 |
| Job Description | P25888 | | Confidence | 79.57% | Date | Thu Jan 5 11:42:41 GMT 2012 |
| Rank | 379 | Aligned Residues | 41 |
| % Identity | 15% | Template | c1w8jD_ |
| PDB info |
PDB header:motor protein | Chain: D: PDB Molecule:myosin va; |
PDBTitle: crystal structure of myosin v motor domain -2 nucleotide-free
|
| Resolution | 2.7 Å |
|
|   |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
R | E | P | T | P | I | Q | Q | Q | A | I | P | A | V | L | . |
. |
. |
E | G | R | D | L | M | A | S | A | Q | T | G | T | G | K | T | A | G | F | T | L | P | L | L | Q | H | L |
| Query Conservation |   |
  |   |
|   |   |
|
|   |   |
|
|   |   |
|
| . | . | . |   |
|   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |
|
|
|
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| Template Conservation |   |
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   | . |
|
|   |
|
|
| Template Sequence |   |
P | H | I | F | A | V | A | E | E | A | Y | K | Q | M | A | R | D | E | R | N | Q | S | I | I | V | S | G | E | S | G | A | G | K | T | V | S | A | K | Y | . |
A | M | R | Y | F |
| Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  |  |  |  |
| S | S | S | S | T | T |  |  |  |  |  | . |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  | . |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
137 | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | |
. | . | . | . | 180 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|