235 c2cjdA_ Probab=99.72   E-value=6.6e-16  Score=117.20  Aligned_columns=328  Identities=16%

Q ss_pred             CCCCCC----CCCCCC---HHHHHHHHHHHH---------CCCCCCCHHHHHHHHHHHHHH---CCCEEEEECCHHHHHH
Q ss_conf             754656----788998---899999999998---------197218945899999999970---8987999899899999
Q batch____         2 SEFLPF----SRPAMG---VEELAAVKEVLE---------SGWITTGPKNQALEQAFCQLT---GNQHAIAVSSATAGMH   62 (379)
Q Consensus         2 ~~~~p~----~~p~~~---~~~~~a~~~~~~---------~g~~~~~p~~~~le~~lA~~~---g~~~~i~~~sgt~a~~   62 (379)
                      ++||.+    +.-.++   ++..+|+.+.++         ...-.+.+...++.+.+++++   +.+.+++++||++|+.
T Consensus        40 ~~ylD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~v~f~~sGseA~e  119 (436)
T c2cjdA_          40 RRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVE  119 (436)
T ss_dssp             CEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCCCCTTTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHH
T ss_conf             53442222277432688899999999999999988627766677789899999999998638757877998289689999


Q ss_pred             HHHHHCC-------------CCCCCEEEEECCCCHH-HHHHHHHHCCCCCCCEEECC-----------------------
Q ss_conf             9999703-------------7988889980786478-99999981663653201026-----------------------
Q batch____        63 ITLMALK-------------IGKGDEVITPSLTWVS-TLNMISLLGATPVMVDVDRD-----------------------  105 (379)
Q Consensus        63 ~~l~~l~-------------~~~Gd~Vl~~~~~~~~-~~~~~~~~g~~~~~~~~~~~-----------------------  105 (379)
                      .+++...             ..+...|++-...|++ +..++...+...........                       
T Consensus       120 ~AiklAr~~t~r~~~~~~~~~~~~~~ii~~~~syHG~t~~a~~lt~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  199 (436)
T c2cjdA_         120 NALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAAL  199 (436)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHH
T ss_conf             99999999972047544566677756999858633233878875187210126777768651007887567752014432


Q ss_pred             --CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC-------HHHHHHHHHHHCCCEEEEEECC-CCCCCCCCCCCCCCEEE
Q ss_conf             --6310188886300233222320014688788-------8999987875136508972022-67567986231148036
Q batch____       106 --TLMVTPEAIESAITPRTKAIIPVHYAGAPAD-------IDAIRAIGERYGIAVIEDAAHA-VGTYYKGRHIGAKGTAI  175 (379)
Q Consensus       106 --~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-------l~~i~~~a~~~~~~~i~D~a~~-~g~~~~~~~~~~~~~~~  175 (379)
                        ......+.........+..+......|.-..       +++|.++|++|++++|+|++++ +|...........++..
T Consensus       200 ~~~~~~~l~~~l~~~~~~iaa~I~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~~lI~DEv~tG~gR~G~~~a~~~~gv~p  279 (436)
T c2cjdA_         200 EAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAP  279 (436)
T ss_dssp             HHHHHHHHHHHHHHSTTTEEEEEECSEESTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCC
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHCCCC
T ss_conf             07999999999861798704999944101789845898899999999877297999806356887027872134407875


Q ss_pred             EEECCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHH
Q ss_conf             64045667689875499806799998768874067545554432110012344431024455688999999996200058
Q batch____       176 FSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDRQTWGRAPQAEVLTPGYKYNLTDINAAIALTQLVKLEH  255 (379)
Q Consensus       176 ~~~s~~K~l~~~~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~  255 (379)
                      .....+|.++++                     ++.......................+.......+++...........
T Consensus       280 Divt~sK~l~~g---------------------~~~~~~~~~~~~~~~~~~~~~~~~T~~~~~~~~aa~~a~l~~~~~~~  338 (436)
T c2cjdA_         280 DIVAFGKKTQVC---------------------GVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEG  338 (436)
T ss_dssp             SEEEECGGGSSE---------------------EEEECGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHHHT
T ss_pred             CEECCCHHHHCC---------------------HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHH
T ss_conf             401011043211---------------------02223335388885215885210154346999999732343017946


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHH
Q ss_conf             89999998999997631089837623678777740289999537546999899999999779688880431111233555
Q batch____       256 LNTRRREIAQQYQQALAALPFQPLSLPAWPHVHAWHLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYRE  335 (379)
Q Consensus       256 ~~~~~~~~~~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~  335 (379)
                      ..++.+++.+++++.|+++ ......+.......+.++.+.++...   ...++.+.|.++||.+.+..           
T Consensus       339 ~~~~~~~~~~~l~~~L~~l-~~~~~~~v~~vrg~G~~~~i~~~~~~---~~~~~~~~l~~~Gv~~~~~g-----------  403 (436)
T c2cjdA_         339 LFERAVQHGKYLRARLDEL-AADFPAVVLDPRGRGLMCAFSLPTTA---DRDELIRQLWQRAVIVLPAG-----------  403 (436)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HHHSTTTSEEEEEETTEEEEECSSHH---HHHHHHHHHHHTTEECEEET-----------
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHCCCCCCCCCCCCCEEEEEECCHH---HHHHHHHHHHHCCEEEEECC-----------
T ss_conf             8999999999999999999-98668644145656306999858967---99999999997796999269-----------


Q ss_pred             HCCCCCCCCHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             21546884367984892899638769999999999999998559
Q batch____       336 RFPTLSLPNTEWNSERICSLPLFPDMTTADADHVITALQQLAGQ  379 (379)
Q Consensus       336 ~~~~~~~p~~~~~~~~~irl~~~~~~t~edi~~i~~~l~~i~~~  379 (379)
                                    .+.|||.+...+|++|+|+++++|++++.+
T Consensus       404 --------------~~~irl~p~l~~t~~~id~~i~~l~~al~~  433 (436)
T c2cjdA_         404 --------------ADTVRFRPPLTVSTAEIDAAIAAVRSALPV  433 (436)
T ss_dssp             --------------TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             --------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             --------------988999308878899999999999999999