Phyre 2 alignment of P39343 with c1x3uA_

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Job Description | P39343
Confidence | 91.06% | Date | Thu Jan 5 11:59:33 GMT 2012
Rank | 313 | Aligned Residues | 45
% Identity | 13% | Template | c1x3uA_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:transcriptional regulatory protein fixj; | PDBTitle: solution structure of the c-terminal transcriptional2 activator domain of fixj from sinorhizobium melilot
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Query Sequence |  | S | L | Q | D | I | A | T | L | A | G | V | T | K | M | T | V | S | R | Y | I | R | S | . | P | K | K | V | A | K | E | T | G | E | R | I | A | K | I | M | E | E | I | N | Y | I | P
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Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | N | K | S | I | A | Y | D | L | D | I | S | P | R | T | V | E | V | H | R | A | N | V | M | A | K | M | K | A | K | S | L | P | H | L | V | R | M | A | L | A | G | G | F | G | P
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  | S |  |  |  |  |  |  |  |  |  |  |  | T |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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