 |
| Job Description | P62556 | | Confidence | 88.60% | Date | Thu Jan 5 12:07:37 GMT 2012 |
| Rank | 384 | Aligned Residues | 31 |
| % Identity | 39% | Template | c3juxA_ |
| PDB info |
PDB header:protein transport | Chain: A: PDB Molecule:protein translocase subunit seca; |
PDBTitle: structure of the translocation atpase seca from thermotoga2 maritima
|
| Resolution | 3.10 Å |
|
|   |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
| Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | A | A | H | K | G | G | V | Y | K | T | S | V | S | V | H | L | A | Q | D | L | A | L | K | G | L | R | V | L | L | V |
| Query Conservation |   |
|   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|
|
|   |   |
|
|   |   |
|   |
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |
|   |
|   |
|
|   |
|   |   |
|
|
|
|
| Template Sequence |   |
V | A | E | M | K | T | G | E | G | K | T | L | A | A | T | M | P | I | Y | L | N | A | L | I | G | K | G | V | H | L | V |
| Template Known Secondary structure |   |
 |  |  |
|
| T | T | S |
|  |  |  |  | T |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|