 DLVLVFMANKRAADNIAVKFRKHSFLAESFHGDLAQEDRTWTLQSFKERKIRVLFATDIA 303 Query: 306 ARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLK 365 +RGLDI+++ V+N++LP EDY+HRIGRTGRA G A+SL+ ++ IEK Sbjct: 304 SRGLDIDDVSCVINFDLPRSSEDYIHRIGRTGRAGKEGLAISLIDHEDKAHFALIEKRCA 363 Query: 366 KEIPRIAIPGYE 377 ++ + I G+E Sbjct: 364 LKLTKEQIKGFE 375 >UniRef50_D2B0M6 Putative uncharacterized protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B0M6_STRRD Length = 697 Score = 288 bits (737), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 152/351 (43%), Positives = 222/351 (63%), Gaps = 6/351 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LG++P+I A+ +G P PIQ+ A+P L G+D++ A+TGTGKT F + +LQ Sbjct: 40 TFRDLGVTPEIADALETEGIITPFPIQEMALPLALNGQDIIGQARTGTGKTYAFGVAMLQ 99 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + +P K R+ R L++ PTRELA Q+ E++ + L R L V+GG + PQ+ Sbjct: 100 RV--GKPR-KNRKKPRGLVVVPTRELAVQVTEDLVTAAGKLGSRILTVYGGRAYEPQVEA 156 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GVDV+V TPGRLLDL Q + L Q+++LVLDEADRMLD+GF+ DI R++ +P KR Sbjct: 157 LKQGVDVIVGTPGRLLDLVKQKHLDLGQIDVLVLDEADRMLDLGFLPDIERIIKLIPEKR 216 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNT---ASDQVTQHVHFVDKKRKRELLSH 238 Q +LFSAT +I AL+ + L P + + A+ Q TQ V + K E++ Sbjct: 217 QTMLFSATLPGEIVALSRRYLTRPTHVRAENNDAEAEATPQTTQFVWRAHRMDKIEIVGR 276 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ ++F TK + + EQL + G +AA+HG+ QG R +AL F++G I V Sbjct: 277 LLQCDGRGLTMIFCETKRACDMVVEQLKERGFAAAAVHGDLGQGQREQALRAFRNGKIDV 336 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLV 349 LVATD+AARG+D++++ HVVNY+ P + YVHRIGRTGRA TG A++ V Sbjct: 337 LVATDVAARGIDVDDVTHVVNYDCPQDEKAYVHRIGRTGRAGKTGVAVTFV 387 >UniRef50_C0YHR5 ATP-dependent RNA helicase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YHR5_9FLAO Length = 562 Score = 288 bits (737), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 154/385 (40%), Positives = 233/385 (60%), Gaps = 10/385 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEG-RDLMASAQTGTGKTAGFTLPLLQ 61 F LSPDIL+A+ E GY PT IQ+Q IP +L RDL+A AQTGTGKTA F+LP+L Sbjct: 4 FTETNLSPDILKAIGELGYESPTEIQKQTIPFILSDIRDLIALAQTGTGKTAAFSLPILD 63 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 + R ++ L+L PTREL QI +++++YSKY+ +I++ V+GG SI QM Sbjct: 64 MI------DDTSRKIQLLVLCPTRELCLQISKDIKNYSKYMKDIKTTAVYGGSSIVEQMR 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ ++V TPGR++DL ++ A+ + LVLDEAD ML MGF ++ +L++ P Sbjct: 118 SLKDKPQIIVGTPGRVIDLINRKALDFSAIHWLVLDEADEMLSMGFKDELETILSETPET 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 +Q LFSAT + +++ +++ L P I V N +T + V ++K+E L +I Sbjct: 178 KQTFLFSATMNKEVERISKNYLTKPHRISVGSINEVKKNITHEYYVVGYRQKKEALKRLI 237 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 Q ++F RT+ +A+ L ++G + A+HG+ SQ R + F+ +I +LV Sbjct: 238 DANPNQYSIIFCRTRMETQEVADFLMQNGYAADALHGDLSQAQRDTVMKKFRLKNIDILV 297 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD+ L HV+++ LP+ PE +VHR GRTGRA G +++L+ +E + L+ I Sbjct: 298 ATDVAARGLDVNSLTHVIHFSLPDDPEVFVHRSGRTGRAGKDGISMALIKPEESRKLKQI 357 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAE 385 + K EI IP D IKA+ Sbjct: 358 KSATKIEIHERTIPT--GDDIIKAQ 380 >UniRef50_C5LBR0 RNA helicase, putative n=4 Tax=Perkinsus marinus ATCC 50983 RepID=C5LBR0_9ALVE Length = 674 Score = 288 bits (736), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 161/417 (38%), Positives = 239/417 (57%), Gaps = 20/417 (4%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD L IL+ + G+ +PTPIQ Q P L GRD++ A+TG+GKT F +P + Sbjct: 213 TFDEACLPDYILKEINRAGFEKPTPIQVQGWPVALSGRDMVGIAETGSGKTLAFMIPAVI 272 Query: 62 HLITRQPH-AKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H I QP+ KG P+ LIL PTRELA QI + + I + V+GG PQ Sbjct: 273 H-INAQPYLQKGDGPI-VLILAPTRELALQIKAECDRFGRSSRITNTCVYGGTQRGPQAR 330 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GV++ +ATPGRL+D L +V LV+DEADRMLDMGF +R++++++ Sbjct: 331 ALQNGVEICIATPGRLIDFLESGTTNLKRVTYLVMDEADRMLDMGFEPQVRKIVSQIRPD 390 Query: 181 RQNLLFSATFSDDIKALAEKLLHN-PLEIEVARRNTASDQVTQHVHFVDKKRKRELL--- 236 RQ L++SAT+ +++ LA + + P+ + V R A + Q+V V+ K E L Sbjct: 391 RQTLMWSATWPKEVQHLARDICNEEPVLVTVGRSGHACHNIQQYVEVVENNVKPERLLAL 450 Query: 237 ----SHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFK 292 S G G + L+F TK GA+ + L +DG + +IHG+K Q R L FK Sbjct: 451 MQAASAATGGGWTAKTLIFCDTKRGADDITRLLRRDGWPALSIHGDKKQSERDWVLNQFK 510 Query: 293 SGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVD 352 +G +++ATD+A+RGLD++++ +V+NY+ P EDYVHRIGRTGRA A+G A S D Sbjct: 511 TGRSAIMIATDVASRGLDVKDVKYVINYDFPGTIEDYVHRIGRTGRAGASGVAYSFFSPD 570 Query: 353 EHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQG--GGRGQ 407 + KL R + L++ ++P +++ N R GG GRG+G GG+G+ Sbjct: 571 KGKLARQLVNCLREA--NQSVP-----EALETIAFANDRSNSGGKGRGKGNYGGKGR 620 >UniRef50_Q9P7C7 Pre-mRNA-processing ATP-dependent RNA helicase prp11 n=1 Tax=Schizosaccharomyces pombe RepID=PRP11_SCHPO Length = 1014 Score = 288 bits (736), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 155/371 (41%), Positives = 222/371 (59%), Gaps = 8/371 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 S+ GLS + + GY +PT IQ QAIPA+ GRD++ A+TG+GKT F LP+ + Sbjct: 419 SWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFR 478 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ ++P G P+ A+I+TPTRELA QI + + K LNIR+ +GG I Q+ Sbjct: 479 HIKDQRPLKTGEGPI-AIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIAD 537 Query: 122 LRGGVDVLVATPGRLLDLEHQNA---VKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ G +++V TPGR++D+ NA L + LVLDEADRM D+GF + R++ + Sbjct: 538 LKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIR 597 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ +LFSATF ++ALA K+L P+EI V R+ + +V Q V ++ K L Sbjct: 598 PDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASEVEQIVEVRPEESKFSRLLE 657 Query: 239 MIGKGNWQQV----LVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSG 294 ++G+ Q+ LVF + A+ L L K G S +IHG K Q R ++D+K+G Sbjct: 658 LLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAG 717 Query: 295 DIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEH 354 VL+AT + ARGLD++ L VVNY+ PN EDYVHR+GRTGRA TG A++ + ++ Sbjct: 718 VFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQE 777 Query: 355 KLLRDIEKLLK 365 K DI K LK Sbjct: 778 KYAVDIAKALK 788 >UniRef50_UPI00016C471F RNA helicase DeaD n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C471F Length = 572 Score = 287 bits (735), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 160/363 (44%), Positives = 218/363 (60%), Gaps = 7/363 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LGL ++ + GY EPTPIQ++AIP ++EG DL+ A TGTGKTA F+LP+L Sbjct: 23 FAKLGLDSRLVERLTGLGYEEPTPIQREAIPPLIEGHDLIGRAATGTGKTAAFSLPILHG 82 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 L + R +LIL PTRELA Q+ E+V Y + L +R L ++GG ++ Q+ L Sbjct: 83 L----ARSTARTKPTSLILVPTRELAMQVAESVAKYGQPLGVRVLPIYGGAPMDQQIRAL 138 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 G+DV+VATPGR LD + +KLD + ++VLDEAD MLDMGF DI +L P +RQ Sbjct: 139 DRGIDVVVATPGRALDHMRRTTLKLDAITVVVLDEADEMLDMGFAEDIEAILAATPTERQ 198 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQ---VTQHVHFVDKKRKRELLSHM 239 LFSAT + IKA+A K L N EI V R + + V Q + V ++ K L + Sbjct: 199 TALFSATMAPRIKAIAVKHLKNATEIHVTRDPVPAGELPKVRQTAYVVQRQYKLAALGRV 258 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + L+F +T+ + L E L G R A+HG +Q AR R + F++G +L Sbjct: 259 LDGESPAAALIFCKTRSEVDELTEALGGRGYRPEALHGGMAQDARDRVMRLFRAGQANLL 318 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD+E L HVVN+ LP E+YVHRIGR GRA G A+++ E LR Sbjct: 319 VATDVAARGLDVEHLTHVVNFSLPLGIENYVHRIGRVGRAGREGVAITVAEPREQGALRA 378 Query: 360 IEK 362 IE+ Sbjct: 379 IER 381 >UniRef50_Q5JKF2 DEAD-box ATP-dependent RNA helicase 40 n=11 Tax=Viridiplantae RepID=RH40_ORYSJ Length = 792 Score = 287 bits (735), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 155/375 (41%), Positives = 233/375 (62%), Gaps = 9/375 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF++ G P+IL+ + G+ PTPIQ Q+ P L+ +D++A A+TG+GKT G+ LP Sbjct: 151 SFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFM 210 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ Q + + V L+L PTRELA QI E + + I S ++GG PQ+ Sbjct: 211 HIKRLQNNPRSGPTV--LVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRD 268 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GVDV+VATPGRL D+ + L QV LVLDEADRMLDMGF IR+++ ++P +R Sbjct: 269 LDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRR 328 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRN--TASDQVTQHVHFVDKKRKRELLSHM 239 Q L+++AT+ +++ +AE LL +P+++ + + A+ +TQ+V + K L + Sbjct: 329 QTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQI 388 Query: 240 I-GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 + + + +VL+F TK + LA L + ++AIHG+KSQ R + L+ F+SG + Sbjct: 389 LRSQDSGSKVLIFCTTKRMCDQLARTLTRQ-FGASAIHGDKSQSEREKVLSHFRSGRSPI 447 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLDI+++ V+NY+ P EDYVHRIGRTGRA ATG A + C + K Sbjct: 448 LVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAA 507 Query: 359 DIEKLLK---KEIPR 370 D+ K+L+ + +PR Sbjct: 508 DLIKILEGANQRVPR 522 >UniRef50_B0U160 DEAD-box subfamily ATP-dependent helicase n=18 Tax=Francisella RepID=B0U160_FRAP2 Length = 581 Score = 287 bits (735), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 153/374 (40%), Positives = 225/374 (60%), Gaps = 5/374 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LGL+ DI+ V + GY PTPIQQ AIP +L GRD++ AQTGTGKTA F LPL+ + Sbjct: 9 FSQLGLNQDIIDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMK 121 + ++ R P + L+L PTRELA Q+ E + ++K + N+ ++GG Q+ Sbjct: 69 M---DLESRDRAP-QVLVLAPTRELAIQVAEQFQAFAKNIPNLDVACIYGGQEYGSQIRA 124 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV V+V T GR++D + ++LD + LVLDEAD ML MGFI D+R VL+ + + Sbjct: 125 LKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVRYVLSHVSDEC 184 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT DI + ++ L NP +I+V + ++ VTQ + RK + L ++ Sbjct: 185 QRLLFSATIPTDIADIIQEYLRNPCKIQVKAKTKTANTVTQKFIVIKGFRKIDALDRLLE 244 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 V++F +TK +A+ L G R AAI+G+ Q R + F+S VLVA Sbjct: 245 VEETDGVIIFVKTKTSTIEVADNLKALGYRVAAINGDMQQSQREYIVDQFRSAKSDVLVA 304 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+ ARG+D+E + HV+NY++PN + YVHRIGRTGRA G ++SLV + E + LR +E Sbjct: 305 TDVVARGIDLERISHVINYDMPNDSDTYVHRIGRTGRAGREGISISLVPLKEMRFLRTLE 364 Query: 362 KLLKKEIPRIAIPG 375 + + + +P Sbjct: 365 RFTGSPMQEVFMPS 378 >UniRef50_C5CGQ2 DEAD/DEAH box helicase domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGQ2_KOSOT Length = 524 Score = 287 bits (734), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 159/384 (41%), Positives = 226/384 (58%), Gaps = 8/384 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F +GLS +L ++ + G+ EPTPIQ +AIP +L GRD++ A TGTGKTA F +PLL Sbjct: 3 MNFSEMGLSRKMLNSIEKVGFVEPTPIQSKAIPVILNGRDIIGQAHTGTGKTAAFGIPLL 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDY-SKYLNIRSLVVFGGVSINPQM 119 + L + V+ALIL PTRELA Q+ + S I L ++GG SI Q+ Sbjct: 63 EML------DYSSKKVQALILCPTRELAVQVAREIAALASNRKEIEVLAIYGGQSIERQI 116 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ G+ V+V TPGR++D + +KLD + +VLDEAD ML+MGF+ DIR +L+ + Sbjct: 117 NTLKKGIQVVVGTPGRIMDHMRRKTLKLDDTKFVVLDEADEMLNMGFLEDIRYILSHVGK 176 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ +FSAT I ALA++ P I+V R V Q+ + + RK + LS + Sbjct: 177 ERQITMFSATMPKAIIALAQEFQKEPELIKVINRELTVSTVEQYYLEIGESRKFDALSKL 236 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I N Q LVF TK + L L G +HG+ SQ R R + F++ I+VL Sbjct: 237 IEYYNPQLSLVFCNTKKKVDELVPMLQAKGYLVDGLHGDMSQSLRNRVMNSFRNKSIKVL 296 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D++++ V NY++P E YVHRIGRTGRA TG+A S LR+ Sbjct: 297 VATDVAARGIDVDDIEAVFNYDIPQDEEYYVHRIGRTGRAGKTGKAFSFAYGRSLHRLRE 356 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIK 383 I++ K +I + +P E D + K Sbjct: 357 IQRYTKIKIKSLNVPS-EKDVNTK 379 >UniRef50_B9ZPI5 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=B9ZPI5_9GAMM Length = 627 Score = 287 bits (734), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 155/375 (41%), Positives = 223/375 (59%), Gaps = 8/375 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF LGLS + RA+ + G+ PTP+Q IPA+L G D++ AQTGTGKT F LPL+ Sbjct: 6 SFAELGLSESLARALLQLGFTTPTPVQAACIPALLAGDDVLGEAQTGTGKTGAFGLPLID 65 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMM 120 + Q R V+ALIL PTRELA Q+ + ++ ++ + L V+GG + Q+ Sbjct: 66 SIDPAQ------RRVQALILAPTRELAGQVATALEGFAASIDGLEILPVYGGQPMGVQIR 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR G V+V TPGR++D + + LD + ++VLDEAD ML MGF+ +I +L + PA+ Sbjct: 120 ALRDGAQVVVGTPGRVVDHIKRGTLTLDALRMVVLDEADEMLRMGFVEEIEWILEQTPAE 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LFSAT I+ +A + + P EI + N A + Q VD++ K E L MI Sbjct: 180 RQTTLFSATMPAPIRRIAHRHMREPQEIRIGAGNEAGTDIDQSYCLVDQRHKTEALGRMI 239 Query: 241 G-KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + +VF RTK +AE LN G++S+ ++G+ QG R R +AD + G + V+ Sbjct: 240 EVEAGLDAAIVFARTKAATAEIAEALNAQGVQSSPLNGDMEQGERERVVADLRDGRLDVI 299 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+ + HV NY+ P E YVHRIGRTGRA G A+ + + ++LRD Sbjct: 300 VATDVAARGIDVPRITHVFNYDAPGDAEVYVHRIGRTGRAGRKGRAILFLEPRKRRMLRD 359 Query: 360 IEKLLKKEIPRIAIP 374 IE+L K + +P Sbjct: 360 IERLTGKPVREQKVP 374 >UniRef50_B7VSB7 ATP-dependent RNA helicase n=74 Tax=Gammaproteobacteria RepID=B7VSB7_VIBSL Length = 689 Score = 287 bits (734), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 152/375 (40%), Positives = 227/375 (60%), Gaps = 7/375 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F+ L L+ +IL A+ G+ PTPIQ AIP +LEGRD + AQTGTGKTA F+LPLL Sbjct: 34 IQFNELALNENILSALDSMGFVSPTPIQAAAIPLLLEGRDALGKAQTGTGKTAAFSLPLL 93 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 + Q +P +A+I+ PTRELA Q+ +++ + + ++ L ++GG SI QM Sbjct: 94 NKINLNQ-----HKP-QAIIMAPTRELAIQVAAEIKNLGRDIKGLKVLEIYGGASIVDQM 147 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L G ++V TPGR+ DL ++ + LD+ VLDEAD ML MGF+ D+ +L + P Sbjct: 148 RALSRGAHIVVGTPGRVKDLLTRDRLHLDEAHTFVLDEADEMLKMGFVDDVTWILEQAPE 207 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 Q +LFSAT +K + ++ L NP +++VA N D+V Q+ V K E +S + Sbjct: 208 SAQRVLFSATMPPMVKTIVDRYLRNPAKVDVAGTNHTVDKVAQNYWVVKGVEKDEAMSRL 267 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + +VF RT+ LA+ L+ G ++AA+HG+ Q R R + K G I +L Sbjct: 268 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 327 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+ ARGLD+ + HV NY++P E Y+HRIGRTGRA G+A+ LV ++ ++LR Sbjct: 328 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 387 Query: 360 IEKLLKKEIPRIAIP 374 IE++ K ++ I +P Sbjct: 388 IERVTKSQMEEIQLP 402 >UniRef50_Q7UG20 ATP-dependent RNA helicase n=2 Tax=Bacteria RepID=Q7UG20_RHOBA Length = 931 Score = 287 bits (734), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 155/373 (41%), Positives = 227/373 (60%), Gaps = 7/373 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L L ++ +AVA GY +PTPIQ + IP +L+GRD++A +QTGTGKTA F LP+L Sbjct: 306 FRDLDLRAEVQKAVAASGYDKPTPIQAEIIPYMLDGRDVLAQSQTGTGKTAAFALPILSR 365 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMMK 121 + R RRP + L+L PTRELA Q+ + Y L+ + ++GG PQ+ + Sbjct: 366 VDVR-----SRRP-QVLVLAPTRELAIQVARSFTKYGADLSGFQVAAIYGGQDYEPQLKQ 419 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GV V+V TPGR++D + + L ++ LVLDEAD ML+MGF+ D++ VL K P R Sbjct: 420 LRRGVQVVVGTPGRVIDHVKRGTLDLGSLDCLVLDEADEMLNMGFLEDVQFVLEKSPEGR 479 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT I+ +A++ L++P I + + + V Q FV + K + L+ ++ Sbjct: 480 QVALFSATLPKPIRKIADEYLNDPARITIKSKTITAASVRQRALFVSPRDKIDALTRILE 539 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 V+VFT+TK +AE+L++ G + A++G+ Q R R + K G + VLVA Sbjct: 540 VEETDGVIVFTKTKDSTLSVAEKLSQQGFSAIALNGDMPQKVRERTIDQLKRGQLDVLVA 599 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+ + HV N++LP+ E YVHRIGRTGRA +G+A+ + + + LR IE Sbjct: 600 TDVAARGLDVPRISHVFNFDLPHDSESYVHRIGRTGRAGRSGQAIIFLTNAQRRQLRFIE 659 Query: 362 KLLKKEIPRIAIP 374 K+ I I IP Sbjct: 660 NTTKQPIEIIDIP 672 >UniRef50_Q31AC4 DEAD/DEAH box helicase-like protein n=9 Tax=Prochlorococcus marinus RepID=Q31AC4_PROM9 Length = 593 Score = 286 bits (733), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 152/375 (40%), Positives = 228/375 (60%), Gaps = 9/375 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F G + IL +++ +GY+ PTPIQ+ AIP ++ GRDL+ AQTGTGKTA F LPL++ Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112 Query: 63 LI-TRQPHAKGRRPVRALILTPTRELAAQIGENVRDYS-KYLNIRSLVVFGGVSINPQMM 120 L ++ +AK L++TPTRELA Q+ E+ + YS + N +++ ++GG Q+ Sbjct: 113 LADNKELNAK------VLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIY 166 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ VDV+V TPGR++D Q K++ + LVLDEAD ML+MGF+ DI ++ +LP Sbjct: 167 ALKRKVDVVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLEDIEWIIDQLPKN 226 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 +Q +LFSAT ++I+ +A+K L++P EI + + ++Q +V + K + L ++ Sbjct: 227 KQMVLFSATMPNEIRNIAKKYLNDPAEILIKSVKKETQLISQKFLYVQRHHKLDALKRIL 286 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 N + V++F RTK +AE L G A ++G+ Q R + K G I +LV Sbjct: 287 ELNN-EGVIIFVRTKLLTTSIAEALENLGHSVAVLNGDIPQNQRENTVDRLKKGFIDILV 345 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD+E + VVNY+ P E Y HRIGRTGRA +GEA+ V E LR++ Sbjct: 346 ATDVAARGLDVERIKLVVNYDFPFDKETYTHRIGRTGRAGRSGEAILFVNHREKHFLRNL 405 Query: 361 EKLLKKEIPRIAIPG 375 E + +I I IP Sbjct: 406 ENSTRTKIEEINIPS 420 >UniRef50_C7HXF4 DEAD/DEAH box helicase domain protein n=3 Tax=Bacteria RepID=C7HXF4_THIIN Length = 666 Score = 286 bits (733), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 164/398 (41%), Positives = 232/398 (58%), Gaps = 11/398 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LGL +L+A+ + GY P+PIQ IP +L GRD++ AQTGTGKTA F LP+L Sbjct: 9 FAELGLPEPLLQALRDVGYETPSPIQAATIPPLLAGRDVLGQAQTGTGKTAAFALPILAK 68 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMK 121 + H + AL+L PTRELA Q+ E Y+ +L L ++GG S PQ+ Sbjct: 69 IDCNARHTQ------ALVLAPTRELAIQVAEAFARYATHLPGFNVLPIYGGQSYVPQLAS 122 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G V+V TPGR++D + +KLDQ+ +VLDEAD ML MGFI D+ +L K P +R Sbjct: 123 LKRGAHVVVGTPGRIIDHLERGTLKLDQLAHMVLDEADEMLRMGFIDDVESILKKTPPQR 182 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT I+ +A+ L +P EI + T + + Q V K + L+ ++ Sbjct: 183 QVALFSATMPSAIRRIAQTYLRDPQEITIKAATTTATHIQQRYWMVSGLHKLDALTRILE 242 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 ++ +++F RTK LAE+L G +AA++G+ Q R R + K G + +LVA Sbjct: 243 VEPFEGMIIFARTKQATEELAEKLAARGFTAAALNGDVPQALRERMVQRLKDGQLDILVA 302 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + HVVNY++P E YVHRIGRTGRA +G+A+ V E LLR IE Sbjct: 303 TDVAARGLDVERISHVVNYDIPTDTESYVHRIGRTGRAGRSGDAILFVTPRERHLLRAIE 362 Query: 362 KLLKKEIPRIAIPGYEP--DPSIK--AEPIQNGRQQRG 395 + ++ I ++ +P E D I E I R+Q G Sbjct: 363 RATRQPITQMQLPSTEAVNDSRISRFMERITEAREQEG 400 >UniRef50_A4X1W4 DEAD/DEAH box helicase domain protein n=4 Tax=Actinomycetales RepID=A4X1W4_SALTO Length = 621 Score = 286 bits (732), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 160/386 (41%), Positives = 225/386 (58%), Gaps = 5/386 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LG + + A+ G IQ+ A+P L G DL+ A TGTGKT GF +PLL+ Sbjct: 98 TFAELGARKETVDALNAAGITRAFAIQEYALPIALRGVDLIGQAPTGTGKTLGFGVPLLE 157 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + P G +AL++ PTREL Q+ +++ +R L ++GGV+ PQ+ Sbjct: 158 RVFA--PAEGGDGTPQALVVVPTRELGIQVAKDLHAAGSTRGVRVLPIYGGVAYEPQIEA 215 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GV++LV TPGRLLDL Q +KLD+V LVLDEADRMLD+GF+ D+ ++L LP +R Sbjct: 216 LRTGVEILVGTPGRLLDLAKQKQLKLDRVRALVLDEADRMLDLGFLDDVEKILAMLPEER 275 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVAR--RNTASDQVTQHVHFVDKKRKRELLSHM 239 Q +LFSAT D I AL+ + L P+ I S Q Q + K E+++ + Sbjct: 276 QTMLFSATMPDPIVALSRRFLRRPVTIHAGHTAETGPSPQTQQLAYRTHSLNKIEIVARI 335 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++FTRTK A+ +A L+ G AA+HG+ QGAR RAL F++G I L Sbjct: 336 LQAKGRGLTMIFTRTKRAADRVAADLDFRGFAVAAVHGDLGQGARERALRAFRTGKIDTL 395 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+ + HV+NY+ P + Y HRIGRTGRA A+G A++ V D+ R Sbjct: 396 VATDVAARGIDVSGVTHVLNYDCPEDQDTYTHRIGRTGRAGASGVAVTFVDWDDMPRWRI 455 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAE 385 I+K L E+P Y P + AE Sbjct: 456 IDKTLGLEMPE-PPETYHTSPHLYAE 480 >UniRef50_Q2PZC2 Vasa protein n=16 Tax=Neoptera RepID=Q2PZC2_APIME Length = 630 Score = 286 bits (732), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 157/377 (41%), Positives = 235/377 (62%), Gaps = 12/377 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF++ GL +L + + GY++PTP+Q+ A+P ++ GRDLMA AQTG+GKTA F +P++ Sbjct: 197 SFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACAQTGSGKTAAFAVPIIN 256 Query: 62 HLITRQPH---AKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 L+ R + +I++PTREL QI + + +S ++++V +GG S+ Q Sbjct: 257 TLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNSILKTVVAYGGTSVMHQ 316 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVL---T 175 KL G +LVATPGRLLD + VK V+ LVLDEADRMLDMGF+ I +++ T Sbjct: 317 RGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQFLVLDEADRMLDMGFLPSIEKMVDHET 376 Query: 176 KLP-AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRE 234 +P +RQ L+FSATF D+++ LA + L+N L + V A V Q+ + V + +K++ Sbjct: 377 MVPLGERQTLMFSATFPDEVQHLARRFLNNYLFLAVGIVGGACSDVEQNFYEVARNKKKD 436 Query: 235 LLSHMIGK----GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALAD 290 LL ++ + G LVF K A+ +A L+++ + +IHG++ Q R ALAD Sbjct: 437 LLKEILERENDSGTLGGTLVFVEMKKKADFIAVFLSENNYPTTSIHGDRLQRQREEALAD 496 Query: 291 FKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC 350 FKSG + +LVAT +AARGLDI+ + HV+NY+LP ++YVHRIGRTGR G A S Sbjct: 497 FKSGRMSILVATAVAARGLDIKNVSHVINYDLPKGIDEYVHRIGRTGRVGNRGRATSFFD 556 Query: 351 VDEHKLLR-DIEKLLKK 366 +E LR D+ ++LK+ Sbjct: 557 PEEDAPLRGDLVRILKQ 573 >UniRef50_D2NRF7 Superfamily II DNA and RNA helicase n=3 Tax=Bacteria RepID=D2NRF7_9MICC Length = 732 Score = 286 bits (732), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 155/393 (39%), Positives = 230/393 (58%), Gaps = 9/393 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LGL +L A+ E GY +P+PIQ+Q IP +LEG D++ AQTGTGKTA F LP L Sbjct: 63 FTDLGLDARVLAALEEVGYEKPSPIQEQTIPLLLEGHDVVGLAQTGTGKTAAFALPALSR 122 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMK 121 + R + L+L PTRELA Q+ E Y+ ++ + L ++GG PQ+ Sbjct: 123 MAELADINGVSRDTQVLVLAPTRELALQVAEAFSSYATHMEDFTVLPIYGGSPYGPQLAG 182 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR G V+V TPGR++D + ++ L ++ LVLDEAD ML MGF D+ ++L P + Sbjct: 183 LRRGAQVVVGTPGRVIDHLEKGSLDLSNLQYLVLDEADEMLRMGFAEDVEKILEGTPDSK 242 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT + I+ +A++ L++P E+ V + T S ++Q V K + ++ ++ Sbjct: 243 QVALFSATMPNSIRKIAQQYLNDPREVRVKAKTTTSSNISQRYMQVMHSHKLDAMTRVLE 302 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 N+ ++VF RTK +A++L G +AAI+G+ Q R R + + G I +LVA Sbjct: 303 VENYDGIIVFVRTKKETEEVADKLKARGFAAAAINGDIPQQLRERTVDALRDGRIDILVA 362 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + VVNY++P+ E YVHRIGRTGRA G A+ V E +LR IE Sbjct: 363 TDVAARGLDVERISLVVNYDIPHDTESYVHRIGRTGRAGREGAAILFVTPREKYMLRQIE 422 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQR 394 K ++++ + +P AE + R+QR Sbjct: 423 KATRQKVEPMHMP--------TAEAVNETRKQR 447 >UniRef50_Q6APU7 Related to ATP-dependent RNA helicase (RhlE) n=1 Tax=Desulfotalea psychrophila RepID=Q6APU7_DESPS Length = 498 Score = 286 bits (732), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 145/365 (39%), Positives = 221/365 (60%), Gaps = 3/365 (0%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F + ++ +A+ + TPIQ+Q++ AVL G+DL+ A TGTGKTA F + ++ Sbjct: 96 FHDFAIPLPLMHGIADLKFEYCTPIQEQSLEAVLAGKDLIGKANTGTGKTAVFLVGVMAR 155 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 L+ + G+R RALIL PTREL QI ++ + +Y + + V+GG QM L Sbjct: 156 LLADKKGGLGKRTPRALILAPTRELVMQIVKDAKKLGRYTGVNADAVYGGAEYEKQMELL 215 Query: 123 -RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 RG D++VATPGRL+D ++ V D + LV+DEADRMLDMGFI D+RR+++ +P KR Sbjct: 216 KRGKTDIVVATPGRLIDFHNKRLVNFDNCQTLVIDEADRMLDMGFIPDVRRIVSWMPKKR 275 Query: 182 --QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 Q L+FSAT S D+ L+ + +P +E +D V Q V+ V + K +L ++ Sbjct: 276 DRQTLMFSATISSDVNNLSAQWCVDPEVVEAEADQVTTDTVEQKVYLVTAEEKYNVLYNL 335 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I + + +++++F K LA++L ++ I + G+ Q R L F++G ++VL Sbjct: 336 IKENSDERIMIFANMKSETRKLADRLKRNSIDCLLLSGDVPQNKRQSRLESFRTGKVKVL 395 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+A RG+ I+ + +VVNY LP PEDYVHRIGRTGRA G+++S C + L D Sbjct: 396 VATDVAGRGIHIDGISYVVNYTLPYEPEDYVHRIGRTGRAGLAGKSVSFACEEGSFYLPD 455 Query: 360 IEKLL 364 IE+ + Sbjct: 456 IEEYI 460 >UniRef50_Q4TVV3 Probable ATP-dependent RNA helicase DDX46 n=18 Tax=Eumetazoa RepID=DDX46_DANRE Length = 1018 Score = 286 bits (732), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 149/371 (40%), Positives = 230/371 (61%), Gaps = 11/371 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 ++ G+S +L A+ + Y +PTPIQ QAIPA++ GRDL+ A+TG+GKT F LP+ + Sbjct: 341 TWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFR 400 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ ++P + P+ A+I+TPTRELA QI + + +SK L +R + V+GG I+ Q+ + Sbjct: 401 HILDQRPVGEAEGPL-AVIMTPTRELALQITKECKKFSKSLALRVVCVYGGTGISEQIAE 459 Query: 122 LRGGVDVLVATPGRLLDLEHQN---AVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ G +++V TPGR++D+ N L +V +V+DEADRM DMGF + R++ + Sbjct: 460 LKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEADRMFDMGFEPQVMRIVDNVR 519 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKR----E 234 RQ ++FSATF ++ALA ++L P+E++V R+ V QHV +++++K E Sbjct: 520 PDRQTVMFSATFPRTMEALARRILSKPVEVQVGGRSVVCSDVEQHVIVIEEEKKFLKLLE 579 Query: 235 LLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSG 294 +L H KG+ V++F + A+ L + L K ++HG Q R + DFK+G Sbjct: 580 ILGHYQEKGS---VIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNG 636 Query: 295 DIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEH 354 R+LVAT +AARGLD+++L VVNY PN EDYVHR GRTGRA G A + + + Sbjct: 637 ACRLLVATSVAARGLDVKQLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEGQA 696 Query: 355 KLLRDIEKLLK 365 + DI K L+ Sbjct: 697 RYSGDILKALE 707 >UniRef50_C8PPF9 ATP-dependent RNA helicase DbpA n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PPF9_9SPIO Length = 605 Score = 286 bits (731), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 173/452 (38%), Positives = 252/452 (55%), Gaps = 16/452 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F + L +L+ + E GY E TP+Q+Q A ++G DL +QTGTGKTA + + L+ Sbjct: 12 MNFSNFNLDSHLLQGLEEAGYIECTPVQEQVFSAGMDGSDLYVQSQTGTGKTAAYLVTLM 71 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q ++ + + RRP ALIL PTRELA Q+ E KY +R+ +GGV Q Sbjct: 72 QRMLAQGTES--RRP--ALILVPTRELAVQVEEEAHKLGKYTGLRAASFYGGVGYQQQEE 127 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA- 179 L+ GVD+++ TPGR++DLE +KL V LV+DEADRM DMGF D+R +L+ L Sbjct: 128 ALKNGVDLIIGTPGRVIDLEKSKTMKLKHVGFLVIDEADRMFDMGFYPDLRSLLSVLSKA 187 Query: 180 -KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 +RQ +LFSAT + +K LA + + EI + N D++ Q + V +K LL Sbjct: 188 EERQTMLFSATLNTWVKNLAWEYTIDAKEITIDADNVTVDEINQKLFHVAADQKMSLLLG 247 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + ++F TK +A++L +G + + G+ Q R + FK+G + Sbjct: 248 ILRNEKPENTIIFCNTKKTTEIVAKRLRINGYATEFLIGDLPQPKRLHIIDSFKAGKLTC 307 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARG+DI +L V+NY+LPN E+YVHRIGRT RA TG A SL + L Sbjct: 308 LVATDVAARGIDINDLAMVINYDLPNEAENYVHRIGRTARAGKTGAAYSLCSEQDVYNLP 367 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAK 418 DIEK ++ +IP + IPG E D Q R R + GGR ++PR GE Sbjct: 368 DIEKYIEAKIP-VVIPG-EEDFEKDRSADQYIRLDRDSADE-ERGGRFGRKPRPGE---- 420 Query: 419 SASAKPAEKPSRR-LGDAKPAGEQQRRRRPRK 449 ++ +K +RR A+PA +R +K Sbjct: 421 --KSRREDKDARRGTKTARPASRTADSKRKKK 450 >UniRef50_Q9SQV1 DEAD-box ATP-dependent RNA helicase 40 n=14 Tax=Eukaryota RepID=RH40_ARATH Length = 1088 Score = 286 bits (731), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 149/368 (40%), Positives = 224/368 (60%), Gaps = 6/368 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+S GL P+ILR + G+ PTPIQ Q P L+ RD++A A+TG+GKT G+ +P Sbjct: 435 ITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAF 494 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 ++ R R LIL PTRELA QI + + + I ++GG PQ+ Sbjct: 495 --ILLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLK 552 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L G D++VATPGRL D+ + QV +LVLDEADRMLDMGF IR+++ ++P + Sbjct: 553 ELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPR 612 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN--TASDQVTQHVHFVDKKRKRELLSH 238 RQ L+++AT+ +++ +A LL NP+++ + R + A+ +TQ+V V + K L Sbjct: 613 RQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQ 672 Query: 239 MI-GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++ + +V++F TK +HLA + + + IHG+K+QG R L F+SG Sbjct: 673 ILRSQERGSKVIIFCSTKRLCDHLARSVGRH-FGAVVIHGDKTQGERDWVLNQFRSGKSC 731 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 VL+ATD+AARGLDI+++ V+NY+ P EDYVHRIGRTGRA ATG A + + K Sbjct: 732 VLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYA 791 Query: 358 RDIEKLLK 365 D+ K+L+ Sbjct: 792 PDLIKVLE 799 >UniRef50_Q3AX69 DEAD/DEAH box helicase-like n=18 Tax=cellular organisms RepID=Q3AX69_SYNS9 Length = 624 Score = 286 bits (731), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 151/374 (40%), Positives = 229/374 (61%), Gaps = 7/374 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 FD G S +L+ +A++GY +P+PIQ+ A P ++ GRDL+ AQTGTGKTA F LPLL+ Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSK-YLNIRSLVVFGGVSINPQMMK 121 L G++ + L+L PTRELA Q+ ++ + Y+ + +++ L V+GG Q+ Sbjct: 133 L------ESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRSQIST 186 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GVDV+V TPGR++D Q + + LVLDEAD ML MGFI D+ +L +LP +R Sbjct: 187 LRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEMLRMGFIDDVEWILEQLPKER 246 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q +LFSAT +I+ L+++ L++P E+ + ++ + Q V K E L ++ Sbjct: 247 QVVLFSATMPPEIRRLSKRYLNDPAEVTIKTKDQDGKLIRQRAITVPMSHKLEALQRVLD 306 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + V++F RTK +AE L G + A ++G+ Q R R + +SG + VLVA Sbjct: 307 ACGGEGVIIFARTKVITLTVAETLEAAGHQVAVLNGDVPQNQRERTVERLRSGSVDVLVA 366 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + V+NY++P E YVHRIGRTGRA TGEA+ + E + +R++E Sbjct: 367 TDVAARGLDVERIGLVINYDMPFDSEAYVHRIGRTGRAGRTGEAVLFMTPRERRFIRNLE 426 Query: 362 KLLKKEIPRIAIPG 375 + + I + +PG Sbjct: 427 RATGQPIEMMEVPG 440 >UniRef50_Q65XX1 Vasa-and belle-like helicase protein 1, isoform c n=3 Tax=Caenorhabditis elegans RepID=Q65XX1_CAEEL Length = 660 Score = 286 bits (731), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 162/385 (42%), Positives = 233/385 (60%), Gaps = 18/385 (4%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F+ G P ++ V GY +PTP+Q+ +IP +L RDLM+ AQTG+GKTA F LP++QH Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 200 Query: 63 LITRQP-------HAKGRRPVR--ALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGG- 112 ++ P GRR AL+L+PTRELA QI + +S NI++ +++GG Sbjct: 201 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 260 Query: 113 VSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRR 172 + Q+ +LR G +L+ATPGRL+D+ Q + L LVLDEADRMLDMGF IR+ Sbjct: 261 ENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRK 320 Query: 173 VLTK-LPAK--RQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVD 228 ++ + +P K R +FSATF +I+ LA+ L N + + V R + S+ + Q + +V+ Sbjct: 321 IVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVN 380 Query: 229 KKRKR-ELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRA 287 + KR L+ ++ + + VLVF TK GAN LA LN+ IRS +IHG+ Q R R Sbjct: 381 EMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERN 440 Query: 288 LADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALS 347 L F+SG +LVAT +AARGLDI + HV+NY+LP ++YVHRIGRTGR G A S Sbjct: 441 LELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATS 500 Query: 348 LVCVDEHKLLRDIEKLL---KKEIP 369 + RD++ L+ +E+P Sbjct: 501 FFNDKNRGIGRDLKNLIVESNQEVP 525 >UniRef50_O26305 ATP-dependent RNA helicase, eIF-4A family n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26305_METTH Length = 425 Score = 286 bits (731), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 160/386 (41%), Positives = 231/386 (59%), Gaps = 16/386 (4%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F +S DI RA+ + G+ TPIQ +P L+G D++ AQTGTGKTA F +P+L Sbjct: 4 LEFSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVL 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 ++L + R +ALI+ PTREL Q+ E ++ KY+ ++ L V+GG SI Q+ Sbjct: 64 ENL-------EAERVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIA 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +LR GV V+VATPGRL+D + V L + +VLDEAD ML+MGFI DI R+L+ +P + Sbjct: 117 QLRRGVHVIVATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFIDDIERILSHVPER 176 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT S I +A K + NP + V +++ S ++ + ++ K ELL ++ Sbjct: 177 RQTMLFSATVSKPILRIARKYMRNPQVMRVEKKH--SPKIDEFYFKTREEDKVELLDWIL 234 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 N + L+F TK L QLN+ G + IHG+ SQ R R + F+ GD +LV Sbjct: 235 SSNNIRMGLIFCNTKRRVQRLRRQLNRMGYSADEIHGDLSQSKRERVMERFRRGDFSLLV 294 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+ + ++ VVNY+LP E YVHRIGRTGRA ++G++ +LV E LR I Sbjct: 295 ATDVAARGIHVPDVEAVVNYDLPFENEYYVHRIGRTGRAGSSGKSFTLVVGSEVHRLRRI 354 Query: 361 EKLLKKEIPRIAIP-------GYEPD 379 + K I + +P GYE D Sbjct: 355 QSFTGKRIKQSNMPSPEEIRRGYEMD 380 >UniRef50_Q0D1K3 Pre-mRNA-processing ATP-dependent RNA helicase prp5 n=34 Tax=Dikarya RepID=PRP5_ASPTN Length = 1181 Score = 285 bits (730), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 160/410 (39%), Positives = 242/410 (59%), Gaps = 11/410 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 + GL L + GY PT IQ QAIPA++ GRD++ A+TG+GKT F +P+ +H Sbjct: 551 WSQCGLGVQTLDVIDRLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTVAFLIPMFRH 610 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + ++P P+ LI+TPTRELA QI ++ + + K LN+R++ +GG I Q+ +L Sbjct: 611 IKDQRPLENMEGPI-GLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAEL 669 Query: 123 RGGVDVLVATPGRLLDLEHQNA---VKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 + G +++V TPGR++DL NA L +V +VLDEADRM DMGF + +++ + Sbjct: 670 KRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANVRP 729 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQ--HVHFVDKKRKR--EL 235 RQ +LFSATF +++ALA K L+ P+EI V ++ + ++TQ V DKK R EL Sbjct: 730 DRQTVLFSATFPRNMEALARKTLNKPVEIVVGGKSVVAPEITQIVEVRNEDKKFVRLLEL 789 Query: 236 LSHMIGKGNWQ--QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKS 293 L ++ + + L+F + A+ L +L + G +IHG K Q R + DFK+ Sbjct: 790 LGNLYSSDENEDARALIFVERQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKA 849 Query: 294 GDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDE 353 G VL+AT +AARGLD+++L VVNY+ PN EDYVHR GRTGRA TG A++ + D+ Sbjct: 850 GIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQ 909 Query: 354 HKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGG 403 + DI K LK+ ++ P + S E ++ G+++ G G G Sbjct: 910 ERFSVDIAKALKQSGQKVPEPVQQMVDSF-LEKVKAGKEKASASGFGGKG 958 >UniRef50_Q0W8H7 ATP-dependent RNA helicase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W8H7_UNCMA Length = 497 Score = 285 bits (729), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 153/375 (40%), Positives = 224/375 (59%), Gaps = 6/375 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F L L+P I+RAV E G+ E TPIQ+QAIP +EG+DL+ A+TGTGKTA F +P++ Sbjct: 2 VKFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMV 61 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + +P +KG V+ L++ PTRELA Q+ E + K IRS+ ++GG Q+ Sbjct: 62 EAI---RPTSKG---VQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVK 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L ++V TPGRLL+ + V+ + I VLDEAD+MLDMGFI + ++L KLP + Sbjct: 116 ALEELPHIVVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLPER 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT S ++ LA K L +P IE Q+ + +K+K E L+ ++ Sbjct: 176 RQTLLFSATLSPPVQMLARKYLKDPELIEFEEEGITVPTTVQYYIEMPEKQKFEALTRLL 235 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + +VF T+ LA+ L + G + +HG+ Q R L FK+G++ +LV Sbjct: 236 DQEKPELAIVFVATRIRVGELAKALVERGYHALGLHGDLLQYQRENTLDKFKAGEVSILV 295 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI+ + HV N+++P P+ YVHRIGRTGRA G A + V + L I Sbjct: 296 ATDVAARGLDIQGVTHVYNFDIPRDPDSYVHRIGRTGRAGNAGTATTFVTPKDKTALEAI 355 Query: 361 EKLLKKEIPRIAIPG 375 E+ + +I PG Sbjct: 356 EQAIDHQITSKPAPG 370 >UniRef50_UPI0001C311D7 DEAD/DEAH box helicase domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C311D7 Length = 481 Score = 285 bits (728), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 151/362 (41%), Positives = 219/362 (60%), Gaps = 9/362 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS +L A+ + GY P+PIQ+QAIP +L G D++ AQTG+GKTA F LPL++ Sbjct: 3 TFADLGLSAPVLEALRDVGYENPSPIQEQAIPPLLAGNDMIGQAQTGSGKTAAFGLPLME 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 ++ R V+AL+LTPTREL Q+ + +R Y I + VFGG I Q + Sbjct: 63 YV------DPSDRDVQALVLTPTRELCIQVTQALRSYGARKGIDVVAVFGGAPIRSQQAQ 116 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR G ++V T GR+ DL ++++ L +VLDEAD MLD+GF+ D+ ++L P R Sbjct: 117 LRAGGQIVVGTVGRVKDLISRHSLMLHGTRFVVLDEADEMLDLGFLEDVEKILALTPGSR 176 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT +I+ L+E+ L+NP+ ++V D V Q + ++ K ++L ++ Sbjct: 177 QTALFSATMPPEIRKLSERYLYNPVHVKVRAATLTVDTVEQFSLEMSQRDKPDMLGTVLE 236 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 Q +VF RTK + L L G+ A+HG+ SQG R + FKSG + +LVA Sbjct: 237 SEKPDQAIVFVRTKIRCDQLYRTLRDRGMNVKALHGDMSQGQRDGVMLSFKSGRLPILVA 296 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLDI + HVVN+++P P+ YVHRIGRTGR +G A++ + K RDIE Sbjct: 297 TDVAARGLDISSVTHVVNFDVPTSPDVYVHRIGRTGRVGRSGRAITFY---DSKQKRDIE 353 Query: 362 KL 363 + Sbjct: 354 AI 355 >UniRef50_A3FQ59 Putative uncharacterized protein n=1 Tax=Cryptosporidium parvum Iowa II RepID=A3FQ59_CRYPV Length = 586 Score = 285 bits (728), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 151/376 (40%), Positives = 229/376 (60%), Gaps = 7/376 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF + G ++ A+ G+ EPT IQ Q P L G D++ A+TG+GKT GF LP + Sbjct: 169 SFVTSGFPNFLVDALYRTGFTEPTAIQVQGWPVALSGHDMIGIAETGSGKTLGFLLPAMI 228 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + G P+ L+L PTREL QI E + +R+ ++GGV PQ Sbjct: 229 HIRAQPLLRYGDGPI-CLVLAPTRELVEQIREQANQFGSIFKLRNTAIYGGVPKRPQQAS 287 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 +R GV++ +A PGRL+DL + L +V LVLDEADRMLDMGF IR++++++ R Sbjct: 288 IRNGVEICIACPGRLIDLLEEGYTNLSRVTYLVLDEADRMLDMGFEPQIRKLVSQIRPDR 347 Query: 182 QNLLFSATFSDDIKALAEKLLHN-PLEIEVARRNT--ASDQVTQHVHFVDKKRKRELLSH 238 Q LL+SAT+ +++ LA L P+ I V + AS + Q+V+ V++ K+ L Sbjct: 348 QTLLWSATWPKEVQKLARDLCKEIPIHINVGSVDALKASHNIKQYVNVVEESEKKAKLKM 407 Query: 239 MIGKGNWQ---QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295 +G+ + +VL+F TK GA+ L ++L DG + IHG+K Q RT L +F++G Sbjct: 408 FLGQVMVESAPKVLIFCETKRGADILTKELRLDGWPALCIHGDKKQEERTWVLNEFRTGA 467 Query: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK 355 +++ATD+AARGLDI+++ V+N++ PN EDY+HRIGRTGRA ATG +LS D+++ Sbjct: 468 SPIMIATDVAARGLDIKDINFVINFDFPNQIEDYIHRIGRTGRAGATGVSLSFFTPDKYR 527 Query: 356 LLRDIEKLLKKEIPRI 371 + D+ K+LK+ R+ Sbjct: 528 MASDLIKVLKEAKQRV 543 >UniRef50_C6X450 Cold-shock DEAD-box protein A n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X450_FLAB3 Length = 571 Score = 285 bits (728), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 152/385 (39%), Positives = 233/385 (60%), Gaps = 10/385 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAV-LEGRDLMASAQTGTGKTAGFTLPLLQ 61 F LSP+IL+A+ E G+ PT IQ+Q IP + + RDL+A AQTGTGKTA F+LP+L Sbjct: 4 FTETNLSPEILKAIGELGFESPTEIQKQTIPFISTDIRDLIALAQTGTGKTAAFSLPILD 63 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMM 120 + G R ++ L+L PTREL QI +++++YSKY+N I++ V+GG SI Q+ Sbjct: 64 MI------DDGSRKIQFLVLCPTRELCLQITKDIKNYSKYMNNIKTTAVYGGSSITDQIR 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR ++V TPGR++DL ++ A+ +++ LVLDEAD ML MGF D+ +L + P Sbjct: 118 SLRDKPQIIVGTPGRVIDLINRKALDFSEIQWLVLDEADEMLSMGFKDDLETILRETPET 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 + LFSAT + +++ +++ L P I V N + + V + K+E L +I Sbjct: 178 KHTYLFSATMNKEVERISKSYLTAPHRISVGSINEVKKNIKHEFYVVGYRHKKEALKRLI 237 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 Q ++F RT+ +A+ L ++G + A+HG+ SQ R + F+ +I +LV Sbjct: 238 DANPNQYSILFCRTRMETQEVADFLMQNGYAADALHGDLSQAQRDTVMKKFRLKNIDILV 297 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD++ L HV++Y LP+ PE +VHR GRTGRA G ++SL+ +E + L+ I Sbjct: 298 ATDVAARGLDVDSLTHVIHYSLPDDPEVFVHRSGRTGRAGKDGISMSLIKPEESRKLKQI 357 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAE 385 + K +I +P D IKA+ Sbjct: 358 KMSTKIDIVEKKVPT--GDAIIKAQ 380 >UniRef50_P42305 ATP-dependent RNA helicase dbpA n=99 Tax=Firmicutes RepID=DBPA_BACSU Length = 479 Score = 285 bits (728), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 154/375 (41%), Positives = 221/375 (58%), Gaps = 6/375 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F + +S DILRA+ GY EPT +QQ IPA LE +DL+ +QTG+GKTA F +PL + Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCE- 62 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + +P +ALILTPTRELA Q+ E++ + ++ I++ VFG S + Q +L Sbjct: 63 ----LANWDENKP-QALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAEL 117 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 + ++V TPGR+LD + + LD++ LV+DEAD ML+MGFI + ++ LP +R Sbjct: 118 KQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERT 177 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 +LFSAT DI+ L+ + + NP IEV + + V V ++ K LL ++ Sbjct: 178 TMLFSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAVIQVREENKFSLLKDVLMT 237 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 N ++F RTK N L ++L+ G IHG Q R + +FK G+ R LVAT Sbjct: 238 ENPDSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVAT 297 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARG+DIE + V+NY+LP E YVHR GRTGRA G+A+S V E + L DIE+ Sbjct: 298 DVAARGIDIENISLVINYDLPLEKESYVHRTGRTGRAGNKGKAISFVTAFEKRFLADIEE 357 Query: 363 LLKKEIPRIAIPGYE 377 + EI +I P E Sbjct: 358 YIGFEIQKIEAPSQE 372 >UniRef50_D0WN23 ATP-dependent RNA helicase DeaD n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WN23_9ACTO Length = 767 Score = 285 bits (728), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 159/373 (42%), Positives = 224/373 (60%), Gaps = 7/373 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 FD LGL D+L AV E G+ PT IQ AIP +L GRD++ AQTGTGKTA F LPLL H Sbjct: 129 FDDLGLPEDLLSAVKELGFSAPTAIQAAAIPILLRGRDVVGVAQTGTGKTAAFALPLLAH 188 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYS-KYLNIRSLVVFGGVSINPQMMK 121 + P +R V+AL+L PTRELA Q + + ++ K + V+GG S PQ+ Sbjct: 189 I---DPE---KREVQALVLAPTRELAMQGAQAIESFAAKSRGVDVAAVYGGSSYLPQLKA 242 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GG V+V TPGR++DL + A++LD V VLDEAD ML MGF D+ ++ +++P R Sbjct: 243 LEGGAQVVVGTPGRIMDLMDRGALRLDAVRYFVLDEADEMLRMGFAEDVEKIASEVPEGR 302 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 + LFSAT I+ +AE+ L + E+ ++R T V Q V ++ K L+ ++ Sbjct: 303 ISALFSATMPPPIRRVAERHLSDAEEVTISRPATTVSTVKQMYAVVPERHKIGALARVLA 362 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 Q LVF RT+ A L +L G+ +AA+ G+ Q R + +A + G + VLVA Sbjct: 363 VTEAQAALVFVRTRSTAEDLTIELGARGVATAALSGDVVQKEREKLVARLRDGTLDVLVA 422 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD++ + VVN+++P + YVHRIGRTGRA TGE+++ V E LR IE Sbjct: 423 TDVAARGLDVDRIGLVVNFDVPRETDTYVHRIGRTGRAGRTGESITFVTPKERPRLRRIE 482 Query: 362 KLLKKEIPRIAIP 374 K + +I +P Sbjct: 483 KQTGSRMEQIELP 495 >UniRef50_Q24I45 DEAD/DEAH box helicase family protein n=2 Tax=Tetrahymena thermophila RepID=Q24I45_TETTH Length = 713 Score = 285 bits (728), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 150/365 (41%), Positives = 225/365 (61%), Gaps = 8/365 (2%) Query: 12 ILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAK 71 I+ V + +P+PIQ A P VL G DL+ A+TG+GKT F LP + H+ + K Sbjct: 112 IMNEVTHAKFEKPSPIQSLAFPVVLSGHDLIGIAETGSGKTLSFLLPSIVHINAQPTVKK 171 Query: 72 GRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVA 131 G P+ L+L PTRELA QI + K ++ ++GG Q L+ GVDV++A Sbjct: 172 GDGPI-VLVLAPTRELAMQIERESERFGKSSKLKCACIYGGADKYSQRALLQQGVDVVIA 230 Query: 132 TPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFS 191 TPGRL+D L +V LVLDEADRMLDMGF IR++L ++ RQ L+FSAT+ Sbjct: 231 TPGRLIDFLESETTTLRRVTYLVLDEADRMLDMGFEIQIRKILGQIRPDRQTLMFSATWP 290 Query: 192 DDIKALAEKLLHN-PLEIEVARRNTA-SDQVTQHVHFVDKKRK-RELLSHMIGKGNWQQV 248 +++ LA+ N P+ +++ + A ++++ Q V+ D+ +K +L+ + +V Sbjct: 291 KNVQNLAQDYCKNTPVYVQIGKHELAINERIKQIVYVTDQSKKINQLIKQLDCLTQKDKV 350 Query: 249 LVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARG 308 L+F +TK G ++ LNK+G + AIHG+K+Q R + FKSG+ R+L+ATD+A+RG Sbjct: 351 LIFAQTKKGCESMSRILNKEGFKCLAIHGDKAQKDRDYVMNKFKSGECRILIATDVASRG 410 Query: 309 LDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCV-DEHKLLRDIEKLL--- 364 LD++++ HV NY+ P V EDYVHRIGRTGRA A G A+S + D+ K+ R+ ++L Sbjct: 411 LDVKDVSHVFNYDFPKVMEDYVHRIGRTGRAGAYGCAVSFLTFEDDKKISREYVQMLHDA 470 Query: 365 KKEIP 369 K+EIP Sbjct: 471 KQEIP 475 >UniRef50_C4LJP9 ATP-dependent RNA helicase n=15 Tax=Bacteria RepID=C4LJP9_CORK4 Length = 823 Score = 284 bits (727), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 147/362 (40%), Positives = 225/362 (62%), Gaps = 7/362 (1%) Query: 14 RAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGR 73 RAV + G+ P+PIQ IP + +GRD++ AQTGTGKTA F LP+L L Q + Sbjct: 167 RAVKKVGFETPSPIQAATIPILAQGRDVVGLAQTGTGKTAAFALPILSRLDRSQ-----K 221 Query: 74 RPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMMKLRGGVDVLVAT 132 +P +AL+L+PTRELA Q+ + ++++ +L + L ++GG S Q+ LR G ++V T Sbjct: 222 KP-QALVLSPTRELALQVADAFQEFADHLGGVHVLPIYGGQSYGIQLSGLRRGAHIVVGT 280 Query: 133 PGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSD 192 PGR++D + ++ L +++ LVLDEAD ML+MGF D+ R+L P +Q LFSAT Sbjct: 281 PGRVIDHLERGSLDLSELKYLVLDEADEMLNMGFQEDVERILADTPEHKQTALFSATMPA 340 Query: 193 DIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFT 252 I+ L+++ L +P E+ + + +D + Q V+ K + L+ ++ + +++F Sbjct: 341 SIRRLSKQYLEDPREVTIKSQQRTADNIHQQYLLVNHHYKLDALTRILEVTEFDAMIMFA 400 Query: 253 RTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIE 312 RTK LAE+L G +AAI+G+ +Q R R + + G + +LVATD+AARGLD+E Sbjct: 401 RTKQNTEELAEKLRARGFSAAAINGDMAQNQRERTVDQLRDGRLDILVATDVAARGLDVE 460 Query: 313 ELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIA 372 + HVVNY++P+ E YVHRIGRTGRA +GEA+ V E +LLR IE+ K I + Sbjct: 461 RISHVVNYDIPHDTESYVHRIGRTGRAGRSGEAILFVTPRERRLLRSIERATKSSIEEMQ 520 Query: 373 IP 374 +P Sbjct: 521 LP 522 >UniRef50_D0MZ17 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MZ17_PHYIN Length = 2091 Score = 284 bits (726), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 152/377 (40%), Positives = 228/377 (60%), Gaps = 14/377 (3%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 + G S +L+ + + GY EP IQ+QA+PA++ GRD++ A+TG+GKT F LP+ +H Sbjct: 1492 WTQCGFSVRMLQLIKKHGYEEPFAIQKQALPAIMSGRDVIGIAKTGSGKTLAFLLPMFRH 1551 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 ++ + P + P+ +I+ P RELA QI R +SK L +R+ V+GG S++ Q+ L Sbjct: 1552 VLAQPPLQENEGPI-GIIMAPARELAQQIYVEARKFSKGLGLRATAVYGGSSVSEQIANL 1610 Query: 123 RGGVDVLVATPGRLLDLEHQNA---VKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 + G D+++ TPGR++D+ +A V L +V +VLDEADRM DMGF I +++ + Sbjct: 1611 KRGSDIVICTPGRMIDILCMSAGKMVSLQRVTYVVLDEADRMFDMGFEPQITKIMMNIRP 1670 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ LLFSATF +++LA K+L P+EI V R+TAS +TQ+V ++ K L + Sbjct: 1671 DRQTLLFSATFPRSVESLARKVLKKPVEITVGTRSTASGDITQYVEVREEDDKFMRLLQL 1730 Query: 240 IG----KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295 +G KGN +LVF + + + + L K G + ++HG K Q R + DFK Sbjct: 1731 LGLWYEKGN---ILVFVNKQQACDQIFQDLMKAGYPALSLHGGKDQVDRDYTIDDFKRKV 1787 Query: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK 355 V+VAT +A RGLD+++L V+NY PN EDYVHR+GRTGRA G A + + DE + Sbjct: 1788 RTVMVATSVAGRGLDVKDLVLVINYHCPNHMEDYVHRVGRTGRAGRKGTAYTFISPDEEE 1847 Query: 356 LLRDIEKLL---KKEIP 369 D+ K L K+ IP Sbjct: 1848 YSVDLVKALENAKQTIP 1864 >UniRef50_A5FH88 DEAD/DEAH box helicase domain protein n=21 Tax=Bacteroidetes RepID=A5FH88_FLAJ1 Length = 634 Score = 284 bits (726), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 145/374 (38%), Positives = 230/374 (61%), Gaps = 8/374 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLE-GRDLMASAQTGTGKTAGFTLPLLQ 61 F+ LGL+ +L+A+ + G+ P+ +Q++AIP +LE D++A AQTGTGKTA F PL+Q Sbjct: 4 FEQLGLNESLLKAILDLGFENPSEVQEKAIPLLLEKDTDMVALAQTGTGKTAAFGFPLIQ 63 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMM 120 + R +AL+L+PTREL QI +++YSKY I + V+GG SI Q Sbjct: 64 KI------DADNRNTQALVLSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQAR 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +++ G ++VATPGR+ D+ ++ V + ++ +LDEAD ML+MGF DI +L+ P + Sbjct: 118 EIKRGAQIIVATPGRMQDMINRGLVNIKNIDYCILDEADEMLNMGFYEDIVSILSDTPDQ 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 + LFSAT ++ +A++ + P+EI V +N+ S V+ + V+ + + E L + Sbjct: 178 KNTWLFSATMPQEVARIAKQFMSEPVEITVGAKNSGSATVSHEFYLVNARDRYEALKRLA 237 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 +VF RTK +AE+L +DG +AA+HG+ SQ R + F+ I++LV Sbjct: 238 DANPDIFSVVFCRTKRDTQAVAEKLIEDGYSAAALHGDLSQAQRDGVMKSFRGRQIQMLV 297 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+D++ + HVVNY+LP+ E Y HR GRTGRA G ++ +V E + + I Sbjct: 298 ATDVAARGIDVDNVTHVVNYQLPDEIETYNHRSGRTGRAGKLGTSIVIVTKSELRKISSI 357 Query: 361 EKLLKKEIPRIAIP 374 E+++K++ AIP Sbjct: 358 ERIIKQKFEEKAIP 371 >UniRef50_Q1J0S9 DEAD/DEAH box helicase-like protein n=2 Tax=Deinococcus RepID=Q1J0S9_DEIGD Length = 591 Score = 283 bits (725), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 158/365 (43%), Positives = 228/365 (62%), Gaps = 8/365 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+FD L ++P++ +AE+G E +PIQ +++P L G+DL+ A+TGTGKT F LP++ Sbjct: 1 MNFDQL-IAPELAARLAERGITEASPIQAESLPHTLAGKDLIGRARTGTGKTLAFALPII 59 Query: 61 QHLIT---RQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINP 117 Q+L R +GR P RA+++ PTRELA Q+ E L+ ++ V+GG + P Sbjct: 60 QNLTAPDGRGSRERGRLP-RAIVIAPTRELAKQVAEEFSKSGPQLS--TVTVYGGAAYGP 116 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 Q LR GVDV+V TPGRL+D + + L ++ VLDEAD ML +GF I +L + Sbjct: 117 QENALRRGVDVVVGTPGRLIDHLERGNLDLSAIQYAVLDEADEMLSVGFADAIETILQQT 176 Query: 178 PAKRQNLLFSATFSDDIKALAEKLLHNPLEIE-VARRNTASDQVTQHVHFVDKKRKRELL 236 PA RQ +LFSAT +D+I LA K L P+ ++ V + + Q +H+ + + +L Sbjct: 177 PAARQTMLFSATLNDEIHRLARKYLREPVVVDLVGEGKSQAAQSVEHLKVKVGRTRTRVL 236 Query: 237 SHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 + ++ N ++ +VFTRTK A+ LA +L GI S A+HG+ +Q R RAL F+SG + Sbjct: 237 ADLLTVYNPEKAIVFTRTKREADELANELIHRGIESEALHGDLAQSQRERALGAFRSGRV 296 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 VLVATD+AARGLDI E+ VV Y LP PE YVHR GRTGRA TG A+ + E++ Sbjct: 297 GVLVATDVAARGLDIPEVDLVVQYHLPQDPESYVHRSGRTGRAGRTGTAIVMYGDRENRE 356 Query: 357 LRDIE 361 LR++E Sbjct: 357 LRNLE 361 >UniRef50_A2QC74 ATP-dependent RNA helicase dbp2 n=35 Tax=Eukaryota RepID=DBP2_ASPNC Length = 565 Score = 283 bits (725), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 154/379 (40%), Positives = 231/379 (60%), Gaps = 9/379 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD G +L V QG+ PT IQ Q P L GRD++ A+TG+GKT + LP + Sbjct: 138 TFDEAGFPQYVLSEVKAQGFDRPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIV 197 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + A G P+ LIL PTRELA QI + + K IR+ V+GGV PQ+ Sbjct: 198 HINAQPLLAPGDGPI-VLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRD 256 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GV+V +ATPGRL+D+ L +V LVLDEADRMLDMGF IR++++++ R Sbjct: 257 LSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDR 316 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRE-LLSHM 239 Q ++SAT+ +++ LA L++ +++ + + +A+ ++TQ V V KR+ ++ H+ Sbjct: 317 QTCMWSATWPKEVRQLASDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHL 376 Query: 240 --IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 I + + L+FT TK A+ + L +DG + +IHG+K Q R L +FK+G Sbjct: 377 EKIMENRANKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSP 436 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 ++VATD+A+RG+D+ ++ HV+NY+ PN EDYVHRIGRTGRA A G A++ D K Sbjct: 437 IMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNSKQA 496 Query: 358 RDIEKLL---KKEI-PRIA 372 RD+ +L K++I PR+A Sbjct: 497 RDLVTILTEAKQQIDPRLA 515 >UniRef50_B6K0K2 ATP-dependent RNA helicase Prp11 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K0K2_SCHJY Length = 1056 Score = 283 bits (724), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 155/371 (41%), Positives = 225/371 (60%), Gaps = 8/371 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 S+ GLS L + G+ EP+ IQ QAIPA+ GRD++ A+TG+GKT F LP+ + Sbjct: 460 SWSQCGLSVQTLSVIRSLGFEEPSAIQAQAIPAITAGRDVIGVAKTGSGKTIAFLLPMFR 519 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ ++P G PV A+I+TPTRELA QI + ++K L++R+ +GG I Q+ + Sbjct: 520 HIMDQRPLRNGEGPV-AVIMTPTRELAVQIFRECKPFAKALDLRATCAYGGAPIKDQIAE 578 Query: 122 LRGGVDVLVATPGRLLDLEHQNA---VKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ G +++V TPGR++D+ + N+ L + +VLDEADRM D+GF + R+L + Sbjct: 579 LKRGAEIVVCTPGRMIDVLNANSGRVTNLHRCTYVVLDEADRMFDLGFEPQVMRILNNIR 638 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ +LFSATF ++ALA K+L P+EI V R+ + +V Q V ++ K L Sbjct: 639 PDRQVVLFSATFPRAMEALARKVLKKPIEITVGGRSVVAAEVEQLVEVRSEESKFPRLLE 698 Query: 239 MIGK-GNWQ---QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSG 294 ++G+ N Q + LVF A+ L QL K G +IHG K Q R ++D+K G Sbjct: 699 LLGELYNTQPDVRTLVFVDRHESADALLSQLMKRGYSCNSIHGGKDQHDRDSTISDYKMG 758 Query: 295 DIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEH 354 VL+AT +AARGLD++ L VVNY+ PN EDYVHR+GRTGRA TG A++ V D+ Sbjct: 759 IFDVLIATSVAARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFVTPDQS 818 Query: 355 KLLRDIEKLLK 365 + I K LK Sbjct: 819 RYAVGIAKALK 829 >UniRef50_B7IA63 DEAD/DEAH box helicase n=17 Tax=Acinetobacter RepID=B7IA63_ACIB5 Length = 615 Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 155/385 (40%), Positives = 237/385 (61%), Gaps = 11/385 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L + +A+ G+ PTP+Q+Q+IPA LEG+DL+ S+QTG+GKTA F LP L Sbjct: 4 TFAEFSLHETLQQALEGLGFTNPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTLH 63 Query: 62 HLITRQPHAKGRRPVRA------LILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVS 114 +L + + ++A L+L PTRELA Q+ ++ + +++ +R + GG+ Sbjct: 64 NLAGQDTFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGMP 123 Query: 115 INPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVL 174 Q+ +L+G V+VATPGRLLDL ++ +KLD+V+ L++DEADRMLD+GF D+ + Sbjct: 124 FGKQIQQLKG-AQVVVATPGRLLDLVNRRQLKLDKVDALIVDEADRMLDLGFSEDLE-AI 181 Query: 175 TKLPAKR-QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRK 232 + L A R Q L+FSATF+D I LAE++++ P I + ++ + +TQ +H+ D + K Sbjct: 182 SDLAANRGQTLMFSATFADRIIRLAERMMNEPERIAIETGHSTNTDITQTLHWTDGFEHK 241 Query: 233 RELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFK 292 ++LL+H + Q +VF T+ + LAE+L + G A+HG Q R R L + Sbjct: 242 KKLLTHWLADETLDQAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTVRNRRLRSIR 301 Query: 293 SGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVD 352 G ++LVATD+AARGLD+ + HV+N+ LP EDYVHRIGRTGRA TG+A++L Sbjct: 302 EGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTGQAITLATYR 361 Query: 353 EHKLLRDIEKLLKKEIPRIAIPGYE 377 E +R +E L+ + I G E Sbjct: 362 ERGKIRALEDYLEARLNVSEIEGLE 386 >UniRef50_D2I3Z4 Putative uncharacterized protein (Fragment) n=2 Tax=Amniota RepID=D2I3Z4_AILME Length = 645 Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 147/365 (40%), Positives = 229/365 (62%), Gaps = 3/365 (0%) Query: 4 DSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHL 63 D+ P+++ ++ G+++PTPIQ QA P +L+G DL+ AQTGTGKT + +P HL Sbjct: 244 DAFHPYPELIESIKRAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHL 303 Query: 64 ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLR 123 + + R L+LTPTRELA Q+ YS Y ++S+ +FGG + Q+ + Sbjct: 304 NNQPISREERNGPGMLVLTPTRELALQVEAECSKYS-YKGLKSICIFGGRNREQQIRDIT 362 Query: 124 GGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQN 183 G+D+++ATPGRL L+ N V L + LVLDEAD+MLD+GF H I ++L + RQ Sbjct: 363 KGIDIIIATPGRLNYLQMNNFVNLQSITYLVLDEADKMLDLGFEHQIMKILLDVRPDRQT 422 Query: 184 LLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMIGK 242 ++ SAT+SD I L + L P+ + V + A + VTQ+V ++ KR LL + Sbjct: 423 VMISATWSDTIHQLGQSYLKEPMIVYVGTLDLVAVNTVTQNVIITTQEEKRSLLQEFLQN 482 Query: 243 GNWQ-QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + Q +V+VF R + A+ L+ L+ GI ++HG++ Q R RAL DF+SG ++VL+A Sbjct: 483 RSPQDKVIVFVRRRLVADDLSSDLSIQGITVQSLHGDRDQHDRERALEDFRSGKVKVLIA 542 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+A+RGLD+ ++ HV NY+ P E+YVHR+GRTGRA TG +++L+ ++ K+ ++ Sbjct: 543 TDLASRGLDVNDITHVYNYDFPRNIEEYVHRVGRTGRAGKTGLSITLMTQNDWKIATELI 602 Query: 362 KLLKK 366 K+LK+ Sbjct: 603 KILKR 607 >UniRef50_D1Y000 ATP-dependent RNA helicase DeaD family protein n=2 Tax=Prevotella RepID=D1Y000_9BACT Length = 589 Score = 283 bits (723), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 156/401 (38%), Positives = 235/401 (58%), Gaps = 17/401 (4%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M FD L L+ ++L A+ + + E TP+Q+Q IP +L+G+D++A AQTGTGKTA + LP+L Sbjct: 1 MYFDELDLNDNVLDALYDMHFDECTPVQEQCIPHILKGKDILAVAQTGTGKTAAYLLPIL 60 Query: 61 QHLITRQPHAKGRRP---VRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSIN 116 L A G P + LI++PTRELA QI + ++ +S YLN + + V+GG N Sbjct: 61 SKL------ADGGYPEDAINCLIMSPTRELAQQIDQGMQGFSYYLNGVSCVAVYGGNDGN 114 Query: 117 ---PQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRV 173 ++ L G DV++ATPGR + V L +V VLDEADRMLDMGF DI+ + Sbjct: 115 RYDQEIKSLALGADVIIATPGRFISHISLGNVDLSKVSFFVLDEADRMLDMGFSEDIKTI 174 Query: 174 LTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKR 233 KLP+ Q ++FSAT I+ LA+ LL P +++A A +++ Q + + +K Sbjct: 175 AKKLPSTCQTIMFSATMPSKIEDLAKTLLKEPEMVKLAVSKPA-EKIQQSAYVCYETQKI 233 Query: 234 ELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKS 293 E++ + G+ +V++F+ +K +A LN+ I +H + Q R + FKS Sbjct: 234 EIIKDIFKAGDLHRVIIFSGSKQKVKQIASSLNRKHINCGEMHSDLDQAQRDDVMFKFKS 293 Query: 294 GDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDE 353 G I VLVATDI ARG+DI+++ V+NY++P+ EDYVHRIGRT RA G A++ V D+ Sbjct: 294 GQIDVLVATDIVARGIDIDDITMVINYDVPHDVEDYVHRIGRTARADRDGVAITFVNGDD 353 Query: 354 HKLLRDIEKLLKKEIPRIAIP---GYEPDPSIKAEPIQNGR 391 + IE L+K I + +P G P+ P +N + Sbjct: 354 IYYFQQIESFLEKTIEKNRLPEALGEGPEYKSNGRPSKNKK 394 >UniRef50_Q9GNP1 Vasa homolog n=25 Tax=Eumetazoa RepID=Q9GNP1_CIOSA Length = 770 Score = 283 bits (723), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 169/411 (41%), Positives = 245/411 (59%), Gaps = 18/411 (4%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ GL +L V Y PTP+Q+ +IP + RDLMA AQTG+GKTA F LP+L Sbjct: 314 TFEVAGLPETVLANVKRANYERPTPVQKYSIPIINADRDLMACAQTGSGKTAAFLLPVLT 373 Query: 62 HLIT---RQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 LIT + ++ RA+++ PTREL QI R +S+ +R +V +GG S+N Q Sbjct: 374 KLITNGLQSSQFSEKQTPRAIVVGPTRELIYQIFLEARKFSRGTVVRPVVAYGGTSMNHQ 433 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTK-- 176 + L+ G +L+ATPGRL+D ++ V LD VE ++LDEADRMLDMGF +IR++ + Sbjct: 434 IRDLQRGCHILIATPGRLMDFINRGLVGLDHVEFVILDEADRMLDMGFETEIRKLASSPG 493 Query: 177 LPAK--RQNLLFSATFSDDIKALAEKLL-HNPLEIEVARRNTASDQVTQHVHFVDKKRKR 233 +P+K R L+FSATF D+I+ LA L + L + V R A VTQ + VD+ KR Sbjct: 494 MPSKSDRHTLMFSATFPDEIQRLAHDFLREDFLFLTVGRVGGACTDVTQSIIQVDQDDKR 553 Query: 234 ELLSHMIGK--GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADF 291 L +I + LVF TK GA+ LA L+++G + +IHG++ Q R +AL DF Sbjct: 554 AKLLELISDVAETRSRTLVFVETKRGADFLACMLSQEGCPTTSIHGDRLQQEREQALRDF 613 Query: 292 KSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCV 351 KS +L+AT +AARGLDI ++ HV+NY++P ++YVHRIGRTGR G A + Sbjct: 614 KSAVCPILIATSVAARGLDIPKVEHVINYDMPKEIDEYVHRIGRTGRCGNLGRATTF--Y 671 Query: 352 DEHK---LLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGR 399 D +K L R + K+L + + +PG+ + + A G++ G GGR Sbjct: 672 DNNKDGELARSLVKILSE--AQQEVPGWLEECAESAVGSSFGKEG-GFGGR 719 >UniRef50_Q5N7W4 DEAD-box ATP-dependent RNA helicase 30 n=3 Tax=Oryza sativa Japonica Group RepID=RH30_ORYSJ Length = 666 Score = 282 bits (722), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 154/400 (38%), Positives = 239/400 (59%), Gaps = 16/400 (4%) Query: 10 PD-ILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQP 68 PD ++A+A+ G+ EPTPIQ Q P L+GRD++ AQTG+GKT + LP L H+ + Sbjct: 259 PDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPR 318 Query: 69 HAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDV 128 +G P+ LIL PTRELA QI + + Y RS ++GG PQ+ LR GV++ Sbjct: 319 LEQGDGPI-VLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEI 377 Query: 129 LVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSA 188 ++ATPGRL+D+ L +V LVLDEADRMLDMGF IR+++ ++ RQ L +SA Sbjct: 378 VIATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSA 437 Query: 189 TFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMIGK-GNWQ 246 T+ ++++LA + L NP ++ + + A+ + Q + + + K LS ++ + Sbjct: 438 TWPREVESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLSDLMDGS 497 Query: 247 QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAA 306 ++L+F +TK + + QL DG + +IHG+K+Q R LA+FKSG ++ ATD+AA Sbjct: 498 RILIFFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAA 557 Query: 307 RGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKK 366 RGLD++++ V+N++ P EDY+HRIGRTGRA A+G A + + K R++ K+L++ Sbjct: 558 RGLDVKDIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAKFSRNLVKILRE 617 Query: 367 EIPRIAIPGYEPDPSIKAEPIQNGRQQRGGG---GRGQGG 403 G +P++ E + GGG RG+GG Sbjct: 618 A-------GQVVNPAL--ESMAKSASSMGGGNFRSRGRGG 648 >UniRef50_Q0ST49 ATP-dependent RNA helicase, DEAD/DEAH box family n=23 Tax=cellular organisms RepID=Q0ST49_CLOPS Length = 528 Score = 282 bits (722), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 151/375 (40%), Positives = 222/375 (59%), Gaps = 5/375 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + FD LGL +L+A+ + G+ EP+ IQ ++IP LEG D++ AQTGTGKTA F + Sbjct: 4 IKFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAI- 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 I + ++ +ALIL PTRELA Q+ E + K+ + L ++GG I+ Q+ Sbjct: 63 ---INNADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIR 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GVD++V TPGR+LDL + ++ L+ + LVLDEAD ML+MGFI D+ ++ L Sbjct: 120 ALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTD 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKR-ELLSHM 239 RQ LLFSAT IK LA + + ++++ + + +F K R R E L + Sbjct: 180 RQTLLFSATMPPQIKKLARNYMKEDTKHIAIKKSSLTVSKIEQFYFEIKHRDRFETLCRV 239 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++F +TK G + + E++ G +HG+ SQ R + L FK G + L Sbjct: 240 LDFDEPNAAIIFCKTKKGVDEVVEKMQARGYMVEGMHGDMSQNHRLQTLRKFKEGSLDFL 299 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+E + HV+NY+LP E YVHRIGRTGRA G A SLV E+ +L+ Sbjct: 300 VATDVAARGIDVESVTHVINYDLPQDNESYVHRIGRTGRANREGVAYSLVTPKEYMMLKQ 359 Query: 360 IEKLLKKEIPRIAIP 374 I+K K +I R A+P Sbjct: 360 IQKHTKSKIIRKAVP 374 >UniRef50_C5S9J5 DEAD/DEAH box helicase domain protein n=6 Tax=Gammaproteobacteria RepID=C5S9J5_CHRVI Length = 683 Score = 282 bits (722), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 169/442 (38%), Positives = 239/442 (54%), Gaps = 47/442 (10%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 FDSL L P IL +AE G+ + TPIQ + +P L+G D+ AQTGTGKTA F + L+Q Sbjct: 11 FDSLALDPRILAGLAEAGFTQCTPIQAETLPIALQGHDIAGQAQTGTGKTAAFLVALMQR 70 Query: 63 LITRQPHA------KGRRPVRA------------------------------------LI 80 L+ P A PV A L+ Sbjct: 71 LLHEPPEAMPESAAAPETPVSADGSPETESLDPANALEAESEPESAPAPARRRRGPRALV 130 Query: 81 LTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLE 140 L PTRELA QI ++ +K+ +RS VV+GG Q +L GVD+L+ TPGRL+D Sbjct: 131 LAPTRELAVQIHKDTLALAKHTGLRSTVVYGGTGYQQQRDELAAGVDILIGTPGRLIDYY 190 Query: 141 HQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNL--LFSATFSDDIKALA 198 Q+ L ++E++VLDEADRM D+GFI DIR + ++P Q L LFSAT S + LA Sbjct: 191 KQHVFDLKRIEVVVLDEADRMFDLGFIKDIRYLFRQMPPVEQRLGMLFSATLSYRVTELA 250 Query: 199 EKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGA 258 + +++P +++ +D+V Q + + K LL +I +++VF TK A Sbjct: 251 YEHMNHPRLVKIETEQVTADRVRQVCYMTANEEKIPLLLGLIRGWPDGRIIVFVNTKREA 310 Query: 259 NHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVV 318 + + L +GI +A + G+ Q R + L DF +G + VLV TD+AARGL I ++ HVV Sbjct: 311 DRVWGYLQGNGIDTAVLSGDVPQPKRLKLLRDFTNGTLPVLVGTDVAARGLHIPDVTHVV 370 Query: 319 NYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAI-PGY- 376 NY+LP PEDYVHRIGRT RA A G+A+S VC L DIE+ + ++P + P Sbjct: 371 NYDLPEDPEDYVHRIGRTARAGAAGDAVSFVCETYAFCLLDIEQYIGIKVPVEPVDPALL 430 Query: 377 -EPDPSIKAEPIQNGRQQRGGG 397 E DP + P + R++R G Sbjct: 431 AEVDPRSRIRPDRADREERRDG 452 >UniRef50_A6LBU1 ATP-dependent RNA helicase n=29 Tax=Bacteroidales RepID=A6LBU1_PARD8 Length = 426 Score = 282 bits (721), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 160/436 (36%), Positives = 247/436 (56%), Gaps = 41/436 (9%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M FD L L +L + + + E TP+Q+ IP +LEG+D++A AQTGTGKTA + LP++ Sbjct: 1 MRFDELDLEDAVLDGLYDMNFDETTPVQELTIPVILEGKDIIACAQTGTGKTAAYVLPVI 60 Query: 61 QHLITRQPHAKGRRP---VRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGG---V 113 L +KG P V A+I+ PTRELA QI + ++ ++ ++ ++ ++ V+GG + Sbjct: 61 NEL------SKGCHPTDAVNAVIMAPTRELAQQIDQQIQGFTYFIPSVSAVAVYGGTDGI 114 Query: 114 SINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRV 173 + Q L G D+++ATPGRLL V L +V VLDEADRMLDMGF DI +V Sbjct: 115 AWEQQKRGLEMGADIVIATPGRLLSHIKLGTVDLSKVSFFVLDEADRMLDMGFYDDIMQV 174 Query: 174 LTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKR 233 +LP Q ++FSAT I+ LA+ +L +P E+++A + + + Q + +K Sbjct: 175 HKQLPPYCQTIMFSATMPPKIRTLAKTILKDPEEVKIAI-SRPPESIMQTAYICYDPQKL 233 Query: 234 ELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKS 293 ++L + + Q+V++F+ +K LA L + AA+H + Q R + +FKS Sbjct: 234 KILQDLFTQSRPQRVIIFSSSKMKVKELASTLKRLKFNVAAMHSDLEQSQREEVMKEFKS 293 Query: 294 GDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAA-ATGEALSLVCVD 352 G I +LVATD+ ARG+DI ++ VVN+++P+ PEDYVHRIGRT R G A++ V +D Sbjct: 294 GHIDILVATDVVARGIDINDIKLVVNFDIPHDPEDYVHRIGRTARGTNGEGLAITFVSID 353 Query: 353 EHKLLRDIEKLLKKEIPRI-------AIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGR 405 E + IE L+KE+ +I +P YEP ++ G RG+G Sbjct: 354 EQAQFKRIEDFLEKEVYKIPVSPEFGEVPLYEP-------------EKYGMNKRGRG--- 397 Query: 406 GQQQPRRGEGGAKSAS 421 +PR+ E S+S Sbjct: 398 ---RPRKSEDKGSSSS 410 >UniRef50_C9DQK7 VASA DEAD-box protein n=5 Tax=Chordata RepID=C9DQK7_9ASCI Length = 851 Score = 281 bits (720), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 173/414 (41%), Positives = 245/414 (59%), Gaps = 23/414 (5%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF++ L I V Y PTP+Q+ ++P +L RDLMA AQTG+GKTA F LP+L Sbjct: 385 SFEAANLPETIAANVKRANYDSPTPVQKFSLPIILADRDLMACAQTGSGKTAAFLLPVLT 444 Query: 62 HLI----TRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINP 117 +L+ ++ + P +A+I+ PTREL QI R +S+ IR +V +GG S N Sbjct: 445 NLVRTGLASSSFSEKQLP-QAIIVGPTRELVYQIYLEARKFSRGTIIRPVVAYGGTSTNY 503 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTK- 176 Q+ +L+ G +L+ATPGRL+D ++ + L V+ ++LDEADRMLDMGF +IR+++ Sbjct: 504 QLKELQKGCHLLIATPGRLMDFINRGKIGLSSVQYIILDEADRMLDMGFETEIRKLVDSP 563 Query: 177 -LPAK--RQNLLFSATFSDDIKALAEKLL-HNPLEIEVARRNTASDQVTQHVHFVDKKRK 232 +PAK R L+FSATF D+I+ LA L + L + V R A VTQ V VD+ K Sbjct: 564 GMPAKNERHTLMFSATFPDEIQKLAHDFLREDFLFLTVGRIGGACSDVTQVVLQVDQGDK 623 Query: 233 R----ELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRAL 288 R ELL+ + G+ + LVF TK A+ LA L ++G + +IHG++ Q R AL Sbjct: 624 RNKLIELLADVADTGS--RTLVFVETKRSADFLACSLCQEGYPTTSIHGDRLQQEREEAL 681 Query: 289 ADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSL 348 DFKSG +LVAT +AARGLDI ++ HVVNY+LP+ ++YVHRIGRTGR G A S Sbjct: 682 RDFKSGKCPILVATSVAARGLDIPKVEHVVNYDLPSEVDEYVHRIGRTGRCGNLGRATSF 741 Query: 349 VCVDEH---KLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGR 399 D+ L R + K+L I +P + + + A G+ + G GGR Sbjct: 742 --YDDSANASLARSLVKILADSIQE--VPSWLEECAESAVGTSFGKDRGGFGGR 791 >UniRef50_UPI00016C5336 ATP-dependent RNA helicase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5336 Length = 523 Score = 281 bits (720), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 151/378 (39%), Positives = 224/378 (59%), Gaps = 7/378 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L L ++ A+ GY+ PTPIQ+ IP L G+D++ AQTGTGKTA F +P L Sbjct: 86 MLFADLKLMRPLMDAITAAGYKNPTPIQENVIPPALRGKDVIGQAQTGTGKTAAFLIPFL 145 Query: 61 QHLITRQPHA-KGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 +PH KG P+ +++TPTRELA QI + R + V+GG + Q+ Sbjct: 146 NRW---RPHTLKG--PI-GVVMTPTRELALQIANEAEKLAPSKRFRCVPVYGGTGMQRQL 199 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L G D++V TPGR+LD + ++ L QV VLDEADRMLD+GF DI R+L + P+ Sbjct: 200 DGLTRGCDLVVGTPGRMLDHLQRGSMSLSQVRYAVLDEADRMLDIGFRDDIERILKRCPS 259 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ LL SAT D IK L + + +P+ + + D++ Q VD+ RK ELL + Sbjct: 260 ERQTLLMSATVPDSIKRLVNRYMRDPVHLHMMPEKPTVDKIRQSYFTVDQDRKFELLKRV 319 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + +Q L+F K A++L L + ++A IHG+ Q R + +A F++ DI+ L Sbjct: 320 VEREKPRQCLIFVERKRWADNLYRDLKRAVPKAAVIHGDLPQSQREKIMAAFRTADIKYL 379 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 +ATD+ +RG+D+ L HV+NY+LP E+YVHRIGRTGR G A+S V ++ + L + Sbjct: 380 IATDVMSRGIDVSGLSHVINYDLPMDIENYVHRIGRTGRIGKDGIAISFVLPEQGEHLTN 439 Query: 360 IEKLLKKEIPRIAIPGYE 377 IE ++ + I + G+E Sbjct: 440 IEMMINRLIEEDRVEGFE 457 >UniRef50_A5EYB1 ATP-dependent rna helicase Rhl n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EYB1_DICNV Length = 432 Score = 281 bits (720), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 146/370 (39%), Positives = 222/370 (60%), Gaps = 4/370 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F + +L A+ + + + TPIQ Q +P L G D+M AQTGTGKTA F L L+ + Sbjct: 11 FTDFPIHSALLEALEDIHFTKTTPIQAQTLPLTLAGYDVMGIAQTGTGKTAAFLLSLMHY 70 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 L+T H K + P A++L PTRELA QI + + Y + SL ++GG SI Q Sbjct: 71 LMTNPVHPKAKGP-WAIVLAPTRELAIQIKKEMDLLGAYTGLVSLAIYGGTSIEHQKKLF 129 Query: 123 RG-GVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP--A 179 + VDV++ TPGR++DL Q +L +E+ VLDEADRM D+GFI D+R +L ++P Sbjct: 130 QACNVDVIIGTPGRIIDLFKQKVFRLKNIEVCVLDEADRMFDLGFIDDVRYLLRQMPPAY 189 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +R NLLFSAT ++ LA + + P + + + T ++ +T +++ K K LL + Sbjct: 190 ERLNLLFSATMPQKVQELAYEHFNAPKVVAIESQQTTANNITHYLYHTAKHEKTPLLLGL 249 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++ ++F TKH L+ L +G +AA+ G+ +Q R + + DF+ G + ++ Sbjct: 250 FARERPERSMIFLNTKHDLERLSLVLTANGYHNAALSGDVAQKKREQIIRDFQEGTVNIV 309 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+ I+ + HV NY+LP + EDYVHRIGRT RA A+G A+S C + L + Sbjct: 310 VATDVAARGIHIDGITHVFNYDLPQIAEDYVHRIGRTARAGASGTAISFACEEYVYSLPE 369 Query: 360 IEKLLKKEIP 369 IE L ++IP Sbjct: 370 IEHFLGEKIP 379 >UniRef50_C1CWT4 Putative DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Deinococcus deserti VCD115 RepID=C1CWT4_DEIDV Length = 602 Score = 281 bits (719), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 155/365 (42%), Positives = 229/365 (62%), Gaps = 9/365 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+FD L ++P++ +AE+G E +PIQ +++P L GRD++ A+TGTGKT F LP++ Sbjct: 1 MNFDQL-IAPELAARLAERGITEASPIQAESLPLTLAGRDMIGRARTGTGKTLAFALPII 59 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKY-LNIRSLVVFGGVSINPQM 119 Q L +P + RP RA+++ PTRELA Q+ E ++SK + + ++ V+GG S PQ Sbjct: 60 QKL---EPSRERARPPRAIVVAPTRELAKQVAE---EFSKSGVGLTTVTVYGGASYAPQE 113 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 LR GVDV+V TPGRL+D + + L VE VLDEAD ML +GF I +L K P Sbjct: 114 NALRRGVDVVVGTPGRLIDHLERGNLDLSAVEFAVLDEADEMLSVGFADAIETILQKTPD 173 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIE-VARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ +LFSAT ++DI L+ L P+ ++ V + + Q +H+ + + +L+ Sbjct: 174 SRQTMLFSATLNNDINRLSRNYLREPVIVDMVGEGKSQAAQTVEHLKVRVGRSRTRVLAD 233 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ N ++ +VFTRTK A+ LA +L G+ + A+HG+ +Q R RAL F+SG + V Sbjct: 234 LLTIYNPEKAIVFTRTKREADELANELIHRGLEAEALHGDLAQSQRERALGAFRSGRVGV 293 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLDI E+ VV Y LP PE YVHR GRTGRA TG A+ + E++ + Sbjct: 294 LVATDVAARGLDIPEVDLVVQYHLPQDPESYVHRSGRTGRAGRTGTAIIMYGDRENREVM 353 Query: 359 DIEKL 363 +E++ Sbjct: 354 GLERI 358 >UniRef50_A8WWC4 C. briggsae CBR-VBH-1 protein n=2 Tax=Caenorhabditis briggsae RepID=A8WWC4_CAEBR Length = 692 Score = 281 bits (719), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 163/401 (40%), Positives = 234/401 (58%), Gaps = 33/401 (8%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F G P ++ V GY +PTP+Q+ +IP +L RDLM+ AQTG+GKTA F LP++Q Sbjct: 164 NFSDAGFGPAVMENVTRSGYTKPTPVQKHSIPTLLFNRDLMSCAQTGSGKTAAFLLPIIQ 223 Query: 62 HLITRQP----------------------HAKGRRPV--RALILTPTRELAAQIGENVRD 97 H++ P GRR AL+L+PTRELA QI + Sbjct: 224 HIMAGGPDMIKTVSSATNIFGFKVILQPTFNNGRRTYYPSALVLSPTRELAIQIHKEAAK 283 Query: 98 YSKYLNIRSLVVFGG-VSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLD 156 +S N+++ +++GG + Q+ +LR GV +L+ATPGRL+D+ Q + L LVLD Sbjct: 284 FSYKTNLQTAILYGGRENYRDQVNRLRSGVHILIATPGRLIDIIEQGFIGLSGCRYLVLD 343 Query: 157 EADRMLDMGFIHDIRRVLTK-LPAK--RQNLLFSATFSDDIKALAEKLL-HNPLEIEVAR 212 EADRMLDMGF IR+++ + +P K R +FSATF +I+ LA+ L N + + V R Sbjct: 344 EADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQLLAKDFLKENYVFLAVGR 403 Query: 213 RNTASDQVTQHVHFVDKKRKRE-LLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIR 271 + S+ + Q + +V++ KR+ L+ ++ + VLVF TK GAN LA LN+ IR Sbjct: 404 VGSTSENIEQRLLWVNEMEKRQNLMDILMNEDATNLVLVFVETKRGANELAYFLNRQQIR 463 Query: 272 SAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVH 331 S +IHG+ Q R R L F+SG +LVAT +AARGLDI + HVVNY+LP ++YVH Sbjct: 464 SVSIHGDLKQIERERNLEMFRSGQFPILVATAVAARGLDIPNVRHVVNYDLPGDSDEYVH 523 Query: 332 RIGRTGRAAATGEALSLVCVDEHKLLRDIEKLL---KKEIP 369 RIGRTGR G A S + RD++ L+ +E+P Sbjct: 524 RIGRTGRCGNLGIATSFFNDKNRGIGRDLKTLIMEANQEVP 564 >UniRef50_C7RHZ9 DEAD/DEAH box helicase domain protein n=3 Tax=Anaerococcus RepID=C7RHZ9_ANAPD Length = 536 Score = 281 bits (719), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 145/375 (38%), Positives = 226/375 (60%), Gaps = 8/375 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+ L + +ILRA+ + GY +P+PIQ+++IP +LEG DL+ +QTG+GKTA F +P++ Sbjct: 1 MKFNELNIGNEILRAIDDLGYEKPSPIQEESIPHLLEGNDLIGKSQTGSGKTAAFAIPII 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 +++ A G +ALIL PTREL Q+ + + KY I+ L V+GG I Q+ Sbjct: 61 ENI-----EANG--ITQALILCPTRELCIQVSKEIEKLYKYKKEIKILSVYGGSHIVRQI 113 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ GV+++V TPGRL+DL + +KLDQ++ +VLDEAD M DMGF D++ +L + Sbjct: 114 KSLKKGVEIVVGTPGRLMDLMRRKVLKLDQLKTVVLDEADEMFDMGFRDDMKFILDRTNP 173 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ FSAT +I+ ++ NP E+++ + D++ Q+ + + K E L + Sbjct: 174 NRQTCFFSATMGPEIQEFSKLYQTNPYEVKIKSKEVTVDRIDQYYIKLKESMKEEALMRL 233 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + +VF TK + L E L K +HG+ Q +R + + F++ I++L Sbjct: 234 LEIHKANLAIVFCNTKRKVDRLVESLTKKNYLVDGLHGDLKQSSRDQVMKKFRNKTIQIL 293 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARGLD++++ V NY+LP + E YVHRIGRT RA +G + SL+ ++ LR Sbjct: 294 VATDIAARGLDVDDVDIVFNYDLPQLDEYYVHRIGRTARAGKSGLSFSLISGRDNNRLRQ 353 Query: 360 IEKLLKKEIPRIAIP 374 IE K I ++ +P Sbjct: 354 IENYTKANIKQMPVP 368 >UniRef50_Q31EF0 ATP-dependent RNA helicase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EF0_THICR Length = 401 Score = 281 bits (719), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 164/382 (42%), Positives = 230/382 (60%), Gaps = 7/382 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F+ L L P +L A+ EQ Y +PTPIQ +AIP +L +D++A A TGTGKTA F LP L Sbjct: 1 MTFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPAL 60 Query: 61 QHLITR-QPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 Q L+ +P R+P R LIL PTRELA QI + V+ + S VV GG + + Q+ Sbjct: 61 QFLLDDPRP---SRKP-RVLILAPTRELAFQIHKVVKQLGAHCPFESNVVTGGFASDKQL 116 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ +D+LVATPGRLL++ + + L +E+L++DEADRMLDMG D+ ++ +P Sbjct: 117 EILQSKIDILVATPGRLLNIMSKEFIDLSDIELLIIDEADRMLDMGQGPDVLALIEAIPG 176 Query: 180 KRQNLLFSATFSDD-IKALAEKLLHNPLEIEVARRNTASDQVTQHVHFV-DKKRKRELLS 237 Q FSAT + I AE++L +P I+V N S+Q+ Q V+ DK K+ LL Sbjct: 177 DFQAACFSATLAGSGITKFAEEVLDSPEIIQVNAPNEKSEQIQQWVYLANDKAHKKALLK 236 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++ Q +VF K A LA+ L + I S +HG+ Q R FK G I+ Sbjct: 237 AILEDETCQSAIVFCNKKDRAIELADWLQNEHISSTVLHGDFIQAKRLEKTQKFKQGKIK 296 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 VLVATD+AARGLDI + HV+NY++P + Y+HRIGRTGRA G A++LV + L Sbjct: 297 VLVATDVAARGLDILNVTHVINYDVPYRGDIYIHRIGRTGRAQQVGIAINLVERHDITNL 356 Query: 358 RDIEKLLKKEIPRIAIPGYEPD 379 + IE L++ +P I G EP+ Sbjct: 357 QRIEYHLQQSLPVSKIKGLEPN 378 >UniRef50_Q4PFD9 Pre-mRNA-processing ATP-dependent RNA helicase PRP5 n=1 Tax=Ustilago maydis RepID=PRP5_USTMA Length = 1156 Score = 280 bits (717), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 149/371 (40%), Positives = 225/371 (60%), Gaps = 9/371 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 + GL L + GY PTPIQ QA+PA++ GRD++ A+TG+GKT F LP+ +H Sbjct: 478 WSHCGLPASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRH 537 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + ++P PV +I+TPTRELA QI +R + K L +R+ V+GG I+ Q+ ++ Sbjct: 538 IKDQRPVEPSEGPV-GIIMTPTRELAVQIYREMRPFIKALGLRAACVYGGAPISEQIAEM 596 Query: 123 RGGVDVLVATPGRLLDLEHQNA---VKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 + D++VATPGRL+DL N+ L +V LVLDEADRM DMGF + ++L + Sbjct: 597 KKTADIVVATPGRLIDLLTANSGRVTNLYRVTYLVLDEADRMFDMGFEPQVMKILNNIRP 656 Query: 180 KRQNLLFSATFSDDIKALAEKLLHN-PLEIEVARRNTASDQVTQ--HVHFVDKKRKR--E 234 RQ +LFSATF +++LA K+L N PLEI V R+ + ++ Q V D K R E Sbjct: 657 DRQTVLFSATFPKQMESLARKVLKNKPLEITVGGRSVVAAEIEQIVEVRSEDTKFHRLLE 716 Query: 235 LLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSG 294 +L + + + L+F + A+ L + L + G + ++HG K Q R ++DFK+G Sbjct: 717 ILGELYNREKDARTLIFVDRQEAADDLLKDLIRKGYVTMSLHGGKDQVDRDETISDFKAG 776 Query: 295 DIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEH 354 ++ ++ AT +AARGLD+++L V+NY++PN EDYVHR GRTGRA G ++ + ++ Sbjct: 777 NVPIVTATSVAARGLDVKQLKLVINYDVPNHMEDYVHRAGRTGRAGQKGTCITFITPEQD 836 Query: 355 KLLRDIEKLLK 365 + RDI LK Sbjct: 837 RYARDIIAALK 847 >UniRef50_O97031 DjVLGA n=1 Tax=Dugesia japonica RepID=O97031_DUGJA Length = 726 Score = 280 bits (717), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 160/375 (42%), Positives = 225/375 (60%), Gaps = 13/375 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF L L P + ++ Y PTP+Q+ A+P +++ RDLMA AQTG+GKTA F +PLL Sbjct: 212 SFLELKLHPIVSHNISLTQYTRPTPVQRYAVPIIMQRRDLMACAQTGSGKTAAFLIPLLS 271 Query: 62 HLITRQP-----HA--KGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVS 114 + P H+ K PV ALIL PTRELA QI + R +S +R VV+GG Sbjct: 272 MMYQDGPGNSLSHSGYKKEYPV-ALILAPTRELAVQIYDEARKFSYRSLVRPCVVYGGRD 330 Query: 115 INPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVL 174 I Q+ + G ++LVATPGRL D+ + + LD + LVLDEADRMLDMGF IR+++ Sbjct: 331 IRGQLQDISQGCNMLVATPGRLSDMLERCKIGLDCIRYLVLDEADRMLDMGFEPQIRKIV 390 Query: 175 TKL----PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK 230 + P +RQ L+FSATF +I+ LA L + L + V + + S +TQ + +VD+ Sbjct: 391 EQTNMPPPGQRQTLMFSATFPREIQMLASDFLKDYLFLRVGKVGSTSQNITQRIVYVDEN 450 Query: 231 RKRE-LLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALA 289 KR+ LL + + +LVF TK GA+ L L+ +G A+IHG++SQ R AL Sbjct: 451 EKRDHLLDILTDIDSDSLILVFVETKRGADALEGFLHTEGSCVASIHGDRSQSDRELALQ 510 Query: 290 DFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLV 349 F+ G +LVAT +AARGLDI + V+NY+LP E+YVHRIGRTGR GEA+S Sbjct: 511 SFREGSTPILVATRVAARGLDIPNVKFVINYDLPTDIEEYVHRIGRTGRVGNLGEAISFY 570 Query: 350 CVDEHKLLRDIEKLL 364 + + +++ +L Sbjct: 571 TDKNNNVAKELVDIL 585 >UniRef50_Q54IV3 Probable ATP-dependent RNA helicase ddx42 n=3 Tax=Eukaryota RepID=DDX42_DICDI Length = 986 Score = 280 bits (717), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 147/351 (41%), Positives = 214/351 (60%), Gaps = 3/351 (0%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF G +L+A+A+Q PTPIQ+QAIP L GRDL+A A+TG+GKTA F P + Sbjct: 306 SFGHYGFDDILLQAIAKQSIETPTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPSIS 365 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ + KG P+ AL L PTRELA QI YSKY +++ V++GGVS Q + Sbjct: 366 HIMDQPYLEKGDGPI-ALFLAPTRELAHQIYLETLKYSKYFKLKTTVLYGGVSKQQQCKE 424 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G +++VATPGRL+D+ A KL++V LVLDEAD+M D GF + ++ + R Sbjct: 425 LKAGCEIIVATPGRLIDMIKLKATKLNRVSYLVLDEADKMFDFGFGPQVLSIVNHVRPDR 484 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFV--DKKRKRELLSHM 239 Q LLFSATF +++ A +L +P++I + +A+ +TQ V + D + L + + Sbjct: 485 QTLLFSATFKPNVEEFARTILSDPIKISIGMIGSANSDITQIVQVLKSDSDKWNWLTNQL 544 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + VL+F TK L+ L K G ++ +HG+K+Q R++ + FK G I +L Sbjct: 545 ALLLSQGSVLIFVSTKVAVEQLSSNLTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINIL 604 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC 350 +ATD+AARGLDI + +VVNY+ E + HRIGRTGRA TG A +L+ Sbjct: 605 IATDVAARGLDIPLIKNVVNYDTSRDIESHTHRIGRTGRAGNTGVAYTLIT 655 >UniRef50_A0M3C7 RhlE-like DEAD box family ATP-dependent RNA helicase n=10 Tax=Bacteroidetes RepID=A0M3C7_GRAFK Length = 455 Score = 280 bits (717), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 147/377 (38%), Positives = 232/377 (61%), Gaps = 8/377 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF L L+ + A+ + ++ PTPIQ+QA +++ GRD++ AQTGTGKT + LPLL Sbjct: 9 LSFQDLNLNTPLRNALEDLNFQTPTPIQEQAFSSIMSGRDVVGIAQTGTGKTFAYLLPLL 68 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L +++ + P R LI+ PTREL Q+ E + +KY+N+R V+GGV+IN Q Sbjct: 69 RML----KYSEQKNP-RILIMVPTRELVVQVVEEIEKLAKYINLRVAGVYGGVNINTQHQ 123 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L G+D++VATP RL DL + AV+L ++ V+DE D MLD+GF + ++ LP Sbjct: 124 DLMQGLDIVVATPRRLYDLVLRRAVQLKSIQKFVIDEVDVMLDLGFKFQVNNIIELLPKN 183 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFV-DKKRKRELLSHM 239 RQ+++FSAT ++ ++ + + P +I VA T + + Q + + + K LL H+ Sbjct: 184 RQSIMFSATMTETVEEMIDTNFKAPEKISVAVSGTPLENIDQRGYKIPNFYTKANLLKHL 243 Query: 240 IGKG-NWQQVLVFTRTKHGANHLAEQLNKDGI-RSAAIHGNKSQGARTRALADFKSGDIR 297 + +Q+VL+F K A+ L E L ++ ++ +H KSQ R +++ DF G R Sbjct: 244 LADTETYQKVLIFIGDKRIADRLYENLGEEFPGDTSLVHTGKSQNYRLKSVGDFDEGLSR 303 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +L+ATD+ ARGLDIE + HVVN++ P PE+Y+HRIGRTGRA G++L E + L Sbjct: 304 ILIATDVMARGLDIENVSHVVNFDTPQYPENYMHRIGRTGRAEKKGQSLLFTTEAEQEYL 363 Query: 358 RDIEKLLKKEIPRIAIP 374 IE+L++ E+P+ +P Sbjct: 364 DAIEELMQTEVPKYDLP 380 >UniRef50_B7S475 Predicted protein n=2 Tax=Bacillariophyta RepID=B7S475_PHATR Length = 575 Score = 280 bits (716), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 155/378 (41%), Positives = 224/378 (59%), Gaps = 9/378 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F I +A A+ G+ PT IQ QA P L+ +D++ A+TG+GKT GF LP+ Sbjct: 138 MEFKDAPFQERIQQAFAQAGFARPTSIQGQAWPIALQNKDMICVAKTGSGKTCGFLLPVF 197 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + +Q +G L+L PTREL+ QI E + + + L IRS+ +GG S +PQ+ Sbjct: 198 HQHLVKQTRIQGFTKPILLVLAPTRELSVQILEEAQKFGRPLGIRSVCCYGGASKHPQIA 257 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GV+ ++ATPGRL DL L +V+ LVLDEADRMLDMGF IR ++ +P + Sbjct: 258 ALQRGVECVIATPGRLNDLIEMRKADLSKVQYLVLDEADRMLDMGFEPQIRSIILNIPPE 317 Query: 181 -RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN--TASDQVTQHVHFVDKKRKRELLS 237 RQ LLFSAT+ +I+ALA L NP++I V N A+ + Q + + K + L Sbjct: 318 NRQTLLFSATWPKEIQALAHDFLKNPIQINVGEVNALVANKDIQQTIVMCSESEKLDKLE 377 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++ +++VF K N LA +L +DG ++HG++ Q RTR + FK G +R Sbjct: 378 QILRDLMHGKIIVFVAKKISCNDLANRLWEDGFAVDSLHGDRPQWERTRVMQAFKGGQLR 437 Query: 298 VLVATDIAARGLDIEELPHVVNYELP---NVPEDYVHRIGRTGRAAATGEALSLVCVDEH 354 VL+ATD+AARGLD++++ VVNY++P N EDYVHRIGRTGRA G+A + + Sbjct: 438 VLIATDVAARGLDVKDVGVVVNYDMPSGVNGVEDYVHRIGRTGRAGNKGKAYTFFTQGDR 497 Query: 355 KLLRDIEKLLKK---EIP 369 K + ++L K EIP Sbjct: 498 KNATQLVQVLTKAQQEIP 515 >UniRef50_Q54CE0 Probable ATP-dependent RNA helicase ddx17 n=2 Tax=Eukaryota RepID=DDX17_DICDI Length = 785 Score = 280 bits (716), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 151/374 (40%), Positives = 227/374 (60%), Gaps = 6/374 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F +++ + G+ PTPIQ QA P L+GRD++ A+TG+GKT F LP + Sbjct: 384 MQFTQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSI 443 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H I QP + L+L PTRELA QI E + I + V+GG S + Q+ Sbjct: 444 VH-INAQPVLREDDGPIVLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVA 502 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GV++++ATPGRL+D+ L +V LVLDEADRMLDMGF IR++++++ Sbjct: 503 ALKKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPD 562 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFV-DKKRKRELLSH 238 RQ L+FSAT+ +++ALA L + +++ + TA+ V Q V D ++K +LS Sbjct: 563 RQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEKKERMLSF 622 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 + G ++V+VF T+ G + L L G +S IHGNKSQ R L+ FK+G + + Sbjct: 623 LGSVGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPI 682 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 ++ATD+A+RGLDI+++ +VVNY+ PN E Y+HRIGRT RA A+G + SL+ D +L Sbjct: 683 MIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLLTTDNARLAN 742 Query: 359 DIEKLL---KKEIP 369 ++ K+L K++IP Sbjct: 743 ELIKVLTEAKQKIP 756 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P25888 ATP-dependent RNA helicase rhlE n=363 Tax=root R... 741 0.0 UniRef50_Q82T78 RhlE; ATP-dependent RNA helicase RhlE n=1 Tax=Ni... 627 e-178 UniRef50_C4ZJL9 DEAD/DEAH box helicase domain protein n=1 Tax=Th... 623 e-177 UniRef50_C8WWM6 DEAD/DEAH box helicase domain protein n=1 Tax=Al... 617 e-175 UniRef50_C7PD17 DEAD/DEAH box helicase domain protein n=139 Tax=... 614 e-174 UniRef50_C1D673 RhlE3 n=1 Tax=Laribacter hongkongensis HLHK9 Rep... 614 e-174 UniRef50_Q2SZW4 ATP-dependent RNA helicase RhlE n=104 Tax=Proteo... 613 e-174 UniRef50_Q0HYG8 DEAD/DEAH box helicase domain protein n=78 Tax=B... 612 e-174 UniRef50_Q126W4 DEAD/DEAH box helicase-like n=153 Tax=Bacteria R... 611 e-173 UniRef50_C4G990 Putative uncharacterized protein n=1 Tax=Shuttle... 609 e-173 UniRef50_C5CU85 DEAD/DEAH box helicase domain protein n=10 Tax=C... 607 e-172 UniRef50_Q0AFH3 DEAD/DEAH box helicase domain protein n=1 Tax=Ni... 605 e-172 UniRef50_C5LBR0 RNA helicase, putative n=4 Tax=Perkinsus marinus... 601 e-170 UniRef50_D2LSA7 DEAD/DEAH box helicase domain protein n=1 Tax=Ba... 600 e-170 UniRef50_C5TNR4 Dead/deah box helicase n=8 Tax=Neisseriaceae Rep... 598 e-169 UniRef50_B3RIS6 Putative uncharacterized protein n=1 Tax=Trichop... 596 e-169 UniRef50_D2QWU0 DEAD/DEAH box helicase domain protein n=1 Tax=Pi... 594 e-168 UniRef50_B0TII3 Dead/deah box helicase n=18 Tax=Bacteria RepID=B... 594 e-168 UniRef50_D2QGG1 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 594 e-168 UniRef50_D2RJY3 DEAD/DEAH box helicase domain protein n=2 Tax=Fi... 594 e-168 UniRef50_C6WW85 DEAD/DEAH box helicase domain protein n=1 Tax=Me... 593 e-168 UniRef50_A2SQE1 DEAD/DEAH box helicase domain protein n=17 Tax=c... 593 e-168 UniRef50_P24782 ATP-dependent RNA helicase dbp2 n=63 Tax=Eukaryo... 593 e-168 UniRef50_Q5L3G9 DEAD-box ATP-dependent RNA helicase cshA n=94 Ta... 592 e-168 UniRef50_C9RPH4 DEAD/DEAH box helicase domain protein n=1 Tax=Fi... 591 e-167 UniRef50_C4XQY7 ATP-dependent RNA helicase n=7 Tax=Deltaproteoba... 591 e-167 UniRef50_A0RP33 Putative ATP-dependent RNA helicase RhlE n=2 Tax... 591 e-167 UniRef50_B7VQT9 ATP-dependent RNA helicase n=15 Tax=Bacteria Rep... 591 e-167 UniRef50_Q81IT9 DEAD-box ATP-dependent RNA helicase cshA n=84 Ta... 590 e-167 UniRef50_P24783 ATP-dependent RNA helicase DBP2 n=131 Tax=Eukary... 589 e-167 UniRef50_A9KIB7 DEAD/DEAH box helicase domain protein n=1 Tax=Cl... 589 e-167 UniRef50_B8ILJ8 DEAD/DEAH box helicase domain protein n=10 Tax=A... 589 e-167 UniRef50_A9GRX1 DeaD2 protein n=5 Tax=Bacteria RepID=A9GRX1_SORC5 588 e-166 UniRef50_Q8MZI3 CG10077, isoform A n=15 Tax=Eukaryota RepID=Q8MZ... 587 e-166 UniRef50_B0SEU1 Superfamily II DNA and RNA helicase n=5 Tax=cell... 587 e-166 UniRef50_A6T3R2 ATP-dependent RNA helicase n=86 Tax=Bacteria Rep... 586 e-166 UniRef50_C6VX00 DEAD/DEAH box helicase domain protein n=1 Tax=Dy... 586 e-166 UniRef50_Q65N62 DEAD-box ATP-dependent RNA helicase cshA n=135 T... 586 e-166 UniRef50_A6M3F5 DEAD/DEAH box helicase domain protein n=5 Tax=Cl... 586 e-166 UniRef50_P17844 Probable ATP-dependent RNA helicase DDX5 n=52 Ta... 586 e-166 UniRef50_Q92841 Probable ATP-dependent RNA helicase DDX17 n=25 T... 586 e-166 UniRef50_A7IK90 DEAD/DEAH box helicase domain protein n=36 Tax=A... 585 e-165 UniRef50_Q5N7W4 DEAD-box ATP-dependent RNA helicase 30 n=3 Tax=O... 583 e-165 UniRef50_D2L498 DEAD/DEAH box helicase domain protein n=1 Tax=De... 583 e-165 UniRef50_C5RIK3 DEAD/DEAH box helicase domain protein n=3 Tax=Cl... 583 e-165 UniRef50_Q0ST49 ATP-dependent RNA helicase, DEAD/DEAH box family... 582 e-165 UniRef50_B4WCQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Br... 582 e-164 UniRef50_B4SPP3 DEAD/DEAH box helicase domain protein n=16 Tax=c... 581 e-164 UniRef50_Q0AVQ9 ATP-dependent RNA helicase n=1 Tax=Syntrophomona... 581 e-164 UniRef50_A8SKI7 Putative uncharacterized protein n=1 Tax=Parvimo... 581 e-164 UniRef50_C5EJJ1 DEAD/DEAH box helicase domain-containing protein... 581 e-164 UniRef50_D2MPZ3 Putative ATP-dependent RNA helicase RhlE n=1 Tax... 581 e-164 UniRef50_B6R5V0 ATP-dependent rna helicase, dead/deah box family... 581 e-164 UniRef50_A6VJ89 DEAD/DEAH box helicase domain protein n=5 Tax=Eu... 581 e-164 UniRef50_Q54CE0 Probable ATP-dependent RNA helicase ddx17 n=2 Ta... 580 e-164 UniRef50_D2QD85 DEAD/DEAH box helicase domain protein n=1 Tax=Sp... 580 e-164 UniRef50_B2V9H9 DEAD/DEAH box helicase domain protein n=4 Tax=Hy... 580 e-164 UniRef50_C6XMJ7 DEAD/DEAH box helicase domain protein n=23 Tax=B... 580 e-164 UniRef50_C1IBN1 DEAD-box ATP dependent DNA helicase n=1 Tax=Clos... 579 e-164 UniRef50_B1VFV5 ATP-dependent RNA helicase n=35 Tax=cellular org... 579 e-164 UniRef50_A9NFK0 ATP-dependent RNA helicase, superfamily II n=1 T... 578 e-163 UniRef50_A3FQ59 Putative uncharacterized protein n=1 Tax=Cryptos... 578 e-163 UniRef50_C5SI45 DEAD/DEAH box helicase domain protein n=1 Tax=As... 578 e-163 UniRef50_A9M0D7 ATP-dependent RNA helicase, putative n=21 Tax=Ne... 577 e-163 UniRef50_Q1ECV0 LOC556764 protein (Fragment) n=21 Tax=Eukaryota ... 577 e-163 UniRef50_A7K2L3 ATP-dependent RNA helicase n=17 Tax=Vibrionaceae... 577 e-163 UniRef50_B9Y818 Putative uncharacterized protein n=1 Tax=Holdema... 576 e-163 UniRef50_A2QC74 ATP-dependent RNA helicase dbp2 n=35 Tax=Eukaryo... 576 e-163 UniRef50_C4LJP9 ATP-dependent RNA helicase n=15 Tax=Bacteria Rep... 575 e-162 UniRef50_Q12QV2 DEAD/DEAH box helicase-like protein n=27 Tax=Gam... 575 e-162 UniRef50_Q3AZR1 DEAD/DEAH box helicase-like n=2 Tax=Synechococcu... 574 e-162 UniRef50_C8WFI7 DEAD/DEAH box helicase domain protein n=3 Tax=Zy... 574 e-162 UniRef50_A5UZK3 DEAD/DEAH box helicase domain protein n=8 Tax=Ba... 574 e-162 UniRef50_Q485D3 ATP-dependent RNA helicase, DEAD box family n=24... 574 e-162 UniRef50_B5EAF1 DEAD/DEAH box helicase domain protein n=3 Tax=De... 574 e-162 UniRef50_C5CGQ2 DEAD/DEAH box helicase domain protein n=1 Tax=Ko... 573 e-162 UniRef50_Q2BP56 Putative ATP-dependent RNA helicase n=1 Tax=Nept... 573 e-162 UniRef50_D2NRF7 Superfamily II DNA and RNA helicase n=3 Tax=Bact... 573 e-162 UniRef50_Q5CQW8 Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+H... 572 e-162 UniRef50_Q2NEZ7 Predicted helicase n=20 Tax=cellular organisms R... 572 e-162 UniRef50_C8P265 DEAD/DEAH family ATP-dependent RNA helicase n=1 ... 572 e-161 UniRef50_C7JBN9 DNA/RNA helicase n=19 Tax=cellular organisms Rep... 572 e-161 UniRef50_B3QTY3 DEAD/DEAH box helicase domain protein n=1 Tax=Ch... 572 e-161 UniRef50_Q2NB74 DNA and RNA helicase n=7 Tax=Alphaproteobacteria... 572 e-161 UniRef50_C7MN05 DNA/RNA helicase, superfamily II n=1 Tax=Cryptob... 571 e-161 UniRef50_C4Q0V4 DEAD box ATP-dependent RNA helicase, putative n=... 571 e-161 UniRef50_C8WL27 DEAD/DEAH box helicase domain protein n=3 Tax=Eg... 570 e-161 UniRef50_C6C1F3 DEAD/DEAH box helicase domain protein n=2 Tax=De... 569 e-161 UniRef50_B8FPB9 DEAD/DEAH box helicase domain protein n=12 Tax=B... 569 e-161 UniRef50_C6ATS7 DEAD/DEAH box helicase domain protein n=15 Tax=A... 569 e-160 UniRef50_P0A9P7 Cold-shock DEAD box protein A n=201 Tax=Bacteria... 568 e-160 UniRef50_Q04VV9 ATP-dependent RNA helicase (Superfamily II) n=4 ... 567 e-160 UniRef50_Q24I45 DEAD/DEAH box helicase family protein n=2 Tax=Te... 567 e-160 UniRef50_B6BTD3 Dead/deah box helicase domain protein n=1 Tax=be... 567 e-160 UniRef50_C0Q9A4 DeaD n=1 Tax=Desulfobacterium autotrophicum HRM2... 567 e-160 UniRef50_Q0BSI7 ATP-dependent RNA helicase n=54 Tax=Alphaproteob... 567 e-160 UniRef50_UPI00006CD03A P68-like protein, putative n=1 Tax=Tetrah... 566 e-160 UniRef50_C4Q2M5 DEAD box ATP-dependent RNA helicase, putative n=... 566 e-160 UniRef50_D1B4W7 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 565 e-159 UniRef50_B3L9V8 Helicase, putative n=6 Tax=Alveolata RepID=B3L9V... 565 e-159 UniRef50_Q2RQT0 DEAD/DEAH box helicase n=59 Tax=root RepID=Q2RQT... 565 e-159 UniRef50_O97032 DjVLGB (Fragment) n=1 Tax=Dugesia japonica RepID... 564 e-159 UniRef50_C4QFR3 DEAD box ATP-dependent RNA helicase, putative n=... 564 e-159 UniRef50_Q6AMK6 Probable ATP-dependent RNA helicase n=1 Tax=Desu... 564 e-159 UniRef50_B0TQ71 DEAD/DEAH box helicase domain protein n=31 Tax=G... 564 e-159 UniRef50_Q3SF48 DEAD/DEAH box helicase n=7 Tax=cellular organism... 564 e-159 UniRef50_Q5JKF2 DEAD-box ATP-dependent RNA helicase 40 n=11 Tax=... 564 e-159 UniRef50_D2LXV0 DEAD/DEAH box helicase domain protein n=1 Tax=Ba... 564 e-159 UniRef50_B8J1L5 DEAD/DEAH box helicase domain protein n=3 Tax=Ba... 564 e-159 UniRef50_Q9SQV1 DEAD-box ATP-dependent RNA helicase 40 n=14 Tax=... 564 e-159 UniRef50_O00571 ATP-dependent RNA helicase DDX3X n=262 Tax=cellu... 563 e-159 UniRef50_Q46G62 ATP-dependent RNA helicase n=7 Tax=cellular orga... 563 e-159 UniRef50_C7RHZ9 DEAD/DEAH box helicase domain protein n=3 Tax=An... 562 e-159 UniRef50_A7HKQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Fe... 562 e-159 UniRef50_A5G1U8 DEAD/DEAH box helicase domain protein n=7 Tax=Al... 562 e-159 UniRef50_Q11UP8 ATP-dependent RNA helicase (Cold-shock DEAD-box ... 562 e-158 UniRef50_P24346 Putative ATP-dependent RNA helicase an3 n=63 Tax... 562 e-158 UniRef50_D0MZ17 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phy... 562 e-158 UniRef50_UPI0000E87E35 putative ATP-dependent RNA helicase prote... 562 e-158 UniRef50_A0Z0M4 ATP-dependent RNA helicase n=1 Tax=marine gamma ... 561 e-158 UniRef50_Q17KA8 DEAD box ATP-dependent RNA helicase n=4 Tax=Euka... 561 e-158 UniRef50_C6Q9Z2 DEAD/DEAH box helicase domain protein n=1 Tax=Hy... 561 e-158 UniRef50_B2UL73 DEAD/DEAH box helicase domain protein n=1 Tax=Ak... 561 e-158 UniRef50_P19109 ATP-dependent RNA helicase p62 n=11 Tax=Eukaryot... 561 e-158 UniRef50_D1INE6 Whole genome shotgun sequence of line PN40024, s... 561 e-158 UniRef50_Q0G0P8 Superfamily II DNA and RNA helicase n=1 Tax=Fulv... 561 e-158 UniRef50_Q7UJ92 Putative ATP-dependent RNA helicase rhlE n=1 Tax... 561 e-158 UniRef50_C6E4K1 DEAD/DEAH box helicase domain protein n=9 Tax=Pr... 561 e-158 UniRef50_A8IAJ3 Helicase n=4 Tax=Alphaproteobacteria RepID=A8IAJ... 561 e-158 UniRef50_A8REA9 Putative uncharacterized protein n=1 Tax=Eubacte... 561 e-158 UniRef50_A5FST0 DEAD/DEAH box helicase domain protein n=5 Tax=De... 560 e-158 UniRef50_B3M5L4 GF23818 n=1 Tax=Drosophila ananassae RepID=B3M5L... 560 e-158 UniRef50_D1I3Q7 Whole genome shotgun sequence of line PN40024, s... 560 e-158 UniRef50_C7HXF4 DEAD/DEAH box helicase domain protein n=3 Tax=Ba... 559 e-158 UniRef50_Q4TVV3 Probable ATP-dependent RNA helicase DDX46 n=18 T... 559 e-158 UniRef50_Q7UG20 ATP-dependent RNA helicase n=2 Tax=Bacteria RepI... 559 e-158 UniRef50_D2QY81 DEAD/DEAH box helicase domain protein n=1 Tax=Pi... 559 e-158 UniRef50_Q5ZT20 ATP-dependent RNA helicase n=4 Tax=Legionella pn... 559 e-157 UniRef50_Q5NZY2 ATP-dependent RNA helicase DeaD n=12 Tax=Bacteri... 558 e-157 UniRef50_C6HUU6 Putative ATP-dependent helicase n=1 Tax=Leptospi... 558 e-157 UniRef50_Q4FSS4 Possible ATP-dependent DEAD/DEAH box RNA-helicas... 558 e-157 UniRef50_Q30SZ2 DEAD/DEAH box helicase-like protein n=2 Tax=Camp... 558 e-157 UniRef50_Q0D1K3 Pre-mRNA-processing ATP-dependent RNA helicase p... 557 e-157 UniRef50_C4V8Q7 Putative uncharacterized protein n=1 Tax=Nosema ... 557 e-157 UniRef50_Q17W71 ATP-dependent RNA helicase n=19 Tax=Helicobacter... 557 e-157 UniRef50_Q86XP3 ATP-dependent RNA helicase DDX42 n=64 Tax=Eukary... 557 e-157 UniRef50_Q1MY97 DEAD/DEAH box helicase-like protein n=1 Tax=Berm... 557 e-157 UniRef50_C7LND0 DEAD/DEAH box helicase domain protein n=1 Tax=De... 557 e-157 UniRef50_A3WBD4 DNA and RNA helicase n=1 Tax=Erythrobacter sp. N... 557 e-157 UniRef50_A2EVI2 DEAD/DEAH box helicase family protein n=1 Tax=Tr... 557 e-157 UniRef50_B7EQA6 cDNA clone:J023079L21, full insert sequence n=5 ... 557 e-157 UniRef50_Q1AG34 Ded1-like DEAD-box RNA helicase n=3 Tax=Coelomat... 557 e-157 UniRef50_C3RH47 ATP-dependent RNA helicase RhlE n=2 Tax=Bacteria... 557 e-157 UniRef50_C0W1P0 Superfamily II helicase n=2 Tax=Actinomyces RepI... 556 e-157 UniRef50_Q65XX1 Vasa-and belle-like helicase protein 1, isoform ... 556 e-157 UniRef50_Q15T34 DEAD/DEAH box helicase-like n=1 Tax=Pseudoaltero... 556 e-157 UniRef50_UPI00016C5336 ATP-dependent RNA helicase n=1 Tax=Gemmat... 556 e-157 UniRef50_Q0B215 DEAD/DEAH box helicase domain protein n=8 Tax=Pr... 556 e-157 UniRef50_A3EUK2 Putative ATP-dependent helicase n=2 Tax=Leptospi... 556 e-157 UniRef50_Q0W8H7 ATP-dependent RNA helicase n=1 Tax=uncultured me... 556 e-157 UniRef50_D1B384 DEAD/DEAH box helicase domain protein n=1 Tax=Su... 556 e-157 UniRef50_Q31AC4 DEAD/DEAH box helicase-like protein n=9 Tax=Proc... 556 e-157 UniRef50_B7P029 Vasa n=9 Tax=Coelomata RepID=B7P029_9BIVA 555 e-156 UniRef50_UPI0001C33831 DNA/RNA helicase, superfamily II n=3 Tax=... 554 e-156 UniRef50_C1AE59 ATP-dependent RNA helicase RhlE n=1 Tax=Gemmatim... 554 e-156 UniRef50_Q3IJ60 ATP-dependent RNA helicase, cold shock protein A... 554 e-156 UniRef50_A6TTG0 DEAD/DEAH box helicase domain protein n=28 Tax=F... 554 e-156 UniRef50_Q9M2F9 DEAD-box ATP-dependent RNA helicase 52 n=13 Tax=... 554 e-156 UniRef50_B6K0K2 ATP-dependent RNA helicase Prp11 n=1 Tax=Schizos... 554 e-156 UniRef50_A1B2U6 DEAD/DEAH box helicase domain protein n=23 Tax=R... 554 e-156 UniRef50_Q9VXW2 CG6227 n=20 Tax=Endopterygota RepID=Q9VXW2_DROME 554 e-156 UniRef50_Q0K893 ATP-dependent RNA helicase n=129 Tax=Proteobacte... 553 e-156 UniRef50_Q3AX69 DEAD/DEAH box helicase-like n=18 Tax=cellular or... 553 e-156 UniRef50_Q7NHM7 Gll2508 protein n=1 Tax=Gloeobacter violaceus Re... 552 e-156 UniRef50_A8WWC4 C. briggsae CBR-VBH-1 protein n=2 Tax=Caenorhabd... 552 e-156 UniRef50_Q8YXJ0 ATP-dependent RNA helicase n=24 Tax=Cyanobacteri... 552 e-156 UniRef50_Q725W5 ATP-dependent RNA helicase, DEAD/DEAH family n=3... 552 e-156 UniRef50_P44586 Cold-shock DEAD box protein A homolog n=29 Tax=P... 552 e-156 UniRef50_A8TFK3 DEAD/DEAH box helicase domain protein n=1 Tax=Me... 552 e-156 UniRef50_D2V713 ATP-dependent RNA helicase n=1 Tax=Naegleria gru... 552 e-155 UniRef50_B6IS62 DEAD/DEAH box helicase protein n=1 Tax=Rhodospir... 552 e-155 UniRef50_B0SU57 ATP-dependent RNA helicase, DEAD-box family (Dea... 552 e-155 UniRef50_B9SM44 Dead box ATP-dependent RNA helicase, putative n=... 552 e-155 UniRef50_B1ZWV2 DEAD/DEAH box helicase domain protein n=9 Tax=Ve... 551 e-155 UniRef50_C9RIQ5 DEAD/DEAH box helicase domain protein n=1 Tax=Fi... 551 e-155 UniRef50_C8PWG8 Cold-shock DEAD box protein A homolog n=1 Tax=En... 551 e-155 UniRef50_Q8SRB2 ATP-dependent RNA helicase DBP2 n=18 Tax=Fungi/M... 550 e-155 UniRef50_A6DIU5 Probable ATP dependent RNA helicase n=1 Tax=Lent... 550 e-155 UniRef50_B0SYC6 DEAD/DEAH box helicase domain protein n=33 Tax=A... 550 e-155 UniRef50_C0ZI64 Putative ATP-dependent RNA helicase n=1 Tax=Brev... 550 e-155 UniRef50_Q11039 Cold-shock DEAD box protein A homolog n=27 Tax=B... 550 e-155 UniRef50_Q8D2Y1 DeaD protein n=2 Tax=Enterobacteriaceae RepID=Q8... 550 e-155 UniRef50_A2U4F0 DEAD/DEAH box helicase n=4 Tax=Flavobacteriales ... 550 e-155 UniRef50_Q9VHP0 ATP-dependent RNA helicase bel n=13 Tax=Eukaryot... 549 e-155 UniRef50_C5PZD1 ATP-dependent RNA helicase n=5 Tax=Bacillales Re... 549 e-155 UniRef50_A9ENG9 ATP-independent RNA helicase n=18 Tax=Bacteria R... 549 e-154 UniRef50_B9SAJ6 Dead box ATP-dependent RNA helicase, putative n=... 549 e-154 UniRef50_A0KXT6 DEAD/DEAH box helicase domain protein n=61 Tax=G... 549 e-154 UniRef50_B4N414 GK13754 n=2 Tax=Bilateria RepID=B4N414_DROWI 548 e-154 UniRef50_Q3AFI3 ATP-dependent RNA helicase, DEAD box family n=1 ... 548 e-154 UniRef50_C4QME8 DEAD box ATP-dependent RNA helicase, putative n=... 548 e-154 UniRef50_C0EAN9 Putative uncharacterized protein n=1 Tax=Clostri... 548 e-154 UniRef50_P42305 ATP-dependent RNA helicase dbpA n=99 Tax=Firmicu... 548 e-154 UniRef50_Q30PP0 DEAD/DEAH box helicase-like protein n=11 Tax=Bac... 548 e-154 UniRef50_A6KZW9 ATP-dependent RNA helicase n=51 Tax=Bacteria Rep... 547 e-154 UniRef50_C5KR89 RNA helicase, putative n=3 Tax=Perkinsus marinus... 547 e-154 UniRef50_A9BJS7 DEAD/DEAH box helicase domain protein n=2 Tax=ce... 547 e-154 UniRef50_A9NFC3 DEAD box ATP-dependent RNA helicase n=1 Tax=Acho... 547 e-154 UniRef50_B8I5B1 DEAD/DEAH box helicase domain protein n=2 Tax=Cl... 547 e-154 UniRef50_B8A609 Novel protein similar to vertebrate DEAD (Asp-Gl... 547 e-154 UniRef50_Q9P7C7 Pre-mRNA-processing ATP-dependent RNA helicase p... 547 e-154 UniRef50_UPI00015B57D6 PREDICTED: similar to DEAD box ATP-depend... 546 e-154 UniRef50_B2S5R2 ATP-dependent RNA helicase, DEAD/DEAH box family... 546 e-154 UniRef50_B4MZE1 GK18312 n=1 Tax=Drosophila willistoni RepID=B4MZ... 546 e-154 UniRef50_C7N178 DNA/RNA helicase, superfamily II n=1 Tax=Slackia... 546 e-154 UniRef50_A4BET4 DEAD/DEAH box helicase-like protein n=1 Tax=Rein... 545 e-153 UniRef50_Q9GNP1 Vasa homolog n=25 Tax=Eumetazoa RepID=Q9GNP1_CIOSA 545 e-153 UniRef50_O97031 DjVLGA n=1 Tax=Dugesia japonica RepID=O97031_DUGJA 545 e-153 UniRef50_Q8H0U8 DEAD-box ATP-dependent RNA helicase 42 n=11 Tax=... 545 e-153 UniRef50_Q4PFD9 Pre-mRNA-processing ATP-dependent RNA helicase P... 545 e-153 UniRef50_C0YHR5 ATP-dependent RNA helicase n=1 Tax=Chryseobacter... 545 e-153 UniRef50_B9SW84 Dead box ATP-dependent RNA helicase, putative n=... 545 e-153 UniRef50_B6YWR7 DEAD/DEAH box RNA helicase n=3 Tax=Thermococcus ... 545 e-153 UniRef50_D1H3Q8 Whole genome shotgun sequence of line PN40024, s... 545 e-153 UniRef50_A6RW79 Pre-mRNA-processing ATP-dependent RNA helicase p... 545 e-153 UniRef50_B7QFN5 ATP-dependent RNA helicase, putative n=1 Tax=Ixo... 544 e-153 UniRef50_C8PPF9 ATP-dependent RNA helicase DbpA n=1 Tax=Treponem... 544 e-153 UniRef50_UPI0001C311D7 DEAD/DEAH box helicase domain protein n=1... 544 e-153 UniRef50_C7PCT4 DEAD/DEAH box helicase domain protein n=20 Tax=B... 544 e-153 UniRef50_UPI00019259AA PREDICTED: similar to DEAD (Asp-Glu-Ala-A... 544 e-153 UniRef50_B9ETM9 Putative uncharacterized protein n=2 Tax=Oryza s... 544 e-153 UniRef50_C4R557 RNA helicase in the DEAD-box family, necessary f... 544 e-153 UniRef50_A3ZWP8 ATP-dependent RNA helicase n=1 Tax=Blastopirellu... 544 e-153 UniRef50_C9DQK7 VASA DEAD-box protein n=5 Tax=Chordata RepID=C9D... 543 e-153 UniRef50_O26305 ATP-dependent RNA helicase, eIF-4A family n=1 Ta... 543 e-153 UniRef50_Q28T45 DEAD/DEAH box helicase-like protein n=18 Tax=Alp... 543 e-153 UniRef50_Q26696 Putative DEAD-box RNA helicase HEL64 n=7 Tax=Try... 543 e-153 UniRef50_B1V958 DEAD/DEAH box helicase-like n=4 Tax=Candidatus P... 542 e-153 UniRef50_Q7K4L8 LD33749p n=15 Tax=Bilateria RepID=Q7K4L8_DROME 542 e-153 UniRef50_A8P4I3 ATP-dependent RNA helicase An3, putative n=2 Tax... 542 e-152 UniRef50_C4LZM8 DEAD/DEAH box helicase, putative n=4 Tax=Entamoe... 542 e-152 UniRef50_Q5HME0 Probable DEAD-box ATP-dependent RNA helicase SER... 542 e-152 UniRef50_C5S7U5 DEAD/DEAH box helicase domain protein n=1 Tax=Al... 542 e-152 UniRef50_Q2PZC2 Vasa protein n=16 Tax=Neoptera RepID=Q2PZC2_APIME 542 e-152 UniRef50_C0AEG7 DEAD/DEAH box helicase domain protein (Fragment)... 541 e-152 UniRef50_A4EAF2 Putative uncharacterized protein n=4 Tax=Collins... 541 e-152 UniRef50_Q553B1 ATP-dependent RNA helicase ddx46 n=1 Tax=Dictyos... 541 e-152 UniRef50_C1D891 Putative ATP-dependent RNA helicase protein n=1 ... 541 e-152 UniRef50_Q9NXZ2 Probable ATP-dependent RNA helicase DDX43 n=23 T... 540 e-152 Sequences not found previously or not previously below threshold: UniRef50_B7PA03 ATP-dependent helicase (DEAD box), putative n=1 ... 562 e-158 >UniRef50_P25888 ATP-dependent RNA helicase rhlE n=363 Tax=root RepID=RHLE_ECOLI Length = 454 Score = 741 bits (1915), Expect = 0.0, Method: Composition-based stats. Identities = 454/454 (100%), Positives = 454/454 (100%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL Sbjct: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM Sbjct: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK Sbjct: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI Sbjct: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV Sbjct: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI Sbjct: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA Sbjct: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 Query: 421 SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ Sbjct: 421 SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 >UniRef50_Q82T78 RhlE; ATP-dependent RNA helicase RhlE n=1 Tax=Nitrosomonas europaea RepID=Q82T78_NITEU Length = 498 Score = 627 bits (1618), Expect = e-178, Method: Composition-based stats. Identities = 230/449 (51%), Positives = 309/449 (68%), Gaps = 10/449 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F LGLS +IL AV ++GY PTPIQ Q IP++L G+D+MASAQTGTGKTAGFTLPLL Sbjct: 5 VTFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLL 64 Query: 61 QHL--ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 L + R PVRALI+ PTRELA QI E+VR Y KYL +R+ VVFGG++I PQ Sbjct: 65 YRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQ 124 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 + L+ GV++LVATPGRLLDL Q AV + EILVLDEADRMLDMGF+ DI+RV+ L Sbjct: 125 IAALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMALLS 184 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 +RQ+L+FSATFS +I+ LA+ LL P+ IE A +NT ++ ++ +H+V K LL H Sbjct: 185 PQRQSLMFSATFSGEIRKLADSLLKQPVRIEAAVQNTVNESISHVIHWVKPDSKFALLLH 244 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 +I + N +Q L+F +TKHGA+HLA+ L++ I + AIHG+++Q RT+ALA+FK GD+++ Sbjct: 245 LIRQQNLKQALIFVKTKHGASHLAQMLSRHEISAVAIHGDRNQQQRTQALAEFKHGDVQI 304 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARG+DIE+L HV+NYELP PEDYVHRIGRTGRA + G+A+SLV E +LL Sbjct: 305 LVATDVAARGIDIEKLSHVINYELPGNPEDYVHRIGRTGRAGSKGKAISLVSEHEKELLA 364 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAK 418 +IEKLL ++ I G++ + ++ P R+ R G + G + + G K Sbjct: 365 NIEKLLNAKLETEQIAGFDAEQFARSLP---DRKNRMSAGNSRYGNKPME-----NGSEK 416 Query: 419 SASAKPAEKPSRRLGDAKPAGEQQRRRRP 447 S S K + PS + G Q+ P Sbjct: 417 SRSEKHRKLPSSQKYSGSRRGGTQKYSDP 445 >UniRef50_C4ZJL9 DEAD/DEAH box helicase domain protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZJL9_THASP Length = 545 Score = 623 bits (1607), Expect = e-177, Method: Composition-based stats. Identities = 232/462 (50%), Positives = 300/462 (64%), Gaps = 11/462 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF LGL P++L+AV + GY EPTPIQ+QAIP V+ G+D+M AQTGTGKTAGFTLPLL Sbjct: 1 MSFADLGLIPELLQAVTDAGYTEPTPIQRQAIPIVIAGKDVMGGAQTGTGKTAGFTLPLL 60 Query: 61 QHLI--TRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 + + R RALIL PTRELA Q+ E+V+ YSK+L +RS+ V+GGV I PQ Sbjct: 61 HRIARHANTSTSPARHQTRALILAPTRELAMQVFESVKTYSKHLPLRSVCVYGGVDIRPQ 120 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 +LR G+++++ATPGRLLD Q ++ L QVE+LVLDEADRMLDMGFI DI+R+L LP Sbjct: 121 QAELRRGIEIVIATPGRLLDHLEQKSINLSQVEVLVLDEADRMLDMGFIPDIKRILALLP 180 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 +RQ+LLFSATFSD+IK LA+++L P IEVARRN S+ +T VH V KR LL+H Sbjct: 181 KQRQSLLFSATFSDEIKRLADQMLKEPQLIEVARRNMVSETITHVVHPVSSGMKRNLLAH 240 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ Q LVF TK LA L + GI + AIHG+K Q RT L FKSG +RV Sbjct: 241 LLRHKPDTQALVFVDTKLMCGRLAHYLERSGISADAIHGDKGQQQRTDTLEAFKSGKLRV 300 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLDI+ELP V+N+ELP+ EDYVHRIGRTGRA G A+SLV +E L Sbjct: 301 LVATDVAARGLDIDELPFVINFELPHTAEDYVHRIGRTGRAGHHGYAISLVSSEEKHWLS 360 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGR---------GQGGGRGQQQ 409 +IEKL+K +IP+ +PG++PDP + R +R + GGR + Sbjct: 361 EIEKLIKLQIPQERVPGFDPDPDFHEAGSRGHRGRRPAAAAADTEAQAPAARSGGRERGV 420 Query: 410 PRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPA 451 R E + A + + R G + A + +P +P Sbjct: 421 ERSAEARREPAREREGLRAGPRRGRSSVAADGFDFSKPYEPL 462 >UniRef50_C8WWM6 DEAD/DEAH box helicase domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WWM6_ALIAD Length = 541 Score = 617 bits (1592), Expect = e-175, Method: Composition-based stats. Identities = 167/389 (42%), Positives = 249/389 (64%), Gaps = 7/389 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF+S GL+ +L+A+ + G+ EP+PIQ IP VLEGRD++ AQTGTGKTA F +PL++ Sbjct: 18 SFESFGLNRRVLQAIHDMGFEEPSPIQAACIPVVLEGRDVIGQAQTGTGKTAAFGIPLVE 77 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + T V+A++LTPTRELA Q+ +R +KY +RS+ ++GG SI Q+ Sbjct: 78 RVSTEPR-------VQAIVLTPTRELAIQVAGEIRKIAKYKRVRSVPIYGGQSIVHQIRA 130 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV +++ TPGR+LD H+ + L V ++VLDEAD MLDMGFI DI +L + P+ R Sbjct: 131 LKQGVQIVIGTPGRVLDHIHRGTLSLSDVRMVVLDEADEMLDMGFIDDIEAILRETPSDR 190 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q +LFSATF +++K LA + + +P I V R Q+ Q + V ++ K + L ++ Sbjct: 191 QTMLFSATFPNEVKRLALRYMRDPQHITVNRGEVTVPQIDQVCYKVLERNKLDSLCRIVD 250 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + Q ++F RTK G + L E L G + +HG+ SQ R R + F+ +I +LVA Sbjct: 251 SEDIQLGIIFCRTKRGVDDLVEALLARGYLADGLHGDLSQAQRDRVMRKFRKNEIELLVA 310 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD++++ HV+NY++P PE YVHRIGRTGRA G A++LV E+KLL+ IE Sbjct: 311 TDVAARGLDVDDVTHVINYDVPQDPESYVHRIGRTGRAGKRGLAITLVTPREYKLLKQIE 370 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 + +K++I +P E +AE ++ Sbjct: 371 REIKQKITVREVPSLEDVAERQAEMWRSK 399 >UniRef50_C7PD17 DEAD/DEAH box helicase domain protein n=139 Tax=root RepID=C7PD17_CHIPD Length = 492 Score = 614 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 238/465 (51%), Positives = 311/465 (66%), Gaps = 21/465 (4%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF+ LGL +L+A+ +GY PTPIQQQAIP VL+ RDL+ AQTGTGKTA F +PLL Sbjct: 27 LSFEQLGLIEPLLKALDNEGYTAPTPIQQQAIPHVLDTRDLLGCAQTGTGKTAAFAIPLL 86 Query: 61 Q--HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 Q H + KG R ++ALILTPTRELA QI E+ Y K+L+++SLV+FGGVS +PQ Sbjct: 87 QLMHQDQQAQQRKGLRNIKALILTPTRELAIQIQESFTAYGKFLDLKSLVIFGGVSQHPQ 146 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ GVD+L+ATPGRLLDL QN + L ++ VLDEADRMLDMGF+HD++RV+ KLP Sbjct: 147 TEALKKGVDILIATPGRLLDLISQNYITLRDIKYFVLDEADRMLDMGFVHDVQRVIVKLP 206 Query: 179 AKRQNLLFSATFSDDIKALAEKLL-HNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 +RQ+L FSAT +I+ LA+ +L +NP ++EV ++ ++ +TQ ++FV+K KR LL Sbjct: 207 EQRQSLFFSATMPPEIQTLAKAILRNNPAKVEVTPVSSTAETITQSMYFVNKNDKRNLLL 266 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 H++ + +LVFTRTKHGA+ + + L+K I + AIHGNKSQ AR RAL +FKS R Sbjct: 267 HILKDKAIKTLLVFTRTKHGADRVVKDLHKAEITAEAIHGNKSQNARQRALNNFKSQQTR 326 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 VLVATDIAARG+DI+EL HVVNYELPNVPE YVHRIGRTGRA A G A+S +E L Sbjct: 327 VLVATDIAARGIDIDELTHVVNYELPNVPETYVHRIGRTGRAGADGIAISFCEPEEKAFL 386 Query: 358 RDIEKLLKKEIPR-----------IAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRG 406 +DI KL+ +EIP +A+P +P P K + Q+ R ++GG R + G Sbjct: 387 KDILKLISREIPVETEHPFHNGDSMALPAPKPAPQQKPKQ-QHPRDKKGGFSRNRQGVVQ 445 Query: 407 QQQPRRGEGGAKSASAKPAEKPSRRLGDAKPA---GEQQRRRRPR 448 + R G G K S KP R KP G RR RP+ Sbjct: 446 SRDARPGAGAGKPNSGKPN---GGRPQGGKPKDGNGNSARRERPQ 487 >UniRef50_C1D673 RhlE3 n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D673_LARHH Length = 582 Score = 614 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 273/457 (59%), Positives = 326/457 (71%), Gaps = 4/457 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF L L +LRA+ E GY EPTPIQ++AI VL GRDLMA+AQTGTGKTAGF LPLL Sbjct: 4 ISFADLQLVDPLLRAITEAGYTEPTPIQREAIAPVLAGRDLMAAAQTGTGKTAGFALPLL 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L PH R L+LTPTRELAAQ+GE++ +L + SLV+FGGV + PQ+ Sbjct: 64 QRLAATHPHPHPAGRPRGLVLTPTRELAAQVGESIATLGTHLPLTSLVIFGGVRVKPQIE 123 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L VD+L+ATPGRL+DL Q AV L VEILVLDEADRMLDMGFI D+R+VL LPA+ Sbjct: 124 ALTQRVDILIATPGRLIDLAKQEAVDLSGVEILVLDEADRMLDMGFIRDVRKVLKLLPAE 183 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSATF+DDIKALA+ LH+P +EV+ N+ ++ VT HVH VD+ RKRELL+H++ Sbjct: 184 RQNLLFSATFNDDIKALADTFLHDPQLVEVSPPNSTTELVTHHVHLVDRNRKRELLTHLV 243 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 WQQVLVFTRTKHGAN LAE L K GI +AAIHGNKSQGARTRAL++FK G +RVLV Sbjct: 244 ESRQWQQVLVFTRTKHGANRLAEVLAKGGIPAAAIHGNKSQGARTRALSEFKDGSLRVLV 303 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+DI ELP VVNYELPNVPEDYVHRIGRTGRA + GEA+SLVCVDE KLL DI Sbjct: 304 ATDIAARGIDISELPQVVNYELPNVPEDYVHRIGRTGRAGSPGEAVSLVCVDELKLLADI 363 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRG---GGGRGQGGGRGQQQPRRGEGGA 417 E + + IP+ PG+E D S+ +P+ R Q+G G G G R +++P Sbjct: 364 EAFIGRPIPQFTEPGFEADLSVPPQPLLPPRHQQGRQDGEGGEPRGQRNKKKPHNKPARR 423 Query: 418 KSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 A P + P G P E Q R+ RKPA Q Sbjct: 424 ADAPTLPMDAPEHDSGAPAPVAEAQPPRQ-RKPAPGQ 459 >UniRef50_Q2SZW4 ATP-dependent RNA helicase RhlE n=104 Tax=Proteobacteria RepID=Q2SZW4_BURTA Length = 571 Score = 613 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 233/458 (50%), Positives = 300/458 (65%), Gaps = 7/458 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD GL+ +ILRA+AEQGY PTPIQ AIP VL GRD+M +AQTGTGKTA F+LP++Q Sbjct: 102 TFDQFGLAAEILRAIAEQGYTTPTPIQANAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 161 Query: 62 HLITRQ--PHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 L+ + + R PVRALILTPTRELA Q+ NV Y+K+ +RS VVFGGV +NPQM Sbjct: 162 RLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQM 221 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 +LR GV++L+ATPGRLLD Q L QV+ILVLDEADRMLDMGF+ D++R+L LP Sbjct: 222 AELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLPK 281 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ LLFSATFS +IK LA L NP IEVAR N A+ VTQ V+ V + K+ + + Sbjct: 282 ERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVVKL 341 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I + +QV+VF +K GA+ LA Q+ +DGI +AAIHG++SQ R +AL FK G+I L Sbjct: 342 IRDRSLKQVIVFCNSKIGASRLARQIERDGIVAAAIHGDRSQSERMQALDAFKRGEIEAL 401 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLDI ELP V+N++LP EDYVHRIGRTGRA A+G+ALSL +E K L D Sbjct: 402 VATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQLAD 461 Query: 360 IEKLLKKEIP----RIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG 415 IEKL+K+ + + +P + D + ++ GR GG PRR E Sbjct: 462 IEKLIKRTLSLETLELDLPRHRHDERGGRRERERDERRGASAGRRSAGGERAHHPRR-EA 520 Query: 416 GAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAA 453 KP S + Q ++ P++P AA Sbjct: 521 PIDDFFLKPYVPSSSANQPEEAKPAQPEKKAPKQPLAA 558 >UniRef50_Q0HYG8 DEAD/DEAH box helicase domain protein n=78 Tax=Bacteria RepID=Q0HYG8_SHESR Length = 549 Score = 612 bits (1579), Expect = e-174, Method: Composition-based stats. Identities = 266/467 (56%), Positives = 335/467 (71%), Gaps = 18/467 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF SLGLS I +AV EQGY P+PIQ QAIPAVL G+D+MA+AQTGTGKTAGFTLPLL Sbjct: 1 MSFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L G+ +RAL+LTPTRELAAQ+ E+V Y KYL +RS VVFGGV INPQ+ Sbjct: 61 ELLSKGNKAKAGQ--IRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQ 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KLR GVDVLVATPGRLLDL QN VK +Q+EILVLDEADRMLDMGFI DI+++L LPAK Sbjct: 119 KLRHGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAK 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNL+FSATFSD+I+ LA+ L++ P+EI V RN A++ V Q + VDK +K LL +I Sbjct: 179 RQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSALLIQLI 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +WQQVLVF+RTKHGAN LA+ L + I +AAIHGNKSQGART+ALADFKSG++RVLV Sbjct: 239 KQEDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLV 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARGLDI++LP VVN++LPNVPEDYVHRIGRTGRA A+G+A+SLV +E KLLRDI Sbjct: 299 ATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSSEEFKLLRDI 358 Query: 361 EKLLKKEIPRIAIPGYEPDPSI------------KAEPIQNGRQQRGGGG---RGQGGGR 405 E+L+ + + R I G+ P ++ K + + + R+ R G R G Sbjct: 359 ERLINRVLERQEIEGFGPAHALPESTLIAHGKDNKVKAVASQRKHRSAGKPTPRTGTGRD 418 Query: 406 GQQQPRRGEGGAKSASAKPAEKPSRRLGD-AKPAGEQQRRRRPRKPA 451 G++ P +G A+ ++ P + G +P + + + Sbjct: 419 GRKTPDSIDGSAQQKNSNPNQGQRNNQGQHKRPQSSKNAEHKNTHSS 465 >UniRef50_Q126W4 DEAD/DEAH box helicase-like n=153 Tax=Bacteria RepID=Q126W4_POLSJ Length = 579 Score = 611 bits (1576), Expect = e-173, Method: Composition-based stats. Identities = 247/399 (61%), Positives = 308/399 (77%), Gaps = 2/399 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F+ L L+P IL+AV EQGY PTPIQ QAIPAVL G DL+ AQTGTGKTA FTLP+L Sbjct: 1 MTFEELKLAPAILKAVLEQGYDTPTPIQAQAIPAVLAGSDLLGGAQTGTGKTAAFTLPML 60 Query: 61 QHLITRQ--PHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 Q L T + +G VRALI+TPTRELAAQ+ E+VR Y KYL++ S+V+FGGV + Q Sbjct: 61 QRLSTEPRLTNRRGVNAVRALIMTPTRELAAQVEESVRTYGKYLDLTSMVMFGGVGMGAQ 120 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 + KLR GVD+LVATPGRLLD Q + L QV+ILVLDEADRMLDMGFIHDI++VL +P Sbjct: 121 IDKLRRGVDILVATPGRLLDHAGQGTLDLSQVQILVLDEADRMLDMGFIHDIKKVLALVP 180 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 +Q+LLFSATFSD+I+ LA LL +PL I+V RNT ++TQ +H V + +K+ LL+H Sbjct: 181 KHKQSLLFSATFSDEIRELANGLLRDPLHIQVTPRNTTVQRITQTIHPVGRSKKKALLTH 240 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 +I + NW QVLVFTRTK GAN++AE L K+GI + A+HGNKSQ ART+AL FK G IR Sbjct: 241 IINEHNWSQVLVFTRTKFGANNVAEHLTKNGIEAMALHGNKSQTARTQALQGFKDGTIRA 300 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATDIAARG+DI+ELPHVVNYE+PNV EDYVHRIGRTGRA +GEA+SLVC+DE ++ Sbjct: 301 LVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGNSGEAVSLVCLDEEGFMQ 360 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGG 397 DIE+ K+ I ++ +PG+E +P +AEP+ GRQ GG Sbjct: 361 DIERFTKQNIEKVLVPGFEAEPGERAEPLAMGRQTIWGG 399 >UniRef50_C4G990 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G990_9FIRM Length = 538 Score = 609 bits (1573), Expect = e-173, Method: Composition-based stats. Identities = 201/450 (44%), Positives = 283/450 (62%), Gaps = 10/450 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F GL D+L A+ + GY EPTP+Q+++IP +LEGRD++ AQTGTGKTA F LP+L Sbjct: 62 LKFSEFGLKKDLLSAIRKAGYEEPTPVQEESIPVILEGRDMIGCAQTGTGKTAAFALPVL 121 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + R VRAL+LTPTRELA QI +N + Y +YL++R++ ++GG PQ+ Sbjct: 122 HKLTLLK-----RPRVRALVLTPTRELAIQIFDNFKKYGRYLHLRTVCLYGGAKRGPQIG 176 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR G D+LVATPGRLLD Q+ V L VEILVLDEADRMLDMGF+ D+ R++ P+K Sbjct: 177 ALRRGADILVATPGRLLDFMGQDLVDLSSVEILVLDEADRMLDMGFLPDVSRIVESTPSK 236 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ L+FSAT +++ LA+++L +P++++V N A+D V Q + F ++ KRE+++ ++ Sbjct: 237 RQTLMFSATMEKEVRQLADRMLKDPVQVQVTPENEAADTVEQKLIFSSREDKREIIASLL 296 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +VFTRTKHGA+ L+ +L + GI S AIHG+K+QG R AL FKSG +RV+V Sbjct: 297 TDEAVESAIVFTRTKHGADKLSRELKRRGIESVAIHGDKTQGQRQDALNRFKSGKVRVMV 356 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI +L HV NY++P Y+HRIGRTGRA +G A++L C E LR++ Sbjct: 357 ATDVAARGLDIPKLSHVFNYDVPEEAGAYIHRIGRTGRAGESGIAITLCCEAELDALREV 416 Query: 361 EKLLKKEIPRIA----IPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 E+LL+K IP + +P K ++GR GG+ G G + R G Sbjct: 417 EELLEKPIPELQTQWSLPLERKARKGKGGRTRHGRSGYRSGGQKNAGKSGHKTGSRNRQG 476 Query: 417 AKSASAK-PAEKPSRRLGDAKPAGEQQRRR 445 K S R + G + Sbjct: 477 HADRRQKAGGASGSGRGRRRRDQGPRPMPN 506 >UniRef50_C5CU85 DEAD/DEAH box helicase domain protein n=10 Tax=Comamonadaceae RepID=C5CU85_VARPS Length = 601 Score = 607 bits (1567), Expect = e-172, Method: Composition-based stats. Identities = 246/405 (60%), Positives = 307/405 (75%), Gaps = 3/405 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+FD L L+P IL+AV E GY PTPIQ QAIPAVLEG DL+ AQTGTGKTA FTLP+L Sbjct: 1 MNFDELKLAPAILKAVHEHGYDTPTPIQAQAIPAVLEGHDLLGGAQTGTGKTAAFTLPML 60 Query: 61 QHLITRQPHAK--GRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 L T G +RAL+LTPTRELAAQ+ E+VR Y KYL + S V+FGGV +NPQ Sbjct: 61 HKLSTGASATNKFGGIGIRALVLTPTRELAAQVEESVRTYGKYLELDSTVIFGGVGMNPQ 120 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 + KL+ GVD+LVATPGRLLDL+ Q + L QV++L+LDEADRMLDMGFIHD++++L +P Sbjct: 121 ISKLKKGVDILVATPGRLLDLQQQGMLDLSQVQMLILDEADRMLDMGFIHDVKKILALVP 180 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 ++Q+LLFSATFSD+I+ LA LL NP I+V RNT ++TQ +H V + +K+ LL+H Sbjct: 181 KEKQSLLFSATFSDEIRDLAATLLKNPQSIQVTPRNTTVQRITQVIHPVGRGKKKALLAH 240 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 +I + W QVLVFTRTK GAN +AE L K+GI + A+HGNKSQ ART+ALA FKSGDIR Sbjct: 241 IINENKWSQVLVFTRTKFGANSVAEFLTKNGIEAMALHGNKSQSARTQALAGFKSGDIRA 300 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATDIAARG+DI+ELPHVVNYE+PNV EDYVHRIGRTGRA ++GEA+S VC+DE ++ Sbjct: 301 LVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGSSGEAVSFVCMDEEGFMQ 360 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQ-RGGGGRGQG 402 +IE+ K+ IP + G+ P+ +AEPI GRQ GG GR Sbjct: 361 EIERFTKQTIPVQFVEGFGPEEGERAEPIAMGRQTIWGGAGRPPS 405 >UniRef50_Q0AFH3 DEAD/DEAH box helicase domain protein n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AFH3_NITEC Length = 488 Score = 605 bits (1562), Expect = e-172, Method: Composition-based stats. Identities = 225/431 (52%), Positives = 304/431 (70%), Gaps = 4/431 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+ L LS +ILRAV ++GY PTPIQ Q IP +L G+D+MASAQTGTGKTAGFTLPLL Sbjct: 5 VTFEQLDLSSEILRAVIDEGYINPTPIQAQVIPPILAGKDVMASAQTGTGKTAGFTLPLL 64 Query: 61 QHLITRQPHA--KGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 HL + R PVRALI+ PTRELA QI E+VR Y KYL +R+ VVFGGV+I PQ Sbjct: 65 HHLQAHASSSTSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTTVVFGGVNIEPQ 124 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 + +LR GV++LVATPGRLLDL AV + EILVLDEADRMLDMGF+ DI++V+ LP Sbjct: 125 ITELRNGVEILVATPGRLLDLVEHKAVNFSKTEILVLDEADRMLDMGFLPDIKKVMALLP 184 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 ++RQ+L+FSATFSD+I+ LA+ LL +P+ IEVA +NT ++ ++ VH + + K LL H Sbjct: 185 SQRQSLMFSATFSDEIRKLADGLLKHPVRIEVAAQNTINESISHVVHRIKPESKFALLLH 244 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + + +Q LVF +TKHGA+ LA+ L+ I + AIHG+K+Q RT+AL++FK GD+++ Sbjct: 245 LVKQQDLKQALVFVKTKHGASQLAQMLSHHKILALAIHGDKNQQQRTQALSEFKHGDVQI 304 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARG+DIE+L HVVNYELP PEDYVHRIGRTGRA + G+A+SLV E +LL Sbjct: 305 LVATDVAARGIDIEKLSHVVNYELPGNPEDYVHRIGRTGRAGSKGKAISLVSEHETELLT 364 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGR--GQQQPRRGEGG 416 IEKLL ++ I G++ + +++ P + R R ++ R+ G Sbjct: 365 SIEKLLNTKLEIEQIAGFDAELFVRSLPDRKNRVSADIARRSNKQAEVANGEKTRKYSGS 424 Query: 417 AKSASAKPAEK 427 +SA + Sbjct: 425 RRSALQNHKDP 435 >UniRef50_C5LBR0 RNA helicase, putative n=4 Tax=Perkinsus marinus ATCC 50983 RepID=C5LBR0_9ALVE Length = 674 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 154/416 (37%), Positives = 235/416 (56%), Gaps = 18/416 (4%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD L IL+ + G+ +PTPIQ Q P L GRD++ A+TG+GKT F +P + Sbjct: 213 TFDEACLPDYILKEINRAGFEKPTPIQVQGWPVALSGRDMVGIAETGSGKTLAFMIPAVI 272 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + KG P+ LIL PTRELA QI + + I + V+GG PQ Sbjct: 273 HINAQPYLQKGDGPI-VLILAPTRELALQIKAECDRFGRSSRITNTCVYGGTQRGPQARA 331 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV++ +ATPGRL+D L +V LV+DEADRMLDMGF +R++++++ R Sbjct: 332 LQNGVEICIATPGRLIDFLESGTTNLKRVTYLVMDEADRMLDMGFEPQVRKIVSQIRPDR 391 Query: 182 QNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q L++SAT+ +++ LA + + P+ + V R A + Q+V V+ K E L ++ Sbjct: 392 QTLMWSATWPKEVQHLARDICNEEPVLVTVGRSGHACHNIQQYVEVVENNVKPERLLALM 451 Query: 241 GKGN-------WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKS 293 + + L+F TK GA+ + L +DG + +IHG+K Q R L FK+ Sbjct: 452 QAASAATGGGWTAKTLIFCDTKRGADDITRLLRRDGWPALSIHGDKKQSERDWVLNQFKT 511 Query: 294 GDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDE 353 G +++ATD+A+RGLD++++ +V+NY+ P EDYVHRIGRTGRA A+G A S D+ Sbjct: 512 GRSAIMIATDVASRGLDVKDVKYVINYDFPGTIEDYVHRIGRTGRAGASGVAYSFFSPDK 571 Query: 354 HKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQG--GGRGQ 407 KL R + L++ + +++ N R GG GRG+G GG+G+ Sbjct: 572 GKLARQLVNCLREANQSVP-------EALETIAFANDRSNSGGKGRGKGNYGGKGR 620 >UniRef50_D2LSA7 DEAD/DEAH box helicase domain protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSA7_BACS4 Length = 528 Score = 600 bits (1548), Expect = e-170, Method: Composition-based stats. Identities = 156/378 (41%), Positives = 228/378 (60%), Gaps = 7/378 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+ +S DI +A+ + G+ P+PIQ++ IP +L+G D++ AQTGTGKTA F +PLL Sbjct: 2 MKFEDFQISNDIKKAIKDMGFEAPSPIQEKVIPEILKGHDVIGQAQTGTGKTAAFGIPLL 61 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + R V++LILTPTRELA Q+ ++ SK+ + L ++GG SI Q+ Sbjct: 62 EKV-------TSDRQVQSLILTPTRELAIQVAGELQKLSKFKRSQILPIYGGQSIGHQIK 114 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GV V+V TPGR+LD ++ ++L V L+LDEAD MLDMGFI DI ++L ++ Sbjct: 115 ALKRGVQVVVGTPGRVLDHLNRKTLQLRSVHTLILDEADEMLDMGFIEDIEKILQQVNTN 174 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT I+ L+ K ++NP ++ +++ + + Q V +K K + L +I Sbjct: 175 RQTMLFSATMPPPIRKLSNKYMNNPKQVTISKGEVTAPSINQVYFKVLEKNKLDSLCRVI 234 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++F RTK G L E L G + +HG+ +Q R + F+ I L+ Sbjct: 235 DSETIDLGIIFCRTKKGVAELTEALQARGYMADGLHGDLTQSQRDIVMKKFRDSSIEFLI 294 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+D+E + HV+NY++P PE YVHRIGRTGRA G A++LV E K LR I Sbjct: 295 ATDVAARGIDVENVSHVINYDIPQDPESYVHRIGRTGRAGREGVAVTLVTPREMKHLRSI 354 Query: 361 EKLLKKEIPRIAIPGYEP 378 E +K IP IP E Sbjct: 355 EAEIKMTIPSQRIPSVEE 372 >UniRef50_C5TNR4 Dead/deah box helicase n=8 Tax=Neisseriaceae RepID=C5TNR4_NEIFL Length = 487 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 212/459 (46%), Positives = 280/459 (61%), Gaps = 17/459 (3%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F SLGL +++ A+ +QGY PTPIQ AIP L G DL+A+AQTGTGKTA F LP L+ Sbjct: 28 FSSLGLGSELVSALTDQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLEL 87 Query: 63 L--ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + PVR L+LTPTRELA QI +NV+ Y K L +R V+FGGV+++ Q Sbjct: 88 LKRYATSSTSPAMHPVRMLVLTPTRELADQIDQNVQAYIKNLPLRHTVLFGGVNMDKQTA 147 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR G +++VAT GRLLD Q + L++VEI+VLDEADRMLDMGFI DIR+++ LP + Sbjct: 148 DLRAGCEIVVATVGRLLDHVKQKNINLNKVEIVVLDEADRMLDMGFIDDIRKIMQMLPKQ 207 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSATFS I+ LA+ +H P +EVA +NT + V QH+ VD +KR LL +I Sbjct: 208 RQTLLFSATFSPPIRKLAQDFMHTPEMVEVAAQNTTNANVEQHIIAVDALKKRSLLERLI 267 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + QV+VF +TK + + L + I + +IHG+KSQ +R L FK G +RVLV Sbjct: 268 VDLHMNQVIVFCKTKQSVDQVTRDLVRRNIAAQSIHGDKSQQSRLETLNAFKEGTLRVLV 327 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI ELP V+NYELP PEDYVHRIGRTGRA A G A+SL+ E K+ I Sbjct: 328 ATDVAARGLDIAELPFVINYELPTQPEDYVHRIGRTGRAGADGVAISLMDKTEQKMFEAI 387 Query: 361 EKLLKKEIPRIAIPGYEP-------DPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRG 413 ++L ++ I G+EP +A+P+Q+ + R + + Sbjct: 388 KELTGSDLNVERIEGFEPHWWDNDNQNEAEAQPVQHNDSRSRRDDRNKRNEYANKS---- 443 Query: 414 EGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAA 452 S K EK + K AG +R R R+P A Sbjct: 444 ----DKNSKKAEEKNDPGIVCGKIAGRTRRSRHERQPCA 478 >UniRef50_B3RIS6 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RIS6_TRIAD Length = 654 Score = 596 bits (1538), Expect = e-169, Method: Composition-based stats. Identities = 149/428 (34%), Positives = 231/428 (53%), Gaps = 5/428 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF ++ + QG++ PTPIQ Q+ P L GRD++ AQTG+GKT + LP + Sbjct: 79 LSFSEASFPDYVMSEINNQGFKLPTPIQAQSWPVGLSGRDVVGIAQTGSGKTLAYVLPSI 138 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + P G P+ ALIL PTRELA Q+ + + I ++GG PQ+ Sbjct: 139 IHIKNQPPLRHGDGPI-ALILCPTRELAQQVHSVSTTFGRLARINCACIYGGSPKGPQLR 197 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L GV++ VATPGRLLD L++ LVLDEADRMLDMGF I++++ + Sbjct: 198 ELSRGVEICVATPGRLLDFLESRRTNLNRCSYLVLDEADRMLDMGFEPQIKQIIGSIKCP 257 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 RQ +++SAT+ +I+ LA + L + ++I + + T + + Q V ++ K + L + Sbjct: 258 RQTVMWSATWPKEIRTLAREFLRDYVQINIGSSDLTTNHNIKQIVEVCREEEKEDKLCKL 317 Query: 240 IG---KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 + + + ++ +VF TK +++L+ +L + G IHG+K Q R R L++F+SG I Sbjct: 318 LSDILRQDEKKTIVFVETKKKSDYLSRRLVRSGWPVLCIHGDKCQSERDRVLSEFRSGRI 377 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 VL+ATD+AARGLDI ++ V+NY+ PN EDYVHRIGRT R+ TG A + + Sbjct: 378 PVLIATDVAARGLDISDVKLVINYDFPNNSEDYVHRIGRTARSGKTGTAYTFFTASNIRQ 437 Query: 357 LRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 ++ LL++ I + + +AE Q R + G R R Sbjct: 438 SPNLIALLREANQPINPDLIQLGDAARAEMAQKHRGKMRGRDRFYNRDRNASNRYPYAKS 497 Query: 417 AKSASAKP 424 S S Sbjct: 498 KLSGSYNS 505 >UniRef50_D2QWU0 DEAD/DEAH box helicase domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWU0_9PLAN Length = 598 Score = 594 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 222/478 (46%), Positives = 289/478 (60%), Gaps = 29/478 (6%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF+ LGL+ ++RA+ Y EPT IQ QAIP + GRDL AQTGTGKTA F LPLL Sbjct: 1 MSFEDLGLAEPLVRALNAANYTEPTAIQLQAIPPAIAGRDLQGCAQTGTGKTAAFALPLL 60 Query: 61 QHLITRQPHAKGRRP-VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 LI K R RAL+L+PTRELA QI ++VR Y ++ SL ++GGVS PQ+ Sbjct: 61 DRLIKNPRQGKLRGRLPRALVLSPTRELAGQIHDSVRRYGRHAMQNSLTIYGGVSQVPQV 120 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L G DVL+ATPGRL DL Q + L ++E+ VLDEADRMLDMGF+ DIRR++ KLP Sbjct: 121 KGLNAGQDVLIATPGRLCDLMQQGYINLSEIEVFVLDEADRMLDMGFMPDIRRIIAKLPQ 180 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 ++Q LLFSAT +I+ LA +LLH+P+EI + +D +TQ +++V K K ELL+ + Sbjct: 181 QKQTLLFSATMPPEIQKLASQLLHDPVEINIEPERATADGITQSLYYVPTKHKPELLASV 240 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + + +VF RTKHG N A QL K G++ AIHGNKSQ AR R L FK+G I+VL Sbjct: 241 LKREEVTRAVVFVRTKHGCNKAALQLEKTGLKVDAIHGNKSQSARQRTLYAFKNGHIQVL 300 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD+ + HV+NY+LP PE YVHRIGRTGRA +G A+S ++ LLRD Sbjct: 301 VATDVAARGLDVTGVSHVINYDLPMEPETYVHRIGRTGRAGKSGIAISFCDDEQRGLLRD 360 Query: 360 IEKLLKKEIPRIA-----IPGY----EPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQP 410 ++++L K+IP IPG + D K P N + R G G G G G G + Sbjct: 361 VQRILGKKIPVENEMPDGIPGLPANIDRDGGAKRAPWGNKKPFRAGPGGGGGYGGGNRSS 420 Query: 411 RRGEGGAKSASAKPAEKP-----------------SRRLGDAKPAGEQQRRRRPRKPA 451 G KP SR G +P GE R RP++P+ Sbjct: 421 GGSGGSRGFGGRKPYRSGGDRDGQGGGYGAPRDGGSREGGYGRPQGE--RPARPQRPS 476 >UniRef50_B0TII3 Dead/deah box helicase n=18 Tax=Bacteria RepID=B0TII3_HELMI Length = 540 Score = 594 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 149/385 (38%), Positives = 232/385 (60%), Gaps = 6/385 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F + LSP + +A+ + G+ EP+PIQ +AIP +++G+DL+ AQTGTGKTA F +P+ Sbjct: 18 VKFGEIELSPKVAKAIFDMGFEEPSPIQAKAIPVIMQGKDLIGQAQTGTGKTATFGIPMA 77 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L R V+AL+L PTRELA Q+ + + + ++++L V+GG SI+ Q+ Sbjct: 78 ETLNPR------DGRVQALVLCPTRELAIQVAQEISKIGRQNDLKALPVYGGQSIDRQIR 131 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR GV V++ TPGR+LD + ++L+ V ++VLDEAD MLDMGF+ DI +L + P + Sbjct: 132 ALRYGVQVVIGTPGRILDHLSRKTLRLNNVRMVVLDEADEMLDMGFVEDIEAILKETPEE 191 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT I+ LA + + P + ++R + Q + + +K + L ++ Sbjct: 192 RQTLLFSATMPGPIQQLARQYMKEPEFVTISRDKLTVPLIEQVYYECKESQKVDALCRIL 251 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++F RTK G + L L G + +HG+ +Q R R + F+ G +L+ Sbjct: 252 DMEEIGSSIIFCRTKRGVDELVAALETRGYFAEGLHGDLTQAQRDRVMKKFRDGKAELLI 311 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD+E + HV+NY++P PE YVHRIGRTGRA G A++L+ E++ L+ I Sbjct: 312 ATDVAARGLDVENVTHVINYDIPQDPESYVHRIGRTGRAGRKGIAITLINYREYRQLKLI 371 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAE 385 E++ K I R +P + E Sbjct: 372 ERVTKARIQRRDLPSMADIVERQKE 396 >UniRef50_D2QGG1 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=D2QGG1_9SPHI Length = 485 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 219/466 (46%), Positives = 294/466 (63%), Gaps = 16/466 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L L IL+A+ E+GY PTPIQ++AIP +L RDL+ AQTGTGKTA F +P+L Sbjct: 1 MQFSELSLIDPILKALTEEGYTNPTPIQEKAIPILLSRRDLLGCAQTGTGKTAAFAIPIL 60 Query: 61 QHLITRQPHAKG-RRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 Q L + + G R ++ LILTPTRELA QI E+ Y ++LNIR+ V+FGGVS + Q+ Sbjct: 61 QLLSEERSKSTGGPRRIKTLILTPTRELAIQIAESFTAYGRHLNIRNTVIFGGVSQHSQV 120 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ GVDVL+ATPGRLLDL +Q + L V+ VLDEADRMLDMGFIHD+++V+TKLP Sbjct: 121 NTLKAGVDVLIATPGRLLDLMNQGFISLRDVQFFVLDEADRMLDMGFIHDVKKVITKLPT 180 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ+L FSAT D+ LA+ +L+NP ++EV ++ +D + Q ++FV K+ KR+LL H+ Sbjct: 181 HRQSLFFSATMPPDVAKLADTILNNPAKVEVTPVSSTADTIEQAMYFVGKEDKRKLLVHI 240 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + N + LVF RTKHGA+ + + L K GI + AIHGNKSQ AR RAL++FKS + RVL Sbjct: 241 LDDKNIKSALVFARTKHGADKVVKDLLKAGIGAEAIHGNKSQNARQRALSNFKSRETRVL 300 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARG+D++EL HV+NYELPN+PE YVHRIGRTGRA G ALS +E + LRD Sbjct: 301 VATDIAARGIDVDELSHVINYELPNIPETYVHRIGRTGRAGHDGIALSFCDAEETEYLRD 360 Query: 360 IEKLLKKEIPRI---------------AIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGG 404 I KL+ K +P I P + +NG + GG G G Sbjct: 361 IHKLIGKRVPVIDNHPYVLDIATATVTPAPARQGQGRGGNGGNRNGGGRSGGSGSFNRNG 420 Query: 405 RGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKP 450 R G ++ + + + + ++ RP +P Sbjct: 421 NNNNSRRADNSGPARSTDQRSSSSDGSYRRDENSAPKRPSSRPSQP 466 >UniRef50_D2RJY3 DEAD/DEAH box helicase domain protein n=2 Tax=Firmicutes RepID=D2RJY3_ACIFE Length = 544 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 150/374 (40%), Positives = 229/374 (61%), Gaps = 8/374 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF+ L L IL A+ E G+ EP+PIQ+ AIP LEG DL+ AQTGTGKTA F +P++Q Sbjct: 20 SFEDLNLDRKILAALKEMGFEEPSPIQKGAIPMALEGEDLIGQAQTGTGKTAAFGIPIIQ 79 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + + R ++AL+++PTREL Q+ + + K IR L V+GG I Q+ Sbjct: 80 KINEK------DRHIQALVMSPTRELCIQVADEISKIGKTKRIRVLPVYGGQPIERQIRS 133 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G+ V++ TPGRLLD + + L+ V LVLDEAD MLDMGF+ D+ ++ +P +R Sbjct: 134 LKRGIQVVIGTPGRLLDHIRRGTIDLEYVNFLVLDEADEMLDMGFVDDMENIIKNVPPER 193 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q +LFSAT I ++++K + P + + + + + Q+ + + K + L ++ Sbjct: 194 QTMLFSATMPRPILSISKKYMRAPKVVAIHKEVVTAPTIDQYYYET--RDKVDGLCRILD 251 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + ++++F RTK G + L L G + +HG+ SQ R R + F+SG + +LVA Sbjct: 252 TTDDCKMIIFCRTKKGVDELVIALATRGYEAEGLHGDLSQNQRDRVMKKFRSGQVDILVA 311 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLDI+ + HVVN+++P+ E YVHRIGRTGRA TG AL+ + E + L+ IE Sbjct: 312 TDVAARGLDIDNITHVVNFDVPSDSESYVHRIGRTGRAGNTGVALTFITPREFRQLKLIE 371 Query: 362 KLLKKEIPRIAIPG 375 + +K +I R +P Sbjct: 372 RSIKTKIIRGTLPT 385 >UniRef50_C6WW85 DEAD/DEAH box helicase domain protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WW85_METML Length = 576 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 203/459 (44%), Positives = 273/459 (59%), Gaps = 7/459 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF+SL L+P ILRA+ E GY PTPIQ QAIP V+EG DLMASAQTGTGKTAGF LP L Sbjct: 1 MSFESLNLNPAILRAIEETGYTTPTPIQAQAIPVVMEGHDLMASAQTGTGKTAGFMLPAL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L T PH R R L+LTPTRELAAQ+ E R Y K+L R++ + GG+ Q Sbjct: 61 NLLAT--PHESRSRGPRILVLTPTRELAAQVNEAARKYGKFLRARTVSIVGGMPYPLQNK 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L +D+LVATPGRLLD + + L ++++L+LDEADRMLDMGF+ D+ R+ +L A+ Sbjct: 119 LLSQPLDILVATPGRLLDHMERGRIDLSRLQMLILDEADRMLDMGFLPDVERICEQLSAE 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK-RKRELLSHM 239 RQ LLFSAT DI +A+++L NP ++VA + + Q +HFVD K +LL H+ Sbjct: 179 RQTLLFSATLDGDIARIAQQILKNPKTVQVAAQKEKHANIEQRLHFVDDMTHKNKLLEHL 238 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + Q ++FT TK A+ LAE L G ++AA+HG+ +QGAR R L + GD++VL Sbjct: 239 LIAPEVNQTIIFTSTKRHADVLAEDLYAAGHKTAALHGDMTQGARNRTLTKLRHGDVKVL 298 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+ + HV+NY+LP EDYVHRIGRTGRA TG A+S + LLR Sbjct: 299 VATDVAARGIDVHGITHVINYDLPKFAEDYVHRIGRTGRANNTGIAISFASNMDRHLLRK 358 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQ--RGGGGRGQGGGRGQQQPRRGEGGA 417 IE+ + I G+EP +K + GR+ + GG G + +G Sbjct: 359 IEQYTGNRLEASVIEGFEPKRPVKMDGPSGGRRDGHKAGGRGGFKSRDDRGGFGGRDGNR 418 Query: 418 KSASAKPAEKPSRRLGDAKPA--GEQQRRRRPRKPAAAQ 454 + +P+ + R R A + Sbjct: 419 GDNRGGSRHESRGDNRSERPSFNRDSNESRGNRDSAPRE 457 >UniRef50_A2SQE1 DEAD/DEAH box helicase domain protein n=17 Tax=cellular organisms RepID=A2SQE1_METLZ Length = 656 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 145/385 (37%), Positives = 222/385 (57%), Gaps = 7/385 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F +S ++L+A+ + G+ EPTPIQ AIP +L+G+D+ AQTGTGKTA F +P+++ Sbjct: 6 TFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPIIE 65 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 L + V+AL+L+PTRELA Q E KY + + ++GG I Q+ Sbjct: 66 RLD------PDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLR 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+G V V++ TPGR++D + + LD V + +LDEAD+MLDMGF DI + P Sbjct: 120 ALKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIEDIFRDTPKD 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT I + + +P +++ R+ Q+ Q V ++ K E L + Sbjct: 180 RQTILFSATMPQPILDITRRFQRDPQFVKITRKELTVPQIEQTYIEVRERDKLEALCRTL 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 N + LVF TK + L ++ G A+HG+ Q R R +A F+SG I VL+ Sbjct: 240 DMNNPELALVFCNTKRTVDDLMSRMQARGYFVEALHGDMKQQQRDRVMARFRSGSIDVLI 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+D++++ V NY++P E YVHRIGRT RA TG++++ V E LRDI Sbjct: 300 ATDVAARGIDVDDVDIVFNYDVPQDVEYYVHRIGRTARAGRTGKSVTFVAPREIYKLRDI 359 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAE 385 ++ K +I + +P + +K + Sbjct: 360 QRYAKIQIAKTPLPTLDDVAEMKQQ 384 >UniRef50_P24782 ATP-dependent RNA helicase dbp2 n=63 Tax=Eukaryota RepID=DBP2_SCHPO Length = 550 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 151/387 (39%), Positives = 225/387 (58%), Gaps = 6/387 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ G +L+ V + G+ PTPIQQQA P + GRD++ + TG+GKT + LP + Sbjct: 123 TFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAIV 182 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + + G P+ L+L PTRELA QI + + K IR+ V+GGV PQ+ Sbjct: 183 HINAQPLLSPGDGPI-VLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRD 241 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GV++ +ATPGRLLD+ N L +V LVLDEADRMLDMGF IR+++ ++ R Sbjct: 242 LIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR 301 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTAS-DQVTQHVHFVDKKRKRELLSHMI 240 Q ++FSAT+ +++ LA L++ +++ V + A+ + Q V VD KR L I Sbjct: 302 QTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKDI 361 Query: 241 GK---GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + +VL+FT TK A+ + L +DG + AIHG+K+Q R L +F++G Sbjct: 362 EEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSP 421 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 ++VATD+A+RG+D++ + HV NY+ P EDYVHRIGRTGRA A G A + D K Sbjct: 422 IMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQA 481 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKA 384 R++ +L + I P E + Sbjct: 482 RELVSILSEAKQDID-PKLEEMARYSS 507 >UniRef50_Q5L3G9 DEAD-box ATP-dependent RNA helicase cshA n=94 Tax=Firmicutes RepID=CSHA_GEOKA Length = 467 Score = 592 bits (1529), Expect = e-168, Method: Composition-based stats. Identities = 152/377 (40%), Positives = 230/377 (61%), Gaps = 6/377 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS ++++A+ G+ E TPIQ + IP L+ +D++ AQTGTGKTA F +P+++ Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + + V+AL++ PTRELA Q+ E + +R L ++GG I Q+ Sbjct: 63 KVNVKNS------AVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRA 116 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ V+V TPGR++D ++ ++L+ V +VLDEAD ML+MGFI DI +L+ +PA+R Sbjct: 117 LKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAER 176 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT D I+ +AE+ ++ P ++V + + Q+ V +K+K ++L+ ++ Sbjct: 177 QTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTRLLD 236 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +VF RTK + LAE LN G + IHG+ SQ R L FK G I +LVA Sbjct: 237 IQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVA 296 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLDI + HV N+++P PE YVHRIGRTGRA TG A++ V E L IE Sbjct: 297 TDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIE 356 Query: 362 KLLKKEIPRIAIPGYEP 378 + K+++ R+ P + Sbjct: 357 RTTKRKMERMKPPTLDE 373 >UniRef50_C9RPH4 DEAD/DEAH box helicase domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RPH4_FIBSS Length = 486 Score = 591 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 215/457 (47%), Positives = 285/457 (62%), Gaps = 12/457 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+ L L+ + RAV GY PTPIQ+++IP++LEG+DL+ AQTGTGKTA F LP+L Sbjct: 1 MKFEELPLANPLQRAVRAVGYETPTPIQERSIPSLLEGKDLLGIAQTGTGKTAAFALPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L+ + + RALIL PTRELA Q+ + R+Y+++ I + +FGGV+ NPQ Sbjct: 61 QRLLDSGKF-RSPKTCRALILLPTRELAIQVEDCFREYAQFTAISTACIFGGVNDNPQKQ 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL GVDVLVATPGRLLDL Q A+ L ++E VLDEADRMLDMGFIHDIR+V+ LP Sbjct: 120 KLIRGVDVLVATPGRLLDLIGQKAISLKKLEFFVLDEADRMLDMGFIHDIRKVVAMLPQD 179 Query: 181 RQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQNL FSAT ++I LA +L NP+ +EVA ++T +++ Q ++ +DK+RK LL + Sbjct: 180 RQNLFFSATMPEEISKLAATILRPNPVRVEVAPQSTPIERIRQELYRIDKRRKGALLKEL 239 Query: 240 IGKG-NWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 + + ++VLVF RTKHGA+ + L K GI+ AAIHGNKSQ R AL +FK IRV Sbjct: 240 LAEHPEMKKVLVFCRTKHGADKIVRVLEKAGIKCAAIHGNKSQNRRQEALGNFKCEQIRV 299 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATDIAARG+D++++ HV NY+LPN E +VHRIGRT RA G A+S DE LR Sbjct: 300 LVATDIAARGIDVDDVSHVFNYDLPNEHETFVHRIGRTARAGKEGVAISFCSPDEESDLR 359 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQN-GRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 IEKL + +IP YE P + E ++ R RG R + R + R G Sbjct: 360 GIEKLTRVKIPEGDQSIYENLPPPQKETAESMMRNSRGRMSREEAQARAAET-RNNRGNR 418 Query: 418 KSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 K K + + P +Q R P + Q Sbjct: 419 KGNHGK-------QNSNNAPHNSEQISRNPAQNVTVQ 448 >UniRef50_C4XQY7 ATP-dependent RNA helicase n=7 Tax=Deltaproteobacteria RepID=C4XQY7_DESMR Length = 496 Score = 591 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 202/462 (43%), Positives = 277/462 (59%), Gaps = 18/462 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSFDS L ++ + GY PTPIQ +A+P V+EG DLM AQTGTGKTA F LP+L Sbjct: 1 MSFDSFCLHDSLIANIKRAGYETPTPIQAEAVPHVMEGHDLMGLAQTGTGKTAAFLLPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 LIT + R LIL PTRELA QI + D+ + +R+ V++GGV + PQ+ Sbjct: 61 HRLITNPARTRS---PRTLILAPTRELAEQIFRSTLDFMRGTRLRATVIYGGVGMFPQVR 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR GVDV+VA PGRLLD +Q V+ D +E LVLDEAD M DMGF+ DI+R+L LPAK Sbjct: 118 ALRQGVDVIVACPGRLLDHLNQGNVRFDGLETLVLDEADHMFDMGFLPDIKRILAALPAK 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT I LA + L +P+ + + V ++ V +K LL H++ Sbjct: 178 RQTLLFSATMPPAISGLAAETLTDPVTVRIGHL-APLSTVEHAIYPVSHNQKAPLLLHLL 236 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 G+ + V+VFTRTKH A +LA+QL + G ++ + GN SQ R A+ F+ G ++LV Sbjct: 237 GEAGKESVIVFTRTKHRAKNLAQQLCRSGHKATCLQGNLSQRQRQIAMDGFRRGSFQILV 296 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ ++ HVVN+++P+ E Y HRIGRTGRA G+A + V ++ ++R I Sbjct: 297 ATDIAARGIDVSQVAHVVNFDIPDTAEAYTHRIGRTGRAERDGQAHTFVTGEDMGMVRAI 356 Query: 361 EKLLKKEIPRIAIPGYEPDP----SIKAEPIQNGRQQRGGGGRGQGG-GRGQQQPRRGEG 415 E +KK +PR + G+EP+P P R ++G G QGG G Q+Q R G Sbjct: 357 ESHMKKPLPRRNVEGFEPEPGEFRRSAPAPRSAARPRQGYGAPRQGGYGDRQRQGDRPYG 416 Query: 416 ---------GAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPR 448 GA++ SA+ S R +PA ++ R RPR Sbjct: 417 DRPRGPRPEGARADSARDDRPRSDRPRSDRPAADRPRSDRPR 458 >UniRef50_A0RP33 Putative ATP-dependent RNA helicase RhlE n=2 Tax=Campylobacter fetus RepID=A0RP33_CAMFF Length = 624 Score = 591 bits (1525), Expect = e-167, Method: Composition-based stats. Identities = 210/433 (48%), Positives = 289/433 (66%), Gaps = 5/433 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F LS IL A+ E Y PT IQQ AIPA+++G+D++A A+TGTGKTA F LP+L Sbjct: 1 MLFSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L +++ K R R L+L PTRELA Q+ +N++ Y+K L ++L VFGGVS PQ+ Sbjct: 61 EKLSSKE-RNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQ 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ G+D++VATPGRLLDL QNA+ L+ ++ LV DEADRM DMGFIHDI++++ LP K Sbjct: 120 ALKSGIDIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLPEK 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSAT+ ++ +L +L +PL I++ +N+ + + Q V VD+ +K ELL+ + Sbjct: 180 RQNLLFSATYPSEVMSLCNSMLKDPLRIQIEEQNSTALNIIQRVILVDRDKKMELLNEVF 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 G + Q LVFTRTK A+ + L+ G AA+HG+KSQ R++ L FK+G ++LV Sbjct: 240 GVESIDQALVFTRTKRSADKCSSYLHTLGFSVAALHGDKSQSVRSKTLEKFKNGKTKILV 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARGLDI+ELP V+N ELPNVPEDYVHRIGRTGRA G A+SLVCVDE K L DI Sbjct: 300 ATDIAARGLDIKELPFVINLELPNVPEDYVHRIGRTGRAGNDGVAISLVCVDEFKFLIDI 359 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGG----RGQQQPRRGEGG 416 EKL+ K++ R + G+E D +K +PI+ G+ R G + +++PR Sbjct: 360 EKLIDKKLIRESFSGFEADLRVKPQPIRRGQNMNKSSERDDRNGNKIDKKERKPREFNSD 419 Query: 417 AKSASAKPAEKPS 429 K S + + Sbjct: 420 KKDESKRGRNRDD 432 >UniRef50_B7VQT9 ATP-dependent RNA helicase n=15 Tax=Bacteria RepID=B7VQT9_VIBSL Length = 523 Score = 591 bits (1524), Expect = e-167, Method: Composition-based stats. Identities = 243/447 (54%), Positives = 313/447 (70%), Gaps = 7/447 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF SLGLS IL+A+ QGY +P+PIQ++A+PAVL G+D+MA+AQTGTGKTAGFTLP+L Sbjct: 1 MSFTSLGLSEPILKAIEAQGYDKPSPIQEKAVPAVLTGKDVMAAAQTGTGKTAGFTLPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L + + VRAL+LTPTRELAAQ+ +V Y L + S VVFGGV INPQM Sbjct: 61 EMLSKGPRVRQNQ--VRALVLTPTRELAAQVNGSVVKYGINLPLTSTVVFGGVKINPQMQ 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KLR G DVLVATPGRLLDL +QNAV+ DQ+EILVLDEADRMLDMGFI DIR++L LP K Sbjct: 119 KLRKGSDVLVATPGRLLDLYNQNAVRFDQLEILVLDEADRMLDMGFIRDIRKILAFLPKK 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSATFSDDI++LA+ L++NP+EI V+ N+ + V Q ++ VDKK+K +L+ +I Sbjct: 179 RQNLLFSATFSDDIRSLAKGLVNNPVEISVSPANSTAPTVEQSIYPVDKKKKAPMLAKLI 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 +W+QVLVF++TKHGAN LA L + I SA IHGNKSQGART+AL +FK+G +RVLV Sbjct: 239 KDNDWRQVLVFSKTKHGANKLARFLEEQDITSAPIHGNKSQGARTKALENFKTGKVRVLV 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+DI +LP VVN++LPNV EDYVHRIGRTGRA G+A+SLVC DE L I Sbjct: 299 ATDIAARGIDIPQLPQVVNFDLPNVSEDYVHRIGRTGRAGEVGKAISLVCADEVGELFGI 358 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 E+L+++ + R + G+ P + + + + + + GQ+ G + Sbjct: 359 ERLIQQVLERRELEGFAPVNKLPESRLDSRPIKPKKPKKTREHSDGQRSGENARGHKPAG 418 Query: 421 SAKP-----AEKPSRRLGDAKPAGEQQ 442 K P R+ A + Sbjct: 419 KNKRHVAGNGSAPKRKPNSGNKASDSN 445 >UniRef50_Q81IT9 DEAD-box ATP-dependent RNA helicase cshA n=84 Tax=cellular organisms RepID=CSHA_BACCR Length = 533 Score = 590 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 158/377 (41%), Positives = 229/377 (60%), Gaps = 6/377 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS +L++V G+ E TPIQ + IP L+G+D++ AQTGTGKTA F LPLL Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + T + V+ +++ PTRELA Q+GE + K+ +R L ++GG IN Q+ Sbjct: 63 KVDTHKES------VQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRA 116 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ ++V TPGR+LD ++ ++L VE +VLDEAD ML+MGFI DI +LT +P Sbjct: 117 LKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT D I+ +AE+ + P I+V + + Q V +K+K ++L+ ++ Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLD 236 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + + +VF RTK + L+E LN G + IHG+ +Q R L FK G I VLVA Sbjct: 237 IQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVA 296 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLDI + HV N+++P PE YVHRIGRTGRA G A+ V E L++IE Sbjct: 297 TDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIE 356 Query: 362 KLLKKEIPRIAIPGYEP 378 + K+++ R+ P + Sbjct: 357 RTTKRKMDRMDAPTLDE 373 >UniRef50_P24783 ATP-dependent RNA helicase DBP2 n=131 Tax=Eukaryota RepID=DBP2_YEAST Length = 546 Score = 589 bits (1520), Expect = e-167, Method: Composition-based stats. Identities = 147/379 (38%), Positives = 221/379 (58%), Gaps = 8/379 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD G +L V +G+ +PT IQ Q P L GRD++ A TG+GKT + LP + Sbjct: 114 TFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIV 173 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + A G P+ L+L PTRELA QI + IR+ V+GGV + Q+ Sbjct: 174 HINAQPLLAPGDGPI-VLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRD 232 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L G ++++ATPGRL+D+ L +V LVLDEADRMLDMGF IR+++ ++ R Sbjct: 233 LSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR 292 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMI 240 Q L++SAT+ ++K LA L++P++++V +AS +TQ V V KR+ L+ + Sbjct: 293 QTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVVSDFEKRDRLNKYL 352 Query: 241 G---KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + N + L+F TK + + + L +DG + AIHG+K Q R L +F++G Sbjct: 353 ETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSP 412 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL- 356 ++VATD+AARG+D++ + +V+NY++P EDYVHRIGRTGRA ATG A+S L Sbjct: 413 IMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLG 472 Query: 357 --LRDIEKLLKKEIPRIAI 373 L I + + IP + Sbjct: 473 AKLISIMREANQNIPPELL 491 >UniRef50_A9KIB7 DEAD/DEAH box helicase domain protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIB7_CLOPH Length = 514 Score = 589 bits (1520), Expect = e-167, Method: Composition-based stats. Identities = 198/434 (45%), Positives = 286/434 (65%), Gaps = 8/434 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F+ + L +L+A+ E+G+ EP+PIQ++ IP VLEGRD++ AQTGTGKTA F LP+L Sbjct: 1 MNFNEMNLIKPLLQAIKEEGFIEPSPIQKKTIPLVLEGRDILGCAQTGTGKTAAFALPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L + VRALI+TPTRELA QI E+ + KY +++ V++GGV + Q+ Sbjct: 61 QSLSKGEGS-----GVRALIITPTRELAIQIYESFECFGKYTSLKQSVIYGGVGQSLQVN 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ G+D+L+ATPGRL DL Q + LD +E+ VLDEAD+MLDMGF++DI++V+ LP Sbjct: 116 SLKAGIDILIATPGRLNDLIGQGYITLDAIEMFVLDEADQMLDMGFLNDIKKVIKLLPKT 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT +I++LA LL+NP I+++ + D + Q V+FVD+ K LL+ +I Sbjct: 176 RQTLLFSATMPKEIESLATNLLNNPEIIKISPVTSTVDSIEQSVYFVDRLNKISLLTSLI 235 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +VLVFT+TKHGA+ +A++LNK +++ AIHG K Q AR AL+DFK G I+VLV Sbjct: 236 KEHKMSRVLVFTKTKHGADRVADKLNKAKVKTQAIHGGKGQNARQTALSDFKEGKIKVLV 295 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+DI EL +VVNY++PN E Y+HRIGRTGRA G A++L +D+ LR+I Sbjct: 296 ATDIAARGIDISELSYVVNYDIPNQAEIYIHRIGRTGRAGLGGNAINLCNIDDMDYLREI 355 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 EK + IP + +P++ R + G+ + +++ EG K+ Sbjct: 356 EKHIGMVIPEVPSKWPMLILEKTEKPVRGQRPENTTKNVGKESVKTEEKILLNEGAKKTK 415 Query: 421 SAKPAEKPSRRLGD 434 + K KP + G+ Sbjct: 416 AHK---KPVYKTGE 426 >UniRef50_B8ILJ8 DEAD/DEAH box helicase domain protein n=10 Tax=Alphaproteobacteria RepID=B8ILJ8_METNO Length = 506 Score = 589 bits (1520), Expect = e-167, Method: Composition-based stats. Identities = 227/492 (46%), Positives = 296/492 (60%), Gaps = 40/492 (8%) Query: 1 MS-FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPL 59 M+ F GL+ I++A+AE GY PTPIQ QA+P + GRDL AQTGTGKTA F LP+ Sbjct: 1 MTQFVDFGLAAPIMKALAETGYVTPTPIQAQAVPPAMTGRDLCGIAQTGTGKTAAFALPI 60 Query: 60 LQHLITRQPHAKG-RRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 L L + P + RR R L+L+PTRELA+QI ++ RDY K+L + VVFGGV+I Q Sbjct: 61 LHRLASETPAKRAPRRGCRVLVLSPTRELASQIADSFRDYGKFLPFSTTVVFGGVTIGRQ 120 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L G+DVLVATPGRLLDL + ++ LD VE LVLDEAD+MLD+GFIH ++R++T LP Sbjct: 121 ERALANGIDVLVATPGRLLDLVDRRSLSLDSVEYLVLDEADQMLDLGFIHALKRIVTLLP 180 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ+L FSAT +I LA + L +P+++ V T +++V Q V V K+ LL Sbjct: 181 KARQSLFFSATMPKNIATLAAQYLRDPVQVAVTPVATTAERVEQRVIHVSTGAKQALLGT 240 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + +VLVFTRTKHGA+ + L K GI SAAIHGNKSQ R RALA F++G RV Sbjct: 241 ILRDESIDRVLVFTRTKHGADRVVRGLEKVGIGSAAIHGNKSQPQRERALAAFRAGTCRV 300 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATDIAARG+D+E + HVVN++LPNVPE YVHRIGRT RA A G A+S +E LR Sbjct: 301 LVATDIAARGIDVEGVTHVVNFDLPNVPEAYVHRIGRTARAGADGLAISFCNEEERAYLR 360 Query: 359 DIEKLLKKEIPRIAIP-GYEP--DPSIKAEPIQNGRQQRGGGGRGQGGGRGQ-------- 407 DIE+L ++++P +AIP G+ P + R +R G RGQ GR Sbjct: 361 DIERLTRQKVPEMAIPVGFVPPSRQEAAEAVAEAERDRRQPGPRGQRPGRSHGARPQGGP 420 Query: 408 ----------------QQPRRGEGGAKSASAKP----------AEKPSRRLGDAKPAGEQ 441 + R +GG + A+P A + G +P G Q Sbjct: 421 GGRPQGGRQHGQGGRPGEGRPRDGGRPAQEARPGRPAQDGRPAAHRAEGPKGHGRPQG-Q 479 Query: 442 QRRRRPRKPAAA 453 R R R PA Sbjct: 480 PHRDRGRAPAQG 491 >UniRef50_A9GRX1 DeaD2 protein n=5 Tax=Bacteria RepID=A9GRX1_SORC5 Length = 478 Score = 588 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 218/390 (55%), Positives = 269/390 (68%), Gaps = 3/390 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L L +LRA+ +GY PTPIQQQAIP +LEG DL+ AQTGTGKTA F LP+L Sbjct: 1 MQFADLKLIEPLLRAIEAEGYSAPTPIQQQAIPPILEGNDLLGCAQTGTGKTAAFALPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L Q + +R L+LTPTRELAAQ+ E+ Y K L +R+ VVFGGV PQM Sbjct: 61 QRLA--QSGGPRQGGLRVLVLTPTRELAAQVAESFTTYGKNLGLRTAVVFGGVGQRPQME 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR GVDVLVATPGRLLDL Q +++ LVLDEADRMLDMGFIHDIRRVL LP + Sbjct: 119 ALRRGVDVLVATPGRLLDLCSQGIAPFGRLDTLVLDEADRMLDMGFIHDIRRVLAMLPER 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT DI LA +L +P+ +EVAR T ++ + Q V FV++ KR +L H++ Sbjct: 179 RQTLLFSATMPPDILKLANSILRSPVRVEVARIATTAENIDQRVVFVERSDKRAMLEHVL 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++ +VFTRTKHGAN + +QL++ I + AIHGNKSQGAR RALA FK G VLV Sbjct: 239 KDPALRRAIVFTRTKHGANRVVQQLSRARIEAVAIHGNKSQGARERALASFKQGTTSVLV 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+DI+++ HV+NY+LPN+PE YVHRIGRT RA A+G ALS +E L DI Sbjct: 299 ATDIAARGIDIDDISHVINYDLPNIPESYVHRIGRTARAGASGVALSFCDSEERAYLADI 358 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 E+L++K +P +A PG P I P Q Sbjct: 359 ERLIQKRLPLLADPGV-PVFQIDPRPAQQA 387 >UniRef50_Q8MZI3 CG10077, isoform A n=15 Tax=Eukaryota RepID=Q8MZI3_DROME Length = 818 Score = 587 bits (1515), Expect = e-166, Method: Composition-based stats. Identities = 151/457 (33%), Positives = 242/457 (52%), Gaps = 6/457 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F+ G ++ + +QG+ +PT IQ Q P + GRDL+ AQTG+GKT + LP + Sbjct: 157 IEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAV 216 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + +G P+ AL+L PTRELA QI + ++ ++R+ +FGG Q Sbjct: 217 VHINNQPRLERGDGPI-ALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQAR 275 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GV++++ATPGRL+D + L + LVLDEADRMLDMGF IR+++ ++ Sbjct: 276 DLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPD 335 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 RQ L++SAT+ +++ LAE+ L+N +++ + + +A+ + Q V D+ K L + Sbjct: 336 RQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKL 395 Query: 240 IGK---GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 + N + ++F TK + + +++ G R+ AIHG+KSQ R L+ F++G Sbjct: 396 LTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRH 455 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 +LVATD+AARGLD++++ V+NY+ P+ EDYVHRIGRTGR+ TG A +L Sbjct: 456 SILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANK 515 Query: 357 LRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 D+ ++L++ I + G GG G G Q G Sbjct: 516 ANDLIQVLREANQTINPKLMNMAMNGGYNKRGGGMGGGYRGGNGYQGRNPQMGGGYNGGN 575 Query: 417 AKSASAKPAEKPSRRLGDAKPAGEQQR-RRRPRKPAA 452 + P +R + AG R ++PR Sbjct: 576 NYRNNNGPGATMNRNSFNGGSAGGPPRFDQKPRTSPP 612 >UniRef50_B0SEU1 Superfamily II DNA and RNA helicase n=5 Tax=cellular organisms RepID=B0SEU1_LEPBA Length = 471 Score = 587 bits (1514), Expect = e-166, Method: Composition-based stats. Identities = 204/450 (45%), Positives = 284/450 (63%), Gaps = 12/450 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L L I +AVAE GY +PTPIQ QAIP +L+ DL+ AQTGTGKTA F LP++ Sbjct: 7 TFSDLKLDRYIQKAVAETGYTKPTPIQIQAIPLLLDNHDLLGCAQTGTGKTAAFALPMIH 66 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 +LI+ + ++P R+L+L PTRELA Q+ E+ Y KY IR+ V+FGGV NPQ Sbjct: 67 NLISTRAKPNPKQP-RSLVLVPTRELAIQVHESFVLYGKYTQIRTAVIFGGVGQNPQAKA 125 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 + G+DVL+ATPGRL+DL +QN V L +EI VLDEADRMLDMGFIHDIR++++ LP +R Sbjct: 126 IASGLDVLIATPGRLVDLMNQNLVSLKNLEIFVLDEADRMLDMGFIHDIRKIISYLPKRR 185 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 QNL FSAT +I+ LA +L P+ I+V ++ + ++Q V + + K+ LL H+ Sbjct: 186 QNLFFSATMPPEIEKLANSILVEPIRIDVTPVSSTVELISQSVMYTELADKKNLLLHLFK 245 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 N+++ ++FT+TKHGAN ++E LNK GI++ IHGNKSQ AR RAL DF+SG R LVA Sbjct: 246 DKNFKKTIIFTKTKHGANKISELLNKSGIKTDVIHGNKSQSARQRALEDFRSGKNRALVA 305 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARG+DI+++ HV+NYE+P VPE YVHRIGRT RA G A+++ DE L++DIE Sbjct: 306 TDLAARGIDIDDITHVINYEIPYVPETYVHRIGRTARAGKNGIAIAIAEADERSLIKDIE 365 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSAS 421 K++ IP + P R + G + G G R +S Sbjct: 366 KVIGISIPVD-----------RDHPYHAARVESHTGKAPKLHGSGGGGNRGQRRPTQSGD 414 Query: 422 AKPAEKPSRRLGDAKPAGEQQRRRRPRKPA 451 + + + + + Q + RKP+ Sbjct: 415 SSSGRNRNSQQNSKQNSNRSQGQSEKRKPS 444 >UniRef50_A6T3R2 ATP-dependent RNA helicase n=86 Tax=Bacteria RepID=A6T3R2_JANMA Length = 778 Score = 586 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 158/389 (40%), Positives = 227/389 (58%), Gaps = 7/389 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L LS +LR + E GY P+PIQ IP +L RD++ AQTGTGKTA F LP+L Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMK 121 + +Q +AL+L PTRELA Q+ E + Y+ Y+ L ++GG S Q+ Sbjct: 69 IDIKQT------TPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSA 122 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GV V+V TPGR++D + ++ L +++ +VLDEAD ML MGFI D+ +L K P R Sbjct: 123 LRRGVHVVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTPESR 182 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT IK +A L +P I VA + +D + Q V +K + L+ ++ Sbjct: 183 QTALFSATMPSAIKRIATTYLRDPDLITVAAKTGTADNIRQRYWLVSGMQKLDALTRILE 242 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 N+ +++F RTK G LA +L G +AAI+G+ Q R R + K G I +LVA Sbjct: 243 AENFDGMIIFARTKLGTEELASKLQARGFSAAAINGDIQQQQRERTIQQLKDGKIDILVA 302 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + HV+NY++P+ PE Y HRIGRTGRA +GEA+ + E LL+ IE Sbjct: 303 TDVAARGLDVERISHVINYDVPHDPESYTHRIGRTGRAGRSGEAILFIAPRERNLLKAIE 362 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 + ++ I + +P E ++ + Sbjct: 363 RATRQPISVLELPSVEAVNDVRISRFKEQ 391 >UniRef50_C6VX00 DEAD/DEAH box helicase domain protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VX00_DYAFD Length = 590 Score = 586 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 161/387 (41%), Positives = 239/387 (61%), Gaps = 7/387 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ LGL+ +IL+A+ E G+ +P+PIQ Q IPAVL+G D++ AQTGTGKTA F +P+L+ Sbjct: 8 TFEELGLNENILKALQEMGFEKPSPIQAQGIPAVLQGSDVIGQAQTGTGKTAAFGIPVLE 67 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 + T V+ALIL PTRELA Q+ E + SK++ +R ++GG SI+ Q+ Sbjct: 68 RIDT------SSNAVQALILCPTRELAVQVSEELGRLSKFMRGVRIEAIYGGDSIDRQIR 121 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GV ++V TPGR++D + +K D+V ++VLDEAD MLDMGF DI +L +P Sbjct: 122 SLKKGVHIVVGTPGRVMDHMERRTLKFDEVRMMVLDEADEMLDMGFREDIESILADMPED 181 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT S I ++ ++ L++P I+V R + + Q V + K E+++ +I Sbjct: 182 RQTILFSATMSKPIMSITKRFLNDPTLIKVVRNELTNQNIEQVYFEVKPQAKVEVMTRLI 241 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + +LVF TK + + E L G S IHG+ Q R+ ++ FK+G +LV Sbjct: 242 DMHHIKSLLVFCNTKRKVDEIVEDLQLRGYASEGIHGDLRQQQRSNVMSKFKAGVTTILV 301 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+D+ L V+NY++P E YVHRIGRTGRA +G+A SLV DE L+ I Sbjct: 302 ATDVAARGIDVSGLDGVINYDIPMDEEYYVHRIGRTGRAGMSGKAFSLVARDEKYRLKSI 361 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPI 387 E K +I + IP +E ++ Sbjct: 362 ESYTKVKIEKGVIPSFEDIVGVRKARF 388 >UniRef50_Q65N62 DEAD-box ATP-dependent RNA helicase cshA n=135 Tax=Firmicutes RepID=CSHA_BACLD Length = 487 Score = 586 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 152/378 (40%), Positives = 226/378 (59%), Gaps = 6/378 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F LS D+ +A+ G+ E TPIQ Q IP L +D++ AQTGTGKTA F +PL+ Sbjct: 3 ITFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLV 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + P+ ++A+++ PTRELA Q+ E + + R L ++GG I Q+ Sbjct: 63 EKINPESPN------IQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIR 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ ++V TPGRLLD ++ ++L V +VLDEAD ML+MGFI DI +L+ +PA+ Sbjct: 117 ALKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAE 176 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT IK +AE+ + NP ++V + + Q V +++K + L+ ++ Sbjct: 177 HQTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLL 236 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + +VF RTK + L E LN G + IHG+ +Q R AL FK G I VLV Sbjct: 237 DIQSPELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLV 296 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI + HV N+++P PE YVHRIGRTGRA TG A++ + E +LR I Sbjct: 297 ATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAI 356 Query: 361 EKLLKKEIPRIAIPGYEP 378 E+ K+++ R+ P + Sbjct: 357 EQTTKRKMDRMKAPTLDE 374 >UniRef50_A6M3F5 DEAD/DEAH box helicase domain protein n=5 Tax=Clostridium RepID=A6M3F5_CLOB8 Length = 525 Score = 586 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 158/383 (41%), Positives = 236/383 (61%), Gaps = 9/383 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +LGL I++A+++ G+ +P+ IQ+Q+IP L G DL+ AQTGTGKTA ++LP++ Sbjct: 6 FATLGLKESIVKAISDLGFTKPSQIQEQSIPVTLSGADLIGQAQTGTGKTAAYSLPIITK 65 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + R +++LIL PTRELA Q+ E ++ SKY I +L V+GG SI+ Q+ L Sbjct: 66 MSDN-------RGIKSLILAPTRELAVQVNEEIQRLSKYEKIVTLAVYGGDSIDRQIRAL 118 Query: 123 RGG-VDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 R G VD++V TPGR+LDL + + L+ +E LVLDEAD ML+MGFI DI+ +L+ P++R Sbjct: 119 RKGDVDIVVGTPGRILDLVKRKCLHLESIEFLVLDEADEMLNMGFIDDIQEILSHTPSER 178 Query: 182 QNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT D I LA+K + + + + R + ++ Q ++ K + E L ++ Sbjct: 179 QTLLFSATMPDPIAKLAKKYMKPDAKLVSIKRSSLTVSKIEQSYFMINNKHRLEALCRLL 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 N ++F RTK G + L ++L G +HG+ +Q R L FK G + +L+ Sbjct: 239 DLDNPSSAIIFCRTKRGVDELVQELQSKGYMVEGMHGDMTQAHRLTTLNKFKEGTLNLLI 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+D+E + HV NY+LP E YVHRIGRTGRA +G A SLV + +L+ I Sbjct: 299 ATDVAARGIDVEGVTHVFNYDLPQDVESYVHRIGRTGRANKSGTAYSLVTPKDFSMLKQI 358 Query: 361 EKLLKKEIPRIAIPGYEPDPSIK 383 + + K I + +P E + K Sbjct: 359 QNVTKSSITQKPVPTAEEINNKK 381 >UniRef50_P17844 Probable ATP-dependent RNA helicase DDX5 n=52 Tax=Fungi/Metazoa group RepID=DDX5_HUMAN Length = 614 Score = 586 bits (1511), Expect = e-166, Method: Composition-based stats. Identities = 143/434 (32%), Positives = 229/434 (52%), Gaps = 13/434 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F +++ +A Q + EPT IQ Q P L G D++ AQTG+GKT + LP + Sbjct: 94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI 153 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + +G P+ L+L PTRELA Q+ + +Y + ++S ++GG PQ+ Sbjct: 154 VHINHQPFLERGDGPI-CLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIR 212 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GV++ +ATPGRL+D L + LVLDEADRMLDMGF IR+++ ++ Sbjct: 213 DLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPD 272 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 RQ L++SAT+ +++ LAE L + + I + +A+ + Q V K E L + Sbjct: 273 RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRL 332 Query: 240 IGK---GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 + + + +VF TK + L ++ +DG + IHG+KSQ R L +FK G Sbjct: 333 MEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKA 392 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 +L+ATD+A+RGLD+E++ V+NY+ PN EDY+HRIGRT R+ TG A + + K Sbjct: 393 PILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQ 452 Query: 357 LRDIEKLLKKEIPRIA------IPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQP 410 + D+ +L++ I + S +++ R+ R G+ GG + Sbjct: 453 VSDLISVLREANQAINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSA--GKRGGFNTFRD 510 Query: 411 RRGEGGAKSASAKP 424 R S+ K Sbjct: 511 RENYDRGYSSLLKR 524 >UniRef50_Q92841 Probable ATP-dependent RNA helicase DDX17 n=25 Tax=Bilateria RepID=DDX17_HUMAN Length = 650 Score = 586 bits (1511), Expect = e-166, Method: Composition-based stats. Identities = 146/447 (32%), Positives = 230/447 (51%), Gaps = 11/447 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F ++ + +Q + EPTPIQ Q P L GRD++ AQTG+GKT + LP + H Sbjct: 94 FHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVH 153 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + + +G P+ L+L PTRELA Q+ + DY K ++S ++GG PQ+ L Sbjct: 154 INHQPYLERGDGPI-CLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDL 212 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 GV++ +ATPGRL+D L + LVLDEADRMLDMGF IR+++ ++ RQ Sbjct: 213 ERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQ 272 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMIG 241 L++SAT+ +++ LAE L + +I V +A+ + Q V + K L ++ Sbjct: 273 TLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLME 332 Query: 242 K---GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 + + ++F TK + L ++ +DG + IHG+KSQ R L +F+SG + Sbjct: 333 EIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPI 392 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 L+ATD+A+RGLD+E++ V+NY+ PN EDYVHRIGRT R+ G A + K R Sbjct: 393 LIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAR 452 Query: 359 DIEKLLKKEIPRI--AIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRR---- 412 ++ K+L++ I + R + + RR Sbjct: 453 ELIKVLEEANQAINPKLMQLVDHRGGGGGGGGRSRYRTTSSANNPNLMYQDECDRRLRGV 512 Query: 413 GEGGAKSASAKPAEKPSRRLGDAKPAG 439 +GG + +++ + R G A +G Sbjct: 513 KDGGRRDSASYRDRSETDRAGYANGSG 539 >UniRef50_A7IK90 DEAD/DEAH box helicase domain protein n=36 Tax=Alphaproteobacteria RepID=A7IK90_XANP2 Length = 559 Score = 585 bits (1509), Expect = e-165, Method: Composition-based stats. Identities = 208/450 (46%), Positives = 277/450 (61%), Gaps = 10/450 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF +LGL+ I+RA+ E + PTPIQ +AIP +L GRDL+ AQTGTGKTA F LP+L Sbjct: 38 SFSNLGLAEPIVRALTEAQHVTPTPIQAEAIPQILAGRDLIGIAQTGTGKTAAFALPILD 97 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L+ R PH + VRAL+L+PTREL+ QI EN + ++ NI + GGV + Q+ Sbjct: 98 RLV-RHPHRPEPKSVRALVLSPTRELSGQIVENFEKFGRHANISVSLAIGGVPMGRQIRA 156 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GVDVLVATPGRL+DL +AVKLDQVE+LVLDEAD+MLDMGF+H IR ++ +LP KR Sbjct: 157 LSRGVDVLVATPGRLIDLVENHAVKLDQVEVLVLDEADQMLDMGFVHAIRAIVRRLPHKR 216 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 +L FSAT I LA +L +P+ + V +D+V Q V VDK K +LL+ ++ Sbjct: 217 HSLFFSATMPHAIAELAGSMLRDPVRVAVTPVAKTADRVEQRVILVDKANKGQLLAEVLS 276 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + + LVF+RTKHGA+ + L K GI + AIHGNKSQ R R LA F+ G IR L+A Sbjct: 277 TEDIDRALVFSRTKHGADKVVRVLAKAGIAAEAIHGNKSQNQRDRVLAAFREGKIRTLIA 336 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TDIAARG+D+ + HV+N++LPNVPE YVHRIGRT RA G A+S +E LR IE Sbjct: 337 TDIAARGIDVTGVSHVINFDLPNVPESYVHRIGRTARAGREGIAISFCDHEERAFLRSIE 396 Query: 362 KLLKKEIP---------RIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRR 412 KL+K ++P R A+P EP + + G GR G+ + Sbjct: 397 KLIKMQLPSSDRRGAGTRFAVPELEPIILDERDETSERSDYIGRSGRQNPRGQRPRHGDE 456 Query: 413 GEGGAKSASAKPAEKPSRRLGDAKPAGEQQ 442 G +S + + E + +P GE + Sbjct: 457 RSGEGRSRAPRSEEGRPQAARAHQPRGEGR 486 >UniRef50_Q5N7W4 DEAD-box ATP-dependent RNA helicase 30 n=3 Tax=Oryza sativa Japonica Group RepID=RH30_ORYSJ Length = 666 Score = 583 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 151/404 (37%), Positives = 234/404 (57%), Gaps = 4/404 (0%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F ++A+A+ G+ EPTPIQ Q P L+GRD++ AQTG+GKT + LP L H Sbjct: 253 FQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVH 312 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + + +G P+ LIL PTRELA QI + + Y RS ++GG PQ+ L Sbjct: 313 VGAQPRLEQGDGPI-VLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDL 371 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 R GV++++ATPGRL+D+ L +V LVLDEADRMLDMGF IR+++ ++ RQ Sbjct: 372 RRGVEIVIATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQ 431 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMIG 241 L +SAT+ ++++LA + L NP ++ + + A+ + Q + + + K LS ++ Sbjct: 432 TLYWSATWPREVESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLS 491 Query: 242 K-GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + ++L+F +TK + + QL DG + +IHG+K+Q R LA+FKSG ++ Sbjct: 492 DLMDGSRILIFFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMA 551 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD++++ V+N++ P EDY+HRIGRTGRA A+G A + + K R++ Sbjct: 552 ATDVAARGLDVKDIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAKFSRNL 611 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGG 404 K+L++ + P E + + RG GG G G Sbjct: 612 VKILREAGQVVN-PALESMAKSASSMGGGNFRSRGRGGFGNRSG 654 >UniRef50_D2L498 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L498_9DELT Length = 492 Score = 583 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 199/448 (44%), Positives = 271/448 (60%), Gaps = 7/448 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSFDS L I + GY PTPIQ +AIP V EGRDLM AQTGTGKTA F LP++ Sbjct: 1 MSFDSFCLHATITENIKRLGYENPTPIQAEAIPHVTEGRDLMGLAQTGTGKTAAFLLPII 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L+T + +G VRALIL PTRELA QI D + +R+ V++GGV + PQ Sbjct: 61 HRLMTTKSEKRG---VRALILAPTRELAEQIYRAGLDLGRGTRLRAAVIYGGVGMFPQTR 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR GVD++VA PGRLLD +Q V+ D +E LVLDEAD M DMGF+ DI+R+L+ LP++ Sbjct: 118 ALRQGVDIIVACPGRLLDHMNQGNVRFDALETLVLDEADHMFDMGFLPDIKRILSALPSE 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT I LA + L +P+ + + V ++ + +K LL H++ Sbjct: 178 RQTLLFSATMPPAISGLAHETLTDPVTVRIGHM-APLSTVEHAIYPISHTQKAPLLLHLL 236 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + Q V+VFTRTKH A +LA QL + G ++ + GN SQ R A+ F+ G +VLV Sbjct: 237 EEAGKQSVIVFTRTKHRAKNLALQLCRSGHKATCLQGNLSQRQRQIAMDGFRRGSFQVLV 296 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ ++ HVVN+++P+ E Y HRIGRTGRA G+A + V ++ ++R I Sbjct: 297 ATDIAARGIDVSQVGHVVNFDIPDTAEAYTHRIGRTGRAEHEGQAHTFVTGEDMGMVRAI 356 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 E +KK +PR + G+EPDPS + G +G GGR QQ RG+G + Sbjct: 357 ESHMKKPLPRREVEGFEPDPSEFRRSYAPAPRYPARGRQGGYGGRPQQGGYRGQGDRARS 416 Query: 421 SAKPAEKPSRRLGDAKPAGEQQRRRRPR 448 S +P + S +P G++ R R R Sbjct: 417 SDRPQGERSF---SERPQGDRPRDDRAR 441 >UniRef50_C5RIK3 DEAD/DEAH box helicase domain protein n=3 Tax=Clostridia RepID=C5RIK3_CLOCL Length = 536 Score = 583 bits (1504), Expect = e-165, Method: Composition-based stats. Identities = 154/390 (39%), Positives = 235/390 (60%), Gaps = 7/390 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ L L +IL+A+ + G+ EP+PIQ ++IP +EG DL+ AQTGTGKTA F +L Sbjct: 6 TFNELNLKDEILKAINDMGFEEPSPIQSESIPVGIEGYDLIGQAQTGTGKTAAFGSIILN 65 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 ++ ++ RR +ALIL PTRELA Q+ E + +K + + L ++GG I+ Q+ Sbjct: 66 NM------SEKRRVPQALILAPTRELAIQVNEELVRIAKNMRLNILPIYGGQPIDRQLRA 119 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GVD++V TPGR+LD + ++ + V+ LVLDEAD ML+MGFI DI V+ L R Sbjct: 120 LRNGVDIVVGTPGRVLDHLRRKSLNTEFVKFLVLDEADEMLNMGFIDDIEEVMKSLNEDR 179 Query: 182 QNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT D IK L+++ + + I + + + +TQ+ + + + E L +I Sbjct: 180 QTLLFSATMPDAIKRLSKRYMKSDAKLISIEKNTVTASTITQYYYEIKNSDRFESLCRII 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + ++F +TK G + L + + G +HG+ +Q R L FK ++ LV Sbjct: 240 DADEPEAAIIFCKTKKGVDELVSSMQRRGYVVEGMHGDMNQNQRMNTLKKFKESNLDFLV 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+D+E + HV+NY+LP E YVHRIGRTGRA G+A +LV E+ +L+ I Sbjct: 300 ATDVAARGIDVENVTHVINYDLPQDAESYVHRIGRTGRANKEGKAYTLVTPREYIVLKQI 359 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 EK K +I R ++P + +K + + N Sbjct: 360 EKTTKSKIKRNSVPTVDEIYDVKYKNVLNK 389 >UniRef50_Q0ST49 ATP-dependent RNA helicase, DEAD/DEAH box family n=23 Tax=cellular organisms RepID=Q0ST49_CLOPS Length = 528 Score = 582 bits (1503), Expect = e-165, Method: Composition-based stats. Identities = 149/384 (38%), Positives = 223/384 (58%), Gaps = 5/384 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + FD LGL +L+A+ + G+ EP+ IQ ++IP LEG D++ AQTGTGKTA F ++ Sbjct: 4 IKFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAII 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + ++ +ALIL PTRELA Q+ E + K+ + L ++GG I+ Q+ Sbjct: 64 N----NADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIR 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GVD++V TPGR+LDL + ++ L+ + LVLDEAD ML+MGFI D+ ++ L Sbjct: 120 ALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTD 179 Query: 181 RQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ LLFSAT IK LA + + I + + + ++ Q + + + E L + Sbjct: 180 RQTLLFSATMPPQIKKLARNYMKEDTKHIAIKKSSLTVSKIEQFYFEIKHRDRFETLCRV 239 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++F +TK G + + E++ G +HG+ SQ R + L FK G + L Sbjct: 240 LDFDEPNAAIIFCKTKKGVDEVVEKMQARGYMVEGMHGDMSQNHRLQTLRKFKEGSLDFL 299 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+E + HV+NY+LP E YVHRIGRTGRA G A SLV E+ +L+ Sbjct: 300 VATDVAARGIDVESVTHVINYDLPQDNESYVHRIGRTGRANREGVAYSLVTPKEYMMLKQ 359 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIK 383 I+K K +I R A+P + K Sbjct: 360 IQKHTKSKIIRKAVPTVDEIFQNK 383 >UniRef50_B4WCQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WCQ8_9CAUL Length = 510 Score = 582 bits (1501), Expect = e-164, Method: Composition-based stats. Identities = 214/481 (44%), Positives = 299/481 (62%), Gaps = 35/481 (7%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+S+GL+ +L+A+A +GY +PTPIQ++AIP V++G+DL+ AQTGTGKTA F LP+L Sbjct: 17 TFESMGLNKALLQALASEGYTKPTPIQEKAIPDVMQGKDLLGIAQTGTGKTAAFALPILH 76 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L + A R R L+L+PTRELA QIG++ + Y +L R V+FGGV Q Sbjct: 77 RLAENR-IAPKPRTTRVLVLSPTRELATQIGDSFKAYGAHLGFRVAVIFGGVKYGAQERA 135 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G+D+LVA PGRLLD Q + L EILVLDEAD+MLD+GFI IR++++++PAKR Sbjct: 136 LQQGLDILVAAPGRLLDHIQQKNLDLSSTEILVLDEADQMLDLGFIKPIRQIVSRIPAKR 195 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 QNL FSAT +I LA +LL +P++++V ++T +++Q V V++ RKR LL+ M Sbjct: 196 QNLFFSATMPTEIGKLAGELLKDPVKVQVTPQSTTVQRISQSVVHVEQGRKRALLTEMFS 255 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + + LVFT+TKHGA+ +A L G+ + AIHGNKSQ R R L FK G +RVLVA Sbjct: 256 DPEYTRCLVFTKTKHGADKVAAYLEAGGVEAGAIHGNKSQPQRERTLDAFKKGKLRVLVA 315 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TDIAARG+D++ + HVVN+ELP+VPE YVHRIGRT RA A G A+S V DE KLL+DIE Sbjct: 316 TDIAARGIDVDGVSHVVNFELPHVPEAYVHRIGRTARAGADGTAISFVAGDEMKLLKDIE 375 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNG--------------------------RQQRG 395 K+ +++IP I + + A + G R Sbjct: 376 KVTRQKIPAIDRRNDKALGQLDATIMATGVGKKATMPEREGGERNEGGRGGRGRSRVPHR 435 Query: 396 GGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPA-------GEQQRRRRPR 448 G R +GGG+ +Q RR G A+ +P + G+ P+ E + +RRPR Sbjct: 436 DGVRPEGGGQPHRQ-RRARPGETPAAPRPERAYNPLAGERVPSINDNAKPAEGEMKRRPR 494 Query: 449 K 449 + Sbjct: 495 R 495 >UniRef50_B4SPP3 DEAD/DEAH box helicase domain protein n=16 Tax=cellular organisms RepID=B4SPP3_STRM5 Length = 646 Score = 581 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 165/390 (42%), Positives = 236/390 (60%), Gaps = 7/390 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F LGLS +++AV GY P+PIQ IPA+LEGRD++ AQTGTGKTA F LP+L Sbjct: 9 LQFAQLGLSESVMQAVTAIGYETPSPIQAATIPAMLEGRDVLGQAQTGTGKTAAFALPVL 68 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYS-KYLNIRSLVVFGGVSINPQM 119 ++ +Q +AL+L PTRELA Q+ E + YS K R L V+GG Q+ Sbjct: 69 SNIDLQQIK------PQALVLAPTRELAIQVAEAFQSYSSKIPGFRVLPVYGGQPYGQQL 122 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 LR GV ++V TPGR++D ++ + L +++ LVLDEAD ML MGFI D+ VL KLPA Sbjct: 123 SALRRGVHIVVGTPGRVIDHLDRSTLDLSELKTLVLDEADEMLRMGFIDDVEAVLKKLPA 182 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 KRQ LFSAT I+ +A+ L +P+E+ +A + T S + Q +V K + L+ + Sbjct: 183 KRQVALFSATMPPQIRRIAQTYLQDPVEVTIAAKTTTSANIRQRYWWVSGMHKLDALTRI 242 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + +++F RTK G LA +L G+ +AAI+G+ Q R R +A K G + +L Sbjct: 243 LEVEPFDAMIIFARTKAGTEELASKLQARGLAAAAINGDMQQAQRERTIAMLKEGKLDIL 302 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD+E + HV+NY++P E YVHRIGRTGRA +GEA+ E +LR Sbjct: 303 VATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFATPREKGMLRQ 362 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQN 389 IE+ ++ I + +P E + + Sbjct: 363 IERATRQPIEEMQLPSVEAVNDNRINKFTS 392 >UniRef50_Q0AVQ9 ATP-dependent RNA helicase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AVQ9_SYNWW Length = 530 Score = 581 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 155/388 (39%), Positives = 237/388 (61%), Gaps = 10/388 (2%) Query: 1 MSFD---SLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTL 57 MSF+ S+GL D+L+ + E+G+ +PTPIQ ++IP + G DLM AQTGTGKTA F + Sbjct: 1 MSFENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGI 60 Query: 58 PLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINP 117 P+L +I + ++AL+L PTRELA Q+ E + S+ + I+ L ++GG SI Sbjct: 61 PILNRVIKGE-------GLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIEL 113 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 Q+ LR +++V TPGRL+D ++ + L ++ +VLDEAD MLDMGF+ DI+++L++ Sbjct: 114 QLRSLRRNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQC 173 Query: 178 PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 P +RQ LFSAT D+++ L K + P I + ++ Q+ + V+ +RK E L Sbjct: 174 PRERQTFLFSATLPDEVRELGTKFMKQPEIILIESPERTVPEIEQYYYQVNSRRKIETLC 233 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 +I L+F RTK A+ LA L G + A+HG+ SQ R + F+ G+ + Sbjct: 234 RIIDAQQPPISLIFCRTKRNADELARVLTSRGYNADALHGDMSQRERDHVMHGFRQGNTK 293 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVATD+AARGLDIE + HV N+++P + Y+HR+GRTGRA +G A++LV + +LL Sbjct: 294 ILVATDLAARGLDIELVTHVFNFDIPEDLDSYIHRVGRTGRAGRSGIAITLVEPTQIRLL 353 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAE 385 R IE+ K I R +P + + Sbjct: 354 RMIERHTGKRIERALLPTLAEAVEKRQD 381 >UniRef50_A8SKI7 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SKI7_9FIRM Length = 580 Score = 581 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 139/377 (36%), Positives = 217/377 (57%), Gaps = 6/377 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ LS ++L+AV E G+ EP+PIQ+QAIP +L D++ AQTGTGKTA F +P+++ Sbjct: 4 NFNDFNLSKEVLKAVVEMGFEEPSPIQKQAIPTMLNNEDIIGQAQTGTGKTASFGIPIVE 63 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + K + +A++L PTREL+ Q+ E + +KY + + ++GG I Q+ Sbjct: 64 KVN------KNSKTTQAMVLCPTRELSIQVAEEISKLAKYKGVTVVPIYGGQPIERQIRS 117 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV V+V TPGR++D + +K + ++ VLDEAD M DMGF DI +++ LP +R Sbjct: 118 LKMGVQVIVGTPGRVIDHIKRKTLKTENIKTFVLDEADEMFDMGFREDIEKIIGFLPYER 177 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q FSAT ++ A + P I+V + +VTQ+ + K E+LS ++ Sbjct: 178 QTTFFSATMDHEMMDFAARYQSEPRLIKVVPKELTVPKVTQYYFALKHNMKLEILSRILD 237 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 N + +VF TK + L L G + +HG+ Q R + F++ I +LVA Sbjct: 238 VQNPKLTVVFCNTKKMVDDLTAGLQSRGYFADGLHGDLKQIQRDGVMNKFRNSTIDILVA 297 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARG+D++++ V+NY++P E YVHRIGRT RA G A+S V E L I+ Sbjct: 298 TDVAARGIDVDDVDLVINYDMPQDVEYYVHRIGRTARAGREGTAISFVSPREMNTLSQIQ 357 Query: 362 KLLKKEIPRIAIPGYEP 378 K K +I + +P + Sbjct: 358 KYTKTKIEKRDMPTLKD 374 >UniRef50_C5EJJ1 DEAD/DEAH box helicase domain-containing protein n=7 Tax=cellular organisms RepID=C5EJJ1_9FIRM Length = 572 Score = 581 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 157/388 (40%), Positives = 233/388 (60%), Gaps = 7/388 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + FD L L I+RA+ E G+ E +PIQ QAIP +EGRD++ AQTGTGKTA F +PLL Sbjct: 4 VKFDELQLDERIIRAITEMGFEEASPIQAQAIPVAMEGRDMIGQAQTGTGKTAAFGIPLL 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 Q + + + ++A+IL PTRELA Q+ E +R +K++ + L ++GG I Q+ Sbjct: 64 QKVDPK------VKKLQAIILLPTRELAIQVAEEMRRLAKFMHGTKVLPIYGGQDIVKQI 117 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ G ++V TPGR++D + VK+D V +VLDEAD ML+MGF+ D+ +L++LP Sbjct: 118 RSLKDGTQIVVGTPGRVMDHMRRKTVKMDHVHTVVLDEADEMLNMGFLEDMETILSQLPE 177 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ L+FSAT I +A K +P+ + V ++ +VTQ+ + V K K E++ + Sbjct: 178 ERQTLMFSATMPQAIADIARKFQDDPVTVRVIKKELTVPKVTQYYYEVKPKNKVEVMCRL 237 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + +VF TK + L + L G + +HG+ Q R R + F++G +L Sbjct: 238 LDMYAPKLSIVFCNTKRQVDELVQALQGRGYFAEGLHGDLKQVQRDRVMGSFRNGRTDIL 297 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+ ++ V NY++P E YVHRIGRTGRA G+A SLV E LRD Sbjct: 298 VATDVAARGIDVGDVEAVFNYDVPQDDEYYVHRIGRTGRAGREGKAFSLVVGKEVYKLRD 357 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPI 387 I++ K +I AIP IK E + Sbjct: 358 IQRYCKTKIIPQAIPSLNDITEIKVEKV 385 >UniRef50_D2MPZ3 Putative ATP-dependent RNA helicase RhlE n=1 Tax=Bulleidia extructa W1219 RepID=D2MPZ3_9FIRM Length = 425 Score = 581 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 176/431 (40%), Positives = 265/431 (61%), Gaps = 6/431 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F+ L +L ++A+ Y++P+PIQ++ IP +LEG DL+A AQTGTGKTA F LP+L Sbjct: 1 MTFNEFNLRKPLLDSLAKASYKKPSPIQEKGIPILLEGSDLIACAQTGTGKTATFALPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + H+ +RALILTPTRELA QI EN++ + +Y+++R+ V+GG PQ+ Sbjct: 61 NSLSKEKNHS-----IRALILTPTRELATQIFENIKMFGRYMHLRACCVYGGSPAAPQLK 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +R G D+L+ATPGRLLD + L +E LVLDEADRMLDMGFI D+R+++ ++P Sbjct: 116 AIRSGCDILIATPGRLLDYLAHGKISLRHIEFLVLDEADRMLDMGFIADVRKIVQQIPND 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 R LFSAT +I+ LA +L NP E+ + + + Q++ + +K K+++L +++ Sbjct: 176 RITALFSATMPKEIQELARDILKNPKEVRIEAEKFTASTIDQYLIYTEKSSKKKVLVNLL 235 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + ++ +VFTRTK GA+ L + L + I IHG+K+QG R AL F++ IR+L+ Sbjct: 236 NTESIKKTIVFTRTKIGADRLEKYLKEKEIACLVIHGDKTQGQRLNALQRFRTNQIRILI 295 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+DI+++ HV+N++LP E+YVHRIGRTGRA G ++SLVC +E LL +I Sbjct: 296 ATDVAARGIDIKDISHVINFDLPEDIENYVHRIGRTGRAKQEGVSISLVCKEELNLLANI 355 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 E ++ +IP P K + R R + ++ EG Sbjct: 356 ESYIQFQIPLKQNLYSLPLERKKKRKSSIHKTTR-KKERFSNQKKRSKKKSFHEGLIPQK 414 Query: 421 SAKPAEKPSRR 431 P K R+ Sbjct: 415 GISPKSKQKRK 425 >UniRef50_B6R5V0 ATP-dependent rna helicase, dead/deah box family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R5V0_9RHOB Length = 453 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 201/462 (43%), Positives = 284/462 (61%), Gaps = 21/462 (4%) Query: 1 MS-FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPL 59 M+ FD LG++ A+ +GY EPTPIQ+ AIP +L+G+DL+ AQTGTGKTA F +PL Sbjct: 1 MTDFDKLGVAKPFQIALKSKGYSEPTPIQENAIPYILDGKDLLGLAQTGTGKTAAFAVPL 60 Query: 60 LQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 LQ L+ + A + VR+LILTPTRELA QI +N++ Y+ + + V GGV PQ Sbjct: 61 LQRLLESRYRA-APKSVRSLILTPTRELADQITKNIKAYAGRTKMYTSCVVGGVPFPPQF 119 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ G+DVLVATPGRLLDL +N V D++EI VLDEAD+MLD+GFI ++ + LP Sbjct: 120 HALQRGLDVLVATPGRLLDLHRKNGVSFDELEIFVLDEADQMLDLGFIAELEEIAYLLPK 179 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 KRQ L FSAT +I+ L+E+ L NP+E+ A T + VTQ + ++K K LL + Sbjct: 180 KRQTLFFSATMPREIRDLSERFLTNPVEVSTAPPATTVETVTQQIAHLEKDAKFPLLKEL 239 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + K ++ LVFT TK G+ LA +LN DG+ + AIHG+ SQ R + L FK G ++ L Sbjct: 240 LEKDECERALVFTLTKKGSARLAARLNADGVPAEAIHGDMSQAERQKTLDKFKRGKLKTL 299 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+ ++ HV+N+++PN E+YVHRIGRT RA +G A++ ++ +LR Sbjct: 300 VATDVAARGIDVSDISHVINFDMPNATENYVHRIGRTARAGKSGTAITFCLPEDRGMLRA 359 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKS 419 I+KL+ K+I + G+ PS EP + G R +G G PR+G G K Sbjct: 360 IQKLIGKKIAEMD--GFTFFPS-DREPKSARSNAQVAGKRAKGSG-----PRKGPGNGKF 411 Query: 420 AS----------AKPAEKPSRRLGDAK-PAGEQQRRRRPRKP 450 A + P PS+ +A PAG+ + +KP Sbjct: 412 AQKPKGKPTGKKSPPRRSPSKSSDNASAPAGDTGGYLKRKKP 453 >UniRef50_A6VJ89 DEAD/DEAH box helicase domain protein n=5 Tax=Euryarchaeota RepID=A6VJ89_METM7 Length = 546 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 158/390 (40%), Positives = 236/390 (60%), Gaps = 7/390 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEG-RDLMASAQTGTGKTAGFTLPLL 60 SF +LGLS +I++A+ ++G+ PTPIQ+QAIP ++EG RD++ AQTGTGKTA F +P+L Sbjct: 3 SFKNLGLSDEIIKALEKKGFTNPTPIQEQAIPILIEGKRDVVGQAQTGTGKTAAFGIPIL 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + + R +ALIL PTRELA Q+ E + + V+GG SI+ Q+ Sbjct: 63 ETID------ESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIR 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L+ GV ++V TPGR+LD + +KL+ V +VLDEAD ML+MGFI D+ +L + + Sbjct: 117 ELKRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTE 176 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 ++ LLFSAT D I LA+ + I+V R+ + Q + + + K ELLS +I Sbjct: 177 KRMLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSYYEIHSRDKFELLSRII 236 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 L+F +TK + ++ +L + G + +HG+ +Q R + L FK+ I VLV Sbjct: 237 DVEKEFYGLIFCKTKADVDEISSRLTEKGYAAEGLHGDMTQAQREKTLDKFKARKINVLV 296 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+DI +L HVVNY++P PE YVHRIGRTGRA G A++ V E + + I Sbjct: 297 ATDVAARGIDINDLTHVVNYDIPQNPESYVHRIGRTGRAGKQGYAVTFVEPSEFRKFKYI 356 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 +K+ EI + +P + K I +G Sbjct: 357 QKIANTEIRKEEVPDVKDIIGAKKRKIVSG 386 >UniRef50_Q54CE0 Probable ATP-dependent RNA helicase ddx17 n=2 Tax=Eukaryota RepID=DDX17_DICDI Length = 785 Score = 580 bits (1497), Expect = e-164, Method: Composition-based stats. Identities = 148/374 (39%), Positives = 226/374 (60%), Gaps = 6/374 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F +++ + G+ PTPIQ QA P L+GRD++ A+TG+GKT F LP + Sbjct: 384 MQFTQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSI 443 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + + P+ L+L PTRELA QI E + I + V+GG S + Q+ Sbjct: 444 VHINAQPVLREDDGPI-VLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVA 502 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GV++++ATPGRL+D+ L +V LVLDEADRMLDMGF IR++++++ Sbjct: 503 ALKKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPD 562 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 RQ L+FSAT+ +++ALA L + +++ + TA+ V Q V K+E + Sbjct: 563 RQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEKKERMLSF 622 Query: 240 IGK-GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 +G G ++V+VF T+ G + L L G +S IHGNKSQ R L+ FK+G + + Sbjct: 623 LGSVGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPI 682 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 ++ATD+A+RGLDI+++ +VVNY+ PN E Y+HRIGRT RA A+G + SL+ D +L Sbjct: 683 MIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLLTTDNARLAN 742 Query: 359 DIEKLL---KKEIP 369 ++ K+L K++IP Sbjct: 743 ELIKVLTEAKQKIP 756 >UniRef50_D2QD85 DEAD/DEAH box helicase domain protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QD85_9SPHI Length = 643 Score = 580 bits (1496), Expect = e-164, Method: Composition-based stats. Identities = 150/386 (38%), Positives = 237/386 (61%), Gaps = 7/386 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F SL +SP++L+AV + G+ P+PIQ +AIP +L+GRD++ AQTGTGKTA F +P L Sbjct: 33 FSSLAISPELLQAVTDMGFISPSPIQAEAIPPILDGRDVIGQAQTGTGKTAAFGIPALDL 92 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMK 121 + + R V+ LIL PTRELA Q+ E ++ +KY IR ++GG SI Q+ Sbjct: 93 IDVQ------DRSVQTLILCPTRELALQVAEEIKKLAKYKRGIRIEAIYGGDSIERQIRS 146 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV +++ TPGR++D +N +KL+ V++++LDEAD MLDMGF DI +L ++P +R Sbjct: 147 LKSGVHIVIGTPGRVMDHMERNTLKLNNVKMMILDEADEMLDMGFREDIESILEEMPEER 206 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q +LFSAT S I + +K +P+ ++V ++ + + Q V K K E++ +I Sbjct: 207 QTILFSATMSKPIMQITQKFQKDPVLVKVVKKELTNVNIEQVYFEVKSKAKVEVMCRLID 266 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + + +LVF TK + + E L G ++ +HG+ Q R ++ F++G +LVA Sbjct: 267 MYDLKLLLVFCNTKRKVDEIVEDLQIRGYQAEGLHGDLRQAQRNNVMSKFRAGTTNILVA 326 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARG+D++++ V+N+++P E YVHRIGRTGRA +G A S V DE R+I+ Sbjct: 327 TDVAARGIDVDDVDAVINFDIPLDEEYYVHRIGRTGRAGKSGRAFSFVGRDEKYRFREIQ 386 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPI 387 K ++ + IP +E ++ Sbjct: 387 TYTKVKVEKGVIPSFEDIVGVRKARF 412 >UniRef50_B2V9H9 DEAD/DEAH box helicase domain protein n=4 Tax=Hydrogenothermaceae RepID=B2V9H9_SULSY Length = 405 Score = 580 bits (1496), Expect = e-164, Method: Composition-based stats. Identities = 171/409 (41%), Positives = 260/409 (63%), Gaps = 12/409 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L LS + L+++ E GY +PT IQ++AIPAV+ G+DL+A AQTGTGKTA F +P+++ Sbjct: 7 TFKDLNLSKETLKSLDELGYSKPTEIQEKAIPAVMTGKDLVAQAQTGTGKTAAFGVPIVE 66 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + +Q + V+ALIL PTRELA Q+ + +++ K + +L V+GG SI+ Q+ Sbjct: 67 KVNPKQ------KKVQALILVPTRELAIQVAKEIKELGKNKKVYTLAVYGGKSISHQINF 120 Query: 122 LRGGVDVLV-ATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ G DV+V TPGR+ DL + + LD V++ VLDEADRML+MGFI DI +++ LP Sbjct: 121 LKKGSDVVVVGTPGRVRDLLERGVLNLDNVKMFVLDEADRMLEMGFIDDIEEIMSYLPED 180 Query: 181 RQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQNLLFSAT +I LAE+ L+ N I V +++ Q ++ V+ + K + L+ + Sbjct: 181 RQNLLFSATMPKEILDLAEEFLNENYETIRVKPDEVTVEKIKQIIYRVNPRDKFKKLTEV 240 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + ++V++FT+TK A+ LAE+LN++G ++AIHG+ SQ R L +F++G +++L Sbjct: 241 LSQNEAEKVIIFTQTKIEADELAERLNEEGFNASAIHGDFSQKKRETVLHNFRTGKLKIL 300 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLDI+ + V+NY LP E Y+HRIGRTGRA G A+S++ E K L++ Sbjct: 301 VATDVAARGLDIKGVDLVINYGLPRDAESYIHRIGRTGRAGREGTAISIMTPSEDKQLQN 360 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQ 408 I+K K I I E + ++ Q+ R Q R + Sbjct: 361 IQKKTKANIEVIN----EAQEKKLSSAQKDKSSQKERSSRNQTRRRQRS 405 >UniRef50_C6XMJ7 DEAD/DEAH box helicase domain protein n=23 Tax=Bacteria RepID=C6XMJ7_HIRBI Length = 769 Score = 580 bits (1496), Expect = e-164, Method: Composition-based stats. Identities = 194/376 (51%), Positives = 255/376 (67%), Gaps = 2/376 (0%) Query: 1 MS-FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPL 59 M+ F L+ +L+A+ ++GY PTPIQ QAIP V+EG D++ AQTGTGKTA F LPL Sbjct: 1 MTKFSDFDLASPVLKALDKEGYETPTPIQAQAIPLVMEGGDILGIAQTGTGKTAAFALPL 60 Query: 60 LQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 L HL + P G VR L++ PTRELA+QI E Y + L++R L VFGGV I QM Sbjct: 61 LHHLC-KLPDMPGPGAVRCLVIAPTRELASQIAEAFSKYGQCLSLRVLKVFGGVPIRKQM 119 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L G DVLVATPGRL+DL Q AV L VE LVLDEAD+MLD+GFIH +RR+ +P Sbjct: 120 RDLHRGADVLVATPGRLIDLMEQGAVDLSYVEKLVLDEADQMLDLGFIHPLRRIAAAVPK 179 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ L FSAT ++ LA + L NP ++ +A+ +T +++VTQ + V++ +K LL Sbjct: 180 ERQTLFFSATMPSNVSGLANQFLTNPKKVSIAQESTTAERVTQTMSHVNQAQKGPLLLVN 239 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + + LVFTRTKHGA+ + +L GIR AIHGNKSQ R RAL F++GD +VL Sbjct: 240 LQDESIDRALVFTRTKHGADKVVSKLMNAGIRCGAIHGNKSQAQRERALNAFRNGDSKVL 299 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARG+D+ + HV NYE+PNVPE YVHRIGRT RA G+A+S V DE K L D Sbjct: 300 VATDIAARGIDVPGVSHVFNYEIPNVPEQYVHRIGRTARAGREGKAISFVSRDEKKYLLD 359 Query: 360 IEKLLKKEIPRIAIPG 375 I++ ++ +IP + +P Sbjct: 360 IQRQIRMKIPIVDLPE 375 >UniRef50_C1IBN1 DEAD-box ATP dependent DNA helicase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBN1_9CLOT Length = 526 Score = 579 bits (1495), Expect = e-164, Method: Composition-based stats. Identities = 154/388 (39%), Positives = 234/388 (60%), Gaps = 8/388 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F +LGL +L+++ + G+ +P+ IQ +AIP ++G DL+ AQTGTGKTA F ++ Sbjct: 4 IKFSNLGLKDTLLKSINDLGFEKPSQIQAEAIPVAIQGYDLIGQAQTGTGKTAAFGCGII 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + + A+IL PTRELA Q+ + ++ SKY ++ L V+GG I Q+ Sbjct: 64 NHISKKSGLS-------AIILAPTRELAIQVNDELKRLSKYDDLTILPVYGGDPITNQIR 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ V+++V TPGR+LD + +KLDQ++ LVLDEAD ML+MGFI D+ ++ +LP++ Sbjct: 117 ALKRNVNIVVGTPGRVLDHIKRGTIKLDQIKFLVLDEADEMLNMGFIDDLEDIIKQLPSE 176 Query: 181 RQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ LLFSAT D I+ LA++ + + I + + + ++Q+ V K + E L + Sbjct: 177 RQTLLFSATMPDQIRKLAKRYMKPDAKHISIKKTSMTVSTISQNFFEVSHKTRFEALCRV 236 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++F RTK G + L E + G +HG+ SQ R R L FK G + L Sbjct: 237 LDFDTPSSAIIFCRTKKGVDELVEGMQSRGYVVEGMHGDMSQAHRLRTLKKFKEGSLNYL 296 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+E + HV+NY+LP E YVHRIGRTGRA G A SLV E+ +L+ Sbjct: 297 VATDVAARGIDVEGITHVINYDLPQDVESYVHRIGRTGRANREGIAYSLVSPKEYSMLKQ 356 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPI 387 I+ + K +I R IP + K++ I Sbjct: 357 IKSVTKSDISRKNIPTVNDIFNSKSKSI 384 >UniRef50_B1VFV5 ATP-dependent RNA helicase n=35 Tax=cellular organisms RepID=B1VFV5_CORU7 Length = 778 Score = 579 bits (1494), Expect = e-164, Method: Composition-based stats. Identities = 147/388 (37%), Positives = 229/388 (59%), Gaps = 7/388 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LGLSP++ AV G+ +P+PIQ+Q IP ++ G D++ AQTGTGKTA F LP+L Sbjct: 133 FGDLGLSPEVFDAVRAVGFTKPSPIQEQTIPLLMAGEDVVGLAQTGTGKTAAFALPILSR 192 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMMK 121 L + R +AL+L PTRELA Q+ E+ D+++ + + L ++GG Q+ Sbjct: 193 LNLKS------RKPQALVLAPTRELALQVAESFEDFAEKMGGVNILPIYGGQPYGAQLSG 246 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR G V+V TPGR++D + ++ + ++ +VLDEAD ML+MGF D+ R+L P + Sbjct: 247 LRRGAHVVVGTPGRVIDHLQKGSLDISELRFMVLDEADEMLNMGFQEDVERILEDTPEDK 306 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT I+ L+++ L++P E+ V ++ + Q V + K + L+ ++ Sbjct: 307 QVALFSATMPSAIRHLSKRYLNSPQEVTVKSTQRTAENIEQDYLIVHHREKLDALTRILE 366 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 ++ +++F RTK+ LAE+L G +AAI+G+ +Q R R + K G + +LVA Sbjct: 367 VTDFDAMIMFVRTKNDTEELAERLRARGYEAAAINGDIAQAQRERTVDQLKDGRLDILVA 426 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + HV NY++P E YVHRIGRTGRA +G A+ V E ++L+ IE Sbjct: 427 TDVAARGLDVERITHVFNYDIPRDTESYVHRIGRTGRAGRSGRAVLFVTPRERRMLKSIE 486 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQN 389 + K + I +P + + Sbjct: 487 RATKSRLNEIELPSVDQVNEARKAKFNR 514 >UniRef50_A9NFK0 ATP-dependent RNA helicase, superfamily II n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFK0_ACHLI Length = 448 Score = 578 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 201/371 (54%), Positives = 253/371 (68%), Gaps = 1/371 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L + I +A+ GY PT IQ+QAIP +L G+DL+ SAQTGTGKTA F +P+L Sbjct: 1 MKFSELNIIERIQKALTLSGYEAPTAIQEQAIPILLSGQDLLGSAQTGTGKTAAFAIPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q + + H K R V+ALILTPTRELA QI ENV+ Y+KYLNI S ++GGVS Q Sbjct: 61 QKIYETKEH-KAPRKVQALILTPTRELALQIHENVKIYAKYLNIISTTIYGGVSQKRQEE 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GVDV++ATPGRLLDL +Q + L V LVLDEAD+MLDMGFI D+ ++ K P K Sbjct: 120 ALKRGVDVVIATPGRLLDLMNQKIISLQDVRYLVLDEADQMLDMGFIKDVTSIVDKTPKK 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT I+ L++++L NP I V D +TQ V+ V+K K LL +I Sbjct: 180 RQTMLFSATMPKQIEVLSKQILVNPERIAVTPVTQTLDAITQSVYMVNKANKTLLLIDLI 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 N + VLVFT+TKHGAN L + L GI S IHG+KSQ AR RALA+FK G ++LV Sbjct: 240 YTLNMKSVLVFTKTKHGANKLVKNLMNLGIESEPIHGSKSQAARERALANFKKGKTKILV 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+DIE L +V+N+ELP VPE Y+HRIGRTGRA +G ALSLV E KLL + Sbjct: 300 ATDIAARGIDIEALDYVINFELPEVPETYIHRIGRTGRAGLSGMALSLVDPSEQKLLTQV 359 Query: 361 EKLLKKEIPRI 371 EK + +I + Sbjct: 360 EKHINSKIEAV 370 >UniRef50_A3FQ59 Putative uncharacterized protein n=1 Tax=Cryptosporidium parvum Iowa II RepID=A3FQ59_CRYPV Length = 586 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 157/412 (38%), Positives = 240/412 (58%), Gaps = 7/412 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF + G ++ A+ G+ EPT IQ Q P L G D++ A+TG+GKT GF LP + Sbjct: 169 SFVTSGFPNFLVDALYRTGFTEPTAIQVQGWPVALSGHDMIGIAETGSGKTLGFLLPAMI 228 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + G P+ L+L PTREL QI E + +R+ ++GGV PQ Sbjct: 229 HIRAQPLLRYGDGPI-CLVLAPTRELVEQIREQANQFGSIFKLRNTAIYGGVPKRPQQAS 287 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 +R GV++ +A PGRL+DL + L +V LVLDEADRMLDMGF IR++++++ R Sbjct: 288 IRNGVEICIACPGRLIDLLEEGYTNLSRVTYLVLDEADRMLDMGFEPQIRKLVSQIRPDR 347 Query: 182 QNLLFSATFSDDIKALAEKLLHN-PLEIEVARRN--TASDQVTQHVHFVDKKRKRELLSH 238 Q LL+SAT+ +++ LA L P+ I V + AS + Q+V+ V++ K+ L Sbjct: 348 QTLLWSATWPKEVQKLARDLCKEIPIHINVGSVDALKASHNIKQYVNVVEESEKKAKLKM 407 Query: 239 MIGK---GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295 +G+ + +VL+F TK GA+ L ++L DG + IHG+K Q RT L +F++G Sbjct: 408 FLGQVMVESAPKVLIFCETKRGADILTKELRLDGWPALCIHGDKKQEERTWVLNEFRTGA 467 Query: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK 355 +++ATD+AARGLDI+++ V+N++ PN EDY+HRIGRTGRA ATG +LS D+++ Sbjct: 468 SPIMIATDVAARGLDIKDINFVINFDFPNQIEDYIHRIGRTGRAGATGVSLSFFTPDKYR 527 Query: 356 LLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQ 407 + D+ K+LK+ R+ ++ P K +N +R GG + Sbjct: 528 MASDLIKVLKEAKQRVPPELFKLSPQNKRMHPRNTGFRRNNPNSLPLGGSNR 579 >UniRef50_C5SI45 DEAD/DEAH box helicase domain protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SI45_9CAUL Length = 605 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 197/442 (44%), Positives = 274/442 (61%), Gaps = 1/442 (0%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS +L + ++GY PTPIQ QAIP +L DL+ AQTGTGKTA F LP+L Sbjct: 3 TFKDLGLSASLLSTLEKEGYHTPTPIQAQAIPILLNKHDLLGIAQTGTGKTAAFALPILH 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+++ + R R L+L+PTRELA QI ++ + YSK L ++ +FGGV PQ Sbjct: 63 HILSNR-IIPAPRSCRVLVLSPTRELATQIADSFKAYSKGLGLQIATIFGGVKYGPQYKA 121 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+GG+D+LVATPGRL+D Q + L VE LVLDEAD+MLDMGFI IR+V ++LPA+R Sbjct: 122 LQGGIDILVATPGRLIDHIEQKTIDLKAVEHLVLDEADQMLDMGFIKPIRQVASRLPAQR 181 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 QNL FSAT +I LA +LL NP ++E+ T +++VTQ V F++++RKR LLS + Sbjct: 182 QNLFFSATMPKEIAGLANELLTNPKKVEITPEATTAERVTQQVIFIEQQRKRALLSELYA 241 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + L+FTRTK GA+ +A L G+ +AAIHG+K+Q R RAL FK+G +R LVA Sbjct: 242 DEKLARTLIFTRTKRGADRVAAYLQAGGVEAAAIHGDKNQSQRERALQAFKAGRVRALVA 301 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TDIAARG+D++ + HV+NYELP V E YVHRIGRT RA G +++LV DE KLL+DIE Sbjct: 302 TDIAARGIDVDNVTHVINYELPFVAEAYVHRIGRTARAGKEGHSITLVADDERKLLKDIE 361 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSAS 421 ++ ++ IP + + + +G+ ++ + E K + Sbjct: 362 RITRQRIPSWDRRKDQALKLLDEAILASGQTEKPKTPDRVVEKTARHLDPDAERVHKRSR 421 Query: 422 AKPAEKPSRRLGDAKPAGEQQR 443 +P R G +R Sbjct: 422 NRPNRDERRGNGRDGDNSRGER 443 >UniRef50_A9M0D7 ATP-dependent RNA helicase, putative n=21 Tax=Neisseria RepID=A9M0D7_NEIM0 Length = 457 Score = 577 bits (1489), Expect = e-163, Method: Composition-based stats. Identities = 197/425 (46%), Positives = 266/425 (62%), Gaps = 5/425 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F SLGL +++ A+ QGY PTPIQ AIP L G DL+A+AQTGTGKTA F LP L+ Sbjct: 5 FSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLER 64 Query: 63 L--ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + PVR L+LTPTRELA QI +NV+ Y K L +R V+FGG++++ Q Sbjct: 65 LKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLPLRHTVLFGGMNMDKQTA 124 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR G +++VAT GRLLD Q + L++VEI+VLDEADRMLDMGFI DIR+++ LP + Sbjct: 125 DLRAGCEIVVATVGRLLDHVKQKNIHLNKVEIVVLDEADRMLDMGFIDDIRKIMQMLPRQ 184 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSATFS I+ LA+ ++ P +EVA +NT + V QH+ VD +KR LL +I Sbjct: 185 RQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQNTTNANVEQHIIAVDTIQKRNLLERLI 244 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + QV+VF +TK + + +L + + + AIHG++SQ +R L FK G++RVLV Sbjct: 245 VDLHMNQVIVFCKTKQSVDRVTRELVRRNLSAQAIHGDRSQQSRLETLNAFKDGNLRVLV 304 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARGLDI ELP V+NYE+P PEDYVHRIGRTGRA A G A+SL+ E K+ I Sbjct: 305 ATDIAARGLDIAELPFVINYEMPAQPEDYVHRIGRTGRAGADGVAISLMDESEQKMFESI 364 Query: 361 EKLLKKEIPRIAIPGYEP---DPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 ++L ++ I G+EP + R+ R + ++ R Sbjct: 365 KELTGNKLLIERIEGFEPQWWEQGGAKPEKPEMREPRQRNRYESAKAQREKNTRPENAAN 424 Query: 418 KSASA 422 + +A Sbjct: 425 DAGAA 429 >UniRef50_Q1ECV0 LOC556764 protein (Fragment) n=21 Tax=Eukaryota RepID=Q1ECV0_DANRE Length = 519 Score = 577 bits (1489), Expect = e-163, Method: Composition-based stats. Identities = 135/369 (36%), Positives = 212/369 (57%), Gaps = 5/369 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F ++ + +Q ++EPT IQ Q P L GRD++ AQTG+GKT + LP + Sbjct: 96 NFHQAQFPQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIV 155 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + +G P+ L+L PTRELA Q+ + DY K I+S V+GG PQ+ Sbjct: 156 HINHQPYLERGDGPI-CLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRD 214 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GV++ +ATPGRL+D L + LVLDEADRMLDMGF IR+++ ++ R Sbjct: 215 LERGVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR 274 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMI 240 Q L++SAT+ +++ LAE L + ++I + +A+ + Q V + K L ++ Sbjct: 275 QTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENEKDNKLIQLM 334 Query: 241 GK---GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + + ++F TK + L ++ +DG + IHG+KSQ R L +F+SG Sbjct: 335 EEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAP 394 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +L+ATD+A+RGLD+E++ V+NY+ PN EDYVHRIGRT R+ G A + + Sbjct: 395 ILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQA 454 Query: 358 RDIEKLLKK 366 RD+ ++L++ Sbjct: 455 RDLVRVLEE 463 >UniRef50_A7K2L3 ATP-dependent RNA helicase n=17 Tax=Vibrionaceae RepID=A7K2L3_VIBSE Length = 419 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 201/421 (47%), Positives = 288/421 (68%), Gaps = 4/421 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F LG+ ++ ++ PTP+Q+++IP VLEG++L+A+AQTGTGKTA F LP++ Sbjct: 3 VNFADLGIEQKLIETLSNLNIVTPTPVQEKSIPHVLEGKNLLAAAQTGTGKTAAFGLPII 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q + + K +AL+L PTRELA Q+ +N+ YS +R + V+GG SI Q Sbjct: 63 QTVQQK----KLNGTPQALVLVPTRELAQQVFDNLNQYSAQTELRIVCVYGGTSIGVQKR 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL G D+L+ATPGRLLD V + + +LVLDEADRMLDMGF D++R+ +LPA+ Sbjct: 119 KLEEGADILIATPGRLLDHLFNGNVNISKTSMLVLDEADRMLDMGFWPDLQRIFRRLPAE 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 +Q LLFSATF IK +A KL+ +P+E+EV+ NT ++ V Q V+ VDKKRKRELL+++I Sbjct: 179 KQILLFSATFEKRIKTIAYKLMESPVEVEVSPANTTAETVKQMVYPVDKKRKRELLAYLI 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 G NWQQVLVFT+TK G++ LA++L DGI++ +I+G+KSQGAR RAL +FK G +R L+ Sbjct: 239 GSRNWQQVLVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKQGKVRALI 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI+EL VVN+++P EDYVHRIGRTGRA +G A+SL+ DE LL I Sbjct: 299 ATDVAARGLDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDEEYLLHAI 358 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 E LL + +P+ + G+EP + EP +NG +R + + + + G ++++ Sbjct: 359 ENLLDQRLPQEWLAGFEPTLIEEVEPEKNGSGRRRSRSSEKRKLKAKLAIHKNRGKSRNS 418 Query: 421 S 421 Sbjct: 419 R 419 >UniRef50_B9Y818 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y818_9FIRM Length = 556 Score = 576 bits (1487), Expect = e-163, Method: Composition-based stats. Identities = 155/395 (39%), Positives = 239/395 (60%), Gaps = 6/395 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+ L LSP++ RA+A+ GY E T IQ IP V+ G D++ +QTGTGKTA F +P++ Sbjct: 1 MKFNELNLSPEMSRAIADCGYTEATYIQSACIPVVMNGGDVIGQSQTGTGKTAAFAIPII 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 + L R+ +ALIL+PTRELA Q+ + +R ++KY IR++ V+GG I+ Q+ Sbjct: 61 EML-----EVTDRKRPQALILSPTRELAMQVCDEIRKFTKYKEGIRTVAVYGGQQISKQI 115 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 ++L+ G D++V TPGR+LD + ++ DQ +LVLDEAD ML+MGF DI V+ LP Sbjct: 116 LELKKGADIVVGTPGRVLDHIRRRTLRFDQCRVLVLDEADEMLNMGFREDIETVIEALPQ 175 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ +LFSAT I + + NP+ I+ + + ++ Q + K+ K+E+L + Sbjct: 176 QRQTVLFSATMPKPILEITSQYQTNPVHIKTPQTQINTPKIEQVYYVCPKEAKKEILMQL 235 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I N ++F TK + L L G +AA+HG+ Q RT + +FK G I +L Sbjct: 236 ISMQNPHLAMIFCNTKKMVDELTSDLVSKGYPAAALHGDMKQEMRTGVMDNFKKGKINIL 295 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D++ + V NY+LP E YVHRIGRTGRA G A++L+ + LRD Sbjct: 296 VATDVAARGIDVDSMDVVFNYDLPQESEYYVHRIGRTGRAGKEGLAVTLITARQKYALRD 355 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQR 394 +E+ + ++ + +P E I+ + ++ + R Sbjct: 356 LERTTRSKLTQKPLPSLEEVRKIRLDFLREDLEHR 390 >UniRef50_A2QC74 ATP-dependent RNA helicase dbp2 n=35 Tax=Eukaryota RepID=DBP2_ASPNC Length = 565 Score = 576 bits (1485), Expect = e-163, Method: Composition-based stats. Identities = 149/374 (39%), Positives = 224/374 (59%), Gaps = 8/374 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD G +L V QG+ PT IQ Q P L GRD++ A+TG+GKT + LP + Sbjct: 138 TFDEAGFPQYVLSEVKAQGFDRPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIV 197 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + A G P+ LIL PTRELA QI + + K IR+ V+GGV PQ+ Sbjct: 198 HINAQPLLAPGDGPI-VLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRD 256 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GV+V +ATPGRL+D+ L +V LVLDEADRMLDMGF IR++++++ R Sbjct: 257 LSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDR 316 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMI 240 Q ++SAT+ +++ LA L++ +++ + + +A+ ++TQ V V KR+ + + Sbjct: 317 QTCMWSATWPKEVRQLASDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHL 376 Query: 241 G---KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + + L+FT TK A+ + L +DG + +IHG+K Q R L +FK+G Sbjct: 377 EKIMENRANKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSP 436 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 ++VATD+A+RG+D+ ++ HV+NY+ PN EDYVHRIGRTGRA A G A++ D K Sbjct: 437 IMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNSKQA 496 Query: 358 RDIEKLL---KKEI 368 RD+ +L K++I Sbjct: 497 RDLVTILTEAKQQI 510 >UniRef50_C4LJP9 ATP-dependent RNA helicase n=15 Tax=Bacteria RepID=C4LJP9_CORK4 Length = 823 Score = 575 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 145/377 (38%), Positives = 226/377 (59%), Gaps = 7/377 (1%) Query: 14 RAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGR 73 RAV + G+ P+PIQ IP + +GRD++ AQTGTGKTA F LP+L L + + Sbjct: 167 RAVKKVGFETPSPIQAATIPILAQGRDVVGLAQTGTGKTAAFALPILSRLD------RSQ 220 Query: 74 RPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMMKLRGGVDVLVAT 132 + +AL+L+PTRELA Q+ + ++++ +L + L ++GG S Q+ LR G ++V T Sbjct: 221 KKPQALVLSPTRELALQVADAFQEFADHLGGVHVLPIYGGQSYGIQLSGLRRGAHIVVGT 280 Query: 133 PGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSD 192 PGR++D + ++ L +++ LVLDEAD ML+MGF D+ R+L P +Q LFSAT Sbjct: 281 PGRVIDHLERGSLDLSELKYLVLDEADEMLNMGFQEDVERILADTPEHKQTALFSATMPA 340 Query: 193 DIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFT 252 I+ L+++ L +P E+ + + +D + Q V+ K + L+ ++ + +++F Sbjct: 341 SIRRLSKQYLEDPREVTIKSQQRTADNIHQQYLLVNHHYKLDALTRILEVTEFDAMIMFA 400 Query: 253 RTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIE 312 RTK LAE+L G +AAI+G+ +Q R R + + G + +LVATD+AARGLD+E Sbjct: 401 RTKQNTEELAEKLRARGFSAAAINGDMAQNQRERTVDQLRDGRLDILVATDVAARGLDVE 460 Query: 313 ELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIA 372 + HVVNY++P+ E YVHRIGRTGRA +GEA+ V E +LLR IE+ K I + Sbjct: 461 RISHVVNYDIPHDTESYVHRIGRTGRAGRSGEAILFVTPRERRLLRSIERATKSSIEEMQ 520 Query: 373 IPGYEPDPSIKAEPIQN 389 +P + + Sbjct: 521 LPTVDEVNETRKAKFAQ 537 >UniRef50_Q12QV2 DEAD/DEAH box helicase-like protein n=27 Tax=Gammaproteobacteria RepID=Q12QV2_SHEDO Length = 433 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 221/429 (51%), Positives = 290/429 (67%), Gaps = 7/429 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+S +P+ILRA+AE GY+ TP+QQQAIPA+ G D++ASAQTGTGKTA F LP+L Sbjct: 1 MKFESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q + +P RALILTPTRELAAQ+ +N+ YSK++NI L ++GG+ + Q Sbjct: 61 QKM-HERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQ 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL+ G D++VATPGRLL+ + L VE LVLDEADRMLDMGF DI+++L + K Sbjct: 120 KLKQGADIIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLDMGFSTDIQKILQAVNKK 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSATFS +K LA +L P I ++NT + V+Q V+ V+++RKRELLS +I Sbjct: 180 RQNLLFSATFSTAVKKLANDMLDKPKIISADKQNTTAATVSQVVYPVEQRRKRELLSELI 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 G NWQQVLVFT T+ A+ L +LN DGI SA +HG K+QG+R RAL +F G +RVLV Sbjct: 240 GTKNWQQVLVFTATRADADKLVTELNLDGIPSAVVHGEKAQGSRRRALREFIEGKVRVLV 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 AT++AARGLDI+ L +VVNY+LP + EDYVHRIGRTGRA TG A+S V +E + L DI Sbjct: 300 ATEVAARGLDIQGLEYVVNYDLPFLAEDYVHRIGRTGRAGKTGVAISFVSREEERTLADI 359 Query: 361 EKLLKKEIPRIAIPGYEPDPS------IKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE 414 EKL+ ++I RI +PGYE I+ +Q+R Q G Q RR + Sbjct: 360 EKLIGQKIRRITVPGYEVSSRELLLKTIEKRRSFGKKQERNDNVGAQVVGEKNMQGRRVK 419 Query: 415 GGAKSASAK 423 G +++ K Sbjct: 420 VGKPTSTVK 428 >UniRef50_Q3AZR1 DEAD/DEAH box helicase-like n=2 Tax=Synechococcus RepID=Q3AZR1_SYNS9 Length = 458 Score = 574 bits (1481), Expect = e-162, Method: Composition-based stats. Identities = 228/447 (51%), Positives = 308/447 (68%), Gaps = 13/447 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+ L L + +R++ E GY PTPIQ IP VL+G+D+MASAQTGTGKTA F LP++ Sbjct: 24 LTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPII 83 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L R V +L+LTPTRELAAQ+ + + Y+KYL +RS VFGGVSI PQ+ Sbjct: 84 ELLRAED--KPKRYQVHSLVLTPTRELAAQVEASAKAYTKYLALRSDAVFGGVSIRPQVK 141 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L+GGVD+LVATPGRLLDL +Q ++ D +++LVLDEADRMLDMGFI DI++V+ LP Sbjct: 142 RLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIKKVIEYLPKN 201 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQN++FSATFS IK LA LL++P+EI+ + +N A+ + VH D RK +LL H+I Sbjct: 202 RQNMMFSATFSTPIKKLALGLLNDPVEIKASVQNQAAPTIEHLVHPCDMARKVDLLCHLI 261 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 W+QVLVF RTKHGA+ + + L +R++AIHGNKSQGARTRAL FK+GDI++LV Sbjct: 262 KTNKWKQVLVFARTKHGADKVVKILCHQHMRASAIHGNKSQGARTRALEGFKNGDIKILV 321 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+DI +LP+V+N +LPNV EDYVHRIGRTGRA G A+SLV +E LL+ I Sbjct: 322 ATDIAARGIDIHQLPYVINLDLPNVAEDYVHRIGRTGRAGEAGHAISLVAAEEALLLKAI 381 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA-KS 419 EK + +P++ + G+E +KAEP++ G GQ R Q R G+ Sbjct: 382 EKFIGNPLPKVDVVGFEQK-ILKAEPLKQG---------GQRQRRPSQSARPGQKAKTNH 431 Query: 420 ASAKPAEKPSRRLGDAKPAGEQQRRRR 446 AS++ R+ + GE++ R+R Sbjct: 432 ASSQQRRSDWRKSSNRSTQGERRTRQR 458 >UniRef50_C8WFI7 DEAD/DEAH box helicase domain protein n=3 Tax=Zymomonas mobilis RepID=C8WFI7_ZYMMN Length = 506 Score = 574 bits (1481), Expect = e-162, Method: Composition-based stats. Identities = 195/455 (42%), Positives = 259/455 (56%), Gaps = 10/455 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF LGLS ++L+AVAE GY EPTP+Q AIP+VL RDL+A AQTGTGKTA F LP++ Sbjct: 15 MSFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMI 74 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + A R R+LIL PTRELAAQ+ EN Y KY + ++ GGV + Q Sbjct: 75 DILAHGRCRA---RMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQA 131 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GVDVL+ATPGRLLDL + + L E+LV+DEADRMLDMGFI DI + TKLP Sbjct: 132 ALEKGVDVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLDMGFIPDIETICTKLPTS 191 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT IK LA++ L NP +IE++R TA+ + Q + V + K++ L M+ Sbjct: 192 RQTLLFSATMPPAIKKLADRFLSNPKQIEISRPATANTLIDQRLIEVSPRSKKKKLCDML 251 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++F K LA L + G IHG+ SQ R L FK+G I VLV Sbjct: 252 RAEKDHTAIIFCNRKTTVRQLATTLEQQGFSVGQIHGDMSQPERGSELERFKNGQISVLV 311 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 A+DIAARGLD++ + HV N+++P P+DY+HRIGRTGR A+GEAL+ V + + + I Sbjct: 312 ASDIAARGLDVKGISHVFNFDVPTHPDDYIHRIGRTGRGGASGEALTFVTPADEEAITAI 371 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 EKL+ EIPR+ + A P ++ + PR+ ++ Sbjct: 372 EKLMGVEIPRL------GNRKKNAYPSKSEETVSPKQAKPVQEKSAASSPRKAPRKTETP 425 Query: 421 SAKPAEKPSRRLGD-AKPAGEQQRRRRPRKPAAAQ 454 P ++ D K + RP A Q Sbjct: 426 KKLPEDRLDSVESDFPKNQAPRNTASRPVSKARTQ 460 >UniRef50_A5UZK3 DEAD/DEAH box helicase domain protein n=8 Tax=Bacteria RepID=A5UZK3_ROSS1 Length = 467 Score = 574 bits (1481), Expect = e-162, Method: Composition-based stats. Identities = 183/449 (40%), Positives = 263/449 (58%), Gaps = 7/449 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSFDS P I + + GY PTPIQ+Q IP L+GRD++ AQTGTGKTA F LP+L Sbjct: 1 MSFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L+ R VRA+I+TPTRELA QI + KY +RS+ ++GGV Q+ Sbjct: 61 QRLMRGP-----RGRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQ 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +LR GV++ V PGRLLD + + L+ +++L+LDEAD+M DMGF+ D+RR+L PA+ Sbjct: 116 RLRRGVEIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDVRRILRLAPAQ 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT D I+ALA + L P I++ R + VT ++ V + K LL ++ Sbjct: 176 RQTMLFSATMPDAIRALAREALREPQTIQIGR-SAPVSTVTHAIYPVAEHLKTALLIELL 234 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + VL+FTRTKH A HL++ L + G R+ A+ GN SQ R AL F+SG ++LV Sbjct: 235 RHTDTGSVLIFTRTKHRAQHLSDTLARMGYRATALQGNMSQNRRQAALDGFRSGRYQILV 294 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ + HV+NY++P E Y HRIGRTGRAA TG+A +LV + ++R I Sbjct: 295 ATDIAARGIDVAHISHVINYDMPQTAEAYTHRIGRTGRAARTGDAFTLVTRSDTGMVRAI 354 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGR-QQRGGGGRGQGGGRGQQQPRRGEGGAKS 419 E+L+ + + R +PG++ + A ++ + R ++ R + Sbjct: 355 ERLIGEPLKRETVPGFDYHAAAPAHDARSDHAPRHHAMPRHYEPHSQDERDNRAPRRHDA 414 Query: 420 ASAKPAEKPSRRLGDAKPAGEQQRRRRPR 448 + P RR + R +PR Sbjct: 415 QERRSDTAPRRRDVQEWRSDAAPNRHKPR 443 >UniRef50_Q485D3 ATP-dependent RNA helicase, DEAD box family n=24 Tax=Gammaproteobacteria RepID=Q485D3_COLP3 Length = 455 Score = 574 bits (1481), Expect = e-162, Method: Composition-based stats. Identities = 216/450 (48%), Positives = 297/450 (66%), Gaps = 17/450 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MS DS+GLS D+L+AV GY+ TPIQQ+AIP + +G DL+ASAQTGTGKTA F+LP+L Sbjct: 1 MSVDSIGLSADLLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPIL 60 Query: 61 QHL----------------ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNI 104 + + + + + +RALILTPTRELA Q+ +N++ +S+YL I Sbjct: 61 DAIAKANHAAKSSTTSTDENSAEEKSASGQAIRALILTPTRELANQVADNIKQFSQYLPI 120 Query: 105 RSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDM 164 +S VV+GG + Q L+ G+DVLVATPGRLL+ V L QV+ LVLDEADRMLDM Sbjct: 121 KSGVVYGGGKMASQTKMLKQGLDVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRMLDM 180 Query: 165 GFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHV 224 GF+ DI ++L + K Q L+FSATFSD +K+LA +LL +P I V++ NT S ++ Q V Sbjct: 181 GFLTDIEKLLLAVKHKHQTLMFSATFSDRVKSLANQLLKSPKTISVSKENTTSGKIKQAV 240 Query: 225 HFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGAR 284 ++V ++RKRELLS +IG NWQQVLVF TK AN LA++L DGI++A HG+K+QGAR Sbjct: 241 YWVTEERKRELLSELIGVNNWQQVLVFAGTKESANTLAKELKLDGIKAALCHGDKTQGAR 300 Query: 285 TRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGE 344 +AL F G +RVLVATD+AARGLDI +L VVN+ LP +PEDYVHR+GRTGRA +G Sbjct: 301 NKALEQFSEGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVGRTGRAGKSGT 360 Query: 345 ALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGG 404 A+SLV + + L +IE+L++++ RI PGYE + ++A Q +R R + Sbjct: 361 AISLVSPKDERFLENIEQLIERKFERIVAPGYEFN-RLEASEYQEATVKRDSKNRYRAAQ 419 Query: 405 RGQQQPRRGEGGAKSASAKPAEKPSRRLGD 434 Q + + KS S + + + + Sbjct: 420 EKNQNLAKKDVKIKSLSKNKTARTNSKYNN 449 >UniRef50_B5EAF1 DEAD/DEAH box helicase domain protein n=3 Tax=Deltaproteobacteria RepID=B5EAF1_GEOBB Length = 471 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 191/475 (40%), Positives = 271/475 (57%), Gaps = 36/475 (7%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L P + + GY PTPIQ QAIP+V+ G+D++ AQTGTGKTA F LP+L Sbjct: 1 MDFKQFNLHPKVQAGIEAMGYVTPTPIQLQAIPSVISGQDVLGLAQTGTGKTAAFGLPML 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L+ + R VR L+L PTRELA QI + + K +RS+ V+GGV+IN Q+ Sbjct: 61 HRLVQEE-----RGHVRGLVLAPTRELAEQINDALNGMGKQTRLRSVTVYGGVNINTQIK 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL+ G +++VA PGRLLD Q + L +VEILVLDEAD+M DMGF+ D+R++L LP K Sbjct: 116 KLKEGAEIVVACPGRLLDHISQGTIDLSRVEILVLDEADQMFDMGFLPDVRKILRALPGK 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNL+FSAT DDI+ LA ++L NP+ ++V+R A+ V+ ++ V + K LL M+ Sbjct: 176 RQNLMFSATMPDDIRRLAHEILRNPVTVQVSRTAPAA-TVSHALYPVGQHLKTPLLFEML 234 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + VL+FT+TKH A + EQL K G ++ ++ GN SQ R AL F+ G +++V Sbjct: 235 KHTDTESVLIFTKTKHRAKRVGEQLEKAGYKATSLQGNLSQNRRQAALDGFRDGTFQIMV 294 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ + HV+NY++P+ PE Y HRIGRTGRAA TG+A ++V ++ +R I Sbjct: 295 ATDIAARGIDVSLISHVINYDIPDTPEAYTHRIGRTGRAAKTGDAFTMVTSEDDYTVRSI 354 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQR-------------------------- 394 EK+L +I R I G++ + + R R Sbjct: 355 EKVLGTKIERRRIEGFDYAVPAPQKDTEFARPPREPQRRRDGAKPGAGRPAAAGPAGAKP 414 Query: 395 ----GGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRR 445 G G GR + ++ PA K + G +PA RR Sbjct: 415 ASAVGAKGNAAASGRPAAHGSKDGSADGGHASGPAGKHRQHPGGNRPANHAARRS 469 >UniRef50_C5CGQ2 DEAD/DEAH box helicase domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGQ2_KOSOT Length = 524 Score = 573 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 156/388 (40%), Positives = 226/388 (58%), Gaps = 7/388 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F +GLS +L ++ + G+ EPTPIQ +AIP +L GRD++ A TGTGKTA F +PLL Sbjct: 3 MNFSEMGLSRKMLNSIEKVGFVEPTPIQSKAIPVILNGRDIIGQAHTGTGKTAAFGIPLL 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 + L + V+ALIL PTRELA Q+ + + I L ++GG SI Q+ Sbjct: 63 EMLDY------SSKKVQALILCPTRELAVQVAREIAALASNRKEIEVLAIYGGQSIERQI 116 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ G+ V+V TPGR++D + +KLD + +VLDEAD ML+MGF+ DIR +L+ + Sbjct: 117 NTLKKGIQVVVGTPGRIMDHMRRKTLKLDDTKFVVLDEADEMLNMGFLEDIRYILSHVGK 176 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ +FSAT I ALA++ P I+V R V Q+ + + RK + LS + Sbjct: 177 ERQITMFSATMPKAIIALAQEFQKEPELIKVINRELTVSTVEQYYLEIGESRKFDALSKL 236 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I N Q LVF TK + L L G +HG+ SQ R R + F++ I+VL Sbjct: 237 IEYYNPQLSLVFCNTKKKVDELVPMLQAKGYLVDGLHGDMSQSLRNRVMNSFRNKSIKVL 296 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D++++ V NY++P E YVHRIGRTGRA TG+A S LR+ Sbjct: 297 VATDVAARGIDVDDIEAVFNYDIPQDEEYYVHRIGRTGRAGKTGKAFSFAYGRSLHRLRE 356 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPI 387 I++ K +I + +P + + + E Sbjct: 357 IQRYTKIKIKSLNVPSEKDVNTKRMESF 384 >UniRef50_Q2BP56 Putative ATP-dependent RNA helicase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BP56_9GAMM Length = 427 Score = 573 bits (1478), Expect = e-162, Method: Composition-based stats. Identities = 199/394 (50%), Positives = 268/394 (68%), Gaps = 2/394 (0%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF L L P++ + GY +PTPIQ QAIP VL G DL+A AQTGTGKTA F LP+++ Sbjct: 5 SFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIE 64 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L G RPVRAL+L PTRELA Q+ +N +Y + L +R + V+GGV + Q+ + Sbjct: 65 KLSKNP--IDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKR 122 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G D+LVATPGRLLDL Q A+ L+++E LVLDEADRMLD+GFI I++++ R Sbjct: 123 LKRGTDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDYAADDR 182 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLF+AT + ++ LAE L+NP +I+V RN+ + Q+ Q + VD +K ++LS++I Sbjct: 183 QTLLFTATADESVEVLAEFYLNNPTKIKVTPRNSTAKQIRQFAYQVDYGQKADILSYLIT 242 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 +G W Q LVF RTK + L + L K+GI +AAIHG KSQ R R L +F +GD+ VLVA Sbjct: 243 EGKWGQTLVFVRTKKRVDELTQYLCKEGINAAAIHGEKSQRERVRMLNEFIAGDLHVLVA 302 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLDIE LP+VVNY+LPN PE YVHRIGRTGRA TGEA+SLV E + L+ IE Sbjct: 303 TDVAARGLDIESLPYVVNYDLPNQPEAYVHRIGRTGRAGETGEAVSLVAPAEREFLQRIE 362 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRG 395 KL+K++I +P E ++ + + +R Sbjct: 363 KLIKQKIKLRPVPRIEDGKRLEIDDFADKPMKRK 396 >UniRef50_D2NRF7 Superfamily II DNA and RNA helicase n=3 Tax=Bacteria RepID=D2NRF7_9MICC Length = 732 Score = 573 bits (1478), Expect = e-162, Method: Composition-based stats. Identities = 151/391 (38%), Positives = 227/391 (58%), Gaps = 1/391 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F LGL +L A+ E GY +P+PIQ+Q IP +LEG D++ AQTGTGKTA F LP L Sbjct: 61 VRFTDLGLDARVLAALEEVGYEKPSPIQEQTIPLLLEGHDVVGLAQTGTGKTAAFALPAL 120 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 + R + L+L PTRELA Q+ E Y+ ++ + L ++GG PQ+ Sbjct: 121 SRMAELADINGVSRDTQVLVLAPTRELALQVAEAFSSYATHMEDFTVLPIYGGSPYGPQL 180 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 LR G V+V TPGR++D + ++ L ++ LVLDEAD ML MGF D+ ++L P Sbjct: 181 AGLRRGAQVVVGTPGRVIDHLEKGSLDLSNLQYLVLDEADEMLRMGFAEDVEKILEGTPD 240 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +Q LFSAT + I+ +A++ L++P E+ V + T S ++Q V K + ++ + Sbjct: 241 SKQVALFSATMPNSIRKIAQQYLNDPREVRVKAKTTTSSNISQRYMQVMHSHKLDAMTRV 300 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + N+ ++VF RTK +A++L G +AAI+G+ Q R R + + G I +L Sbjct: 301 LEVENYDGIIVFVRTKKETEEVADKLKARGFAAAAINGDIPQQLRERTVDALRDGRIDIL 360 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD+E + VVNY++P+ E YVHRIGRTGRA G A+ V E +LR Sbjct: 361 VATDVAARGLDVERISLVVNYDIPHDTESYVHRIGRTGRAGREGAAILFVTPREKYMLRQ 420 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 IEK ++++ + +P E + + Sbjct: 421 IEKATRQKVEPMHMPTAEAVNETRKQRFAQQ 451 >UniRef50_Q5CQW8 Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+HELICc) n=4 Tax=Apicomplexa RepID=Q5CQW8_CRYPV Length = 702 Score = 572 bits (1477), Expect = e-162, Method: Composition-based stats. Identities = 170/470 (36%), Positives = 245/470 (52%), Gaps = 23/470 (4%) Query: 2 SFDSL-GLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 SF L G+ +L + Y PTP+Q+ +IP VL GRDLMA AQTG+GKTA F P++ Sbjct: 201 SFMELEGIHEILLDNIRRVKYERPTPVQKFSIPTVLNGRDLMACAQTGSGKTAAFLFPIV 260 Query: 61 QHLITRQPHAKGRRP---------VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFG 111 ++ P ++ AL+L+PTRELA Q E R + IR+ V++G Sbjct: 261 MKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPTRELAIQTYEESRKFCFGTGIRTNVLYG 320 Query: 112 GVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIR 171 G + Q+M L G D++VATPGRL DL + V L ++ L+LDEADRMLDMGF IR Sbjct: 321 GSEVRSQIMDLDRGSDIIVATPGRLRDLIDRGKVNLKLIKFLILDEADRMLDMGFAPQIR 380 Query: 172 RVL--TKLPAK---RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHF 226 ++ +++P RQ ++FSATF +I+ LA+ LHN + + V R S + Q V + Sbjct: 381 EIVEDSEMPHSLDGRQTVMFSATFPREIQQLAKDFLHNYIFLTVGRVGATSGSIVQRVVY 440 Query: 227 VDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTR 286 ++ K LL ++ + +VF K A+ + + L + +IHG++SQ R Sbjct: 441 AEEDHKPRLLVKLLLEQGEGLTVVFVEMKRRADQIEDFLIDQNFPAVSIHGDRSQQEREH 500 Query: 287 ALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEAL 346 AL F+SG +LVATD+AARGLDI + HV+N ++P +DYVHRIGRTGRA TG A Sbjct: 501 ALRLFRSGQRPILVATDVAARGLDIPNITHVINLDMPCNIDDYVHRIGRTGRAGNTGLAT 560 Query: 347 SLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQN--GRQQRGGGGRGQGGG 404 S V +LRD+ L++ ++ R +GG Q G Sbjct: 561 SFVNESNKPILRDLLAALEESGQDAP-EWFQDMVKSCTASFGRYGNRFNKGGVSSSQRGN 619 Query: 405 RGQQ-----QPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRK 449 RG R +GG+ +S + S + G + R RK Sbjct: 620 RGLHSFGSVDIRSNQGGSNCSSVNSSYGYSGNNSSSGNQGSNNEQWRNRK 669 >UniRef50_Q2NEZ7 Predicted helicase n=20 Tax=cellular organisms RepID=Q2NEZ7_METST Length = 583 Score = 572 bits (1476), Expect = e-162, Method: Composition-based stats. Identities = 157/386 (40%), Positives = 231/386 (59%), Gaps = 7/386 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F L +SP+I +AVA+ G+ E +PIQ AIP +L +D+ AQTGTGKTA F +PLL Sbjct: 4 LKFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLL 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 +++ + ++A+IL PTRELA Q+ E +R S YL I L V+GG I+ Q+ Sbjct: 64 ENIDSE------DNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQI 117 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ GV +++ TPGR++D + + L+ ++ ++LDEAD MLDMGF DI +L +P Sbjct: 118 KALQKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFREDIEYILEDIPY 177 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ LLFSAT +I LA++ NP ++V + + V Q V + K ELLS + Sbjct: 178 ERQFLLFSATLPQEILQLAQRYQTNPEIVKVTKHELTTPDVEQKYFEVKEDMKLELLSRL 237 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++ LVF TK + L L G + +HG+ +Q R R ++ FK G+I +L Sbjct: 238 LDLHDFDLSLVFCNTKRKVDKLVSHLQIRGYLADGLHGDLTQNQRDRVMSKFKKGNIEIL 297 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+ + V N+++PN E YVHRIGRTGRA TG+A S V E LRD Sbjct: 298 VATDVAARGIDVGGVEAVFNFDIPNDNEYYVHRIGRTGRAGKTGKAYSFVSGREIYQLRD 357 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAE 385 I++ K +I + IP +K + Sbjct: 358 IQRYAKTKIEQAPIPALSDVEEVKKD 383 >UniRef50_C8P265 DEAD/DEAH family ATP-dependent RNA helicase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P265_ERYRH Length = 594 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 157/415 (37%), Positives = 233/415 (56%), Gaps = 6/415 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F L L +I+RAV E+GY EPT IQ QAIP +L DL+A +QTGTGKTA F LP+L Sbjct: 17 MTFKELELEEEIVRAVTEKGYEEPTDIQSQAIPILLGNHDLLAQSQTGTGKTAAFGLPML 76 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 ++ +LIL PTREL Q+ E +R +SKY + V+GG I+ Q+ Sbjct: 77 S-----LTQPGDKKRTNSLILCPTRELCMQVAEEMRSFSKYKQGVNIACVYGGSPIDKQI 131 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ G D++VATPGRL+D + ++LD +VLDEAD ML+MGFI DI + + LP Sbjct: 132 RDLKRGADIVVATPGRLMDHIRRKTIRLDDCRHIVLDEADEMLNMGFIEDIEEIFSFLPE 191 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ FSAT +I L+EK L P I ++R N ++ Q + V+ + K +L + Sbjct: 192 ERQFAFFSATMPKEIVKLSEKFLVEPERITLSRNNLTVSRIKQIYYTVESRDKVDLTIQL 251 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++F TK + L QLNK G + +HG+ Q R+ ++ FK G + VL Sbjct: 252 LQLHKTSGTMIFCNTKKMVDELTTQLNKAGFPALGLHGDMKQEMRSMVMSRFKKGMVSVL 311 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 +ATD+AARG+D++ + V+NY++P E YVHRIGRTGRA G A++LV + ++ Sbjct: 312 IATDVAARGIDVDSMDVVINYDIPQELEYYVHRIGRTGRAGKEGLAITLVSRRQRYAIKQ 371 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE 414 IE+L I +P E + + + ++ +G+ + R Sbjct: 372 IERLSNSTIVETPLPTKEQLNDLMVDQLAREIRKWNDHEQGKLFNIAYEGLRNEN 426 >UniRef50_C7JBN9 DNA/RNA helicase n=19 Tax=cellular organisms RepID=C7JBN9_ACEP3 Length = 636 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 190/437 (43%), Positives = 260/437 (59%), Gaps = 3/437 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F L LS ILRA+++ GY PTPIQ+QAIPA+L RD+M AQTGTGKTA FTLP+L Sbjct: 155 VTFADLELSEPILRAISDMGYTHPTPIQEQAIPAILMARDVMGVAQTGTGKTASFTLPML 214 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L + A R R+LIL PTRELA Q+ EN +Y KYL + ++ GG S+ Q Sbjct: 215 EILSDSRARA---RMPRSLILEPTRELALQVAENFVNYGKYLKLNHALLIGGESMADQKE 271 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GVDVL+ATPGRLLDL + + L+ ILV+DEADRMLDMGFI DI +++ LP Sbjct: 272 VLNRGVDVLIATPGRLLDLFERGGLMLNHTGILVIDEADRMLDMGFIPDIEKIVGLLPPN 331 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT + I+ LA+ LH+P EI VAR+++ + +T + VD+ KRE L ++ Sbjct: 332 RQTLLFSATMAPTIRKLADAFLHSPKEITVARQSSVATTITTGIVVVDEYSKRETLRQLL 391 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 Q +VF K + L + L K G +AA+HG+ Q R L FK+ +++VLV Sbjct: 392 KDPALQNAIVFCNRKRDVDILTKSLVKHGFSAAALHGDLPQSVRFSTLEKFKNDELKVLV 451 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 +D+AARG+DI L HV N++LP EDYVHRIGRTGRA G A S+ + L I Sbjct: 452 CSDVAARGIDIGGLSHVFNFDLPFHAEDYVHRIGRTGRAGREGHAYSIATPYDKALAEAI 511 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 EKL KEIPR+A+ G + + GR ++ + + + Sbjct: 512 EKLTGKEIPRMALDGVKQLEWSDEKRPPAGRTRKPRTPQRERENAVPTPREQQPEAKPQQ 571 Query: 421 SAKPAEKPSRRLGDAKP 437 +A+P +P+R + Sbjct: 572 TARPERQPTRNTRHQRD 588 >UniRef50_B3QTY3 DEAD/DEAH box helicase domain protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QTY3_CHLT3 Length = 431 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 207/430 (48%), Positives = 280/430 (65%), Gaps = 3/430 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+S+ L+P ILRA+ E GY PT IQ AIP + G+D++A+AQTGTGKTA F LP+L Sbjct: 4 INFESISLNPSILRALKELGYETPTAIQAAAIPEAILGKDILATAQTGTGKTAAFALPIL 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + + R RALILTPTRELA QI N+R Y++YL +R+ V+ GGV +PQ+ Sbjct: 64 HRLGENRSYD--IRAPRALILTPTRELALQIDNNIRLYARYLRLRTGVIMGGVPAHPQIK 121 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR D+LVATPGRL+DL Q + LDQ++ VLDEADRMLDMGFI DIRR+ + P Sbjct: 122 MLRRNPDILVATPGRLIDLFDQGFIGLDQIQTFVLDEADRMLDMGFIDDIRRIESLQPRD 181 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT S +I+ALA ++L P+ IEVA ++ +D +TQ V FV++ KRELL ++ Sbjct: 182 HQTLLFSATLSPEIEALASRMLREPVRIEVAPVSSVADNITQKVLFVEQNNKRELLHNLF 241 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + ++ LVFTRTK ANH+AEQL + GI + AIH +KSQ AR RAL F G I VLV Sbjct: 242 KENDIKRALVFTRTKQRANHVAEQLIRLGISADAIHSSKSQRARQRALMLFDRGKINVLV 301 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D++ + HV+NYELP+ PE+YVHRIGRT RA A+G ALS DE ++L+ I Sbjct: 302 ATDIAARGIDVDGISHVINYELPDDPENYVHRIGRTARAGASGTALSFCDADEVRMLKGI 361 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPI-QNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKS 419 EKL K I + + + G + + + + + + K Sbjct: 362 EKLTKSSIAICDNNPFHSIAVASMHKVAKAGNKPQYFQKKPRRFSNSKSKYSSKYSDRKH 421 Query: 420 ASAKPAEKPS 429 +S K + K + Sbjct: 422 SSGKRSYKSA 431 >UniRef50_Q2NB74 DNA and RNA helicase n=7 Tax=Alphaproteobacteria RepID=Q2NB74_ERYLH Length = 492 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 198/449 (44%), Positives = 272/449 (60%), Gaps = 8/449 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD LGLS +L+A+ +GY EPTPIQ QAIP VLEGRDL+ AQTGTGKTA F LP + Sbjct: 5 TFDQLGLSQPVLQALDMKGYNEPTPIQAQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSID 64 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L + R L+L PTRELA QI ++ +DY ++ + GG S+ K Sbjct: 65 RLREADNQTPFKS-CRMLVLAPTRELAGQIAQSAKDYGAMAGLKVHSIVGGTSVGKDRNK 123 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L G D+LVATPGRLLDL Q A KL+ VEILVLDEAD+MLD+GFIH +R++ +PA+R Sbjct: 124 LHRGTDILVATPGRLLDLIDQKAFKLNAVEILVLDEADQMLDLGFIHALRQINDLVPAER 183 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q L FSAT I+ L K NP+++ V T ++++ Q++ V + K+ L+ ++ Sbjct: 184 QTLFFSATMPKQIQELVGKYCRNPVKVSVTPAATTAERIDQYLFMVQQDEKQALIEMILK 243 Query: 242 K-----GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 G +++LVFTRTKHGA+ + ++L + GI S AIHGNKSQ R RAL +FK Sbjct: 244 GRHAVPGKQERILVFTRTKHGADRVVKKLRQAGIESNAIHGNKSQPQRQRALDEFKRAKT 303 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 +L+ATD+AARG+DI + HV+NYELPNVPE YVHRIGRT RA G A++ DE Sbjct: 304 PILIATDVAARGIDIPGVSHVINYELPNVPEQYVHRIGRTARAGKDGVAIAFCAEDERAY 363 Query: 357 LRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRG--E 414 L+DI+K E R+ +P P + ++QRG + + R Q R + Sbjct: 364 LKDIQKNTDAEFDRLPLPENFRAVVEGVGPTKREQKQRGPRIKPKPKARKQGGTNRSKPQ 423 Query: 415 GGAKSASAKPAEKPSRRLGDAKPAGEQQR 443 GG ++ P E P ++ G +K ++ Sbjct: 424 GGNPQSAGGPVENPVKKQGTSKQKHPARK 452 >UniRef50_C7MN05 DNA/RNA helicase, superfamily II n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MN05_CRYCD Length = 551 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 190/460 (41%), Positives = 265/460 (57%), Gaps = 20/460 (4%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS L AV GY +PTP+Q+QAIPAVL GRD++A+A+TGTGKTA F+LP + Sbjct: 4 TFHDLGLSEKALAAVDLLGYTDPTPVQEQAIPAVLAGRDVIAAAKTGTGKTAAFSLPTMD 63 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L HA+ + LI+TPTRELA QI R +K R V GGVS NPQ+ Sbjct: 64 RL----GHARHGQGPLLLIVTPTRELALQIESVCRTIAKRSGHRVTCVVGGVSYNPQIDS 119 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR G DVL+ATPGRL+DL +Q+A L+QVE LVLDEADRMLDMGF+ D+RR++ P +R Sbjct: 120 LRRGTDVLIATPGRLIDLMNQDAAHLNQVETLVLDEADRMLDMGFLPDMRRIVAACPTQR 179 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT I+ LL+NP+ +E+A R +D + Q+ VD + K +LL ++ Sbjct: 180 QTLLFSATIDSAIEDNMAHLLNNPVFVEIAHRGETADTIEQYRIPVDHRHKNDLLIALLN 239 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +++VF RT+H + +L K G IH ++SQ R RA+ ++G +LVA Sbjct: 240 ERGGTRIIVFARTRHRVDTCVRKLRKAGFAVEPIHSDRSQNQRKRAIEALEAGKCDILVA 299 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+ ARG+DI + +VVN ++P+ EDYVHRIGRTGRA G A+S V + +LRDI+ Sbjct: 300 TDVLARGIDIPNVNYVVNLDMPDQVEDYVHRIGRTGRAGEAGCAISFVTPENKAILRDIQ 359 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGR----------------QQRGGGGRGQGGGR 405 KL+ K+IP +++ ++ S A + R + R + R Sbjct: 360 KLIGKDIPEMSVESFDSSASDNALAAKATRANAQNDPELATAAREDKSRKKAKSSRSSRR 419 Query: 406 GQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRR 445 + GG + P S R + E +R Sbjct: 420 EHNTEDQRAGGQQRGHKNPRGNKSNRNNSERHFDESERSE 459 >UniRef50_C4Q0V4 DEAD box ATP-dependent RNA helicase, putative n=1 Tax=Schistosoma mansoni RepID=C4Q0V4_SCHMA Length = 769 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 148/427 (34%), Positives = 238/427 (55%), Gaps = 9/427 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF+ L + IL +A+ G++ PTPIQ Q P L GRD++ AQTG+GKTA F LP + Sbjct: 92 LSFNELNVPDYILSVIAKNGWQLPTPIQSQGWPMALSGRDVVGIAQTGSGKTASFLLPAV 151 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H++ + + P+ LIL PTRELA Q+ ++++ ++R++ +GG + Q+ Sbjct: 152 IHIMAQPRLLRNEGPI-CLILVPTRELAQQVLVVAKEFADAASLRAMCFYGGSAKGTQLR 210 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +++ G ++ +ATPGRL+D L +V LVLDEADRMLDMGF IR+++ Sbjct: 211 EMQKGGEICIATPGRLIDFIRVQRNLLSRVTYLVLDEADRMLDMGFEPQIRKIIGHTRPD 270 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNT-ASDQVTQHVHFVDKKRKRELLSHM 239 RQ L++SAT+ +++ LA + L + +++ + + A+ +TQ V +D K + L + Sbjct: 271 RQTLMWSATWPREVQTLAREFLTDYIQVNIGSVSLHANPNITQIVEIMDDWSKEQRLIEL 330 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + LVF TK + L L + G A+HG K Q R LA+FKSG + +L Sbjct: 331 LTSFGRARTLVFVETKRRTDQLTNSLRRRGFYVEAMHGGKQQRDRELTLANFKSGRMNIL 390 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+A+RGLDI+ + +VVN++ PN EDY+HRIGRT R+ TG A + + RD Sbjct: 391 VATDVASRGLDIDNIEYVVNFDFPNQTEDYIHRIGRTARSDKTGTAFTFFTHKNVRQARD 450 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKS 419 + +L + I+ ++ + N ++ + Q+ P R G S Sbjct: 451 LIDILDEANQEISAE------LVQLAGMSNYLRKSSTLKKNPP-AFQQKPPGRITGFGNS 503 Query: 420 ASAKPAE 426 +S+ P + Sbjct: 504 SSSFPTQ 510 >UniRef50_C8WL27 DEAD/DEAH box helicase domain protein n=3 Tax=Eggerthella lenta DSM 2243 RepID=C8WL27_EGGLE Length = 508 Score = 570 bits (1470), Expect = e-161, Method: Composition-based stats. Identities = 188/454 (41%), Positives = 265/454 (58%), Gaps = 8/454 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS L AV GY PTP+Q QAIP VLEGRDL+A+A TGTGKTA F LP+L Sbjct: 3 NFADLGLSEAALAAVERLGYENPTPVQLQAIPLVLEGRDLIAAASTGTGKTAAFLLPILS 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L +G+R R L+++PTRELA QI + ++ VFGG PQ+ + Sbjct: 63 TL---PRGKRGKRAPRVLVVSPTRELAQQISQTCMQITRKTGHYVTTVFGGTPYGPQINE 119 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 +R G DVL+ATPGRL DL ++ V L ++ LVLDEADRMLDMGF+ + ++ PA R Sbjct: 120 IRRGTDVLIATPGRLNDLMNKGVVDLGGIKSLVLDEADRMLDMGFLPAVTTIVDATPADR 179 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT I+ LL++P +E+AR + V Q + + +K ELL ++ Sbjct: 180 QTLLFSATIDHSIQKNLGSLLNDPAVVEIARNGETAQTVEQFMMPIANFKKPELLQALLE 239 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +V+VF RTK+ AE L G R+ +IH +KSQG R RAL +F+ G +LVA Sbjct: 240 EKGSDRVIVFARTKNRTEDCAEALCDAGYRAESIHSDKSQGQRKRALDNFRRGRTSILVA 299 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+ ARG+D+ ++ HV+N++LP++PEDYVHRIGRTGRA G A+S V + + + DIE Sbjct: 300 TDVLARGIDVPDVDHVINFDLPDMPEDYVHRIGRTGRAGEQGFAVSFVTRESRRTMSDIE 359 Query: 362 KLLKKEIPRIAIPGYEPDPSI-----KAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 KL+ K +P + + YE D ++ K P + G + G GR G R ++ Sbjct: 360 KLIGKNVPLMELETYELDMTVLEKGKKGAPKKGGYKGNKGSGRPAGAKRSDKRGGEKRDF 419 Query: 417 AKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKP 450 + + ++ + R G K A ++ KP Sbjct: 420 ERRSDSRAEGRSDNRPGRGKRAEGKRSFDGAAKP 453 >UniRef50_C6C1F3 DEAD/DEAH box helicase domain protein n=2 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1F3_DESAD Length = 493 Score = 569 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 199/462 (43%), Positives = 271/462 (58%), Gaps = 15/462 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF I+ + GY PTPIQ +AIP VL+GRD+M AQTGTGKTA F LP++ Sbjct: 1 MSFKQFSFDRRIMAGIHACGYETPTPIQTKAIPEVLKGRDVMGLAQTGTGKTAAFALPIM 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L+ ++ G+ P+R L+L PTRELA QI EN + IRS VFGGV PQ+ Sbjct: 61 QRLLEKK--FSGQGPIRVLVLAPTRELALQIHENFMELGVEAGIRSAAVFGGVGAMPQIQ 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 R V+VA PGRLLDL +Q +KLD+V+ LVLDEADRMLDMGF+ DIR++++KLP + Sbjct: 119 AARRSS-VIVACPGRLLDLMNQGVIKLDKVDTLVLDEADRMLDMGFLPDIRKIMSKLPQR 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSAT DDI+ LA+K+L+ P ++VA + V + V + K LL ++ Sbjct: 178 RQNLLFSATMPDDIRDLADKILYRPATVQVAN-TAPAKTVEHVFYPVSQHLKNNLLFKVL 236 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + ++ +LVFTRTKH A +LA +L G ++ + GN SQ R RAL F+ G +V+V Sbjct: 237 EQTDYDSLLVFTRTKHKAKNLARRLAARGHKATFLQGNMSQNQRQRALDGFRDGSFKVMV 296 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D + + HVVN ++P+ E Y HRIGRTGRA +G A S V D+ +L+R+I Sbjct: 297 ATDIAARGIDCDRITHVVNLDVPDTAETYTHRIGRTGRAGRSGSAFSFVTRDDLRLMREI 356 Query: 361 EKLLKKEIPRIAIPGYEPD-PSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRR-GEGGAK 418 EK + I + ++ D P+ P + G ++ R G R + R+ E Sbjct: 357 EKAVGYSIEHRTLEDFDYDKPNTHPAPAKRGGGRKPAADRKPAGERRPGRGRKPAEARDG 416 Query: 419 SASAKPAEKPSR---------RLGDAKPAGEQQRRRRPRKPA 451 S KPA + R PA RR R + Sbjct: 417 DESRKPAGERKSGGRRKPGGGRKPSGGPAKSSDERRDSRPSS 458 >UniRef50_B8FPB9 DEAD/DEAH box helicase domain protein n=12 Tax=Bacteria RepID=B8FPB9_DESHD Length = 428 Score = 569 bits (1468), Expect = e-161, Method: Composition-based stats. Identities = 202/420 (48%), Positives = 268/420 (63%), Gaps = 11/420 (2%) Query: 4 DSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHL 63 + L + I +A+A QGY E TPIQ +AIP +LEG DL+ AQTGTGKTA F +P+LQ L Sbjct: 7 NELKIINPIQKALAAQGYSEATPIQAEAIPHLLEGLDLLGCAQTGTGKTAAFAIPILQSL 66 Query: 64 ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLR 123 Q KG+R +RAL+L PTRELA QI E+ Y L +R+LV+FGGV PQ KL Sbjct: 67 AMGQGLLKGKRQIRALVLAPTRELATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKLE 126 Query: 124 GGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQN 183 G+D+LVATPGRLLDL +Q + L VE VLDE D+MLDMG +HD++R++T LP +RQN Sbjct: 127 KGIDILVATPGRLLDLINQGFIDLSHVEHFVLDETDQMLDMGMLHDVKRIITYLPRERQN 186 Query: 184 LLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKG 243 +LFSAT +I+ LA+ +L P++I + + D + Q V+FVDK K LL++ + Sbjct: 187 MLFSATMPVEIEKLADTILKGPVKIAMTPEFSPLDIIEQEVYFVDKANKAALLTYWLKNN 246 Query: 244 NWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATD 303 + VLVF+RTKHGA+ + ++LNK G + AIHGNKSQ R +AL FK R+LVATD Sbjct: 247 EYDSVLVFSRTKHGADKIVKELNKKGFTAVAIHGNKSQANREQALHAFKKRKTRILVATD 306 Query: 304 IAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKL 363 IAARGLDI+EL HV+NY LP VPE Y+HRIGRTGRA G+A++ +E LLRDI+K Sbjct: 307 IAARGLDIQELSHVINYNLPEVPETYIHRIGRTGRAGLGGKAITFCDFEEKPLLRDIQKR 366 Query: 364 LKKEIPRIA-----------IPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRR 412 + K +P + +P + A Q + QG R + PR+ Sbjct: 367 IGKTLPEVKEHPYPLVNTVIVPKAKTSQQAAAARPQKPATAKTAAYSQQGAHRAKPNPRK 426 >UniRef50_C6ATS7 DEAD/DEAH box helicase domain protein n=15 Tax=Alphaproteobacteria RepID=C6ATS7_RHILS Length = 580 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 203/448 (45%), Positives = 270/448 (60%), Gaps = 4/448 (0%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+SLG+S I+ + + G PTPIQ+ +IP +LEGRDL+ AQTGTGKTA F LPL++ Sbjct: 24 NFESLGVSKPIIATLFQLGIETPTPIQEHSIPLLLEGRDLIGLAQTGTGKTAAFGLPLIE 83 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L+ + R R LIL PTREL QI E+++ + + ++R VV GGVSIN Q ++ Sbjct: 84 KLLADE-RRPDNRTTRTLILAPTRELVNQIAESLKKFIRKSSLRINVVVGGVSINKQQLQ 142 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L G D+LVATPGRLLDL ++ A+ L V LVLDEAD+MLD+GF+HD+R++ +P KR Sbjct: 143 LEKGTDILVATPGRLLDLINRRAITLTAVRYLVLDEADQMLDLGFVHDLRKIAKMVPKKR 202 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVD-KKRKRELLSHMI 240 Q +LFSAT I LA + L +P+++EV A+D+V Q+VHFV K K ELL + Sbjct: 203 QTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAADKVEQYVHFVAGKNDKTELLRKSL 262 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + +VF RTKHGA L + L G A+IHGNKSQG R RAL F+ G I+ L+ Sbjct: 263 TENPDGRAMVFLRTKHGAEKLMKHLENIGYSVASIHGNKSQGQRERALKAFRDGSIKTLI 322 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+DI + HV NY+LP VP+ YVHRIGRT RA G A++ DE KLLRDI Sbjct: 323 ATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRIGRTARAGRDGIAIAFCAPDEAKLLRDI 382 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 E+L+ +I + G P NG GQG + RG+ Sbjct: 383 ERLMGIDITVAS--GEAPANISGGPRRANGNGNNRNRNGGQGREGQGRGEGRGDQNRSEH 440 Query: 421 SAKPAEKPSRRLGDAKPAGEQQRRRRPR 448 E+ RR G+ RRPR Sbjct: 441 RGNRQERRPRREGEGSEVRAGGEERRPR 468 >UniRef50_P0A9P7 Cold-shock DEAD box protein A n=201 Tax=Bacteria RepID=DEAD_ECOL6 Length = 629 Score = 568 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 156/394 (39%), Positives = 232/394 (58%), Gaps = 7/394 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGL IL A+ + GY +P+PIQ + IP +L GRD++ AQTG+GKTA F+LPLLQ Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 +L + + L+L PTRELA Q+ E + D+SK++ + + ++GG + Q+ Sbjct: 67 NLDPEL------KAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR 120 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR G ++V TPGRLLD + + L ++ LVLDEAD ML MGFI D+ ++ ++P Sbjct: 121 ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG 180 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LFSAT + I+ + + + P E+ + T ++Q V RK E L + Sbjct: 181 HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL 240 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++ ++F RTK+ +AE L ++G SAA++G+ +Q R + L K G + +L+ Sbjct: 241 EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI 300 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD+E + VVNY++P E YVHRIGRTGRA G AL V E +LLR+I Sbjct: 301 ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQR 394 E+ +K IP + +P E + E QQ+ Sbjct: 361 ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQ 394 >UniRef50_Q04VV9 ATP-dependent RNA helicase (Superfamily II) n=4 Tax=Leptospira RepID=Q04VV9_LEPBJ Length = 513 Score = 567 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 146/386 (37%), Positives = 224/386 (58%), Gaps = 7/386 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F L LS +I A+ E G+ E +PIQ +AIP +L+G+D++ AQTGTGKTA F +P + Sbjct: 4 LKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPAI 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 + L H ++ALIL PTREL Q+ E R KY + V+GG I Q+ Sbjct: 64 ELLEVESKH------LQALILCPTRELVIQVSEQFRKLMKYKGNFEVVPVYGGQEIERQL 117 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 LR +++ATPGR++D + +++L+ ++I+VLDEAD MLDMGF D+ +L P Sbjct: 118 KALRKNPQIVIATPGRMMDHMRRGSIRLNDIKIVVLDEADEMLDMGFREDMEFILKDTPI 177 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ ++FSAT ++DI L ++ +P I+V + ++ ++ Q + + + K E L+ + Sbjct: 178 DRQTIMFSATMTEDILTLMKRFQKHPQIIDVTHQKLSAPKIEQIYYEIQENAKGEALARL 237 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I N + LVF TK + + E L G + A+HG+ +Q R + + F++G+I +L Sbjct: 238 IEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMNGFRNGNIEIL 297 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+A RG+D+ + V NY+LP EDYVHRIGRTGRA G A S + + L+ Sbjct: 298 VATDVAGRGIDVNNVEAVFNYDLPRDGEDYVHRIGRTGRAGKKGIAFSFIVGKQIYNLKK 357 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAE 385 IE++ +I IP + K Sbjct: 358 IERINGIKIEAGKIPTLDDLEETKIH 383 >UniRef50_Q24I45 DEAD/DEAH box helicase family protein n=2 Tax=Tetrahymena thermophila RepID=Q24I45_TETTH Length = 713 Score = 567 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 160/457 (35%), Positives = 245/457 (53%), Gaps = 10/457 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +S+ I+ V + +P+PIQ A P VL G DL+ A+TG+GKT F LP + Sbjct: 101 LSWTDTHFPQYIMNEVTHAKFEKPSPIQSLAFPVVLSGHDLIGIAETGSGKTLSFLLPSI 160 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + KG P+ L+L PTRELA QI + K ++ ++GG Q Sbjct: 161 VHINAQPTVKKGDGPI-VLVLAPTRELAMQIERESERFGKSSKLKCACIYGGADKYSQRA 219 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GVDV++ATPGRL+D L +V LVLDEADRMLDMGF IR++L ++ Sbjct: 220 LLQQGVDVVIATPGRLIDFLESETTTLRRVTYLVLDEADRMLDMGFEIQIRKILGQIRPD 279 Query: 181 RQNLLFSATFSDDIKALAEKLLHN-PLEIEVARRNTA-SDQVTQHVHFVDKKRKRELLSH 238 RQ L+FSAT+ +++ LA+ N P+ +++ + A ++++ Q V+ D+ +K L Sbjct: 280 RQTLMFSATWPKNVQNLAQDYCKNTPVYVQIGKHELAINERIKQIVYVTDQSKKINQLIK 339 Query: 239 MIG-KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + +VL+F +TK G ++ LNK+G + AIHG+K+Q R + FKSG+ R Sbjct: 340 QLDCLTQKDKVLIFAQTKKGCESMSRILNKEGFKCLAIHGDKAQKDRDYVMNKFKSGECR 399 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC-VDEHKL 356 +L+ATD+A+RGLD++++ HV NY+ P V EDYVHRIGRTGRA A G A+S + D+ K+ Sbjct: 400 ILIATDVASRGLDVKDVSHVFNYDFPKVMEDYVHRIGRTGRAGAYGCAVSFLTFEDDKKI 459 Query: 357 LRDIEKLL---KKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRG 413 R+ ++L K+EIP + +P + + + + Sbjct: 460 SREYVQMLHDAKQEIPIDLLDLASINPRYRTQYKTVSSSYYDIKKFNSADTSKPSENQNV 519 Query: 414 EGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKP 450 A S+ + + K E +R R R P Sbjct: 520 SNTANSSDKYTSSSSYNQYKSKKD--EDDKRSRSRSP 554 >UniRef50_B6BTD3 Dead/deah box helicase domain protein n=1 Tax=beta proteobacterium KB13 RepID=B6BTD3_9PROT Length = 444 Score = 567 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 173/435 (39%), Positives = 261/435 (60%), Gaps = 4/435 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF + G P I +A++ Y PTPIQ+Q IP VL G+D++ASAQTGTGKTA F LPLL Sbjct: 1 MSFSNFGFIPPIGKAISRINYSTPTPIQEQCIPVVLSGKDVLASAQTGTGKTAAFCLPLL 60 Query: 61 QHLITRQPHAKGRR-PVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 + + H R LIL+PTRELA QI + ++ +S +++ + V GGVS Q Sbjct: 61 NLVEKKPKHKHKRNISPDVLILSPTRELATQIEQELKRFSHFMDTNIVSVVGGVSYKLQN 120 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ V+ LVATPGRL+DL Q + L ++ LV+DEADRMLDMGFI DI+++ Sbjct: 121 KLLKSNVNFLVATPGRLMDLVKQRKINLKHIDALVIDEADRMLDMGFIPDIKKIFESTSQ 180 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFV-DKKRKRELLSH 238 +Q L+F+AT + I+ +A++ L +P I V + N ++ + Q + V D +K+ +L Sbjct: 181 DQQVLMFTATLNKQIEKIAQQFLKDPQRIAVEQENKSNKNIQQIAYPVADYNQKKLVLVD 240 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + + Q ++FT TK A+ L+++L RS +HG+ SQ RTR + FK+ +I++ Sbjct: 241 VLNEADLNQAIIFTATKREADRLSDELYLMNHRSKTLHGDMSQRERTRTINRFKNNEIQI 300 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARG+D++++ HV+N++LP EDY+HRIGRTGRA G+A+SLV E +L+ Sbjct: 301 LVATDVAARGIDVDDITHVINFDLPRQVEDYIHRIGRTGRAERKGKAISLVIDKEKFMLQ 360 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSI--KAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 IEK +I I D S+ K + +++R G R + R+ G Sbjct: 361 KIEKYANIKIEVIKSTHSTSDLSLVYKKKESGFKKKRRSSGSRKKNDKFTSSSKRKKHGF 420 Query: 417 AKSASAKPAEKPSRR 431 AK +P ++ Sbjct: 421 KADVKAKSRRRPVKK 435 >UniRef50_C0Q9A4 DeaD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9A4_DESAH Length = 616 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 157/388 (40%), Positives = 227/388 (58%), Gaps = 7/388 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +GL +L+A+ + GY PT IQ + IP +L GRDL+ AQTGTGKTA F LPLL Sbjct: 21 FSEMGLIKPVLKALDDLGYETPTTIQAETIPYILAGRDLLGQAQTGTGKTAAFALPLLSR 80 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYS-KYLNIRSLVVFGGVSINPQMMK 121 + + + + L+L PTRELA Q+ E+ + Y+ + L V+GG + Q+ + Sbjct: 81 IDIKL------KKPQVLVLAPTRELAIQVAESFKGYAARIKGFNVLPVYGGQAYAGQLNQ 134 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV V+V TPGRL+DL + + L Q+ LV+DEAD ML MGFI D+ +L + P R Sbjct: 135 LKRGVHVIVGTPGRLMDLMKRGVLDLTQIMTLVIDEADEMLRMGFIDDVEWILEQTPPGR 194 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT IK +A K L +P ++ + R +D + Q V K + L+ ++ Sbjct: 195 QVALFSATMPAPIKKIAIKYLTDPKDVFIRLRTATADTIRQRFWMVKGTHKLDALTRILE 254 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + ++VF RTK LAE+L G + A++G+ +Q AR R + FK G I +LVA Sbjct: 255 AETFDAIIVFVRTKTATVELAEKLEARGYAAVALNGDIAQKARERTIDRFKKGKIDILVA 314 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + HV+NY++PN E YVHRIGRTGRA G+A+ V E +L+ IE Sbjct: 315 TDVAARGLDVERVSHVINYDIPNGAESYVHRIGRTGRAGRAGDAILFVSPRERWMLKVIE 374 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQN 389 K +++I + +P E + Sbjct: 375 KTTRQQIEMMKLPSTEAINDKRIADFNQ 402 >UniRef50_Q0BSI7 ATP-dependent RNA helicase n=54 Tax=Alphaproteobacteria RepID=Q0BSI7_GRABC Length = 763 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 197/460 (42%), Positives = 263/460 (57%), Gaps = 16/460 (3%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LGLS + RA+ E GY PTPIQ QAIP VL GRD++ AQTGTGKTA FTLP++ Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDI 284 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 L R+ A R R+LIL PTRELA Q+ EN Y +YL + ++ GG S+N Q L Sbjct: 285 LSDRRARA---RMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMNDQRDVL 341 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 GVDVL+ATPGRL+DL + + L ILV+DEADRMLDMGFI D+ R+++ LP RQ Sbjct: 342 SKGVDVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLDMGFIPDVERIVSLLPHNRQ 401 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 L FSAT + +I+ LA+ L NP EI VA+ + + +T + V + KR+ L H++ + Sbjct: 402 TLFFSATMAPEIRRLADAFLQNPKEITVAKPASVATTITSGLALVGEMDKRKALRHLLRQ 461 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 Q L+F K + L + L K G + +HG+ +Q R L FK+G +++LV + Sbjct: 462 EKVQNALIFCNRKRDVDILTKSLVKHGFAAGPLHGDLAQSLRFSTLEKFKAGSLQLLVCS 521 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARG+DI L HV N+++P EDYVHRIGRTGRA G A +L D+ + IEK Sbjct: 522 DVAARGIDIGGLSHVFNFDVPIHAEDYVHRIGRTGRAGREGAAFTLASPDDKFAVDAIEK 581 Query: 363 LLKKEIPRIAIPGYEPDPSIKAEPIQNGRQ---QRGGGGRGQGGGRGQQQPRRG----EG 415 L+ IPRI I G E + GR+ +GG G + G RGQ R+ E Sbjct: 582 LINAPIPRIEIEGLERAEWSEEPNRGRGRRHKNGKGGKGNNRYGSRGQDNARKDRAFTEA 641 Query: 416 GAKSASAKPAEK------PSRRLGDAKPAGEQQRRRRPRK 449 AKS + + A+P Q R R R Sbjct: 642 DAKSQADITPDPVAEVATTQPAPAPAQPTQSQDRHHRSRN 681 >UniRef50_UPI00006CD03A P68-like protein, putative n=1 Tax=Tetrahymena thermophila RepID=UPI00006CD03A Length = 699 Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 150/422 (35%), Positives = 234/422 (55%), Gaps = 25/422 (5%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAI-------------------PAVLEGRDL 41 + ++ I+ + + + EP PIQ Q + P VL G DL Sbjct: 194 IKWNETKFPKYIMSVIEDSKFSEPMPIQAQYVTNKKQKKKYKMYECSFIPFPIVLSGHDL 253 Query: 42 MASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKY 101 + AQTG+GKT F LP L H+ + P G P+ AL+L PTRELA QI E + Sbjct: 254 IGIAQTGSGKTLSFMLPALVHINAQDPVKPGEGPI-ALVLAPTRELANQIQEQCFKFGSK 312 Query: 102 LNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRM 161 I S+ V+GG Q +LR G D+++ATPGRL+D N + L +V LVLDEADRM Sbjct: 313 CKISSVCVYGGAPKIYQEKELRNGCDIVIATPGRLIDFLESNVIDLKRVTYLVLDEADRM 372 Query: 162 LDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLH-NPLEIEVAR-RNTASDQ 219 LDMGF IR+++ ++ RQ L+FSAT+ ++ LA H +P+ I++ N ++ Sbjct: 373 LDMGFEPSIRKIVGQIRPDRQTLMFSATWPQTVRRLALDFCHGDPIHIQIGDMENNVNND 432 Query: 220 VTQHVHFVDKKRKRELLSHMIGKGNW-QQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGN 278 + Q V +DK +K + + ++ + ++FT+TK + L++ L D IR+ IHG+ Sbjct: 433 IDQQVEIIDKSQKYDRVKEILSTMTRSDKTIIFTQTKKDCDDLSKALQTDNIRNICIHGD 492 Query: 279 KSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGR 338 KSQ R + + FK+G + L+ATD+A+RGLD++++ V+NY+ P EDYVHR+GRTGR Sbjct: 493 KSQRDRDKVMDLFKTGRVNTLIATDVASRGLDVKDIKLVINYDFPKQIEDYVHRVGRTGR 552 Query: 339 AAATGEALSLVCV-DEHKLLRDIEKLLKKEIPRIAIPGYE-PDPSIKAEPIQNGRQQRGG 396 A A G+A+S + ++ K+ +++ +LK+ I+ E + + K N + R Sbjct: 553 AGAQGKAISFLDQYEDKKISKELVDVLKQNNQEISQDLLELSEANYKGNYSNNYNKNRSS 612 Query: 397 GG 398 Sbjct: 613 KP 614 >UniRef50_C4Q2M5 DEAD box ATP-dependent RNA helicase, putative n=2 Tax=Schistosoma mansoni RepID=C4Q2M5_SCHMA Length = 879 Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 149/388 (38%), Positives = 224/388 (57%), Gaps = 2/388 (0%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F G I+ + + + PTPIQ Q P L GRDL+ AQTG+GKTA F LP + H Sbjct: 79 FSEAGFPSYIMSVIKKSKWDSPTPIQCQGWPVALSGRDLVGIAQTGSGKTASFLLPAIVH 138 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + +G P+ LIL PTRELA Q+ + D+ +S ++GG S Q L Sbjct: 139 AKAQPSLKRGDGPI-VLILVPTRELAQQVEKVAEDFCYSAGFKSACLYGGASRTGQAEAL 197 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 +V++ATPGRLLD + + LVLDEADRMLDMGF IRRV++++ RQ Sbjct: 198 GQSPEVVIATPGRLLDFLESRHTNMRRCTYLVLDEADRMLDMGFEPSIRRVVSQVRPDRQ 257 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMIG 241 L++SAT+ ++KALAE L++ ++I V +A+ + QHV +++ K + L ++ Sbjct: 258 TLMWSATWPREVKALAEDFLYDYIQINVGSTKLSANHNIRQHVEILNESEKFKRLLSLLN 317 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +VLVFT TK + L ++L G + A+HG+K Q R RAL F+ G I VLVA Sbjct: 318 SFDNARVLVFTETKKRTDELCQKLQDKGFDATAMHGDKHQKERDRALDMFREGHISVLVA 377 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+A+RGLDI ++ +++NY+ P+ EDY+HRIGRTGR+ G A + + +L R++ Sbjct: 378 TDVASRGLDINDVRYIINYDYPSQTEDYIHRIGRTGRSDKKGTAYTFFSAKQPRLARELI 437 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQN 389 ++LK+ I ++ E ++ Sbjct: 438 EVLKEARQTIPDELFKIAEGYYVERTRS 465 >UniRef50_D1B4W7 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=D1B4W7_SULD5 Length = 583 Score = 565 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 151/390 (38%), Positives = 232/390 (59%), Gaps = 7/390 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+S GL DIL+A+ E G+ EP+P+Q +AIP VL+G D++A AQTGTGKTA F LP + Sbjct: 3 TFESFGLHQDILKAINEAGFTEPSPVQAEAIPLVLQGHDIVAQAQTGTGKTAAFGLPTMS 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + Q V+ L++TPTRELA Q+ + + ++ I+++ ++GG S + Q+ Sbjct: 63 MIDANQNR------VQLLVITPTRELATQVSDELYSLGRFCGIKTVTIYGGSSYSRQIGL 116 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 + G V+VATPGR+LDL + +++VLDEAD MLDMGF+ DI + T LP +R Sbjct: 117 IEKGASVIVATPGRMLDLLKNGRLPGFAPKMVVLDEADEMLDMGFLEDIEEIFTYLPKER 176 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT + IK LA K+LH P + + ++ T ++ + Q + +++ + + + ++ Sbjct: 177 QTLLFSATMPEPIKRLASKILHEPKFVSITPKDHTTNEDIEQLYYVINEYERDDAMIRLL 236 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++ +VF RTK + L+ QL G + +HG+ Q R + F+S I +LV Sbjct: 237 DALEPEKSIVFCRTKKEVDRLSTQLMAVGYAAKGLHGDMEQNQRESVIKAFRSSQIEILV 296 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGL++ ++ HV NY +P PE YVHRIGRTGRA G A++LV E ++ I Sbjct: 297 ATDVAARGLNVADISHVFNYHMPFDPESYVHRIGRTGRAGKKGTAITLVTPIEFHSMQRI 356 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 K + +I +P K I + Sbjct: 357 GKKVGSKIEHRIVPNLRDVKENKLIKIADD 386 >UniRef50_B3L9V8 Helicase, putative n=6 Tax=Alveolata RepID=B3L9V8_PLAKH Length = 528 Score = 565 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 148/416 (35%), Positives = 237/416 (56%), Gaps = 10/416 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 S +G +L+++ PTPIQ Q P L G+D++ A+TG+GKT F LP Sbjct: 114 SISKIGFPDYVLKSLKNNNIVTPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFV 173 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ + G P+ L+L PTRELA QI + +S IR+ +GGV + Q+ Sbjct: 174 HILAQPSLKYGDGPI-VLVLAPTRELAEQIRQECVKFSVESKIRNTCAYGGVPKSGQIYA 232 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV +L+A PGRL+DL QN L +V LVLDEAD+MLDMGF IR+++ ++ R Sbjct: 233 LKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFEIQIRKIVEQIRPDR 292 Query: 182 QNLLFSATFSDDIKALAEKLLHN-PLEIEVARRNTAS-DQVTQHVHFVDKKRKRELLSHM 239 Q L++SAT+ ++++LA L P+ + V + ++ Q ++ +++ K L + Sbjct: 293 QTLMWSATWPKEVQSLARDLCKQQPIHVNVGSLTLTACRRIKQEIYLIEEHEKIANLKLL 352 Query: 240 IGK--GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + + + +++VF TK A+ + + L DG+ + IHG+K Q R L DFK+G Sbjct: 353 LQRIFRDNDRIIVFVETKKNADFITKALRLDGVPALCIHGDKKQDERRWVLNDFKTGKSP 412 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +L+ATD+A+RGLDI+++ +VVN++ PN EDYVHRIGRTGRA A G + + + D+++L Sbjct: 413 ILIATDVASRGLDIKDVKYVVNFDFPNQIEDYVHRIGRTGRAGAHGASFTFLTSDKYRLA 472 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRG 413 RD+ K+L++ +P P + N ++ G G+ P +G Sbjct: 473 RDLVKILRES--EQPVP---PQLEKISYTSANNPRRNPYYGYGRSSHNVNNIPLKG 523 >UniRef50_Q2RQT0 DEAD/DEAH box helicase n=59 Tax=root RepID=Q2RQT0_RHORT Length = 799 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 188/441 (42%), Positives = 257/441 (58%), Gaps = 12/441 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F LGLSP+ LRA+ E GY PTPIQ QAIP V GRD++ AQTGTGKTA FTLP++ Sbjct: 1 MTFADLGLSPETLRAIEEVGYTTPTPIQVQAIPYVQMGRDVLGIAQTGTGKTASFTLPMI 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + + A R R+LIL PTRELA Q+ EN Y KY + ++ GG S+N Q Sbjct: 61 DILASGKAKA---RMPRSLILAPTRELATQVSENFTLYGKYQKLSMALLIGGESMNEQQK 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GVDVL+ATPGRL+DL + ++ L V++LV+DEADRMLDMGFI D+ R++ LP Sbjct: 118 VLDRGVDVLIATPGRLIDLFERGSILLRDVKVLVIDEADRMLDMGFIPDVERIVALLPKI 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ L FSAT +I+ LA+ L NP E+ + ++ V Q + V KRE L ++ Sbjct: 178 RQTLFFSATMDKEIRRLADAFLMNPKEVRIEPTQKVAETVEQALIMVKASEKREALRQLL 237 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +F K + L + L+ G A+HG+ Q RT L FK +++++V Sbjct: 238 RRETVTNAFIFCNRKRDVDVLYKSLSGHGFDILALHGDMPQYVRTERLEKFKRAEVQLMV 297 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 +D+AARG+D+ E+ HV N+++P PEDY+HRIGRTGRA G A +L ++ K LR I Sbjct: 298 CSDVAARGIDVTEVSHVFNFDVPTHPEDYIHRIGRTGRAGRLGRAYTLATPEDAKYLRAI 357 Query: 361 EKLLKKEI---PRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 E LL K I P++ + + A + R +RGG GR + G R R G G A Sbjct: 358 ENLLGKTIPPDPQLELSDVAVEDVALAVAEDDRRPKRGGKGRPERGAR-----RSGRGSA 412 Query: 418 KSASAKPAEKPSRRLGDAKPA 438 + +P P R D P Sbjct: 413 DAERPRPL-APERAANDQAPV 432 >UniRef50_O97032 DjVLGB (Fragment) n=1 Tax=Dugesia japonica RepID=O97032_DUGJA Length = 781 Score = 564 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 167/430 (38%), Positives = 244/430 (56%), Gaps = 10/430 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD L L P I + Y+ PTPIQ+ AIPA+LE RD+MA AQTG+GKTA F +P++ Sbjct: 185 NFDELKLDPTIRNNILLASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTAAFLIPIIN 244 Query: 62 HL----ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINP 117 HL + +Q ++K P + LIL PTRELA QI + +S +RS VV+GG + Sbjct: 245 HLVCQDLNQQRYSKTAYP-KCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHS 303 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVL--T 175 Q+ +++ G +LVATPGRL+D +N + L+ + +VLDEADRMLDMGF IR+++ + Sbjct: 304 QIREVQMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLDEADRMLDMGFEPQIRKIIEES 363 Query: 176 KLPA--KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKR 233 +P+ RQ L+FSATF +I+ LA L+N + + V R + SD + Q + ++ K Sbjct: 364 NMPSGINRQTLMFSATFPKEIQKLAADFLYNYIFMTVGRVGSTSDSIKQEIIYMTDVEKL 423 Query: 234 ELLSHMIGKGNWQ-QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFK 292 L ++ +L+F TK GA+ LA L G ++IHG++SQ R AL+ F+ Sbjct: 424 NYLKNIFNTTAPNTLILIFVETKKGADSLARFLLSKGYPVSSIHGDRSQVEREAALSMFR 483 Query: 293 SGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVD 352 +G +LVAT +AARGLDI + HV+NY+LP+ E+YVHRIGRTGR G A S Sbjct: 484 NGQCPILVATAVAARGLDIPNVKHVINYDLPSDIEEYVHRIGRTGRLGNHGRATSFYVDK 543 Query: 353 EHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRR 412 + + D+ LLK+ + +K +R R + G G + R+ Sbjct: 544 NNNIAIDLVDLLKEANQIVPQWLSALADELKRNSTMGSNNKRHNQRRYKNGNFGGRDYRQ 603 Query: 413 GEGGAKSASA 422 G S Sbjct: 604 GPSNVNMNSG 613 >UniRef50_C4QFR3 DEAD box ATP-dependent RNA helicase, putative n=2 Tax=Schistosoma RepID=C4QFR3_SCHMA Length = 944 Score = 564 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 161/413 (38%), Positives = 230/413 (55%), Gaps = 13/413 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF+ + L I V Y PTP+Q+ A+P + RDLMA AQTG+GKTA F LP+L Sbjct: 160 SFNDVELHQIIKENVTRAQYIHPTPVQKYALPIIAAKRDLMACAQTGSGKTAAFLLPILN 219 Query: 62 HLITRQPHAKGRRP-------VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVS 114 L ALIL PTREL++QI + R +S NI+ VV+GG S Sbjct: 220 MLFEDNHCENSDASALSCAVCPLALILAPTRELSSQIYDEARKFSYRSNIKPCVVYGGAS 279 Query: 115 INPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVL 174 I Q+ +L G ++LVATPGRL+D+ + V L+Q+ VLDEADRMLDMGF IRR++ Sbjct: 280 ILAQIRELSHGCNLLVATPGRLVDMVSRGKVSLEQIRFFVLDEADRMLDMGFEPQIRRIV 339 Query: 175 TK--LPA--KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK 230 + +P KRQ L+FSATF +I+ LA LH+ + + V R + ++ + Q V V K Sbjct: 340 EQHGMPPAGKRQTLMFSATFPKEIQTLARDFLHSYIFLAVGRVGSTNENIIQEVLNVADK 399 Query: 231 RKRELLSHMIGKGNWQ-QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALA 289 K ++L ++ + LVF TK GA+ LA+ L + +IHG++ Q R AL Sbjct: 400 DKPDMLVRLLQGKDPDGLALVFVETKRGADVLAKFLCQLNFPVTSIHGDRPQTEREHALQ 459 Query: 290 DFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLV 349 F+SG +L+AT +AARGLDI + HV+N++LP+ E+YVHRIGRTGR G A S Sbjct: 460 SFRSGRTPILIATAVAARGLDIPNVKHVINFDLPSDIEEYVHRIGRTGRMGQPGSATSFF 519 Query: 350 CVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQG 402 ++RD+ +LL++ + P E + + P + + Sbjct: 520 SEKNQNVVRDLVELLRES-KQAVPPWLEARVAYPSGPASRRNKNINSNVNKKN 571 >UniRef50_Q6AMK6 Probable ATP-dependent RNA helicase n=1 Tax=Desulfotalea psychrophila RepID=Q6AMK6_DESPS Length = 632 Score = 564 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 179/502 (35%), Positives = 263/502 (52%), Gaps = 61/502 (12%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L D++ + + G+ +PTPIQ++AIP +L G DL+ AQTGTGKTA F LPLL + Sbjct: 57 FTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLNN 116 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + ++ V+AL+L PTRELA Q+G+ + YS LVV+GG S Q+ L Sbjct: 117 IDF------SKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGL 170 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 R G V+V TPGRLLDL Q ++KLDQ++ LVLDEAD ML MGFI DI +L++ P RQ Sbjct: 171 RRGARVVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPKDRQ 230 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 +LFSAT S + ++A + LH+P I ++ + + Q + ++ K ++ + Sbjct: 231 TMLFSATLSSRVMSIANRYLHSPESISISPKQMIGSSIEQRYYLINNSDKIAAITRVFEV 290 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 + L+F RT+ + LA +L G + + G+ SQ ARTR L+ FK G I+VLVAT Sbjct: 291 ETVESALIFARTRATVSELANELISRGFAAEGLSGDLSQEARTRVLSRFKKGQIKVLVAT 350 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARGLDI+++ HV NY+LP PE YVHRIGRTGRA +G A+SLV + + + R IE+ Sbjct: 351 DVAARGLDIDDISHVFNYDLPEDPEVYVHRIGRTGRAGRSGTAISLVTLRDRWMHRRIEQ 410 Query: 363 LLKKEIPRIAIPGYEPDPSIK--------------------------------------- 383 K++ + +P E + Sbjct: 411 YTGKKLIKGELPTVEQIEEHRNTQFLERLDVWIRRGRCRGEREIVEALVEQGMDPLDVAA 470 Query: 384 --------------AEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSAS--AKPAEK 427 +PI+ + GG R +G + RG+ G +S S +P + Sbjct: 471 AALKIVRKDETKRPIDPIKPVIEDAGGRNRKRGDRNDRGANGRGDRGGRSDSRGGRPQGR 530 Query: 428 PSRRLGDAKPAGEQQRRRRPRK 449 R G +++ R+ Sbjct: 531 RDDRFAKGGDRGPKKKGDDVRQ 552 >UniRef50_B0TQ71 DEAD/DEAH box helicase domain protein n=31 Tax=Gammaproteobacteria RepID=B0TQ71_SHEHH Length = 437 Score = 564 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 210/400 (52%), Positives = 276/400 (69%), Gaps = 3/400 (0%) Query: 15 AVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRR 74 VA++GY++PT IQ +AIPA+L GRD+MASAQTGTGKTA FTLPLLQ LI + + + Sbjct: 39 VVAQKGYQQPTAIQAEAIPAILAGRDIMASAQTGTGKTAAFTLPLLQRLIDKSSSDEQSK 98 Query: 75 PVRA--LILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVAT 132 RA L+L PTRELA Q+ NV Y+ ++ S+V++GGVSI+ Q KL GVDV+VAT Sbjct: 99 AKRASVLVLAPTRELAVQVNTNVSQYAVNTDVSSIVIYGGVSIDAQATKLAAGVDVIVAT 158 Query: 133 PGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSD 192 PGRLLD + + L +E LV DEADRMLDMGF+ +I +L +LPAKRQ LLFSATFS Sbjct: 159 PGRLLDHVRRGTLNLSDIEYLVFDEADRMLDMGFMDEINAILKQLPAKRQTLLFSATFSS 218 Query: 193 DIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFT 252 I L++KLL PL IEV + N+A++ + Q V+ VD +RK ELL H+I K WQQVLVF+ Sbjct: 219 AIFELSKKLLQKPLRIEVDKANSAANSIEQVVYAVDSERKTELLCHLINKSAWQQVLVFS 278 Query: 253 RTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIE 312 R K A+ +A+++ GI + A HG+ QGAR + L DFK G I+ LVATD+AARGLDI Sbjct: 279 RKKQTADLIAQKMLAAGIEAKAFHGDLGQGAREQVLNDFKQGKIKALVATDVAARGLDIV 338 Query: 313 ELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIA 372 EL VVNYE+P V EDYVHRIGRTGRA TG+A++L D+ LL ++E ++ K +P+ Sbjct: 339 ELKVVVNYEIPFVAEDYVHRIGRTGRAGNTGKAITLYSEDDALLLEEVESVIDKRLPQQW 398 Query: 373 IPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRR 412 + G+EPD + K EP+ + R + G + RR Sbjct: 399 LEGFEPDLT-KLEPVTRKNSKAAQRQRAKKRALGADKRRR 437 >UniRef50_Q3SF48 DEAD/DEAH box helicase n=7 Tax=cellular organisms RepID=Q3SF48_THIDA Length = 533 Score = 564 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 181/449 (40%), Positives = 245/449 (54%), Gaps = 13/449 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF LGL P IL++V GY TP+QQQAIPA L G DL+ S+ TG+GKTA F LP + Sbjct: 1 MSFSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSGKTAAFLLPSI 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 Q L+ R L+LTPTRELA Q+ + Y K + R+ + GG Q+ Sbjct: 61 QRLLAEPAVKSI--GPRVLVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGGAPYGLQL 118 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 +L VDV+VATPGRL+D + + ++E+LVLDEADRMLDMGF+ DI+ + + PA Sbjct: 119 KRLSQPVDVVVATPGRLIDHLERGKIDFSRLEVLVLDEADRMLDMGFVDDIKAIAARCPA 178 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLSH 238 +RQ LLFSAT + LA +L + IE+ ++ Q + F D K LL Sbjct: 179 ERQTLLFSATLDGVVGNLARELTRDAQRIEIEAVPHKEAKIEQRLLFADNMDHKNRLLDA 238 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ Q +VF TK +++ L + G S A+HG+ QG R RAL + G RV Sbjct: 239 LLRDVEMVQAIVFASTKRSTEEISDLLAESGFASDALHGDMQQGQRNRALQRLREGRTRV 298 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARG+D+ + HV+N++LP EDYVHRIGRTGRA TG A+S + E L++ Sbjct: 299 LVATDVAARGIDVASISHVINFDLPRQAEDYVHRIGRTGRAGRTGIAVSFAGMREGGLVK 358 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAK 418 +IE+ I +PG EP NGR RG G RG R G + Sbjct: 359 NIERYTGNRIEVHTLPGLEPTQRPSTGRPGNGRP-RGNGPRGGYEKR--------SFGDR 409 Query: 419 SASAKPAEKPSRRLGDAKPAGEQQRRRRP 447 S ++P D + G + RR Sbjct: 410 SEPRSYGDRPRGDSRDNRDRGYRGDARRN 438 >UniRef50_Q5JKF2 DEAD-box ATP-dependent RNA helicase 40 n=11 Tax=Viridiplantae RepID=RH40_ORYSJ Length = 792 Score = 564 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 161/419 (38%), Positives = 241/419 (57%), Gaps = 10/419 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF++ G P+IL+ + G+ PTPIQ Q+ P L+ +D++A A+TG+GKT G+ LP Sbjct: 151 SFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFM 210 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ ++ R L+L PTRELA QI E + + I S ++GG PQ+ Sbjct: 211 HI--KRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRD 268 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GVDV+VATPGRL D+ + L QV LVLDEADRMLDMGF IR+++ ++P +R Sbjct: 269 LDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRR 328 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRN--TASDQVTQHVHFVDKKRKRELLSHM 239 Q L+++AT+ +++ +AE LL +P+++ + + A+ +TQ+V + K L + Sbjct: 329 QTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQI 388 Query: 240 IGKGN-WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 + + +VL+F TK + LA L + ++AIHG+KSQ R + L+ F+SG + Sbjct: 389 LRSQDSGSKVLIFCTTKRMCDQLARTLTRQ-FGASAIHGDKSQSEREKVLSHFRSGRSPI 447 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLDI+++ V+NY+ P EDYVHRIGRTGRA ATG A + C + K Sbjct: 448 LVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAA 507 Query: 359 DIEKLLK---KEIPR-IAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRG 413 D+ K+L+ + +PR +A + R RGG G + G Sbjct: 508 DLIKILEGANQRVPRDLADMASRGGRGGRKRNRWATRSDRGGSHSELDSRYGGRDGLSG 566 >UniRef50_D2LXV0 DEAD/DEAH box helicase domain protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LXV0_BACS4 Length = 500 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 141/391 (36%), Positives = 227/391 (58%), Gaps = 6/391 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L + P I+ A+ + G+ E TPIQ++ IP EG+D++ AQTGTGKT F +P ++ Sbjct: 4 FKDLNIQPSIVEAIEKMGFEETTPIQEKVIPLGKEGQDIIGQAQTGTGKTVAFGIPCVEQ 63 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 ++ + H +AL+LTPTRELA Q+ E + + I++L ++GG I Q+ L Sbjct: 64 VVVEEKH------PQALVLTPTRELAIQVAEELNKLGQVKGIKALPIYGGQEITRQITAL 117 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 + ++VATPGR +D + ++ + ++I+VLDEAD ML MGFI DI +L ++P +RQ Sbjct: 118 KKRPQIIVATPGRYMDHMRRKTIRPEFLKIVVLDEADEMLSMGFIEDIETILQEVPGERQ 177 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 LLFSAT +K +A++ ++ P+ I V + + + Q + +K K + L +++ Sbjct: 178 TLLFSATMPPKLKTIADRFMNKPVSIAVKAKQLTVENIEQRYIALSEKEKFDTLCNLLDM 237 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 + ++F RTK + L E L+ G +HG+ Q R + + FK G I V+VAT Sbjct: 238 ETPELAIIFGRTKRRVDELTESLSIRGFAVEGLHGDMKQERRDQVIRKFKRGSIDVMVAT 297 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARGLD+ ++ HV+N++LP E YVHRIGRTGRA G + S V E LR IE+ Sbjct: 298 DVAARGLDVNDVSHVINFDLPQDSESYVHRIGRTGRAGKKGISYSFVTHKEKDHLRYIEE 357 Query: 363 LLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQ 393 ++++ ++ P + + N ++ Sbjct: 358 STRQKMKQVDAPTLADAMRGRHKQAVNELKK 388 >UniRef50_B8J1L5 DEAD/DEAH box helicase domain protein n=3 Tax=Bacteria RepID=B8J1L5_DESDA Length = 595 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 155/398 (38%), Positives = 230/398 (57%), Gaps = 8/398 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF+ LGLS ++L+AV + G+ EP+PIQ A+P +L G D AQTGTGKTA F LP+L Sbjct: 4 SFEELGLSRELLKAVEDMGFEEPSPIQVLAVPCLLAGNDAFGQAQTGTGKTAAFGLPILD 63 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 L R +ALIL PTRELA Q+ E + + + + L ++GG I Q+ Sbjct: 64 KLTPE-------RNTQALILCPTRELAIQVAEELNKLAAHKRGVAILPIYGGQPIERQLR 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GV V+V TPGR++D + ++L Q + VLDEAD MLDMGF DI +L + PA Sbjct: 117 ALAKGVQVVVGTPGRVMDHLKRGTLRLSQASMAVLDEADEMLDMGFREDIEAILEQTPAS 176 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q +LFSAT I+ L+++ L P + VA++ + Q + V +K + L ++ Sbjct: 177 CQRVLFSATVPPAIRELSKRFLREPEMLTVAQKMLTVPAIEQIYYEVRPHQKMDALCRLL 236 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + LVF TK GA+ + L + G +S ++HGN +Q R R + F++ + VLV Sbjct: 237 DSRAFHKALVFCSTKRGADEVTTHLQQRGYQSDSLHGNLAQSQRDRVMQRFRAEGLDVLV 296 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD++++ V+NY++P+ E YVHRIGRTGRA G A + V + EH +RDI Sbjct: 297 ATDVAARGLDVDDVDAVINYDIPHDVEKYVHRIGRTGRAGRVGSAFTFVTMREHYKMRDI 356 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGG 398 + + I +P +I+ + + +Q G Sbjct: 357 IRCTRARITEGRLPSLRDVDNIRTSRLLDEVRQTVESG 394 >UniRef50_Q9SQV1 DEAD-box ATP-dependent RNA helicase 40 n=14 Tax=Eukaryota RepID=RH40_ARATH Length = 1088 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 157/414 (37%), Positives = 239/414 (57%), Gaps = 11/414 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+S GL P+ILR + G+ PTPIQ Q P L+ RD++A A+TG+GKT G+ +P Sbjct: 435 ITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAF 494 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 ++ R R LIL PTRELA QI + + + I ++GG PQ+ Sbjct: 495 --ILLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLK 552 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L G D++VATPGRL D+ + QV +LVLDEADRMLDMGF IR+++ ++P + Sbjct: 553 ELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPR 612 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN--TASDQVTQHVHFVDKKRKRELLSH 238 RQ L+++AT+ +++ +A LL NP+++ + R + A+ +TQ+V V + K L Sbjct: 613 RQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQ 672 Query: 239 MIG-KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++ + +V++F TK +HLA + + + IHG+K+QG R L F+SG Sbjct: 673 ILRSQERGSKVIIFCSTKRLCDHLARSVGRH-FGAVVIHGDKTQGERDWVLNQFRSGKSC 731 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 VL+ATD+AARGLDI+++ V+NY+ P EDYVHRIGRTGRA ATG A + + K Sbjct: 732 VLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYA 791 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNG---RQQRGGGGRGQGGGRGQQ 408 D+ K+L+ +P D +++ + +RG R GG G + Sbjct: 792 PDLIKVLEGA--NQQVPPQVRDIAMRGGGGGGPGYSQDRRGMVNRFDSGGGGTR 843 >UniRef50_O00571 ATP-dependent RNA helicase DDX3X n=262 Tax=cellular organisms RepID=DDX3X_HUMAN Length = 662 Score = 563 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 159/388 (40%), Positives = 224/388 (57%), Gaps = 20/388 (5%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF + + I+ + Y PTP+Q+ AIP + E RDLMA AQTG+GKTA F LP+L Sbjct: 181 SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS 240 Query: 62 HLITRQP------------HAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVV 109 + + P + + ++ +L+L PTRELA QI E R +S +R VV Sbjct: 241 QIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV 300 Query: 110 FGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHD 169 +GG I Q+ L G +LVATPGRL+D+ + + LD + LVLDEADRMLDMGF Sbjct: 301 YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ 360 Query: 170 IRRVLTK--LPAK--RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVH 225 IRR++ + +P K R ++FSATF +I+ LA L + + V R + S+ +TQ V Sbjct: 361 IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV 420 Query: 226 FVDKKRKRELLSHMIGKGNWQQ-VLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGAR 284 +V++ KR L ++ LVF TK GA+ L + L +G +IHG++SQ R Sbjct: 421 WVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR 480 Query: 285 TRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGE 344 AL F+SG +LVAT +AARGLDI + HV+N++LP+ E+YVHRIGRTGR G Sbjct: 481 EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL 540 Query: 345 ALSLVCVDEHKLLRDIEKLL---KKEIP 369 A S + +D+ LL K+E+P Sbjct: 541 ATSFFNERNINITKDLLDLLVEAKQEVP 568 >UniRef50_Q46G62 ATP-dependent RNA helicase n=7 Tax=cellular organisms RepID=Q46G62_METBF Length = 579 Score = 563 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 147/392 (37%), Positives = 224/392 (57%), Gaps = 7/392 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGR-DLMASAQTGTGKTAGFTLPLLQ 61 F +LGLS +L+A+ ++G+ EPTPIQ++ IP L+G D++ AQTGTGKT F P+++ Sbjct: 7 FKALGLSDSMLKALKKKGFEEPTPIQEKVIPLFLKGECDIIGQAQTGTGKTTAFGAPIIE 66 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + + V+A++LTPTRELA Q+ E + + + ++GG S+ Q Sbjct: 67 KI------PEKSGKVQAIVLTPTRELAIQVSEELNSLKGDKKLHIVPIYGGQSMTQQFRM 120 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GVD++V TPGR++D + ++ L+ + VLDEAD ML+MGFI DI+ +L + Sbjct: 121 LKSGVDIVVGTPGRVIDHLERKSLNLENIAYFVLDEADEMLNMGFIDDIKEILKATGPDK 180 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 + L FSAT I + +K + N + + + + + Q V + K E L +I Sbjct: 181 RMLFFSATMPKPILGIIKKHMKNYEYVAIKKEDLDVNLTEQIYFEVKESDKFEALCRIID 240 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + LVF RTK + LA++L G + A+HG+ SQ R + L F+ I +LVA Sbjct: 241 IEDEFYGLVFCRTKTDTSQLAQKLGDRGYAADALHGDLSQREREKILNRFRKQKINILVA 300 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARG+DI +L HV+NY LP PE YVHRIGRTGRA G A++ V E++ L I+ Sbjct: 301 TDVAARGIDIMDLTHVINYSLPQDPESYVHRIGRTGRAGKQGTAITFVTSTEYRRLTYIK 360 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQ 393 K K + R IP + K ++ ++ Sbjct: 361 KTSKSAMKRGRIPEIKDVIKAKRARVKAELEE 392 >UniRef50_C7RHZ9 DEAD/DEAH box helicase domain protein n=3 Tax=Anaerococcus RepID=C7RHZ9_ANAPD Length = 536 Score = 562 bits (1451), Expect = e-159, Method: Composition-based stats. Identities = 143/377 (37%), Positives = 225/377 (59%), Gaps = 8/377 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+ L + +ILRA+ + GY +P+PIQ+++IP +LEG DL+ +QTG+GKTA F +P++ Sbjct: 1 MKFNELNIGNEILRAIDDLGYEKPSPIQEESIPHLLEGNDLIGKSQTGSGKTAAFAIPII 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 +++ + +ALIL PTREL Q+ + + KY I+ L V+GG I Q+ Sbjct: 61 ENI-------EANGITQALILCPTRELCIQVSKEIEKLYKYKKEIKILSVYGGSHIVRQI 113 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ GV+++V TPGRL+DL + +KLDQ++ +VLDEAD M DMGF D++ +L + Sbjct: 114 KSLKKGVEIVVGTPGRLMDLMRRKVLKLDQLKTVVLDEADEMFDMGFRDDMKFILDRTNP 173 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ FSAT +I+ ++ NP E+++ + D++ Q+ + + K E L + Sbjct: 174 NRQTCFFSATMGPEIQEFSKLYQTNPYEVKIKSKEVTVDRIDQYYIKLKESMKEEALMRL 233 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + +VF TK + L E L K +HG+ Q +R + + F++ I++L Sbjct: 234 LEIHKANLAIVFCNTKRKVDRLVESLTKKNYLVDGLHGDLKQSSRDQVMKKFRNKTIQIL 293 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARGLD++++ V NY+LP + E YVHRIGRT RA +G + SL+ ++ LR Sbjct: 294 VATDIAARGLDVDDVDIVFNYDLPQLDEYYVHRIGRTARAGKSGLSFSLISGRDNNRLRQ 353 Query: 360 IEKLLKKEIPRIAIPGY 376 IE K I ++ +P Sbjct: 354 IENYTKANIKQMPVPTL 370 >UniRef50_A7HKQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HKQ8_FERNB Length = 571 Score = 562 bits (1451), Expect = e-159, Method: Composition-based stats. Identities = 147/386 (38%), Positives = 227/386 (58%), Gaps = 6/386 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLE-GRDLMASAQTGTGKTAGFTLPLLQ 61 F+ GLS +IL A+ ++GY +PT IQ+ +P L +DL+A AQTGTGKTA F +PLL+ Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLLE 79 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + K + V+A+I+TPTRELA QI E ++ ++ ++GG S+ Q Sbjct: 80 RIDF-----KANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKD 134 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GVD++V TPGR++D +++ + L VE LVLDEADRMLDMGF+ D+ ++ + + Sbjct: 135 LEKGVDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLDMGFLDDVLEIIKRTGENK 194 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 + LFSAT +I +A K + + + + ++ Q VD+K K LL +I Sbjct: 195 RTFLFSATMPKEIVDIARKFMKEYIHVSTVKDELTTENAEQLYFEVDEKDKLPLLCRIID 254 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 +VF +TK + ++++L G + +HG+ SQ R R L F+ +R+LV Sbjct: 255 MNPDFYGIVFCQTKLEVDEISKKLLDLGYNADGLHGDYSQYQRERVLDKFRKKQLRILVT 314 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARG+DI+ L HV+NY +P PE YVHRIGRTGRA G A++ V D++ ++ Sbjct: 315 TDVAARGIDIDGLTHVINYSVPRDPEYYVHRIGRTGRAGKKGFAITFVTRDDYFHFARVK 374 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPI 387 + K +I + +IP E + + E + Sbjct: 375 RFAKAKIIKDSIPQVEDILNRQLEKL 400 >UniRef50_A5G1U8 DEAD/DEAH box helicase domain protein n=7 Tax=Alphaproteobacteria RepID=A5G1U8_ACICJ Length = 525 Score = 562 bits (1450), Expect = e-159, Method: Composition-based stats. Identities = 197/412 (47%), Positives = 262/412 (63%), Gaps = 12/412 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +LGL+ +LRA++EQ Y PTPIQ ++IP +LEG DL+ AQTGTGKTA F LP+L Sbjct: 59 FTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAAFVLPILHR 118 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + + R RAL+L PTRELA QI + R Y K+ VV GG PQ ++ Sbjct: 119 IAANRAR-PAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKPGPQARRM 177 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 GVD+LVATPGRLLD ++LD VE +VLDEAD+MLD+GFI IR+++ KLP +RQ Sbjct: 178 ESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMAKLPRQRQ 237 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 ++FSAT I+ALA + L +P E+ V+ + D++ Q V + + K++ L+ ++ Sbjct: 238 AVMFSATMPKPIRALAGEFLRDPREVAVSVESKPVDRIDQQVLLLAPEEKKDKLAWLLAD 297 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 ++ +VFTRTKHGA+ + L GI +AAIHGNKSQG R RAL F+SG IRVLVAT Sbjct: 298 VAVERAIVFTRTKHGADKVTRHLEDAGIGAAAIHGNKSQGQRERALDQFRSGRIRVLVAT 357 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 DIAARG+D++ + HVVN+ELPNVPE YVHRIGRT RA A G A+SLV E LRDIE Sbjct: 358 DIAARGIDVDNVSHVVNFELPNVPESYVHRIGRTARAGAEGVAISLVEPSELPYLRDIET 417 Query: 363 LLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE 414 L+ + + +PG A+P++ R Q +GQ R G Sbjct: 418 LIGRHL----VPG-------GAQPVRGLAPPHLLRARNQVARQGQMPKRNGP 458 >UniRef50_Q11UP8 ATP-dependent RNA helicase (Cold-shock DEAD-box protein A) n=2 Tax=Bacteria RepID=Q11UP8_CYTH3 Length = 580 Score = 562 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 153/389 (39%), Positives = 233/389 (59%), Gaps = 7/389 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F LGLSP+++ A+ GY E TPIQ++ IP ++ G+DL AQTGTGKTA F +P + Sbjct: 1 MLFKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAI 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 +H+ ++LIL PTRELA Q+ ++ SK+ +R L V+GG SI Q+ Sbjct: 61 EHVDI------SINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQI 114 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ G ++V TPGR++D + + + ++LDEAD ML+MGF DI +LT+LP Sbjct: 115 RDLKAGAHIVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLNMGFREDIELILTRLPE 174 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ +LFSAT + I ALA++ +NP I++ R+ V Q + V +K E+++ + Sbjct: 175 ERQTVLFSATLAPPILALAKRFQNNPEIIKIERKELTISTVEQFYYLVKNSQKTEIVTQI 234 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I N Q +L+F TK + ++L G ++HG+K+Q RT ++ F+ G +L Sbjct: 235 IDLNNLQLMLIFCNTKRKVEEVTDELKAYGHNPISLHGDKTQRDRTEVMSKFRKGLANIL 294 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+ + V+NY++P E+YVHRIGRTGRA G++ +LV DE LRD Sbjct: 295 VATDVAARGIDVTGVDAVINYDVPLDIENYVHRIGRTGRAGQLGKSFTLVTSDEKYKLRD 354 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQ 388 IE+ K I + P + + K + + Sbjct: 355 IERYTKATIEKAETPTRQELVAYKKDKLA 383 >UniRef50_P24346 Putative ATP-dependent RNA helicase an3 n=63 Tax=Eukaryota RepID=DDX3_XENLA Length = 697 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 161/425 (37%), Positives = 236/425 (55%), Gaps = 19/425 (4%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF + + I+ + Y PTP+Q+ AIP ++E RDLMA AQTG+GKTA F LP+L Sbjct: 222 SFHDVTMGEIIMGNIQLTRYTRPTPVQKHAIPIIIEKRDLMACAQTGSGKTAAFLLPILS 281 Query: 62 HLITRQP------------HAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVV 109 + P + + ++ +L+L PTRELA QI E R ++ +R VV Sbjct: 282 QIYADGPGDAMKHLQENGRYGRRKQFPLSLVLAPTRELAVQIYEEARKFAYRSRVRPCVV 341 Query: 110 FGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHD 169 +GG I Q+ L G +LVATPGRL+D+ + + LD + LVLDEADRMLDMGF Sbjct: 342 YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ 401 Query: 170 IRRVLTK--LPAK--RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVH 225 IRR++ + +P K RQ ++FSATF +I+ LA L + + V R + S+ +TQ V Sbjct: 402 IRRIVEQDTMPPKGVRQTMMFSATFPKEIQILARDFLDEYIFLAVGRVGSTSENITQKVV 461 Query: 226 FVDKKRKRELLSHMIGKGNWQQ-VLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGAR 284 +V++ KR L ++ LVF TK GA+ L + L +G +IHG++SQ R Sbjct: 462 WVEEMDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDR 521 Query: 285 TRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGE 344 AL F+SG +LVAT +AARGLDI + HV+N++LP+ E+YVHRIGRTGR G Sbjct: 522 EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL 581 Query: 345 ALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGG 404 A S + +D+ LL + + +P + + + + + R + G G Sbjct: 582 ATSFFNEKNINITKDLLDLLVEA--KQEVPSWLENMAYEQHHKSSSRGRSKSRFSGGFGA 639 Query: 405 RGQQQ 409 + +Q Sbjct: 640 KDYRQ 644 >UniRef50_D0MZ17 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MZ17_PHYIN Length = 2091 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 159/454 (35%), Positives = 241/454 (53%), Gaps = 12/454 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 + G S +L+ + + GY EP IQ+QA+PA++ GRD++ A+TG+GKT F LP+ +H Sbjct: 1492 WTQCGFSVRMLQLIKKHGYEEPFAIQKQALPAIMSGRDVIGIAKTGSGKTLAFLLPMFRH 1551 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 ++ + P + P+ +I+ P RELA QI R +SK L +R+ V+GG S++ Q+ L Sbjct: 1552 VLAQPPLQENEGPI-GIIMAPARELAQQIYVEARKFSKGLGLRATAVYGGSSVSEQIANL 1610 Query: 123 RGGVDVLVATPGRLLDLEHQ---NAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 + G D+++ TPGR++D+ V L +V +VLDEADRM DMGF I +++ + Sbjct: 1611 KRGSDIVICTPGRMIDILCMSAGKMVSLQRVTYVVLDEADRMFDMGFEPQITKIMMNIRP 1670 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ LLFSATF +++LA K+L P+EI V R+TAS +TQ+V ++ K L + Sbjct: 1671 DRQTLLFSATFPRSVESLARKVLKKPVEITVGTRSTASGDITQYVEVREEDDKFMRLLQL 1730 Query: 240 IGK-GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 +G +LVF + + + + L K G + ++HG K Q R + DFK V Sbjct: 1731 LGLWYEKGNILVFVNKQQACDQIFQDLMKAGYPALSLHGGKDQVDRDYTIDDFKRKVRTV 1790 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 +VAT +A RGLD+++L V+NY PN EDYVHR+GRTGRA G A + + DE + Sbjct: 1791 MVATSVAGRGLDVKDLVLVINYHCPNHMEDYVHRVGRTGRAGRKGTAYTFISPDEEEYSV 1850 Query: 359 DIEKLL---KKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG 415 D+ K L K+ IP P ++ G + G G G + R Sbjct: 1851 DLVKALENAKQTIP----PELTALAEGFTAKVKRGEARYHGSGFKGKGFTFDETERNETQ 1906 Query: 416 GAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRK 449 + E L + A + P K Sbjct: 1907 RTADLQRRQYELDQGILVEDSGAVDDDDMEEPSK 1940 >UniRef50_UPI0000E87E35 putative ATP-dependent RNA helicase protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87E35 Length = 427 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 171/430 (39%), Positives = 264/430 (61%), Gaps = 7/430 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF + L IL+A+ E GY +PTPIQ ++IP ++ + ++ASAQTGTGKTA F LP+L Sbjct: 1 MSFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + +G R LI++PTRELA QI ++++ YS+YL I S+ + GG+S Q Sbjct: 61 DKLTKNRSEGRG---PRVLIVSPTRELATQITDSIKKYSRYLRINSITITGGISYGLQNR 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +D+LVATPGRLLDL Q + +E+++LDEADRMLDMGF+ DIR++ K Sbjct: 118 MFSKPIDILVATPGRLLDLYQQKKINFKGLEVMILDEADRMLDMGFVPDIRKIYNATSKK 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVD-KKRKRELLSHM 239 +Q L+FSATF I+ +A++ L NP+ I + + + Q ++F D + K+++L H Sbjct: 178 QQMLMFSATFDPPIQKIAQEFLTNPVTISIKPDVSGHKNIKQLIYFADNQSHKQQMLDHF 237 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I Q ++FT TK A+ L++QL I+++A+HG+ SQG+RT+ + FK + ++L Sbjct: 238 IKNDEVTQAIIFTATKRMADQLSDQLYHSDIKTSALHGDMSQGSRTKTINRFKRNETKIL 297 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+A+RG+D++ + HV NY++P EDY+HRIGRTGRA G A+SLV + + LR Sbjct: 298 VATDLASRGIDVKNISHVFNYDMPRFAEDYIHRIGRTGRANNKGIAISLVSPTDREFLRK 357 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRG---QGGGRGQQQPRRGEGG 416 IE+ +I +IPG E +A+ + + R +G + +++ R Sbjct: 358 IERFTNLKIEIASIPGMEATILKEAKAPKRKSKGRSFVKKGKVFKNEANAKKRIRSKPVF 417 Query: 417 AKSASAKPAE 426 K+ + P+ Sbjct: 418 GKTNQSAPSR 427 >UniRef50_B7PA03 ATP-dependent helicase (DEAD box), putative n=1 Tax=Ixodes scapularis RepID=B7PA03_IXOSC Length = 685 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 152/468 (32%), Positives = 231/468 (49%), Gaps = 37/468 (7%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F ++ + Q Y PT IQ Q P L GRD++ AQTG+GKT + LP + Sbjct: 115 LTFQEGCFPDYCMKMIETQNYTTPTAIQSQGWPIALSGRDMVGIAQTGSGKTLAYILPAI 174 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + +G P+ AL+L PTRELA QI + D+ K IR+ VFGG Q+ Sbjct: 175 VHITHQPYLQRGDGPM-ALVLAPTRELAQQIQQVAADFGKASRIRNTCVFGGAPKGSQLR 233 Query: 121 ------KL-------------------RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVL 155 L R GV++ +ATPGRL+D V L + LVL Sbjct: 234 DWREFGALCPASVAVVQRNSQVIVVICRAGVEICIATPGRLIDFLEAGKVNLRRCTYLVL 293 Query: 156 DEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNT 215 DEADRMLDMGF IR+++ ++ Q L++SAT+ ++++LAE L + +++ + Sbjct: 294 DEADRMLDMGFEPQIRKIVEQIRPDCQTLMWSATWPKEVRSLAEDFLKDYIQVNIGALQL 353 Query: 216 -ASDQVTQHVHFVDKKRKRELLSHM---IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIR 271 A+ ++ Q V + K L + I + L+F TK + L ++ ++G Sbjct: 354 CANHRIVQIVDVCQESDKENKLMELHKEIINEQDNKTLIFAETKKKVDELTRRMRRNGWP 413 Query: 272 SAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVH 331 S IHG+KSQ R L +F+SG +LVATD+AARGLD++++ V+NY+ P+ EDY+H Sbjct: 414 SICIHGDKSQSERDWVLNEFRSGRSPILVATDVAARGLDVDDIRFVINYDYPHCSEDYIH 473 Query: 332 RIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGR 391 RIGRT R+ TG A + K +++ +LK+ I +E A +N Sbjct: 474 RIGRTARSNKTGTAYTFFTPGNMKQAKELIAVLKEANQAINPKLFEI-----ANMARNNS 528 Query: 392 QQRGGGGRGQGGGRGQQQP--RRGEGGAKSASAKPAEKPSRRLGDAKP 437 G + Q+P R G S + + P G KP Sbjct: 529 YGGGRNSESLPPYKLLQEPWGRESMQGTGPPSYQRSPAPQNGYGGPKP 576 >UniRef50_A0Z0M4 ATP-dependent RNA helicase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z0M4_9GAMM Length = 582 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 175/473 (36%), Positives = 252/473 (53%), Gaps = 29/473 (6%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F+SLGL + + GY TPIQ IP +LEGRD++ AQTGTGKTA F LP+L + Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMMK 121 + + R +AL+L PTRELA Q+ E R Y + + +R L +FGG + Q+ Sbjct: 71 IDVK------VRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKS 124 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR G ++VATPGRLLD + ++ L + +VLDEAD ML MGFI D+ +L K P +R Sbjct: 125 LREGTHIVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFIDDVDTILAKTPKER 184 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 + LFSAT ++ +A K L NP EI VA T ++ + Q K E L ++ Sbjct: 185 KVALFSATMPKRVRDIANKHLSNPAEISVAAAATTNENIEQCYWLAKGASKLEALKRLLA 244 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + + V+VFTRT+ +AEQL + G++++ ++G+ Q R R ++D KSG + VLVA Sbjct: 245 FEDTEGVIVFTRTRESTTVIAEQLRQTGLKASPLNGDMDQKMRLRTVSDLKSGALDVLVA 304 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + HV+NY++P E YVHRIGRTGRA G+A+ V E ++LR+IE Sbjct: 305 TDVAARGLDVERITHVINYDVPFDEEAYVHRIGRTGRAGRKGKAILFVVPRERRMLRNIE 364 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQ----------------------NGRQQRGGGGR 399 +L ++ IP I +P + + E N Sbjct: 365 RLTRQSIPEIKLPSVLAIDAKRREAFADSIRTALADPMQAELEEIIDTLNKDSDYRSIAV 424 Query: 400 GQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAA 452 G +G AK P R + ++RR+ +K AA Sbjct: 425 ALAGMLHSPGASKGPKHAKGEKHTPYGTRDARDEKSSKPNRKERRQGLQKKAA 477 >UniRef50_Q17KA8 DEAD box ATP-dependent RNA helicase n=4 Tax=Eukaryota RepID=Q17KA8_AEDAE Length = 718 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 142/448 (31%), Positives = 235/448 (52%), Gaps = 7/448 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F G L + QG++EPT IQ + GRD++ A+TG+GKT + LP L Sbjct: 101 MQFGESGFPSVFLDEMGRQGFQEPTSIQAVGWSIAMSGRDMVGIAKTGSGKTLAYILPAL 160 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + +G P+ AL+L PTRELA QI + D+ + ++I + +FGG S +PQ Sbjct: 161 IHISNQPRLLRGDGPI-ALVLAPTRELAQQIQQVCNDFGRRMSIMNTCIFGGASKHPQAD 219 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR GV++++ATPGRL+D L + LVLDEADRMLDMGF IR++++++ Sbjct: 220 DLRRGVEIVIATPGRLIDFLESGTTNLRRTTYLVLDEADRMLDMGFEPQIRKIISQIRPD 279 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 RQ L++SAT+ +I+ LAE+ L ++I + N A++ + Q + ++ K L + Sbjct: 280 RQVLMWSATWPKEIRKLAEEFLREYIQINIGSLNLAANENIMQIIECCEEYEKETRLFKL 339 Query: 240 IGK---GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 + + + ++F TK + + + ++G R IHG+K+Q R L F+ Sbjct: 340 LTELSQQGDSKSIIFVETKRKVDQITNVIKRNGWRCDGIHGDKTQKDRDYVLNTFRRLRS 399 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 +LVATD+A+RGLD++++ +V+N++ PN EDY+HRIGRTGR+ G + + Sbjct: 400 GILVATDVASRGLDVDDVKYVINFDFPNNTEDYIHRIGRTGRSTNKGTSYTFFTPANGAK 459 Query: 357 LRDIEKLLKKEIPRI--AIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE 414 D+ +L++ + + Y + GGG + + G+G++ Sbjct: 460 AGDLIGVLREANQFVNPELEQYARSGGRNRSGGRGRYGGGGGGRQMRNDGKGRRGDDYRS 519 Query: 415 GGAKSASAKPAEKPSRRLGDAKPAGEQQ 442 G K A + G+ G + Sbjct: 520 GNGDDRGPKFARRDDYGSGNRNDYGSRN 547 >UniRef50_C6Q9Z2 DEAD/DEAH box helicase domain protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6Q9Z2_9RHIZ Length = 657 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 190/449 (42%), Positives = 264/449 (58%), Gaps = 6/449 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F++ G + + RA+ + GY PTPIQ QA+P LEGRDL+ A+TG+GKTA F LPLLQ Sbjct: 27 NFEAFGFAEPLSRALTQCGYVTPTPIQVQALPPQLEGRDLLGMAETGSGKTATFVLPLLQ 86 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + ++ + V AL+L PTRELA QI + V ++ + IR VV GGVS PQ+ Sbjct: 87 KIASQN-SEPAPKQVLALVLAPTRELAIQIDQEVASLARNMRIRRAVVLGGVSKGPQINA 145 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV VLVATPGRLLDL + L +VE LVLDEADRM DMGFI DI++++ LP R Sbjct: 146 LKRGVHVLVATPGRLLDLINMRTCDLSRVETLVLDEADRMFDMGFIRDIKKIVAMLPEAR 205 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 + LFSAT +IK A +L P ++++ ++ D++ Q V V K+ L ++ Sbjct: 206 RTALFSATMPVEIKKFAYDILKEPYRVDLSSKSVVVDRIDQKVMIVRTTEKQSRLHTILA 265 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 ++V+VFTRTK GA+ +AE+L GI ++A HGNK+Q AR RAL DF G IRVLVA Sbjct: 266 DEACKRVIVFTRTKRGADRVAERLGMAGISASAFHGNKAQNARQRALNDFMMGHIRVLVA 325 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TDIAARG+D+ + HVVN+++P PE YVHR+GRT R +G A+SL E + + IE Sbjct: 326 TDIAARGIDVSNITHVVNFDMPLDPETYVHRVGRTARKGNSGIAISLCDPGERQEITAIE 385 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSAS 421 +++K+++ IA G E P + + R G + G R G + Sbjct: 386 RMMKQKLEVIADVGGEALP-----MPERRQHHRAETGPRRDGDRQHHHAGGRRDGREGGQ 440 Query: 422 AKPAEKPSRRLGDAKPAGEQQRRRRPRKP 450 R GD + R R+P Sbjct: 441 RGERPARPHRNGDERANASPARNGENRRP 469 >UniRef50_B2UL73 DEAD/DEAH box helicase domain protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UL73_AKKM8 Length = 423 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 189/422 (44%), Positives = 270/422 (63%), Gaps = 7/422 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS ILR + Y+ PTPIQ IP +L+ +DLM AQTGTGKTA F LPL+Q Sbjct: 5 TFRELGLSAPILRQLENLEYKTPTPIQAACIPLLLQNKDLMGLAQTGTGKTAAFALPLIQ 64 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L R GRR VRALIL+PTRELAAQI EN+R Y++ L++ + V+FGGV Q + Sbjct: 65 QLSERSGKPPGRR-VRALILSPTRELAAQIHENIRAYARGLHLSTAVIFGGVGYASQFKE 123 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GG+D+LVATPGRL+D + V LD VE L+LDEAD MLDMGF ++++++K+P KR Sbjct: 124 LAGGLDILVATPGRLIDHLERRTVSLDGVETLILDEADHMLDMGFAPALKKIVSKIPRKR 183 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFV-DKKRKRELLSHMI 240 +FSAT D+I+ LA+ LL P + V+ ++ +D+V Q + V + KR L ++ Sbjct: 184 HTQMFSATMPDNIRQLAQTLLQKPETVRVSPPSSTADRVEQFLCMVGSQSEKRLLTLELL 243 Query: 241 GKGN-WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + L+FTRT+HGA+ LA L+ ++AIHG+KSQG R R L +F+SG VL Sbjct: 244 KQQELPGRTLIFTRTRHGADRLASFLSGKDYPASAIHGDKSQGRRERMLREFRSGKTPVL 303 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARG+D++++ V+NY+LP PE YVHRIGRT RA A G+A++L +E + R+ Sbjct: 304 VATDIAARGIDVKDVRLVINYDLPEEPEVYVHRIGRTARAGAAGQAIALCSPEEIRKARN 363 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKS 419 + KLL + +P + + + R++R + + +++PR+G G S Sbjct: 364 VHKLLGRLLP---VHASSASVPAELRAVPEARRKRSSPMQEKRSA-PRREPRKGYGRNGS 419 Query: 420 AS 421 + Sbjct: 420 RA 421 >UniRef50_P19109 ATP-dependent RNA helicase p62 n=11 Tax=Eukaryota RepID=DDX17_DROME Length = 719 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 139/381 (36%), Positives = 221/381 (58%), Gaps = 8/381 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F + L +++ + QGY+ PT IQ Q P + G + + A+TG+GKT G+ LP + H Sbjct: 283 FSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVH 342 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + +QP +G P+ AL+L PTRELA QI + ++ +R+ VFGG QM L Sbjct: 343 INNQQPLQRGDGPI-ALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDL 401 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 + G ++++ATPGRL+D + L + LVLDEADRMLDMGF IR++++++ RQ Sbjct: 402 QRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 461 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMIG 241 L++SAT+ ++K LAE L N ++I + +A+ + Q V D+ K E L ++ Sbjct: 462 TLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLS 521 Query: 242 K-----GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 + ++++F TK ++L + G+R AIHG+KSQ R L +F+SG Sbjct: 522 DIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKS 581 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 +LVATD+AARGLD++ + +V+N++ P EDY+HRIGRTGR+ G + + + K Sbjct: 582 NILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQ 641 Query: 357 LRDIEKLLKKEIPRIAIPGYE 377 + + +L++ I P E Sbjct: 642 AKALVDVLREANQEIN-PALE 661 >UniRef50_D1INE6 Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) n=7 Tax=Eukaryota RepID=D1INE6_VITVI Length = 1180 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 162/440 (36%), Positives = 240/440 (54%), Gaps = 7/440 (1%) Query: 12 ILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAK 71 +L V G+ PTPIQ Q+ P L+ RD++A A+TG+GKT G+ +P HL ++ Sbjct: 33 LLFQVYSAGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHL--KRIRNN 90 Query: 72 GRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVA 131 + L+L+PTRELA QI + + + + ++GG PQ+ L G D++VA Sbjct: 91 PQMGPTVLVLSPTRELATQIQDEAVKFGRSSRLSCTCLYGGAPKGPQLRDLDRGADIVVA 150 Query: 132 TPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFS 191 TPGRL D+ V L QV LVLDEADRMLDMGF IR+++ ++PA+RQ L+++AT+ Sbjct: 151 TPGRLNDILEMRRVSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWP 210 Query: 192 DDIKALAEKLLHNPLEIEVARRN--TASDQVTQHVHFVDKKRKRELLSHMIGKGNWQ-QV 248 +++ +A LL NP+++ + + A+ +TQ+V + K + L ++ ++ Sbjct: 211 KEVRKIAADLLVNPVQVNIGNVDELVANKAITQYVEVLPYMEKHKRLEQILRSQEPGSKI 270 Query: 249 LVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARG 308 ++F TK + LA L + +AAIHG+KSQG R L F++G VLVATD+AARG Sbjct: 271 IIFCSTKKMCDQLARNLTRP-FGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARG 329 Query: 309 LDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEI 368 LDI+++ V+NY+ P EDYVHRIGRTGRA ATG A + + K D+ K+L+ Sbjct: 330 LDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLEGAN 389 Query: 369 PRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKP 428 R+ P S ++ R G GGR G G G G + Sbjct: 390 QRVP-PEIRDMASRGGGMGRSRRWGSGTGGRDGGRGGRNDSSYGGRDGGRGGWGMAPSSS 448 Query: 429 SRRLGDAKPAGEQQRRRRPR 448 SR +Q +R R R Sbjct: 449 SRLERGGGRGADQDQRDRDR 468 >UniRef50_Q0G0P8 Superfamily II DNA and RNA helicase n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G0P8_9RHIZ Length = 457 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 193/440 (43%), Positives = 267/440 (60%), Gaps = 5/440 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD GL+ + RA+A PTPIQ++AIP L GRD++ AQTGTGKTA F LPLL Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 HL+T R +ALIL+PTRELA QI E++ D S+ I VVFGGVS+ PQ+ Sbjct: 65 HLMTVGGKPTTR-TTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQA 123 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GVD+LVATPGRLLDL Q A+ L + L+LDEADRMLDMGF+ D+ +++ K P R Sbjct: 124 LARGVDILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGKCPDDR 183 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q+++FSAT I+ L++K+L NP ++ V +++ Q V V ++ K+ L + Sbjct: 184 QSMMFSATMPKPIEDLSKKILTNPQKVSVTPAVVTVEKIAQSVFSVPQRAKKHWLIDFVS 243 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 K + +++VFTRTKHGAN L L+K GI++ AIHGNKSQ AR +AL F+ G+I VLVA Sbjct: 244 KNDTGRIVVFTRTKHGANRLTSDLDKAGIQALAIHGNKSQTARQKALGAFQDGEIDVLVA 303 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TDI ARG+ ++++ HVVN++LP PE YVHRIGRT RA +G+A++LV E L+ I Sbjct: 304 TDIVARGIHVDDISHVVNFDLPEEPESYVHRIGRTARAGRSGQAIALVDPSERAKLKQII 363 Query: 362 KLLKKEIPRIA----IPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 KL ++ A + + + R Q+ GR + G+ R G Sbjct: 364 KLTGIDLTPQATDYTVNVLAGELDADDGKRRGPRNQQPRNGRPRNRGKNGNGGRPNGGAK 423 Query: 418 KSASAKPAEKPSRRLGDAKP 437 + + S + KP Sbjct: 424 RQNAGGETANRSSQRPSGKP 443 >UniRef50_Q7UJ92 Putative ATP-dependent RNA helicase rhlE n=1 Tax=Rhodopirellula baltica RepID=Q7UJ92_RHOBA Length = 485 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 192/394 (48%), Positives = 260/394 (65%), Gaps = 11/394 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F+ LGL+ +L+ + + GY PTPIQ Q+IP +L+G D++ +AQTGTGKTA F LP+LQ Sbjct: 4 FEDLGLTGPLLQGLEQAGYETPTPIQAQSIPEILDGNDVLGAAQTGTGKTAAFALPILQI 63 Query: 63 LITRQPHAKGR----------RPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGG 112 + + RP+R L+L+PTREL+AQI N R Y K +RS V+FGG Sbjct: 64 MWEDDQERREPSKRRGGRPGRRPIRTLVLSPTRELSAQIEANFRIYGKKTRLRSTVIFGG 123 Query: 113 VSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRR 172 V+ NPQ+ +L+ GVD LVATPGRLLDL +Q + L VEILVLDEAD MLDMGF+ D++R Sbjct: 124 VNQNPQVRELQSGVDTLVATPGRLLDLVNQGFIDLKDVEILVLDEADHMLDMGFLPDVKR 183 Query: 173 VLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRK 232 +L LP RQNLLFSAT I+ LA+++L +P+ I++A + +++ Q + FV + K Sbjct: 184 ILKFLPRDRQNLLFSATMPGPIRKLADEILVDPVTIQIAPQKPTVERIEQSICFVAQADK 243 Query: 233 RELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFK 292 LL+H I LVFTRTKHGA+ +A +L K G+++AAIHGNK+Q R R L FK Sbjct: 244 PRLLNHFIETKATGSTLVFTRTKHGADAVARRLVKAGVKAAAIHGNKTQANRVRTLNKFK 303 Query: 293 SGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVD 352 + ++ VLVATD+AARG+DI+ + V+NY+ PN PE YVHRIGRTGRA GE + Sbjct: 304 NDELDVLVATDVAARGIDIDGIQTVINYDTPNTPEAYVHRIGRTGRAGREGETVMFCGGH 363 Query: 353 EHKLLRDIEKLLKKEIPRIA-IPGYEPDPSIKAE 385 E K IE+ +K +IP +PG +P P E Sbjct: 364 ETKFFIAIEREIKLQIPVATGLPGCQPRPLQDPE 397 >UniRef50_C6E4K1 DEAD/DEAH box helicase domain protein n=9 Tax=Proteobacteria RepID=C6E4K1_GEOSM Length = 490 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 162/444 (36%), Positives = 246/444 (55%), Gaps = 8/444 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L + ++ + + E G+ + TPIQ++A+P L G+D+ AQTGTGKTA F + + Sbjct: 1 MKFTELKIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIF 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L+++ G RALIL PTREL QI ++ + KY ++GGV Q Sbjct: 61 TKLLSQAKTG-GEHHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRD 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA- 179 L+ G D+++ TPGRL+D Q + VE LV+DEADRM DMGFI D+R +L +LP Sbjct: 120 ALKAGADIVIGTPGRLIDYLKQKVYSVKDVEALVIDEADRMFDMGFIADLRFILRRLPPY 179 Query: 180 -KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 KRQNLLFSAT + + LA + ++ P ++ V +++V Q ++ V +K K LL Sbjct: 180 DKRQNLLFSATLNTRVMELAYEFMNMPEKVSVTPEQMTAERVEQVLYHVSRKEKFPLLLG 239 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ K ++ ++F TK A +L ++LN + I G+ Q R + LADFK G + + Sbjct: 240 LLRKMGMERTMIFVNTKREAEYLQDRLNANEFPGKVISGDVEQRKRMKILADFKDGTLPI 299 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 ++ATD+A+RG+ IE + HV+NY+LP EDYVHRIGRT RA A G A+S D + Sbjct: 300 MIATDVASRGIHIEGVSHVINYDLPQDCEDYVHRIGRTARAGAEGMAISFADEDGAFYIE 359 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAK 418 IE +K++I P + + + + + GG+ + R G+ G Sbjct: 360 PIEDFIKQKI-----PTEWAEDDMFVHDYKRTKPRPRTELPHGRGGKPGDRGRSGDKGRP 414 Query: 419 SASAKPAEKPSRRLGDAKPAGEQQ 442 +PA + G KPAGE++ Sbjct: 415 GDKGRPAGRSRSASGSDKPAGEKK 438 >UniRef50_A8IAJ3 Helicase n=4 Tax=Alphaproteobacteria RepID=A8IAJ3_AZOC5 Length = 582 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 206/491 (41%), Positives = 269/491 (54%), Gaps = 42/491 (8%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF LGLS +L AVA GY PTPIQ QAIP VL RD++ AQTGTGKTA FTLP+L Sbjct: 64 MSFSELGLSEKVLSAVAATGYTTPTPIQAQAIPHVLARRDVLGLAQTGTGKTAAFTLPML 123 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + A R R LIL PTRELAAQ+ EN Y K + ++ GGVS Q Sbjct: 124 TLLEQGRARA---RMPRTLILEPTRELAAQVEENFVRYGKNHKLNVALLIGGVSFGDQDT 180 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL GVDVL+ATPGRLLD + + L +E+LV+DEADRMLDMGFI DI R+ +P Sbjct: 181 KLLRGVDVLIATPGRLLDHVERGRLLLSGIEVLVIDEADRMLDMGFIPDIERICKLVPFT 240 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKR--KRELLSH 238 RQ L FSAT +I+ L + L NP+ +EV++ +A+ +TQ + ++ KRE L Sbjct: 241 RQTLFFSATMPPEIQRLVSQFLSNPVRVEVSKPASANTSITQLLVASGREDYEKRETLRE 300 Query: 239 MIGKGNW-QQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 +I + Q +VF K + L K G +HG+ Q ART+AL F++G+ Sbjct: 301 LIRNADQLQNGIVFCNRKRDVAVVHRSLQKHGFNVVCLHGDMDQHARTQALDQFRTGEAT 360 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVA+D+AARGLDI + HV NY++P+ EDYVHRIGRTGRA TG A+ LV D+ K L Sbjct: 361 LLVASDVAARGLDIPAVSHVFNYDVPHHSEDYVHRIGRTGRAGRTGTAIMLVTHDDAKSL 420 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKA---------EPIQNGRQQRGGGGRGQGGG---- 404 IEKL+ IP P E P K ++ R +R G GR + Sbjct: 421 AAIEKLIGNAIPWQGEPLGEAPPREKRSRGGDRREERGERSERNKRSGRGRSERKAEVED 480 Query: 405 ----RGQQQPRRGEG------------------GAKSASAKPAEKPSRRLGDAKPAGEQQ 442 R ++ PR A+P E+ +R +A+P GE+ Sbjct: 481 GVEVRAERAPRPAREGRPEREPRPEREPRAERQPRPEREARP-EREARPEREARPEGERA 539 Query: 443 RRRRPRKPAAA 453 R+ RP AA Sbjct: 540 RKPRPETADAA 550 >UniRef50_A8REA9 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8REA9_9FIRM Length = 572 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 137/378 (36%), Positives = 233/378 (61%), Gaps = 10/378 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ L +S ILRAV+E GY + T IQ +AIP ++EG+D++ + TGTGKTA F +P ++ Sbjct: 3 TFNELHISEAILRAVSEMGYEQATEIQAKAIPYIMEGKDVLGRSNTGTGKTAAFGIPAIE 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 + + +A ALI+ PTREL Q+ +R +SKY ++ + ++GG I Q+ Sbjct: 63 MVQPQDKYAN------ALIICPTRELVTQVAMELRKFSKYKEGVKIVPIYGGQPIERQIQ 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ G ++V TPGR++D + +KL + +++LDEAD ML+MGF DI +L+ +P++ Sbjct: 117 LLKRGCGIVVGTPGRIMDHLRRRTLKLSDIRMVILDEADEMLNMGFKEDIEEILSLMPSE 176 Query: 181 R--QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 R Q +LFSAT+ +I +A++ ++P+ +E+ D V Q + V + +K L Sbjct: 177 RSYQTILFSATWPSEIMRIAKEFQNDPVTVEIKSAQRTIDTVEQLYYEVPRGKKANALRV 236 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + + ++F TK + L +LNK I++ A+HG+ Q R+R + F+SG + + Sbjct: 237 LLNHYDPELCMIFANTKKMVDELQGELNKHDIKACALHGDMKQEFRSRVMEQFRSGSMPI 296 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC-VDEHKLL 357 L+ATD+AARG+D++++ V+N+++P E Y+HRIGRTGRA G A++L+ + L Sbjct: 297 LIATDVAARGIDVDDVDLVINFDIPQDNEYYIHRIGRTGRAGKKGLAITLISGGRQRSEL 356 Query: 358 RDIEKLLKKEIPRIAIPG 375 ++I + K I A+P Sbjct: 357 KNIMRYTKTNIKHHALPT 374 >UniRef50_A5FST0 DEAD/DEAH box helicase domain protein n=5 Tax=Dehalococcoides RepID=A5FST0_DEHSB Length = 561 Score = 560 bits (1445), Expect = e-158, Method: Composition-based stats. Identities = 181/452 (40%), Positives = 265/452 (58%), Gaps = 12/452 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF+S P ++ V GY+EPTPIQ QAIP ++ G D++ AQTGTGKTA + LP++ Sbjct: 1 MSFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPII 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q +++ R VR L++ PTRELA QI ++ R + IR ++GGV+++ Q+ Sbjct: 61 QKMLSTP-----RGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIR 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +LR GVDV+VA PGRLLD + + + VE L++DEADRM DMGF DI+ +L L Sbjct: 116 RLRSGVDVVVACPGRLLDHIWRGTIDVCGVETLIIDEADRMFDMGFQPDIQSILKCLVQP 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT +++ L + NP+ ++V ++ S V+ V +K LL ++ Sbjct: 176 HQTLLFSATMPPEVRKLTLETQTNPVTVQVGTQSPVSSVSH-SVYPVKSHQKTPLLLEIL 234 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + VL+F RTK+GA +LA++++K G +A++ GN SQ R + F+ G+ ++LV Sbjct: 235 KTVETKSVLIFARTKYGAENLADEISKAGFTTASLQGNLSQNRRHAVMEGFRRGNFKILV 294 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARGLDI+ + HV+NY++P+ PEDY HRIGRTGR TG+A SLV + ++RDI Sbjct: 295 ATDIAARGLDIDHISHVINYDMPDSPEDYTHRIGRTGRFDRTGQAFSLVTGRDGDMVRDI 354 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 ++LL I R+ + G+ D + QN Q+R R G +P S Sbjct: 355 QRLLSSPIQRLRVDGF--DYATTRNDGQNQSQRRDFAPRRGYSHGGYNRPEM-AVNETSQ 411 Query: 421 SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAA 452 + P+E P A+P R RP A Sbjct: 412 TDTPSEMPVS---PARPFNPGFRPSRPANSAP 440 >UniRef50_B3M5L4 GF23818 n=1 Tax=Drosophila ananassae RepID=B3M5L4_DROAN Length = 795 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 150/417 (35%), Positives = 221/417 (52%), Gaps = 5/417 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF G +L+AV + Y +PTPIQ QA+P L GRD++ A+TG+GKTA F PLL Sbjct: 266 SFGHFGFDEPLLKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPLLM 325 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 HL+ ++ G P+ LIL PTREL+ QI + + K N+ + +GG S Q Sbjct: 326 HLMDQKELQPGDGPI-GLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKA 384 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L G +++VATPGR++D+ A L +V LVLDEADRM MGF +R + + R Sbjct: 385 LEQGAEIVVATPGRMIDMVKMKATNLKRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDR 444 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK--KRKRELLSHM 239 Q LLFSATF I+ LA +L +P+ I N A+ +TQ V ++ LL H+ Sbjct: 445 QTLLFSATFKKRIERLARDVLTDPVRIVQGDLNEANQDITQSVFVFPNPLQKWNWLLCHL 504 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + VL+F K A +A L +HG+ Q R + + FK + +L Sbjct: 505 VKFLSEGSVLIFVTKKADAETVANNLLVKEYNCLLLHGDMDQADRNKVITQFKKKECDIL 564 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLDI + +VVNY++ + + HRIGRTGRA G A +LV + + Sbjct: 565 VATDVAARGLDIPHIRNVVNYDIARDIDTHTHRIGRTGRAGEKGNAFTLVTDKDKEFAGH 624 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 + + L+ +P + ++K+ ++ R ++G G + G RG G Sbjct: 625 LVRNLEGA--DQQVPEDLMELAMKSSWFRSSRFKQGKGRKPANTYTGLGYRERGNGP 679 >UniRef50_D1I3Q7 Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1I3Q7_VITVI Length = 916 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 157/383 (40%), Positives = 226/383 (59%), Gaps = 13/383 (3%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F + L + + + Y +PTPIQ+ AIP + GRDLMA AQTG+GKTA F P++ Sbjct: 423 FAEIHLGEGLNQNIRRCKYVKPTPIQRHAIPIAMAGRDLMACAQTGSGKTAAFCFPIICG 482 Query: 63 LITRQPHAKGRR--PVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 ++ Q G R ALIL+PTREL+ QI E + +S ++ +V +GG I+ Q Sbjct: 483 ILRNQLSRGGARLACPTALILSPTRELSCQIHEEAKKFSYKTGLKVVVAYGGAPISQQFR 542 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL--- 177 L GVD+LVATPGRL+D+ + V L ++ L LDEADRMLDMGF IR+++ ++ Sbjct: 543 NLERGVDILVATPGRLVDMIERARVSLRMIKYLALDEADRMLDMGFEPQIRKIVEQMDMP 602 Query: 178 -PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELL 236 P RQ +LFSATF ++I+ LA L N + + V R +++D + Q V FV+ KR L Sbjct: 603 PPGARQTMLFSATFPNEIQRLAADFLSNYIFLSVGRVGSSTDLIVQRVEFVEDTDKRYHL 662 Query: 237 SHMIGKGNWQQV-------LVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALA 289 ++ + LVF TK G + L + L +G+ + AIHG+K Q R RAL Sbjct: 663 MDLLQSQMTNRTPKKYALTLVFVETKRGVDALEQWLCMNGLAATAIHGDKVQMERERALK 722 Query: 290 DFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLV 349 FKSG ++VATD+AARGLDI + HV+N++LP +DYVHRIGRTGRA +G A + Sbjct: 723 SFKSGATPIMVATDVAARGLDIPHVAHVINFDLPKAIDDYVHRIGRTGRAGKSGLATAFF 782 Query: 350 CVDEHKLLRDIEKLLKKEIPRIA 372 L + + +L+++ + Sbjct: 783 NDGNLSLAKSLVELMQESNQEVP 805 >UniRef50_C7HXF4 DEAD/DEAH box helicase domain protein n=3 Tax=Bacteria RepID=C7HXF4_THIIN Length = 666 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 162/398 (40%), Positives = 231/398 (58%), Gaps = 11/398 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LGL +L+A+ + GY P+PIQ IP +L GRD++ AQTGTGKTA F LP+L Sbjct: 9 FAELGLPEPLLQALRDVGYETPSPIQAATIPPLLAGRDVLGQAQTGTGKTAAFALPILAK 68 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMK 121 + H +AL+L PTRELA Q+ E Y+ +L L ++GG S PQ+ Sbjct: 69 IDCNARH------TQALVLAPTRELAIQVAEAFARYATHLPGFNVLPIYGGQSYVPQLAS 122 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G V+V TPGR++D + +KLDQ+ +VLDEAD ML MGFI D+ +L K P +R Sbjct: 123 LKRGAHVVVGTPGRIIDHLERGTLKLDQLAHMVLDEADEMLRMGFIDDVESILKKTPPQR 182 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT I+ +A+ L +P EI + T + + Q V K + L+ ++ Sbjct: 183 QVALFSATMPSAIRRIAQTYLRDPQEITIKAATTTATHIQQRYWMVSGLHKLDALTRILE 242 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 ++ +++F RTK LAE+L G +AA++G+ Q R R + K G + +LVA Sbjct: 243 VEPFEGMIIFARTKQATEELAEKLAARGFTAAALNGDVPQALRERMVQRLKDGQLDILVA 302 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + HVVNY++P E YVHRIGRTGRA +G+A+ V E LLR IE Sbjct: 303 TDVAARGLDVERISHVVNYDIPTDTESYVHRIGRTGRAGRSGDAILFVTPRERHLLRAIE 362 Query: 362 KLLKKEIPRIAIPGYEPDPSIK----AEPIQNGRQQRG 395 + ++ I ++ +P E + E I R+Q G Sbjct: 363 RATRQPITQMQLPSTEAVNDSRISRFMERITEAREQEG 400 >UniRef50_Q4TVV3 Probable ATP-dependent RNA helicase DDX46 n=18 Tax=Eumetazoa RepID=DDX46_DANRE Length = 1018 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 150/422 (35%), Positives = 241/422 (57%), Gaps = 5/422 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 ++ G+S +L A+ + Y +PTPIQ QAIPA++ GRDL+ A+TG+GKT F LP+ + Sbjct: 341 TWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFR 400 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ ++P + P+ A+I+TPTRELA QI + + +SK L +R + V+GG I+ Q+ + Sbjct: 401 HILDQRPVGEAEGPL-AVIMTPTRELALQITKECKKFSKSLALRVVCVYGGTGISEQIAE 459 Query: 122 LRGGVDVLVATPGRLLDLE---HQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ G +++V TPGR++D+ + L +V +V+DEADRM DMGF + R++ + Sbjct: 460 LKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEADRMFDMGFEPQVMRIVDNVR 519 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ ++FSATF ++ALA ++L P+E++V R+ V QHV +++++K L Sbjct: 520 PDRQTVMFSATFPRTMEALARRILSKPVEVQVGGRSVVCSDVEQHVIVIEEEKKFLKLLE 579 Query: 239 MIGKGNWQ-QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++G + V++F + A+ L + L K ++HG Q R + DFK+G R Sbjct: 580 ILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACR 639 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVAT +AARGLD+++L VVNY PN EDYVHR GRTGRA G A + + + + Sbjct: 640 LLVATSVAARGLDVKQLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEGQARYS 699 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 DI K L+ + + + K + G+ + G G + + Sbjct: 700 GDILKALELSGSSVPAELEQLWTNFKEQQKAEGKIIKSSSGFSGKGFKFDETEHALANER 759 Query: 418 KS 419 K Sbjct: 760 KK 761 >UniRef50_Q7UG20 ATP-dependent RNA helicase n=2 Tax=Bacteria RepID=Q7UG20_RHOBA Length = 931 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 165/478 (34%), Positives = 248/478 (51%), Gaps = 36/478 (7%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L L ++ +AVA GY +PTPIQ + IP +L+GRD++A +QTGTGKTA F LP+L Sbjct: 306 FRDLDLRAEVQKAVAASGYDKPTPIQAEIIPYMLDGRDVLAQSQTGTGKTAAFALPILSR 365 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMK 121 + R R + L+L PTRELA Q+ + Y L + ++GG PQ+ + Sbjct: 366 VDVRS------RRPQVLVLAPTRELAIQVARSFTKYGADLSGFQVAAIYGGQDYEPQLKQ 419 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GV V+V TPGR++D + + L ++ LVLDEAD ML+MGF+ D++ VL K P R Sbjct: 420 LRRGVQVVVGTPGRVIDHVKRGTLDLGSLDCLVLDEADEMLNMGFLEDVQFVLEKSPEGR 479 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT I+ +A++ L++P I + + + V Q FV + K + L+ ++ Sbjct: 480 QVALFSATLPKPIRKIADEYLNDPARITIKSKTITAASVRQRALFVSPRDKIDALTRILE 539 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 V+VFT+TK +AE+L++ G + A++G+ Q R R + K G + VLVA Sbjct: 540 VEETDGVIVFTKTKDSTLSVAEKLSQQGFSAIALNGDMPQKVRERTIDQLKRGQLDVLVA 599 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+ + HV N++LP+ E YVHRIGRTGRA +G+A+ + + + LR IE Sbjct: 600 TDVAARGLDVPRISHVFNFDLPHDSESYVHRIGRTGRAGRSGQAIIFLTNAQRRQLRFIE 659 Query: 362 KLLKKEIPRIAIPGY--------------------EPDPSIKAEPIQNGRQQRGGGGRGQ 401 K+ I I IP + D ++ + I ++ G Sbjct: 660 NTTKQPIEIIDIPTVADINEARVRRFKQRITDVSADQDLTVYKDMIAQYAEESGKPMEMI 719 Query: 402 GGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRR---------RPRKP 450 + K K E+ R + + + R RPR+P Sbjct: 720 AAALAEMSQNGRPFLLKERPKKQRERSDRDNSRGRDSFDSNDRSGNRGSFGDDRPRRP 777 >UniRef50_D2QY81 DEAD/DEAH box helicase domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QY81_9PLAN Length = 458 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 175/451 (38%), Positives = 253/451 (56%), Gaps = 15/451 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F S+ LS ++ A+ + GY PTPIQ IP LEG D++ A+TGTGKTA F +P+L+ Sbjct: 13 TFASMDLSDQMMAALEKAGYEYPTPIQAGLIPRALEGVDVVGQARTGTGKTASFVIPILE 72 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L +G +ALIL PTRELA Q+ + V S+ L I V+GG I Q+ K Sbjct: 73 LLD----IERGAPTPQALILVPTRELAVQVRDEVVKLSEGLKINCAAVYGGKPIKSQVDK 128 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G V+V TPGR+LD + + +E +VLDEADRMLD+GF DI R+L + P +R Sbjct: 129 LKKGCHVVVGTPGRVLDHIARGTIDFTHIECVVLDEADRMLDIGFRPDIERILKRCPRER 188 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LL SAT I LA++ ++ P + + + + D + Q V+ RK +LL ++ Sbjct: 189 QTLLLSATVPPPIAKLAQRYMYEPEMLNFSPADVSVDTIEQKYFTVEHDRKFDLLMKLLL 248 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +Q +VF RTK G + + ++L K +AAIHG+ SQG R R +A F+ G +R LVA Sbjct: 249 REEPKQAIVFCRTKRGTDKVYQKLTKKLGNTAAIHGDLSQGQRDRVMAGFRDGSVRYLVA 308 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+ RG+D+ + H+VN+++P +DYVHR+GRTGR G A + VC DE L IE Sbjct: 309 TDVIGRGIDVSTVSHIVNFDIPVFCDDYVHRVGRTGRMGREGVAYTFVCPDEGHELTRIE 368 Query: 362 KLLKKEIPRIAIPGYEP------DPSIKAEPIQ--NGRQQRGGGGRGQGGGRGQQQPRRG 413 + + K + R + +EP A P Q +G+ GG G + Sbjct: 369 ERINKLLKRDEMRDFEPVGYGERSARAPAAPTQVISGKYMHGGNASGVA---PTESATPS 425 Query: 414 EGGAKSASAKPAEKPSRRLGDAKPAGEQQRR 444 EG + +A A PA R G K G++ RR Sbjct: 426 EGDSPAAEAAPAATEKRDSGLGKRGGKKYRR 456 >UniRef50_Q5ZT20 ATP-dependent RNA helicase n=4 Tax=Legionella pneumophila RepID=Q5ZT20_LEGPH Length = 589 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 156/374 (41%), Positives = 225/374 (60%), Gaps = 7/374 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F + S + +A+ + + P+PIQ Q IP +L+GRD +A AQTGTGKTA F LP+LQ Sbjct: 7 NFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPILQ 66 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKY-LNIRSLVVFGGVSINPQMM 120 +L + +ALIL PTRELA Q+ E SKY N+ V+ GG Q+ Sbjct: 67 NL------SPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLK 120 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +LR G V+V TPGR+LD + + L+ ++ +LDEAD ML MGFI D+ +L KLP K Sbjct: 121 QLRSGAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEK 180 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 +Q LFSAT I+ +A L++P IE+ + Q F +K + L ++ Sbjct: 181 KQMALFSATMPYRIRQIANTYLNDPASIEIRMETATVKSIEQRFLFASVHQKPDALIRVL 240 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++Q V+VF RTK +AE L + G+R+ AIHG+ +Q R R +A FK G I +LV Sbjct: 241 EVEDYQGVIVFVRTKSSTEEVAELLQQHGLRAMAIHGDITQSLRERIIAQFKQGAIDILV 300 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD+E + HV+NY++P+ E YVHRIGRTGRA +G + V E +L+ I Sbjct: 301 ATDVAARGLDVERVTHVINYDMPHDNETYVHRIGRTGRAGRSGVTILFVTPKESRLISSI 360 Query: 361 EKLLKKEIPRIAIP 374 E+ ++ I ++ +P Sbjct: 361 ERHTRQRIEKVQVP 374 >UniRef50_Q5NZY2 ATP-dependent RNA helicase DeaD n=12 Tax=Bacteria RepID=Q5NZY2_AZOSE Length = 658 Score = 558 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 152/391 (38%), Positives = 222/391 (56%), Gaps = 8/391 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF L L +L A++E GY P+PIQ IP +L G DL+ AQTGTGKTA F LPLL Sbjct: 45 SFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLLD 104 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 L + + L+L PTRELA Q+ E + Y+K L L V+GG S+ Q+ Sbjct: 105 RLDL------AVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLR 158 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L G V+V TPGR++D + ++ LD + LVLDEAD ML MGFI D+ +L PA+ Sbjct: 159 QLARGAHVIVGTPGRVMDHIERKSLNLDSLTTLVLDEADEMLRMGFIDDVEWILQHTPAE 218 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LFSAT D I+ +A + L P E+++ T Q + K + L+ ++ Sbjct: 219 RQTALFSATMPDAIRRVAHRYLREPREVKIKASTTTVSTTRQRYCQISVAHKLDALTRIL 278 Query: 241 G-KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++ ++F RTK LA++L G +AA++G+ +Q R R + K G + ++ Sbjct: 279 EVEEDFDAAIIFVRTKTATVELADKLEARGYSAAALNGDMTQQLRERVIEQLKGGQLDIV 338 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD+ + HV+NY++P E YVHRIGRTGRA TG A+ V E ++L+ Sbjct: 339 VATDVAARGLDVSRISHVINYDIPYDTEAYVHRIGRTGRAGRTGSAILFVAPREMRMLKV 398 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 IE+ ++ I + +P E + + Sbjct: 399 IERATRQPIEALQLPSREAVADKRVAAFRQQ 429 >UniRef50_C6HUU6 Putative ATP-dependent helicase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUU6_9BACT Length = 472 Score = 558 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 184/452 (40%), Positives = 259/452 (57%), Gaps = 11/452 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF++LGL+PD+LRA+++ + PTPIQ+Q IP ++EGRD++ AQTG+GKT GF LP L Sbjct: 1 MSFETLGLNPDLLRALSDLKHESPTPIQKQTIPPIIEGRDVLGVAQTGSGKTGGFLLPSL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + R + L+L+PTRELA QI + R+Y KYL R++++ GG + Q+ Sbjct: 61 HR---NKRAQGNRTRHQILVLSPTRELAGQIERSAREYGKYLRSRTVLLVGGTDMRRQID 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR D+++ATPGRL+D + + L V +VLDEADRMLDMGF+ D+ +L L + Sbjct: 118 FLRRPWDLVIATPGRLIDHMQRGTINLSHVHTVVLDEADRMLDMGFLPDVETILKALHPE 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLSHM 239 RQ LLF+AT I+ L + +P+ I + + + Q V + +K LL + Sbjct: 178 RQTLLFTATLPARIQMLTKTYQKDPVLIRLETASAPPVSIDQEVVAISHGAQKWGLLKTI 237 Query: 240 IGKGNW--QQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + + Q L+FTRTK GA LA QL +G S A+HG+KSQ R R L+ F++G R Sbjct: 238 LTEPQTTEGQTLIFTRTKRGAEDLANQLLAEGFPSDALHGDKSQSQRNRVLSKFRAGQTR 297 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVATD+AARGLDI+ + V+NY+LP PEDYVHRIGRTGRA +G A+S + LL Sbjct: 298 ILVATDVAARGLDIDTVTCVINYDLPQSPEDYVHRIGRTGRAGRSGRAISFCHPADRNLL 357 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 RDIE+LL +P + + R G G G R + GEG Sbjct: 358 RDIERLLGSSVPVSPLSPPPQPKGDRPFRSSGPRSSGGPRPGGFRGERTFRSDAPGEGRP 417 Query: 418 KSASAKPAEKPSRRLGDA-----KPAGEQQRR 444 ++P+ G + KPAG R Sbjct: 418 GFRQGGRTDRPAGGSGRSEWRRDKPAGHGPRH 449 >UniRef50_Q4FSS4 Possible ATP-dependent DEAD/DEAH box RNA-helicase n=5 Tax=Proteobacteria RepID=Q4FSS4_PSYA2 Length = 567 Score = 558 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 179/476 (37%), Positives = 257/476 (53%), Gaps = 28/476 (5%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F L ++ IL A+ GY PTPIQ +AIP L+GRDL+ SAQTG+GKTA F +P+L Sbjct: 44 VTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFVIPVL 103 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 L + +ALILTPTRELA Q+ ++VR YSK + + + + GG N Q+ Sbjct: 104 DRL---SRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQI 160 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ GV V+VATPGRLLD + V L +EILVLDEADRMLDMGF DI +L P Sbjct: 161 TALKKGVQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADDISDILRAAPI 220 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLSH 238 RQ ++ SAT+ + +A NP + + S + + V++ D K LL Sbjct: 221 DRQTIMCSATWDGPVGKIAASFTKNPERVSI---KVESAHIEEKVYYCDDFDHKNRLLDK 277 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + +Q+++F TK LA+QL + G +++ +HG+ Q R R + D ++G ++ Sbjct: 278 IVCHKDMEQIIIFAATKRSTEKLAKQLQEAGHKASFLHGDLPQSKRNRIVQDLRNGKCKI 337 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLD+ L HV+NY+LP EDYVHRIGR GRA TG A+SL +D+ L Sbjct: 338 LVATDVAARGLDVPALSHVINYDLPRQTEDYVHRIGRCGRAGRTGVAISLCSMDDRPQLN 397 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSI-------------------KAEPIQNGRQQRGGGGR 399 I + L +++ I G EP + GR + GG Sbjct: 398 AINRYLDRKMEASVIEGMEPKKTYVPSENKGNGRGRGRGRSNGGGNGNGQGRGRSAGGYA 457 Query: 400 GQGGGRGQQQPR-RGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 G G + Q R R G + +A+ + A S G + + + R KP + Sbjct: 458 GSGASKPSGQGRGRPSGDSSNATGQRASNDSGYQGKPRDSSGKPNERSGGKPYQGK 513 >UniRef50_Q30SZ2 DEAD/DEAH box helicase-like protein n=2 Tax=Campylobacterales RepID=Q30SZ2_SULDN Length = 432 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 197/437 (45%), Positives = 292/437 (66%), Gaps = 6/437 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF+ LG+ +L A+ + GY +PT IQ +AIP +L D+ A+AQTGTGKTA F L +L Sbjct: 1 MSFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGML 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L R+ +R +R L++ PTREL+ QI E+++ Y+K + I V+ GG + Q Sbjct: 61 QRL--RKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQK 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GVD+++ATPGR+L+ + + L VEI VLDEADRMLDMGF+ +IRR+ LP + Sbjct: 119 ILKEGVDIVIATPGRVLEHVDKG-LSLSHVEIFVLDEADRMLDMGFMKEIRRIHPILPKR 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSATFSD ++ L++ +L P IE +++N+ D + Q + VD ++K LL+++I Sbjct: 178 HQTLLFSATFSDKVRKLSKLILTKPAFIETSKKNSTVDTINQVAYLVDTEKKAPLLAYII 237 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 G N++QVLVFTRTK A+ L +L KDG++ IHG+K+Q R + L +FK G I+VLV Sbjct: 238 GSRNFRQVLVFTRTKASADLLVVELKKDGLKCGIIHGDKTQANRLKTLNEFKEGKIKVLV 297 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIA+RGLDIEELP V+NYELP++PEDYVHR+GRTGRA G A+SL+ + E ++DI Sbjct: 298 ATDIASRGLDIEELPFVINYELPSIPEDYVHRVGRTGRAGRDGMAISLIDIYEKFDIKDI 357 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 EKL+ +IP+ I G+EPDP+I+ + + + + + +++PR+ E G+K + Sbjct: 358 EKLIGMKIPQEIIAGFEPDPTIRRL---DQDELKLKSEHKKVEVKHERKPRKKEDGSKKS 414 Query: 421 SAKPAEKPSRRLGDAKP 437 + +++ +K Sbjct: 415 ANYKKPVTTKKRKTSKR 431 >UniRef50_Q0D1K3 Pre-mRNA-processing ATP-dependent RNA helicase prp5 n=34 Tax=Dikarya RepID=PRP5_ASPTN Length = 1181 Score = 557 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 157/430 (36%), Positives = 244/430 (56%), Gaps = 11/430 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 + GL L + GY PT IQ QAIPA++ GRD++ A+TG+GKT F +P+ +H Sbjct: 551 WSQCGLGVQTLDVIDRLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTVAFLIPMFRH 610 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + ++P P+ LI+TPTRELA QI ++ + + K LN+R++ +GG I Q+ +L Sbjct: 611 IKDQRPLENMEGPI-GLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAEL 669 Query: 123 RGGVDVLVATPGRLLDLEHQNA---VKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 + G +++V TPGR++DL NA L +V +VLDEADRM DMGF + +++ + Sbjct: 670 KRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANVRP 729 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ +LFSATF +++ALA K L+ P+EI V ++ + ++TQ V ++ +K L + Sbjct: 730 DRQTVLFSATFPRNMEALARKTLNKPVEIVVGGKSVVAPEITQIVEVRNEDKKFVRLLEL 789 Query: 240 I------GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKS 293 + + + L+F + A+ L +L + G +IHG K Q R + DFK+ Sbjct: 790 LGNLYSSDENEDARALIFVERQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKA 849 Query: 294 GDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDE 353 G VL+AT +AARGLD+++L VVNY+ PN EDYVHR GRTGRA TG A++ + D+ Sbjct: 850 GIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQ 909 Query: 354 HKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRG 413 + DI K LK+ ++ P + E ++ G+++ G G G Q R Sbjct: 910 ERFSVDIAKALKQSGQKVPEP-VQQMVDSFLEKVKAGKEKASASGFGGKGLERLDQERDA 968 Query: 414 EGGAKSASAK 423 + + K Sbjct: 969 ARMRERRTYK 978 >UniRef50_C4V8Q7 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4V8Q7_NOSCE Length = 528 Score = 557 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 144/404 (35%), Positives = 224/404 (55%), Gaps = 9/404 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F+ ++L + + PTPIQ Q P L G+D++ AQTG+GKT F LP L Sbjct: 127 VKFEHAPFENEVLNNFKLKAFTSPTPIQAQGWPMALTGKDMVGIAQTGSGKTLSFVLPAL 186 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H + P G P+ L+L PTREL QI + +Y ++ N+R V+GGVS Q Sbjct: 187 IHARAQIPLRSGDGPI-VLVLAPTRELCLQIKDVFDEYCRFFNMRCTAVYGGVSSYTQKR 245 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 + G +V+V PGRL+DL Q A+ ++V LVLDEADRMLDMGF +++++ Sbjct: 246 DISMGCEVVVGCPGRLIDLNEQGALHFNRVTFLVLDEADRMLDMGFEPQLKKIIVNTNPD 305 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 RQ L++SAT+ +++ LAE + N +++ + + ++ Q V +D K L Sbjct: 306 RQTLMWSATWPKEVRRLAENYMKNFVQLTIGSVELKTNIKIKQIVSVIDSHEKANKLHES 365 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + ++V++F TK ++L + L++ G ++ AIHG+KSQ R R ++DF+SG +L Sbjct: 366 LNEKKNEKVIIFANTKRMCDNLEDDLSRRGYKAVAIHGDKSQNIRDRIISDFRSGYKNIL 425 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAA-ATGEALSLVCVDEHKLLR 358 +ATD+AARGLDI+ + V+NY+ PN EDYVHRIGRT R G + S + + Sbjct: 426 IATDVAARGLDIKNVALVINYDFPNNIEDYVHRIGRTARGDVTEGLSHSFFTSENSACAK 485 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQG 402 ++ K+LK+ + P I +NG GG + Sbjct: 486 ELVKILKEANQDV------PSKLIDMSTTKNGGYNSRGGNYSRP 523 >UniRef50_Q17W71 ATP-dependent RNA helicase n=19 Tax=Helicobacter RepID=Q17W71_HELAH Length = 494 Score = 557 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 161/383 (42%), Positives = 237/383 (61%), Gaps = 7/383 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF+ LGL +L++V E G+ P+PIQ++AIPAVL+GRD++A AQTGTGKTA F LP++ Sbjct: 23 SFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPIIN 82 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 +L K + AL++TPTRELA QI + + K+ +++ V+GG S+ Q Sbjct: 83 NL-------KNNHTIEALVITPTRELAMQISDEIFKLGKHTKTKTVCVYGGQSVKKQCEF 135 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 ++ V++ATPGRLLD + + +++VLDE+D MLDMGF+ DI + LP++ Sbjct: 136 IKKNPQVMIATPGRLLDHLKNDRIHKFVPKVVVLDESDEMLDMGFLDDIEEIFDYLPSEA 195 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT + IK LA+K+L NP++I +A N + +TQ + +++ + E + H++ Sbjct: 196 QILLFSATMPEPIKKLADKILENPIKIHIAPSNITNTDITQRFYVINEHERSEAIMHLLD 255 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 ++ +VFTRTK A+ L + L +S A+HG+ Q R ++ FK D VLVA Sbjct: 256 TQAPEKSIVFTRTKKEADELHQFLISKNYKSTALHGDMDQRDRRASIMAFKKNDADVLVA 315 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+A+RGLDI + HV NY LP E Y+HRIGRTGRA G A++LV E+K L ++ Sbjct: 316 TDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITLVTPLEYKELLRMQ 375 Query: 362 KLLKKEIPRIAIPGYEPDPSIKA 384 K + EI IP + IK Sbjct: 376 KEIDSEIELFEIPTINENQIIKT 398 >UniRef50_Q86XP3 ATP-dependent RNA helicase DDX42 n=64 Tax=Eukaryota RepID=DDX42_HUMAN Length = 938 Score = 557 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 152/436 (34%), Positives = 230/436 (52%), Gaps = 9/436 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF G ++ + + Y +PTPIQ Q +P L GRD++ A+TG+GKTA F P+L Sbjct: 254 SFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLI 313 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ ++ G P+ A+I+ PTREL QI + + K N+RS+ V+GG S+ Q Sbjct: 314 HIMDQKELEPGDGPI-AVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKA 372 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G +++V TPGRL+D + A L +V LV DEADRM DMGF + +R + + + R Sbjct: 373 LQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDR 432 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVD--KKRKRELLSHM 239 Q LLFSATF I+ LA +L +P+ + A++ VTQ V + + L + Sbjct: 433 QTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRL 492 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + VL+F K A LA L ++G +HG+ Q R + ++DFK DI VL Sbjct: 493 VEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVL 552 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLDI + V+NY++ + + HRIGRTGRA G A +L+ + D Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612 Query: 360 IEKLL---KKEIPRIAIPGYEPDPSIKAEPIQNGRQQR---GGGGRGQGGGRGQQQPRRG 413 + + L + + + + + + + G+ ++ GGGG G G Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRERPGLGSENMD 672 Query: 414 EGGAKSASAKPAEKPS 429 G S A KPS Sbjct: 673 RGNNNVMSNYEAYKPS 688 >UniRef50_Q1MY97 DEAD/DEAH box helicase-like protein n=1 Tax=Bermanella marisrubri RepID=Q1MY97_9GAMM Length = 614 Score = 557 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 175/463 (37%), Positives = 251/463 (54%), Gaps = 20/463 (4%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F SLGL ++LRA+ EQGY +P+PIQ+Q+IP +LEG+D++ AQTGTGKTA FTLPLL Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKY-LNIRSLVVFGGVSINPQMMK 121 R + L+L PTRELA Q+ V YSK+ N++ ++GG Q Sbjct: 68 ------TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRA 121 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G +V TPGR++D + +KL+ + +VLDEAD ML MGFI D+ VL ++P KR Sbjct: 122 LKQGPQWVVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVPEKR 181 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT IKA+AEK L P EI + + ++ + Q V K + L + Sbjct: 182 QIALFSATMPKQIKAVAEKHLREPTEIRIKSKTATNESIEQKYWLVKGVDKNQALLRICE 241 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + ++VF RTK +A+ + G+R A++G+ +Q R RA+ K G + +LVA Sbjct: 242 TSEFDAMMVFVRTKQATEEVADYMRSHGLRCEALNGDVAQAQRERAVDRLKKGQVDMLVA 301 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + HVVNY++P E YVHRIGRTGRA +GEA+ V E ++L IE Sbjct: 302 TDVAARGLDVERISHVVNYDIPYDAESYVHRIGRTGRAGRSGEAILFVRPRERRMLSTIE 361 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQ-------NGRQQRGGGGRGQGGGRGQQQPRRGE 414 ++ +K+I +I +P + + + + + GR Q E Sbjct: 362 RVTRKKIQQIELPTAKEVNAKRRDQFKVRALEHIEGRDIEIFKKIASEILAEQPALDPIE 421 Query: 415 GGAKSASAKPAEKP------SRRLGDAKPAGEQQRRRRPRKPA 451 A A KP R GE+ R+ R + Sbjct: 422 LAAAFAQMSQGNKPLFMDESEPRFKPETDRGERGERKERRNNS 464 >UniRef50_C7LND0 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LND0_DESBD Length = 545 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 209/449 (46%), Positives = 279/449 (62%), Gaps = 7/449 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSFD LGL ++L+A+ +GY PT IQ QAIP +L GRD++A AQTGTGKT F LP++ Sbjct: 1 MSFDQLGLRVELLKAIKNKGYEAPTAIQAQAIPVILAGRDILARAQTGTGKTDAFGLPIV 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L + + RALILTPTRELA Q+GE+++ Y++ +++R V FGGV I PQ+ Sbjct: 61 QILGLTRGNG---HHPRALILTPTRELALQVGESIKAYARKVSLRCTVAFGGVRIEPQIA 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L G+D+LVATPGRLLDL Q + L +E LV DEADRMLD+GF +I +L LP Sbjct: 118 RLERGIDILVATPGRLLDLASQEHLSLASIEFLVFDEADRMLDLGFSGEINAILDLLPTV 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 R+ +LFSAT++ IKALA K+L P IE+ A++ V Q VH V+K K LL H+I Sbjct: 178 RRTMLFSATYTPQIKALAAKMLDKPEYIEITPDTAAAEAVQQKVHHVNKDNKLPLLLHLI 237 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 K ++LVF RT+ AN L ++L GI AA+HG+KSQ R R L +FK G I +LV Sbjct: 238 EKQKQDRILVFARTRTWANRLTDKLAAHGISVAALHGSKSQSLRKRTLEEFKDGKIHILV 297 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI LP VVNY++PN PEDYVHRIGRTGRA +G A+SLV +E LL I Sbjct: 298 ATDVAARGLDISNLPLVVNYDIPNSPEDYVHRIGRTGRAGVSGIAVSLVSPEERNLLLAI 357 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 E LL+ +IP A+ G+ D + + G + R ++ + AK Sbjct: 358 EDLLRHQIPVEAVKGFTEDSDV----PDFVLYRPGNPKSERNAPRAIKELVAKKSPAKLT 413 Query: 421 SAKPAEKPSRRLGDAKPAGEQQRRRRPRK 449 +KP ++ G + + RK Sbjct: 414 VQGRGKKPKDAGPESTTRGNKNEKSDARK 442 >UniRef50_A3WBD4 DNA and RNA helicase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WBD4_9SPHN Length = 497 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 180/456 (39%), Positives = 253/456 (55%), Gaps = 14/456 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F LGLSP++L+AV + GY EPT IQ +AIPAVL +DL+ AQTGTGKTA F LP++ Sbjct: 36 MTFADLGLSPELLKAVEDAGYTEPTAIQAEAIPAVLMMKDLIGIAQTGTGKTASFVLPMI 95 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + A R+LIL PTRELAAQ+ EN Y +++ ++ GGV + Q+ Sbjct: 96 DVMAAGRRRA---LMPRSLILEPTRELAAQVAENFEKYGANHDLKMALLIGGVQMGDQLK 152 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GVDVL+ATPGRL+DL + + L+ E+LV+DEADRMLDMGFI DI + KLP Sbjct: 153 TLDEGVDVLIATPGRLMDLFERGKILLNGCELLVIDEADRMLDMGFIPDIEFICDKLPET 212 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT I+ LA+K L NP IE R T + +T V ++KR+ L ++ Sbjct: 213 RQTMLFSATMPAPIEKLAKKFLSNPKRIETTRAATTNKDITAFKVPVKARQKRDTLEWLL 272 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + ++F K L + L + G S IHG+ Q +R + L FKSGD+ +LV Sbjct: 273 ANDQVETAIIFANRKTTVRELNKHLQRQGFASGEIHGDMDQSSRLKELDRFKSGDVNILV 332 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 A+D+AARGLDI+ + HV N++ P P+DYVHRIGRTGRA A G A +LV ++ + + ++ Sbjct: 333 ASDVAARGLDIKGVSHVFNFDTPWHPDDYVHRIGRTGRAGAKGRAFTLVADEDAEAIANV 392 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGG-----------GRGQQQ 409 EKL +I + + + + + G ++ Sbjct: 393 EKLTGAKIKVFGKEDVRVELADGSAKNTGSDDEAKDEKPAEKKSRSRSRKRDDEGDAPRK 452 Query: 410 PRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRR 445 PRR K A + D PAGE + Sbjct: 453 PRRESAEDKPARKSRPRRRDDESDDPVPAGEWNGPK 488 >UniRef50_A2EVI2 DEAD/DEAH box helicase family protein n=1 Tax=Trichomonas vaginalis RepID=A2EVI2_TRIVA Length = 598 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 136/373 (36%), Positives = 220/373 (58%), Gaps = 5/373 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+ L L I + + + + +PTPIQ +IP L+G DL+ A+TG+GKTA F +P + Sbjct: 125 LTFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKGHDLIGIAKTGSGKTAAFLIPAM 184 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ ++P +G P+ L+L+PTRELA QI E + + L IR +FGG PQ Sbjct: 185 VHIGLQEPMYRGDGPI-VLVLSPTRELAQQIAEVAKGFCDNLMIRQTCLFGGAGRGPQAN 243 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR ++VATPGRL+D +++V LVLDEAD+MLDMGF IR+++ + Sbjct: 244 DLRHLPSLVVATPGRLIDFIEGGQCPMNRVNFLVLDEADQMLDMGFEPQIRKIIGHISKD 303 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 RQ ++FSAT+ +I+ LA L +P+ + + ++ T + + Q + ++ K + Sbjct: 304 RQTMMFSATWPKEIQQLAADFLVDPVHMIIGNKDLTTNSNIKQVITKCEEFEKLSKCLEV 363 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + ++++FT+TK + L E LN G ++ ++HG+K+Q R L F+S +L Sbjct: 364 LNEHKDDKIIIFTKTKRTTDDLQENLNMKGFQAYSLHGDKAQNQRDFVLGKFRSCKKGIL 423 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD+ ++ V+NY+ P E YVHRIGRT R G A++ + + R Sbjct: 424 VATDVAARGLDVNDIDIVINYDFPGDIETYVHRIGRTARGNKEGLAVTFFTDENKNMSRK 483 Query: 360 IEKLL---KKEIP 369 + K++ K+E+P Sbjct: 484 LAKIMTQAKQELP 496 >UniRef50_B7EQA6 cDNA clone:J023079L21, full insert sequence n=5 Tax=Magnoliophyta RepID=B7EQA6_ORYSJ Length = 759 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 152/413 (36%), Positives = 228/413 (55%), Gaps = 8/413 (1%) Query: 16 VAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRP 75 V + G+ PTPIQ Q+ P L RD++A A+TG+GKT G+ +P ++ ++ R Sbjct: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGF--ILLKRLQHNSRDG 303 Query: 76 VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGR 135 L+L+PTRELA QI + + + + I S+ ++GG PQ+ L G D++VATPGR Sbjct: 304 PTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGR 363 Query: 136 LLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIK 195 L D+ V L QV LVLDEADRMLDMGF IR+++ ++ KRQ L+F+AT+ +++ Sbjct: 364 LNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVR 423 Query: 196 ALAEKLLHNPLEIEVARRN--TASDQVTQHVHFVDKKRKRELLSHMIGKGNWQ-QVLVFT 252 +A LL NP+++ + + A+ +TQ+V + K L ++ ++++F Sbjct: 424 KIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFC 483 Query: 253 RTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIE 312 TK + LA L + ++AIHG+KSQ R L++F+SG +LVATD+AARGLDI+ Sbjct: 484 STKRMCDQLARNLARQ-YGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIK 542 Query: 313 ELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIA 372 ++ VVNY+ P EDYVHRIGRTGRA ATG A + C + K D+ K+L+ ++ Sbjct: 543 DIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLVKILEGANQSVS 602 Query: 373 IPGYEPDPSIKAEPIQN--GRQQRGGGGRGQGGGRGQQQPRRGEGGAKSASAK 423 + GGRG G + G S S Sbjct: 603 QQLRDMVSRGGYGGRSRRWASSDDSYGGRGYDSGYTSRSTDNYNSGYGSQSGN 655 >UniRef50_Q1AG34 Ded1-like DEAD-box RNA helicase n=3 Tax=Coelomata RepID=Q1AG34_CHITE Length = 776 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 162/437 (37%), Positives = 242/437 (55%), Gaps = 24/437 (5%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SFD + L+ I + Y +PTP+Q+ AIP +L GRDLM+ AQTG+GKTA F +P+L Sbjct: 268 SFDDIKLTEIIRTNIKMARYDKPTPVQKYAIPIILSGRDLMSCAQTGSGKTAAFLVPILN 327 Query: 62 HLITR---------QPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGG 112 ++ + +P+ + ++ L+L PTRELA QI E + +S +R V++GG Sbjct: 328 RMLEQGASMNPASNRPYQRRKQYPLGLVLAPTRELATQIYEEAKKFSYRSRMRPAVLYGG 387 Query: 113 VSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRR 172 + + QM +L G ++VATPGRL D+ ++ + L+ + LVLDEADRMLDMGF IR Sbjct: 388 NNTSEQMRELDRGCHLIVATPGRLDDIINRGKIGLENLRFLVLDEADRMLDMGFEPQIRH 447 Query: 173 VLTK--LPA--KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVD 228 ++ +P +RQ L+FSATF +I+ LA L N + + V R + S+ +TQ + +V+ Sbjct: 448 IIENRDMPPTGQRQTLMFSATFPKNIQELASDFLSNYIFLAVGRVGSTSENITQTILWVN 507 Query: 229 KKRKRELLSHMIGK--------GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKS 280 + KR L ++ + L+F TK GA+ L E L ++ +IHG++S Sbjct: 508 ENEKRSYLLDLLSRLREGSPDYSPDSLTLIFVETKKGADALEEFLYQNKHPVTSIHGDRS 567 Query: 281 QGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAA 340 Q R AL F+SGD +LVAT +AARGLDI + HV+NY+LP+ E+YVHRIGRTGR Sbjct: 568 QREREDALKCFRSGDCPILVATAVAARGLDIPHVKHVINYDLPSDVEEYVHRIGRTGRMG 627 Query: 341 ATGEALSLVCVDEHKLLRDIEKLL---KKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGG 397 G A S ++ D+ +LL +E+P + G Sbjct: 628 NLGIATSFFNEKNRNIVSDLVELLIETNQELPSFLEEMANDRYGGPRRSNNSRGGGNRYG 687 Query: 398 GRGQGGGRGQQQPRRGE 414 G G R +QP+ + Sbjct: 688 GGTAFGSRDYRQPQSNQ 704 >UniRef50_C3RH47 ATP-dependent RNA helicase RhlE n=2 Tax=Bacteria RepID=C3RH47_9MOLU Length = 418 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 185/419 (44%), Positives = 265/419 (63%), Gaps = 1/419 (0%) Query: 19 QGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRA 78 Y P+PIQ+QAIPA++ GRD+ A+TGTGKTA F LP+LQ L R K R ++A Sbjct: 1 MKYDIPSPIQEQAIPAIISGRDIFGCAKTGTGKTAAFALPILQKLYLRDESEKYPRTIKA 60 Query: 79 LILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLD 138 LIL PTRELA QI E + +N++S V+FGGV Q+ K+ G+DVL+ATPGRL+D Sbjct: 61 LILAPTRELAIQINETFEAMNPQVNLKSAVIFGGVRQGSQVTKINRGIDVLIATPGRLID 120 Query: 139 LEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALA 198 L +Q V L VE LVLDEADRMLDMGFI DIR++L +P + Q +LFSAT D+IK L Sbjct: 121 LYNQGLVDLKHVEYLVLDEADRMLDMGFIKDIRKILRFIPRRHQTMLFSATLPDEIKHLV 180 Query: 199 EKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGA 258 LL++PL+I ++ N +++ Q ++FVDK K +LL ++ +VF RTK Sbjct: 181 SDLLNDPLKIMISSGNVTVEKINQSLYFVDKVNKAKLLIKLLENPQIYNAIVFVRTKRNV 240 Query: 259 NHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVV 318 + L ++L K I IHG+KSQ AR RAL +FK+ +RVLVA+DIAARG+DI+EL HV+ Sbjct: 241 DTLCKKLIKAQITCEGIHGDKSQNARVRALNNFKNDKVRVLVASDIAARGIDIDELTHVI 300 Query: 319 NYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEP 378 N++LP+ E+YVHRIGRT RA A+GEA++ E LL+DI+K + ++IP + P Y P Sbjct: 301 NFDLPDQAENYVHRIGRTARAGASGEAITFCSFQEKALLKDIQKFINQDIPVVDNPYY-P 359 Query: 379 DPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKP 437 + ++ +++G + + + +Q ++ + K ++ +P Sbjct: 360 MKDLSIPEKKHKSKKKGETQKSRDKAKHLKQGQKKLSVRTNNIKKNSKTKRSNFKRRRP 418 >UniRef50_C0W1P0 Superfamily II helicase n=2 Tax=Actinomyces RepID=C0W1P0_9ACTO Length = 616 Score = 556 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 161/401 (40%), Positives = 236/401 (58%), Gaps = 9/401 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L L ++L A+ E G+ PTPIQ+QAIP +LEGRD++ AQTGTGKTA F LP+L Sbjct: 6 TFADLNLPENVLSAITEMGFETPTPIQEQAIPHLLEGRDIVGIAQTGTGKTAAFGLPMLA 65 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 H+ G V+A++L PTRELA Q + ++ ++ ++ + V+GG S PQ+ Sbjct: 66 HID------PGFNAVQAIVLAPTRELAMQSATAIESFAAHMPKVKVVTVYGGASYTPQIK 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA- 179 L+ G V+V TPGR++DL + A+KL+ V +LVLDEAD ML MGF D+ + +P Sbjct: 120 GLKSGAQVVVGTPGRVIDLIEKGALKLNNVSVLVLDEADEMLRMGFAEDVETIAASMPES 179 Query: 180 -KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 KR LFSAT D I+ +A++ L +P+ IEVAR+++ + + Q V K K L Sbjct: 180 GKRITALFSATMPDFIQRVADQHLTDPVRIEVARQSSTVENIHQTYAVVPFKHKLGALGR 239 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + +VF RT+ A+ +A + G +AAI G+ SQ R R ++ + G + V Sbjct: 240 VLATRDEDAAIVFVRTRVDADEVAVDMATRGFTAAAISGDVSQNERERIVSRLRDGSLDV 299 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLD+E + V+N+++P E YVHR+GRTGRA G +L+ E LR Sbjct: 300 LVATDVAARGLDVERIGLVINFDVPRETEAYVHRVGRTGRAGRAGRSLTFFTPKEQFRLR 359 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGR 399 IEKL ++ I IP +A + + R GR Sbjct: 360 QIEKLTGTKMEEIVIPSPREVSEFRARRLVSLMPDRIELGR 400 >UniRef50_Q65XX1 Vasa-and belle-like helicase protein 1, isoform c n=3 Tax=Caenorhabditis elegans RepID=Q65XX1_CAEEL Length = 660 Score = 556 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 162/386 (41%), Positives = 232/386 (60%), Gaps = 18/386 (4%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F+ G P ++ V GY +PTP+Q+ +IP +L RDLM+ AQTG+GKTA F LP++QH Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 200 Query: 63 LITRQPH-------AKGRRP--VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGG- 112 ++ P GRR AL+L+PTRELA QI + +S NI++ +++GG Sbjct: 201 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 260 Query: 113 VSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRR 172 + Q+ +LR G +L+ATPGRL+D+ Q + L LVLDEADRMLDMGF IR+ Sbjct: 261 ENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRK 320 Query: 173 VLTK-LPAK--RQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVD 228 ++ + +P K R +FSATF +I+ LA+ L N + + V R + S+ + Q + +V+ Sbjct: 321 IVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVN 380 Query: 229 KKRKRELLSHMI-GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRA 287 + KR L ++ + + VLVF TK GAN LA LN+ IRS +IHG+ Q R R Sbjct: 381 EMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERN 440 Query: 288 LADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALS 347 L F+SG +LVAT +AARGLDI + HV+NY+LP ++YVHRIGRTGR G A S Sbjct: 441 LELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATS 500 Query: 348 LVCVDEHKLLRDIEKLL---KKEIPR 370 + RD++ L+ +E+P Sbjct: 501 FFNDKNRGIGRDLKNLIVESNQEVPE 526 >UniRef50_Q15T34 DEAD/DEAH box helicase-like n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15T34_PSEA6 Length = 458 Score = 556 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 218/461 (47%), Positives = 289/461 (62%), Gaps = 18/461 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF++LGL +++ A+A QGY T IQ++AIP VL DL+A AQTGTGKTA FTLPLL Sbjct: 1 MSFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L +Q + + VR+LI+TPTRELAAQ+ +V YS LNIRS V+GGV I PQ+ Sbjct: 61 QRLAAKQ--STKVQGVRSLIVTPTRELAAQVAISVEIYSTQLNIRSFAVYGGVRIEPQIA 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L+ GVDVL+ATPGRLLDL Q A+ + +EILV DEADRMLD+GFI D++R+ + LP K Sbjct: 119 QLQEGVDVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFIDDVKRIQSLLPVK 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSATFS IK A ++L+ P IEV+ N+ D V Q H +++ RK L +I Sbjct: 179 RQTLLFSATFSKQIKHFAREMLNAPKTIEVSAVNSTVDLVAQTFHPIEQARKSAALIQLI 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + W Q LVF RTK A+ L +L GI +A+IH N++Q ART+AL FK+G+I+VLV Sbjct: 239 QQHRWSQTLVFIRTKRTADALVTELEDAGIAAASIHANRTQHARTQALNAFKAGEIQVLV 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ +LP VVNY+LP VPEDYVHRIGRTGRA TG A+SL DE L+ + Sbjct: 299 ATDIAARGIDVSQLPCVVNYDLPYVPEDYVHRIGRTGRAGNTGTAISLFSPDEISQLQSL 358 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 E+ L + + + G+ P + N R + R + + +G +A Sbjct: 359 ERYLDQHLKPSTLVGFAPKDQVTKSWSANKANTRVNSA-EKPTSRNMENTKHVKGKPPAA 417 Query: 421 S---------------AKPAEKPSRRLGDAKPAGEQQRRRR 446 A P SR+ G ++ RR+ Sbjct: 418 KLNIDDEDDELYGNFEADPHTSSSRKQHKGSAGGAKRSRRK 458 >UniRef50_UPI00016C5336 ATP-dependent RNA helicase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5336 Length = 523 Score = 556 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 155/443 (34%), Positives = 233/443 (52%), Gaps = 16/443 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L L ++ A+ GY+ PTPIQ+ IP L G+D++ AQTGTGKTA F +P L Sbjct: 86 MLFADLKLMRPLMDAITAAGYKNPTPIQENVIPPALRGKDVIGQAQTGTGKTAAFLIPFL 145 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + +++TPTRELA QI + R + V+GG + Q+ Sbjct: 146 NRW-----RPHTLKGPIGVVMTPTRELALQIANEAEKLAPSKRFRCVPVYGGTGMQRQLD 200 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L G D++V TPGR+LD + ++ L QV VLDEADRMLD+GF DI R+L + P++ Sbjct: 201 GLTRGCDLVVGTPGRMLDHLQRGSMSLSQVRYAVLDEADRMLDIGFRDDIERILKRCPSE 260 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LL SAT D IK L + + +P+ + + D++ Q VD+ RK ELL ++ Sbjct: 261 RQTLLMSATVPDSIKRLVNRYMRDPVHLHMMPEKPTVDKIRQSYFTVDQDRKFELLKRVV 320 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +Q L+F K A++L L + ++A IHG+ Q R + +A F++ DI+ L+ Sbjct: 321 EREKPRQCLIFVERKRWADNLYRDLKRAVPKAAVIHGDLPQSQREKIMAAFRTADIKYLI 380 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+ +RG+D+ L HV+NY+LP E+YVHRIGRTGR G A+S V ++ + L +I Sbjct: 381 ATDVMSRGIDVSGLSHVINYDLPMDIENYVHRIGRTGRIGKDGIAISFVLPEQGEHLTNI 440 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAE-----------PIQNGRQQRGGGGRGQGGGRGQQQ 409 E ++ + I + G+E + ++ G G Q Sbjct: 441 EMMINRLIEEDRVEGFEAAAPRASRPAAEVKVVFSGWEAAKEEKPATDDDGWGSDDAPPQ 500 Query: 410 PRRGEGGAKSASAKPAEKPSRRL 432 G K + +K S+RL Sbjct: 501 SGGGNDPKKPPFGRRGKKYSQRL 523 >UniRef50_Q0B215 DEAD/DEAH box helicase domain protein n=8 Tax=Proteobacteria RepID=Q0B215_BURCM Length = 511 Score = 556 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 208/382 (54%), Positives = 270/382 (70%), Gaps = 1/382 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF SLGL +LR + + Y+ PTP+Q +AIPAVL G+D+MA AQTGTGKTAGF LPLL Sbjct: 35 MSFASLGLIDPLLRNLQDLNYQTPTPVQVKAIPAVLGGKDVMAGAQTGTGKTAGFALPLL 94 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L+ + P R R L+L PTRELA Q+ ++ Y K L++R L +GGVSINPQMM Sbjct: 95 QRLVQQGPAVSSNR-ARVLVLVPTRELAEQVLQSFVAYGKGLDLRFLAAYGGVSINPQMM 153 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KLR GVDVLVATPGRLLDL QNAV+ DQVE LVLDEADRMLD+GF ++ V LP + Sbjct: 154 KLRKGVDVLVATPGRLLDLNRQNAVQFDQVETLVLDEADRMLDLGFARELNAVFAALPVQ 213 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSATF+DDI+ +A +L +P+ I V+ N ++ Q V VDK+ K +L H++ Sbjct: 214 RQTLLFSATFTDDIRTMAASILRSPVNISVSPPNVTGSKIKQWVVTVDKRNKPDLFMHLV 273 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + NW LVF +T++G +LA L++ G IHG+K Q AR RAL FK+G++++LV Sbjct: 274 AENNWDHALVFVKTRNGVEYLAAMLDEAGYAVDTIHGDKPQPARLRALERFKTGEVQMLV 333 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI++LP V+N +LP V +DYVHRIGRTGRA A+G A+SLVC DE L I Sbjct: 334 ATDVAARGLDIDDLPLVINVDLPIVAQDYVHRIGRTGRAGASGVAVSLVCADEAPQLAAI 393 Query: 361 EKLLKKEIPRIAIPGYEPDPSI 382 E L+ + + R PG+E + + Sbjct: 394 EALIGQTLRREEEPGFEAEHRV 415 >UniRef50_A3EUK2 Putative ATP-dependent helicase n=2 Tax=Leptospirillum sp. Group II RepID=A3EUK2_9BACT Length = 444 Score = 556 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 187/447 (41%), Positives = 265/447 (59%), Gaps = 8/447 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F++LGLSP+ILRA+ + G+ PTPIQ+Q+IP V++GRDL+ AQTGTGKT GF LP+L Sbjct: 1 MTFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + H RAL+L+PTRELA QI + +DY+KYL+ ++++ GGV Q Sbjct: 61 HKIAEGRRHGIRN---RALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQER 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ D++VATPGRLLD +N + L ++++DEADRMLDMGF+ DI ++ +LP Sbjct: 118 NLKRNWDIVVATPGRLLDHVRRNNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPKG 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLSHM 239 RQ+LLFSAT I+ LA ++ + + V SD + Q V +K LL + Sbjct: 178 RQSLLFSATCPPRIQELAATFQNDAVIVRVEPERKGSDHIHQEWITVSHGSQKLGLLKKV 237 Query: 240 IGKGNWQ--QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + +G + QV++FTRTK A L+ LN G S A+HG+KSQ R R L+ F+ GD++ Sbjct: 238 LDEGKSETGQVIIFTRTKRSAEDLSIALNDAGYPSDALHGDKSQPVRNRVLSRFRRGDLK 297 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 VLVATD+AARGLDI+ + HV+NY+LP EDYVHRIGRTGRA TG ALS + ++ Sbjct: 298 VLVATDVAARGLDIDGITHVINYDLPQTAEDYVHRIGRTGRAGRTGRALSFFHPADRDIV 357 Query: 358 RDIEKLLKKEIPRIA--IPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG 415 R IE + K IP IP E + + + RG+ R + + Sbjct: 358 RSIETMAGKPIPHSPHSIPLSEQSLRKTFTRRPSFGRPQDRTPRGENRFRTDRGQQGRPR 417 Query: 416 GAKSASAKPAEKPSRRLGDAKPAGEQQ 442 + S + A PA E++ Sbjct: 418 SSTSGNRFSYGNRKSSQNSATPAHEER 444 >UniRef50_Q0W8H7 ATP-dependent RNA helicase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W8H7_UNCMA Length = 497 Score = 556 bits (1434), Expect = e-157, Method: Composition-based stats. Identities = 151/387 (39%), Positives = 222/387 (57%), Gaps = 6/387 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F L L+P I+RAV E G+ E TPIQ+QAIP +EG+DL+ A+TGTGKTA F +P++ Sbjct: 2 VKFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMV 61 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + + V+ L++ PTRELA Q+ E + K IRS+ ++GG Q+ Sbjct: 62 EAI------RPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVK 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L ++V TPGRLL+ + V+ + I VLDEAD+MLDMGFI + ++L KLP + Sbjct: 116 ALEELPHIVVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLPER 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT S ++ LA K L +P IE Q+ + +K+K E L+ ++ Sbjct: 176 RQTLLFSATLSPPVQMLARKYLKDPELIEFEEEGITVPTTVQYYIEMPEKQKFEALTRLL 235 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + +VF T+ LA+ L + G + +HG+ Q R L FK+G++ +LV Sbjct: 236 DQEKPELAIVFVATRIRVGELAKALVERGYHALGLHGDLLQYQRENTLDKFKAGEVSILV 295 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI+ + HV N+++P P+ YVHRIGRTGRA G A + V + L I Sbjct: 296 ATDVAARGLDIQGVTHVYNFDIPRDPDSYVHRIGRTGRAGNAGTATTFVTPKDKTALEAI 355 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPI 387 E+ + +I PG E + Sbjct: 356 EQAIDHQITSKPAPGGAESTEKNIEAV 382 >UniRef50_D1B384 DEAD/DEAH box helicase domain protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B384_SULD5 Length = 436 Score = 556 bits (1434), Expect = e-157, Method: Composition-based stats. Identities = 196/412 (47%), Positives = 266/412 (64%), Gaps = 3/412 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+ LGLS I AV E GY +PTP+Q + IP VLEG+D+MA+AQTGTGKTA + LPLL Sbjct: 1 MVFEKLGLSEPIRDAVRELGYTKPTPVQNKVIPLVLEGKDVMATAQTGTGKTAAYALPLL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + + + VRALIL PTRELA+Q+G +V+ Y K + + S ++GGV PQ Sbjct: 61 HILNKKTQKSTTSKVVRALILVPTRELASQVGASVQAYGKNVPLSSAAIYGGVKFTPQAK 120 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL G+D+L+ATPGRLL+ V L +VEI+V DEADR+LDMGF +++ +L P K Sbjct: 121 KLDKGIDILIATPGRLLEHVKLGNVDLSRVEIVVFDEADRILDMGFWDEVQTLLGLFPKK 180 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFS S +K L+E L P+ + + + + +V Q ++ VDK+RK ELLS MI Sbjct: 181 RQTLLFSVGLSKSVKRLSEVSLKKPVTVAINNQGDFAKKVEQTLYLVDKERKCELLSFMI 240 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 G NW QVLVFT+TK A+ + E LN G+++ +HG+K+ RT+A+ FK IRVLV Sbjct: 241 GTHNWHQVLVFTKTKQSADEVGEYLNASGLKTLVLHGDKAHSKRTQAIHAFKENAIRVLV 300 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIA+RGLDIE+LP+V+NYELP EDY HR GRTGRA G A+SLV +E ++I Sbjct: 301 ATDIASRGLDIEDLPYVINYELPGDAEDYTHRAGRTGRAGKEGRAISLVAQEEKNKFKEI 360 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQ---NGRQQRGGGGRGQGGGRGQQQ 409 EK+LK I PG+E ++ E + + R + G R +++ Sbjct: 361 EKILKYTIKTEFYPGFETKEWVEKEAKKHTIQAKIDREKANKRPNGLRKKRE 412 >UniRef50_Q31AC4 DEAD/DEAH box helicase-like protein n=9 Tax=Prochlorococcus marinus RepID=Q31AC4_PROM9 Length = 593 Score = 556 bits (1433), Expect = e-157, Method: Composition-based stats. Identities = 151/386 (39%), Positives = 228/386 (59%), Gaps = 7/386 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F G + IL +++ +GY+ PTPIQ+ AIP ++ GRDL+ AQTGTGKTA F LPL++ Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSK-YLNIRSLVVFGGVSINPQMMK 121 L + + L++TPTRELA Q+ E+ + YS N +++ ++GG Q+ Sbjct: 113 LADNKELN-----AKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYA 167 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ VDV+V TPGR++D Q K++ + LVLDEAD ML+MGF+ DI ++ +LP + Sbjct: 168 LKRKVDVVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLEDIEWIIDQLPKNK 227 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q +LFSAT ++I+ +A+K L++P EI + + ++Q +V + K + L ++ Sbjct: 228 QMVLFSATMPNEIRNIAKKYLNDPAEILIKSVKKETQLISQKFLYVQRHHKLDALKRILE 287 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 N + V++F RTK +AE L G A ++G+ Q R + K G I +LVA Sbjct: 288 LNN-EGVIIFVRTKLLTTSIAEALENLGHSVAVLNGDIPQNQRENTVDRLKKGFIDILVA 346 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + VVNY+ P E Y HRIGRTGRA +GEA+ V E LR++E Sbjct: 347 TDVAARGLDVERIKLVVNYDFPFDKETYTHRIGRTGRAGRSGEAILFVNHREKHFLRNLE 406 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPI 387 + +I I IP + + E + Sbjct: 407 NSTRTKIEEINIPSNKIINEKRMEKL 432 >UniRef50_B7P029 Vasa n=9 Tax=Coelomata RepID=B7P029_9BIVA Length = 801 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 151/379 (39%), Positives = 234/379 (61%), Gaps = 11/379 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF+ G+ + + + + +PTP+Q+ +IP V+ GRDLMA AQTG+GKTA F LP+L Sbjct: 353 SFEEAGIYDGFMTNLVKAHFEKPTPVQKYSIPIVMSGRDLMACAQTGSGKTAAFLLPVLT 412 Query: 62 HLITRQPHAKG---RRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 ++ + +AL++ PTRELA QI + R +S +R +V++GG S+ Q Sbjct: 413 GMMKNGLTGSAFSDVQEPQALVVAPTRELALQIFNDARKFSHGTMLRPVVLYGGTSVGYQ 472 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTK-- 176 + ++ G ++V TPGRL+D+ ++ + L +++ L+LDEADRMLDMGF DI++++ + Sbjct: 473 LKQVENGAHIVVGTPGRLIDVINKGKISLAKLKYLILDEADRMLDMGFGPDIKKIVHELG 532 Query: 177 LPAK--RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRE 234 P K RQ L+FSATF ++I+ LA L++ L + V R A VTQH VD+++KR+ Sbjct: 533 TPEKTERQTLMFSATFPEEIQKLAGDFLNDYLFLTVGRVGGACSDVTQHFFQVDRQQKRQ 592 Query: 235 LLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSG 294 L ++ + + LVF K A+ LA L++ G + +IHG++ Q R AL DFK G Sbjct: 593 KLCDILSESGADKTLVFVEQKRNADFLASYLSESGFPTTSIHGDRLQREREEALRDFKQG 652 Query: 295 DIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVD-E 353 +L+AT +AARGLDI + HV+NY+LP ++YVHRIGRTGR G+A S D + Sbjct: 653 KAPILIATSVAARGLDIPNVKHVINYDLPQSIDEYVHRIGRTGRCGNLGKATSFFSEDGD 712 Query: 354 HKLLRDIEKLL---KKEIP 369 L + + ++L ++ IP Sbjct: 713 GSLAKPLMRILVDAQQNIP 731 >UniRef50_UPI0001C33831 DNA/RNA helicase, superfamily II n=3 Tax=Cyanobacteria RepID=UPI0001C33831 Length = 477 Score = 554 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 162/400 (40%), Positives = 247/400 (61%), Gaps = 7/400 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF++LGLS + + E G+ PT IQ++AIP +LEG D++ +QTGTGKTA ++LP+L Sbjct: 3 ISFENLGLSETRVNKLKELGFENPTEIQEKAIPLMLEGHDVLGQSQTGTGKTAAYSLPIL 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + + P V+ LILTPTRELA Q+ E ++D++ + L V+GG SI+ Q+ Sbjct: 63 EKVDIQDPS------VQVLILTPTRELAQQVAEALKDFTVRRRLYILTVYGGQSIDRQIR 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GV ++V TPGR++DL + + LD + VLDEAD ML MGFI D++ +L K P Sbjct: 117 SLERGVQIVVGTPGRVIDLIERKKLILDSLRWAVLDEADEMLSMGFIDDVKTILKKTPES 176 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK-RKRELLSHM 239 R FSAT +I+ L + L +P+ I V R A ++ Q+++ V + KR+ L + Sbjct: 177 RSTACFSATMPREIRELVNQFLKSPVTISVERTQAAPTRIEQNIYMVPRGWSKRKALQPV 236 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + + ++F RTK A+ L +L + G HGN SQ R R + F+ G I+++ Sbjct: 237 LEIEDPESAIIFVRTKQTASDLTTRLQEIGHCVDEYHGNLSQSQRERLVHRFRDGRIKLV 296 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARGLD+E L HV+NY+LP+ E Y+HRIGRTGRA TG+A+S+V + +++R Sbjct: 297 VATDIAARGLDVEGLSHVINYDLPDNSETYIHRIGRTGRAGKTGKAISIVESADRRMIRQ 356 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGR 399 IE+ L+++I IP + + +QN ++ G R Sbjct: 357 IERKLRQKIDICKIPNRSEVEAKRLGKLQNLIKESLIGER 396 >UniRef50_C1AE59 ATP-dependent RNA helicase RhlE n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AE59_GEMAT Length = 498 Score = 554 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 200/433 (46%), Positives = 278/433 (64%), Gaps = 8/433 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F SL L P + + + E G+ PTPIQ +AIP LEGRD++A A TG+GKT F LP+L Sbjct: 3 MTFSSLQLHPSLQQGLKELGFARPTPIQGEAIPPALEGRDVLACAMTGSGKTYAFLLPIL 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L+++ R RAL+LTPTRELAAQI E+++D + + + VFGGV + PQ Sbjct: 63 HQLMSKP-----RGNTRALVLTPTRELAAQILESLQDVTTHTPLTGAAVFGGVGMGPQEH 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP-A 179 R GVDV+VATPGRLLD Q KLDQ+E LVLDEADRMLDMGF+ +I+++L LP Sbjct: 118 AFRSGVDVIVATPGRLLDHFRQPYAKLDQLEYLVLDEADRMLDMGFLPEIKKILRHLPNR 177 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 KRQ L FSAT I AL +++L+ P+ + + R+ + +TQ V+ V ++ K LL + Sbjct: 178 KRQTLFFSATMPPPIAALTQEMLNKPVTLNLQRQAAPAKGITQAVYPVSQELKSALLVAL 237 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + +G+ Q LVFTRTKH AN LA QL GI++ IHGN+SQ RT+ALA FK G +VL Sbjct: 238 LKRGDMPQALVFTRTKHRANRLASQLVTAGIKAERIHGNRSQSQRTQALAGFKDGSYQVL 297 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARG+D+E L HVVN+++P EDY+HR+GRT RA ATGEA + V +E L+ Sbjct: 298 VATDIAARGIDVEALGHVVNFDVPVAAEDYIHRVGRTARAEATGEAFTFVSPEEEGELKL 357 Query: 360 IEKLLKKEIPRIAIPGYEPD--PSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 IE+ +K+ +PR+ +P ++ P+ K E R + + R + R Sbjct: 358 IERAIKRALPRVTVPDFDYHAKPTQKLEVPIAERIAEIRKKKAEDRARAAAKVARRTAAQ 417 Query: 418 KSASAKPAEKPSR 430 +S +A+ + K ++ Sbjct: 418 ESEAARKSAKDAK 430 >UniRef50_Q3IJ60 ATP-dependent RNA helicase, cold shock protein A n=3 Tax=Alteromonadales RepID=Q3IJ60_PSEHT Length = 616 Score = 554 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 157/391 (40%), Positives = 240/391 (61%), Gaps = 8/391 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+SL LSP IL+AV E GY+ P+ IQ Q IP +LE +D++ AQTGTGKTA F LPLL Sbjct: 5 VTFESLNLSPAILKAVEELGYKTPSEIQAQCIPLLLERKDVLGLAQTGTGKTAAFALPLL 64 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 ++ + + L+LTPTRELA Q+ E Y+K++ I L ++GG S + Q+ Sbjct: 65 NNID------PSVKQPQILVLTPTRELAIQVAEAFEQYAKHVRGIEVLALYGGQSYSIQL 118 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 LR G V+VATPGRL+D ++ +K D ++ LVLDEAD ML MGFI D+ ++ K P Sbjct: 119 SALRRGAQVIVATPGRLIDHINRGTIKFDALQALVLDEADEMLRMGFIDDVESIMEKTPR 178 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 ++Q LFSAT I+ ++ K ++NP ++ ++ RN+ V Q K + + Sbjct: 179 EKQTCLFSATMPKQIQNISSKYMNNPEQVHISARNSTVSSVEQVFWNAS-IHKNKAIVRF 237 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++ +VF RT++ LAE L ++G +A ++G+ +Q AR R + KSG + V+ Sbjct: 238 LEAEQYEGAIVFVRTRNDTVQLAELLEREGFSAAPLNGDMNQQARERTVERLKSGMLNVV 297 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 +ATD+AARGLD++ L V+NY++P E YVHRIGRTGRA TG+A+ V +E LL++ Sbjct: 298 IATDVAARGLDVDRLSLVINYDIPQDSEAYVHRIGRTGRAGRTGKAILFVKHNERYLLKN 357 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 I + +I ++ +P + + E +Q Sbjct: 358 IIRHTNSDIAQVELPTAKIVEEKRIEALQAK 388 >UniRef50_A6TTG0 DEAD/DEAH box helicase domain protein n=28 Tax=Firmicutes RepID=A6TTG0_ALKMQ Length = 549 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 161/458 (35%), Positives = 250/458 (54%), Gaps = 18/458 (3%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LG+S +I + + EPTP+Q QAIP +L RD+MA AQTGTGKT F LP+L+ Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + +P ++ALI+TPTRELA QI + ++ I L +GG + Q+ KL Sbjct: 65 VNVEKP------TIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKL 118 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 +G + +++ TPGRLLD + + L ++ +LVLDEAD+ML MGF+ D+ ++T +P +RQ Sbjct: 119 KGSIHIIIGTPGRLLDHLRRKTINLGKLSMLVLDEADQMLHMGFLRDVEDIMTHIPKRRQ 178 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 N+ FSAT + ++ LAE+ + +P++I+V + D++ Q V + K++LL + + Sbjct: 179 NMFFSATMPNQVRTLAEQYMKDPVQIQVQSKRVTLDEIRQVVIETTDRGKQDLLCQLFDE 238 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 N ++F RTK A L E L G S +HG+ +Q R + + FK I+ LVAT Sbjct: 239 YNPFMAIIFCRTKRRAIALNEALINLGYNSDELHGDLTQAKREKVMKAFKKSKIQYLVAT 298 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARGLDIE + H+ NY++P E Y+HRIGRTGRA TG A++ + + L+ IEK Sbjct: 299 DVAARGLDIEGVTHIFNYDIPQDGESYIHRIGRTGRAGETGMAITFMTSRDRDELKIIEK 358 Query: 363 LLK-----KEIPRIAIPGYEPDPSIKAEPIQNGRQQRGG------GGRGQGGGRGQQQPR 411 ++K ++ I E + K P G + G + G + +P Sbjct: 359 VIKMDLDVQKSKSGKIDLDEEEQDTKKSPKGRGNDKSKDFKKGKYGDKKGKPGDKKGRPG 418 Query: 412 RGEGGAKSASAKPAEKPSR-RLGDAKPAGEQQRRRRPR 448 +P +K R +P ++ R + Sbjct: 419 DKRDRPTDKKGRPGDKRDRPSDNKGRPGDKRDRPSDNK 456 >UniRef50_Q9M2F9 DEAD-box ATP-dependent RNA helicase 52 n=13 Tax=Eukaryota RepID=RH52_ARATH Length = 646 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 158/386 (40%), Positives = 225/386 (58%), Gaps = 15/386 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F + L + + Y +PTP+Q+ AIP + GRDLMA AQTG+GKTA F P++ Sbjct: 147 TFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIIS 206 Query: 62 HLITRQPHAKGRRP----VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINP 117 ++ Q + R A+IL+PTRELA QI + R +S ++ +V +GG +N Sbjct: 207 GIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQ 266 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 Q+ +L GVD+LVATPGRL DL + V L V L LDEADRMLDMGF IR+++ ++ Sbjct: 267 QIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQM 326 Query: 178 ----PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKR 233 P RQ +LFSATF +I+ LA L N + + V R +++D + Q V FV KR Sbjct: 327 DMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDSDKR 386 Query: 234 ELLSHMI-------GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTR 286 L ++ +G LVF TK GA+ L L +G + IHG++SQ R Sbjct: 387 SHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREV 446 Query: 287 ALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEAL 346 AL FK+G +LVATD+AARGLDI + HVVN++LPN +DYVHRIGRTGRA +G A Sbjct: 447 ALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLAT 506 Query: 347 SLVCVDEHKLLRDIEKLLKKEIPRIA 372 + + + + + +L+++ + Sbjct: 507 AFFNDNNTTMAKPLAELMQEANQEVP 532 >UniRef50_B6K0K2 ATP-dependent RNA helicase Prp11 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K0K2_SCHJY Length = 1056 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 160/427 (37%), Positives = 244/427 (57%), Gaps = 9/427 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 S+ GLS L + G+ EP+ IQ QAIPA+ GRD++ A+TG+GKT F LP+ + Sbjct: 460 SWSQCGLSVQTLSVIRSLGFEEPSAIQAQAIPAITAGRDVIGVAKTGSGKTIAFLLPMFR 519 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ ++P G PV A+I+TPTRELA QI + ++K L++R+ +GG I Q+ + Sbjct: 520 HIMDQRPLRNGEGPV-AVIMTPTRELAVQIFRECKPFAKALDLRATCAYGGAPIKDQIAE 578 Query: 122 LRGGVDVLVATPGRLLDLEHQNA---VKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ G +++V TPGR++D+ + N+ L + +VLDEADRM D+GF + R+L + Sbjct: 579 LKRGAEIVVCTPGRMIDVLNANSGRVTNLHRCTYVVLDEADRMFDLGFEPQVMRILNNIR 638 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ +LFSATF ++ALA K+L P+EI V R+ + +V Q V ++ K L Sbjct: 639 PDRQVVLFSATFPRAMEALARKVLKKPIEITVGGRSVVAAEVEQLVEVRSEESKFPRLLE 698 Query: 239 MIGK----GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSG 294 ++G+ + LVF A+ L QL K G +IHG K Q R ++D+K G Sbjct: 699 LLGELYNTQPDVRTLVFVDRHESADALLSQLMKRGYSCNSIHGGKDQHDRDSTISDYKMG 758 Query: 295 DIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEH 354 VL+AT +AARGLD++ L VVNY+ PN EDYVHR+GRTGRA TG A++ V D+ Sbjct: 759 IFDVLIATSVAARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFVTPDQS 818 Query: 355 KLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE 414 + I K LK + + + + + +++G+++ G G G G + R E Sbjct: 819 RYAVGIAKALKMSKQPVPLE-LQNLANEFLKNVKSGKEKAAGSGFGGKGLSRLDETRNAE 877 Query: 415 GGAKSAS 421 + + Sbjct: 878 RKMQRRA 884 >UniRef50_A1B2U6 DEAD/DEAH box helicase domain protein n=23 Tax=Rhodobacterales RepID=A1B2U6_PARDP Length = 479 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 195/420 (46%), Positives = 261/420 (62%), Gaps = 9/420 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +G+ + + G P+PIQ+++IP ++ GRDL+ AQTGTGKTA F LP+L Sbjct: 69 FTRMGIDARVAINLPGLGIETPSPIQEKSIPGIVAGRDLLGLAQTGTGKTAAFGLPMLTR 128 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 L+ R RALIL PTRELA QI EN+ +Y+ IR V GG SIN Q+ +L Sbjct: 129 LL-NIGRKPEPRTCRALILAPTRELATQIAENIDNYAIGTPIRQFRVVGGASINVQVQRL 187 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 GVDVL+ATPGRL+DL + A+ L Q LVLDEAD+MLD+GFIH +RR+ LP +RQ Sbjct: 188 ERGVDVLIATPGRLIDLIERGAIDLSQTRYLVLDEADQMLDIGFIHALRRIAKMLPRERQ 247 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 LLFSAT ++ LA+ L++PL + V A++++ Q VHFV++ K LL+ + K Sbjct: 248 TLLFSATMPKLMEELADSYLNDPLRVAVNPPGQAAEKIDQGVHFVNQGDKATLLAEYLSK 307 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 + +VF RTKHG+ L + L+K G + AAIHGNKSQG R RALA F++G+ +VLVAT Sbjct: 308 HVDELAIVFGRTKHGSEKLCKLLDKWGFKVAAIHGNKSQGQRERALASFRAGETKVLVAT 367 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARGLDI ++ HV NY+LPNVPE+YVHRIGRT RA G A++ E LR IEK Sbjct: 368 DVAARGLDIPQVAHVYNYDLPNVPENYVHRIGRTARAGRDGRAIAFCSPTEIGELRAIEK 427 Query: 363 LLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSASA 422 +K +I + G EP + K R++ G GR G R + R + A Sbjct: 428 AMKAKI--AVVGGEEPFEAAKI------RERGGPAGRPAQGARKRPARRPSRAPKTAQRA 479 >UniRef50_Q9VXW2 CG6227 n=20 Tax=Endopterygota RepID=Q9VXW2_DROME Length = 1224 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 142/367 (38%), Positives = 223/367 (60%), Gaps = 5/367 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 ++ G+S + + G+ +PTPIQ QAIPA++ GRDL+ A+TG+GKT F LP+ + Sbjct: 511 TWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFR 570 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ + G + A+I+ PTREL QIG+++R +SK L +R + V+GG I+ Q+ + Sbjct: 571 HILDQPSMEDGDGAI-AIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAE 629 Query: 122 LRGGVDVLVATPGRLLDLEHQNA---VKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ G +++V TPGR++D+ N+ L +V +VLDEADRM DMGF + R++ + Sbjct: 630 LKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVR 689 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ ++FSATF ++ALA ++L P+E+ V R+ +V QHV ++ K L Sbjct: 690 PDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLE 749 Query: 239 MIG-KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++G ++VF + A+ L L K ++HG Q R + DFKSG +R Sbjct: 750 LLGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVR 809 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +L+AT +AARGLD+++L VVNY++PN EDYVHR GRTGRA G A + + ++ + Sbjct: 810 LLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYA 869 Query: 358 RDIEKLL 364 DI + + Sbjct: 870 GDIIRAM 876 >UniRef50_Q0K893 ATP-dependent RNA helicase n=129 Tax=Proteobacteria RepID=Q0K893_RALEH Length = 646 Score = 553 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 188/475 (39%), Positives = 252/475 (53%), Gaps = 34/475 (7%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +LGL ILRA++E Y PTP+Q QAIPA L GRDL+ S+QTG+GKTA F LP +Q Sbjct: 60 FATLGLDAAILRALSELNYNTPTPVQAQAIPAFLAGRDLLVSSQTGSGKTAAFMLPAIQR 119 Query: 63 LITRQ---------PHAKGRRP------VRALILTPTRELAAQIGENVRDYSKYLN-IRS 106 + KG+RP L+LTPTRELA Q+ E Y + L I Sbjct: 120 ISEMPAPQRATEPAKRMKGKRPRPSPAQPALLVLTPTRELALQVTEAAAKYGRNLRRIVC 179 Query: 107 LVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGF 166 + GG+ Q+ L D+LVATPGRLLD + L +++LV DEADRMLDMGF Sbjct: 180 ASILGGMPYPKQLAALAKMPDILVATPGRLLDHIDAGRIDLSALQMLVFDEADRMLDMGF 239 Query: 167 IHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHF 226 DI ++ PA RQ L+FSAT I LA + L +P IE+A + Q +HF Sbjct: 240 ADDIDAIVNATPATRQTLMFSATLDARIAQLASRQLRDPQRIEIAAARADQSHIEQRLHF 299 Query: 227 VDK-KRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGART 285 D K LL H++ +Q +VFT TK A+ LAE+L+ G + A+HG+ +QGAR Sbjct: 300 TDDMSHKERLLDHLLRDATLKQAIVFTATKRDADSLAERLSDTGFSAGALHGDMTQGARN 359 Query: 286 RALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEA 345 R L + G++RVLVATD+AARG+D+ ++ HVVN++LP EDYVHRIGRTGRA +G A Sbjct: 360 RTLTALRRGNLRVLVATDVAARGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGTA 419 Query: 346 LSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAE-----------------PIQ 388 ++LV ++ + IE+ + I I G EP S K Sbjct: 420 INLVNHNDMFQWKRIERFTNQRIDASVIEGLEPRRSPKPRSNFGGKPGGGRGDFRGNGGG 479 Query: 389 NGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQR 443 +R G R GGG + + +S + +R GD G R Sbjct: 480 YRGGERSFGDRKFGGGESRTGFGERKFSGESRGFGNRPEGARPFGDDNRGGFGNR 534 >UniRef50_Q3AX69 DEAD/DEAH box helicase-like n=18 Tax=cellular organisms RepID=Q3AX69_SYNS9 Length = 624 Score = 553 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 152/396 (38%), Positives = 235/396 (59%), Gaps = 7/396 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 FD G S +L+ +A++GY +P+PIQ+ A P ++ GRDL+ AQTGTGKTA F LPLL+ Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSK-YLNIRSLVVFGGVSINPQMMK 121 L G++ + L+L PTRELA Q+ ++ + Y+ + +++ L V+GG Q+ Sbjct: 133 L------ESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRSQIST 186 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GVDV+V TPGR++D Q + + LVLDEAD ML MGFI D+ +L +LP +R Sbjct: 187 LRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEMLRMGFIDDVEWILEQLPKER 246 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q +LFSAT +I+ L+++ L++P E+ + ++ + Q V K E L ++ Sbjct: 247 QVVLFSATMPPEIRRLSKRYLNDPAEVTIKTKDQDGKLIRQRAITVPMSHKLEALQRVLD 306 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + V++F RTK +AE L G + A ++G+ Q R R + +SG + VLVA Sbjct: 307 ACGGEGVIIFARTKVITLTVAETLEAAGHQVAVLNGDVPQNQRERTVERLRSGSVDVLVA 366 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + V+NY++P E YVHRIGRTGRA TGEA+ + E + +R++E Sbjct: 367 TDVAARGLDVERIGLVINYDMPFDSEAYVHRIGRTGRAGRTGEAVLFMTPRERRFIRNLE 426 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGG 397 + + I + +PG + + ++ + G Sbjct: 427 RATGQPIEMMEVPGNTAINQGRLDRLRKRLSEAANG 462 >UniRef50_Q7NHM7 Gll2508 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NHM7_GLOVI Length = 437 Score = 552 bits (1425), Expect = e-156, Method: Composition-based stats. Identities = 164/392 (41%), Positives = 240/392 (61%), Gaps = 6/392 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +LGLS +++A+ E G+ +PTPIQ ++IP +L+GRDL+A AQTGTGKTA F LPL+ Sbjct: 5 FSALGLSESVVKALDELGFEQPTPIQLKSIPFLLDGRDLLAQAQTGTGKTAAFGLPLVDR 64 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 V+AL+L PTRELA Q+ E + YSK+ +R L ++GG I+ QM +L Sbjct: 65 ------SDPQDARVQALVLAPTRELAVQVCEAIHTYSKHSGVRVLPIYGGQPIDRQMRRL 118 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 R G ++V TPGR+LDL + ++ L + LVLDEAD+MLDMGFI +++ +L P +RQ Sbjct: 119 RAGAQIVVGTPGRVLDLMRRGSLDLSALRTLVLDEADQMLDMGFIEEVQTILDAAPPERQ 178 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 + FSAT I+ LA + L P+ + + + + Q V+FV+ K + + L+ ++ Sbjct: 179 LVFFSATLPASIRKLAARHLRTPMTLTMPAEERDTPAIAQRVYFVNFKNRAQALTRVLAA 238 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 + L+FTRTK A+ LAEQL DG R+ A+HG+ +Q AR L F+ + V+VAT Sbjct: 239 EDPASALIFTRTKQAADELAEQLQDDGHRAEALHGDLNQSAREAVLGRFRRQQLNVVVAT 298 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARGLDI +L HV+NY++P E Y+HRIGRTGRA TG A+S + LR IE+ Sbjct: 299 DVAARGLDIADLSHVINYDMPQDGESYIHRIGRTGRAGRTGVAISFALPTDRYRLRLIER 358 Query: 363 LLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQR 394 + IP + E + +++ Sbjct: 359 ATGSTLVPAKIPSAGEIQVRRTERLVEQLRRQ 390 >UniRef50_A8WWC4 C. briggsae CBR-VBH-1 protein n=2 Tax=Caenorhabditis briggsae RepID=A8WWC4_CAEBR Length = 692 Score = 552 bits (1425), Expect = e-156, Method: Composition-based stats. Identities = 162/402 (40%), Positives = 233/402 (57%), Gaps = 33/402 (8%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F G P ++ V GY +PTP+Q+ +IP +L RDLM+ AQTG+GKTA F LP++Q Sbjct: 164 NFSDAGFGPAVMENVTRSGYTKPTPVQKHSIPTLLFNRDLMSCAQTGSGKTAAFLLPIIQ 223 Query: 62 HLIT----------------------RQPHAKGRRP--VRALILTPTRELAAQIGENVRD 97 H++ + GRR AL+L+PTRELA QI + Sbjct: 224 HIMAGGPDMIKTVSSATNIFGFKVILQPTFNNGRRTYYPSALVLSPTRELAIQIHKEAAK 283 Query: 98 YSKYLNIRSLVVFGG-VSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLD 156 +S N+++ +++GG + Q+ +LR GV +L+ATPGRL+D+ Q + L LVLD Sbjct: 284 FSYKTNLQTAILYGGRENYRDQVNRLRSGVHILIATPGRLIDIIEQGFIGLSGCRYLVLD 343 Query: 157 EADRMLDMGFIHDIRRVLTK-LPAK--RQNLLFSATFSDDIKALAEKLLH-NPLEIEVAR 212 EADRMLDMGF IR+++ + +P K R +FSATF +I+ LA+ L N + + V R Sbjct: 344 EADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQLLAKDFLKENYVFLAVGR 403 Query: 213 RNTASDQVTQHVHFVDKKRKRELLSHMIGKGN-WQQVLVFTRTKHGANHLAEQLNKDGIR 271 + S+ + Q + +V++ KR+ L ++ + VLVF TK GAN LA LN+ IR Sbjct: 404 VGSTSENIEQRLLWVNEMEKRQNLMDILMNEDATNLVLVFVETKRGANELAYFLNRQQIR 463 Query: 272 SAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVH 331 S +IHG+ Q R R L F+SG +LVAT +AARGLDI + HVVNY+LP ++YVH Sbjct: 464 SVSIHGDLKQIERERNLEMFRSGQFPILVATAVAARGLDIPNVRHVVNYDLPGDSDEYVH 523 Query: 332 RIGRTGRAAATGEALSLVCVDEHKLLRDIEKLL---KKEIPR 370 RIGRTGR G A S + RD++ L+ +E+P Sbjct: 524 RIGRTGRCGNLGIATSFFNDKNRGIGRDLKTLIMEANQEVPE 565 >UniRef50_Q8YXJ0 ATP-dependent RNA helicase n=24 Tax=Cyanobacteria RepID=Q8YXJ0_ANASP Length = 513 Score = 552 bits (1424), Expect = e-156, Method: Composition-based stats. Identities = 158/400 (39%), Positives = 242/400 (60%), Gaps = 7/400 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF LG+S + + + + G+ PT IQ QAIP +L GRD++ +QTGTGKTA F+LP+L Sbjct: 3 LSFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPIL 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L +Q + V+A++LTPTRELA Q+ + + + +R+L ++GG SI+ QM+ Sbjct: 63 ERLDPQQ------KAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQML 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L+ GV ++V TPGR++DL + +KLDQV+ VLDEAD ML MGFI D+ ++L++ P Sbjct: 117 QLKRGVHIVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQD 176 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK-RKRELLSHM 239 RQ LFSAT I+ L K L +P+ + V + +++ Q + + + K L + Sbjct: 177 RQTALFSATMPPSIRMLVNKFLRSPVTVTVEQPKATPNKINQVAYLIPRHWTKARALQPI 236 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + + L+F RT+ A L QL G HG+ SQ AR R L F+S +R + Sbjct: 237 LEMEDPETALIFVRTRRTAAELTSQLQAAGHSVDEYHGDLSQQARERLLTRFRSRQVRWV 296 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARGLD+++L HV+NY+LP+ E YVHRIGRTGRA G A++LV E + + Sbjct: 297 VATDIAARGLDVDQLSHVINYDLPDSVETYVHRIGRTGRAGKEGTAITLVQPFERRKQQI 356 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGR 399 E+ +++ ++IP + +Q ++ G R Sbjct: 357 FERHVRQNWQLLSIPTRAQIEARHILKLQEQVREALAGER 396 >UniRef50_Q725W5 ATP-dependent RNA helicase, DEAD/DEAH family n=3 Tax=Desulfovibrio vulgaris RepID=Q725W5_DESVH Length = 532 Score = 552 bits (1424), Expect = e-156, Method: Composition-based stats. Identities = 166/375 (44%), Positives = 228/375 (60%), Gaps = 7/375 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF L L ++L+A+ E G+ EP+PIQ AIP +LEGRD++ AQTGTGKTA F LPLLQ Sbjct: 6 SFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQ 65 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 + R V+AL+L PTRELA Q+ + +K+L +R L V+GG I PQ Sbjct: 66 RIDA------ADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQAS 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR G V+V TPGR+LD ++ ++L V + VLDEAD MLDMGF DI R+L+++P Sbjct: 120 ALRRGAQVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMPEW 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q+ FSAT D I LA + L P + V RR Q V R+ + + + Sbjct: 180 VQSAFFSATMPDGILELARRFLREPELLRVTRRQLTVANTEQAWFEVRPFRRVDAVCRIF 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++ +VF TK G + LA L + GI + A+HG+ +Q R R ++ F++G I VLV Sbjct: 240 DAYIPRKAIVFRATKQGVDELAAALQQRGILADALHGDLNQTQRERVMSRFRAGGISVLV 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD++++ V+N++LPN PE YVHRIGRTGRA TG A S + LRDI Sbjct: 300 ATDVAARGLDVDDVDTVINFDLPNDPETYVHRIGRTGRAGRTGRAFSFAAGRDVYKLRDI 359 Query: 361 EKLLKKEIPRIAIPG 375 +++ I R A+P Sbjct: 360 QRVTGSRIDRRAMPT 374 >UniRef50_P44586 Cold-shock DEAD box protein A homolog n=29 Tax=Pasteurellaceae RepID=DEAD_HAEIN Length = 613 Score = 552 bits (1424), Expect = e-156, Method: Composition-based stats. Identities = 150/375 (40%), Positives = 228/375 (60%), Gaps = 7/375 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+ LGL IL+AV++ G+ P+PIQQ IP +L G D++ AQTG+GKTA F LPLL Sbjct: 5 ITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLL 64 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 + + + L++ PTRELA Q+ + + KY R + ++GG + Q+ Sbjct: 65 AQID------PSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQL 118 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ G V+V TPGR+LD + + L ++ +VLDEAD ML MGFI D+ V+ +LP Sbjct: 119 RALKQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPE 178 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 Q LFSAT + I+ + ++ +++P E+++ N + + Q +V RK E L Sbjct: 179 NHQTALFSATMPEPIRRITKRFMNDPQEVKIKVNNENAPDIDQSCWYVHGVRKNEALLRF 238 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++ ++F RTK G + E L K+G RSAA++G+ +Q R + L ++G + ++ Sbjct: 239 LEVEDFDAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDIV 298 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+DIE + VVNY++P E YVHRIGRTGRA +G AL V E +LLR+ Sbjct: 299 VATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLRN 358 Query: 360 IEKLLKKEIPRIAIP 374 IE L+KK I + +P Sbjct: 359 IEHLMKKGINEVELP 373 >UniRef50_A8TFK3 DEAD/DEAH box helicase domain protein n=1 Tax=Methanococcus voltae A3 RepID=A8TFK3_METVO Length = 584 Score = 552 bits (1424), Expect = e-156, Method: Composition-based stats. Identities = 153/377 (40%), Positives = 228/377 (60%), Gaps = 3/377 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGR-DLMASAQTGTGKTAGFTLPL 59 M F L +S I+ + E+G+ E T IQ++AIP VL+ D++ AQTGTGKT F +P+ Sbjct: 1 MEFRDLNISESIMERLDEKGFTEATQIQEKAIPIVLDTELDVVGQAQTGTGKTLAFGIPI 60 Query: 60 LQHLITR--QPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINP 117 +Q + + + K ++ V+A+ILTPTRELA Q+ + + +K +R V+GG SI Sbjct: 61 IQKIQEKIEENGRKNKKAVKAIILTPTRELALQVHDEIDSVNKGNKLRLCTVYGGQSIEK 120 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 Q+ KLR GVD+++ TPGR++D + +KL++++ LVLDEAD ML++GFI D+ +++K Sbjct: 121 QINKLRNGVDIVIGTPGRVIDHLGRRTLKLNEIDFLVLDEADEMLNLGFIDDVEEIMSKC 180 Query: 178 PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 + LLFSAT I L E + I V + ++ Q + V + K ELL Sbjct: 181 KEDCRKLLFSATLPKSIMELVELHMGEYETIRVKSKALTTELTEQIYYEVKEHDKFELLR 240 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 +I K LVF +TK + L +LN + S A+HG+ +Q R AL+ FKS I Sbjct: 241 RIIDKEPGFYGLVFCKTKADVDQLMRRLNDENYSSEALHGDMNQKQRELALSRFKSHKID 300 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +++ATD+AARG+DI EL HV+NY++P PE YVHRIGRTGRA G A++ V E + Sbjct: 301 IMIATDVAARGIDINELTHVINYDIPQNPEAYVHRIGRTGRAGNKGTAITFVEPREFRRF 360 Query: 358 RDIEKLLKKEIPRIAIP 374 + I K+ K + + IP Sbjct: 361 KYIMKISKSDAKKEKIP 377 >UniRef50_D2V713 ATP-dependent RNA helicase n=1 Tax=Naegleria gruberi RepID=D2V713_NAEGR Length = 629 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 157/392 (40%), Positives = 233/392 (59%), Gaps = 18/392 (4%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L P +++ + G+ +PTP+Q+ +IP VL GRDL++ AQTG+GKT F P++ + Sbjct: 154 FKEANLPPKLMQNIERAGFGKPTPVQKHSIPIVLAGRDLLSCAQTGSGKTCAFLFPIISN 213 Query: 63 LITRQPHAKGRRPVR----------ALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGG 112 L+T+ + LI+ PTREL+ QI + R ++ + R++V +GG Sbjct: 214 LMTQPGYETVMPHPELMDTLVTCPSVLIMAPTRELSTQIYDESRKFTYHTGRRTVVAYGG 273 Query: 113 VSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRR 172 +I Q+ +L G D+LVATPGRL+DL + ++ L V+ LVLDEADRMLDMGF IR Sbjct: 274 AAIQYQLKQLERGCDILVATPGRLVDLIDRGSISLHNVQYLVLDEADRMLDMGFEPQIRY 333 Query: 173 VLTKL----PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVD 228 ++ K P +R L+FSATF +I+ LA LHN L + V R + + + Q + Sbjct: 334 IVEKTGMPAPGQRITLMFSATFPKNIQTLARDFLHNNLNLTVGRVGSTHENILQKFVYCK 393 Query: 229 KKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRAL 288 KR+L+ I LVF +TK A+ L L K+G +S++IHG+K+Q R AL Sbjct: 394 DDEKRDLMLEAIASVET-LTLVFVKTKKEASILEYFLMKNGFKSSSIHGDKTQRERETAL 452 Query: 289 ADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSL 348 +F+ G +LVATD+A+RGLDI ++ HV+NY+LP EDYVHRIGRTGRA TG + S Sbjct: 453 ENFRRGITPILVATDVASRGLDINDVGHVINYDLPENIEDYVHRIGRTGRAGNTGISTSF 512 Query: 349 VCVDEHKLLRDIEKLL---KKEIPRIAIPGYE 377 +++ D+ +L K+E+P + G + Sbjct: 513 FTDKNNQIADDLITVLEEAKQEVPPFIVEGRD 544 >UniRef50_B6IS62 DEAD/DEAH box helicase protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IS62_RHOCS Length = 528 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 194/483 (40%), Positives = 265/483 (54%), Gaps = 36/483 (7%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF LGL P +L+AV E G+ PTPIQQQA+PA L GRD++ASA TGTGKTA F LP L Sbjct: 8 VSFSDLGLLPHLLKAVEELGFTTPTPIQQQALPAALTGRDVVASANTGTGKTAAFVLPSL 67 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q + T P R L+LTPTRELA+Q+ E+VR+ SK+ I++ + GG+ Q+ Sbjct: 68 QRIATTARAEAAWGP-RVLVLTPTRELASQVLESVRNLSKFGRIQTGTILGGMPYRQQLE 126 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR VD++VATPGRL+D + + L VE+LVLDEADRMLDMGF + + PA+ Sbjct: 127 MLRRRVDLIVATPGRLMDHMERGRLDLSGVEVLVLDEADRMLDMGFREAVEFIAAACPAE 186 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLSHM 239 RQ LLF+AT + LA+ L +P+ I+VA + + QV Q D + K LL + Sbjct: 187 RQTLLFTATLDRTAERLAQTLTRDPVRIDVAGKAVVTAQVEQRWLRADGLEHKHRLLETL 246 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 +G + + +VF TK A+ LA+ L++ G ++ +HG+ Q R R + + G I V+ Sbjct: 247 LGGEEFGKGIVFIATKLDADRLADTLSEKGHKAMPLHGDMQQRDRNRVVQWLRDGRINVI 306 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+DI +L HV+N++LP EDYVHRIGRTGRA A+G + SL E + +R Sbjct: 307 VATDVAARGIDIADLTHVINFDLPKQAEDYVHRIGRTGRAGASGVSYSLFTRMEWRQVRA 366 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEP--------------------------IQNGRQQ 393 IE K +PG EP P + P R Sbjct: 367 IEAYTNKAADMHVLPGLEPMPEPERRPGGFNKGRPGGGKPGFKGRGFGGGNGGGGGYRGN 426 Query: 394 RGGGGRGQGGGRGQQQP--RRGEGGAKSASAKPAEKPSR------RLGDAKPAGEQQRRR 445 R G R G +P R +G A++P R +P GE+ R Sbjct: 427 RPWGERRDGERSFGDRPFGDRPQGDRPHGDRPHADRPHGERSFGDRPHGDRPQGERFRND 486 Query: 446 RPR 448 RPR Sbjct: 487 RPR 489 >UniRef50_B0SU57 ATP-dependent RNA helicase, DEAD-box family (DeaD) n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SU57_LEPBP Length = 534 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 154/385 (40%), Positives = 229/385 (59%), Gaps = 7/385 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F S GL P+IL+ + E G+ P+PIQ+QAIP VLEG+DL+A AQTGTGKTA + LP L Sbjct: 17 FQSFGLRPEILQGITEAGFESPSPIQKQAIPLVLEGKDLIAQAQTGTGKTAAYGLPCLNR 76 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + K ++ L+LTPTRELA Q+ + + K+L I++ ++GG S + Q+ ++ Sbjct: 77 I-------KVEDGMQVLVLTPTRELALQVSDELFKLGKHLGIKTTTIYGGSSYSKQITQV 129 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 G V VATPGRLLDL +K + +++LDEAD MLDMGF+ DI + LP KRQ Sbjct: 130 AKGAQVAVATPGRLLDLLKGKELKNFKPSMVILDEADEMLDMGFMDDIESIFNLLPTKRQ 189 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 LLFSAT + IK LA K +P +++A +S + Q + +D+ + + ++ Sbjct: 190 TLLFSATMPEPIKKLASKYQTHPAHVKIAATEKSSKNIEQVYYIIDEAEREIAVVRILDY 249 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 N + ++FT+TK A+ L L+ G A+HG+ +Q R + L G +++LVAT Sbjct: 250 ENPFKAIIFTKTKKEADDLKSTLSFKGYPVEALHGDLNQKQREQVLKSLHDGRVKILVAT 309 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARGLD+++L V+NY LP E Y HRIGRTGRA +G+A++LV E + L ++ Sbjct: 310 DVAARGLDVKDLSLVINYHLPFDSESYTHRIGRTGRAGKSGKAVTLVTTRESRALLRLKG 369 Query: 363 LLKKEIPRIAIPGYEPDPSIKAEPI 387 + A+P + + E Sbjct: 370 TSGTNLTIAALPTKKEVHLSREEDF 394 >UniRef50_B9SM44 Dead box ATP-dependent RNA helicase, putative n=2 Tax=Magnoliophyta RepID=B9SM44_RICCO Length = 650 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 164/390 (42%), Positives = 230/390 (58%), Gaps = 20/390 (5%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F + L + + Y +PTP+Q+ AIP L GRDLMA AQTG+GKTA F P++ Sbjct: 189 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIIS 248 Query: 62 HLITRQPHAKGRRPVR--------ALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGV 113 ++ Q + +RP+R ALIL+PTREL+ QI E R +S ++ +V +GG Sbjct: 249 GIMKMQGQS-AQRPLRGARMVYPLALILSPTRELSMQIHEEARKFSYQTGVKVVVAYGGA 307 Query: 114 SINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRV 173 IN Q+ +L GVD+LVATPGRL+DL + V L V L LDEADRMLDMGF IR++ Sbjct: 308 PINQQLRELERGVDILVATPGRLVDLLERARVSLQMVRYLALDEADRMLDMGFEPQIRKI 367 Query: 174 LTK----LPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK 229 + + P RQ +LFSATF +I+ LA L N + + V R +++D + Q V FV + Sbjct: 368 VEQNDMPRPGARQTMLFSATFPKEIQRLATDFLFNYIFLAVGRVGSSTDLIIQRVEFVQE 427 Query: 230 KRKRELLSHMIG-------KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQG 282 KR L ++ +G LVF TK GA+ L L +G + +IHG++SQ Sbjct: 428 SDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADSLEHWLYVNGFPATSIHGDRSQQ 487 Query: 283 ARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAAT 342 R +AL F+SG+ +LVATD+AARGLDI + HVVN++LPN +DYVHRIGRTGRA + Sbjct: 488 EREQALRSFRSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS 547 Query: 343 GEALSLVCVDEHKLLRDIEKLLKKEIPRIA 372 G A + L + L+++ + Sbjct: 548 GLATAFFNEGNASLAMALADLMQESNQEVP 577 >UniRef50_B1ZWV2 DEAD/DEAH box helicase domain protein n=9 Tax=Verrucomicrobia RepID=B1ZWV2_OPITP Length = 409 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 186/414 (44%), Positives = 258/414 (62%), Gaps = 7/414 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F +L LS +LR V GY +PTPIQ +AIP VL G DL+ SAQTGTGKTA F LP+L Sbjct: 1 MPFKALQLSAPVLRGVVAAGYTDPTPIQLRAIPVVLGGGDLIGSAQTGTGKTAAFALPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L A R R L+L PTRELAAQ+ RD++++ ++R++ VFGGV Q Sbjct: 61 TRL-----GAHAARAPRVLVLEPTRELAAQVETAFRDFARFTDLRTVAVFGGVGYGLQRT 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L+ GVDV+VATPGRL+D H + L VEILVLDE DRMLDMGF+ ++ ++ + P + Sbjct: 116 ELKRGVDVIVATPGRLMDYLHDRTINLQGVEILVLDEVDRMLDMGFLPVVKDIIQRCPRQ 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ L FSAT +I+A+A L NP +EV + ++ V ++ V +K ELL ++ Sbjct: 176 RQTLFFSATVPPEIQAVASFALRNPTRVEVGVNRSVNESVKHALYPVAADQKFELLEALL 235 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + ++ VLVF+RTKHGA+ +A +L A +H N+SQ R ALA FKSG ++V Sbjct: 236 ARTDFDSVLVFSRTKHGADKIARKLKAANHSVAVLHANRSQNQRIEALAGFKSGKYEIMV 295 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ + HV+NY++P PEDYVHRIGRTGRA A G+A +LV + +RDI Sbjct: 296 ATDIAARGIDVAGVSHVINYDVPEKPEDYVHRIGRTGRAQAVGDAFTLVTPENAHDVRDI 355 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGG--GGRGQGGGRGQQQPRR 412 E+ + ++IP + + G+ P + P + G G G + + RR Sbjct: 356 ERFIGQKIPELRLAGFSYRPFVARPPQVQPPRPPGSLPGQIRHKGSFNRYRGRR 409 >UniRef50_C9RIQ5 DEAD/DEAH box helicase domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RIQ5_FIBSS Length = 802 Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 152/391 (38%), Positives = 233/391 (59%), Gaps = 7/391 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++FD LGLSP++L AV GY P+PIQ +AIPA+L+G +L+ +AQTGTGKTA F+LPLL Sbjct: 124 VTFDDLGLSPEVLEAVKLAGYETPSPIQAKAIPALLQGANLLGTAQTGTGKTAAFSLPLL 183 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYS-KYLNIRSLVVFGGVSINPQM 119 + R L+LTPTRELA Q+ + ++ Y+ K N+ + V+GG I Q+ Sbjct: 184 SRINFNG------RETSMLVLTPTRELAIQVSDAIQQYAVKMQNVTVVPVYGGQDIAIQL 237 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ ++VATPGRL+D + ++ L V+ +VLDEAD MLDMGF+ D+ +L ++PA Sbjct: 238 RALKRKASIVVATPGRLIDHIKRGSISLGAVKAIVLDEADEMLDMGFMEDVETILKEIPA 297 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 Q LFSAT D +K + ++ L E + + T + + Q V + K E L+ + Sbjct: 298 DAQRALFSATMPDSVKKIIDQHLGEYEEARIEGKTTTVENICQRYLLVKNEHKIEALARV 357 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + VL+F RTK +AE+L G A ++G+ +Q R R + K G + ++ Sbjct: 358 LEGEEFDGVLIFVRTKQNTTEVAEKLESRGFNVAPLNGDLAQSMRERTINRLKMGKLDIV 417 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D++ + VVNY++P E YVHRIGRTGRA +G A+ + E ++L+ Sbjct: 418 VATDVAARGIDVDRISLVVNYDIPYDTESYVHRIGRTGRAGRSGNAILFITPREKRMLKT 477 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 IEK ++ I + +P E + + + Sbjct: 478 IEKATRQPIDVMEMPTSEQISKKRVDAFKAK 508 >UniRef50_C8PWG8 Cold-shock DEAD box protein A homolog n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWG8_9GAMM Length = 777 Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 177/460 (38%), Positives = 255/460 (55%), Gaps = 18/460 (3%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +LGLS +L+++ GY PTPIQ +AIPA LEGRDL+ SAQTG+GKTA F LP+L Sbjct: 71 FTALGLSGSLLKSIVATGYTTPTPIQARAIPAALEGRDLLLSAQTGSGKTAAFVLPILHQ 130 Query: 63 LITRQPHAKG-------------RRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLV 108 L Q K + V+ALILTPTRELA Q+ +++R Y + ++ S+ Sbjct: 131 LSELQAKEKAAEKTASGKRGRQQPKVVQALILTPTRELANQVQDSIRKYGSAMKDLYSVP 190 Query: 109 VFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIH 168 + GG + + Q+ L+ GV ++VATPGRLLD + V L + +LVLDEADRMLDMGF Sbjct: 191 LVGGAAYSGQIRALKKGVQIIVATPGRLLDHINAQRVNLSDLTMLVLDEADRMLDMGFAD 250 Query: 169 DIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVD 228 DI +L PA RQ ++ SAT+ + +AE +P I + + + + V+F D Sbjct: 251 DINAILEATPAHRQTIMSSATWDGPVGKIAESFTKDPERINI---KVETAHIDEKVYFCD 307 Query: 229 K-KRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRA 287 K +LL +I Q ++FT TK + +AE+L + ++ +HG+ Q R R Sbjct: 308 NFDHKNKLLEQLICDPERGQAIIFTATKRSSEEVAERLQQWDHKACYLHGDLPQSKRNRI 367 Query: 288 LADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALS 347 ++D +SG ++VATD+AARGLD+ + HV NY+LP EDYVHRIGR+GRA TG A++ Sbjct: 368 VSDLRSGKFDIVVATDVAARGLDLPNITHVFNYDLPRQVEDYVHRIGRSGRAGRTGIAIN 427 Query: 348 LVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQ 407 L D+ + +I + LK++I + G EP K E + G G G Sbjct: 428 LCSRDDRRQFGNIARYLKRDINEAQVEGLEPRFVEKFEGRGKPNGRDGRGRGRSGSDSRG 487 Query: 408 QQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRP 447 + RG + A + RR D Q+R +P Sbjct: 488 GRDDRGSRSQRFAGSSDRPSSERRFADKPRFDNQERYGKP 527 >UniRef50_Q8SRB2 ATP-dependent RNA helicase DBP2 n=18 Tax=Fungi/Metazoa group RepID=DBP2_ENCCU Length = 495 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 149/409 (36%), Positives = 232/409 (56%), Gaps = 6/409 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F+ G S +++ ++ E+G+ EPT IQ Q P L GRD++ AQTG+GKT F LP L H Sbjct: 89 FEEAGFSSEVVSSLVEKGFSEPTAIQGQGWPMALSGRDMVGIAQTGSGKTLSFILPALVH 148 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 +QP +G P+ L+L PTREL QI + V ++ N+RS V+GG S PQ+ L Sbjct: 149 AKDQQPLRRGDGPI-VLVLAPTRELVMQIKKVVDEFCGMFNLRSTAVYGGASSQPQIRAL 207 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 G +V++ATPGRL+DL Q L +V LVLDEADRMLDMGF +R+++ K A RQ Sbjct: 208 HEGAEVVIATPGRLIDLHDQGHAPLSRVTFLVLDEADRMLDMGFEPQLRKIIPKTNANRQ 267 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMIG 241 L++SAT+ +++ LAE ++ +++ V + ++ Q V + K + L ++ Sbjct: 268 TLMWSATWPREVRGLAESYMNEYIQVVVGNEELKTNSKIKQIVEVCSGREKEDKLIGVLD 327 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 +V+VF K + L LN+ G +AA+HG+KSQ R + L DF+SG +L+A Sbjct: 328 NFKGDKVIVFCNMKRTCDDLEYVLNRSGYGAAALHGDKSQNIRDKVLDDFRSGRRPILIA 387 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAA-ATGEALSLVCVDEHKLLRDI 360 T++A RGLD+ ++ V+N++ P EDYVHRIGRT R G + + V + R++ Sbjct: 388 TEVAGRGLDVNDVKLVINFDFPGSCEDYVHRIGRTARGNTKEGISHTFFTVGDKANAREL 447 Query: 361 EKLLKKEIPRIAIPG-YEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQ 408 ++L++ +P E + + + + G RG+ G + Sbjct: 448 IRMLREA--NQTVPSDLEDMVRVSNDRYGSRSTRHGYDYRGRAGRFPYR 494 >UniRef50_A6DIU5 Probable ATP dependent RNA helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DIU5_9BACT Length = 537 Score = 550 bits (1418), Expect = e-155, Method: Composition-based stats. Identities = 148/388 (38%), Positives = 225/388 (57%), Gaps = 7/388 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEG-RDLMASAQTGTGKTAGFTLPLLQ 61 F +LGL P I + + +G++EP+PIQ+QAIP +L D++ AQTGTGKTA F LP++Q Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQ 63 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + G + +ALIL PTRELA Q+ E ++ + K I ++ ++GG I Q Sbjct: 64 KI------EPGLKKPQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRA 117 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GVD++VATPGR + ++LD +E LVLDEAD ML+MGF+ D+ +VL P R Sbjct: 118 LKKGVDLVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASPDDR 177 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 L+FSAT +K +AE +HN + I+ + + Q V+ + K L ++ Sbjct: 178 TVLMFSATMPPRLKKIAESYMHNSITIKAKSETMTMETIDQVVYEAYPENKFAALCRIMD 237 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 ++F RTK ++ L +G + IHG+ +Q +R R L F++ +I +L+A Sbjct: 238 LEKDFYGIIFCRTKVEVEKVSAGLANEGYAADYIHGDVAQESRERLLKRFRNRNISLLIA 297 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARG+D+ +L H+VN+ LP E YVHRIGRTGRA TG A++L+ E + IE Sbjct: 298 TDVAARGIDVTDLSHIVNFSLPEQFESYVHRIGRTGRAGKTGTAITLITPKERSKMSFIE 357 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQN 389 K + R +P E ++ + + Sbjct: 358 KKTGAKTERRKLPFGEEMIKLRIQKLSK 385 >UniRef50_B0SYC6 DEAD/DEAH box helicase domain protein n=33 Tax=Alphaproteobacteria RepID=B0SYC6_CAUSK Length = 678 Score = 550 bits (1418), Expect = e-155, Method: Composition-based stats. Identities = 188/471 (39%), Positives = 260/471 (55%), Gaps = 23/471 (4%) Query: 1 MS-FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPL 59 M+ F LGLSP L+AVA+ GY TPIQ AIP L G+D++ AQTGTGKTA FTLPL Sbjct: 1 MTEFSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPL 60 Query: 60 LQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 + L+ + A R RAL++ PTRELA Q+ + Y+K + ++ GGVS Q Sbjct: 61 IDKLMNGRAKA---RMPRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQE 117 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 KL GVDVL+ATPGRLLD + + + V+ LV+DEADRMLDMGFI DI R+ P Sbjct: 118 KKLDRGVDVLIATPGRLLDHFERGKLLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTPP 177 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFV---DKKRKRELL 236 K+Q L FSAT +I L ++ L +P+ IE +R T ++ +TQ + V D K KR L Sbjct: 178 KKQTLFFSATMPPEITRLTKQFLKDPVRIEASRPATTNENITQLMVKVPSSDPKAKRLAL 237 Query: 237 SHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 +I K + +VF K + +A+ L G +AAIHG+ Q RT+ LA F+ G + Sbjct: 238 RALIEKAQIETGIVFCNRKTEVDVVAKSLKSHGFDAAAIHGDLDQSQRTKTLAAFRDGSL 297 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 ++LVA+D+AARGLDI + HV NY++P+ +DYVHRIGRTGRA +G LV + K Sbjct: 298 KILVASDVAARGLDIPAVSHVFNYDVPHHADDYVHRIGRTGRAGRSGVTYMLVTPADDKG 357 Query: 357 LRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 + KL+ + + D S + G ++ GG R GG ++ R Sbjct: 358 FDKVVKLIGSTPTEEKL---DLDYSGAVTIKREGDKRGGGRDRAPRGGDRERGRDRDRNR 414 Query: 417 AKSA-------------SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 A + + PA + + PA R R+PR AA+ Sbjct: 415 APTEPSDVAAANLEAAITGVPATPVASTVMSDPPAKRPARVRKPRGEKAAE 465 >UniRef50_C0ZI64 Putative ATP-dependent RNA helicase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI64_BREBN Length = 493 Score = 550 bits (1418), Expect = e-155, Method: Composition-based stats. Identities = 162/452 (35%), Positives = 260/452 (57%), Gaps = 16/452 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF S G P++++ + + Y+EPT IQ++AIP ++EG+DL+ AQTGTGKTA F LP+L Sbjct: 4 SFASFGFRPELMQGIQDLYYKEPTQIQEEAIPLIMEGKDLIGQAQTGTGKTAAFMLPILN 63 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L +G+R ++ALILTPTREL+ QI + V K+LN+ L + GG I+ Q+ K Sbjct: 64 ALD------EGKRDIQALILTPTRELSIQIAKEVEKLGKHLNVNVLSLHGGTDIDKQLSK 117 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ V ++V TPGR+LD + ++ ++ LVLDEAD+M++MGF+ D+ +V+ P++R Sbjct: 118 LKETVQIVVGTPGRVLDHMKRGSLHFGRISTLVLDEADKMMEMGFLEDVEQVIVHTPSQR 177 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT D +K LA + + P I++ + +++ Q + V++ K + L ++ Sbjct: 178 QVLLFSATMPDLVKKLAHRFMKQPPHIKIEGKQKTVERIEQFYYVVNQSDKTDALVDVLE 237 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +VF T+ L +L ++G+ + A++G+ SQ R + + F+ + L+A Sbjct: 238 QEQPFLTIVFANTQVRVQQLTARLQENGLSAKALYGDLSQNKREQLMKQFREIRFQFLIA 297 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TDIAARGLD+E + HV+NY+LPN + Y+HR+GRTGRA G+A+SL+ + L+ Sbjct: 298 TDIAARGLDVEGVTHVINYDLPNDVDSYIHRVGRTGRAGQKGKAISLISPRQKNLMARFA 357 Query: 362 KLLKKEIPRIAI-PGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRR-----GEG 415 K K I + G D + R+ R Q Q++ + E Sbjct: 358 KATKASIEERILQEGRHLDAGRRQR--AEEREAHFIELRAQQAKEQQKEKDKEFSPVREA 415 Query: 416 GAKSASAKPA--EKPSRRLGDAKPAGEQQRRR 445 K KP +K +R LGD + E+ R++ Sbjct: 416 IKKKTKVKPGYKKKMARELGDLQTQYEKNRKK 447 >UniRef50_Q11039 Cold-shock DEAD box protein A homolog n=27 Tax=Bacteria RepID=DEAD_MYCTU Length = 563 Score = 550 bits (1418), Expect = e-155, Method: Composition-based stats. Identities = 156/398 (39%), Positives = 229/398 (57%), Gaps = 9/398 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L + P +LRA+ + GY PT IQ IPA++ G D++ AQTGTGKTA F +P+L Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMM 120 + + +AL+L PTRELA Q+ E Y YL+ + L ++GG S Q+ Sbjct: 74 KIDITS------KVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLA 127 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR G V+V TPGR++D + + L +V+ LVLDEAD ML MGF D+ R+L++ P Sbjct: 128 GLRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEY 187 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 +Q LFSAT I+ L+ K LH+P E+ + ++ ++Q V RK + L+ ++ Sbjct: 188 KQVALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQV--ARKMDALTRVL 245 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++ ++VF RTK +AE+L G +AAI G+ Q R R + + GDI +LV Sbjct: 246 EVEPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILV 305 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD+E + HV+NY++P+ E YVHRIGRTGRA +G AL V E LL+ I Sbjct: 306 ATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAI 365 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGG 398 EK ++ + +P E + + + GG Sbjct: 366 EKATRQTLTEAQLPTVEDVNTQRVAKFADSITNALGGP 403 >UniRef50_Q8D2Y1 DeaD protein n=2 Tax=Enterobacteriaceae RepID=Q8D2Y1_WIGBR Length = 583 Score = 550 bits (1418), Expect = e-155, Method: Composition-based stats. Identities = 145/378 (38%), Positives = 227/378 (60%), Gaps = 7/378 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF LGL IL A+ + GY++P+PIQ++ IP +L+G D++ AQTG+GKTA F LPLL Sbjct: 6 LSFSELGLKDFILLALNDLGYKKPSPIQEKCIPFLLKGYDVLGIAQTGSGKTAAFFLPLL 65 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 ++ + + +ILTPTRELA QI SKY+ I + ++GG + + Q+ Sbjct: 66 NNIDLKLKL------PQIIILTPTRELALQIKFACCSLSKYIKEINIIALYGGQNYSIQI 119 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ ++V TPGR+LDL ++ + L ++ VLDEAD ML MGFI D+ + K Sbjct: 120 KSLKRNPQIVVGTPGRILDLLNKKYLNLSEITSFVLDEADEMLRMGFIEDVENIFLKSSK 179 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 + Q +LFSAT I + ++ + P EI + + Q+ V K E L Sbjct: 180 QHQTILFSATMPAAIHRITKRFMKKPKEIRIKASENTRPNIKQNYWIVYGLCKIEALLRF 239 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + V++F RTK+ +++ L K+G S++++G+ +Q R + L FK+G + +L Sbjct: 240 LEVEIFDAVIIFVRTKNATLEVSDVLEKNGYNSSSLNGDMNQILREKTLNRFKTGLLDIL 299 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD++ + V+NY++P E Y+HRIGRTGRA TG+AL V E K+L + Sbjct: 300 VATDVAARGLDVDRISLVINYDIPLDVESYIHRIGRTGRAGRTGKALMFVENRERKILYN 359 Query: 360 IEKLLKKEIPRIAIPGYE 377 IE+ +K+++ +I +P E Sbjct: 360 IERNIKEKLSQIKLPSVE 377 >UniRef50_A2U4F0 DEAD/DEAH box helicase n=4 Tax=Flavobacteriales RepID=A2U4F0_9FLAO Length = 411 Score = 550 bits (1418), Expect = e-155, Method: Composition-based stats. Identities = 170/372 (45%), Positives = 251/372 (67%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F + L+ I +A+AE + +PT +Q++ IP VL+ ++++ +AQTGTGKTA F LP++ Sbjct: 1 MQFSDIPLNKSIQKAIAEARFHKPTLVQEKTIPLVLDKKNVIVAAQTGTGKTAAFALPII 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L +Q KG + ++AL++TPTRELA QI EN + YSKY N+RS VFGGVS+ PQ Sbjct: 61 NLLFDKQDAEKGEKKIKALVITPTRELAIQILENFKSYSKYSNLRSTAVFGGVSLEPQKE 120 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GVD+LVATPGRL+DL+ Q + L Q+EI VLDEAD MLDMGFI+DI+++ P K Sbjct: 121 ILAKGVDILVATPGRLIDLQMQGNIDLSQLEIFVLDEADLMLDMGFINDIKKIEKLCPRK 180 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 +Q LLFSAT + I L++ ++ N ++++ T + + Q ++++ KK K +L H++ Sbjct: 181 KQTLLFSATIPEKIDELSKSIVKNATKVDINPEETTAKNIGQLLYYLPKKNKTDLCLHLL 240 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++++F RTK + L + L K+G A+IHG+K+QG R +A+ DFKS +L+ Sbjct: 241 RNTINGKIIIFRRTKFAVDKLEQTLIKNGYNVASIHGDKTQGVRNKAIEDFKSKKASILI 300 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+DI + ++N+++PNVPE YVHRIGRTGRA +G A S DE+ + I Sbjct: 301 ATDVAARGIDITNVDAIINFDIPNVPEIYVHRIGRTGRAGKSGIAFSFCSPDENNYIASI 360 Query: 361 EKLLKKEIPRIA 372 E L++K I I Sbjct: 361 ENLIEKSIKVIE 372 >UniRef50_Q9VHP0 ATP-dependent RNA helicase bel n=13 Tax=Eukaryota RepID=DDX3_DROME Length = 798 Score = 549 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 158/391 (40%), Positives = 229/391 (58%), Gaps = 23/391 (5%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SFD + L+ I VA Y +PTP+Q+ AIP ++ GRDLMA AQTG+GKTA F +P+L Sbjct: 296 SFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILN 355 Query: 62 HLI---------TRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGG 112 + + + +++ ++ L+L PTRELA QI E + ++ +R V++GG Sbjct: 356 QMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGG 415 Query: 113 VSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRR 172 + + QM +L G ++VATPGRL D+ + V L+ + LVLDEADRMLDMGF IRR Sbjct: 416 NNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRR 475 Query: 173 VLTK--LPA--KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVD 228 ++ + +P +RQ L+FSATF I+ LA L N + + V R + S+ +TQ + +V Sbjct: 476 IVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQTILWVY 535 Query: 229 KKRKRELLSHMIGK-------GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281 + KR L ++ L+F TK GA+ L E L + +IHG+++Q Sbjct: 536 EPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQ 595 Query: 282 GARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAA 341 R AL F+SGD +LVAT +AARGLDI + HV+N++LP+ E+YVHRIGRTGR Sbjct: 596 KEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 655 Query: 342 TGEALSLVCVDEHKLLRDIEKLL---KKEIP 369 G A S + D+ +LL K+EIP Sbjct: 656 LGVATSFFNEKNRNICSDLLELLIETKQEIP 686 >UniRef50_C5PZD1 ATP-dependent RNA helicase n=5 Tax=Bacillales RepID=C5PZD1_STAAU Length = 517 Score = 549 bits (1416), Expect = e-155, Method: Composition-based stats. Identities = 153/466 (32%), Positives = 252/466 (54%), Gaps = 24/466 (5%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LG+S + ++++ G++EPTPIQ+ +IP L+G D++ AQTGTGKT F +PL++ Sbjct: 14 NFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIE 73 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 ++ G++ V++LIL PTRELA Q+ E +R++S+ ++ + VFGG+ I Q+ Sbjct: 74 KVV-------GKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKA 126 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA-K 180 L+ G ++V TPGR++D ++ +K D + L+LDEAD M++MGFI D+R ++ K+PA + Sbjct: 127 LKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQ 186 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT I+AL ++ + +P I+ + Q+ + V + K + ++ + Sbjct: 187 RQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFL 246 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +VF RTK + L L G ++ +HG+ +Q R L FK+ I +LV Sbjct: 247 DVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILV 306 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI + HV N+++P E Y HRIGRTGRA G A++ V E +R I Sbjct: 307 ATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQI 366 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQ----------- 409 E +++ + P + + + I+ + R + Sbjct: 367 EDANGRKMSALRPPHRKEVLQAREDDIKEKVENWMSKKSESRLKRISTELLNEYNDVDLV 426 Query: 410 ----PRRGEGGAKSASAKPAEKP-SRRLGDAKPAGEQQRRRRPRKP 450 E + EKP SR+ + KP+G + R + P Sbjct: 427 AALLQELVEANDEVEVQLTFEKPLSRKGRNGKPSGSRNRNSKRGNP 472 >UniRef50_A9ENG9 ATP-independent RNA helicase n=18 Tax=Bacteria RepID=A9ENG9_SORC5 Length = 624 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 181/473 (38%), Positives = 254/473 (53%), Gaps = 30/473 (6%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF +LG++P +L +AE GY EPTPIQ++AIP +L GRDL+ A TGTGKTA F LPLLQ Sbjct: 9 SFAALGIAPALLGVLAELGYEEPTPIQREAIPHLLTGRDLLGQAATGTGKTAAFALPLLQ 68 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L + + R AL+L PTRELA Q+ E + Y + L ++ L V+GG Q+ Sbjct: 69 RL---EIGGEPPRLPEALVLVPTRELAMQVAEAMHRYGRRLGVQVLSVYGGQPFGQQLRA 125 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GV V+VATPGR LD + + LD + +VLDEAD MLDMGF + +L+ P R Sbjct: 126 LRRGVHVVVATPGRTLDHIGRGTLALDGIRTVVLDEADEMLDMGFAEALEEILSATPGAR 185 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTAS---DQVTQHVHFVDKKRKRELLSH 238 Q +LFSAT I A+A + L P+ +++A A +V Q + V + K L+ Sbjct: 186 QTVLFSATLPPRIAAIAGRHLREPVRVKIAGEKAAPGELPRVRQTAYIVPRAHKSAALTR 245 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + ++F RT++ + L E L G + A+HG SQ R R +A F++G + Sbjct: 246 VLDMEDPSSAILFCRTRNEVDELTEALRARGYEAQALHGGFSQEHRDRVMARFRAGTAEL 305 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLDIE + HV+NY++P PE YVHRIGRTGRA G A++LV EH L+R Sbjct: 306 LVATDVAARGLDIEHVSHVINYDVPCAPEVYVHRIGRTGRAGREGAAITLVEPREHYLIR 365 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQ---RGGGGRGQG------------- 402 ++E+L + I +P + + E + ++ GG R + Sbjct: 366 NVERLTGQRIEAATLPTVADLRARRLELTRASLREALIEGGAERFRVVVEGLADEFDVMD 425 Query: 403 --------GGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRP 447 + R E + P P R D P G R RP Sbjct: 426 IAAAAVKLAHDATEGDREEEEAEIPSFRPPPRGPERARDDRAPRGPAGARGRP 478 >UniRef50_B9SAJ6 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAJ6_RICCO Length = 956 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 158/457 (34%), Positives = 246/457 (53%), Gaps = 38/457 (8%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F++ G P+IL + + G+ PTPIQ Q P L RD++A A+TG+GKT G+ +P Sbjct: 488 ITFEASGFPPEILNDIRDAGFLAPTPIQAQTWPIALRNRDIVAIAKTGSGKTLGYLIPAF 547 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 ++ RQ + L+L PTRELA QI + V + + + ++GG PQ+ Sbjct: 548 --ILLRQCRNNPQNGPTVLVLAPTRELATQIQDEVIKFGRSSRVSCTCLYGGAPKGPQLK 605 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L G D++VATPGRL D+ + QV +LVLDEADRMLDMGF IR+++ ++P + Sbjct: 606 ELTRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPR 665 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN--TASDQVTQHVHFVDKKRKRELLSH 238 RQ L+++AT+ +++ +A LL NP+++ + + A+ +TQ+V V + K L Sbjct: 666 RQTLMYTATWPKEVRKIANDLLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKESRLGQ 725 Query: 239 MIG-KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++ + +V++F TK + LA + +AAIHG+KSQG R L F+SG Sbjct: 726 ILRAQERGSKVIIFCSTKRLCDQLARSIGHQ-FGAAAIHGDKSQGERDWVLNQFRSGKSP 784 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGE-------ALSL-- 348 +LVATD+AARGLDI+++ V+NY+ P EDYVHRIGRTGRA ATG A ++ Sbjct: 785 ILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVNVAAHMIATTIWM 844 Query: 349 ---VCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGR 405 V V+E L+ + + L + I +A+ + R + R Sbjct: 845 VVDVDVEEEGLMVEEKLLTEVGIEVLAV-------------VLKDRSRSRSYDRF----- 886 Query: 406 GQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQ 442 ++PR K +A +E P + P Sbjct: 887 --ERPRVSRFDEKDVTAPGSEAPESGMSPMSPGAHGN 921 >UniRef50_A0KXT6 DEAD/DEAH box helicase domain protein n=61 Tax=Gammaproteobacteria RepID=A0KXT6_SHESA Length = 491 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 205/468 (43%), Positives = 277/468 (59%), Gaps = 17/468 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F LGL +++AV E GY PTPIQ +AIP++L G++++A+AQTGTGKTA F LPLL Sbjct: 1 MPFSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 R VRA+ILTPTRELA Q+ EN+ Y+KYL + ++ ++GGV PQ Sbjct: 61 HRFADAPKIRPKR--VRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKK 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L GVD+LVATPGRLLD+ Q A++ D+V +LVLDEADRMLDMGFI DI ++ KLP + Sbjct: 119 RLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPEQ 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSAT S +KALA+ + + +EIE++R++ AS + Q + VDK +K LLSH+I Sbjct: 179 RQNLLFSATLSKQVKALAKSAIPDAIEIEISRKSAASTHIDQWLTTVDKDKKSALLSHLI 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + NW Q L+F +TKHGA L QL K GI + A H +SQ R + L DFK+G + LV Sbjct: 239 QEQNWSQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAVREQLLIDFKAGKVSFLV 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 AT +A+RG+DI+ L V+NY+LP+ +DY+HRIGRTGRA GEA+S V D+ + L I Sbjct: 299 ATGVASRGIDIDALARVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLCAI 358 Query: 361 EKLLKKEIPRIAIPGYEPD-------PSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRG 413 E+ L I R I G+EP + ++ R + G Sbjct: 359 ERRLGHVIVRREIAGFEPKKVVPISILDFVPKSASKTERKPNSPAETNLQSRPYSSGKPG 418 Query: 414 EGGAKSASAKPAEKPSRRLGDAKPA--------GEQQRRRRPRKPAAA 453 A A + K + K + RP P Sbjct: 419 TFEATQAKKHRSAKAAPAPKAQKTGTDSRSDTHSGARSNSRPANPLQG 466 >UniRef50_B4N414 GK13754 n=2 Tax=Bilateria RepID=B4N414_DROWI Length = 839 Score = 548 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 149/417 (35%), Positives = 223/417 (53%), Gaps = 5/417 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF G +++AV + Y +PT IQ QA+P L GRD++ A+TG+GKTA F PLL Sbjct: 302 SFGHFGFDDQLIKAVRKAEYTQPTSIQAQAVPCALAGRDIIGIAKTGSGKTAAFIWPLLM 361 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 HL+ ++ G P+ LIL PTREL+ QI + + K N+R + +GG S Q Sbjct: 362 HLMDQRELKAGEGPI-GLILAPTRELSLQIYNEAKRFGKVYNLRVVCCYGGGSKWEQSKA 420 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L G +++VATPGR++D+ A L +V LVLDEADRM MGF +R + + R Sbjct: 421 LEQGAEIIVATPGRMIDMVKMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICQHVRPDR 480 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFV--DKKRKRELLSHM 239 Q LLFSATF I+ LA +L +P+ I N A+ VTQ V+ + +++ LL H+ Sbjct: 481 QTLLFSATFKRRIERLARDVLTDPIRIVQGELNEANQDVTQAVYVLPNPQQKWNWLLCHL 540 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + L+F K A +A QL +HG+ Q R + + FK + +L Sbjct: 541 VKFLAEGSCLIFVTKKADAETVAHQLLVKEFNCLLLHGDMDQADRNKVIMQFKRKECDIL 600 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 +ATD+AARGLDI + +VVNY++ + + HRIGRTGRA G A +LV + + Sbjct: 601 IATDVAARGLDIPHIRNVVNYDIARDIDTHTHRIGRTGRAGEKGNAHTLVTEKDKEFAGH 660 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 + + L+ +P + ++K+ ++ R ++G G + G RG G Sbjct: 661 LVRNLEGA--DQPVPSDLLELAMKSSWFRSSRFKQGKGKKVTPTHVGLGYRERGGGN 715 >UniRef50_Q3AFI3 ATP-dependent RNA helicase, DEAD box family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFI3_CARHZ Length = 430 Score = 548 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 159/388 (40%), Positives = 234/388 (60%), Gaps = 7/388 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LGL +L+AV + G+ PTPIQ++AIP +LEG +L+ A TGTGKTA + LP+LQ Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + + + + LI+TPTRELA Q+ + V KYL +R+L V+GG +I Q+ L Sbjct: 64 I-------QRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGL 116 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 R GV+V+V TPGR+LD + +++I++LDEAD MLDMGFI DI +L L ++Q Sbjct: 117 RQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQ 176 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 LLFSAT IK + +K L +++ R + Q + + + K E L ++ Sbjct: 177 TLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGLVSILNS 236 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 Q +VF RTK + + EQLN G + +HG+ SQ RT+ + FK+G +LVAT Sbjct: 237 ELPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVAT 296 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARGLDI ++ HV+N+++P PE Y+HRIGRTGRA G+A++L+ E KLL+ IE+ Sbjct: 297 DVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEE 356 Query: 363 LLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 + K + R +P + + I Sbjct: 357 AINKRLKREILPEPVDLEEARFKKIAKK 384 >UniRef50_C4QME8 DEAD box ATP-dependent RNA helicase, putative n=7 Tax=Fungi/Metazoa group RepID=C4QME8_SCHMA Length = 1544 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 145/406 (35%), Positives = 228/406 (56%), Gaps = 6/406 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 ++ G+S +L + + +PTPIQ QA+P ++ GRD++ A+TG+GKT F +PL++ Sbjct: 851 NWVQAGISSRLLACLKRNNFDKPTPIQCQALPVIMSGRDMIGIAKTGSGKTLAFLVPLMR 910 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 HL + P G P+ AL+L PTRELA QI + + + + R++ V+GG I+ Q+ + Sbjct: 911 HLEHQAPLNPGDGPI-ALLLAPTRELALQIFKETKKLCQAADARAVCVYGGTGISEQIAE 969 Query: 122 LRGGVDVLVATPGRLLDLEHQ---NAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ G +++V TPGR++D+ L + +VLDEADRM D+GF + R++ Sbjct: 970 LKRGAEIIVCTPGRMIDMLAANGGRVTNLHRCSYVVLDEADRMFDLGFEPQVMRIIENCR 1029 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ L+FSATF ++ LA K+L P+EI++ R+ V QH + ++ K + Sbjct: 1030 PDRQTLMFSATFPRQMEILARKVLTLPIEIQIGGRSVVCSDVEQHAFILSEEEKVYKVLE 1089 Query: 239 MIGKGNWQ-QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++G + VLVF + A+ L L K G ++HG Q R + DFK G+IR Sbjct: 1090 LLGIYQEEGSVLVFVEKQESADELMRVLLKYGYPCLSLHGGIDQYDRDSVIMDFKRGNIR 1149 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +L+AT +AARGLD+ +L V+NY+ PN EDYVHR GRTGRA G A + + D+ + Sbjct: 1150 LLIATSVAARGLDVTDLLLVINYDCPNHYEDYVHRCGRTGRAGRKGFAYTFLTPDQERSA 1209 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGG-RGQG 402 D+ + K+ + + K G++ G G RG+G Sbjct: 1210 GDVVRAFKQSGQKPPEELMNMWNAYKIRMEHEGKKVYGSSGFRGKG 1255 >UniRef50_C0EAN9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAN9_9CLOT Length = 563 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 141/445 (31%), Positives = 238/445 (53%), Gaps = 6/445 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L LS + +A+ G+ T IQ Q+IP + G D++ +QTGTGKT F +P ++ Sbjct: 6 FAQLNLSDETGQAIEAMGFDNATDIQAQSIPLIRAGYDVIGRSQTGTGKTVAFGVPAVEL 65 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMK 121 + T + R + LIL PTRELA Q + +KY +R++ ++GG ++ Q+M+ Sbjct: 66 IDTEEL----RNKTQVLILCPTRELAVQACSEIEKIAKYKRGVRAVDIYGGAPMDRQIMR 121 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G +++V TPGR++D + +KLD +++++LDEAD ML+MGF D+ +L + P +R Sbjct: 122 LKRGANIVVGTPGRVMDHLRRRTLKLDHLKMIILDEADEMLNMGFREDVETILKQTPDER 181 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q +LFSAT I AL ++ +P IE+ R+ D + Q + V RK + L ++ Sbjct: 182 QTILFSATMPPAILALTKQYQKDPQLIEINRKQVTLDNIEQQFYEVPMGRKMDALGIILQ 241 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + ++F TK + + L++ G + +HG+ Q RT+ + FK G ++LVA Sbjct: 242 YHDPALSIIFCNTKRMVDEVTAFLDRSGYSAEGLHGDMKQSQRTKVMDSFKRGRTKILVA 301 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC-VDEHKLLRDI 360 TD+AARG+D+ + +V+NY++P E YVHRIGRTGRA G+A+++ + L I Sbjct: 302 TDVAARGIDVNNVDYVINYDVPQNQEYYVHRIGRTGRAGKEGKAVTICSGRRQVDELYHI 361 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 ++ K I R ++P + E + +Q+ ++ + + Sbjct: 362 VRMTKSTIKRESLPSGQDIERRSNEGVVARMEQKLAAAEELYYKEVAEELVQKGYNPTTI 421 Query: 421 SAKPAEKPSRRLGDAKPAGEQQRRR 445 +A E R P +Q R + Sbjct: 422 AAVALEMAFGRPKTDFPEIKQFRPK 446 >UniRef50_P42305 ATP-dependent RNA helicase dbpA n=99 Tax=Firmicutes RepID=DBPA_BACSU Length = 479 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 160/421 (38%), Positives = 228/421 (54%), Gaps = 7/421 (1%) Query: 1 MS-FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPL 59 MS F + +S DILRA+ GY EPT +QQ IPA LE +DL+ +QTG+GKTA F +PL Sbjct: 1 MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPL 60 Query: 60 LQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 + + +ALILTPTRELA Q+ E++ + ++ I++ VFG S + Q Sbjct: 61 CELANWDE------NKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQK 114 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 +L+ ++V TPGR+LD + + LD++ LV+DEAD ML+MGFI + ++ LP Sbjct: 115 AELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPT 174 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +R +LFSAT DI+ L+ + + NP IEV + + V V ++ K LL + Sbjct: 175 ERTTMLFSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAVIQVREENKFSLLKDV 234 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + N ++F RTK N L ++L+ G IHG Q R + +FK G+ R L Sbjct: 235 LMTENPDSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYL 294 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+DIE + V+NY+LP E YVHR GRTGRA G+A+S V E + L D Sbjct: 295 VATDVAARGIDIENISLVINYDLPLEKESYVHRTGRTGRAGNKGKAISFVTAFEKRFLAD 354 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKS 419 IE+ + EI +I P E K E + + GG K Sbjct: 355 IEEYIGFEIQKIEAPSQEEVARKKPEFLAKLNDRPESKKDKSEELNKDIMKLYFNGGKKK 414 Query: 420 A 420 Sbjct: 415 K 415 >UniRef50_Q30PP0 DEAD/DEAH box helicase-like protein n=11 Tax=Bacteria RepID=Q30PP0_SULDN Length = 540 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 151/375 (40%), Positives = 227/375 (60%), Gaps = 7/375 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++FD LGL +ILR+V + G+ P+PIQ AIP +L GRD++ A TGTGKTA F LP L Sbjct: 14 ITFDDLGLKKEILRSVKDAGFTVPSPIQAAAIPFILAGRDIVGQAHTGTGKTAAFGLPAL 73 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 ++ V L++TPTRELA Q+ + + Y + + R++ V+GG S N Q+ Sbjct: 74 NNINPND-------GVGILVITPTRELATQVSDELFKYGRNIGARTVTVYGGSSYNRQID 126 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 ++ G V+VATPGRLLD+ +N +K I+VLDEAD MLDMGF+ DI + + LP+ Sbjct: 127 LIQRGASVVVATPGRLLDILKKNLLKDFAPSIVVLDEADEMLDMGFLDDINEIFSYLPSN 186 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT IK LAE++L NP I + + T + + Q + +++ + + + ++ Sbjct: 187 RQTLLFSATMPKPIKLLAERILDNPEFISITKGETTNTDINQEYYVIEESERDDAIIRLM 246 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 Q+ +VF RTK + L+ L+ G + +HG+ Q R + FK+ ++VLV Sbjct: 247 DAEACQKSIVFCRTKSEVDRLSNVLSSAGYLANGLHGDMEQRQRETVIKGFKNNGVKVLV 306 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+ ++ + HV NY +P PE YVHRIGRTGRA G+A++L+ E K L+ I Sbjct: 307 ATDVAARGIHVDNISHVFNYHIPFDPESYVHRIGRTGRAGTKGKAITLLTPLEFKELQRI 366 Query: 361 EKLLKKEIPRIAIPG 375 + + + +P Sbjct: 367 KTKVGTTMTHAFVPS 381 >UniRef50_A6KZW9 ATP-dependent RNA helicase n=51 Tax=Bacteria RepID=A6KZW9_BACV8 Length = 624 Score = 547 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 156/376 (41%), Positives = 233/376 (61%), Gaps = 8/376 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVL-EGRDLMASAQTGTGKTAGFTLPLL 60 +F+ LG+SP+IL+A+ E GY P P+Q++ IP +L G D++A AQTGTGKTA F LPL+ Sbjct: 3 TFEELGVSPEILKAIKEMGYENPMPVQEEVIPYLLGNGNDVVALAQTGTGKTAAFGLPLI 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 Q + + R +ALIL PTREL QI ++ DYSKY+ ++ L V+GG SI Q+ Sbjct: 63 QKVDVK------HRAPQALILCPTRELCLQIAGDLNDYSKYIDGLKILPVYGGSSIESQI 116 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ GV ++VATPGRL+DL + KL+ + +V+DEAD ML+MGF I +L K+P Sbjct: 117 RMLKTGVHIIVATPGRLIDLIERKVAKLETITDVVMDEADEMLNMGFTDSINAILEKVPE 176 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 R L+FSAT S +I +A+K LH+ EI + +N S V + V K K L + Sbjct: 177 DRNTLMFSATMSPEISRIAKKYLHDAKEITIGTKNEGSKNVNHIAYLVHAKDKYAALKRI 236 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 ++F RT+ +A++L +DG + ++HG SQ R + F+ +++L Sbjct: 237 ADYYPQIYGIIFCRTRKETQEIADKLIQDGYNADSLHGELSQAQRDLVMQKFRQRHLQLL 296 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD+ +L HV+NY LP+ E Y HR GRTGRA TG +++++ + E +R+ Sbjct: 297 VATDVAARGLDVNDLTHVINYGLPDDIESYTHRSGRTGRAGKTGISIAIINLREKGKMRE 356 Query: 360 IEKLLKKEIPRIAIPG 375 IE+++ K+ +P Sbjct: 357 IERIINKKFIMGEMPS 372 >UniRef50_C5KR89 RNA helicase, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5KR89_9ALVE Length = 584 Score = 547 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 147/373 (39%), Positives = 216/373 (57%), Gaps = 10/373 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ +++ + GY EPT IQ+ P L GRD++ AQTG+GKT F LP + Sbjct: 175 TFEQGQFPEVLMKEFEKAGYTEPTNIQKIGWPVALSGRDMVGVAQTGSGKTVAFMLPAII 234 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + P G PV L+L PTRELA Q+ + K + + +FGGV Q Sbjct: 235 HVNAQAPLKHGDGPV-VLVLVPTRELAMQVQAEATRFGKMAGLMNTAIFGGVPRYNQAND 293 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GV++ +ATPGRLLD L +V LVLDEADRMLDMGF IRR+++++ R Sbjct: 294 LRRGVEICIATPGRLLDFLETGVTNLKRVTYLVLDEADRMLDMGFEPQIRRIVSQIRPDR 353 Query: 182 QNLLFSATFSDDIKALAEKLLH-NPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 Q ++SAT+ +++++A P+ + V A+ V Q V V + KR++ Sbjct: 354 QTTMWSATWPKEVQSMARDFCREEPIRLTVGNTQLQANPDVKQRVEVVSEMDKRQMFFDW 413 Query: 240 IGKGNWQ--QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + + + +++VFT TK GA+ L ++ + +A+IHG+K Q R R L DFK+G Sbjct: 414 LKETYPKGSRIIVFTETKKGADALTREMRYNNFNAASIHGDKEQRERDRILNDFKTGRCN 473 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLV-----CVD 352 VLVATD+A RGLDI+ + VVNY++P EDYVHRIGRTGRA A G +L+ + D Sbjct: 474 VLVATDVAQRGLDIKNVEWVVNYDMPKTVEDYVHRIGRTGRAGAVGNSLTFITNDTHTPD 533 Query: 353 EHKLLRDIEKLLK 365 ++ +DI K ++ Sbjct: 534 RVRMAKDIVKCME 546 >UniRef50_A9BJS7 DEAD/DEAH box helicase domain protein n=2 Tax=cellular organisms RepID=A9BJS7_PETMO Length = 530 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 153/394 (38%), Positives = 233/394 (59%), Gaps = 11/394 (2%) Query: 1 MS-FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRD-LMASAQTGTGKTAGFTLP 58 M+ F +GLS +IL A+ +GY PTPIQ++ IP +L G++ ++ AQTGTGKTA F +P Sbjct: 1 MTKFQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIP 60 Query: 59 LLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 L++ L + V+AL+LTPTRELA Q+ + + L V+GGVSI Q Sbjct: 61 LIERLDEKAND------VQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQ 114 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 + L+ VD++V TPGR++D ++ + + +++ LV+DEAD MLDMGFI D+ +L+K Sbjct: 115 IRALKRRVDLVVGTPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIEDVEMILSKTN 174 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEV---ARRNTASDQVTQHVHFVDKKRKREL 235 ++Q L+FSAT I LA K + N + + + + Q + + + K EL Sbjct: 175 KEKQILMFSATMPQRIVTLARKHMGNFETVTTVQENKEDITVKKAKQIYYMISESNKIEL 234 Query: 236 LSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295 LS +I LVFT+TK + +A +L K G + A++G+ SQ R R + FKS Sbjct: 235 LSRLIDIDTNFYGLVFTKTKVQSEEIANELIKKGYEAEALNGDVSQNQRERIMDRFKSKR 294 Query: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK 355 I++L++TD+AARG+DI+ L +V+NY LP PE+Y+HRIGRT RA G A++ V E++ Sbjct: 295 IKILISTDVAARGIDIDNLKYVINYSLPQNPENYIHRIGRTARAGNEGTAITFVTPTEYR 354 Query: 356 LLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQN 389 I+ K I IP + + K E I++ Sbjct: 355 RFMFIKHSSKAIIEEAKIPQAKDIVNAKVEKIKD 388 >UniRef50_A9NFC3 DEAD box ATP-dependent RNA helicase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFC3_ACHLI Length = 547 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 145/389 (37%), Positives = 218/389 (56%), Gaps = 7/389 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F+ L + A+ + G+ E TPIQ+QAIP ++ G DL+ AQTGTGKT F +P+++ Sbjct: 5 FNDLPILDTTKVALEKLGFTEATPIQEQAIPKMILGLDLIGQAQTGTGKTFAFGIPMVEK 64 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMMK 121 T R + LILTPTREL Q+ + + K+ +R + GG S Q + Sbjct: 65 TDT------SLRQTQGLILTPTRELTNQVYKEIIKLVKFYPELRVTTIVGGESYEKQFKE 118 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L ++VATPGR++D + V L + L LDEAD ML MGF DI R+L P R Sbjct: 119 LDRKPHIIVATPGRIIDHIDRGTVDLSHITTLTLDEADEMLKMGFQDDIERILQTTPETR 178 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q +LFSAT IK +A+ NP I++ ++ D++TQ V +K K+ LL ++ Sbjct: 179 QTVLFSATMPAFIKKIAKNYQKNPELIKIEAKSLTVDRITQAYFLVKEKEKQSLLERLLD 238 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 N ++F TK GA+ + E L K G + A+HG+ Q RT + F+S + +LVA Sbjct: 239 FENPSTAIIFVNTKAGADRITESLQKAGFTADALHGDLKQSQRTYVMNRFRSKQLSILVA 298 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD++++ +VNY+LP E YVHRIGRTGRA G+A + V + ++L + Sbjct: 299 TDVAARGLDVDDVEIIVNYDLPQQDEIYVHRIGRTGRAGKKGKAFTFVTPLKRRMLDMLA 358 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 K +I R+ +P + + + ++ Sbjct: 359 HYTKADIKRLEVPTADDVYKEQLKTFKHK 387 >UniRef50_B8I5B1 DEAD/DEAH box helicase domain protein n=2 Tax=Clostridium RepID=B8I5B1_CLOCE Length = 542 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 153/454 (33%), Positives = 237/454 (52%), Gaps = 13/454 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ LG+S IL+A+ + G++ PT +Q +AIP +L DL+ ++TG+GKTA F + +LQ Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQ 63 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + LILTP RELA Q+ ++R +KYL ++ ++G +IN + Sbjct: 64 ------LTNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKHKTTAIYGQHNINLETQI 117 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GV ++ TPGR+ D + + LVLDEADRMLDMGF+ + R++ LP +R Sbjct: 118 LNKGVSIVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLDMGFLDQVVRIVKTLPKER 177 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 LLFSAT +I + ++ ++NP+ IE+ + D + Q + V+ K L+ ++ Sbjct: 178 ITLLFSATMPPEIHNICKRYMNNPVTIEIESQTKTVDTIHQVYYRVNYNEKNTQLNRLLI 237 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + ++F TK + + L K G S A+HG+ Q R + FK G +LVA Sbjct: 238 VEKPESCMIFCNTKAAVDRVQSFLGKKGYSSRALHGDIPQSKRLNTIQQFKQGKFHILVA 297 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARG+ IE+L V+NY++PN ++YVHRIGRTGRA G A SLV D+ L +IE Sbjct: 298 TDVAARGIHIEDLSLVINYDVPNDKDNYVHRIGRTGRAGHEGRAFSLVTGDDIISLYEIE 357 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQ--NGRQQRGGGGRGQGGGRGQQQPRRGEGGAKS 419 + + I +P E + E Q + R +Q R G+ + Sbjct: 358 EHIGTLILEEELPDEEAFTKAREEAAQWIKANSLKEKAPRSASADSSVKQKRTGQNSKSN 417 Query: 420 ASAKPAEKPSRRL-----GDAKPAGEQQRRRRPR 448 + S+R K A +QR R + Sbjct: 418 RIPNGRPEYSKRPDGQSRHTGKSASSEQRSERIK 451 >UniRef50_B8A609 Novel protein similar to vertebrate DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 (DDX43) n=2 Tax=Eumetazoa RepID=B8A609_DANRE Length = 719 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 148/402 (36%), Positives = 229/402 (56%), Gaps = 8/402 (1%) Query: 2 SFDS-LGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +F+ P I+ + G+++PTPIQ QA P VL G DL+ AQTGTGKT + LP Sbjct: 278 TFEEAFAHYPGIMENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLAYLLPGF 337 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + R L+LTPTRELA QI YS Y +S+ ++GG N Q+ Sbjct: 338 IHMDGQPMPRDKRNGPGMLVLTPTRELALQIEAECNKYS-YKGFKSICIYGGGDRNAQIK 396 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 + GVD+++ATPGRL DL+ + L + LVLDEADRMLDMGF I +++ + Sbjct: 397 VVTSGVDIVIATPGRLNDLQMNELINLRSITYLVLDEADRMLDMGFEPQIMKIILDIRPD 456 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 RQ ++ SAT+ ++ LA+ L +P+ + V + A + V Q V FV + K++ + Sbjct: 457 RQTVMTSATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNTVQQTVLFVQEDEKKDYVFDF 516 Query: 240 IGKGNW-QQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 I + +VL+F K A+ L+ L GI ++HG++ Q R AL DFK G +R+ Sbjct: 517 IHRMEPLDKVLIFVGKKLKADDLSSDLCLQGIAVQSLHGDREQCDREEALQDFKDGRVRI 576 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+A+RGLD+ ++ HV NY+ P E+YVHR+GRTGRA +GE+++LV ++ ++ Sbjct: 577 LVATDLASRGLDVHDITHVFNYDFPRNVEEYVHRVGRTGRAGRSGESVTLVTREDWRVAA 636 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRG 400 ++ +L++ + E + ++ R++ G R Sbjct: 637 ELITILERSGQDVP----EELVLMAERYEKHRREKEMFGPRS 674 >UniRef50_Q9P7C7 Pre-mRNA-processing ATP-dependent RNA helicase prp11 n=1 Tax=Schizosaccharomyces pombe RepID=PRP11_SCHPO Length = 1014 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 168/457 (36%), Positives = 251/457 (54%), Gaps = 21/457 (4%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 S+ GLS + + GY +PT IQ QAIPA+ GRD++ A+TG+GKT F LP+ + Sbjct: 419 SWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFR 478 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ ++P G P+ A+I+TPTRELA QI + + K LNIR+ +GG I Q+ Sbjct: 479 HIKDQRPLKTGEGPI-AIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIAD 537 Query: 122 LRGGVDVLVATPGRLLDLEHQNA---VKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ G +++V TPGR++D+ NA L + LVLDEADRM D+GF + R++ + Sbjct: 538 LKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIR 597 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ +LFSATF ++ALA K+L P+EI V R+ + +V Q V ++ K L Sbjct: 598 PDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASEVEQIVEVRPEESKFSRLLE 657 Query: 239 MIGKGNWQ----QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSG 294 ++G+ + LVF + A+ L L K G S +IHG K Q R ++D+K+G Sbjct: 658 LLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAG 717 Query: 295 DIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEH 354 VL+AT + ARGLD++ L VVNY+ PN EDYVHR+GRTGRA TG A++ + ++ Sbjct: 718 VFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQE 777 Query: 355 KLLRDIEKLLKKEIPRIAIP-GYEPDPSIKAEPIQNGRQQRGGG----------GRGQGG 403 K DI K LK + + +P + S E ++ G+++ GG + Sbjct: 778 KYAVDIAKALK--MSKQPVPKELQTLASQFLEKVKAGKEKAAGGGFGGKGLSRLDETRNA 835 Query: 404 GRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGE 440 R Q+ GE + A+ P ++ K G+ Sbjct: 836 ERKMQRKAYGEDEEDVETEAEAKSPLEKITPEKSTGD 872 >UniRef50_UPI00015B57D6 PREDICTED: similar to DEAD box ATP-dependent RNA helicase n=1 Tax=Nasonia vitripennis RepID=UPI00015B57D6 Length = 715 Score = 546 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 154/396 (38%), Positives = 231/396 (58%), Gaps = 6/396 (1%) Query: 10 PDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPH 69 PDIL + +Q + +P+PIQ QA P +L G+D++ AQTGTGKT F LP L H+ + Sbjct: 283 PDILVEIRKQNFEKPSPIQCQAWPILLSGKDMIGIAQTGTGKTLAFLLPALIHIDNQDTP 342 Query: 70 AKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVL 129 R L++ PTRELA QI + V Y Y I+++ V+GG QM + GV+++ Sbjct: 343 RSERSGPTVLVMAPTRELALQIEKEVNKY-YYHGIKAVCVYGGGDRKKQMNIVSKGVEIV 401 Query: 130 VATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSAT 189 +ATPGRL DL + + V LVLDEADRMLDMGF IR+ L + RQ ++ SAT Sbjct: 402 IATPGRLNDLIQTEVLDVKCVSYLVLDEADRMLDMGFEPQIRKSLLDIRPDRQTVMTSAT 461 Query: 190 FSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMIGKGNW-QQ 247 + ++ LAE + +P+ + V + A VTQ + VD++ K ++L + Sbjct: 462 WPPGVRRLAESYMKSPITVCVGSLDLKAVHSVTQKIWIVDEEEKTDVLKDFFHNMAPSDK 521 Query: 248 VLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAAR 307 V+VF K + + L G+ +IHG + Q R +AL D K+GD+ +L+ATD+A+R Sbjct: 522 VIVFFGKKCKVDDIGSDLALSGVACQSIHGGREQADREQALEDIKTGDVNILLATDVASR 581 Query: 308 GLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKE 367 G+DIE++ HV NY+ P E+YVHR+GRTGRA TGE++SLV + L +++ K+L++ Sbjct: 582 GIDIEDITHVFNYDFPRDIEEYVHRVGRTGRAGKTGESISLVTRRDWGLTKELIKILEEA 641 Query: 368 IPRIAIPGYEPDPSIKAEPIQNGR-QQRGGGGRGQG 402 IP S + E ++ R ++RG G R + Sbjct: 642 --EQEIPTELYSMSERYEAMKKKRDEERGDGDRRES 675 >UniRef50_B2S5R2 ATP-dependent RNA helicase, DEAD/DEAH box family n=54 Tax=cellular organisms RepID=B2S5R2_BRUA1 Length = 531 Score = 546 bits (1407), Expect = e-154, Method: Composition-based stats. Identities = 201/444 (45%), Positives = 277/444 (62%), Gaps = 8/444 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +LG++ +L+ V G EP PIQ QAIP+ LEG+D++ AQTG+GKTA F+LP+LQ Sbjct: 89 FAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLPILQK 148 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 +I + + RALIL PTRELA QI + +R+ SK +I + +V GGVS Q+ ++ Sbjct: 149 IIGLGDKRR-PKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSKLSQIKRI 207 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 G+DVL+ATPGRL DL V L Q LVLDEADRMLDMGFI+D++R+ A+RQ Sbjct: 208 APGIDVLIATPGRLTDLMRDGLVDLSQTRWLVLDEADRMLDMGFINDVKRIAKATHAERQ 267 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 LFSAT +I +LAE+LL +P+ +EVA + T + ++TQ VH V K KR LLS M+ Sbjct: 268 TALFSATMPKEIASLAERLLRDPVRVEVAPQGTTASEITQVVHPVPTKEKRRLLSAMLTD 327 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 + + V+VFTRTKHGA+ + L +D AAIHGNKSQ AR RAL F+ G +R+LVAT Sbjct: 328 ADMRSVIVFTRTKHGADAVVRHLERDRYDVAAIHGNKSQNARQRALNGFRDGTLRILVAT 387 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVD-EHKLLRDIE 361 DIAARG+D+ + HVVNY+LP+ PE YVHRIGRTGR A+G +++L E LR +E Sbjct: 388 DIAARGIDVPGISHVVNYDLPDEPETYVHRIGRTGRNGASGASITLYDPATEESKLRAVE 447 Query: 362 KLLKKEIPRIAIP-GYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE---GGA 417 ++ + ++ P P P K Q R ++ + + + GE GA Sbjct: 448 RVTRSKLSIKDAPVKLAPAPVAKGPAPQGQRTEQAESRKAPAHKHRRPAQKAGEQHRAGA 507 Query: 418 KSASAKPAEKPSR--RLGDAKPAG 439 +++ + A KP R R + A Sbjct: 508 HASAGEAAPKPKRPFRSNGGQRAA 531 >UniRef50_B4MZE1 GK18312 n=1 Tax=Drosophila willistoni RepID=B4MZE1_DROWI Length = 1424 Score = 546 bits (1407), Expect = e-154, Method: Composition-based stats. Identities = 145/374 (38%), Positives = 227/374 (60%), Gaps = 8/374 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ L ++ + + Y PTPIQ+ +IP + GRDLMA AQTG+GKTA F LP+L Sbjct: 1014 TFEEAKLRDILMDNIKKSAYTVPTPIQKVSIPVISAGRDLMACAQTGSGKTAAFLLPILN 1073 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ + + +P +A+I++PTRELA QI R ++ ++ +V+GG S+ Q Sbjct: 1074 HILDKGYELEIGKP-QAIIMSPTRELAVQIFNEARKFAHNSYLKITIVYGGTSVKYQNES 1132 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTK--LPA 179 + G +L+ATPGRLLD + + + +VLDEADRMLDMGF +R+++T + Sbjct: 1133 ITKGCHILIATPGRLLDFVERTFITFEDTRFVVLDEADRMLDMGFSESMRKIITHPTMRK 1192 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 + Q L+FSATF ++I+ +A + L + + + + A VTQ ++ VDK KR L + Sbjct: 1193 EHQTLMFSATFPEEIQRMAGEFLRDYVFVTIGVIGGACSDVTQTIYEVDKFNKRAKLMEI 1252 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + +VF TK GA+ LA ++ + +IHG++ Q R +AL +FKSG ++VL Sbjct: 1253 L-RDGADGTIVFVETKRGADFLASFFSETEFPTTSIHGDRLQSQREQALREFKSGKMKVL 1311 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLV-CVDEHKLLR 358 +AT +A+RGLDI+ + HV+NY++P+ +DYVHRIGRTGR G A S + L Sbjct: 1312 IATSVASRGLDIKNVSHVINYDMPSTIDDYVHRIGRTGRVGNNGRATSFFDSDKDRALAG 1371 Query: 359 DIEKLL---KKEIP 369 D+ K+L +E+P Sbjct: 1372 DLVKILEGSGQEVP 1385 >UniRef50_C7N178 DNA/RNA helicase, superfamily II n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N178_SLAHD Length = 657 Score = 546 bits (1407), Expect = e-154, Method: Composition-based stats. Identities = 197/458 (43%), Positives = 262/458 (57%), Gaps = 14/458 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD GLS L AV + GY EPTPIQQQAIP VLEGRDL+A+A+TGTGKTA F LP + Sbjct: 8 TFDESGLSATALAAVYDLGYEEPTPIQQQAIPVVLEGRDLIAAAKTGTGKTAAFALPTMD 67 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L KG PV +I+TPTRELA QI E +K N R + + GGVS PQ+ K Sbjct: 68 KL---PYAGKGEGPV-MVIVTPTRELAMQISEVCETIAKRTNHRVVTLLGGVSYTPQIKK 123 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR G D+++ATPGRLLDL Q+ LD V++LVLDEADRMLDMGF + ++ P++R Sbjct: 124 LRSGCDIIIATPGRLLDLMRQHEADLDLVQVLVLDEADRMLDMGFWPQVSEIVDATPSER 183 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT + LL++P IE++ R +D V Q++ + ++ K LL+ I Sbjct: 184 QTLLFSATIDRSQDKVMFSLLNHPEIIEISHRGDTADLVDQYIIWTGRREKPALLNAFIR 243 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +V+VFT+TK GA++ +L K GI + AIH ++SQ R RAL F+ G V+VA Sbjct: 244 EKGGFRVIVFTKTKGGADNCTRRLCKIGIGAEAIHADRSQAQRQRALERFREGKTHVIVA 303 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+ ARG+D+ E+ +VVNY+LP +PEDYVHRIGRTGRA G A+S V D LLR I+ Sbjct: 304 TDVLARGIDVPEVDYVVNYDLPMMPEDYVHRIGRTGRAGVAGYAVSFVTPDTKNLLRSIQ 363 Query: 362 KLLKKEIPRIAI----PGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 K + ++I + YEP A R + G+ + GG Sbjct: 364 KFIGEDIQVMEFKAGEDAYEPVGKDHALAASEEEHAPKRKDRDKKNGKKGGRKHDDRGGK 423 Query: 418 K------SASAKPAEKPSRRLGDAKPAGEQQRRRRPRK 449 K + P K +R RK Sbjct: 424 KGGRKHDDREGARDDAPKGGKKKRKGNETNAEAKRARK 461 >UniRef50_A4BET4 DEAD/DEAH box helicase-like protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BET4_9GAMM Length = 579 Score = 545 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 144/390 (36%), Positives = 226/390 (57%), Gaps = 7/390 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F LGL+P +L+ + GY PTPIQ QAI +L+G D++ AQTGTGKTA F+LPLL Sbjct: 5 LTFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLL 64 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 + T + +AL+L PTRELA Q+ E + Y++ + N L ++GG + Q+ Sbjct: 65 SRIDT------TKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQL 118 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ V+V TPGR++D + + L ++ LVLDEAD ML MGFI DI +L P Sbjct: 119 RALKQNPQVIVGTPGRVMDHLRRGTLDLSDLKHLVLDEADEMLRMGFIEDIDWILEHTPK 178 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +Q LFSAT IK + ++ +P++IE+ ++ Q+ Q V K + L+ + Sbjct: 179 DKQTALFSATMPHQIKRITDQYQKDPVKIEIKASHSELQQIEQLVWRARGLDKLDGLTRI 238 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + +W +++F RT+ L+E+L G + A+ G +Q R L+ K G + ++ Sbjct: 239 LEIEDWNAIIIFVRTRVECQFLSEKLAARGYAATALSGEVAQKQREDILSAMKKGKLDII 298 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 +ATD+AARG+DIE + HV+N+++P Y HRIGRTGRA +G+A+ E +++RD Sbjct: 299 IATDVAARGIDIERITHVINWDIPGDVSTYTHRIGRTGRAGRSGKAILFCKPREQRIIRD 358 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQN 389 IE+ K E+ +P E +A ++ Sbjct: 359 IERATKSELIDYPMPSAEKLGEHRAAAFKS 388 >UniRef50_Q9GNP1 Vasa homolog n=25 Tax=Eumetazoa RepID=Q9GNP1_CIOSA Length = 770 Score = 545 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 169/419 (40%), Positives = 247/419 (58%), Gaps = 16/419 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ GL +L V Y PTP+Q+ +IP + RDLMA AQTG+GKTA F LP+L Sbjct: 314 TFEVAGLPETVLANVKRANYERPTPVQKYSIPIINADRDLMACAQTGSGKTAAFLLPVLT 373 Query: 62 HLIT---RQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 LIT + ++ RA+++ PTREL QI R +S+ +R +V +GG S+N Q Sbjct: 374 KLITNGLQSSQFSEKQTPRAIVVGPTRELIYQIFLEARKFSRGTVVRPVVAYGGTSMNHQ 433 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTK-- 176 + L+ G +L+ATPGRL+D ++ V LD VE ++LDEADRMLDMGF +IR++ + Sbjct: 434 IRDLQRGCHILIATPGRLMDFINRGLVGLDHVEFVILDEADRMLDMGFETEIRKLASSPG 493 Query: 177 LPA--KRQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKR 233 +P+ R L+FSATF D+I+ LA L + L + V R A VTQ + VD+ KR Sbjct: 494 MPSKSDRHTLMFSATFPDEIQRLAHDFLREDFLFLTVGRVGGACTDVTQSIIQVDQDDKR 553 Query: 234 ELLSHMIGK--GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADF 291 L +I + LVF TK GA+ LA L+++G + +IHG++ Q R +AL DF Sbjct: 554 AKLLELISDVAETRSRTLVFVETKRGADFLACMLSQEGCPTTSIHGDRLQQEREQALRDF 613 Query: 292 KSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLV-C 350 KS +L+AT +AARGLDI ++ HV+NY++P ++YVHRIGRTGR G A + Sbjct: 614 KSAVCPILIATSVAARGLDIPKVEHVINYDMPKEIDEYVHRIGRTGRCGNLGRATTFYDN 673 Query: 351 VDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGR--GQGGGRGQ 407 + +L R + K+L + + +PG+ + + A G++ G GGR + GGR Sbjct: 674 NKDGELARSLVKILSEA--QQEVPGWLEECAESAVGSSFGKEG-GFGGRDFRKRGGRND 729 >UniRef50_O97031 DjVLGA n=1 Tax=Dugesia japonica RepID=O97031_DUGJA Length = 726 Score = 545 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 155/374 (41%), Positives = 221/374 (59%), Gaps = 11/374 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF L L P + ++ Y PTP+Q+ A+P +++ RDLMA AQTG+GKTA F +PLL Sbjct: 212 SFLELKLHPIVSHNISLTQYTRPTPVQRYAVPIIMQRRDLMACAQTGSGKTAAFLIPLLS 271 Query: 62 HLITRQPHAK------GRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSI 115 + P + ALIL PTRELA QI + R +S +R VV+GG I Sbjct: 272 MMYQDGPGNSLSHSGYKKEYPVALILAPTRELAVQIYDEARKFSYRSLVRPCVVYGGRDI 331 Query: 116 NPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLT 175 Q+ + G ++LVATPGRL D+ + + LD + LVLDEADRMLDMGF IR+++ Sbjct: 332 RGQLQDISQGCNMLVATPGRLSDMLERCKIGLDCIRYLVLDEADRMLDMGFEPQIRKIVE 391 Query: 176 KL----PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKR 231 + P +RQ L+FSATF +I+ LA L + L + V + + S +TQ + +VD+ Sbjct: 392 QTNMPPPGQRQTLMFSATFPREIQMLASDFLKDYLFLRVGKVGSTSQNITQRIVYVDENE 451 Query: 232 KRELLSHMIGKGNWQQ-VLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALAD 290 KR+ L ++ + +LVF TK GA+ L L+ +G A+IHG++SQ R AL Sbjct: 452 KRDHLLDILTDIDSDSLILVFVETKRGADALEGFLHTEGSCVASIHGDRSQSDRELALQS 511 Query: 291 FKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC 350 F+ G +LVAT +AARGLDI + V+NY+LP E+YVHRIGRTGR GEA+S Sbjct: 512 FREGSTPILVATRVAARGLDIPNVKFVINYDLPTDIEEYVHRIGRTGRVGNLGEAISFYT 571 Query: 351 VDEHKLLRDIEKLL 364 + + +++ +L Sbjct: 572 DKNNNVAKELVDIL 585 >UniRef50_Q8H0U8 DEAD-box ATP-dependent RNA helicase 42 n=11 Tax=Viridiplantae RepID=RH42_ARATH Length = 1166 Score = 545 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 150/412 (36%), Positives = 238/412 (57%), Gaps = 8/412 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 + GL+ IL + + Y +P PIQ QA+P ++ GRD + A+TG+GKT GF LP+L+H Sbjct: 531 WHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH 590 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + + P G P+ L++ PTREL QI ++R +SK L IR + V+GG + Q+ +L Sbjct: 591 IKDQPPVEAGDGPI-GLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISEL 649 Query: 123 RGGVDVLVATPGRLLDLE---HQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 + G +++V TPGR++D+ L +V LV+DEADRM DMGF I R++ + Sbjct: 650 KRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRP 709 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ +LFSATF ++ LA K+L+ P+EI+V R+ + +TQ V + + L + Sbjct: 710 ERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLEL 769 Query: 240 IGK-GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 +G+ ++LVF +++ + L + K ++HG K Q R ++DFK+ + Sbjct: 770 LGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNL 829 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 L+AT +AARGLD++EL VVN++ PN EDYVHR+GRTGRA G A++ + D+ K Sbjct: 830 LIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAP 889 Query: 359 DIEKLLKKEIPRIAIP-GYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQ 409 D+ K L E+ +P + ++ G +Q G G G G + ++ Sbjct: 890 DLVKAL--ELSEQPVPDDLKALADGFMVKVKQGIEQAHGTGYGGSGFKFNEE 939 >UniRef50_Q4PFD9 Pre-mRNA-processing ATP-dependent RNA helicase PRP5 n=1 Tax=Ustilago maydis RepID=PRP5_USTMA Length = 1156 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 156/427 (36%), Positives = 242/427 (56%), Gaps = 10/427 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 + GL L + GY PTPIQ QA+PA++ GRD++ A+TG+GKT F LP+ +H Sbjct: 478 WSHCGLPASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRH 537 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + ++P PV +I+TPTRELA QI +R + K L +R+ V+GG I+ Q+ ++ Sbjct: 538 IKDQRPVEPSEGPV-GIIMTPTRELAVQIYREMRPFIKALGLRAACVYGGAPISEQIAEM 596 Query: 123 RGGVDVLVATPGRLLDLEHQNA---VKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 + D++VATPGRL+DL N+ L +V LVLDEADRM DMGF + ++L + Sbjct: 597 KKTADIVVATPGRLIDLLTANSGRVTNLYRVTYLVLDEADRMFDMGFEPQVMKILNNIRP 656 Query: 180 KRQNLLFSATFSDDIKALAEKLLHN-PLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ +LFSATF +++LA K+L N PLEI V R+ + ++ Q V + K L Sbjct: 657 DRQTVLFSATFPKQMESLARKVLKNKPLEITVGGRSVVAAEIEQIVEVRSEDTKFHRLLE 716 Query: 239 MI----GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSG 294 ++ + + L+F + A+ L + L + G + ++HG K Q R ++DFK+G Sbjct: 717 ILGELYNREKDARTLIFVDRQEAADDLLKDLIRKGYVTMSLHGGKDQVDRDETISDFKAG 776 Query: 295 DIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEH 354 ++ ++ AT +AARGLD+++L V+NY++PN EDYVHR GRTGRA G ++ + ++ Sbjct: 777 NVPIVTATSVAARGLDVKQLKLVINYDVPNHMEDYVHRAGRTGRAGQKGTCITFITPEQD 836 Query: 355 KLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE 414 + RDI LK + P E + E + G+ + G G G G + R Sbjct: 837 RYARDIIAALKASAAHVP-PELEAMAASFKEKLAAGKAKAAGSGFGGKGLDRFELDREKT 895 Query: 415 GGAKSAS 421 A+ ++ Sbjct: 896 LKAQKSA 902 >UniRef50_C0YHR5 ATP-dependent RNA helicase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YHR5_9FLAO Length = 562 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 150/375 (40%), Positives = 228/375 (60%), Gaps = 8/375 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEG-RDLMASAQTGTGKTAGFTLPLLQ 61 F LSPDIL+A+ E GY PT IQ+Q IP +L RDL+A AQTGTGKTA F+LP+L Sbjct: 4 FTETNLSPDILKAIGELGYESPTEIQKQTIPFILSDIRDLIALAQTGTGKTAAFSLPILD 63 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 + R ++ L+L PTREL QI +++++YSKY+ +I++ V+GG SI QM Sbjct: 64 MIDDTS------RKIQLLVLCPTRELCLQISKDIKNYSKYMKDIKTTAVYGGSSIVEQMR 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ ++V TPGR++DL ++ A+ + LVLDEAD ML MGF ++ +L++ P Sbjct: 118 SLKDKPQIIVGTPGRVIDLINRKALDFSAIHWLVLDEADEMLSMGFKDELETILSETPET 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 +Q LFSAT + +++ +++ L P I V N +T + V ++K+E L +I Sbjct: 178 KQTFLFSATMNKEVERISKNYLTKPHRISVGSINEVKKNITHEYYVVGYRQKKEALKRLI 237 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 Q ++F RT+ +A+ L ++G + A+HG+ SQ R + F+ +I +LV Sbjct: 238 DANPNQYSIIFCRTRMETQEVADFLMQNGYAADALHGDLSQAQRDTVMKKFRLKNIDILV 297 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD+ L HV+++ LP+ PE +VHR GRTGRA G +++L+ +E + L+ I Sbjct: 298 ATDVAARGLDVNSLTHVIHFSLPDDPEVFVHRSGRTGRAGKDGISMALIKPEESRKLKQI 357 Query: 361 EKLLKKEIPRIAIPG 375 + K EI IP Sbjct: 358 KSATKIEIHERTIPT 372 >UniRef50_B9SW84 Dead box ATP-dependent RNA helicase, putative n=3 Tax=Magnoliophyta RepID=B9SW84_RICCO Length = 1173 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 152/426 (35%), Positives = 243/426 (57%), Gaps = 6/426 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 ++ GL+ IL + + Y +P PIQ QA+P ++ GRD + A+TG+GKT F LP+L+ Sbjct: 528 TWHQTGLASKILETIKKLNYEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLR 587 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + G P+ LI+ PTREL QI +++ ++K L IR + V+GG + Q+ + Sbjct: 588 HIKDQPLVEAGDGPI-GLIMAPTRELVQQIHSDIKKFAKVLGIRCVPVYGGSGVAQQISE 646 Query: 122 LRGGVDVLVATPGRLLDLEHQ---NAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ G +++V TPGR++D+ L +V LV+DEADRM DMGF I R++ + Sbjct: 647 LKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIR 706 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ +LFSATF ++ LA K+L+ P+EI+V R+ + +TQ V + + L Sbjct: 707 PDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESERFLRLLE 766 Query: 239 MIGKGNWQ-QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++G+ N + ++L+F +++ + L L K G ++HG K Q R ++DFKS Sbjct: 767 LLGEWNEKGKILIFVQSQDKCDALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCN 826 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +L+AT IAARGLD++EL VVN+++PN EDYVHR+GRTGRA G A++ + ++ + Sbjct: 827 LLIATSIAARGLDVKELDLVVNFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYA 886 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 D+ K L+ ++ + + G +Q G G G G + ++ A Sbjct: 887 PDLVKALELS-EQVVPEDLKALADGFMVKVNQGLEQAHGTGYGGSGFKFNEEEDEKRIAA 945 Query: 418 KSASAK 423 K A AK Sbjct: 946 KKAQAK 951 >UniRef50_B6YWR7 DEAD/DEAH box RNA helicase n=3 Tax=Thermococcus RepID=B6YWR7_THEON Length = 403 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 153/410 (37%), Positives = 230/410 (56%), Gaps = 9/410 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGR-DLMASAQTGTGKTAGFTLPL 59 MSF++LGLS L AV +G+ +PT IQ++ IP +L G D++ +QTGTGKTA F LP+ Sbjct: 1 MSFENLGLSEATLVAVRRKGFSQPTDIQKEVIPRLLSGDADIIGQSQTGTGKTAAFALPI 60 Query: 60 LQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 ++ + ++ + V+A+IL PTRELA Q+ + ++ + V+GG I PQ+ Sbjct: 61 IEAIDEKE------KSVQAIILAPTRELALQVADEIKSLRGRKRVYVYAVYGGQPIGPQI 114 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L G V+V TPGR+LD + + L +V+ +LDEADRMLDMGFI DI + + P Sbjct: 115 RALERGTHVVVGTPGRVLDHIRRGTLDLSKVKFFILDEADRMLDMGFIDDIEAIFRETPK 174 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 K++ L+FSAT +I LA + +++ I+V+ V Q V RK L + Sbjct: 175 KKRVLMFSATMPREILRLARRYMNDYEVIKVSSDELVPGMVEQEYIEVVPARKFSTLKKI 234 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + +VF TK L+E+L K G + A++G+ SQ AR R FK+ R+L Sbjct: 235 LSDDFYG--IVFCATKRETRELSEKLRKQGYSAEALNGDMSQAARERTFWRFKTKRTRIL 292 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD++++ H+VNY LP EDYVHRIGRTGR G+A++ + E K LR Sbjct: 293 VATDVAARGLDVQDISHIVNYSLPMTAEDYVHRIGRTGRMGKKGKAVTFIMPGEFKRLRY 352 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQ 409 I + +I + + P + + Q+ GR ++ Sbjct: 353 IASVAGVDIQKSELSEELPREYHERYKREERPQRYRKNGRRDYSRGYSRR 402 >UniRef50_D1H3Q8 Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=14 Tax=Viridiplantae RepID=D1H3Q8_VITVI Length = 568 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 154/373 (41%), Positives = 231/373 (61%), Gaps = 11/373 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF +GL I++ + Y PT IQ QA+P L GRDL+ A+TG+GKTA F +P++Q Sbjct: 124 SFTDMGLHQSIMKDITFHEYTRPTFIQAQAMPVALSGRDLLGCAETGSGKTAAFAIPMIQ 183 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMM 120 H + + P +G P+ AL+L PTRELA QI + V+ +S+ L+ R+ +V GG +I+ Q Sbjct: 184 HCLAQPPVRRGDGPL-ALVLAPTRELAQQIEKEVKAFSRSLDSFRTAIVVGGTNISEQRS 242 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +LR GV+++VATPGR + + L ++ +VLDEADRMLDMGF IR V+ LP K Sbjct: 243 ELRAGVNIVVATPGRFIHHLQEGNTSLSRISFVVLDEADRMLDMGFEPQIREVMQNLPQK 302 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT +I+ LA++ L+NP++++V + + + V+Q + V + K + L ++ Sbjct: 303 HQTLLFSATMPMEIETLAQEYLNNPVQVKVGKVSCPTANVSQILEKVSESEKIDGLLALL 362 Query: 241 GKG---------NWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADF 291 + + +VF K + +AE L G+R+ A+HG +SQ R AL DF Sbjct: 363 VEEASQAERCGRPFPLTIVFVERKTRCDEVAEALVAQGLRAVALHGGRSQAEREAALRDF 422 Query: 292 KSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCV 351 ++G +LVATD+A+RGLD+ + HV+N +LP E+YVHRIGRTGRA +TG+A S Sbjct: 423 RNGATNILVATDVASRGLDVTGVAHVINLDLPKAMENYVHRIGRTGRAGSTGQATSFYTD 482 Query: 352 DEHKLLRDIEKLL 364 + L+ I K + Sbjct: 483 RDVFLVAHIRKAI 495 >UniRef50_A6RW79 Pre-mRNA-processing ATP-dependent RNA helicase prp5 n=2 Tax=Fungi/Metazoa group RepID=PRP5_BOTFB Length = 1151 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 156/441 (35%), Positives = 247/441 (56%), Gaps = 10/441 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 + GL L + + GY PT IQ QAIPA++ GRD++ A+TG+GKT F LP+ +H Sbjct: 556 WSQCGLDVKSLDVITKLGYERPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRH 615 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + ++P P+ LI+TPTRELA QI + + + K + +R++ +GG I Q+ L Sbjct: 616 IRDQRPLKGSDGPI-GLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAIIKDQIADL 674 Query: 123 RGGVDVLVATPGRLLDLEHQNA---VKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 + G +++V TPGR+++L N+ L +V +VLDEADRM DMGF + +V + Sbjct: 675 KRGAEIIVCTPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMKVFNNIRP 734 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ +LFSAT + ALA+K L +P+EI V R+ + ++TQ V ++K K L + Sbjct: 735 NRQTILFSATMPRIMDALAKKTLQSPVEIVVGGRSVVAPEITQIVEVREEKEKFHRLLEL 794 Query: 240 IGK----GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295 +G+ + L+F + A+ L + L + G +IHG K Q R + DFK+G Sbjct: 795 LGELYNTDEDARTLIFVDRQEKADDLLKDLMRKGYPCMSIHGGKDQVDRDSTIDDFKAGV 854 Query: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK 355 + +++AT +AARGLD+++L VVN++ PN EDYVHR GRTGRA TG A++ + ++ + Sbjct: 855 VPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQEQ 914 Query: 356 LLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG 415 I K L++ + E S K + +++G ++ G RG+G R + R Sbjct: 915 YSVGIAKALEQSGQEVPDRLNEMRKSYK-DKVKSGAKKESSGFRGKGLERFDAE-REATK 972 Query: 416 GAKSASAKPAEKPSRRLGDAK 436 + + P + LG K Sbjct: 973 ARELVQPAASTAPPKLLGVPK 993 >UniRef50_B7QFN5 ATP-dependent RNA helicase, putative n=1 Tax=Ixodes scapularis RepID=B7QFN5_IXOSC Length = 519 Score = 544 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 142/398 (35%), Positives = 220/398 (55%), Gaps = 6/398 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++ D + + EP+PIQ QA P VL GRDL+ AQTG+GKT + LP Sbjct: 94 LTLDECNFPEPCRELFRSKNFTEPSPIQAQAWPVVLGGRDLVGIAQTGSGKTLAYVLPAA 153 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRD-YSKYLNIRSLVVFGGVSINPQM 119 H+ + + P+ ++L PTREL QI + + ++ V+GGVS PQ+ Sbjct: 154 IHMSDQPQPERDEGPI-GVVLAPTRELVQQISQVAYEWCGGAFRLKGAPVYGGVSKGPQI 212 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 +L+GG + +ATPGRLLD+ A+ L + LVLDEADRMLDMGF IR+++ + Sbjct: 213 ARLQGGAHICIATPGRLLDILETGAINLLRCSYLVLDEADRMLDMGFEPQIRKIVDQTRP 272 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNT-ASDQVTQHVHFVDKKRKRELLSH 238 RQ +++SAT+ +++ LAE+ L + ++I V + A+ + Q VH K E L Sbjct: 273 DRQTVMWSATWPSEVRDLAEEFLTDHVQITVGSEDLCANHNIRQVVHVCQGFEKEEKLLE 332 Query: 239 MIGK---GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295 + + Q+ L+F TK + + L K+G R+ A HG+ SQ R AL F+SG Sbjct: 333 TLREINAEGDQRTLIFVATKARVVTIVQNLYKNGFRAVATHGDLSQNKRDIALDRFRSGK 392 Query: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK 355 +LVATD+AARGLD+ ++ +V+NY+ P+ E YVHRIGRTGR+ +G A++L D Sbjct: 393 TPILVATDVAARGLDVSDIKYVINYDYPDTSESYVHRIGRTGRSNRSGTAITLFTPDNAG 452 Query: 356 LLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQ 393 + + +L++ + E ++ N R++ Sbjct: 453 QAKQLVSVLQEAKQEVNPELLELVDRQVSQKFANRRRR 490 >UniRef50_C8PPF9 ATP-dependent RNA helicase DbpA n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PPF9_9SPIO Length = 605 Score = 544 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 171/456 (37%), Positives = 248/456 (54%), Gaps = 14/456 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F + L +L+ + E GY E TP+Q+Q A ++G DL +QTGTGKTA + + L+ Sbjct: 12 MNFSNFNLDSHLLQGLEEAGYIECTPVQEQVFSAGMDGSDLYVQSQTGTGKTAAYLVTLM 71 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q ++ + + RRP ALIL PTRELA Q+ E KY +R+ +GGV Q Sbjct: 72 QRMLAQG--TESRRP--ALILVPTRELAVQVEEEAHKLGKYTGLRAASFYGGVGYQQQEE 127 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA- 179 L+ GVD+++ TPGR++DLE +KL V LV+DEADRM DMGF D+R +L+ L Sbjct: 128 ALKNGVDLIIGTPGRVIDLEKSKTMKLKHVGFLVIDEADRMFDMGFYPDLRSLLSVLSKA 187 Query: 180 -KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 +RQ +LFSAT + +K LA + + EI + N D++ Q + V +K LL Sbjct: 188 EERQTMLFSATLNTWVKNLAWEYTIDAKEITIDADNVTVDEINQKLFHVAADQKMSLLLG 247 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + ++F TK +A++L +G + + G+ Q R + FK+G + Sbjct: 248 ILRNEKPENTIIFCNTKKTTEIVAKRLRINGYATEFLIGDLPQPKRLHIIDSFKAGKLTC 307 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARG+DI +L V+NY+LPN E+YVHRIGRT RA TG A SL + L Sbjct: 308 LVATDVAARGIDINDLAMVINYDLPNEAENYVHRIGRTARAGKTGAAYSLCSEQDVYNLP 367 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAK 418 DIEK ++ +IP + IPG E D Q R R + GGR ++PR GE + Sbjct: 368 DIEKYIEAKIPVV-IPG-EEDFEKDRSADQYIRLDRDSAD-EERGGRFGRKPRPGEKSRR 424 Query: 419 SASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 R A+PA +R +K + Sbjct: 425 EDKDAR-----RGTKTARPASRTADSKRKKKGTQGE 455 >UniRef50_UPI0001C311D7 DEAD/DEAH box helicase domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C311D7 Length = 481 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 152/411 (36%), Positives = 230/411 (55%), Gaps = 8/411 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS +L A+ + GY P+PIQ+QAIP +L G D++ AQTG+GKTA F LPL++ Sbjct: 3 TFADLGLSAPVLEALRDVGYENPSPIQEQAIPPLLAGNDMIGQAQTGSGKTAAFGLPLME 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 ++ R V+AL+LTPTREL Q+ + +R Y I + VFGG I Q + Sbjct: 63 YVD------PSDRDVQALVLTPTRELCIQVTQALRSYGARKGIDVVAVFGGAPIRSQQAQ 116 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR G ++V T GR+ DL ++++ L +VLDEAD MLD+GF+ D+ ++L P R Sbjct: 117 LRAGGQIVVGTVGRVKDLISRHSLMLHGTRFVVLDEADEMLDLGFLEDVEKILALTPGSR 176 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT +I+ L+E+ L+NP+ ++V D V Q + ++ K ++L ++ Sbjct: 177 QTALFSATMPPEIRKLSERYLYNPVHVKVRAATLTVDTVEQFSLEMSQRDKPDMLGTVLE 236 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 Q +VF RTK + L L G+ A+HG+ SQG R + FKSG + +LVA Sbjct: 237 SEKPDQAIVFVRTKIRCDQLYRTLRDRGMNVKALHGDMSQGQRDGVMLSFKSGRLPILVA 296 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLDI + HVVN+++P P+ YVHRIGRTGR +G A++ + + + IE Sbjct: 297 TDVAARGLDISSVTHVVNFDVPTSPDVYVHRIGRTGRVGRSGRAITFYDSKQKRDIEAIE 356 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRR 412 + + + ++ +P ++ + G R R Sbjct: 357 RHTRTPMAPWTAGARVAALRVEVKPKRHESKPHDAA--PTNGDRAATDGAR 405 >UniRef50_C7PCT4 DEAD/DEAH box helicase domain protein n=20 Tax=Bacteria RepID=C7PCT4_CHIPD Length = 444 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 170/445 (38%), Positives = 254/445 (57%), Gaps = 11/445 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M FD L +L + GY TP+Q++ IP ++ G+D++A AQTGTGKTA F LP+L Sbjct: 1 MYFDEFDLDDRVLDGIDAMGYTTATPVQEKVIPPIIAGKDILACAQTGTGKTAAFLLPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVS---INP 117 LIT A R + +LI+ PTRELA QI + + S + ++ S+ V+GG + Sbjct: 61 HRLITEPHDA---RKINSLIIVPTRELAVQIAQTLEGMSYFTSVSSIAVYGGSNGALFAA 117 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 + L GVD+++ TPGR++ + VKLD V+ LVLDEADRMLDMGF DI R+ + L Sbjct: 118 EKKALTSGVDIVICTPGRMIAHLNMGYVKLDAVKYLVLDEADRMLDMGFSDDIIRITSTL 177 Query: 178 PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 P +RQNLLFSAT D I+ LA K+LH P EI +A + +++ Q V +++K L+ Sbjct: 178 PKERQNLLFSATMPDKIRKLALKILHQPEEINIA-ISKPPEKIVQEAFVVFEEQKTGLIK 236 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++ + + +++F K L +L K IH + Q R + L DFK+ ++ Sbjct: 237 QLLARKEFGCIIIFCSRKQNVKQLTYELKKARFSVEEIHSDLEQDKREQVLMDFKNKKLK 296 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVATDI +RG+DIE++ V+NY++PN EDY+HRIGRT RAA G A +++ E + Sbjct: 297 MLVATDILSRGIDIEDIDLVINYDVPNDAEDYIHRIGRTARAATDGTAYTIISEKEQRKF 356 Query: 358 RDIEKLLKKEIPRIAIP-GYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 IE++L K + + +P P P +P ++G +R G + GGG G + GG Sbjct: 357 ARIEEVLGKPVTKAEVPAALGPVPEYSPKPFRSGGGKRPQGKKRPGGGGGGNRNHSKPGG 416 Query: 417 AKSASAK---PAEKPSRRLGDAKPA 438 + + P S+ KPA Sbjct: 417 NQGPRPQGGHPQHHKSKNNSGGKPA 441 >UniRef50_UPI00019259AA PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 n=2 Tax=Hydra magnipapillata RepID=UPI00019259AA Length = 790 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 147/417 (35%), Positives = 216/417 (51%), Gaps = 8/417 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF G ++ + Y +PTPIQ QA+P L GRD++ A+TG+GKTA F P+L Sbjct: 276 ISFGHFGFDDHLMGVIRSSNYSKPTPIQSQAVPVALSGRDIIGIARTGSGKTAAFVWPML 335 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H++ + +G P+ ALI PTREL QI + + K N+R + +GG S Q Sbjct: 336 VHIMAQPVLKEGDGPI-ALICAPTRELCQQINSECKRFGKCYNLRVIACYGGGSKWEQTK 394 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ G +++V TPGRL+DL A L +V LV DEADRM DMGF +R + + Sbjct: 395 GLQQGAEIVVCTPGRLIDLIKAKATNLLRVTYLVFDEADRMFDMGFEPQVRSIANNVRPD 454 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFV--DKKRKRELLSH 238 RQ LLFSAT ++ L +L +P+ I V A++ + Q V + +++ LLSH Sbjct: 455 RQCLLFSATMKKKVEWLCRDILSDPIRIVVGELGEANEDIVQAVEVMKSPQQKWNWLLSH 514 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + VL+F K + +A L + G IHG+ Q R L FK + Sbjct: 515 IVEFTSGGSVLIFVTKKSNSEEVAANLKEQGYELGLIHGDFDQFERNNVLKQFKQKQFLI 574 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLDI + V+NY++ + HRIGRTGRA G A +L+ + Sbjct: 575 LVATDVAARGLDIPSIKTVINYDVARDITTHTHRIGRTGRAGEKGIAYTLITPQDTHFAA 634 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG 415 D+ + L+ R +P D ++K + R +RG R + R G G Sbjct: 635 DLVRNLEGANQR--VPDELLDLALKNPWFRKTRAKRG---RKAANKEFTPRDRPGLG 686 >UniRef50_B9ETM9 Putative uncharacterized protein n=2 Tax=Oryza sativa RepID=B9ETM9_ORYSJ Length = 468 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 143/405 (35%), Positives = 227/405 (56%), Gaps = 34/405 (8%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +G +L+ + + G+ EPTPIQ Q P L GRDL+ A+TG+GKT + LP + H Sbjct: 93 FRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVH 152 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + + A G P+ L+L PTRELA QI + + Sbjct: 153 VNAQPILAPGDGPI-VLVLAPTRELAVQIQQEATKF------------------------ 187 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 GV++++ATPGRL+D+ + L +V LVLDEADRMLDMGF I+++++++ RQ Sbjct: 188 --GVEIVIATPGRLIDMIESHHTNLRRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQ 245 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMIG 241 L +SAT+ +++ LA L +P ++ + A+ ++QHV + + +K L +++ Sbjct: 246 TLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLE 305 Query: 242 K-GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + ++L+F TK G + + QL DG + +IHG+KSQ R L++FKSG ++ Sbjct: 306 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMT 365 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD++++ +V+NY+ P EDYVHRIGRTGRA A G A + + +D+ Sbjct: 366 ATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDL 425 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGR 405 +L++ +++ + A P +G + R RG GGGR Sbjct: 426 INILEEAGQKVSPE--LANMGRGAPPPSSGHRDR---YRGYGGGR 465 >UniRef50_C4R557 RNA helicase in the DEAD-box family, necessary for prespliceosome formation n=1 Tax=Pichia pastoris GS115 RepID=C4R557_PICPG Length = 784 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 157/449 (34%), Positives = 250/449 (55%), Gaps = 9/449 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 + L L + + + Y PTPIQ +A+P ++ G+DL+ A+TG+GKT F LP+ + Sbjct: 217 WCQLALPQQFMSVIEDLKYEAPTPIQSEALPNLMSGKDLIGIAKTGSGKTLAFLLPMFRQ 276 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 +I++ G P+ +ILTPTRELA QI + + + K LN++ + V+GG SI+ Q+ + Sbjct: 277 IISQPDPESGEGPI-GVILTPTRELALQIFKECKPFMKSLNLKGICVYGGASISQQISDI 335 Query: 123 RGGVDVLVATPGRLLDLEHQNA---VKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 + V V TPGRL+DL N+ L + LVLDEADRM DMGF + +++ Sbjct: 336 KKRVHFAVCTPGRLIDLLTANSGRVTNLSRTSYLVLDEADRMFDMGFEPQVMKIIPNTRP 395 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ L+FSATF ++ALA+K+L+NPLE+ V ++ +D +TQ V +D + + L + Sbjct: 396 DRQTLVFSATFPPKMEALAKKVLNNPLEVIVGEKSVVADTITQKVFVIDPQERFSKLLEL 455 Query: 240 I----GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295 + K +VLVF + A+ L L K G + ++HG K Q R + DFK+G+ Sbjct: 456 LGTFKSKDPTGKVLVFVERQDSADVLLTNLLKRGYNAQSLHGGKEQMDRDFIIQDFKTGN 515 Query: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK 355 +LVAT +AARGLD++ L V+NY+ PN EDYVHR+GRTGRA +TGEA++ + +++ Sbjct: 516 SDILVATSVAARGLDVKRLNLVINYDSPNHMEDYVHRVGRTGRAGSTGEAVTFLTAKDYR 575 Query: 356 LLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG 415 D+ + LK ++ + ++ E ++ G +RG G G+G + Q++ Sbjct: 576 AAYDVSRALKVS-KQLVPDNVQAVANVFIEQLKTGSAKRGSGYGGKGLEKLQEERELKRQ 634 Query: 416 GAKSASAKPAEKPSRRLGDAKPAGEQQRR 444 K+ + + A Sbjct: 635 LEKTTYGDEVATADPKKENTHGATATPPP 663 >UniRef50_A3ZWP8 ATP-dependent RNA helicase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZWP8_9PLAN Length = 428 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 156/427 (36%), Positives = 246/427 (57%), Gaps = 4/427 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +++ + LS ++ A+ Y +P+PIQ IP LEGRD++ A+TGTGKTA F +P++ Sbjct: 4 INYADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPII 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L H R +ALILTPTRELA Q+ + + + I + V+GG + QM Sbjct: 64 ERL----EHGPNSRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQME 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL+ ++V TPGR++DL + A++L+ + +VLDEADRMLD+GF DI ++L + P + Sbjct: 120 KLKRAPHIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRRCPEE 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LL SAT I+ LA++ + NP +++ + N +++ + Q VD +K ++L ++ Sbjct: 180 RQTLLLSATVPPTIEKLAQRYMRNPEKVDFSPTNISAETIEQRYFTVDHSKKFDMLVELL 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + Q+ +VF RTK G + ++L+K IHG+ QGAR RAL+DFK+ RVLV Sbjct: 240 KREQPQKAIVFCRTKRGTERITQRLSKKTKLVHCIHGDMQQGARNRALSDFKASKFRVLV 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+ RG+DI ++ H++NY++P +DYVHR+GRTGR G A + V +E L I Sbjct: 300 ATDVVGRGIDISDVSHIINYDIPEFSDDYVHRVGRTGRMGKEGIAYTFVTPEEGNELTRI 359 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 E + K + R +PG+ P + G + G ++P+ + + Sbjct: 360 EVRIDKLLIRDELPGFAPYERTDVDTGPGPAATAIGPDGQKEVGMVTEEPKAEPPKSLKS 419 Query: 421 SAKPAEK 427 AK K Sbjct: 420 RAKRYRK 426 >UniRef50_C9DQK7 VASA DEAD-box protein n=5 Tax=Chordata RepID=C9DQK7_9ASCI Length = 851 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 169/414 (40%), Positives = 239/414 (57%), Gaps = 13/414 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF++ L I V Y PTP+Q+ ++P +L RDLMA AQTG+GKTA F LP+L Sbjct: 385 SFEAANLPETIAANVKRANYDSPTPVQKFSLPIILADRDLMACAQTGSGKTAAFLLPVLT 444 Query: 62 HLITRQPHAKG---RRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 +L+ + ++ +A+I+ PTREL QI R +S+ IR +V +GG S N Q Sbjct: 445 NLVRTGLASSSFSEKQLPQAIIVGPTRELVYQIYLEARKFSRGTIIRPVVAYGGTSTNYQ 504 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTK-- 176 + +L+ G +L+ATPGRL+D ++ + L V+ ++LDEADRMLDMGF +IR+++ Sbjct: 505 LKELQKGCHLLIATPGRLMDFINRGKIGLSSVQYIILDEADRMLDMGFETEIRKLVDSPG 564 Query: 177 LPAK--RQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKR 233 +PAK R L+FSATF D+I+ LA L + L + V R A VTQ V VD+ KR Sbjct: 565 MPAKNERHTLMFSATFPDEIQKLAHDFLREDFLFLTVGRIGGACSDVTQVVLQVDQGDKR 624 Query: 234 ELLSHMIGK--GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADF 291 L ++ + LVF TK A+ LA L ++G + +IHG++ Q R AL DF Sbjct: 625 NKLIELLADVADTGSRTLVFVETKRSADFLACSLCQEGYPTTSIHGDRLQQEREEALRDF 684 Query: 292 KSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCV 351 KSG +LVAT +AARGLDI ++ HVVNY+LP+ ++YVHRIGRTGR G A S Sbjct: 685 KSGKCPILVATSVAARGLDIPKVEHVVNYDLPSEVDEYVHRIGRTGRCGNLGRATSFYDD 744 Query: 352 D-EHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGG 404 L R + K+L I +P + + + A G+ + G GGR G Sbjct: 745 SANASLARSLVKILADSIQE--VPSWLEECAESAVGTSFGKDRGGFGGRDTRRG 796 >UniRef50_O26305 ATP-dependent RNA helicase, eIF-4A family n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26305_METTH Length = 425 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 156/378 (41%), Positives = 228/378 (60%), Gaps = 9/378 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F +S DI RA+ + G+ TPIQ +P L+G D++ AQTGTGKTA F +P+L Sbjct: 4 LEFSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVL 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 ++L + R +ALI+ PTREL Q+ E ++ KY+ ++ L V+GG SI Q+ Sbjct: 64 ENL-------EAERVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIA 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +LR GV V+VATPGRL+D + V L + +VLDEAD ML+MGFI DI R+L+ +P + Sbjct: 117 QLRRGVHVIVATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFIDDIERILSHVPER 176 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT S I +A K + NP + V ++++ ++ + ++ K ELL ++ Sbjct: 177 RQTMLFSATVSKPILRIARKYMRNPQVMRVEKKHS--PKIDEFYFKTREEDKVELLDWIL 234 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 N + L+F TK L QLN+ G + IHG+ SQ R R + F+ GD +LV Sbjct: 235 SSNNIRMGLIFCNTKRRVQRLRRQLNRMGYSADEIHGDLSQSKRERVMERFRRGDFSLLV 294 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+ + ++ VVNY+LP E YVHRIGRTGRA ++G++ +LV E LR I Sbjct: 295 ATDVAARGIHVPDVEAVVNYDLPFENEYYVHRIGRTGRAGSSGKSFTLVVGSEVHRLRRI 354 Query: 361 EKLLKKEIPRIAIPGYEP 378 + K I + +P E Sbjct: 355 QSFTGKRIKQSNMPSPEE 372 >UniRef50_Q28T45 DEAD/DEAH box helicase-like protein n=18 Tax=Alphaproteobacteria RepID=Q28T45_JANSC Length = 644 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 172/393 (43%), Positives = 238/393 (60%), Gaps = 12/393 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L L+P + +A+ E GY PTPIQ AIP L GRD++ AQTGTGKTA FTLP++ Sbjct: 12 TFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPMIT 71 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L + A R R+L+L PTRELAAQ+ EN Y+K++ + ++ GGVS Q Sbjct: 72 MLARGRARA---RMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQEQA 128 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 + GVDVL+ATPGRLLD + + L+ V+++V+DEADRMLDMGFI DI R+ +P R Sbjct: 129 IDKGVDVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLDMGFIPDIERIFGLVPFTR 188 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHF-------VDKKRKRE 234 Q L FSAT + +I+ + L NP +IEV R++T S + Q + K KR+ Sbjct: 189 QTLFFSATMAPEIERITNTFLSNPEKIEVERQSTTSATIEQRLIEFKAPRRDAQAKMKRD 248 Query: 235 LLSHMIGKGN--WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFK 292 +L I ++ ++F K + +A+ L K + + IHG+ Q R R LA F+ Sbjct: 249 MLRAAITAEGDAFRNAIIFCNRKVDVDIVAKSLKKHNLNAEPIHGDLDQSHRMRTLAGFR 308 Query: 293 SGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVD 352 G I +LVA+D+AARGLDI + HV+NY++P+ EDYVHRIGRTGRA TG A++L Sbjct: 309 DGSITLLVASDVAARGLDIPNVSHVINYDVPSHAEDYVHRIGRTGRAGKTGVAITLCVPS 368 Query: 353 EHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAE 385 + K L IE L+K+ IPR P P + E Sbjct: 369 DEKYLGAIEGLIKQPIPRAEAPMDAGTPKAETE 401 >UniRef50_Q26696 Putative DEAD-box RNA helicase HEL64 n=7 Tax=Trypanosomatidae RepID=DDX17_TRYBB Length = 568 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 164/432 (37%), Positives = 234/432 (54%), Gaps = 22/432 (5%) Query: 2 SFDSLG--LSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPL 59 SFD L + P +L+ + Q + PTP+Q Q+ P +L GRDL+ A+TG+GKT GF +P Sbjct: 101 SFDHLCGIVPPYLLKKLTAQNFTAPTPVQAQSWPVLLSGRDLVGVAKTGSGKTLGFMVPA 160 Query: 60 LQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 L H+ ++P G P+ ++L PTRELA QI E + ++ V+GG PQ+ Sbjct: 161 LAHIAVQEPLRSGDGPM-VVVLAPTRELAQQIEEETKKVIPG-DVYCGCVYGGAPKGPQL 218 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 LR GV +LVATPGRL+D + L +V LVLDEADRMLDMGF +R++ ++ Sbjct: 219 GLLRRGVHILVATPGRLIDFLDIKRINLHRVTYLVLDEADRMLDMGFEPQVRKICGQIRP 278 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSH 238 RQ ++FSAT+ +I+ LA + + I V A+ VTQ + K++ L Sbjct: 279 DRQTVMFSATWPREIQRLAAEFQKQWIRISVGSTELQANKDVTQRFILTQEFAKQDELRK 338 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + ++VLVF + K A+ L QL + G + AIHG+K Q R LA F+ Sbjct: 339 LMQEHREERVLVFCKMKRTADELERQLRRWGYDAMAIHGDKEQRQREFILARFRKDPRLC 398 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLDI++L V+NY+ P +DYVHRIGRTGRA G + L+ E ++ Sbjct: 399 LVATDVAARGLDIKQLETVINYDFPMQIDDYVHRIGRTGRAGGEGRCVYLITKKEAQITP 458 Query: 359 DIEKLL-------KKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPR 411 + K L ++EIP I P + ++ RG G GR Q P Sbjct: 459 SVLKELIGILERAQQEIPDWMIEWNAQQPRYQV------KRNRGMNG----FGRHQSAPF 508 Query: 412 RGEGGAKSASAK 423 G S SA Sbjct: 509 LRNGHRPSFSAN 520 >UniRef50_B1V958 DEAD/DEAH box helicase-like n=4 Tax=Candidatus Phytoplasma RepID=B1V958_PHYAS Length = 564 Score = 542 bits (1399), Expect = e-153, Method: Composition-based stats. Identities = 139/392 (35%), Positives = 218/392 (55%), Gaps = 10/392 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F+ L + +A+ E + E TPIQ IP +++G D++ AQTGTGKT F +P+++ Sbjct: 5 FEQLPILEQTKKALQELNFIEATPIQALVIPEIIQGHDVIGQAQTGTGKTFAFGIPIIEK 64 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMMK 121 + + ++LIL PTREL Q+ E ++ +Y IR VVFGG S Q Sbjct: 65 IDYKLSK------TQSLILCPTRELTLQVYEELKKLLRYYPQIRIAVVFGGESYTKQFRA 118 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L +++ATPGR++D + + L ++IL LDEAD ML MGF + +L ++P +R Sbjct: 119 LESKPHLIIATPGRVIDHIERGKIDLSALKILTLDEADEMLKMGFQEALETILKQIPEER 178 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q +LFSAT IK +A K N ++V + A + + Q+ V + K +LL ++ Sbjct: 179 QTVLFSATLPPSIKQIASKYQKNTKILQVPVKKLAVNAIEQYYFLVKEFDKNKLLVRLLD 238 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 ++F TK + + L G + A+HG+ Q R + +F+ G I++L+A Sbjct: 239 LKRDYSTILFANTKKDVDEITSFLQDKGFLADAVHGDLKQNQRQYVMNNFRKGKIKILIA 298 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARG+DI ++ VVNY+LP+ E YVHRIGRTGRA G A S + + L+ +E Sbjct: 299 TDVAARGIDISDIKMVVNYDLPHEDEVYVHRIGRTGRAGKKGLAYSFISPRKFSQLKKLE 358 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQ 393 LK+++ + IP E IK + ++N Q+ Sbjct: 359 YYLKEKVKFLEIPSVE---EIKKQILENFEQK 387 >UniRef50_Q7K4L8 LD33749p n=15 Tax=Bilateria RepID=Q7K4L8_DROME Length = 703 Score = 542 bits (1398), Expect = e-153, Method: Composition-based stats. Identities = 141/394 (35%), Positives = 235/394 (59%), Gaps = 7/394 (1%) Query: 2 SFDS-LGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +F+ PD+L + + G+ +P+PIQ QA P +L+G D++ AQTGTGKT F LP + Sbjct: 283 TFEQCFAEYPDMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGM 342 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H + R L+L PTRELA QI V+ YS + ++++ V+GG + N Q+ Sbjct: 343 IHTEYQSTPRGTRGGANVLVLAPTRELALQIEMEVKKYS-FRGMKAVCVYGGGNRNMQIS 401 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L G ++++ TPGRL DL N + + + LVLDEADRMLDMGF IR+V+ + Sbjct: 402 DLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPD 461 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTAS-DQVTQHVHFV-DKKRKRELLSH 238 RQ ++ SAT+ ++ LA+ + NP+++ V + A+ V Q + + D K ++ Sbjct: 462 RQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITS 521 Query: 239 MIGKGN-WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + + ++++F K A+ L+ +L DG + IHGN+ Q R +A+AD KSG +R Sbjct: 522 FVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVR 581 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVATD+A+RGLDIE++ HV+NY+ P+ E+YVHR+GRTGRA G ++S ++ + Sbjct: 582 ILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTREDWAMA 641 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGR 391 +++ ++L++ +P + + + + +++ R Sbjct: 642 KELIEILQEA--EQEVPDELHNMARRFKAMKDKR 673 >UniRef50_A8P4I3 ATP-dependent RNA helicase An3, putative n=2 Tax=Brugia malayi RepID=A8P4I3_BRUMA Length = 754 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 167/426 (39%), Positives = 240/426 (56%), Gaps = 27/426 (6%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L L P I + GY PTP+Q+ +IP ++ RDLM+ AQTG+GKTA F +PL+ + Sbjct: 291 FADLKLHPWIEGNIRLSGYGRPTPVQKYSIPTLMNNRDLMSCAQTGSGKTAAFLVPLINN 350 Query: 63 LITRQPHAKGRRPVR----------ALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGG 112 ++ P A + + ALIL+PTREL+ QI R ++ I S +++GG Sbjct: 351 VLQAGPEALYKSTTQQNGRRRQYPAALILSPTRELSLQIYNESRKFAYRTPITSALLYGG 410 Query: 113 -VSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIR 171 + Q+ KLR GV +L+ATPGRL+D+ Q + LD LVLDEADRMLDMGF IR Sbjct: 411 RENYREQINKLRLGVHILIATPGRLIDVMEQGLIGLDGCRFLVLDEADRMLDMGFEPQIR 470 Query: 172 RV--LTKLPAKRQ--NLLFSATFSDDIKALAEKL-LHNPLEIEVARRNTASDQVTQHVHF 226 ++ L+K+P K Q +FSATF +I+ LA+ + N + + V R + S+ + Q + + Sbjct: 471 QIVDLSKMPPKGQRVTAMFSATFPKEIQVLAQDFLMPNYVFLAVGRVGSTSENIMQKIVW 530 Query: 227 VDKKRKRELLSHMIGKGNWQ-QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGART 285 V++ K+ L ++ G LVF TK GA+ LA L KDG AIHG+ Q R Sbjct: 531 VEEHEKKSFLMDLLDAGEPSALTLVFVETKRGASDLAYYLQKDGYNVVAIHGDLKQFDRE 590 Query: 286 RALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEA 345 + L F+SG +LVAT +AARGLDI + HV+NY+LP+ ++YVHRIGRTGR G A Sbjct: 591 KHLETFRSGVATILVATAVAARGLDIPNVKHVINYDLPSDIDEYVHRIGRTGRVGNVGLA 650 Query: 346 LSLVCVDEHKLLRDIEKLL---KKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQG 402 S + RD+ +L+ +E+P E I A+ + G + G + Sbjct: 651 TSFFNDKNRNIARDLAELVVEANQELP-------EWLEKISADAQRYGTRPGRAKGGSRF 703 Query: 403 GGRGQQ 408 GGR + Sbjct: 704 GGRDHR 709 >UniRef50_C4LZM8 DEAD/DEAH box helicase, putative n=4 Tax=Entamoeba RepID=C4LZM8_ENTHI Length = 578 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 153/411 (37%), Positives = 232/411 (56%), Gaps = 16/411 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F + L ++ + + G+ P P+Q+ IP VL+ RDLM+ AQTG+GKTA F P++ Sbjct: 132 TFYDIDLGEELDHNIFKAGFYHPMPVQKATIPIVLDKRDLMSCAQTGSGKTAAFLFPIIS 191 Query: 62 HLITRQPHAKGRRP-------VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVS 114 ++ P + ALIL PTREL QI E +++ IRS+ V+GG Sbjct: 192 DILKNPPMPRQSNFSHRVTVFPVALILAPTRELGQQIYEEAVRFTEDTPIRSVCVYGGSD 251 Query: 115 INPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVL 174 Q+ ++ G D+LVATPGRLL + V L V L+ DEADRMLDMGF IR + Sbjct: 252 SYTQIQEMGKGCDILVATPGRLLYFTEKKIVSLSSVRYLIFDEADRMLDMGFEPQIREIC 311 Query: 175 T--KLPA--KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK 230 ++P KRQ L+FSATF I+ LA L + + I V R + + + Q + +V+++ Sbjct: 312 EDNEMPPVGKRQTLMFSATFPKQIQRLAADFLDDYVFITVGRAGSTVESIQQIILWVEEE 371 Query: 231 RKRELLSHMIGK--GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRAL 288 K+E + ++G+ G Q+ ++F TK GA+ L L G + +IHG++SQ R +L Sbjct: 372 IKQEAILDVLGEFAGKGQKTVIFVETKRGADILENYLYDHGYKVDSIHGDRSQADRDFSL 431 Query: 289 ADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSL 348 FK I++LVATD+A+RGLDI ++ V+NY++PN E YVHR+GRTGRA G A++ Sbjct: 432 KRFKENVIQLLVATDVASRGLDIPDIEVVINYDMPNEIESYVHRVGRTGRAGKKGTAITF 491 Query: 349 VCVDEHKLLRDIEKLLKKEIPRIAIP-GYEPDPSIKAEPIQNGRQQRGGGG 398 + L+ + LL++ + IP E +P + R ++GG Sbjct: 492 INEKTQNLIPPLVSLLEEA--KQTIPDWLEEKAQEYRKPFGSKRGRKGGYN 540 >UniRef50_Q5HME0 Probable DEAD-box ATP-dependent RNA helicase SERP1688 n=56 Tax=Staphylococcus RepID=Y1688_STAEQ Length = 509 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 140/389 (35%), Positives = 227/389 (58%), Gaps = 8/389 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LG+S ++ + G++EPTPIQ+ +IP LEG D++ AQTGTGKT F +PL++ Sbjct: 3 NFKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGDDILGQAQTGTGKTGAFGIPLIE 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 ++ +Q V++LIL PTRELA Q+ E +R++SK ++ + VFGG+ I Q+ Sbjct: 63 KVVGQQ-------GVQSLILAPTRELAMQVAEQLREFSKGQKVQVVTVFGGMPIERQIKA 115 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP-AK 180 L+ G ++V TPGR++D ++ +K + L+LDEAD M++MGFI D+R ++ K+P + Sbjct: 116 LKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTLILDEADEMMNMGFIDDMRFIMDKIPAEQ 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT I+ L ++ + P I+ + Q+ ++ V + K + ++ + Sbjct: 176 RQTMLFSATMPKAIQELVQQFMKAPKIIKTMNNEMSDPQIDEYYTIVKELEKFDTFTNFL 235 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +VF RTK + L L G ++ +HG+ +Q R L FK+ I +LV Sbjct: 236 DVHQPELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILV 295 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI + HV N+++P E Y HRIGRTGRA G A++ V E +R I Sbjct: 296 ATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQI 355 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQN 389 E + + + + P + + + I++ Sbjct: 356 EDVNNRRMKALRPPHRKEVLKAREDDIKD 384 >UniRef50_C5S7U5 DEAD/DEAH box helicase domain protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7U5_CHRVI Length = 662 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 159/374 (42%), Positives = 226/374 (60%), Gaps = 7/374 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 FD+LGLSP I +AV GY PT IQ Q IP +L GRDL+ AQTGTGKTA F LP+L Sbjct: 11 FDALGLSPVIAQAVKNLGYESPTAIQSQCIPHLLAGRDLLGQAQTGTGKTAAFALPMLSR 70 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMK 121 L R + L+LTPTRELA Q+ E + Y+ L L ++GG Q+ + Sbjct: 71 LD------PDLRKPQVLVLTPTRELALQVAEAFQRYATDLKGFNVLPIYGGQGYGLQLSQ 124 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ V+V TPGR++D + + LD + LVLDEAD ML+MGF DI + + PA+R Sbjct: 125 LKRNPQVIVGTPGRVMDHIRRGTLALDSIRALVLDEADEMLNMGFAEDIDWIFDQAPAER 184 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT I+ +A+ L +P+E+++A + D + QH V + K ++L+ ++ Sbjct: 185 QVALFSATMPPAIRRVAQTRLVDPVEVKIAANSETVDTIEQHHCIVTRFHKLDVLTRIME 244 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +L+F RTK+ LA++L G + ++G+ +Q R R + K G + VLVA Sbjct: 245 LEPFDGLLIFVRTKNATTELADKLKAHGFAAEPLNGDMNQEMRERTVERLKQGQLDVLVA 304 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + HVVNY++P P YVHRIGRTGRA G A+ LV E LL+ IE Sbjct: 305 TDVAARGLDVERISHVVNYDIPTDPSAYVHRIGRTGRAGRAGRAILLVEPRERGLLKSIE 364 Query: 362 KLLKKEIPRIAIPG 375 +++++ IP + P Sbjct: 365 RVIRRPIPSMEPPS 378 >UniRef50_Q2PZC2 Vasa protein n=16 Tax=Neoptera RepID=Q2PZC2_APIME Length = 630 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 156/377 (41%), Positives = 234/377 (62%), Gaps = 12/377 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF++ GL +L + + GY++PTP+Q+ A+P ++ GRDLMA AQTG+GKTA F +P++ Sbjct: 197 SFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACAQTGSGKTAAFAVPIIN 256 Query: 62 HLITRQPH---AKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 L+ R + +I++PTREL QI + + +S ++++V +GG S+ Q Sbjct: 257 TLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNSILKTVVAYGGTSVMHQ 316 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTK-- 176 KL G +LVATPGRLLD + VK V+ LVLDEADRMLDMGF+ I +++ Sbjct: 317 RGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQFLVLDEADRMLDMGFLPSIEKMVDHET 376 Query: 177 -LP-AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRE 234 +P +RQ L+FSATF D+++ LA + L+N L + V A V Q+ + V + +K++ Sbjct: 377 MVPLGERQTLMFSATFPDEVQHLARRFLNNYLFLAVGIVGGACSDVEQNFYEVARNKKKD 436 Query: 235 LLSHMIGKGNW----QQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALAD 290 LL ++ + N LVF K A+ +A L+++ + +IHG++ Q R ALAD Sbjct: 437 LLKEILERENDSGTLGGTLVFVEMKKKADFIAVFLSENNYPTTSIHGDRLQRQREEALAD 496 Query: 291 FKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC 350 FKSG + +LVAT +AARGLDI+ + HV+NY+LP ++YVHRIGRTGR G A S Sbjct: 497 FKSGRMSILVATAVAARGLDIKNVSHVINYDLPKGIDEYVHRIGRTGRVGNRGRATSFFD 556 Query: 351 VDEHKLLR-DIEKLLKK 366 +E LR D+ ++LK+ Sbjct: 557 PEEDAPLRGDLVRILKQ 573 >UniRef50_C0AEG7 DEAD/DEAH box helicase domain protein (Fragment) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AEG7_9BACT Length = 606 Score = 541 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 141/381 (37%), Positives = 224/381 (58%), Gaps = 7/381 (1%) Query: 4 DSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHL 63 LGLSP++L+AV + G+ E +PIQ IP +L G D++ + TG+GKTA F LP ++ + Sbjct: 1 AELGLSPELLKAVDKMGFEEASPIQAAVIPLLLAGSDVVGQSSTGSGKTAAFALPAIERV 60 Query: 64 ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMKL 122 T+ + V+ LIL PTRELA Q+ E V + + + + ++GG S Q L Sbjct: 61 DTKL------KAVQVLILCPTRELAVQVAEEVNKLASFKRGVMEVPIYGGQSYERQFRAL 114 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 G V++ TPGR++D + +KLD++ +++LDE DRMLDMGF DI +L +P +RQ Sbjct: 115 AAGAQVVIGTPGRVMDHMERGTLKLDKLSMVILDECDRMLDMGFRDDIEHILKSVPEQRQ 174 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 +L FSAT +I+ + + + NP +++ + ++ QV Q VD++ K E+L+ +I Sbjct: 175 SLFFSATMPREIRDMISRFIPNPAWVKIETQMQSAPQVDQVYFEVDRRSKLEVLTRLIDL 234 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 +++ ++F TK + L E L+ G +HG+ +Q RTR + FK L+AT Sbjct: 235 NDFRYGIIFCSTKIMVDELDENLHARGYACDRLHGDITQAQRTRTMEKFKRRGFEFLIAT 294 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARGLD+++L V N++LPN EDY HRIGRTGRA G+A + V E L+ + + Sbjct: 295 DVAARGLDVDDLEVVFNFDLPNDAEDYTHRIGRTGRAGRKGKAFTFVSGRELWKLQSMVR 354 Query: 363 LLKKEIPRIAIPGYEPDPSIK 383 + +I R +P + + Sbjct: 355 FARLDIRRERVPSLDQVEEAR 375 >UniRef50_A4EAF2 Putative uncharacterized protein n=4 Tax=Collinsella RepID=A4EAF2_9ACTN Length = 749 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 189/470 (40%), Positives = 267/470 (56%), Gaps = 26/470 (5%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 FD LGLS ++LRA+ GY PTP+Q +IP VLEGRDL+A+AQTGTGKTA F LP + + Sbjct: 48 FDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEGRDLLAAAQTGTGKTAAFLLPTMNN 107 Query: 63 L-------------------ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN 103 L ++P GR PV L++TPTRELA QI E + Sbjct: 108 LEHIAPPKPVRERGGRNRRRGAKKPEGNGRGPV-MLVITPTRELAQQIDEVAGKIADVTG 166 Query: 104 IRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLD 163 ++ V GGVS PQ L+ G D+LVATPGRL+DL Q A LD+V++LVLDEADRMLD Sbjct: 167 HVAVTVVGGVSYKPQTAALKYGCDILVATPGRLVDLIEQGACHLDEVKVLVLDEADRMLD 226 Query: 164 MGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQH 223 MGF+ +RR++ + PA+RQ LLFSAT ++ L+ +P +E+A + +D V Q Sbjct: 227 MGFLPAVRRIVRETPAERQTLLFSATLDEEAVGEITDLVSDPARVEIAPATSTADTVDQF 286 Query: 224 VHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGA 283 V V + K LL + K ++ +VF RTKH A+ +L + GI++AAIHGN+SQ Sbjct: 287 VFPVSIEAKNNLLPEFLKKEGPERTIVFMRTKHRADSCCRRLERKGIKAAAIHGNRSQAQ 346 Query: 284 RTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATG 343 R RAL+ F+ G + VLVATD+ ARG+DI ++ +VVN+++P P DY+HRIGRTGRA G Sbjct: 347 RERALSAFRDGTVDVLVATDVLARGIDISDVRYVVNFDVPAEPTDYIHRIGRTGRAGELG 406 Query: 344 EALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNG----RQQRGGGGR 399 A++ V + +IEKL+ K P+ A + + ++ Sbjct: 407 WAITFVTEQDVDEFYEIEKLMDKTADIYDAGDLHVGPNPPAVDPERDPAAFKVKKKTKRG 466 Query: 400 GQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRK 449 + +Q RR A + +R G + G+ +R RP++ Sbjct: 467 KSKSKKKLEQARRDGKRNGDDYGDVAGRSNR--GCGERRGDGERPSRPKR 514 >UniRef50_Q553B1 ATP-dependent RNA helicase ddx46 n=1 Tax=Dictyostelium discoideum RepID=DDX46_DICDI Length = 1151 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 149/432 (34%), Positives = 239/432 (55%), Gaps = 18/432 (4%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 S+ GL+ + + + Y +PT IQ Q IPA++ GRDL+ A+TG+GKT F LP+ + Sbjct: 510 SWAQAGLTEKVHLLLKKFQYEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFR 569 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ + A G + ALI++PTRELA QI + +SK L +R+ V+GG SI+ Q+ + Sbjct: 570 HILAQPKSAPGEGMI-ALIMSPTRELALQIHVECKKFSKVLGLRTACVYGGASISEQIAE 628 Query: 122 LRGGVDVLVATPGRLLDLE---HQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ G D++V TPGR++D+ ++ L +V LVLDEADRM DMGF I ++ + Sbjct: 629 LKRGADIVVCTPGRMIDILCANNRRITNLRRVTFLVLDEADRMFDMGFGPQINCIVDSIR 688 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ ++FSATF ++ +A+K+L+ PLEI R+ S + Q V + + L Sbjct: 689 PDRQTIMFSATFPPKVENVAKKILNKPLEIIAGGRSIVSSDIEQFVEVRPTETRFRRLIE 748 Query: 239 MIGK-GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++ + Q+L+FT + ++L QL+ + ++HG+K Q R ++DFK+ Sbjct: 749 LLSIWYHKGQILIFTNRQETTDNLYRQLSNSQYQCLSLHGSKDQTDRDETISDFKNKVKT 808 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +L+AT +A+RGLDI++L VVN++ P+ EDYVHR+GRTGRA G A + + DE + Sbjct: 809 ILIATPLASRGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGRAGNRGTAYTFITPDEERFS 868 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGG-------GGRGQGGGRGQQQP 410 I K L++ ++ PD K +++ G G G+G + Sbjct: 869 SSIIKALEQSGSKV------PDELRKLNDTYEKKRKEGKDVLLAPTGFTGRGHKFDAAEE 922 Query: 411 RRGEGGAKSASA 422 + K Sbjct: 923 DKKNIERKQQRK 934 >UniRef50_C1D891 Putative ATP-dependent RNA helicase protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D891_LARHH Length = 520 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 181/455 (39%), Positives = 261/455 (57%), Gaps = 13/455 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +LGL ++ A+ + PTP+Q +A+P +L GRDLMASAQTGTGKTA F LP L Sbjct: 6 FAALGLDARLVHALEQHNITTPTPVQAEALPLLLSGRDLMASAQTGTGKTAAFLLPALSR 65 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYS-KYLNIRSLVVFGGVSINPQMMK 121 L+ +P A+ R P R L+L PTREL Q+ + +++S K + V GG S Q Sbjct: 66 LLV-EPVARSRGP-RILVLAPTRELVQQVAKAAQEFSTKIPRVNVASVIGGTSFRTQNQM 123 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L ++V+VATPGRL+D + ++E+LVLDEADRMLDMGF D+ + ++LP R Sbjct: 124 LTRPIEVMVATPGRLMDQMRSGRIDFSRLEMLVLDEADRMLDMGFSEDVMEIASQLPKAR 183 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLSHMI 240 Q F+AT + + A++LL P +IE+A + + + Q FVD KR L+ H++ Sbjct: 184 QTAFFTATMTRRVLDFADELLTEPAKIEIAAQTAKHENIEQQAIFVDDIDHKRRLVRHIL 243 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + +Q +VF TK + LA++L DGIR+ A+HG+ Q RTR L +SG VLV Sbjct: 244 SQPDVKQAIVFVATKRDCDTLADELIVDGIRADALHGDMQQRDRTRTLTRLRSGQTEVLV 303 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+D+ + HV+N++LP EDYVHR+GRTGRA ATG A+SLV + L+ I Sbjct: 304 ATDVAARGIDVAGISHVINFDLPRFAEDYVHRVGRTGRAGATGTAVSLVGRQDAFPLKKI 363 Query: 361 EKLLKKEIPRIAIPGY------EPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE 414 E+ +++ I G + G + R G G+G+ G PR G Sbjct: 364 ERFTGQKLIVTEIEGMIARFKPQERREGGGGRGGFGGKPRHGNGQGRSYGDRSSAPRGGF 423 Query: 415 GGAKSASAKPAEKPS---RRLGDAKPAGEQQRRRR 446 GG + ++ R+ GDA +G + RR Sbjct: 424 GGHQQRREGGDDRRQFAPRQDGDAHRSGTARDGRR 458 >UniRef50_Q9NXZ2 Probable ATP-dependent RNA helicase DDX43 n=23 Tax=Euteleostomi RepID=DDX43_HUMAN Length = 648 Score = 540 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 146/408 (35%), Positives = 236/408 (57%), Gaps = 6/408 (1%) Query: 2 SFDS-LGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +FD P+++ + + G+++PTPIQ QA P VL+G DL+ AQTGTGKT + +P Sbjct: 242 TFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGF 301 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 HL+ + R L+LTPTRELA Q+ YS Y +RS+ V+GG + + Q+ Sbjct: 302 IHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYS-YKGLRSVCVYGGGNRDEQIE 360 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L+ GVD+++ATPGRL DL+ N V L + LVLDEAD+MLDMGF I ++L + Sbjct: 361 ELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPD 420 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 RQ ++ SAT+ + LA+ L P+ + V + A V Q++ ++ K + Sbjct: 421 RQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTF 480 Query: 240 IGKGN-WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 + + +V+VF K A+HL+ L I ++HG++ Q R +AL +FK+G +R+ Sbjct: 481 LQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRI 540 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 L+ATD+A+RGLD+ ++ HV N++ P E+YVHRIGRTGRA TG +++ + ++ ++ Sbjct: 541 LIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVAS 600 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRG 406 ++ +L++ +IP + + + Q R+ R QG + Sbjct: 601 ELINILERA--NQSIPEELVSMAERFKAHQQKREMERKMERPQGRPKK 646 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P25888 ATP-dependent RNA helicase rhlE n=363 Tax=root R... 687 0.0 UniRef50_B3RIS6 Putative uncharacterized protein n=1 Tax=Trichop... 624 e-177 UniRef50_Q8MZI3 CG10077, isoform A n=15 Tax=Eukaryota RepID=Q8MZ... 624 e-177 UniRef50_C4ZJL9 DEAD/DEAH box helicase domain protein n=1 Tax=Th... 622 e-177 UniRef50_C5LBR0 RNA helicase, putative n=4 Tax=Perkinsus marinus... 620 e-176 UniRef50_Q92841 Probable ATP-dependent RNA helicase DDX17 n=25 T... 619 e-176 UniRef50_C8WWM6 DEAD/DEAH box helicase domain protein n=1 Tax=Al... 618 e-175 UniRef50_Q82T78 RhlE; ATP-dependent RNA helicase RhlE n=1 Tax=Ni... 617 e-175 UniRef50_P17844 Probable ATP-dependent RNA helicase DDX5 n=52 Ta... 615 e-174 UniRef50_P24782 ATP-dependent RNA helicase dbp2 n=63 Tax=Eukaryo... 614 e-174 UniRef50_C7PD17 DEAD/DEAH box helicase domain protein n=139 Tax=... 611 e-173 UniRef50_C4G990 Putative uncharacterized protein n=1 Tax=Shuttle... 610 e-173 UniRef50_P24783 ATP-dependent RNA helicase DBP2 n=131 Tax=Eukary... 610 e-173 UniRef50_Q2SZW4 ATP-dependent RNA helicase RhlE n=104 Tax=Proteo... 608 e-172 UniRef50_D2LSA7 DEAD/DEAH box helicase domain protein n=1 Tax=Ba... 605 e-172 UniRef50_Q5N7W4 DEAD-box ATP-dependent RNA helicase 30 n=3 Tax=O... 605 e-171 UniRef50_Q0AFH3 DEAD/DEAH box helicase domain protein n=1 Tax=Ni... 604 e-171 UniRef50_Q0HYG8 DEAD/DEAH box helicase domain protein n=78 Tax=B... 604 e-171 UniRef50_B0TII3 Dead/deah box helicase n=18 Tax=Bacteria RepID=B... 603 e-171 UniRef50_Q1ECV0 LOC556764 protein (Fragment) n=21 Tax=Eukaryota ... 602 e-171 UniRef50_D2RJY3 DEAD/DEAH box helicase domain protein n=2 Tax=Fi... 601 e-170 UniRef50_A3FQ59 Putative uncharacterized protein n=1 Tax=Cryptos... 600 e-170 UniRef50_Q126W4 DEAD/DEAH box helicase-like n=153 Tax=Bacteria R... 599 e-170 UniRef50_C1D673 RhlE3 n=1 Tax=Laribacter hongkongensis HLHK9 Rep... 599 e-170 UniRef50_D2QWU0 DEAD/DEAH box helicase domain protein n=1 Tax=Pi... 598 e-169 UniRef50_Q54CE0 Probable ATP-dependent RNA helicase ddx17 n=2 Ta... 598 e-169 UniRef50_A2SQE1 DEAD/DEAH box helicase domain protein n=17 Tax=c... 598 e-169 UniRef50_C5CU85 DEAD/DEAH box helicase domain protein n=10 Tax=C... 598 e-169 UniRef50_A2QC74 ATP-dependent RNA helicase dbp2 n=35 Tax=Eukaryo... 597 e-169 UniRef50_D2QGG1 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 597 e-169 UniRef50_Q5L3G9 DEAD-box ATP-dependent RNA helicase cshA n=94 Ta... 597 e-169 UniRef50_C4Q0V4 DEAD box ATP-dependent RNA helicase, putative n=... 595 e-168 UniRef50_Q81IT9 DEAD-box ATP-dependent RNA helicase cshA n=84 Ta... 594 e-168 UniRef50_A6M3F5 DEAD/DEAH box helicase domain protein n=5 Tax=Cl... 593 e-168 UniRef50_B7VQT9 ATP-dependent RNA helicase n=15 Tax=Bacteria Rep... 593 e-168 UniRef50_C6WW85 DEAD/DEAH box helicase domain protein n=1 Tax=Me... 593 e-168 UniRef50_A6T3R2 ATP-dependent RNA helicase n=86 Tax=Bacteria Rep... 592 e-168 UniRef50_C5TNR4 Dead/deah box helicase n=8 Tax=Neisseriaceae Rep... 592 e-168 UniRef50_B7PA03 ATP-dependent helicase (DEAD box), putative n=1 ... 592 e-167 UniRef50_Q24I45 DEAD/DEAH box helicase family protein n=2 Tax=Te... 589 e-167 UniRef50_C4XQY7 ATP-dependent RNA helicase n=7 Tax=Deltaproteoba... 589 e-167 UniRef50_Q65N62 DEAD-box ATP-dependent RNA helicase cshA n=135 T... 589 e-167 UniRef50_D0MZ17 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phy... 589 e-167 UniRef50_B4SPP3 DEAD/DEAH box helicase domain protein n=16 Tax=c... 589 e-167 UniRef50_Q17KA8 DEAD box ATP-dependent RNA helicase n=4 Tax=Euka... 588 e-166 UniRef50_C5RIK3 DEAD/DEAH box helicase domain protein n=3 Tax=Cl... 588 e-166 UniRef50_C9RPH4 DEAD/DEAH box helicase domain protein n=1 Tax=Fi... 588 e-166 UniRef50_A6VJ89 DEAD/DEAH box helicase domain protein n=5 Tax=Eu... 588 e-166 UniRef50_A9KIB7 DEAD/DEAH box helicase domain protein n=1 Tax=Cl... 588 e-166 UniRef50_Q0ST49 ATP-dependent RNA helicase, DEAD/DEAH box family... 587 e-166 UniRef50_D2MPZ3 Putative ATP-dependent RNA helicase RhlE n=1 Tax... 587 e-166 UniRef50_B1VFV5 ATP-dependent RNA helicase n=35 Tax=cellular org... 587 e-166 UniRef50_C4Q2M5 DEAD box ATP-dependent RNA helicase, putative n=... 587 e-166 UniRef50_A8SKI7 Putative uncharacterized protein n=1 Tax=Parvimo... 587 e-166 UniRef50_C6VX00 DEAD/DEAH box helicase domain protein n=1 Tax=Dy... 586 e-166 UniRef50_B0SEU1 Superfamily II DNA and RNA helicase n=5 Tax=cell... 586 e-166 UniRef50_Q0D1K3 Pre-mRNA-processing ATP-dependent RNA helicase p... 586 e-166 UniRef50_Q0AVQ9 ATP-dependent RNA helicase n=1 Tax=Syntrophomona... 586 e-166 UniRef50_D1INE6 Whole genome shotgun sequence of line PN40024, s... 585 e-165 UniRef50_B8ILJ8 DEAD/DEAH box helicase domain protein n=10 Tax=A... 584 e-165 UniRef50_O97032 DjVLGB (Fragment) n=1 Tax=Dugesia japonica RepID... 583 e-165 UniRef50_A7IK90 DEAD/DEAH box helicase domain protein n=36 Tax=A... 583 e-165 UniRef50_C5EJJ1 DEAD/DEAH box helicase domain-containing protein... 583 e-165 UniRef50_C1IBN1 DEAD-box ATP dependent DNA helicase n=1 Tax=Clos... 583 e-165 UniRef50_Q4TVV3 Probable ATP-dependent RNA helicase DDX46 n=18 T... 583 e-165 UniRef50_P19109 ATP-dependent RNA helicase p62 n=11 Tax=Eukaryot... 582 e-165 UniRef50_Q5JKF2 DEAD-box ATP-dependent RNA helicase 40 n=11 Tax=... 582 e-165 UniRef50_D2L498 DEAD/DEAH box helicase domain protein n=1 Tax=De... 582 e-165 UniRef50_Q9SQV1 DEAD-box ATP-dependent RNA helicase 40 n=14 Tax=... 582 e-165 UniRef50_B2V9H9 DEAD/DEAH box helicase domain protein n=4 Tax=Hy... 582 e-165 UniRef50_B3L9V8 Helicase, putative n=6 Tax=Alveolata RepID=B3L9V... 582 e-164 UniRef50_C4QFR3 DEAD box ATP-dependent RNA helicase, putative n=... 581 e-164 UniRef50_A5UZK3 DEAD/DEAH box helicase domain protein n=8 Tax=Ba... 581 e-164 UniRef50_C8WFI7 DEAD/DEAH box helicase domain protein n=3 Tax=Zy... 581 e-164 UniRef50_P24346 Putative ATP-dependent RNA helicase an3 n=63 Tax... 581 e-164 UniRef50_A9GRX1 DeaD2 protein n=5 Tax=Bacteria RepID=A9GRX1_SORC5 581 e-164 UniRef50_B4WCQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Br... 581 e-164 UniRef50_D2QD85 DEAD/DEAH box helicase domain protein n=1 Tax=Sp... 581 e-164 UniRef50_C5SI45 DEAD/DEAH box helicase domain protein n=1 Tax=As... 581 e-164 UniRef50_C4LJP9 ATP-dependent RNA helicase n=15 Tax=Bacteria Rep... 581 e-164 UniRef50_B9Y818 Putative uncharacterized protein n=1 Tax=Holdema... 580 e-164 UniRef50_O00571 ATP-dependent RNA helicase DDX3X n=262 Tax=cellu... 579 e-164 UniRef50_C8P265 DEAD/DEAH family ATP-dependent RNA helicase n=1 ... 579 e-164 UniRef50_UPI00006CD03A P68-like protein, putative n=1 Tax=Tetrah... 579 e-164 UniRef50_Q5CQW8 Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+H... 579 e-164 UniRef50_C5CGQ2 DEAD/DEAH box helicase domain protein n=1 Tax=Ko... 578 e-163 UniRef50_A0RP33 Putative ATP-dependent RNA helicase RhlE n=2 Tax... 577 e-163 UniRef50_D1I3Q7 Whole genome shotgun sequence of line PN40024, s... 577 e-163 UniRef50_D2NRF7 Superfamily II DNA and RNA helicase n=3 Tax=Bact... 577 e-163 UniRef50_A9NFK0 ATP-dependent RNA helicase, superfamily II n=1 T... 577 e-163 UniRef50_C7JBN9 DNA/RNA helicase n=19 Tax=cellular organisms Rep... 577 e-163 UniRef50_Q1AG34 Ded1-like DEAD-box RNA helicase n=3 Tax=Coelomat... 576 e-163 UniRef50_Q2NEZ7 Predicted helicase n=20 Tax=cellular organisms R... 576 e-163 UniRef50_B6K0K2 ATP-dependent RNA helicase Prp11 n=1 Tax=Schizos... 576 e-163 UniRef50_Q86XP3 ATP-dependent RNA helicase DDX42 n=64 Tax=Eukary... 576 e-163 UniRef50_B7EQA6 cDNA clone:J023079L21, full insert sequence n=5 ... 575 e-162 UniRef50_B5EAF1 DEAD/DEAH box helicase domain protein n=3 Tax=De... 575 e-162 UniRef50_Q9VXW2 CG6227 n=20 Tax=Endopterygota RepID=Q9VXW2_DROME 574 e-162 UniRef50_B3QTY3 DEAD/DEAH box helicase domain protein n=1 Tax=Ch... 574 e-162 UniRef50_A9M0D7 ATP-dependent RNA helicase, putative n=21 Tax=Ne... 574 e-162 UniRef50_Q2BP56 Putative ATP-dependent RNA helicase n=1 Tax=Nept... 574 e-162 UniRef50_C8WL27 DEAD/DEAH box helicase domain protein n=3 Tax=Eg... 573 e-162 UniRef50_C6XMJ7 DEAD/DEAH box helicase domain protein n=23 Tax=B... 573 e-162 UniRef50_Q9M2F9 DEAD-box ATP-dependent RNA helicase 52 n=13 Tax=... 573 e-162 UniRef50_B3M5L4 GF23818 n=1 Tax=Drosophila ananassae RepID=B3M5L... 572 e-162 UniRef50_Q46G62 ATP-dependent RNA helicase n=7 Tax=cellular orga... 572 e-162 UniRef50_C0Q9A4 DeaD n=1 Tax=Desulfobacterium autotrophicum HRM2... 572 e-161 UniRef50_Q7UG20 ATP-dependent RNA helicase n=2 Tax=Bacteria RepI... 572 e-161 UniRef50_Q65XX1 Vasa-and belle-like helicase protein 1, isoform ... 572 e-161 UniRef50_B6R5V0 ATP-dependent rna helicase, dead/deah box family... 572 e-161 UniRef50_B7P029 Vasa n=9 Tax=Coelomata RepID=B7P029_9BIVA 571 e-161 UniRef50_P0A9P7 Cold-shock DEAD box protein A n=201 Tax=Bacteria... 571 e-161 UniRef50_C4QME8 DEAD box ATP-dependent RNA helicase, putative n=... 571 e-161 UniRef50_C6ATS7 DEAD/DEAH box helicase domain protein n=15 Tax=A... 571 e-161 UniRef50_C6C1F3 DEAD/DEAH box helicase domain protein n=2 Tax=De... 570 e-161 UniRef50_A7K2L3 ATP-dependent RNA helicase n=17 Tax=Vibrionaceae... 570 e-161 UniRef50_Q3AZR1 DEAD/DEAH box helicase-like n=2 Tax=Synechococcu... 570 e-161 UniRef50_D2LXV0 DEAD/DEAH box helicase domain protein n=1 Tax=Ba... 570 e-161 UniRef50_A2EVI2 DEAD/DEAH box helicase family protein n=1 Tax=Tr... 569 e-161 UniRef50_B9SM44 Dead box ATP-dependent RNA helicase, putative n=... 569 e-161 UniRef50_C4V8Q7 Putative uncharacterized protein n=1 Tax=Nosema ... 569 e-161 UniRef50_Q04VV9 ATP-dependent RNA helicase (Superfamily II) n=4 ... 569 e-161 UniRef50_B6BTD3 Dead/deah box helicase domain protein n=1 Tax=be... 569 e-161 UniRef50_Q4PFD9 Pre-mRNA-processing ATP-dependent RNA helicase P... 569 e-160 UniRef50_A3EUK2 Putative ATP-dependent helicase n=2 Tax=Leptospi... 568 e-160 UniRef50_Q3SF48 DEAD/DEAH box helicase n=7 Tax=cellular organism... 568 e-160 UniRef50_Q11UP8 ATP-dependent RNA helicase (Cold-shock DEAD-box ... 568 e-160 UniRef50_A7HKQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Fe... 568 e-160 UniRef50_Q9P7C7 Pre-mRNA-processing ATP-dependent RNA helicase p... 567 e-160 UniRef50_Q1MY97 DEAD/DEAH box helicase-like protein n=1 Tax=Berm... 567 e-160 UniRef50_UPI000186EE68 DEAD box ATP-dependent RNA helicase, puta... 567 e-160 UniRef50_A8WWC4 C. briggsae CBR-VBH-1 protein n=2 Tax=Caenorhabd... 567 e-160 UniRef50_D2V713 ATP-dependent RNA helicase n=1 Tax=Naegleria gru... 567 e-160 UniRef50_A8IAJ3 Helicase n=4 Tax=Alphaproteobacteria RepID=A8IAJ... 567 e-160 UniRef50_Q2NB74 DNA and RNA helicase n=7 Tax=Alphaproteobacteria... 567 e-160 UniRef50_C7MN05 DNA/RNA helicase, superfamily II n=1 Tax=Cryptob... 567 e-160 UniRef50_D1B4W7 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 567 e-160 UniRef50_B8FPB9 DEAD/DEAH box helicase domain protein n=12 Tax=B... 567 e-160 UniRef50_A0Z0M4 ATP-dependent RNA helicase n=1 Tax=marine gamma ... 567 e-160 UniRef50_Q6AMK6 Probable ATP-dependent RNA helicase n=1 Tax=Desu... 567 e-160 UniRef50_A6RW79 Pre-mRNA-processing ATP-dependent RNA helicase p... 567 e-160 UniRef50_B8J1L5 DEAD/DEAH box helicase domain protein n=3 Tax=Ba... 567 e-160 UniRef50_C6HUU6 Putative ATP-dependent helicase n=1 Tax=Leptospi... 566 e-160 UniRef50_C6E4K1 DEAD/DEAH box helicase domain protein n=9 Tax=Pr... 566 e-160 UniRef50_B7QFN5 ATP-dependent RNA helicase, putative n=1 Tax=Ixo... 566 e-160 UniRef50_Q0G0P8 Superfamily II DNA and RNA helicase n=1 Tax=Fulv... 566 e-160 UniRef50_C7RHZ9 DEAD/DEAH box helicase domain protein n=3 Tax=An... 566 e-160 UniRef50_Q8SRB2 ATP-dependent RNA helicase DBP2 n=18 Tax=Fungi/M... 565 e-159 UniRef50_Q2RQT0 DEAD/DEAH box helicase n=59 Tax=root RepID=Q2RQT... 565 e-159 UniRef50_Q0BSI7 ATP-dependent RNA helicase n=54 Tax=Alphaproteob... 564 e-159 UniRef50_A3WBD4 DNA and RNA helicase n=1 Tax=Erythrobacter sp. N... 564 e-159 UniRef50_A8REA9 Putative uncharacterized protein n=1 Tax=Eubacte... 564 e-159 UniRef50_UPI00019259AA PREDICTED: similar to DEAD (Asp-Glu-Ala-A... 564 e-159 UniRef50_UPI00016C5336 ATP-dependent RNA helicase n=1 Tax=Gemmat... 564 e-159 UniRef50_B4N414 GK13754 n=2 Tax=Bilateria RepID=B4N414_DROWI 564 e-159 UniRef50_B8A609 Novel protein similar to vertebrate DEAD (Asp-Gl... 563 e-159 UniRef50_Q553B1 ATP-dependent RNA helicase ddx46 n=1 Tax=Dictyos... 563 e-159 UniRef50_Q5ZT20 ATP-dependent RNA helicase n=4 Tax=Legionella pn... 563 e-159 UniRef50_A6TTG0 DEAD/DEAH box helicase domain protein n=28 Tax=F... 563 e-159 UniRef50_Q5NZY2 ATP-dependent RNA helicase DeaD n=12 Tax=Bacteri... 563 e-159 UniRef50_Q8H0U8 DEAD-box ATP-dependent RNA helicase 42 n=11 Tax=... 563 e-159 UniRef50_Q9VHP0 ATP-dependent RNA helicase bel n=13 Tax=Eukaryot... 562 e-159 UniRef50_C7HXF4 DEAD/DEAH box helicase domain protein n=3 Tax=Ba... 562 e-159 UniRef50_Q485D3 ATP-dependent RNA helicase, DEAD box family n=24... 562 e-159 UniRef50_Q31AC4 DEAD/DEAH box helicase-like protein n=9 Tax=Proc... 562 e-158 UniRef50_C4R557 RNA helicase in the DEAD-box family, necessary f... 562 e-158 UniRef50_C5PZD1 ATP-dependent RNA helicase n=5 Tax=Bacillales Re... 562 e-158 UniRef50_B4MZE1 GK18312 n=1 Tax=Drosophila willistoni RepID=B4MZ... 561 e-158 UniRef50_A5G1U8 DEAD/DEAH box helicase domain protein n=7 Tax=Al... 561 e-158 UniRef50_P42305 ATP-dependent RNA helicase dbpA n=99 Tax=Firmicu... 561 e-158 UniRef50_Q12QV2 DEAD/DEAH box helicase-like protein n=27 Tax=Gam... 561 e-158 UniRef50_B9SW84 Dead box ATP-dependent RNA helicase, putative n=... 561 e-158 UniRef50_B2UL73 DEAD/DEAH box helicase domain protein n=1 Tax=Ak... 561 e-158 UniRef50_B9ETM9 Putative uncharacterized protein n=2 Tax=Oryza s... 561 e-158 UniRef50_UPI0000E87E35 putative ATP-dependent RNA helicase prote... 560 e-158 UniRef50_C5KR89 RNA helicase, putative n=3 Tax=Perkinsus marinus... 560 e-158 UniRef50_B9SAJ6 Dead box ATP-dependent RNA helicase, putative n=... 560 e-158 UniRef50_Q0W8H7 ATP-dependent RNA helicase n=1 Tax=uncultured me... 560 e-158 UniRef50_C6Q9Z2 DEAD/DEAH box helicase domain protein n=1 Tax=Hy... 560 e-158 UniRef50_Q9NXZ2 Probable ATP-dependent RNA helicase DDX43 n=23 T... 560 e-158 UniRef50_Q3IJ60 ATP-dependent RNA helicase, cold shock protein A... 560 e-158 UniRef50_P44586 Cold-shock DEAD box protein A homolog n=29 Tax=P... 559 e-158 UniRef50_O97031 DjVLGA n=1 Tax=Dugesia japonica RepID=O97031_DUGJA 559 e-158 UniRef50_D2QY81 DEAD/DEAH box helicase domain protein n=1 Tax=Pi... 559 e-158 UniRef50_C0W1P0 Superfamily II helicase n=2 Tax=Actinomyces RepI... 559 e-158 UniRef50_Q4FSS4 Possible ATP-dependent DEAD/DEAH box RNA-helicas... 559 e-158 UniRef50_Q11039 Cold-shock DEAD box protein A homolog n=27 Tax=B... 558 e-157 UniRef50_Q7NHM7 Gll2508 protein n=1 Tax=Gloeobacter violaceus Re... 558 e-157 UniRef50_C7LND0 DEAD/DEAH box helicase domain protein n=1 Tax=De... 558 e-157 UniRef50_Q9GNP1 Vasa homolog n=25 Tax=Eumetazoa RepID=Q9GNP1_CIOSA 558 e-157 UniRef50_C4LZM8 DEAD/DEAH box helicase, putative n=4 Tax=Entamoe... 557 e-157 UniRef50_Q3AX69 DEAD/DEAH box helicase-like n=18 Tax=cellular or... 557 e-157 UniRef50_UPI000192615D PREDICTED: similar to DEAD (Asp-Glu-Ala-A... 557 e-157 UniRef50_Q54QS3 Probable ATP-dependent RNA helicase ddx3 n=3 Tax... 557 e-157 UniRef50_A5FST0 DEAD/DEAH box helicase domain protein n=5 Tax=De... 557 e-157 UniRef50_B8I5B1 DEAD/DEAH box helicase domain protein n=2 Tax=Cl... 557 e-157 UniRef50_B0SU57 ATP-dependent RNA helicase, DEAD-box family (Dea... 557 e-157 UniRef50_C0EAN9 Putative uncharacterized protein n=1 Tax=Clostri... 557 e-157 UniRef50_B7S475 Predicted protein n=2 Tax=Bacillariophyta RepID=... 557 e-157 UniRef50_UPI00015B57D6 PREDICTED: similar to DEAD box ATP-depend... 557 e-157 UniRef50_UPI000186EE69 DEAD box ATP-dependent RNA helicase, puta... 557 e-157 UniRef50_Q8D2Y1 DeaD protein n=2 Tax=Enterobacteriaceae RepID=Q8... 556 e-157 UniRef50_Q7K4L8 LD33749p n=15 Tax=Bilateria RepID=Q7K4L8_DROME 556 e-157 UniRef50_B0TQ71 DEAD/DEAH box helicase domain protein n=31 Tax=G... 556 e-157 UniRef50_Q965K2 Putative uncharacterized protein n=3 Tax=Caenorh... 556 e-157 UniRef50_Q7UJ92 Putative ATP-dependent RNA helicase rhlE n=1 Tax... 556 e-157 UniRef50_C3RH47 ATP-dependent RNA helicase RhlE n=2 Tax=Bacteria... 556 e-157 UniRef50_A6DIU5 Probable ATP dependent RNA helicase n=1 Tax=Lent... 556 e-157 UniRef50_D1IXE3 Whole genome shotgun sequence of line PN40024, s... 555 e-156 UniRef50_A8TFK3 DEAD/DEAH box helicase domain protein n=1 Tax=Me... 555 e-156 UniRef50_A8P4I3 ATP-dependent RNA helicase An3, putative n=2 Tax... 555 e-156 UniRef50_UPI0001C33831 DNA/RNA helicase, superfamily II n=3 Tax=... 555 e-156 UniRef50_Q725W5 ATP-dependent RNA helicase, DEAD/DEAH family n=3... 555 e-156 UniRef50_Q8YXJ0 ATP-dependent RNA helicase n=24 Tax=Cyanobacteri... 555 e-156 UniRef50_Q2PZC2 Vasa protein n=16 Tax=Neoptera RepID=Q2PZC2_APIME 555 e-156 UniRef50_D1H3Q8 Whole genome shotgun sequence of line PN40024, s... 554 e-156 UniRef50_C9DQK7 VASA DEAD-box protein n=5 Tax=Chordata RepID=C9D... 554 e-156 UniRef50_Q0K893 ATP-dependent RNA helicase n=129 Tax=Proteobacte... 554 e-156 UniRef50_C9RIQ5 DEAD/DEAH box helicase domain protein n=1 Tax=Fi... 554 e-156 UniRef50_A9ENG9 ATP-independent RNA helicase n=18 Tax=Bacteria R... 554 e-156 UniRef50_Q10MH8 DEAD-box ATP-dependent RNA helicase 24 n=10 Tax=... 554 e-156 UniRef50_A9NFC3 DEAD box ATP-dependent RNA helicase n=1 Tax=Acho... 553 e-156 UniRef50_C1AE59 ATP-dependent RNA helicase RhlE n=1 Tax=Gemmatim... 553 e-156 UniRef50_Q17W71 ATP-dependent RNA helicase n=19 Tax=Helicobacter... 552 e-156 UniRef50_Q15T34 DEAD/DEAH box helicase-like n=1 Tax=Pseudoaltero... 552 e-156 UniRef50_B6IS62 DEAD/DEAH box helicase protein n=1 Tax=Rhodospir... 552 e-156 UniRef50_B0U160 DEAD-box subfamily ATP-dependent helicase n=18 T... 552 e-156 UniRef50_Q3AFI3 ATP-dependent RNA helicase, DEAD box family n=1 ... 552 e-156 UniRef50_C0ZI64 Putative ATP-dependent RNA helicase n=1 Tax=Brev... 552 e-155 UniRef50_Q5HME0 Probable DEAD-box ATP-dependent RNA helicase SER... 552 e-155 UniRef50_A8QAF6 Putative uncharacterized protein n=1 Tax=Malasse... 552 e-155 UniRef50_B0SYC6 DEAD/DEAH box helicase domain protein n=33 Tax=A... 552 e-155 UniRef50_B6YWR7 DEAD/DEAH box RNA helicase n=3 Tax=Thermococcus ... 552 e-155 UniRef50_A9BJS7 DEAD/DEAH box helicase domain protein n=2 Tax=ce... 551 e-155 UniRef50_A6KZW9 ATP-dependent RNA helicase n=51 Tax=Bacteria Rep... 551 e-155 UniRef50_B4PSL1 GE25850 n=3 Tax=Sophophora RepID=B4PSL1_DROYA 551 e-155 UniRef50_A2ED04 DEAD/DEAH box helicase family protein n=1 Tax=Tr... 551 e-155 UniRef50_C8PWG8 Cold-shock DEAD box protein A homolog n=1 Tax=En... 551 e-155 UniRef50_D1B384 DEAD/DEAH box helicase domain protein n=1 Tax=Su... 551 e-155 UniRef50_UPI0001C311D7 DEAD/DEAH box helicase domain protein n=1... 551 e-155 UniRef50_A1B2U6 DEAD/DEAH box helicase domain protein n=23 Tax=R... 551 e-155 UniRef50_Q26696 Putative DEAD-box RNA helicase HEL64 n=7 Tax=Try... 551 e-155 UniRef50_A0KXT6 DEAD/DEAH box helicase domain protein n=61 Tax=G... 550 e-155 UniRef50_Q9NQI0 Probable ATP-dependent RNA helicase DDX4 n=53 Ta... 550 e-155 UniRef50_O22907 DEAD-box ATP-dependent RNA helicase 24 n=4 Tax=E... 550 e-155 UniRef50_A7VM16 Vasa-related protein n=5 Tax=Eumetazoa RepID=A7V... 549 e-155 UniRef50_A4BET4 DEAD/DEAH box helicase-like protein n=1 Tax=Rein... 549 e-155 UniRef50_Q388E8 ATP-dependent DEAD/H RNA helicase, putative n=4 ... 549 e-155 UniRef50_Q30PP0 DEAD/DEAH box helicase-like protein n=11 Tax=Bac... 549 e-155 UniRef50_A2U4F0 DEAD/DEAH box helicase n=4 Tax=Flavobacteriales ... 548 e-154 Sequences not found previously or not previously below threshold: >UniRef50_P25888 ATP-dependent RNA helicase rhlE n=363 Tax=root RepID=RHLE_ECOLI Length = 454 Score = 687 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 454/454 (100%), Positives = 454/454 (100%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL Sbjct: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM Sbjct: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK Sbjct: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI Sbjct: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV Sbjct: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI Sbjct: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA Sbjct: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 Query: 421 SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ Sbjct: 421 SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 >UniRef50_B3RIS6 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RIS6_TRIAD Length = 654 Score = 624 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 150/437 (34%), Positives = 233/437 (53%), Gaps = 5/437 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF ++ + QG++ PTPIQ Q+ P L GRD++ AQTG+GKT + LP + Sbjct: 79 LSFSEASFPDYVMSEINNQGFKLPTPIQAQSWPVGLSGRDVVGIAQTGSGKTLAYVLPSI 138 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + P G P+ ALIL PTRELA Q+ + + I ++GG PQ+ Sbjct: 139 IHIKNQPPLRHGDGPI-ALILCPTRELAQQVHSVSTTFGRLARINCACIYGGSPKGPQLR 197 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L GV++ VATPGRLLD L++ LVLDEADRMLDMGF I++++ + Sbjct: 198 ELSRGVEICVATPGRLLDFLESRRTNLNRCSYLVLDEADRMLDMGFEPQIKQIIGSIKCP 257 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 RQ +++SAT+ +I+ LA + L + ++I + + T + + Q V ++ K + L + Sbjct: 258 RQTVMWSATWPKEIRTLAREFLRDYVQINIGSSDLTTNHNIKQIVEVCREEEKEDKLCKL 317 Query: 240 IG---KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 + + + ++ +VF TK +++L+ +L + G IHG+K Q R R L++F+SG I Sbjct: 318 LSDILRQDEKKTIVFVETKKKSDYLSRRLVRSGWPVLCIHGDKCQSERDRVLSEFRSGRI 377 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 VL+ATD+AARGLDI ++ V+NY+ PN EDYVHRIGRT R+ TG A + + Sbjct: 378 PVLIATDVAARGLDISDVKLVINYDFPNNSEDYVHRIGRTARSGKTGTAYTFFTASNIRQ 437 Query: 357 LRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 ++ LL++ I + + +AE Q R + G R R Sbjct: 438 SPNLIALLREANQPINPDLIQLGDAARAEMAQKHRGKMRGRDRFYNRDRNASNRYPYAKS 497 Query: 417 AKSASAKPAEKPSRRLG 433 S S + G Sbjct: 498 KLSGSYNSYGMNNSHGG 514 >UniRef50_Q8MZI3 CG10077, isoform A n=15 Tax=Eukaryota RepID=Q8MZI3_DROME Length = 818 Score = 624 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 151/457 (33%), Positives = 242/457 (52%), Gaps = 6/457 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F+ G ++ + +QG+ +PT IQ Q P + GRDL+ AQTG+GKT + LP + Sbjct: 157 IEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAV 216 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + +G P+ AL+L PTRELA QI + ++ ++R+ +FGG Q Sbjct: 217 VHINNQPRLERGDGPI-ALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQAR 275 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GV++++ATPGRL+D + L + LVLDEADRMLDMGF IR+++ ++ Sbjct: 276 DLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPD 335 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 RQ L++SAT+ +++ LAE+ L+N +++ + + +A+ + Q V D+ K L + Sbjct: 336 RQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKL 395 Query: 240 IGK---GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 + N + ++F TK + + +++ G R+ AIHG+KSQ R L+ F++G Sbjct: 396 LTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRH 455 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 +LVATD+AARGLD++++ V+NY+ P+ EDYVHRIGRTGR+ TG A +L Sbjct: 456 SILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANK 515 Query: 357 LRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 D+ ++L++ I + G GG G G Q G Sbjct: 516 ANDLIQVLREANQTINPKLMNMAMNGGYNKRGGGMGGGYRGGNGYQGRNPQMGGGYNGGN 575 Query: 417 AKSASAKPAEKPSRRLGDAKPAGEQQR-RRRPRKPAA 452 + P +R + AG R ++PR Sbjct: 576 NYRNNNGPGATMNRNSFNGGSAGGPPRFDQKPRTSPP 612 >UniRef50_C4ZJL9 DEAD/DEAH box helicase domain protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZJL9_THASP Length = 545 Score = 622 bits (1606), Expect = e-177, Method: Composition-based stats. Identities = 232/461 (50%), Positives = 300/461 (65%), Gaps = 11/461 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF LGL P++L+AV + GY EPTPIQ+QAIP V+ G+D+M AQTGTGKTAGFTLPLL Sbjct: 1 MSFADLGLIPELLQAVTDAGYTEPTPIQRQAIPIVIAGKDVMGGAQTGTGKTAGFTLPLL 60 Query: 61 QHLI--TRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 + + R RALIL PTRELA Q+ E+V+ YSK+L +RS+ V+GGV I PQ Sbjct: 61 HRIARHANTSTSPARHQTRALILAPTRELAMQVFESVKTYSKHLPLRSVCVYGGVDIRPQ 120 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 +LR G+++++ATPGRLLD Q ++ L QVE+LVLDEADRMLDMGFI DI+R+L LP Sbjct: 121 QAELRRGIEIVIATPGRLLDHLEQKSINLSQVEVLVLDEADRMLDMGFIPDIKRILALLP 180 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 +RQ+LLFSATFSD+IK LA+++L P IEVARRN S+ +T VH V KR LL+H Sbjct: 181 KQRQSLLFSATFSDEIKRLADQMLKEPQLIEVARRNMVSETITHVVHPVSSGMKRNLLAH 240 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ Q LVF TK LA L + GI + AIHG+K Q RT L FKSG +RV Sbjct: 241 LLRHKPDTQALVFVDTKLMCGRLAHYLERSGISADAIHGDKGQQQRTDTLEAFKSGKLRV 300 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLDI+ELP V+N+ELP+ EDYVHRIGRTGRA G A+SLV +E L Sbjct: 301 LVATDVAARGLDIDELPFVINFELPHTAEDYVHRIGRTGRAGHHGYAISLVSSEEKHWLS 360 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRG---------GGGRGQGGGRGQQQ 409 +IEKL+K +IP+ +PG++PDP + R +R + GGR + Sbjct: 361 EIEKLIKLQIPQERVPGFDPDPDFHEAGSRGHRGRRPAAAAADTEAQAPAARSGGRERGV 420 Query: 410 PRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKP 450 R E + A + + R G + A + +P +P Sbjct: 421 ERSAEARREPAREREGLRAGPRRGRSSVAADGFDFSKPYEP 461 >UniRef50_C5LBR0 RNA helicase, putative n=4 Tax=Perkinsus marinus ATCC 50983 RepID=C5LBR0_9ALVE Length = 674 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 149/412 (36%), Positives = 227/412 (55%), Gaps = 10/412 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD L IL+ + G+ +PTPIQ Q P L GRD++ A+TG+GKT F +P + Sbjct: 213 TFDEACLPDYILKEINRAGFEKPTPIQVQGWPVALSGRDMVGIAETGSGKTLAFMIPAVI 272 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + KG P+ LIL PTRELA QI + + I + V+GG PQ Sbjct: 273 HINAQPYLQKGDGPI-VLILAPTRELALQIKAECDRFGRSSRITNTCVYGGTQRGPQARA 331 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV++ +ATPGRL+D L +V LV+DEADRMLDMGF +R++++++ R Sbjct: 332 LQNGVEICIATPGRLIDFLESGTTNLKRVTYLVMDEADRMLDMGFEPQVRKIVSQIRPDR 391 Query: 182 QNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q L++SAT+ +++ LA + + P+ + V R A + Q+V V+ K E L ++ Sbjct: 392 QTLMWSATWPKEVQHLARDICNEEPVLVTVGRSGHACHNIQQYVEVVENNVKPERLLALM 451 Query: 241 GKGN-------WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKS 293 + + L+F TK GA+ + L +DG + +IHG+K Q R L FK+ Sbjct: 452 QAASAATGGGWTAKTLIFCDTKRGADDITRLLRRDGWPALSIHGDKKQSERDWVLNQFKT 511 Query: 294 GDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDE 353 G +++ATD+A+RGLD++++ +V+NY+ P EDYVHRIGRTGRA A+G A S D+ Sbjct: 512 GRSAIMIATDVASRGLDVKDVKYVINYDFPGTIEDYVHRIGRTGRAGASGVAYSFFSPDK 571 Query: 354 HKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGR 405 KL R + L++ + E G+ + G G+G G Sbjct: 572 GKLARQLVNCLREANQSVP-EALETIAFANDRSNSGGKGRGKGNYGGKGRGF 622 >UniRef50_Q92841 Probable ATP-dependent RNA helicase DDX17 n=25 Tax=Bilateria RepID=DDX17_HUMAN Length = 650 Score = 619 bits (1598), Expect = e-176, Method: Composition-based stats. Identities = 145/447 (32%), Positives = 230/447 (51%), Gaps = 11/447 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F ++ + +Q + EPTPIQ Q P L GRD++ AQTG+GKT + LP + H Sbjct: 94 FHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVH 153 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + + +G P+ L+L PTRELA Q+ + DY K ++S ++GG PQ+ L Sbjct: 154 INHQPYLERGDGPI-CLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDL 212 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 GV++ +ATPGRL+D L + LVLDEADRMLDMGF IR+++ ++ RQ Sbjct: 213 ERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQ 272 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMIG 241 L++SAT+ +++ LAE L + +I V +A+ + Q V + K L ++ Sbjct: 273 TLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLME 332 Query: 242 K---GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 + + ++F TK + L ++ +DG + IHG+KSQ R L +F+SG + Sbjct: 333 EIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPI 392 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 L+ATD+A+RGLD+E++ V+NY+ PN EDYVHRIGRT R+ G A + K R Sbjct: 393 LIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAR 452 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGR------GQQQPRR 412 ++ K+L++ I + GR + ++ Sbjct: 453 ELIKVLEEANQAINPKLMQLVDHRGGGGGGGGRSRYRTTSSANNPNLMYQDECDRRLRGV 512 Query: 413 GEGGAKSASAKPAEKPSRRLGDAKPAG 439 +GG + +++ + R G A +G Sbjct: 513 KDGGRRDSASYRDRSETDRAGYANGSG 539 >UniRef50_C8WWM6 DEAD/DEAH box helicase domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WWM6_ALIAD Length = 541 Score = 618 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 167/389 (42%), Positives = 249/389 (64%), Gaps = 7/389 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF+S GL+ +L+A+ + G+ EP+PIQ IP VLEGRD++ AQTGTGKTA F +PL++ Sbjct: 18 SFESFGLNRRVLQAIHDMGFEEPSPIQAACIPVVLEGRDVIGQAQTGTGKTAAFGIPLVE 77 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + T V+A++LTPTRELA Q+ +R +KY +RS+ ++GG SI Q+ Sbjct: 78 RVSTEPR-------VQAIVLTPTRELAIQVAGEIRKIAKYKRVRSVPIYGGQSIVHQIRA 130 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV +++ TPGR+LD H+ + L V ++VLDEAD MLDMGFI DI +L + P+ R Sbjct: 131 LKQGVQIVIGTPGRVLDHIHRGTLSLSDVRMVVLDEADEMLDMGFIDDIEAILRETPSDR 190 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q +LFSATF +++K LA + + +P I V R Q+ Q + V ++ K + L ++ Sbjct: 191 QTMLFSATFPNEVKRLALRYMRDPQHITVNRGEVTVPQIDQVCYKVLERNKLDSLCRIVD 250 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + Q ++F RTK G + L E L G + +HG+ SQ R R + F+ +I +LVA Sbjct: 251 SEDIQLGIIFCRTKRGVDDLVEALLARGYLADGLHGDLSQAQRDRVMRKFRKNEIELLVA 310 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD++++ HV+NY++P PE YVHRIGRTGRA G A++LV E+KLL+ IE Sbjct: 311 TDVAARGLDVDDVTHVINYDVPQDPESYVHRIGRTGRAGKRGLAITLVTPREYKLLKQIE 370 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 + +K++I +P E +AE ++ Sbjct: 371 REIKQKITVREVPSLEDVAERQAEMWRSK 399 >UniRef50_Q82T78 RhlE; ATP-dependent RNA helicase RhlE n=1 Tax=Nitrosomonas europaea RepID=Q82T78_NITEU Length = 498 Score = 617 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 230/449 (51%), Positives = 309/449 (68%), Gaps = 10/449 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F LGLS +IL AV ++GY PTPIQ Q IP++L G+D+MASAQTGTGKTAGFTLPLL Sbjct: 5 VTFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLL 64 Query: 61 QHLIT--RQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 L + R PVRALI+ PTRELA QI E+VR Y KYL +R+ VVFGG++I PQ Sbjct: 65 YRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQ 124 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 + L+ GV++LVATPGRLLDL Q AV + EILVLDEADRMLDMGF+ DI+RV+ L Sbjct: 125 IAALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMALLS 184 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 +RQ+L+FSATFS +I+ LA+ LL P+ IE A +NT ++ ++ +H+V K LL H Sbjct: 185 PQRQSLMFSATFSGEIRKLADSLLKQPVRIEAAVQNTVNESISHVIHWVKPDSKFALLLH 244 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 +I + N +Q L+F +TKHGA+HLA+ L++ I + AIHG+++Q RT+ALA+FK GD+++ Sbjct: 245 LIRQQNLKQALIFVKTKHGASHLAQMLSRHEISAVAIHGDRNQQQRTQALAEFKHGDVQI 304 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARG+DIE+L HV+NYELP PEDYVHRIGRTGRA + G+A+SLV E +LL Sbjct: 305 LVATDVAARGIDIEKLSHVINYELPGNPEDYVHRIGRTGRAGSKGKAISLVSEHEKELLA 364 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAK 418 +IEKLL ++ I G++ + ++ P R+ R G + G + + G K Sbjct: 365 NIEKLLNAKLETEQIAGFDAEQFARSLP---DRKNRMSAGNSRYGNKPME-----NGSEK 416 Query: 419 SASAKPAEKPSRRLGDAKPAGEQQRRRRP 447 S S K + PS + G Q+ P Sbjct: 417 SRSEKHRKLPSSQKYSGSRRGGTQKYSDP 445 >UniRef50_P17844 Probable ATP-dependent RNA helicase DDX5 n=52 Tax=Fungi/Metazoa group RepID=DDX5_HUMAN Length = 614 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 142/441 (32%), Positives = 228/441 (51%), Gaps = 9/441 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F +++ +A Q + EPT IQ Q P L G D++ AQTG+GKT + LP + Sbjct: 94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI 153 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + +G P+ L+L PTRELA Q+ + +Y + ++S ++GG PQ+ Sbjct: 154 VHINHQPFLERGDGPI-CLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIR 212 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GV++ +ATPGRL+D L + LVLDEADRMLDMGF IR+++ ++ Sbjct: 213 DLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPD 272 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 RQ L++SAT+ +++ LAE L + + I + +A+ + Q V K E L + Sbjct: 273 RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRL 332 Query: 240 IGK---GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 + + + +VF TK + L ++ +DG + IHG+KSQ R L +FK G Sbjct: 333 MEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKA 392 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 +L+ATD+A+RGLD+E++ V+NY+ PN EDY+HRIGRT R+ TG A + + K Sbjct: 393 PILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQ 452 Query: 357 LRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQN----GRQQRGGGGRGQGGGRGQQQPRR 412 + D+ +L++ I + + + +R G+ GG + R Sbjct: 453 VSDLISVLREANQAINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRE 512 Query: 413 GEGGAKSASAKPAEKPSRRLG 433 S+ K + G Sbjct: 513 NYDRGYSSLLKRDFGAKTQNG 533 >UniRef50_P24782 ATP-dependent RNA helicase dbp2 n=63 Tax=Eukaryota RepID=DBP2_SCHPO Length = 550 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 150/386 (38%), Positives = 225/386 (58%), Gaps = 8/386 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ G +L+ V + G+ PTPIQQQA P + GRD++ + TG+GKT + LP + Sbjct: 123 TFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAIV 182 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + + G P+ L+L PTRELA QI + + K IR+ V+GGV PQ+ Sbjct: 183 HINAQPLLSPGDGPI-VLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRD 241 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GV++ +ATPGRLLD+ N L +V LVLDEADRMLDMGF IR+++ ++ R Sbjct: 242 LIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR 301 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTAS-DQVTQHVHFVDKKRKRELL---- 236 Q ++FSAT+ +++ LA L++ +++ V + A+ + Q V VD KR L Sbjct: 302 QTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKDI 361 Query: 237 SHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 ++ + +VL+FT TK A+ + L +DG + AIHG+K+Q R L +F++G Sbjct: 362 EEVLKDRD-NKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKS 420 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 ++VATD+A+RG+D++ + HV NY+ P EDYVHRIGRTGRA A G A + D K Sbjct: 421 PIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQ 480 Query: 357 LRDIEKLLKKEIPRIAIPGYEPDPSI 382 R++ +L + I P E Sbjct: 481 ARELVSILSEAKQDID-PKLEEMARY 505 >UniRef50_C7PD17 DEAD/DEAH box helicase domain protein n=139 Tax=root RepID=C7PD17_CHIPD Length = 492 Score = 611 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 234/462 (50%), Positives = 306/462 (66%), Gaps = 15/462 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF+ LGL +L+A+ +GY PTPIQQQAIP VL+ RDL+ AQTGTGKTA F +PLL Sbjct: 27 LSFEQLGLIEPLLKALDNEGYTAPTPIQQQAIPHVLDTRDLLGCAQTGTGKTAAFAIPLL 86 Query: 61 Q--HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 Q H + KG R ++ALILTPTRELA QI E+ Y K+L+++SLV+FGGVS +PQ Sbjct: 87 QLMHQDQQAQQRKGLRNIKALILTPTRELAIQIQESFTAYGKFLDLKSLVIFGGVSQHPQ 146 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ GVD+L+ATPGRLLDL QN + L ++ VLDEADRMLDMGF+HD++RV+ KLP Sbjct: 147 TEALKKGVDILIATPGRLLDLISQNYITLRDIKYFVLDEADRMLDMGFVHDVQRVIVKLP 206 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHN-PLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 +RQ+L FSAT +I+ LA+ +L N P ++EV ++ ++ +TQ ++FV+K KR LL Sbjct: 207 EQRQSLFFSATMPPEIQTLAKAILRNNPAKVEVTPVSSTAETITQSMYFVNKNDKRNLLL 266 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 H++ + +LVFTRTKHGA+ + + L+K I + AIHGNKSQ AR RAL +FKS R Sbjct: 267 HILKDKAIKTLLVFTRTKHGADRVVKDLHKAEITAEAIHGNKSQNARQRALNNFKSQQTR 326 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 VLVATDIAARG+DI+EL HVVNYELPNVPE YVHRIGRTGRA A G A+S +E L Sbjct: 327 VLVATDIAARGIDIDELTHVVNYELPNVPETYVHRIGRTGRAGADGIAISFCEPEEKAFL 386 Query: 358 RDIEKLLKKEIPRIA-----------IPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRG 406 +DI KL+ +EIP +P +P P K + Q+ R ++GG R + G Sbjct: 387 KDILKLISREIPVETEHPFHNGDSMALPAPKPAPQQKPKQ-QHPRDKKGGFSRNRQGVVQ 445 Query: 407 QQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPR 448 + R G G K S KP + G RR RP+ Sbjct: 446 SRDARPGAGAGKPNSGKPNGGRPQGGKPKDGNGNSARRERPQ 487 >UniRef50_C4G990 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G990_9FIRM Length = 538 Score = 610 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 195/447 (43%), Positives = 279/447 (62%), Gaps = 5/447 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F GL D+L A+ + GY EPTP+Q+++IP +LEGRD++ AQTGTGKTA F LP+L Sbjct: 62 LKFSEFGLKKDLLSAIRKAGYEEPTPVQEESIPVILEGRDMIGCAQTGTGKTAAFALPVL 121 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + VRAL+LTPTRELA QI +N + Y +YL++R++ ++GG PQ+ Sbjct: 122 HKLTLLKRPR-----VRALVLTPTRELAIQIFDNFKKYGRYLHLRTVCLYGGAKRGPQIG 176 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR G D+LVATPGRLLD Q+ V L VEILVLDEADRMLDMGF+ D+ R++ P+K Sbjct: 177 ALRRGADILVATPGRLLDFMGQDLVDLSSVEILVLDEADRMLDMGFLPDVSRIVESTPSK 236 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ L+FSAT +++ LA+++L +P++++V N A+D V Q + F ++ KRE+++ ++ Sbjct: 237 RQTLMFSATMEKEVRQLADRMLKDPVQVQVTPENEAADTVEQKLIFSSREDKREIIASLL 296 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +VFTRTKHGA+ L+ +L + GI S AIHG+K+QG R AL FKSG +RV+V Sbjct: 297 TDEAVESAIVFTRTKHGADKLSRELKRRGIESVAIHGDKTQGQRQDALNRFKSGKVRVMV 356 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI +L HV NY++P Y+HRIGRTGRA +G A++L C E LR++ Sbjct: 357 ATDVAARGLDIPKLSHVFNYDVPEEAGAYIHRIGRTGRAGESGIAITLCCEAELDALREV 416 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 E+LL+K IP + P + + G R G + + + Sbjct: 417 EELLEKPIPELQTQWSLPLERKARKGKGGRTRHGRSGYRSGGQKNAGKSGHKTGSRNRQG 476 Query: 421 SAKPAEKPSRRLGDAKPAGEQQRRRRP 447 A +K G + + + RP Sbjct: 477 HADRRQKAGGASGSGRGRRRRDQGPRP 503 >UniRef50_P24783 ATP-dependent RNA helicase DBP2 n=131 Tax=Eukaryota RepID=DBP2_YEAST Length = 546 Score = 610 bits (1574), Expect = e-173, Method: Composition-based stats. Identities = 152/432 (35%), Positives = 230/432 (53%), Gaps = 5/432 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD G +L V +G+ +PT IQ Q P L GRD++ A TG+GKT + LP + Sbjct: 114 TFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIV 173 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + A G P+ L+L PTRELA QI + IR+ V+GGV + Q+ Sbjct: 174 HINAQPLLAPGDGPI-VLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRD 232 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L G ++++ATPGRL+D+ L +V LVLDEADRMLDMGF IR+++ ++ R Sbjct: 233 LSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR 292 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMI 240 Q L++SAT+ ++K LA L++P++++V +AS +TQ V V KR+ L+ + Sbjct: 293 QTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVVSDFEKRDRLNKYL 352 Query: 241 G---KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + N + L+F TK + + + L +DG + AIHG+K Q R L +F++G Sbjct: 353 ETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSP 412 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 ++VATD+AARG+D++ + +V+NY++P EDYVHRIGRTGRA ATG A+S L Sbjct: 413 IMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLG 472 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 + ++++ I + D RGG G G G Sbjct: 473 AKLISIMREANQNIPPELLKYDRRSYGGGHPRYGGGRGGRGGYGRRGGYGGGRGGYGGNR 532 Query: 418 KSASAKPAEKPS 429 + S Sbjct: 533 QRDGGWGNRGRS 544 >UniRef50_Q2SZW4 ATP-dependent RNA helicase RhlE n=104 Tax=Proteobacteria RepID=Q2SZW4_BURTA Length = 571 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 233/458 (50%), Positives = 300/458 (65%), Gaps = 7/458 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD GL+ +ILRA+AEQGY PTPIQ AIP VL GRD+M +AQTGTGKTA F+LP++Q Sbjct: 102 TFDQFGLAAEILRAIAEQGYTTPTPIQANAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 161 Query: 62 HLITRQ--PHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 L+ + + R PVRALILTPTRELA Q+ NV Y+K+ +RS VVFGGV +NPQM Sbjct: 162 RLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQM 221 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 +LR GV++L+ATPGRLLD Q L QV+ILVLDEADRMLDMGF+ D++R+L LP Sbjct: 222 AELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLPK 281 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ LLFSATFS +IK LA L NP IEVAR N A+ VTQ V+ V + K+ + + Sbjct: 282 ERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVVKL 341 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I + +QV+VF +K GA+ LA Q+ +DGI +AAIHG++SQ R +AL FK G+I L Sbjct: 342 IRDRSLKQVIVFCNSKIGASRLARQIERDGIVAAAIHGDRSQSERMQALDAFKRGEIEAL 401 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLDI ELP V+N++LP EDYVHRIGRTGRA A+G+ALSL +E K L D Sbjct: 402 VATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQLAD 461 Query: 360 IEKLLKKEIP----RIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG 415 IEKL+K+ + + +P + D + ++ GR GG PRR E Sbjct: 462 IEKLIKRTLSLETLELDLPRHRHDERGGRRERERDERRGASAGRRSAGGERAHHPRR-EA 520 Query: 416 GAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAA 453 KP S + Q ++ P++P AA Sbjct: 521 PIDDFFLKPYVPSSSANQPEEAKPAQPEKKAPKQPLAA 558 >UniRef50_D2LSA7 DEAD/DEAH box helicase domain protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSA7_BACS4 Length = 528 Score = 605 bits (1562), Expect = e-172, Method: Composition-based stats. Identities = 156/390 (40%), Positives = 230/390 (58%), Gaps = 7/390 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+ +S DI +A+ + G+ P+PIQ++ IP +L+G D++ AQTGTGKTA F +PLL Sbjct: 2 MKFEDFQISNDIKKAIKDMGFEAPSPIQEKVIPEILKGHDVIGQAQTGTGKTAAFGIPLL 61 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + R V++LILTPTRELA Q+ ++ SK+ + L ++GG SI Q+ Sbjct: 62 EKV-------TSDRQVQSLILTPTRELAIQVAGELQKLSKFKRSQILPIYGGQSIGHQIK 114 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GV V+V TPGR+LD ++ ++L V L+LDEAD MLDMGFI DI ++L ++ Sbjct: 115 ALKRGVQVVVGTPGRVLDHLNRKTLQLRSVHTLILDEADEMLDMGFIEDIEKILQQVNTN 174 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT I+ L+ K ++NP ++ +++ + + Q V +K K + L +I Sbjct: 175 RQTMLFSATMPPPIRKLSNKYMNNPKQVTISKGEVTAPSINQVYFKVLEKNKLDSLCRVI 234 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++F RTK G L E L G + +HG+ +Q R + F+ I L+ Sbjct: 235 DSETIDLGIIFCRTKKGVAELTEALQARGYMADGLHGDLTQSQRDIVMKKFRDSSIEFLI 294 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+D+E + HV+NY++P PE YVHRIGRTGRA G A++LV E K LR I Sbjct: 295 ATDVAARGIDVENVSHVINYDIPQDPESYVHRIGRTGRAGREGVAVTLVTPREMKHLRSI 354 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 E +K IP IP E + + Sbjct: 355 EAEIKMTIPSQRIPSVEEVVEKQQHVWKGQ 384 >UniRef50_Q5N7W4 DEAD-box ATP-dependent RNA helicase 30 n=3 Tax=Oryza sativa Japonica Group RepID=RH30_ORYSJ Length = 666 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 152/414 (36%), Positives = 235/414 (56%), Gaps = 4/414 (0%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F ++A+A+ G+ EPTPIQ Q P L+GRD++ AQTG+GKT + LP L H Sbjct: 253 FQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVH 312 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + + +G P+ LIL PTRELA QI + + Y RS ++GG PQ+ L Sbjct: 313 VGAQPRLEQGDGPI-VLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDL 371 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 R GV++++ATPGRL+D+ L +V LVLDEADRMLDMGF IR+++ ++ RQ Sbjct: 372 RRGVEIVIATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQ 431 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMIG 241 L +SAT+ ++++LA + L NP ++ + + A+ + Q + + + K LS ++ Sbjct: 432 TLYWSATWPREVESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLS 491 Query: 242 K-GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + ++L+F +TK + + QL DG + +IHG+K+Q R LA+FKSG ++ Sbjct: 492 DLMDGSRILIFFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMA 551 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD++++ V+N++ P EDY+HRIGRTGRA A+G A + + K R++ Sbjct: 552 ATDVAARGLDVKDIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAKFSRNL 611 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE 414 K+L++ + P E + + RG GG G G R Sbjct: 612 VKILREAGQVVN-PALESMAKSASSMGGGNFRSRGRGGFGNRSGSNSIPIRGRR 664 >UniRef50_Q0AFH3 DEAD/DEAH box helicase domain protein n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AFH3_NITEC Length = 488 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 227/454 (50%), Positives = 306/454 (67%), Gaps = 2/454 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+ L LS +ILRAV ++GY PTPIQ Q IP +L G+D+MASAQTGTGKTAGFTLPLL Sbjct: 5 VTFEQLDLSSEILRAVIDEGYINPTPIQAQVIPPILAGKDVMASAQTGTGKTAGFTLPLL 64 Query: 61 QHLITRQPHA--KGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 HL + R PVRALI+ PTRELA QI E+VR Y KYL +R+ VVFGGV+I PQ Sbjct: 65 HHLQAHASSSTSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTTVVFGGVNIEPQ 124 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 + +LR GV++LVATPGRLLDL AV + EILVLDEADRMLDMGF+ DI++V+ LP Sbjct: 125 ITELRNGVEILVATPGRLLDLVEHKAVNFSKTEILVLDEADRMLDMGFLPDIKKVMALLP 184 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 ++RQ+L+FSATFSD+I+ LA+ LL +P+ IEVA +NT ++ ++ VH + + K LL H Sbjct: 185 SQRQSLMFSATFSDEIRKLADGLLKHPVRIEVAAQNTINESISHVVHRIKPESKFALLLH 244 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + + +Q LVF +TKHGA+ LA+ L+ I + AIHG+K+Q RT+AL++FK GD+++ Sbjct: 245 LVKQQDLKQALVFVKTKHGASQLAQMLSHHKILALAIHGDKNQQQRTQALSEFKHGDVQI 304 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARG+DIE+L HVVNYELP PEDYVHRIGRTGRA + G+A+SLV E +LL Sbjct: 305 LVATDVAARGIDIEKLSHVVNYELPGNPEDYVHRIGRTGRAGSKGKAISLVSEHETELLT 364 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAK 418 IEKLL ++ I G++ + +++ P + R R + + Sbjct: 365 SIEKLLNTKLEIEQIAGFDAELFVRSLPDRKNRVSADIARRSNKQAEVANGEKTRKYSGS 424 Query: 419 SASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAA 452 SA K P + P++ A Sbjct: 425 RRSALQNHKDPIFTQPYIPQANPVQLATPKQSDA 458 >UniRef50_Q0HYG8 DEAD/DEAH box helicase domain protein n=78 Tax=Bacteria RepID=Q0HYG8_SHESR Length = 549 Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats. Identities = 261/457 (57%), Positives = 332/457 (72%), Gaps = 5/457 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF SLGLS I +AV EQGY P+PIQ QAIPAVL G+D+MA+AQTGTGKTAGFTLPLL Sbjct: 1 MSFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L +RAL+LTPTRELAAQ+ E+V Y KYL +RS VVFGGV INPQ+ Sbjct: 61 ELLSKGNKAKA--GQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQ 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KLR GVDVLVATPGRLLDL QN VK +Q+EILVLDEADRMLDMGFI DI+++L LPAK Sbjct: 119 KLRHGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAK 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNL+FSATFSD+I+ LA+ L++ P+EI V RN A++ V Q + VDK +K LL +I Sbjct: 179 RQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSALLIQLI 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +WQQVLVF+RTKHGAN LA+ L + I +AAIHGNKSQGART+ALADFKSG++RVLV Sbjct: 239 KQEDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLV 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARGLDI++LP VVN++LPNVPEDYVHRIGRTGRA A+G+A+SLV +E KLLRDI Sbjct: 299 ATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSSEEFKLLRDI 358 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEP-IQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKS 419 E+L+ + + R I G+ P ++ I +G+ + Q R +P G + Sbjct: 359 ERLINRVLERQEIEGFGPAHALPESTLIAHGKDNKVKAVASQRKHRSAGKPTPRTGTGRD 418 Query: 420 ASAKPA--EKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 P + +++ G++ + + ++P +++ Sbjct: 419 GRKTPDSIDGSAQQKNSNPNQGQRNNQGQHKRPQSSK 455 >UniRef50_B0TII3 Dead/deah box helicase n=18 Tax=Bacteria RepID=B0TII3_HELMI Length = 540 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 150/401 (37%), Positives = 235/401 (58%), Gaps = 6/401 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F + LSP + +A+ + G+ EP+PIQ +AIP +++G+DL+ AQTGTGKTA F +P+ Sbjct: 18 VKFGEIELSPKVAKAIFDMGFEEPSPIQAKAIPVIMQGKDLIGQAQTGTGKTATFGIPMA 77 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L V+AL+L PTRELA Q+ + + + ++++L V+GG SI+ Q+ Sbjct: 78 ETLN------PRDGRVQALVLCPTRELAIQVAQEISKIGRQNDLKALPVYGGQSIDRQIR 131 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR GV V++ TPGR+LD + ++L+ V ++VLDEAD MLDMGF+ DI +L + P + Sbjct: 132 ALRYGVQVVIGTPGRILDHLSRKTLRLNNVRMVVLDEADEMLDMGFVEDIEAILKETPEE 191 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT I+ LA + + P + ++R + Q + + +K + L ++ Sbjct: 192 RQTLLFSATMPGPIQQLARQYMKEPEFVTISRDKLTVPLIEQVYYECKESQKVDALCRIL 251 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++F RTK G + L L G + +HG+ +Q R R + F+ G +L+ Sbjct: 252 DMEEIGSSIIFCRTKRGVDELVAALETRGYFAEGLHGDLTQAQRDRVMKKFRDGKAELLI 311 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD+E + HV+NY++P PE YVHRIGRTGRA G A++L+ E++ L+ I Sbjct: 312 ATDVAARGLDVENVTHVINYDIPQDPESYVHRIGRTGRAGRKGIAITLINYREYRQLKLI 371 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQ 401 E++ K I R +P + E + + GG Sbjct: 372 ERVTKARIQRRDLPSMADIVERQKEAHKMKIVKLLDGGHFG 412 >UniRef50_Q1ECV0 LOC556764 protein (Fragment) n=21 Tax=Eukaryota RepID=Q1ECV0_DANRE Length = 519 Score = 602 bits (1554), Expect = e-171, Method: Composition-based stats. Identities = 136/382 (35%), Positives = 214/382 (56%), Gaps = 5/382 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F ++ + +Q ++EPT IQ Q P L GRD++ AQTG+GKT + LP + Sbjct: 96 NFHQAQFPQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIV 155 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + +G P+ L+L PTRELA Q+ + DY K I+S V+GG PQ+ Sbjct: 156 HINHQPYLERGDGPI-CLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRD 214 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GV++ +ATPGRL+D L + LVLDEADRMLDMGF IR+++ ++ R Sbjct: 215 LERGVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR 274 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMI 240 Q L++SAT+ +++ LAE L + ++I + +A+ + Q V + K L ++ Sbjct: 275 QTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENEKDNKLIQLM 334 Query: 241 GK---GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + + ++F TK + L ++ +DG + IHG+KSQ R L +F+SG Sbjct: 335 EEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAP 394 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +L+ATD+A+RGLD+E++ V+NY+ PN EDYVHRIGRT R+ G A + + Sbjct: 395 ILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQA 454 Query: 358 RDIEKLLKKEIPRIAIPGYEPD 379 RD+ ++L++ I + Sbjct: 455 RDLVRVLEEARQAINPKLLQLV 476 >UniRef50_D2RJY3 DEAD/DEAH box helicase domain protein n=2 Tax=Firmicutes RepID=D2RJY3_ACIFE Length = 544 Score = 601 bits (1550), Expect = e-170, Method: Composition-based stats. Identities = 154/398 (38%), Positives = 235/398 (59%), Gaps = 8/398 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF+ L L IL A+ E G+ EP+PIQ+ AIP LEG DL+ AQTGTGKTA F +P++Q Sbjct: 20 SFEDLNLDRKILAALKEMGFEEPSPIQKGAIPMALEGEDLIGQAQTGTGKTAAFGIPIIQ 79 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + + R ++AL+++PTREL Q+ + + K IR L V+GG I Q+ Sbjct: 80 KINEK------DRHIQALVMSPTRELCIQVADEISKIGKTKRIRVLPVYGGQPIERQIRS 133 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G+ V++ TPGRLLD + + L+ V LVLDEAD MLDMGF+ D+ ++ +P +R Sbjct: 134 LKRGIQVVIGTPGRLLDHIRRGTIDLEYVNFLVLDEADEMLDMGFVDDMENIIKNVPPER 193 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q +LFSAT I ++++K + P + + + + + Q+ + + K + L ++ Sbjct: 194 QTMLFSATMPRPILSISKKYMRAPKVVAIHKEVVTAPTIDQYYYET--RDKVDGLCRILD 251 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + ++++F RTK G + L L G + +HG+ SQ R R + F+SG + +LVA Sbjct: 252 TTDDCKMIIFCRTKKGVDELVIALATRGYEAEGLHGDLSQNQRDRVMKKFRSGQVDILVA 311 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLDI+ + HVVN+++P+ E YVHRIGRTGRA TG AL+ + E + L+ IE Sbjct: 312 TDVAARGLDIDNITHVVNFDVPSDSESYVHRIGRTGRAGNTGVALTFITPREFRQLKLIE 371 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGR 399 + +K +I R +P + E I + Q R Sbjct: 372 RSIKTKIIRGTLPTDASVLERQREQIVSKMQTILEQDR 409 >UniRef50_A3FQ59 Putative uncharacterized protein n=1 Tax=Cryptosporidium parvum Iowa II RepID=A3FQ59_CRYPV Length = 586 Score = 600 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 157/412 (38%), Positives = 240/412 (58%), Gaps = 7/412 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF + G ++ A+ G+ EPT IQ Q P L G D++ A+TG+GKT GF LP + Sbjct: 169 SFVTSGFPNFLVDALYRTGFTEPTAIQVQGWPVALSGHDMIGIAETGSGKTLGFLLPAMI 228 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + G P+ L+L PTREL QI E + +R+ ++GGV PQ Sbjct: 229 HIRAQPLLRYGDGPI-CLVLAPTRELVEQIREQANQFGSIFKLRNTAIYGGVPKRPQQAS 287 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 +R GV++ +A PGRL+DL + L +V LVLDEADRMLDMGF IR++++++ R Sbjct: 288 IRNGVEICIACPGRLIDLLEEGYTNLSRVTYLVLDEADRMLDMGFEPQIRKLVSQIRPDR 347 Query: 182 QNLLFSATFSDDIKALAEKLLHN-PLEIEVARRN--TASDQVTQHVHFVDKKRKRELLSH 238 Q LL+SAT+ +++ LA L P+ I V + AS + Q+V+ V++ K+ L Sbjct: 348 QTLLWSATWPKEVQKLARDLCKEIPIHINVGSVDALKASHNIKQYVNVVEESEKKAKLKM 407 Query: 239 MIGK---GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295 +G+ + +VL+F TK GA+ L ++L DG + IHG+K Q RT L +F++G Sbjct: 408 FLGQVMVESAPKVLIFCETKRGADILTKELRLDGWPALCIHGDKKQEERTWVLNEFRTGA 467 Query: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK 355 +++ATD+AARGLDI+++ V+N++ PN EDY+HRIGRTGRA ATG +LS D+++ Sbjct: 468 SPIMIATDVAARGLDIKDINFVINFDFPNQIEDYIHRIGRTGRAGATGVSLSFFTPDKYR 527 Query: 356 LLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQ 407 + D+ K+LK+ R+ ++ P K +N +R GG + Sbjct: 528 MASDLIKVLKEAKQRVPPELFKLSPQNKRMHPRNTGFRRNNPNSLPLGGSNR 579 >UniRef50_Q126W4 DEAD/DEAH box helicase-like n=153 Tax=Bacteria RepID=Q126W4_POLSJ Length = 579 Score = 599 bits (1547), Expect = e-170, Method: Composition-based stats. Identities = 251/429 (58%), Positives = 313/429 (72%), Gaps = 3/429 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F+ L L+P IL+AV EQGY PTPIQ QAIPAVL G DL+ AQTGTGKTA FTLP+L Sbjct: 1 MTFEELKLAPAILKAVLEQGYDTPTPIQAQAIPAVLAGSDLLGGAQTGTGKTAAFTLPML 60 Query: 61 QHLITRQPHAKGRR--PVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 Q L T R VRALI+TPTRELAAQ+ E+VR Y KYL++ S+V+FGGV + Q Sbjct: 61 QRLSTEPRLTNRRGVNAVRALIMTPTRELAAQVEESVRTYGKYLDLTSMVMFGGVGMGAQ 120 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 + KLR GVD+LVATPGRLLD Q + L QV+ILVLDEADRMLDMGFIHDI++VL +P Sbjct: 121 IDKLRRGVDILVATPGRLLDHAGQGTLDLSQVQILVLDEADRMLDMGFIHDIKKVLALVP 180 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 +Q+LLFSATFSD+I+ LA LL +PL I+V RNT ++TQ +H V + +K+ LL+H Sbjct: 181 KHKQSLLFSATFSDEIRELANGLLRDPLHIQVTPRNTTVQRITQTIHPVGRSKKKALLTH 240 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 +I + NW QVLVFTRTK GAN++AE L K+GI + A+HGNKSQ ART+AL FK G IR Sbjct: 241 IINEHNWSQVLVFTRTKFGANNVAEHLTKNGIEAMALHGNKSQTARTQALQGFKDGTIRA 300 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATDIAARG+DI+ELPHVVNYE+PNV EDYVHRIGRTGRA +GEA+SLVC+DE ++ Sbjct: 301 LVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGNSGEAVSLVCLDEEGFMQ 360 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAK 418 DIE+ K+ I ++ +PG+E +P +AEP+ GRQ GG G+ R Q ++ Sbjct: 361 DIERFTKQNIEKVLVPGFEAEPGERAEPLAMGRQT-IWGGLGKPPSRDVMQAAAKAARSE 419 Query: 419 SASAKPAEK 427 K Sbjct: 420 MMQRIRDTK 428 >UniRef50_C1D673 RhlE3 n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D673_LARHH Length = 582 Score = 599 bits (1546), Expect = e-170, Method: Composition-based stats. Identities = 270/457 (59%), Positives = 326/457 (71%), Gaps = 4/457 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF L L +LRA+ E GY EPTPIQ++AI VL GRDLMA+AQTGTGKTAGF LPLL Sbjct: 4 ISFADLQLVDPLLRAITEAGYTEPTPIQREAIAPVLAGRDLMAAAQTGTGKTAGFALPLL 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L PH R L+LTPTRELAAQ+GE++ +L + SLV+FGGV + PQ+ Sbjct: 64 QRLAATHPHPHPAGRPRGLVLTPTRELAAQVGESIATLGTHLPLTSLVIFGGVRVKPQIE 123 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L VD+L+ATPGRL+DL Q AV L VEILVLDEADRMLDMGFI D+R+VL LPA+ Sbjct: 124 ALTQRVDILIATPGRLIDLAKQEAVDLSGVEILVLDEADRMLDMGFIRDVRKVLKLLPAE 183 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSATF+DDIKALA+ LH+P +EV+ N+ ++ VT HVH VD+ RKRELL+H++ Sbjct: 184 RQNLLFSATFNDDIKALADTFLHDPQLVEVSPPNSTTELVTHHVHLVDRNRKRELLTHLV 243 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 WQQVLVFTRTKHGAN LAE L K GI +AAIHGNKSQGARTRAL++FK G +RVLV Sbjct: 244 ESRQWQQVLVFTRTKHGANRLAEVLAKGGIPAAAIHGNKSQGARTRALSEFKDGSLRVLV 303 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+DI ELP VVNYELPNVPEDYVHRIGRTGRA + GEA+SLVCVDE KLL DI Sbjct: 304 ATDIAARGIDISELPQVVNYELPNVPEDYVHRIGRTGRAGSPGEAVSLVCVDELKLLADI 363 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAE---PIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 E + + IP+ PG+E D S+ + P ++ + ++ G G G R +++P Sbjct: 364 EAFIGRPIPQFTEPGFEADLSVPPQPLLPPRHQQGRQDGEGGEPRGQRNKKKPHNKPARR 423 Query: 418 KSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 A P + P G P E Q R+ RKPA Q Sbjct: 424 ADAPTLPMDAPEHDSGAPAPVAEAQPPRQ-RKPAPGQ 459 >UniRef50_D2QWU0 DEAD/DEAH box helicase domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWU0_9PLAN Length = 598 Score = 598 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 212/478 (44%), Positives = 283/478 (59%), Gaps = 29/478 (6%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF+ LGL+ ++RA+ Y EPT IQ QAIP + GRDL AQTGTGKTA F LPLL Sbjct: 1 MSFEDLGLAEPLVRALNAANYTEPTAIQLQAIPPAIAGRDLQGCAQTGTGKTAAFALPLL 60 Query: 61 QHLITRQPHAKGRRP-VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 LI K R RAL+L+PTRELA QI ++VR Y ++ SL ++GGVS PQ+ Sbjct: 61 DRLIKNPRQGKLRGRLPRALVLSPTRELAGQIHDSVRRYGRHAMQNSLTIYGGVSQVPQV 120 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L G DVL+ATPGRL DL Q + L ++E+ VLDEADRMLDMGF+ DIRR++ KLP Sbjct: 121 KGLNAGQDVLIATPGRLCDLMQQGYINLSEIEVFVLDEADRMLDMGFMPDIRRIIAKLPQ 180 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 ++Q LLFSAT +I+ LA +LLH+P+EI + +D +TQ +++V K K ELL+ + Sbjct: 181 QKQTLLFSATMPPEIQKLASQLLHDPVEINIEPERATADGITQSLYYVPTKHKPELLASV 240 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + + +VF RTKHG N A QL K G++ AIHGNKSQ AR R L FK+G I+VL Sbjct: 241 LKREEVTRAVVFVRTKHGCNKAALQLEKTGLKVDAIHGNKSQSARQRTLYAFKNGHIQVL 300 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD+ + HV+NY+LP PE YVHRIGRTGRA +G A+S ++ LLRD Sbjct: 301 VATDVAARGLDVTGVSHVINYDLPMEPETYVHRIGRTGRAGKSGIAISFCDDEQRGLLRD 360 Query: 360 IEKLLKKEIPRI-AIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQ---------- 408 ++++L K+IP +P P + ++ G + G G Sbjct: 361 VQRILGKKIPVENEMPDGIPGLPANIDRDGGAKRAPWGNKKPFRAGPGGGGGYGGGNRSS 420 Query: 409 ---------------QPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPA 451 + G P + SR G +P GE R RP++P+ Sbjct: 421 GGSGGSRGFGGRKPYRSGGDRDGQGGGYGAPRDGGSREGGYGRPQGE--RPARPQRPS 476 >UniRef50_Q54CE0 Probable ATP-dependent RNA helicase ddx17 n=2 Tax=Eukaryota RepID=DDX17_DICDI Length = 785 Score = 598 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 144/403 (35%), Positives = 224/403 (55%), Gaps = 3/403 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F +++ + G+ PTPIQ QA P L+GRD++ A+TG+GKT F LP + Sbjct: 384 MQFTQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSI 443 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + + P+ L+L PTRELA QI E + I + V+GG S + Q+ Sbjct: 444 VHINAQPVLREDDGPI-VLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVA 502 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GV++++ATPGRL+D+ L +V LVLDEADRMLDMGF IR++++++ Sbjct: 503 ALKKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPD 562 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTA-SDQVTQHVHFVDKKRKRELLSHM 239 RQ L+FSAT+ +++ALA L + +++ + + V Q V K+E + Sbjct: 563 RQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEKKERMLSF 622 Query: 240 IGKGN-WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 +G ++V+VF T+ G + L L G +S IHGNKSQ R L+ FK+G + + Sbjct: 623 LGSVGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPI 682 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 ++ATD+A+RGLDI+++ +VVNY+ PN E Y+HRIGRT RA A+G + SL+ D +L Sbjct: 683 MIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLLTTDNARLAN 742 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQ 401 ++ K+L + +I I + + Sbjct: 743 ELIKVLTEAKQKIPIELSNLSVTPSTSSNTKKFSPYPTYSKRY 785 >UniRef50_A2SQE1 DEAD/DEAH box helicase domain protein n=17 Tax=cellular organisms RepID=A2SQE1_METLZ Length = 656 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 146/399 (36%), Positives = 225/399 (56%), Gaps = 7/399 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F +S ++L+A+ + G+ EPTPIQ AIP +L+G+D+ AQTGTGKTA F +P+++ Sbjct: 6 TFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPIIE 65 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 L + V+AL+L+PTRELA Q E KY + + ++GG I Q+ Sbjct: 66 RLD------PDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLR 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+G V V++ TPGR++D + + LD V + +LDEAD+MLDMGF DI + P Sbjct: 120 ALKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIEDIFRDTPKD 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT I + + +P +++ R+ Q+ Q V ++ K E L + Sbjct: 180 RQTILFSATMPQPILDITRRFQRDPQFVKITRKELTVPQIEQTYIEVRERDKLEALCRTL 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 N + LVF TK + L ++ G A+HG+ Q R R +A F+SG I VL+ Sbjct: 240 DMNNPELALVFCNTKRTVDDLMSRMQARGYFVEALHGDMKQQQRDRVMARFRSGSIDVLI 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+D++++ V NY++P E YVHRIGRT RA TG++++ V E LRDI Sbjct: 300 ATDVAARGIDVDDVDIVFNYDVPQDVEYYVHRIGRTARAGRTGKSVTFVAPREIYKLRDI 359 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGR 399 ++ K +I + +P + +K + + + G Sbjct: 360 QRYAKIQIAKTPLPTLDDVAEMKQQIFLDKVRDIMAAGN 398 >UniRef50_C5CU85 DEAD/DEAH box helicase domain protein n=10 Tax=Comamonadaceae RepID=C5CU85_VARPS Length = 601 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 243/407 (59%), Positives = 304/407 (74%), Gaps = 2/407 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+FD L L+P IL+AV E GY PTPIQ QAIPAVLEG DL+ AQTGTGKTA FTLP+L Sbjct: 1 MNFDELKLAPAILKAVHEHGYDTPTPIQAQAIPAVLEGHDLLGGAQTGTGKTAAFTLPML 60 Query: 61 QHLITRQPHAKGRRPV--RALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 L T + RAL+LTPTRELAAQ+ E+VR Y KYL + S V+FGGV +NPQ Sbjct: 61 HKLSTGASATNKFGGIGIRALVLTPTRELAAQVEESVRTYGKYLELDSTVIFGGVGMNPQ 120 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 + KL+ GVD+LVATPGRLLDL+ Q + L QV++L+LDEADRMLDMGFIHD++++L +P Sbjct: 121 ISKLKKGVDILVATPGRLLDLQQQGMLDLSQVQMLILDEADRMLDMGFIHDVKKILALVP 180 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 ++Q+LLFSATFSD+I+ LA LL NP I+V RNT ++TQ +H V + +K+ LL+H Sbjct: 181 KEKQSLLFSATFSDEIRDLAATLLKNPQSIQVTPRNTTVQRITQVIHPVGRGKKKALLAH 240 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 +I + W QVLVFTRTK GAN +AE L K+GI + A+HGNKSQ ART+ALA FKSGDIR Sbjct: 241 IINENKWSQVLVFTRTKFGANSVAEFLTKNGIEAMALHGNKSQSARTQALAGFKSGDIRA 300 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATDIAARG+DI+ELPHVVNYE+PNV EDYVHRIGRTGRA ++GEA+S VC+DE ++ Sbjct: 301 LVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGSSGEAVSFVCMDEEGFMQ 360 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGR 405 +IE+ K+ IP + G+ P+ +AEPI GRQ GG Sbjct: 361 EIERFTKQTIPVQFVEGFGPEEGERAEPIAMGRQTIWGGAGRPPSRD 407 >UniRef50_A2QC74 ATP-dependent RNA helicase dbp2 n=35 Tax=Eukaryota RepID=DBP2_ASPNC Length = 565 Score = 597 bits (1541), Expect = e-169, Method: Composition-based stats. Identities = 149/382 (39%), Positives = 224/382 (58%), Gaps = 5/382 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD G +L V QG+ PT IQ Q P L GRD++ A+TG+GKT + LP + Sbjct: 138 TFDEAGFPQYVLSEVKAQGFDRPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIV 197 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + A G P+ LIL PTRELA QI + + K IR+ V+GGV PQ+ Sbjct: 198 HINAQPLLAPGDGPI-VLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRD 256 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GV+V +ATPGRL+D+ L +V LVLDEADRMLDMGF IR++++++ R Sbjct: 257 LSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDR 316 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMI 240 Q ++SAT+ +++ LA L++ +++ + + +A+ ++TQ V V KR+ + + Sbjct: 317 QTCMWSATWPKEVRQLASDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHL 376 Query: 241 G---KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + + L+FT TK A+ + L +DG + +IHG+K Q R L +FK+G Sbjct: 377 EKIMENRANKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSP 436 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 ++VATD+A+RG+D+ ++ HV+NY+ PN EDYVHRIGRTGRA A G A++ D K Sbjct: 437 IMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNSKQA 496 Query: 358 RDIEKLLKKEIPRIAIPGYEPD 379 RD+ +L + +I E Sbjct: 497 RDLVTILTEAKQQIDPRLAEMV 518 >UniRef50_D2QGG1 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=D2QGG1_9SPHI Length = 485 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 219/468 (46%), Positives = 295/468 (63%), Gaps = 16/468 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L L IL+A+ E+GY PTPIQ++AIP +L RDL+ AQTGTGKTA F +P+L Sbjct: 1 MQFSELSLIDPILKALTEEGYTNPTPIQEKAIPILLSRRDLLGCAQTGTGKTAAFAIPIL 60 Query: 61 QHLITRQPHAKG-RRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 Q L + + G R ++ LILTPTRELA QI E+ Y ++LNIR+ V+FGGVS + Q+ Sbjct: 61 QLLSEERSKSTGGPRRIKTLILTPTRELAIQIAESFTAYGRHLNIRNTVIFGGVSQHSQV 120 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ GVDVL+ATPGRLLDL +Q + L V+ VLDEADRMLDMGFIHD+++V+TKLP Sbjct: 121 NTLKAGVDVLIATPGRLLDLMNQGFISLRDVQFFVLDEADRMLDMGFIHDVKKVITKLPT 180 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ+L FSAT D+ LA+ +L+NP ++EV ++ +D + Q ++FV K+ KR+LL H+ Sbjct: 181 HRQSLFFSATMPPDVAKLADTILNNPAKVEVTPVSSTADTIEQAMYFVGKEDKRKLLVHI 240 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + N + LVF RTKHGA+ + + L K GI + AIHGNKSQ AR RAL++FKS + RVL Sbjct: 241 LDDKNIKSALVFARTKHGADKVVKDLLKAGIGAEAIHGNKSQNARQRALSNFKSRETRVL 300 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARG+D++EL HV+NYELPN+PE YVHRIGRTGRA G ALS +E + LRD Sbjct: 301 VATDIAARGIDVDELSHVINYELPNIPETYVHRIGRTGRAGHDGIALSFCDAEETEYLRD 360 Query: 360 IEKLLKKEIPRI---------------AIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGG 404 I KL+ K +P I P + +NG + GG G G Sbjct: 361 IHKLIGKRVPVIDNHPYVLDIATATVTPAPARQGQGRGGNGGNRNGGGRSGGSGSFNRNG 420 Query: 405 RGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAA 452 R G ++ + + + + ++ RP +P + Sbjct: 421 NNNNSRRADNSGPARSTDQRSSSSDGSYRRDENSAPKRPSSRPSQPQS 468 >UniRef50_Q5L3G9 DEAD-box ATP-dependent RNA helicase cshA n=94 Tax=Firmicutes RepID=CSHA_GEOKA Length = 467 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 152/384 (39%), Positives = 231/384 (60%), Gaps = 6/384 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS ++++A+ G+ E TPIQ + IP L+ +D++ AQTGTGKTA F +P+++ Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + + V+AL++ PTRELA Q+ E + +R L ++GG I Q+ Sbjct: 63 KVNVKNS------AVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRA 116 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ V+V TPGR++D ++ ++L+ V +VLDEAD ML+MGFI DI +L+ +PA+R Sbjct: 117 LKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAER 176 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT D I+ +AE+ ++ P ++V + + Q+ V +K+K ++L+ ++ Sbjct: 177 QTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTRLLD 236 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +VF RTK + LAE LN G + IHG+ SQ R L FK G I +LVA Sbjct: 237 IQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVA 296 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLDI + HV N+++P PE YVHRIGRTGRA TG A++ V E L IE Sbjct: 297 TDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIE 356 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAE 385 + K+++ R+ P + + Sbjct: 357 RTTKRKMERMKPPTLDEALEGQQR 380 >UniRef50_C4Q0V4 DEAD box ATP-dependent RNA helicase, putative n=1 Tax=Schistosoma mansoni RepID=C4Q0V4_SCHMA Length = 769 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 143/407 (35%), Positives = 230/407 (56%), Gaps = 4/407 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF+ L + IL +A+ G++ PTPIQ Q P L GRD++ AQTG+GKTA F LP + Sbjct: 92 LSFNELNVPDYILSVIAKNGWQLPTPIQSQGWPMALSGRDVVGIAQTGSGKTASFLLPAV 151 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H++ + + P+ LIL PTRELA Q+ ++++ ++R++ +GG + Q+ Sbjct: 152 IHIMAQPRLLRNEGPI-CLILVPTRELAQQVLVVAKEFADAASLRAMCFYGGSAKGTQLR 210 Query: 121 KLRGGVDVLVATPGRLLDLEH-QNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 +++ G ++ +ATPGRL+D Q + L +V LVLDEADRMLDMGF IR+++ Sbjct: 211 EMQKGGEICIATPGRLIDFIRVQRNL-LSRVTYLVLDEADRMLDMGFEPQIRKIIGHTRP 269 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNT-ASDQVTQHVHFVDKKRKRELLSH 238 RQ L++SAT+ +++ LA + L + +++ + + A+ +TQ V +D K + L Sbjct: 270 DRQTLMWSATWPREVQTLAREFLTDYIQVNIGSVSLHANPNITQIVEIMDDWSKEQRLIE 329 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + LVF TK + L L + G A+HG K Q R LA+FKSG + + Sbjct: 330 LLTSFGRARTLVFVETKRRTDQLTNSLRRRGFYVEAMHGGKQQRDRELTLANFKSGRMNI 389 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+A+RGLDI+ + +VVN++ PN EDY+HRIGRT R+ TG A + + R Sbjct: 390 LVATDVASRGLDIDNIEYVVNFDFPNQTEDYIHRIGRTARSDKTGTAFTFFTHKNVRQAR 449 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGR 405 D+ +L + I+ + + ++ + + GR Sbjct: 450 DLIDILDEANQEISAELVQLAGMSNYLRKSSTLKKNPPAFQQKPPGR 496 >UniRef50_Q81IT9 DEAD-box ATP-dependent RNA helicase cshA n=84 Tax=cellular organisms RepID=CSHA_BACCR Length = 533 Score = 594 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 161/415 (38%), Positives = 235/415 (56%), Gaps = 6/415 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS +L++V G+ E TPIQ + IP L+G+D++ AQTGTGKTA F LPLL Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + T + V+ +++ PTRELA Q+GE + K+ +R L ++GG IN Q+ Sbjct: 63 KVDTHKES------VQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRA 116 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ ++V TPGR+LD ++ ++L VE +VLDEAD ML+MGFI DI +LT +P Sbjct: 117 LKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT D I+ +AE+ + P I+V + + Q V +K+K ++L+ ++ Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLD 236 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + + +VF RTK + L+E LN G + IHG+ +Q R L FK G I VLVA Sbjct: 237 IQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVA 296 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLDI + HV N+++P PE YVHRIGRTGRA G A+ V E L++IE Sbjct: 297 TDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIE 356 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 + K+++ R+ P + + I Q R ++ Sbjct: 357 RTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEMLEENDS 411 >UniRef50_A6M3F5 DEAD/DEAH box helicase domain protein n=5 Tax=Clostridium RepID=A6M3F5_CLOB8 Length = 525 Score = 593 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 159/398 (39%), Positives = 241/398 (60%), Gaps = 9/398 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +LGL I++A+++ G+ +P+ IQ+Q+IP L G DL+ AQTGTGKTA ++LP++ Sbjct: 6 FATLGLKESIVKAISDLGFTKPSQIQEQSIPVTLSGADLIGQAQTGTGKTAAYSLPIITK 65 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + R +++LIL PTRELA Q+ E ++ SKY I +L V+GG SI+ Q+ L Sbjct: 66 MSDN-------RGIKSLILAPTRELAVQVNEEIQRLSKYEKIVTLAVYGGDSIDRQIRAL 118 Query: 123 RGG-VDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 R G VD++V TPGR+LDL + + L+ +E LVLDEAD ML+MGFI DI+ +L+ P++R Sbjct: 119 RKGDVDIVVGTPGRILDLVKRKCLHLESIEFLVLDEADEMLNMGFIDDIQEILSHTPSER 178 Query: 182 QNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT D I LA+K + + + + R + ++ Q ++ K + E L ++ Sbjct: 179 QTLLFSATMPDPIAKLAKKYMKPDAKLVSIKRSSLTVSKIEQSYFMINNKHRLEALCRLL 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 N ++F RTK G + L ++L G +HG+ +Q R L FK G + +L+ Sbjct: 239 DLDNPSSAIIFCRTKRGVDELVQELQSKGYMVEGMHGDMTQAHRLTTLNKFKEGTLNLLI 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+D+E + HV NY+LP E YVHRIGRTGRA +G A SLV + +L+ I Sbjct: 299 ATDVAARGIDVEGVTHVFNYDLPQDVESYVHRIGRTGRANKSGTAYSLVTPKDFSMLKQI 358 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGG 398 + + K I + +P E + K + + + + G Sbjct: 359 QNVTKSSITQKPVPTAEEINNKKFKDMMSEVESTIKAG 396 >UniRef50_B7VQT9 ATP-dependent RNA helicase n=15 Tax=Bacteria RepID=B7VQT9_VIBSL Length = 523 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 243/447 (54%), Positives = 312/447 (69%), Gaps = 7/447 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF SLGLS IL+A+ QGY +P+PIQ++A+PAVL G+D+MA+AQTGTGKTAGFTLP+L Sbjct: 1 MSFTSLGLSEPILKAIEAQGYDKPSPIQEKAVPAVLTGKDVMAAAQTGTGKTAGFTLPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L + VRAL+LTPTRELAAQ+ +V Y L + S VVFGGV INPQM Sbjct: 61 EMLSKGPRVR--QNQVRALVLTPTRELAAQVNGSVVKYGINLPLTSTVVFGGVKINPQMQ 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KLR G DVLVATPGRLLDL +QNAV+ DQ+EILVLDEADRMLDMGFI DIR++L LP K Sbjct: 119 KLRKGSDVLVATPGRLLDLYNQNAVRFDQLEILVLDEADRMLDMGFIRDIRKILAFLPKK 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSATFSDDI++LA+ L++NP+EI V+ N+ + V Q ++ VDKK+K +L+ +I Sbjct: 179 RQNLLFSATFSDDIRSLAKGLVNNPVEISVSPANSTAPTVEQSIYPVDKKKKAPMLAKLI 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 +W+QVLVF++TKHGAN LA L + I SA IHGNKSQGART+AL +FK+G +RVLV Sbjct: 239 KDNDWRQVLVFSKTKHGANKLARFLEEQDITSAPIHGNKSQGARTKALENFKTGKVRVLV 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+DI +LP VVN++LPNV EDYVHRIGRTGRA G+A+SLVC DE L I Sbjct: 299 ATDIAARGIDIPQLPQVVNFDLPNVSEDYVHRIGRTGRAGEVGKAISLVCADEVGELFGI 358 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 E+L+++ + R + G+ P + + + + + + GQ+ G + Sbjct: 359 ERLIQQVLERRELEGFAPVNKLPESRLDSRPIKPKKPKKTREHSDGQRSGENARGHKPAG 418 Query: 421 SAKP-----AEKPSRRLGDAKPAGEQQ 442 K P R+ A + Sbjct: 419 KNKRHVAGNGSAPKRKPNSGNKASDSN 445 >UniRef50_C6WW85 DEAD/DEAH box helicase domain protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WW85_METML Length = 576 Score = 593 bits (1529), Expect = e-168, Method: Composition-based stats. Identities = 203/459 (44%), Positives = 273/459 (59%), Gaps = 7/459 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF+SL L+P ILRA+ E GY PTPIQ QAIP V+EG DLMASAQTGTGKTAGF LP L Sbjct: 1 MSFESLNLNPAILRAIEETGYTTPTPIQAQAIPVVMEGHDLMASAQTGTGKTAGFMLPAL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L T PH R R L+LTPTRELAAQ+ E R Y K+L R++ + GG+ Q Sbjct: 61 NLLAT--PHESRSRGPRILVLTPTRELAAQVNEAARKYGKFLRARTVSIVGGMPYPLQNK 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L +D+LVATPGRLLD + + L ++++L+LDEADRMLDMGF+ D+ R+ +L A+ Sbjct: 119 LLSQPLDILVATPGRLLDHMERGRIDLSRLQMLILDEADRMLDMGFLPDVERICEQLSAE 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK-RKRELLSHM 239 RQ LLFSAT DI +A+++L NP ++VA + + Q +HFVD K +LL H+ Sbjct: 179 RQTLLFSATLDGDIARIAQQILKNPKTVQVAAQKEKHANIEQRLHFVDDMTHKNKLLEHL 238 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + Q ++FT TK A+ LAE L G ++AA+HG+ +QGAR R L + GD++VL Sbjct: 239 LIAPEVNQTIIFTSTKRHADVLAEDLYAAGHKTAALHGDMTQGARNRTLTKLRHGDVKVL 298 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+ + HV+NY+LP EDYVHRIGRTGRA TG A+S + LLR Sbjct: 299 VATDVAARGIDVHGITHVINYDLPKFAEDYVHRIGRTGRANNTGIAISFASNMDRHLLRK 358 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQ--RGGGGRGQGGGRGQQQPRRGEGGA 417 IE+ + I G+EP +K + GR+ + GG G + +G Sbjct: 359 IEQYTGNRLEASVIEGFEPKRPVKMDGPSGGRRDGHKAGGRGGFKSRDDRGGFGGRDGNR 418 Query: 418 KSASAKPAEKPSRRLGDAKPAGEQ--QRRRRPRKPAAAQ 454 + +P+ + R R A + Sbjct: 419 GDNRGGSRHESRGDNRSERPSFNRDSNESRGNRDSAPRE 457 >UniRef50_A6T3R2 ATP-dependent RNA helicase n=86 Tax=Bacteria RepID=A6T3R2_JANMA Length = 778 Score = 592 bits (1528), Expect = e-168, Method: Composition-based stats. Identities = 170/485 (35%), Positives = 246/485 (50%), Gaps = 42/485 (8%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L LS +LR + E GY P+PIQ IP +L RD++ AQTGTGKTA F LP+L Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMK 121 + +Q +AL+L PTRELA Q+ E + Y+ Y+ L ++GG S Q+ Sbjct: 69 IDIKQT------TPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSA 122 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GV V+V TPGR++D + ++ L +++ +VLDEAD ML MGFI D+ +L K P R Sbjct: 123 LRRGVHVVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTPESR 182 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT IK +A L +P I VA + +D + Q V +K + L+ ++ Sbjct: 183 QTALFSATMPSAIKRIATTYLRDPDLITVAAKTGTADNIRQRYWLVSGMQKLDALTRILE 242 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 N+ +++F RTK G LA +L G +AAI+G+ Q R R + K G I +LVA Sbjct: 243 AENFDGMIIFARTKLGTEELASKLQARGFSAAAINGDIQQQQRERTIQQLKDGKIDILVA 302 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + HV+NY++P+ PE Y HRIGRTGRA +GEA+ + E LL+ IE Sbjct: 303 TDVAARGLDVERISHVINYDVPHDPESYTHRIGRTGRAGRSGEAILFIAPRERNLLKAIE 362 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGG----------------- 404 + ++ I + +P E ++ + + G + Sbjct: 363 RATRQPISVLELPSVEAVNDVRISRFKEQIAETIAAGGLEVFHSLIEDYEREHNVPAVEI 422 Query: 405 -----------------RGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRP 447 + + R K S E+ R +P R R Sbjct: 423 AAALAKLARGDVPLLLDKKNEVRERSWSDDKPVSGGRFERAERFERGDRPE-RGDRFERS 481 Query: 448 RKPAA 452 +PAA Sbjct: 482 ERPAA 486 >UniRef50_C5TNR4 Dead/deah box helicase n=8 Tax=Neisseriaceae RepID=C5TNR4_NEIFL Length = 487 Score = 592 bits (1528), Expect = e-168, Method: Composition-based stats. Identities = 212/453 (46%), Positives = 276/453 (60%), Gaps = 5/453 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F SLGL +++ A+ +QGY PTPIQ AIP L G DL+A+AQTGTGKTA F LP L+ Sbjct: 28 FSSLGLGSELVSALTDQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLEL 87 Query: 63 LI--TRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + PVR L+LTPTRELA QI +NV+ Y K L +R V+FGGV+++ Q Sbjct: 88 LKRYATSSTSPAMHPVRMLVLTPTRELADQIDQNVQAYIKNLPLRHTVLFGGVNMDKQTA 147 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR G +++VAT GRLLD Q + L++VEI+VLDEADRMLDMGFI DIR+++ LP + Sbjct: 148 DLRAGCEIVVATVGRLLDHVKQKNINLNKVEIVVLDEADRMLDMGFIDDIRKIMQMLPKQ 207 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSATFS I+ LA+ +H P +EVA +NT + V QH+ VD +KR LL +I Sbjct: 208 RQTLLFSATFSPPIRKLAQDFMHTPEMVEVAAQNTTNANVEQHIIAVDALKKRSLLERLI 267 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + QV+VF +TK + + L + I + +IHG+KSQ +R L FK G +RVLV Sbjct: 268 VDLHMNQVIVFCKTKQSVDQVTRDLVRRNIAAQSIHGDKSQQSRLETLNAFKEGTLRVLV 327 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI ELP V+NYELP PEDYVHRIGRTGRA A G A+SL+ E K+ I Sbjct: 328 ATDVAARGLDIAELPFVINYELPTQPEDYVHRIGRTGRAGADGVAISLMDKTEQKMFEAI 387 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 ++L ++ I G+EP QN + + R + R Sbjct: 388 KELTGSDLNVERIEGFEPHWWDN--DNQNEAEAQPVQHNDSRSRRDDRNKRNEYANKSDK 445 Query: 421 -SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAA 452 S K EK + K AG +R R R+P A Sbjct: 446 NSKKAEEKNDPGIVCGKIAGRTRRSRHERQPCA 478 >UniRef50_B7PA03 ATP-dependent helicase (DEAD box), putative n=1 Tax=Ixodes scapularis RepID=B7PA03_IXOSC Length = 685 Score = 592 bits (1527), Expect = e-167, Method: Composition-based stats. Identities = 148/469 (31%), Positives = 225/469 (47%), Gaps = 33/469 (7%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F ++ + Q Y PT IQ Q P L GRD++ AQTG+GKT + LP + Sbjct: 115 LTFQEGCFPDYCMKMIETQNYTTPTAIQSQGWPIALSGRDMVGIAQTGSGKTLAYILPAI 174 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + +G AL+L PTRELA QI + D+ K IR+ VFGG Q+ Sbjct: 175 VHITHQPYLQRGDG-PMALVLAPTRELAQQIQQVAADFGKASRIRNTCVFGGAPKGSQLR 233 Query: 121 ------KL-------------------RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVL 155 L R GV++ +ATPGRL+D V L + LVL Sbjct: 234 DWREFGALCPASVAVVQRNSQVIVVICRAGVEICIATPGRLIDFLEAGKVNLRRCTYLVL 293 Query: 156 DEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNT 215 DEADRMLDMGF IR+++ ++ Q L++SAT+ ++++LAE L + +++ + Sbjct: 294 DEADRMLDMGFEPQIRKIVEQIRPDCQTLMWSATWPKEVRSLAEDFLKDYIQVNIGALQL 353 Query: 216 -ASDQVTQHVHFVDKKRKRELLSHM---IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIR 271 A+ ++ Q V + K L + I + L+F TK + L ++ ++G Sbjct: 354 CANHRIVQIVDVCQESDKENKLMELHKEIINEQDNKTLIFAETKKKVDELTRRMRRNGWP 413 Query: 272 SAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVH 331 S IHG+KSQ R L +F+SG +LVATD+AARGLD++++ V+NY+ P+ EDY+H Sbjct: 414 SICIHGDKSQSERDWVLNEFRSGRSPILVATDVAARGLDVDDIRFVINYDYPHCSEDYIH 473 Query: 332 RIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGR 391 RIGRT R+ TG A + K +++ +LK+ I +E + G Sbjct: 474 RIGRTARSNKTGTAYTFFTPGNMKQAKELIAVLKEANQAINPKLFEIANMARNNSYGGG- 532 Query: 392 QQRGGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGE 440 R + R G S + + P G KP Sbjct: 533 --RNSESLPPYKLLQEPWGRESMQGTGPPSYQRSPAPQNGYGGPKPPQN 579 >UniRef50_Q24I45 DEAD/DEAH box helicase family protein n=2 Tax=Tetrahymena thermophila RepID=Q24I45_TETTH Length = 713 Score = 589 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 159/459 (34%), Positives = 244/459 (53%), Gaps = 6/459 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +S+ I+ V + +P+PIQ A P VL G DL+ A+TG+GKT F LP + Sbjct: 101 LSWTDTHFPQYIMNEVTHAKFEKPSPIQSLAFPVVLSGHDLIGIAETGSGKTLSFLLPSI 160 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + KG P+ L+L PTRELA QI + K ++ ++GG Q Sbjct: 161 VHINAQPTVKKGDGPI-VLVLAPTRELAMQIERESERFGKSSKLKCACIYGGADKYSQRA 219 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GVDV++ATPGRL+D L +V LVLDEADRMLDMGF IR++L ++ Sbjct: 220 LLQQGVDVVIATPGRLIDFLESETTTLRRVTYLVLDEADRMLDMGFEIQIRKILGQIRPD 279 Query: 181 RQNLLFSATFSDDIKALAEKLLHN-PLEIEVARRNTA-SDQVTQHVHFVDKKRKRELLSH 238 RQ L+FSAT+ +++ LA+ N P+ +++ + A ++++ Q V+ D+ +K L Sbjct: 280 RQTLMFSATWPKNVQNLAQDYCKNTPVYVQIGKHELAINERIKQIVYVTDQSKKINQLIK 339 Query: 239 MIG-KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + +VL+F +TK G ++ LNK+G + AIHG+K+Q R + FKSG+ R Sbjct: 340 QLDCLTQKDKVLIFAQTKKGCESMSRILNKEGFKCLAIHGDKAQKDRDYVMNKFKSGECR 399 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC-VDEHKL 356 +L+ATD+A+RGLD++++ HV NY+ P V EDYVHRIGRTGRA A G A+S + D+ K+ Sbjct: 400 ILIATDVASRGLDVKDVSHVFNYDFPKVMEDYVHRIGRTGRAGAYGCAVSFLTFEDDKKI 459 Query: 357 LRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 R+ ++L I I + Q + +P + Sbjct: 460 SREYVQMLHDAKQEIPIDLLDLASINPRYRTQYKTVSSSYYDIKKFNSADTSKPSENQNV 519 Query: 417 AKSASAKPAEKPSRRLGDAKP-AGEQQRRRRPRKPAAAQ 454 + +A++ S K E +R R R P ++ Sbjct: 520 SNTANSSDKYTSSSSYNQYKSKKDEDDKRSRSRSPYKSE 558 >UniRef50_C4XQY7 ATP-dependent RNA helicase n=7 Tax=Deltaproteobacteria RepID=C4XQY7_DESMR Length = 496 Score = 589 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 194/452 (42%), Positives = 269/452 (59%), Gaps = 8/452 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSFDS L ++ + GY PTPIQ +A+P V+EG DLM AQTGTGKTA F LP+L Sbjct: 1 MSFDSFCLHDSLIANIKRAGYETPTPIQAEAVPHVMEGHDLMGLAQTGTGKTAAFLLPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 LIT R R LIL PTRELA QI + D+ + +R+ V++GGV + PQ+ Sbjct: 61 HRLITNPART---RSPRTLILAPTRELAEQIFRSTLDFMRGTRLRATVIYGGVGMFPQVR 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR GVDV+VA PGRLLD +Q V+ D +E LVLDEAD M DMGF+ DI+R+L LPAK Sbjct: 118 ALRQGVDVIVACPGRLLDHLNQGNVRFDGLETLVLDEADHMFDMGFLPDIKRILAALPAK 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT I LA + L +P+ + + V ++ V +K LL H++ Sbjct: 178 RQTLLFSATMPPAISGLAAETLTDPVTVRIGHL-APLSTVEHAIYPVSHNQKAPLLLHLL 236 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 G+ + V+VFTRTKH A +LA+QL + G ++ + GN SQ R A+ F+ G ++LV Sbjct: 237 GEAGKESVIVFTRTKHRAKNLAQQLCRSGHKATCLQGNLSQRQRQIAMDGFRRGSFQILV 296 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ ++ HVVN+++P+ E Y HRIGRTGRA G+A + V ++ ++R I Sbjct: 297 ATDIAARGIDVSQVAHVVNFDIPDTAEAYTHRIGRTGRAERDGQAHTFVTGEDMGMVRAI 356 Query: 361 EKLLKKEIPRIAIPGYEPDP----SIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 E +KK +PR + G+EP+P P R ++G G QGG +Q+ G Sbjct: 357 ESHMKKPLPRRNVEGFEPEPGEFRRSAPAPRSAARPRQGYGAPRQGGYGDRQRQGDRPYG 416 Query: 417 AKSASAKPAEKPSRRLGDAKPAGEQQRRRRPR 448 + +P + D +P ++ R RP Sbjct: 417 DRPRGPRPEGARADSARDDRPRSDRPRSDRPA 448 >UniRef50_Q65N62 DEAD-box ATP-dependent RNA helicase cshA n=135 Tax=Firmicutes RepID=CSHA_BACLD Length = 487 Score = 589 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 152/385 (39%), Positives = 227/385 (58%), Gaps = 6/385 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F LS D+ +A+ G+ E TPIQ Q IP L +D++ AQTGTGKTA F +PL+ Sbjct: 3 ITFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLV 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + P ++A+++ PTRELA Q+ E + + R L ++GG I Q+ Sbjct: 63 EKINPESP------NIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIR 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ ++V TPGRLLD ++ ++L V +VLDEAD ML+MGFI DI +L+ +PA+ Sbjct: 117 ALKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAE 176 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT IK +AE+ + NP ++V + + Q V +++K + L+ ++ Sbjct: 177 HQTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLL 236 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + +VF RTK + L E LN G + IHG+ +Q R AL FK G I VLV Sbjct: 237 DIQSPELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLV 296 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI + HV N+++P PE YVHRIGRTGRA TG A++ + E +LR I Sbjct: 297 ATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAI 356 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAE 385 E+ K+++ R+ P + + + Sbjct: 357 EQTTKRKMDRMKAPTLDEAIEGQQQ 381 >UniRef50_D0MZ17 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MZ17_PHYIN Length = 2091 Score = 589 bits (1519), Expect = e-167, Method: Composition-based stats. Identities = 157/451 (34%), Positives = 239/451 (52%), Gaps = 6/451 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 + G S +L+ + + GY EP IQ+QA+PA++ GRD++ A+TG+GKT F LP+ +H Sbjct: 1492 WTQCGFSVRMLQLIKKHGYEEPFAIQKQALPAIMSGRDVIGIAKTGSGKTLAFLLPMFRH 1551 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 ++ + P + P+ +I+ P RELA QI R +SK L +R+ V+GG S++ Q+ L Sbjct: 1552 VLAQPPLQENEGPI-GIIMAPARELAQQIYVEARKFSKGLGLRATAVYGGSSVSEQIANL 1610 Query: 123 RGGVDVLVATPGRLLDLE---HQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 + G D+++ TPGR++D+ V L +V +VLDEADRM DMGF I +++ + Sbjct: 1611 KRGSDIVICTPGRMIDILCMSAGKMVSLQRVTYVVLDEADRMFDMGFEPQITKIMMNIRP 1670 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ LLFSATF +++LA K+L P+EI V R+TAS +TQ+V ++ K L + Sbjct: 1671 DRQTLLFSATFPRSVESLARKVLKKPVEITVGTRSTASGDITQYVEVREEDDKFMRLLQL 1730 Query: 240 IGK-GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 +G +LVF + + + + L K G + ++HG K Q R + DFK V Sbjct: 1731 LGLWYEKGNILVFVNKQQACDQIFQDLMKAGYPALSLHGGKDQVDRDYTIDDFKRKVRTV 1790 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 +VAT +A RGLD+++L V+NY PN EDYVHR+GRTGRA G A + + DE + Sbjct: 1791 MVATSVAGRGLDVKDLVLVINYHCPNHMEDYVHRVGRTGRAGRKGTAYTFISPDEEEYSV 1850 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAK 418 D+ K L+ I P ++ G + G G G + R Sbjct: 1851 DLVKALENAKQTIP-PELTALAEGFTAKVKRGEARYHGSGFKGKGFTFDETERNETQRTA 1909 Query: 419 SASAKPAEKPSRRLGDAKPAGEQQRRRRPRK 449 + E L + A + P K Sbjct: 1910 DLQRRQYELDQGILVEDSGAVDDDDMEEPSK 1940 >UniRef50_B4SPP3 DEAD/DEAH box helicase domain protein n=16 Tax=cellular organisms RepID=B4SPP3_STRM5 Length = 646 Score = 589 bits (1519), Expect = e-167, Method: Composition-based stats. Identities = 172/470 (36%), Positives = 252/470 (53%), Gaps = 23/470 (4%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F LGLS +++AV GY P+PIQ IPA+LEGRD++ AQTGTGKTA F LP+L Sbjct: 9 LQFAQLGLSESVMQAVTAIGYETPSPIQAATIPAMLEGRDVLGQAQTGTGKTAAFALPVL 68 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYS-KYLNIRSLVVFGGVSINPQM 119 ++ +Q +AL+L PTRELA Q+ E + YS K R L V+GG Q+ Sbjct: 69 SNIDLQQI------KPQALVLAPTRELAIQVAEAFQSYSSKIPGFRVLPVYGGQPYGQQL 122 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 LR GV ++V TPGR++D ++ + L +++ LVLDEAD ML MGFI D+ VL KLPA Sbjct: 123 SALRRGVHIVVGTPGRVIDHLDRSTLDLSELKTLVLDEADEMLRMGFIDDVEAVLKKLPA 182 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 KRQ LFSAT I+ +A+ L +P+E+ +A + T S + Q +V K + L+ + Sbjct: 183 KRQVALFSATMPPQIRRIAQTYLQDPVEVTIAAKTTTSANIRQRYWWVSGMHKLDALTRI 242 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + +++F RTK G LA +L G+ +AAI+G+ Q R R +A K G + +L Sbjct: 243 LEVEPFDAMIIFARTKAGTEELASKLQARGLAAAAINGDMQQAQRERTIAMLKEGKLDIL 302 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD+E + HV+NY++P E YVHRIGRTGRA +GEA+ E +LR Sbjct: 303 VATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFATPREKGMLRQ 362 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQ---------- 409 IE+ ++ I + +P E + + + G G + ++ Sbjct: 363 IERATRQPIEEMQLPSVEAVNDNRINKFTSRITETLGQGGLDFYRQLLERFETEQNVPAI 422 Query: 410 ------PRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAA 453 + +G P P + +R R + Sbjct: 423 EVAAALAKMMQGDTPFLLQPPVRAPREERAPRERFERTERPERGDRNERG 472 >UniRef50_Q17KA8 DEAD box ATP-dependent RNA helicase n=4 Tax=Eukaryota RepID=Q17KA8_AEDAE Length = 718 Score = 588 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 142/448 (31%), Positives = 235/448 (52%), Gaps = 7/448 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F G L + QG++EPT IQ + GRD++ A+TG+GKT + LP L Sbjct: 101 MQFGESGFPSVFLDEMGRQGFQEPTSIQAVGWSIAMSGRDMVGIAKTGSGKTLAYILPAL 160 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + +G P+ AL+L PTRELA QI + D+ + ++I + +FGG S +PQ Sbjct: 161 IHISNQPRLLRGDGPI-ALVLAPTRELAQQIQQVCNDFGRRMSIMNTCIFGGASKHPQAD 219 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR GV++++ATPGRL+D L + LVLDEADRMLDMGF IR++++++ Sbjct: 220 DLRRGVEIVIATPGRLIDFLESGTTNLRRTTYLVLDEADRMLDMGFEPQIRKIISQIRPD 279 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 RQ L++SAT+ +I+ LAE+ L ++I + N A++ + Q + ++ K L + Sbjct: 280 RQVLMWSATWPKEIRKLAEEFLREYIQINIGSLNLAANENIMQIIECCEEYEKETRLFKL 339 Query: 240 IGK---GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 + + + ++F TK + + + ++G R IHG+K+Q R L F+ Sbjct: 340 LTELSQQGDSKSIIFVETKRKVDQITNVIKRNGWRCDGIHGDKTQKDRDYVLNTFRRLRS 399 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 +LVATD+A+RGLD++++ +V+N++ PN EDY+HRIGRTGR+ G + + Sbjct: 400 GILVATDVASRGLDVDDVKYVINFDFPNNTEDYIHRIGRTGRSTNKGTSYTFFTPANGAK 459 Query: 357 LRDIEKLLKKEIPRI--AIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE 414 D+ +L++ + + Y + GGG + + G+G++ Sbjct: 460 AGDLIGVLREANQFVNPELEQYARSGGRNRSGGRGRYGGGGGGRQMRNDGKGRRGDDYRS 519 Query: 415 GGAKSASAKPAEKPSRRLGDAKPAGEQQ 442 G K A + G+ G + Sbjct: 520 GNGDDRGPKFARRDDYGSGNRNDYGSRN 547 >UniRef50_C5RIK3 DEAD/DEAH box helicase domain protein n=3 Tax=Clostridia RepID=C5RIK3_CLOCL Length = 536 Score = 588 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 154/393 (39%), Positives = 235/393 (59%), Gaps = 7/393 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ L L +IL+A+ + G+ EP+PIQ ++IP +EG DL+ AQTGTGKTA F +L Sbjct: 6 TFNELNLKDEILKAINDMGFEEPSPIQSESIPVGIEGYDLIGQAQTGTGKTAAFGSIILN 65 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 ++ + RR +ALIL PTRELA Q+ E + +K + + L ++GG I+ Q+ Sbjct: 66 NMSEK------RRVPQALILAPTRELAIQVNEELVRIAKNMRLNILPIYGGQPIDRQLRA 119 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GVD++V TPGR+LD + ++ + V+ LVLDEAD ML+MGFI DI V+ L R Sbjct: 120 LRNGVDIVVGTPGRVLDHLRRKSLNTEFVKFLVLDEADEMLNMGFIDDIEEVMKSLNEDR 179 Query: 182 QNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT D IK L+++ + + I + + + +TQ+ + + + E L +I Sbjct: 180 QTLLFSATMPDAIKRLSKRYMKSDAKLISIEKNTVTASTITQYYYEIKNSDRFESLCRII 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + ++F +TK G + L + + G +HG+ +Q R L FK ++ LV Sbjct: 240 DADEPEAAIIFCKTKKGVDELVSSMQRRGYVVEGMHGDMNQNQRMNTLKKFKESNLDFLV 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+D+E + HV+NY+LP E YVHRIGRTGRA G+A +LV E+ +L+ I Sbjct: 300 ATDVAARGIDVENVTHVINYDLPQDAESYVHRIGRTGRANKEGKAYTLVTPREYIVLKQI 359 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQ 393 EK K +I R ++P + +K + + N + Sbjct: 360 EKTTKSKIKRNSVPTVDEIYDVKYKNVLNKVRD 392 >UniRef50_C9RPH4 DEAD/DEAH box helicase domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RPH4_FIBSS Length = 486 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 211/456 (46%), Positives = 282/456 (61%), Gaps = 10/456 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+ L L+ + RAV GY PTPIQ+++IP++LEG+DL+ AQTGTGKTA F LP+L Sbjct: 1 MKFEELPLANPLQRAVRAVGYETPTPIQERSIPSLLEGKDLLGIAQTGTGKTAAFALPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L+ + + RALIL PTRELA Q+ + R+Y+++ I + +FGGV+ NPQ Sbjct: 61 QRLLDSGKF-RSPKTCRALILLPTRELAIQVEDCFREYAQFTAISTACIFGGVNDNPQKQ 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL GVDVLVATPGRLLDL Q A+ L ++E VLDEADRMLDMGFIHDIR+V+ LP Sbjct: 120 KLIRGVDVLVATPGRLLDLIGQKAISLKKLEFFVLDEADRMLDMGFIHDIRKVVAMLPQD 179 Query: 181 RQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQNL FSAT ++I LA +L NP+ +EVA ++T +++ Q ++ +DK+RK LL + Sbjct: 180 RQNLFFSATMPEEISKLAATILRPNPVRVEVAPQSTPIERIRQELYRIDKRRKGALLKEL 239 Query: 240 IGKG-NWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 + + ++VLVF RTKHGA+ + L K GI+ AAIHGNKSQ R AL +FK IRV Sbjct: 240 LAEHPEMKKVLVFCRTKHGADKIVRVLEKAGIKCAAIHGNKSQNRRQEALGNFKCEQIRV 299 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATDIAARG+D++++ HV NY+LPN E +VHRIGRT RA G A+S DE LR Sbjct: 300 LVATDIAARGIDVDDVSHVFNYDLPNEHETFVHRIGRTARAGKEGVAISFCSPDEESDLR 359 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAK 418 IEKL + +IP YE P + E ++ + G + + R G K Sbjct: 360 GIEKLTRVKIPEGDQSIYENLPPPQKETAESMMRNSRGRMSREEAQARAAETRNNRGNRK 419 Query: 419 SASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 K + + P +Q R P + Q Sbjct: 420 GNHGK-------QNSNNAPHNSEQISRNPAQNVTVQ 448 >UniRef50_A6VJ89 DEAD/DEAH box helicase domain protein n=5 Tax=Euryarchaeota RepID=A6VJ89_METM7 Length = 546 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 168/456 (36%), Positives = 254/456 (55%), Gaps = 13/456 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEG-RDLMASAQTGTGKTAGFTLPLL 60 SF +LGLS +I++A+ ++G+ PTPIQ+QAIP ++EG RD++ AQTGTGKTA F +P+L Sbjct: 3 SFKNLGLSDEIIKALEKKGFTNPTPIQEQAIPILIEGKRDVVGQAQTGTGKTAAFGIPIL 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + + R +ALIL PTRELA Q+ E + + V+GG SI+ Q+ Sbjct: 63 ETID------ESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIR 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L+ GV ++V TPGR+LD + +KL+ V +VLDEAD ML+MGFI D+ +L + + Sbjct: 117 ELKRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTE 176 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 ++ LLFSAT D I LA+ + I+V R+ + Q + + + K ELLS +I Sbjct: 177 KRMLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSYYEIHSRDKFELLSRII 236 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 L+F +TK + ++ +L + G + +HG+ +Q R + L FK+ I VLV Sbjct: 237 DVEKEFYGLIFCKTKADVDEISSRLTEKGYAAEGLHGDMTQAQREKTLDKFKARKINVLV 296 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+DI +L HVVNY++P PE YVHRIGRTGRA G A++ V E + + I Sbjct: 297 ATDVAARGIDINDLTHVVNYDIPQNPESYVHRIGRTGRAGKQGYAVTFVEPSEFRKFKYI 356 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 +K+ EI + +P + K I +G ++ G+ + + + Sbjct: 357 QKIANTEIRKEEVPDVKDIIGAKKRKIVSGIKELLESGKYNDCEKMAAELLEDADPQEVL 416 Query: 421 SA------KPAEKPSRRLGDAKPAGEQQRRRRPRKP 450 SA K S KPA + R R + Sbjct: 417 SAVLKYALKDELSESNYKRIGKPANREGRDRGEGRS 452 >UniRef50_A9KIB7 DEAD/DEAH box helicase domain protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIB7_CLOPH Length = 514 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 195/424 (45%), Positives = 281/424 (66%), Gaps = 5/424 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F+ + L +L+A+ E+G+ EP+PIQ++ IP VLEGRD++ AQTGTGKTA F LP+L Sbjct: 1 MNFNEMNLIKPLLQAIKEEGFIEPSPIQKKTIPLVLEGRDILGCAQTGTGKTAAFALPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L + VRALI+TPTRELA QI E+ + KY +++ V++GGV + Q+ Sbjct: 61 QSLSKGEGS-----GVRALIITPTRELAIQIYESFECFGKYTSLKQSVIYGGVGQSLQVN 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ G+D+L+ATPGRL DL Q + LD +E+ VLDEAD+MLDMGF++DI++V+ LP Sbjct: 116 SLKAGIDILIATPGRLNDLIGQGYITLDAIEMFVLDEADQMLDMGFLNDIKKVIKLLPKT 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT +I++LA LL+NP I+++ + D + Q V+FVD+ K LL+ +I Sbjct: 176 RQTLLFSATMPKEIESLATNLLNNPEIIKISPVTSTVDSIEQSVYFVDRLNKISLLTSLI 235 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +VLVFT+TKHGA+ +A++LNK +++ AIHG K Q AR AL+DFK G I+VLV Sbjct: 236 KEHKMSRVLVFTKTKHGADRVADKLNKAKVKTQAIHGGKGQNARQTALSDFKEGKIKVLV 295 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+DI EL +VVNY++PN E Y+HRIGRTGRA G A++L +D+ LR+I Sbjct: 296 ATDIAARGIDISELSYVVNYDIPNQAEIYIHRIGRTGRAGLGGNAINLCNIDDMDYLREI 355 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 EK + IP + +P++ R + G+ + +++ EG K+ Sbjct: 356 EKHIGMVIPEVPSKWPMLILEKTEKPVRGQRPENTTKNVGKESVKTEEKILLNEGAKKTK 415 Query: 421 SAKP 424 + K Sbjct: 416 AHKK 419 >UniRef50_Q0ST49 ATP-dependent RNA helicase, DEAD/DEAH box family n=23 Tax=cellular organisms RepID=Q0ST49_CLOPS Length = 528 Score = 587 bits (1515), Expect = e-166, Method: Composition-based stats. Identities = 149/384 (38%), Positives = 224/384 (58%), Gaps = 5/384 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + FD LGL +L+A+ + G+ EP+ IQ ++IP LEG D++ AQTGTGKTA F ++ Sbjct: 4 IKFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAII 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + ++ +ALIL PTRELA Q+ E + K+ + L ++GG I+ Q+ Sbjct: 64 NNAD----FSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIR 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GVD++V TPGR+LDL + ++ L+ + LVLDEAD ML+MGFI D+ ++ L Sbjct: 120 ALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTD 179 Query: 181 RQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ LLFSAT IK LA + + I + + + ++ Q + + + E L + Sbjct: 180 RQTLLFSATMPPQIKKLARNYMKEDTKHIAIKKSSLTVSKIEQFYFEIKHRDRFETLCRV 239 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++F +TK G + + E++ G +HG+ SQ R + L FK G + L Sbjct: 240 LDFDEPNAAIIFCKTKKGVDEVVEKMQARGYMVEGMHGDMSQNHRLQTLRKFKEGSLDFL 299 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+E + HV+NY+LP E YVHRIGRTGRA G A SLV E+ +L+ Sbjct: 300 VATDVAARGIDVESVTHVINYDLPQDNESYVHRIGRTGRANREGVAYSLVTPKEYMMLKQ 359 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIK 383 I+K K +I R A+P + K Sbjct: 360 IQKHTKSKIIRKAVPTVDEIFQNK 383 >UniRef50_D2MPZ3 Putative ATP-dependent RNA helicase RhlE n=1 Tax=Bulleidia extructa W1219 RepID=D2MPZ3_9FIRM Length = 425 Score = 587 bits (1515), Expect = e-166, Method: Composition-based stats. Identities = 175/431 (40%), Positives = 266/431 (61%), Gaps = 6/431 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F+ L +L ++A+ Y++P+PIQ++ IP +LEG DL+A AQTGTGKTA F LP+L Sbjct: 1 MTFNEFNLRKPLLDSLAKASYKKPSPIQEKGIPILLEGSDLIACAQTGTGKTATFALPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + H+ +RALILTPTRELA QI EN++ + +Y+++R+ V+GG PQ+ Sbjct: 61 NSLSKEKNHS-----IRALILTPTRELATQIFENIKMFGRYMHLRACCVYGGSPAAPQLK 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +R G D+L+ATPGRLLD + L +E LVLDEADRMLDMGFI D+R+++ ++P Sbjct: 116 AIRSGCDILIATPGRLLDYLAHGKISLRHIEFLVLDEADRMLDMGFIADVRKIVQQIPND 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 R LFSAT +I+ LA +L NP E+ + + + Q++ + +K K+++L +++ Sbjct: 176 RITALFSATMPKEIQELARDILKNPKEVRIEAEKFTASTIDQYLIYTEKSSKKKVLVNLL 235 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + ++ +VFTRTK GA+ L + L + I IHG+K+QG R AL F++ IR+L+ Sbjct: 236 NTESIKKTIVFTRTKIGADRLEKYLKEKEIACLVIHGDKTQGQRLNALQRFRTNQIRILI 295 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+DI+++ HV+N++LP E+YVHRIGRTGRA G ++SLVC +E LL +I Sbjct: 296 ATDVAARGIDIKDISHVINFDLPEDIENYVHRIGRTGRAKQEGVSISLVCKEELNLLANI 355 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 E ++ +IP Y K + + + R + ++ EG Sbjct: 356 ESYIQFQIPLKQN-LYSLPLERKKKRKSSIHKTTRKKERFSNQKKRSKKKSFHEGLIPQK 414 Query: 421 SAKPAEKPSRR 431 P K R+ Sbjct: 415 GISPKSKQKRK 425 >UniRef50_B1VFV5 ATP-dependent RNA helicase n=35 Tax=cellular organisms RepID=B1VFV5_CORU7 Length = 778 Score = 587 bits (1515), Expect = e-166, Method: Composition-based stats. Identities = 158/455 (34%), Positives = 247/455 (54%), Gaps = 11/455 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LGLSP++ AV G+ +P+PIQ+Q IP ++ G D++ AQTGTGKTA F LP+L Sbjct: 133 FGDLGLSPEVFDAVRAVGFTKPSPIQEQTIPLLMAGEDVVGLAQTGTGKTAAFALPILSR 192 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMMK 121 L + R +AL+L PTRELA Q+ E+ D+++ + + L ++GG Q+ Sbjct: 193 LNLK------SRKPQALVLAPTRELALQVAESFEDFAEKMGGVNILPIYGGQPYGAQLSG 246 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR G V+V TPGR++D + ++ + ++ +VLDEAD ML+MGF D+ R+L P + Sbjct: 247 LRRGAHVVVGTPGRVIDHLQKGSLDISELRFMVLDEADEMLNMGFQEDVERILEDTPEDK 306 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT I+ L+++ L++P E+ V ++ + Q V + K + L+ ++ Sbjct: 307 QVALFSATMPSAIRHLSKRYLNSPQEVTVKSTQRTAENIEQDYLIVHHREKLDALTRILE 366 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 ++ +++F RTK+ LAE+L G +AAI+G+ +Q R R + K G + +LVA Sbjct: 367 VTDFDAMIMFVRTKNDTEELAERLRARGYEAAAINGDIAQAQRERTVDQLKDGRLDILVA 426 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + HV NY++P E YVHRIGRTGRA +G A+ V E ++L+ IE Sbjct: 427 TDVAARGLDVERITHVFNYDIPRDTESYVHRIGRTGRAGRSGRAVLFVTPRERRMLKSIE 486 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG----GA 417 + K + I +P + + + + G Sbjct: 487 RATKSRLNEIELPSVDQVNEARKAKFNRELTKNLEDPQVSVFRDLVTTYAEANGVTLEDI 546 Query: 418 KSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAA 452 +A A A+ + L + P E +RR R A Sbjct: 547 AAALAAGAQGGEKFLMEEAPRREHKRRSDDRYGDA 581 >UniRef50_C4Q2M5 DEAD box ATP-dependent RNA helicase, putative n=2 Tax=Schistosoma mansoni RepID=C4Q2M5_SCHMA Length = 879 Score = 587 bits (1514), Expect = e-166, Method: Composition-based stats. Identities = 161/489 (32%), Positives = 243/489 (49%), Gaps = 47/489 (9%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F G I+ + + + PTPIQ Q P L GRDL+ AQTG+GKTA F LP + H Sbjct: 79 FSEAGFPSYIMSVIKKSKWDSPTPIQCQGWPVALSGRDLVGIAQTGSGKTASFLLPAIVH 138 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + +G P+ LIL PTRELA Q+ + D+ +S ++GG S Q L Sbjct: 139 AKAQPSLKRGDGPI-VLILVPTRELAQQVEKVAEDFCYSAGFKSACLYGGASRTGQAEAL 197 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 +V++ATPGRLLD + + LVLDEADRMLDMGF IRRV++++ RQ Sbjct: 198 GQSPEVVIATPGRLLDFLESRHTNMRRCTYLVLDEADRMLDMGFEPSIRRVVSQVRPDRQ 257 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMIG 241 L++SAT+ ++KALAE L++ ++I V +A+ + QHV +++ K + L ++ Sbjct: 258 TLMWSATWPREVKALAEDFLYDYIQINVGSTKLSANHNIRQHVEILNESEKFKRLLSLLN 317 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +VLVFT TK + L ++L G + A+HG+K Q R RAL F+ G I VLVA Sbjct: 318 SFDNARVLVFTETKKRTDELCQKLQDKGFDATAMHGDKHQKERDRALDMFREGHISVLVA 377 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+A+RGLDI ++ +++NY+ P+ EDY+HRIGRTGR+ G A + + +L R++ Sbjct: 378 TDVASRGLDINDVRYIINYDYPSQTEDYIHRIGRTGRSDKKGTAYTFFSAKQPRLARELI 437 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQ---------------------------- 393 ++LK+ I ++ E ++ Q Sbjct: 438 EVLKEARQTIPDELFKIAEGYYVERTRSSGQSYRRSRSGSSRSVSSGKRSISKRSRSSAS 497 Query: 394 --------------RGGGGRGQGGGRGQQQP---RRGEGGAKSASAKPAEKPSRRLGDAK 436 R + +G + R G G A S + + R G Sbjct: 498 RHSRSHSSRSGTSYRSRSPQTKGYHSRARSKSLSRNGNGAASDESKVSSPRERRSYGSHT 557 Query: 437 PAGEQQRRR 445 P + R + Sbjct: 558 PPKRKDRSQ 566 >UniRef50_A8SKI7 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SKI7_9FIRM Length = 580 Score = 587 bits (1514), Expect = e-166, Method: Composition-based stats. Identities = 140/397 (35%), Positives = 220/397 (55%), Gaps = 6/397 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ LS ++L+AV E G+ EP+PIQ+QAIP +L D++ AQTGTGKTA F +P+++ Sbjct: 4 NFNDFNLSKEVLKAVVEMGFEEPSPIQKQAIPTMLNNEDIIGQAQTGTGKTASFGIPIVE 63 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + K + +A++L PTREL+ Q+ E + +KY + + ++GG I Q+ Sbjct: 64 KVN------KNSKTTQAMVLCPTRELSIQVAEEISKLAKYKGVTVVPIYGGQPIERQIRS 117 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV V+V TPGR++D + +K + ++ VLDEAD M DMGF DI +++ LP +R Sbjct: 118 LKMGVQVIVGTPGRVIDHIKRKTLKTENIKTFVLDEADEMFDMGFREDIEKIIGFLPYER 177 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q FSAT ++ A + P I+V + +VTQ+ + K E+LS ++ Sbjct: 178 QTTFFSATMDHEMMDFAARYQSEPRLIKVVPKELTVPKVTQYYFALKHNMKLEILSRILD 237 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 N + +VF TK + L L G + +HG+ Q R + F++ I +LVA Sbjct: 238 VQNPKLTVVFCNTKKMVDDLTAGLQSRGYFADGLHGDLKQIQRDGVMNKFRNSTIDILVA 297 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARG+D++++ V+NY++P E YVHRIGRT RA G A+S V E L I+ Sbjct: 298 TDVAARGIDVDDVDLVINYDMPQDVEYYVHRIGRTARAGREGTAISFVSPREMNTLSQIQ 357 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGG 398 K K +I + +P + E ++ Sbjct: 358 KYTKTKIEKRDMPTLKDLIKRHEERFMEDIKEEINKN 394 >UniRef50_C6VX00 DEAD/DEAH box helicase domain protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VX00_DYAFD Length = 590 Score = 586 bits (1513), Expect = e-166, Method: Composition-based stats. Identities = 161/390 (41%), Positives = 239/390 (61%), Gaps = 7/390 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ LGL+ +IL+A+ E G+ +P+PIQ Q IPAVL+G D++ AQTGTGKTA F +P+L+ Sbjct: 8 TFEELGLNENILKALQEMGFEKPSPIQAQGIPAVLQGSDVIGQAQTGTGKTAAFGIPVLE 67 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 + T V+ALIL PTRELA Q+ E + SK++ +R ++GG SI+ Q+ Sbjct: 68 RIDT------SSNAVQALILCPTRELAVQVSEELGRLSKFMRGVRIEAIYGGDSIDRQIR 121 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GV ++V TPGR++D + +K D+V ++VLDEAD MLDMGF DI +L +P Sbjct: 122 SLKKGVHIVVGTPGRVMDHMERRTLKFDEVRMMVLDEADEMLDMGFREDIESILADMPED 181 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT S I ++ ++ L++P I+V R + + Q V + K E+++ +I Sbjct: 182 RQTILFSATMSKPIMSITKRFLNDPTLIKVVRNELTNQNIEQVYFEVKPQAKVEVMTRLI 241 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + +LVF TK + + E L G S IHG+ Q R+ ++ FK+G +LV Sbjct: 242 DMHHIKSLLVFCNTKRKVDEIVEDLQLRGYASEGIHGDLRQQQRSNVMSKFKAGVTTILV 301 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+D+ L V+NY++P E YVHRIGRTGRA +G+A SLV DE L+ I Sbjct: 302 ATDVAARGIDVSGLDGVINYDIPMDEEYYVHRIGRTGRAGMSGKAFSLVARDEKYRLKSI 361 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 E K +I + IP +E ++ Sbjct: 362 ESYTKVKIEKGVIPSFEDIVGVRKARFVEN 391 >UniRef50_B0SEU1 Superfamily II DNA and RNA helicase n=5 Tax=cellular organisms RepID=B0SEU1_LEPBA Length = 471 Score = 586 bits (1513), Expect = e-166, Method: Composition-based stats. Identities = 203/452 (44%), Positives = 283/452 (62%), Gaps = 12/452 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L L I +AVAE GY +PTPIQ QAIP +L+ DL+ AQTGTGKTA F LP++ Sbjct: 7 TFSDLKLDRYIQKAVAETGYTKPTPIQIQAIPLLLDNHDLLGCAQTGTGKTAAFALPMIH 66 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 +LI+ + + R+L+L PTRELA Q+ E+ Y KY IR+ V+FGGV NPQ Sbjct: 67 NLISTRA-KPNPKQPRSLVLVPTRELAIQVHESFVLYGKYTQIRTAVIFGGVGQNPQAKA 125 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 + G+DVL+ATPGRL+DL +QN V L +EI VLDEADRMLDMGFIHDIR++++ LP +R Sbjct: 126 IASGLDVLIATPGRLVDLMNQNLVSLKNLEIFVLDEADRMLDMGFIHDIRKIISYLPKRR 185 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 QNL FSAT +I+ LA +L P+ I+V ++ + ++Q V + + K+ LL H+ Sbjct: 186 QNLFFSATMPPEIEKLANSILVEPIRIDVTPVSSTVELISQSVMYTELADKKNLLLHLFK 245 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 N+++ ++FT+TKHGAN ++E LNK GI++ IHGNKSQ AR RAL DF+SG R LVA Sbjct: 246 DKNFKKTIIFTKTKHGANKISELLNKSGIKTDVIHGNKSQSARQRALEDFRSGKNRALVA 305 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARG+DI+++ HV+NYE+P VPE YVHRIGRT RA G A+++ DE L++DIE Sbjct: 306 TDLAARGIDIDDITHVINYEIPYVPETYVHRIGRTARAGKNGIAIAIAEADERSLIKDIE 365 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSAS 421 K++ IP + P R + G + G G R +S Sbjct: 366 KVIGISIPVD-----------RDHPYHAARVESHTGKAPKLHGSGGGGNRGQRRPTQSGD 414 Query: 422 AKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAA 453 + + + + + Q + RKP+ + Sbjct: 415 SSSGRNRNSQQNSKQNSNRSQGQSEKRKPSDS 446 >UniRef50_Q0D1K3 Pre-mRNA-processing ATP-dependent RNA helicase prp5 n=34 Tax=Dikarya RepID=PRP5_ASPTN Length = 1181 Score = 586 bits (1511), Expect = e-166, Method: Composition-based stats. Identities = 155/430 (36%), Positives = 242/430 (56%), Gaps = 11/430 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 + GL L + GY PT IQ QAIPA++ GRD++ A+TG+GKT F +P+ +H Sbjct: 551 WSQCGLGVQTLDVIDRLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTVAFLIPMFRH 610 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + ++P P+ LI+TPTRELA QI ++ + + K LN+R++ +GG I Q+ +L Sbjct: 611 IKDQRPLENMEGPI-GLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAEL 669 Query: 123 RGGVDVLVATPGRLLDLEHQ---NAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 + G +++V TPGR++DL L +V +VLDEADRM DMGF + +++ + Sbjct: 670 KRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANVRP 729 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ +LFSATF +++ALA K L+ P+EI V ++ + ++TQ V ++ +K L + Sbjct: 730 DRQTVLFSATFPRNMEALARKTLNKPVEIVVGGKSVVAPEITQIVEVRNEDKKFVRLLEL 789 Query: 240 I------GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKS 293 + + + L+F + A+ L +L + G +IHG K Q R + DFK+ Sbjct: 790 LGNLYSSDENEDARALIFVERQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKA 849 Query: 294 GDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDE 353 G VL+AT +AARGLD+++L VVNY+ PN EDYVHR GRTGRA TG A++ + D+ Sbjct: 850 GIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQ 909 Query: 354 HKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRG 413 + DI K LK+ ++ P + E ++ G+++ G G G Q R Sbjct: 910 ERFSVDIAKALKQSGQKVPEP-VQQMVDSFLEKVKAGKEKASASGFGGKGLERLDQERDA 968 Query: 414 EGGAKSASAK 423 + + K Sbjct: 969 ARMRERRTYK 978 >UniRef50_Q0AVQ9 ATP-dependent RNA helicase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AVQ9_SYNWW Length = 530 Score = 586 bits (1511), Expect = e-166, Method: Composition-based stats. Identities = 155/388 (39%), Positives = 236/388 (60%), Gaps = 10/388 (2%) Query: 1 MSFD---SLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTL 57 MSF+ S+GL D+L+ + E+G+ +PTPIQ ++IP + G DLM AQTGTGKTA F + Sbjct: 1 MSFENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGI 60 Query: 58 PLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINP 117 P+L +I + +AL+L PTRELA Q+ E + S+ + I+ L ++GG SI Sbjct: 61 PILNRVIKGEGL-------QALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIEL 113 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 Q+ LR +++V TPGRL+D ++ + L ++ +VLDEAD MLDMGF+ DI+++L++ Sbjct: 114 QLRSLRRNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQC 173 Query: 178 PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 P +RQ LFSAT D+++ L K + P I + ++ Q+ + V+ +RK E L Sbjct: 174 PRERQTFLFSATLPDEVRELGTKFMKQPEIILIESPERTVPEIEQYYYQVNSRRKIETLC 233 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 +I L+F RTK A+ LA L G + A+HG+ SQ R + F+ G+ + Sbjct: 234 RIIDAQQPPISLIFCRTKRNADELARVLTSRGYNADALHGDMSQRERDHVMHGFRQGNTK 293 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVATD+AARGLDIE + HV N+++P + Y+HR+GRTGRA +G A++LV + +LL Sbjct: 294 ILVATDLAARGLDIELVTHVFNFDIPEDLDSYIHRVGRTGRAGRSGIAITLVEPTQIRLL 353 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAE 385 R IE+ K I R +P + + Sbjct: 354 RMIERHTGKRIERALLPTLAEAVEKRQD 381 >UniRef50_D1INE6 Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) n=7 Tax=Eukaryota RepID=D1INE6_VITVI Length = 1180 Score = 585 bits (1509), Expect = e-165, Method: Composition-based stats. Identities = 162/440 (36%), Positives = 240/440 (54%), Gaps = 7/440 (1%) Query: 12 ILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAK 71 +L V G+ PTPIQ Q+ P L+ RD++A A+TG+GKT G+ +P HL ++ Sbjct: 33 LLFQVYSAGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHL--KRIRNN 90 Query: 72 GRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVA 131 + L+L+PTRELA QI + + + + ++GG PQ+ L G D++VA Sbjct: 91 PQMGPTVLVLSPTRELATQIQDEAVKFGRSSRLSCTCLYGGAPKGPQLRDLDRGADIVVA 150 Query: 132 TPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFS 191 TPGRL D+ V L QV LVLDEADRMLDMGF IR+++ ++PA+RQ L+++AT+ Sbjct: 151 TPGRLNDILEMRRVSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWP 210 Query: 192 DDIKALAEKLLHNPLEIEVARRN--TASDQVTQHVHFVDKKRKRELLSHMIGKGNWQ-QV 248 +++ +A LL NP+++ + + A+ +TQ+V + K + L ++ ++ Sbjct: 211 KEVRKIAADLLVNPVQVNIGNVDELVANKAITQYVEVLPYMEKHKRLEQILRSQEPGSKI 270 Query: 249 LVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARG 308 ++F TK + LA L + +AAIHG+KSQG R L F++G VLVATD+AARG Sbjct: 271 IIFCSTKKMCDQLARNLTRP-FGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARG 329 Query: 309 LDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEI 368 LDI+++ V+NY+ P EDYVHRIGRTGRA ATG A + + K D+ K+L+ Sbjct: 330 LDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLEGAN 389 Query: 369 PRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKP 428 R+ P S ++ R G GGR G G G G + Sbjct: 390 QRVP-PEIRDMASRGGGMGRSRRWGSGTGGRDGGRGGRNDSSYGGRDGGRGGWGMAPSSS 448 Query: 429 SRRLGDAKPAGEQQRRRRPR 448 SR +Q +R R R Sbjct: 449 SRLERGGGRGADQDQRDRDR 468 >UniRef50_B8ILJ8 DEAD/DEAH box helicase domain protein n=10 Tax=Alphaproteobacteria RepID=B8ILJ8_METNO Length = 506 Score = 584 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 226/492 (45%), Positives = 295/492 (59%), Gaps = 40/492 (8%) Query: 1 MS-FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPL 59 M+ F GL+ I++A+AE GY PTPIQ QA+P + GRDL AQTGTGKTA F LP+ Sbjct: 1 MTQFVDFGLAAPIMKALAETGYVTPTPIQAQAVPPAMTGRDLCGIAQTGTGKTAAFALPI 60 Query: 60 LQHLITRQPHAKG-RRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 L L + P + RR R L+L+PTRELA+QI ++ RDY K+L + VVFGGV+I Q Sbjct: 61 LHRLASETPAKRAPRRGCRVLVLSPTRELASQIADSFRDYGKFLPFSTTVVFGGVTIGRQ 120 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L G+DVLVATPGRLLDL + ++ LD VE LVLDEAD+MLD+GFIH ++R++T LP Sbjct: 121 ERALANGIDVLVATPGRLLDLVDRRSLSLDSVEYLVLDEADQMLDLGFIHALKRIVTLLP 180 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ+L FSAT +I LA + L +P+++ V T +++V Q V V K+ LL Sbjct: 181 KARQSLFFSATMPKNIATLAAQYLRDPVQVAVTPVATTAERVEQRVIHVSTGAKQALLGT 240 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + +VLVFTRTKHGA+ + L K GI SAAIHGNKSQ R RALA F++G RV Sbjct: 241 ILRDESIDRVLVFTRTKHGADRVVRGLEKVGIGSAAIHGNKSQPQRERALAAFRAGTCRV 300 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATDIAARG+D+E + HVVN++LPNVPE YVHRIGRT RA A G A+S +E LR Sbjct: 301 LVATDIAARGIDVEGVTHVVNFDLPNVPEAYVHRIGRTARAGADGLAISFCNEEERAYLR 360 Query: 359 DIEKLLKKEIPRIAIP-GYEP--DPSIKAEPIQNGRQQRGGGGRGQGGGRGQ-------- 407 DIE+L ++++P +AIP G+ P + R +R G RGQ GR Sbjct: 361 DIERLTRQKVPEMAIPVGFVPPSRQEAAEAVAEAERDRRQPGPRGQRPGRSHGARPQGGP 420 Query: 408 ----------------QQPRRGEGGAKSASAKPAE----------KPSRRLGDAKPAGEQ 441 + R +GG + A+P + G +P G Q Sbjct: 421 GGRPQGGRQHGQGGRPGEGRPRDGGRPAQEARPGRPAQDGRPAAHRAEGPKGHGRPQG-Q 479 Query: 442 QRRRRPRKPAAA 453 R R R PA Sbjct: 480 PHRDRGRAPAQG 491 >UniRef50_O97032 DjVLGB (Fragment) n=1 Tax=Dugesia japonica RepID=O97032_DUGJA Length = 781 Score = 583 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 165/429 (38%), Positives = 237/429 (55%), Gaps = 8/429 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD L L P I + Y+ PTPIQ+ AIPA+LE RD+MA AQTG+GKTA F +P++ Sbjct: 185 NFDELKLDPTIRNNILLASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTAAFLIPIIN 244 Query: 62 HL---ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 HL Q + LIL PTRELA QI + +S +RS VV+GG + Q Sbjct: 245 HLVCQDLNQQRYSKTAYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQ 304 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLT--K 176 + +++ G +LVATPGRL+D +N + L+ + +VLDEADRMLDMGF IR+++ Sbjct: 305 IREVQMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLDEADRMLDMGFEPQIRKIIEESN 364 Query: 177 LPA--KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRE 234 +P+ RQ L+FSATF +I+ LA L+N + + V R + SD + Q + ++ K Sbjct: 365 MPSGINRQTLMFSATFPKEIQKLAADFLYNYIFMTVGRVGSTSDSIKQEIIYMTDVEKLN 424 Query: 235 LLSHMIGKGNWQ-QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKS 293 L ++ +L+F TK GA+ LA L G ++IHG++SQ R AL+ F++ Sbjct: 425 YLKNIFNTTAPNTLILIFVETKKGADSLARFLLSKGYPVSSIHGDRSQVEREAALSMFRN 484 Query: 294 GDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDE 353 G +LVAT +AARGLDI + HV+NY+LP+ E+YVHRIGRTGR G A S Sbjct: 485 GQCPILVATAVAARGLDIPNVKHVINYDLPSDIEEYVHRIGRTGRLGNHGRATSFYVDKN 544 Query: 354 HKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRG 413 + + D+ LLK+ + +K +R R + G G + R+G Sbjct: 545 NNIAIDLVDLLKEANQIVPQWLSALADELKRNSTMGSNNKRHNQRRYKNGNFGGRDYRQG 604 Query: 414 EGGAKSASA 422 S Sbjct: 605 PSNVNMNSG 613 >UniRef50_A7IK90 DEAD/DEAH box helicase domain protein n=36 Tax=Alphaproteobacteria RepID=A7IK90_XANP2 Length = 559 Score = 583 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 210/463 (45%), Positives = 280/463 (60%), Gaps = 12/463 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF +LGL+ I+RA+ E + PTPIQ +AIP +L GRDL+ AQTGTGKTA F LP+L Sbjct: 38 SFSNLGLAEPIVRALTEAQHVTPTPIQAEAIPQILAGRDLIGIAQTGTGKTAAFALPILD 97 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L+ H + VRAL+L+PTREL+ QI EN + ++ NI + GGV + Q+ Sbjct: 98 RLVRHP-HRPEPKSVRALVLSPTRELSGQIVENFEKFGRHANISVSLAIGGVPMGRQIRA 156 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GVDVLVATPGRL+DL +AVKLDQVE+LVLDEAD+MLDMGF+H IR ++ +LP KR Sbjct: 157 LSRGVDVLVATPGRLIDLVENHAVKLDQVEVLVLDEADQMLDMGFVHAIRAIVRRLPHKR 216 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 +L FSAT I LA +L +P+ + V +D+V Q V VDK K +LL+ ++ Sbjct: 217 HSLFFSATMPHAIAELAGSMLRDPVRVAVTPVAKTADRVEQRVILVDKANKGQLLAEVLS 276 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + + LVF+RTKHGA+ + L K GI + AIHGNKSQ R R LA F+ G IR L+A Sbjct: 277 TEDIDRALVFSRTKHGADKVVRVLAKAGIAAEAIHGNKSQNQRDRVLAAFREGKIRTLIA 336 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TDIAARG+D+ + HV+N++LPNVPE YVHRIGRT RA G A+S +E LR IE Sbjct: 337 TDIAARGIDVTGVSHVINFDLPNVPESYVHRIGRTARAGREGIAISFCDHEERAFLRSIE 396 Query: 362 KLLKKEIP---------RIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRR 412 KL+K ++P R A+P EP + + G GR G+ + Sbjct: 397 KLIKMQLPSSDRRGAGTRFAVPELEPIILDERDETSERSDYIGRSGRQNPRGQRPRHGDE 456 Query: 413 GEGGAKSASAKPAEKPSRRLGDAKPAGE-QQRRRRPR-KPAAA 453 G +S + + E + +P GE + RP +P A Sbjct: 457 RSGEGRSRAPRSEEGRPQAARAHQPRGEGRPAGGRPEGRPDAG 499 >UniRef50_C5EJJ1 DEAD/DEAH box helicase domain-containing protein n=7 Tax=cellular organisms RepID=C5EJJ1_9FIRM Length = 572 Score = 583 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 157/388 (40%), Positives = 232/388 (59%), Gaps = 7/388 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + FD L L I+RA+ E G+ E +PIQ QAIP +EGRD++ AQTGTGKTA F +PLL Sbjct: 4 VKFDELQLDERIIRAITEMGFEEASPIQAQAIPVAMEGRDMIGQAQTGTGKTAAFGIPLL 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 Q + + ++A+IL PTRELA Q+ E +R +K++ + L ++GG I Q+ Sbjct: 64 QKVD------PKVKKLQAIILLPTRELAIQVAEEMRRLAKFMHGTKVLPIYGGQDIVKQI 117 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ G ++V TPGR++D + VK+D V +VLDEAD ML+MGF+ D+ +L++LP Sbjct: 118 RSLKDGTQIVVGTPGRVMDHMRRKTVKMDHVHTVVLDEADEMLNMGFLEDMETILSQLPE 177 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ L+FSAT I +A K +P+ + V ++ +VTQ+ + V K K E++ + Sbjct: 178 ERQTLMFSATMPQAIADIARKFQDDPVTVRVIKKELTVPKVTQYYYEVKPKNKVEVMCRL 237 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + +VF TK + L + L G + +HG+ Q R R + F++G +L Sbjct: 238 LDMYAPKLSIVFCNTKRQVDELVQALQGRGYFAEGLHGDLKQVQRDRVMGSFRNGRTDIL 297 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+ ++ V NY++P E YVHRIGRTGRA G+A SLV E LRD Sbjct: 298 VATDVAARGIDVGDVEAVFNYDVPQDDEYYVHRIGRTGRAGREGKAFSLVVGKEVYKLRD 357 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPI 387 I++ K +I AIP IK E + Sbjct: 358 IQRYCKTKIIPQAIPSLNDITEIKVEKV 385 >UniRef50_C1IBN1 DEAD-box ATP dependent DNA helicase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBN1_9CLOT Length = 526 Score = 583 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 153/386 (39%), Positives = 233/386 (60%), Gaps = 8/386 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F +LGL +L+++ + G+ +P+ IQ +AIP ++G DL+ AQTGTGKTA F ++ Sbjct: 4 IKFSNLGLKDTLLKSINDLGFEKPSQIQAEAIPVAIQGYDLIGQAQTGTGKTAAFGCGII 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + + A+IL PTRELA Q+ + ++ SKY ++ L V+GG I Q+ Sbjct: 64 NHISKKSGLS-------AIILAPTRELAIQVNDELKRLSKYDDLTILPVYGGDPITNQIR 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ V+++V TPGR+LD + +KLDQ++ LVLDEAD ML+MGFI D+ ++ +LP++ Sbjct: 117 ALKRNVNIVVGTPGRVLDHIKRGTIKLDQIKFLVLDEADEMLNMGFIDDLEDIIKQLPSE 176 Query: 181 RQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ LLFSAT D I+ LA++ + + I + + + ++Q+ V K + E L + Sbjct: 177 RQTLLFSATMPDQIRKLAKRYMKPDAKHISIKKTSMTVSTISQNFFEVSHKTRFEALCRV 236 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++F RTK G + L E + G +HG+ SQ R R L FK G + L Sbjct: 237 LDFDTPSSAIIFCRTKKGVDELVEGMQSRGYVVEGMHGDMSQAHRLRTLKKFKEGSLNYL 296 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+E + HV+NY+LP E YVHRIGRTGRA G A SLV E+ +L+ Sbjct: 297 VATDVAARGIDVEGITHVINYDLPQDVESYVHRIGRTGRANREGIAYSLVSPKEYSMLKQ 356 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAE 385 I+ + K +I R IP + K++ Sbjct: 357 IKSVTKSDISRKNIPTVNDIFNSKSK 382 >UniRef50_Q4TVV3 Probable ATP-dependent RNA helicase DDX46 n=18 Tax=Eumetazoa RepID=DDX46_DANRE Length = 1018 Score = 583 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 149/425 (35%), Positives = 238/425 (56%), Gaps = 5/425 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 ++ G+S +L A+ + Y +PTPIQ QAIPA++ GRDL+ A+TG+GKT F LP+ + Sbjct: 341 TWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFR 400 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ ++P + A+I+TPTRELA QI + + +SK L +R + V+GG I+ Q+ + Sbjct: 401 HILDQRPVGEAEG-PLAVIMTPTRELALQITKECKKFSKSLALRVVCVYGGTGISEQIAE 459 Query: 122 LRGGVDVLVATPGRLLDLE---HQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ G +++V TPGR++D+ + L +V +V+DEADRM DMGF + R++ + Sbjct: 460 LKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEADRMFDMGFEPQVMRIVDNVR 519 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ ++FSATF ++ALA ++L P+E++V R+ V QHV +++++K L Sbjct: 520 PDRQTVMFSATFPRTMEALARRILSKPVEVQVGGRSVVCSDVEQHVIVIEEEKKFLKLLE 579 Query: 239 MIGKGNW-QQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++G V++F + A+ L + L K ++HG Q R + DFK+G R Sbjct: 580 ILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACR 639 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVAT +AARGLD+++L VVNY PN EDYVHR GRTGRA G A + + + + Sbjct: 640 LLVATSVAARGLDVKQLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEGQARYS 699 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 DI K L+ + + + K + G+ + G G + + Sbjct: 700 GDILKALELSGSSVPAELEQLWTNFKEQQKAEGKIIKSSSGFSGKGFKFDETEHALANER 759 Query: 418 KSASA 422 K Sbjct: 760 KKLQK 764 >UniRef50_P19109 ATP-dependent RNA helicase p62 n=11 Tax=Eukaryota RepID=DDX17_DROME Length = 719 Score = 582 bits (1503), Expect = e-165, Method: Composition-based stats. Identities = 139/385 (36%), Positives = 221/385 (57%), Gaps = 8/385 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F + L +++ + QGY+ PT IQ Q P + G + + A+TG+GKT G+ LP + H Sbjct: 283 FSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVH 342 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + +QP +G P+ AL+L PTRELA QI + ++ +R+ VFGG QM L Sbjct: 343 INNQQPLQRGDGPI-ALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDL 401 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 + G ++++ATPGRL+D + L + LVLDEADRMLDMGF IR++++++ RQ Sbjct: 402 QRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 461 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMIG 241 L++SAT+ ++K LAE L N ++I + +A+ + Q V D+ K E L ++ Sbjct: 462 TLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLS 521 Query: 242 K-----GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 + ++++F TK ++L + G+R AIHG+KSQ R L +F+SG Sbjct: 522 DIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKS 581 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 +LVATD+AARGLD++ + +V+N++ P EDY+HRIGRTGR+ G + + + K Sbjct: 582 NILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQ 641 Query: 357 LRDIEKLLKKEIPRIAIPGYEPDPS 381 + + +L++ I P E Sbjct: 642 AKALVDVLREANQEIN-PALENLAR 665 >UniRef50_Q5JKF2 DEAD-box ATP-dependent RNA helicase 40 n=11 Tax=Viridiplantae RepID=RH40_ORYSJ Length = 792 Score = 582 bits (1503), Expect = e-165, Method: Composition-based stats. Identities = 160/419 (38%), Positives = 242/419 (57%), Gaps = 10/419 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF++ G P+IL+ + G+ PTPIQ Q+ P L+ +D++A A+TG+GKT G+ LP Sbjct: 151 SFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFM 210 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ ++ R L+L PTRELA QI E + + I S ++GG PQ+ Sbjct: 211 HI--KRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRD 268 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GVDV+VATPGRL D+ + L QV LVLDEADRMLDMGF IR+++ ++P +R Sbjct: 269 LDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRR 328 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRN--TASDQVTQHVHFVDKKRKRELLSHM 239 Q L+++AT+ +++ +AE LL +P+++ + + A+ +TQ+V + K L + Sbjct: 329 QTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQI 388 Query: 240 IGKGNWQ-QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 + + +VL+F TK + LA L + ++AIHG+KSQ R + L+ F+SG + Sbjct: 389 LRSQDSGSKVLIFCTTKRMCDQLARTLTRQ-FGASAIHGDKSQSEREKVLSHFRSGRSPI 447 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLDI+++ V+NY+ P EDYVHRIGRTGRA ATG A + C + K Sbjct: 448 LVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAA 507 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 D+ K+L+ R+ + + + GR++ R GG + R G Sbjct: 508 DLIKILEGANQRVP----RDLADMASRGGRGGRKRNRWATRSDRGGSHSELDSRYGGRD 562 >UniRef50_D2L498 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L498_9DELT Length = 492 Score = 582 bits (1502), Expect = e-165, Method: Composition-based stats. Identities = 199/454 (43%), Positives = 271/454 (59%), Gaps = 7/454 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSFDS L I + GY PTPIQ +AIP V EGRDLM AQTGTGKTA F LP++ Sbjct: 1 MSFDSFCLHATITENIKRLGYENPTPIQAEAIPHVTEGRDLMGLAQTGTGKTAAFLLPII 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L+T +R VRALIL PTRELA QI D + +R+ V++GGV + PQ Sbjct: 61 HRLMTT---KSEKRGVRALILAPTRELAEQIYRAGLDLGRGTRLRAAVIYGGVGMFPQTR 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR GVD++VA PGRLLD +Q V+ D +E LVLDEAD M DMGF+ DI+R+L+ LP++ Sbjct: 118 ALRQGVDIIVACPGRLLDHMNQGNVRFDALETLVLDEADHMFDMGFLPDIKRILSALPSE 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT I LA + L +P+ + + V ++ + +K LL H++ Sbjct: 178 RQTLLFSATMPPAISGLAHETLTDPVTVRIGHM-APLSTVEHAIYPISHTQKAPLLLHLL 236 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + Q V+VFTRTKH A +LA QL + G ++ + GN SQ R A+ F+ G +VLV Sbjct: 237 EEAGKQSVIVFTRTKHRAKNLALQLCRSGHKATCLQGNLSQRQRQIAMDGFRRGSFQVLV 296 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ ++ HVVN+++P+ E Y HRIGRTGRA G+A + V ++ ++R I Sbjct: 297 ATDIAARGIDVSQVGHVVNFDIPDTAEAYTHRIGRTGRAEHEGQAHTFVTGEDMGMVRAI 356 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 E +KK +PR + G+EPDPS + G +G GGR QQ RG+G + Sbjct: 357 ESHMKKPLPRREVEGFEPDPSEFRRSYAPAPRYPARGRQGGYGGRPQQGGYRGQGDRARS 416 Query: 421 SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 S +P + R +P G++ R R R + Sbjct: 417 SDRPQGE---RSFSERPQGDRPRDDRARPDTRTE 447 >UniRef50_Q9SQV1 DEAD-box ATP-dependent RNA helicase 40 n=14 Tax=Eukaryota RepID=RH40_ARATH Length = 1088 Score = 582 bits (1502), Expect = e-165, Method: Composition-based stats. Identities = 156/412 (37%), Positives = 235/412 (57%), Gaps = 7/412 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+S GL P+ILR + G+ PTPIQ Q P L+ RD++A A+TG+GKT G+ +P Sbjct: 435 ITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAF 494 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 ++ R R LIL PTRELA QI + + + I ++GG PQ+ Sbjct: 495 --ILLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLK 552 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L G D++VATPGRL D+ + QV +LVLDEADRMLDMGF IR+++ ++P + Sbjct: 553 ELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPR 612 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN--TASDQVTQHVHFVDKKRKRELLSH 238 RQ L+++AT+ +++ +A LL NP+++ + R + A+ +TQ+V V + K L Sbjct: 613 RQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQ 672 Query: 239 MIGKGNWQ-QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++ +V++F TK +HLA + + + IHG+K+QG R L F+SG Sbjct: 673 ILRSQERGSKVIIFCSTKRLCDHLARSVGRH-FGAVVIHGDKTQGERDWVLNQFRSGKSC 731 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 VL+ATD+AARGLDI+++ V+NY+ P EDYVHRIGRTGRA ATG A + + K Sbjct: 732 VLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYA 791 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQ-QRGGGGRGQGGGRGQQ 408 D+ K+L+ ++ + Q +RG R GG G + Sbjct: 792 PDLIKVLEGANQQVPPQVRDIAMRGGGGGGPGYSQDRRGMVNRFDSGGGGTR 843 >UniRef50_B2V9H9 DEAD/DEAH box helicase domain protein n=4 Tax=Hydrogenothermaceae RepID=B2V9H9_SULSY Length = 405 Score = 582 bits (1502), Expect = e-165, Method: Composition-based stats. Identities = 167/405 (41%), Positives = 256/405 (63%), Gaps = 8/405 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L LS + L+++ E GY +PT IQ++AIPAV+ G+DL+A AQTGTGKTA F +P+++ Sbjct: 7 TFKDLNLSKETLKSLDELGYSKPTEIQEKAIPAVMTGKDLVAQAQTGTGKTAAFGVPIVE 66 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + ++ V+ALIL PTRELA Q+ + +++ K + +L V+GG SI+ Q+ Sbjct: 67 KVN------PKQKKVQALILVPTRELAIQVAKEIKELGKNKKVYTLAVYGGKSISHQINF 120 Query: 122 LRGGVDVLV-ATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ G DV+V TPGR+ DL + + LD V++ VLDEADRML+MGFI DI +++ LP Sbjct: 121 LKKGSDVVVVGTPGRVRDLLERGVLNLDNVKMFVLDEADRMLEMGFIDDIEEIMSYLPED 180 Query: 181 RQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQNLLFSAT +I LAE+ L+ N I V +++ Q ++ V+ + K + L+ + Sbjct: 181 RQNLLFSATMPKEILDLAEEFLNENYETIRVKPDEVTVEKIKQIIYRVNPRDKFKKLTEV 240 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + ++V++FT+TK A+ LAE+LN++G ++AIHG+ SQ R L +F++G +++L Sbjct: 241 LSQNEAEKVIIFTQTKIEADELAERLNEEGFNASAIHGDFSQKKRETVLHNFRTGKLKIL 300 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLDI+ + V+NY LP E Y+HRIGRTGRA G A+S++ E K L++ Sbjct: 301 VATDVAARGLDIKGVDLVINYGLPRDAESYIHRIGRTGRAGREGTAISIMTPSEDKQLQN 360 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGG 404 I+K K I I + S + + + R + Sbjct: 361 IQKKTKANIEVINEAQEKKLSSAQKDKSSQKERSSRNQTRRRQRS 405 >UniRef50_B3L9V8 Helicase, putative n=6 Tax=Alveolata RepID=B3L9V8_PLAKH Length = 528 Score = 582 bits (1501), Expect = e-164, Method: Composition-based stats. Identities = 147/417 (35%), Positives = 236/417 (56%), Gaps = 10/417 (2%) Query: 4 DSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHL 63 +G +L+++ PTPIQ Q P L G+D++ A+TG+GKT F LP H+ Sbjct: 116 SKIGFPDYVLKSLKNNNIVTPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHI 175 Query: 64 ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLR 123 + + G P+ L+L PTRELA QI + +S IR+ +GGV + Q+ L+ Sbjct: 176 LAQPSLKYGDGPI-VLVLAPTRELAEQIRQECVKFSVESKIRNTCAYGGVPKSGQIYALK 234 Query: 124 GGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQN 183 GV +L+A PGRL+DL QN L +V LVLDEAD+MLDMGF IR+++ ++ RQ Sbjct: 235 QGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFEIQIRKIVEQIRPDRQT 294 Query: 184 LLFSATFSDDIKALAEKLLH-NPLEIEVARRNTAS-DQVTQHVHFVDKKRKRELLSHMIG 241 L++SAT+ ++++LA L P+ + V + ++ Q ++ +++ K L ++ Sbjct: 295 LMWSATWPKEVQSLARDLCKQQPIHVNVGSLTLTACRRIKQEIYLIEEHEKIANLKLLLQ 354 Query: 242 K--GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + +++VF TK A+ + + L DG+ + IHG+K Q R L DFK+G +L Sbjct: 355 RIFRDNDRIIVFVETKKNADFITKALRLDGVPALCIHGDKKQDERRWVLNDFKTGKSPIL 414 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 +ATD+A+RGLDI+++ +VVN++ PN EDYVHRIGRTGRA A G + + + D+++L RD Sbjct: 415 IATDVASRGLDIKDVKYVVNFDFPNQIEDYVHRIGRTGRAGAHGASFTFLTSDKYRLARD 474 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 + K+L++ +P P + N ++ G G+ P +G Sbjct: 475 LVKILRES--EQPVP---PQLEKISYTSANNPRRNPYYGYGRSSHNVNNIPLKGSNR 526 >UniRef50_C4QFR3 DEAD box ATP-dependent RNA helicase, putative n=2 Tax=Schistosoma RepID=C4QFR3_SCHMA Length = 944 Score = 581 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 161/414 (38%), Positives = 230/414 (55%), Gaps = 13/414 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF+ + L I V Y PTP+Q+ A+P + RDLMA AQTG+GKTA F LP+L Sbjct: 160 SFNDVELHQIIKENVTRAQYIHPTPVQKYALPIIAAKRDLMACAQTGSGKTAAFLLPILN 219 Query: 62 HLITRQPHAKGRRP-------VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVS 114 L ALIL PTREL++QI + R +S NI+ VV+GG S Sbjct: 220 MLFEDNHCENSDASALSCAVCPLALILAPTRELSSQIYDEARKFSYRSNIKPCVVYGGAS 279 Query: 115 INPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVL 174 I Q+ +L G ++LVATPGRL+D+ + V L+Q+ VLDEADRMLDMGF IRR++ Sbjct: 280 ILAQIRELSHGCNLLVATPGRLVDMVSRGKVSLEQIRFFVLDEADRMLDMGFEPQIRRIV 339 Query: 175 TK--LPA--KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK 230 + +P KRQ L+FSATF +I+ LA LH+ + + V R + ++ + Q V V K Sbjct: 340 EQHGMPPAGKRQTLMFSATFPKEIQTLARDFLHSYIFLAVGRVGSTNENIIQEVLNVADK 399 Query: 231 RKRELLSHMIGKGNWQ-QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALA 289 K ++L ++ + LVF TK GA+ LA+ L + +IHG++ Q R AL Sbjct: 400 DKPDMLVRLLQGKDPDGLALVFVETKRGADVLAKFLCQLNFPVTSIHGDRPQTEREHALQ 459 Query: 290 DFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLV 349 F+SG +L+AT +AARGLDI + HV+N++LP+ E+YVHRIGRTGR G A S Sbjct: 460 SFRSGRTPILIATAVAARGLDIPNVKHVINFDLPSDIEEYVHRIGRTGRMGQPGSATSFF 519 Query: 350 CVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGG 403 ++RD+ +LL++ + P E + + P + + Sbjct: 520 SEKNQNVVRDLVELLRESKQAVP-PWLEARVAYPSGPASRRNKNINSNVNKKNR 572 >UniRef50_A5UZK3 DEAD/DEAH box helicase domain protein n=8 Tax=Bacteria RepID=A5UZK3_ROSS1 Length = 467 Score = 581 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 184/450 (40%), Positives = 263/450 (58%), Gaps = 7/450 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSFDS P I + + GY PTPIQ+Q IP L+GRD++ AQTGTGKTA F LP+L Sbjct: 1 MSFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L+ R VRA+I+TPTRELA QI + KY +RS+ ++GGV Q+ Sbjct: 61 QRLMRGP-----RGRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQ 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +LR GV++ V PGRLLD + + L+ +++L+LDEAD+M DMGF+ D+RR+L PA+ Sbjct: 116 RLRRGVEIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDVRRILRLAPAQ 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT D I+ALA + L P I++ R + VT ++ V + K LL ++ Sbjct: 176 RQTMLFSATMPDAIRALAREALREPQTIQIGR-SAPVSTVTHAIYPVAEHLKTALLIELL 234 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + VL+FTRTKH A HL++ L + G R+ A+ GN SQ R AL F+SG ++LV Sbjct: 235 RHTDTGSVLIFTRTKHRAQHLSDTLARMGYRATALQGNMSQNRRQAALDGFRSGRYQILV 294 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ + HV+NY++P E Y HRIGRTGRAA TG+A +LV + ++R I Sbjct: 295 ATDIAARGIDVAHISHVINYDMPQTAEAYTHRIGRTGRAARTGDAFTLVTRSDTGMVRAI 354 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGG-GRGQGGGRGQQQPRRGEGGAKS 419 E+L+ + + R +PG++ + A ++ R R ++ R + Sbjct: 355 ERLIGEPLKRETVPGFDYHAAAPAHDARSDHAPRHHAMPRHYEPHSQDERDNRAPRRHDA 414 Query: 420 ASAKPAEKPSRRLGDAKPAGEQQRRRRPRK 449 + P RR + R +PR Sbjct: 415 QERRSDTAPRRRDVQEWRSDAAPNRHKPRS 444 >UniRef50_C8WFI7 DEAD/DEAH box helicase domain protein n=3 Tax=Zymomonas mobilis RepID=C8WFI7_ZYMMN Length = 506 Score = 581 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 195/455 (42%), Positives = 258/455 (56%), Gaps = 10/455 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF LGLS ++L+AVAE GY EPTP+Q AIP+VL RDL+A AQTGTGKTA F LP++ Sbjct: 15 MSFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMI 74 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + A R R+LIL PTRELAAQ+ EN Y KY + ++ GGV + Q Sbjct: 75 DILAHGRCRA---RMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQA 131 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GVDVL+ATPGRLLDL + + L E+LV+DEADRMLDMGFI DI + TKLP Sbjct: 132 ALEKGVDVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLDMGFIPDIETICTKLPTS 191 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT IK LA++ L NP +IE++R TA+ + Q + V + K++ L M+ Sbjct: 192 RQTLLFSATMPPAIKKLADRFLSNPKQIEISRPATANTLIDQRLIEVSPRSKKKKLCDML 251 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++F K LA L + G IHG+ SQ R L FK+G I VLV Sbjct: 252 RAEKDHTAIIFCNRKTTVRQLATTLEQQGFSVGQIHGDMSQPERGSELERFKNGQISVLV 311 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 A+DIAARGLD++ + HV N+++P P+DY+HRIGRTGR A+GEAL+ V + + + I Sbjct: 312 ASDIAARGLDVKGISHVFNFDVPTHPDDYIHRIGRTGRGGASGEALTFVTPADEEAITAI 371 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 EKL+ EIPR + A P ++ + PR+ ++ Sbjct: 372 EKLMGVEIPR------LGNRKKNAYPSKSEETVSPKQAKPVQEKSAASSPRKAPRKTETP 425 Query: 421 SAKPAEKPSRRLGD-AKPAGEQQRRRRPRKPAAAQ 454 P ++ D K + RP A Q Sbjct: 426 KKLPEDRLDSVESDFPKNQAPRNTASRPVSKARTQ 460 >UniRef50_P24346 Putative ATP-dependent RNA helicase an3 n=63 Tax=Eukaryota RepID=DDX3_XENLA Length = 697 Score = 581 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 162/425 (38%), Positives = 236/425 (55%), Gaps = 19/425 (4%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF + + I+ + Y PTP+Q+ AIP ++E RDLMA AQTG+GKTA F LP+L Sbjct: 222 SFHDVTMGEIIMGNIQLTRYTRPTPVQKHAIPIIIEKRDLMACAQTGSGKTAAFLLPILS 281 Query: 62 ------------HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVV 109 HL + + ++ +L+L PTRELA QI E R ++ +R VV Sbjct: 282 QIYADGPGDAMKHLQENGRYGRRKQFPLSLVLAPTRELAVQIYEEARKFAYRSRVRPCVV 341 Query: 110 FGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHD 169 +GG I Q+ L G +LVATPGRL+D+ + + LD + LVLDEADRMLDMGF Sbjct: 342 YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ 401 Query: 170 IRRVLTK--LPAK--RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVH 225 IRR++ + +P K RQ ++FSATF +I+ LA L + + V R + S+ +TQ V Sbjct: 402 IRRIVEQDTMPPKGVRQTMMFSATFPKEIQILARDFLDEYIFLAVGRVGSTSENITQKVV 461 Query: 226 FVDKKRKRELLSHMIGKGNWQQ-VLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGAR 284 +V++ KR L ++ LVF TK GA+ L + L +G +IHG++SQ R Sbjct: 462 WVEEMDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDR 521 Query: 285 TRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGE 344 AL F+SG +LVAT +AARGLDI + HV+N++LP+ E+YVHRIGRTGR G Sbjct: 522 EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL 581 Query: 345 ALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGG 404 A S + +D+ LL + + +P + + + + + R + G G Sbjct: 582 ATSFFNEKNINITKDLLDLLVEA--KQEVPSWLENMAYEQHHKSSSRGRSKSRFSGGFGA 639 Query: 405 RGQQQ 409 + +Q Sbjct: 640 KDYRQ 644 >UniRef50_A9GRX1 DeaD2 protein n=5 Tax=Bacteria RepID=A9GRX1_SORC5 Length = 478 Score = 581 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 223/411 (54%), Positives = 280/411 (68%), Gaps = 3/411 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L L +LRA+ +GY PTPIQQQAIP +LEG DL+ AQTGTGKTA F LP+L Sbjct: 1 MQFADLKLIEPLLRAIEAEGYSAPTPIQQQAIPPILEGNDLLGCAQTGTGKTAAFALPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L Q + +R L+LTPTRELAAQ+ E+ Y K L +R+ VVFGGV PQM Sbjct: 61 QRLA--QSGGPRQGGLRVLVLTPTRELAAQVAESFTTYGKNLGLRTAVVFGGVGQRPQME 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR GVDVLVATPGRLLDL Q +++ LVLDEADRMLDMGFIHDIRRVL LP + Sbjct: 119 ALRRGVDVLVATPGRLLDLCSQGIAPFGRLDTLVLDEADRMLDMGFIHDIRRVLAMLPER 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT DI LA +L +P+ +EVAR T ++ + Q V FV++ KR +L H++ Sbjct: 179 RQTLLFSATMPPDILKLANSILRSPVRVEVARIATTAENIDQRVVFVERSDKRAMLEHVL 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++ +VFTRTKHGAN + +QL++ I + AIHGNKSQGAR RALA FK G VLV Sbjct: 239 KDPALRRAIVFTRTKHGANRVVQQLSRARIEAVAIHGNKSQGARERALASFKQGTTSVLV 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+DI+++ HV+NY+LPN+PE YVHRIGRT RA A+G ALS +E L DI Sbjct: 299 ATDIAARGIDIDDISHVINYDLPNIPESYVHRIGRTARAGASGVALSFCDSEERAYLADI 358 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPR 411 E+L++K +P +A PG P I P Q + G+G+ G+G+ P+ Sbjct: 359 ERLIQKRLPLLADPGV-PVFQIDPRPAQQAQGHARPQGQGRPQGQGRPHPQ 408 >UniRef50_B4WCQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WCQ8_9CAUL Length = 510 Score = 581 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 206/460 (44%), Positives = 287/460 (62%), Gaps = 10/460 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+S+GL+ +L+A+A +GY +PTPIQ++AIP V++G+DL+ AQTGTGKTA F LP+L Sbjct: 17 TFESMGLNKALLQALASEGYTKPTPIQEKAIPDVMQGKDLLGIAQTGTGKTAAFALPILH 76 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L + A R R L+L+PTRELA QIG++ + Y +L R V+FGGV Q Sbjct: 77 RLAENR-IAPKPRTTRVLVLSPTRELATQIGDSFKAYGAHLGFRVAVIFGGVKYGAQERA 135 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G+D+LVA PGRLLD Q + L EILVLDEAD+MLD+GFI IR++++++PAKR Sbjct: 136 LQQGLDILVAAPGRLLDHIQQKNLDLSSTEILVLDEADQMLDLGFIKPIRQIVSRIPAKR 195 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 QNL FSAT +I LA +LL +P++++V ++T +++Q V V++ RKR LL+ M Sbjct: 196 QNLFFSATMPTEIGKLAGELLKDPVKVQVTPQSTTVQRISQSVVHVEQGRKRALLTEMFS 255 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + + LVFT+TKHGA+ +A L G+ + AIHGNKSQ R R L FK G +RVLVA Sbjct: 256 DPEYTRCLVFTKTKHGADKVAAYLEAGGVEAGAIHGNKSQPQRERTLDAFKKGKLRVLVA 315 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TDIAARG+D++ + HVVN+ELP+VPE YVHRIGRT RA A G A+S V DE KLL+DIE Sbjct: 316 TDIAARGIDVDGVSHVVNFELPHVPEAYVHRIGRTARAGADGTAISFVAGDEMKLLKDIE 375 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPR-------RGE 414 K+ +++IP I + + A + G ++ +GG R + Sbjct: 376 KVTRQKIPAIDRRNDKALGQLDATIMATGVGKKATMPEREGGERNEGGRGGRGRSRVPHR 435 Query: 415 GGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 G + + R PA R R P A + Sbjct: 436 DGVRPEGGGQPHRQRRARPGETPAA--PRPERAYNPLAGE 473 >UniRef50_D2QD85 DEAD/DEAH box helicase domain protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QD85_9SPHI Length = 643 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 150/386 (38%), Positives = 237/386 (61%), Gaps = 7/386 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F SL +SP++L+AV + G+ P+PIQ +AIP +L+GRD++ AQTGTGKTA F +P L Sbjct: 33 FSSLAISPELLQAVTDMGFISPSPIQAEAIPPILDGRDVIGQAQTGTGKTAAFGIPALDL 92 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMK 121 + + R V+ LIL PTRELA Q+ E ++ +KY IR ++GG SI Q+ Sbjct: 93 IDVQ------DRSVQTLILCPTRELALQVAEEIKKLAKYKRGIRIEAIYGGDSIERQIRS 146 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV +++ TPGR++D +N +KL+ V++++LDEAD MLDMGF DI +L ++P +R Sbjct: 147 LKSGVHIVIGTPGRVMDHMERNTLKLNNVKMMILDEADEMLDMGFREDIESILEEMPEER 206 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q +LFSAT S I + +K +P+ ++V ++ + + Q V K K E++ +I Sbjct: 207 QTILFSATMSKPIMQITQKFQKDPVLVKVVKKELTNVNIEQVYFEVKSKAKVEVMCRLID 266 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + + +LVF TK + + E L G ++ +HG+ Q R ++ F++G +LVA Sbjct: 267 MYDLKLLLVFCNTKRKVDEIVEDLQIRGYQAEGLHGDLRQAQRNNVMSKFRAGTTNILVA 326 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARG+D++++ V+N+++P E YVHRIGRTGRA +G A S V DE R+I+ Sbjct: 327 TDVAARGIDVDDVDAVINFDIPLDEEYYVHRIGRTGRAGKSGRAFSFVGRDEKYRFREIQ 386 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPI 387 K ++ + IP +E ++ Sbjct: 387 TYTKVKVEKGVIPSFEDIVGVRKARF 412 >UniRef50_C5SI45 DEAD/DEAH box helicase domain protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SI45_9CAUL Length = 605 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 204/483 (42%), Positives = 279/483 (57%), Gaps = 31/483 (6%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS +L + ++GY PTPIQ QAIP +L DL+ AQTGTGKTA F LP+L Sbjct: 3 TFKDLGLSASLLSTLEKEGYHTPTPIQAQAIPILLNKHDLLGIAQTGTGKTAAFALPILH 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+++ + R R L+L+PTRELA QI ++ + YSK L ++ +FGGV PQ Sbjct: 63 HILSNRII-PAPRSCRVLVLSPTRELATQIADSFKAYSKGLGLQIATIFGGVKYGPQYKA 121 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+GG+D+LVATPGRL+D Q + L VE LVLDEAD+MLDMGFI IR+V ++LPA+R Sbjct: 122 LQGGIDILVATPGRLIDHIEQKTIDLKAVEHLVLDEADQMLDMGFIKPIRQVASRLPAQR 181 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 QNL FSAT +I LA +LL NP ++E+ T +++VTQ V F++++RKR LLS + Sbjct: 182 QNLFFSATMPKEIAGLANELLTNPKKVEITPEATTAERVTQQVIFIEQQRKRALLSELYA 241 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + L+FTRTK GA+ +A L G+ +AAIHG+K+Q R RAL FK+G +R LVA Sbjct: 242 DEKLARTLIFTRTKRGADRVAAYLQAGGVEAAAIHGDKNQSQRERALQAFKAGRVRALVA 301 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TDIAARG+D++ + HV+NYELP V E YVHRIGRT RA G +++LV DE KLL+DIE Sbjct: 302 TDIAARGIDVDNVTHVINYELPFVAEAYVHRIGRTARAGKEGHSITLVADDERKLLKDIE 361 Query: 362 KLLKKEIPRIA-----------------------------IPGYEPDPSIKAEPIQNGRQ 392 ++ ++ IP + AE + + Sbjct: 362 RITRQRIPSWDRRKDQALKLLDEAILASGQTEKPKTPDRVVEKTARHLDPDAERVHKRSR 421 Query: 393 QRGGGGRGQGGGRGQQQPRRGEG-GAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPA 451 R +G GR R G K A AE+ +R + Sbjct: 422 NRPNRDERRGNGRDGDNSRGERTFGKKDAFGNRAERQARFERPERTERYDPMASDRAPTK 481 Query: 452 AAQ 454 A++ Sbjct: 482 ASR 484 >UniRef50_C4LJP9 ATP-dependent RNA helicase n=15 Tax=Bacteria RepID=C4LJP9_CORK4 Length = 823 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 145/377 (38%), Positives = 226/377 (59%), Gaps = 7/377 (1%) Query: 14 RAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGR 73 RAV + G+ P+PIQ IP + +GRD++ AQTGTGKTA F LP+L L + + Sbjct: 167 RAVKKVGFETPSPIQAATIPILAQGRDVVGLAQTGTGKTAAFALPILSRLD------RSQ 220 Query: 74 RPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMMKLRGGVDVLVAT 132 + +AL+L+PTRELA Q+ + ++++ +L + L ++GG S Q+ LR G ++V T Sbjct: 221 KKPQALVLSPTRELALQVADAFQEFADHLGGVHVLPIYGGQSYGIQLSGLRRGAHIVVGT 280 Query: 133 PGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSD 192 PGR++D + ++ L +++ LVLDEAD ML+MGF D+ R+L P +Q LFSAT Sbjct: 281 PGRVIDHLERGSLDLSELKYLVLDEADEMLNMGFQEDVERILADTPEHKQTALFSATMPA 340 Query: 193 DIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFT 252 I+ L+++ L +P E+ + + +D + Q V+ K + L+ ++ + +++F Sbjct: 341 SIRRLSKQYLEDPREVTIKSQQRTADNIHQQYLLVNHHYKLDALTRILEVTEFDAMIMFA 400 Query: 253 RTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIE 312 RTK LAE+L G +AAI+G+ +Q R R + + G + +LVATD+AARGLD+E Sbjct: 401 RTKQNTEELAEKLRARGFSAAAINGDMAQNQRERTVDQLRDGRLDILVATDVAARGLDVE 460 Query: 313 ELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIA 372 + HVVNY++P+ E YVHRIGRTGRA +GEA+ V E +LLR IE+ K I + Sbjct: 461 RISHVVNYDIPHDTESYVHRIGRTGRAGRSGEAILFVTPRERRLLRSIERATKSSIEEMQ 520 Query: 373 IPGYEPDPSIKAEPIQN 389 +P + + Sbjct: 521 LPTVDEVNETRKAKFAQ 537 >UniRef50_B9Y818 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y818_9FIRM Length = 556 Score = 580 bits (1496), Expect = e-164, Method: Composition-based stats. Identities = 155/399 (38%), Positives = 239/399 (59%), Gaps = 6/399 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+ L LSP++ RA+A+ GY E T IQ IP V+ G D++ +QTGTGKTA F +P++ Sbjct: 1 MKFNELNLSPEMSRAIADCGYTEATYIQSACIPVVMNGGDVIGQSQTGTGKTAAFAIPII 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 + L R+ +ALIL+PTRELA Q+ + +R ++KY IR++ V+GG I+ Q+ Sbjct: 61 EML-----EVTDRKRPQALILSPTRELAMQVCDEIRKFTKYKEGIRTVAVYGGQQISKQI 115 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 ++L+ G D++V TPGR+LD + ++ DQ +LVLDEAD ML+MGF DI V+ LP Sbjct: 116 LELKKGADIVVGTPGRVLDHIRRRTLRFDQCRVLVLDEADEMLNMGFREDIETVIEALPQ 175 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ +LFSAT I + + NP+ I+ + + ++ Q + K+ K+E+L + Sbjct: 176 QRQTVLFSATMPKPILEITSQYQTNPVHIKTPQTQINTPKIEQVYYVCPKEAKKEILMQL 235 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I N ++F TK + L L G +AA+HG+ Q RT + +FK G I +L Sbjct: 236 ISMQNPHLAMIFCNTKKMVDELTSDLVSKGYPAAALHGDMKQEMRTGVMDNFKKGKINIL 295 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D++ + V NY+LP E YVHRIGRTGRA G A++L+ + LRD Sbjct: 296 VATDVAARGIDVDSMDVVFNYDLPQESEYYVHRIGRTGRAGKEGLAVTLITARQKYALRD 355 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGG 398 +E+ + ++ + +P E I+ + ++ + R Sbjct: 356 LERTTRSKLTQKPLPSLEEVRKIRLDFLREDLEHRMTRD 394 >UniRef50_O00571 ATP-dependent RNA helicase DDX3X n=262 Tax=cellular organisms RepID=DDX3X_HUMAN Length = 662 Score = 579 bits (1495), Expect = e-164, Method: Composition-based stats. Identities = 160/423 (37%), Positives = 231/423 (54%), Gaps = 19/423 (4%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF + + I+ + Y PTP+Q+ AIP + E RDLMA AQTG+GKTA F LP+L Sbjct: 181 SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS 240 Query: 62 HLITRQPHA------------KGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVV 109 + + P + ++ +L+L PTRELA QI E R +S +R VV Sbjct: 241 QIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV 300 Query: 110 FGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHD 169 +GG I Q+ L G +LVATPGRL+D+ + + LD + LVLDEADRMLDMGF Sbjct: 301 YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ 360 Query: 170 IRRVLTK--LPAK--RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVH 225 IRR++ + +P K R ++FSATF +I+ LA L + + V R + S+ +TQ V Sbjct: 361 IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV 420 Query: 226 FVDKKRKRELLSHMIGKGNWQQ-VLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGAR 284 +V++ KR L ++ LVF TK GA+ L + L +G +IHG++SQ R Sbjct: 421 WVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR 480 Query: 285 TRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGE 344 AL F+SG +LVAT +AARGLDI + HV+N++LP+ E+YVHRIGRTGR G Sbjct: 481 EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL 540 Query: 345 ALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGG 404 A S + +D+ LL + + +P + + + + + R + G G Sbjct: 541 ATSFFNERNINITKDLLDLLVEA--KQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFG 598 Query: 405 RGQ 407 Sbjct: 599 ARD 601 >UniRef50_C8P265 DEAD/DEAH family ATP-dependent RNA helicase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P265_ERYRH Length = 594 Score = 579 bits (1494), Expect = e-164, Method: Composition-based stats. Identities = 158/415 (38%), Positives = 236/415 (56%), Gaps = 6/415 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F L L +I+RAV E+GY EPT IQ QAIP +L DL+A +QTGTGKTA F LP+L Sbjct: 17 MTFKELELEEEIVRAVTEKGYEEPTDIQSQAIPILLGNHDLLAQSQTGTGKTAAFGLPML 76 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 +T+ ++ +LIL PTREL Q+ E +R +SKY + V+GG I+ Q+ Sbjct: 77 S--LTQPGD---KKRTNSLILCPTRELCMQVAEEMRSFSKYKQGVNIACVYGGSPIDKQI 131 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ G D++VATPGRL+D + ++LD +VLDEAD ML+MGFI DI + + LP Sbjct: 132 RDLKRGADIVVATPGRLMDHIRRKTIRLDDCRHIVLDEADEMLNMGFIEDIEEIFSFLPE 191 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ FSAT +I L+EK L P I ++R N ++ Q + V+ + K +L + Sbjct: 192 ERQFAFFSATMPKEIVKLSEKFLVEPERITLSRNNLTVSRIKQIYYTVESRDKVDLTIQL 251 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++F TK + L QLNK G + +HG+ Q R+ ++ FK G + VL Sbjct: 252 LQLHKTSGTMIFCNTKKMVDELTTQLNKAGFPALGLHGDMKQEMRSMVMSRFKKGMVSVL 311 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 +ATD+AARG+D++ + V+NY++P E YVHRIGRTGRA G A++LV + ++ Sbjct: 312 IATDVAARGIDVDSMDVVINYDIPQELEYYVHRIGRTGRAGKEGLAITLVSRRQRYAIKQ 371 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE 414 IE+L I +P E + + + ++ +G+ + R Sbjct: 372 IERLSNSTIVETPLPTKEQLNDLMVDQLAREIRKWNDHEQGKLFNIAYEGLRNEN 426 >UniRef50_UPI00006CD03A P68-like protein, putative n=1 Tax=Tetrahymena thermophila RepID=UPI00006CD03A Length = 699 Score = 579 bits (1494), Expect = e-164, Method: Composition-based stats. Identities = 148/421 (35%), Positives = 231/421 (54%), Gaps = 24/421 (5%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAI-------------------PAVLEGRDL 41 + ++ I+ + + + EP PIQ Q + P VL G DL Sbjct: 194 IKWNETKFPKYIMSVIEDSKFSEPMPIQAQYVTNKKQKKKYKMYECSFIPFPIVLSGHDL 253 Query: 42 MASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKY 101 + AQTG+GKT F LP L H+ + P G P+ AL+L PTRELA QI E + Sbjct: 254 IGIAQTGSGKTLSFMLPALVHINAQDPVKPGEGPI-ALVLAPTRELANQIQEQCFKFGSK 312 Query: 102 LNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRM 161 I S+ V+GG Q +LR G D+++ATPGRL+D N + L +V LVLDEADRM Sbjct: 313 CKISSVCVYGGAPKIYQEKELRNGCDIVIATPGRLIDFLESNVIDLKRVTYLVLDEADRM 372 Query: 162 LDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLH-NPLEIEVAR-RNTASDQ 219 LDMGF IR+++ ++ RQ L+FSAT+ ++ LA H +P+ I++ N ++ Sbjct: 373 LDMGFEPSIRKIVGQIRPDRQTLMFSATWPQTVRRLALDFCHGDPIHIQIGDMENNVNND 432 Query: 220 VTQHVHFVDKKRKRELLSHMIGKGNW-QQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGN 278 + Q V +DK +K + + ++ + ++FT+TK + L++ L D IR+ IHG+ Sbjct: 433 IDQQVEIIDKSQKYDRVKEILSTMTRSDKTIIFTQTKKDCDDLSKALQTDNIRNICIHGD 492 Query: 279 KSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGR 338 KSQ R + + FK+G + L+ATD+A+RGLD++++ V+NY+ P EDYVHR+GRTGR Sbjct: 493 KSQRDRDKVMDLFKTGRVNTLIATDVASRGLDVKDIKLVINYDFPKQIEDYVHRVGRTGR 552 Query: 339 AAATGEALSLVCV-DEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGG 397 A A G+A+S + ++ K+ +++ +LK+ I+ E + N + Sbjct: 553 AGAQGKAISFLDQYEDKKISKELVDVLKQNNQEISQDLLELSEANYKGNYSNNYNKNRSS 612 Query: 398 G 398 Sbjct: 613 K 613 >UniRef50_Q5CQW8 Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+HELICc) n=4 Tax=Apicomplexa RepID=Q5CQW8_CRYPV Length = 702 Score = 579 bits (1494), Expect = e-164, Method: Composition-based stats. Identities = 170/470 (36%), Positives = 244/470 (51%), Gaps = 23/470 (4%) Query: 2 SFDSL-GLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 SF L G+ +L + Y PTP+Q+ +IP VL GRDLMA AQTG+GKTA F P++ Sbjct: 201 SFMELEGIHEILLDNIRRVKYERPTPVQKFSIPTVLNGRDLMACAQTGSGKTAAFLFPIV 260 Query: 61 QHLITRQPHAKGRRP---------VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFG 111 ++ P ++ AL+L+PTRELA Q E R + IR+ V++G Sbjct: 261 MKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPTRELAIQTYEESRKFCFGTGIRTNVLYG 320 Query: 112 GVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIR 171 G + Q+M L G D++VATPGRL DL + V L ++ L+LDEADRMLDMGF IR Sbjct: 321 GSEVRSQIMDLDRGSDIIVATPGRLRDLIDRGKVNLKLIKFLILDEADRMLDMGFAPQIR 380 Query: 172 RVLT--KLPAK---RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHF 226 ++ ++P RQ ++FSATF +I+ LA+ LHN + + V R S + Q V + Sbjct: 381 EIVEDSEMPHSLDGRQTVMFSATFPREIQQLAKDFLHNYIFLTVGRVGATSGSIVQRVVY 440 Query: 227 VDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTR 286 ++ K LL ++ + +VF K A+ + + L + +IHG++SQ R Sbjct: 441 AEEDHKPRLLVKLLLEQGEGLTVVFVEMKRRADQIEDFLIDQNFPAVSIHGDRSQQEREH 500 Query: 287 ALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEAL 346 AL F+SG +LVATD+AARGLDI + HV+N ++P +DYVHRIGRTGRA TG A Sbjct: 501 ALRLFRSGQRPILVATDVAARGLDIPNITHVINLDMPCNIDDYVHRIGRTGRAGNTGLAT 560 Query: 347 SLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQN--GRQQRGGGGRGQGGG 404 S V +LRD+ L++ ++ R +GG Q G Sbjct: 561 SFVNESNKPILRDLLAALEESGQDAP-EWFQDMVKSCTASFGRYGNRFNKGGVSSSQRGN 619 Query: 405 RGQQQ-----PRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRK 449 RG R +GG+ +S + S + G + R RK Sbjct: 620 RGLHSFGSVDIRSNQGGSNCSSVNSSYGYSGNNSSSGNQGSNNEQWRNRK 669 >UniRef50_C5CGQ2 DEAD/DEAH box helicase domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGQ2_KOSOT Length = 524 Score = 578 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 156/388 (40%), Positives = 226/388 (58%), Gaps = 7/388 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F +GLS +L ++ + G+ EPTPIQ +AIP +L GRD++ A TGTGKTA F +PLL Sbjct: 3 MNFSEMGLSRKMLNSIEKVGFVEPTPIQSKAIPVILNGRDIIGQAHTGTGKTAAFGIPLL 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 + L + V+ALIL PTRELA Q+ + + I L ++GG SI Q+ Sbjct: 63 EMLDY------SSKKVQALILCPTRELAVQVAREIAALASNRKEIEVLAIYGGQSIERQI 116 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ G+ V+V TPGR++D + +KLD + +VLDEAD ML+MGF+ DIR +L+ + Sbjct: 117 NTLKKGIQVVVGTPGRIMDHMRRKTLKLDDTKFVVLDEADEMLNMGFLEDIRYILSHVGK 176 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ +FSAT I ALA++ P I+V R V Q+ + + RK + LS + Sbjct: 177 ERQITMFSATMPKAIIALAQEFQKEPELIKVINRELTVSTVEQYYLEIGESRKFDALSKL 236 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I N Q LVF TK + L L G +HG+ SQ R R + F++ I+VL Sbjct: 237 IEYYNPQLSLVFCNTKKKVDELVPMLQAKGYLVDGLHGDMSQSLRNRVMNSFRNKSIKVL 296 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D++++ V NY++P E YVHRIGRTGRA TG+A S LR+ Sbjct: 297 VATDVAARGIDVDDIEAVFNYDIPQDEEYYVHRIGRTGRAGKTGKAFSFAYGRSLHRLRE 356 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPI 387 I++ K +I + +P + + + E Sbjct: 357 IQRYTKIKIKSLNVPSEKDVNTKRMESF 384 >UniRef50_A0RP33 Putative ATP-dependent RNA helicase RhlE n=2 Tax=Campylobacter fetus RepID=A0RP33_CAMFF Length = 624 Score = 577 bits (1489), Expect = e-163, Method: Composition-based stats. Identities = 209/433 (48%), Positives = 289/433 (66%), Gaps = 5/433 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F LS IL A+ E Y PT IQQ AIPA+++G+D++A A+TGTGKTA F LP+L Sbjct: 1 MLFSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L +++ + K R L+L PTRELA Q+ +N++ Y+K L ++L VFGGVS PQ+ Sbjct: 61 EKLSSKERNKKRP-QTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQ 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ G+D++VATPGRLLDL QNA+ L+ ++ LV DEADRM DMGFIHDI++++ LP K Sbjct: 120 ALKSGIDIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLPEK 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSAT+ ++ +L +L +PL I++ +N+ + + Q V VD+ +K ELL+ + Sbjct: 180 RQNLLFSATYPSEVMSLCNSMLKDPLRIQIEEQNSTALNIIQRVILVDRDKKMELLNEVF 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 G + Q LVFTRTK A+ + L+ G AA+HG+KSQ R++ L FK+G ++LV Sbjct: 240 GVESIDQALVFTRTKRSADKCSSYLHTLGFSVAALHGDKSQSVRSKTLEKFKNGKTKILV 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARGLDI+ELP V+N ELPNVPEDYVHRIGRTGRA G A+SLVCVDE K L DI Sbjct: 300 ATDIAARGLDIKELPFVINLELPNVPEDYVHRIGRTGRAGNDGVAISLVCVDEFKFLIDI 359 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGG----RGQQQPRRGEGG 416 EKL+ K++ R + G+E D +K +PI+ G+ R G + +++PR Sbjct: 360 EKLIDKKLIRESFSGFEADLRVKPQPIRRGQNMNKSSERDDRNGNKIDKKERKPREFNSD 419 Query: 417 AKSASAKPAEKPS 429 K S + + Sbjct: 420 KKDESKRGRNRDD 432 >UniRef50_D1I3Q7 Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1I3Q7_VITVI Length = 916 Score = 577 bits (1489), Expect = e-163, Method: Composition-based stats. Identities = 157/383 (40%), Positives = 226/383 (59%), Gaps = 13/383 (3%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F + L + + + Y +PTPIQ+ AIP + GRDLMA AQTG+GKTA F P++ Sbjct: 423 FAEIHLGEGLNQNIRRCKYVKPTPIQRHAIPIAMAGRDLMACAQTGSGKTAAFCFPIICG 482 Query: 63 LITRQPHAKGRR--PVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 ++ Q G R ALIL+PTREL+ QI E + +S ++ +V +GG I+ Q Sbjct: 483 ILRNQLSRGGARLACPTALILSPTRELSCQIHEEAKKFSYKTGLKVVVAYGGAPISQQFR 542 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL--- 177 L GVD+LVATPGRL+D+ + V L ++ L LDEADRMLDMGF IR+++ ++ Sbjct: 543 NLERGVDILVATPGRLVDMIERARVSLRMIKYLALDEADRMLDMGFEPQIRKIVEQMDMP 602 Query: 178 -PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELL 236 P RQ +LFSATF ++I+ LA L N + + V R +++D + Q V FV+ KR L Sbjct: 603 PPGARQTMLFSATFPNEIQRLAADFLSNYIFLSVGRVGSSTDLIVQRVEFVEDTDKRYHL 662 Query: 237 SHMIGKG-------NWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALA 289 ++ + LVF TK G + L + L +G+ + AIHG+K Q R RAL Sbjct: 663 MDLLQSQMTNRTPKKYALTLVFVETKRGVDALEQWLCMNGLAATAIHGDKVQMERERALK 722 Query: 290 DFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLV 349 FKSG ++VATD+AARGLDI + HV+N++LP +DYVHRIGRTGRA +G A + Sbjct: 723 SFKSGATPIMVATDVAARGLDIPHVAHVINFDLPKAIDDYVHRIGRTGRAGKSGLATAFF 782 Query: 350 CVDEHKLLRDIEKLLKKEIPRIA 372 L + + +L+++ + Sbjct: 783 NDGNLSLAKSLVELMQESNQEVP 805 >UniRef50_D2NRF7 Superfamily II DNA and RNA helicase n=3 Tax=Bacteria RepID=D2NRF7_9MICC Length = 732 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 151/391 (38%), Positives = 227/391 (58%), Gaps = 1/391 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F LGL +L A+ E GY +P+PIQ+Q IP +LEG D++ AQTGTGKTA F LP L Sbjct: 61 VRFTDLGLDARVLAALEEVGYEKPSPIQEQTIPLLLEGHDVVGLAQTGTGKTAAFALPAL 120 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 + R + L+L PTRELA Q+ E Y+ ++ + L ++GG PQ+ Sbjct: 121 SRMAELADINGVSRDTQVLVLAPTRELALQVAEAFSSYATHMEDFTVLPIYGGSPYGPQL 180 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 LR G V+V TPGR++D + ++ L ++ LVLDEAD ML MGF D+ ++L P Sbjct: 181 AGLRRGAQVVVGTPGRVIDHLEKGSLDLSNLQYLVLDEADEMLRMGFAEDVEKILEGTPD 240 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +Q LFSAT + I+ +A++ L++P E+ V + T S ++Q V K + ++ + Sbjct: 241 SKQVALFSATMPNSIRKIAQQYLNDPREVRVKAKTTTSSNISQRYMQVMHSHKLDAMTRV 300 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + N+ ++VF RTK +A++L G +AAI+G+ Q R R + + G I +L Sbjct: 301 LEVENYDGIIVFVRTKKETEEVADKLKARGFAAAAINGDIPQQLRERTVDALRDGRIDIL 360 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD+E + VVNY++P+ E YVHRIGRTGRA G A+ V E +LR Sbjct: 361 VATDVAARGLDVERISLVVNYDIPHDTESYVHRIGRTGRAGREGAAILFVTPREKYMLRQ 420 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 IEK ++++ + +P E + + Sbjct: 421 IEKATRQKVEPMHMPTAEAVNETRKQRFAQQ 451 >UniRef50_A9NFK0 ATP-dependent RNA helicase, superfamily II n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFK0_ACHLI Length = 448 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 204/404 (50%), Positives = 262/404 (64%), Gaps = 8/404 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L + I +A+ GY PT IQ+QAIP +L G+DL+ SAQTGTGKTA F +P+L Sbjct: 1 MKFSELNIIERIQKALTLSGYEAPTAIQEQAIPILLSGQDLLGSAQTGTGKTAAFAIPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q + + H K R V+ALILTPTRELA QI ENV+ Y+KYLNI S ++GGVS Q Sbjct: 61 QKIYETKEH-KAPRKVQALILTPTRELALQIHENVKIYAKYLNIISTTIYGGVSQKRQEE 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GVDV++ATPGRLLDL +Q + L V LVLDEAD+MLDMGFI D+ ++ K P K Sbjct: 120 ALKRGVDVVIATPGRLLDLMNQKIISLQDVRYLVLDEADQMLDMGFIKDVTSIVDKTPKK 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT I+ L++++L NP I V D +TQ V+ V+K K LL +I Sbjct: 180 RQTMLFSATMPKQIEVLSKQILVNPERIAVTPVTQTLDAITQSVYMVNKANKTLLLIDLI 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 N + VLVFT+TKHGAN L + L GI S IHG+KSQ AR RALA+FK G ++LV Sbjct: 240 YTLNMKSVLVFTKTKHGANKLVKNLMNLGIESEPIHGSKSQAARERALANFKKGKTKILV 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+DIE L +V+N+ELP VPE Y+HRIGRTGRA +G ALSLV E KLL + Sbjct: 300 ATDIAARGIDIEALDYVINFELPEVPETYIHRIGRTGRAGLSGMALSLVDPSEQKLLTQV 359 Query: 361 EKLLKKEI-------PRIAIPGYEPDPSIKAEPIQNGRQQRGGG 397 EK + +I + P + K + + +Q++ Sbjct: 360 EKHINSKIEAVGHKYQIQSQPKQREVITDKLKTDTSKKQEKPKK 403 >UniRef50_C7JBN9 DNA/RNA helicase n=19 Tax=cellular organisms RepID=C7JBN9_ACEP3 Length = 636 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 190/437 (43%), Positives = 260/437 (59%), Gaps = 3/437 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F L LS ILRA+++ GY PTPIQ+QAIPA+L RD+M AQTGTGKTA FTLP+L Sbjct: 155 VTFADLELSEPILRAISDMGYTHPTPIQEQAIPAILMARDVMGVAQTGTGKTASFTLPML 214 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L + A R R+LIL PTRELA Q+ EN +Y KYL + ++ GG S+ Q Sbjct: 215 EILSDSRARA---RMPRSLILEPTRELALQVAENFVNYGKYLKLNHALLIGGESMADQKE 271 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GVDVL+ATPGRLLDL + + L+ ILV+DEADRMLDMGFI DI +++ LP Sbjct: 272 VLNRGVDVLIATPGRLLDLFERGGLMLNHTGILVIDEADRMLDMGFIPDIEKIVGLLPPN 331 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT + I+ LA+ LH+P EI VAR+++ + +T + VD+ KRE L ++ Sbjct: 332 RQTLLFSATMAPTIRKLADAFLHSPKEITVARQSSVATTITTGIVVVDEYSKRETLRQLL 391 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 Q +VF K + L + L K G +AA+HG+ Q R L FK+ +++VLV Sbjct: 392 KDPALQNAIVFCNRKRDVDILTKSLVKHGFSAAALHGDLPQSVRFSTLEKFKNDELKVLV 451 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 +D+AARG+DI L HV N++LP EDYVHRIGRTGRA G A S+ + L I Sbjct: 452 CSDVAARGIDIGGLSHVFNFDLPFHAEDYVHRIGRTGRAGREGHAYSIATPYDKALAEAI 511 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 EKL KEIPR+A+ G + + GR ++ + + + Sbjct: 512 EKLTGKEIPRMALDGVKQLEWSDEKRPPAGRTRKPRTPQRERENAVPTPREQQPEAKPQQ 571 Query: 421 SAKPAEKPSRRLGDAKP 437 +A+P +P+R + Sbjct: 572 TARPERQPTRNTRHQRD 588 >UniRef50_Q1AG34 Ded1-like DEAD-box RNA helicase n=3 Tax=Coelomata RepID=Q1AG34_CHITE Length = 776 Score = 576 bits (1486), Expect = e-163, Method: Composition-based stats. Identities = 162/438 (36%), Positives = 245/438 (55%), Gaps = 21/438 (4%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SFD + L+ I + Y +PTP+Q+ AIP +L GRDLM+ AQTG+GKTA F +P+L Sbjct: 268 SFDDIKLTEIIRTNIKMARYDKPTPVQKYAIPIILSGRDLMSCAQTGSGKTAAFLVPILN 327 Query: 62 HLITR---------QPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGG 112 ++ + +P+ + ++ L+L PTRELA QI E + +S +R V++GG Sbjct: 328 RMLEQGASMNPASNRPYQRRKQYPLGLVLAPTRELATQIYEEAKKFSYRSRMRPAVLYGG 387 Query: 113 VSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRR 172 + + QM +L G ++VATPGRL D+ ++ + L+ + LVLDEADRMLDMGF IR Sbjct: 388 NNTSEQMRELDRGCHLIVATPGRLDDIINRGKIGLENLRFLVLDEADRMLDMGFEPQIRH 447 Query: 173 VLTK--LPA--KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVD 228 ++ +P +RQ L+FSATF +I+ LA L N + + V R + S+ +TQ + +V+ Sbjct: 448 IIENRDMPPTGQRQTLMFSATFPKNIQELASDFLSNYIFLAVGRVGSTSENITQTILWVN 507 Query: 229 KKRKRELLSHMIGK--------GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKS 280 + KR L ++ + L+F TK GA+ L E L ++ +IHG++S Sbjct: 508 ENEKRSYLLDLLSRLREGSPDYSPDSLTLIFVETKKGADALEEFLYQNKHPVTSIHGDRS 567 Query: 281 QGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAA 340 Q R AL F+SGD +LVAT +AARGLDI + HV+NY+LP+ E+YVHRIGRTGR Sbjct: 568 QREREDALKCFRSGDCPILVATAVAARGLDIPHVKHVINYDLPSDVEEYVHRIGRTGRMG 627 Query: 341 ATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRG 400 G A S ++ D+ +LL + + E P ++ + GG G Sbjct: 628 NLGIATSFFNEKNRNIVSDLVELLIETNQELPSFLEEMANDRYGGPRRSNNSRGGGNRYG 687 Query: 401 QGGGRGQQQPRRGEGGAK 418 G G + R+ + + Sbjct: 688 GGTAFGSRDYRQPQSNQR 705 >UniRef50_Q2NEZ7 Predicted helicase n=20 Tax=cellular organisms RepID=Q2NEZ7_METST Length = 583 Score = 576 bits (1486), Expect = e-163, Method: Composition-based stats. Identities = 157/395 (39%), Positives = 234/395 (59%), Gaps = 7/395 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F L +SP+I +AVA+ G+ E +PIQ AIP +L +D+ AQTGTGKTA F +PLL Sbjct: 4 LKFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLL 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 +++ + ++A+IL PTRELA Q+ E +R S YL I L V+GG I+ Q+ Sbjct: 64 ENIDSE------DNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQI 117 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ GV +++ TPGR++D + + L+ ++ ++LDEAD MLDMGF DI +L +P Sbjct: 118 KALQKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFREDIEYILEDIPY 177 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ LLFSAT +I LA++ NP ++V + + V Q V + K ELLS + Sbjct: 178 ERQFLLFSATLPQEILQLAQRYQTNPEIVKVTKHELTTPDVEQKYFEVKEDMKLELLSRL 237 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++ LVF TK + L L G + +HG+ +Q R R ++ FK G+I +L Sbjct: 238 LDLHDFDLSLVFCNTKRKVDKLVSHLQIRGYLADGLHGDLTQNQRDRVMSKFKKGNIEIL 297 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+ + V N+++PN E YVHRIGRTGRA TG+A S V E LRD Sbjct: 298 VATDVAARGIDVGGVEAVFNFDIPNDNEYYVHRIGRTGRAGKTGKAYSFVSGREIYQLRD 357 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQR 394 I++ K +I + IP +K + +++ Sbjct: 358 IQRYAKTKIEQAPIPALSDVEEVKKDNFIEELKEK 392 >UniRef50_B6K0K2 ATP-dependent RNA helicase Prp11 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K0K2_SCHJY Length = 1056 Score = 576 bits (1486), Expect = e-163, Method: Composition-based stats. Identities = 159/429 (37%), Positives = 242/429 (56%), Gaps = 9/429 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 S+ GLS L + G+ EP+ IQ QAIPA+ GRD++ A+TG+GKT F LP+ + Sbjct: 460 SWSQCGLSVQTLSVIRSLGFEEPSAIQAQAIPAITAGRDVIGVAKTGSGKTIAFLLPMFR 519 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ ++P G PV A+I+TPTRELA QI + ++K L++R+ +GG I Q+ + Sbjct: 520 HIMDQRPLRNGEGPV-AVIMTPTRELAVQIFRECKPFAKALDLRATCAYGGAPIKDQIAE 578 Query: 122 LRGGVDVLVATPGRLLDLEHQ---NAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ G +++V TPGR++D+ + L + +VLDEADRM D+GF + R+L + Sbjct: 579 LKRGAEIVVCTPGRMIDVLNANSGRVTNLHRCTYVVLDEADRMFDLGFEPQVMRILNNIR 638 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ +LFSATF ++ALA K+L P+EI V R+ + +V Q V ++ K L Sbjct: 639 PDRQVVLFSATFPRAMEALARKVLKKPIEITVGGRSVVAAEVEQLVEVRSEESKFPRLLE 698 Query: 239 MIGK----GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSG 294 ++G+ + LVF A+ L QL K G +IHG K Q R ++D+K G Sbjct: 699 LLGELYNTQPDVRTLVFVDRHESADALLSQLMKRGYSCNSIHGGKDQHDRDSTISDYKMG 758 Query: 295 DIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEH 354 VL+AT +AARGLD++ L VVNY+ PN EDYVHR+GRTGRA TG A++ V D+ Sbjct: 759 IFDVLIATSVAARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFVTPDQS 818 Query: 355 KLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE 414 + I K LK + + + + + +++G+++ G G G G + R E Sbjct: 819 RYAVGIAKALKMSKQPVPLE-LQNLANEFLKNVKSGKEKAAGSGFGGKGLSRLDETRNAE 877 Query: 415 GGAKSASAK 423 + + Sbjct: 878 RKMQRRAFG 886 >UniRef50_Q86XP3 ATP-dependent RNA helicase DDX42 n=64 Tax=Eukaryota RepID=DDX42_HUMAN Length = 938 Score = 576 bits (1485), Expect = e-163, Method: Composition-based stats. Identities = 153/443 (34%), Positives = 232/443 (52%), Gaps = 9/443 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF G ++ + + Y +PTPIQ Q +P L GRD++ A+TG+GKTA F P+L Sbjct: 254 SFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLI 313 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ ++ G P+ A+I+ PTREL QI + + K N+RS+ V+GG S+ Q Sbjct: 314 HIMDQKELEPGDGPI-AVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKA 372 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G +++V TPGRL+D + A L +V LV DEADRM DMGF + +R + + + R Sbjct: 373 LQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDR 432 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK-RKRELLS-HM 239 Q LLFSATF I+ LA +L +P+ + A++ VTQ V + K L+ + Sbjct: 433 QTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRL 492 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + VL+F K A LA L ++G +HG+ Q R + ++DFK DI VL Sbjct: 493 VEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVL 552 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLDI + V+NY++ + + HRIGRTGRA G A +L+ + D Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612 Query: 360 IEKLLKKEIPRIAIPGYE---PDPSIKAEPIQNGRQQR---GGGGRGQGGGRGQQQPRRG 413 + + L+ ++ + + + + G+ ++ GGGG G G Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRERPGLGSENMD 672 Query: 414 EGGAKSASAKPAEKPSRRLGDAK 436 G S A KPS + Sbjct: 673 RGNNNVMSNYEAYKPSTGAMGDR 695 >UniRef50_B7EQA6 cDNA clone:J023079L21, full insert sequence n=5 Tax=Magnoliophyta RepID=B7EQA6_ORYSJ Length = 759 Score = 575 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 152/413 (36%), Positives = 228/413 (55%), Gaps = 8/413 (1%) Query: 16 VAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRP 75 V + G+ PTPIQ Q+ P L RD++A A+TG+GKT G+ +P ++ ++ R Sbjct: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGF--ILLKRLQHNSRDG 303 Query: 76 VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGR 135 L+L+PTRELA QI + + + + I S+ ++GG PQ+ L G D++VATPGR Sbjct: 304 PTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGR 363 Query: 136 LLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIK 195 L D+ V L QV LVLDEADRMLDMGF IR+++ ++ KRQ L+F+AT+ +++ Sbjct: 364 LNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVR 423 Query: 196 ALAEKLLHNPLEIEVARRN--TASDQVTQHVHFVDKKRKRELLSHMIGKGNWQ-QVLVFT 252 +A LL NP+++ + + A+ +TQ+V + K L ++ ++++F Sbjct: 424 KIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFC 483 Query: 253 RTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIE 312 TK + LA L + ++AIHG+KSQ R L++F+SG +LVATD+AARGLDI+ Sbjct: 484 STKRMCDQLARNLARQ-YGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIK 542 Query: 313 ELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIA 372 ++ VVNY+ P EDYVHRIGRTGRA ATG A + C + K D+ K+L+ ++ Sbjct: 543 DIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLVKILEGANQSVS 602 Query: 373 IPGYEPDPSIKAEPIQN--GRQQRGGGGRGQGGGRGQQQPRRGEGGAKSASAK 423 + GGRG G + G S S Sbjct: 603 QQLRDMVSRGGYGGRSRRWASSDDSYGGRGYDSGYTSRSTDNYNSGYGSQSGN 655 >UniRef50_B5EAF1 DEAD/DEAH box helicase domain protein n=3 Tax=Deltaproteobacteria RepID=B5EAF1_GEOBB Length = 471 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 190/477 (39%), Positives = 269/477 (56%), Gaps = 36/477 (7%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L P + + GY PTPIQ QAIP+V+ G+D++ AQTGTGKTA F LP+L Sbjct: 1 MDFKQFNLHPKVQAGIEAMGYVTPTPIQLQAIPSVISGQDVLGLAQTGTGKTAAFGLPML 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L+ + R VR L+L PTRELA QI + + K +RS+ V+GGV+IN Q+ Sbjct: 61 HRLVQEE-----RGHVRGLVLAPTRELAEQINDALNGMGKQTRLRSVTVYGGVNINTQIK 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL+ G +++VA PGRLLD Q + L +VEILVLDEAD+M DMGF+ D+R++L LP K Sbjct: 116 KLKEGAEIVVACPGRLLDHISQGTIDLSRVEILVLDEADQMFDMGFLPDVRKILRALPGK 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNL+FSAT DDI+ LA ++L NP+ ++V R + V+ ++ V + K LL M+ Sbjct: 176 RQNLMFSATMPDDIRRLAHEILRNPVTVQV-SRTAPAATVSHALYPVGQHLKTPLLFEML 234 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + VL+FT+TKH A + EQL K G ++ ++ GN SQ R AL F+ G +++V Sbjct: 235 KHTDTESVLIFTKTKHRAKRVGEQLEKAGYKATSLQGNLSQNRRQAALDGFRDGTFQIMV 294 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ + HV+NY++P+ PE Y HRIGRTGRAA TG+A ++V ++ +R I Sbjct: 295 ATDIAARGIDVSLISHVINYDIPDTPEAYTHRIGRTGRAAKTGDAFTMVTSEDDYTVRSI 354 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQR-------------------------- 394 EK+L +I R I G++ + + R R Sbjct: 355 EKVLGTKIERRRIEGFDYAVPAPQKDTEFARPPREPQRRRDGAKPGAGRPAAAGPAGAKP 414 Query: 395 ----GGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRP 447 G G GR + ++ PA K + G +PA RR Sbjct: 415 ASAVGAKGNAAASGRPAAHGSKDGSADGGHASGPAGKHRQHPGGNRPANHAARRSGR 471 >UniRef50_Q9VXW2 CG6227 n=20 Tax=Endopterygota RepID=Q9VXW2_DROME Length = 1224 Score = 574 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 151/438 (34%), Positives = 236/438 (53%), Gaps = 5/438 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 ++ G+S + + G+ +PTPIQ QAIPA++ GRDL+ A+TG+GKT F LP+ + Sbjct: 511 TWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFR 570 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ + G + A+I+ PTREL QIG+++R +SK L +R + V+GG I+ Q+ + Sbjct: 571 HILDQPSMEDGDGAI-AIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAE 629 Query: 122 LRGGVDVLVATPGRLLDLEHQ---NAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ G +++V TPGR++D+ L +V +VLDEADRM DMGF + R++ + Sbjct: 630 LKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVR 689 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ ++FSATF ++ALA ++L P+E+ V R+ +V QHV ++ K L Sbjct: 690 PDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLE 749 Query: 239 MIGKGNW-QQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++G ++VF + A+ L L K ++HG Q R + DFKSG +R Sbjct: 750 LLGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVR 809 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +L+AT +AARGLD+++L VVNY++PN EDYVHR GRTGRA G A + + ++ + Sbjct: 810 LLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYA 869 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 DI + + I KA G+ GGG G + +Q + Sbjct: 870 GDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGGGFSGKGFKFDEQEFNAAKES 929 Query: 418 KSASAKPAEKPSRRLGDA 435 K + Sbjct: 930 KKLQKAALGLADSDDEED 947 >UniRef50_B3QTY3 DEAD/DEAH box helicase domain protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QTY3_CHLT3 Length = 431 Score = 574 bits (1481), Expect = e-162, Method: Composition-based stats. Identities = 207/430 (48%), Positives = 280/430 (65%), Gaps = 3/430 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+S+ L+P ILRA+ E GY PT IQ AIP + G+D++A+AQTGTGKTA F LP+L Sbjct: 4 INFESISLNPSILRALKELGYETPTAIQAAAIPEAILGKDILATAQTGTGKTAAFALPIL 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + + R RALILTPTRELA QI N+R Y++YL +R+ V+ GGV +PQ+ Sbjct: 64 HRLGENRSYD--IRAPRALILTPTRELALQIDNNIRLYARYLRLRTGVIMGGVPAHPQIK 121 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR D+LVATPGRL+DL Q + LDQ++ VLDEADRMLDMGFI DIRR+ + P Sbjct: 122 MLRRNPDILVATPGRLIDLFDQGFIGLDQIQTFVLDEADRMLDMGFIDDIRRIESLQPRD 181 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT S +I+ALA ++L P+ IEVA ++ +D +TQ V FV++ KRELL ++ Sbjct: 182 HQTLLFSATLSPEIEALASRMLREPVRIEVAPVSSVADNITQKVLFVEQNNKRELLHNLF 241 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + ++ LVFTRTK ANH+AEQL + GI + AIH +KSQ AR RAL F G I VLV Sbjct: 242 KENDIKRALVFTRTKQRANHVAEQLIRLGISADAIHSSKSQRARQRALMLFDRGKINVLV 301 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D++ + HV+NYELP+ PE+YVHRIGRT RA A+G ALS DE ++L+ I Sbjct: 302 ATDIAARGIDVDGISHVINYELPDDPENYVHRIGRTARAGASGTALSFCDADEVRMLKGI 361 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPI-QNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKS 419 EKL K I + + + G + + + + + + K Sbjct: 362 EKLTKSSIAICDNNPFHSIAVASMHKVAKAGNKPQYFQKKPRRFSNSKSKYSSKYSDRKH 421 Query: 420 ASAKPAEKPS 429 +S K + K + Sbjct: 422 SSGKRSYKSA 431 >UniRef50_A9M0D7 ATP-dependent RNA helicase, putative n=21 Tax=Neisseria RepID=A9M0D7_NEIM0 Length = 457 Score = 574 bits (1481), Expect = e-162, Method: Composition-based stats. Identities = 200/429 (46%), Positives = 268/429 (62%), Gaps = 4/429 (0%) Query: 1 MS--FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLP 58 MS F SLGL +++ A+ QGY PTPIQ AIP L G DL+A+AQTGTGKTA F LP Sbjct: 1 MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLP 60 Query: 59 LLQHLI--TRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSIN 116 L+ L + PVR L+LTPTRELA QI +NV+ Y K L +R V+FGG++++ Sbjct: 61 SLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLPLRHTVLFGGMNMD 120 Query: 117 PQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTK 176 Q LR G +++VAT GRLLD Q + L++VEI+VLDEADRMLDMGFI DIR+++ Sbjct: 121 KQTADLRAGCEIVVATVGRLLDHVKQKNIHLNKVEIVVLDEADRMLDMGFIDDIRKIMQM 180 Query: 177 LPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELL 236 LP +RQ LLFSATFS I+ LA+ ++ P +EVA +NT + V QH+ VD +KR LL Sbjct: 181 LPRQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQNTTNANVEQHIIAVDTIQKRNLL 240 Query: 237 SHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 +I + QV+VF +TK + + +L + + + AIHG++SQ +R L FK G++ Sbjct: 241 ERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSAQAIHGDRSQQSRLETLNAFKDGNL 300 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 RVLVATDIAARGLDI ELP V+NYE+P PEDYVHRIGRTGRA A G A+SL+ E K+ Sbjct: 301 RVLVATDIAARGLDIAELPFVINYEMPAQPEDYVHRIGRTGRAGADGVAISLMDESEQKM 360 Query: 357 LRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 I++L ++ I G+EP + + R R + Q+ + Sbjct: 361 FESIKELTGNKLLIERIEGFEPQWWEQGGAKPEKPEMREPRQRNRYESAKAQREKNTRPE 420 Query: 417 AKSASAKPA 425 + A A Sbjct: 421 NAANDAGAA 429 >UniRef50_Q2BP56 Putative ATP-dependent RNA helicase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BP56_9GAMM Length = 427 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 200/416 (48%), Positives = 273/416 (65%), Gaps = 2/416 (0%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF L L P++ + GY +PTPIQ QAIP VL G DL+A AQTGTGKTA F LP+++ Sbjct: 5 SFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIE 64 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L G RPVRAL+L PTRELA Q+ +N +Y + L +R + V+GGV + Q+ + Sbjct: 65 KLSKNPI--DGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKR 122 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G D+LVATPGRLLDL Q A+ L+++E LVLDEADRMLD+GFI I++++ R Sbjct: 123 LKRGTDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDYAADDR 182 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLF+AT + ++ LAE L+NP +I+V RN+ + Q+ Q + VD +K ++LS++I Sbjct: 183 QTLLFTATADESVEVLAEFYLNNPTKIKVTPRNSTAKQIRQFAYQVDYGQKADILSYLIT 242 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 +G W Q LVF RTK + L + L K+GI +AAIHG KSQ R R L +F +GD+ VLVA Sbjct: 243 EGKWGQTLVFVRTKKRVDELTQYLCKEGINAAAIHGEKSQRERVRMLNEFIAGDLHVLVA 302 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLDIE LP+VVNY+LPN PE YVHRIGRTGRA TGEA+SLV E + L+ IE Sbjct: 303 TDVAARGLDIESLPYVVNYDLPNQPEAYVHRIGRTGRAGETGEAVSLVAPAEREFLQRIE 362 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 KL+K++I +P E ++ + + +R Q + + + + Sbjct: 363 KLIKQKIKLRPVPRIEDGKRLEIDDFADKPMKRKPAKAKQQKRKKVESYQPDKSKK 418 >UniRef50_C8WL27 DEAD/DEAH box helicase domain protein n=3 Tax=Eggerthella lenta DSM 2243 RepID=C8WL27_EGGLE Length = 508 Score = 573 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 188/455 (41%), Positives = 265/455 (58%), Gaps = 8/455 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS L AV GY PTP+Q QAIP VLEGRDL+A+A TGTGKTA F LP+L Sbjct: 3 NFADLGLSEAALAAVERLGYENPTPVQLQAIPLVLEGRDLIAAASTGTGKTAAFLLPILS 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L +G+R R L+++PTRELA QI + ++ VFGG PQ+ + Sbjct: 63 TL---PRGKRGKRAPRVLVVSPTRELAQQISQTCMQITRKTGHYVTTVFGGTPYGPQINE 119 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 +R G DVL+ATPGRL DL ++ V L ++ LVLDEADRMLDMGF+ + ++ PA R Sbjct: 120 IRRGTDVLIATPGRLNDLMNKGVVDLGGIKSLVLDEADRMLDMGFLPAVTTIVDATPADR 179 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT I+ LL++P +E+AR + V Q + + +K ELL ++ Sbjct: 180 QTLLFSATIDHSIQKNLGSLLNDPAVVEIARNGETAQTVEQFMMPIANFKKPELLQALLE 239 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +V+VF RTK+ AE L G R+ +IH +KSQG R RAL +F+ G +LVA Sbjct: 240 EKGSDRVIVFARTKNRTEDCAEALCDAGYRAESIHSDKSQGQRKRALDNFRRGRTSILVA 299 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+ ARG+D+ ++ HV+N++LP++PEDYVHRIGRTGRA G A+S V + + + DIE Sbjct: 300 TDVLARGIDVPDVDHVINFDLPDMPEDYVHRIGRTGRAGEQGFAVSFVTRESRRTMSDIE 359 Query: 362 KLLKKEIPRIAIPGYEPDPSI-----KAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 KL+ K +P + + YE D ++ K P + G + G GR G R ++ Sbjct: 360 KLIGKNVPLMELETYELDMTVLEKGKKGAPKKGGYKGNKGSGRPAGAKRSDKRGGEKRDF 419 Query: 417 AKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPA 451 + + ++ + R G K A ++ KP Sbjct: 420 ERRSDSRAEGRSDNRPGRGKRAEGKRSFDGAAKPD 454 >UniRef50_C6XMJ7 DEAD/DEAH box helicase domain protein n=23 Tax=Bacteria RepID=C6XMJ7_HIRBI Length = 769 Score = 573 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 208/472 (44%), Positives = 276/472 (58%), Gaps = 19/472 (4%) Query: 1 MS-FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPL 59 M+ F L+ +L+A+ ++GY PTPIQ QAIP V+EG D++ AQTGTGKTA F LPL Sbjct: 1 MTKFSDFDLASPVLKALDKEGYETPTPIQAQAIPLVMEGGDILGIAQTGTGKTAAFALPL 60 Query: 60 LQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 L HL G VR L++ PTRELA+QI E Y + L++R L VFGGV I QM Sbjct: 61 LHHLCKLPDM-PGPGAVRCLVIAPTRELASQIAEAFSKYGQCLSLRVLKVFGGVPIRKQM 119 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L G DVLVATPGRL+DL Q AV L VE LVLDEAD+MLD+GFIH +RR+ +P Sbjct: 120 RDLHRGADVLVATPGRLIDLMEQGAVDLSYVEKLVLDEADQMLDLGFIHPLRRIAAAVPK 179 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ L FSAT ++ LA + L NP ++ +A+ +T +++VTQ + V++ +K LL Sbjct: 180 ERQTLFFSATMPSNVSGLANQFLTNPKKVSIAQESTTAERVTQTMSHVNQAQKGPLLLVN 239 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + + LVFTRTKHGA+ + +L GIR AIHGNKSQ R RAL F++GD +VL Sbjct: 240 LQDESIDRALVFTRTKHGADKVVSKLMNAGIRCGAIHGNKSQAQRERALNAFRNGDSKVL 299 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARG+D+ + HV NYE+PNVPE YVHRIGRT RA G+A+S V DE K L D Sbjct: 300 VATDIAARGIDVPGVSHVFNYEIPNVPEQYVHRIGRTARAGREGKAISFVSRDEKKYLLD 359 Query: 360 IEKLLKKEIPRIAIPG-----------------YEPDPSIKAEPIQNGRQQRGGGGRGQG 402 I++ ++ +IP + +P E G + G GGR G Sbjct: 360 IQRQIRMKIPIVDLPEGFIDQAEEITANATPVIEERPRGRGGRDGARGGRDGGRGGRDGG 419 Query: 403 GGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 G +GG + + G + R +R +P A+ Sbjct: 420 RGGRDGGRGGRDGGRGRSEGRGGRDGGGYKGRDDRPQREDRPQREERPFRAE 471 >UniRef50_Q9M2F9 DEAD-box ATP-dependent RNA helicase 52 n=13 Tax=Eukaryota RepID=RH52_ARATH Length = 646 Score = 573 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 159/386 (41%), Positives = 226/386 (58%), Gaps = 15/386 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F + L + + Y +PTP+Q+ AIP + GRDLMA AQTG+GKTA F P++ Sbjct: 147 TFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIIS 206 Query: 62 HLITRQPHAKGRR----PVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINP 117 ++ Q + R A+IL+PTRELA QI + R +S ++ +V +GG +N Sbjct: 207 GIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQ 266 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 Q+ +L GVD+LVATPGRL DL + V L V L LDEADRMLDMGF IR+++ ++ Sbjct: 267 QIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQM 326 Query: 178 ----PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKR 233 P RQ +LFSATF +I+ LA L N + + V R +++D + Q V FV KR Sbjct: 327 DMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDSDKR 386 Query: 234 ELLSHMI--GKGNWQQ-----VLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTR 286 L ++ + N Q LVF TK GA+ L L +G + IHG++SQ R Sbjct: 387 SHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREV 446 Query: 287 ALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEAL 346 AL FK+G +LVATD+AARGLDI + HVVN++LPN +DYVHRIGRTGRA +G A Sbjct: 447 ALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLAT 506 Query: 347 SLVCVDEHKLLRDIEKLLKKEIPRIA 372 + + + + + +L+++ + Sbjct: 507 AFFNDNNTTMAKPLAELMQEANQEVP 532 >UniRef50_B3M5L4 GF23818 n=1 Tax=Drosophila ananassae RepID=B3M5L4_DROAN Length = 795 Score = 572 bits (1477), Expect = e-162, Method: Composition-based stats. Identities = 151/417 (36%), Positives = 221/417 (52%), Gaps = 5/417 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF G +L+AV + Y +PTPIQ QA+P L GRD++ A+TG+GKTA F PLL Sbjct: 266 SFGHFGFDEPLLKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPLLM 325 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 HL+ ++ G P+ LIL PTREL+ QI + + K N+ + +GG S Q Sbjct: 326 HLMDQKELQPGDGPI-GLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKA 384 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L G +++VATPGR++D+ A L +V LVLDEADRM MGF +R + + R Sbjct: 385 LEQGAEIVVATPGRMIDMVKMKATNLKRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDR 444 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVD-KKRKRE-LLSHM 239 Q LLFSATF I+ LA +L +P+ I N A+ +TQ V +K LL H+ Sbjct: 445 QTLLFSATFKKRIERLARDVLTDPVRIVQGDLNEANQDITQSVFVFPNPLQKWNWLLCHL 504 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + VL+F K A +A L +HG+ Q R + + FK + +L Sbjct: 505 VKFLSEGSVLIFVTKKADAETVANNLLVKEYNCLLLHGDMDQADRNKVITQFKKKECDIL 564 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLDI + +VVNY++ + + HRIGRTGRA G A +LV + + Sbjct: 565 VATDVAARGLDIPHIRNVVNYDIARDIDTHTHRIGRTGRAGEKGNAFTLVTDKDKEFAGH 624 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 + + L+ +P + ++K+ ++ R ++G G + G RG G Sbjct: 625 LVRNLEGA--DQQVPEDLMELAMKSSWFRSSRFKQGKGRKPANTYTGLGYRERGNGP 679 >UniRef50_Q46G62 ATP-dependent RNA helicase n=7 Tax=cellular organisms RepID=Q46G62_METBF Length = 579 Score = 572 bits (1476), Expect = e-162, Method: Composition-based stats. Identities = 147/392 (37%), Positives = 224/392 (57%), Gaps = 7/392 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGR-DLMASAQTGTGKTAGFTLPLLQ 61 F +LGLS +L+A+ ++G+ EPTPIQ++ IP L+G D++ AQTGTGKT F P+++ Sbjct: 7 FKALGLSDSMLKALKKKGFEEPTPIQEKVIPLFLKGECDIIGQAQTGTGKTTAFGAPIIE 66 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + + V+A++LTPTRELA Q+ E + + + ++GG S+ Q Sbjct: 67 KI------PEKSGKVQAIVLTPTRELAIQVSEELNSLKGDKKLHIVPIYGGQSMTQQFRM 120 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GVD++V TPGR++D + ++ L+ + VLDEAD ML+MGFI DI+ +L + Sbjct: 121 LKSGVDIVVGTPGRVIDHLERKSLNLENIAYFVLDEADEMLNMGFIDDIKEILKATGPDK 180 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 + L FSAT I + +K + N + + + + + Q V + K E L +I Sbjct: 181 RMLFFSATMPKPILGIIKKHMKNYEYVAIKKEDLDVNLTEQIYFEVKESDKFEALCRIID 240 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + LVF RTK + LA++L G + A+HG+ SQ R + L F+ I +LVA Sbjct: 241 IEDEFYGLVFCRTKTDTSQLAQKLGDRGYAADALHGDLSQREREKILNRFRKQKINILVA 300 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARG+DI +L HV+NY LP PE YVHRIGRTGRA G A++ V E++ L I+ Sbjct: 301 TDVAARGIDIMDLTHVINYSLPQDPESYVHRIGRTGRAGKQGTAITFVTSTEYRRLTYIK 360 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQ 393 K K + R IP + K ++ ++ Sbjct: 361 KTSKSAMKRGRIPEIKDVIKAKRARVKAELEE 392 >UniRef50_C0Q9A4 DeaD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9A4_DESAH Length = 616 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 157/386 (40%), Positives = 227/386 (58%), Gaps = 7/386 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +GL +L+A+ + GY PT IQ + IP +L GRDL+ AQTGTGKTA F LPLL Sbjct: 21 FSEMGLIKPVLKALDDLGYETPTTIQAETIPYILAGRDLLGQAQTGTGKTAAFALPLLSR 80 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYS-KYLNIRSLVVFGGVSINPQMMK 121 + + + + L+L PTRELA Q+ E+ + Y+ + L V+GG + Q+ + Sbjct: 81 IDIK------LKKPQVLVLAPTRELAIQVAESFKGYAARIKGFNVLPVYGGQAYAGQLNQ 134 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV V+V TPGRL+DL + + L Q+ LV+DEAD ML MGFI D+ +L + P R Sbjct: 135 LKRGVHVIVGTPGRLMDLMKRGVLDLTQIMTLVIDEADEMLRMGFIDDVEWILEQTPPGR 194 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT IK +A K L +P ++ + R +D + Q V K + L+ ++ Sbjct: 195 QVALFSATMPAPIKKIAIKYLTDPKDVFIRLRTATADTIRQRFWMVKGTHKLDALTRILE 254 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + ++VF RTK LAE+L G + A++G+ +Q AR R + FK G I +LVA Sbjct: 255 AETFDAIIVFVRTKTATVELAEKLEARGYAAVALNGDIAQKARERTIDRFKKGKIDILVA 314 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + HV+NY++PN E YVHRIGRTGRA G+A+ V E +L+ IE Sbjct: 315 TDVAARGLDVERVSHVINYDIPNGAESYVHRIGRTGRAGRAGDAILFVSPRERWMLKVIE 374 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPI 387 K +++I + +P E + Sbjct: 375 KTTRQQIEMMKLPSTEAINDKRIADF 400 >UniRef50_Q7UG20 ATP-dependent RNA helicase n=2 Tax=Bacteria RepID=Q7UG20_RHOBA Length = 931 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 160/469 (34%), Positives = 240/469 (51%), Gaps = 27/469 (5%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L L ++ +AVA GY +PTPIQ + IP +L+GRD++A +QTGTGKTA F LP+L Sbjct: 306 FRDLDLRAEVQKAVAASGYDKPTPIQAEIIPYMLDGRDVLAQSQTGTGKTAAFALPILSR 365 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMK 121 + R R + L+L PTRELA Q+ + Y L + ++GG PQ+ + Sbjct: 366 VDVR------SRRPQVLVLAPTRELAIQVARSFTKYGADLSGFQVAAIYGGQDYEPQLKQ 419 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GV V+V TPGR++D + + L ++ LVLDEAD ML+MGF+ D++ VL K P R Sbjct: 420 LRRGVQVVVGTPGRVIDHVKRGTLDLGSLDCLVLDEADEMLNMGFLEDVQFVLEKSPEGR 479 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT I+ +A++ L++P I + + + V Q FV + K + L+ ++ Sbjct: 480 QVALFSATLPKPIRKIADEYLNDPARITIKSKTITAASVRQRALFVSPRDKIDALTRILE 539 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 V+VFT+TK +AE+L++ G + A++G+ Q R R + K G + VLVA Sbjct: 540 VEETDGVIVFTKTKDSTLSVAEKLSQQGFSAIALNGDMPQKVRERTIDQLKRGQLDVLVA 599 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+ + HV N++LP+ E YVHRIGRTGRA +G+A+ + + + LR IE Sbjct: 600 TDVAARGLDVPRISHVFNFDLPHDSESYVHRIGRTGRAGRSGQAIIFLTNAQRRQLRFIE 659 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNG--------------------RQQRGGGGRGQ 401 K+ I I IP + + ++ G Sbjct: 660 NTTKQPIEIIDIPTVADINEARVRRFKQRITDVSADQDLTVYKDMIAQYAEESGKPMEMI 719 Query: 402 GGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKP 450 + K K E+ R + + + R R Sbjct: 720 AAALAEMSQNGRPFLLKERPKKQRERSDRDNSRGRDSFDSNDRSGNRGS 768 >UniRef50_Q65XX1 Vasa-and belle-like helicase protein 1, isoform c n=3 Tax=Caenorhabditis elegans RepID=Q65XX1_CAEEL Length = 660 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 169/457 (36%), Positives = 242/457 (52%), Gaps = 16/457 (3%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F+ G P ++ V GY +PTP+Q+ +IP +L RDLM+ AQTG+GKTA F LP++QH Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 200 Query: 63 LITR-------QPHAKGRRP--VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGG- 112 ++ GRR AL+L+PTRELA QI + +S NI++ +++GG Sbjct: 201 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 260 Query: 113 VSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRR 172 + Q+ +LR G +L+ATPGRL+D+ Q + L LVLDEADRMLDMGF IR+ Sbjct: 261 ENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRK 320 Query: 173 VLTK-LPAK--RQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVD 228 ++ + +P K R +FSATF +I+ LA+ L N + + V R + S+ + Q + +V+ Sbjct: 321 IVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVN 380 Query: 229 KKRKRELLSHMI-GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRA 287 + KR L ++ + + VLVF TK GAN LA LN+ IRS +IHG+ Q R R Sbjct: 381 EMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERN 440 Query: 288 LADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALS 347 L F+SG +LVAT +AARGLDI + HV+NY+LP ++YVHRIGRTGR G A S Sbjct: 441 LELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATS 500 Query: 348 LVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQ 407 + RD++ L+ + + + R G GRG Sbjct: 501 FFNDKNRGIGRDLKNLIVESNQEVP-EWLHQVAAEGRIGGGQRGGNRRFGATDYRVGRGG 559 Query: 408 QQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRR 444 G ++ S G RR Sbjct: 560 GGSFGGNFSNYNSGGATGGFGSGPAYGGSFGGGAPRR 596 >UniRef50_B6R5V0 ATP-dependent rna helicase, dead/deah box family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R5V0_9RHOB Length = 453 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 192/455 (42%), Positives = 280/455 (61%), Gaps = 7/455 (1%) Query: 1 MS-FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPL 59 M+ FD LG++ A+ +GY EPTPIQ+ AIP +L+G+DL+ AQTGTGKTA F +PL Sbjct: 1 MTDFDKLGVAKPFQIALKSKGYSEPTPIQENAIPYILDGKDLLGLAQTGTGKTAAFAVPL 60 Query: 60 LQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 LQ L+ + + + VR+LILTPTRELA QI +N++ Y+ + + V GGV PQ Sbjct: 61 LQRLLESR-YRAAPKSVRSLILTPTRELADQITKNIKAYAGRTKMYTSCVVGGVPFPPQF 119 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ G+DVLVATPGRLLDL +N V D++EI VLDEAD+MLD+GFI ++ + LP Sbjct: 120 HALQRGLDVLVATPGRLLDLHRKNGVSFDELEIFVLDEADQMLDLGFIAELEEIAYLLPK 179 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 KRQ L FSAT +I+ L+E+ L NP+E+ A T + VTQ + ++K K LL + Sbjct: 180 KRQTLFFSATMPREIRDLSERFLTNPVEVSTAPPATTVETVTQQIAHLEKDAKFPLLKEL 239 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + K ++ LVFT TK G+ LA +LN DG+ + AIHG+ SQ R + L FK G ++ L Sbjct: 240 LEKDECERALVFTLTKKGSARLAARLNADGVPAEAIHGDMSQAERQKTLDKFKRGKLKTL 299 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+ ++ HV+N+++PN E+YVHRIGRT RA +G A++ ++ +LR Sbjct: 300 VATDVAARGIDVSDISHVINFDMPNATENYVHRIGRTARAGKSGTAITFCLPEDRGMLRA 359 Query: 360 IEKLLKKEIPRIA----IPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG 415 I+KL+ K+I + P S ++ G++ +G G R G Q +G+ Sbjct: 360 IQKLIGKKIAEMDGFTFFPSDREPKSARSNAQVAGKRAKGSGPRKGPGNGKFAQKPKGKP 419 Query: 416 GAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKP 450 K + + + S + PAG+ + +KP Sbjct: 420 TGKKSPPRRSPSKSSD-NASAPAGDTGGYLKRKKP 453 >UniRef50_B7P029 Vasa n=9 Tax=Coelomata RepID=B7P029_9BIVA Length = 801 Score = 571 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 155/424 (36%), Positives = 244/424 (57%), Gaps = 10/424 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF+ G+ + + + + +PTP+Q+ +IP V+ GRDLMA AQTG+GKTA F LP+L Sbjct: 353 SFEEAGIYDGFMTNLVKAHFEKPTPVQKYSIPIVMSGRDLMACAQTGSGKTAAFLLPVLT 412 Query: 62 HLITRQPHAKG---RRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 ++ + +AL++ PTRELA QI + R +S +R +V++GG S+ Q Sbjct: 413 GMMKNGLTGSAFSDVQEPQALVVAPTRELALQIFNDARKFSHGTMLRPVVLYGGTSVGYQ 472 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTK-- 176 + ++ G ++V TPGRL+D+ ++ + L +++ L+LDEADRMLDMGF DI++++ + Sbjct: 473 LKQVENGAHIVVGTPGRLIDVINKGKISLAKLKYLILDEADRMLDMGFGPDIKKIVHELG 532 Query: 177 LPA--KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRE 234 P +RQ L+FSATF ++I+ LA L++ L + V R A VTQH VD+++KR+ Sbjct: 533 TPEKTERQTLMFSATFPEEIQKLAGDFLNDYLFLTVGRVGGACSDVTQHFFQVDRQQKRQ 592 Query: 235 LLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSG 294 L ++ + + LVF K A+ LA L++ G + +IHG++ Q R AL DFK G Sbjct: 593 KLCDILSESGADKTLVFVEQKRNADFLASYLSESGFPTTSIHGDRLQREREEALRDFKQG 652 Query: 295 DIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVD-E 353 +L+AT +AARGLDI + HV+NY+LP ++YVHRIGRTGR G+A S D + Sbjct: 653 KAPILIATSVAARGLDIPNVKHVINYDLPQSIDEYVHRIGRTGRCGNLGKATSFFSEDGD 712 Query: 354 HKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRG 413 L + + ++L + IP + + + GGR + + + G Sbjct: 713 GSLAKPLMRILVDA--QQNIPDWLEASGQSSMSSGSYSGGGRFGGRDIRKDQERTREHAG 770 Query: 414 EGGA 417 G Sbjct: 771 NGQN 774 >UniRef50_P0A9P7 Cold-shock DEAD box protein A n=201 Tax=Bacteria RepID=DEAD_ECOL6 Length = 629 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 156/394 (39%), Positives = 232/394 (58%), Gaps = 7/394 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGL IL A+ + GY +P+PIQ + IP +L GRD++ AQTG+GKTA F+LPLLQ Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 +L + + L+L PTRELA Q+ E + D+SK++ + + ++GG + Q+ Sbjct: 67 NLD------PELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR 120 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR G ++V TPGRLLD + + L ++ LVLDEAD ML MGFI D+ ++ ++P Sbjct: 121 ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG 180 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LFSAT + I+ + + + P E+ + T ++Q V RK E L + Sbjct: 181 HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL 240 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++ ++F RTK+ +AE L ++G SAA++G+ +Q R + L K G + +L+ Sbjct: 241 EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI 300 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD+E + VVNY++P E YVHRIGRTGRA G AL V E +LLR+I Sbjct: 301 ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQR 394 E+ +K IP + +P E + E QQ+ Sbjct: 361 ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQ 394 >UniRef50_C4QME8 DEAD box ATP-dependent RNA helicase, putative n=7 Tax=Fungi/Metazoa group RepID=C4QME8_SCHMA Length = 1544 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 143/427 (33%), Positives = 227/427 (53%), Gaps = 5/427 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 ++ G+S +L + + +PTPIQ QA+P ++ GRD++ A+TG+GKT F +PL++ Sbjct: 851 NWVQAGISSRLLACLKRNNFDKPTPIQCQALPVIMSGRDMIGIAKTGSGKTLAFLVPLMR 910 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 HL + P G P+ AL+L PTRELA QI + + + + R++ V+GG I+ Q+ + Sbjct: 911 HLEHQAPLNPGDGPI-ALLLAPTRELALQIFKETKKLCQAADARAVCVYGGTGISEQIAE 969 Query: 122 LRGGVDVLVATPGRLLDLEHQ---NAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ G +++V TPGR++D+ L + +VLDEADRM D+GF + R++ Sbjct: 970 LKRGAEIIVCTPGRMIDMLAANGGRVTNLHRCSYVVLDEADRMFDLGFEPQVMRIIENCR 1029 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ L+FSATF ++ LA K+L P+EI++ R+ V QH + ++ K + Sbjct: 1030 PDRQTLMFSATFPRQMEILARKVLTLPIEIQIGGRSVVCSDVEQHAFILSEEEKVYKVLE 1089 Query: 239 MIGKG-NWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++G VLVF + A+ L L K G ++HG Q R + DFK G+IR Sbjct: 1090 LLGIYQEEGSVLVFVEKQESADELMRVLLKYGYPCLSLHGGIDQYDRDSVIMDFKRGNIR 1149 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +L+AT +AARGLD+ +L V+NY+ PN EDYVHR GRTGRA G A + + D+ + Sbjct: 1150 LLIATSVAARGLDVTDLLLVINYDCPNHYEDYVHRCGRTGRAGRKGFAYTFLTPDQERSA 1209 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 D+ + K+ + + K G++ G G G + + Sbjct: 1210 GDVVRAFKQSGQKPPEELMNMWNAYKIRMEHEGKKVYGSSGFRGKGFMFDEVEAQLNSEK 1269 Query: 418 KSASAKP 424 + Sbjct: 1270 RRLQKAA 1276 >UniRef50_C6ATS7 DEAD/DEAH box helicase domain protein n=15 Tax=Alphaproteobacteria RepID=C6ATS7_RHILS Length = 580 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 199/449 (44%), Positives = 271/449 (60%), Gaps = 2/449 (0%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+SLG+S I+ + + G PTPIQ+ +IP +LEGRDL+ AQTGTGKTA F LPL++ Sbjct: 24 NFESLGVSKPIIATLFQLGIETPTPIQEHSIPLLLEGRDLIGLAQTGTGKTAAFGLPLIE 83 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L+ + R R LIL PTREL QI E+++ + + ++R VV GGVSIN Q ++ Sbjct: 84 KLLADE-RRPDNRTTRTLILAPTRELVNQIAESLKKFIRKSSLRINVVVGGVSINKQQLQ 142 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L G D+LVATPGRLLDL ++ A+ L V LVLDEAD+MLD+GF+HD+R++ +P KR Sbjct: 143 LEKGTDILVATPGRLLDLINRRAITLTAVRYLVLDEADQMLDLGFVHDLRKIAKMVPKKR 202 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVD-KKRKRELLSHMI 240 Q +LFSAT I LA + L +P+++EV A+D+V Q+VHFV K K ELL + Sbjct: 203 QTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAADKVEQYVHFVAGKNDKTELLRKSL 262 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + +VF RTKHGA L + L G A+IHGNKSQG R RAL F+ G I+ L+ Sbjct: 263 TENPDGRAMVFLRTKHGAEKLMKHLENIGYSVASIHGNKSQGQRERALKAFRDGSIKTLI 322 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+DI + HV NY+LP VP+ YVHRIGRT RA G A++ DE KLLRDI Sbjct: 323 ATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRIGRTARAGRDGIAIAFCAPDEAKLLRDI 382 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 E+L+ +I + NG + GG+G+ G + Sbjct: 383 ERLMGIDITVASGEAPANISGGPRRANGNGNNRNRNGGQGREGQGRGEGRGDQNRSEHRG 442 Query: 421 SAKPAEKPSRRLGDAKPAGEQQRRRRPRK 449 + + G AG ++RR RP + Sbjct: 443 NRQERRPRREGEGSEVRAGGEERRPRPER 471 >UniRef50_C6C1F3 DEAD/DEAH box helicase domain protein n=2 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1F3_DESAD Length = 493 Score = 570 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 198/462 (42%), Positives = 270/462 (58%), Gaps = 15/462 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF I+ + GY PTPIQ +AIP VL+GRD+M AQTGTGKTA F LP++ Sbjct: 1 MSFKQFSFDRRIMAGIHACGYETPTPIQTKAIPEVLKGRDVMGLAQTGTGKTAAFALPIM 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L+ ++ G+ P+R L+L PTRELA QI EN + IRS VFGGV PQ+ Sbjct: 61 QRLLEKK--FSGQGPIRVLVLAPTRELALQIHENFMELGVEAGIRSAAVFGGVGAMPQIQ 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 R V+VA PGRLLDL +Q +KLD+V+ LVLDEADRMLDMGF+ DIR++++KLP + Sbjct: 119 AARR-SSVIVACPGRLLDLMNQGVIKLDKVDTLVLDEADRMLDMGFLPDIRKIMSKLPQR 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSAT DDI+ LA+K+L+ P ++VA + V + V + K LL ++ Sbjct: 178 RQNLLFSATMPDDIRDLADKILYRPATVQVAN-TAPAKTVEHVFYPVSQHLKNNLLFKVL 236 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + ++ +LVFTRTKH A +LA +L G ++ + GN SQ R RAL F+ G +V+V Sbjct: 237 EQTDYDSLLVFTRTKHKAKNLARRLAARGHKATFLQGNMSQNQRQRALDGFRDGSFKVMV 296 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D + + HVVN ++P+ E Y HRIGRTGRA +G A S V D+ +L+R+I Sbjct: 297 ATDIAARGIDCDRITHVVNLDVPDTAETYTHRIGRTGRAGRSGSAFSFVTRDDLRLMREI 356 Query: 361 EKLLKKEIPRIAIPGYE-PDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRR-GEGGAK 418 EK + I + ++ P+ P + G ++ R G R + R+ E Sbjct: 357 EKAVGYSIEHRTLEDFDYDKPNTHPAPAKRGGGRKPAADRKPAGERRPGRGRKPAEARDG 416 Query: 419 SASAKPAEKPSR---------RLGDAKPAGEQQRRRRPRKPA 451 S KPA + R PA RR R + Sbjct: 417 DESRKPAGERKSGGRRKPGGGRKPSGGPAKSSDERRDSRPSS 458 >UniRef50_A7K2L3 ATP-dependent RNA helicase n=17 Tax=Vibrionaceae RepID=A7K2L3_VIBSE Length = 419 Score = 570 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 201/421 (47%), Positives = 288/421 (68%), Gaps = 4/421 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F LG+ ++ ++ PTP+Q+++IP VLEG++L+A+AQTGTGKTA F LP++ Sbjct: 3 VNFADLGIEQKLIETLSNLNIVTPTPVQEKSIPHVLEGKNLLAAAQTGTGKTAAFGLPII 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q + + K +AL+L PTRELA Q+ +N+ YS +R + V+GG SI Q Sbjct: 63 QTVQQK----KLNGTPQALVLVPTRELAQQVFDNLNQYSAQTELRIVCVYGGTSIGVQKR 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL G D+L+ATPGRLLD V + + +LVLDEADRMLDMGF D++R+ +LPA+ Sbjct: 119 KLEEGADILIATPGRLLDHLFNGNVNISKTSMLVLDEADRMLDMGFWPDLQRIFRRLPAE 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 +Q LLFSATF IK +A KL+ +P+E+EV+ NT ++ V Q V+ VDKKRKRELL+++I Sbjct: 179 KQILLFSATFEKRIKTIAYKLMESPVEVEVSPANTTAETVKQMVYPVDKKRKRELLAYLI 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 G NWQQVLVFT+TK G++ LA++L DGI++ +I+G+KSQGAR RAL +FK G +R L+ Sbjct: 239 GSRNWQQVLVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKQGKVRALI 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI+EL VVN+++P EDYVHRIGRTGRA +G A+SL+ DE LL I Sbjct: 299 ATDVAARGLDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDEEYLLHAI 358 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 E LL + +P+ + G+EP + EP +NG +R + + + + G ++++ Sbjct: 359 ENLLDQRLPQEWLAGFEPTLIEEVEPEKNGSGRRRSRSSEKRKLKAKLAIHKNRGKSRNS 418 Query: 421 S 421 Sbjct: 419 R 419 >UniRef50_Q3AZR1 DEAD/DEAH box helicase-like n=2 Tax=Synechococcus RepID=Q3AZR1_SYNS9 Length = 458 Score = 570 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 224/446 (50%), Positives = 308/446 (69%), Gaps = 11/446 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+ L L + +R++ E GY PTPIQ IP VL+G+D+MASAQTGTGKTA F LP++ Sbjct: 24 LTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPII 83 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L R V +L+LTPTRELAAQ+ + + Y+KYL +RS VFGGVSI PQ+ Sbjct: 84 ELLRAED--KPKRYQVHSLVLTPTRELAAQVEASAKAYTKYLALRSDAVFGGVSIRPQVK 141 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L+GGVD+LVATPGRLLDL +Q ++ D +++LVLDEADRMLDMGFI DI++V+ LP Sbjct: 142 RLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIKKVIEYLPKN 201 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQN++FSATFS IK LA LL++P+EI+ + +N A+ + VH D RK +LL H+I Sbjct: 202 RQNMMFSATFSTPIKKLALGLLNDPVEIKASVQNQAAPTIEHLVHPCDMARKVDLLCHLI 261 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 W+QVLVF RTKHGA+ + + L +R++AIHGNKSQGARTRAL FK+GDI++LV Sbjct: 262 KTNKWKQVLVFARTKHGADKVVKILCHQHMRASAIHGNKSQGARTRALEGFKNGDIKILV 321 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+DI +LP+V+N +LPNV EDYVHRIGRTGRA G A+SLV +E LL+ I Sbjct: 322 ATDIAARGIDIHQLPYVINLDLPNVAEDYVHRIGRTGRAGEAGHAISLVAAEEALLLKAI 381 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 EK + +P++ + G+E +KAEP++ G Q++ + G+ + A Sbjct: 382 EKFIGNPLPKVDVVGFEQKI-LKAEPLKQGGQRQRRPSQSARPGQKAKT--------NHA 432 Query: 421 SAKPAEKPSRRLGDAKPAGEQQRRRR 446 S++ R+ + GE++ R+R Sbjct: 433 SSQQRRSDWRKSSNRSTQGERRTRQR 458 >UniRef50_D2LXV0 DEAD/DEAH box helicase domain protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LXV0_BACS4 Length = 500 Score = 570 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 140/399 (35%), Positives = 227/399 (56%), Gaps = 6/399 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L + P I+ A+ + G+ E TPIQ++ IP EG+D++ AQTGTGKT F +P ++ Sbjct: 4 FKDLNIQPSIVEAIEKMGFEETTPIQEKVIPLGKEGQDIIGQAQTGTGKTVAFGIPCVEQ 63 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 ++ + +AL+LTPTRELA Q+ E + + I++L ++GG I Q+ L Sbjct: 64 VVVE------EKHPQALVLTPTRELAIQVAEELNKLGQVKGIKALPIYGGQEITRQITAL 117 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 + ++VATPGR +D + ++ + ++I+VLDEAD ML MGFI DI +L ++P +RQ Sbjct: 118 KKRPQIIVATPGRYMDHMRRKTIRPEFLKIVVLDEADEMLSMGFIEDIETILQEVPGERQ 177 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 LLFSAT +K +A++ ++ P+ I V + + + Q + +K K + L +++ Sbjct: 178 TLLFSATMPPKLKTIADRFMNKPVSIAVKAKQLTVENIEQRYIALSEKEKFDTLCNLLDM 237 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 + ++F RTK + L E L+ G +HG+ Q R + + FK G I V+VAT Sbjct: 238 ETPELAIIFGRTKRRVDELTESLSIRGFAVEGLHGDMKQERRDQVIRKFKRGSIDVMVAT 297 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARGLD+ ++ HV+N++LP E YVHRIGRTGRA G + S V E LR IE+ Sbjct: 298 DVAARGLDVNDVSHVINFDLPQDSESYVHRIGRTGRAGKKGISYSFVTHKEKDHLRYIEE 357 Query: 363 LLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQ 401 ++++ ++ P + + N ++ + Sbjct: 358 STRQKMKQVDAPTLADAMRGRHKQAVNELKKAVNNAASK 396 >UniRef50_A2EVI2 DEAD/DEAH box helicase family protein n=1 Tax=Trichomonas vaginalis RepID=A2EVI2_TRIVA Length = 598 Score = 569 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 133/373 (35%), Positives = 217/373 (58%), Gaps = 2/373 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+ L L I + + + + +PTPIQ +IP L+G DL+ A+TG+GKTA F +P + Sbjct: 125 LTFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKGHDLIGIAKTGSGKTAAFLIPAM 184 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ ++P +G P+ L+L+PTRELA QI E + + L IR +FGG PQ Sbjct: 185 VHIGLQEPMYRGDGPI-VLVLSPTRELAQQIAEVAKGFCDNLMIRQTCLFGGAGRGPQAN 243 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR ++VATPGRL+D +++V LVLDEAD+MLDMGF IR+++ + Sbjct: 244 DLRHLPSLVVATPGRLIDFIEGGQCPMNRVNFLVLDEADQMLDMGFEPQIRKIIGHISKD 303 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 RQ ++FSAT+ +I+ LA L +P+ + + ++ T + + Q + ++ K + Sbjct: 304 RQTMMFSATWPKEIQQLAADFLVDPVHMIIGNKDLTTNSNIKQVITKCEEFEKLSKCLEV 363 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + ++++FT+TK + L E LN G ++ ++HG+K+Q R L F+S +L Sbjct: 364 LNEHKDDKIIIFTKTKRTTDDLQENLNMKGFQAYSLHGDKAQNQRDFVLGKFRSCKKGIL 423 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD+ ++ V+NY+ P E YVHRIGRT R G A++ + + R Sbjct: 424 VATDVAARGLDVNDIDIVINYDFPGDIETYVHRIGRTARGNKEGLAVTFFTDENKNMSRK 483 Query: 360 IEKLLKKEIPRIA 372 + K++ + + Sbjct: 484 LAKIMTQAKQELP 496 >UniRef50_B9SM44 Dead box ATP-dependent RNA helicase, putative n=2 Tax=Magnoliophyta RepID=B9SM44_RICCO Length = 650 Score = 569 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 160/389 (41%), Positives = 222/389 (57%), Gaps = 18/389 (4%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL- 60 +F + L + + Y +PTP+Q+ AIP L GRDLMA AQTG+GKTA F P++ Sbjct: 189 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIIS 248 Query: 61 --QHLITRQPHAKGRRP----VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVS 114 + + R ALIL+PTREL+ QI E R +S ++ +V +GG Sbjct: 249 GIMKMQGQSAQRPLRGARMVYPLALILSPTRELSMQIHEEARKFSYQTGVKVVVAYGGAP 308 Query: 115 INPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVL 174 IN Q+ +L GVD+LVATPGRL+DL + V L V L LDEADRMLDMGF IR+++ Sbjct: 309 INQQLRELERGVDILVATPGRLVDLLERARVSLQMVRYLALDEADRMLDMGFEPQIRKIV 368 Query: 175 TK----LPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK 230 + P RQ +LFSATF +I+ LA L N + + V R +++D + Q V FV + Sbjct: 369 EQNDMPRPGARQTMLFSATFPKEIQRLATDFLFNYIFLAVGRVGSSTDLIIQRVEFVQES 428 Query: 231 RKRELLSHMIGKG-------NWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGA 283 KR L ++ LVF TK GA+ L L +G + +IHG++SQ Sbjct: 429 DKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADSLEHWLYVNGFPATSIHGDRSQQE 488 Query: 284 RTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATG 343 R +AL F+SG+ +LVATD+AARGLDI + HVVN++LPN +DYVHRIGRTGRA +G Sbjct: 489 REQALRSFRSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSG 548 Query: 344 EALSLVCVDEHKLLRDIEKLLKKEIPRIA 372 A + L + L+++ + Sbjct: 549 LATAFFNEGNASLAMALADLMQESNQEVP 577 >UniRef50_C4V8Q7 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4V8Q7_NOSCE Length = 528 Score = 569 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 138/374 (36%), Positives = 216/374 (57%), Gaps = 3/374 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F+ ++L + + PTPIQ Q P L G+D++ AQTG+GKT F LP L Sbjct: 127 VKFEHAPFENEVLNNFKLKAFTSPTPIQAQGWPMALTGKDMVGIAQTGSGKTLSFVLPAL 186 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H + P G P+ L+L PTREL QI + +Y ++ N+R V+GGVS Q Sbjct: 187 IHARAQIPLRSGDGPI-VLVLAPTRELCLQIKDVFDEYCRFFNMRCTAVYGGVSSYTQKR 245 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 + G +V+V PGRL+DL Q A+ ++V LVLDEADRMLDMGF +++++ Sbjct: 246 DISMGCEVVVGCPGRLIDLNEQGALHFNRVTFLVLDEADRMLDMGFEPQLKKIIVNTNPD 305 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 RQ L++SAT+ +++ LAE + N +++ + + ++ Q V +D K L Sbjct: 306 RQTLMWSATWPKEVRRLAENYMKNFVQLTIGSVELKTNIKIKQIVSVIDSHEKANKLHES 365 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + ++V++F TK ++L + L++ G ++ AIHG+KSQ R R ++DF+SG +L Sbjct: 366 LNEKKNEKVIIFANTKRMCDNLEDDLSRRGYKAVAIHGDKSQNIRDRIISDFRSGYKNIL 425 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAA-ATGEALSLVCVDEHKLLR 358 +ATD+AARGLDI+ + V+NY+ PN EDYVHRIGRT R G + S + + Sbjct: 426 IATDVAARGLDIKNVALVINYDFPNNIEDYVHRIGRTARGDVTEGLSHSFFTSENSACAK 485 Query: 359 DIEKLLKKEIPRIA 372 ++ K+LK+ + Sbjct: 486 ELVKILKEANQDVP 499 >UniRef50_Q04VV9 ATP-dependent RNA helicase (Superfamily II) n=4 Tax=Leptospira RepID=Q04VV9_LEPBJ Length = 513 Score = 569 bits (1468), Expect = e-161, Method: Composition-based stats. Identities = 145/393 (36%), Positives = 226/393 (57%), Gaps = 7/393 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F L LS +I A+ E G+ E +PIQ +AIP +L+G+D++ AQTGTGKTA F +P + Sbjct: 4 LKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPAI 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 + L + ++ALIL PTREL Q+ E R KY + V+GG I Q+ Sbjct: 64 ELL------EVESKHLQALILCPTRELVIQVSEQFRKLMKYKGNFEVVPVYGGQEIERQL 117 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 LR +++ATPGR++D + +++L+ ++I+VLDEAD MLDMGF D+ +L P Sbjct: 118 KALRKNPQIVIATPGRMMDHMRRGSIRLNDIKIVVLDEADEMLDMGFREDMEFILKDTPI 177 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ ++FSAT ++DI L ++ +P I+V + ++ ++ Q + + + K E L+ + Sbjct: 178 DRQTIMFSATMTEDILTLMKRFQKHPQIIDVTHQKLSAPKIEQIYYEIQENAKGEALARL 237 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I N + LVF TK + + E L G + A+HG+ +Q R + + F++G+I +L Sbjct: 238 IEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMNGFRNGNIEIL 297 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+A RG+D+ + V NY+LP EDYVHRIGRTGRA G A S + + L+ Sbjct: 298 VATDVAGRGIDVNNVEAVFNYDLPRDGEDYVHRIGRTGRAGKKGIAFSFIVGKQIYNLKK 357 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQ 392 IE++ +I IP + K + + Sbjct: 358 IERINGIKIEAGKIPTLDDLEETKIHSYTSKVR 390 >UniRef50_B6BTD3 Dead/deah box helicase domain protein n=1 Tax=beta proteobacterium KB13 RepID=B6BTD3_9PROT Length = 444 Score = 569 bits (1468), Expect = e-161, Method: Composition-based stats. Identities = 171/436 (39%), Positives = 259/436 (59%), Gaps = 4/436 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF + G P I +A++ Y PTPIQ+Q IP VL G+D++ASAQTGTGKTA F LPLL Sbjct: 1 MSFSNFGFIPPIGKAISRINYSTPTPIQEQCIPVVLSGKDVLASAQTGTGKTAAFCLPLL 60 Query: 61 QHLITRQPHAKGRR-PVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 + + H R LIL+PTRELA QI + ++ +S +++ + V GGVS Q Sbjct: 61 NLVEKKPKHKHKRNISPDVLILSPTRELATQIEQELKRFSHFMDTNIVSVVGGVSYKLQN 120 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ V+ LVATPGRL+DL Q + L ++ LV+DEADRMLDMGFI DI+++ Sbjct: 121 KLLKSNVNFLVATPGRLMDLVKQRKINLKHIDALVIDEADRMLDMGFIPDIKKIFESTSQ 180 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFV-DKKRKRELLSH 238 +Q L+F+AT + I+ +A++ L +P I V + N ++ + Q + V D +K+ +L Sbjct: 181 DQQVLMFTATLNKQIEKIAQQFLKDPQRIAVEQENKSNKNIQQIAYPVADYNQKKLVLVD 240 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + + Q ++FT TK A+ L+++L RS +HG+ SQ RTR + FK+ +I++ Sbjct: 241 VLNEADLNQAIIFTATKREADRLSDELYLMNHRSKTLHGDMSQRERTRTINRFKNNEIQI 300 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARG+D++++ HV+N++LP EDY+HRIGRTGRA G+A+SLV E +L+ Sbjct: 301 LVATDVAARGIDVDDITHVINFDLPRQVEDYIHRIGRTGRAERKGKAISLVIDKEKFMLQ 360 Query: 359 DIEKLLKKEIPRIAI--PGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 IEK +I I + K + +++R G R + R+ G Sbjct: 361 KIEKYANIKIEVIKSTHSTSDLSLVYKKKESGFKKKRRSSGSRKKNDKFTSSSKRKKHGF 420 Query: 417 AKSASAKPAEKPSRRL 432 AK +P ++ Sbjct: 421 KADVKAKSRRRPVKKN 436 >UniRef50_Q4PFD9 Pre-mRNA-processing ATP-dependent RNA helicase PRP5 n=1 Tax=Ustilago maydis RepID=PRP5_USTMA Length = 1156 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 158/460 (34%), Positives = 254/460 (55%), Gaps = 10/460 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 + GL L + GY PTPIQ QA+PA++ GRD++ A+TG+GKT F LP+ +H Sbjct: 478 WSHCGLPASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRH 537 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + ++P PV +I+TPTRELA QI +R + K L +R+ V+GG I+ Q+ ++ Sbjct: 538 IKDQRPVEPSEGPV-GIIMTPTRELAVQIYREMRPFIKALGLRAACVYGGAPISEQIAEM 596 Query: 123 RGGVDVLVATPGRLLDLE---HQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 + D++VATPGRL+DL L +V LVLDEADRM DMGF + ++L + Sbjct: 597 KKTADIVVATPGRLIDLLTANSGRVTNLYRVTYLVLDEADRMFDMGFEPQVMKILNNIRP 656 Query: 180 KRQNLLFSATFSDDIKALAEKLLHN-PLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ +LFSATF +++LA K+L N PLEI V R+ + ++ Q V + K L Sbjct: 657 DRQTVLFSATFPKQMESLARKVLKNKPLEITVGGRSVVAAEIEQIVEVRSEDTKFHRLLE 716 Query: 239 MIGK----GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSG 294 ++G+ + L+F + A+ L + L + G + ++HG K Q R ++DFK+G Sbjct: 717 ILGELYNREKDARTLIFVDRQEAADDLLKDLIRKGYVTMSLHGGKDQVDRDETISDFKAG 776 Query: 295 DIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEH 354 ++ ++ AT +AARGLD+++L V+NY++PN EDYVHR GRTGRA G ++ + ++ Sbjct: 777 NVPIVTATSVAARGLDVKQLKLVINYDVPNHMEDYVHRAGRTGRAGQKGTCITFITPEQD 836 Query: 355 KLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE 414 + RDI LK + P E + E + G+ + G G G G + R Sbjct: 837 RYARDIIAALKASAAHVP-PELEAMAASFKEKLAAGKAKAAGSGFGGKGLDRFELDREKT 895 Query: 415 GGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 A+ ++ A+ ++ + ++ + P ++++ Sbjct: 896 LKAQKSAYGEADDDAKAAAAGDSSEDKAKTGAPPGASSSE 935 >UniRef50_A3EUK2 Putative ATP-dependent helicase n=2 Tax=Leptospirillum sp. Group II RepID=A3EUK2_9BACT Length = 444 Score = 568 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 186/447 (41%), Positives = 263/447 (58%), Gaps = 8/447 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F++LGLSP+ILRA+ + G+ PTPIQ+Q+IP V++GRDL+ AQTGTGKT GF LP+L Sbjct: 1 MTFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + H RAL+L+PTRELA QI + +DY+KYL+ ++++ GGV Q Sbjct: 61 HKIAEGRRHGIRN---RALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQER 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ D++VATPGRLLD +N + L ++++DEADRMLDMGF+ DI ++ +LP Sbjct: 118 NLKRNWDIVVATPGRLLDHVRRNNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPKG 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLSHM 239 RQ+LLFSAT I+ LA ++ + + V SD + Q V +K LL + Sbjct: 178 RQSLLFSATCPPRIQELAATFQNDAVIVRVEPERKGSDHIHQEWITVSHGSQKLGLLKKV 237 Query: 240 IGK--GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + + QV++FTRTK A L+ LN G S A+HG+KSQ R R L+ F+ GD++ Sbjct: 238 LDEGKSETGQVIIFTRTKRSAEDLSIALNDAGYPSDALHGDKSQPVRNRVLSRFRRGDLK 297 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 VLVATD+AARGLDI+ + HV+NY+LP EDYVHRIGRTGRA TG ALS + ++ Sbjct: 298 VLVATDVAARGLDIDGITHVINYDLPQTAEDYVHRIGRTGRAGRTGRALSFFHPADRDIV 357 Query: 358 RDIEKLLKKEIPRIA--IPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG 415 R IE + K IP IP E + + + RG+ R + + Sbjct: 358 RSIETMAGKPIPHSPHSIPLSEQSLRKTFTRRPSFGRPQDRTPRGENRFRTDRGQQGRPR 417 Query: 416 GAKSASAKPAEKPSRRLGDAKPAGEQQ 442 + S + A PA E++ Sbjct: 418 SSTSGNRFSYGNRKSSQNSATPAHEER 444 >UniRef50_Q3SF48 DEAD/DEAH box helicase n=7 Tax=cellular organisms RepID=Q3SF48_THIDA Length = 533 Score = 568 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 176/447 (39%), Positives = 240/447 (53%), Gaps = 4/447 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF LGL P IL++V GY TP+QQQAIPA L G DL+ S+ TG+GKTA F LP + Sbjct: 1 MSFSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSGKTAAFLLPSI 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 Q L+ R L+LTPTRELA Q+ + Y K + R+ + GG Q+ Sbjct: 61 QRLLAEPAVKSI--GPRVLVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGGAPYGLQL 118 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 +L VDV+VATPGRL+D + + ++E+LVLDEADRMLDMGF+ DI+ + + PA Sbjct: 119 KRLSQPVDVVVATPGRLIDHLERGKIDFSRLEVLVLDEADRMLDMGFVDDIKAIAARCPA 178 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLSH 238 +RQ LLFSAT + LA +L + IE+ ++ Q + F D K LL Sbjct: 179 ERQTLLFSATLDGVVGNLARELTRDAQRIEIEAVPHKEAKIEQRLLFADNMDHKNRLLDA 238 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ Q +VF TK +++ L + G S A+HG+ QG R RAL + G RV Sbjct: 239 LLRDVEMVQAIVFASTKRSTEEISDLLAESGFASDALHGDMQQGQRNRALQRLREGRTRV 298 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARG+D+ + HV+N++LP EDYVHRIGRTGRA TG A+S + E L++ Sbjct: 299 LVATDVAARGIDVASISHVINFDLPRQAEDYVHRIGRTGRAGRTGIAVSFAGMREGGLVK 358 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAK 418 +IE+ I +PG EP NGR + G G + G + Sbjct: 359 NIERYTGNRIEVHTLPGLEPTQRPSTGRPGNGRPRGNGPRGGYEKRSFGDRSEPRSYGDR 418 Query: 419 SASAKPAEKPSRRLGDAKPAGEQQRRR 445 + GDA+ RR Sbjct: 419 PRGDSRDNRDRGYRGDARRNDGAPARR 445 >UniRef50_Q11UP8 ATP-dependent RNA helicase (Cold-shock DEAD-box protein A) n=2 Tax=Bacteria RepID=Q11UP8_CYTH3 Length = 580 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 153/389 (39%), Positives = 233/389 (59%), Gaps = 7/389 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F LGLSP+++ A+ GY E TPIQ++ IP ++ G+DL AQTGTGKTA F +P + Sbjct: 1 MLFKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAI 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 +H+ ++LIL PTRELA Q+ ++ SK+ +R L V+GG SI Q+ Sbjct: 61 EHVDI------SINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQI 114 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ G ++V TPGR++D + + + ++LDEAD ML+MGF DI +LT+LP Sbjct: 115 RDLKAGAHIVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLNMGFREDIELILTRLPE 174 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ +LFSAT + I ALA++ +NP I++ R+ V Q + V +K E+++ + Sbjct: 175 ERQTVLFSATLAPPILALAKRFQNNPEIIKIERKELTISTVEQFYYLVKNSQKTEIVTQI 234 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I N Q +L+F TK + ++L G ++HG+K+Q RT ++ F+ G +L Sbjct: 235 IDLNNLQLMLIFCNTKRKVEEVTDELKAYGHNPISLHGDKTQRDRTEVMSKFRKGLANIL 294 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D+ + V+NY++P E+YVHRIGRTGRA G++ +LV DE LRD Sbjct: 295 VATDVAARGIDVTGVDAVINYDVPLDIENYVHRIGRTGRAGQLGKSFTLVTSDEKYKLRD 354 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQ 388 IE+ K I + P + + K + + Sbjct: 355 IERYTKATIEKAETPTRQELVAYKKDKLA 383 >UniRef50_A7HKQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HKQ8_FERNB Length = 571 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 147/395 (37%), Positives = 229/395 (57%), Gaps = 6/395 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLE-GRDLMASAQTGTGKTAGFTLPLLQ 61 F+ GLS +IL A+ ++GY +PT IQ+ +P L +DL+A AQTGTGKTA F +PLL+ Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLLE 79 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + K + V+A+I+TPTRELA QI E ++ ++ ++GG S+ Q Sbjct: 80 RID-----FKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKD 134 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GVD++V TPGR++D +++ + L VE LVLDEADRMLDMGF+ D+ ++ + + Sbjct: 135 LEKGVDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLDMGFLDDVLEIIKRTGENK 194 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 + LFSAT +I +A K + + + + ++ Q VD+K K LL +I Sbjct: 195 RTFLFSATMPKEIVDIARKFMKEYIHVSTVKDELTTENAEQLYFEVDEKDKLPLLCRIID 254 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 +VF +TK + ++++L G + +HG+ SQ R R L F+ +R+LV Sbjct: 255 MNPDFYGIVFCQTKLEVDEISKKLLDLGYNADGLHGDYSQYQRERVLDKFRKKQLRILVT 314 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARG+DI+ L HV+NY +P PE YVHRIGRTGRA G A++ V D++ ++ Sbjct: 315 TDVAARGIDIDGLTHVINYSVPRDPEYYVHRIGRTGRAGKKGFAITFVTRDDYFHFARVK 374 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGG 396 + K +I + +IP E + + E + + + Sbjct: 375 RFAKAKIIKDSIPQVEDILNRQLEKLLDTLKNAPK 409 >UniRef50_Q9P7C7 Pre-mRNA-processing ATP-dependent RNA helicase prp11 n=1 Tax=Schizosaccharomyces pombe RepID=PRP11_SCHPO Length = 1014 Score = 567 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 166/452 (36%), Positives = 247/452 (54%), Gaps = 9/452 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 S+ GLS + + GY +PT IQ QAIPA+ GRD++ A+TG+GKT F LP+ + Sbjct: 419 SWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFR 478 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ ++P G P+ A+I+TPTRELA QI + + K LNIR+ +GG I Q+ Sbjct: 479 HIKDQRPLKTGEGPI-AIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIAD 537 Query: 122 LRGGVDVLVATPGRLLDLEHQ---NAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ G +++V TPGR++D+ L + LVLDEADRM D+GF + R++ + Sbjct: 538 LKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIR 597 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ +LFSATF ++ALA K+L P+EI V R+ + +V Q V ++ K L Sbjct: 598 PDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASEVEQIVEVRPEESKFSRLLE 657 Query: 239 MIGKGNWQ----QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSG 294 ++G+ + LVF + A+ L L K G S +IHG K Q R ++D+K+G Sbjct: 658 LLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAG 717 Query: 295 DIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEH 354 VL+AT + ARGLD++ L VVNY+ PN EDYVHR+GRTGRA TG A++ + ++ Sbjct: 718 VFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQE 777 Query: 355 KLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE 414 K DI K LK + + S E ++ G+++ GGG G G + R E Sbjct: 778 KYAVDIAKALKMSKQPVPKE-LQTLASQFLEKVKAGKEKAAGGGFGGKGLSRLDETRNAE 836 Query: 415 GGAKSASAKPAEKPSRRLGDAKPAGEQQRRRR 446 + + E+ +AK E+ + Sbjct: 837 RKMQRKAYGEDEEDVETEAEAKSPLEKITPEK 868 >UniRef50_Q1MY97 DEAD/DEAH box helicase-like protein n=1 Tax=Bermanella marisrubri RepID=Q1MY97_9GAMM Length = 614 Score = 567 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 175/466 (37%), Positives = 252/466 (54%), Gaps = 20/466 (4%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F SLGL ++LRA+ EQGY +P+PIQ+Q+IP +LEG+D++ AQTGTGKTA FTLPLL Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKY-LNIRSLVVFGGVSINPQMMK 121 R + L+L PTRELA Q+ V YSK+ N++ ++GG Q Sbjct: 68 ------TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRA 121 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G +V TPGR++D + +KL+ + +VLDEAD ML MGFI D+ VL ++P KR Sbjct: 122 LKQGPQWVVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVPEKR 181 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT IKA+AEK L P EI + + ++ + Q V K + L + Sbjct: 182 QIALFSATMPKQIKAVAEKHLREPTEIRIKSKTATNESIEQKYWLVKGVDKNQALLRICE 241 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + ++VF RTK +A+ + G+R A++G+ +Q R RA+ K G + +LVA Sbjct: 242 TSEFDAMMVFVRTKQATEEVADYMRSHGLRCEALNGDVAQAQRERAVDRLKKGQVDMLVA 301 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + HVVNY++P E YVHRIGRTGRA +GEA+ V E ++L IE Sbjct: 302 TDVAARGLDVERISHVVNYDIPYDAESYVHRIGRTGRAGRSGEAILFVRPRERRMLSTIE 361 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQ-------NGRQQRGGGGRGQGGGRGQQQPRRGE 414 ++ +K+I +I +P + + + + + GR Q E Sbjct: 362 RVTRKKIQQIELPTAKEVNAKRRDQFKVRALEHIEGRDIEIFKKIASEILAEQPALDPIE 421 Query: 415 GGAKSASAKPAEKP------SRRLGDAKPAGEQQRRRRPRKPAAAQ 454 A A KP R GE+ R+ R + + Sbjct: 422 LAAAFAQMSQGNKPLFMDESEPRFKPETDRGERGERKERRNNSGRE 467 >UniRef50_UPI000186EE68 DEAD box ATP-dependent RNA helicase, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186EE68 Length = 755 Score = 567 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 134/398 (33%), Positives = 214/398 (53%), Gaps = 21/398 (5%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ +++ + +QG+ +PT IQ Q P L GRD++ AQTG+GKT + LP Sbjct: 144 TFEESNFPANVMAVIKKQGFLKPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYALPATV 203 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ ++P +KG P+ AL+L PTRELA QI +D+ +IR+ +FGG Q Sbjct: 204 HITNQKPLSKGDGPI-ALVLAPTRELAQQIQSVAKDFGASCSIRNTCIFGGAPKGSQARD 262 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GV++++ATPGRL+D + L + LVLDEADRMLDMGF IR+++ ++ R Sbjct: 263 LERGVEIVIATPGRLIDFLDKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 322 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMI 240 Q L++SAT+ +++ LAE LH+ ++I + + A+ + QHV + K L++++ Sbjct: 323 QVLMWSATWPKEVQTLAEDFLHDYIQINIGSLSLAANHNIRQHVEVMQDSEKEGRLTNLL 382 Query: 241 GKGNWQQ---VLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + +L+F TK + +A + ++G + +HG+KSQ R L +F+SG Sbjct: 383 RDIGGDRNNKILIFVETKKKVDDIARLVKQEGFPAICMHGDKSQQERDHVLNEFRSGKCA 442 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 VLVATD+AARG ++ H YVHRIGRTGR++ G A + + Sbjct: 443 VLVATDVAARG----KIRH------------YVHRIGRTGRSSQMGTAFTFFTPQNARQA 486 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRG 395 + + +L++ I E + P G Sbjct: 487 KGLVAVLEEASQPINPKVTELLAATTKGPTPEPTNNYG 524 >UniRef50_A8WWC4 C. briggsae CBR-VBH-1 protein n=2 Tax=Caenorhabditis briggsae RepID=A8WWC4_CAEBR Length = 692 Score = 567 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 160/401 (39%), Positives = 231/401 (57%), Gaps = 30/401 (7%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F G P ++ V GY +PTP+Q+ +IP +L RDLM+ AQTG+GKTA F LP++Q Sbjct: 164 NFSDAGFGPAVMENVTRSGYTKPTPVQKHSIPTLLFNRDLMSCAQTGSGKTAAFLLPIIQ 223 Query: 62 HLIT----------------------RQPHAKGRRP--VRALILTPTRELAAQIGENVRD 97 H++ + GRR AL+L+PTRELA QI + Sbjct: 224 HIMAGGPDMIKTVSSATNIFGFKVILQPTFNNGRRTYYPSALVLSPTRELAIQIHKEAAK 283 Query: 98 YSKYLNIRSLVVFGG-VSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLD 156 +S N+++ +++GG + Q+ +LR GV +L+ATPGRL+D+ Q + L LVLD Sbjct: 284 FSYKTNLQTAILYGGRENYRDQVNRLRSGVHILIATPGRLIDIIEQGFIGLSGCRYLVLD 343 Query: 157 EADRMLDMGFIHDIRRVLTK-LPAK--RQNLLFSATFSDDIKALAEKLLH-NPLEIEVAR 212 EADRMLDMGF IR+++ + +P K R +FSATF +I+ LA+ L N + + V R Sbjct: 344 EADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQLLAKDFLKENYVFLAVGR 403 Query: 213 RNTASDQVTQHVHFVDKKRKRELLSHMIGKGN-WQQVLVFTRTKHGANHLAEQLNKDGIR 271 + S+ + Q + +V++ KR+ L ++ + VLVF TK GAN LA LN+ IR Sbjct: 404 VGSTSENIEQRLLWVNEMEKRQNLMDILMNEDATNLVLVFVETKRGANELAYFLNRQQIR 463 Query: 272 SAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVH 331 S +IHG+ Q R R L F+SG +LVAT +AARGLDI + HVVNY+LP ++YVH Sbjct: 464 SVSIHGDLKQIERERNLEMFRSGQFPILVATAVAARGLDIPNVRHVVNYDLPGDSDEYVH 523 Query: 332 RIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIA 372 RIGRTGR G A S + RD++ L+ + + Sbjct: 524 RIGRTGRCGNLGIATSFFNDKNRGIGRDLKTLIMEANQEVP 564 >UniRef50_D2V713 ATP-dependent RNA helicase n=1 Tax=Naegleria gruberi RepID=D2V713_NAEGR Length = 629 Score = 567 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 153/385 (39%), Positives = 228/385 (59%), Gaps = 15/385 (3%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L P +++ + G+ +PTP+Q+ +IP VL GRDL++ AQTG+GKT F P++ + Sbjct: 154 FKEANLPPKLMQNIERAGFGKPTPVQKHSIPIVLAGRDLLSCAQTGSGKTCAFLFPIISN 213 Query: 63 LITRQPHAKGRRPV----------RALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGG 112 L+T+ + LI+ PTREL+ QI + R ++ + R++V +GG Sbjct: 214 LMTQPGYETVMPHPELMDTLVTCPSVLIMAPTRELSTQIYDESRKFTYHTGRRTVVAYGG 273 Query: 113 VSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRR 172 +I Q+ +L G D+LVATPGRL+DL + ++ L V+ LVLDEADRMLDMGF IR Sbjct: 274 AAIQYQLKQLERGCDILVATPGRLVDLIDRGSISLHNVQYLVLDEADRMLDMGFEPQIRY 333 Query: 173 VLTKL----PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVD 228 ++ K P +R L+FSATF +I+ LA LHN L + V R + + + Q + Sbjct: 334 IVEKTGMPAPGQRITLMFSATFPKNIQTLARDFLHNNLNLTVGRVGSTHENILQKFVYCK 393 Query: 229 KKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRAL 288 KR+L+ I LVF +TK A+ L L K+G +S++IHG+K+Q R AL Sbjct: 394 DDEKRDLMLEAIASVET-LTLVFVKTKKEASILEYFLMKNGFKSSSIHGDKTQRERETAL 452 Query: 289 ADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSL 348 +F+ G +LVATD+A+RGLDI ++ HV+NY+LP EDYVHRIGRTGRA TG + S Sbjct: 453 ENFRRGITPILVATDVASRGLDINDVGHVINYDLPENIEDYVHRIGRTGRAGNTGISTSF 512 Query: 349 VCVDEHKLLRDIEKLLKKEIPRIAI 373 +++ D+ +L++ + Sbjct: 513 FTDKNNQIADDLITVLEEAKQEVPP 537 >UniRef50_A8IAJ3 Helicase n=4 Tax=Alphaproteobacteria RepID=A8IAJ3_AZOC5 Length = 582 Score = 567 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 203/490 (41%), Positives = 263/490 (53%), Gaps = 40/490 (8%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF LGLS +L AVA GY PTPIQ QAIP VL RD++ AQTGTGKTA FTLP+L Sbjct: 64 MSFSELGLSEKVLSAVAATGYTTPTPIQAQAIPHVLARRDVLGLAQTGTGKTAAFTLPML 123 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + A R R LIL PTRELAAQ+ EN Y K + ++ GGVS Q Sbjct: 124 TLLEQGRARA---RMPRTLILEPTRELAAQVEENFVRYGKNHKLNVALLIGGVSFGDQDT 180 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL GVDVL+ATPGRLLD + + L +E+LV+DEADRMLDMGFI DI R+ +P Sbjct: 181 KLLRGVDVLIATPGRLLDHVERGRLLLSGIEVLVIDEADRMLDMGFIPDIERICKLVPFT 240 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHF--VDKKRKRELLSH 238 RQ L FSAT +I+ L + L NP+ +EV++ +A+ +TQ + + KRE L Sbjct: 241 RQTLFFSATMPPEIQRLVSQFLSNPVRVEVSKPASANTSITQLLVASGREDYEKRETLRE 300 Query: 239 MIGKGNW-QQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 +I + Q +VF K + L K G +HG+ Q ART+AL F++G+ Sbjct: 301 LIRNADQLQNGIVFCNRKRDVAVVHRSLQKHGFNVVCLHGDMDQHARTQALDQFRTGEAT 360 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVA+D+AARGLDI + HV NY++P+ EDYVHRIGRTGRA TG A+ LV D+ K L Sbjct: 361 LLVASDVAARGLDIPAVSHVFNYDVPHHSEDYVHRIGRTGRAGRTGTAIMLVTHDDAKSL 420 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKA-----------------EPIQNGRQQRGGGGRG 400 IEKL+ IP P E P K + GR +R Sbjct: 421 AAIEKLIGNAIPWQGEPLGEAPPREKRSRGGDRREERGERSERNKRSGRGRSERKAEVED 480 Query: 401 QGGGRGQQQPRRGEGGA-----------------KSASAKPAEKPSRRLGDAKPAGEQQR 443 R ++ PR G + E+ +R +A+P GE+ R Sbjct: 481 GVEVRAERAPRPAREGRPEREPRPEREPRAERQPRPEREARPEREARPEREARPEGERAR 540 Query: 444 RRRPRKPAAA 453 + RP AA Sbjct: 541 KPRPETADAA 550 >UniRef50_Q2NB74 DNA and RNA helicase n=7 Tax=Alphaproteobacteria RepID=Q2NB74_ERYLH Length = 492 Score = 567 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 197/449 (43%), Positives = 271/449 (60%), Gaps = 8/449 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD LGLS +L+A+ +GY EPTPIQ QAIP VLEGRDL+ AQTGTGKTA F LP + Sbjct: 5 TFDQLGLSQPVLQALDMKGYNEPTPIQAQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSID 64 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L + R L+L PTRELA QI ++ +DY ++ + GG S+ K Sbjct: 65 RLREADNQTPFK-SCRMLVLAPTRELAGQIAQSAKDYGAMAGLKVHSIVGGTSVGKDRNK 123 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L G D+LVATPGRLLDL Q A KL+ VEILVLDEAD+MLD+GFIH +R++ +PA+R Sbjct: 124 LHRGTDILVATPGRLLDLIDQKAFKLNAVEILVLDEADQMLDLGFIHALRQINDLVPAER 183 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q L FSAT I+ L K NP+++ V T ++++ Q++ V + K+ L+ ++ Sbjct: 184 QTLFFSATMPKQIQELVGKYCRNPVKVSVTPAATTAERIDQYLFMVQQDEKQALIEMILK 243 Query: 242 KG-----NWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 +++LVFTRTKHGA+ + ++L + GI S AIHGNKSQ R RAL +FK Sbjct: 244 GRHAVPGKQERILVFTRTKHGADRVVKKLRQAGIESNAIHGNKSQPQRQRALDEFKRAKT 303 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 +L+ATD+AARG+DI + HV+NYELPNVPE YVHRIGRT RA G A++ DE Sbjct: 304 PILIATDVAARGIDIPGVSHVINYELPNVPEQYVHRIGRTARAGKDGVAIAFCAEDERAY 363 Query: 357 LRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRG--E 414 L+DI+K E R+ +P P + ++QRG + + R Q R + Sbjct: 364 LKDIQKNTDAEFDRLPLPENFRAVVEGVGPTKREQKQRGPRIKPKPKARKQGGTNRSKPQ 423 Query: 415 GGAKSASAKPAEKPSRRLGDAKPAGEQQR 443 GG ++ P E P ++ G +K ++ Sbjct: 424 GGNPQSAGGPVENPVKKQGTSKQKHPARK 452 >UniRef50_C7MN05 DNA/RNA helicase, superfamily II n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MN05_CRYCD Length = 551 Score = 567 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 190/460 (41%), Positives = 265/460 (57%), Gaps = 20/460 (4%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS L AV GY +PTP+Q+QAIPAVL GRD++A+A+TGTGKTA F+LP + Sbjct: 4 TFHDLGLSEKALAAVDLLGYTDPTPVQEQAIPAVLAGRDVIAAAKTGTGKTAAFSLPTMD 63 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L HA+ + LI+TPTRELA QI R +K R V GGVS NPQ+ Sbjct: 64 RL----GHARHGQGPLLLIVTPTRELALQIESVCRTIAKRSGHRVTCVVGGVSYNPQIDS 119 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR G DVL+ATPGRL+DL +Q+A L+QVE LVLDEADRMLDMGF+ D+RR++ P +R Sbjct: 120 LRRGTDVLIATPGRLIDLMNQDAAHLNQVETLVLDEADRMLDMGFLPDMRRIVAACPTQR 179 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT I+ LL+NP+ +E+A R +D + Q+ VD + K +LL ++ Sbjct: 180 QTLLFSATIDSAIEDNMAHLLNNPVFVEIAHRGETADTIEQYRIPVDHRHKNDLLIALLN 239 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +++VF RT+H + +L K G IH ++SQ R RA+ ++G +LVA Sbjct: 240 ERGGTRIIVFARTRHRVDTCVRKLRKAGFAVEPIHSDRSQNQRKRAIEALEAGKCDILVA 299 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+ ARG+DI + +VVN ++P+ EDYVHRIGRTGRA G A+S V + +LRDI+ Sbjct: 300 TDVLARGIDIPNVNYVVNLDMPDQVEDYVHRIGRTGRAGEAGCAISFVTPENKAILRDIQ 359 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGR----------------QQRGGGGRGQGGGR 405 KL+ K+IP +++ ++ S A + R + R + R Sbjct: 360 KLIGKDIPEMSVESFDSSASDNALAAKATRANAQNDPELATAAREDKSRKKAKSSRSSRR 419 Query: 406 GQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRR 445 + GG + P S R + E +R Sbjct: 420 EHNTEDQRAGGQQRGHKNPRGNKSNRNNSERHFDESERSE 459 >UniRef50_D1B4W7 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=D1B4W7_SULD5 Length = 583 Score = 567 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 151/394 (38%), Positives = 233/394 (59%), Gaps = 7/394 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+S GL DIL+A+ E G+ EP+P+Q +AIP VL+G D++A AQTGTGKTA F LP + Sbjct: 3 TFESFGLHQDILKAINEAGFTEPSPVQAEAIPLVLQGHDIVAQAQTGTGKTAAFGLPTMS 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + Q V+ L++TPTRELA Q+ + + ++ I+++ ++GG S + Q+ Sbjct: 63 MIDANQ------NRVQLLVITPTRELATQVSDELYSLGRFCGIKTVTIYGGSSYSRQIGL 116 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 + G V+VATPGR+LDL + +++VLDEAD MLDMGF+ DI + T LP +R Sbjct: 117 IEKGASVIVATPGRMLDLLKNGRLPGFAPKMVVLDEADEMLDMGFLEDIEEIFTYLPKER 176 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT + IK LA K+LH P + + ++ T ++ + Q + +++ + + + ++ Sbjct: 177 QTLLFSATMPEPIKRLASKILHEPKFVSITPKDHTTNEDIEQLYYVINEYERDDAMIRLL 236 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++ +VF RTK + L+ QL G + +HG+ Q R + F+S I +LV Sbjct: 237 DALEPEKSIVFCRTKKEVDRLSTQLMAVGYAAKGLHGDMEQNQRESVIKAFRSSQIEILV 296 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGL++ ++ HV NY +P PE YVHRIGRTGRA G A++LV E ++ I Sbjct: 297 ATDVAARGLNVADISHVFNYHMPFDPESYVHRIGRTGRAGKKGTAITLVTPIEFHSMQRI 356 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQR 394 K + +I +P K I + + Sbjct: 357 GKKVGSKIEHRIVPNLRDVKENKLIKIADDIKNA 390 >UniRef50_B8FPB9 DEAD/DEAH box helicase domain protein n=12 Tax=Bacteria RepID=B8FPB9_DESHD Length = 428 Score = 567 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 202/420 (48%), Positives = 268/420 (63%), Gaps = 11/420 (2%) Query: 4 DSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHL 63 + L + I +A+A QGY E TPIQ +AIP +LEG DL+ AQTGTGKTA F +P+LQ L Sbjct: 7 NELKIINPIQKALAAQGYSEATPIQAEAIPHLLEGLDLLGCAQTGTGKTAAFAIPILQSL 66 Query: 64 ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLR 123 Q KG+R +RAL+L PTRELA QI E+ Y L +R+LV+FGGV PQ KL Sbjct: 67 AMGQGLLKGKRQIRALVLAPTRELATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKLE 126 Query: 124 GGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQN 183 G+D+LVATPGRLLDL +Q + L VE VLDE D+MLDMG +HD++R++T LP +RQN Sbjct: 127 KGIDILVATPGRLLDLINQGFIDLSHVEHFVLDETDQMLDMGMLHDVKRIITYLPRERQN 186 Query: 184 LLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKG 243 +LFSAT +I+ LA+ +L P++I + + D + Q V+FVDK K LL++ + Sbjct: 187 MLFSATMPVEIEKLADTILKGPVKIAMTPEFSPLDIIEQEVYFVDKANKAALLTYWLKNN 246 Query: 244 NWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATD 303 + VLVF+RTKHGA+ + ++LNK G + AIHGNKSQ R +AL FK R+LVATD Sbjct: 247 EYDSVLVFSRTKHGADKIVKELNKKGFTAVAIHGNKSQANREQALHAFKKRKTRILVATD 306 Query: 304 IAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKL 363 IAARGLDI+EL HV+NY LP VPE Y+HRIGRTGRA G+A++ +E LLRDI+K Sbjct: 307 IAARGLDIQELSHVINYNLPEVPETYIHRIGRTGRAGLGGKAITFCDFEEKPLLRDIQKR 366 Query: 364 LKKEIPRIA-----------IPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRR 412 + K +P + +P + A Q + QG R + PR+ Sbjct: 367 IGKTLPEVKEHPYPLVNTVIVPKAKTSQQAAAARPQKPATAKTAAYSQQGAHRAKPNPRK 426 >UniRef50_A0Z0M4 ATP-dependent RNA helicase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z0M4_9GAMM Length = 582 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 175/473 (36%), Positives = 252/473 (53%), Gaps = 29/473 (6%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F+SLGL + + GY TPIQ IP +LEGRD++ AQTGTGKTA F LP+L + Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMMK 121 + + R +AL+L PTRELA Q+ E R Y + + +R L +FGG + Q+ Sbjct: 71 IDVK------VRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKS 124 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR G ++VATPGRLLD + ++ L + +VLDEAD ML MGFI D+ +L K P +R Sbjct: 125 LREGTHIVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFIDDVDTILAKTPKER 184 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 + LFSAT ++ +A K L NP EI VA T ++ + Q K E L ++ Sbjct: 185 KVALFSATMPKRVRDIANKHLSNPAEISVAAAATTNENIEQCYWLAKGASKLEALKRLLA 244 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + + V+VFTRT+ +AEQL + G++++ ++G+ Q R R ++D KSG + VLVA Sbjct: 245 FEDTEGVIVFTRTRESTTVIAEQLRQTGLKASPLNGDMDQKMRLRTVSDLKSGALDVLVA 304 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + HV+NY++P E YVHRIGRTGRA G+A+ V E ++LR+IE Sbjct: 305 TDVAARGLDVERITHVINYDVPFDEEAYVHRIGRTGRAGRKGKAILFVVPRERRMLRNIE 364 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQ----------------------NGRQQRGGGGR 399 +L ++ IP I +P + + E N Sbjct: 365 RLTRQSIPEIKLPSVLAIDAKRREAFADSIRTALADPMQAELEEIIDTLNKDSDYRSIAV 424 Query: 400 GQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAA 452 G +G AK P R + ++RR+ +K AA Sbjct: 425 ALAGMLHSPGASKGPKHAKGEKHTPYGTRDARDEKSSKPNRKERRQGLQKKAA 477 >UniRef50_Q6AMK6 Probable ATP-dependent RNA helicase n=1 Tax=Desulfotalea psychrophila RepID=Q6AMK6_DESPS Length = 632 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 171/484 (35%), Positives = 255/484 (52%), Gaps = 48/484 (9%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L D++ + + G+ +PTPIQ++AIP +L G DL+ AQTGTGKTA F LPLL + Sbjct: 57 FTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLNN 116 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + ++ V+AL+L PTRELA Q+G+ + YS LVV+GG S Q+ L Sbjct: 117 IDF------SKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGL 170 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 R G V+V TPGRLLDL Q ++KLDQ++ LVLDEAD ML MGFI DI +L++ P RQ Sbjct: 171 RRGARVVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPKDRQ 230 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 +LFSAT S + ++A + LH+P I ++ + + Q + ++ K ++ + Sbjct: 231 TMLFSATLSSRVMSIANRYLHSPESISISPKQMIGSSIEQRYYLINNSDKIAAITRVFEV 290 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 + L+F RT+ + LA +L G + + G+ SQ ARTR L+ FK G I+VLVAT Sbjct: 291 ETVESALIFARTRATVSELANELISRGFAAEGLSGDLSQEARTRVLSRFKKGQIKVLVAT 350 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARGLDI+++ HV NY+LP PE YVHRIGRTGRA +G A+SLV + + + R IE+ Sbjct: 351 DVAARGLDIDDISHVFNYDLPEDPEVYVHRIGRTGRAGRSGTAISLVTLRDRWMHRRIEQ 410 Query: 363 LLKKEIPRIAIPGYEPDPSIKAEPI----------------------------------- 387 K++ + +P E + Sbjct: 411 YTGKKLIKGELPTVEQIEEHRNTQFLERLDVWIRRGRCRGEREIVEALVEQGMDPLDVAA 470 Query: 388 -------QNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGE 440 ++ ++ + G + +RG+ + A+ + +P G Sbjct: 471 AALKIVRKDETKRPIDPIKPVIEDAGGRNRKRGDRNDRGANGRGDRGGRSDSRGGRPQGR 530 Query: 441 QQRR 444 + R Sbjct: 531 RDDR 534 >UniRef50_A6RW79 Pre-mRNA-processing ATP-dependent RNA helicase prp5 n=2 Tax=Fungi/Metazoa group RepID=PRP5_BOTFB Length = 1151 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 152/441 (34%), Positives = 241/441 (54%), Gaps = 10/441 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 + GL L + + GY PT IQ QAIPA++ GRD++ A+TG+GKT F LP+ +H Sbjct: 556 WSQCGLDVKSLDVITKLGYERPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRH 615 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + ++P P+ LI+TPTRELA QI + + + K + +R++ +GG I Q+ L Sbjct: 616 IRDQRPLKGSDGPI-GLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAIIKDQIADL 674 Query: 123 RGGVDVLVATPGRLLDLEHQ---NAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 + G +++V TPGR+++L L +V +VLDEADRM DMGF + +V + Sbjct: 675 KRGAEIIVCTPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMKVFNNIRP 734 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ +LFSAT + ALA+K L +P+EI V R+ + ++TQ V ++K K L + Sbjct: 735 NRQTILFSATMPRIMDALAKKTLQSPVEIVVGGRSVVAPEITQIVEVREEKEKFHRLLEL 794 Query: 240 IGK----GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295 +G+ + L+F + A+ L + L + G +IHG K Q R + DFK+G Sbjct: 795 LGELYNTDEDARTLIFVDRQEKADDLLKDLMRKGYPCMSIHGGKDQVDRDSTIDDFKAGV 854 Query: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK 355 + +++AT +AARGLD+++L VVN++ PN EDYVHR GRTGRA TG A++ + ++ + Sbjct: 855 VPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQEQ 914 Query: 356 LLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG 415 I K L++ + + +++G ++ G RG+G R R Sbjct: 915 YSVGIAKALEQSGQEVP-DRLNEMRKSYKDKVKSGAKKESSGFRGKGLERF-DAEREATK 972 Query: 416 GAKSASAKPAEKPSRRLGDAK 436 + + P + LG K Sbjct: 973 ARELVQPAASTAPPKLLGVPK 993 >UniRef50_B8J1L5 DEAD/DEAH box helicase domain protein n=3 Tax=Bacteria RepID=B8J1L5_DESDA Length = 595 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 154/393 (39%), Positives = 229/393 (58%), Gaps = 8/393 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF+ LGLS ++L+AV + G+ EP+PIQ A+P +L G D AQTGTGKTA F LP+L Sbjct: 4 SFEELGLSRELLKAVEDMGFEEPSPIQVLAVPCLLAGNDAFGQAQTGTGKTAAFGLPILD 63 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 L R +ALIL PTRELA Q+ E + + + + L ++GG I Q+ Sbjct: 64 KL-------TPERNTQALILCPTRELAIQVAEELNKLAAHKRGVAILPIYGGQPIERQLR 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GV V+V TPGR++D + ++L Q + VLDEAD MLDMGF DI +L + PA Sbjct: 117 ALAKGVQVVVGTPGRVMDHLKRGTLRLSQASMAVLDEADEMLDMGFREDIEAILEQTPAS 176 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q +LFSAT I+ L+++ L P + VA++ + Q + V +K + L ++ Sbjct: 177 CQRVLFSATVPPAIRELSKRFLREPEMLTVAQKMLTVPAIEQIYYEVRPHQKMDALCRLL 236 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + LVF TK GA+ + L + G +S ++HGN +Q R R + F++ + VLV Sbjct: 237 DSRAFHKALVFCSTKRGADEVTTHLQQRGYQSDSLHGNLAQSQRDRVMQRFRAEGLDVLV 296 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD++++ V+NY++P+ E YVHRIGRTGRA G A + V + EH +RDI Sbjct: 297 ATDVAARGLDVDDVDAVINYDIPHDVEKYVHRIGRTGRAGRVGSAFTFVTMREHYKMRDI 356 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQ 393 + + I +P +I+ + + +Q Sbjct: 357 IRCTRARITEGRLPSLRDVDNIRTSRLLDEVRQ 389 >UniRef50_C6HUU6 Putative ATP-dependent helicase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUU6_9BACT Length = 472 Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 181/451 (40%), Positives = 259/451 (57%), Gaps = 6/451 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF++LGL+PD+LRA+++ + PTPIQ+Q IP ++EGRD++ AQTG+GKT GF LP L Sbjct: 1 MSFETLGLNPDLLRALSDLKHESPTPIQKQTIPPIIEGRDVLGVAQTGSGKTGGFLLPSL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + R + L+L+PTRELA QI + R+Y KYL R++++ GG + Q+ Sbjct: 61 HR---NKRAQGNRTRHQILVLSPTRELAGQIERSAREYGKYLRSRTVLLVGGTDMRRQID 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR D+++ATPGRL+D + + L V +VLDEADRMLDMGF+ D+ +L L + Sbjct: 118 FLRRPWDLVIATPGRLIDHMQRGTINLSHVHTVVLDEADRMLDMGFLPDVETILKALHPE 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK-RKRELLSHM 239 RQ LLF+AT I+ L + +P+ I + + + Q V + +K LL + Sbjct: 178 RQTLLFTATLPARIQMLTKTYQKDPVLIRLETASAPPVSIDQEVVAISHGAQKWGLLKTI 237 Query: 240 IGKGN--WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + + Q L+FTRTK GA LA QL +G S A+HG+KSQ R R L+ F++G R Sbjct: 238 LTEPQTTEGQTLIFTRTKRGAEDLANQLLAEGFPSDALHGDKSQSQRNRVLSKFRAGQTR 297 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVATD+AARGLDI+ + V+NY+LP PEDYVHRIGRTGRA +G A+S + LL Sbjct: 298 ILVATDVAARGLDIDTVTCVINYDLPQSPEDYVHRIGRTGRAGRSGRAISFCHPADRNLL 357 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 RDIE+LL +P + + R G G G R + GEG Sbjct: 358 RDIERLLGSSVPVSPLSPPPQPKGDRPFRSSGPRSSGGPRPGGFRGERTFRSDAPGEGRP 417 Query: 418 KSASAKPAEKPSRRLGDAKPAGEQQRRRRPR 448 ++P+ G ++ ++ PR Sbjct: 418 GFRQGGRTDRPAGGSGRSEWRRDKPAGHGPR 448 >UniRef50_C6E4K1 DEAD/DEAH box helicase domain protein n=9 Tax=Proteobacteria RepID=C6E4K1_GEOSM Length = 490 Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 162/443 (36%), Positives = 245/443 (55%), Gaps = 8/443 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L + ++ + + E G+ + TPIQ++A+P L G+D+ AQTGTGKTA F + + Sbjct: 1 MKFTELKIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIF 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L+++ G RALIL PTREL QI ++ + KY ++GGV Q Sbjct: 61 TKLLSQAKTG-GEHHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRD 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA- 179 L+ G D+++ TPGRL+D Q + VE LV+DEADRM DMGFI D+R +L +LP Sbjct: 120 ALKAGADIVIGTPGRLIDYLKQKVYSVKDVEALVIDEADRMFDMGFIADLRFILRRLPPY 179 Query: 180 -KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 KRQNLLFSAT + + LA + ++ P ++ V +++V Q ++ V +K K LL Sbjct: 180 DKRQNLLFSATLNTRVMELAYEFMNMPEKVSVTPEQMTAERVEQVLYHVSRKEKFPLLLG 239 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ K ++ ++F TK A +L ++LN + I G+ Q R + LADFK G + + Sbjct: 240 LLRKMGMERTMIFVNTKREAEYLQDRLNANEFPGKVISGDVEQRKRMKILADFKDGTLPI 299 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 ++ATD+A+RG+ IE + HV+NY+LP EDYVHRIGRT RA A G A+S D + Sbjct: 300 MIATDVASRGIHIEGVSHVINYDLPQDCEDYVHRIGRTARAGAEGMAISFADEDGAFYIE 359 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAK 418 IE +K++I P + + + + + GG+ + R G+ G Sbjct: 360 PIEDFIKQKI-----PTEWAEDDMFVHDYKRTKPRPRTELPHGRGGKPGDRGRSGDKGRP 414 Query: 419 SASAKPAEKPSRRLGDAKPAGEQ 441 +PA + G KPAGE+ Sbjct: 415 GDKGRPAGRSRSASGSDKPAGEK 437 >UniRef50_B7QFN5 ATP-dependent RNA helicase, putative n=1 Tax=Ixodes scapularis RepID=B7QFN5_IXOSC Length = 519 Score = 566 bits (1459), Expect = e-160, Method: Composition-based stats. Identities = 145/425 (34%), Positives = 225/425 (52%), Gaps = 11/425 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++ D + + EP+PIQ QA P VL GRDL+ AQTG+GKT + LP Sbjct: 94 LTLDECNFPEPCRELFRSKNFTEPSPIQAQAWPVVLGGRDLVGIAQTGSGKTLAYVLPAA 153 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENV-RDYSKYLNIRSLVVFGGVSINPQM 119 H+ + + P+ ++L PTREL QI + ++ V+GGVS PQ+ Sbjct: 154 IHMSDQPQPERDEGPI-GVVLAPTRELVQQISQVAYEWCGGAFRLKGAPVYGGVSKGPQI 212 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 +L+GG + +ATPGRLLD+ A+ L + LVLDEADRMLDMGF IR+++ + Sbjct: 213 ARLQGGAHICIATPGRLLDILETGAINLLRCSYLVLDEADRMLDMGFEPQIRKIVDQTRP 272 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNT-ASDQVTQHVHFVDKKRKRELLSH 238 RQ +++SAT+ +++ LAE+ L + ++I V + A+ + Q VH K E L Sbjct: 273 DRQTVMWSATWPSEVRDLAEEFLTDHVQITVGSEDLCANHNIRQVVHVCQGFEKEEKLLE 332 Query: 239 MIGK---GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295 + + Q+ L+F TK + + L K+G R+ A HG+ SQ R AL F+SG Sbjct: 333 TLREINAEGDQRTLIFVATKARVVTIVQNLYKNGFRAVATHGDLSQNKRDIALDRFRSGK 392 Query: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK 355 +LVATD+AARGLD+ ++ +V+NY+ P+ E YVHRIGRTGR+ +G A++L D Sbjct: 393 TPILVATDVAARGLDVSDIKYVINYDYPDTSESYVHRIGRTGRSNRSGTAITLFTPDNAG 452 Query: 356 LLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQR-----GGGGRGQGGGRGQQQP 410 + + +L++ + E ++ N R++ + + G R Sbjct: 453 QAKQLVSVLQEAKQEVNPELLELVDRQVSQKFANRRRRPAQQSWDRRPQHRQGDRFGDYA 512 Query: 411 RRGEG 415 + G Sbjct: 513 QETRG 517 >UniRef50_Q0G0P8 Superfamily II DNA and RNA helicase n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G0P8_9RHIZ Length = 457 Score = 566 bits (1459), Expect = e-160, Method: Composition-based stats. Identities = 192/440 (43%), Positives = 266/440 (60%), Gaps = 5/440 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +FD GL+ + RA+A PTPIQ++AIP L GRD++ AQTGTGKTA F LPLL Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 HL+T R +ALIL+PTRELA QI E++ D S+ I VVFGGVS+ PQ+ Sbjct: 65 HLMTVGG-KPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQA 123 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GVD+LVATPGRLLDL Q A+ L + L+LDEADRMLDMGF+ D+ +++ K P R Sbjct: 124 LARGVDILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGKCPDDR 183 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q+++FSAT I+ L++K+L NP ++ V +++ Q V V ++ K+ L + Sbjct: 184 QSMMFSATMPKPIEDLSKKILTNPQKVSVTPAVVTVEKIAQSVFSVPQRAKKHWLIDFVS 243 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 K + +++VFTRTKHGAN L L+K GI++ AIHGNKSQ AR +AL F+ G+I VLVA Sbjct: 244 KNDTGRIVVFTRTKHGANRLTSDLDKAGIQALAIHGNKSQTARQKALGAFQDGEIDVLVA 303 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TDI ARG+ ++++ HVVN++LP PE YVHRIGRT RA +G+A++LV E L+ I Sbjct: 304 TDIVARGIHVDDISHVVNFDLPEEPESYVHRIGRTARAGRSGQAIALVDPSERAKLKQII 363 Query: 362 KLLKKEIPRI----AIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 KL ++ + + + R Q+ GR + G+ R G Sbjct: 364 KLTGIDLTPQATDYTVNVLAGELDADDGKRRGPRNQQPRNGRPRNRGKNGNGGRPNGGAK 423 Query: 418 KSASAKPAEKPSRRLGDAKP 437 + + S + KP Sbjct: 424 RQNAGGETANRSSQRPSGKP 443 >UniRef50_C7RHZ9 DEAD/DEAH box helicase domain protein n=3 Tax=Anaerococcus RepID=C7RHZ9_ANAPD Length = 536 Score = 566 bits (1459), Expect = e-160, Method: Composition-based stats. Identities = 143/377 (37%), Positives = 225/377 (59%), Gaps = 8/377 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+ L + +ILRA+ + GY +P+PIQ+++IP +LEG DL+ +QTG+GKTA F +P++ Sbjct: 1 MKFNELNIGNEILRAIDDLGYEKPSPIQEESIPHLLEGNDLIGKSQTGSGKTAAFAIPII 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 +++ + +ALIL PTREL Q+ + + KY I+ L V+GG I Q+ Sbjct: 61 ENI-------EANGITQALILCPTRELCIQVSKEIEKLYKYKKEIKILSVYGGSHIVRQI 113 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ GV+++V TPGRL+DL + +KLDQ++ +VLDEAD M DMGF D++ +L + Sbjct: 114 KSLKKGVEIVVGTPGRLMDLMRRKVLKLDQLKTVVLDEADEMFDMGFRDDMKFILDRTNP 173 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ FSAT +I+ ++ NP E+++ + D++ Q+ + + K E L + Sbjct: 174 NRQTCFFSATMGPEIQEFSKLYQTNPYEVKIKSKEVTVDRIDQYYIKLKESMKEEALMRL 233 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + +VF TK + L E L K +HG+ Q +R + + F++ I++L Sbjct: 234 LEIHKANLAIVFCNTKRKVDRLVESLTKKNYLVDGLHGDLKQSSRDQVMKKFRNKTIQIL 293 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARGLD++++ V NY+LP + E YVHRIGRT RA +G + SL+ ++ LR Sbjct: 294 VATDIAARGLDVDDVDIVFNYDLPQLDEYYVHRIGRTARAGKSGLSFSLISGRDNNRLRQ 353 Query: 360 IEKLLKKEIPRIAIPGY 376 IE K I ++ +P Sbjct: 354 IENYTKANIKQMPVPTL 370 >UniRef50_Q8SRB2 ATP-dependent RNA helicase DBP2 n=18 Tax=Fungi/Metazoa group RepID=DBP2_ENCCU Length = 495 Score = 565 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 148/409 (36%), Positives = 231/409 (56%), Gaps = 4/409 (0%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F+ G S +++ ++ E+G+ EPT IQ Q P L GRD++ AQTG+GKT F LP L H Sbjct: 89 FEEAGFSSEVVSSLVEKGFSEPTAIQGQGWPMALSGRDMVGIAQTGSGKTLSFILPALVH 148 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 +QP +G P+ L+L PTREL QI + V ++ N+RS V+GG S PQ+ L Sbjct: 149 AKDQQPLRRGDGPI-VLVLAPTRELVMQIKKVVDEFCGMFNLRSTAVYGGASSQPQIRAL 207 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 G +V++ATPGRL+DL Q L +V LVLDEADRMLDMGF +R+++ K A RQ Sbjct: 208 HEGAEVVIATPGRLIDLHDQGHAPLSRVTFLVLDEADRMLDMGFEPQLRKIIPKTNANRQ 267 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMIG 241 L++SAT+ +++ LAE ++ +++ V + ++ Q V + K + L ++ Sbjct: 268 TLMWSATWPREVRGLAESYMNEYIQVVVGNEELKTNSKIKQIVEVCSGREKEDKLIGVLD 327 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 +V+VF K + L LN+ G +AA+HG+KSQ R + L DF+SG +L+A Sbjct: 328 NFKGDKVIVFCNMKRTCDDLEYVLNRSGYGAAALHGDKSQNIRDKVLDDFRSGRRPILIA 387 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAA-ATGEALSLVCVDEHKLLRDI 360 T++A RGLD+ ++ V+N++ P EDYVHRIGRT R G + + V + R++ Sbjct: 388 TEVAGRGLDVNDVKLVINFDFPGSCEDYVHRIGRTARGNTKEGISHTFFTVGDKANAREL 447 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQ 409 ++L++ + E + + + + G RG+ G + Sbjct: 448 IRMLREANQTVP-SDLEDMVRVSNDRYGSRSTRHGYDYRGRAGRFPYRG 495 >UniRef50_Q2RQT0 DEAD/DEAH box helicase n=59 Tax=root RepID=Q2RQT0_RHORT Length = 799 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 180/448 (40%), Positives = 255/448 (56%), Gaps = 4/448 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F LGLSP+ LRA+ E GY PTPIQ QAIP V GRD++ AQTGTGKTA FTLP++ Sbjct: 1 MTFADLGLSPETLRAIEEVGYTTPTPIQVQAIPYVQMGRDVLGIAQTGTGKTASFTLPMI 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + + A R R+LIL PTRELA Q+ EN Y KY + ++ GG S+N Q Sbjct: 61 DILASGKAKA---RMPRSLILAPTRELATQVSENFTLYGKYQKLSMALLIGGESMNEQQK 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GVDVL+ATPGRL+DL + ++ L V++LV+DEADRMLDMGFI D+ R++ LP Sbjct: 118 VLDRGVDVLIATPGRLIDLFERGSILLRDVKVLVIDEADRMLDMGFIPDVERIVALLPKI 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ L FSAT +I+ LA+ L NP E+ + ++ V Q + V KRE L ++ Sbjct: 178 RQTLFFSATMDKEIRRLADAFLMNPKEVRIEPTQKVAETVEQALIMVKASEKREALRQLL 237 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +F K + L + L+ G A+HG+ Q RT L FK +++++V Sbjct: 238 RRETVTNAFIFCNRKRDVDVLYKSLSGHGFDILALHGDMPQYVRTERLEKFKRAEVQLMV 297 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 +D+AARG+D+ E+ HV N+++P PEDY+HRIGRTGRA G A +L ++ K LR I Sbjct: 298 CSDVAARGIDVTEVSHVFNFDVPTHPEDYIHRIGRTGRAGRLGRAYTLATPEDAKYLRAI 357 Query: 361 EKLLKKEIPRIA-IPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKS 419 E LL K IP + + A + ++ GG+G+ ++ R + Sbjct: 358 ENLLGKTIPPDPQLELSDVAVEDVALAVAEDDRRPKRGGKGRPERGARRSGRGSADAERP 417 Query: 420 ASAKPAEKPSRRLGDAKPAGEQQRRRRP 447 P + + +PA E+ +P Sbjct: 418 RPLAPERAANDQAPVERPAVEKTLAEQP 445 >UniRef50_Q0BSI7 ATP-dependent RNA helicase n=54 Tax=Alphaproteobacteria RepID=Q0BSI7_GRABC Length = 763 Score = 564 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 187/452 (41%), Positives = 252/452 (55%), Gaps = 3/452 (0%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LGLS + RA+ E GY PTPIQ QAIP VL GRD++ AQTGTGKTA FTLP++ Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDI 284 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 L R+ A R R+LIL PTRELA Q+ EN Y +YL + ++ GG S+N Q L Sbjct: 285 LSDRRARA---RMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMNDQRDVL 341 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 GVDVL+ATPGRL+DL + + L ILV+DEADRMLDMGFI D+ R+++ LP RQ Sbjct: 342 SKGVDVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLDMGFIPDVERIVSLLPHNRQ 401 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 L FSAT + +I+ LA+ L NP EI VA+ + + +T + V + KR+ L H++ + Sbjct: 402 TLFFSATMAPEIRRLADAFLQNPKEITVAKPASVATTITSGLALVGEMDKRKALRHLLRQ 461 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 Q L+F K + L + L K G + +HG+ +Q R L FK+G +++LV + Sbjct: 462 EKVQNALIFCNRKRDVDILTKSLVKHGFAAGPLHGDLAQSLRFSTLEKFKAGSLQLLVCS 521 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARG+DI L HV N+++P EDYVHRIGRTGRA G A +L D+ + IEK Sbjct: 522 DVAARGIDIGGLSHVFNFDVPIHAEDYVHRIGRTGRAGREGAAFTLASPDDKFAVDAIEK 581 Query: 363 LLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSASA 422 L+ IPRI I G E + GR+ + G G G + A Sbjct: 582 LINAPIPRIEIEGLERAEWSEEPNRGRGRRHKNGKGGKGNNRYGSRGQDNARKDRAFTEA 641 Query: 423 KPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 + Q P +P +Q Sbjct: 642 DAKSQADITPDPVAEVATTQPAPAPAQPTQSQ 673 >UniRef50_A3WBD4 DNA and RNA helicase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WBD4_9SPHN Length = 497 Score = 564 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 180/456 (39%), Positives = 254/456 (55%), Gaps = 14/456 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F LGLSP++L+AV + GY EPT IQ +AIPAVL +DL+ AQTGTGKTA F LP++ Sbjct: 36 MTFADLGLSPELLKAVEDAGYTEPTAIQAEAIPAVLMMKDLIGIAQTGTGKTASFVLPMI 95 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + A R+LIL PTRELAAQ+ EN Y +++ ++ GGV + Q+ Sbjct: 96 DVMAAGRRRAL---MPRSLILEPTRELAAQVAENFEKYGANHDLKMALLIGGVQMGDQLK 152 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GVDVL+ATPGRL+DL + + L+ E+LV+DEADRMLDMGFI DI + KLP Sbjct: 153 TLDEGVDVLIATPGRLMDLFERGKILLNGCELLVIDEADRMLDMGFIPDIEFICDKLPET 212 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT I+ LA+K L NP IE R T + +T V ++KR+ L ++ Sbjct: 213 RQTMLFSATMPAPIEKLAKKFLSNPKRIETTRAATTNKDITAFKVPVKARQKRDTLEWLL 272 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + ++F K L + L + G S IHG+ Q +R + L FKSGD+ +LV Sbjct: 273 ANDQVETAIIFANRKTTVRELNKHLQRQGFASGEIHGDMDQSSRLKELDRFKSGDVNILV 332 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 A+D+AARGLDI+ + HV N++ P P+DYVHRIGRTGRA A G A +LV ++ + + ++ Sbjct: 333 ASDVAARGLDIKGVSHVFNFDTPWHPDDYVHRIGRTGRAGAKGRAFTLVADEDAEAIANV 392 Query: 361 EKLLKKEIPR-----IAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQG------GGRGQQQ 409 EKL +I + + + + ++ G ++ Sbjct: 393 EKLTGAKIKVFGKEDVRVELADGSAKNTGSDDEAKDEKPAEKKSRSRSRKRDDEGDAPRK 452 Query: 410 PRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRR 445 PRR K A + D PAGE + Sbjct: 453 PRRESAEDKPARKSRPRRRDDESDDPVPAGEWNGPK 488 >UniRef50_A8REA9 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8REA9_9FIRM Length = 572 Score = 564 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 138/395 (34%), Positives = 237/395 (60%), Gaps = 10/395 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ L +S ILRAV+E GY + T IQ +AIP ++EG+D++ + TGTGKTA F +P ++ Sbjct: 3 TFNELHISEAILRAVSEMGYEQATEIQAKAIPYIMEGKDVLGRSNTGTGKTAAFGIPAIE 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 + + +A ALI+ PTREL Q+ +R +SKY ++ + ++GG I Q+ Sbjct: 63 MVQPQDKYAN------ALIICPTRELVTQVAMELRKFSKYKEGVKIVPIYGGQPIERQIQ 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ G ++V TPGR++D + +KL + +++LDEAD ML+MGF DI +L+ +P++ Sbjct: 117 LLKRGCGIVVGTPGRIMDHLRRRTLKLSDIRMVILDEADEMLNMGFKEDIEEILSLMPSE 176 Query: 181 R--QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 R Q +LFSAT+ +I +A++ ++P+ +E+ D V Q + V + +K L Sbjct: 177 RSYQTILFSATWPSEIMRIAKEFQNDPVTVEIKSAQRTIDTVEQLYYEVPRGKKANALRV 236 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + + ++F TK + L +LNK I++ A+HG+ Q R+R + F+SG + + Sbjct: 237 LLNHYDPELCMIFANTKKMVDELQGELNKHDIKACALHGDMKQEFRSRVMEQFRSGSMPI 296 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC-VDEHKLL 357 L+ATD+AARG+D++++ V+N+++P E Y+HRIGRTGRA G A++L+ + L Sbjct: 297 LIATDVAARGIDVDDVDLVINFDIPQDNEYYIHRIGRTGRAGKKGLAITLISGGRQRSEL 356 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQ 392 ++I + K I A+P + + G + Sbjct: 357 KNIMRYTKTNIKHHALPTSAQMQAHNRKAYIEGVK 391 >UniRef50_UPI00019259AA PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 n=2 Tax=Hydra magnipapillata RepID=UPI00019259AA Length = 790 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 148/447 (33%), Positives = 221/447 (49%), Gaps = 5/447 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF G ++ + Y +PTPIQ QA+P L GRD++ A+TG+GKTA F P+L Sbjct: 276 ISFGHFGFDDHLMGVIRSSNYSKPTPIQSQAVPVALSGRDIIGIARTGSGKTAAFVWPML 335 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H++ + +G P+ ALI PTREL QI + + K N+R + +GG S Q Sbjct: 336 VHIMAQPVLKEGDGPI-ALICAPTRELCQQINSECKRFGKCYNLRVIACYGGGSKWEQTK 394 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ G +++V TPGRL+DL A L +V LV DEADRM DMGF +R + + Sbjct: 395 GLQQGAEIVVCTPGRLIDLIKAKATNLLRVTYLVFDEADRMFDMGFEPQVRSIANNVRPD 454 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFV-DKKRKRE-LLSH 238 RQ LLFSAT ++ L +L +P+ I V A++ + Q V + ++K LLSH Sbjct: 455 RQCLLFSATMKKKVEWLCRDILSDPIRIVVGELGEANEDIVQAVEVMKSPQQKWNWLLSH 514 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + VL+F K + +A L + G IHG+ Q R L FK + Sbjct: 515 IVEFTSGGSVLIFVTKKSNSEEVAANLKEQGYELGLIHGDFDQFERNNVLKQFKQKQFLI 574 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLDI + V+NY++ + HRIGRTGRA G A +L+ + Sbjct: 575 LVATDVAARGLDIPSIKTVINYDVARDITTHTHRIGRTGRAGEKGIAYTLITPQDTHFAA 634 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAK 418 D+ + L+ R +P D ++K + R +RG + + G Sbjct: 635 DLVRNLEGANQR--VPDELLDLALKNPWFRKTRAKRGRKAANKEFTPRDRPGLGLPEGKG 692 Query: 419 SASAKPAEKPSRRLGDAKPAGEQQRRR 445 + + L G++ R Sbjct: 693 GGNDEGNLADEEELTVGNSGGKRPSRS 719 >UniRef50_UPI00016C5336 ATP-dependent RNA helicase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5336 Length = 523 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 154/442 (34%), Positives = 233/442 (52%), Gaps = 16/442 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F L L ++ A+ GY+ PTPIQ+ IP L G+D++ AQTGTGKTA F +P L Sbjct: 86 MLFADLKLMRPLMDAITAAGYKNPTPIQENVIPPALRGKDVIGQAQTGTGKTAAFLIPFL 145 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + +++TPTRELA QI + R + V+GG + Q+ Sbjct: 146 NRW-----RPHTLKGPIGVVMTPTRELALQIANEAEKLAPSKRFRCVPVYGGTGMQRQLD 200 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L G D++V TPGR+LD + ++ L QV VLDEADRMLD+GF DI R+L + P++ Sbjct: 201 GLTRGCDLVVGTPGRMLDHLQRGSMSLSQVRYAVLDEADRMLDIGFRDDIERILKRCPSE 260 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LL SAT D IK L + + +P+ + + D++ Q VD+ RK ELL ++ Sbjct: 261 RQTLLMSATVPDSIKRLVNRYMRDPVHLHMMPEKPTVDKIRQSYFTVDQDRKFELLKRVV 320 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +Q L+F K A++L L + ++A IHG+ Q R + +A F++ DI+ L+ Sbjct: 321 EREKPRQCLIFVERKRWADNLYRDLKRAVPKAAVIHGDLPQSQREKIMAAFRTADIKYLI 380 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+ +RG+D+ L HV+NY+LP E+YVHRIGRTGR G A+S V ++ + L +I Sbjct: 381 ATDVMSRGIDVSGLSHVINYDLPMDIENYVHRIGRTGRIGKDGIAISFVLPEQGEHLTNI 440 Query: 361 EKLLKKEIPRIAIPGYE-----------PDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQ 409 E ++ + I + G+E + + ++ G G Q Sbjct: 441 EMMINRLIEEDRVEGFEAAAPRASRPAAEVKVVFSGWEAAKEEKPATDDDGWGSDDAPPQ 500 Query: 410 PRRGEGGAKSASAKPAEKPSRR 431 G K + +K S+R Sbjct: 501 SGGGNDPKKPPFGRRGKKYSQR 522 >UniRef50_B4N414 GK13754 n=2 Tax=Bilateria RepID=B4N414_DROWI Length = 839 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 150/417 (35%), Positives = 223/417 (53%), Gaps = 5/417 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF G +++AV + Y +PT IQ QA+P L GRD++ A+TG+GKTA F PLL Sbjct: 302 SFGHFGFDDQLIKAVRKAEYTQPTSIQAQAVPCALAGRDIIGIAKTGSGKTAAFIWPLLM 361 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 HL+ ++ G P+ LIL PTREL+ QI + + K N+R + +GG S Q Sbjct: 362 HLMDQRELKAGEGPI-GLILAPTRELSLQIYNEAKRFGKVYNLRVVCCYGGGSKWEQSKA 420 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L G +++VATPGR++D+ A L +V LVLDEADRM MGF +R + + R Sbjct: 421 LEQGAEIIVATPGRMIDMVKMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICQHVRPDR 480 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVD-KKRKRE-LLSHM 239 Q LLFSATF I+ LA +L +P+ I N A+ VTQ V+ + ++K LL H+ Sbjct: 481 QTLLFSATFKRRIERLARDVLTDPIRIVQGELNEANQDVTQAVYVLPNPQQKWNWLLCHL 540 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + L+F K A +A QL +HG+ Q R + + FK + +L Sbjct: 541 VKFLAEGSCLIFVTKKADAETVAHQLLVKEFNCLLLHGDMDQADRNKVIMQFKRKECDIL 600 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 +ATD+AARGLDI + +VVNY++ + + HRIGRTGRA G A +LV + + Sbjct: 601 IATDVAARGLDIPHIRNVVNYDIARDIDTHTHRIGRTGRAGEKGNAHTLVTEKDKEFAGH 660 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 + + L+ +P + ++K+ ++ R ++G G + G RG G Sbjct: 661 LVRNLEGA--DQPVPSDLLELAMKSSWFRSSRFKQGKGKKVTPTHVGLGYRERGGGN 715 >UniRef50_B8A609 Novel protein similar to vertebrate DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 (DDX43) n=2 Tax=Eumetazoa RepID=B8A609_DANRE Length = 719 Score = 563 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 144/391 (36%), Positives = 222/391 (56%), Gaps = 4/391 (1%) Query: 2 SFDS-LGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +F+ P I+ + G+++PTPIQ QA P VL G DL+ AQTGTGKT + LP Sbjct: 278 TFEEAFAHYPGIMENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLAYLLPGF 337 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + R L+LTPTRELA QI YS Y +S+ ++GG N Q+ Sbjct: 338 IHMDGQPMPRDKRNGPGMLVLTPTRELALQIEAECNKYS-YKGFKSICIYGGGDRNAQIK 396 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 + GVD+++ATPGRL DL+ + L + LVLDEADRMLDMGF I +++ + Sbjct: 397 VVTSGVDIVIATPGRLNDLQMNELINLRSITYLVLDEADRMLDMGFEPQIMKIILDIRPD 456 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 RQ ++ SAT+ ++ LA+ L +P+ + V + A + V Q V FV + K++ + Sbjct: 457 RQTVMTSATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNTVQQTVLFVQEDEKKDYVFDF 516 Query: 240 IGKGNW-QQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 I + +VL+F K A+ L+ L GI ++HG++ Q R AL DFK G +R+ Sbjct: 517 IHRMEPLDKVLIFVGKKLKADDLSSDLCLQGIAVQSLHGDREQCDREEALQDFKDGRVRI 576 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+A+RGLD+ ++ HV NY+ P E+YVHR+GRTGRA +GE+++LV ++ ++ Sbjct: 577 LVATDLASRGLDVHDITHVFNYDFPRNVEEYVHRVGRTGRAGRSGESVTLVTREDWRVAA 636 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQN 389 ++ +L++ + + + Sbjct: 637 ELITILERSGQDVPEELVLMAERYEKHRREK 667 >UniRef50_Q553B1 ATP-dependent RNA helicase ddx46 n=1 Tax=Dictyostelium discoideum RepID=DDX46_DICDI Length = 1151 Score = 563 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 144/427 (33%), Positives = 237/427 (55%), Gaps = 5/427 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 S+ GL+ + + + Y +PT IQ Q IPA++ GRDL+ A+TG+GKT F LP+ + Sbjct: 510 SWAQAGLTEKVHLLLKKFQYEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFR 569 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ + A G + ALI++PTRELA QI + +SK L +R+ V+GG SI+ Q+ + Sbjct: 570 HILAQPKSAPGEGMI-ALIMSPTRELALQIHVECKKFSKVLGLRTACVYGGASISEQIAE 628 Query: 122 LRGGVDVLVATPGRLLDLE---HQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ G D++V TPGR++D+ ++ L +V LVLDEADRM DMGF I ++ + Sbjct: 629 LKRGADIVVCTPGRMIDILCANNRRITNLRRVTFLVLDEADRMFDMGFGPQINCIVDSIR 688 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ ++FSATF ++ +A+K+L+ PLEI R+ S + Q V + + L Sbjct: 689 PDRQTIMFSATFPPKVENVAKKILNKPLEIIAGGRSIVSSDIEQFVEVRPTETRFRRLIE 748 Query: 239 MIGK-GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++ + Q+L+FT + ++L QL+ + ++HG+K Q R ++DFK+ Sbjct: 749 LLSIWYHKGQILIFTNRQETTDNLYRQLSNSQYQCLSLHGSKDQTDRDETISDFKNKVKT 808 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +L+AT +A+RGLDI++L VVN++ P+ EDYVHR+GRTGRA G A + + DE + Sbjct: 809 ILIATPLASRGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGRAGNRGTAYTFITPDEERFS 868 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 I K L++ ++ + + + + + + G G + + Sbjct: 869 SSIIKALEQSGSKVPDELRKLNDTYEKKRKEGKDVLLAPTGFTGRGHKFDAAEEDKKNIE 928 Query: 418 KSASAKP 424 + K Sbjct: 929 RKQQRKA 935 >UniRef50_Q5ZT20 ATP-dependent RNA helicase n=4 Tax=Legionella pneumophila RepID=Q5ZT20_LEGPH Length = 589 Score = 563 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 165/459 (35%), Positives = 244/459 (53%), Gaps = 13/459 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F + S + +A+ + + P+PIQ Q IP +L+GRD +A AQTGTGKTA F LP+LQ Sbjct: 7 NFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPILQ 66 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKY-LNIRSLVVFGGVSINPQMM 120 +L + +ALIL PTRELA Q+ E SKY N+ V+ GG Q+ Sbjct: 67 NL------SPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLK 120 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +LR G V+V TPGR+LD + + L+ ++ +LDEAD ML MGFI D+ +L KLP K Sbjct: 121 QLRSGAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEK 180 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 +Q LFSAT I+ +A L++P IE+ + Q F +K + L ++ Sbjct: 181 KQMALFSATMPYRIRQIANTYLNDPASIEIRMETATVKSIEQRFLFASVHQKPDALIRVL 240 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++Q V+VF RTK +AE L + G+R+ AIHG+ +Q R R +A FK G I +LV Sbjct: 241 EVEDYQGVIVFVRTKSSTEEVAELLQQHGLRAMAIHGDITQSLRERIIAQFKQGAIDILV 300 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD+E + HV+NY++P+ E YVHRIGRTGRA +G + V E +L+ I Sbjct: 301 ATDVAARGLDVERVTHVINYDMPHDNETYVHRIGRTGRAGRSGVTILFVTPKESRLISSI 360 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG----- 415 E+ ++ I ++ +P + + + R R ++ + Sbjct: 361 ERHTRQRIEKVQVPNDHMIQMARQQRFMSNITTRLNHEHVYSYKRIVEEYIKEHDVSAVD 420 Query: 416 -GAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAA 453 A A + P R+ + A + R R Sbjct: 421 VAAALALLLHKDMPWRKELNMPKAASAFKEERARAGEKG 459 >UniRef50_A6TTG0 DEAD/DEAH box helicase domain protein n=28 Tax=Firmicutes RepID=A6TTG0_ALKMQ Length = 549 Score = 563 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 161/458 (35%), Positives = 250/458 (54%), Gaps = 18/458 (3%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LG+S +I + + EPTP+Q QAIP +L RD+MA AQTGTGKT F LP+L+ Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + +P ++ALI+TPTRELA QI + ++ I L +GG + Q+ KL Sbjct: 65 VNVEKP------TIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKL 118 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 +G + +++ TPGRLLD + + L ++ +LVLDEAD+ML MGF+ D+ ++T +P +RQ Sbjct: 119 KGSIHIIIGTPGRLLDHLRRKTINLGKLSMLVLDEADQMLHMGFLRDVEDIMTHIPKRRQ 178 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 N+ FSAT + ++ LAE+ + +P++I+V + D++ Q V + K++LL + + Sbjct: 179 NMFFSATMPNQVRTLAEQYMKDPVQIQVQSKRVTLDEIRQVVIETTDRGKQDLLCQLFDE 238 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 N ++F RTK A L E L G S +HG+ +Q R + + FK I+ LVAT Sbjct: 239 YNPFMAIIFCRTKRRAIALNEALINLGYNSDELHGDLTQAKREKVMKAFKKSKIQYLVAT 298 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARGLDIE + H+ NY++P E Y+HRIGRTGRA TG A++ + + L+ IEK Sbjct: 299 DVAARGLDIEGVTHIFNYDIPQDGESYIHRIGRTGRAGETGMAITFMTSRDRDELKIIEK 358 Query: 363 LLK-----KEIPRIAIPGYEPDPSIKAEPIQNGRQQRG------GGGRGQGGGRGQQQPR 411 ++K ++ I E + K P G + G + G + +P Sbjct: 359 VIKMDLDVQKSKSGKIDLDEEEQDTKKSPKGRGNDKSKDFKKGKYGDKKGKPGDKKGRPG 418 Query: 412 RGEGGAKSASAKPAEKPSRRL-GDAKPAGEQQRRRRPR 448 +P +K R +P ++ R + Sbjct: 419 DKRDRPTDKKGRPGDKRDRPSDNKGRPGDKRDRPSDNK 456 >UniRef50_Q5NZY2 ATP-dependent RNA helicase DeaD n=12 Tax=Bacteria RepID=Q5NZY2_AZOSE Length = 658 Score = 563 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 152/391 (38%), Positives = 222/391 (56%), Gaps = 8/391 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF L L +L A++E GY P+PIQ IP +L G DL+ AQTGTGKTA F LPLL Sbjct: 45 SFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLLD 104 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 L + + L+L PTRELA Q+ E + Y+K L L V+GG S+ Q+ Sbjct: 105 RLDL------AVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLR 158 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L G V+V TPGR++D + ++ LD + LVLDEAD ML MGFI D+ +L PA+ Sbjct: 159 QLARGAHVIVGTPGRVMDHIERKSLNLDSLTTLVLDEADEMLRMGFIDDVEWILQHTPAE 218 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LFSAT D I+ +A + L P E+++ T Q + K + L+ ++ Sbjct: 219 RQTALFSATMPDAIRRVAHRYLREPREVKIKASTTTVSTTRQRYCQISVAHKLDALTRIL 278 Query: 241 G-KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++ ++F RTK LA++L G +AA++G+ +Q R R + K G + ++ Sbjct: 279 EVEEDFDAAIIFVRTKTATVELADKLEARGYSAAALNGDMTQQLRERVIEQLKGGQLDIV 338 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD+ + HV+NY++P E YVHRIGRTGRA TG A+ V E ++L+ Sbjct: 339 VATDVAARGLDVSRISHVINYDIPYDTEAYVHRIGRTGRAGRTGSAILFVAPREMRMLKV 398 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 IE+ ++ I + +P E + + Sbjct: 399 IERATRQPIEALQLPSREAVADKRVAAFRQQ 429 >UniRef50_Q8H0U8 DEAD-box ATP-dependent RNA helicase 42 n=11 Tax=Viridiplantae RepID=RH42_ARATH Length = 1166 Score = 563 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 155/438 (35%), Positives = 244/438 (55%), Gaps = 8/438 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 + GL+ IL + + Y +P PIQ QA+P ++ GRD + A+TG+GKT GF LP+L+H Sbjct: 531 WHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH 590 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + + P G P+ L++ PTREL QI ++R +SK L IR + V+GG + Q+ +L Sbjct: 591 IKDQPPVEAGDGPI-GLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISEL 649 Query: 123 RGGVDVLVATPGRLLDLE---HQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 + G +++V TPGR++D+ L +V LV+DEADRM DMGF I R++ + Sbjct: 650 KRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRP 709 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ +LFSATF ++ LA K+L+ P+EI+V R+ + +TQ V + + L + Sbjct: 710 ERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLEL 769 Query: 240 IGK-GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 +G+ ++LVF +++ + L + K ++HG K Q R ++DFK+ + Sbjct: 770 LGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNL 829 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 L+AT +AARGLD++EL VVN++ PN EDYVHR+GRTGRA G A++ + D+ K Sbjct: 830 LIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAP 889 Query: 359 DIEKLLKKEIPRIAIP-GYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 D+ K L E+ +P + ++ G +Q G G G G + ++ A Sbjct: 890 DLVKAL--ELSEQPVPDDLKALADGFMVKVKQGIEQAHGTGYGGSGFKFNEEEEEVRKAA 947 Query: 418 KSASAKPAEKPSRRLGDA 435 K A AK + Sbjct: 948 KKAQAKEYGFEEDKSDSE 965 >UniRef50_Q9VHP0 ATP-dependent RNA helicase bel n=13 Tax=Eukaryota RepID=DDX3_DROME Length = 798 Score = 562 bits (1451), Expect = e-159, Method: Composition-based stats. Identities = 158/403 (39%), Positives = 231/403 (57%), Gaps = 22/403 (5%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SFD + L+ I VA Y +PTP+Q+ AIP ++ GRDLMA AQTG+GKTA F +P+L Sbjct: 296 SFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILN 355 Query: 62 HL---------ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGG 112 + + + +++ ++ L+L PTRELA QI E + ++ +R V++GG Sbjct: 356 QMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGG 415 Query: 113 VSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRR 172 + + QM +L G ++VATPGRL D+ + V L+ + LVLDEADRMLDMGF IRR Sbjct: 416 NNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRR 475 Query: 173 VLTK--LPA--KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVD 228 ++ + +P +RQ L+FSATF I+ LA L N + + V R + S+ +TQ + +V Sbjct: 476 IVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQTILWVY 535 Query: 229 KKRKRELLSHMI-------GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281 + KR L ++ L+F TK GA+ L E L + +IHG+++Q Sbjct: 536 EPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQ 595 Query: 282 GARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAA 341 R AL F+SGD +LVAT +AARGLDI + HV+N++LP+ E+YVHRIGRTGR Sbjct: 596 KEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 655 Query: 342 TGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKA 384 G A S + D+ +LL + + IP + D S Sbjct: 656 LGVATSFFNEKNRNICSDLLELLIET--KQEIPSFMEDMSSDR 696 >UniRef50_C7HXF4 DEAD/DEAH box helicase domain protein n=3 Tax=Bacteria RepID=C7HXF4_THIIN Length = 666 Score = 562 bits (1451), Expect = e-159, Method: Composition-based stats. Identities = 157/389 (40%), Positives = 225/389 (57%), Gaps = 7/389 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LGL +L+A+ + GY P+PIQ IP +L GRD++ AQTGTGKTA F LP+L Sbjct: 9 FAELGLPEPLLQALRDVGYETPSPIQAATIPPLLAGRDVLGQAQTGTGKTAAFALPILAK 68 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMK 121 + R +AL+L PTRELA Q+ E Y+ +L L ++GG S PQ+ Sbjct: 69 IDCNA------RHTQALVLAPTRELAIQVAEAFARYATHLPGFNVLPIYGGQSYVPQLAS 122 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G V+V TPGR++D + +KLDQ+ +VLDEAD ML MGFI D+ +L K P +R Sbjct: 123 LKRGAHVVVGTPGRIIDHLERGTLKLDQLAHMVLDEADEMLRMGFIDDVESILKKTPPQR 182 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT I+ +A+ L +P EI + T + + Q V K + L+ ++ Sbjct: 183 QVALFSATMPSAIRRIAQTYLRDPQEITIKAATTTATHIQQRYWMVSGLHKLDALTRILE 242 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 ++ +++F RTK LAE+L G +AA++G+ Q R R + K G + +LVA Sbjct: 243 VEPFEGMIIFARTKQATEELAEKLAARGFTAAALNGDVPQALRERMVQRLKDGQLDILVA 302 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + HVVNY++P E YVHRIGRTGRA +G+A+ V E LLR IE Sbjct: 303 TDVAARGLDVERISHVVNYDIPTDTESYVHRIGRTGRAGRSGDAILFVTPRERHLLRAIE 362 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 + ++ I ++ +P E + Sbjct: 363 RATRQPITQMQLPSTEAVNDSRISRFMER 391 >UniRef50_Q485D3 ATP-dependent RNA helicase, DEAD box family n=24 Tax=Gammaproteobacteria RepID=Q485D3_COLP3 Length = 455 Score = 562 bits (1450), Expect = e-159, Method: Composition-based stats. Identities = 216/450 (48%), Positives = 296/450 (65%), Gaps = 17/450 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MS DS+GLS D+L+AV GY+ TPIQQ+AIP + +G DL+ASAQTGTGKTA F+LP+L Sbjct: 1 MSVDSIGLSADLLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPIL 60 Query: 61 QHL----------------ITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNI 104 + + + + + +RALILTPTRELA Q+ +N++ +S+YL I Sbjct: 61 DAIAKANHAAKSSTTSTDENSAEEKSASGQAIRALILTPTRELANQVADNIKQFSQYLPI 120 Query: 105 RSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDM 164 +S VV+GG + Q L+ G+DVLVATPGRLL+ V L QV+ LVLDEADRMLDM Sbjct: 121 KSGVVYGGGKMASQTKMLKQGLDVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRMLDM 180 Query: 165 GFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHV 224 GF+ DI ++L + K Q L+FSATFSD +K+LA +LL +P I V++ NT S ++ Q V Sbjct: 181 GFLTDIEKLLLAVKHKHQTLMFSATFSDRVKSLANQLLKSPKTISVSKENTTSGKIKQAV 240 Query: 225 HFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGAR 284 ++V ++RKRELLS +IG NWQQVLVF TK AN LA++L DGI++A HG+K+QGAR Sbjct: 241 YWVTEERKRELLSELIGVNNWQQVLVFAGTKESANTLAKELKLDGIKAALCHGDKTQGAR 300 Query: 285 TRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGE 344 +AL F G +RVLVATD+AARGLDI +L VVN+ LP +PEDYVHR+GRTGRA +G Sbjct: 301 NKALEQFSEGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVGRTGRAGKSGT 360 Query: 345 ALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGG 404 A+SLV + + L +IE+L++++ RI PGYE ++A Q +R R + Sbjct: 361 AISLVSPKDERFLENIEQLIERKFERIVAPGYE-FNRLEASEYQEATVKRDSKNRYRAAQ 419 Query: 405 RGQQQPRRGEGGAKSASAKPAEKPSRRLGD 434 Q + + KS S + + + + Sbjct: 420 EKNQNLAKKDVKIKSLSKNKTARTNSKYNN 449 >UniRef50_Q31AC4 DEAD/DEAH box helicase-like protein n=9 Tax=Prochlorococcus marinus RepID=Q31AC4_PROM9 Length = 593 Score = 562 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 151/405 (37%), Positives = 229/405 (56%), Gaps = 7/405 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F G + IL +++ +GY+ PTPIQ+ AIP ++ GRDL+ AQTGTGKTA F LPL++ Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSK-YLNIRSLVVFGGVSINPQMMK 121 L + + L++TPTRELA Q+ E+ + YS N +++ ++GG Q+ Sbjct: 113 LADNKELNA-----KVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYA 167 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ VDV+V TPGR++D Q K++ + LVLDEAD ML+MGF+ DI ++ +LP + Sbjct: 168 LKRKVDVVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLEDIEWIIDQLPKNK 227 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q +LFSAT ++I+ +A+K L++P EI + + ++Q +V + K + L ++ Sbjct: 228 QMVLFSATMPNEIRNIAKKYLNDPAEILIKSVKKETQLISQKFLYVQRHHKLDALKRILE 287 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 N V++F RTK +AE L G A ++G+ Q R + K G I +LVA Sbjct: 288 LNNEG-VIIFVRTKLLTTSIAEALENLGHSVAVLNGDIPQNQRENTVDRLKKGFIDILVA 346 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + VVNY+ P E Y HRIGRTGRA +GEA+ V E LR++E Sbjct: 347 TDVAARGLDVERIKLVVNYDFPFDKETYTHRIGRTGRAGRSGEAILFVNHREKHFLRNLE 406 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRG 406 + +I I IP + + E + + + Sbjct: 407 NSTRTKIEEINIPSNKIINEKRMEKLIENVNESSLAKEDNEENKA 451 >UniRef50_C4R557 RNA helicase in the DEAD-box family, necessary for prespliceosome formation n=1 Tax=Pichia pastoris GS115 RepID=C4R557_PICPG Length = 784 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 157/449 (34%), Positives = 249/449 (55%), Gaps = 9/449 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 + L L + + + Y PTPIQ +A+P ++ G+DL+ A+TG+GKT F LP+ + Sbjct: 217 WCQLALPQQFMSVIEDLKYEAPTPIQSEALPNLMSGKDLIGIAKTGSGKTLAFLLPMFRQ 276 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 +I++ G P+ +ILTPTRELA QI + + + K LN++ + V+GG SI+ Q+ + Sbjct: 277 IISQPDPESGEGPI-GVILTPTRELALQIFKECKPFMKSLNLKGICVYGGASISQQISDI 335 Query: 123 RGGVDVLVATPGRLLDLE---HQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 + V V TPGRL+DL L + LVLDEADRM DMGF + +++ Sbjct: 336 KKRVHFAVCTPGRLIDLLTANSGRVTNLSRTSYLVLDEADRMFDMGFEPQVMKIIPNTRP 395 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 RQ L+FSATF ++ALA+K+L+NPLE+ V ++ +D +TQ V +D + + L + Sbjct: 396 DRQTLVFSATFPPKMEALAKKVLNNPLEVIVGEKSVVADTITQKVFVIDPQERFSKLLEL 455 Query: 240 IG----KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295 +G K +VLVF + A+ L L K G + ++HG K Q R + DFK+G+ Sbjct: 456 LGTFKSKDPTGKVLVFVERQDSADVLLTNLLKRGYNAQSLHGGKEQMDRDFIIQDFKTGN 515 Query: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK 355 +LVAT +AARGLD++ L V+NY+ PN EDYVHR+GRTGRA +TGEA++ + +++ Sbjct: 516 SDILVATSVAARGLDVKRLNLVINYDSPNHMEDYVHRVGRTGRAGSTGEAVTFLTAKDYR 575 Query: 356 LLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG 415 D+ + LK ++ + ++ E ++ G +RG G G+G + Q++ Sbjct: 576 AAYDVSRALKVS-KQLVPDNVQAVANVFIEQLKTGSAKRGSGYGGKGLEKLQEERELKRQ 634 Query: 416 GAKSASAKPAEKPSRRLGDAKPAGEQQRR 444 K+ + + A Sbjct: 635 LEKTTYGDEVATADPKKENTHGATATPPP 663 >UniRef50_C5PZD1 ATP-dependent RNA helicase n=5 Tax=Bacillales RepID=C5PZD1_STAAU Length = 517 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 153/466 (32%), Positives = 252/466 (54%), Gaps = 24/466 (5%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LG+S + ++++ G++EPTPIQ+ +IP L+G D++ AQTGTGKT F +PL++ Sbjct: 14 NFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIE 73 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 ++ G++ V++LIL PTRELA Q+ E +R++S+ ++ + VFGG+ I Q+ Sbjct: 74 KVV-------GKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKA 126 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA-K 180 L+ G ++V TPGR++D ++ +K D + L+LDEAD M++MGFI D+R ++ K+PA + Sbjct: 127 LKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQ 186 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT I+AL ++ + +P I+ + Q+ + V + K + ++ + Sbjct: 187 RQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFL 246 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +VF RTK + L L G ++ +HG+ +Q R L FK+ I +LV Sbjct: 247 DVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILV 306 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI + HV N+++P E Y HRIGRTGRA G A++ V E +R I Sbjct: 307 ATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQI 366 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRG------- 413 E +++ + P + + + I+ + R + Sbjct: 367 EDANGRKMSALRPPHRKEVLQAREDDIKEKVENWMSKKSESRLKRISTELLNEYNDVDLV 426 Query: 414 --------EGGAKSASAKPAEKP-SRRLGDAKPAGEQQRRRRPRKP 450 E + EKP SR+ + KP+G + R + P Sbjct: 427 AALLQELVEANDEVEVQLTFEKPLSRKGRNGKPSGSRNRNSKRGNP 472 >UniRef50_B4MZE1 GK18312 n=1 Tax=Drosophila willistoni RepID=B4MZE1_DROWI Length = 1424 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 143/374 (38%), Positives = 223/374 (59%), Gaps = 5/374 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ L ++ + + Y PTPIQ+ +IP + GRDLMA AQTG+GKTA F LP+L Sbjct: 1014 TFEEAKLRDILMDNIKKSAYTVPTPIQKVSIPVISAGRDLMACAQTGSGKTAAFLLPILN 1073 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ + + +A+I++PTRELA QI R ++ ++ +V+GG S+ Q Sbjct: 1074 HILDKGYELEI-GKPQAIIMSPTRELAVQIFNEARKFAHNSYLKITIVYGGTSVKYQNES 1132 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTK--LPA 179 + G +L+ATPGRLLD + + + +VLDEADRMLDMGF +R+++T + Sbjct: 1133 ITKGCHILIATPGRLLDFVERTFITFEDTRFVVLDEADRMLDMGFSESMRKIITHPTMRK 1192 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 + Q L+FSATF ++I+ +A + L + + + + A VTQ ++ VDK KR L + Sbjct: 1193 EHQTLMFSATFPEEIQRMAGEFLRDYVFVTIGVIGGACSDVTQTIYEVDKFNKRAKLMEI 1252 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + G +VF TK GA+ LA ++ + +IHG++ Q R +AL +FKSG ++VL Sbjct: 1253 LRDGADG-TIVFVETKRGADFLASFFSETEFPTTSIHGDRLQSQREQALREFKSGKMKVL 1311 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLV-CVDEHKLLR 358 +AT +A+RGLDI+ + HV+NY++P+ +DYVHRIGRTGR G A S + L Sbjct: 1312 IATSVASRGLDIKNVSHVINYDMPSTIDDYVHRIGRTGRVGNNGRATSFFDSDKDRALAG 1371 Query: 359 DIEKLLKKEIPRIA 372 D+ K+L+ + Sbjct: 1372 DLVKILEGSGQEVP 1385 >UniRef50_A5G1U8 DEAD/DEAH box helicase domain protein n=7 Tax=Alphaproteobacteria RepID=A5G1U8_ACICJ Length = 525 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 200/446 (44%), Positives = 268/446 (60%), Gaps = 7/446 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +LGL+ +LRA++EQ Y PTPIQ ++IP +LEG DL+ AQTGTGKTA F LP+L Sbjct: 59 FTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAAFVLPILHR 118 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + + R RAL+L PTRELA QI + R Y K+ VV GG PQ ++ Sbjct: 119 IAANRA-RPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKPGPQARRM 177 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 GVD+LVATPGRLLD ++LD VE +VLDEAD+MLD+GFI IR+++ KLP +RQ Sbjct: 178 ESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMAKLPRQRQ 237 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 ++FSAT I+ALA + L +P E+ V+ + D++ Q V + + K++ L+ ++ Sbjct: 238 AVMFSATMPKPIRALAGEFLRDPREVAVSVESKPVDRIDQQVLLLAPEEKKDKLAWLLAD 297 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 ++ +VFTRTKHGA+ + L GI +AAIHGNKSQG R RAL F+SG IRVLVAT Sbjct: 298 VAVERAIVFTRTKHGADKVTRHLEDAGIGAAAIHGNKSQGQRERALDQFRSGRIRVLVAT 357 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 DIAARG+D++ + HVVN+ELPNVPE YVHRIGRT RA A G A+SLV E LRDIE Sbjct: 358 DIAARGIDVDNVSHVVNFELPNVPESYVHRIGRTARAGAEGVAISLVEPSELPYLRDIET 417 Query: 363 LLKKEIPR---IAIPGYEPDPSIKAE---PIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 L+ + + + G P ++A Q +R G + G G G Sbjct: 418 LIGRHLVPGGAQPVRGLAPPHLLRARNQVARQGQMPKRNGPPKAAHAGHGHGGGHGGGHH 477 Query: 417 AKSASAKPAEKPSRRLGDAKPAGEQQ 442 + + AK G+ Q Sbjct: 478 GQGHGHGGGNAHHGKPAHAKAGGKPQ 503 >UniRef50_P42305 ATP-dependent RNA helicase dbpA n=99 Tax=Firmicutes RepID=DBPA_BACSU Length = 479 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 160/421 (38%), Positives = 227/421 (53%), Gaps = 7/421 (1%) Query: 1 MS-FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPL 59 MS F + +S DILRA+ GY EPT +QQ IPA LE +DL+ +QTG+GKTA F +PL Sbjct: 1 MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPL 60 Query: 60 LQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 + +ALILTPTRELA Q+ E++ + ++ I++ VFG S + Q Sbjct: 61 CELANWD------ENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQK 114 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 +L+ ++V TPGR+LD + + LD++ LV+DEAD ML+MGFI + ++ LP Sbjct: 115 AELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPT 174 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +R +LFSAT DI+ L+ + + NP IEV + + V V ++ K LL + Sbjct: 175 ERTTMLFSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAVIQVREENKFSLLKDV 234 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + N ++F RTK N L ++L+ G IHG Q R + +FK G+ R L Sbjct: 235 LMTENPDSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYL 294 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+DIE + V+NY+LP E YVHR GRTGRA G+A+S V E + L D Sbjct: 295 VATDVAARGIDIENISLVINYDLPLEKESYVHRTGRTGRAGNKGKAISFVTAFEKRFLAD 354 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKS 419 IE+ + EI +I P E K E + + GG K Sbjct: 355 IEEYIGFEIQKIEAPSQEEVARKKPEFLAKLNDRPESKKDKSEELNKDIMKLYFNGGKKK 414 Query: 420 A 420 Sbjct: 415 K 415 >UniRef50_Q12QV2 DEAD/DEAH box helicase-like protein n=27 Tax=Gammaproteobacteria RepID=Q12QV2_SHEDO Length = 433 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 221/429 (51%), Positives = 290/429 (67%), Gaps = 7/429 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+S +P+ILRA+AE GY+ TP+QQQAIPA+ G D++ASAQTGTGKTA F LP+L Sbjct: 1 MKFESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q + +P RALILTPTRELAAQ+ +N+ YSK++NI L ++GG+ + Q Sbjct: 61 QKM-HERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQ 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL+ G D++VATPGRLL+ + L VE LVLDEADRMLDMGF DI+++L + K Sbjct: 120 KLKQGADIIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLDMGFSTDIQKILQAVNKK 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSATFS +K LA +L P I ++NT + V+Q V+ V+++RKRELLS +I Sbjct: 180 RQNLLFSATFSTAVKKLANDMLDKPKIISADKQNTTAATVSQVVYPVEQRRKRELLSELI 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 G NWQQVLVFT T+ A+ L +LN DGI SA +HG K+QG+R RAL +F G +RVLV Sbjct: 240 GTKNWQQVLVFTATRADADKLVTELNLDGIPSAVVHGEKAQGSRRRALREFIEGKVRVLV 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 AT++AARGLDI+ L +VVNY+LP + EDYVHRIGRTGRA TG A+S V +E + L DI Sbjct: 300 ATEVAARGLDIQGLEYVVNYDLPFLAEDYVHRIGRTGRAGKTGVAISFVSREEERTLADI 359 Query: 361 EKLLKKEIPRIAIPGYEPDPS------IKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE 414 EKL+ ++I RI +PGYE I+ +Q+R Q G Q RR + Sbjct: 360 EKLIGQKIRRITVPGYEVSSRELLLKTIEKRRSFGKKQERNDNVGAQVVGEKNMQGRRVK 419 Query: 415 GGAKSASAK 423 G +++ K Sbjct: 420 VGKPTSTVK 428 >UniRef50_B9SW84 Dead box ATP-dependent RNA helicase, putative n=3 Tax=Magnoliophyta RepID=B9SW84_RICCO Length = 1173 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 151/438 (34%), Positives = 242/438 (55%), Gaps = 6/438 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 ++ GL+ IL + + Y +P PIQ QA+P ++ GRD + A+TG+GKT F LP+L+ Sbjct: 528 TWHQTGLASKILETIKKLNYEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLR 587 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + G P+ LI+ PTREL QI +++ ++K L IR + V+GG + Q+ + Sbjct: 588 HIKDQPLVEAGDGPI-GLIMAPTRELVQQIHSDIKKFAKVLGIRCVPVYGGSGVAQQISE 646 Query: 122 LRGGVDVLVATPGRLLDLE---HQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ G +++V TPGR++D+ L +V LV+DEADRM DMGF I R++ + Sbjct: 647 LKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIR 706 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ +LFSATF ++ LA K+L+ P+EI+V R+ + +TQ V + + L Sbjct: 707 PDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESERFLRLLE 766 Query: 239 MIGK-GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++G+ ++L+F +++ + L L K G ++HG K Q R ++DFKS Sbjct: 767 LLGEWNEKGKILIFVQSQDKCDALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCN 826 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +L+AT IAARGLD++EL VVN+++PN EDYVHR+GRTGRA G A++ + ++ + Sbjct: 827 LLIATSIAARGLDVKELDLVVNFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYA 886 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGA 417 D+ K L+ ++ + + G +Q G G G G + ++ A Sbjct: 887 PDLVKALELS-EQVVPEDLKALADGFMVKVNQGLEQAHGTGYGGSGFKFNEEEDEKRIAA 945 Query: 418 KSASAKPAEKPSRRLGDA 435 K A AK + Sbjct: 946 KKAQAKEYGFEEDKSDSE 963 >UniRef50_B2UL73 DEAD/DEAH box helicase domain protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UL73_AKKM8 Length = 423 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 189/422 (44%), Positives = 269/422 (63%), Gaps = 7/422 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS ILR + Y+ PTPIQ IP +L+ +DLM AQTGTGKTA F LPL+Q Sbjct: 5 TFRELGLSAPILRQLENLEYKTPTPIQAACIPLLLQNKDLMGLAQTGTGKTAAFALPLIQ 64 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L R GRR VRALIL+PTRELAAQI EN+R Y++ L++ + V+FGGV Q + Sbjct: 65 QLSERSGKPPGRR-VRALILSPTRELAAQIHENIRAYARGLHLSTAVIFGGVGYASQFKE 123 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GG+D+LVATPGRL+D + V LD VE L+LDEAD MLDMGF ++++++K+P KR Sbjct: 124 LAGGLDILVATPGRLIDHLERRTVSLDGVETLILDEADHMLDMGFAPALKKIVSKIPRKR 183 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFV-DKKRKRELLSHMI 240 +FSAT D+I+ LA+ LL P + V+ ++ +D+V Q + V + KR L ++ Sbjct: 184 HTQMFSATMPDNIRQLAQTLLQKPETVRVSPPSSTADRVEQFLCMVGSQSEKRLLTLELL 243 Query: 241 GKGN-WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + L+FTRT+HGA+ LA L+ ++AIHG+KSQG R R L +F+SG VL Sbjct: 244 KQQELPGRTLIFTRTRHGADRLASFLSGKDYPASAIHGDKSQGRRERMLREFRSGKTPVL 303 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARG+D++++ V+NY+LP PE YVHRIGRT RA A G+A++L +E + R+ Sbjct: 304 VATDIAARGIDVKDVRLVINYDLPEEPEVYVHRIGRTARAGAAGQAIALCSPEEIRKARN 363 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKS 419 + KLL + +P + + R++R + + +++PR+G G S Sbjct: 364 VHKLLGRLLPVH---ASSASVPAELRAVPEARRKRSSPMQEKRSA-PRREPRKGYGRNGS 419 Query: 420 AS 421 + Sbjct: 420 RA 421 >UniRef50_B9ETM9 Putative uncharacterized protein n=2 Tax=Oryza sativa RepID=B9ETM9_ORYSJ Length = 468 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 139/402 (34%), Positives = 222/402 (55%), Gaps = 30/402 (7%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +G +L+ + + G+ EPTPIQ Q P L GRDL+ A+TG+GKT + LP + H Sbjct: 93 FRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVH 152 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + + A G P+ L+L PTRELA QI + + Sbjct: 153 VNAQPILAPGDGPI-VLVLAPTRELAVQIQQEATKF------------------------ 187 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 GV++++ATPGRL+D+ + L +V LVLDEADRMLDMGF I+++++++ RQ Sbjct: 188 --GVEIVIATPGRLIDMIESHHTNLRRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQ 245 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHMIG 241 L +SAT+ +++ LA L +P ++ + A+ ++QHV + + +K L +++ Sbjct: 246 TLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLE 305 Query: 242 K-GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + ++L+F TK G + + QL DG + +IHG+KSQ R L++FKSG ++ Sbjct: 306 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMT 365 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD++++ +V+NY+ P EDYVHRIGRTGRA A G A + + +D+ Sbjct: 366 ATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDL 425 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQG 402 +L++ +++ P P R + G G G+ Sbjct: 426 INILEEAGQKVS-PELANMGRGAPPPSSGHRDRYRGYGGGRS 466 >UniRef50_UPI0000E87E35 putative ATP-dependent RNA helicase protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87E35 Length = 427 Score = 560 bits (1445), Expect = e-158, Method: Composition-based stats. Identities = 171/430 (39%), Positives = 264/430 (61%), Gaps = 7/430 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF + L IL+A+ E GY +PTPIQ ++IP ++ + ++ASAQTGTGKTA F LP+L Sbjct: 1 MSFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPIL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + +G R LI++PTRELA QI ++++ YS+YL I S+ + GG+S Q Sbjct: 61 DKLTKNRSEGRG---PRVLIVSPTRELATQITDSIKKYSRYLRINSITITGGISYGLQNR 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +D+LVATPGRLLDL Q + +E+++LDEADRMLDMGF+ DIR++ K Sbjct: 118 MFSKPIDILVATPGRLLDLYQQKKINFKGLEVMILDEADRMLDMGFVPDIRKIYNATSKK 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVD-KKRKRELLSHM 239 +Q L+FSATF I+ +A++ L NP+ I + + + Q ++F D + K+++L H Sbjct: 178 QQMLMFSATFDPPIQKIAQEFLTNPVTISIKPDVSGHKNIKQLIYFADNQSHKQQMLDHF 237 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 I Q ++FT TK A+ L++QL I+++A+HG+ SQG+RT+ + FK + ++L Sbjct: 238 IKNDEVTQAIIFTATKRMADQLSDQLYHSDIKTSALHGDMSQGSRTKTINRFKRNETKIL 297 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+A+RG+D++ + HV NY++P EDY+HRIGRTGRA G A+SLV + + LR Sbjct: 298 VATDLASRGIDVKNISHVFNYDMPRFAEDYIHRIGRTGRANNKGIAISLVSPTDREFLRK 357 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRG---QGGGRGQQQPRRGEGG 416 IE+ +I +IPG E +A+ + + R +G + +++ R Sbjct: 358 IERFTNLKIEIASIPGMEATILKEAKAPKRKSKGRSFVKKGKVFKNEANAKKRIRSKPVF 417 Query: 417 AKSASAKPAE 426 K+ + P+ Sbjct: 418 GKTNQSAPSR 427 >UniRef50_C5KR89 RNA helicase, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5KR89_9ALVE Length = 584 Score = 560 bits (1445), Expect = e-158, Method: Composition-based stats. Identities = 147/373 (39%), Positives = 216/373 (57%), Gaps = 10/373 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ +++ + GY EPT IQ+ P L GRD++ AQTG+GKT F LP + Sbjct: 175 TFEQGQFPEVLMKEFEKAGYTEPTNIQKIGWPVALSGRDMVGVAQTGSGKTVAFMLPAII 234 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + P G PV L+L PTRELA Q+ + K + + +FGGV Q Sbjct: 235 HVNAQAPLKHGDGPV-VLVLVPTRELAMQVQAEATRFGKMAGLMNTAIFGGVPRYNQAND 293 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GV++ +ATPGRLLD L +V LVLDEADRMLDMGF IRR+++++ R Sbjct: 294 LRRGVEICIATPGRLLDFLETGVTNLKRVTYLVLDEADRMLDMGFEPQIRRIVSQIRPDR 353 Query: 182 QNLLFSATFSDDIKALAEKLLH-NPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 Q ++SAT+ +++++A P+ + V A+ V Q V V + KR++ Sbjct: 354 QTTMWSATWPKEVQSMARDFCREEPIRLTVGNTQLQANPDVKQRVEVVSEMDKRQMFFDW 413 Query: 240 IGKGNWQ--QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + + + +++VFT TK GA+ L ++ + +A+IHG+K Q R R L DFK+G Sbjct: 414 LKETYPKGSRIIVFTETKKGADALTREMRYNNFNAASIHGDKEQRERDRILNDFKTGRCN 473 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLV-----CVD 352 VLVATD+A RGLDI+ + VVNY++P EDYVHRIGRTGRA A G +L+ + D Sbjct: 474 VLVATDVAQRGLDIKNVEWVVNYDMPKTVEDYVHRIGRTGRAGAVGNSLTFITNDTHTPD 533 Query: 353 EHKLLRDIEKLLK 365 ++ +DI K ++ Sbjct: 534 RVRMAKDIVKCME 546 >UniRef50_B9SAJ6 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAJ6_RICCO Length = 956 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 160/457 (35%), Positives = 243/457 (53%), Gaps = 38/457 (8%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F++ G P+IL + + G+ PTPIQ Q P L RD++A A+TG+GKT G+ +P Sbjct: 488 ITFEASGFPPEILNDIRDAGFLAPTPIQAQTWPIALRNRDIVAIAKTGSGKTLGYLIPAF 547 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 ++ RQ + L+L PTRELA QI + V + + + ++GG PQ+ Sbjct: 548 --ILLRQCRNNPQNGPTVLVLAPTRELATQIQDEVIKFGRSSRVSCTCLYGGAPKGPQLK 605 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L G D++VATPGRL D+ + QV +LVLDEADRMLDMGF IR+++ ++P + Sbjct: 606 ELTRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPR 665 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN--TASDQVTQHVHFVDKKRKRELLSH 238 RQ L+++AT+ +++ +A LL NP+++ + + A+ +TQ+V V + K L Sbjct: 666 RQTLMYTATWPKEVRKIANDLLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKESRLGQ 725 Query: 239 MIGKGNWQ-QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++ +V++F TK + LA + +AAIHG+KSQG R L F+SG Sbjct: 726 ILRAQERGSKVIIFCSTKRLCDQLARSIGHQ-FGAAAIHGDKSQGERDWVLNQFRSGKSP 784 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGE-------ALSL-- 348 +LVATD+AARGLDI+++ V+NY+ P EDYVHRIGRTGRA ATG A ++ Sbjct: 785 ILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVNVAAHMIATTIWM 844 Query: 349 ---VCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGR 405 V V+E L+ + EKLL + I ++ R +R Sbjct: 845 VVDVDVEEEGLMVE-EKLL----TEVGIEVLAVVLKDRSRSRSYDRFER----------- 888 Query: 406 GQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQ 442 PR K +A +E P + P Sbjct: 889 ----PRVSRFDEKDVTAPGSEAPESGMSPMSPGAHGN 921 >UniRef50_Q0W8H7 ATP-dependent RNA helicase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W8H7_UNCMA Length = 497 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 151/392 (38%), Positives = 223/392 (56%), Gaps = 6/392 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F L L+P I+RAV E G+ E TPIQ+QAIP +EG+DL+ A+TGTGKTA F +P++ Sbjct: 2 VKFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMV 61 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + + V+ L++ PTRELA Q+ E + K IRS+ ++GG Q+ Sbjct: 62 EAI------RPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVK 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L ++V TPGRLL+ + V+ + I VLDEAD+MLDMGFI + ++L KLP + Sbjct: 116 ALEELPHIVVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLPER 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT S ++ LA K L +P IE Q+ + +K+K E L+ ++ Sbjct: 176 RQTLLFSATLSPPVQMLARKYLKDPELIEFEEEGITVPTTVQYYIEMPEKQKFEALTRLL 235 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + + +VF T+ LA+ L + G + +HG+ Q R L FK+G++ +LV Sbjct: 236 DQEKPELAIVFVATRIRVGELAKALVERGYHALGLHGDLLQYQRENTLDKFKAGEVSILV 295 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI+ + HV N+++P P+ YVHRIGRTGRA G A + V + L I Sbjct: 296 ATDVAARGLDIQGVTHVYNFDIPRDPDSYVHRIGRTGRAGNAGTATTFVTPKDKTALEAI 355 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQ 392 E+ + +I PG E + + Sbjct: 356 EQAIDHQITSKPAPGGAESTEKNIEAVIEKIR 387 >UniRef50_C6Q9Z2 DEAD/DEAH box helicase domain protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6Q9Z2_9RHIZ Length = 657 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 190/451 (42%), Positives = 263/451 (58%), Gaps = 6/451 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F++ G + + RA+ + GY PTPIQ QA+P LEGRDL+ A+TG+GKTA F LPLLQ Sbjct: 27 NFEAFGFAEPLSRALTQCGYVTPTPIQVQALPPQLEGRDLLGMAETGSGKTATFVLPLLQ 86 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + ++ + V AL+L PTRELA QI + V ++ + IR VV GGVS PQ+ Sbjct: 87 KIASQ-NSEPAPKQVLALVLAPTRELAIQIDQEVASLARNMRIRRAVVLGGVSKGPQINA 145 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV VLVATPGRLLDL + L +VE LVLDEADRM DMGFI DI++++ LP R Sbjct: 146 LKRGVHVLVATPGRLLDLINMRTCDLSRVETLVLDEADRMFDMGFIRDIKKIVAMLPEAR 205 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 + LFSAT +IK A +L P ++++ ++ D++ Q V V K+ L ++ Sbjct: 206 RTALFSATMPVEIKKFAYDILKEPYRVDLSSKSVVVDRIDQKVMIVRTTEKQSRLHTILA 265 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 ++V+VFTRTK GA+ +AE+L GI ++A HGNK+Q AR RAL DF G IRVLVA Sbjct: 266 DEACKRVIVFTRTKRGADRVAERLGMAGISASAFHGNKAQNARQRALNDFMMGHIRVLVA 325 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TDIAARG+D+ + HVVN+++P PE YVHR+GRT R +G A+SL E + + IE Sbjct: 326 TDIAARGIDVSNITHVVNFDMPLDPETYVHRVGRTARKGNSGIAISLCDPGERQEITAIE 385 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSAS 421 +++K+++ IA G E P + R G + G R G + Sbjct: 386 RMMKQKLEVIADVGGEALPMPERRQ-----HHRAETGPRRDGDRQHHHAGGRRDGREGGQ 440 Query: 422 AKPAEKPSRRLGDAKPAGEQQRRRRPRKPAA 452 R GD + R R+P Sbjct: 441 RGERPARPHRNGDERANASPARNGENRRPYE 471 >UniRef50_Q9NXZ2 Probable ATP-dependent RNA helicase DDX43 n=23 Tax=Euteleostomi RepID=DDX43_HUMAN Length = 648 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 143/407 (35%), Positives = 233/407 (57%), Gaps = 4/407 (0%) Query: 2 SFDS-LGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +FD P+++ + + G+++PTPIQ QA P VL+G DL+ AQTGTGKT + +P Sbjct: 242 TFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGF 301 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 HL+ + R L+LTPTRELA Q+ YS Y +RS+ V+GG + + Q+ Sbjct: 302 IHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYS-YKGLRSVCVYGGGNRDEQIE 360 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L+ GVD+++ATPGRL DL+ N V L + LVLDEAD+MLDMGF I ++L + Sbjct: 361 ELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPD 420 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 RQ ++ SAT+ + LA+ L P+ + V + A V Q++ ++ K + Sbjct: 421 RQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTF 480 Query: 240 IGKGN-WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 + + +V+VF K A+HL+ L I ++HG++ Q R +AL +FK+G +R+ Sbjct: 481 LQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRI 540 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 L+ATD+A+RGLD+ ++ HV N++ P E+YVHRIGRTGRA TG +++ + ++ ++ Sbjct: 541 LIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVAS 600 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGR 405 ++ +L++ I KA + +++ +G+ Sbjct: 601 ELINILERANQSIPEELVSMAERFKAHQQKREMERKMERPQGRPKKF 647 >UniRef50_Q3IJ60 ATP-dependent RNA helicase, cold shock protein A n=3 Tax=Alteromonadales RepID=Q3IJ60_PSEHT Length = 616 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 157/391 (40%), Positives = 240/391 (61%), Gaps = 8/391 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+SL LSP IL+AV E GY+ P+ IQ Q IP +LE +D++ AQTGTGKTA F LPLL Sbjct: 5 VTFESLNLSPAILKAVEELGYKTPSEIQAQCIPLLLERKDVLGLAQTGTGKTAAFALPLL 64 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 ++ + + L+LTPTRELA Q+ E Y+K++ I L ++GG S + Q+ Sbjct: 65 NNID------PSVKQPQILVLTPTRELAIQVAEAFEQYAKHVRGIEVLALYGGQSYSIQL 118 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 LR G V+VATPGRL+D ++ +K D ++ LVLDEAD ML MGFI D+ ++ K P Sbjct: 119 SALRRGAQVIVATPGRLIDHINRGTIKFDALQALVLDEADEMLRMGFIDDVESIMEKTPR 178 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 ++Q LFSAT I+ ++ K ++NP ++ ++ RN+ V Q K + + Sbjct: 179 EKQTCLFSATMPKQIQNISSKYMNNPEQVHISARNSTVSSVEQVFWNAS-IHKNKAIVRF 237 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++ +VF RT++ LAE L ++G +A ++G+ +Q AR R + KSG + V+ Sbjct: 238 LEAEQYEGAIVFVRTRNDTVQLAELLEREGFSAAPLNGDMNQQARERTVERLKSGMLNVV 297 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 +ATD+AARGLD++ L V+NY++P E YVHRIGRTGRA TG+A+ V +E LL++ Sbjct: 298 IATDVAARGLDVDRLSLVINYDIPQDSEAYVHRIGRTGRAGRTGKAILFVKHNERYLLKN 357 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 I + +I ++ +P + + E +Q Sbjct: 358 IIRHTNSDIAQVELPTAKIVEEKRIEALQAK 388 >UniRef50_P44586 Cold-shock DEAD box protein A homolog n=29 Tax=Pasteurellaceae RepID=DEAD_HAEIN Length = 613 Score = 559 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 158/466 (33%), Positives = 246/466 (52%), Gaps = 24/466 (5%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+ LGL IL+AV++ G+ P+PIQQ IP +L G D++ AQTG+GKTA F LPLL Sbjct: 5 ITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLL 64 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 + + + L++ PTRELA Q+ + + KY R + ++GG + Q+ Sbjct: 65 AQID------PSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQL 118 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ G V+V TPGR+LD + + L ++ +VLDEAD ML MGFI D+ V+ +LP Sbjct: 119 RALKQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPE 178 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 Q LFSAT + I+ + ++ +++P E+++ N + + Q +V RK E L Sbjct: 179 NHQTALFSATMPEPIRRITKRFMNDPQEVKIKVNNENAPDIDQSCWYVHGVRKNEALLRF 238 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + ++ ++F RTK G + E L K+G RSAA++G+ +Q R + L ++G + ++ Sbjct: 239 LEVEDFDAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDIV 298 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+DIE + VVNY++P E YVHRIGRTGRA +G AL V E +LLR+ Sbjct: 299 VATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLRN 358 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKS 419 IE L+KK I + +P + + + ++ + + + ++ Sbjct: 359 IEHLMKKGINEVELPNHLVLQECRRKKFVAKITKQLEHHDLEQYRSLLEDLFTADQDQEN 418 Query: 420 -----------------ASAKPAEKPSRRLGDAKPAGEQQRRRRPR 448 P EK R D E R R Sbjct: 419 IAAAMLMLLQGKQKLILPPDPPMEKRRRERNDRGDRRENPRSAERR 464 >UniRef50_O97031 DjVLGA n=1 Tax=Dugesia japonica RepID=O97031_DUGJA Length = 726 Score = 559 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 155/382 (40%), Positives = 223/382 (58%), Gaps = 11/382 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF L L P + ++ Y PTP+Q+ A+P +++ RDLMA AQTG+GKTA F +PLL Sbjct: 212 SFLELKLHPIVSHNISLTQYTRPTPVQRYAVPIIMQRRDLMACAQTGSGKTAAFLIPLLS 271 Query: 62 HLITRQPHAK------GRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSI 115 + P + ALIL PTRELA QI + R +S +R VV+GG I Sbjct: 272 MMYQDGPGNSLSHSGYKKEYPVALILAPTRELAVQIYDEARKFSYRSLVRPCVVYGGRDI 331 Query: 116 NPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLT 175 Q+ + G ++LVATPGRL D+ + + LD + LVLDEADRMLDMGF IR+++ Sbjct: 332 RGQLQDISQGCNMLVATPGRLSDMLERCKIGLDCIRYLVLDEADRMLDMGFEPQIRKIVE 391 Query: 176 KL----PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKR 231 + P +RQ L+FSATF +I+ LA L + L + V + + S +TQ + +VD+ Sbjct: 392 QTNMPPPGQRQTLMFSATFPREIQMLASDFLKDYLFLRVGKVGSTSQNITQRIVYVDENE 451 Query: 232 KRELLSHMIGKGNWQQ-VLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALAD 290 KR+ L ++ + +LVF TK GA+ L L+ +G A+IHG++SQ R AL Sbjct: 452 KRDHLLDILTDIDSDSLILVFVETKRGADALEGFLHTEGSCVASIHGDRSQSDRELALQS 511 Query: 291 FKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC 350 F+ G +LVAT +AARGLDI + V+NY+LP E+YVHRIGRTGR GEA+S Sbjct: 512 FREGSTPILVATRVAARGLDIPNVKFVINYDLPTDIEEYVHRIGRTGRVGNLGEAISFYT 571 Query: 351 VDEHKLLRDIEKLLKKEIPRIA 372 + + +++ +L + + Sbjct: 572 DKNNNVAKELVDILLEANQIVP 593 >UniRef50_D2QY81 DEAD/DEAH box helicase domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QY81_9PLAN Length = 458 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 170/448 (37%), Positives = 249/448 (55%), Gaps = 9/448 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F S+ LS ++ A+ + GY PTPIQ IP LEG D++ A+TGTGKTA F +P+L+ Sbjct: 13 TFASMDLSDQMMAALEKAGYEYPTPIQAGLIPRALEGVDVVGQARTGTGKTASFVIPILE 72 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L +G +ALIL PTRELA Q+ + V S+ L I V+GG I Q+ K Sbjct: 73 LLD----IERGAPTPQALILVPTRELAVQVRDEVVKLSEGLKINCAAVYGGKPIKSQVDK 128 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G V+V TPGR+LD + + +E +VLDEADRMLD+GF DI R+L + P +R Sbjct: 129 LKKGCHVVVGTPGRVLDHIARGTIDFTHIECVVLDEADRMLDIGFRPDIERILKRCPRER 188 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LL SAT I LA++ ++ P + + + + D + Q V+ RK +LL ++ Sbjct: 189 QTLLLSATVPPPIAKLAQRYMYEPEMLNFSPADVSVDTIEQKYFTVEHDRKFDLLMKLLL 248 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +Q +VF RTK G + + ++L K +AAIHG+ SQG R R +A F+ G +R LVA Sbjct: 249 REEPKQAIVFCRTKRGTDKVYQKLTKKLGNTAAIHGDLSQGQRDRVMAGFRDGSVRYLVA 308 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+ RG+D+ + H+VN+++P +DYVHR+GRTGR G A + VC DE L IE Sbjct: 309 TDVIGRGIDVSTVSHIVNFDIPVFCDDYVHRVGRTGRMGREGVAYTFVCPDEGHELTRIE 368 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGR-----GQGGGRGQQQPRRGEGG 416 + + K + R + +EP + + G+ G + EG Sbjct: 369 ERINKLLKRDEMRDFEPVGYGERSARAPAAPTQVISGKYMHGGNASGVAPTESATPSEGD 428 Query: 417 AKSASAKPAEKPSRRLGDAKPAGEQQRR 444 + +A A PA R G K G++ RR Sbjct: 429 SPAAEAAPAATEKRDSGLGKRGGKKYRR 456 >UniRef50_C0W1P0 Superfamily II helicase n=2 Tax=Actinomyces RepID=C0W1P0_9ACTO Length = 616 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 161/401 (40%), Positives = 236/401 (58%), Gaps = 9/401 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L L ++L A+ E G+ PTPIQ+QAIP +LEGRD++ AQTGTGKTA F LP+L Sbjct: 6 TFADLNLPENVLSAITEMGFETPTPIQEQAIPHLLEGRDIVGIAQTGTGKTAAFGLPMLA 65 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMM 120 H+ G V+A++L PTRELA Q + ++ ++ ++ + V+GG S PQ+ Sbjct: 66 HID------PGFNAVQAIVLAPTRELAMQSATAIESFAAHMPKVKVVTVYGGASYTPQIK 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA- 179 L+ G V+V TPGR++DL + A+KL+ V +LVLDEAD ML MGF D+ + +P Sbjct: 120 GLKSGAQVVVGTPGRVIDLIEKGALKLNNVSVLVLDEADEMLRMGFAEDVETIAASMPES 179 Query: 180 -KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 KR LFSAT D I+ +A++ L +P+ IEVAR+++ + + Q V K K L Sbjct: 180 GKRITALFSATMPDFIQRVADQHLTDPVRIEVARQSSTVENIHQTYAVVPFKHKLGALGR 239 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + +VF RT+ A+ +A + G +AAI G+ SQ R R ++ + G + V Sbjct: 240 VLATRDEDAAIVFVRTRVDADEVAVDMATRGFTAAAISGDVSQNERERIVSRLRDGSLDV 299 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLD+E + V+N+++P E YVHR+GRTGRA G +L+ E LR Sbjct: 300 LVATDVAARGLDVERIGLVINFDVPRETEAYVHRVGRTGRAGRAGRSLTFFTPKEQFRLR 359 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGR 399 IEKL ++ I IP +A + + R GR Sbjct: 360 QIEKLTGTKMEEIVIPSPREVSEFRARRLVSLMPDRIELGR 400 >UniRef50_Q4FSS4 Possible ATP-dependent DEAD/DEAH box RNA-helicase n=5 Tax=Proteobacteria RepID=Q4FSS4_PSYA2 Length = 567 Score = 559 bits (1441), Expect = e-158, Method: Composition-based stats. Identities = 179/476 (37%), Positives = 258/476 (54%), Gaps = 28/476 (5%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F L ++ IL A+ GY PTPIQ +AIP L+GRDL+ SAQTG+GKTA F +P+L Sbjct: 44 VTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFVIPVL 103 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 L + +ALILTPTRELA Q+ ++VR YSK + + + + GG N Q+ Sbjct: 104 DRLS---RATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQI 160 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ GV V+VATPGRLLD + V L +EILVLDEADRMLDMGF DI +L P Sbjct: 161 TALKKGVQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADDISDILRAAPI 220 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLSH 238 RQ ++ SAT+ + +A NP + + S + + V++ D K LL Sbjct: 221 DRQTIMCSATWDGPVGKIAASFTKNPERVSI---KVESAHIEEKVYYCDDFDHKNRLLDK 277 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + +Q+++F TK LA+QL + G +++ +HG+ Q R R + D ++G ++ Sbjct: 278 IVCHKDMEQIIIFAATKRSTEKLAKQLQEAGHKASFLHGDLPQSKRNRIVQDLRNGKCKI 337 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLD+ L HV+NY+LP EDYVHRIGR GRA TG A+SL +D+ L Sbjct: 338 LVATDVAARGLDVPALSHVINYDLPRQTEDYVHRIGRCGRAGRTGVAISLCSMDDRPQLN 397 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQ-------------------NGRQQRGGGGR 399 I + L +++ I G EP + + GR + GG Sbjct: 398 AINRYLDRKMEASVIEGMEPKKTYVPSENKGNGRGRGRGRSNGGGNGNGQGRGRSAGGYA 457 Query: 400 GQGGGRGQQQPR-RGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 G G + Q R R G + +A+ + A S G + + + R KP + Sbjct: 458 GSGASKPSGQGRGRPSGDSSNATGQRASNDSGYQGKPRDSSGKPNERSGGKPYQGK 513 >UniRef50_Q11039 Cold-shock DEAD box protein A homolog n=27 Tax=Bacteria RepID=DEAD_MYCTU Length = 563 Score = 558 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 157/415 (37%), Positives = 233/415 (56%), Gaps = 9/415 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F L + P +LRA+ + GY PT IQ IPA++ G D++ AQTGTGKTA F +P+L Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMM 120 + +AL+L PTRELA Q+ E Y YL+ + L ++GG S Q+ Sbjct: 74 KIDITSKV------PQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLA 127 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR G V+V TPGR++D + + L +V+ LVLDEAD ML MGF D+ R+L++ P Sbjct: 128 GLRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEY 187 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 +Q LFSAT I+ L+ K LH+P E+ + ++ ++Q V + K + L+ ++ Sbjct: 188 KQVALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVAR--KMDALTRVL 245 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++ ++VF RTK +AE+L G +AAI G+ Q R R + + GDI +LV Sbjct: 246 EVEPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILV 305 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD+E + HV+NY++P+ E YVHRIGRTGRA +G AL V E LL+ I Sbjct: 306 ATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAI 365 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG 415 EK ++ + +P E + + + GG + R ++ R Sbjct: 366 EKATRQTLTEAQLPTVEDVNTQRVAKFADSITNALGGPGIELFRRLVEEYEREHD 420 >UniRef50_Q7NHM7 Gll2508 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NHM7_GLOVI Length = 437 Score = 558 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 164/398 (41%), Positives = 241/398 (60%), Gaps = 6/398 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +LGLS +++A+ E G+ +PTPIQ ++IP +L+GRDL+A AQTGTGKTA F LPL+ Sbjct: 5 FSALGLSESVVKALDELGFEQPTPIQLKSIPFLLDGRDLLAQAQTGTGKTAAFGLPLVDR 64 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + V+AL+L PTRELA Q+ E + YSK+ +R L ++GG I+ QM +L Sbjct: 65 SDPQ------DARVQALVLAPTRELAVQVCEAIHTYSKHSGVRVLPIYGGQPIDRQMRRL 118 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 R G ++V TPGR+LDL + ++ L + LVLDEAD+MLDMGFI +++ +L P +RQ Sbjct: 119 RAGAQIVVGTPGRVLDLMRRGSLDLSALRTLVLDEADQMLDMGFIEEVQTILDAAPPERQ 178 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 + FSAT I+ LA + L P+ + + + + Q V+FV+ K + + L+ ++ Sbjct: 179 LVFFSATLPASIRKLAARHLRTPMTLTMPAEERDTPAIAQRVYFVNFKNRAQALTRVLAA 238 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 + L+FTRTK A+ LAEQL DG R+ A+HG+ +Q AR L F+ + V+VAT Sbjct: 239 EDPASALIFTRTKQAADELAEQLQDDGHRAEALHGDLNQSAREAVLGRFRRQQLNVVVAT 298 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARGLDI +L HV+NY++P E Y+HRIGRTGRA TG A+S + LR IE+ Sbjct: 299 DVAARGLDIADLSHVINYDMPQDGESYIHRIGRTGRAGRTGVAISFALPTDRYRLRLIER 358 Query: 363 LLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRG 400 + IP + E + +++ Sbjct: 359 ATGSTLVPAKIPSAGEIQVRRTERLVEQLRRQLQADES 396 >UniRef50_C7LND0 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LND0_DESBD Length = 545 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 209/449 (46%), Positives = 278/449 (61%), Gaps = 7/449 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSFD LGL ++L+A+ +GY PT IQ QAIP +L GRD++A AQTGTGKT F LP++ Sbjct: 1 MSFDQLGLRVELLKAIKNKGYEAPTAIQAQAIPVILAGRDILARAQTGTGKTDAFGLPIV 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L RALILTPTRELA Q+GE+++ Y++ +++R V FGGV I PQ+ Sbjct: 61 QIL---GLTRGNGHHPRALILTPTRELALQVGESIKAYARKVSLRCTVAFGGVRIEPQIA 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L G+D+LVATPGRLLDL Q + L +E LV DEADRMLD+GF +I +L LP Sbjct: 118 RLERGIDILVATPGRLLDLASQEHLSLASIEFLVFDEADRMLDLGFSGEINAILDLLPTV 177 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 R+ +LFSAT++ IKALA K+L P IE+ A++ V Q VH V+K K LL H+I Sbjct: 178 RRTMLFSATYTPQIKALAAKMLDKPEYIEITPDTAAAEAVQQKVHHVNKDNKLPLLLHLI 237 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 K ++LVF RT+ AN L ++L GI AA+HG+KSQ R R L +FK G I +LV Sbjct: 238 EKQKQDRILVFARTRTWANRLTDKLAAHGISVAALHGSKSQSLRKRTLEEFKDGKIHILV 297 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI LP VVNY++PN PEDYVHRIGRTGRA +G A+SLV +E LL I Sbjct: 298 ATDVAARGLDISNLPLVVNYDIPNSPEDYVHRIGRTGRAGVSGIAVSLVSPEERNLLLAI 357 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 E LL+ +IP A+ G+ D + + + G + R ++ + AK Sbjct: 358 EDLLRHQIPVEAVKGFTEDSDVPDFVL----YRPGNPKSERNAPRAIKELVAKKSPAKLT 413 Query: 421 SAKPAEKPSRRLGDAKPAGEQQRRRRPRK 449 +KP ++ G + + RK Sbjct: 414 VQGRGKKPKDAGPESTTRGNKNEKSDARK 442 >UniRef50_Q9GNP1 Vasa homolog n=25 Tax=Eumetazoa RepID=Q9GNP1_CIOSA Length = 770 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 167/418 (39%), Positives = 245/418 (58%), Gaps = 14/418 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ GL +L V Y PTP+Q+ +IP + RDLMA AQTG+GKTA F LP+L Sbjct: 314 TFEVAGLPETVLANVKRANYERPTPVQKYSIPIINADRDLMACAQTGSGKTAAFLLPVLT 373 Query: 62 HLIT---RQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 LIT + ++ RA+++ PTREL QI R +S+ +R +V +GG S+N Q Sbjct: 374 KLITNGLQSSQFSEKQTPRAIVVGPTRELIYQIFLEARKFSRGTVVRPVVAYGGTSMNHQ 433 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTK-- 176 + L+ G +L+ATPGRL+D ++ V LD VE ++LDEADRMLDMGF +IR++ + Sbjct: 434 IRDLQRGCHILIATPGRLMDFINRGLVGLDHVEFVILDEADRMLDMGFETEIRKLASSPG 493 Query: 177 LPA--KRQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKR 233 +P+ R L+FSATF D+I+ LA L + L + V R A VTQ + VD+ KR Sbjct: 494 MPSKSDRHTLMFSATFPDEIQRLAHDFLREDFLFLTVGRVGGACTDVTQSIIQVDQDDKR 553 Query: 234 ELLSHMIGK--GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADF 291 L +I + LVF TK GA+ LA L+++G + +IHG++ Q R +AL DF Sbjct: 554 AKLLELISDVAETRSRTLVFVETKRGADFLACMLSQEGCPTTSIHGDRLQQEREQALRDF 613 Query: 292 KSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLV-C 350 KS +L+AT +AARGLDI ++ HV+NY++P ++YVHRIGRTGR G A + Sbjct: 614 KSAVCPILIATSVAARGLDIPKVEHVINYDMPKEIDEYVHRIGRTGRCGNLGRATTFYDN 673 Query: 351 VDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQR-GGGGRGQGGGRGQ 407 + +L R + K+L + + +PG+ + + A G++ GG + GGR Sbjct: 674 NKDGELARSLVKILSEA--QQEVPGWLEECAESAVGSSFGKEGGFGGRDFRKRGGRND 729 >UniRef50_C4LZM8 DEAD/DEAH box helicase, putative n=4 Tax=Entamoeba RepID=C4LZM8_ENTHI Length = 578 Score = 557 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 151/408 (37%), Positives = 229/408 (56%), Gaps = 14/408 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F + L ++ + + G+ P P+Q+ IP VL+ RDLM+ AQTG+GKTA F P++ Sbjct: 132 TFYDIDLGEELDHNIFKAGFYHPMPVQKATIPIVLDKRDLMSCAQTGSGKTAAFLFPIIS 191 Query: 62 HLITRQPHAKGRRP-------VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVS 114 ++ P + ALIL PTREL QI E +++ IRS+ V+GG Sbjct: 192 DILKNPPMPRQSNFSHRVTVFPVALILAPTRELGQQIYEEAVRFTEDTPIRSVCVYGGSD 251 Query: 115 INPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVL 174 Q+ ++ G D+LVATPGRLL + V L V L+ DEADRMLDMGF IR + Sbjct: 252 SYTQIQEMGKGCDILVATPGRLLYFTEKKIVSLSSVRYLIFDEADRMLDMGFEPQIREIC 311 Query: 175 T--KLPA--KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK 230 ++P KRQ L+FSATF I+ LA L + + I V R + + + Q + +V+++ Sbjct: 312 EDNEMPPVGKRQTLMFSATFPKQIQRLAADFLDDYVFITVGRAGSTVESIQQIILWVEEE 371 Query: 231 RKRELLSHMIGKG--NWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRAL 288 K+E + ++G+ Q+ ++F TK GA+ L L G + +IHG++SQ R +L Sbjct: 372 IKQEAILDVLGEFAGKGQKTVIFVETKRGADILENYLYDHGYKVDSIHGDRSQADRDFSL 431 Query: 289 ADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSL 348 FK I++LVATD+A+RGLDI ++ V+NY++PN E YVHR+GRTGRA G A++ Sbjct: 432 KRFKENVIQLLVATDVASRGLDIPDIEVVINYDMPNEIESYVHRVGRTGRAGKKGTAITF 491 Query: 349 VCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGG 396 + L+ + LL++ I E +P + R ++GG Sbjct: 492 INEKTQNLIPPLVSLLEEAKQTIP-DWLEEKAQEYRKPFGSKRGRKGG 538 >UniRef50_Q3AX69 DEAD/DEAH box helicase-like n=18 Tax=cellular organisms RepID=Q3AX69_SYNS9 Length = 624 Score = 557 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 153/402 (38%), Positives = 236/402 (58%), Gaps = 7/402 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 FD G S +L+ +A++GY +P+PIQ+ A P ++ GRDL+ AQTGTGKTA F LPLL+ Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSK-YLNIRSLVVFGGVSINPQMMK 121 L G++ + L+L PTRELA Q+ ++ + Y+ + +++ L V+GG Q+ Sbjct: 133 L------ESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRSQIST 186 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GVDV+V TPGR++D Q + + LVLDEAD ML MGFI D+ +L +LP +R Sbjct: 187 LRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEMLRMGFIDDVEWILEQLPKER 246 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q +LFSAT +I+ L+++ L++P E+ + ++ + Q V K E L ++ Sbjct: 247 QVVLFSATMPPEIRRLSKRYLNDPAEVTIKTKDQDGKLIRQRAITVPMSHKLEALQRVLD 306 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + V++F RTK +AE L G + A ++G+ Q R R + +SG + VLVA Sbjct: 307 ACGGEGVIIFARTKVITLTVAETLEAAGHQVAVLNGDVPQNQRERTVERLRSGSVDVLVA 366 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD+E + V+NY++P E YVHRIGRTGRA TGEA+ + E + +R++E Sbjct: 367 TDVAARGLDVERIGLVINYDMPFDSEAYVHRIGRTGRAGRTGEAVLFMTPRERRFIRNLE 426 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGG 403 + + I + +PG + + ++ + G G Sbjct: 427 RATGQPIEMMEVPGNTAINQGRLDRLRKRLSEAANGVAGNSE 468 >UniRef50_UPI000192615D PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 n=1 Tax=Hydra magnipapillata RepID=UPI000192615D Length = 745 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 145/400 (36%), Positives = 224/400 (56%), Gaps = 6/400 (1%) Query: 1 MSFDSLGLS-PDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPL 59 ++FD P+IL + + EP+PIQ QA P +L G D + AQTGTGKT F LP Sbjct: 271 LTFDDAFYDYPEILSTIKSNNFTEPSPIQCQAWPVLLSGMDCIGIAQTGTGKTLAFLLPA 330 Query: 60 LQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 H+ + R L+L+PTRELA QI V+ + Y IRS+ ++GG + Q+ Sbjct: 331 FIHIDGQPIPRDKRGGPSCLVLSPTRELAQQIEMEVKKF-HYRGIRSVCIYGGGDRSAQI 389 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 +R GV++++ TPGRL DL + V LVLDEADRMLDMGF +I+++L + Sbjct: 390 NLVRQGVEIIIGTPGRLNDLLMNGFFSVKSVTYLVLDEADRMLDMGFEPEIKKILLDIRP 449 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSH 238 RQ ++ SAT+ ++ +A+K L +P+ I V + A V+Q V F+++ K++ + Sbjct: 450 DRQTIMTSATWPPGVQRMADKYLRDPIRINVGSLDLQACHSVSQLVEFIEQHEKQDRVMD 509 Query: 239 MIGKGNWQ-QVLVFTRTKHGANHLAEQLNKDG--IRSAAIHGNKSQGARTRALADFKSGD 295 I ++++F K A+ ++ L G I IHG++ Q R +AL D K+G Sbjct: 510 FISAMAPDGKLIIFVGRKVTADDISSNLAMKGTNIGIQCIHGDRDQSDREQALEDMKTGA 569 Query: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK 355 RVL+ATD+A+RGLDI++L HV+NY+ P EDYVHRIGRTGRA +G AL+ V ++ Sbjct: 570 ARVLIATDVASRGLDIKDLTHVLNYDFPRHIEDYVHRIGRTGRAGRSGCALTFVTREDWM 629 Query: 356 LLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRG 395 + + ++++ + E K + ++ Sbjct: 630 HVAKLIPIMEEAGQEVPEELIEMAERWKKTQDRRDEEKSA 669 >UniRef50_Q54QS3 Probable ATP-dependent RNA helicase ddx3 n=3 Tax=Eukaryota RepID=DDX3_DICDI Length = 712 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 147/424 (34%), Positives = 218/424 (51%), Gaps = 17/424 (4%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF + L +L + Y +PTP+Q+ A+P +L+ RDLMA AQTG+GKTA F P++ Sbjct: 248 SFADVDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFPIIS 307 Query: 62 HLITRQPHA---------KGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGG 112 ++ RAL+L PTRELA QI + +S + S+V++GG Sbjct: 308 GILLDGAPEAPPAYKPGVPRAACPRALVLAPTRELAQQIFDEANKFSYGSPVSSVVIYGG 367 Query: 113 VSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRR 172 + Q+ +L G D+LVAT GRL+DL + V L +++ LVLDEADRMLDMGF IR+ Sbjct: 368 AEVFHQINELDRGCDILVATTGRLVDLLMRGRVSLSKIKYLVLDEADRMLDMGFEPQIRQ 427 Query: 173 VLTK--LP--AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVD 228 ++++ +P RQ L+FSATF I+ LA L+N + ++V T +TQ + +V Sbjct: 428 IISEFDMPGCRDRQTLMFSATFPKQIQNLAADFLYNYIFLKVGVVGTT-QNITQRIEYVV 486 Query: 229 KKRKRELLSHMI-GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRA 287 ++ K L + G + L+F TK + L LN+ + IHG+ +Q R A Sbjct: 487 EEDKNSYLLDYLSGLKSDGLCLIFVETKRSCDTLTYFLNQRNFPTTCIHGDLTQPERENA 546 Query: 288 LADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALS 347 L F+S LVATDIA+RGL I + V+N++LP YVHRIGRTGRA G A+S Sbjct: 547 LQSFRSFATPFLVATDIASRGLHIGNVNLVINFDLPTDIHIYVHRIGRTGRAGKKGLAIS 606 Query: 348 LVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQ 407 + ++ KL+K IP + + + + Sbjct: 607 FFNEKNKPVGAELLKLMKASNQ--DIPDWFEKMVHNLRMSKGPSNSKSNSPFNKSYNSHH 664 Query: 408 QQPR 411 + Sbjct: 665 NRDD 668 >UniRef50_A5FST0 DEAD/DEAH box helicase domain protein n=5 Tax=Dehalococcoides RepID=A5FST0_DEHSB Length = 561 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 180/452 (39%), Positives = 265/452 (58%), Gaps = 12/452 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF+S P ++ V GY+EPTPIQ QAIP ++ G D++ AQTGTGKTA + LP++ Sbjct: 1 MSFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPII 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q +++ R VR L++ PTRELA QI ++ R + IR ++GGV+++ Q+ Sbjct: 61 QKMLSTP-----RGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIR 115 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +LR GVDV+VA PGRLLD + + + VE L++DEADRM DMGF DI+ +L L Sbjct: 116 RLRSGVDVVVACPGRLLDHIWRGTIDVCGVETLIIDEADRMFDMGFQPDIQSILKCLVQP 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT +++ L + NP+ ++V ++ S V+ V +K LL ++ Sbjct: 176 HQTLLFSATMPPEVRKLTLETQTNPVTVQVGTQSPVSSVSH-SVYPVKSHQKTPLLLEIL 234 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + VL+F RTK+GA +LA++++K G +A++ GN SQ R + F+ G+ ++LV Sbjct: 235 KTVETKSVLIFARTKYGAENLADEISKAGFTTASLQGNLSQNRRHAVMEGFRRGNFKILV 294 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARGLDI+ + HV+NY++P+ PEDY HRIGRTGR TG+A SLV + ++RDI Sbjct: 295 ATDIAARGLDIDHISHVINYDMPDSPEDYTHRIGRTGRFDRTGQAFSLVTGRDGDMVRDI 354 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 ++LL I R+ + G++ + QN Q+R R G +P S Sbjct: 355 QRLLSSPIQRLRVDGFDY--ATTRNDGQNQSQRRDFAPRRGYSHGGYNRPEMA-VNETSQ 411 Query: 421 SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAA 452 + P+E P A+P R RP A Sbjct: 412 TDTPSEMPVS---PARPFNPGFRPSRPANSAP 440 >UniRef50_B8I5B1 DEAD/DEAH box helicase domain protein n=2 Tax=Clostridium RepID=B8I5B1_CLOCE Length = 542 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 150/455 (32%), Positives = 236/455 (51%), Gaps = 13/455 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ LG+S IL+A+ + G++ PT +Q +AIP +L DL+ ++TG+GKTA F + +LQ Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQ 63 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + LILTP RELA Q+ ++R +KYL ++ ++G +IN + Sbjct: 64 ------LTNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKHKTTAIYGQHNINLETQI 117 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L GV ++ TPGR+ D + + LVLDEADRMLDMGF+ + R++ LP +R Sbjct: 118 LNKGVSIVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLDMGFLDQVVRIVKTLPKER 177 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 LLFSAT +I + ++ ++NP+ IE+ + D + Q + V+ K L+ ++ Sbjct: 178 ITLLFSATMPPEIHNICKRYMNNPVTIEIESQTKTVDTIHQVYYRVNYNEKNTQLNRLLI 237 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + ++F TK + + L K G S A+HG+ Q R + FK G +LVA Sbjct: 238 VEKPESCMIFCNTKAAVDRVQSFLGKKGYSSRALHGDIPQSKRLNTIQQFKQGKFHILVA 297 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARG+ IE+L V+NY++PN ++YVHRIGRTGRA G A SLV D+ L +IE Sbjct: 298 TDVAARGIHIEDLSLVINYDVPNDKDNYVHRIGRTGRAGHEGRAFSLVTGDDIISLYEIE 357 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSAS 421 + + I +P E + E Q + + ++ G ++ Sbjct: 358 EHIGTLILEEELPDEEAFTKAREEAAQWIKANSLKEKAPRSASADSSVKQKRTGQNSKSN 417 Query: 422 AKPAEKPS-------RRLGDAKPAGEQQRRRRPRK 449 P +P + K A +QR R + Sbjct: 418 RIPNGRPEYSKRPDGQSRHTGKSASSEQRSERIKS 452 >UniRef50_B0SU57 ATP-dependent RNA helicase, DEAD-box family (DeaD) n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SU57_LEPBP Length = 534 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 153/388 (39%), Positives = 227/388 (58%), Gaps = 7/388 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F S GL P+IL+ + E G+ P+PIQ+QAIP VLEG+DL+A AQTGTGKTA + LP L Sbjct: 17 FQSFGLRPEILQGITEAGFESPSPIQKQAIPLVLEGKDLIAQAQTGTGKTAAYGLPCLNR 76 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + + L+LTPTRELA Q+ + + K+L I++ ++GG S + Q+ ++ Sbjct: 77 IKVEDGM-------QVLVLTPTRELALQVSDELFKLGKHLGIKTTTIYGGSSYSKQITQV 129 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 G V VATPGRLLDL +K + +++LDEAD MLDMGF+ DI + LP KRQ Sbjct: 130 AKGAQVAVATPGRLLDLLKGKELKNFKPSMVILDEADEMLDMGFMDDIESIFNLLPTKRQ 189 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 LLFSAT + IK LA K +P +++A +S + Q + +D+ + + ++ Sbjct: 190 TLLFSATMPEPIKKLASKYQTHPAHVKIAATEKSSKNIEQVYYIIDEAEREIAVVRILDY 249 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 N + ++FT+TK A+ L L+ G A+HG+ +Q R + L G +++LVAT Sbjct: 250 ENPFKAIIFTKTKKEADDLKSTLSFKGYPVEALHGDLNQKQREQVLKSLHDGRVKILVAT 309 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARGLD+++L V+NY LP E Y HRIGRTGRA +G+A++LV E + L ++ Sbjct: 310 DVAARGLDVKDLSLVINYHLPFDSESYTHRIGRTGRAGKSGKAVTLVTTRESRALLRLKG 369 Query: 363 LLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 + A+P + + E Sbjct: 370 TSGTNLTIAALPTKKEVHLSREEDFLKK 397 >UniRef50_C0EAN9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAN9_9CLOT Length = 563 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 141/447 (31%), Positives = 239/447 (53%), Gaps = 6/447 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 + F L LS + +A+ G+ T IQ Q+IP + G D++ +QTGTGKT F +P + Sbjct: 4 IPFAQLNLSDETGQAIEAMGFDNATDIQAQSIPLIRAGYDVIGRSQTGTGKTVAFGVPAV 63 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 + + T + R + LIL PTRELA Q + +KY +R++ ++GG ++ Q+ Sbjct: 64 ELIDTEEL----RNKTQVLILCPTRELAVQACSEIEKIAKYKRGVRAVDIYGGAPMDRQI 119 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 M+L+ G +++V TPGR++D + +KLD +++++LDEAD ML+MGF D+ +L + P Sbjct: 120 MRLKRGANIVVGTPGRVMDHLRRRTLKLDHLKMIILDEADEMLNMGFREDVETILKQTPD 179 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +RQ +LFSAT I AL ++ +P IE+ R+ D + Q + V RK + L + Sbjct: 180 ERQTILFSATMPPAILALTKQYQKDPQLIEINRKQVTLDNIEQQFYEVPMGRKMDALGII 239 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + ++F TK + + L++ G + +HG+ Q RT+ + FK G ++L Sbjct: 240 LQYHDPALSIIFCNTKRMVDEVTAFLDRSGYSAEGLHGDMKQSQRTKVMDSFKRGRTKIL 299 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC-VDEHKLLR 358 VATD+AARG+D+ + +V+NY++P E YVHRIGRTGRA G+A+++ + L Sbjct: 300 VATDVAARGIDVNNVDYVINYDVPQNQEYYVHRIGRTGRAGKEGKAVTICSGRRQVDELY 359 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAK 418 I ++ K I R ++P + E + +Q+ ++ + Sbjct: 360 HIVRMTKSTIKRESLPSGQDIERRSNEGVVARMEQKLAAAEELYYKEVAEELVQKGYNPT 419 Query: 419 SASAKPAEKPSRRLGDAKPAGEQQRRR 445 + +A E R P +Q R + Sbjct: 420 TIAAVALEMAFGRPKTDFPEIKQFRPK 446 >UniRef50_B7S475 Predicted protein n=2 Tax=Bacillariophyta RepID=B7S475_PHATR Length = 575 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 153/380 (40%), Positives = 222/380 (58%), Gaps = 6/380 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F I +A A+ G+ PT IQ QA P L+ +D++ A+TG+GKT GF LP+ Sbjct: 138 MEFKDAPFQERIQQAFAQAGFARPTSIQGQAWPIALQNKDMICVAKTGSGKTCGFLLPVF 197 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + +Q +G L+L PTREL+ QI E + + + L IRS+ +GG S +PQ+ Sbjct: 198 HQHLVKQTRIQGFTKPILLVLAPTRELSVQILEEAQKFGRPLGIRSVCCYGGASKHPQIA 257 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L+ GV+ ++ATPGRL DL L +V+ LVLDEADRMLDMGF IR ++ +P + Sbjct: 258 ALQRGVECVIATPGRLNDLIEMRKADLSKVQYLVLDEADRMLDMGFEPQIRSIILNIPPE 317 Query: 181 -RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN--TASDQVTQHVHFVDKKRKRELLS 237 RQ LLFSAT+ +I+ALA L NP++I V N A+ + Q + + K + L Sbjct: 318 NRQTLLFSATWPKEIQALAHDFLKNPIQINVGEVNALVANKDIQQTIVMCSESEKLDKLE 377 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 ++ +++VF K N LA +L +DG ++HG++ Q RTR + FK G +R Sbjct: 378 QILRDLMHGKIIVFVAKKISCNDLANRLWEDGFAVDSLHGDRPQWERTRVMQAFKGGQLR 437 Query: 298 VLVATDIAARGLDIEELPHVVNYELP---NVPEDYVHRIGRTGRAAATGEALSLVCVDEH 354 VL+ATD+AARGLD++++ VVNY++P N EDYVHRIGRTGRA G+A + + Sbjct: 438 VLIATDVAARGLDVKDVGVVVNYDMPSGVNGVEDYVHRIGRTGRAGNKGKAYTFFTQGDR 497 Query: 355 KLLRDIEKLLKKEIPRIAIP 374 K + ++L K I Sbjct: 498 KNATQLVQVLTKAQQEIPPE 517 >UniRef50_UPI00015B57D6 PREDICTED: similar to DEAD box ATP-dependent RNA helicase n=1 Tax=Nasonia vitripennis RepID=UPI00015B57D6 Length = 715 Score = 557 bits (1436), Expect = e-157, Method: Composition-based stats. Identities = 153/403 (37%), Positives = 231/403 (57%), Gaps = 6/403 (1%) Query: 2 SFDS-LGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +F+ PDIL + +Q + +P+PIQ QA P +L G+D++ AQTGTGKT F LP L Sbjct: 274 TFEQAFRNYPDILVEIRKQNFEKPSPIQCQAWPILLSGKDMIGIAQTGTGKTLAFLLPAL 333 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ + R L++ PTRELA QI + V Y Y I+++ V+GG QM Sbjct: 334 IHIDNQDTPRSERSGPTVLVMAPTRELALQIEKEVNKY-YYHGIKAVCVYGGGDRKKQMN 392 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 + GV++++ATPGRL DL + + V LVLDEADRMLDMGF IR+ L + Sbjct: 393 IVSKGVEIVIATPGRLNDLIQTEVLDVKCVSYLVLDEADRMLDMGFEPQIRKSLLDIRPD 452 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 RQ ++ SAT+ ++ LAE + +P+ + V + A VTQ + VD++ K ++L Sbjct: 453 RQTVMTSATWPPGVRRLAESYMKSPITVCVGSLDLKAVHSVTQKIWIVDEEEKTDVLKDF 512 Query: 240 IGKGNW-QQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 +V+VF K + + L G+ +IHG + Q R +AL D K+GD+ + Sbjct: 513 FHNMAPSDKVIVFFGKKCKVDDIGSDLALSGVACQSIHGGREQADREQALEDIKTGDVNI 572 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 L+ATD+A+RG+DIE++ HV NY+ P E+YVHR+GRTGRA TGE++SLV + L + Sbjct: 573 LLATDVASRGIDIEDITHVFNYDFPRDIEEYVHRVGRTGRAGKTGESISLVTRRDWGLTK 632 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQ 401 ++ K+L++ IP S + E ++ R + G G + Sbjct: 633 ELIKILEEA--EQEIPTELYSMSERYEAMKKKRDEERGDGDRR 673 >UniRef50_UPI000186EE69 DEAD box ATP-dependent RNA helicase, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186EE69 Length = 610 Score = 557 bits (1436), Expect = e-157, Method: Composition-based stats. Identities = 144/392 (36%), Positives = 224/392 (57%), Gaps = 10/392 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF+ GL+ D++ V + Y PTPIQ Q P L G++++ A+TG+GKT GF LP + Sbjct: 202 SFEETGLADDVINIVRKLNYFAPTPIQSQGWPIALSGQNMVGIARTGSGKTLGFVLPAVI 261 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H+ + +G P+ AL+L PTREL Q +++ IRS+ V+GG Q Sbjct: 262 HIQHQPKLERGDGPI-ALVLAPTRELVQQTQNVAIPFARASGIRSVAVYGGSDKYGQDRH 320 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR G ++ VATPGRLLD + L++ LVLDEADRM DMGF IR ++ ++ R Sbjct: 321 LRNGTEICVATPGRLLDFLNSGTTNLERCTYLVLDEADRMFDMGFEPQIRSIIDQIRPDR 380 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTA-SDQVTQHVHFVDKKRKRELLSHMI 240 Q L++SAT+ +IK LAE+ L + +++ V + + + Q VH +R ++ L +++ Sbjct: 381 QVLMWSATWPKEIKRLAEEYLKDYIQLNVGSQELTANPNINQIVHVCQSERDKKKLQNVL 440 Query: 241 G---KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + + + L+FT TK ++ +A L G R ++HG K+Q R L G I+ Sbjct: 441 KEIGEQDEIKTLIFTATKQKSDSIAFWLQDLGYRCDSLHGGKTQKNRDFILR----GRIK 496 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVATD+AARGLD+ ++ +V+NY+ PN EDY+HRIGRTGR ATG + + + ++ Sbjct: 497 ILVATDVAARGLDVSDIRYVINYDYPNNMEDYIHRIGRTGRHNATGTSYTFLTDEDASKA 556 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQN 389 D+ +L++ + P E A P + Sbjct: 557 GDLISVLREANQNVD-PDLENLAMSAARPKKG 587 >UniRef50_Q8D2Y1 DeaD protein n=2 Tax=Enterobacteriaceae RepID=Q8D2Y1_WIGBR Length = 583 Score = 556 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 145/395 (36%), Positives = 230/395 (58%), Gaps = 7/395 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF LGL IL A+ + GY++P+PIQ++ IP +L+G D++ AQTG+GKTA F LPLL Sbjct: 6 LSFSELGLKDFILLALNDLGYKKPSPIQEKCIPFLLKGYDVLGIAQTGSGKTAAFFLPLL 65 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQM 119 ++ + + +ILTPTRELA QI SKY+ I + ++GG + + Q+ Sbjct: 66 NNIDLKLKL------PQIIILTPTRELALQIKFACCSLSKYIKEINIIALYGGQNYSIQI 119 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ ++V TPGR+LDL ++ + L ++ VLDEAD ML MGFI D+ + K Sbjct: 120 KSLKRNPQIVVGTPGRILDLLNKKYLNLSEITSFVLDEADEMLRMGFIEDVENIFLKSSK 179 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 + Q +LFSAT I + ++ + P EI + + Q+ V K E L Sbjct: 180 QHQTILFSATMPAAIHRITKRFMKKPKEIRIKASENTRPNIKQNYWIVYGLCKIEALLRF 239 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + V++F RTK+ +++ L K+G S++++G+ +Q R + L FK+G + +L Sbjct: 240 LEVEIFDAVIIFVRTKNATLEVSDVLEKNGYNSSSLNGDMNQILREKTLNRFKTGLLDIL 299 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD++ + V+NY++P E Y+HRIGRTGRA TG+AL V E K+L + Sbjct: 300 VATDVAARGLDVDRISLVINYDIPLDVESYIHRIGRTGRAGRTGKALMFVENRERKILYN 359 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQR 394 IE+ +K+++ +I +P E + + + Sbjct: 360 IERNIKEKLSQIKLPSVELLCKKRLNNFSEKIKNQ 394 >UniRef50_Q7K4L8 LD33749p n=15 Tax=Bilateria RepID=Q7K4L8_DROME Length = 703 Score = 556 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 141/394 (35%), Positives = 235/394 (59%), Gaps = 7/394 (1%) Query: 2 SFDS-LGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +F+ PD+L + + G+ +P+PIQ QA P +L+G D++ AQTGTGKT F LP + Sbjct: 283 TFEQCFAEYPDMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGM 342 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H + R L+L PTRELA QI V+ YS + ++++ V+GG + N Q+ Sbjct: 343 IHTEYQSTPRGTRGGANVLVLAPTRELALQIEMEVKKYS-FRGMKAVCVYGGGNRNMQIS 401 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L G ++++ TPGRL DL N + + + LVLDEADRMLDMGF IR+V+ + Sbjct: 402 DLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPD 461 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTAS-DQVTQHVHFV-DKKRKRELLSH 238 RQ ++ SAT+ ++ LA+ + NP+++ V + A+ V Q + + D K ++ Sbjct: 462 RQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITS 521 Query: 239 MIGKGN-WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + + ++++F K A+ L+ +L DG + IHGN+ Q R +A+AD KSG +R Sbjct: 522 FVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVR 581 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVATD+A+RGLDIE++ HV+NY+ P+ E+YVHR+GRTGRA G ++S ++ + Sbjct: 582 ILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTREDWAMA 641 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGR 391 +++ ++L++ +P + + + + +++ R Sbjct: 642 KELIEILQEA--EQEVPDELHNMARRFKAMKDKR 673 >UniRef50_B0TQ71 DEAD/DEAH box helicase domain protein n=31 Tax=Gammaproteobacteria RepID=B0TQ71_SHEHH Length = 437 Score = 556 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 210/400 (52%), Positives = 276/400 (69%), Gaps = 3/400 (0%) Query: 15 AVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRR 74 VA++GY++PT IQ +AIPA+L GRD+MASAQTGTGKTA FTLPLLQ LI + + + Sbjct: 39 VVAQKGYQQPTAIQAEAIPAILAGRDIMASAQTGTGKTAAFTLPLLQRLIDKSSSDEQSK 98 Query: 75 PVRA--LILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVAT 132 RA L+L PTRELA Q+ NV Y+ ++ S+V++GGVSI+ Q KL GVDV+VAT Sbjct: 99 AKRASVLVLAPTRELAVQVNTNVSQYAVNTDVSSIVIYGGVSIDAQATKLAAGVDVIVAT 158 Query: 133 PGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSD 192 PGRLLD + + L +E LV DEADRMLDMGF+ +I +L +LPAKRQ LLFSATFS Sbjct: 159 PGRLLDHVRRGTLNLSDIEYLVFDEADRMLDMGFMDEINAILKQLPAKRQTLLFSATFSS 218 Query: 193 DIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFT 252 I L++KLL PL IEV + N+A++ + Q V+ VD +RK ELL H+I K WQQVLVF+ Sbjct: 219 AIFELSKKLLQKPLRIEVDKANSAANSIEQVVYAVDSERKTELLCHLINKSAWQQVLVFS 278 Query: 253 RTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIE 312 R K A+ +A+++ GI + A HG+ QGAR + L DFK G I+ LVATD+AARGLDI Sbjct: 279 RKKQTADLIAQKMLAAGIEAKAFHGDLGQGAREQVLNDFKQGKIKALVATDVAARGLDIV 338 Query: 313 ELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIA 372 EL VVNYE+P V EDYVHRIGRTGRA TG+A++L D+ LL ++E ++ K +P+ Sbjct: 339 ELKVVVNYEIPFVAEDYVHRIGRTGRAGNTGKAITLYSEDDALLLEEVESVIDKRLPQQW 398 Query: 373 IPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRR 412 + G+EPD + K EP+ + R + G + RR Sbjct: 399 LEGFEPDLT-KLEPVTRKNSKAAQRQRAKKRALGADKRRR 437 >UniRef50_Q965K2 Putative uncharacterized protein n=3 Tax=Caenorhabditis RepID=Q965K2_CAEEL Length = 970 Score = 556 bits (1434), Expect = e-157, Method: Composition-based stats. Identities = 148/428 (34%), Positives = 236/428 (55%), Gaps = 7/428 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 ++ G++ ++ + + Y +PT IQ QAIP+++ GRD++ A+TG+GKT F LP+ + Sbjct: 305 TWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFR 364 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ + +G P+ A+IL PTRELA Q + ++K L ++ +GGV I+ Q+ Sbjct: 365 HILDQPELEEGDGPI-AVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIAD 423 Query: 122 LRGGVDVLVATPGRLLDLEHQ---NAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 L+ G +++V TPGR++D+ L +V LVLDEADRM D GF I +V+ + Sbjct: 424 LKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIR 483 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 +Q +LFSATF ++ALA K+L P+EI V ++ +TQ+ + +K L Sbjct: 484 PDKQTVLFSATFPRHMEALARKVLDKPVEILVGGKSVVCSDITQNAVICAEHQKFLKLLE 543 Query: 239 MIGKG-NWQQVLVFTRTKHGANHLAEQLNKDGIRSAA-IHGNKSQGARTRALADFKSGDI 296 ++G +VF + A+ + +QL + G S A +HG Q R ++ADFK+G I Sbjct: 544 LLGMYYEEGSSIVFVDKQEKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVI 603 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVD-EHK 355 +VLVAT +AARGLD++ L VVNY+ PN EDYVHR+GRTGRA G A + V + + K Sbjct: 604 KVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFVLPEHQEK 663 Query: 356 LLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG 415 + +I + + + K+E G++ + GG +G G + Sbjct: 664 MAGEICRAFETAGCKPPADLKAMFERFKSEMAAEGKEVKLGGKGFEGSGYKYDEGEAEAD 723 Query: 416 GAKSASAK 423 K + Sbjct: 724 ANKKRMTR 731 >UniRef50_Q7UJ92 Putative ATP-dependent RNA helicase rhlE n=1 Tax=Rhodopirellula baltica RepID=Q7UJ92_RHOBA Length = 485 Score = 556 bits (1433), Expect = e-157, Method: Composition-based stats. Identities = 203/481 (42%), Positives = 278/481 (57%), Gaps = 31/481 (6%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F+ LGL+ +L+ + + GY PTPIQ Q+IP +L+G D++ +AQTGTGKTA F LP+LQ Sbjct: 4 FEDLGLTGPLLQGLEQAGYETPTPIQAQSIPEILDGNDVLGAAQTGTGKTAAFALPILQI 63 Query: 63 L--ITRQPHAKGRRPVR--------ALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGG 112 + ++ +R L+L+PTREL+AQI N R Y K +RS V+FGG Sbjct: 64 MWEDDQERREPSKRRGGRPGRRPIRTLVLSPTRELSAQIEANFRIYGKKTRLRSTVIFGG 123 Query: 113 VSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRR 172 V+ NPQ+ +L+ GVD LVATPGRLLDL +Q + L VEILVLDEAD MLDMGF+ D++R Sbjct: 124 VNQNPQVRELQSGVDTLVATPGRLLDLVNQGFIDLKDVEILVLDEADHMLDMGFLPDVKR 183 Query: 173 VLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRK 232 +L LP RQNLLFSAT I+ LA+++L +P+ I++A + +++ Q + FV + K Sbjct: 184 ILKFLPRDRQNLLFSATMPGPIRKLADEILVDPVTIQIAPQKPTVERIEQSICFVAQADK 243 Query: 233 RELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFK 292 LL+H I LVFTRTKHGA+ +A +L K G+++AAIHGNK+Q R R L FK Sbjct: 244 PRLLNHFIETKATGSTLVFTRTKHGADAVARRLVKAGVKAAAIHGNKTQANRVRTLNKFK 303 Query: 293 SGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVD 352 + ++ VLVATD+AARG+DI+ + V+NY+ PN PE YVHRIGRTGRA GE + Sbjct: 304 NDELDVLVATDVAARGIDIDGIQTVINYDTPNTPEAYVHRIGRTGRAGREGETVMFCGGH 363 Query: 353 EHKLLRDIEKLLKKEIPRIA-IPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPR 411 E K IE+ +K +IP +PG +P P E + GG G G G + Sbjct: 364 ETKFFIAIEREIKLQIPVATGLPGCQPRPLQDPESGDKASSRSGGRSGGGGQSGGGRSRS 423 Query: 412 RGEGGAK--------------------SASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPA 451 S + S K G + R R +PA Sbjct: 424 GSGAQGGTGGGSKPGGRRRRGRAEGSVSGRGSTVGRKSAGSEAGKSGGSKNNRGRGGRPA 483 Query: 452 A 452 + Sbjct: 484 S 484 >UniRef50_C3RH47 ATP-dependent RNA helicase RhlE n=2 Tax=Bacteria RepID=C3RH47_9MOLU Length = 418 Score = 556 bits (1433), Expect = e-157, Method: Composition-based stats. Identities = 185/419 (44%), Positives = 265/419 (63%), Gaps = 1/419 (0%) Query: 19 QGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRA 78 Y P+PIQ+QAIPA++ GRD+ A+TGTGKTA F LP+LQ L R K R ++A Sbjct: 1 MKYDIPSPIQEQAIPAIISGRDIFGCAKTGTGKTAAFALPILQKLYLRDESEKYPRTIKA 60 Query: 79 LILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLD 138 LIL PTRELA QI E + +N++S V+FGGV Q+ K+ G+DVL+ATPGRL+D Sbjct: 61 LILAPTRELAIQINETFEAMNPQVNLKSAVIFGGVRQGSQVTKINRGIDVLIATPGRLID 120 Query: 139 LEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALA 198 L +Q V L VE LVLDEADRMLDMGFI DIR++L +P + Q +LFSAT D+IK L Sbjct: 121 LYNQGLVDLKHVEYLVLDEADRMLDMGFIKDIRKILRFIPRRHQTMLFSATLPDEIKHLV 180 Query: 199 EKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGA 258 LL++PL+I ++ N +++ Q ++FVDK K +LL ++ +VF RTK Sbjct: 181 SDLLNDPLKIMISSGNVTVEKINQSLYFVDKVNKAKLLIKLLENPQIYNAIVFVRTKRNV 240 Query: 259 NHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVV 318 + L ++L K I IHG+KSQ AR RAL +FK+ +RVLVA+DIAARG+DI+EL HV+ Sbjct: 241 DTLCKKLIKAQITCEGIHGDKSQNARVRALNNFKNDKVRVLVASDIAARGIDIDELTHVI 300 Query: 319 NYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEP 378 N++LP+ E+YVHRIGRT RA A+GEA++ E LL+DI+K + ++IP + P Y P Sbjct: 301 NFDLPDQAENYVHRIGRTARAGASGEAITFCSFQEKALLKDIQKFINQDIPVVDNPYY-P 359 Query: 379 DPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKP 437 + ++ +++G + + + +Q ++ + K ++ +P Sbjct: 360 MKDLSIPEKKHKSKKKGETQKSRDKAKHLKQGQKKLSVRTNNIKKNSKTKRSNFKRRRP 418 >UniRef50_A6DIU5 Probable ATP dependent RNA helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DIU5_9BACT Length = 537 Score = 556 bits (1433), Expect = e-157, Method: Composition-based stats. Identities = 148/388 (38%), Positives = 225/388 (57%), Gaps = 7/388 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEG-RDLMASAQTGTGKTAGFTLPLLQ 61 F +LGL P I + + +G++EP+PIQ+QAIP +L D++ AQTGTGKTA F LP++Q Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQ 63 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 + G + +ALIL PTRELA Q+ E ++ + K I ++ ++GG I Q Sbjct: 64 KI------EPGLKKPQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRA 117 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GVD++VATPGR + ++LD +E LVLDEAD ML+MGF+ D+ +VL P R Sbjct: 118 LKKGVDLVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASPDDR 177 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 L+FSAT +K +AE +HN + I+ + + Q V+ + K L ++ Sbjct: 178 TVLMFSATMPPRLKKIAESYMHNSITIKAKSETMTMETIDQVVYEAYPENKFAALCRIMD 237 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 ++F RTK ++ L +G + IHG+ +Q +R R L F++ +I +L+A Sbjct: 238 LEKDFYGIIFCRTKVEVEKVSAGLANEGYAADYIHGDVAQESRERLLKRFRNRNISLLIA 297 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARG+D+ +L H+VN+ LP E YVHRIGRTGRA TG A++L+ E + IE Sbjct: 298 TDVAARGIDVTDLSHIVNFSLPEQFESYVHRIGRTGRAGKTGTAITLITPKERSKMSFIE 357 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQN 389 K + R +P E ++ + + Sbjct: 358 KKTGAKTERRKLPFGEEMIKLRIQKLSK 385 >UniRef50_D1IXE3 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=8 Tax=Magnoliophyta RepID=D1IXE3_VITVI Length = 797 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 147/419 (35%), Positives = 228/419 (54%), Gaps = 19/419 (4%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 S+ LS ++L+AV GY+ P+PIQ AIP L+ RD++ A+TG+GKTA F LP+L Sbjct: 307 SWVESKLSTELLKAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLT 366 Query: 62 HLITRQPHAKGRR--PVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 ++ P ++ A+++ PTRELA QI + ++ YL I+ + + GG SI Q Sbjct: 367 YISRLPPMSEENEAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVVSIVGGQSIEEQG 426 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 ++R G +V++ATPGRL+D + L+Q +VLDEADRM+DMGF + VL +P+ Sbjct: 427 FRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPS 486 Query: 180 K-----------------RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQ 222 R +FSAT ++ LA K L NP+ + + A+D +TQ Sbjct: 487 SNLKPENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQ 546 Query: 223 HVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQG 282 HV + + K L ++ + + +VF TK A++LA+ L+K G R +HG KSQ Sbjct: 547 HVIMMKESEKMFKLQKLLDELGDKTAIVFINTKKSADNLAKGLDKAGYRVTTLHGGKSQE 606 Query: 283 ARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAAT 342 R +L F++ VLVATD+A RG+DI ++ HV+NY++P E Y HRIGRTGRA T Sbjct: 607 QREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKT 666 Query: 343 GEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQ 401 G A + + + + + D++++L + + + S R R + Sbjct: 667 GVATTFLTLHDSDVFYDLKQMLIQNNSPVPPELARHEASKFKPGAIPDRPPRRNDTESR 725 >UniRef50_A8TFK3 DEAD/DEAH box helicase domain protein n=1 Tax=Methanococcus voltae A3 RepID=A8TFK3_METVO Length = 584 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 153/387 (39%), Positives = 229/387 (59%), Gaps = 3/387 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGR-DLMASAQTGTGKTAGFTLPL 59 M F L +S I+ + E+G+ E T IQ++AIP VL+ D++ AQTGTGKT F +P+ Sbjct: 1 MEFRDLNISESIMERLDEKGFTEATQIQEKAIPIVLDTELDVVGQAQTGTGKTLAFGIPI 60 Query: 60 LQHLITR--QPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINP 117 +Q + + + K ++ V+A+ILTPTRELA Q+ + + +K +R V+GG SI Sbjct: 61 IQKIQEKIEENGRKNKKAVKAIILTPTRELALQVHDEIDSVNKGNKLRLCTVYGGQSIEK 120 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177 Q+ KLR GVD+++ TPGR++D + +KL++++ LVLDEAD ML++GFI D+ +++K Sbjct: 121 QINKLRNGVDIVIGTPGRVIDHLGRRTLKLNEIDFLVLDEADEMLNLGFIDDVEEIMSKC 180 Query: 178 PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 + LLFSAT I L E + I V + ++ Q + V + K ELL Sbjct: 181 KEDCRKLLFSATLPKSIMELVELHMGEYETIRVKSKALTTELTEQIYYEVKEHDKFELLR 240 Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 +I K LVF +TK + L +LN + S A+HG+ +Q R AL+ FKS I Sbjct: 241 RIIDKEPGFYGLVFCKTKADVDQLMRRLNDENYSSEALHGDMNQKQRELALSRFKSHKID 300 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +++ATD+AARG+DI EL HV+NY++P PE YVHRIGRTGRA G A++ V E + Sbjct: 301 IMIATDVAARGIDINELTHVINYDIPQNPEAYVHRIGRTGRAGNKGTAITFVEPREFRRF 360 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKA 384 + I K+ K + + IP + Sbjct: 361 KYIMKISKSDAKKEKIPDVTEIVELTK 387 >UniRef50_A8P4I3 ATP-dependent RNA helicase An3, putative n=2 Tax=Brugia malayi RepID=A8P4I3_BRUMA Length = 754 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 167/461 (36%), Positives = 245/461 (53%), Gaps = 18/461 (3%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F L L P I + GY PTP+Q+ +IP ++ RDLM+ AQTG+GKTA F +PL+ + Sbjct: 291 FADLKLHPWIEGNIRLSGYGRPTPVQKYSIPTLMNNRDLMSCAQTGSGKTAAFLVPLINN 350 Query: 63 LITRQPHA----------KGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGG 112 ++ P A + R+ ALIL+PTREL+ QI R ++ I S +++GG Sbjct: 351 VLQAGPEALYKSTTQQNGRRRQYPAALILSPTRELSLQIYNESRKFAYRTPITSALLYGG 410 Query: 113 -VSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIR 171 + Q+ KLR GV +L+ATPGRL+D+ Q + LD LVLDEADRMLDMGF IR Sbjct: 411 RENYREQINKLRLGVHILIATPGRLIDVMEQGLIGLDGCRFLVLDEADRMLDMGFEPQIR 470 Query: 172 RV--LTKLPAKRQ--NLLFSATFSDDIKALAEKL-LHNPLEIEVARRNTASDQVTQHVHF 226 ++ L+K+P K Q +FSATF +I+ LA+ + N + + V R + S+ + Q + + Sbjct: 471 QIVDLSKMPPKGQRVTAMFSATFPKEIQVLAQDFLMPNYVFLAVGRVGSTSENIMQKIVW 530 Query: 227 VDKKRKRELLSHMIGKGNWQ-QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGART 285 V++ K+ L ++ G LVF TK GA+ LA L KDG AIHG+ Q R Sbjct: 531 VEEHEKKSFLMDLLDAGEPSALTLVFVETKRGASDLAYYLQKDGYNVVAIHGDLKQFDRE 590 Query: 286 RALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEA 345 + L F+SG +LVAT +AARGLDI + HV+NY+LP+ ++YVHRIGRTGR G A Sbjct: 591 KHLETFRSGVATILVATAVAARGLDIPNVKHVINYDLPSDIDEYVHRIGRTGRVGNVGLA 650 Query: 346 LSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGR 405 S + RD+ +L+ + + E + + +GG G R Sbjct: 651 TSFFNDKNRNIARDLAELVVEANQELP-EWLEKISADAQRYGTRPGRAKGGSRFGGRDHR 709 Query: 406 GQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRR 446 Q G GG+ + + + + ++ Sbjct: 710 VQYTGGSGGGGSHRQNGINYSPSNNQWNQPQRTARAPPQQD 750 >UniRef50_UPI0001C33831 DNA/RNA helicase, superfamily II n=3 Tax=Cyanobacteria RepID=UPI0001C33831 Length = 477 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 162/400 (40%), Positives = 247/400 (61%), Gaps = 7/400 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF++LGLS + + E G+ PT IQ++AIP +LEG D++ +QTGTGKTA ++LP+L Sbjct: 3 ISFENLGLSETRVNKLKELGFENPTEIQEKAIPLMLEGHDVLGQSQTGTGKTAAYSLPIL 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + + + P V+ LILTPTRELA Q+ E ++D++ + L V+GG SI+ Q+ Sbjct: 63 EKVDIQDPS------VQVLILTPTRELAQQVAEALKDFTVRRRLYILTVYGGQSIDRQIR 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GV ++V TPGR++DL + + LD + VLDEAD ML MGFI D++ +L K P Sbjct: 117 SLERGVQIVVGTPGRVIDLIERKKLILDSLRWAVLDEADEMLSMGFIDDVKTILKKTPES 176 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK-RKRELLSHM 239 R FSAT +I+ L + L +P+ I V R A ++ Q+++ V + KR+ L + Sbjct: 177 RSTACFSATMPREIRELVNQFLKSPVTISVERTQAAPTRIEQNIYMVPRGWSKRKALQPV 236 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + + ++F RTK A+ L +L + G HGN SQ R R + F+ G I+++ Sbjct: 237 LEIEDPESAIIFVRTKQTASDLTTRLQEIGHCVDEYHGNLSQSQRERLVHRFRDGRIKLV 296 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARGLD+E L HV+NY+LP+ E Y+HRIGRTGRA TG+A+S+V + +++R Sbjct: 297 VATDIAARGLDVEGLSHVINYDLPDNSETYIHRIGRTGRAGKTGKAISIVESADRRMIRQ 356 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGR 399 IE+ L+++I IP + + +QN ++ G R Sbjct: 357 IERKLRQKIDICKIPNRSEVEAKRLGKLQNLIKESLIGER 396 >UniRef50_Q725W5 ATP-dependent RNA helicase, DEAD/DEAH family n=3 Tax=Desulfovibrio vulgaris RepID=Q725W5_DESVH Length = 532 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 166/386 (43%), Positives = 229/386 (59%), Gaps = 7/386 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF L L ++L+A+ E G+ EP+PIQ AIP +LEGRD++ AQTGTGKTA F LPLLQ Sbjct: 6 SFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQ 65 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMM 120 + R V+AL+L PTRELA Q+ + +K+L +R L V+GG I PQ Sbjct: 66 RIDA------ADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQAS 119 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR G V+V TPGR+LD ++ ++L V + VLDEAD MLDMGF DI R+L+++P Sbjct: 120 ALRRGAQVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMPEW 179 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q+ FSAT D I LA + L P + V RR Q V R+ + + + Sbjct: 180 VQSAFFSATMPDGILELARRFLREPELLRVTRRQLTVANTEQAWFEVRPFRRVDAVCRIF 239 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++ +VF TK G + LA L + GI + A+HG+ +Q R R ++ F++G I VLV Sbjct: 240 DAYIPRKAIVFRATKQGVDELAAALQQRGILADALHGDLNQTQRERVMSRFRAGGISVLV 299 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLD++++ V+N++LPN PE YVHRIGRTGRA TG A S + LRDI Sbjct: 300 ATDVAARGLDVDDVDTVINFDLPNDPETYVHRIGRTGRAGRTGRAFSFAAGRDVYKLRDI 359 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEP 386 +++ I R A+P + Sbjct: 360 QRVTGSRIDRRAMPTAADASRARTGQ 385 >UniRef50_Q8YXJ0 ATP-dependent RNA helicase n=24 Tax=Cyanobacteria RepID=Q8YXJ0_ANASP Length = 513 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 158/400 (39%), Positives = 242/400 (60%), Gaps = 7/400 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF LG+S + + + + G+ PT IQ QAIP +L GRD++ +QTGTGKTA F+LP+L Sbjct: 3 LSFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPIL 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 + L +Q + V+A++LTPTRELA Q+ + + + +R+L ++GG SI+ QM+ Sbjct: 63 ERLDPQQ------KAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQML 116 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L+ GV ++V TPGR++DL + +KLDQV+ VLDEAD ML MGFI D+ ++L++ P Sbjct: 117 QLKRGVHIVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQD 176 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK-RKRELLSHM 239 RQ LFSAT I+ L K L +P+ + V + +++ Q + + + K L + Sbjct: 177 RQTALFSATMPPSIRMLVNKFLRSPVTVTVEQPKATPNKINQVAYLIPRHWTKARALQPI 236 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + + L+F RT+ A L QL G HG+ SQ AR R L F+S +R + Sbjct: 237 LEMEDPETALIFVRTRRTAAELTSQLQAAGHSVDEYHGDLSQQARERLLTRFRSRQVRWV 296 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARGLD+++L HV+NY+LP+ E YVHRIGRTGRA G A++LV E + + Sbjct: 297 VATDIAARGLDVDQLSHVINYDLPDSVETYVHRIGRTGRAGKEGTAITLVQPFERRKQQI 356 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGR 399 E+ +++ ++IP + +Q ++ G R Sbjct: 357 FERHVRQNWQLLSIPTRAQIEARHILKLQEQVREALAGER 396 >UniRef50_Q2PZC2 Vasa protein n=16 Tax=Neoptera RepID=Q2PZC2_APIME Length = 630 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 156/383 (40%), Positives = 235/383 (61%), Gaps = 12/383 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF++ GL +L + + GY++PTP+Q+ A+P ++ GRDLMA AQTG+GKTA F +P++ Sbjct: 197 SFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACAQTGSGKTAAFAVPIIN 256 Query: 62 HLITRQP---HAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 L+ R + +I++PTREL QI + + +S ++++V +GG S+ Q Sbjct: 257 TLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNSILKTVVAYGGTSVMHQ 316 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTK-- 176 KL G +LVATPGRLLD + VK V+ LVLDEADRMLDMGF+ I +++ Sbjct: 317 RGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQFLVLDEADRMLDMGFLPSIEKMVDHET 376 Query: 177 -LP-AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRE 234 +P +RQ L+FSATF D+++ LA + L+N L + V A V Q+ + V + +K++ Sbjct: 377 MVPLGERQTLMFSATFPDEVQHLARRFLNNYLFLAVGIVGGACSDVEQNFYEVARNKKKD 436 Query: 235 LLSHMIGKGNW----QQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALAD 290 LL ++ + N LVF K A+ +A L+++ + +IHG++ Q R ALAD Sbjct: 437 LLKEILERENDSGTLGGTLVFVEMKKKADFIAVFLSENNYPTTSIHGDRLQRQREEALAD 496 Query: 291 FKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC 350 FKSG + +LVAT +AARGLDI+ + HV+NY+LP ++YVHRIGRTGR G A S Sbjct: 497 FKSGRMSILVATAVAARGLDIKNVSHVINYDLPKGIDEYVHRIGRTGRVGNRGRATSFFD 556 Query: 351 VDEHKLLR-DIEKLLKKEIPRIA 372 +E LR D+ ++LK+ + Sbjct: 557 PEEDAPLRGDLVRILKQANQSVP 579 >UniRef50_D1H3Q8 Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=14 Tax=Viridiplantae RepID=D1H3Q8_VITVI Length = 568 Score = 554 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 153/373 (41%), Positives = 229/373 (61%), Gaps = 11/373 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF +GL I++ + Y PT IQ QA+P L GRDL+ A+TG+GKTA F +P++Q Sbjct: 124 SFTDMGLHQSIMKDITFHEYTRPTFIQAQAMPVALSGRDLLGCAETGSGKTAAFAIPMIQ 183 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMM 120 H + + P +G AL+L PTRELA QI + V+ +S+ L+ R+ +V GG +I+ Q Sbjct: 184 HCLAQPPVRRGDG-PLALVLAPTRELAQQIEKEVKAFSRSLDSFRTAIVVGGTNISEQRS 242 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +LR GV+++VATPGR + + L ++ +VLDEADRMLDMGF IR V+ LP K Sbjct: 243 ELRAGVNIVVATPGRFIHHLQEGNTSLSRISFVVLDEADRMLDMGFEPQIREVMQNLPQK 302 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 Q LLFSAT +I+ LA++ L+NP++++V + + + V+Q + V + K + L ++ Sbjct: 303 HQTLLFSATMPMEIETLAQEYLNNPVQVKVGKVSCPTANVSQILEKVSESEKIDGLLALL 362 Query: 241 GKG---------NWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADF 291 + + +VF K + +AE L G+R+ A+HG +SQ R AL DF Sbjct: 363 VEEASQAERCGRPFPLTIVFVERKTRCDEVAEALVAQGLRAVALHGGRSQAEREAALRDF 422 Query: 292 KSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCV 351 ++G +LVATD+A+RGLD+ + HV+N +LP E+YVHRIGRTGRA +TG+A S Sbjct: 423 RNGATNILVATDVASRGLDVTGVAHVINLDLPKAMENYVHRIGRTGRAGSTGQATSFYTD 482 Query: 352 DEHKLLRDIEKLL 364 + L+ I K + Sbjct: 483 RDVFLVAHIRKAI 495 >UniRef50_C9DQK7 VASA DEAD-box protein n=5 Tax=Chordata RepID=C9DQK7_9ASCI Length = 851 Score = 554 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 168/417 (40%), Positives = 240/417 (57%), Gaps = 13/417 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF++ L I V Y PTP+Q+ ++P +L RDLMA AQTG+GKTA F LP+L Sbjct: 385 SFEAANLPETIAANVKRANYDSPTPVQKFSLPIILADRDLMACAQTGSGKTAAFLLPVLT 444 Query: 62 HLITRQPHAKG---RRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 +L+ + ++ +A+I+ PTREL QI R +S+ IR +V +GG S N Q Sbjct: 445 NLVRTGLASSSFSEKQLPQAIIVGPTRELVYQIYLEARKFSRGTIIRPVVAYGGTSTNYQ 504 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTK-- 176 + +L+ G +L+ATPGRL+D ++ + L V+ ++LDEADRMLDMGF +IR+++ Sbjct: 505 LKELQKGCHLLIATPGRLMDFINRGKIGLSSVQYIILDEADRMLDMGFETEIRKLVDSPG 564 Query: 177 LPA--KRQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKR 233 +PA +R L+FSATF D+I+ LA L + L + V R A VTQ V VD+ KR Sbjct: 565 MPAKNERHTLMFSATFPDEIQKLAHDFLREDFLFLTVGRIGGACSDVTQVVLQVDQGDKR 624 Query: 234 ELLSHMIGK--GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADF 291 L ++ + LVF TK A+ LA L ++G + +IHG++ Q R AL DF Sbjct: 625 NKLIELLADVADTGSRTLVFVETKRSADFLACSLCQEGYPTTSIHGDRLQQEREEALRDF 684 Query: 292 KSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCV 351 KSG +LVAT +AARGLDI ++ HVVNY+LP+ ++YVHRIGRTGR G A S Sbjct: 685 KSGKCPILVATSVAARGLDIPKVEHVVNYDLPSEVDEYVHRIGRTGRCGNLGRATSFYDD 744 Query: 352 D-EHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQ 407 L R + K+L I +P + + + A G+ + G GGR G + Sbjct: 745 SANASLARSLVKILADSIQE--VPSWLEECAESAVGTSFGKDRGGFGGRDTRRGNFK 799 >UniRef50_Q0K893 ATP-dependent RNA helicase n=129 Tax=Proteobacteria RepID=Q0K893_RALEH Length = 646 Score = 554 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 183/463 (39%), Positives = 249/463 (53%), Gaps = 18/463 (3%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +LGL ILRA++E Y PTP+Q QAIPA L GRDL+ S+QTG+GKTA F LP +Q Sbjct: 60 FATLGLDAAILRALSELNYNTPTPVQAQAIPAFLAGRDLLVSSQTGSGKTAAFMLPAIQR 119 Query: 63 LITRQ---------------PHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRS 106 + L+LTPTRELA Q+ E Y + L I Sbjct: 120 ISEMPAPQRATEPAKRMKGKRPRPSPAQPALLVLTPTRELALQVTEAAAKYGRNLRRIVC 179 Query: 107 LVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGF 166 + GG+ Q+ L D+LVATPGRLLD + L +++LV DEADRMLDMGF Sbjct: 180 ASILGGMPYPKQLAALAKMPDILVATPGRLLDHIDAGRIDLSALQMLVFDEADRMLDMGF 239 Query: 167 IHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHF 226 DI ++ PA RQ L+FSAT I LA + L +P IE+A + Q +HF Sbjct: 240 ADDIDAIVNATPATRQTLMFSATLDARIAQLASRQLRDPQRIEIAAARADQSHIEQRLHF 299 Query: 227 VDK-KRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGART 285 D K LL H++ +Q +VFT TK A+ LAE+L+ G + A+HG+ +QGAR Sbjct: 300 TDDMSHKERLLDHLLRDATLKQAIVFTATKRDADSLAERLSDTGFSAGALHGDMTQGARN 359 Query: 286 RALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEA 345 R L + G++RVLVATD+AARG+D+ ++ HVVN++LP EDYVHRIGRTGRA +G A Sbjct: 360 RTLTALRRGNLRVLVATDVAARGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGTA 419 Query: 346 LSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEP-IQNGRQQRGGGGRGQGGG 404 ++LV ++ + IE+ + I I G EP S K G RG GGG Sbjct: 420 INLVNHNDMFQWKRIERFTNQRIDASVIEGLEPRRSPKPRSNFGGKPGGGRGDFRGNGGG 479 Query: 405 RGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRP 447 + G+ ++ + G+++ G + RP Sbjct: 480 YRGGERSFGDRKFGGGESRTGFGERKFSGESRGFGNRPEGARP 522 >UniRef50_C9RIQ5 DEAD/DEAH box helicase domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RIQ5_FIBSS Length = 802 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 152/393 (38%), Positives = 234/393 (59%), Gaps = 7/393 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++FD LGLSP++L AV GY P+PIQ +AIPA+L+G +L+ +AQTGTGKTA F+LPLL Sbjct: 124 VTFDDLGLSPEVLEAVKLAGYETPSPIQAKAIPALLQGANLLGTAQTGTGKTAAFSLPLL 183 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYS-KYLNIRSLVVFGGVSINPQM 119 + R L+LTPTRELA Q+ + ++ Y+ K N+ + V+GG I Q+ Sbjct: 184 SRINFNG------RETSMLVLTPTRELAIQVSDAIQQYAVKMQNVTVVPVYGGQDIAIQL 237 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ ++VATPGRL+D + ++ L V+ +VLDEAD MLDMGF+ D+ +L ++PA Sbjct: 238 RALKRKASIVVATPGRLIDHIKRGSISLGAVKAIVLDEADEMLDMGFMEDVETILKEIPA 297 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 Q LFSAT D +K + ++ L E + + T + + Q V + K E L+ + Sbjct: 298 DAQRALFSATMPDSVKKIIDQHLGEYEEARIEGKTTTVENICQRYLLVKNEHKIEALARV 357 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + VL+F RTK +AE+L G A ++G+ +Q R R + K G + ++ Sbjct: 358 LEGEEFDGVLIFVRTKQNTTEVAEKLESRGFNVAPLNGDLAQSMRERTINRLKMGKLDIV 417 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+D++ + VVNY++P E YVHRIGRTGRA +G A+ + E ++L+ Sbjct: 418 VATDVAARGIDVDRISLVVNYDIPYDTESYVHRIGRTGRAGRSGNAILFITPREKRMLKT 477 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQ 392 IEK ++ I + +P E + + + + Sbjct: 478 IEKATRQPIDVMEMPTSEQISKKRVDAFKAKVK 510 >UniRef50_A9ENG9 ATP-independent RNA helicase n=18 Tax=Bacteria RepID=A9ENG9_SORC5 Length = 624 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 180/478 (37%), Positives = 254/478 (53%), Gaps = 30/478 (6%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF +LG++P +L +AE GY EPTPIQ++AIP +L GRDL+ A TGTGKTA F LPLLQ Sbjct: 9 SFAALGIAPALLGVLAELGYEEPTPIQREAIPHLLTGRDLLGQAATGTGKTAAFALPLLQ 68 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L + + R AL+L PTRELA Q+ E + Y + L ++ L V+GG Q+ Sbjct: 69 RL---EIGGEPPRLPEALVLVPTRELAMQVAEAMHRYGRRLGVQVLSVYGGQPFGQQLRA 125 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR GV V+VATPGR LD + + LD + +VLDEAD MLDMGF + +L+ P R Sbjct: 126 LRRGVHVVVATPGRTLDHIGRGTLALDGIRTVVLDEADEMLDMGFAEALEEILSATPGAR 185 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTAS---DQVTQHVHFVDKKRKRELLSH 238 Q +LFSAT I A+A + L P+ +++A A +V Q + V + K L+ Sbjct: 186 QTVLFSATLPPRIAAIAGRHLREPVRVKIAGEKAAPGELPRVRQTAYIVPRAHKSAALTR 245 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + ++F RT++ + L E L G + A+HG SQ R R +A F++G + Sbjct: 246 VLDMEDPSSAILFCRTRNEVDELTEALRARGYEAQALHGGFSQEHRDRVMARFRAGTAEL 305 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLDIE + HV+NY++P PE YVHRIGRTGRA G A++LV EH L+R Sbjct: 306 LVATDVAARGLDIEHVSHVINYDVPCAPEVYVHRIGRTGRAGREGAAITLVEPREHYLIR 365 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQG---------------- 402 ++E+L + I +P + + E + ++ G + Sbjct: 366 NVERLTGQRIEAATLPTVADLRARRLELTRASLREALIEGGAERFRVVVEGLADEFDVMD 425 Query: 403 --------GGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAA 452 + R E + P P R D P G R RP + A Sbjct: 426 IAAAAVKLAHDATEGDREEEEAEIPSFRPPPRGPERARDDRAPRGPAGARGRPGEAQA 483 >UniRef50_Q10MH8 DEAD-box ATP-dependent RNA helicase 24 n=10 Tax=Eukaryota RepID=RH24_ORYSJ Length = 770 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 151/394 (38%), Positives = 229/394 (58%), Gaps = 6/394 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF G ++ A+A+QGY +PT IQ QA+P VL GRD++ A+TG+GKTA F LP++ Sbjct: 220 SFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIV 279 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ + K P+ ++ PTRELA QI + ++K N+R V+GGVS Q + Sbjct: 280 HIMDQPELEKEEGPI-GVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKE 338 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G ++++ATPGRL+DL A+K+ + LVLDEADRM D+GF IR ++ ++ R Sbjct: 339 LKAGCEIVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDR 398 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK-RKRELLSHMI 240 Q LLFSAT ++ LA ++L +P+ + V + +A++ + Q V+ + K L + Sbjct: 399 QTLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKL 458 Query: 241 -GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 G + VLVF K + + QLN+ G R AA+HG+K Q +R L FKSG VL Sbjct: 459 PGMIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVL 518 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAA-ATGEALSLVCVDEHKLLR 358 VATD+AARGLDI+ + VVN+++ + ++HRIGRTGRA G A +L+ E + Sbjct: 519 VATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEVRFAG 578 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQ 392 ++ L +P D ++K + R Sbjct: 579 ELVHCLIAAGQ--DVPNELMDLAMKDGRFRANRD 610 >UniRef50_A9NFC3 DEAD box ATP-dependent RNA helicase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFC3_ACHLI Length = 547 Score = 553 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 153/471 (32%), Positives = 233/471 (49%), Gaps = 26/471 (5%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F+ L + A+ + G+ E TPIQ+QAIP ++ G DL+ AQTGTGKT F +P+++ Sbjct: 5 FNDLPILDTTKVALEKLGFTEATPIQEQAIPKMILGLDLIGQAQTGTGKTFAFGIPMVEK 64 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMMK 121 T R + LILTPTREL Q+ + + K+ +R + GG S Q + Sbjct: 65 TDT------SLRQTQGLILTPTRELTNQVYKEIIKLVKFYPELRVTTIVGGESYEKQFKE 118 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L ++VATPGR++D + V L + L LDEAD ML MGF DI R+L P R Sbjct: 119 LDRKPHIIVATPGRIIDHIDRGTVDLSHITTLTLDEADEMLKMGFQDDIERILQTTPETR 178 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q +LFSAT IK +A+ NP I++ ++ D++TQ V +K K+ LL ++ Sbjct: 179 QTVLFSATMPAFIKKIAKNYQKNPELIKIEAKSLTVDRITQAYFLVKEKEKQSLLERLLD 238 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 N ++F TK GA+ + E L K G + A+HG+ Q RT + F+S + +LVA Sbjct: 239 FENPSTAIIFVNTKAGADRITESLQKAGFTADALHGDLKQSQRTYVMNRFRSKQLSILVA 298 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLD++++ +VNY+LP E YVHRIGRTGRA G+A + V + ++L + Sbjct: 299 TDVAARGLDVDDVEIIVNYDLPQQDEIYVHRIGRTGRAGKKGKAFTFVTPLKRRMLDMLA 358 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQ-------------------QRGGGGRGQG 402 K +I R+ +P + + + ++ + G + Sbjct: 359 HYTKADIKRLEVPTADDVYKEQLKTFKHKIKTELANEYPNHLEAIKELLVDEGSKDQLLN 418 Query: 403 GGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAA 453 P + + A + S+ + R R PA Sbjct: 419 YLLDSMLPTKKTYETIEIIPEKASRRSQDERGNDKGRKDSRSSRDASPARG 469 >UniRef50_C1AE59 ATP-dependent RNA helicase RhlE n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AE59_GEMAT Length = 498 Score = 553 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 195/435 (44%), Positives = 275/435 (63%), Gaps = 7/435 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M+F SL L P + + + E G+ PTPIQ +AIP LEGRD++A A TG+GKT F LP+L Sbjct: 3 MTFSSLQLHPSLQQGLKELGFARPTPIQGEAIPPALEGRDVLACAMTGSGKTYAFLLPIL 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L+++ R RAL+LTPTRELAAQI E+++D + + + VFGGV + PQ Sbjct: 63 HQLMSKP-----RGNTRALVLTPTRELAAQILESLQDVTTHTPLTGAAVFGGVGMGPQEH 117 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP-A 179 R GVDV+VATPGRLLD Q KLDQ+E LVLDEADRMLDMGF+ +I+++L LP Sbjct: 118 AFRSGVDVIVATPGRLLDHFRQPYAKLDQLEYLVLDEADRMLDMGFLPEIKKILRHLPNR 177 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 KRQ L FSAT I AL +++L+ P+ + + R+ + +TQ V+ V ++ K LL + Sbjct: 178 KRQTLFFSATMPPPIAALTQEMLNKPVTLNLQRQAAPAKGITQAVYPVSQELKSALLVAL 237 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + +G+ Q LVFTRTKH AN LA QL GI++ IHGN+SQ RT+ALA FK G +VL Sbjct: 238 LKRGDMPQALVFTRTKHRANRLASQLVTAGIKAERIHGNRSQSQRTQALAGFKDGSYQVL 297 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATDIAARG+D+E L HVVN+++P EDY+HR+GRT RA ATGEA + V +E L+ Sbjct: 298 VATDIAARGIDVEALGHVVNFDVPVAAEDYIHRVGRTARAEATGEAFTFVSPEEEGELKL 357 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKS 419 IE+ +K+ +PR+ +P ++ + ++ +R R + + + + Sbjct: 358 IERAIKRALPRVTVPDFDYHAK-PTQKLEVPIAERIAEIRKKKAEDRARAAAKVARRTAA 416 Query: 420 ASAKPAEKPSRRLGD 434 ++ A K ++ Sbjct: 417 QESEAARKSAKDAKP 431 >UniRef50_Q17W71 ATP-dependent RNA helicase n=19 Tax=Helicobacter RepID=Q17W71_HELAH Length = 494 Score = 552 bits (1425), Expect = e-156, Method: Composition-based stats. Identities = 161/382 (42%), Positives = 237/382 (62%), Gaps = 7/382 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF+ LGL +L++V E G+ P+PIQ++AIPAVL+GRD++A AQTGTGKTA F LP++ Sbjct: 23 SFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPIIN 82 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 +L K + AL++TPTRELA QI + + K+ +++ V+GG S+ Q Sbjct: 83 NL-------KNNHTIEALVITPTRELAMQISDEIFKLGKHTKTKTVCVYGGQSVKKQCEF 135 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 ++ V++ATPGRLLD + + +++VLDE+D MLDMGF+ DI + LP++ Sbjct: 136 IKKNPQVMIATPGRLLDHLKNDRIHKFVPKVVVLDESDEMLDMGFLDDIEEIFDYLPSEA 195 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT + IK LA+K+L NP++I +A N + +TQ + +++ + E + H++ Sbjct: 196 QILLFSATMPEPIKKLADKILENPIKIHIAPSNITNTDITQRFYVINEHERSEAIMHLLD 255 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 ++ +VFTRTK A+ L + L +S A+HG+ Q R ++ FK D VLVA Sbjct: 256 TQAPEKSIVFTRTKKEADELHQFLISKNYKSTALHGDMDQRDRRASIMAFKKNDADVLVA 315 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+A+RGLDI + HV NY LP E Y+HRIGRTGRA G A++LV E+K L ++ Sbjct: 316 TDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITLVTPLEYKELLRMQ 375 Query: 362 KLLKKEIPRIAIPGYEPDPSIK 383 K + EI IP + IK Sbjct: 376 KEIDSEIELFEIPTINENQIIK 397 >UniRef50_Q15T34 DEAD/DEAH box helicase-like n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15T34_PSEA6 Length = 458 Score = 552 bits (1425), Expect = e-156, Method: Composition-based stats. Identities = 215/460 (46%), Positives = 282/460 (61%), Gaps = 16/460 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 MSF++LGL +++ A+A QGY T IQ++AIP VL DL+A AQTGTGKTA FTLPLL Sbjct: 1 MSFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q L +Q + VR+LI+TPTRELAAQ+ +V YS LNIRS V+GGV I PQ+ Sbjct: 61 QRLAAKQSTKV--QGVRSLIVTPTRELAAQVAISVEIYSTQLNIRSFAVYGGVRIEPQIA 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L+ GVDVL+ATPGRLLDL Q A+ + +EILV DEADRMLD+GFI D++R+ + LP K Sbjct: 119 QLQEGVDVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFIDDVKRIQSLLPVK 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSATFS IK A ++L+ P IEV+ N+ D V Q H +++ RK L +I Sbjct: 179 RQTLLFSATFSKQIKHFAREMLNAPKTIEVSAVNSTVDLVAQTFHPIEQARKSAALIQLI 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + W Q LVF RTK A+ L +L GI +A+IH N++Q ART+AL FK+G+I+VLV Sbjct: 239 QQHRWSQTLVFIRTKRTADALVTELEDAGIAAASIHANRTQHARTQALNAFKAGEIQVLV 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIAARG+D+ +LP VVNY+LP VPEDYVHRIGRTGRA TG A+SL DE L+ + Sbjct: 299 ATDIAARGIDVSQLPCVVNYDLPYVPEDYVHRIGRTGRAGNTGTAISLFSPDEISQLQSL 358 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420 E+ L + + + G+ P + N R + + Sbjct: 359 ERYLDQHLKPSTLVGFAPKDQVTKSWSANKANTRVNSAEKPTSRNMENTKHVKGKPPAAK 418 Query: 421 --------------SAKPAEKPSRRLGDAKPAGEQQRRRR 446 A P SR+ G ++ RR+ Sbjct: 419 LNIDDEDDELYGNFEADPHTSSSRKQHKGSAGGAKRSRRK 458 >UniRef50_B6IS62 DEAD/DEAH box helicase protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IS62_RHOCS Length = 528 Score = 552 bits (1425), Expect = e-156, Method: Composition-based stats. Identities = 193/483 (39%), Positives = 264/483 (54%), Gaps = 36/483 (7%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF LGL P +L+AV E G+ PTPIQQQA+PA L GRD++ASA TGTGKTA F LP L Sbjct: 8 VSFSDLGLLPHLLKAVEELGFTTPTPIQQQALPAALTGRDVVASANTGTGKTAAFVLPSL 67 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Q + T R L+LTPTRELA+Q+ E+VR+ SK+ I++ + GG+ Q+ Sbjct: 68 QRIATTARAEAAWG-PRVLVLTPTRELASQVLESVRNLSKFGRIQTGTILGGMPYRQQLE 126 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 LR VD++VATPGRL+D + + L VE+LVLDEADRMLDMGF + + PA+ Sbjct: 127 MLRRRVDLIVATPGRLMDHMERGRLDLSGVEVLVLDEADRMLDMGFREAVEFIAAACPAE 186 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLSHM 239 RQ LLF+AT + LA+ L +P+ I+VA + + QV Q D + K LL + Sbjct: 187 RQTLLFTATLDRTAERLAQTLTRDPVRIDVAGKAVVTAQVEQRWLRADGLEHKHRLLETL 246 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 +G + + +VF TK A+ LA+ L++ G ++ +HG+ Q R R + + G I V+ Sbjct: 247 LGGEEFGKGIVFIATKLDADRLADTLSEKGHKAMPLHGDMQQRDRNRVVQWLRDGRINVI 306 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARG+DI +L HV+N++LP EDYVHRIGRTGRA A+G + SL E + +R Sbjct: 307 VATDVAARGIDIADLTHVINFDLPKQAEDYVHRIGRTGRAGASGVSYSLFTRMEWRQVRA 366 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQ--------------------------NGRQQ 393 IE K +PG EP P + P R Sbjct: 367 IEAYTNKAADMHVLPGLEPMPEPERRPGGFNKGRPGGGKPGFKGRGFGGGNGGGGGYRGN 426 Query: 394 RGGGGRGQGGGRGQQQP--RRGEGGAKSASAKPAEKPSR------RLGDAKPAGEQQRRR 445 R G R G +P R +G A++P R +P GE+ R Sbjct: 427 RPWGERRDGERSFGDRPFGDRPQGDRPHGDRPHADRPHGERSFGDRPHGDRPQGERFRND 486 Query: 446 RPR 448 RPR Sbjct: 487 RPR 489 >UniRef50_B0U160 DEAD-box subfamily ATP-dependent helicase n=18 Tax=Francisella RepID=B0U160_FRAP2 Length = 581 Score = 552 bits (1424), Expect = e-156, Method: Composition-based stats. Identities = 160/477 (33%), Positives = 241/477 (50%), Gaps = 33/477 (6%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LGL+ DI+ V + GY PTPIQQ AIP +L GRD++ AQTGTGKTA F LPL+ + Sbjct: 9 FSQLGLNQDIIDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMK 121 + R + L+L PTRELA Q+ E + ++K + N+ ++GG Q+ Sbjct: 69 MD----LESRDRAPQVLVLAPTRELAIQVAEQFQAFAKNIPNLDVACIYGGQEYGSQIRA 124 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ GV V+V T GR++D + ++LD + LVLDEAD ML MGFI D+R VL+ + + Sbjct: 125 LKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVRYVLSHVSDEC 184 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT DI + ++ L NP +I+V + ++ VTQ + RK + L ++ Sbjct: 185 QRLLFSATIPTDIADIIQEYLRNPCKIQVKAKTKTANTVTQKFIVIKGFRKIDALDRLLE 244 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 V++F +TK +A+ L G R AAI+G+ Q R + F+S VLVA Sbjct: 245 VEETDGVIIFVKTKTSTIEVADNLKALGYRVAAINGDMQQSQREYIVDQFRSAKSDVLVA 304 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+ ARG+D+E + HV+NY++PN + YVHRIGRTGRA G ++SLV + E + LR +E Sbjct: 305 TDVVARGIDLERISHVINYDMPNDSDTYVHRIGRTGRAGREGISISLVPLKEMRFLRTLE 364 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRG--------------------- 400 + + + +P + + + + + Sbjct: 365 RFTGSPMQEVFMPSAKDLAQSRIDHFKTRIASALDKNKSLDNYKEIITSIRDELELDSDE 424 Query: 401 -------QGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKP 450 G+ PR + + + R G E++ R R Sbjct: 425 LLAVLTLLAQGKKSFFPREIQARDDRPQRDRNLRGNSRDGGRNDRFERRGDRSDRNS 481 >UniRef50_Q3AFI3 ATP-dependent RNA helicase, DEAD box family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFI3_CARHZ Length = 430 Score = 552 bits (1424), Expect = e-156, Method: Composition-based stats. Identities = 159/388 (40%), Positives = 234/388 (60%), Gaps = 7/388 (1%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F LGL +L+AV + G+ PTPIQ++AIP +LEG +L+ A TGTGKTA + LP+LQ Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + + + + LI+TPTRELA Q+ + V KYL +R+L V+GG +I Q+ L Sbjct: 64 I-------QRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGL 116 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 R GV+V+V TPGR+LD + +++I++LDEAD MLDMGFI DI +L L ++Q Sbjct: 117 RQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQ 176 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 LLFSAT IK + +K L +++ R + Q + + + K E L ++ Sbjct: 177 TLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGLVSILNS 236 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 Q +VF RTK + + EQLN G + +HG+ SQ RT+ + FK+G +LVAT Sbjct: 237 ELPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVAT 296 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARGLDI ++ HV+N+++P PE Y+HRIGRTGRA G+A++L+ E KLL+ IE+ Sbjct: 297 DVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEE 356 Query: 363 LLKKEIPRIAIPGYEPDPSIKAEPIQNG 390 + K + R +P + + I Sbjct: 357 AINKRLKREILPEPVDLEEARFKKIAKK 384 >UniRef50_C0ZI64 Putative ATP-dependent RNA helicase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI64_BREBN Length = 493 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 158/450 (35%), Positives = 259/450 (57%), Gaps = 12/450 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF S G P++++ + + Y+EPT IQ++AIP ++EG+DL+ AQTGTGKTA F LP+L Sbjct: 4 SFASFGFRPELMQGIQDLYYKEPTQIQEEAIPLIMEGKDLIGQAQTGTGKTAAFMLPILN 63 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 L +G+R ++ALILTPTREL+ QI + V K+LN+ L + GG I+ Q+ K Sbjct: 64 ALD------EGKRDIQALILTPTRELSIQIAKEVEKLGKHLNVNVLSLHGGTDIDKQLSK 117 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ V ++V TPGR+LD + ++ ++ LVLDEAD+M++MGF+ D+ +V+ P++R Sbjct: 118 LKETVQIVVGTPGRVLDHMKRGSLHFGRISTLVLDEADKMMEMGFLEDVEQVIVHTPSQR 177 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LLFSAT D +K LA + + P I++ + +++ Q + V++ K + L ++ Sbjct: 178 QVLLFSATMPDLVKKLAHRFMKQPPHIKIEGKQKTVERIEQFYYVVNQSDKTDALVDVLE 237 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 + +VF T+ L +L ++G+ + A++G+ SQ R + + F+ + L+A Sbjct: 238 QEQPFLTIVFANTQVRVQQLTARLQENGLSAKALYGDLSQNKREQLMKQFREIRFQFLIA 297 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TDIAARGLD+E + HV+NY+LPN + Y+HR+GRTGRA G+A+SL+ + L+ Sbjct: 298 TDIAARGLDVEGVTHVINYDLPNDVDSYIHRVGRTGRAGQKGKAISLISPRQKNLMARFA 357 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQ----RGGGGRGQGGGRGQQQPRRGEGGA 417 K K I + + + + + R + Q + ++ E Sbjct: 358 KATKASIEERILQEGRHLDAGRRQRAEEREAHFIELRAQQAKEQQKEKDKEFSPVREAIK 417 Query: 418 KSASAKPA--EKPSRRLGDAKPAGEQQRRR 445 K KP +K +R LGD + E+ R++ Sbjct: 418 KKTKVKPGYKKKMARELGDLQTQYEKNRKK 447 >UniRef50_Q5HME0 Probable DEAD-box ATP-dependent RNA helicase SERP1688 n=56 Tax=Staphylococcus RepID=Y1688_STAEQ Length = 509 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 149/478 (31%), Positives = 243/478 (50%), Gaps = 37/478 (7%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LG+S ++ + G++EPTPIQ+ +IP LEG D++ AQTGTGKT F +PL++ Sbjct: 3 NFKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGDDILGQAQTGTGKTGAFGIPLIE 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 ++ +Q V++LIL PTRELA Q+ E +R++SK ++ + VFGG+ I Q+ Sbjct: 63 KVVGQQ-------GVQSLILAPTRELAMQVAEQLREFSKGQKVQVVTVFGGMPIERQIKA 115 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP-AK 180 L+ G ++V TPGR++D ++ +K + L+LDEAD M++MGFI D+R ++ K+P + Sbjct: 116 LKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTLILDEADEMMNMGFIDDMRFIMDKIPAEQ 175 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ +LFSAT I+ L ++ + P I+ + Q+ ++ V + K + ++ + Sbjct: 176 RQTMLFSATMPKAIQELVQQFMKAPKIIKTMNNEMSDPQIDEYYTIVKELEKFDTFTNFL 235 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + +VF RTK + L L G ++ +HG+ +Q R L FK+ I +LV Sbjct: 236 DVHQPELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILV 295 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARGLDI + HV N+++P E Y HRIGRTGRA G A++ V E +R I Sbjct: 296 ATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQI 355 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRR-------- 412 E + + + + P + + + I++ Q R + + Sbjct: 356 EDVNNRRMKALRPPHRKEVLKAREDDIKDRVQNWMSRENEPRLQRISSELLKEYDSTELV 415 Query: 413 ---------------------GEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRK 449 K+ S+K + S + RR + K Sbjct: 416 ASLLQELVEANDEVEVQLTFEKPLARKNRSSKGGSRRSNHKRGNGKFDNKNRRSKGSK 473 >UniRef50_A8QAF6 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8QAF6_MALGO Length = 885 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 163/449 (36%), Positives = 246/449 (54%), Gaps = 10/449 (2%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 + GL + L + + GY PTPIQ QAIPA++ GRD++ A+TG+GKT F LP+ +H Sbjct: 255 WSHCGLPVNCLDVIKKLGYVAPTPIQSQAIPAIMSGRDMIGVAKTGSGKTMAFLLPMFRH 314 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 + ++P G PV AL++TPTRELA QI + + + + N+R +GG I+ Q+ ++ Sbjct: 315 VKDQRPVESGEGPV-ALVMTPTRELAVQIFRDAQPFLRAFNLRGACAYGGTPISEQIGEM 373 Query: 123 RGGVDVLVATPGRLLDLE---HQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 + V+V+VATPGR++DL + +V LVLDEADRM D+GF + ++L + Sbjct: 374 KKLVEVVVATPGRMIDLLTANSGRVTNMQRVTYLVLDEADRMFDLGFEPQVMKILGLIRP 433 Query: 180 KRQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 RQ +LFSATF +++LA K+L PLE+ V R+ + ++ Q V K L Sbjct: 434 DRQTVLFSATFPKPMESLARKMLRHEPLEVIVGGRSVVAAEIRQIVEVRPDSSKFHRLLE 493 Query: 239 MIGK----GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSG 294 ++G+ + L+F + A+ L L K G + ++HG K Q R LADFK+G Sbjct: 494 ILGQLYHHDEDARTLIFVDRQDAADELMHMLMKRGYPTMSLHGGKDQADRDTTLADFKAG 553 Query: 295 DIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEH 354 + +L AT +AARGLD+++L VVNY++PN EDYVHR GRTGRA G ++ + ++ Sbjct: 554 IVPILTATSVAARGLDVKQLKLVVNYDVPNHLEDYVHRAGRTGRAGNQGTCVTFITPEQD 613 Query: 355 KLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE 414 + +DI L+ P E S E +Q G+ G G G G + R Sbjct: 614 RYAKDIVAALRAS-KATVPPELEALASQFKEKLQQGKAHASGSGFGGRGLERLEASRERL 672 Query: 415 GGAKSASAKPAEKPSRRLGDAKPAGEQQR 443 A+++ E A+ A E QR Sbjct: 673 LQAQASIFIEDEDADPEAVAARAADETQR 701 >UniRef50_B0SYC6 DEAD/DEAH box helicase domain protein n=33 Tax=Alphaproteobacteria RepID=B0SYC6_CAUSK Length = 678 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 186/471 (39%), Positives = 258/471 (54%), Gaps = 23/471 (4%) Query: 1 MS-FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPL 59 M+ F LGLSP L+AVA+ GY TPIQ AIP L G+D++ AQTGTGKTA FTLPL Sbjct: 1 MTEFSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPL 60 Query: 60 LQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 + L+ + A R RAL++ PTRELA Q+ + Y+K + ++ GGVS Q Sbjct: 61 IDKLMNGRAKA---RMPRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQE 117 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 KL GVDVL+ATPGRLLD + + + V+ LV+DEADRMLDMGFI DI R+ P Sbjct: 118 KKLDRGVDVLIATPGRLLDHFERGKLLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTPP 177 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKR---KRELL 236 K+Q L FSAT +I L ++ L +P+ IE +R T ++ +TQ + V KR L Sbjct: 178 KKQTLFFSATMPPEITRLTKQFLKDPVRIEASRPATTNENITQLMVKVPSSDPKAKRLAL 237 Query: 237 SHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296 +I K + +VF K + +A+ L G +AAIHG+ Q RT+ LA F+ G + Sbjct: 238 RALIEKAQIETGIVFCNRKTEVDVVAKSLKSHGFDAAAIHGDLDQSQRTKTLAAFRDGSL 297 Query: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356 ++LVA+D+AARGLDI + HV NY++P+ +DYVHRIGRTGRA +G LV + K Sbjct: 298 KILVASDVAARGLDIPAVSHVFNYDVPHHADDYVHRIGRTGRAGRSGVTYMLVTPADDKG 357 Query: 357 LRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 + KL+ + + D S + G ++ GG R GG ++ R Sbjct: 358 FDKVVKLIGSTPTEEKL---DLDYSGAVTIKREGDKRGGGRDRAPRGGDRERGRDRDRNR 414 Query: 417 AKSA-------------SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454 A + + PA + + PA R R+PR AA+ Sbjct: 415 APTEPSDVAAANLEAAITGVPATPVASTVMSDPPAKRPARVRKPRGEKAAE 465 >UniRef50_B6YWR7 DEAD/DEAH box RNA helicase n=3 Tax=Thermococcus RepID=B6YWR7_THEON Length = 403 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 153/410 (37%), Positives = 229/410 (55%), Gaps = 9/410 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGR-DLMASAQTGTGKTAGFTLPL 59 MSF++LGLS L AV +G+ +PT IQ++ IP +L G D++ +QTGTGKTA F LP+ Sbjct: 1 MSFENLGLSEATLVAVRRKGFSQPTDIQKEVIPRLLSGDADIIGQSQTGTGKTAAFALPI 60 Query: 60 LQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 ++ + + + V+A+IL PTRELA Q+ + ++ + V+GG I PQ+ Sbjct: 61 IEAIDEK------EKSVQAIILAPTRELALQVADEIKSLRGRKRVYVYAVYGGQPIGPQI 114 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L G V+V TPGR+LD + + L +V+ +LDEADRMLDMGFI DI + + P Sbjct: 115 RALERGTHVVVGTPGRVLDHIRRGTLDLSKVKFFILDEADRMLDMGFIDDIEAIFRETPK 174 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 K++ L+FSAT +I LA + +++ I+V+ V Q V RK L + Sbjct: 175 KKRVLMFSATMPREILRLARRYMNDYEVIKVSSDELVPGMVEQEYIEVVPARKFSTLKKI 234 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + + +VF TK L+E+L K G + A++G+ SQ AR R FK+ R+L Sbjct: 235 LS--DDFYGIVFCATKRETRELSEKLRKQGYSAEALNGDMSQAARERTFWRFKTKRTRIL 292 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD++++ H+VNY LP EDYVHRIGRTGR G+A++ + E K LR Sbjct: 293 VATDVAARGLDVQDISHIVNYSLPMTAEDYVHRIGRTGRMGKKGKAVTFIMPGEFKRLRY 352 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQ 409 I + +I + + P + + Q+ GR ++ Sbjct: 353 IASVAGVDIQKSELSEELPREYHERYKREERPQRYRKNGRRDYSRGYSRR 402 >UniRef50_A9BJS7 DEAD/DEAH box helicase domain protein n=2 Tax=cellular organisms RepID=A9BJS7_PETMO Length = 530 Score = 551 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 153/403 (37%), Positives = 234/403 (58%), Gaps = 11/403 (2%) Query: 1 MS-FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRD-LMASAQTGTGKTAGFTLP 58 M+ F +GLS +IL A+ +GY PTPIQ++ IP +L G++ ++ AQTGTGKTA F +P Sbjct: 1 MTKFQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIP 60 Query: 59 LLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118 L++ L + V+AL+LTPTRELA Q+ + + L V+GGVSI Q Sbjct: 61 LIERLDEKA------NDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQ 114 Query: 119 MMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178 + L+ VD++V TPGR++D ++ + + +++ LV+DEAD MLDMGFI D+ +L+K Sbjct: 115 IRALKRRVDLVVGTPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIEDVEMILSKTN 174 Query: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEV---ARRNTASDQVTQHVHFVDKKRKREL 235 ++Q L+FSAT I LA K + N + + + + Q + + + K EL Sbjct: 175 KEKQILMFSATMPQRIVTLARKHMGNFETVTTVQENKEDITVKKAKQIYYMISESNKIEL 234 Query: 236 LSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295 LS +I LVFT+TK + +A +L K G + A++G+ SQ R R + FKS Sbjct: 235 LSRLIDIDTNFYGLVFTKTKVQSEEIANELIKKGYEAEALNGDVSQNQRERIMDRFKSKR 294 Query: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK 355 I++L++TD+AARG+DI+ L +V+NY LP PE+Y+HRIGRT RA G A++ V E++ Sbjct: 295 IKILISTDVAARGIDIDNLKYVINYSLPQNPENYIHRIGRTARAGNEGTAITFVTPTEYR 354 Query: 356 LLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGG 398 I+ K I IP + + K E I++ + Sbjct: 355 RFMFIKHSSKAIIEEAKIPQAKDIVNAKVEKIKDEIKSNLAKD 397 >UniRef50_A6KZW9 ATP-dependent RNA helicase n=51 Tax=Bacteria RepID=A6KZW9_BACV8 Length = 624 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 156/394 (39%), Positives = 239/394 (60%), Gaps = 8/394 (2%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVL-EGRDLMASAQTGTGKTAGFTLPLL 60 +F+ LG+SP+IL+A+ E GY P P+Q++ IP +L G D++A AQTGTGKTA F LPL+ Sbjct: 3 TFEELGVSPEILKAIKEMGYENPMPVQEEVIPYLLGNGNDVVALAQTGTGKTAAFGLPLI 62 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 Q + + R +ALIL PTREL QI ++ DYSKY+ ++ L V+GG SI Q+ Sbjct: 63 QKVDVK------HRAPQALILCPTRELCLQIAGDLNDYSKYIDGLKILPVYGGSSIESQI 116 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ GV ++VATPGRL+DL + KL+ + +V+DEAD ML+MGF I +L K+P Sbjct: 117 RMLKTGVHIIVATPGRLIDLIERKVAKLETITDVVMDEADEMLNMGFTDSINAILEKVPE 176 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 R L+FSAT S +I +A+K LH+ EI + +N S V + V K K L + Sbjct: 177 DRNTLMFSATMSPEISRIAKKYLHDAKEITIGTKNEGSKNVNHIAYLVHAKDKYAALKRI 236 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 ++F RT+ +A++L +DG + ++HG SQ R + F+ +++L Sbjct: 237 ADYYPQIYGIIFCRTRKETQEIADKLIQDGYNADSLHGELSQAQRDLVMQKFRQRHLQLL 296 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 VATD+AARGLD+ +L HV+NY LP+ E Y HR GRTGRA TG +++++ + E +R+ Sbjct: 297 VATDVAARGLDVNDLTHVINYGLPDDIESYTHRSGRTGRAGKTGISIAIINLREKGKMRE 356 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQ 393 IE+++ K+ +P + + + + ++ Sbjct: 357 IERIINKKFIMGEMPSGKQICEQQLIKLIDDIEK 390 >UniRef50_B4PSL1 GE25850 n=3 Tax=Sophophora RepID=B4PSL1_DROYA Length = 688 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 141/394 (35%), Positives = 230/394 (58%), Gaps = 7/394 (1%) Query: 2 SFDS-LGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +F+ PD+L + + G+ +P+PIQ QA P +L+G D++ AQTGTGKT F LP + Sbjct: 268 TFEQCFAEYPDLLGEITKMGFPKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGM 327 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H + R L+L PTRELA QI V+ YS + N++++ V+GG Q+ Sbjct: 328 IHTEYQSTPRGTRGGANVLVLAPTRELALQIEMEVKKYS-FRNMKAVCVYGGGDRRMQIS 386 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L G ++++ TPGRL DL N + + + LVLDEADRMLDMGF IR+V+ + Sbjct: 387 DLERGAEIIICTPGRLNDLVQANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPD 446 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTAS-DQVTQHVHFV-DKKRKRELLSH 238 RQ ++ SAT+ ++ LA+ + NP+++ V + A+ V Q + + D + K + Sbjct: 447 RQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQVIQLLEDDREKFSTIKS 506 Query: 239 MIGKG-NWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 + N ++++F K A+ L+ L DG + IHGN+ Q R +A+AD KSG + Sbjct: 507 FVRNMSNTDKIIIFCGRKARADDLSSDLTLDGFMTQCIHGNRDQSDREQAIADIKSGAVH 566 Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 +LVATD+A+RGLDIE++ HV+NY+ P E+YVHR+GRTGRA G ++S + ++ + Sbjct: 567 ILVATDVASRGLDIEDITHVINYDFPRNIEEYVHRVGRTGRAGRKGTSISFITREDWGMA 626 Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGR 391 +++ +L++ +P + + + + ++ R Sbjct: 627 KELIDILQEA--EQEVPDELHNMARRFKAMKEKR 658 >UniRef50_A2ED04 DEAD/DEAH box helicase family protein n=1 Tax=Trichomonas vaginalis RepID=A2ED04_TRIVA Length = 521 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 136/405 (33%), Positives = 220/405 (54%), Gaps = 3/405 (0%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+ L L +I+ + E + PTPIQ +IP L+G D++ A+TG+GKTA F +P L Sbjct: 85 VTFEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKGNDMVGIAKTGSGKTASFLIPAL 144 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 H+ ++ ++ P+ L+L+PTRELA Q E + + + + ++GG + Q+ Sbjct: 145 MHISAQRKISENDGPI-VLVLSPTRELALQTDEVAAQFCVKMGYKHVCIYGGEDRHRQIN 203 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KLR +++ ATPGRL+D ++ LVLDEADRMLDMGF IR ++ L Sbjct: 204 KLRFHPEIVTATPGRLIDFLQSGVFNPNRANFLVLDEADRMLDMGFEPQIRAIIASLTKD 263 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSHM 239 R+ +FSAT+ +I+ LA L NP+ + V ++++ Q+V + + K E + Sbjct: 264 RETFMFSATWPKEIRQLASDFLSNPIHMHVGGEELATNERIQQNVLLLQEHEKGEKCVEI 323 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI-RV 298 + + +++++F +TK L++ L IR +IHG+K+Q R AL FK+ V Sbjct: 324 LKENQSKKIIIFAKTKRTVQQLSDFLKSKSIRCLSIHGDKTQQERVVALDKFKNARTGGV 383 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 LVATD+AARGLD+ ++ V+NY+ P EDYVHRIGRT R TG A++ + L Sbjct: 384 LVATDVAARGLDVTDIDLVLNYDFPGDIEDYVHRIGRTARGEKTGVAITFFTDENRFLAS 443 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGG 403 D+ +++K + Q+ ++ R G Sbjct: 444 DLVEVIKNSAQVPPDWLSAMAVHVTKSDGQSITAKKVYNPRDGNG 488 >UniRef50_C8PWG8 Cold-shock DEAD box protein A homolog n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWG8_9GAMM Length = 777 Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 177/466 (37%), Positives = 257/466 (55%), Gaps = 18/466 (3%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +LGLS +L+++ GY PTPIQ +AIPA LEGRDL+ SAQTG+GKTA F LP+L Sbjct: 71 FTALGLSGSLLKSIVATGYTTPTPIQARAIPAALEGRDLLLSAQTGSGKTAAFVLPILHQ 130 Query: 63 LITRQPHAKG-------------RRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLV 108 L Q K + V+ALILTPTRELA Q+ +++R Y + ++ S+ Sbjct: 131 LSELQAKEKAAEKTASGKRGRQQPKVVQALILTPTRELANQVQDSIRKYGSAMKDLYSVP 190 Query: 109 VFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIH 168 + GG + + Q+ L+ GV ++VATPGRLLD + V L + +LVLDEADRMLDMGF Sbjct: 191 LVGGAAYSGQIRALKKGVQIIVATPGRLLDHINAQRVNLSDLTMLVLDEADRMLDMGFAD 250 Query: 169 DIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVD 228 DI +L PA RQ ++ SAT+ + +AE +P I + + + + V+F D Sbjct: 251 DINAILEATPAHRQTIMSSATWDGPVGKIAESFTKDPERINI---KVETAHIDEKVYFCD 307 Query: 229 K-KRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRA 287 K +LL +I Q ++FT TK + +AE+L + ++ +HG+ Q R R Sbjct: 308 NFDHKNKLLEQLICDPERGQAIIFTATKRSSEEVAERLQQWDHKACYLHGDLPQSKRNRI 367 Query: 288 LADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALS 347 ++D +SG ++VATD+AARGLD+ + HV NY+LP EDYVHRIGR+GRA TG A++ Sbjct: 368 VSDLRSGKFDIVVATDVAARGLDLPNITHVFNYDLPRQVEDYVHRIGRSGRAGRTGIAIN 427 Query: 348 LVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQ 407 L D+ + +I + LK++I + G EP K E + G G G Sbjct: 428 LCSRDDRRQFGNIARYLKRDINEAQVEGLEPRFVEKFEGRGKPNGRDGRGRGRSGSDSRG 487 Query: 408 QQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAA 453 + RG + A + RR D Q+R +P ++ Sbjct: 488 GRDDRGSRSQRFAGSSDRPSSERRFADKPRFDNQERYGKPASNDSS 533 >UniRef50_D1B384 DEAD/DEAH box helicase domain protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B384_SULD5 Length = 436 Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 196/413 (47%), Positives = 266/413 (64%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F+ LGLS I AV E GY +PTP+Q + IP VLEG+D+MA+AQTGTGKTA + LPLL Sbjct: 1 MVFEKLGLSEPIRDAVRELGYTKPTPVQNKVIPLVLEGKDVMATAQTGTGKTAAYALPLL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L + + + VRALIL PTRELA+Q+G +V+ Y K + + S ++GGV PQ Sbjct: 61 HILNKKTQKSTTSKVVRALILVPTRELASQVGASVQAYGKNVPLSSAAIYGGVKFTPQAK 120 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 KL G+D+L+ATPGRLL+ V L +VEI+V DEADR+LDMGF +++ +L P K Sbjct: 121 KLDKGIDILIATPGRLLEHVKLGNVDLSRVEIVVFDEADRILDMGFWDEVQTLLGLFPKK 180 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFS S +K L+E L P+ + + + + +V Q ++ VDK+RK ELLS MI Sbjct: 181 RQTLLFSVGLSKSVKRLSEVSLKKPVTVAINNQGDFAKKVEQTLYLVDKERKCELLSFMI 240 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 G NW QVLVFT+TK A+ + E LN G+++ +HG+K+ RT+A+ FK IRVLV Sbjct: 241 GTHNWHQVLVFTKTKQSADEVGEYLNASGLKTLVLHGDKAHSKRTQAIHAFKENAIRVLV 300 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATDIA+RGLDIE+LP+V+NYELP EDY HR GRTGRA G A+SLV +E ++I Sbjct: 301 ATDIASRGLDIEDLPYVINYELPGDAEDYTHRAGRTGRAGKEGRAISLVAQEEKNKFKEI 360 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRG 413 EK+LK I PG+E ++ E ++ Q + + G ++ R Sbjct: 361 EKILKYTIKTEFYPGFETKEWVEKEAKKHTIQAKIDREKANKRPNGLRKKREE 413 >UniRef50_UPI0001C311D7 DEAD/DEAH box helicase domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C311D7 Length = 481 Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 150/411 (36%), Positives = 228/411 (55%), Gaps = 6/411 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F LGLS +L A+ + GY P+PIQ+QAIP +L G D++ AQTG+GKTA F LPL++ Sbjct: 3 TFADLGLSAPVLEALRDVGYENPSPIQEQAIPPLLAGNDMIGQAQTGSGKTAAFGLPLME 62 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 ++ R V+AL+LTPTREL Q+ + +R Y I + VFGG I Q + Sbjct: 63 YVD------PSDRDVQALVLTPTRELCIQVTQALRSYGARKGIDVVAVFGGAPIRSQQAQ 116 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 LR G ++V T GR+ DL ++++ L +VLDEAD MLD+GF+ D+ ++L P R Sbjct: 117 LRAGGQIVVGTVGRVKDLISRHSLMLHGTRFVVLDEADEMLDLGFLEDVEKILALTPGSR 176 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG 241 Q LFSAT +I+ L+E+ L+NP+ ++V D V Q + ++ K ++L ++ Sbjct: 177 QTALFSATMPPEIRKLSERYLYNPVHVKVRAATLTVDTVEQFSLEMSQRDKPDMLGTVLE 236 Query: 242 KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVA 301 Q +VF RTK + L L G+ A+HG+ SQG R + FKSG + +LVA Sbjct: 237 SEKPDQAIVFVRTKIRCDQLYRTLRDRGMNVKALHGDMSQGQRDGVMLSFKSGRLPILVA 296 Query: 302 TDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE 361 TD+AARGLDI + HVVN+++P P+ YVHRIGRTGR +G A++ + + + IE Sbjct: 297 TDVAARGLDISSVTHVVNFDVPTSPDVYVHRIGRTGRVGRSGRAITFYDSKQKRDIEAIE 356 Query: 362 KLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRR 412 + + + ++ +P ++ + R Sbjct: 357 RHTRTPMAPWTAGARVAALRVEVKPKRHESKPHDAAPTNGDRAATDGARTR 407 >UniRef50_A1B2U6 DEAD/DEAH box helicase domain protein n=23 Tax=Rhodobacterales RepID=A1B2U6_PARDP Length = 479 Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 191/414 (46%), Positives = 258/414 (62%), Gaps = 3/414 (0%) Query: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 F +G+ + + G P+PIQ+++IP ++ GRDL+ AQTGTGKTA F LP+L Sbjct: 69 FTRMGIDARVAINLPGLGIETPSPIQEKSIPGIVAGRDLLGLAQTGTGKTAAFGLPMLTR 128 Query: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122 L+ R RALIL PTRELA QI EN+ +Y+ IR V GG SIN Q+ +L Sbjct: 129 LL-NIGRKPEPRTCRALILAPTRELATQIAENIDNYAIGTPIRQFRVVGGASINVQVQRL 187 Query: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182 GVDVL+ATPGRL+DL + A+ L Q LVLDEAD+MLD+GFIH +RR+ LP +RQ Sbjct: 188 ERGVDVLIATPGRLIDLIERGAIDLSQTRYLVLDEADQMLDIGFIHALRRIAKMLPRERQ 247 Query: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242 LLFSAT ++ LA+ L++PL + V A++++ Q VHFV++ K LL+ + K Sbjct: 248 TLLFSATMPKLMEELADSYLNDPLRVAVNPPGQAAEKIDQGVHFVNQGDKATLLAEYLSK 307 Query: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302 + +VF RTKHG+ L + L+K G + AAIHGNKSQG R RALA F++G+ +VLVAT Sbjct: 308 HVDELAIVFGRTKHGSEKLCKLLDKWGFKVAAIHGNKSQGQRERALASFRAGETKVLVAT 367 Query: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362 D+AARGLDI ++ HV NY+LPNVPE+YVHRIGRT RA G A++ E LR IEK Sbjct: 368 DVAARGLDIPQVAHVYNYDLPNVPENYVHRIGRTARAGRDGRAIAFCSPTEIGELRAIEK 427 Query: 363 LLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGG 416 +K +I + G EP + K + G R + R + P+ + Sbjct: 428 AMKAKI--AVVGGEEPFEAAKIRERGGPAGRPAQGARKRPARRPSRAPKTAQRA 479 >UniRef50_Q26696 Putative DEAD-box RNA helicase HEL64 n=7 Tax=Trypanosomatidae RepID=DDX17_TRYBB Length = 568 Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 160/448 (35%), Positives = 235/448 (52%), Gaps = 10/448 (2%) Query: 2 SFDSLG--LSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPL 59 SFD L + P +L+ + Q + PTP+Q Q+ P +L GRDL+ A+TG+GKT GF +P Sbjct: 101 SFDHLCGIVPPYLLKKLTAQNFTAPTPVQAQSWPVLLSGRDLVGVAKTGSGKTLGFMVPA 160 Query: 60 LQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 L H+ ++P G ++L PTRELA QI E + ++ V+GG PQ+ Sbjct: 161 LAHIAVQEPLRSGDG-PMVVVLAPTRELAQQIEEETKKVIPG-DVYCGCVYGGAPKGPQL 218 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 LR GV +LVATPGRL+D + L +V LVLDEADRMLDMGF +R++ ++ Sbjct: 219 GLLRRGVHILVATPGRLIDFLDIKRINLHRVTYLVLDEADRMLDMGFEPQVRKICGQIRP 278 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFVDKKRKRELLSH 238 RQ ++FSAT+ +I+ LA + + I V A+ VTQ + K++ L Sbjct: 279 DRQTVMFSATWPREIQRLAAEFQKQWIRISVGSTELQANKDVTQRFILTQEFAKQDELRK 338 Query: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 ++ + ++VLVF + K A+ L QL + G + AIHG+K Q R LA F+ Sbjct: 339 LMQEHREERVLVFCKMKRTADELERQLRRWGYDAMAIHGDKEQRQREFILARFRKDPRLC 398 Query: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL-- 356 LVATD+AARGLDI++L V+NY+ P +DYVHRIGRTGRA G + L+ E ++ Sbjct: 399 LVATDVAARGLDIKQLETVINYDFPMQIDDYVHRIGRTGRAGGEGRCVYLITKKEAQITP 458 Query: 357 --LRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGG-RGQGGGRGQQQPRRG 413 L+++ +L++ I E + ++ R G G + R +P Sbjct: 459 SVLKELIGILERAQQEIPDWMIEWNAQQPRYQVKRNRGMNGFGRHQSAPFLRNGHRPSFS 518 Query: 414 EGGAKSASAKPAEKPSRRLGDAKPAGEQ 441 G SA + DA P Sbjct: 519 ANGNYSAHGNGTFGLGKHNDDAVPFSSS 546 >UniRef50_A0KXT6 DEAD/DEAH box helicase domain protein n=61 Tax=Gammaproteobacteria RepID=A0KXT6_SHESA Length = 491 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 205/468 (43%), Positives = 278/468 (59%), Gaps = 17/468 (3%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F LGL +++AV E GY PTPIQ +AIP++L G++++A+AQTGTGKTA F LPLL Sbjct: 1 MPFSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLL 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 R VRA+ILTPTRELA Q+ EN+ Y+KYL + ++ ++GGV PQ Sbjct: 61 HRFADAPKIRPKR--VRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKK 118 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 +L GVD+LVATPGRLLD+ Q A++ D+V +LVLDEADRMLDMGFI DI ++ KLP + Sbjct: 119 RLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPEQ 178 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQNLLFSAT S +KALA+ + + +EIE++R++ AS + Q + VDK +K LLSH+I Sbjct: 179 RQNLLFSATLSKQVKALAKSAIPDAIEIEISRKSAASTHIDQWLTTVDKDKKSALLSHLI 238 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 + NW Q L+F +TKHGA L QL K GI + A H +SQ R + L DFK+G + LV Sbjct: 239 QEQNWSQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAVREQLLIDFKAGKVSFLV 298 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 AT +A+RG+DI+ L V+NY+LP+ +DY+HRIGRTGRA GEA+S V D+ + L I Sbjct: 299 ATGVASRGIDIDALARVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLCAI 358 Query: 361 EKLLKKEIPRIAIPGYEP-------DPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRG 413 E+ L I R I G+EP + ++ R + G Sbjct: 359 ERRLGHVIVRREIAGFEPKKVVPISILDFVPKSASKTERKPNSPAETNLQSRPYSSGKPG 418 Query: 414 EGGAKSASAKPAEKPSRRLGDAKPAGEQQRR--------RRPRKPAAA 453 A A + K + K + + RP P Sbjct: 419 TFEATQAKKHRSAKAAPAPKAQKTGTDSRSDTHSGARSNSRPANPLQG 466 >UniRef50_Q9NQI0 Probable ATP-dependent RNA helicase DDX4 n=53 Tax=Coelomata RepID=DDX4_HUMAN Length = 724 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 156/446 (34%), Positives = 252/446 (56%), Gaps = 18/446 (4%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F+ L + +A+ GY + TP+Q+ +IP +L GRDLMA AQTG+GKTA F LP+L Sbjct: 288 LTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPIL 347 Query: 61 QHLITRQPHAKGRRP---VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINP 117 H++ A + +I+ PTREL QI R +S +R++V++GG + Sbjct: 348 AHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGH 407 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTK- 176 + ++ G ++L ATPGRL+D+ + + L Q++ LVLDEADRMLDMGF +++++++ Sbjct: 408 SIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCP 467 Query: 177 -LP--AKRQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKKRK 232 +P +RQ L+FSATF ++I+ LA + L N L + V + A V Q V V + K Sbjct: 468 GMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSK 527 Query: 233 RELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFK 292 RE L ++ ++ +VF TK A+ +A L ++ I + +IHG++ Q R +AL DF+ Sbjct: 528 REKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFR 587 Query: 293 SGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC-V 351 G VLVAT +AARGLDIE + HV+N++LP+ ++YVHRIGRTGR TG A+S Sbjct: 588 FGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLE 647 Query: 352 DEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPR 411 ++ L + + K+L + +P + + + G G +G R Sbjct: 648 SDNHLAQPLVKVLTDA--QQDVPAWLEEIAFST-------YIPGFSGSTRGNVFASVDTR 698 Query: 412 RGEGGAKSASAKPAEKPSRRLGDAKP 437 +G+ +A ++ P+ ++ Sbjct: 699 KGKSTLNTAGFSSSQAPNPVDDESWD 724 >UniRef50_O22907 DEAD-box ATP-dependent RNA helicase 24 n=4 Tax=Embryophyta RepID=RH24_ARATH Length = 760 Score = 550 bits (1418), Expect = e-155, Method: Composition-based stats. Identities = 144/388 (37%), Positives = 219/388 (56%), Gaps = 4/388 (1%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 +F+ G S I+ A+ +Q Y +PT IQ QA+P VL GRD++ A+TG+GKTA F LP++ Sbjct: 229 TFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIV 288 Query: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121 H++ + + P+ +I PTRELA QI + +SK +R V+GG+S + Q + Sbjct: 289 HIMDQPELQRDEGPI-GVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKE 347 Query: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181 L+ G +++VATPGRL+D+ A+ + + LVLDEADRM D+GF +R ++ ++ R Sbjct: 348 LKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDR 407 Query: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKK-RKRELLSHMI 240 Q LLFSAT ++ LA ++L +P+ + V A++ +TQ V+ + K L + Sbjct: 408 QTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKL 467 Query: 241 -GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 G + VLVF K + + QL + + AA+HG+K Q +R L FKSG VL Sbjct: 468 PGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVL 527 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAA-ATGEALSLVCVDEHKLLR 358 +ATD+AARGLDI+ L VVNY++ + +VHRIGRTGRA G A +LV E + Sbjct: 528 IATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAG 587 Query: 359 DIEKLLKKEIPRIAIPGYEPDPSIKAEP 386 ++ L + + Sbjct: 588 ELVNSLVAAGQNVPPELTDLAMKDGRFK 615 >UniRef50_A7VM16 Vasa-related protein n=5 Tax=Eumetazoa RepID=A7VM16_9ANNE Length = 990 Score = 549 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 160/453 (35%), Positives = 255/453 (56%), Gaps = 18/453 (3%) Query: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 SF + S I+ + + Y +PTPIQ+ A+P ++ GRD+M AQTG+GKTA F LP+L Sbjct: 518 SFTEVKFSDVIMTNLRKTKYEKPTPIQKWAVPVIISGRDMMGCAQTGSGKTASFLLPMLT 577 Query: 62 HLI----TRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINP 117 ++ G L+L PTREL QI R +S +R++V +GGVS + Sbjct: 578 KMLGTGFEPPCVEDGCAMPLMLVLAPTRELVLQIFHETRKFSFDTVVRAVVAYGGVSSSY 637 Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTK- 176 Q ++ G +++ATPGRL+D + + L +++ LVLDE DRMLDMGF I +L++ Sbjct: 638 QEKEILKGAHIVIATPGRLIDFFGKKRINLCKLKYLVLDEVDRMLDMGFHTAIASILSQG 697 Query: 177 ---LPA--KRQNLLFSATFSDDIKALAEKLLH-NPLEIEVARRNTASDQVTQHVHFVDKK 230 +P+ RQ ++FSAT ++++ LA KLL + + I V +A+ + Q+V ++++ Sbjct: 698 ESGMPSVNNRQTVVFSATIPEEVQKLAAKLLREDYIFITVGCIGSANLDIEQYVLLMEQE 757 Query: 231 RKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALAD 290 KR+ L ++ K +++V K A+ ++ L++ +A+IHGN +Q R +AL D Sbjct: 758 NKRDKLLEIVQKRGEDKIIVSVEEKRMADFISAFLSQASFPTASIHGNLTQQEREKALRD 817 Query: 291 FKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALS-LV 349 F+SG +LVAT++AARGLDI E+ HV+NY++P E+YVHRIGR GR TG+A + V Sbjct: 818 FRSGVSPILVATNVAARGLDIPEVKHVINYDMPPHIEEYVHRIGRPGRCGNTGKATAFFV 877 Query: 350 CVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQ 409 ++ L R + K+L + + E + A+ I G R GGG+ GGR + Sbjct: 878 AEADNHLARSLVKVLSDALQEVP----EWLEKMAADNIGMGGFSRPGGGKF--GGRDMRN 931 Query: 410 PRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQ 442 R G +S + ++ G+ G+ Sbjct: 932 NRPGGYQQQSRPSHQQDEGRFFAGEGSRQGQNP 964 >UniRef50_A4BET4 DEAD/DEAH box helicase-like protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BET4_9GAMM Length = 579 Score = 549 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 144/400 (36%), Positives = 228/400 (57%), Gaps = 7/400 (1%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++F LGL+P +L+ + GY PTPIQ QAI +L+G D++ AQTGTGKTA F+LPLL Sbjct: 5 LTFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLL 64 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQM 119 + T + +AL+L PTRELA Q+ E + Y++ + N L ++GG + Q+ Sbjct: 65 SRIDTT------KNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQL 118 Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 L+ V+V TPGR++D + + L ++ LVLDEAD ML MGFI DI +L P Sbjct: 119 RALKQNPQVIVGTPGRVMDHLRRGTLDLSDLKHLVLDEADEMLRMGFIEDIDWILEHTPK 178 Query: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239 +Q LFSAT IK + ++ +P++IE+ ++ Q+ Q V K + L+ + Sbjct: 179 DKQTALFSATMPHQIKRITDQYQKDPVKIEIKASHSELQQIEQLVWRARGLDKLDGLTRI 238 Query: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299 + +W +++F RT+ L+E+L G + A+ G +Q R L+ K G + ++ Sbjct: 239 LEIEDWNAIIIFVRTRVECQFLSEKLAARGYAATALSGEVAQKQREDILSAMKKGKLDII 298 Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359 +ATD+AARG+DIE + HV+N+++P Y HRIGRTGRA +G+A+ E +++RD Sbjct: 299 IATDVAARGIDIERITHVINWDIPGDVSTYTHRIGRTGRAGRSGKAILFCKPREQRIIRD 358 Query: 360 IEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGR 399 IE+ K E+ +P E +A ++ + + Sbjct: 359 IERATKSELIDYPMPSAEKLGEHRAAAFKSTVVEHIEADK 398 >UniRef50_Q388E8 ATP-dependent DEAD/H RNA helicase, putative n=4 Tax=Trypanosoma RepID=Q388E8_9TRYP Length = 660 Score = 549 bits (1416), Expect = e-155, Method: Composition-based stats. Identities = 149/385 (38%), Positives = 226/385 (58%), Gaps = 11/385 (2%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 +SF + + P +L V GY +PTP+Q IP L RDLMA AQTG+GKTA + +P + Sbjct: 157 LSFSEMNMVPVLLENVKRCGYTKPTPVQSLGIPTALNHRDLMACAQTGSGKTASYLIPAI 216 Query: 61 Q----HLITRQPHAKGRRP-VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSI 115 ++ R P++ G +ALIL PTREL+ QI R ++ + +R +VV+GG Sbjct: 217 NEILLNISNRPPYSPGSHSSPQALILAPTRELSLQIYGEARKFTYHTPVRCVVVYGGADP 276 Query: 116 NPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVL- 174 Q+ +L G +LVATPGRL+D+ + V+ ++ L+LDEADRMLDMGF IR ++ Sbjct: 277 RHQVHELSRGCKLLVATPGRLMDMFSRGYVRFSEIRFLILDEADRMLDMGFEPQIRMIVQ 336 Query: 175 ---TKLPA--KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK 229 + +P +RQ LL+SATF +I+ LA + + ++V R + ++ +TQ V +++ Sbjct: 337 GPDSDMPRAGQRQTLLYSATFPVEIQRLAREFMCRHSFLQVGRVGSTTENITQDVRWIED 396 Query: 230 KRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALA 289 KR+ L ++ + + VLVF K A++L L + +IHG++ Q R AL Sbjct: 397 PDKRQALLTLLRENEGKLVLVFVEKKRDADYLERFLRNSELACVSIHGDRVQREREEALR 456 Query: 290 DFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLV 349 FKSG +VLVATD+A+RGLDI + V+ Y++P+ +DYVHRIGRTGRA G A+S Sbjct: 457 LFKSGACQVLVATDVASRGLDIPNVGVVIQYDMPSNIDDYVHRIGRTGRAGKVGVAISFF 516 Query: 350 CVDEHKLLRDIEKLLKKEIPRIAIP 374 ++ D+ LL + I+ Sbjct: 517 NEKNRNIVDDLIPLLNETNQVISPE 541 >UniRef50_Q30PP0 DEAD/DEAH box helicase-like protein n=11 Tax=Bacteria RepID=Q30PP0_SULDN Length = 540 Score = 549 bits (1416), Expect = e-155, Method: Composition-based stats. Identities = 163/472 (34%), Positives = 252/472 (53%), Gaps = 28/472 (5%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 ++FD LGL +ILR+V + G+ P+PIQ AIP +L GRD++ A TGTGKTA F LP L Sbjct: 14 ITFDDLGLKKEILRSVKDAGFTVPSPIQAAAIPFILAGRDIVGQAHTGTGKTAAFGLPAL 73 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 ++ V L++TPTRELA Q+ + + Y + + R++ V+GG S N Q+ Sbjct: 74 NNINPND-------GVGILVITPTRELATQVSDELFKYGRNIGARTVTVYGGSSYNRQID 126 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 ++ G V+VATPGRLLD+ +N +K I+VLDEAD MLDMGF+ DI + + LP+ Sbjct: 127 LIQRGASVVVATPGRLLDILKKNLLKDFAPSIVVLDEADEMLDMGFLDDINEIFSYLPSN 186 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 RQ LLFSAT IK LAE++L NP I + + T + + Q + +++ + + + ++ Sbjct: 187 RQTLLFSATMPKPIKLLAERILDNPEFISITKGETTNTDINQEYYVIEESERDDAIIRLM 246 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 Q+ +VF RTK + L+ L+ G + +HG+ Q R + FK+ ++VLV Sbjct: 247 DAEACQKSIVFCRTKSEVDRLSNVLSSAGYLANGLHGDMEQRQRETVIKGFKNNGVKVLV 306 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+ ++ + HV NY +P PE YVHRIGRTGRA G+A++L+ E K L+ I Sbjct: 307 ATDVAARGIHVDNISHVFNYHIPFDPESYVHRIGRTGRAGTKGKAITLLTPLEFKELQRI 366 Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQP---------- 410 + + + +P +I + I ++ ++ Sbjct: 367 KTKVGTTMTHAFVPSKNDLRAINLKSIATSIEEHNIYDEAHQILDMLKEDIDEPTIMFKL 426 Query: 411 -----RRGEGGAKSASAKPAEK------PSRRLGDAKPAGEQQRRRRPRKPA 451 R ++ PAEK + + D+K R R +P+ Sbjct: 427 VSMILDRQAIQGPNSIGIPAEKLAAILERADKRRDSKGGRGNFRGNRSARPS 478 >UniRef50_A2U4F0 DEAD/DEAH box helicase n=4 Tax=Flavobacteriales RepID=A2U4F0_9FLAO Length = 411 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 170/372 (45%), Positives = 251/372 (67%) Query: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 M F + L+ I +A+AE + +PT +Q++ IP VL+ ++++ +AQTGTGKTA F LP++ Sbjct: 1 MQFSDIPLNKSIQKAIAEARFHKPTLVQEKTIPLVLDKKNVIVAAQTGTGKTAAFALPII 60 Query: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 L +Q KG + ++AL++TPTRELA QI EN + YSKY N+RS VFGGVS+ PQ Sbjct: 61 NLLFDKQDAEKGEKKIKALVITPTRELAIQILENFKSYSKYSNLRSTAVFGGVSLEPQKE 120 Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180 L GVD+LVATPGRL+DL+ Q + L Q+EI VLDEAD MLDMGFI+DI+++ P K Sbjct: 121 ILAKGVDILVATPGRLIDLQMQGNIDLSQLEIFVLDEADLMLDMGFINDIKKIEKLCPRK 180 Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240 +Q LLFSAT + I L++ ++ N ++++ T + + Q ++++ KK K +L H++ Sbjct: 181 KQTLLFSATIPEKIDELSKSIVKNATKVDINPEETTAKNIGQLLYYLPKKNKTDLCLHLL 240 Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300 ++++F RTK + L + L K+G A+IHG+K+QG R +A+ DFKS +L+ Sbjct: 241 RNTINGKIIIFRRTKFAVDKLEQTLIKNGYNVASIHGDKTQGVRNKAIEDFKSKKASILI 300 Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 ATD+AARG+DI + ++N+++PNVPE YVHRIGRTGRA +G A S DE+ + I Sbjct: 301 ATDVAARGIDITNVDAIINFDIPNVPEIYVHRIGRTGRAGKSGIAFSFCSPDENNYIASI 360 Query: 361 EKLLKKEIPRIA 372 E L++K I I Sbjct: 361 ENLIEKSIKVIE 372 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.198 0.741 Lambda K H 0.267 0.0608 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,030,652,953 Number of Sequences: 3077464 Number of extensions: 285172122 Number of successful extensions: 1057867 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 8810 Number of HSP's successfully gapped in prelim test: 4108 Number of HSP's that attempted gapping in prelim test: 1000109 Number of HSP's gapped (non-prelim): 32663 length of query: 454 length of database: 1,040,396,356 effective HSP length: 132 effective length of query: 322 effective length of database: 634,171,108 effective search space: 204203096776 effective search space used: 204203096776 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 96 (41.0 bits)