142 c1pjrA_ Probab=98.16   E-value=2.5e-05  Score=52.55  Aligned_columns=82  Identities=20%

Q ss_pred             CCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCC
Q ss_conf             98898999999999769989999279974789999999999973100001468847999957089999999999973021
Q batch____        22 REPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKY  101 (454)
Q Consensus        22 ~~p~~iQ~~ai~~il~g~~~iv~apTGsGKTl~~~lpil~~l~~~~~~~~~~~~~~~lii~Pt~eLa~Q~~~~~~~~~~~  101 (454)
                      ..+++-|.+||..  ....++|++|-|||||.+.+--+...+........     ++|+++||+..+.++.+++...+..
T Consensus        10 ~~L~~~Q~~ai~~--~~~~~lV~GppGTGKT~~l~~~i~~ll~~~~~~~~-----~ILv~s~tn~A~d~~~~ri~~~~~~   82 (623)
T c1pjrA_          10 AHLNKEQQEAVRT--TEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPW-----NILAITFTNKAAREMRERVQSLLGG   82 (623)
T ss_dssp             TTSCHHHHHHHHC--CSSCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGG-----GEEEEESSHHHHHHHHHHHHHHHGG
T ss_pred             HCCCHHHHHHHHC--CCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHH-----HEEEECCCHHHHHHHHHHHHHHHCC
T ss_conf             2038898999958--89978999488986779999999999980899977-----8789746989999999999996101


Q ss_pred             CCCEEEEEE
Q ss_conf             583489987
Q batch____       102 LNIRSLVVF  110 (454)
Q Consensus       102 ~~~~~~~~~  110 (454)
                      ..-.+...+
T Consensus        83 ~~~~~~i~T   91 (623)
T c1pjrA_          83 AAEDVWIST   91 (623)
T ss_dssp             GGTTSEEEE
T ss_pred             CCCCCEEEE
T ss_conf             102768975