208 c3iraA_ Probab=96.92   E-value=0.018  Score=35.04  Aligned_columns=89  Identities=18%

Q ss_pred             CCEEEEEEECCCCHHHHHHHHHH-------HHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCC
Q ss_conf             88699999559997799999999-------99985198499999734468976999999998423733004689707898
Q batch____       106 EKHVITVFTDITCGYCHKLHEQM-------ADYNALGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSV  178 (236)
Q Consensus       106 ak~~i~vF~D~~Cp~C~~~~~~l-------~~~~~~~~~v~~~~~Pl~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~  178 (236)
                      +|..++.|.-.-|++|+.++.+.       +-+.+..|-|++-    ....|+-...-                      
T Consensus        39 ~Kpi~l~~~a~wC~~C~~m~~~~f~d~~v~~~ln~~FV~vkvD----~ee~pdl~~~y----------------------   92 (172)
T c3iraA_          39 NKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVD----REERPDIDNIY----------------------   92 (172)
T ss_dssp             TCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEE----TTTCHHHHHHH----------------------
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCCEEEEEC----CCCCCCHHHHH----------------------
T ss_conf             9909999850787214455677634288999966491599962----88681078999----------------------


Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCCCCEEEE--ECCEEE--CCCCCHHH------HHHHHHHHHH
Q ss_conf             82456889999999999748996847997--098181--17899999------9999999987
Q batch____       179 APASCDVDIADHYALGVQLGVSGTPAVVL--SNGTLV--PGYQPPKE------MKEFLDEHQK  231 (236)
Q Consensus       179 ~~~~~~~~i~~~~~la~~lGi~GTPt~i~--~dG~~v--~G~~~~~~------l~~~l~~~~k  231 (236)
                                 ........|+.|+|+++|  +||+.+  .+|.|++.      |.++|+....
T Consensus        93 -----------~~~~~~~~g~~G~P~~vfltPdgkp~~~~tY~P~~~~~~~~~f~~~L~~i~~  144 (172)
T c3iraA_          93 -----------MTVCQIILGRGGWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIKE  144 (172)
T ss_dssp             -----------HHHHHHHHSCCCSSEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHHHH
T ss_pred             -----------HHHHHHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             -----------9999987088998369999689987763033587765781018999999999