BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (385 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P76168 Putative lambdoid prophage Qin defective integra... 810 0.0 UniRef50_UPI0001826473 putative integrase n=1 Tax=Enterobacter c... 479 e-134 UniRef50_B6XGP6 Putative uncharacterized protein n=1 Tax=Provide... 384 e-105 UniRef50_A8GE25 Integrase family protein n=18 Tax=Enterobacteria... 375 e-102 UniRef50_C6UV22 Site-specific recombinase, phage integrase famil... 320 8e-86 UniRef50_A2P3A8 Integrase n=3 Tax=Vibrionaceae RepID=A2P3A8_VIBCH 311 2e-83 UniRef50_P76056 Putative lambdoid prophage Rac integrase n=30 Ta... 305 2e-81 UniRef50_D0Z3D7 Putative integrase n=1 Tax=Photobacterium damsel... 277 6e-73 UniRef50_A7MYL9 Putative uncharacterized protein n=3 Tax=Vibrio ... 255 2e-66 UniRef50_C6DJ77 Integrase family protein n=4 Tax=Enterobacteriac... 249 1e-64 UniRef50_B0KSD4 Integrase family protein n=1 Tax=Pseudomonas put... 193 9e-48 UniRef50_A8T0M8 Putative integrase n=1 Tax=Vibrio sp. AND4 RepID... 187 7e-46 UniRef50_Q1ZMG0 Phage integrase n=2 Tax=Photobacterium RepID=Q1Z... 144 6e-33 UniRef50_UPI0001BC493F putative integrase n=1 Tax=Neisseria muco... 144 7e-33 UniRef50_A9KZM7 Integrase family protein n=4 Tax=Gammaproteobact... 141 5e-32 UniRef50_A6GR01 Phage integrase n=3 Tax=Proteobacteria RepID=A6G... 135 3e-30 UniRef50_C6MG53 Integrase family protein n=1 Tax=Nitrosomonas sp... 134 5e-30 UniRef50_B0VUJ0 Putative integrase n=1 Tax=Acinetobacter baumann... 132 2e-29 UniRef50_A7N7U1 Putative uncharacterized protein n=1 Tax=Vibrio ... 131 5e-29 UniRef50_C1D584 Phage integrase n=1 Tax=Laribacter hongkongensis... 129 3e-28 UniRef50_C4TVA5 Bacteriophage integrase n=3 Tax=Enterobacteriace... 128 4e-28 UniRef50_Q1QXU7 Phage integrase n=4 Tax=root RepID=Q1QXU7_CHRSD 128 4e-28 UniRef50_A5WDD8 Phage integrase family protein n=6 Tax=Proteobac... 127 6e-28 UniRef50_A9BYB6 Integrase family protein n=2 Tax=Comamonadaceae ... 126 1e-27 UniRef50_D0J3Y8 Phage integrase n=5 Tax=Burkholderiales RepID=D0... 125 3e-27 UniRef50_C1SH90 Site-specific recombinase XerD n=2 Tax=Denitrovi... 123 1e-26 UniRef50_Q7N1I7 Similar to bacteriophage integrase n=8 Tax=Enter... 123 1e-26 UniRef50_A3D4Z5 Phage integrase family protein n=3 Tax=Shewanell... 122 2e-26 UniRef50_Q31DR3 Tyrosine recombinase n=1 Tax=Thiomicrospira crun... 120 7e-26 UniRef50_A4G7G1 Putative integrase n=1 Tax=Herminiimonas arsenic... 119 1e-25 UniRef50_A3JCU8 Phage integrase n=2 Tax=Marinobacter sp. ELB17 R... 116 1e-24 UniRef50_A8HM00 Phage integrase n=5 Tax=Proteobacteria RepID=A8H... 115 2e-24 UniRef50_Q2T7M7 Bbp50 n=13 Tax=root RepID=Q2T7M7_BURTA 114 7e-24 UniRef50_C1SH28 Site-specific recombinase XerD n=1 Tax=Denitrovi... 113 9e-24 UniRef50_A4AD26 Prophage integrase n=5 Tax=Gammaproteobacteria R... 113 1e-23 UniRef50_D1B4J0 Integrase family protein n=1 Tax=Sulfurospirillu... 110 7e-23 UniRef50_D1RC05 Putative uncharacterized protein n=1 Tax=Parachl... 107 5e-22 UniRef50_A1TPL3 Phage integrase family protein n=1 Tax=Acidovora... 105 2e-21 UniRef50_A8FW51 Putative pore-forming cytotoxin integrase n=1 Ta... 105 3e-21 UniRef50_A0KWT4 Phage integrase family protein n=5 Tax=Gammaprot... 103 9e-21 UniRef50_Q87MU5 Putative pore-forming cytotoxin integrase n=2 Ta... 103 1e-20 UniRef50_D0S8U2 Phage integrase n=1 Tax=Acinetobacter johnsonii ... 102 2e-20 UniRef50_C0VGS2 Phage integrase n=2 Tax=Acinetobacter RepID=C0VG... 102 2e-20 UniRef50_Q17VL1 Bacteriophage-related integrase n=4 Tax=Helicoba... 101 4e-20 UniRef50_Q12GK7 Phage integrase n=11 Tax=Proteobacteria RepID=Q1... 101 4e-20 UniRef50_A8ZS80 Integrase family protein n=1 Tax=Desulfococcus o... 100 7e-20 UniRef50_C4LFZ6 Integrase family protein n=1 Tax=Tolumonas auens... 99 3e-19 UniRef50_D1CFY4 Integrase family protein n=1 Tax=Thermobaculum t... 96 2e-18 UniRef50_B2JUB3 Integrase family protein n=2 Tax=Burkholderiales... 96 2e-18 UniRef50_C0QBZ6 Predicted bacteriophage P4 integrase n=1 Tax=Des... 96 3e-18 UniRef50_A4WAT6 Putative uncharacterized protein n=1 Tax=Enterob... 95 4e-18 UniRef50_C1SH59 Site-specific recombinase XerD n=1 Tax=Denitrovi... 95 5e-18 UniRef50_Q2T3Q9 Bacteriophage integrase family protein n=5 Tax=P... 94 6e-18 UniRef50_B4RWG8 Phage integrase n=1 Tax=Alteromonas macleodii 'D... 94 6e-18 UniRef50_C9RBE5 Integrase family protein n=1 Tax=Ammonifex degen... 94 7e-18 UniRef50_Q4FUG6 Possible phage integrase n=1 Tax=Psychrobacter a... 94 9e-18 UniRef50_B1J5J4 Integrase family protein n=4 Tax=Pseudomonas Rep... 94 1e-17 UniRef50_C3EB65 DNA integration/recombination/invertion protein ... 93 2e-17 UniRef50_C5T6H4 Integrase family protein n=2 Tax=Burkholderiales... 92 4e-17 UniRef50_C3K9Z5 Putative phage integrase n=1 Tax=Pseudomonas flu... 88 6e-16 UniRef50_B0KAZ5 Phage integrase family protein n=3 Tax=Thermoana... 88 6e-16 UniRef50_Q4HNR8 Site-specific recombinase, phage integrase famil... 87 1e-15 UniRef50_A8RCT4 Putative uncharacterized protein n=1 Tax=Eubacte... 86 2e-15 UniRef50_Q3JF08 Phage integrase n=2 Tax=Nitrosococcus oceani Rep... 86 2e-15 UniRef50_Q8R890 Tyrosine recombinase xerC-like n=5 Tax=Clostridi... 86 2e-15 UniRef50_Q30S15 Phage integrase n=2 Tax=Campylobacterales RepID=... 86 2e-15 UniRef50_D1B215 Integrase family protein n=1 Tax=Sulfurospirillu... 86 3e-15 UniRef50_A2V4W2 Phage integrase n=5 Tax=Gammaproteobacteria RepI... 85 4e-15 UniRef50_Q1AUQ4 Phage integrase n=3 Tax=Rubrobacter xylanophilus... 85 5e-15 UniRef50_UPI0001973B6A integrase family protein n=1 Tax=Clostrid... 84 6e-15 UniRef50_B9KXE0 Transposase n=1 Tax=Thermomicrobium roseum DSM 5... 84 8e-15 UniRef50_B8F9V7 Integrase family protein n=1 Tax=Desulfatibacill... 84 9e-15 UniRef50_A8UWI5 Phage integrase n=1 Tax=Hydrogenivirga sp. 128-5... 84 1e-14 UniRef50_A1K6M5 Site-specific recombinase, phage integrase famil... 82 2e-14 UniRef50_B9MR26 Integrase family protein n=2 Tax=Anaerocellum th... 82 2e-14 UniRef50_A6NY15 Putative uncharacterized protein n=1 Tax=Bactero... 82 3e-14 UniRef50_A3D3X0 Phage integrase family protein n=1 Tax=Shewanell... 82 3e-14 UniRef50_C1XYN2 Site-specific recombinase XerD n=1 Tax=Meiotherm... 81 5e-14 UniRef50_B6W9U7 Putative uncharacterized protein n=1 Tax=Anaeroc... 81 8e-14 UniRef50_C7XQF9 Phage integrase n=1 Tax=Fusobacterium sp. 3_1_36... 80 1e-13 UniRef50_B6G0S2 Putative uncharacterized protein n=1 Tax=Clostri... 79 2e-13 UniRef50_Q2RHJ2 Phage integrase n=3 Tax=Firmicutes RepID=Q2RHJ2_... 79 2e-13 UniRef50_D2LSV7 Integrase family protein n=1 Tax=Bacillus cellul... 79 3e-13 UniRef50_Q65EQ4 Lambda integrase-like, N-terminal,DNA breaking-r... 79 3e-13 UniRef50_UPI0001873836 hypothetical protein PSPTOT1_3787 n=1 Tax... 79 3e-13 UniRef50_B1VP49 Putative phage integrase n=1 Tax=Streptomyces gr... 79 3e-13 UniRef50_A1WV14 Phage integrase family protein n=1 Tax=Halorhodo... 79 4e-13 UniRef50_C1SIY0 Site-specific recombinase XerD n=1 Tax=Denitrovi... 79 4e-13 UniRef50_Q3Z840 Site-specific recombinase, phage integrase famil... 78 6e-13 UniRef50_C6QSP6 Integrase family protein n=1 Tax=Geobacillus sp.... 77 8e-13 UniRef50_C2E2T4 Bacteriophage integrase n=5 Tax=Lactobacillus Re... 77 9e-13 UniRef50_B9MP49 Integrase family protein n=1 Tax=Anaerocellum th... 77 1e-12 UniRef50_UPI0001C31A42 integrase family protein n=2 Tax=Conexiba... 77 1e-12 UniRef50_A6Q245 Site-specific recombinase, phage integrase famil... 77 1e-12 UniRef50_A6QA80 Site-specific recombinase, phage integrase famil... 76 2e-12 UniRef50_UPI0001C37D82 integrase family protein n=1 Tax=Ruminoco... 76 2e-12 UniRef50_A7WY94 Integrase homolog n=25 Tax=Firmicutes RepID=A7WY... 76 2e-12 UniRef50_A7HZQ7 Bacteriophage-related integrase n=3 Tax=Campylob... 76 2e-12 UniRef50_B1RM53 Phage integrase n=4 Tax=Clostridium RepID=B1RM53... 76 2e-12 UniRef50_A5TWD8 Possible integrase n=3 Tax=Fusobacterium RepID=A... 75 3e-12 UniRef50_D2S8K7 Integrase family protein n=1 Tax=Geodermatophilu... 75 4e-12 UniRef50_Q5X3B3 Putative uncharacterized protein n=2 Tax=Gammapr... 75 4e-12 UniRef50_C2EIM6 Phage integrase n=1 Tax=Lactobacillus salivarius... 74 6e-12 UniRef50_C3XGP1 Phage integrase n=1 Tax=Helicobacter bilis ATCC ... 74 7e-12 UniRef50_A1AUY6 Phage integrase family protein n=2 Tax=Desulfuro... 74 7e-12 UniRef50_C8WVH7 Integrase family protein n=1 Tax=Alicyclobacillu... 74 8e-12 UniRef50_B7WQQ6 Integrase family protein n=1 Tax=Comamonas testo... 74 8e-12 UniRef50_B8I354 Integrase family protein n=1 Tax=Clostridium cel... 74 8e-12 UniRef50_A4ILC8 DNA integration/recombination/invertion protein ... 74 8e-12 UniRef50_A7H224 Phage integrase n=4 Tax=Campylobacter RepID=A7H2... 74 9e-12 UniRef50_D1SSC0 Putative uncharacterized protein n=1 Tax=Acidovo... 74 1e-11 UniRef50_B7WRL6 Bbp50 n=1 Tax=Comamonas testosteroni KF-1 RepID=... 73 1e-11 UniRef50_Q30RZ4 Phage integrase n=1 Tax=Sulfurimonas denitrifica... 73 2e-11 UniRef50_B6FRP3 Putative uncharacterized protein n=4 Tax=Bacteri... 73 2e-11 UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfov... 73 2e-11 UniRef50_Q72GH2 DNA integration/recombination/invertion protein ... 73 2e-11 UniRef50_Q4KFM1 Integrase n=1 Tax=Pseudomonas fluorescens Pf-5 R... 73 2e-11 UniRef50_UPI0001C3746F phage integrase family site specific reco... 73 2e-11 UniRef50_D0ADR3 Predicted protein n=2 Tax=Enterococcus faecium R... 73 2e-11 UniRef50_B1QG70 Phage integrase n=1 Tax=Clostridium botulinum Bf... 73 2e-11 UniRef50_B7AAK4 Integrase family protein n=3 Tax=Thermus aquatic... 73 2e-11 UniRef50_C9C7Z3 Phage integrase n=2 Tax=Bacilli RepID=C9C7Z3_ENTFC 72 3e-11 UniRef50_A0JQR3 Phage integrase n=3 Tax=Lactobacillus salivarius... 72 3e-11 UniRef50_A4XMZ7 Phage integrase family protein n=3 Tax=Clostridi... 71 6e-11 UniRef50_B6BNI8 Phage integrase n=1 Tax=Campylobacterales bacter... 71 6e-11 UniRef50_D2S5L4 Integrase family protein n=1 Tax=Geodermatophilu... 71 6e-11 UniRef50_D0XDY6 Putative uncharacterized protein n=1 Tax=Vibrio ... 70 1e-10 UniRef50_B6FTU6 Putative uncharacterized protein n=1 Tax=Clostri... 70 1e-10 UniRef50_Q1CP24 DNA integration/recombination/inversion protein ... 70 1e-10 UniRef50_Q1BC50 Phage integrase n=4 Tax=Mycobacterium RepID=Q1BC... 70 1e-10 UniRef50_B0PGN2 Putative uncharacterized protein n=2 Tax=Clostri... 70 2e-10 UniRef50_A4XMV7 Phage integrase family protein n=2 Tax=Caldicell... 70 2e-10 UniRef50_B5E8A2 Integrase family protein n=1 Tax=Geobacter bemid... 70 2e-10 UniRef50_B7IY65 DNA integration/recombination/invertion protein ... 70 2e-10 UniRef50_Q859R3 ORF39 n=1 Tax=Thermus phage IN93 RepID=Q859R3_9VIRU 70 2e-10 UniRef50_Q2JGT4 Phage integrase n=4 Tax=Frankia RepID=Q2JGT4_FRASC 70 2e-10 UniRef50_A7GY77 ATP synthase C chain (Lipid-binding protein)(Dic... 69 2e-10 UniRef50_B9KYK7 Putative integrase n=1 Tax=Thermomicrobium roseu... 69 3e-10 UniRef50_C6MS46 Integrase family protein n=1 Tax=Geobacter sp. M... 69 4e-10 UniRef50_A6P1X5 Putative uncharacterized protein n=2 Tax=Bacteri... 69 4e-10 UniRef50_B9MQ70 Integrase family protein n=1 Tax=Anaerocellum th... 69 4e-10 UniRef50_C2Z776 Prophage LambdaBa04, site-specific recombinase, ... 69 4e-10 UniRef50_C0CSR1 Putative uncharacterized protein n=1 Tax=Clostri... 68 5e-10 UniRef50_B1HMD1 Putative uncharacterized protein n=1 Tax=Lysinib... 68 6e-10 UniRef50_D1C8V1 Integrase family protein n=1 Tax=Sphaerobacter t... 68 6e-10 UniRef50_B0KAT2 Phage integrase family protein n=7 Tax=Clostridi... 67 9e-10 UniRef50_C5SDU6 Integrase family protein n=1 Tax=Allochromatium ... 67 9e-10 UniRef50_C7WHB1 Putative uncharacterized protein n=1 Tax=Enteroc... 67 1e-09 UniRef50_Q1CQ02 DNA integration/recombination/inversion protein ... 67 1e-09 UniRef50_C4XJH7 Putative site-specific recombinase n=3 Tax=Desul... 67 1e-09 UniRef50_C5UVC6 Site-specific recombinase, phage integrase famil... 67 1e-09 UniRef50_C8X726 Integrase family protein n=1 Tax=Nakamurella mul... 67 1e-09 UniRef50_C0QHJ7 Phage integrase family protein n=1 Tax=Desulfoba... 67 1e-09 UniRef50_B2UXR9 Phage integrase n=3 Tax=Clostridium RepID=B2UXR9... 67 1e-09 UniRef50_B1I9D1 Site-specific recombinase, phage integrase famil... 67 1e-09 UniRef50_B6KBF3 Putative uncharacterized protein n=3 Tax=Toxopla... 67 1e-09 UniRef50_C8PFF6 Putative phage integrase n=1 Tax=Campylobacter g... 67 2e-09 UniRef50_Q2IFG9 Phage integrase n=2 Tax=Cystobacterineae RepID=Q... 67 2e-09 UniRef50_B3E8B2 Integrase family protein n=1 Tax=Geobacter lovle... 67 2e-09 UniRef50_B7DTQ3 Integrase family protein n=2 Tax=Bacillales RepI... 66 2e-09 UniRef50_Q38Y39 Site-specific recombinase, prophage lsa1 integra... 66 2e-09 UniRef50_D0DRR6 Site-specific recombinase n=1 Tax=Lactobacillus ... 66 3e-09 UniRef50_C6J9M1 Putative uncharacterized protein n=1 Tax=Ruminoc... 65 3e-09 UniRef50_C4XTU2 Putative site-specific recombinase n=5 Tax=Desul... 65 3e-09 UniRef50_D0IYY1 Phage integrase n=1 Tax=Comamonas testosteroni C... 65 3e-09 UniRef50_C6JIX5 Phage integrase n=1 Tax=Fusobacterium varium ATC... 65 3e-09 UniRef50_Q3ABG2 Prophage LambdaCh01, site-specific recombinase, ... 65 4e-09 UniRef50_A7VVX9 Putative uncharacterized protein n=2 Tax=Clostri... 65 4e-09 UniRef50_C3WEM5 DNA integration/recombination/invertion protein ... 65 5e-09 UniRef50_B4BIA4 Integrase family protein n=2 Tax=Geobacillus Rep... 65 5e-09 UniRef50_C1CZ59 Putative Tyrosine recombinase xerC-like protein ... 65 5e-09 UniRef50_A0JQA1 Phage integrase n=2 Tax=Lactobacillales RepID=A0... 65 6e-09 UniRef50_D1VST0 Phage integrase n=1 Tax=Peptoniphilus lacrimalis... 65 6e-09 UniRef50_B9EBJ7 Integrase n=1 Tax=Macrococcus caseolyticus JCSC5... 65 6e-09 UniRef50_Q88IR2 Integrase, putative n=1 Tax=Pseudomonas putida K... 64 6e-09 UniRef50_B1B8Q2 Phage integrase n=1 Tax=Clostridium botulinum C ... 64 6e-09 UniRef50_A7VEW1 Putative uncharacterized protein n=4 Tax=Clostri... 64 6e-09 UniRef50_B0TX96 Phage integrase family protein n=19 Tax=Francise... 64 7e-09 UniRef50_B8FRH1 Integrase family protein n=3 Tax=Clostridiales R... 64 8e-09 UniRef50_C6QLH5 Integrase family protein n=2 Tax=Geobacillus Rep... 64 1e-08 UniRef50_C9R814 Integrase family protein n=2 Tax=Ammonifex degen... 64 1e-08 UniRef50_C8NEN7 Integrase/recombinase XerC n=2 Tax=Granulicatell... 64 1e-08 UniRef50_B1HX61 Tyrosine recombinase xerC-like protein n=3 Tax=B... 64 1e-08 UniRef50_Q1RJE3 Integrase n=9 Tax=Rickettsia RepID=Q1RJE3_RICBR 64 1e-08 UniRef50_C3L682 Prophage LambdaBa04, site-specific recombinase, ... 64 1e-08 UniRef50_Q03L48 Integrase n=30 Tax=Streptococcus RepID=Q03L48_STRTD 63 1e-08 UniRef50_C8WAJ5 Integrase family protein n=2 Tax=Atopobium RepID... 63 2e-08 UniRef50_Q854V7 Gp41 n=1 Tax=Mycobacterium phage Che9c RepID=Q85... 63 2e-08 UniRef50_UPI0001BCC5A1 phage integrase n=1 Tax=Aeromicrobium mar... 63 2e-08 UniRef50_C9RA80 Integrase family protein n=1 Tax=Ammonifex degen... 63 2e-08 UniRef50_A4U1R8 Phage-related integrase n=1 Tax=Magnetospirillum... 63 2e-08 UniRef50_C7TH34 Phage-related integrase n=1 Tax=Lactobacillus rh... 63 2e-08 UniRef50_UPI0001C39245 phage integrase family protein n=1 Tax=Ar... 63 2e-08 UniRef50_D2BJR0 Site-specific recombinase, phage integrase famil... 63 2e-08 UniRef50_UPI0001C376B0 phage integrase family site specific reco... 63 2e-08 UniRef50_C7GI02 Site-specific recombinase, phage integrase famil... 63 2e-08 UniRef50_Q65KI2 Hypothetical Lambda integrase-like, N-terminal,D... 63 2e-08 UniRef50_D1CCF9 Integrase family protein n=1 Tax=Thermobaculum t... 62 2e-08 UniRef50_D1PRY2 Site-specific recombinase, phage integrase famil... 62 2e-08 UniRef50_Q0W0L4 Integrase n=2 Tax=Euryarchaeota RepID=Q0W0L4_UNCMA 62 3e-08 UniRef50_UPI0001C37419 Phage integrase n=1 Tax=Ruminococcus flav... 62 3e-08 UniRef50_C5WEI1 Site-specific recombinase, phage integrase famil... 62 3e-08 UniRef50_A8LM37 Integrase family protein n=3 Tax=Rhodobacterales... 62 3e-08 UniRef50_UPI0001BC466B phage integrase family protein n=1 Tax=Fu... 62 3e-08 UniRef50_A1UH53 Phage integrase family protein n=3 Tax=root RepI... 62 3e-08 UniRef50_A8MGA1 Integrase family protein n=7 Tax=Clostridiaceae ... 62 3e-08 UniRef50_C7GF85 Phage integrase n=2 Tax=Clostridiales RepID=C7GF... 62 4e-08 UniRef50_C7N3D0 Site-specific recombinase XerD n=1 Tax=Slackia h... 62 4e-08 UniRef50_B4B3C5 Integrase family protein n=1 Tax=Cyanothece sp. ... 62 4e-08 UniRef50_D1B1M5 Integrase family protein n=2 Tax=Sulfurospirillu... 62 5e-08 UniRef50_C9LR41 Toxin-antitoxin system, toxin component, PIN fam... 62 5e-08 UniRef50_C2F0I9 Transposon integrase n=3 Tax=Firmicutes RepID=C2... 62 5e-08 UniRef50_A3IWY1 Tn554, transposase A n=2 Tax=Cyanothece sp. CCY0... 62 5e-08 UniRef50_A0AGT2 Complete genome n=7 Tax=Bacilli RepID=A0AGT2_LISW6 61 5e-08 UniRef50_C6LG06 Prophage LambdaBa02, site-specific recombinase, ... 61 5e-08 UniRef50_Q3AB72 Tyrosine recombinase XerC n=1 Tax=Carboxydotherm... 61 6e-08 UniRef50_D0GPE3 Site-specific recombinase, phage integrase famil... 61 6e-08 UniRef50_Q6ALN4 Related to pore-forming cytotoxin integrase n=1 ... 61 6e-08 UniRef50_Q3Z6H5 Site-specific recombinase, phage integrase famil... 61 6e-08 UniRef50_B6ALG3 Integrase n=1 Tax=Leptospirillum sp. Group II '5... 61 6e-08 UniRef50_C1SNQ2 Site-specific recombinase XerD n=1 Tax=Denitrovi... 61 6e-08 UniRef50_C1XF66 Site-specific recombinase XerD n=4 Tax=Meiotherm... 61 7e-08 UniRef50_Q7MRS4 Putative uncharacterized protein n=1 Tax=Wolinel... 61 7e-08 UniRef50_C7H2F1 Prophage LambdaCh01, site-specific recombinase, ... 61 8e-08 UniRef50_A5ZQX5 Putative uncharacterized protein n=1 Tax=Ruminoc... 61 8e-08 UniRef50_D1XEM4 Integrase family protein n=1 Tax=Streptomyces sp... 61 8e-08 UniRef50_C0GET2 Integrase family protein n=1 Tax=Dethiobacter al... 61 9e-08 UniRef50_P96629 ICEBs1 integrase n=1 Tax=Bacillus subtilis RepID... 60 9e-08 UniRef50_D2LXB3 Integrase family protein n=1 Tax=Bacillus cellul... 60 9e-08 UniRef50_Q1Q549 Similar to site-specific tyrosine recombinase n=... 60 9e-08 UniRef50_C9AZK9 Phage integrase n=6 Tax=Enterococcus RepID=C9AZK... 60 1e-07 UniRef50_B1I2A9 Phage integrase family protein n=1 Tax=Candidatu... 60 1e-07 UniRef50_D0AFR5 Predicted protein n=1 Tax=Enterococcus faecium T... 60 1e-07 UniRef50_C0GWH6 Integrase family protein n=3 Tax=Desulfonatronos... 60 1e-07 UniRef50_Q8ERR7 Hypothetical conserved protein n=1 Tax=Oceanobac... 60 1e-07 UniRef50_C7VU19 Phage integrase n=3 Tax=Enterococcus faecalis Re... 60 1e-07 UniRef50_A6GBT9 Phage integrase n=2 Tax=Plesiocystis pacifica SI... 60 1e-07 UniRef50_Q7A4J3 Int protein n=24 Tax=Bacilli RepID=Q7A4J3_STAAN 60 1e-07 UniRef50_C8WP09 Integrase family protein n=1 Tax=Eggerthella len... 60 1e-07 UniRef50_Q1D2W1 Site-specific recombinase, phage integrase famil... 60 1e-07 UniRef50_B7GVF6 Tyrosine recombinase xerC n=1 Tax=Acinetobacter ... 60 1e-07 UniRef50_A6NXL1 Putative uncharacterized protein n=2 Tax=Bacteri... 60 1e-07 UniRef50_Q0C629 Tyrosine recombinase XerD n=2 Tax=Hyphomonadacea... 60 1e-07 UniRef50_D2L4K8 Integrase family protein n=1 Tax=Desulfovibrio s... 60 1e-07 UniRef50_O55248 Integrase n=4 Tax=root RepID=O55248_9VIRU 60 2e-07 UniRef50_C4XTG1 Site-specific recombinase n=1 Tax=Desulfovibrio ... 60 2e-07 UniRef50_UPI0001C35B62 integrase family protein n=1 Tax=Clostrid... 60 2e-07 UniRef50_C2VI23 Site-specific recombinase, phage integrase n=3 T... 60 2e-07 UniRef50_C3XFN5 Phage integrase n=1 Tax=Helicobacter bilis ATCC ... 60 2e-07 UniRef50_C0EDT0 Putative uncharacterized protein n=2 Tax=Clostri... 60 2e-07 >UniRef50_P76168 Putative lambdoid prophage Qin defective integrase (Fragment) n=64 Tax=root RepID=INTQ_ECOLI Length = 385 Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/385 (100%), Positives = 385/385 (100%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL Sbjct: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN Sbjct: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW Sbjct: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAID 240 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAID Sbjct: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAID 240 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW Sbjct: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN Sbjct: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 Query: 361 AQVALLNTQLSEFAPTMPHNEAMKN 385 AQVALLNTQLSEFAPTMPHNEAMKN Sbjct: 361 AQVALLNTQLSEFAPTMPHNEAMKN 385 >UniRef50_UPI0001826473 putative integrase n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826473 Length = 431 Score = 479 bits (1233), Expect = e-134, Method: Compositional matrix adjust. Identities = 220/381 (57%), Positives = 290/381 (76%), Gaps = 3/381 (0%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 GELR+SVC++IKTG F+YA QFP S NL +FG +++T+ ELA K+L LK E++ ++ Sbjct: 45 GELRASVCFSIKTGSFNYAAQFPDSPNLRRFGMESKEITVLELANKWLELKRMEISTNAM 104 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 + Y ++ +N++ IG L S++ +E LL +RKELLTGY + K+ GRS TVNN Sbjct: 105 SRYSSIARNMVPRIGGDRLVSAVTQEDLLFIRKELLTGYHVLKTGQKTPVKGRSVRTVNN 164 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 YM ++ +F F D+GY+ NPF GIS LK +RT PDPL+REEFIR+I+AC +QQ KN+W Sbjct: 165 YMRTMSGMFNFAADSGYVKANPFNGISLLKRARTEPDPLTREEFIRMINACTHQQLKNMW 224 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN--LAKDRFTVPKTQAGTNRVIHLIKPA 238 ++VYTGVR GEL AL WEDIDLK GTM+IRRN L K+ FT+PKT+AGT+R+I+LI+PA Sbjct: 225 SLAVYTGVRHGELVALAWEDIDLKAGTMIIRRNHTLTKE-FTLPKTEAGTDRIINLIQPA 283 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 ID L+SQ +TRL K+H I+V REYGR+ CTFVF P++ +R G+H+ V SI Q Sbjct: 284 IDVLKSQAEMTRLGKQHQIEVKLREYGRSVAHPCTFVFNPQIVSRNSLAGNHYAVGSINQ 343 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 W++A++RAG+R+RK+YQSRHTYACWSL AGANP FIA QMGH DAQMV++VYG WM+EN Sbjct: 344 SWESAMRRAGIRYRKAYQSRHTYACWSLAAGANPNFIAKQMGHTDAQMVYRVYGSWMAEN 403 Query: 359 NNAQVALLNTQLSEFAPTMPH 379 N QV +LN +LSEFAP+MPH Sbjct: 404 NQDQVLILNQKLSEFAPSMPH 424 >UniRef50_B6XGP6 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XGP6_9ENTR Length = 427 Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust. Identities = 179/380 (47%), Positives = 256/380 (67%), Gaps = 6/380 (1%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 GELR+++CY IKTG FDY+ +FP S+N + + +++T +A K++ LK EVA ++ Sbjct: 44 GELRTAICYKIKTGAFDYSVEFPESKNCNEKSISNKNVTFGYVANKWVELKRIEVAVSTF 103 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 Y++++ + I + + + N E +L VR ++LT I N V++ GRS TVNN Sbjct: 104 EAYKSIVNVLFFFIDKNKMINLFNLEDILSVRNKMLTSPTIEPVNR-VSKIGRSVSTVNN 162 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 YM LN +F F +N Y+ N I LK+SR +PDP+++EEF RL++A RN QAKN+ Sbjct: 163 YMKILNCIFCFAAENKYIETNVLSSIKNLKKSRAVPDPITKEEFPRLLNATRNIQAKNML 222 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK-DRFTVPKTQAGTNRVIHLIKPAI 239 VSVYTG+RPGELCAL +EDID T+ ++RN++ F++PKT + T+RVIH++ P Sbjct: 223 IVSVYTGLRPGELCALAYEDIDFIERTITVKRNISNIGDFSLPKTPSSTDRVIHMLDPVY 282 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 ++LR QM+LTR++ I++V REYG+ + CTFVFQP V AR H++ + Sbjct: 283 ESLREQMSLTRMTSPEIVNVEMREYGKYREDSCTFVFQPSVVARNGLETKHYSPGGFNGI 342 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 W A IKR+G+RHRKSYQ+RHTYACW L+AGANPAFIA QMGH+ A+M++ VYG WM EN+ Sbjct: 343 WGALIKRSGVRHRKSYQTRHTYACWMLSAGANPAFIATQMGHSSAKMIYDVYGAWMKEND 402 Query: 360 NAQVALLNTQLSEFAPTMPH 379 Q+A++N AP MPH Sbjct: 403 KDQIAIMNRN----APHMPH 418 >UniRef50_A8GE25 Integrase family protein n=18 Tax=Enterobacteriaceae RepID=A8GE25_SERP5 Length = 428 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 179/386 (46%), Positives = 263/386 (68%), Gaps = 5/386 (1%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 GELR+SVCY IKTG F Y K+FP+SRN+ AR+++T+ ++ +K+L LKE EV+K +L Sbjct: 43 GELRTSVCYEIKTGNFSYEKRFPNSRNV-TINAARENITVNDIIKKWLNLKEMEVSKGTL 101 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPK--SNYIVTQPGRSAVTV 118 Y + S + + + I +E +L RK +LT Q PK + GR+ TV Sbjct: 102 YRYTSHCGVTASYLNPERKINEIRQEDILLARKRMLTEPQQPKIHEKRKSVRQGRAVPTV 161 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKN 178 N+YM + A+F F V NGY+A+NPF+G+SPLK+ R PDPL++EE+ R+I +C QQ +N Sbjct: 162 NSYMFCMRAIFDFAVSNGYIANNPFEGVSPLKKQRPAPDPLTKEEYQRVIVSCPTQQMRN 221 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-KDRFTVPKTQAGTNRVIHLIKP 237 + +++ TG+R GEL AL WED+D +N T+ I RNL+ K+ FT+PKT AG R I L Sbjct: 222 MITLAINTGLRHGELYALAWEDLDTQNWTISISRNLSLKEHFTLPKTDAGM-RTIQLTTV 280 Query: 238 AIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIR 297 AI+A++SQM LTRLS H + V+ REYG+ CTF+F P +++R + D ++ + Sbjct: 281 AIEAIKSQMALTRLSNAHRVTVNLREYGKKRTDDCTFIFSPRITSRNGSSADWYSPGAFN 340 Query: 298 QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 W +++AG++HRKSY++RHT+ACW+L+ GANP F+A+QMGH+ AQM++ VYGKWM+E Sbjct: 341 GAWKTILRKAGVKHRKSYETRHTFACWALSCGANPNFVAHQMGHSSAQMLYNVYGKWMTE 400 Query: 358 NNNAQVALLNTQLSEFAPTMPHNEAM 383 NN+ QV +LN S+ AP +PH + + Sbjct: 401 NNDHQVNILNASFSQNAPQVPHEQII 426 >UniRef50_C6UV22 Site-specific recombinase, phage integrase family n=11 Tax=Escherichia coli O157:H7 RepID=C6UV22_ECO5T Length = 162 Score = 320 bits (819), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 155/160 (96%), Positives = 158/160 (98%) Query: 28 LEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEK 87 +EKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEK Sbjct: 1 MEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEK 60 Query: 88 LLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS 147 LLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS Sbjct: 61 LLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS 120 Query: 148 PLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTG 187 PLKESRTIPDPLSREEFIRLIDACRNQQAKNLWC +V +G Sbjct: 121 PLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCNTVLSG 160 >UniRef50_A2P3A8 Integrase n=3 Tax=Vibrionaceae RepID=A2P3A8_VIBCH Length = 412 Score = 311 bits (798), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 159/383 (41%), Positives = 232/383 (60%), Gaps = 17/383 (4%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 R+++C+AI+TG F Y + FP S+ ++ + ++D+TIKEL +++L LK EV ++ Y Sbjct: 46 RTAICHAIQTGQFIYKEWFPESKKANQYSD-KKDITIKELFDRWLDLKVIEVTPATIKNY 104 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 + +K + + E L S + +EKLLE+RK S T N YM Sbjct: 105 QQRVKQVYWHLPETTLVSEVTQEKLLELRKRFTETC--------------SPSTANTYMR 150 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVS 183 L +F F +++GY GI LK + P PLS EEF R+I+ C+++Q N W V+ Sbjct: 151 TLKGIFSFAINSGYSDPALLNGIKELKTQKRKPQPLSEEEFQRVIEHCQHEQDANFWTVA 210 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-KDRFTVPKTQAGTNRVIHLIKPAIDAL 242 VYTG+R GEL AL WEDIDL+NGT+ +RRNL + RF +PKT +G R ++L+ PA+ AL Sbjct: 211 VYTGLRHGELMALAWEDIDLENGTITVRRNLTLEGRFKLPKTISG-ERTVNLLNPALAAL 269 Query: 243 RSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDA 302 ++QM T + E IDV REYG+ ++Q VF P V+AR + ++ SI + W+ Sbjct: 270 KAQMKWTFMLPELEIDVLQREYGKLQRQFIRPVFSPSVTARYEVDNRYYHHVSIWEKWNM 329 Query: 303 AIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQ 362 KRA L +RK YQ+RHTYACW L+AGANP FIA QMGH+ A+ V+Q YG W+ ++ Q Sbjct: 330 LCKRAKLTYRKPYQTRHTYACWMLSAGANPTFIAKQMGHSSAKEVYQTYGDWVGDHTKGQ 389 Query: 363 VALLNTQLSEFAPTMPHNEAMKN 385 + +LN + AP P + K+ Sbjct: 390 LDMLNARYGNIAPYTPQGKESKS 412 >UniRef50_P76056 Putative lambdoid prophage Rac integrase n=30 Tax=Bacteria RepID=INTR_ECOLI Length = 411 Score = 305 bits (781), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 158/373 (42%), Positives = 235/373 (63%), Gaps = 7/373 (1%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 G LR+ + + I +G F+Y ++FP S K R T EL + + +KETE+ ++ Sbjct: 44 GNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTM 103 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 ++ +K + II E S I +L R ELL G + N + GR+ TV+N Sbjct: 104 KKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDN 163 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 Y+ L ++ +F +G+++ PF+G+ L+ +R PDPLS+ EF L+++ + Q ++NLW Sbjct: 164 YIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ-SQNLW 222 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-KDRFTVPKTQAGTNRVIHLIKPAI 239 +VY+G+R GEL AL WED+DL+ G + +RRNL D F PKT AG R + L++PA+ Sbjct: 223 KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGI-RTVTLLQPAL 281 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEV-SARVKNYGDHFTVDSIRQ 298 +AL+ Q LT ++ I + REYGRTEKQK FVF P V + + K Y ++V S+ Sbjct: 282 EALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPY---YSVSSLGA 338 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 W+AA+KRAG+R R Y +RHT+ACW LTAGANPAFIA+QMGH AQMV+++YG W+ + Sbjct: 339 RWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 Query: 359 NNAQVALLNTQLS 371 N+ Q+A+LN +LS Sbjct: 399 NDEQIAMLNARLS 411 >UniRef50_D0Z3D7 Putative integrase n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z3D7_LISDA Length = 428 Score = 277 bits (708), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 150/386 (38%), Positives = 224/386 (58%), Gaps = 9/386 (2%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFG--EARQDLTIKELAEKFLALKETEVAKT 58 G LR+ + I G F+Y ++FP+S+N + D ++ + E FL +K E+ ++ Sbjct: 44 GRLRAVIVSEIACGKFNYLERFPNSKNTLQISVQNPHVDCSLNDFIEHFLLIKSVELTES 103 Query: 59 SLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 S+ R+ +K ++G + L S+I ++ +R +LL G S T GRS TV Sbjct: 104 SIIRTRSGLKTCAKLLGGERLISNITHADIMSMRLKLLNGSNFSPSPIRRTSNGRSVKTV 163 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLID-ACRNQQAK 177 N Y+T +++F++ + NPF G+S L+ +T P+PL +EFIRLI+ +Q Sbjct: 164 NTYLTICSSLFKYAYRTEAIHTNPFDGVSRLRTVKTPPNPLEHDEFIRLINHPSIREQDV 223 Query: 178 NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD-RFTVPKTQAGTNRVIHLIK 236 NLW V+VYTG+R GEL AL WEDIDL T+ ++R + RF VPKT++G R I+L+ Sbjct: 224 NLWTVAVYTGLRHGELSALAWEDIDLVKRTITVKRTATQQKRFRVPKTESG-ERTINLLA 282 Query: 237 PAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQ-PEVSARVKNYGDHFTVDS 295 PA +AL Q T L ++V R+ +++CT+VF+ SA K + + Sbjct: 283 PAYEALVRQKACTFLYPSIAVEVESRQKRNHIQEQCTWVFRMTSYSAEAKG---NISTKV 339 Query: 296 IRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 I MW K AG+ +R YQ+RHTYACW L +GANPAFIA+QMGH+D MV VYG WM Sbjct: 340 ISNMWRKCTKLAGIAYRNPYQTRHTYACWLLNSGANPAFIASQMGHSDMSMVISVYGAWM 399 Query: 356 SENNNAQVALLNTQLSEFAPTMPHNE 381 NN +++A + QL+ AP+ PH + Sbjct: 400 PSNNESEIAKIERQLNCIAPSAPHQK 425 >UniRef50_A7MYL9 Putative uncharacterized protein n=3 Tax=Vibrio harveyi group RepID=A7MYL9_VIBHB Length = 411 Score = 255 bits (652), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 141/370 (38%), Positives = 214/370 (57%), Gaps = 13/370 (3%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQ---DLTIKELAEKFLALKETEVAKT 58 +LR+S+ I G FDY +FP+S+ + F Q +LT++EL + ++ LK+T +A Sbjct: 44 QLRASILSEISLGTFDYLSRFPTSKKAQLFATPEQRGKNLTVRELFDDYIQLKKTTMASQ 103 Query: 59 SLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 SL + IGE+ S+I L+ +K ++ P N +P RSA T+ Sbjct: 104 SLYVLNNTARACCLFIGEERTISNITIMDALKCQKLMVDS---PTRN---GRP-RSAKTI 156 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKN 178 NN + + F V + ++ DNPF + L PDPL EEF +LI++ N Q +N Sbjct: 157 NNMIKLMRRCFDLAVKSKFIDDNPFLHVELLSGGSGEPDPLELEEFHQLIESTTNLQQRN 216 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR-FTVPKTQAGTNRVIHLIKP 237 ++ +++YTG+R GELCAL WED+DL+ GT+ + RN+ +R FT PK + + R IHL++P Sbjct: 217 IFTLAIYTGMRTGELCALAWEDVDLEKGTIEVTRNVTIERKFTTPKNKK-SERTIHLLQP 275 Query: 238 AIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIR 297 A+ AL+SQ LT L I V + ++ FVF PE + + + + Sbjct: 276 ALLALKSQRKLTMLGPVRDILVEVKGSNTFRQESVQFVFIPE-HRNGQETSETYKTTTYN 334 Query: 298 QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 ++W A+KRAG+RHR SYQSRHTYACW +T GAN +FIA QMGH M+ +VYG++M Sbjct: 335 RLWSRALKRAGIRHRCSYQSRHTYACWLITKGANLSFIAEQMGHKSTMMLERVYGRFMKS 394 Query: 358 NNNAQVALLN 367 +++ Q+ LN Sbjct: 395 HSHEQIEYLN 404 >UniRef50_C6DJ77 Integrase family protein n=4 Tax=Enterobacteriaceae RepID=C6DJ77_PECCP Length = 255 Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 126/259 (48%), Positives = 178/259 (68%), Gaps = 11/259 (4%) Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQA 176 TV+NY+ L ++ +F +G+++ PF+GI L++SR PDPL + EF +LI + + Q+ Sbjct: 3 TVDNYIALLCSLLRFAHRSGFISGRPFEGIKKLQKSRPRPDPLLKHEFDQLIGSL-SGQS 61 Query: 177 KNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-KDRFTVPKTQAGTNRVIHLI 235 KNLW ++VYTG+R GEL AL WEDIDL G + I RNL F PKTQAG R + L+ Sbjct: 62 KNLWQLAVYTGLRHGELAALAWEDIDLDAGVIHISRNLTILGHFGPPKTQAGI-RTVTLL 120 Query: 236 KPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDH---FT 292 KPA++AL+SQM T + + I H REYG TE Q+ FVF P RV+N G+ ++ Sbjct: 121 KPALEALQSQMKTTGNKRTNDIVYHHREYGLTEIQRLRFVFLP----RVRN-GEQKISYS 175 Query: 293 VDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYG 352 ++ +W+ A+KR+G+R R Y +RHTYACW L+AGANP+FIANQMGH +AQMV+++YG Sbjct: 176 CGTMGSLWNTAVKRSGIRRRNPYHTRHTYACWLLSAGANPSFIANQMGHENAQMVYEIYG 235 Query: 353 KWMSENNNAQVALLNTQLS 371 KW+ + N QV +LN +L+ Sbjct: 236 KWIEDMNEDQVGMLNRKLA 254 >UniRef50_B0KSD4 Integrase family protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KSD4_PSEPG Length = 417 Score = 193 bits (490), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 116/363 (31%), Positives = 183/363 (50%), Gaps = 20/363 (5%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNT 62 LR+++ + IK G F+Y + FP+S++ + A+ D ++ LAE++ LK ++ + Sbjct: 57 LRAAILHEIKLGTFEYGRHFPNSKHATNYSNAK-DERLEALAERYKPLKAIDITPMTEEK 115 Query: 63 YRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 Y I ++++G LA + E + +R L+ R+ T N+Y+ Sbjct: 116 YAYAIDICVALVGGDRLAGILLPEDIHVLRARLIET--------------RAPSTANHYL 161 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLI-DACRNQQAKNLWC 181 + N Y + S PDPL+ +EF LI + C + Q Sbjct: 162 ATFAGFLTWCESNNYCMAGLAGACTRFAMSDKEPDPLTHDEFDLLISNGCLHPQDAAAIT 221 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD-RFTVPKTQAGTNRVIHLIKPAID 240 ++VYTG+RPGELCAL EDI+L+ G + I R + D F PKT G R + L++PA++ Sbjct: 222 LAVYTGLRPGELCALAVEDINLQAGKIEITRAITADGSFKTPKT--GKPRTVLLMEPALE 279 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 A R+ + + + I V+ + E T + P AR + + F + W Sbjct: 280 ACRTLLEIVMNHPKRDIRVYQNRHEWREIS-VTPLLSPSTQARKRGINEWFVSTAWNTKW 338 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 A +RAG+R R+ YQ+RHTYACW LTA N AFIA QMGH D M+ +VY KWM ++ Sbjct: 339 AAIQRRAGIRPRRPYQTRHTYACWCLTARGNLAFIAKQMGHKDFTMLVEVYAKWMDSESD 398 Query: 361 AQV 363 ++ Sbjct: 399 EEL 401 >UniRef50_A8T0M8 Putative integrase n=1 Tax=Vibrio sp. AND4 RepID=A8T0M8_9VIBR Length = 407 Score = 187 bits (474), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 116/365 (31%), Positives = 185/365 (50%), Gaps = 28/365 (7%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 R ++ Y IK G+F YA FP S E Q T E+ +K+L LK+ ++ ++ Y Sbjct: 51 RETIMYEIKIGIFRYAAHFPDS---PYATEQSQSRTFGEMVDKYLQLKQADLRSSTYKKY 107 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 ++ K + G S+++ E + E+R L+ G R A T+N Y Sbjct: 108 VSLFKITKNAYGANRSCSTLSPESVSELRALLIKG--------------RGARTLNTYFR 153 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVS 183 +N F + GY+ N + + +K +P + +E + +DAC +Q KN+ + Sbjct: 154 AINTFFGWLHKMGYVDRNFSEFMPSVKTPERNINPFTIDEINKALDACMQEQHKNMITLL 213 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR-FTVPKTQAGTNRVIHLIKPAIDAL 242 YTG+R GE+C L WED+D +N + IRR + R PKT R + L+ PA++AL Sbjct: 214 AYTGLRTGEICGLAWEDVDFENKVLTIRRATFESRGLKTPKTD--RERTVDLMPPALEAL 271 Query: 243 RSQMTLTRL--SKEHIIDVHFREYGRTEKQKCTFVFQPEVSARV--KNYGDHFTVDSIRQ 298 ++Q L+ KEH +++ + FVF P+ + + K D+F+ + + Sbjct: 272 QAQKKLSSHYPQKEHEVELADKT---IRLDNIRFVFNPKATENLNAKTPYDYFSKTAPNK 328 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLT-AGANPAFIANQMGHADAQMVFQVYGKWMSE 357 MW RAG+ +R YQ RHTYA W L+ A N A++A QMGH++ M+ VYGKWM Sbjct: 329 MWRNICIRAGIPYRNVYQLRHTYASWMLSYANVNIAYLAQQMGHSNFLMIASVYGKWMKN 388 Query: 358 NNNAQ 362 N ++ Sbjct: 389 KNASE 393 >UniRef50_Q1ZMG0 Phage integrase n=2 Tax=Photobacterium RepID=Q1ZMG0_PHOAS Length = 391 Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 114/362 (31%), Positives = 178/362 (49%), Gaps = 56/362 (15%) Query: 11 IKTGVFDYAKQFPSSRNLEKFG--EARQDLT-----------IKELAEKFLALKETEVAK 57 I G F+Y K F S+ EKF E R+ + + E A+ +LA K+ E +K Sbjct: 49 ITLGCFEYQKYFSQSKLCEKFRAMEHRERASSQYYNAPYSPNLAEFADIWLAEKKIEWSK 108 Query: 58 TSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIP--KSNYIVTQPGRS 114 VI K +L G + + SSI K+K+L+ R L Q+P K Y+ S Sbjct: 109 GHYIDVSGVIEKYLLPAFGNQKI-SSITKQKILKFRSIL---SQVPGRKGEYL------S 158 Query: 115 AVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQ 174 + +N+ MT L + D Y ++P+K I LK SRT+ DP +E ++A + Sbjct: 159 SSRINHIMTPLRQLLNEAADR-YDFNSPWKNIKALKVSRTVIDPFHLDEVESFLNAVPDA 217 Query: 175 QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHL 234 K + +TG+R GE+ L W+DIDL N T+ +++ L+++ KT++ + R I L Sbjct: 218 Y-KTYYTTRFFTGMRTGEIDGLQWKDIDLVNKTIKVKQALSRNELKELKTES-SYRDIDL 275 Query: 235 IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVD 294 I ID L+ ++ R++ TFVF + + G F Sbjct: 276 IDRVIDVLQ-------------------KHKRSKYTTSTFVF-------INSKGKPFCYP 309 Query: 295 SI-RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGK 353 + R +W + AGLRHR YQ+RHTYA L +G +P +IA QMGH+ M+F+VY + Sbjct: 310 VVSRTIWYPTLDAAGLRHRNPYQTRHTYATLLLASGESPEWIAKQMGHSTTTMLFRVYSR 369 Query: 354 WM 355 ++ Sbjct: 370 FV 371 >UniRef50_UPI0001BC493F putative integrase n=1 Tax=Neisseria mucosa ATCC 25996 RepID=UPI0001BC493F Length = 415 Score = 144 bits (362), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 105/357 (29%), Positives = 176/357 (49%), Gaps = 51/357 (14%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLN 61 +LR VC I GVFDYA+ FP S+ E E + T +E+AE +LA +++ ++L+ Sbjct: 46 KLREEVCTRIAIGVFDYAEFFPDSKRAE---ETERSPTFREMAEAWLA-TVNQLSHSTLS 101 Query: 62 TYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 YR ++ ++L IG+ SI++ ++ L G ++ SA T NN Sbjct: 102 RYRGMLNSHVLPKIGDM----SIDR-----IQYSTLAG--------LLATLDCSAKTRNN 144 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQA-KNL 179 T + F + +G + DNP + ++ K + PDP + EE ++ +N+ N Sbjct: 145 IATVIRQPFVLALRDGRIKDNPAQHLANAKVQKEPPDPFTLEEAEAILGYLKNEPVFHNY 204 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAI 239 + ++ ++G+R EL AL W+DID + + + + + KT + R I L A+ Sbjct: 205 FELAFFSGMRTSELIALTWQDIDFQRQCVCVNKASVAGKLKSTKTH--SYRDIELNSRAL 262 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIR-Q 298 +ALR Q T L+ ++ P+ G F D + + Sbjct: 263 EALRRQWQRTGLASGYVF------------------INPKT-------GSPFENDKVPWR 297 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 W AIK AG+R+RK Y +RHT+A +L AGANP ++A QMGH+ +M+ + Y +W+ Sbjct: 298 PWQHAIKIAGVRYRKPYNTRHTFATLNLMAGANPMWVARQMGHSTMKMLLENYSRWI 354 >UniRef50_A9KZM7 Integrase family protein n=4 Tax=Gammaproteobacteria RepID=A9KZM7_SHEB9 Length = 431 Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 104/360 (28%), Positives = 172/360 (47%), Gaps = 24/360 (6%) Query: 4 RSSVCYAIKTGVFDYAKQFPSS-RNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNT 62 R+++ I FDY FP S + +E G + + +L +++ AK++ Sbjct: 55 RNTILTEIAENRFDYIAHFPESIKAMEFAGILIERRNVANGVNHWLKIQDVTKAKSTSKN 114 Query: 63 YRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 YR+ K++++ G L S I++ LL + +L + G S TVN+ Sbjct: 115 YRSKSKHVINYFGGDQLISEISRSHLLMFQANML-------------KAGLSPKTVNDVF 161 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKES--RTIPDPLSREEFIRLI-DACRNQQAKNL 179 T + V+ ++G + NP IS ++ DP +R+E R+ D + N+ Sbjct: 162 TIVRGVWYVAFEDGIIRSNPLDRISNIERDTLEETADPFTRDELERIAADDTSRRGDINM 221 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAI 239 +TG+ E+ AL WEDID N T+ IRR ++ VPK + G RVI LI PA Sbjct: 222 IMFCCWTGLSLSEVIALAWEDIDTVNWTVNIRRARVLTQYKVPK-ERGRVRVIELIDPAK 280 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 + L QM T + ++V R+ T+ + FVF S + DH S+R+ Sbjct: 281 EWLIEQMQHTMMLPTIELEVKQRDNITTKNENIRFVFLNGKSGL--PWYDH----SVRRW 334 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 + ++R LRHR Q RHT+A L+ ++A Q+GH+D M+ + YGKW+ +++ Sbjct: 335 FTGILERTKLRHRGPNQCRHTFASQLLSNYVPLEWVARQLGHSDTTMIKKHYGKWIPKDS 394 >UniRef50_A6GR01 Phage integrase n=3 Tax=Proteobacteria RepID=A6GR01_9BURK Length = 450 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 105/387 (27%), Positives = 169/387 (43%), Gaps = 76/387 (19%) Query: 5 SSVCYAIKTGVFDYAKQFPSSRNLEKF---------------------GEARQDL----- 38 + + IK G F Y FPSSRNLEK RQ + Sbjct: 6 AGIVAEIKKGTFRYRSAFPSSRNLEKIEALETEQYQPTSPMVSIPMANQSVRQAVDNISS 65 Query: 39 ----TIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKE 94 T E A+KF+ E+ ++++ T R +++ L K + SSI K+ LLE R Sbjct: 66 SGHPTFTEFAQKFIEENESLWKRSNIRTKRDILEKWLIPQFGKRVISSITKQDLLEFRSV 125 Query: 95 LLTGYQIPKSNYIVTQPGR------SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISP 148 L PG+ SA +N+ MT++ V D + P++ I Sbjct: 126 LAKA------------PGKKPGTTMSASRINHVMTSVKQVLDEAADR-FNFTTPYQNIKR 172 Query: 149 LKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTM 208 ++ +T P + EE +I CR + ++ + V +TG+RPGE+ L W+ ID + + Sbjct: 173 MRIKKTDVTPFTIEEVEMIIKYCR-EDFRDYFTVKFFTGMRPGEIHGLKWKYIDFEKRLI 231 Query: 209 MIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTE 268 IR + D PKT A +NR I + +AL++Q +T ++ Sbjct: 232 TIRETIVDDYEETPKT-ADSNRDIQMAPQVYEALKAQWGVTGTKSPYVF----------- 279 Query: 269 KQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTA 328 C N G + ++W ++ GL+ R YQ+RHT+A L A Sbjct: 280 -ANC-------------NGGPLTNRNMSNRVWYPMLRSLGLKLRTPYQTRHTFATLMLAA 325 Query: 329 GANPAFIANQMGHADAQMVFQVYGKWM 355 G +P +IA QMGH+ +M+F+VY +++ Sbjct: 326 GESPEWIAFQMGHSSTEMLFKVYSRYV 352 >UniRef50_C6MG53 Integrase family protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MG53_9PROT Length = 361 Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 102/356 (28%), Positives = 174/356 (48%), Gaps = 46/356 (12%) Query: 6 SVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDL-TIKELAEKFLALKETEVAKTSLNTYR 64 S+ Y IKTG FDY + FP S+ ++F + R DL TIKE +L + ++ ++L Y Sbjct: 48 SIKYEIKTGTFDYNRHFPYSKKAKEFRKNRPDLYTIKEALISWLQRNQAKLQLSTLQDYN 107 Query: 65 -AVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 A+ +++ G + S + K+ E EL P SN +N +T Sbjct: 108 SAIYHHLIPTFGNLTI-SELTASKVKEWLSEL------PCSNK----------RKSNILT 150 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVS 183 L +F+ + + NP + L P+P ++EE I++++ Q AKNL + Sbjct: 151 PLRQMFEELYLDEIIDKNPLSRVKNLPNKTREPEPFTQEEIIKILNELTGQ-AKNLIQFA 209 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALR 243 Y+G+R EL AL W++++ + + I++ + + KT++G R + L A +AL Sbjct: 210 FYSGLRTSELIALCWKNVEFEQNRIFIKQAHVRGQLKDTKTKSG-KREVTLQPQAKEALL 268 Query: 244 SQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ-MWDA 302 +Q T K++ I H P+ KN IR+ +W Sbjct: 269 NQQAFT--GKQNQIVFH----------------NPKTKQPWKN------DQPIRKNVWIP 304 Query: 303 AIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 A+K+AG+++R YQ+RHT+A L+ G ++A QMGH D M+ +VYG+W+ ++ Sbjct: 305 ALKKAGIKYRNPYQTRHTFASMLLSRGEKLLWVAQQMGHKDWGMIIKVYGRWIPQS 360 >UniRef50_B0VUJ0 Putative integrase n=1 Tax=Acinetobacter baumannii SDF RepID=B0VUJ0_ACIBS Length = 356 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 106/362 (29%), Positives = 174/362 (48%), Gaps = 37/362 (10%) Query: 11 IKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKN- 69 I+ G F+ AK FP+S++L+K I A+ +L+ EVA ++ ++YR + N Sbjct: 22 IQLGQFNLAKHFPNSKHLKKN-------QISYYAQLYLSQTIKEVAPSTYDSYRGHVYNH 74 Query: 70 ILSIIGEKNLASSINK---EKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLN 126 I+ G+ N IN +K +EV KE L TV +T + Sbjct: 75 IIPKWGQTN-PKDINTNMLKKWIEVLKENLNN-----------------KTVREIVTRFS 116 Query: 127 AVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYT 186 + D + NPF+ I + PDP S+ E +++ + +NL +T Sbjct: 117 QIHAIWRDERQMPYNPFENIVIHQVDTPEPDPFSKVEIAMILNTETDLDIQNLLPCLFWT 176 Query: 187 GVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQM 246 G+ E + WEDIDL+ GT+ I R+ + + V R I L++PAI+AL+ Q Sbjct: 177 GLSMSEQIPIAWEDIDLEKGTIQISRSYVRGIYRV-TKNRRRKRRIKLLEPAINALKKQY 235 Query: 247 TLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKR 306 +T ++ I+V R+ +K FV+ ++ N HF +R W+ +K+ Sbjct: 236 QITGNARAKTIEVLQRDNKTKRTEKVRFVW---INHERSN---HFEYHELRYRWNKHLKK 289 Query: 307 AGLRHRKSYQSRHTYACWSLTAG-ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVAL 365 A +R R Q RHT+A LT+G P +IA Q+GH+D M+++ YGK ++E+ + Sbjct: 290 AKVRKRGINQGRHTFASQLLTSGQVPPEWIAEQLGHSDTSMIYKHYGKLIAEDMPDYITK 349 Query: 366 LN 367 LN Sbjct: 350 LN 351 >UniRef50_A7N7U1 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7N7U1_VIBHB Length = 341 Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 85/250 (34%), Positives = 129/250 (51%), Gaps = 5/250 (2%) Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQA 176 ++N ++T L AVF +G + NP GI LK + IP+P +++E +L +Q Sbjct: 85 SINEFLTILRAVFLRAERDGVVDRNPMNGIKNLKAIKPIPNPFTKKELSQLHQTLGCEQG 144 Query: 177 KNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIK 236 KN + VYTG+R EL AL WEDID +N +++RR + KT+ T R + L + Sbjct: 145 KNAVELDVYTGLRISELLALSWEDIDWENRVLLVRRAKVLQSYKTTKTKEST-RKVELNE 203 Query: 237 PAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI 296 AI AL+ Q LT + I V + +++ VF + + + F Sbjct: 204 LAIQALKRQWALTGQLEAVKISVLQDDNKSYIEERVHIVFYNSQTNQPFLHAAQFNNTFF 263 Query: 297 RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 R A +++AG+ HR Q RHT+A +LTAG +IA QMGHAD M+ YG+W+ Sbjct: 264 R----AFLEKAGVAHRGVGQLRHTFASQNLTAGIAKDWIAMQMGHADTSMIDDHYGQWIP 319 Query: 357 ENNNAQVALL 366 ++ ALL Sbjct: 320 ADSPNYSALL 329 >UniRef50_C1D584 Phage integrase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D584_LARHH Length = 416 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 98/370 (26%), Positives = 180/370 (48%), Gaps = 56/370 (15%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNL---EKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 R+++ AI+ G F YA FP S+ ++ A+ T+ ++L E + ++L Sbjct: 51 RAAILAAIENGTFVYAVTFPHSKKAVLAKRTPVAKYGKTLDAWMSEWLKRCERYLKSSTL 110 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 + Y+ I + L+ ++ ++++ + + + + R + N Sbjct: 111 HDYKT--------IAWRQLSPVFGNHQIGDIKRSDIRAW----CDGLTCSNKR----IAN 154 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGIS-----PLKESRTIPDPLSREEFIRLIDACRNQQ 175 ++ A +D+ + NP G + +KE DP + +E +++A + Sbjct: 155 ILSVFRASLTAAMDDELIDTNPLSGWTYRRREEVKEDDI--DPFTPDEQTAILEAL-PEA 211 Query: 176 AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK--DRFTVPKTQAGTNRVIH 233 N+ + +TG+R EL AL W+DID G + I + L + + PKT+A + R + Sbjct: 212 GCNMIRFAFWTGLRTSELVALEWKDIDWVGGKVSISKALTQRATKAETPKTRA-SRRFVT 270 Query: 234 LIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV 293 L++PA++AL +Q +T F E+GR T G+ +T Sbjct: 271 LLQPALEALMAQKAVT----------FFSEHGRVWIDPRT--------------GEPWTG 306 Query: 294 D-SIRQ-MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 D +IR+ +W A++RAG+R+R+ YQ+RHT+A L+AG +P ++ANQMGHA M+ +VY Sbjct: 307 DQAIRKTLWTPALRRAGVRYRRPYQTRHTFASMMLSAGESPVWVANQMGHASWTMIARVY 366 Query: 352 GKWMSENNNA 361 G+W+ +N Sbjct: 367 GRWIPNGDNG 376 >UniRef50_C4TVA5 Bacteriophage integrase n=3 Tax=Enterobacteriaceae RepID=C4TVA5_YERKR Length = 396 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/375 (26%), Positives = 176/375 (46%), Gaps = 53/375 (14%) Query: 11 IKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKET-EVAKTSLNTYRAVIKN 69 I+ G F+YA QFP S L FG + IK+ ++++++ E+ +++ ++ Y+ + + Sbjct: 63 IERGTFNYADQFPRSVRLNVFGNNQSSKHIKKYLDEYISICESRKLSPATIAGYKKCL-S 121 Query: 70 ILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVF 129 LS + E N++ + + K + G ++ + T+ N ++ L + Sbjct: 122 ALSSLHEVNVS-----DLTPAIVKNWIQGQKV------------ALKTIRNRLSFLGSAI 164 Query: 130 QFGVDNGYLADNP--------FKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWC 181 V +G L NP ++G ES + DPLS +E ++ N Q +NL+ Sbjct: 165 DEAVTDGLLPANPVSLVSASRYQGEDVRSESEYVVDPLSPDEAKAILSTAMNAQWENLFR 224 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDA 241 +++TG+R ELCA+ W+D+DL T + + KT+AG R I L A+ A Sbjct: 225 FALHTGMRSSELCAIRWQDLDLVGNTAHVITASVEGVIKGTKTKAG-RRKIELDSDALLA 283 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ-MW 300 +++Q + TF+ V K D+IR+ W Sbjct: 284 VKNQ------------------------KPFTFMLNKYVFHDPKTNEAWTGADAIRKKAW 319 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 +KRAG+R+R YQ+RHT+A ++ GAN ++A QMGH +M+F+ YG ++ E + Sbjct: 320 IPTLKRAGVRYRNPYQTRHTFATMHISQGANLFWLAGQMGHKGPEMLFRHYGSFLKEYSG 379 Query: 361 AQVALLNTQLSEFAP 375 + + +AP Sbjct: 380 MTEEVHQRSRTGYAP 394 >UniRef50_Q1QXU7 Phage integrase n=4 Tax=root RepID=Q1QXU7_CHRSD Length = 388 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 104/358 (29%), Positives = 168/358 (46%), Gaps = 33/358 (9%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNT 62 L + + Y I G FDYA+ FP SR L + T + +LA+K+ E+A +S Sbjct: 42 LVTIINYEIDAGTFDYARHFPESRRL-------HESTFGFYLDLWLAIKKNELAYSS--- 91 Query: 63 YRAVIKNILSIIGEKNLASSINKEKLLEVRK-ELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 YR + E ++ E+ ++ EL Q + ++ + T+ Sbjct: 92 YRGIASK-----AETHVRPRWGNEQADDIDHIELQDWIQKDLATHLANK------TIKEV 140 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDA-CRNQQAKNLW 180 ++ + F+ A +P GI+ PDP + E ++++ + Q NL Sbjct: 141 VSIMRQTFRLYATRNKKAFDPTLGINIRLPDDEDPDPFEKAEIRKILETPTKRVQELNLM 200 Query: 181 CVSVYTGVRPGELCALGWEDI-DLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAI 239 ++Y G R E AL WED+ D++ G + RR + + RF V KT+ T RV HL+KPA Sbjct: 201 KFAMYDGPRISEAQALAWEDVLDVEKGIIRYRRAVVRGRFKVTKTKRST-RVHHLLKPAR 259 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ- 298 +AL+ Q LT V R+ ++K VF +S G F ++IRQ Sbjct: 260 EALQEQFALTGNLPAQTYQVVDRDNRTVRQEKLRLVFLNSLS------GKPFYENAIRQR 313 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPA-FIANQMGHADAQMVFQVYGKWM 355 W +++AG+R+R Q RHT+ L+ G P +IAN +GH+ M+ + YGKW+ Sbjct: 314 FWKTHLEKAGVRYRGPNQCRHTFISQMLSLGVVPLHWIANHVGHSSITMIQRRYGKWI 371 >UniRef50_A5WDD8 Phage integrase family protein n=6 Tax=Proteobacteria RepID=A5WDD8_PSYWF Length = 401 Score = 127 bits (319), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 105/369 (28%), Positives = 172/369 (46%), Gaps = 46/369 (12%) Query: 11 IKTGVFDYAKQFPSSRNLEKFG--EARQDL------TIKELAEKFLALKETEVAKTSLNT 62 I G F+YA+ FP S K R++ + K+ AE + + KE E T Sbjct: 49 IVLGTFNYAQYFPKSDKASKMMALNDRKECINTSMPSFKQFAELWFSEKEIEWRDTYKRK 108 Query: 63 YRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 R +I L + +I K ++L R L ++ + V +P SA +N+ M Sbjct: 109 IREIIDMYLLPEFQGRPIDTIKKTEVLAFRSALA---KVTRGK--VKKP-LSAARINSIM 162 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCV 182 L + + Y +NP++ I LKE RT P + +E + I+ R + +N + V Sbjct: 163 VPLGMILK-EASKRYKFENPYEDIKSLKEPRTSIQPFTLDEVWKFINWVR-EDYRNYYLV 220 Query: 183 SVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDAL 242 +TG+R E+ L WE+ID ++I + L K + PKTQ + R I + DAL Sbjct: 221 RFFTGMRTSEIDGLTWENIDFDRREIVINQALVKGKIVPPKTQE-SYRAIQMSPWVYDAL 279 Query: 243 RSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDA 302 + Q +T Y R+E C+ +P D+ V+ +++W Sbjct: 280 KEQHKVT--------------YKRSEYVFCSHTGEP---------LDYNNVN--KRVWHP 314 Query: 303 AIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS----EN 358 +K GL+ R +YQ+RHT A L AG +P +IA QMGH+ +M+F Y +++ ++ Sbjct: 315 TLKALGLKKRNAYQTRHTAATLWLAAGESPEWIAYQMGHSTTKMLFNTYSRYVPNMTRQD 374 Query: 359 NNAQVALLN 367 +A AL+N Sbjct: 375 GSAFEALVN 383 >UniRef50_A9BYB6 Integrase family protein n=2 Tax=Comamonadaceae RepID=A9BYB6_DELAS Length = 375 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/377 (25%), Positives = 173/377 (45%), Gaps = 53/377 (14%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQD---LTIKELAEKFLALKETEVAKTS 59 +R+ + I+ G F FP S AR D +T+ +L ++L +K+ E+ ++ Sbjct: 40 MRAEILGKIERGTFVLGDYFPDS------PRARADVPSMTVGQLFGEWLDVKKPELQHST 93 Query: 60 LNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 +++Y+ +I+ VR++L+ + ++ + + T N Sbjct: 94 IHSYQ----------------QTIDSYHFDGVRRDLVGNFTFRSLKRLLARLPANPKTFN 137 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNL 179 N + L V ++G L + + I + + PDP + +E L+ + + A+N Sbjct: 138 NVASVLRQVLEYGYKAKILTEPLHESIEMRRRQKPEPDPFTLDEVEVLLSKMKAEAARNY 197 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAI 239 + + ++G+RP EL AL W +DL++GT+M+ L + R V T+ R + L A Sbjct: 198 FEFAFFSGLRPSELIALTWSKVDLRSGTVMVDSALTRGR--VKGTKTSEVRKVELPGRAR 255 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 DAL Q +++L+ GR VF ++N +DS Sbjct: 256 DALERQRKVSQLAG-----------GR--------VFLTVAGGELEN--TDMPLDS---W 291 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM-SEN 358 W A+K +G+RHR + Q+RHTYA L AG PA+ A QMGH +M + Y KW+ + Sbjct: 292 WKPAMKVSGIRHRDARQTRHTYATMMLMAGVTPAYAARQMGHG-IEMFLRTYSKWIDGAD 350 Query: 359 NNAQVALLNTQLSEFAP 375 A+ L++ +S P Sbjct: 351 KGAEQRKLDSFISASKP 367 >UniRef50_D0J3Y8 Phage integrase n=5 Tax=Burkholderiales RepID=D0J3Y8_COMTE Length = 394 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 110/369 (29%), Positives = 169/369 (45%), Gaps = 57/369 (15%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEV--AKTSL 60 LR + I G F YA FP S ++ + ++ L +K L +V + S Sbjct: 56 LRDEIRRKIAEGGFSYADYFPDSPRAA--APSKSNPLMETLLQKQLDTYARQVKNGQMSP 113 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 +TY K +I GE+ + K+ EV LL + V++ ++ + N Sbjct: 114 STYNGYAK---AITGER--MRRWHGLKVGEVLPSLLRDW--------VSEMDCTSKAIRN 160 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGIS-------PLKESRTIPDPLSREEFIRLIDACRN 173 +T L ++F+ +++ + NPF+ I+ K S + P S E ++ ACR Sbjct: 161 MLTPLRSLFEDALNDELIDFNPFERIALSKLIRQTAKASDYVVTPFSAAEREAILKACRP 220 Query: 174 QQAKNL--WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRV 231 + L W TG+RPGEL AL W IDL+ I N PKT AG R Sbjct: 221 DERPMLQFW---FETGLRPGELQALQWSHIDLERAIARIELNQVAGVIKGPKTAAGI-RD 276 Query: 232 IHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHF 291 + L A+ ALR+Q ++ L E I P G+ + Sbjct: 277 VELSAEALAALRAQRPISELKGERIW------------------LNPRT-------GEPW 311 Query: 292 TVDS-IRQ-MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQ 349 + D+ IR+ +W KRA + +R YQ RHTYA LTAGANP ++A+Q+GH D +MVF+ Sbjct: 312 STDAQIRKTLWQPVCKRAEVEYRNPYQVRHTYASALLTAGANPWYVASQLGHEDVEMVFR 371 Query: 350 VYGKWMSEN 358 YGK++ ++ Sbjct: 372 TYGKFIRDD 380 >UniRef50_C1SH90 Site-specific recombinase XerD n=2 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SH90_9BACT Length = 399 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 98/370 (26%), Positives = 163/370 (44%), Gaps = 50/370 (13%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEAR--QDLTIKELAEKFLALKETEVAKTSL 60 L S + I F Y FP S+ + + + D+ AE +L+ E+ VA ++ Sbjct: 50 LLSEIERKIAEKTFKYETYFPDSKYVRENQQLHLNSDMFFDTYAELWLSSIESSVAYSTY 109 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 TY + L+S ++ KL E++ + Y ++ SA T+ N Sbjct: 110 KTYSTAVSK---------LSSYFSRFKLSEIKPSHIQQY--------ISNSELSAKTIAN 152 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKN-- 178 Y+ +++F+ V + L+ NP K + + DP S EE ++D R Sbjct: 153 YLGVFHSIFESAVRDDLLSKNPCKHVKKPRVQTEKVDPFSIEEVSMILDWMRQHHPHMTI 212 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPA 238 ++ + YTG+R GE AL W DID K+ ++++R + K+R T+ RVI +I P Sbjct: 213 IFALGFYTGMRVGEAIALKWSDIDFKHHKIIVQRTITKNRIK-ESTKTADYRVIDII-PM 270 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFT--VDSI 296 +D EY +KQ + F V +YG+ FT + Sbjct: 271 LD----------------------EYLHFQKQ---YTFMKSEWVTVTSYGEPFTKTQNIT 305 Query: 297 RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 + +K GLR+R Q RH++AC L A +I N +GH+ QM+F+ YG ++ Sbjct: 306 EDYFKPCLKALGLRYRILNQMRHSFACMMLDAREEINWIKNMLGHSSLQMLFRKYGNRIN 365 Query: 357 ENNNAQVALL 366 N+ + LL Sbjct: 366 RNDGTRKGLL 375 >UniRef50_Q7N1I7 Similar to bacteriophage integrase n=8 Tax=Enterobacteriaceae RepID=Q7N1I7_PHOLL Length = 352 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 95/360 (26%), Positives = 173/360 (48%), Gaps = 57/360 (15%) Query: 11 IKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETE-VAKTSLNTYRAVIKN 69 I+ +F YA+ FP+S L+ FG + TIK+ +++L + ET ++ +++N Y+ Sbjct: 22 IERDIFIYAEFFPNSSRLKIFGNVNKGRTIKDYLDEYLKICETRNLSPSTINGYKKC--- 78 Query: 70 ILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVF 129 K S ++K ++E+ +L + + + + T+ N ++ L + Sbjct: 79 -------KTALSELHKIPVVELTPAILKTW--------IQKRSTALKTIRNNLSFLRSAI 123 Query: 130 QFGVDNGYLADNPFKGISPLK--------ESRTIPDPLSREEFIRLIDACRNQQAK--NL 179 V + ++ NP ++ + +S I DPLS E L+ A N+Q + NL Sbjct: 124 DEAVTDCLISMNPVNLVTASRYQTERIENDSEYIVDPLSPNEVTALLSAAGNKQKQWENL 183 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAI 239 + +++TG+R ELCAL W+DID T ++ KT+AGT R + L A+ Sbjct: 184 FLFAIHTGLRSSELCALRWQDIDFIGKTAHVQSAKVVGIIKGTKTKAGT-RKVELNTDAM 242 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFT-VDSIR- 297 AL +Q T + K +F+ + G+ + D+IR Sbjct: 243 SALLNQKAFTFM-------------------KGNVIFEDPKT------GEAWAGADAIRK 277 Query: 298 QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 + W +++AG+R+R YQ+RHT+A ++ G N ++A QMGH +M+F+ YG ++ + Sbjct: 278 KAWVPTLRKAGIRYRNPYQTRHTFATKHISQGVNLFWLAAQMGHKGPEMLFRHYGSYLKD 337 >UniRef50_A3D4Z5 Phage integrase family protein n=3 Tax=Shewanella RepID=A3D4Z5_SHEB5 Length = 392 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 95/356 (26%), Positives = 167/356 (46%), Gaps = 48/356 (13%) Query: 11 IKTGVFDYAKQFPSSRNLEKFGE---------ARQDLTIKELAEKFLALKETEVAKTSLN 61 +K G FDY FP+S +E F + A + A +L K E + + Sbjct: 49 MKAGSFDYRHHFPNSPKVEHFTQLAKLSQFHAAGGRMLFSAFANLWLDEKRVEWRASQIE 108 Query: 62 TYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 T +++ +++ +G K +A+ I K+ +L +R L +T SA +N+ Sbjct: 109 TVEGILRCHLIPAMGTKMIAT-ICKQDILGLRLSLC-------EVDALTNRSLSASRINH 160 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 MT L + + + P++ I L RT P S E R+I++ R+ + + Sbjct: 161 IMTYLRLILNEAAER-FGFQTPWRNIKALPMPRTDIQPFSLVEVYRIIESVRDD-FRPYY 218 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAID 240 V +TG+R GE+ L WE+ID N + IR++L + + KT + ++R I + +P + Sbjct: 219 TVRFFTGMRTGEIDGLTWENIDFTNRLIHIRQSLVRGSLGLTKTSS-SDRAIAMNQPVYE 277 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI-RQM 299 AL++Q LT++ + FVF GD + ++ +++ Sbjct: 278 ALQAQSELTKI-------------------RGKFVF-------CNRRGDALSHQNVTKRV 311 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 W ++ L R YQ+RHT A L AG +P +IA Q+GHA+ M+F+VY +++ Sbjct: 312 WYPLLESLALEKRNPYQTRHTAATLWLAAGESPEWIARQLGHANTGMLFRVYSRYV 367 >UniRef50_Q31DR3 Tyrosine recombinase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31DR3_THICR Length = 433 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 105/377 (27%), Positives = 165/377 (43%), Gaps = 54/377 (14%) Query: 11 IKTGVFDYAKQFPSSRNLEKFGEARQDLT--------IKELAEKFLALKETEVAKTSLNT 62 I G F+Y K FP+S L K +A L K+ E++ + E K + + Sbjct: 51 ITLGTFEYGKYFPNSSMLAKIEKATAKLVPGYTKTPLFKDFVEEWFSEMEPTWRKATADG 110 Query: 63 YRAVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGR-SAVTVNN 120 YR+ + K ++ GE + SSI K ++L+ R + G+ + T+N Sbjct: 111 YRSYLDKRLIPHFGEMEV-SSITKAEILKYRAHVAK-----------QSAGKLKSKTINK 158 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 ++ LN V D Y P I PLKE + DP S EE +++ R+ L Sbjct: 159 FIKCLNMVMNEAADR-YDFTPPHLNIKPLKEEKVHIDPFSIEEVNQILAQVRSDWRDYL- 216 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAID 240 V +TG+R GE+ L WE +D ++IR + R+ K G+ R I + Sbjct: 217 LVRFFTGMRTGEIDGLKWEHVDFSRREILIRETYSAGRWEYTKND-GSQREIEM------ 269 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 S + LSK F+E R K + F N+ +R++W Sbjct: 270 ---STLVYNTLSK------RFKE--RDPKSELVFCTGNGAPVHTPNF--------LRRVW 310 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS---- 356 + L++RK YQ+RHT A L AG NP +IA QMGH+ M+F VY +++ Sbjct: 311 RPLLSYLKLKYRKPYQTRHTAATIWLAAGENPNWIAKQMGHSTTSMLFTVYARYVPNLTR 370 Query: 357 ENNNAQVALLNTQLSEF 373 ++ +A LL + + F Sbjct: 371 KDGSAMERLLASNIDGF 387 >UniRef50_A4G7G1 Putative integrase n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G7G1_HERAR Length = 387 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 99/373 (26%), Positives = 174/373 (46%), Gaps = 54/373 (14%) Query: 11 IKTGVFDYAKQFPSSRNLEKFGEARQDL--TIKELAEKFLALKETEVAKTSLNTYRAVIK 68 ++TG+F YA FP SR+ A+ D T+ E +K+ A + E+ ++L+ Y+ + + Sbjct: 58 VRTGLFAYADYFPQSRH------AKPDHVGTVGEFMDKWYA--QLELKPSTLSEYKRMKE 109 Query: 69 NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAV 128 N K L R + +T I + + + S T NN + L AV Sbjct: 110 NFW-------------KPALGRKRVDKITHSDI--TTALKSGTWSSNRTRNNMLYMLRAV 154 Query: 129 FQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC---RNQQAKNLWCVSVY 185 F V +G + NP I + R PDP S E R+I + ++QQ N + + Sbjct: 155 FNLAVADGVIHKNPCATIENAQWQRKKPDPFSIVEANRIIASLHEKQHQQVANFYEFMFF 214 Query: 186 TGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQ 245 +G+R GE L W ++DL ++IR++ R + +T+ + R + L A+DAL+ Q Sbjct: 215 SGLRTGEGLGLDWANVDLHKRIVVIRQSFV--RGEMQETKTSSERTVKLTNRALDALKRQ 272 Query: 246 MTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIK 305 T L K GR T A+ +N + + W A+K Sbjct: 273 KAWTLLDKS----------GRVFHNPST----NRPWAKEQNISEPY--------WKPALK 310 Query: 306 RAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE-NNNAQVA 364 G+R+R+ Y +R TYA L +GA PA++A Q+GH+ ++ ++ Y W+++ +++ ++ Sbjct: 311 LLGIRYRRPYNTRATYATIGLMSGARPAYMAAQLGHS-LEVFYRDYADWIADQDDDREMG 369 Query: 365 LLNTQLSEFAPTM 377 + Q+ P + Sbjct: 370 KIEAQIGASIPVL 382 >UniRef50_A3JCU8 Phage integrase n=2 Tax=Marinobacter sp. ELB17 RepID=A3JCU8_9ALTE Length = 408 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 96/369 (26%), Positives = 171/369 (46%), Gaps = 65/369 (17%) Query: 11 IKTGVFDYAKQFPSSRNLEKFGE-----------------ARQDLTIKELAEKFLALKET 53 I G F+YA+QFP SRNL K A Q + + A+++ +E+ Sbjct: 51 ILLGAFNYAEQFPDSRNLNKLKNDGSGAGINDEGADPEVNAAQTPYVADFADQWF--QES 108 Query: 54 EVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGR 113 ++ S +T +N++SI+ + +L + ++ E+ K + + + + GR Sbjct: 109 KIQWRSSHT-----RNVVSIL-DSSLKPAFKNTRMAEITKADI----LAARTKMAKRRGR 158 Query: 114 SAV------TVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRL 167 A T+N+++T L + + + DNP++ I PLK R +P S E R+ Sbjct: 159 GASGLMAPKTINSHLTILRMIMTEASER-FEFDNPYRNIKPLKLQRVHIEPFSLAEVERI 217 Query: 168 IDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAG 227 R + +N + + YTG+R GE+ L W ++D + +++R L + KT G Sbjct: 218 CKYVR-EDYRNYYQLRFYTGMRTGEIDGLKWANVDFEKQEILVRETLIHGKTEYTKTD-G 275 Query: 228 TNRVIHLIKPAIDALRSQ-MTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKN 286 + R I + P +AL++Q + +LSK FVF R Sbjct: 276 SQREIPMFGPVYEALKAQHAAIGKLSK--------------------FVF----CNREGQ 311 Query: 287 YGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 DH V +++W ++ L R+ YQ+RHT A L +G NP ++A +GH+ +M Sbjct: 312 PLDHNNV--TKRVWYPLLEALKLTKRRPYQTRHTAATLLLASGENPEWVARVLGHSSTEM 369 Query: 347 VFQVYGKWM 355 +F+VY +++ Sbjct: 370 LFKVYSRFI 378 >UniRef50_A8HM00 Phage integrase n=5 Tax=Proteobacteria RepID=A8HM00_BURPS Length = 411 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 107/380 (28%), Positives = 168/380 (44%), Gaps = 68/380 (17%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSS-RNLEKFGEARQDLTIKELAEKFLALKETEVAKT--- 58 LR + I+ G F+Y + FP S R + ++T+ E + F+ VAKT Sbjct: 52 LRGEILRKIEMGTFNYGEYFPESKRAATPRAASPSEVTVGERLDDFMTQARKAVAKTRMS 111 Query: 59 --SLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAV 116 +L YR V+ + L +L++VR L + S+ VT Sbjct: 112 PSTLEGYRKVV--------DGRLRPRWGAVRLVDVRPADLRKWI---SDLDVT-----LK 155 Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNPFKGIS--PLKESRTIP-----DPLSREEFIRLID 169 T N + L +V +++ + +NP I L T P DP S +E IR I Sbjct: 156 TARNILGPLGSVLADALNDELIDENPLTKIDVRKLLSKTTRPSDYEVDPFSIDE-IRAIL 214 Query: 170 ACRNQ-----QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKT 224 A ++ A+NL+ + ++G+R EL AL W +DL G + +R KT Sbjct: 215 AAADELYPGGAARNLFQFAFWSGMRTSELIALDWLHVDLNAGVVRVRNAQVVGTMKTTKT 274 Query: 225 QAGTNRVIHLIKPAIDALRSQMTLTRLSKEH----IIDVHFREYGRTEKQKCTFVFQPEV 280 +AG V+ L+ A AL +Q +TR EH ++ H R + Sbjct: 275 KAGLRDVL-LLPSARAALEAQREVTR-GMEHNRVFVVPWHGRPWS--------------- 317 Query: 281 SARVKNYGDHFTVDSIR-QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQM 339 GD IR W +K+A +R+R YQ+RHT+A L+ G NP ++A QM Sbjct: 318 -------GDK----QIRVNCWTYVLKKAEVRYRNPYQTRHTFASMLLSRGENPLWVAQQM 366 Query: 340 GHADAQMVFQVYGKWMSENN 359 GH D +M+ + YGKW+ +++ Sbjct: 367 GHVDTEMITKTYGKWIPDSS 386 >UniRef50_Q2T7M7 Bbp50 n=13 Tax=root RepID=Q2T7M7_BURTA Length = 356 Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 75/275 (27%), Positives = 127/275 (46%), Gaps = 33/275 (12%) Query: 107 IVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIR 166 + +P + T+NNY++ L + V + + ++P + P K + PDP S EE Sbjct: 101 VANRPDLTGKTINNYLSVLRSALSLAVKDKLIVESPADAVPPAKHQKQPPDPFSAEESNS 160 Query: 167 LIDACRNQ----QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVP 222 +I AC + Q N+ +TG+R E+ L W +D +GT++I + + + Sbjct: 161 II-ACAERSYPGQVHNVTEFWFWTGLRTSEIYGLEWPHVDFASGTLLIAKAFVRGE-QMD 218 Query: 223 KTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHII-DVHFREYGRTEKQKCTFVFQPEVS 281 +T+ R++ L A+ AL+ Q T+++ + D + E E Sbjct: 219 RTKTKVARLVILNSRALAALQRQRAFTQMANGRVFHDPRYNEGWADE------------- 265 Query: 282 ARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGH 341 D F R W+ +KR G+R+R+ Y RH+YA L AG PAF A Q+GH Sbjct: 266 -------DAFR----RTYWEPMLKRLGIRYRRPYNMRHSYATAMLMAGMTPAFCAKQLGH 314 Query: 342 ADAQMVFQVYGKWM-SENNNAQVALLNTQLSEFAP 375 + +M Y KW+ + N+ ++A L +S P Sbjct: 315 S-VEMFLTTYSKWIDGDQNDLEMARLERAISSPEP 348 >UniRef50_C1SH28 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SH28_9BACT Length = 410 Score = 113 bits (283), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 90/356 (25%), Positives = 166/356 (46%), Gaps = 51/356 (14%) Query: 10 AIKTGVFDYAKQFPSSRNLEKFGEARQDL-TIKELAEKFLAL-----KETEVAKTSLNTY 63 AI G F+YA+ FP+S+ F R+ T E+AE++ K E+ +T+L Y Sbjct: 55 AILDGNFEYAEWFPNSKKCRLFNSVRKSHKTFAEVAEEWKEHVERLHKAGELKRTTLRNY 114 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 +K+IL + + + K L+ Y+ ++ +P S ++NN +T Sbjct: 115 MNSLKSILDYFAIYEMQN---------ITKSLVDDYKFE----LLDKP-LSKKSINNKLT 160 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACR--NQQAKNLWC 181 L +F + + GY+ N + +P ++ E +++ + N + ++ Sbjct: 161 PLRRIFDYAYEMGYIEHNVMDRVKNFTLELPEIEPFNQLEVQAILNHLQKNNPKFHAMFT 220 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDA 241 + +TG+R GE+ A+ W++ D + ++ + + R PKT+A + R++ L A+ A Sbjct: 221 ILFHTGMRIGEVLAMKWKNFDEMFCSYHVKEHFTEKRLDTPKTKA-SKRIVPLTDEAMKA 279 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHF-TVDSI-RQM 299 LR+ T + K F+F YGD + + D+I +Q+ Sbjct: 280 LRNHKQYTFM-------------------KSDFIF-------CNQYGDPWVSSDNIMKQV 313 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 W+ +K+ G+ +R YQ RHT+A S+ AG N A IA +MGH + + Y K++ Sbjct: 314 WEPMLKKLGIAYRIIYQCRHTHASLSILAGDNLAHIAERMGHKNVGTLITRYAKYV 369 >UniRef50_A4AD26 Prophage integrase n=5 Tax=Gammaproteobacteria RepID=A4AD26_9GAMM Length = 399 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 91/355 (25%), Positives = 163/355 (45%), Gaps = 47/355 (13%) Query: 11 IKTGVFDYAKQFPSSRNLEKFGEARQDL--------TIKELAEKFLALKETEVAKTSLNT 62 I G FDYA FP S N +F + + + T K A++++ + +NT Sbjct: 49 IVLGTFDYAAYFPESPNAARFADHDKQIEQRSAKTPTFKAFADQWMEENRIGWKPSYINT 108 Query: 63 Y-RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 ++ K+++ G + S+I+KE +L R +L +IP+ + V G SA +N Sbjct: 109 LEHSLSKHVIPAFGSVPM-SAISKEDILAFRNQLA---RIPRKDGSV---GLSAARINTV 161 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWC 181 M L + + + + DNP++GI LK RT +P + +E ++D R + Sbjct: 162 MVPLRQIMREASER-FGFDNPYQGIKLLKVPRTKVEPFTLDEVKAVLDGVREDFHAYM-T 219 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDA 241 V +TG+R GE+ L W+ ID K +++R + T KT+ + R I + A Sbjct: 220 VRFFTGMRTGEIHGLKWKYIDFKQRMILVRESYVAGAMTDTKTEE-SARDIPMSDEVYAA 278 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI-RQMW 300 L++Q T G+ + CT G+ +++++ +++W Sbjct: 279 LKAQHKRT---------------GKLDLVFCT------------GSGEPLSINNVCKRVW 311 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 + + R YQ+RHT A L AG NP ++A +GH+D+ + + Y +W+ Sbjct: 312 YPLLALLKIPKRPPYQTRHTAATLWLAAGENPLWVAQILGHSDSAITHKRYARWI 366 >UniRef50_D1B4J0 Integrase family protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B4J0_SULD5 Length = 359 Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 88/323 (27%), Positives = 155/323 (47%), Gaps = 56/323 (17%) Query: 39 TIKELAEKFLALKETEVAKTSLNTYRAV---IKNILSIIGEKNLASSINKEKLLEVRKEL 95 T++ ++K+LAL+E ++ +YR V ++ I G+K + SI K + KE Sbjct: 60 TVRYYSQKYLALQE------NMKSYRYVECRVEAINKAFGDKTI-DSITKLNI----KEW 108 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 L ++I ++ NY+ L +FQ D+ +A N +S + + Sbjct: 109 LNSFKIKN------------ISKKNYLVALKGIFQVAYDDEVIAKNIASEVSIGRYEQVE 156 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 DP S EE RL+ A N + KN ++ TG+R GE+ L +DID ++ I+R ++ Sbjct: 157 ADPFSEEEVSRLL-AYANDEFKNYLGIAFNTGMRIGEILGLMLQDID--EDSISIKRAVS 213 Query: 216 KDRF--TVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCT 273 ++ T PKTQ ++ P +DA R + + R +++ Sbjct: 214 RNSKEPTTPKTQKSIRKI-----PILDACRPYLE--------------DQIRRAREKRTM 254 Query: 274 FVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPA 333 F+F EV+ K Y D D++++ W + +KR+ +RHRK Y +RHT+A L +G Sbjct: 255 FLFMSEVTG--KFYHD---ADALKKKWLSVLKRSKVRHRKLYNTRHTFATAMLRSGKVSV 309 Query: 334 F-IANQMGHADAQMVFQVYGKWM 355 +A +GH +++MV Y ++ Sbjct: 310 LTVAKMLGHTNSKMVLTTYSGFI 332 >UniRef50_D1RC05 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RC05_9CHLA Length = 369 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 51/278 (18%) Query: 74 IGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGV 133 IG+ L + I+ + + + R+EL G K+ RS TVN Y+ L+ VF +G+ Sbjct: 102 IGKYGL-TKISSDLIAQCRQELAEGVTSKKTK-------RSHATVNRYLATLSTVFTYGI 153 Query: 134 DN-GYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCV---SVYTGVR 189 + G++ DNP + +S ES+ ++ EF RL + C+N + ++L V +V TG+R Sbjct: 154 NECGWITDNPCRRVSKFTESKGRDRIVAENEFTRLFEECKNSRNEHLLPVVVLAVTTGMR 213 Query: 190 PGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLT 249 GE+ L W+ I+L T++++ +T+ G R + ++ A++ LRS Sbjct: 214 RGEILGLTWDCINLDRQTIILK-----------ETKNGKQRTVSIVGEALELLRS----- 257 Query: 250 RLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGL 309 H+++ +VF + F IR+ WD A+KRAG+ Sbjct: 258 ----------HYQK----RNPNTPYVFPAK---------KRFGKICIRKAWDEALKRAGI 294 Query: 310 RHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 ++ + + RHT+ ++ GA+ +A MGH QMV Sbjct: 295 QNLRIHDLRHTFCTYASETGASILELAAAMGHQTLQMV 332 >UniRef50_A1TPL3 Phage integrase family protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TPL3_ACIAC Length = 403 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 102/383 (26%), Positives = 169/383 (44%), Gaps = 50/383 (13%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLT--IKELAEKFLALKETEVAKTSL 60 LR+++ I G F +A+ FP +NL A + + ++ A+ + L + +S Sbjct: 47 LRATIVEEINQGKFRFAEHFPDYKNLTAVQPATDEESRLFRDWAKVWGRLSARGLEHSSH 106 Query: 61 NTY-RAVIKNILSIIGEKNLASSINKEKLLEVRK-ELLTGYQIPKSNYIVTQPGRSAV-- 116 Y R + L + G + E++ V E L P+ + + R+ Sbjct: 107 AVYLRHLAAYWLPVFGH------LPPERITHVMVLERLADLSAPRLDEKTGKTRRALARK 160 Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQA 176 T NN + L VF+ +P GI K + +PDP S +E + +I +QA Sbjct: 161 TQNNILIPLRGVFELICKARTEVVDPTDGIDNQKVQKAMPDPFSPDE-VEVILRALEEQA 219 Query: 177 KNLWC----VSVYTGVRPGELCALGWEDIDLKNGTMMIRRN--LAKDRFTVPKTQAGTNR 230 + W S + G R E AL WED+D ++ T ++ R L KD+ +T+ R Sbjct: 220 GSTWADYFEFSFFAGFRASEQIALLWEDVDHRSRTALVWRTRVLTKDK---DRTKTNVER 276 Query: 231 VIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDH 290 + L A +A+R R+ RTE + P N G Sbjct: 277 QVELNDRAYNAIR------------------RQRARTEAAGREVFWNP-------NTGKP 311 Query: 291 FTVD-SIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQ 349 F + S R++W AA+++AG+R+R + R T +L AGANP ++A Q GH+ Q++ + Sbjct: 312 FIDEQSQRRVWRAALRKAGVRYRAPKECRDTSVTLALMAGANPMWVALQHGHS-VQVMMR 370 Query: 350 VYGKWM-SENNNAQVALLNTQLS 371 Y KW+ S + A A +N +S Sbjct: 371 DYAKWIPSADRGANRAAVNAAIS 393 >UniRef50_A8FW51 Putative pore-forming cytotoxin integrase n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FW51_SHESH Length = 381 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 82/324 (25%), Positives = 151/324 (46%), Gaps = 33/324 (10%) Query: 42 ELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQI 101 + A+++LA + + A ++ + + +KN++S G+K + SI++ + + ++ + Sbjct: 10 DYAKQYLAESKFDKAHSTYVSECSKVKNLVSFFGKKQI-RSISQSDIKRWKIKVHRRF-- 66 Query: 102 PKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSR 161 S T+N + T L A+F + + L NP G+ LK P PL R Sbjct: 67 ------------SNKTINEHFTILRAIFSCALSDCVLGRNPMTGVENLKIHTAEPKPLGR 114 Query: 162 EEFIRL-IDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFT 220 EE ++L + + K L + V TG+R EL AL W+ ID ++ + + ++ Sbjct: 115 EELLKLHATPAQCESGKALLFLGVLTGLRISELIALTWDCIDFESREIKVHTAKVLGKYK 174 Query: 221 VPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVF---- 276 VPKT + R + + + A L+ +T + +I V + EK++ +F Sbjct: 175 VPKTTSSI-RTVEMNQHAFALLKKHYEVTGSLRPRVIRVLQNDNKTIEKRRVQHLFINSQ 233 Query: 277 --QPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAF 334 +P + + K Y F + + +A ++HR Q RHT+A LTAG + + Sbjct: 234 SNKPFIDS--KQYSKTF--------FTPFLVKASVQHRGPNQLRHTFASQCLTAGISKEW 283 Query: 335 IANQMGHADAQMVFQVYGKWMSEN 358 IA Q+GH MV + Y +W+ + Sbjct: 284 IARQLGHNSTNMVDKHYARWLQSD 307 >UniRef50_A0KWT4 Phage integrase family protein n=5 Tax=Gammaproteobacteria RepID=A0KWT4_SHESA Length = 407 Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 96/362 (26%), Positives = 157/362 (43%), Gaps = 49/362 (13%) Query: 11 IKTGVFDYAKQFPSSRNLEKFGEARQDLTIKE-LAEK--------------FLALKETEV 55 I+ F + FPSS +F E D+ +++ LAE F V Sbjct: 49 IRLNRFVFKSYFPSSSRCSQFSEY--DIRVQQHLAENVEPLTVNIMSNIPTFEEFVGEWV 106 Query: 56 AKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQ--IPKSNYIVTQPGR 113 + + ++ KNI II E L + +L E+ + L ++ I S T Sbjct: 107 VENKIQWKKSHCKNIQMII-ECYLLPAFGHIRLNEITRPSLIKFRASIADSRRTGTTEKL 165 Query: 114 SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRN 173 S +N+ MT L + + PF I PL+ +T+ +P S E ++ R+ Sbjct: 166 SNDWINHVMTPLRGILNEAALR-FDFPTPFVNIKPLRIDKTVIEPFSLAEVQYFLEHIRD 224 Query: 174 QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIH 233 +N + V +T +R E+ L W+ ++L ++I+ L PKT A + R I Sbjct: 225 D-FRNYYTVRFFTAMRTAEIDGLKWQFVNLDRYEILIQETLVDGYVETPKTSA-SYRSIQ 282 Query: 234 LIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV 293 L +P +DAL+ Q +T T+VF N +H V Sbjct: 283 LSQPVVDALKRQRKVT--------------------GNKTYVF----CNASGNPLEHRNV 318 Query: 294 DSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGK 353 +++W A+ L+ R+ YQ+RHT A L AG NP +IA QMGH+ +M+F+VY + Sbjct: 319 --TKRIWYPALDEMCLKRRRPYQTRHTCATLWLAAGENPEWIAKQMGHSTTKMLFEVYSR 376 Query: 354 WM 355 ++ Sbjct: 377 YV 378 >UniRef50_Q87MU5 Putative pore-forming cytotoxin integrase n=2 Tax=Vibrio RepID=Q87MU5_VIBPA Length = 370 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 74/251 (29%), Positives = 127/251 (50%), Gaps = 20/251 (7%) Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRN--Q 174 T+N ++T L + V +G +A NP G+ K P+P +++E R+ + C+N Sbjct: 74 TINEHLTILRRISLKAVRDGVIARNPMTGVQNFKTVDPEPNPFTKKELARMHE-CKNVCT 132 Query: 175 QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHL 234 Q +N +++ TG+R EL AL W+DI+ + + +RR + + PKT+ G+ R + L Sbjct: 133 QGQNAVMLNLLTGLRISELIALSWQDINWEREVLYVRRACVLNIYKCPKTK-GSVREVDL 191 Query: 235 IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVF------QPEVSARVKNYG 288 A+ L+ Q+ LT + I++ + K +F+F QP A K + Sbjct: 192 NPLALKLLKEQLKLTGKRRPQTINILECDNKTFTKDSVSFIFLNTKTNQPFTDA--KEFT 249 Query: 289 DHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVF 348 + F + + Q AG+ HR Q RHT+A LT G + ++A QMGH M+ Sbjct: 250 ERFFIKFLEQ--------AGVAHRGVGQLRHTFASQCLTTGISKDWLAVQMGHKSTTMID 301 Query: 349 QVYGKWMSENN 359 + YG+W+ E++ Sbjct: 302 KHYGRWIREDS 312 >UniRef50_D0S8U2 Phage integrase n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0S8U2_ACIJO Length = 386 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 78/262 (29%), Positives = 120/262 (45%), Gaps = 33/262 (12%) Query: 107 IVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIR 166 I+ + ++A T+NN + L VF ++N ++ +NP I K IPDP SR E Sbjct: 140 IIDRDFKTAKTLNNCLIPLRGVFDCAMENKFITENPLDSIRNKKVQVDIPDPFSRPEMDA 199 Query: 167 LID----ACRNQQAKNLWC--VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFT 220 +++ + + W ++ +TG RP EL AL D D +G M + N ++ R Sbjct: 200 ILENLKTTLKGDEILYYWYYELAFWTGCRPSELIALKESDFDFFSG--MFKVNKSRVR-G 256 Query: 221 VPK--TQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQP 278 V K T+ T R + L + ++ L + K+ I + + P Sbjct: 257 VEKNVTKTHTAREVCL---NARSKKAAQELIKYKKDRNIQSKY------------LMLCP 301 Query: 279 EVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQ 338 E F R AA+K G+RHR +Y +RHTYA L G NP F++NQ Sbjct: 302 ETGE------PFFNEKPPRNRLVAALKACGIRHRPAYNARHTYATMMLMDGLNPVFVSNQ 355 Query: 339 MGHADAQMVFQVYGKWMSENNN 360 MGH+ QM+ + Y KWM + N Sbjct: 356 MGHS-LQMMMKRYAKWMHGDKN 376 >UniRef50_C0VGS2 Phage integrase n=2 Tax=Acinetobacter RepID=C0VGS2_9GAMM Length = 402 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 76/279 (27%), Positives = 128/279 (45%), Gaps = 39/279 (13%) Query: 114 SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRN 173 SA T N+ + L F+ D+ + NP + K T PDP + E R+++ R Sbjct: 152 SAKTRNDALIPLRGAFELANDDEIIDKNPCDRLKNQKTQETEPDPFNEIERERILNWLRE 211 Query: 174 QQAKNL------WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAG 227 + + + V+ +TG RP E+ AL W+D+D N + I + + T+ Sbjct: 212 KYLADYPTVYWYFVVAFWTGCRPSEIIALTWQDVDFLNKQIHINKGRV-NGVQQETTKTN 270 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 R + L A +A + LT L EH+ F+ Sbjct: 271 KARFVDLNDFAFEAFQQLRLLTYLKYEHV-----------------FI--------CDET 305 Query: 288 GDHFTVD-SIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 G+ FT S+ + + AA+K G+R+R +Y +RHTYA L G NP ++A+Q+GH+ M Sbjct: 306 GEEFTTQKSLSEKFVAALKANGIRYRPAYNTRHTYATVCLMNGLNPVYVASQLGHS-LVM 364 Query: 347 VFQVYGKWM-SENNNAQVALLNTQLSEFAPTMPHNEAMK 384 + + Y KW+ S+ N ++A ++S A +P + +K Sbjct: 365 LMKRYAKWINSDKNKEEIA----KISNSAKIVPKKKGIK 399 >UniRef50_Q17VL1 Bacteriophage-related integrase n=4 Tax=Helicobacter RepID=Q17VL1_HELAH Length = 378 Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 90/334 (26%), Positives = 145/334 (43%), Gaps = 51/334 (15%) Query: 38 LTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLA--SSINKEKLLEVRKEL 95 +TI E ++FL LK + TSL++ V +I S +G K A I KE + + ++ Sbjct: 87 ITILEALKRFLGLK-IGLKNTSLHSLEIVFNSIFSAMGLKESAKLQKITKEAIAKYHEQA 145 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS--PLKESR 153 L Y K N + TQ NL + F GYL NP+ ++ KE++ Sbjct: 146 LQRY---KKNTLKTQHA-----------NLKSFLAFCESEGYLEKNPYFAVTLKNAKEAK 191 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 I +P S EE +I + K V+ TG+R GE AL WEDID + T+ I ++ Sbjct: 192 KI-EPFSLEEVEAIIKNAPSLSLKAFLMVAFLTGMRTGEQLALTWEDIDFDHQTISINKS 250 Query: 214 LAK-DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKC 272 L + + T PK Q + R + L++PA L +E ++E Sbjct: 251 LNEWGQITSPKNQ-NSVREVDLLEPAAKIL-------------------KELKKSEPAGK 290 Query: 273 TFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANP 332 FVF G ++ + +K L+ RK Y +RHT+A L+ G P Sbjct: 291 KFVF----------IGMPRRTSVFQRRFRELLKALDLKDRKLYTTRHTFASLMLSQGEEP 340 Query: 333 AFIANQMGHADAQMVFQVYGKWMSENNNAQVALL 366 +++ +GH D + Y ++ + + + L Sbjct: 341 MWVSKMLGHKDLNTTYGAYSHYIPQQDRERAKFL 374 >UniRef50_Q12GK7 Phage integrase n=11 Tax=Proteobacteria RepID=Q12GK7_POLSJ Length = 471 Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 98/388 (25%), Positives = 169/388 (43%), Gaps = 66/388 (17%) Query: 11 IKTGVFDYAKQF--------PSSRNLEKFGEARQD----------LTIKELAEKFLALKE 52 I G FDY K F P +++ AR D E A+++ Sbjct: 51 IALGTFDYEKTFGKPLPQPEPKTKDGSVDRTARSDGLPVLSRNGTPLFGEFAQQWF---- 106 Query: 53 TEVAKTSLNTYR-----AVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYI 107 TEV + +YR A+ K +L G+K + I K +L R L K Sbjct: 107 TEVEVSWRRSYRITQKGALDKYLLPFFGDKEVGH-ITKADVLAFRASLA------KVTTR 159 Query: 108 VTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRL 167 +Q S VN M L + D + ++ F+ I PLK R+ P + +E + Sbjct: 160 KSQGTLSNRRVNAVMKPLRQILNEAADR-FEFNSAFRNIKPLKMKRSDVQPFTLDEVELI 218 Query: 168 IDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAG 227 ++ R +N + V +TG+R GE L W+ +D + +++R ++ + KT G Sbjct: 219 LNTVR-VDYRNYFNVRFFTGMRTGEAHGLKWKYVDFERRLILVRESIVLNEEDELKTD-G 276 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 + R IH+ + DAL++Q E++ C+ QP + N Sbjct: 277 SVRDIHMSQVVYDALKAQYQAAGEFSEYVF--------------CSRSGQP-----INNQ 317 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 + + ++W+ ++ GL HR++YQ RHT A L +G P +IA Q+GH +M+ Sbjct: 318 ------NFLNRVWNPLLRHLGLEHRRAYQMRHTAATLWLASGEAPEWIARQLGHTSTEML 371 Query: 348 FQVYGKWMS----ENNNAQVALLNTQLS 371 F+VY +++ ++ +A LL +++S Sbjct: 372 FRVYSRYVPNLTRQDGSAMERLLASRMS 399 >UniRef50_A8ZS80 Integrase family protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZS80_DESOH Length = 403 Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 151/348 (43%), Gaps = 58/348 (16%) Query: 26 RNLEKFGEARQD-------LTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEK 77 RNL ++G+ +T E+A+++ ++ + EV ++ Y + + +IL + Sbjct: 53 RNLVEYGQLDAPEKVDYDVITFGEVAKEWASIHKKEVRYSTWPDYVSSMNGHILPNFKDM 112 Query: 78 NLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGY 137 +A I +L+ R L G A NN + + +VF + G Sbjct: 113 PIAE-ITYGDVLKFRSGLKVG----------------AKRANNILVPMKSVFDYADREGI 155 Query: 138 LADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALG 197 + DN + I L E P S +E RL+DA L V+ +TG+R GE L Sbjct: 156 IQDNVMRKIKRLSEEAPEIHPFSYDEVNRLLDAVHPWYQPYL-IVAFFTGMRAGEQNGLC 214 Query: 198 WEDI--DLK-NGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKE 254 W D D++ + IR+ + +PKT+ + R I + ++AL Q LT +K Sbjct: 215 WSDFLEDMQPEPRIFIRKTYVYKKDGIPKTKK-SKRYIKCLPQVLEALSEQRKLTGKNKH 273 Query: 255 HIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIR-QMWDAAIKRAGLRHRK 313 + + G T D IR ++W A+++AG+ +R Sbjct: 274 IFLTID---------------------------GRRMTPDHIRKEVWIPALEKAGIEYRP 306 Query: 314 SYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNA 361 Q+RHT+A L+AG + ++ N +GH+ QM+FQ Y W+ E + Sbjct: 307 PIQTRHTFATMMLSAGEDIGWVQNMLGHSSLQMIFQRYYAWVPEKTRS 354 >UniRef50_C4LFZ6 Integrase family protein n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LFZ6_TOLAT Length = 394 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 95/360 (26%), Positives = 157/360 (43%), Gaps = 54/360 (15%) Query: 11 IKTGVFDYAKQFPSSRNLEKFGEA--RQDL------TIKELAEKFLALKETEVAKTSLNT 62 I G F++ K FP+S E F + R++L + E AE + K+ E + Sbjct: 49 ITLGQFNFCKTFPNSSQCEYFHKIAHREELLKAGCPSFAEFAETWYQEKQVEWRTSQ--- 105 Query: 63 YRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGR-----SAVT 117 R I+NIL I +L S + + K + ++ NY+ GR SA Sbjct: 106 -RETIRNILDI----HLLPSFGLMPVNHIGKTEILSFR----NYVTQLKGRGDKQISASR 156 Query: 118 VNNYMTNLNAVFQFGVDNGYLADNP--FKGISPLKESRTIPDPLSREEFIRLIDACRNQQ 175 VN+ MT L + D D P +K I +K R+ PL+ E RL+ R + Sbjct: 157 VNHIMTPLRMILNEASDR---FDFPAVWKQIKSMKVPRSDVMPLTLAEIERLLLVVR-KD 212 Query: 176 AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLI 235 K + V +TG+R E+ L W +D + +++ + + KT G+ R + + Sbjct: 213 FKPYYTVRFFTGLRSSEIHGLTWRHVDFERCQILVYQAYVRGELISTKTD-GSYREVQMS 271 Query: 236 KPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDS 295 +AL +Q ++ + ID FVF V +++ + Sbjct: 272 LRVYEALLAQYKMS--GQNRSID--------------DFVFCSSVGTALEDR------NV 309 Query: 296 IRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 ++W + GL RK YQSRHT A L++G +P +IA Q+GH M+F+VY +++ Sbjct: 310 ANRVWYPLLALLGLEKRKPYQSRHTTATLWLSSGESPEWIARQLGHVSTNMLFRVYSRYV 369 >UniRef50_D1CFY4 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFY4_THET1 Length = 363 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 84/320 (26%), Positives = 134/320 (41%), Gaps = 33/320 (10%) Query: 34 ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKN-ILSIIGEKNLASSINKEKLLEVR 92 AR +T+ E +L + + +V +L Y+ ++N I+ +G L + + L E+ Sbjct: 55 ARTRVTVAEFLSHWLEIIKPQVRPATLADYQNSVRNHIVPALGTIKL-TKLEPAHLQELY 113 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 +LL G SA TV N ++ + G L N P K S Sbjct: 114 SQLLA-------------KGLSAKTVRNIHGTIHKAIKDAARWGMLPRNVADIARPPKVS 160 Query: 153 RTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 R L+ E+ L+ AC + + L +++ TG R GEL L W DIDL+ G + I R Sbjct: 161 RQELQCLTPEQVRLLMQACAGTRYEPLLGLAIATGARQGELLGLRWADIDLQRGVVQITR 220 Query: 213 NLAKD-RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 L + F+ PKT +G R +H+ ++ LR +L + R + Q Sbjct: 221 QLTRQGTFSEPKTSSG-KRSVHVPVSTVELLRRHRSLQ-------LQERLSAGDRWQDQG 272 Query: 272 CTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGAN 331 F G ++ + W +++AGL + RHT A L G + Sbjct: 273 LVF---------ANTLGGPMDARNLIRAWHRILQQAGLPRMPFHSLRHTSASLLLRQGVS 323 Query: 332 PAFIANQMGHADAQMVFQVY 351 P I ++GHAD + QVY Sbjct: 324 PRLIQQRLGHADIAVTLQVY 343 >UniRef50_B2JUB3 Integrase family protein n=2 Tax=Burkholderiales RepID=B2JUB3_BURP8 Length = 273 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/271 (27%), Positives = 121/271 (44%), Gaps = 35/271 (12%) Query: 114 SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS-----PLKESRTIPDPLSREEFIRLI 168 +A ++N + L + Q VD+ L NP G + P +++ DPL +E +I Sbjct: 11 TAKRLSNIQSCLRSALQDAVDDEVLESNPLAGFTFTRNEPPRDADHA-DPLDAQEQAAVI 69 Query: 169 DACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGT 228 A R Q NLW ++T +R E+ AL W D+D T+ +R+ + + V Sbjct: 70 AAARVPQIANLWQFLMWTVLRTSEVIALKWSDVDWLRETVQVRKAITRAAKGV------- 122 Query: 229 NRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEV----SARV 284 ++ T T + + + +++ TFV E+ S R Sbjct: 123 ---------------AEDTKTLSGRRDVKLLAPAMAALMAQKEYTFVAGEEIFNRPSWRG 167 Query: 285 KNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADA 344 + G I W +K A +R+R YQ+RHTYA L+AG ++ANQMGH+D Sbjct: 168 REGGPWRHDHQIWDAWKTTLKDAKVRYRNPYQTRHTYASMMLSAGERKIWVANQMGHSDT 227 Query: 345 QMVFQVYGKWMSENNNAQVALLNTQLSEFAP 375 + + YG+W+ N++ Q +L FAP Sbjct: 228 TSIKRNYGRWIP-NSDPQAGSRAVEL--FAP 255 >UniRef50_C0QBZ6 Predicted bacteriophage P4 integrase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBZ6_DESAH Length = 386 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 85/332 (25%), Positives = 144/332 (43%), Gaps = 56/332 (16%) Query: 42 ELAEKFLALKETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQ 100 E+A ++ LK+T+V+K+++ YR V+ K IL G + + S +TG + Sbjct: 79 EIAVQWAELKKTKVSKSTIQEYRKVMNKYILPQFGNRRIDS--------------ITGLE 124 Query: 101 IPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLS 160 I +V++ T NN +T V +F + + NPF + +K + PLS Sbjct: 125 I---EVLVSKLKCGGKTKNNILTPFKDVMRFAKKHKLIQHNPFDDVDSIKRESSEIHPLS 181 Query: 161 REEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFT 220 E I+L + L+ +TG R GE AL W+ +DL NG + I + + + Sbjct: 182 LGE-IKLFLEHVPDYYRPLFTFLFFTGARFGEAAALKWKRVDLTNGMIHIAKTYVRGEYK 240 Query: 221 VPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEV 280 PKT+ G+ R + L IDAL Q +EH +D K FVF Sbjct: 241 DPKTK-GSIRTVKLSPIVIDALHQQ-------REHTMD------------KSEFVF---- 276 Query: 281 SARVKNYGDHFTVDSIR-QMWDAAIKRAGLRHRKSY---------QSRHTYACWSLTAGA 330 + G H S+ ++ +++AGL KS+ +R +Y SL Sbjct: 277 ---LNTLGRHIHPHSVNLHVFRPTLEKAGLSANKSFSAATRRSCKDTRSSYITNSLDNNE 333 Query: 331 NPAFIANQMGHADAQMVFQVYGKWMSENNNAQ 362 F+ Q+GH +M+ + Y + + ++ + Sbjct: 334 RMGFVQKQVGHTTTKMIVEHYYRHLPAPDDGK 365 >UniRef50_A4WAT6 Putative uncharacterized protein n=1 Tax=Enterobacter sp. 638 RepID=A4WAT6_ENT38 Length = 140 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 38/72 (52%), Positives = 53/72 (73%) Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 W++A+KRAG+R R Y + HT+ACW L+AGANP+FI N MGH +AQ V+++Y W+ N Sbjct: 56 WNSAVKRAGIRRRNPYHTPHTFACWLLSAGANPSFITNPMGHENAQRVYEIYATWIEALN 115 Query: 360 NAQVALLNTQLS 371 + QVA+LN L Sbjct: 116 SEQVAMLNPTLG 127 >UniRef50_C1SH59 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SH59_9BACT Length = 390 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 80/346 (23%), Positives = 144/346 (41%), Gaps = 46/346 (13%) Query: 11 IKTGVFDYAKQFPSSRNLEKF--GEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK 68 I F YA+ FP SR + ++ ++ A +L ++T + + TY + I Sbjct: 58 IDDKTFKYAEYFPESRVAKALPMADSSPQISFGTYAILWLDSQKTVFSHATFITYTSSIN 117 Query: 69 NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAV 128 N+L+ +N+ SI K +R + PK T+ N++ L+++ Sbjct: 118 NLLATF--ENM--SICDIKPAHIRTYIKNSEVSPK-------------TLKNHVGVLSSI 160 Query: 129 FQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNL--WCVSVYT 186 V++ + NP + S DPLS EE +++ ++ L + V+ +T Sbjct: 161 LSAAVEDDLIPKNPCTSVKLPHISSVEVDPLSLEEITMILNWMKSHHPNMLAFFAVAFFT 220 Query: 187 GVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQM 246 G+R GE+ L W DID + T+ I R + + +T+ +R + ++ + L Sbjct: 221 GMRTGEIMGLQWGDIDFNSHTITISRTITAGKLK-HRTKTADSRTVDILTELDEYLSYHK 279 Query: 247 TLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKR 306 T + E + F Y K T + I+ W +K Sbjct: 280 QFTYMKSEWL----FLTYENKPFNK--------------------TDNIIKTYWKPCLKA 315 Query: 307 AGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYG 352 G+++R YQ+RHT+AC L G N ++ +GH M+ + YG Sbjct: 316 LGIKYRTLYQTRHTFACLMLDVGENINWLKKMLGHKTLDMILRRYG 361 >UniRef50_Q2T3Q9 Bacteriophage integrase family protein n=5 Tax=Proteobacteria RepID=Q2T3Q9_BURTA Length = 190 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 91/175 (52%), Gaps = 27/175 (15%) Query: 183 SVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQA-GTNRVIHLIKPAIDA 241 + +TG+R EL AL W D+D K G ++++R L + T+ + R + L+ PA+ A Sbjct: 5 AFWTGLRTSELVALNWTDVDWKRGVIVVKRALTQTAKEAEDTKTRSSRREVKLLPPAMSA 64 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQ-PEVSARVKNYGDHFTVDSIRQMW 300 L +Q T L GR VFQ P +AR GD IR +W Sbjct: 65 LVAQKAHTYLQ------------GRE-------VFQDPRNAARWA--GD----SPIRIVW 99 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 +K+A +R+RK YQ+RHTYA L+AG +P ++A QM H++ ++Y +WM Sbjct: 100 TRGLKQAQVRYRKPYQTRHTYASMMLSAGEHPMWVARQMDHSNQNTTVRIYARWM 154 >UniRef50_B4RWG8 Phage integrase n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RWG8_ALTMD Length = 292 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 77/251 (30%), Positives = 115/251 (45%), Gaps = 40/251 (15%) Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNP---FKGISPLKESRTIP----DPLSREEFIRLID 169 T+N+ L A F V +G + +NP FK S +K ++ P + E +L Sbjct: 51 TLNSTFKVLRAAFSEAVVDGTITNNPLLGFKISSAVKRRKSKQKDKVQPFTLTELKKLA- 109 Query: 170 ACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL---AKDRFTVPKTQA 226 A ++ + + V TG+R GELCAL WE +DL+ T+ I N AK+ PKT+A Sbjct: 110 AFQDLRERTYIQVWAKTGLRSGELCALRWEHVDLERKTINIDENYVTYAKE-LGTPKTEA 168 Query: 227 GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKN 286 + R I L + + L+ I+ E K FVF S R Sbjct: 169 -SERTIQLDEETVSLLQ------------IL----------EPGKLPFVFHNSRSKR--- 202 Query: 287 YGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 +HF S+R++ G+ +R Y RHTYA ++ G N IA QMGH +M Sbjct: 203 --EHFDTYSLRRLLIKMCDECGVSYRHPYNLRHTYATMRISLGHNLWDIAKQMGHTSPKM 260 Query: 347 VFQVYGKWMSE 357 +F+ YG ++ E Sbjct: 261 LFETYGDYIEE 271 >UniRef50_C9RBE5 Integrase family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RBE5_AMMDK Length = 414 Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP-DPLSREEFIRLIDA 170 G SA TV LNA + V NG L NP + P K R +P PL+REE + A Sbjct: 160 GLSARTVRLVHVVLNACLKQAVKNGLLVRNPAEATEPPKLKRRVPVRPLAREEVEAFLKA 219 Query: 171 CRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL--AKDRFTVPKTQAGT 228 R ++ + +++ TG+R GE+ L WED+DL+ G + +RR+L AKD P+T G Sbjct: 220 ARGERLYPAFALALKTGLRRGEVLGLKWEDVDLERGVLRVRRSLVEAKD----PET--GK 273 Query: 229 NRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYG 288 R++ +P + R + LTR ++ + R ++K F ++ G Sbjct: 274 VRLV-FQEPKTEKSRRTVPLTR----DVVALLKSHKARQNEEKLYF------GEAYEDNG 322 Query: 289 DHFTVDSIRQMW--------DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMG 340 F + + +W + +K+AGL + + RHT+A L +G + +G Sbjct: 323 LVFCTELGKPIWPRNFLRAFHSVLKKAGLERHRFHALRHTFATLLLASGEELKNVQELLG 382 Query: 341 HADAQMVFQVYGKWMSENNNAQVALLNTQL 370 H VY + + + V L+ L Sbjct: 383 HERISTTADVYAEVLEDAKKKAVTRLDAFL 412 >UniRef50_Q4FUG6 Possible phage integrase n=1 Tax=Psychrobacter arcticus 273-4 RepID=Q4FUG6_PSYA2 Length = 357 Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 77/262 (29%), Positives = 121/262 (46%), Gaps = 32/262 (12%) Query: 114 SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRN 173 S T NN + L VF +D+ + NP I K PDP SR+E RL+ + Sbjct: 118 SEKTRNNNLIPLRGVFGIALDDSVIHTNPVDKIKNTKHQSPPPDPFSRDEMERLLTWLHD 177 Query: 174 QQAKN---LWC---VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAG 227 + K+ W ++ +TG+R GEL AL W+DID G + + + ++ D V +T+ Sbjct: 178 KHGKDEAVYWLYFELAFWTGMRTGELLALTWDDIDWDAGLIKVSKVMS-DGELVNRTKTA 236 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 R + + DAL+ L R+ K + D F +S R N Sbjct: 237 EYRDVFFNARSEDALKR---LKRI-KSAVSDRLF------------------MSPRFINS 274 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 T + R+ A+K G+RHR +Y +RHT+ LT G N F+A Q GH+ + + Sbjct: 275 AWQ-TDKTPRRALTEAMKATGIRHRATYTTRHTFITNCLTDGLNIYFVAKQTGHS-VRTL 332 Query: 348 FQVYGKWMSENN-NAQVALLNT 368 Y +W+ + +++A LNT Sbjct: 333 ETRYARWIDVSKARSEIAKLNT 354 >UniRef50_B1J5J4 Integrase family protein n=4 Tax=Pseudomonas RepID=B1J5J4_PSEPW Length = 396 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 72/249 (28%), Positives = 116/249 (46%), Gaps = 42/249 (16%) Query: 125 LNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCV-- 182 L ++FQ V + + NP I K + DP ++EE +I A + + + Sbjct: 155 LVSIFQQAVTDELIVRNPALSIPGAKVPKREVDPFTKEEADSII-AHLYETTSGMTAIYA 213 Query: 183 -----SVYTGVRPGELCALGWEDIDLKNGTMMI----RRNLAKDRFTVPKTQAGTNRVIH 233 YTG+RPGE+ AL W +ID + T + R + +DR T+ +R + Sbjct: 214 AYFEFCFYTGMRPGEVMALRWSEIDRRVKTANVCRIQIRGVIQDR-----TKTKRSRKVL 268 Query: 234 LIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHF-- 291 L A+ AL LT + + +VF P + + + F Sbjct: 269 LNDRALHALEKARPLT-------------------EARSDYVFAPSGTG---DRSEMFIR 306 Query: 292 TVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 + S ++ W AA+++ G+R R+ Y +RHTYA L AG NPAFIA Q+GH+ Q++ Y Sbjct: 307 SETSQKRYWLAALRKLGIRRRRMYDTRHTYATMCLMAGMNPAFIAAQLGHS-VQVLLSTY 365 Query: 352 GKWMSENNN 360 KW++ N+ Sbjct: 366 AKWINSPND 374 >UniRef50_C3EB65 DNA integration/recombination/invertion protein n=1 Tax=Bacillus thuringiensis serovar pakistani str. T13001 RepID=C3EB65_BACTU Length = 367 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 80/342 (23%), Positives = 152/342 (44%), Gaps = 39/342 (11%) Query: 43 LAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQI 101 AE +T + KT+L Y ++ +I+ ++G K + E + + L ++ Sbjct: 56 FAEWIQKYAKTNLQKTTLFNYIHILDTHIIPVLGNKKV------EDIKTIHLVTLFHGKL 109 Query: 102 PKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSR 161 P G + T+N+ T + +F+ + G++ NP G+S LK R P + Sbjct: 110 PAK-------GLATTTINSIHTRVKMLFKKACEWGFIKKNPMDGVSKLKNKRQELQPYDQ 162 Query: 162 EEFIRLIDACRNQQAKN--LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRF 219 +E ++++ ++ N L+ +++ TG+R GEL L W ID +N + I++ + + Sbjct: 163 KEIVKILALTEQEKDMNKMLFQLAIVTGMRRGELLGLEWGHIDFQNDMVHIQQTIVRAGK 222 Query: 220 TV----PKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFV 275 + PKT + + R+I I P T+L + +++Y ++ C + Sbjct: 223 EILLKEPKT-SKSKRIIS-IPPTFT--------TKLKQ-------YKKYCAEKRIACGDL 265 Query: 276 FQPEVSARVKNY--GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPA 333 ++ E + + G T + W ++ GLRH K + R T+A + LT G N Sbjct: 266 WEGEEHLFLFSTWNGRPLTPEKASTRWQYFTQKHGLRHIKLHGLRSTHATYLLTQGENLK 325 Query: 334 FIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAP 375 I+ ++GH+D Q +Y + E N T L+ P Sbjct: 326 VISERLGHSDIQTTMNIYAHVLEEVNKKASNHFETLLTHTMP 367 >UniRef50_C5T6H4 Integrase family protein n=2 Tax=Burkholderiales RepID=C5T6H4_ACIDE Length = 501 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 92/397 (23%), Positives = 163/397 (41%), Gaps = 72/397 (18%) Query: 11 IKTGVFDYAKQFPSSRNLEKF----GEARQ------DLTIKELAEKFLALKETEVAKTSL 60 I G F YA FP+S+ L + G+A Q + + A E Sbjct: 51 IAAGTFVYANYFPNSKALARLEKAAGQAVQIAVAPVGVEAQHTAGPLKVEAEPASPTPPF 110 Query: 61 NTY-------------RAVIKNILSIIG-------EKNLASSINKEKLLEVRKELLTGYQ 100 +T+ R+ +++++S + ++ S I K +L R L Sbjct: 111 STFALQWVEEHKIEWRRSHLRSLMSTLNGRLIPHFKEKAVSQITKSDILTFRATLA---- 166 Query: 101 IPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLS 160 K + G S +N + L + D + +P G+ L+ +T DP S Sbjct: 167 --KVKGRGDKEGLSPKRINEIIGTLGQIMDEAADR-FEFTSPMTGVKRLRVRKTDVDPFS 223 Query: 161 REEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN--LAKDR 218 + ++ R ++ + +TG+R GE+ L W +D + +++R L +D Sbjct: 224 LADVQSILTTVRADY-RDYFTTRFFTGMRTGEVHGLKWRYVDFERRLILVRETFVLGEDE 282 Query: 219 FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQP 278 +T KT G+ R I + +P DAL Q T +++ C QP Sbjct: 283 YT--KTD-GSQRDIQMSQPVFDALLRQREATGKLSDYVF--------------CNMAGQP 325 Query: 279 EVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQ 338 + KN+ D ++W ++ GL R+ YQ RHT A L +G P +IA Q Sbjct: 326 LDN---KNFSD--------RVWYPLLRHLGLTERRPYQMRHTAATLWLASGEAPEWIARQ 374 Query: 339 MGHADAQMVFQVYGKWMS----ENNNAQVALLNTQLS 371 +GH +M+F+VY +++ ++ +A LL ++L+ Sbjct: 375 LGHTSTEMLFRVYSRYVPNLTRQDGSAMERLLASRLA 411 >UniRef50_C3K9Z5 Putative phage integrase n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K9Z5_PSEFS Length = 410 Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 91/367 (24%), Positives = 156/367 (42%), Gaps = 64/367 (17%) Query: 11 IKTGVFD---YAKQFPSSRNLE----KFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 IK G+ D YA+ FPSS N+ FGE Q L L EV + Y Sbjct: 70 IKLGLLDDDKYAELFPSSSNVAGGKINFGEYAQ-----------LWLDSREVVGGTKANY 118 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 + + N + G L VR +L+T + + + +S N ++ Sbjct: 119 KGAL-NRYWMPG------------LALVRIDLITTTLLRR--VMAASEWKSPGVKRNAIS 163 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVS 183 L+ + + + NP + K S+ DP + EE +I + W + Sbjct: 164 KLSTILNSAMSEELIPKNPAAILELPKRSKKEIDPFTLEEANLIIAKMYEH---DHWPST 220 Query: 184 VY---------TGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHL 234 +Y TG+R E A+ W+++D + T + R +A V +T+ G +R + L Sbjct: 221 IYAAFFEFVFFTGMRLSEALAMRWDEVDEQKKTAHVCRGVALGE-VVERTKTGGDRFVLL 279 Query: 235 IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEV-SARVKNYGDHFTV 293 A+ AL +KE+ R+ G+ + + ++F P +A V+ D Sbjct: 280 NDRALHALD-------FAKEY---AERRKKGKGKVLETPYIFPPSKNAAYVRQTSD---- 325 Query: 294 DSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGK 353 + + W +K +R R Y RHTYA + +G NPAFI+ Q+GH+ QM+ Y + Sbjct: 326 --LHKQWVPTLKALNIRRRPPYNCRHTYATICIMSGMNPAFISQQLGHS-VQMLLSTYAR 382 Query: 354 WMSENNN 360 W++ +++ Sbjct: 383 WINSSSD 389 >UniRef50_B0KAZ5 Phage integrase family protein n=3 Tax=Thermoanaerobacter RepID=B0KAZ5_THEP3 Length = 403 Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 87/335 (25%), Positives = 152/335 (45%), Gaps = 39/335 (11%) Query: 37 DLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 ++T+K+ +K+L K++ +A + N Y I+ ++ +I KLL+ L Sbjct: 68 NITVKDYLKKWLETKKSSLALKTYNDYEQKIRLYIN--------PAIGNYKLLK-----L 114 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP 156 T I + + G SA T+ T LN + + L NP G + K+++ Sbjct: 115 TPLIIQNMYNNMLEQGLSARTIRYTHTVLNEALKQAIKWQMLRYNPCDGTTLPKQAKKEM 174 Query: 157 DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK 216 L+ E+ + ++AC + L+ + + +G+RP E L WEDID KN + ++R L + Sbjct: 175 KVLTPEQAKKFLEACVYNRWGILFELLLISGMRPSEALGLKWEDIDWKNNRIAVQRTLTR 234 Query: 217 DR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKC 272 + PKT + R I L + ++ L+ + SKE + +EY +K K Sbjct: 235 VKNNWQLKEPKT-PQSRRTIPLPREVMNDLKEHR--KQQSKEKL---KAKEYINYDKDKN 288 Query: 273 TFVFQPEVSARVK------NYGDHFTVDSIR---------QMWDAAIKRAGLRHRKSYQS 317 F + E ++K +YG F ++ R Q + +K AGL + + Y Sbjct: 289 KFKPE-EWEEKLKDPKVYVDYGLVFATETGRPLDLANINYQYFKPLLKNAGLPNIRLYDL 347 Query: 318 RHTYACWSLTAGANPAFIANQMGHADAQMVFQVYG 352 RHT A L AG NP ++ ++GHA+ + Y Sbjct: 348 RHTCATLLLLAGENPKVVSERLGHANITLTLDTYS 382 >UniRef50_Q4HNR8 Site-specific recombinase, phage integrase family, putative n=1 Tax=Campylobacter upsaliensis RM3195 RepID=Q4HNR8_CAMUP Length = 379 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/266 (23%), Positives = 121/266 (45%), Gaps = 31/266 (11%) Query: 100 QIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPL 159 +I K + + S T +Y LN V ++ ++N + NPFK +++ I Sbjct: 132 EIEKFFNFLDEKNISVCTKKHYAKTLNRVLEYALENELIEKNPFKMRKWRDDAKEI-QTF 190 Query: 160 SREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRF 219 S +E L+ + L +++ G R GE+ AL W+ ID +N ++I +++ Sbjct: 191 SNQEIQTLLTQSTGEIGIYL-KIALLCGARTGEILALQWKHIDFENQKIIIEQSINSFGL 249 Query: 220 TVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKC---TFVF 276 PKT A + R+I L++P + L+ G E++K F+F Sbjct: 250 GSPKT-ANSRRIIDLLEPLLSFLK---------------------GVKEQRKPREEDFIF 287 Query: 277 QPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIA 336 + + +KN+ + +R + A + R + +R Y +RH++A + L+ G N +++ Sbjct: 288 KGVLKPYIKNFHKSY----LRVQYIALLSRFNIAYRPIYNTRHSFASFMLSKGENLMWVS 343 Query: 337 NQMGHADAQMVFQVYGKWMSENNNAQ 362 MGH + + Y K++ +A+ Sbjct: 344 WMMGHKNTSITLSFYSKYLPSGTHAE 369 >UniRef50_A8RCT4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCT4_9FIRM Length = 375 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 88/336 (26%), Positives = 146/336 (43%), Gaps = 42/336 (12%) Query: 37 DLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 DL IK + +K L ++E +T L + K+IL ++G L S++ EK+ + + +LL Sbjct: 75 DLYIKFMDQKKLVIRERTFYQTDL----SFKKHILPVLGNIKL-SNLTLEKIEKYQHDLL 129 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADN---PFKGISPLKESR 153 T + K N V + T+ L ++ F + Y+ + FK + + ES+ Sbjct: 130 T---VNKQNGEVLKNS----TLELIQKELKSLLAFAYEKSYIKNMHILSFKKVINIDESK 182 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 D EEF + I+ + L+ V + G+R GE AL W DID T+ I ++ Sbjct: 183 KEVDFWQPEEFYKFIEVVDDIVYLTLFNVLYWCGLRIGEALALNWNDIDFNKKTIRINKS 242 Query: 214 LA--KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 + K R T PKTQ VI + DA+ H ++ + QK Sbjct: 243 YSDYKHRITNPKTQNSYRTVI-MPDKCFDAVSKLFE------------HDKQIIGFDNQK 289 Query: 272 CTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGAN 331 F F+ ++ D+I+ D I +A ++ + + RH++ + G + Sbjct: 290 YIFHFEKPLNQ-----------DTIKIRKDRWIAKAHVKRIRIHDLRHSHVSLLINLGFS 338 Query: 332 PAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLN 367 IA ++GH+ MV VYG W N V LN Sbjct: 339 AFDIAKRLGHS-VDMVNNVYGHWFQNAQNKMVDKLN 373 >UniRef50_Q3JF08 Phage integrase n=2 Tax=Nitrosococcus oceani RepID=Q3JF08_NITOC Length = 251 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 82/285 (28%), Positives = 129/285 (45%), Gaps = 44/285 (15%) Query: 90 EVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDN-GYLADNPFKGISP 148 E R +L +G I + N + RS +VN Y+ L+ F V G+L D+P IS Sbjct: 4 ECRDKLASG-NITRYNQKNSGGQRSPGSVNRYLAALSHTFTIAVKEWGWLEDSPMGRISK 62 Query: 149 LKESRTIPDPLSREEFIRLIDACRNQQAKNLW---CVSVYTGVRPGELCALGWEDIDLKN 205 LKE R LS E RL+ ACR L+ +++ TG R E+ AL W ++DL+ Sbjct: 63 LKEPRGRVRFLSDSERERLLKACRGSSNSFLYPAVVLALSTGARRMEIMALRWRNVDLQR 122 Query: 206 GTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 G + ++ +T+ G R + L A+D ++ RLSK ID Sbjct: 123 GLI-----------SLHETKNGERRALPLAGHALDCVK------RLSKVRQID------- 158 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWS 325 T + P N+ +D +R+ W+ A+K+AG+ + + RH+ A + Sbjct: 159 -------TDLLFPS------NHNPQQPLD-LRKPWEIALKQAGIEDFRWHDLRHSAASYL 204 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 GA A IA +GH QMV + Y + + VA +N ++ Sbjct: 205 AMNGATLAEIAEVLGHKTLQMV-KRYAHFSETHTARVVASMNAKI 248 >UniRef50_Q8R890 Tyrosine recombinase xerC-like n=5 Tax=Clostridia RepID=XERCL_THETN Length = 391 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 25/273 (9%) Query: 110 QPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGI------SPLKESRTIPDPLSREE 163 Q G+S+ T+ L F + VD GYLA NP G +P ++ T + S EE Sbjct: 125 QQGKSSKTIKALNNFLKTFFNYAVDEGYLAKNPCTGKKIVIPGTPEEKIETEIETFSDEE 184 Query: 164 FIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPK 223 ++ +A + + K L+ ++ TG+R GEL L W DID + + ++R + K + + Sbjct: 185 IKKIKEALKGHRLKALFLLAFGTGLRQGELLGLKWTDIDFEKKELRVQR-MIKQVTIIDE 243 Query: 224 TQAGTNRVIHLIKPAIDALRS---QMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEV 280 + I I +++R+ +L + KEH R R EK K V+ +V Sbjct: 244 KGNRKYKTIEQIPKTKNSIRTVPIPSSLIPMLKEH------RNRQREEKLKAGSVYLNDV 297 Query: 281 SARVKNY------GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAF 334 K Y G+ ++ + + + RAG+ +RK + RHTYA G Sbjct: 298 E---KGYVFTTELGNTIDASNLLKTYKKILNRAGVPYRKFHAIRHTYATKLFERGVPLKT 354 Query: 335 IANQMGHADAQMVFQVYGKWMSENNNAQVALLN 367 ++ +GH++ + +Y + + V LN Sbjct: 355 VSELLGHSNISITANIYTHVIPKQKTNAVETLN 387 >UniRef50_Q30S15 Phage integrase n=2 Tax=Campylobacterales RepID=Q30S15_SULDN Length = 393 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 78/355 (21%), Positives = 160/355 (45%), Gaps = 73/355 (20%) Query: 39 TIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKL-----LEVRK 93 T+++ AE+F L++T++ +L +NI+ ++A K +L LE+ + Sbjct: 78 TLQDFAEEFFELQKTQIRPHTLE------RNIMHY--NNHIAPYFGKRELGRITPLEIER 129 Query: 94 ---ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK 150 +LL Y+ +TV + + L +++ + N + NP + ++ K Sbjct: 130 WQNQLLQKYK--------------HLTVQKFRSILFSIYDKALHNDLVLKNPLEKVTAPK 175 Query: 151 ESRTIP----DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNG 206 I +P + +E ++I+ N KN + TG+RPGE+ AL W DID + Sbjct: 176 VQNNIKIEEINPFTEKELNQIIEHA-NGYMKNFIKLMAATGMRPGEIIALKWSDIDFEKR 234 Query: 207 TMMIRRNLAK--------DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIID 258 T+ + R + D T K+ +NR + ++ D+L +Q+ LT S+ Sbjct: 235 TIKVERTRLRAKKGEDIVDGLTKIKS---SNRFVDMLNATHDSLMAQLELTSNSE----- 286 Query: 259 VHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSR 318 ++F + + N+ D I + +K++G++ R Y R Sbjct: 287 ---------------YIFLNQSNMPFYNH------DIIGVNFRKILKQSGVKARPLYNLR 325 Query: 319 HTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEF 373 HT+A ++ GA+ +++ +GH D + ++Y K++ E++ ++ + Q+ +F Sbjct: 326 HTFASQMISKGADITWVSKMLGHKDVSITLKIYTKFIQEDDETRLKKI-AQMDKF 379 >UniRef50_D1B215 Integrase family protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B215_SULD5 Length = 338 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 76/329 (23%), Positives = 144/329 (43%), Gaps = 43/329 (13%) Query: 28 LEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEK 87 L+ + +++T++ ++F+ K+ + + + Y+++I ++ + +K Sbjct: 35 LQSLEKPDENVTLQYYIDRFIKEKKHFLKERTFYRYKSII--------DQYITPKYAHKK 86 Query: 88 LLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS 147 +++++ LL Y NY G+SA ++ Y T + + Q + + ++ NPF I Sbjct: 87 VVDIKTSLLKEYL----NYQFGL-GKSAKSIELYRTVFSGLLQEALFDNVISSNPFVNIK 141 Query: 148 PLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGT 207 + + P S+ E +RL+ +N V+ YTG+R GE+ L W DI + Sbjct: 142 RKPIQKPVITPFSKSE-VRLLLEESEGWLQNYIAVATYTGLRSGEIIGLKWNDIS--HNV 198 Query: 208 MMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRT 267 + +RR +R T PKT V P + L+ F + R Sbjct: 199 ISVRRTRDFNRDTKPKTLNSMRDV-----PLFEGLKP----------------FLDNQRK 237 Query: 268 EKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLT 327 +C +VF V K + D + W + R GL+ R+ Y+ RHT+A L Sbjct: 238 ITGQCEYVF---VRRDKKPWSDTQNISC--AYWYPLLDRLGLKRRRLYEMRHTFATNMLN 292 Query: 328 AGANPAF-IANQMGHADAQMVFQVYGKWM 355 +G IA +GH+ + +F VY +++ Sbjct: 293 SGKYKVTDIAQMLGHSTTEYLFNVYSRYI 321 >UniRef50_A2V4W2 Phage integrase n=5 Tax=Gammaproteobacteria RepID=A2V4W2_SHEPU Length = 388 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 80/357 (22%), Positives = 160/357 (44%), Gaps = 49/357 (13%) Query: 11 IKTGVFDYAKQFPSSRNLEKFGEA-------RQDLTIKELAEKFLALKETEVAKTSLNTY 63 I G F Y FP S+ + +F + R+ + A ++ K+ T N+Y Sbjct: 50 IDLGCFQYRDYFPKSKKVTQFEQLQREKHPDREYPFFNDFAYQWFERKKA----TWKNSY 105 Query: 64 RAVIKNILS--IIGE--KNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 R ++N+L +I + L + I ++ R++L+ Q+ K++ R +N Sbjct: 106 RNTMQNVLDKYLIPQFGNTLMNEITLSQVDFYRQQLM---QMVKADNTRQLSNRR---IN 159 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNL 179 N + + ++ + Y + P + LKE + P++ +E ++L + + K+ Sbjct: 160 NLLWPIVSMVSLAAEE-YKFEYPLRRYRSLKEEKAESHPMTIKE-VKLFLSHVPPEWKDY 217 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAI 239 + + +TG+R E+ L W+ +D + + IR+N KT + R + + Sbjct: 218 FIIRFWTGMRSCEIHGLEWQHVDFNHRLIRIRQNWVNGEVCDVKT-PKSRRDLKMCDTVY 276 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 DA + I ++ E G FVF + A + HF +++ Sbjct: 277 DAFKR-----------IKNLALSESG--------FVFTGKSDAPLDT---HFVS---KKL 311 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 W + +AGL+ R++Y++RHT A + A NP +I+ +GH+D +++F VY +++ Sbjct: 312 WYPTLIKAGLKRRRAYETRHTAAVLHIAALENPLYISQMLGHSDTRLLFDVYAPYVA 368 >UniRef50_Q1AUQ4 Phage integrase n=3 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUQ4_RUBXD Length = 379 Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 28/209 (13%) Query: 157 DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKN---GTMMIRRN 213 D L+ EE + +DA R + + L+ V+V TG+R GEL L W DIDL T+ + R Sbjct: 173 DALTPEEARKFLDAARGDRFEALYVVAVMTGMRRGELLGLRWSDIDLGQNAPATLRVGRQ 232 Query: 214 LAKDR------FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHI-IDVHFREYGR 266 L + R F PK G R I L A++AL++ R ++E + +R+ G Sbjct: 233 LQRMRDGSGLKFVAPK--GGKGRTIRLPSRAVEALKAHR--ARQAEERLKAGPLYRDEG- 287 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL 326 VF EV + + +D R+ + +K+AGL + + RHT A L Sbjct: 288 -------LVFASEVGTPL----EPSNID--RRSFKPLLKKAGLPDIRFHDLRHTCATVLL 334 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWM 355 + G NP F+ +GHAD ++ Y ++ Sbjct: 335 SQGVNPKFVQELLGHADIKLTLGTYSHFL 363 >UniRef50_UPI0001973B6A integrase family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973B6A Length = 408 Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 116/258 (44%), Gaps = 25/258 (9%) Query: 108 VTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRL 167 + + G T N L ++ + + Y NP KGI K ++ S EE I Sbjct: 124 LDKQGLQFQTQNKVRVMLLDMYNKAILDNYAVRNPAKGIRLPKHNKRNKRVFSVEEQIDF 183 Query: 168 IDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRF-------- 219 D C+ NL+ V+V TG+R GELCAL W+DIDL+ + + + L + Sbjct: 184 FDCCKGTFYDNLFTVAVNTGLRQGELCALTWDDIDLEKKEINVEKTLLYQKLEGDTGKTF 243 Query: 220 --TVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQ 277 PKT+ +NR + + K AL+ Q+ + + +II R+ + EK +F Sbjct: 244 HINPPKTKT-SNRKVPINKQCEIALKKQL----IQRNNIIS---RQSAKPEKGFENLLFT 295 Query: 278 PEVSARVKNYGDHFTVDSIRQMWDAAIK-RAGLRHRKSYQS---RHTYACWSLTAGANPA 333 + + + D +D+I+++ + R+ + + + RHT+A AG +P Sbjct: 296 TKYATPI---CDQILIDAIKKIVNEINSVRSEIEQFEMFTPHCFRHTFATRCFEAGISPK 352 Query: 334 FIANQMGHADAQMVFQVY 351 I +GH+ QM +Y Sbjct: 353 VIQTYLGHSTLQMTMDLY 370 >UniRef50_B9KXE0 Transposase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KXE0_THERP Length = 316 Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 76/276 (27%), Positives = 122/276 (44%), Gaps = 25/276 (9%) Query: 82 SINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADN 141 ++ + L +V ++L + ++ ++TQ G S +V N L+ F V G L N Sbjct: 28 ALGRLPLDKVEPQVLQAF----ASQLLTQ-GLSVQSVQNTHPLLHRPFADAVKWGLLGRN 82 Query: 142 PFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDI 201 P + + SR L+ E RL+ C + L V+V +G+R EL AL W DI Sbjct: 83 PCDLVDLSRASRLQLRALTAPEVARLLATCADDPLGPLVTVAVLSGLRLRELLALQWGDI 142 Query: 202 DLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHII 257 D + + R+L + R VP A + R + L A++ALR Q + H Sbjct: 143 DWERSEPSVVRSLQRVRGQGLVVVPPKTAASRRRVPLSPLALEALRRQ-------RRH-- 193 Query: 258 DVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQS 317 V +R + +VF S R T ++ ++RAGL HR+ + Sbjct: 194 QVEWRLAAGPTWAEGDWVF---TSVRGVPLDPAETTRRFHRL----LERAGLPHRRFHDL 246 Query: 318 RHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGK 353 RHT A L G +P +A+ +GH+ Q+ VY + Sbjct: 247 RHTTASLLLADGVHPKVVASILGHSTVQVTLDVYSR 282 >UniRef50_B8F9V7 Integrase family protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8F9V7_DESAA Length = 417 Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 63/249 (25%), Positives = 113/249 (45%), Gaps = 24/249 (9%) Query: 113 RSAVTVNNYMTNLNAVFQFGVDNGYLADNP----FKGISPLKESRTIPDPL-----SREE 163 RS TV + ++++ + NG++ NP K I P K R +P R+ Sbjct: 150 RSPATVEAAHSVIHSILDKAMHNGHIDSNPAHRLLKYILPAKNERDQKEPAPFKIKERDR 209 Query: 164 FIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPK 223 F+ + N+ + + V+ G+R GE A+ E +DL+ G+ I +D F+ PK Sbjct: 210 FLETAEKMCNRSEVMILKMMVHAGLRLGETLAMKEEGLDLERGSYHITETFKRDSFSKPK 269 Query: 224 TQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSAR 283 T+ + R + L ++ L K H+I + R + + +F P+ + Sbjct: 270 TKK-SRRKVDLPDFLVEDL----------KRHVIMLRRESLERGKGGDISLLF-PDPATL 317 Query: 284 VKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHAD 343 ++ ++ I+ + ++A LR R + RHTYA L A +PA++ QMGH+ Sbjct: 318 LECP---YSQKKIQGLMKKVCRKAKLRMRNPHDLRHTYATIMLEAHQSPAYVQRQMGHSS 374 Query: 344 AQMVFQVYG 352 Q+ +YG Sbjct: 375 IQITVDIYG 383 >UniRef50_A8UWI5 Phage integrase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWI5_9AQUI Length = 369 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 80/319 (25%), Positives = 132/319 (41%), Gaps = 44/319 (13%) Query: 55 VAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRS 114 V ++ Y +I+N + +KL + +L GY + + + S Sbjct: 75 VKPSTFRRYEGIIRN--------HFMPRFGDKKLSRITTGMLQGYVAERLSQV------S 120 Query: 115 AVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS-PLKESRTIPDPLSREEFIRLIDACRN 173 TV + L +F+ GY+ NP + + P +E + I D L+ EE L++ + Sbjct: 121 PTTVLQEVVLLKEMFKHAQSWGYIKHNPAQNLQRPRREKKEI-DILTPEEVEFLLENT-H 178 Query: 174 QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIH 233 + + + +V TG+R GEL L W+DID + + +RR L F PK++ +V Sbjct: 179 EHYRVAFLTAVMTGLRAGELWGLKWDDIDWHSKQIYVRRTLWNGEFHTPKSRHSIGKV-- 236 Query: 234 LIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV 293 D L ++ L + R K VF P +H V Sbjct: 237 ---DMPDVLVEELKLWEI--------------RCPPNKYNLVF-PSPKGEP---SEHQNV 275 Query: 294 DSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGK 353 + + + A++RAGLR + RHT A + AG N +I Q+GHA +YG Sbjct: 276 --VNRYFKPALRRAGLRVVSFHSLRHTNASIRIRAGQNIKYIQRQLGHASINTTLDIYGH 333 Query: 354 WMSEN--NNAQVALLNTQL 370 + N +Q LL+ L Sbjct: 334 LFEDMDFNRSQAQLLDGVL 352 >UniRef50_A1K6M5 Site-specific recombinase, phage integrase family n=1 Tax=Azoarcus sp. BH72 RepID=A1K6M5_AZOSB Length = 358 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 88/350 (25%), Positives = 144/350 (41%), Gaps = 60/350 (17%) Query: 9 YAIKTGVFD-------YAKQFPSSRNLEK-FGEARQDLTIKELAEKFLALKETEVAKTSL 60 Y +T FD +A Q ++ K FG A++ T+ ELAEK+ E VA SL Sbjct: 24 YPAETATFDRLSDARTWAAQTETAIKAGKHFGVAKRR-TLHELAEKY----EQAVAD-SL 77 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 ++ A ++ + L +V L+ ++ + + S TVN Sbjct: 78 KSFEARRGHL------AYWRQAFGSSALADVSPALIAEHRDRLTKRTTERGTVSLATVNR 131 Query: 121 YMTNLNAVFQFGVDN-GYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNL 179 Y+ L+A+F F V ++ NP + + ES LS +E L+ ACR + L Sbjct: 132 YIATLSALFTFAVKELQWVEANPVERVRKFGESPGRVRYLSDQERAALLTACRESRNPYL 191 Query: 180 W---CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIK 236 + +++ TG R E+ L W+ +D T+++R +T+ G RV+ L Sbjct: 192 YPAVVLALSTGARQAEITTLRWQQVDFARRTIVLREG---------ETKNGAGRVLPLTG 242 Query: 237 PAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI 296 A+D LR + + + + V T F +SI Sbjct: 243 EALDLLRDLAKVRDIRDDRVFPV----------ASTTRAF-----------------NSI 275 Query: 297 RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 + WD A+KRAG+ + + RHT A + AG +A +GH QM Sbjct: 276 KGAWDGAVKRAGISDFRWHDLRHTAASYLTMAGIGSMEVAKVLGHKTLQM 325 >UniRef50_B9MR26 Integrase family protein n=2 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MR26_ANATD Length = 400 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 94/373 (25%), Positives = 154/373 (41%), Gaps = 62/373 (16%) Query: 31 FGEARQDL------TIKELAEKFLALKETEVAKTSLNTYR----------AVIKNILSII 74 +G+ RQ++ T+ +LA K LNT+ + K+ L I Sbjct: 43 YGKTRQEVAEKIAKTLNDLANGVYVDPAKTTLKDWLNTWLWEYKKQTLRPSTFKDYLCYI 102 Query: 75 GEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVD 134 E+++ +I KL ++R E L K Q G S T+ T L++ + Sbjct: 103 -ERHINPAIGHYKLKDLRPEHLQALYNAKY-----QEGLSISTIKQIHTVLHSALDQALK 156 Query: 135 NGYLADNPFKGIS-----PLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVR 189 NG + N + + P +E R LS EE R I A ++ K + V + +G+R Sbjct: 157 NGLVNRNVSEATTLPKGKPKREIRI----LSLEEQQRFIAALEGERLKTAFLVELASGLR 212 Query: 190 PGELCALGWEDIDLKNGTMMIRRNLAKDR-------------FTVPKTQAGTNRVIHLIK 236 GEL AL W+D++ K+G + +RR+L + R F PKT+AG R++ L Sbjct: 213 IGELLALRWKDVNFKDGYIEVRRSLQRVRIFDGGNSKKTALAFQEPKTEAG-KRIVPLPP 271 Query: 237 PAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI 296 I+ L K+H R+ EK K +++ G + Sbjct: 272 VIIEEL----------KQH------RKKQLEEKLKAGALYEDNDLVFATELGTPIDPRNF 315 Query: 297 RQMWDAAIKRAGLRHRKSYQS-RHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 +++ ++AGL ++ + RHTYA L A +P + +GH D +Y M Sbjct: 316 ERLFYRIREKAGLDKSVNFHALRHTYATRLLEANEHPKVVQELLGHKDISTTLNIYSHVM 375 Query: 356 SENNNAQVALLNT 368 E A LN+ Sbjct: 376 PEIKKAAAMKLNS 388 >UniRef50_A6NY15 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NY15_9BACE Length = 417 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 62/263 (23%), Positives = 116/263 (44%), Gaps = 39/263 (14%) Query: 128 VFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTG 187 +F + + + NP +GI +++ R P LS+EE + D C+ + L+ V+V TG Sbjct: 142 LFDKAIMDDFAFKNPARGIKVVRDERVEPRVLSKEEQVDFFDTCKGTFYEELFTVAVLTG 201 Query: 188 VRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMT 247 +RPGEL AL W D++LK + + R L K + T + H+ P ++ + Sbjct: 202 LRPGELFALRWSDVNLKEKYLDVTRTLL-----YQKLEGDTGKAFHIHPP-----KTATS 251 Query: 248 LTRLSKEHIIDVHFREYGR----TEKQKCTFVFQPEVSARVKNYGDHFTVDSI-----RQ 298 L R V+F E + ++ +K + + E S+ ++ D V Sbjct: 252 LRR--------VYFDERCKLALMSQFRKKSNISLRETSSPLEGLEDLLFVTKYNTPLNSS 303 Query: 299 MWDAAIK---------RAGLRHRKSYQS---RHTYACWSLTAGANPAFIANQMGHADAQM 346 ++ +AI+ R+ + +++ RHTYA + A +P + Q+GHA +M Sbjct: 304 LYSSAIQRIVDLINESRSAVDQFETFSGHCFRHTYATRAFEADVDPKVVQKQLGHATLKM 363 Query: 347 VFQVYGKWMSENNNAQVALLNTQ 369 +Y + ++ L+ Sbjct: 364 TMDLYTHLFEDKKLEELTKLDAH 386 >UniRef50_A3D3X0 Phage integrase family protein n=1 Tax=Shewanella baltica OS155 RepID=A3D3X0_SHEB5 Length = 424 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 83/342 (24%), Positives = 137/342 (40%), Gaps = 47/342 (13%) Query: 38 LTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLT 97 LTI +L E + +A ++ +Y+ K I IGEKN+ IN + + R E L+ Sbjct: 93 LTINDLIENYTKNHYPTLAPATVKSYKGHFKRISLAIGEKNILE-INSNDVFKFRNEQLS 151 Query: 98 GYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPD 157 + TVN + L+ + Q VDNG L +P + +K + D Sbjct: 152 TL--------------AWKTVNETIRLLDTLLQNAVDNGDLVKSPI-NLRRMKIKQGHGD 196 Query: 158 PLSREEFIRLIDACRNQQAKNL-------WCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 E+ + D + Q + ++ + G+R EL L WEDIDL+ + I Sbjct: 197 STITEKLFTIEDLNKIQDSISINPMIALIILFNCCAGLRFSELMGLSWEDIDLEKRIITI 256 Query: 211 RRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRS-QMTLTRLSKEHIIDVHFREYGRTEK 269 RR ++ K + +R + ++ PA+ L + LS + I +Y + ++ Sbjct: 257 RRARVDGKYKTLKVRGVESRQVDILNPALWMLNEMKKRFYELSPQQTIKTLGADYKQIKQ 316 Query: 270 QKCTFV---------FQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHT 320 + FV +Q E R Y HF +K + K RHT Sbjct: 317 ENVRFVLLCMDTQTSYQNEQKFRKDFY--HF------------LKVINVSKTKPNHCRHT 362 Query: 321 YACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQ 362 + + GAN +I+ Q+GHA + Y KW N + Sbjct: 363 FTSLACNEGANQTYISKQLGHASVLTTEKHYLKWNKSPNKVE 404 >UniRef50_C1XYN2 Site-specific recombinase XerD n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XYN2_9DEIN Length = 387 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 79/319 (24%), Positives = 136/319 (42%), Gaps = 25/319 (7%) Query: 38 LTIKELAEKFLALKETEVAKTSLNTYR-AVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 +T+KE E++L E V T+ Y+ A+ K+ + I+G+ + + L + +LL Sbjct: 61 ITLKEFCERWLTSVEHRVKPTTHYGYKVALEKHAIPILGDIAV-QRLQPLHLTHLYADLL 119 Query: 97 TGYQIPKSNYIVTQPGR----SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 K P R S TV L+A + V G L NP + P + Sbjct: 120 ------KKRIHPNDPKRLKTLSPTTVRLVHRTLHAALEDAVRWGLLPWNPADRVKPPQAP 173 Query: 153 RTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 R + + EE R + ++ + L+ +++ TG+R GEL L W DID + G + +R+ Sbjct: 174 RYTGEVWTPEEVWRFLAEAQHSRLYALFFLALMTGMRRGELLGLKWADIDWQEGAIWVRQ 233 Query: 213 NLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKC 272 NL T+AG+ RV+ K RS + S + RE ++ Sbjct: 234 NL---------TKAGSKRVVQSPK----TYRSSRPVDVSSDVLEVLQQHREQQEKDRLGI 280 Query: 273 TFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANP 332 + E + G ++R+ + A IKRA ++ + + R T+ AG +P Sbjct: 281 GDAWTDEGWVFTTSVGTPIEPSNLRREFLAIIKRAKVKEIRFHDLRDTHVSLLALAGVDP 340 Query: 333 AFIANQMGHADAQMVFQVY 351 ++ ++GHA Q Y Sbjct: 341 KVVSERVGHASVAFTQQTY 359 >UniRef50_B6W9U7 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W9U7_9FIRM Length = 370 Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 146/331 (44%), Gaps = 58/331 (17%) Query: 37 DLTIKELAEKFLALKETEVAKTSLNTYRAVIKN-ILSIIGEKNLASSINK--EKLLEVRK 93 ++T+ EL + +L L E V T+ V KN IL +G K L +KL+ + Sbjct: 61 NITLNELLKDWLPLYEPTVKYTTYTRVYGVFKNHILPYLGNKKLDKITTPVIQKLINKKS 120 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGI---SPLK 150 + + +++ +N Y LN +F+F ++ GY NP I + K Sbjct: 121 QEIADFKL----------------INIY---LNRLFKFAINQGYTDYNPCLNIIYPTIRK 161 Query: 151 ESRTIP----DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNG 206 E + + D +EF+ +Q + ++ Y G+R GE+ AL W DID KN Sbjct: 162 EQKDMSLEYWDKEELKEFLYHAKKDLDQMWYLFFKIATYAGLRKGEILALTWNDIDFKNK 221 Query: 207 TMMIRRNLAKDR-----FTVPKTQAGTNRVIHLIKPAIDALRS-QMTLTRLSKEHIIDVH 260 T+ + ++L+ R T PKT++ R I + K I L + ++ ++L ++I Sbjct: 222 TLTVNKSLSVTRQSKKAITSPKTKSSI-RTISIDKTTIKELYNWKIEQSKLKLQNI---- 276 Query: 261 FREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHT 320 +Y T KQ + ++S R+ ++ IK+ LR + + RHT Sbjct: 277 -NQYIFTTKQ-----------------SELINLNSPRKRFERVIKKHDLRKIRLHSLRHT 318 Query: 321 YACWSLTAGANPAFIANQMGHADAQMVFQVY 351 +A AG + +++GH+ ++ +Y Sbjct: 319 HASLCFEAGMTIKDVQHRLGHSTSKTTMNIY 349 >UniRef50_C7XQF9 Phage integrase n=1 Tax=Fusobacterium sp. 3_1_36A2 RepID=C7XQF9_9FUSO Length = 351 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 36/232 (15%) Query: 125 LNAVFQFGVDNGYLADNPFKGISPL-KESRTIPDPLSREEFIRLIDACRNQQAKNLWCVS 183 L A+F + + L NP + K+ LS +EF ++ID +++ K + + Sbjct: 134 LTAIFNYAIRFHNLDKNPCHIAGSIGKKDADEMQILSLQEFNKMIDCVTDKENKFFYIIL 193 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRN---LAKDRF-TVPKTQAGTNRVIHLIKPAI 239 +TG+R GEL AL +ED+D +N T+ I +N + K+R T PKT G RVI + + Sbjct: 194 FWTGMRKGELLALTYEDVDFENKTITINKNFQIVKKERLITDPKTPRG-RRVIAVNDVVL 252 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 + ++ + ++P + ++ + + DS+++ Sbjct: 253 NCIKDLWNTS--------------------------YKPNKTDKIF----YLSKDSLKRQ 282 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 D A K+AG+ + + RH++A + L+ G N ++ ++GH Q +Y Sbjct: 283 LDTACKKAGVPRIRVHDLRHSHASYLLSNGVNIVILSRRLGHEKVQTTLNIY 334 >UniRef50_B6G0S2 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0S2_9CLOT Length = 376 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 118/266 (44%), Gaps = 33/266 (12%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPD---PLSREEFIRLI 168 G S V N + ++++F F + + DNP + L T P+ L+ +E R++ Sbjct: 132 GFSKNMVKNTLRTISSLFNFCIRAELIKDNPCDKV-VLPSKLTQPERKVALTNKEVKRIL 190 Query: 169 DACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR-----FTVPK 223 + +N + +YTG+R GE C L W+++DL G + +R NL +D+ + PK Sbjct: 191 NRFKNTHWYLSLMLPLYTGMRRGECCGLRWKNVDLDKGIIYVRENLTQDKGKKWIISTPK 250 Query: 224 TQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFV-FQPEVSA 282 T++ R I++ P ++AL+ Q+ E+ K V + Sbjct: 251 TKSSI-RTINIPLPLLEALKWQL---------------------ERNKSNNVATNSDTHV 288 Query: 283 RVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHA 342 V++ G T D+++ + G++ + RHTYA + GAN ++ +GHA Sbjct: 289 LVRDNGSIITNDTLKYLSRVINYDLGIKFN-YHNLRHTYATLLIEKGANIKDVSVLLGHA 347 Query: 343 DAQMVFQVYGKWMSENNNAQVALLNT 368 + +Y + + +LNT Sbjct: 348 SIKTTMDIYVNNTDNMRDKTLNILNT 373 >UniRef50_Q2RHJ2 Phage integrase n=3 Tax=Firmicutes RepID=Q2RHJ2_MOOTA Length = 390 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 21/244 (8%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC 171 G S V L+ ++G L NP + P + + PL+ E+ R ++ Sbjct: 131 GLSPTRVRYIHVVLHEAMSQARESGLLLQNPTEAAKPPRHPKKKVQPLNPEQVKRFLETA 190 Query: 172 RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAG 227 + + +++ TG+R GE+ L W+D+DL+ G + +R++L + R F PKT+ Sbjct: 191 KQDPLYPAFLLALGTGLRRGEILGLRWQDLDLQKGILQVRQSLIRTREGLKFEEPKTEK- 249 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 + R I L + AL+ +K I+ + E F + K + Sbjct: 250 SRRQIPLPPSVVAALKRHKAWVNQNKL-ILGPDY------EDHDLVFPVENGRPRDPKGF 302 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 ++F + + +AGL H + + RHT+A L G +P + ++GH+ + Sbjct: 303 AEYF---------NRLLDKAGLPHIRLHDLRHTHATLLLLEGVHPKVVQERLGHSTVSIT 353 Query: 348 FQVY 351 +Y Sbjct: 354 LDIY 357 >UniRef50_D2LSV7 Integrase family protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSV7_BACS4 Length = 391 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 83/363 (22%), Positives = 151/363 (41%), Gaps = 58/363 (15%) Query: 41 KELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQ 100 K LAE ++ E S ++ +K + G K+L + K LE K ++ Y Sbjct: 44 KRLAEFVTEIEAGEYIDPSKMKFKDFVKEWETKYGMKHLGA-----KTLETYKSIINNYL 98 Query: 101 IPKS--------------NYI-----------VTQPGRSAVTVNNYMTNLNAVFQFGVDN 135 IP NY+ + G S+ ++ + L +F + Sbjct: 99 IPTFGNKKLDEFKPINIINYLDCLGEDNARKDGKEGGLSSSSIKYHYRVLRNIFSRAKEW 158 Query: 136 GYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQ--QAKNLWCVSVYTGVRPGEL 193 + +NP + + P K ++ +++E I L++ +N+ K + ++ G+R GE+ Sbjct: 159 IIIKNNPVESVKPPKVTQEKTSVYTKDEVIELLELLKNEPIHQKLMVTAALMAGLRRGEI 218 Query: 194 CALGWEDIDLKNGTMMIRRNL--AKDRFTV---PKTQAGTNRV---IHLIKPAIDALRSQ 245 L W+DIDL GT+ I +L K++ V PK + +V ++L++ R++ Sbjct: 219 LGLQWDDIDLDAGTISINHSLQYTKEKGYVLGPPKNNSSIRKVSIPMYLVEEFKKYKRTK 278 Query: 246 MTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIK 305 SKE I E G K +VF G F ++ W +K Sbjct: 279 ------SKERIQAAELWEGG-----KYFYVFSSW-------NGKPFYPTAVGTWWRRFLK 320 Query: 306 RAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVAL 365 R G ++ + + RHT A + G + I+ ++GHAD + +YG ++ E + Sbjct: 321 RKGFKYIRFHDLRHTAATLLINEGEHAKTISARLGHADIKTTMNIYGHYLREADEKAANK 380 Query: 366 LNT 368 LN+ Sbjct: 381 LNS 383 >UniRef50_Q65EQ4 Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core n=15 Tax=Bacillus RepID=Q65EQ4_BACLD Length = 364 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 71/324 (21%), Positives = 138/324 (42%), Gaps = 46/324 (14%) Query: 32 GEARQDLTIKELAEKFLA-LKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLE 90 GE + T + +A+++L K+ A + L T + +++ G K + ++I ++ Sbjct: 55 GENEDNPTFEFVAKEYLKWYKKRRKASSYLKTSSIINTHLIPRFGSKKI-NNIRSRDIMR 113 Query: 91 VRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNP--FKGISP 148 + +LL Y + V L+AVF F + Y DNP G Sbjct: 114 FQNDLLDRYAVAH--------------VKKIHQVLSAVFNFAIKQEYTKDNPARLAGNVD 159 Query: 149 LKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTM 208 ++E + I + + +EF I +Q L+ Y+G+R GEL AL W DID + T+ Sbjct: 160 IEEDKHI-NYWTLDEFKAFIQHVDDQLYYALFMTLYYSGMRKGELLALTWGDIDFDSNTI 218 Query: 209 MIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTE 268 I + + T PKT + ++ + +H++ + + +T Sbjct: 219 NIDKTVYNRIVTKPKTTSSIRKI-------------------MMPKHVMRLLAQLKAKT- 258 Query: 269 KQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTA 328 K K T+V E + DH + ++ + + +K A ++ + + RH++A + + Sbjct: 259 KTKMTYVVFGE-------FHDHISTTTLDRKYAEYVKAAKVKKIRLHDFRHSHASYLINR 311 Query: 329 GANPAFIANQMGHADAQMVFQVYG 352 P+ +A ++GH D +Y Sbjct: 312 NTIPSVVAKRLGHKDVGTTLNIYS 335 >UniRef50_UPI0001873836 hypothetical protein PSPTOT1_3787 n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI0001873836 Length = 184 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 17/148 (11%) Query: 230 RVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVF------QPEVSAR 283 R + LIKPA+DAL+ LT+ ++ H +D+ R+ + K FVF +P VS Sbjct: 45 RKVRLIKPALDALQKLRALTQKTRPHHVDIVERDNRTVRQHKLHFVFLNASSGEPHVSD- 103 Query: 284 VKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG-ANPAFIANQMGHA 342 FT+ + + ++ AG+R+R Q RHTYA L++G A+ + A QMGH Sbjct: 104 -------FTIRD--RFFKTHLEHAGVRYRGPGQCRHTYASQMLSSGVASIDWSAEQMGHT 154 Query: 343 DAQMVFQVYGKWMSENNNAQVALLNTQL 370 D M+ + YG W++E+ + +L L Sbjct: 155 DGNMIHKHYGTWINEDGPDVIGMLEHAL 182 >UniRef50_B1VP49 Putative phage integrase n=1 Tax=Streptomyces griseus subsp. griseus NBRC 13350 RepID=B1VP49_STRGG Length = 423 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 72/262 (27%), Positives = 108/262 (41%), Gaps = 18/262 (6%) Query: 114 SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGI-SPLKESRTIPDPLSREEFIRLIDACR 172 SA TV L + Q + +A N + + +P E + + PL E L+ R Sbjct: 160 SARTVQYIHAVLRSALQQAIREELIARNVARIVETPTVEPKEV-RPLDAAEVRLLLKTAR 218 Query: 173 NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGT 228 + LW + V TG+R GE L W D+DL GT+ +RRN+ + R F PKT Sbjct: 219 PHRLYALWLLLVSTGLRRGEALGLTWADVDLTAGTLRVRRNVQRIRRELIFGTPKTMRSV 278 Query: 229 NRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYG 288 R I L K + AL T R +E V ++ +T Q VF ++ RV + Sbjct: 279 -RTISLPKSCVQAL----TAHRTQQEREQKVAGAKWQQTPGQPAGLVFT-TLTGRVTD-- 330 Query: 289 DHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVF 348 S+ +M + A +R + + RHT A L G + I +GH+ M Sbjct: 331 ----PRSLNRMLTILCRDAKVRRVRVHDLRHTCASLLLAQGVDARTIMETLGHSTITMTL 386 Query: 349 QVYGKWMSENNNAQVALLNTQL 370 Y M A ++ L Sbjct: 387 DTYAHVMGSTLRAAAEQMDDAL 408 >UniRef50_A1WV14 Phage integrase family protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WV14_HALHL Length = 384 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 93/372 (25%), Positives = 156/372 (41%), Gaps = 50/372 (13%) Query: 11 IKTGVFDYAKQFPSSRNLEKF-------GEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 I+ G FDYA FP+SR L + G D A ++ L + ++ Sbjct: 50 IEMGTFDYAAWFPNSRKLAEAQRWLREQGSRAPDQRFGPYAWQWYQLHLGDWKESYARRV 109 Query: 64 RAVIKN-ILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 V++ ++ GE L I + + R ELL + S +N + Sbjct: 110 CGVLEGYLIPHFGEWPL-DQITERAVRAFRHELLELTNARGERRL------SNARINFIL 162 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCV 182 T L V +F ++ ++P + I PL++ R P PL+ E+ + A + + + Sbjct: 163 TPLAGVMRF-AESELGIEHPMRQIRPLRDDRDDPMPLTAEQVHAFLAAV-DPDYYLYFKL 220 Query: 183 SVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDAL 242 YTG+R E+ L +DL+ + +R R T K + T R I L P + A Sbjct: 221 RFYTGLRSCEVDGLKVCYVDLERRQLRVREARVDGRQTTLKHRK-TRRDIPL-SPGLAA- 277 Query: 243 RSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI-RQMWD 301 +D H R GR Q +VF ++ G + Q+W Sbjct: 278 -------------ELDRHIR--GR---QGDDYVF-------TRSDGRPLHPSWVAEQVWK 312 Query: 302 AAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKW----MSE 357 +K GL R+ YQ+RHT A L AG NP F++ +GH+ +M+F+ Y + + + Sbjct: 313 PTLKALGLAPRRVYQTRHTAAVLHLAAGENPLFVSRLLGHSSTKMLFERYAPFVANALGD 372 Query: 358 NNNAQVALLNTQ 369 + +A A++ +Q Sbjct: 373 DGSAFEAMMASQ 384 >UniRef50_C1SIY0 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SIY0_9BACT Length = 386 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 57/242 (23%), Positives = 110/242 (45%), Gaps = 30/242 (12%) Query: 116 VTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLID--ACRN 173 V VN + ++ + F V+ G+L ++PFK + L+ + P ++EE RL+ A + Sbjct: 149 VVVNRKLRSVRSFFNEVVEEGHLKESPFKKVKYLRNEKVDIKPFNQEELARLLVGFAEKY 208 Query: 174 QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIH 233 ++ ++G RP E+ L W+ ID +N ++IR T+ KT + R I Sbjct: 209 PAYESFVAFLAFSGCRPNEVVGLKWDKIDWENRKILIREGFVLGEETLLKTDSSV-RDID 267 Query: 234 LIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV 293 + +P + L +L K ID +VF E + R+ Sbjct: 268 MTEPL-----EVLLLQQLDKG--ID-------------SEYVFVNEFNRRI-------CW 300 Query: 294 DSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGK 353 ++ RQ + +K + R +YQ RHT+A ++ G + +++ +GH++ + Y + Sbjct: 301 ENFRQKYHRVLKLKNIVSRPAYQLRHTFASMAIKNGEDILWVSRMLGHSNLKTTLTTYTR 360 Query: 354 WM 355 ++ Sbjct: 361 YI 362 >UniRef50_Q3Z840 Site-specific recombinase, phage integrase family n=6 Tax=Bacteria RepID=Q3Z840_DEHE1 Length = 435 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 75/337 (22%), Positives = 140/337 (41%), Gaps = 33/337 (9%) Query: 57 KTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGY---QIPKSNYIVTQPGR 113 +T+ T+ + +NI+ ++ ++ K L E+ +++ Y Q+ K + G Sbjct: 81 QTTQRTFESYYQNIIG-----HIEPALGKVILTELTPQIIQAYYARQLEKGR-ADGKGGL 134 Query: 114 SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRT---IPDPLSREEFIRLIDA 170 SA +V ++ + G + NP + P + +T +PD ++E RL+DA Sbjct: 135 SARSVLYQHRIISKCLKQATKLGLIMRNPADAVEPPRPRKTAISVPD---KDELPRLLDA 191 Query: 171 CRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR---NLAKDRFTVPKTQAG 227 +C+ +Y G+R GE AL W+DIDLK T+ I L + + + + Sbjct: 192 FETTPYYVFYCLLLYCGMRRGEALALRWKDIDLKQDTIQIAETAFTLRSGEYVIKEPKTP 251 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 +R I P M L L + ++ + G E FVF + Sbjct: 252 HSRRCIDIPPT-------MKLLLLEYKADQTAYYAKLG-VELGLHDFVF-------TRPN 296 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 G+ +++ + A+++AG + + RH +A L AG +P ++ ++GHA + Sbjct: 297 GEPLNPNTVTHTFLKAVRKAGFDKLRLHDLRHLHATLMLQAGIHPKIVSERLGHASINIT 356 Query: 348 FQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNEAMK 384 Y M V + + LS ++ N K Sbjct: 357 LDTYSHVMPGLQKKAVNVFDKMLSANEESLEENSVSK 393 >UniRef50_C6QSP6 Integrase family protein n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QSP6_9BACI Length = 399 Score = 77.4 bits (189), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 84/332 (25%), Positives = 151/332 (45%), Gaps = 56/332 (16%) Query: 40 IKELAEKFLALKETEVAKTSLNTYRAVIKN-ILSIIGEKNLASSINKEKLLEVRKELLTG 98 IKE K+ A+KE +++T+LN Y + IKN IL +G I++ K + + L Sbjct: 79 IKEWETKY-AVKE--LSETTLNNYLSHIKNHILPALGH----MRIDQIKPVHIVNFL--- 128 Query: 99 YQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDP 158 QI +++ +P + N Y+T N + Q V+ + NP + + P Sbjct: 129 DQIKRADG-KKKPLATRTIENAYLTIRN-ILQRAVEWQIIKSNP---------ASAVKKP 177 Query: 159 LSREEFIRLIDACRNQQAKNLW--------------CVSVYTGVRPGELCALGWEDIDLK 204 S++E ++ + ++ + L+ +++ G+R GEL AL W +IDL+ Sbjct: 178 KSKKEAVKEVQVYDEKEVEALFRAVQNEPFHWRIFTTLAIAAGLRRGELLALEWSNIDLE 237 Query: 205 NGTMMIRRNLAKDRF----TVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVH 260 G + I + + K R PKT+ +NR++ L K + L+ L + H + Sbjct: 238 KGVIRINKAIVKGRKRSVEKSPKTKK-SNRLVSLPKSVVAELK-------LYRRHWLKQK 289 Query: 261 FREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHT 320 + G K++ ++F G HF + W KRAG+R+ + + RHT Sbjct: 290 L-QAGDLWKEEKEYLF-------CNIDGRHFYPTTPTTWWRRFTKRAGIRYIRLHDLRHT 341 Query: 321 YACWSLTAGANPAFIANQMGHADAQMVFQVYG 352 A + G + IA ++GH+D ++ +YG Sbjct: 342 SATLLINQGVHAKIIAERLGHSDIRVTMDIYG 373 >UniRef50_C2E2T4 Bacteriophage integrase n=5 Tax=Lactobacillus RepID=C2E2T4_LACJO Length = 386 Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 65/236 (27%), Positives = 102/236 (43%), Gaps = 29/236 (12%) Query: 128 VFQFGVDNGYLADNPFKG-ISP--LKESRTIPDPLSREEFIRLIDACRNQQAKNLWC--- 181 V + V+N + NP K I P K+ R + S+EE + +DAC+ ++ ++ Sbjct: 147 VLDYAVNNDLIVKNPMKRVIKPKMQKDKREFTNFYSKEELNKYLDACKQKKNPRVYLFFR 206 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFT-----VPKTQAGTNRVIHLIK 236 + YTG+R GE AL W DID +N T+ I + L+ PKT+A +NR I + + Sbjct: 207 LLAYTGMRKGEALALKWSDIDFENETIRINKTLSLGTHNSLVIGTPKTKA-SNRTIQVDE 265 Query: 237 PAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI 296 I L+ +R+ R E K F + N + + Sbjct: 266 QTIYYLQE----------------WRKRQRKELFKVGFNALTDDQLLFSNGNNQLIRPWL 309 Query: 297 RQMWDAAI-KRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 Q W+ I K A L+H + RHT+A AG + ++GH+D VY Sbjct: 310 VQYWNKTIAKDARLKHITVHGFRHTHASLLFEAGTPMQDVKERLGHSDITTTMNVY 365 >UniRef50_B9MP49 Integrase family protein n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MP49_ANATD Length = 373 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 76/315 (24%), Positives = 136/315 (43%), Gaps = 33/315 (10%) Query: 54 EVAKTSLNTYRAVIKNILSIIGEKNLASSIN---KEKLLEVRKELLTGYQIPKS-NYIVT 109 E+ LNT V KN +S+ ++ +SSI K L +V LT + K +I Sbjct: 65 ELLDLWLNT---VAKNRVSLSTFQSYSSSIALHIKPFLGDVELNKLTAMDLQKYYQHITG 121 Query: 110 QPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLID 169 + G S+ + ++ + V + NP + P ++ P + R +D Sbjct: 122 EKGLSSTLALYHHRIIHQALDYAVRMNMIEKNPADYVDPPRKRSYQPSIWDEDTIKRALD 181 Query: 170 ACRNQQAKNLWC---VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQA 226 RN N+W +++YTG+R GE+ AL W+DI+L+ G +++ + L K + + Sbjct: 182 IFRNT---NIWVPVLLAIYTGMRIGEITALKWDDINLEQGYIVVSKTLMKINRQLYIKEK 238 Query: 227 GTN----RVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSA 282 G N R++ + I+ L+ KE + +E E CTF Sbjct: 239 GENKSSYRIVAISSNVIEELKQWRRKQEQYKEKL-----KELYHNEGFVCTF-----EDG 288 Query: 283 RVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHA 342 RV++ I +++ I++ GL + + RHT+A L G +P I++++GH+ Sbjct: 289 RVQD------PKYITKVFQKTIEKHGLPKIRFHDLRHTHASLLLKHGVDPKHISDRLGHS 342 Query: 343 DAQMVFQVYGKWMSE 357 +Y E Sbjct: 343 TITTTLNIYSHVFDE 357 >UniRef50_UPI0001C31A42 integrase family protein n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31A42 Length = 452 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 93/357 (26%), Positives = 141/357 (39%), Gaps = 52/357 (14%) Query: 26 RNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINK 85 R+ E E T E A +LA +E EVA ++ R + + L L +I+ Sbjct: 80 RSAEPGAEVAALPTFHEFATDWLARREGEVAPRTVEYERWALTHHLLPHFAHTLLDAIDI 139 Query: 86 EKLLEVRKELLTGYQIPKSNYIVTQP-----GRSAVT--------VNNYMTNLNAVFQFG 132 + + R+ + ++ V +P GRSA T +N + L AV Sbjct: 140 ATVDDYRRAKVAESDRRRTAIEVGRPLRAGRGRSAPTLRPLSPGSINKTIDVLQAVLALA 199 Query: 133 VDNGYLADNPFKGISP-LKESRTIPDPLSREEFIR-LIDAC---------RNQQAKNLWC 181 + G++ADNP G LK S+ P L E I+ L+DA R + + Sbjct: 200 REYGHIADNPATGRRRRLKASKPRPVHLDAAEPIQALLDAAATLDADTRHRMRDRHAIIA 259 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDA 241 ++ G+R ELC L W DIDL N + + R+ KT AG R I L+ Sbjct: 260 TLLFAGLRAHELCQLRWRDIDLTNARLQVSRS---------KTDAG-RRTIELLPILRAT 309 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKC-TFVFQP--EVSARVKNYGDHFTVDSIRQ 298 L + +R + + G+ EK V QP V+ R+ DH + Sbjct: 310 LTAHKRRSRATDPDDLVFPTGTGGQREKDNLRNRVLQPTIPVADRLLAERDHPPLPR--- 366 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 GL ++ RHTYA + G +PA + Q+GH D + Y M Sbjct: 367 ---------GL---TPHKLRHTYASILVACGTDPATVMAQLGHTDPHFTLRAYAHVM 411 >UniRef50_A6Q245 Site-specific recombinase, phage integrase family n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q245_NITSB Length = 378 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 79/337 (23%), Positives = 144/337 (42%), Gaps = 65/337 (19%) Query: 32 GEARQDLTIKE-------LAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSIN 84 GE +L KE AEK+L LKE L TY + K + Sbjct: 66 GELEAELKAKETPKAFRYYAEKYLLLKE------QLKTYDELSKQV-------------- 105 Query: 85 KEKLLEVRK---ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADN 141 +KL+EV + +T +I + + + ++ TV Y+ L ++F ++ G + DN Sbjct: 106 -DKLIEVFDKDIDAITRGEIKEWSAFALR-DKTPKTVRKYLNLLGSIFDTAIEYGVIKDN 163 Query: 142 PFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDI 201 P + I +P S +E + L+ + + +N ++ +TG+RPGE+ AL +D+ Sbjct: 164 PARKIKLPVHIEKHKEPFSSDE-VELLLSTASGWFRNYLAIAFFTGMRPGEIIALTKDDV 222 Query: 202 DLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHF 261 +LK T+ + + + T PKT V P +DAL +++D Sbjct: 223 NLKRRTINVSKARRYGKTTTPKTVYSIREV-----PILDALVP----------YLMD--- 264 Query: 262 REYGRTEKQKCTFVFQPEVSARVKNYGDHF-TVDSIRQMWDAAIKRAGLRHRKSYQSRHT 320 + ++F + GD F + W I+++GL +R+ Y +RHT Sbjct: 265 -----QIENSSYYLF-------TNSKGDQFWDAKKLHPYWKEVIEQSGLMYREMYATRHT 312 Query: 321 YACWSLTAGANPAF-IANQMGHADAQMVFQVYGKWMS 356 + L +G +A +GH ++ + Y +++S Sbjct: 313 FITAMLKSGYVSVMELAQIVGHKNSTEIMNNYARFIS 349 >UniRef50_A6QA80 Site-specific recombinase, phage integrase family n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA80_SULNB Length = 366 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 39/248 (15%) Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPD--PLSREEFIRLIDACRNQ 174 T+ +Y+ + +FQ ++ L+ NPF I +K + + P + +E +++ + Sbjct: 119 TLKSYVVDCKGIFQVALEEEILSKNPFVHIKVVKNGKESEEVIPFTSQEVQTILEHA-PR 177 Query: 175 QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHL 234 KN + YTG+R GE+ L DI K T ++R++++ + PKT V Sbjct: 178 PLKNFLAIGFYTGMRSGEILGLQLSDIYDKRIT--VKRSISRGVISTPKTVKSIREV--- 232 Query: 235 IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDH-FTV 293 P D LR + + K K ++F N G H ++V Sbjct: 233 --PLFDVLRPYLN--------------EQVQTARKLKSVYLFS--------NEGRHLYSV 268 Query: 294 DSIR-----QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAF-IANQMGHADAQMV 347 D+IR +W + + +RK Y +RHT+ L +G IA +GH +++M+ Sbjct: 269 DTIRGKKPYGVWAKLLSDLEIPYRKIYNTRHTFITAMLKSGELSVLEIAQIVGHTNSKMI 328 Query: 348 FQVYGKWM 355 + Y +++ Sbjct: 329 LENYARFI 336 >UniRef50_UPI0001C37D82 integrase family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37D82 Length = 339 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 73/318 (22%), Positives = 135/318 (42%), Gaps = 30/318 (9%) Query: 36 QDLTIKELAEKFLALKETEVAKTSLNTYRAVIKN-ILSIIGEKNLASSINKEKLLEVRKE 94 Q T++E E++L + + T+ Y + +N I ++G+ L +++E + Sbjct: 24 QKFTLREWNERWLNIYCKAIKTTTKEAYISYTENHINRVLGDIELCK-LSREDVQLFLNS 82 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRT 154 L G + K+ S ++ N L+ VDNGY+ NP K K ++ Sbjct: 83 LSLGIGLEKA--------LSPKSIKNIHGILHKSLDVAVDNGYILANPAKKNDLPKIKKS 134 Query: 155 IPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL 214 LS EE + + A + Q + L+ ++++TG+R GE+ L W+ I+ + G + + R L Sbjct: 135 EVHALSVEEIKKFLIAIKGCQMEYLFKITLFTGMRAGEIMGLTWDCINFEEGYISLYRQL 194 Query: 215 AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTF 274 R PK+ +L++ + ++++ F+ EK+ F Sbjct: 195 V--RIKNPKSDN--------YYYTFSSLKNGRSRRLYPPMFVMNMLFK---MKEKKTSDF 241 Query: 275 VFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAF 334 VF + +HFT +I + G+ + + RHTYA S+ + + Sbjct: 242 VF-------CNSENNHFTHSAIYNSLKRITGKIGITDFRFHDLRHTYATISIRSDVDTMT 294 Query: 335 IANQMGHADAQMVFQVYG 352 + MGH A VYG Sbjct: 295 LKENMGHHSAAFTLDVYG 312 >UniRef50_A7WY94 Integrase homolog n=25 Tax=Firmicutes RepID=A7WY94_STAA1 Length = 397 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 55/267 (20%) Query: 119 NNYMTNLNAVFQFGVDN----GYLADNPFKGISPLKESRTIPDPLSREEFIRLI------ 168 ++Y+ + +F +D G NP K I +K+ ++ + ++EEF ++I Sbjct: 127 SSYVRAVQGLFSVAMDRAIVLGITTTNPSKIIGNVKKQKSKIEFWTKEEFEKVISLIYKE 186 Query: 169 DACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL-----AKDRFTVPK 223 D ++ +LW + + TG+R GE A+ WEDID +G + I + L + RF PK Sbjct: 187 DYYQHFLFISLWFLFM-TGMRIGEATAIQWEDIDFDSGVLTINKTLYYKNQSNYRFVEPK 245 Query: 224 TQAGTNRVIHLIKPAIDALRSQMTLTRLS-----KEHIIDVHF-REYGRTEKQKCTFVFQ 277 T+A ++ + TLT LS ++++I F Y QK T + Sbjct: 246 TKASVRHIV----------LDKCTLTYLSEWKEVQQNLIQTDFVMSYNGIPTQKHTLSYA 295 Query: 278 PEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIAN 337 E A++ AG+ + + RH++A ++ G NP I + Sbjct: 296 IERYAKL----------------------AGIHRIRIHGLRHSHASLLISMGENPLIIKD 333 Query: 338 QMGHADAQMVFQVYGKWMSENNNAQVA 364 ++GH D + YG + N+N +VA Sbjct: 334 RLGHEDIETTLGTYGH-LYPNSNFEVA 359 >UniRef50_A7HZQ7 Bacteriophage-related integrase n=3 Tax=Campylobacterales RepID=A7HZQ7_CAMHC Length = 385 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/264 (22%), Positives = 117/264 (44%), Gaps = 45/264 (17%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPF------KGISPLKESRTIPDPLSREEFI 165 G +++ Y + +F++ ++N ++ NPF + P + + +P S +E + Sbjct: 155 GLKDSSISGYCSFFKMLFRYAINNDLISKNPFFIPRFKQKYEPQETDKFVP--FSLDEIL 212 Query: 166 RLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK-DRFTVPKT 224 LI +++ + V+ +TG R GE+ AL + D+D KN + I + L+ PKT Sbjct: 213 TLIRNAGDEELRLFLVVAFFTGARTGEIFALTYADLDFKNRQIRINKTLSDLGVIDSPKT 272 Query: 225 QAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARV 284 ++ +NRVI + +D + + L +L+ H K +F+ S Sbjct: 273 KS-SNRVIDM----LDIVYKE--LIKLNNAH---------------KDEQIFKLSRSM-- 308 Query: 285 KNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIA-NQMGHAD 343 IR ++ ++ G R+ Y +RH++A L+ G P ++ MGH D Sbjct: 309 -----------IRVKFNNLQEKLGYNKRRLYDTRHSFASVMLSRGEEPMWVGCKMMGHKD 357 Query: 344 AQMVFQVYGKWMSENNNAQVALLN 367 ++ Y K++ + + LN Sbjct: 358 LNETYRSYAKYLPKEVKKRATFLN 381 >UniRef50_B1RM53 Phage integrase n=4 Tax=Clostridium RepID=B1RM53_CLOPE Length = 400 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 68/329 (20%), Positives = 134/329 (40%), Gaps = 42/329 (12%) Query: 54 EVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGR 113 ++ +S Y + +N + +SSI K KL+++R + Y N +V++ + Sbjct: 93 DLKPSSFERYEGLYRNYIE-------SSSIGKIKLMDLRTHHIQAYY----NSLVSEERK 141 Query: 114 SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRT---IPDPLSREEFIRLIDA 170 S T+ L + + GY+ N I+ K S + I + + EE + Sbjct: 142 SPSTIKTINKCLKSCLNQALKEGYITKNYCTLITLPKGSESPKEIINIFTLEEQQTFMKE 201 Query: 171 CRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL---------AKDRFTV 221 C N + L+ +++ TG+R GE+ AL W DI+ KN + I + + F + Sbjct: 202 CMNNKNGMLYILALGTGLRLGEILALKWTDINFKNNYIDINKAIKSTYKIDSKGNREFQI 261 Query: 222 PKTQAGTN---RVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQP 278 + Q T R + L I+ L+ + ++ I+++F VF Sbjct: 262 IEQQPKTKNSIRTVPLNDNLIELLQQHRKKQMIDRDSNIEIYFDN---------NLVFST 312 Query: 279 EVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQ 338 + G++ ++R+ + + + L+ + + RHT+A G P + Sbjct: 313 PI-------GNYLNESNVRKTFKRILNKCNLKELRFHDLRHTFATRLFENGVPPKTVQTI 365 Query: 339 MGHADAQMVFQVYGKWMSENNNAQVALLN 367 +GH+D +Y M + + + LN Sbjct: 366 LGHSDISTTLNIYTHVMKDTKDKAIDKLN 394 >UniRef50_A5TWD8 Possible integrase n=3 Tax=Fusobacterium RepID=A5TWD8_FUSNP Length = 353 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 121/261 (46%), Gaps = 39/261 (14%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK-ESRTIPDPLSREEFIRLIDA 170 G S T+N Y+ L F + V L NPF + LK E++ D ++ +EF ++++ Sbjct: 121 GSSIRTINAYVKML---FTWCVRYKNLTSNPFDMVDRLKLETKKRMDIITVDEFNQIVEQ 177 Query: 171 CRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR---NLA-KDRFTVPKTQA 226 N K ++ + +TG+R GE AL +DID N T+ + + NL+ K T PKT+ Sbjct: 178 VNNPDMKLMFKLLFWTGLRIGEARALKIDDIDFNNKTISVTKSYTNLSGKSIITTPKTK- 236 Query: 227 GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKN 286 G+ RVI + D L S++ ++I+D F+F+ ++ N Sbjct: 237 GSIRVIKI----DDVLLSEIKDYIDKAKYILD-------------DNFIFRFNKASYRYN 279 Query: 287 YGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 + +A IK G R + + RH++A + + G + I+ ++GH++ M Sbjct: 280 FK------------NATIKVLG-RDLRVHDLRHSHASFLINNGVDILLISKRLGHSNTAM 326 Query: 347 VFQVYGKWMSENNNAQVALLN 367 VY + N + L+N Sbjct: 327 TLNVYSHLYPDRENEAINLIN 347 >UniRef50_D2S8K7 Integrase family protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S8K7_9ACTO Length = 377 Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 21/244 (8%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC 171 G SA +V L A V +G + NP + R LS ++ L++A Sbjct: 130 GLSASSVRTIYAVLRAALDVAVRDGLIQRNPAALVKRPAVERKDAGYLSAQQAEALLEAV 189 Query: 172 RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTV----PKTQAG 227 R + + L+ V + TG+R GE AL W D+DL + +R L++ + PKT+ Sbjct: 190 RGDRLEALYRVMLATGLRRGEALALHWRDVDLDAAVVRVRWTLSRTSAGLELGEPKTEK- 248 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 + R + L PA++ LR+ R + E + Q VF E+ Sbjct: 249 SRRTVPLPVPAVETLRAHR--KRQAAEQLAAGSL-------WQASGLVFTSEI------- 292 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 G ++ + ++A +RAGLR + RH+ A + L AG + + +GH+ + Sbjct: 293 GTPLEPRNVLRRFEALAERAGLRGVHLHTLRHSAASFLLAAGTHTKVVQEHLGHSSYAIT 352 Query: 348 FQVY 351 +Y Sbjct: 353 ADIY 356 >UniRef50_Q5X3B3 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=Q5X3B3_LEGPA Length = 353 Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 114/262 (43%), Gaps = 44/262 (16%) Query: 113 RSAVTVNNYMTNLNAVFQFGVDN-GYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC 171 RS TV YM +L+ F V G+L D+P + ++ KE R LS +E RL+ C Sbjct: 129 RSPSTVVRYMASLSHAFTIAVKEWGWLEDSPMRRVTKPKEPRGRVRFLSDDERARLLSEC 188 Query: 172 RNQQAKNLW---CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGT 228 + ++ L+ +++ TG R E+ L W+++D + T+ +T+ G Sbjct: 189 KKSDSQYLYLAVVLALSTGGRKMEILGLSWKNVDFNRSII-----------TLHETKNGE 237 Query: 229 NRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYG 288 RV+ L A+D ++ ++ + VF + Sbjct: 238 RRVLPLTGHALDLMK-------------------QHAKVRHVNSDLVFPGK--------- 269 Query: 289 DHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVF 348 D T +R ++ A+KRAG+ + + RH+ A + GA+ A IA +GH QMV Sbjct: 270 DFKTPIDLRTPFETALKRAGITDFRWHDLRHSCASYLAMNGASLAEIAEILGHKTLQMV- 328 Query: 349 QVYGKWMSENNNAQVALLNTQL 370 + Y + + VA +N ++ Sbjct: 329 KRYAHLSEAHTSKVVARMNEKI 350 >UniRef50_C2EIM6 Phage integrase n=1 Tax=Lactobacillus salivarius ATCC 11741 RepID=C2EIM6_9LACO Length = 370 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 105/242 (43%), Gaps = 37/242 (15%) Query: 128 VFQFGVDNGYLADNPFKGISPLKESRTIP--DPLSREEFIRLIDACRNQQ--AKNLWCVS 183 + Q+ V + +NP + +E +T + S+EE + + ++ L+ + Sbjct: 145 ILQYAVTLKLIPENPMNNVIKPREKKTYGSNNYYSKEELKTFLAYSKKEKFHVYVLFRLL 204 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD---RFTV--PKTQAGTNRVIHLIKPA 238 Y+G+R GEL AL DID + I + ++ D RF + PKT G NR+I + P Sbjct: 205 AYSGMRIGELLALKVADIDFNTSQISITKTISSDADSRFELHKPKTTTG-NRIIS-VDP- 261 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 D + TL + K+ D FR YG C+ + P A KN Sbjct: 262 -DTINLVSTLIKDKKKD--DFIFRFYG------CSKPYSPRTVALWKN------------ 300 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 IK+A LR + RHTY +G N I Q+GH+ +M VY +S N Sbjct: 301 ---KIIKKANLRKISLHGFRHTYTSLLFESGVNIKKIQKQLGHSKVEMTLNVYTH-LSRN 356 Query: 359 NN 360 NN Sbjct: 357 NN 358 >UniRef50_C3XGP1 Phage integrase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XGP1_9HELI Length = 182 Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 31/175 (17%) Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDA 241 ++++TG+R E+ AL +EDIDLK + + + L+ + T KTQ+GT V I+A Sbjct: 18 IALFTGMRVNEILALKYEDIDLKRNIIHVCKTLSNGKITTTKTQSGTREV-----EIIEA 72 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDS-IRQMW 300 L Q L L +E+ K ++F N+ + F I + + Sbjct: 73 L--QYALQELKQEN---------------KIGYIFA--------NHNNKFIAKQRIAKQF 107 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 + + + R Y +RHT+A SL+ G + +IAN +GH D + Y K++ Sbjct: 108 KEILTKLHIETRTLYSTRHTFASLSLSYGEDLLWIANMLGHKDVSTTCKSYAKYI 162 >UniRef50_A1AUY6 Phage integrase family protein n=2 Tax=Desulfuromonadales RepID=A1AUY6_PELPD Length = 402 Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 62/239 (25%), Positives = 104/239 (43%), Gaps = 38/239 (15%) Query: 114 SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRN 173 +A T N+ + L + V G L NP G KE LS+EE + + A + Sbjct: 171 TACTANHLLATLKRMLNLAVKWGLLEKNPAGGQEKFKEGPLRERYLSKEELPKFLKALED 230 Query: 174 QQAKNLWCVS-----VYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGT 228 Q +L V+ +YTG R E+ +L WE++ L ++R +PKT+ G Sbjct: 231 QD--DLLSVAALRMLLYTGCRREEIMSLRWENV-----------RLDEERIFLPKTKNGR 277 Query: 229 NRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYG 288 +R +HL A KE I D+ R+ + +VF P K Y Sbjct: 278 SRTVHLNARA--------------KEVIQDLQARKDQEDRTRGSEYVF-PSRQGTKKGY- 321 Query: 289 DHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 + +R+ ++ A AG+ + + + RHT+A ++++GA+ + +GH D M Sbjct: 322 ----IYDLRKPFEKACLNAGIDNFRIHDLRHTFASMAVSSGADLYAVQRLLGHQDIAMT 376 >UniRef50_C8WVH7 Integrase family protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WVH7_ALIAD Length = 391 Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 78/325 (24%), Positives = 135/325 (41%), Gaps = 43/325 (13%) Query: 36 QDLTIKELAEKFLALKETEVAKTSLNTYRAVIKN-ILSIIGEKNLASSINKEKLLEVRKE 94 + T+ E A ++ A K + + + TY V++ IL +G+ + S I + + ++ Sbjct: 68 KSFTLHEWASRWFADKSSSLRPWTRRTYHHVLQAYILPELGKMPI-SKIEARHIQALYRK 126 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRT 154 L SN + VTV+ L V GYL +PF + P E +T Sbjct: 127 L--------SNRL------KPVTVHRIHRVLKTCLLAAVKAGYLDKSPFLNVEP-PEHKT 171 Query: 155 IPDP-LSREEFIRLIDACRNQQAKNLWC--VSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 P P LS + RL+ R + + ++++TG+R GE+ L W DIDL G + + Sbjct: 172 PPKPVLSVNDAFRLLAWLREHRPTSYMAAFLAIHTGMRMGEIAGLQWRDIDLDTGVIQLE 231 Query: 212 RNLAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRT 267 R + + F P G+ R I + + +D LR R + +E R Sbjct: 232 RTRYRPKGGQDFLGPPKTFGSRRRIVVTREVVDELR------RWKQSQ------QEIERE 279 Query: 268 EKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLT 327 +FV + SA + + + R K GL + RHT+A W L Sbjct: 280 SWTPESFVVRLPNSAPPSPASFNNAIQNAR-------KELGLPPVSFHGLRHTHATWLLE 332 Query: 328 AGANPAFIANQMGHADAQMVFQVYG 352 +G + ++ ++GH+ + +Y Sbjct: 333 SGVDLKIVSERLGHSSITITADIYA 357 >UniRef50_B7WQQ6 Integrase family protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQQ6_COMTE Length = 429 Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 62/249 (24%), Positives = 103/249 (41%), Gaps = 32/249 (12%) Query: 114 SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACR- 172 S T NNY++ +++ V +G L + + K + DP S E ++ R Sbjct: 165 SGKTFNNYLSAVSSALALAVQDGILTEAVSTARAHKKWQKKQADPFSLNEINSIVSYMRE 224 Query: 173 --NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNR 230 +++ NL TG+R EL L W +D + + L T+ ++R Sbjct: 225 RYDERIANLVEFWSLTGLRSSELYGLRWGSVDFNRAEIKVHEALVFGEHKA-STKTDSSR 283 Query: 231 VIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGD- 289 ++ L K AI+ LR Q +K TF+ + Y D Sbjct: 284 MVLLTKRAIELLRLQ------------------------KKFTFMGGNDAFVFTNPYDDL 319 Query: 290 -HFTVDSIR-QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 + SIR + W ++ G+R+R+ Y RHT A L AG + A QMGH+ +M Sbjct: 320 PWHSEKSIRNKYWIPTLRALGIRYRRPYNMRHTNATMRLMAGQKIGYAAGQMGHS-IEMF 378 Query: 348 FQVYGKWMS 356 + Y +W++ Sbjct: 379 TRTYARWLN 387 >UniRef50_B8I354 Integrase family protein n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I354_CLOCE Length = 413 Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 72/326 (22%), Positives = 143/326 (43%), Gaps = 23/326 (7%) Query: 38 LTIKELAEKFLALKETEVAKTSLNTYRAVIKN-ILSIIGEKNLASSINKEKLLEVRKELL 96 +T+ E E +L K+ + + Y ++K +L ++G+ K+++++ L Sbjct: 70 MTMSEFIELWLDKKKNNIESKTHQGYSGLLKGRVLKVMGDT---------KIIDLKPLHL 120 Query: 97 TGYQIPKSNYIVTQPGR----SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 + + + GR S ++ +Y LNA+F GV G + +NP + P K Sbjct: 121 INFYENLQELGIREDGREGKLSTNSILHYHRALNAMFGDGVRWGLIKENPCSKVRPPKVV 180 Query: 153 RTIPDPLSREEFIRLIDACRNQ--QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 + L ++ +LI A N+ + + TG+R GELC L W++++LK+ T+++ Sbjct: 181 KKEMSCLDEDQIPQLISALCNEPIDISTFITLDLVTGLRRGELCGLQWDNVNLKDNTIVV 240 Query: 211 RRNLAKDRFT-----VPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 + ++ T PKT++ ++ I L S L ++ + +++ Sbjct: 241 EQAVSYTPETGTIIKTPKTKSSIRKIT--IPKTTSDLLSIYRKWWLEQKIKVGDQWQKSA 298 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWS 325 R E +K ++ G D++ + + IKR L + + RHT A Sbjct: 299 REEVEKNGQTWEDPEYLFTTWDGYVMHPDTLTKTFKKFIKRNNLPDIRLHDLRHTAATML 358 Query: 326 LTAGANPAFIANQMGHADAQMVFQVY 351 + AG N +A +MGH + + +Y Sbjct: 359 IHAGLNIRAVAARMGHENPNVTLAIY 384 >UniRef50_A4ILC8 DNA integration/recombination/invertion protein n=1 Tax=Geobacillus thermodenitrificans NG80-2 RepID=A4ILC8_GEOTN Length = 387 Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 110/264 (41%), Gaps = 22/264 (8%) Query: 114 SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRN 173 S T+N Y L +F V+ +L NP + + KE D E RL+ C Sbjct: 137 SEATINYYRRILKNIFNRAVEWKFLQVNPAEKLPKEKEDIGKGDVYDENE-TRLLLKCLE 195 Query: 174 QQA---KNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA----KDRFTVPKTQA 226 ++ + + +++ G+R GEL AL WEDIDL++GT+ ++ +L+ K F Sbjct: 196 KEDLKWRLYFTLALTCGLRKGELLALQWEDIDLESGTLYVKHSLSYTKEKGFFLKEPKSK 255 Query: 227 GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKN 286 + R I + + L+ + KE + D E FVF A Sbjct: 256 KSKREIAIPSFVLPLLKKYKNVRLREKEKLQD-------EWEGGNYNFVF-----ATWNG 303 Query: 287 YGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 H + R W+ +KR LR+ + + RHT A L G N ++ ++GH+ ++ Sbjct: 304 KPHHHSYP--RTKWERFLKRNNLRYIRPHDLRHTSATIMLNNGVNYKTVSERLGHSSTRI 361 Query: 347 VFQVYGKWMSENNNAQVALLNTQL 370 F Y E + + + Q Sbjct: 362 TFDFYVHRTKEADRSAAECFDNQF 385 >UniRef50_A7H224 Phage integrase n=4 Tax=Campylobacter RepID=A7H224_CAMJD Length = 293 Score = 73.9 bits (180), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 113/243 (46%), Gaps = 35/243 (14%) Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAK-- 177 +Y+ LN +F+ +D+ L+ NP + I + I +P S E ++++ N K Sbjct: 67 HYLNILNQIFKLALDDDLLSKNPCENIKIIYFKPKI-NPFSSFEVNQILEKSLNYNYKLQ 125 Query: 178 NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRF--TVPKTQAGTNRVIHLI 235 + YTG+R GE+ AL ++IDL+ + I N + RF PKT ++ Sbjct: 126 IFLKIGFYTGMRTGEILALKIKEIDLEKRIIYI--NSTRSRFGEGTPKTFYSIRKI---- 179 Query: 236 KPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDS 295 P + L + + LS ++ T++F+ + + K Y D F Sbjct: 180 -PIFNILYTDLKNFVLSNKN----------------NTYLFETQYN---KPYRDDFV--- 216 Query: 296 IRQMWDAAIKRAGLRHRKSYQSRHTYAC-WSLTAGANPAFIANQMGHADAQMVFQVYGKW 354 + + +K L +R+ Y RHT+A + L + +P ++ +GH+ +MV++VY K+ Sbjct: 217 FCKFYKQILKDLSLSYRRPYTMRHTFATNFLLNSNLSPLELSKILGHSSPEMVYKVYVKY 276 Query: 355 MSE 357 + + Sbjct: 277 IDD 279 >UniRef50_D1SSC0 Putative uncharacterized protein n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SSC0_9BURK Length = 125 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 29/59 (49%), Positives = 44/59 (74%) Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 W A++ G+R R++YQ++HTY +L+ GANPA+IA QMGH +A+M+F VY KW+ + Sbjct: 36 FWQPALRACGIRRRRAYQTQHTYGTNALSEGANPAYIARQMGHKNAKMLFIVYAKWIDD 94 >UniRef50_B7WRL6 Bbp50 n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WRL6_COMTE Length = 323 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 86/203 (42%), Gaps = 27/203 (13%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNT 62 L + + I+ G F + FP G T+ + +L++K E ++L Sbjct: 49 LLAEIKLKIRAGNFVMREYFPEG------GTVAAGTTVAHQLDHWLSVKVAE--NSTLAG 100 Query: 63 YRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 Y + IK IGEK + S++ +L I T+P S TVNNY+ Sbjct: 101 YLSAIKFWKPFIGEKQV-SALKHSDILRA---------------IKTRPDLSGKTVNNYV 144 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAK---NL 179 + L + V + L +NP + K R PDP REE ++ID R A NL Sbjct: 145 SALRSAMDLAVLDKLLTENPVAAVPSAKWQREPPDPFDREEVEQIIDYARANFAPTVANL 204 Query: 180 WCVSVYTGVRPGELCALGWEDID 202 ++G+R E+ AL W ID Sbjct: 205 IAFRFFSGLRTSEMVALRWHSID 227 Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 2/81 (2%) Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 W +K G+R+R RHTYA L AGA PA+ A QMGH+ A+M VY KW+ + Sbjct: 237 FWVPMLKALGIRYRPPNHMRHTYATMLLMAGATPAYAAKQMGHS-AEMFLSVYSKWLDDG 295 Query: 359 -NNAQVALLNTQLSEFAPTMP 378 + + A L + + + +P P Sbjct: 296 QGDIEQAKLESFIGQNSPGTP 316 >UniRef50_Q30RZ4 Phage integrase n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30RZ4_SULDN Length = 392 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 43/244 (17%) Query: 128 VFQFGVDNGYLADNPFKGISPLKE---SRTIPD------PLSREEFIRLI--DACRNQQA 176 + Q N + NP + + K+ +T+ D P + E I+LI D + Sbjct: 158 ILQDAFINEIIVKNPMQLVKAPKQKSKQKTLFDEEEDVMPFNNAE-IKLILEDTQLFEHN 216 Query: 177 KNLWCVSVYTGVRPGELCALGWEDI--DLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHL 234 KN + + ++TG+RPGE AL W+DI D K +M R KD PKT + R + + Sbjct: 217 KNFYKLMLFTGMRPGEAVALRWQDILFDKKQIKIMQTRVAGKD--GTPKTMSSM-RYVDI 273 Query: 235 IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVD 294 + ++ L SQ LT KE++ Y R+ K+ +F+ D Sbjct: 274 LPQTLEVLLSQQKLTG-DKEYLF------YTRSGKR-------------------YFSHD 307 Query: 295 SIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKW 354 ++ + + R ++ R Y RHT+A ++ G + +++ +GH D + Y K+ Sbjct: 308 TLAASFKRLLTRNKIKERVLYNLRHTFASQMISQGVDIVWVSKTLGHKDVSITLSTYTKF 367 Query: 355 MSEN 358 + E+ Sbjct: 368 IQED 371 >UniRef50_B6FRP3 Putative uncharacterized protein n=4 Tax=Bacteria RepID=B6FRP3_9CLOT Length = 387 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 29/263 (11%) Query: 105 NYIVTQPGRSAVTVNNYMTN----LNAVFQFGVDNGYLADNPFKGISPL--KESRTIPDP 158 N IV Q + + +N N L + VD L N K I+ + KE + Sbjct: 118 NLIVMQEAFNKLKTDNARKNSKKILVDMLNRAVDTDLLVKNVAKQINTVIAKEEKKERRV 177 Query: 159 LSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL---- 214 L+ E ++ + +NL+ +++ TG+R GEL AL WEDID K + ++ L Sbjct: 178 LTIRETELFLEQAKGTFYENLFILALETGLRVGELSALQWEDIDFKKKVIHVKHTLCYFS 237 Query: 215 --AKDRFTVPKTQAGT-NRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 K F + T+ R I L AI++L+ Q +L K+ II G+T K++ Sbjct: 238 KNGKYVFEMHDTKTNNGKRTIPLTAKAINSLKCQ----KLQKQEII-----LKGKTAKEE 288 Query: 272 CTFVFQPEVSARVKNY-GDHFTVDSIRQMWDAAIKRAGLRHR--KSYQSRHTYACWSLTA 328 FQ V N F ++ Q+ + +AG+ + RHT+A ++ Sbjct: 289 ----FQNLVFVTKNNQPTQQFLINQCMQLVIQNMNKAGIDFSPFTLHTLRHTFATRAIEC 344 Query: 329 GANPAFIANQMGHADAQMVFQVY 351 G NP + +GH QM +Y Sbjct: 345 GMNPKTLQKLLGHGTLQMTMDLY 367 >UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=XERC_THEYD Length = 301 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 46/259 (17%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC 171 G+S TV ++ L + F + G++ NP + +S +K R +P L+ ++ +L++A Sbjct: 63 GKSKTTVARKLSTLRSFFSYLYSEGFIKINPARVVSSVKIKRALPKFLTVDDAFKLVEAP 122 Query: 172 RN-----QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQA 226 Q+ K + + +G+R ELC L ED+DLK G + +R K+R VP Q Sbjct: 123 SEDKFTVQRDKAILELFYSSGIRVSELCGLNLEDLDLKEGLIKVRGKGKKERI-VPVGQK 181 Query: 227 GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKN 286 K A+ + + R+ K+ +D E + N Sbjct: 182 A--------KEALKKYLAIRQILRIKKKLSLD--------------------ETPLFINN 213 Query: 287 YGDHFTVDSIRQMWDAAIKRAGLRHR-KSYQSRHTYACWSLTAGANPAFIANQMGHA--- 342 G + +R++ + K G+ + + RHT+A L GA+ I +GHA Sbjct: 214 RGQRISDRQVRRIVEKYAKFIGVLEKIGPHTLRHTFASHLLMEGADLRVIQELLGHASLS 273 Query: 343 --------DAQMVFQVYGK 353 D + + +VY K Sbjct: 274 TTQIYTHVDLKHLIEVYDK 292 >UniRef50_Q72GH2 DNA integration/recombination/invertion protein n=5 Tax=Thermus RepID=Q72GH2_THET2 Length = 392 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 32/265 (12%) Query: 108 VTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS-PLKESRTIPDPLSREEFIR 166 V + G + TVN + L A+F+ + +A NP + + L + L +E R Sbjct: 136 VAEAGYAPRTVNRVLMRLKALFREALRLELVARNPAEAVRLRLPKGEKTARALEPQEVAR 195 Query: 167 LIDACRNQQAKN---LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----F 219 L++A ++K+ L + + TG+R GE AL W DIDL+ G + + R+ K R F Sbjct: 196 LLEAAEASRSKDMALLLRLMLETGLRRGEALALQWRDIDLEAGELTVWRSWTKARGKGAF 255 Query: 220 TVPKTQAGTNRVIHLIKPAIDA-LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQP 278 + PKT +V + R + L RL+ E +D F G F Sbjct: 256 SEPKTPTAKRKVPLPRGLLLRLKARREELLERLTPEE-VDGLFLVGGVKPVDPDAF---- 310 Query: 279 EVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQ 338 +H+ +R++ +RAGL + + RHT+A +L+ G ++ + Sbjct: 311 ----------NHY----LRRL----AERAGLGRVRVHDLRHTWATLALSRGVPLEVVSER 352 Query: 339 MGHADAQMVFQVYGKWMSENNNAQV 363 +GHA + VY + E V Sbjct: 353 LGHASPTITLNVYRHLLEEERRGWV 377 >UniRef50_Q4KFM1 Integrase n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KFM1_PSEF5 Length = 154 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 6/159 (3%) Query: 201 IDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVH 260 +DL GT+ RR+ + + V KT+ T R + L+ PA DAL+ L R K +D+ Sbjct: 1 MDLAQGTVTFRRSKVRGAYRVTKTRRST-RKVRLLAPAWDALQKIDALNRKRKAETVDIV 59 Query: 261 FREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHT 320 R+ + K FVF S + + D D + + + AG+ + Q R+T Sbjct: 60 ERDNKTVRQHKLHFVFLNTKSG-LPHVSDFVVRD---RFFKPHLLAAGVYYHGPGQCRNT 115 Query: 321 YACWSLTAG-ANPAFIANQMGHADAQMVFQVYGKWMSEN 358 YA LT G A+ +IA QMGH +A M+ Q YG W++E+ Sbjct: 116 YASQLLTTGVASIDWIAEQMGHTNANMIRQHYGTWINED 154 >UniRef50_UPI0001C3746F phage integrase family site specific recombinase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3746F Length = 366 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 79/317 (24%), Positives = 144/317 (45%), Gaps = 36/317 (11%) Query: 38 LTIKELAEKFLALKETEVAKTSLNTYRAVIKN-ILSIIGEKNLASSINKEKLLEVRKELL 96 LT++E A+++L+ V ++S Y ++ N IL I+G + ++S L R Sbjct: 64 LTVREAADQWLSAARLRVKESSYANYENILNNHILPILGGEYISS------LTTGRINDF 117 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP 156 Y++ + Q G SA TV + MT +V ++ + + F P ES Sbjct: 118 IHYKLTNGR-LKGQGGLSAKTVRDIMTVYRSVERYVYREYGIRETNF--TMPKTESGN-A 173 Query: 157 DPLSREEFIRLID-ACRNQQAKNLWCV-SVYTGVRPGELCALGWEDIDLKNGTMMIRRNL 214 D L+ EE +L +N NL + ++TG+R GELC L WEDID + T+ ++R + Sbjct: 174 DVLNCEERKKLESYLIKNMDRTNLAVLLCLFTGLRIGELCGLKWEDIDFEKNTLSVKRTV 233 Query: 215 AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTF 274 + ++ G ++VI I + +S+ ++ + + R++ + F Sbjct: 234 QR------VSRNGKSQVI------IGSPKSRTSIRTVPIPIFMMALLRKFRSIDS---LF 278 Query: 275 VFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAF 334 V + N +++ + A +K G+R+ + RHTYA + G +P Sbjct: 279 V--------ITNLSKPTEPRTMQNRFKAILKLCGIRNVNFHSLRHTYATVCIEKGFDPKA 330 Query: 335 IANQMGHADAQMVFQVY 351 ++ +GHADA + Y Sbjct: 331 LSELLGHADASITLNRY 347 >UniRef50_D0ADR3 Predicted protein n=2 Tax=Enterococcus faecium RepID=D0ADR3_ENTFC Length = 382 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 41/258 (15%) Query: 113 RSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDP-----LSREE---F 164 + V ++ N + + + + GYL DNP K I+ K ++ + S+EE F Sbjct: 126 KKFVLYREFINNASRICDYAIKLGYLQDNPLKKITVPKRKVSVHEEDTLNFFSKEELEIF 185 Query: 165 IRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKT 224 ++ ++ ++ + + + +TG+R GEL AL W+DID + + I + LA+ Sbjct: 186 LKSVEKKKDIRMYSFFRTLAFTGMRVGELLALTWKDIDFNDNYIKINKTLAR-------- 237 Query: 225 QAGTNRVIHLIKPAIDALRSQMTLTRLSKEHI-ID---VHFREYGRTEKQKCTFVF---- 276 G NR +++ +P T+ SK I +D ++ + R E++K Sbjct: 238 --GKNRRLYVEQPK----------TKNSKRDIPVDDETMNILKKWRLEQRKWLLTLGINT 285 Query: 277 ---QPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPA 333 V + KN ++ + R+ + IK+ L+ + RHT+A L AGAN Sbjct: 286 LSKNQLVFSNQKN--EYLQLSKPRKWLEVIIKQNNLKRITIHGLRHTHASLLLEAGANIK 343 Query: 334 FIANQMGHADAQMVFQVY 351 + ++GH+ Q+ +Y Sbjct: 344 DVQERLGHSSIQITMDLY 361 >UniRef50_B1QG70 Phage integrase n=1 Tax=Clostridium botulinum Bf RepID=B1QG70_CLOBO Length = 390 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 80/343 (23%), Positives = 137/343 (39%), Gaps = 51/343 (14%) Query: 47 FLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNY 106 F +K ++ TS Y + N + EK+ + I+ EKL + I + Sbjct: 74 FEVVKVGQIKPTSFARYEGIFSNYI----EKSPIACISLEKLQPI--------DIQRYYN 121 Query: 107 IVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKG---ISP-----LKESRTIPDP 158 + + G+S+ +NN L + VD+GY+ NP G I P +E++ +P Sbjct: 122 TLFKSGKSSNIINNLNKLLKQFLNYCVDSGYILKNPCDGKKVIIPKDNKIRRENKILP-I 180 Query: 159 LSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA--- 215 SR+E I ++ + + + + +S TG+R GE+ L DID N + IRR + Sbjct: 181 FSRDEVINILRQKEDTKIRYISLISYATGMRKGEILGLKESDIDYTNNEIHIRRAMVTTY 240 Query: 216 ---------KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDV--HFREY 264 K+ F + R I L K I + + ++ L K I+ F E Sbjct: 241 IFDENGKKHKETFLDDTKTYTSERDIPLPKSLIPIINAAIS---LKKRDILKAGNSFNEN 297 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACW 324 + +F E G++ +I + W +KR + H+K + RHTYA Sbjct: 298 NK------DLLFLSE-------NGEYIEASNIDKSWIYFLKRCRVNHKKFHALRHTYATI 344 Query: 325 SLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLN 367 I+ +GHA + Y M + + L+ Sbjct: 345 QFENEIPLLTISKLLGHASIDITASTYTHVMKKEKEKAIETLS 387 >UniRef50_B7AAK4 Integrase family protein n=3 Tax=Thermus aquaticus Y51MC23 RepID=B7AAK4_THEAQ Length = 416 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 80/346 (23%), Positives = 137/346 (39%), Gaps = 49/346 (14%) Query: 36 QDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVR--- 92 + +T+++ A+ +L K EV +L YR + L + + + + +L V Sbjct: 69 EAITVRDFAQSWLERKAREVRPRTLFLYREELAYALPSLEDPQAKDPLGRARLQAVNPRD 128 Query: 93 -KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGI---SP 148 + ++ G + G S TV LNA+F+ + +A NP + Sbjct: 129 IRAVIDG---------LLNRGLSLRTVKKVREKLNAIFEEALALELVARNPVAPVKVRGG 179 Query: 149 LKESRTIP----DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLK 204 L++ R P + E + +DA + + + + + G+R GE L WEDIDL+ Sbjct: 180 LEQEREKPGRTLETWEIEALLAALDAHPDPRTALVLRLCLSCGLRKGEALGLQWEDIDLE 239 Query: 205 NGTMMIRRNL----AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVH 260 G + +RR A+ + PKT +G R + + TL RL Sbjct: 240 KGLLYVRRTWSFDGARTAISDPKTASG-RRAVPI---------PSKTLARLES------- 282 Query: 261 FREYGRTE---KQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQS 317 +RE+ R +F P V N + ++ + +KR GL + + Sbjct: 283 YREWWRERLGSYPPPSFWVFPGV-----NGQEPLGYNTPNRALTRILKRLGLPPARVHDL 337 Query: 318 RHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQV 363 RHTY L GA ++ +MGH + F Y SE A + Sbjct: 338 RHTYGSMLLARGAPVELVSERMGHTSPSITFNNYRHMFSEERQAHI 383 >UniRef50_C9C7Z3 Phage integrase n=2 Tax=Bacilli RepID=C9C7Z3_ENTFC Length = 344 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 68/266 (25%), Positives = 111/266 (41%), Gaps = 53/266 (19%) Query: 118 VNNYMTNLNAVFQFGVDNGYLADNPFKGIS-PLKESRTIPDP----LSREEFIRLIDACR 172 + NY +N VF + + NP K +S P E+ I D ++EE I ++A R Sbjct: 87 IKNYTSN---VFDYAASLQIITSNPMKLVSIPRGEALDIEDKNIEFYTKEELIEFLEAIR 143 Query: 173 NQQAKNLWCVSV--YTGVRPGELCALGWEDIDLKNGTMMIRRNLAK---DRFTV--PKTQ 225 N + S+ +TG+R GE AL W DID K+ T+ I + + + R V PK++ Sbjct: 144 NDDDERYLFFSLLAFTGIRKGEAFALTWSDIDFKSKTLNINKTVTRGYQGRLIVNTPKSK 203 Query: 226 AGTNRVIHLIKPAIDALR----SQMTLTRLSKEHIIDVH----FREYGRTEKQKCTFVFQ 277 +G R I+L I LR T+ + E++I H + + Sbjct: 204 SG-KRKIYLDNDLISLLRKYYTKNKTIVTIQSENLIFHHDGLLYNPTVSRSWLNVIYKHH 262 Query: 278 PEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIAN 337 PE++ R+ +G RHT+A +GA+ + Sbjct: 263 PELTKRITTHG----------------------------FRHTHASLLFESGASLKDVQE 294 Query: 338 QMGHADAQMVFQVYGKWMSENNNAQV 363 ++GHAD Q +Y ++E N +V Sbjct: 295 RLGHADIQTTSNIYTH-VTETQNKKV 319 >UniRef50_A0JQR3 Phage integrase n=3 Tax=Lactobacillus salivarius RepID=A0JQR3_LACS1 Length = 381 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 34/239 (14%) Query: 136 GYLADNPFKGISPLKESRTIPDP----LSREEFIRLIDACRNQQAK--NLWCVSVYTGVR 189 G + NP + K+ +I D +++E + +D ++ K L+ + Y+G+R Sbjct: 151 GMIESNPMLYVIKPKKQASISDKHDNYYNKDELKKFLDVAKDTSLKKYTLFRLLAYSGMR 210 Query: 190 PGELCALGWEDIDLKNGTMMIRRNLAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQ 245 GE AL W D+D KN T+ I + LA+ + PKT+A +NRVI L I L+ Sbjct: 211 IGECLALTWHDLDYKNNTIAINKTLARTNNGIKIQTPKTKA-SNRVISLDNETIQVLKMW 269 Query: 246 MTLTRLSKEHIIDVHFREYGRTE----KQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWD 301 R + ++ V + K +F+ P V +K Sbjct: 270 QLEQR---KQLLKVGINAMDSKQLIFSNGKNSFIIVPTVRLAIKQIA------------- 313 Query: 302 AAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 K+AG+ ++ RHT+A +G + + ++GH++ Q +Y M E + Sbjct: 314 ---KKAGIHSITTHGFRHTHATLLFASGLDIKQVQARLGHSNVQTTLNIYTHAMKEKQD 369 >UniRef50_A4XMZ7 Phage integrase family protein n=3 Tax=Clostridia RepID=A4XMZ7_CALS8 Length = 327 Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 79/338 (23%), Positives = 135/338 (39%), Gaps = 59/338 (17%) Query: 51 KETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQ 110 K+ + ++ Y ++I N ++ SI KL ++R E L K + Sbjct: 15 KKQTLRPSTFQDYESLINN--------HIVPSIGHYKLKDLRPEHLQALYNSKH-----E 61 Query: 111 PGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDP--------LSRE 162 G S T+ + L++ + NG + N + E+ T+P L+ E Sbjct: 62 SGLSLSTIKHIHVILHSALDQALKNGLVVRN-------VSEATTLPKAKTKKEIRVLTLE 114 Query: 163 EFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR---- 218 E R + A ++ K + +++ +GVR GEL AL W+ ++LK GT+ I+R+L + + Sbjct: 115 EQKRFVAALEGERLKPAFLLALASGVRLGELLALKWDCVNLKEGTITIKRSLRRIKTYDK 174 Query: 219 ---------FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 F PKT AG + P + ++ KEH R+ EK Sbjct: 175 SLPTKTMLAFQEPKTAAGIRTI-----PVPPVILEEL------KEH------RKRQLEEK 217 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG 329 K +++ G + +++ I++A L + RHTYA L A Sbjct: 218 LKAGSLYEDNNLVFATELGTPIEPRNFLRVFYRIIEKANLD-INFHALRHTYATRLLEAN 276 Query: 330 ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLN 367 +P + +GH D +Y M E A LN Sbjct: 277 EHPKVVQELLGHNDISTTLNIYSHVMPEIKKAAAMKLN 314 >UniRef50_B6BNI8 Phage integrase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNI8_9PROT Length = 347 Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 51/246 (20%), Positives = 105/246 (42%), Gaps = 33/246 (13%) Query: 125 LNAVFQFGVDNGYLADNPFKGISPLKESRTIPD----PLSREEFIRLIDACRNQQAKNLW 180 N +F + + +A NP +S +K+ + I P ++E +L+ + ++ + ++ Sbjct: 128 FNVMFNDALADELIARNP---MSLIKKPKNISVNEILPFKQDEIFKLLGHIQ-ERMRAVF 183 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAID 240 + +TG+R GEL AL W DID +N + +RR ++ ++PKT++ Sbjct: 184 AIGFFTGMRTGELVALKWSDIDFENNIIKVRRAKRQNVESLPKTKSSIRD---------- 233 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 + L L + EY K F +S R W Sbjct: 234 IDIIDILLPYLQNHLKFKLDDSEYMFNSLHKRPFTCFHSIS---------------RTYW 278 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 ++ + +R YQ RHT+A ++ G + +++ +GH ++ + +Y +++ + Sbjct: 279 RPIFEKIDIAYRNPYQMRHTFASMMISNGEDILWVSKMLGHTNSAITLTMYARYIENKDK 338 Query: 361 AQVALL 366 + A L Sbjct: 339 KRGAFL 344 >UniRef50_D2S5L4 Integrase family protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5L4_9ACTO Length = 404 Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 80/332 (24%), Positives = 131/332 (39%), Gaps = 50/332 (15%) Query: 39 TIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTG 98 T+ ++L +K E T++ +YRA + E+ + +I + E+R E + Sbjct: 44 TVASFLARWLQVKAGEAKPTTVRSYRAHV--------ERVIVPAIGHVPIEELRAEHVEQ 95 Query: 99 YQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDP 158 + +N GR VTV L + +GV L N ++P R P Sbjct: 96 LLVDAAN------GRGPVTVRRIHATLRSALSYGVKTRRLPFNVASNVTPPNGIRPEVQP 149 Query: 159 LSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL---- 214 S E + + L+ V G+R GE L W D+DL N T IR+ + Sbjct: 150 WSAAELAAFLRHVETDRLGPLFEVIAACGLRRGEALGLRWSDLDLANRTARIRQTIVDVG 209 Query: 215 AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKE------HIIDVHF-REYGRT 267 + +F+ PKT++ + + L + A+ AL L ++ H D+ F RE G Sbjct: 210 GRLQFSTPKTRS-SEATVPLTERAVQALLQVRLGQDLDRQGWGGAYHAHDLVFARENG-- 266 Query: 268 EKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLT 327 +PE + R + A K AGLR + + RH A L Sbjct: 267 ------APLRPEYATR---------------RFVALTKAAGLRWVRLHDLRHGAASLMLA 305 Query: 328 AGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 AG A ++ + H+ + YG +SE+ Sbjct: 306 AGVPMAIVSKVLRHSSIGITVDTYGH-LSEDT 336 >UniRef50_D0XDY6 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XDY6_VIBHA Length = 457 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 79/313 (25%), Positives = 131/313 (41%), Gaps = 26/313 (8%) Query: 48 LALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYI 107 L KE VA+++ N + ++I+ +G+K L S + E + + LL Sbjct: 82 LNTKEPVVAESTFNGMKTHARHIIKHLGDK-LLSELTIEDIDNLTTSLL----------- 129 Query: 108 VTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRL 167 + G+ +N T L AV +G+ A + I LK P P + +E L Sbjct: 130 --KQGKKGKVINGCYTLLRAVCSKAYSSGHQATDLMNNIENLKVVSDDPFPFTEDEVRNL 187 Query: 168 IDACRN-QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMM----IRRNLAK--DRFT 220 + + +K + + T +R EL WE+++ + + +LAK + + Sbjct: 188 LVTDTDFLMSKEMVAFGIVTALRISELICTSWENVEFYTEESIEKCRLYVDLAKPLNNYK 247 Query: 221 VPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEV 280 V KT+ + R I L A LR +T IDV R+ +++K F+F E Sbjct: 248 VTKTEE-SERTIELSAEAAQILRRLEPVTGSKASISIDVVQRDNITIKREKRRFIFFNEQ 306 Query: 281 SARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMG 340 + F +Q + A + AG+ HR Q RHT A G + A+IA +G Sbjct: 307 TGYPWLNPKQFA----KQFFTAFLSNAGVAHRGPNQLRHTGASIQFNNGVSVAWIAELLG 362 Query: 341 HADAQMVFQVYGK 353 H D +V + Y K Sbjct: 363 HRDVSIVEKHYAK 375 >UniRef50_B6FTU6 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTU6_9CLOT Length = 353 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 79/337 (23%), Positives = 129/337 (38%), Gaps = 50/337 (14%) Query: 37 DLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 D T ++ F+ KT++ +Y +K+IL + L S IN++ ++ + ELL Sbjct: 61 DTTFGSVSNDFIEENTPRRRKTTIRSYNIALKHILPTFKDIPL-SEINEKMIILWQNELL 119 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPL-KESRTI 155 S V +N T ++++G L NPF GI + K S Sbjct: 120 -------------NTELSEVYINKIDTMFRTIYKYGAKRCGLRSNPFDGIEKIGKASNKS 166 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 + E++ I + + V Y G+R GEL AL DIDL M I ++L Sbjct: 167 LHFWTHEQYNAFIPYIEQPTTRMAFQVLYYCGIRIGELFALTAGDIDLDEQIMHITKSLQ 226 Query: 216 K----DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 + D T PKT+ G R I L + L + M++ Y + + Sbjct: 227 RMERQDVITPPKTRKGI-RDITLPNFLVKELENYMSMI--------------YDCNGETR 271 Query: 272 CTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGAN 331 + + + +K Y + V IR + RH++ + G + Sbjct: 272 LFEISKQSLYYPMKKYSEIARVPRIR----------------IHDIRHSHVALLIEKGVS 315 Query: 332 PAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNT 368 P IA ++GH D ++ YG LLNT Sbjct: 316 PLAIAERLGHDDIKITLGTYGHLYPNKQREIADLLNT 352 >UniRef50_Q1CP24 DNA integration/recombination/inversion protein n=7 Tax=Streptococcus RepID=Q1CP24_STRPF Length = 387 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 42/211 (19%) Query: 157 DPLSREEFIRLIDACRNQQAKNLWCVSVY------TGVRPGELCALGWEDIDLKNGTMMI 210 DP + F+ ++ ++++ NL+ +V TG+R GE CAL W DIDL+NGT+ I Sbjct: 183 DPSDLKSFLEHLETSQHKRY-NLYFDAVLYQLLLSTGLRIGEACALEWGDIDLENGTIAI 241 Query: 211 RRNLAKDR--FTVPKTQAGTNRVIHLIKPAIDALR-SQMTLTRLSKEHIIDVHFREYGRT 267 + K+ + KTQ+G NRVI + K + +L+ QM Sbjct: 242 NKTYNKNLKFLSTAKTQSG-NRVISVDKKTLRSLKLYQM--------------------- 279 Query: 268 EKQKCTFVFQPEVSARVKNY------GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTY 321 +Q+ F EV ARV +F + D K AG+ + RHT+ Sbjct: 280 -RQRQLF---NEVGARVSEVVFATPTRKYFNASVRQSALDTRCKEAGIERFTFHAFRHTH 335 Query: 322 ACWSLTAGANPAFIANQMGHADAQMVFQVYG 352 A L AG + + ++GHA+ M YG Sbjct: 336 ASLLLNAGISYKELQYRLGHANISMTLDTYG 366 >UniRef50_Q1BC50 Phage integrase n=4 Tax=Mycobacterium RepID=Q1BC50_MYCSS Length = 442 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 108/252 (42%), Gaps = 18/252 (7%) Query: 111 PGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDA 170 PG + TV N ++ V Y A NP + P K SR+ ++E+ + + A Sbjct: 183 PGLAPKTVRNIHAMIHRAMADAVAWKYKAHNPAANVRPPKRSRSRRTVWNQEDIQKFLRA 242 Query: 171 CRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTV---PKTQAG 227 + + +L+ + + TG+R G++C L W D+DL + + N R V + +AG Sbjct: 243 VSHDRFASLFLLELTTGIRRGQICGLRWHDVDLDVREVTVHDN----RVVVAGHARDKAG 298 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 AID ++T L K +RE+ E+ + P Sbjct: 299 GKTRNADQTIAID----RVTAAALRK-------WREHQNEERAFFGADYHPGNYVFTFED 347 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 G DSIRQ +D AGL + RH+YA +L AG NP ++ ++GHAD Sbjct: 348 GRPPHPDSIRQRFDRLAAVAGLPRITFHDLRHSYATAALKAGVNPKIVSERIGHADVGFF 407 Query: 348 FQVYGKWMSENN 359 Q Y + ++ Sbjct: 408 LQTYAHVLKNDD 419 >UniRef50_B0PGN2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PGN2_9FIRM Length = 526 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/245 (24%), Positives = 104/245 (42%), Gaps = 33/245 (13%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS-PLKESRTIPDPLSREEFIRLIDA 170 G S V + + V G + NP G P K R + L REE R + Sbjct: 143 GLSDSMVRGLHAACRSALEKAVQEGLIRTNPAVGCKLPPKRGREM-QVLGREELQRFLIQ 201 Query: 171 CRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL----AKDRFTVPKTQA 226 + + L+ + + TG+R GEL AL W+D+D + G + + + + + + +VPKT+A Sbjct: 202 AQAEGYFELFLLDLCTGLRRGELLALQWDDLDFRTGALTVNKQVYEVKGRLQVSVPKTRA 261 Query: 227 GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKN 286 R++ + P + ++V R Y T + ++F V V Sbjct: 262 SIRRLV--LPPGV-----------------VEV-LRAYRETVDSR--WMFPSPVKEDVP- 298 Query: 287 YGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 T ++R+ ++RAG + + + RHT+A SL G + ++ +GH A Sbjct: 299 ----MTPGAVRRRLQIILERAGCKRIRFHDLRHTFATLSLENGMDVKTLSAMLGHVSAAT 354 Query: 347 VFQVY 351 +Y Sbjct: 355 TLDIY 359 >UniRef50_A4XMV7 Phage integrase family protein n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMV7_CALS8 Length = 332 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/322 (22%), Positives = 136/322 (42%), Gaps = 51/322 (15%) Query: 38 LTIKELAEK-FLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 +T KE + F A T V ++ YR ++K L IG K L NK K L+++ Sbjct: 36 ITFKEFVDYWFEAYASTAVKPSTQKRYRQLLKPALRAIGNKPL----NKVKPLDIQ---- 87 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP 156 + YI +S T+ L+ +F+ Y++DNP K + P + + Sbjct: 88 -------NIYIALAGTQSNCTILKLHRLLHEIFKHAQMWEYISDNPVKKVVPPTPEKKVF 140 Query: 157 DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK 216 D E R ++ +++ ++++TG+R GE+ +L W D++ + + I ++ K Sbjct: 141 DVWDVETAKRFLEIIKDEPIYYPALIALHTGMRAGEILSLKWCDVNFETRVISIVKSERK 200 Query: 217 DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHII--DVHFRE----YGRTEKQ 270 +R L++ T+ SK + D+ ++E Y T+ + Sbjct: 201 NR----------------------GLKTVNLKTKTSKRAVYMNDILYKELKNLYEITKPK 238 Query: 271 KCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGA 330 FV P + + TV+ + + + +K+ + + RHT+A L+ G Sbjct: 239 PDDFVC-PRLPT------GNLTVNYLSRKFKKLVKKHNFPLIRFHDLRHTFATLMLSLGV 291 Query: 331 NPAFIANQMGHADAQMVFQVYG 352 N +A +GH+D ++ Y Sbjct: 292 NTKIVAEILGHSDIKLTADTYS 313 >UniRef50_B5E8A2 Integrase family protein n=1 Tax=Geobacter bemidjiensis Bem RepID=B5E8A2_GEOBB Length = 436 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 41/68 (60%) Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 G F ++W A+ AG+ + SY +RH++A WSL G NP + N MGHA QMV Sbjct: 321 GKRFNSSRFSKLWQKAVLTAGIPYVTSYSARHSFAAWSLIIGVNPLRLVNLMGHASKQMV 380 Query: 348 FQVYGKWM 355 ++VYG ++ Sbjct: 381 YEVYGNYV 388 >UniRef50_B7IY65 DNA integration/recombination/invertion protein n=35 Tax=Bacillus RepID=B7IY65_BACC2 Length = 369 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 77/327 (23%), Positives = 137/327 (41%), Gaps = 54/327 (16%) Query: 38 LTIKELAEKFLALKETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELL 96 +T+K+ +L +K + K++ YRA I ++++ IG +++K ++ ++K Sbjct: 63 VTLKDYLNHWLEIKSMSIQKSTFAGYRAFINQHVIPSIG----MVALHKLNVMHIQKCYK 118 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP 156 T +N + R L + V ++ NP K+ +T Sbjct: 119 TAINKGITNNSILLMHRI----------LKSALNLAVKQNIISRNPADFAEIPKKEKTSI 168 Query: 157 DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK 216 + EE + + + + + +++ TG+R GE+ L W+DID + T+ I + Sbjct: 169 QTWTEEEVKKFLAHSQESRYHIGYLLAITTGMRLGEVLGLRWQDIDFEKHTVTINQTSGH 228 Query: 217 DRFTVPKTQAGTN---RVIHLIKPAIDALRSQMTLTRLSKEHI------ID---VHFREY 264 D + KT A TN R I + I AL+ L ++KE + +D ++ E+ Sbjct: 229 DN-KIKKT-AKTNSSKRTIPVPNETIVALKKHKIL--INKEKLRFGSAYLDQDLINCNEF 284 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACW 324 GR K+ HF IR A + G++ K + RHT+A Sbjct: 285 GRIIKRA------------------HFRKSFIR-----ATHKVGIKEIKFHDLRHTHATI 321 Query: 325 SLTAGANPAFIANQMGHADAQMVFQVY 351 L G NP I+ ++GH D M VY Sbjct: 322 LLKQGVNPKIISERLGHTDISMTLSVY 348 >UniRef50_Q859R3 ORF39 n=1 Tax=Thermus phage IN93 RepID=Q859R3_9VIRU Length = 349 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 20/247 (8%) Query: 125 LNAVFQFGVDNGYLADNPFKGISPLKESRTIP-DPLSREEFIRLIDACRNQQAKNLWCVS 183 L A + + L NP + P + P EE R ++A + + L+ + Sbjct: 95 LRAALRDAMRADLLDQNPMDAVDPPRGGAVRPAKAWKPEEVARFLEASKGHRLYPLFALM 154 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALR 243 + T +RPGE AL WED + + +R L +D P G+ I+L P AL Sbjct: 155 LATRLRPGEALALRWEDWE--GDVLHVRHTLRRDGTLGPAKTPGSVAPIYL-DPDTQALL 211 Query: 244 SQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAA 303 + RL +E ++++G +F + G ++ ++ + A Sbjct: 212 AWWR-ERLEEEKASTPDWQDHG--------LMFP-------SSKGTPLEYNNFKRAFYAL 255 Query: 304 IKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQV 363 ++AG+ + RHTY +L AG P +A ++ HAD +VY + M E++ A Sbjct: 256 QEKAGVSRITPHGLRHTYTSLALRAGLPPKVVAARLRHADPTFTVKVYQQLMEEDHRAGA 315 Query: 364 ALLNTQL 370 L+T L Sbjct: 316 LPLDTLL 322 >UniRef50_Q2JGT4 Phage integrase n=4 Tax=Frankia RepID=Q2JGT4_FRASC Length = 431 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 21/217 (9%) Query: 159 LSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD- 217 LS ++ L+ A + + L+ +++Y G+R GE+ L WEDID ++ T+ +R +L + Sbjct: 232 LSADQASHLLKAAAHDRLYALYVLALYLGLRRGEILGLRWEDIDFEDETLAVRHSLQRVG 291 Query: 218 ---RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTF 274 R PKT+ + R + L+ LR +E DV++RE G F Sbjct: 292 GHLRVVAPKTRT-SERTLPLLPLIAKVLREHQARQDAERE-TADVNWRETG--------F 341 Query: 275 VFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAF 334 VF + G D++R+ W GL + + RHT L AG P Sbjct: 342 VFTTAI-------GTPIEPDNLRRSWLPLCGVLGLEGVRFHDIRHTCVTLLLNAGVPPHV 394 Query: 335 IANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + GH+ + ++Y ++ A + L +L+ Sbjct: 395 VREIAGHSAIDVTMEIYAHASLDDKRAALQKLVDELA 431 >UniRef50_A7GY77 ATP synthase C chain (Lipid-binding protein)(Dicyclohexylcarbodiimide-binding protein) n=1 Tax=Campylobacter curvus 525.92 RepID=A7GY77_CAMC5 Length = 276 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 33/209 (15%) Query: 119 NNYMTNLNAVFQFGVDNGYLAD----NPFKGISPLKESRTIPDPLSREEFIRLIDACRNQ 174 N + N+ +VF + + + + NPF + L+ + PLS E R+I + Sbjct: 92 NKRIYNIRSVFSMILKDAVMDELIKRNPFDSVPKLRNEKVEIKPLSLSEVQRVISVA-DP 150 Query: 175 QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHL 234 N+ ++ +TG+R GE+ AL W+ ID + T+ I + + PKTQ R+I + Sbjct: 151 HFANVLKLAFFTGMRTGEMIALRWDKIDFEKETIRIDQAIRCGMLNPPKTQTSI-RIIKM 209 Query: 235 IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVD 294 ++ +AL + L + + + Q T +++P+ Sbjct: 210 LRHVKEAL---LNLKQDNDSEWV---------LPTQNGTMLYEPK--------------- 242 Query: 295 SIRQMWDAAIKRAGLRHRKSYQSRHTYAC 323 ++ + W A+KRAGL + YQ+RHT+A Sbjct: 243 TLNRRWKEALKRAGLEYSVFYQTRHTFAS 271 >UniRef50_B9KYK7 Putative integrase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYK7_THERP Length = 359 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 86/345 (24%), Positives = 147/345 (42%), Gaps = 63/345 (18%) Query: 38 LTIKELAEKFLALKETEVAKTSLNTYRAVIKN-ILSIIGEKNLASSINKEKLLEVRKELL 96 +T++EL E++LA + + YR +++ + ++G L S + ++L Sbjct: 55 VTVRELCERWLATERKRWKPKTYYDYRWHLEHHVYPVLGRVQL-SKLTPDRL-------- 105 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPF-KGISPLKESRTI 155 + + GRSA N L+ F G+ G+L NP + + P ++ I Sbjct: 106 -------QRFFDSLSGRSA---NLTFRLLHRCFVVGIRWGFLGQNPCDRVVPPAYQAPPI 155 Query: 156 PDPLSREEFIRLIDAC--RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 P + + RL C + L +S+ G+R GE+ AL W DIDL+ G + + R+ Sbjct: 156 ELPDA-DALARLFRYCLESDDPYAGLVGLSLLCGLRRGEITALRWSDIDLQTGQLSVVRS 214 Query: 214 --LAKDRF--TVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 R+ T PKT+AG R I++ + I LR Q L K ++E+G Sbjct: 215 GQWIAGRWVETEPKTRAG-RRTIYVGEQGIRLLRRQKALVAQLKLQAGPA-WQEHG---- 268 Query: 270 QKCTFVF-----QPEVSARVKNYGDHFTVDSIRQMWDAAIKR----AGLRHRKSYQSRHT 320 VF QP +RV AA++R +G+ + + RH Sbjct: 269 ----LVFPGPNGQPLSPSRVA----------------AAVQRICKASGVPPLRHHSLRHA 308 Query: 321 YACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVAL 365 A +L AG ++ Q+GHA+ + +VY +S+ A+ Sbjct: 309 SASLALLAGVPLPEVSRQLGHANVSITARVYSHCISDGRRVTEAI 353 >UniRef50_C6MS46 Integrase family protein n=1 Tax=Geobacter sp. M18 RepID=C6MS46_9DELT Length = 356 Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%) Query: 90 EVRKELLTGYQIPKSNYIVTQPG--RSAVTVNNYMTNLNAVFQFGVDN-GYLADNPFKGI 146 E R +LL G T+ G RS T YM L+ F V+ G++ D+P + + Sbjct: 113 ECRDKLLAGK---------TKGGGLRSPATTVRYMAALSHAFSVAVNEWGWVEDSPMRKV 163 Query: 147 SPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCV---SVYTGVRPGELCALGWEDIDL 203 KE R L+ +E RL++A + L+ V ++ TG+R E+ L W+DIDL Sbjct: 164 KKPKEPRGRVRFLTDDERNRLLEAAKRSCNNCLYPVVLLALSTGMRFSEIMNLKWKDIDL 223 Query: 204 KNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFRE 263 K +++ T+ G R + ++ A L + + RL E Sbjct: 224 KRKCLILH-----------DTKNGERRNVPVVNLAHSVLTERSKVRRLGTE--------- 263 Query: 264 YGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYAC 323 VF P +S D ++R+ W AA++ A L + + RH+ A Sbjct: 264 ----------LVF-PSIS-------DPTMPSNLRKSWAAAVRDANLEDFRFHDLRHSAAS 305 Query: 324 WSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + GA A IA +GH MV + Y ++ + VA +N ++ Sbjct: 306 YLAMNGATLAEIAEVLGHKTLAMV-KRYAHLSEQHTSRVVASMNEKI 351 >UniRef50_A6P1X5 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6P1X5_9BACE Length = 322 Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 72/294 (24%), Positives = 121/294 (41%), Gaps = 42/294 (14%) Query: 69 NILSIIGEKNLASSINKEKL---LEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNL 125 +IL +GE L S + E++ LE RK G++ Y PG T+ + L Sbjct: 34 HILPGLGEIQL-SELTVEQVGDFLEERKRF-GGHRPESPEY----PGLGEHTMRHIHRLL 87 Query: 126 NAVFQFGVDNGYLADNP---FKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCV 182 + +G +ADNP F P K S + P E+++ DA ++ + Sbjct: 88 QQCLDQAIRDGLIADNPARAFHHPKPKKVSANVLTPAEVEDYL---DAAERLGHLPMFLL 144 Query: 183 SVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDAL 242 ++ G+R GEL AL W D+D+K T+ I + +R + + T R + L + + L Sbjct: 145 ALTVGLRQGELIALKWSDLDVKARTLTITEKRSVERRELVEYGNDT-RTVSLTEEVVKLL 203 Query: 243 RSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDA 302 R E+ + + F+ A K Y +R++ + Sbjct: 204 RL------------------EHAKHSRSPLMFMH----PATQKPYSPQM----VRRLHNE 237 Query: 303 AIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 I+ AGL H + RHT A SL G + ++ +GH M Q Y +++ Sbjct: 238 IIQEAGLDHIRFADLRHTCAVLSLKNGMDTKEVSQMLGHFRIAMTRQNYAPYLA 291 >UniRef50_B9MQ70 Integrase family protein n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MQ70_ANATD Length = 325 Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 36/253 (14%) Query: 114 SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRN 173 S TV N +++ + + GY+ N + ++ K R LS E+ + A + Sbjct: 75 SPKTVKNIHVIIHSALKQAIKCGYINQNVSEAVALPKVERPEIKTLSSEQVTTFLQAAQT 134 Query: 174 QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR--------NLAKDRFTV--PK 223 + + +YTG+R GEL L W+DID N T+ ++R NL K + PK Sbjct: 135 DSLYPAFLLELYTGLRRGELLGLKWDDIDFDNCTIHVKRSLVRVYDHNLKKTTLLLQPPK 194 Query: 224 TQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSAR 283 T+AG RVI P D + ++ L L +EH ++ K + QP ++ Sbjct: 195 TKAGY-RVI----PIPDFVVAE--LKELYEEH------------QRIKLS---QPNFNSL 232 Query: 284 ----VKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQM 339 V G + + + +K+A L + + + RHT A L +P + + Sbjct: 233 NLMFVTTQGTPIDPRNFERKFKQLLKKANLPNIRLHDLRHTVATLLLQQNVHPKIVQEIL 292 Query: 340 GHADAQMVFQVYG 352 GH D +Y Sbjct: 293 GHRDISTTLDIYS 305 >UniRef50_C2Z776 Prophage LambdaBa04, site-specific recombinase, phage integrase n=10 Tax=Bacillus cereus group RepID=C2Z776_BACCE Length = 379 Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 71/333 (21%), Positives = 135/333 (40%), Gaps = 32/333 (9%) Query: 36 QDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKE 94 + L++ ++ K +++ E+ TS +++K IL G K + S ++ Sbjct: 61 KQLSVLDIWGKLKPIRKAELKITSYEKDMSLVKLYILPTFGYKKIKS---------IKPV 111 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRT 154 ++ Y + + G S T++N +F+ V+ L DN + +E + Sbjct: 112 IIQSYYAE-----LKEKGLSNGTISNIHRCFRCIFKHAVEWEILHDNIMNKVKKPREEQG 166 Query: 155 IPDPLSREEFIRLIDACRNQQAKN--LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 S +E R + + + K + +++YTG+R GEL AL W+DID N +++ + Sbjct: 167 EMKTWSSKECNRFLHYLKEKNKKYYIFFLLAIYTGMRRGELLALTWKDIDFDNKRILVNK 226 Query: 213 NLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKC 272 +L K + K T S +T L + Y + E + Sbjct: 227 SLVKTEEGLFKAATKTKSS------NRSISISSFVVTELQS-------YYAYKKKEFFRW 273 Query: 273 TFVFQPEVSARVKN-YGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGAN 331 E N +D+ + K+AG+ + + RHT+A L AG + Sbjct: 274 GIHLNEEAYIFAGNTIHSPLHIDAPHRFLKDHYKKAGVPRIRIHDLRHTHATLMLQAGEH 333 Query: 332 PAFIANQMGHADAQMVFQVYGKWMSENNNAQVA 364 P + +++GH+ QM Y +++N Q A Sbjct: 334 PKIVQDRLGHSSIQMTLDKYSH-ITQNMQQQAA 365 >UniRef50_C0CSR1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CSR1_9CLOT Length = 354 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 76/310 (24%), Positives = 129/310 (41%), Gaps = 45/310 (14%) Query: 46 KFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKE-LLTGYQIPKS 104 + +K+ +++K +L +Y + +K ++ I K+L +++ E + LT Y+ + Sbjct: 73 QLFMIKKRDLSKETLTSYLSAVKRLMVEINGKSL------DQMDETDIDWYLTQYE--QR 124 Query: 105 NYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEF 164 N A TVNN L+A + + +ADNP + I K R D S EE Sbjct: 125 NVSSGGKKNEASTVNNERRFLSAFYTWMRKAKLIADNPVESIPAKKVPRKPIDYYSAEEI 184 Query: 165 IRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKT 224 R+ DAC+N + + + V TG R GE+ + + +DL+ G +MI+ Sbjct: 185 ARIRDACKNPRERAIVEVFRSTGARVGEIAEITLDQLDLETGDIMIQ-----------GE 233 Query: 225 QAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARV 284 + G R I+L A ++R Y T K ++ P Sbjct: 234 KGGRYRTIYLDDDA-------------------RYYYRMYLATRKDDSPYLL-PHSR--- 270 Query: 285 KNYGDHFTVDSIRQMWDAAIKRAGLRHR-KSYQSRHTYACWSLTAGANPAFIANQMGHAD 343 K YG + D+ R + +RAGL R ++ R T G + I +GHA+ Sbjct: 271 KPYG-KMSTDAYRSVMKTIGRRAGLMCRVYPHKMRKTLGMNLKNRGVDLGIIQEVLGHAN 329 Query: 344 AQMVFQVYGK 353 + Q Y + Sbjct: 330 PAVTSQYYAQ 339 >UniRef50_B1HMD1 Putative uncharacterized protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HMD1_LYSSC Length = 632 Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 72/277 (25%), Positives = 112/277 (40%), Gaps = 72/277 (25%) Query: 85 KEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFK 144 +E L + E + Y IP Q G A T+ +T L++ + F VD GY+ +P K Sbjct: 390 RENCLSLTPEEIRKYFIP------LQKGLKAATIKKQLTILSSFYNFCVDEGYIHMSPIK 443 Query: 145 GISPLKESRTIPDPLSREEFIRLIDAC-RNQQAKNLWCVSVY--TGVRPGELCALGWEDI 201 ++S++IP L +EE ++ C + Q +N V + +G R E+ L DI Sbjct: 444 KRWFPRKSKSIPKFLEKEEIAKVRQLCEKRNQLRNRVMVELLLTSGCRISEVNMLNKSDI 503 Query: 202 DLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHF 261 DL+N T + L K + I +VHF Sbjct: 504 DLENRTAQV---LGKGK------------------------------------KIREVHF 524 Query: 262 REYGRTEKQKCTFVFQPEVSARVKNYGDHFTVD-----SIRQMW--------DAAIKRAG 308 E C + + + + + + F + IRQM DA IK + Sbjct: 525 SE-------TCAILLERLLESYIDEHPALFISERGTRLGIRQMQKIVEQVGIDAKIKSSL 577 Query: 309 LRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQ 345 HR RHT+A LT GA+ +FIA+++GH Q Sbjct: 578 HPHR----FRHTFATELLTKGADLSFIADELGHKQLQ 610 >UniRef50_D1C8V1 Integrase family protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8V1_SPHTD Length = 376 Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 75/322 (23%), Positives = 132/322 (40%), Gaps = 44/322 (13%) Query: 39 TIKELAEKFLALKETEVAKTSL-----NTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 T+K+ E++L +VA+ SL +YR +I ++L ++ + +L + Sbjct: 68 TVKDYLERWL----EDVARPSLRPRTYESYRGIIT--------RHLTPALGRTRLARLSP 115 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 + + Y K G S TV + L + G ++ N +P K+ R Sbjct: 116 DQVQRYINQKQA-----AGLSPRTVTYHRAVLRKALNDAMRWGLVSRNAAALAAPPKQDR 170 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 L+ EE +D + + L+ V++ G+R GE L W+D+DL+ GT+ +R Sbjct: 171 PPARFLTPEEARHFLDTVAGHRLEALFTVALAVGLRQGEALGLRWDDVDLEAGTLTVRYA 230 Query: 214 LAKDRFTV----PKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 L + + PKTQ + R + L A+ ALR TR +E I ++ + G Sbjct: 231 LQRSGGALVLVEPKTQR-SRRTVALPAVALRALREHR--TRQLEERIAAPYWDDQG---- 283 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG 329 FVF + G ++ + + AGL + + RH A + G Sbjct: 284 ----FVFTSTI-------GTAIDARNLTREFHRLRAEAGLPWLRFHDLRHGCASLLMAQG 332 Query: 330 ANPAFIANQMGHADAQMVFQVY 351 NP + +GH+ + Y Sbjct: 333 VNPRVVMEILGHSQITLTLGTY 354 >UniRef50_B0KAT2 Phage integrase family protein n=7 Tax=Clostridia RepID=B0KAT2_THEP3 Length = 373 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 88/358 (24%), Positives = 146/358 (40%), Gaps = 53/358 (14%) Query: 41 KELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQ 100 K LAE +++ E + S T + I L I GE A K L K L+ Y Sbjct: 42 KALAEIIAKIEKNEFIEPSKITLQQFINEWLKIYGEPKWAP-----KTLVSNKSLIDNYI 96 Query: 101 IPKSNYIVTQPGR----------------SAVTVNNYMTNLNAVFQFGVDNGYLADNPFK 144 IP +I Q + S T+N LN V +F V Y+A NP + Sbjct: 97 IPNLGHIELQKLKPVEIQKFYNSLKEKQLSNTTINYVHRLLNQVLKFAVKWQYIAKNPCE 156 Query: 145 GISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW---------CVSVYTGVRPGELCA 195 + K+ + +EF+ + ++AK ++ +++YTG+R GE+C Sbjct: 157 LVEAPKKDK--------KEFVTW-NFEHVKKAKKIFKDTPIYIHVMIALYTGLRLGEICG 207 Query: 196 LGWEDIDLKNGTMMIRRNLAK--DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSK 253 L WEDID KN T+ +RR + RF + + T++ I I + + Q +L Sbjct: 208 LRWEDIDFKNQTITVRRTAQRIDGRFIFKEPKTETSKGIISIPDFLVQILKQEKNKQLQN 267 Query: 254 EHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRK 313 + I F E TE + V++ R K D+ T ++ K++ + + Sbjct: 268 KLI----FGEKYITEYEGFISVWE---DGRFKE-PDYVT----KKFRKILKKQSDIPVIR 315 Query: 314 SYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + RHT+A L +G + I+ ++ H Y E + + L + LS Sbjct: 316 FHDLRHTHATLMLRSGVDLKIISKRLRHGRISTTADFYSHVDLEMDREALRKLESNLS 373 >UniRef50_C5SDU6 Integrase family protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDU6_CHRVI Length = 361 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 78/347 (22%), Positives = 144/347 (41%), Gaps = 48/347 (13%) Query: 5 SSVCYAIKTGVFDYAKQFPSSRNLEKFG--EARQDLTIKELAEKFLALKETEVAKTSLNT 62 +S + +T +A++F ++ ++ G Q T+K+ +++ + T+ T Sbjct: 28 TSRTFKTRTAAERWARKFEAAALEDRAGLIMEGQKHTLKDAIKRYRTEILPDHTATTRPT 87 Query: 63 YRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 Y + + +G L S + K+ R ELLT ++ TV+ Y+ Sbjct: 88 YAQRLDYWCAELGHLRL-SDVTPAKIAGCRDELLTS--------------KAPATVHGYL 132 Query: 123 TNLNAVFQFGVDN-GYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW- 180 L +V V ++ ++P + + LS++E RL++ACR ++ +L+ Sbjct: 133 AVLASVLTTCVKRWHWVKESPMAHVDKPSVANGRTRFLSQDELSRLLEACRASESPDLYL 192 Query: 181 --CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPA 238 +++ TG R GEL L W D+DL + +R D T K R+ +KP Sbjct: 193 AVVLAITTGARRGELLGLRWRDVDLVKDVLYLR----VDNETTTKGGVRAVRIASQVKPI 248 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 ++A ++ +R + VF VS R VD +R Sbjct: 249 LEARQAG---------------YRRGKVADITGAALVFPSRVSTRQP-------VD-LRT 285 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQ 345 + A++RAG+ + + RH+ A + GA+ I +GH AQ Sbjct: 286 PFRTALRRAGIEGFRWHDLRHSAASFMAAHGASLVEIGAVLGHRSAQ 332 >UniRef50_C7WHB1 Putative uncharacterized protein n=1 Tax=Enterococcus faecalis DS5 RepID=C7WHB1_ENTFA Length = 389 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/310 (23%), Positives = 133/310 (42%), Gaps = 42/310 (13%) Query: 66 VIKNILSIIGEKNLASSINKE----KLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 I+ II ++ L S NK+ K +++ ++ + K N +++ T Y Sbjct: 89 TIREYSDIIDKRFLPSFKNKKIREIKPFQIKDIVIAAQPLSKKNTTLSRK-----TKKRY 143 Query: 122 MTNLNAVFQFGVDN-GYLADNPFKGISPLKES---RTIPDPLSREEFIRLIDACR---NQ 174 + L++VF D + NP + KES + P+P S EE ++DA N Sbjct: 144 LNALSSVFNVARDQYRIITHNPVSDVRLPKESVKKKGTPEPYSIEEVKLMLDALEEHANL 203 Query: 175 QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAG----TNR 230 + K L + TG R GE+ A+ D D T+ + + D + + G ++ Sbjct: 204 KTKALVMTAFITGAREGEIAAVEESDFDFSAMTVQFHQRIVLDENKKYQQRDGLKASDSK 263 Query: 231 VIHLIKPAIDALRSQMTLTRLSKEHI-IDVHFREYGRTEKQKCTFVF-QPEVSARVKNYG 288 I + + ++ +++ M++ + +++ + ID K +VF PE G Sbjct: 264 TIPVPRSYLELMKTFMSINQKARKELRID-----------PKHKYVFGAPE--------G 304 Query: 289 DHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQ-MGHADAQMV 347 + S+ + W+ IKRAGLR + + RHT A + L P + +GH D + Sbjct: 305 NFELPTSLYRNWNRFIKRAGLRQIRFHDLRHTSASFLLADPTIPIKTVQELLGHKDYRTT 364 Query: 348 FQVYGKWMSE 357 +YG + E Sbjct: 365 MNIYGHALEE 374 >UniRef50_Q1CQ02 DNA integration/recombination/inversion protein n=7 Tax=root RepID=Q1CQ02_STRPD Length = 385 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 67/249 (26%), Positives = 115/249 (46%), Gaps = 54/249 (21%) Query: 121 YMTNLNAVFQFGVDNGYLADNP----------FKGISPLKESRTIPDPLSREEFIRLIDA 170 Y++ N +F+F V+ G + +NP +K + L + + L+ F+RL++A Sbjct: 152 YLSLANRIFKFAVNLGIIDNNPMNKTLRSKCTYKNVDTLTKKYYTKEELN--TFLRLVEA 209 Query: 171 CRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA--KDRFTV--PKTQA 226 + + ++ + Y G R GEL AL D D +N T+ I + +A K+ + V PKT+ Sbjct: 210 EETLEMRLIYRLLSYGGFRIGELIALKDTDFDFRNNTISITKTIAYTKEGWAVQSPKTKK 269 Query: 227 GTNRVIHLIKPAIDALRSQMTLTRLS-KEHIIDVH--FREYGRTEKQKCTFVFQPEVSAR 283 +NR I ++DA M+L +L K+ I +H F+ + Sbjct: 270 -SNRTI-----SMDA--ETMSLAKLYIKQSIKPLHGSFKLF------------------- 302 Query: 284 VKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQ-MGHA 342 +F D++R+ D I + GL+ + RHT+A AG PA IA + +GHA Sbjct: 303 ------NFASDTVRKRLDRFILKHGLKRITPHGFRHTHASLLFEAGI-PAKIAQERLGHA 355 Query: 343 DAQMVFQVY 351 + +Y Sbjct: 356 KIAITMDLY 364 >UniRef50_C4XJH7 Putative site-specific recombinase n=3 Tax=Desulfovibrio magneticus RS-1 RepID=C4XJH7_DESMR Length = 374 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 88/347 (25%), Positives = 144/347 (41%), Gaps = 64/347 (18%) Query: 29 EKFGEARQDLTIKELAEKFLA-LKETEVAKTSLNTYRAVIKNILS-IIGEKNLASSINKE 86 EK ++ Q +T +ELA K+LA LK + + + +I N + IIG++ +N Sbjct: 79 EKTIQSGQGMTFRELAGKYLAHLKVSGRTENNTKKLAKMIDNQFNPIIGDR----VVNSM 134 Query: 87 KLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGI 146 ++ + +Q ++N +P RS TVN Y +NA+F FGV G NP KG Sbjct: 135 TYIDDMVPFIQFFQ--ETNGKQNRP-RSQPTVNRYGDYVNAIFNFGVTTGLTTVNPMKG- 190 Query: 147 SPLKESRTIPDP--LSREEFIRLIDACRNQQAKNLWCVSV--YTGVRPG--ELCALGWED 200 K+SR P L+ ++ R++D + + W + V G RPG EL AL W+ Sbjct: 191 --RKKSREKPRDVQLTVDDVKRIMD---HAEPHVRWAMEVCFSLGTRPGESELLALKWDH 245 Query: 201 IDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVH 260 ID G + K A R ++ P L +M + + + Sbjct: 246 IDFDKG--------------IAKIYASKTRTYRVV-PISPTLLGKMKEVKTESQSGYVIE 290 Query: 261 FREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHR-KSYQSRH 319 +R QP + IR+ + A +RAG+ + + Y RH Sbjct: 291 WRG-------------QP--------------IGMIRKGFRRACERAGITYPVRMYDLRH 323 Query: 320 TYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALL 366 +A L+ GA+ A ++ +GH+ Y + V+LL Sbjct: 324 LFATTMLSKGADLAAVSKLLGHSMISTTTSHYYHCLEGEKERAVSLL 370 >UniRef50_C5UVC6 Site-specific recombinase, phage integrase family n=2 Tax=Clostridium RepID=C5UVC6_CLOBO Length = 385 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/359 (20%), Positives = 141/359 (39%), Gaps = 29/359 (8%) Query: 18 YAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEK 77 +A Q +N DL K K+ + T + K S+NT + I Sbjct: 43 FATQILDKKNHGFVSPTDSDLLFKNFIMKWYDMHTTSL-KLSVNTRNDYLSRI-----NT 96 Query: 78 NLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGY 137 NL + K+ ++ +++ + N ++ + TV Y+ L++ ++ Sbjct: 97 NLIPLLGNYKIKDISIDVVQNFY----NTLINEKHLKPTTVKKYLDILSSCLKYAQSKDL 152 Query: 138 LADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALG 197 + P I +K + + ++EE ++ +N + + TG+R GELC L Sbjct: 153 IYKLPTSYIKKVKIQKPKIEYWNQEEVNFFLNYIKNTYLYTPIFIDILTGLRIGELCGLR 212 Query: 198 WEDIDLKNGTMMIRRNLAKDR-----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLS 252 W D+DL+NG + + L D+ + ++R I + K ID L+ ++ R + Sbjct: 213 WCDVDLQNGIITVNHQLIHDKRLKVLLLADLKTSSSHRSITIPKILIDYLK-ELKANRQA 271 Query: 253 KEHIIDVHFREYGRTEKQKCTFV---FQPEVSARVKNYGDHFTVDSIRQMWDAAIK-RAG 308 EY ++Q ++ + +V Y ++D ++ + Sbjct: 272 TN-------TEYVVLDRQDFKYIPRSLSMNFTKKVAKYKK--SIDDFKKANEEVPHGYMQ 322 Query: 309 LRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLN 367 L+ + RHT+A + G N ++ ++GH D +M Y + N LLN Sbjct: 323 LKQISFHGLRHTHATLLIANGENVKVVSERLGHTDIRMTLNTYTHVLDSMKNNTANLLN 381 >UniRef50_C8X726 Integrase family protein n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X726_NAKMY Length = 371 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/245 (23%), Positives = 99/245 (40%), Gaps = 25/245 (10%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC 171 G+ TV L A + + N K + + + T +PLS E RL+ A Sbjct: 129 GKGKRTVQYVHATLRAALEHAYREELVTRNVAKMVRVERPTPTPKEPLSVAEARRLLTAT 188 Query: 172 RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL----AKDRFTVPKTQAG 227 R+ + LW V + G+R E+C L W+++DL+N T+ + ++ K R KT+ Sbjct: 189 RDDEDHALWVVMLLLGLRRSEVCGLRWDNVDLENRTLSVTHSVQRVDGKLRELPTKTRRS 248 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 T V + A+ Q +T + + E +VF ++ Sbjct: 249 TRTV------PLPAMVHQALVTHRAAMMPTSQYLPE--------PVYVFGTKI------- 287 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 G ++ + W +R G+R + RH+ L G +P + +GH+ +M Sbjct: 288 GTPMEPRNLTRRWVTLAERQGIRRVPLHALRHSCVSLLLAQGVHPRTVMEIVGHSAIEMT 347 Query: 348 FQVYG 352 VYG Sbjct: 348 MNVYG 352 >UniRef50_C0QHJ7 Phage integrase family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QHJ7_DESAH Length = 360 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/254 (23%), Positives = 100/254 (39%), Gaps = 31/254 (12%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDP------LSREEFI 165 G + T+ + +L +F V GY NP K D L+ ++ Sbjct: 119 GMNLSTLRKILVSLRQIFNLAVKRGYCPRNPLDYADMPKSQGEETDGADKIQILTHDQIT 178 Query: 166 RLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQ 225 ++ Q+ L+ +++++G R GEL L W DI + + I+R+ RF KT+ Sbjct: 179 AFLEVVTEQKYHVLFSLAIFSGARQGELLGLKWSDILWGDSQIHIQRSFNNQRFYDTKTK 238 Query: 226 AGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVK 285 G+NR I I P + L +L K + VF P Sbjct: 239 -GSNRKID-IGPVM--------LKKLKKWRLA---------CPPGGLDLVF-PTAKGNPM 278 Query: 286 NYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQ 345 N+ + + + + +K A L + + RHTYA + G N +I Q+GH++ Sbjct: 279 NHN-----NMVNRYFLPGLKAAKLERIRFHDMRHTYASLLIDQGENIKYIQAQLGHSNPT 333 Query: 346 MVFQVYGKWMSENN 359 + VY M N Sbjct: 334 VTLNVYAHLMKGTN 347 >UniRef50_B2UXR9 Phage integrase n=3 Tax=Clostridium RepID=B2UXR9_CLOBA Length = 389 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 36/233 (15%) Query: 150 KESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMM 209 KES IP L EE I A + + + L+ ++ +G+R GEL AL W DI+LK + Sbjct: 170 KESSVIPFTL--EEQKEFIKAIKGNKFEALFITALNSGLREGELLALTWNDINLKEKYIN 227 Query: 210 IRRNL-------------AKDRFTVPKTQAGTNRVI--HLIKPAIDALRSQMTLTRLSKE 254 + +NL +K PKT+ G +V + + + + Q + RL Sbjct: 228 VNKNLGVVTEVSKDGRGVSKLEVQTPKTRKGKRQVSIPNFLITVLKEYKKQQSKNRLKLA 287 Query: 255 HIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKS 314 + +Y +F E YG++ D + + +K + ++ RK Sbjct: 288 N-------KYTNN-----NLIFCDE-------YGNYLNRDKVTYQYKKLLKESKIKTRKF 328 Query: 315 YQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLN 367 + RHTYA G + +GH+D + Y + + V+ L+ Sbjct: 329 HDLRHTYATRLFELGEQARTVQELLGHSDVSVTLNTYTHVLDDMKEKAVSKLD 381 >UniRef50_B1I9D1 Site-specific recombinase, phage integrase family n=15 Tax=Streptococcus RepID=B1I9D1_STRPI Length = 377 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 26/246 (10%) Query: 114 SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRN 173 S T+N M L +F G+ GY NP I L +T + +EF + Sbjct: 133 STNTINKIMILLKKIFDVGLRKGYYTSNPANLIKKLPIEKTKMQFWTVKEFQHFLTLFET 192 Query: 174 QQ--AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAG 227 ++ K L+ V +TG+R GE AL W+DID + T+ I +++ ++ + KT+AG Sbjct: 193 EEYNIKLLFTVLFFTGLRLGEALALTWQDIDFTSNTIHITKSVYVNKGISHVSTTKTKAG 252 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 T R+I L ++ + ++H+++ T VFQ KN Sbjct: 253 TRRII-----INKKLSHELQQWQQKQKHLLE------QFTSDSMTLQVFQGSPITITKN- 300 Query: 288 GDHFTVDSIRQMWDAAIKR-AGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 ++ + ++R + L+ + + RH++A + G + + ++GHA Sbjct: 301 -------AVENQYKKILERDSTLKKIRIHDFRHSHASLLINQGEDYLVVKERLGHASITT 353 Query: 347 VFQVYG 352 Y Sbjct: 354 TIDTYS 359 >UniRef50_B6KBF3 Putative uncharacterized protein n=3 Tax=Toxoplasma gondii RepID=B6KBF3_TOXGO Length = 961 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 21/191 (10%) Query: 39 TIKELAEK-FLALKETEVAKTSLNTYRAVIKNILSIIGEKNLA--SSINKEKLLEVRKEL 95 T++ EK FL ++E EV + + R K+IL ++G+ ++ S ++ E+ L++ K Sbjct: 648 TLRVFIEKHFLPIREQEVGEHTRRVERGFWKSILEVLGDVAVSELSGVHWERYLKILK-- 705 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLA-DNPFKGISPLKESRT 154 K N S T + A ++GV G L+ + F+ I + Sbjct: 706 -------KRNC-------SPRTQALHQVAYQAALRYGVHTGRLSRSHDFRRIRGCTKRTM 751 Query: 155 IPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR-RN 213 +PL E RL+DA + ++++ V + G+RP EL L WEDID KN IR Sbjct: 752 QSEPLRATEVPRLLDAAGSAMHRSMFAVGIGIGLRPSELLRLHWEDIDWKNNIASIRGSK 811 Query: 214 LAKDRFTVPKT 224 A R VP T Sbjct: 812 TAASRAAVPLT 822 >UniRef50_C8PFF6 Putative phage integrase n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PFF6_9PROT Length = 290 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/258 (23%), Positives = 115/258 (44%), Gaps = 33/258 (12%) Query: 110 QPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLID 169 + G + T+ + + V+ G LA NPF K R+ DP S EE + L+ Sbjct: 55 EEGLAPSTIKRVVLCWRRACEQAVEAGKLAKNPFLRAKYPKIPRSKTDPFSVEE-VDLML 113 Query: 170 ACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTN 229 + + + ++ + YTG R E+ AL W+DID + ++ I ++L D P+T+ G + Sbjct: 114 SKASGRLESFLAFAFYTGARCCEILALCWDDIDTEAMSISISKSLT-DGLVKPRTKTGED 172 Query: 230 RVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGD 289 R++ + P + + +Q+ R S E+ + KQ F +G+ Sbjct: 173 RIVPIFAPLLPYI-AQLEKHRDS----------EWVFSRKQDHLF-------GSTALFGN 214 Query: 290 HFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL---TAGANP-AFIANQMGHADAQ 345 W + G+ +R + +RHT+A + G P +++ +GHA Sbjct: 215 --------GRWRKFLAECGIPYRSARHTRHTFATHMVERAVKGEIPLKWVSQILGHASLD 266 Query: 346 MVFQVYGKWMSENNNAQV 363 M +VY +++ +N + ++ Sbjct: 267 MTIKVYARFL-QNEHMKI 283 >UniRef50_Q2IFG9 Phage integrase n=2 Tax=Cystobacterineae RepID=Q2IFG9_ANADE Length = 275 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 34/237 (14%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNP-FKGISPLKESRTIPDPLSREEFIRLIDA 170 G+S ++NN++ L + V+ + P KG E T L+ +E RL+ A Sbjct: 34 GQSKKSINNHLAALRKLLNLAVEWEVIPRAPKVKGFRAKTEYITEEQFLTFDEAERLVHA 93 Query: 171 CRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNR 230 + + ++ TG+R GEL AL WED+DL G +++RR L + PK G NR Sbjct: 94 A-APEWRTFIITALKTGLRVGELLALKWEDLDLVAGQLVVRRTLWHKQEGPPK--GGRNR 150 Query: 231 VIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDH 290 + L AI L++ L K T+VF + G Sbjct: 151 KVPLSDEAIAVLKAHRHL----------------------KGTYVF-------CEADGRR 181 Query: 291 FTVDSIRQMWDAAIKRAGLRHR-KSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 T ++ + + +RA L R ++ RHT+A + G + + +GH +M Sbjct: 182 LTHSRVKDVVPSTCRRAQLAKRLTTHGLRHTFASHLVMRGVSLMAVKELLGHESIEM 238 >UniRef50_B3E8B2 Integrase family protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E8B2_GEOLS Length = 421 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/284 (23%), Positives = 115/284 (40%), Gaps = 73/284 (25%) Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK-ESRTIPDPLSREEFIRLIDACRNQQ 175 T N +T + A V+ +L +P + PLK +S LS +E RL+ A +++ Sbjct: 173 TCNRDLTAIKAFLSKAVEWEHLEHHPLAKVKPLKVDSVAKVRFLSADEEKRLLKALDDRE 232 Query: 176 --------AKNLW-------------------------CVSVYTGVRPGELCALGWEDID 202 NLW VS+ TG+R GEL +L W+ +D Sbjct: 233 EVARAERATANLWRKERGYPLYTDLNSVSFADHLKPMILVSLNTGIRWGELASLAWDSVD 292 Query: 203 LKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFR 262 +K + + + AK +G R + L A++AL+ K+ DV F Sbjct: 293 MKKALVTVIGDKAK---------SGKTRHVPLNSIALNALKD------WKKQSSGDVVF- 336 Query: 263 EYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYA 322 GR K+ T+D++ + W A + A +++ + + RH +A Sbjct: 337 -PGRDGKK---------------------TLDNVNKSWKAVLDAAQIKNFRWHDMRHHFA 374 Query: 323 CWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALL 366 W + AG + + +GH+D +M + Y E+ A V LL Sbjct: 375 SWLVMAGVDLNTVRELLGHSDLKMTLR-YAHLAPEHKAAAVGLL 417 >UniRef50_B7DTQ3 Integrase family protein n=2 Tax=Bacillales RepID=B7DTQ3_9BACL Length = 392 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 80/353 (22%), Positives = 149/353 (42%), Gaps = 46/353 (13%) Query: 16 FDYAKQFPSSRNLEKF----GEARQDLTIKELAEK--------FLALKETEVAKTSLNTY 63 + + F + R+ E+F E D T E ++K +L K T+V +L +Y Sbjct: 38 YKWHGGFKTKRDAERFLATLVEQVHDGTYVEPSKKTVGAYLREWLDDKRTKVRPGTLRSY 97 Query: 64 RAVIKN-ILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 ++++ I+ IG+ LA + + ++ +L TG +I S +V + Sbjct: 98 VWLVEHHIIPRIGQLELAK-LRPSHIQKLYTDLQTG-----DEHI------SKRSVLHAH 145 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCV 182 L+ V G + N + P + +R + E+ + A R + + + Sbjct: 146 RILHQALDRAVKWGLITRNVTDAVEPPRPARQEMRVWTDEQLDAFLQAARKSRYYVAFVL 205 Query: 183 SVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD----RFTVPKTQAGTNRVIHLIKPA 238 TG+R GE+ AL WED+DL+ G + + R+ + R PKT++G R I L Sbjct: 206 LSSTGMRVGEVLALRWEDVDLQAGLVRVVRSYSYTGKGYRIEEPKTESG-RRSIALPPAV 264 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 +D LR T + ++ ++ + + + CT +G ++R Sbjct: 265 VDLLRKHKT-EQAARRLMVGSAWED---NDLVICT------------AFGKPILQHNLRT 308 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 + I+R GL + + RHT+A L G +P + ++GH+D + Y Sbjct: 309 SFHRIIERTGLPRIRLHDLRHTHATILLQRGVHPKVVQERLGHSDITLTLNTY 361 >UniRef50_Q38Y39 Site-specific recombinase, prophage lsa1 integrase n=3 Tax=Lactobacillus RepID=Q38Y39_LACSS Length = 385 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/247 (26%), Positives = 107/247 (43%), Gaps = 43/247 (17%) Query: 126 NAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREE------------FIRLIDACRN 173 +A+F++ + GY+ DNP + T+P L +E+ F ID + Sbjct: 140 SAIFKYAILQGYIKDNPCTRV-------TMPKKLDKEDTLNFWDKDQLKTFFNGIDPVND 192 Query: 174 QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA---KDRFTV--PKTQAGT 228 + L+ V +TG+R GE +L W+D++++ T+ I + L K R + KT+ GT Sbjct: 193 LEKYTLFRVLAFTGIRRGECLSLTWDDLNVQKATLDINKTLTHGDKGRLLIQPTKTKKGT 252 Query: 229 NRVIHLIKPAIDALRSQMTLTRLSKEHIIDVH-FREYGRTEKQKCTFVFQPEVSARVKNY 287 RVI L + TL L K H+ + G + +F A KN Sbjct: 253 -RVISL---------DESTLLYLKKWHLEQRRMYLMLGYNINKSNQLIF-----ATSKNT 297 Query: 288 GDHFTVDS--IRQMWDAAIKR-AGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADA 344 S +R + D A K A L + RH++A +AGA+ + ++GH DA Sbjct: 298 FKSLNTPSKWLRALIDDANKSGANLPSITVHGFRHSHASALFSAGASIKEVQERLGHEDA 357 Query: 345 QMVFQVY 351 Q +Y Sbjct: 358 QTTLNIY 364 >UniRef50_D0DRR6 Site-specific recombinase n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DRR6_LACFE Length = 394 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 40/242 (16%) Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKN---- 178 T L +F+ + + +NP K + +K S+ + ++++F ++ID + Sbjct: 158 TMLGKIFERAILMSLMRENPAKIVGNVKRSQDEVEFWTKDQFQKVIDQTSKDTYTHRFDF 217 Query: 179 --LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL---AKDRFTVPKTQ-AGTNRVI 232 LW + + TG+R GE AL W+D+DLK GT+ I ++L + + + + KT+ + RVI Sbjct: 218 IILWFLFM-TGMRSGEAKALTWKDVDLKAGTIDINKSLLYKSVNNYKLGKTKNRQSMRVI 276 Query: 233 HLIKPAIDALRSQMTLTRL--SKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDH 290 + ID L RL E ++ Q + ++ V +YGD Sbjct: 277 SIDPQTIDYLEEWYEDQRLMTRSEFVLS-----------QDGAPLNSTYINDIVHDYGDL 325 Query: 291 FTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQV 350 V ++ ++ RH++A ++ G NP I +++GH D + ++ Sbjct: 326 AKVPTV----------------TAHALRHSHASLLISLGENPLVIRDRLGHKDVRTTLEI 369 Query: 351 YG 352 YG Sbjct: 370 YG 371 >UniRef50_C6J9M1 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9M1_9FIRM Length = 226 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 27/230 (11%) Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR- 212 +I + ++ F+ I + L+ + T +R GE+C L W+D+DL++G + I Sbjct: 3 SISTMVQQDNFLTYIKNSKYAYYYPLFVFILETALRVGEVCGLTWDDVDLEHGFVNITHQ 62 Query: 213 ----NLAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQM-TLTRLSKEHIIDVH-FR 262 N+ KD + PK+++G R + L A DAL QM + K+ I++ ++ Sbjct: 63 LQYNNVGKDACQYQILTPKSKSGV-RNVPLSNAARDALMEQMKNQIEMDKKTEIEIDGYK 121 Query: 263 EYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAG-----LRHRKSYQS 317 ++ + +Q F+ Q R+ N I +++ IK+ G L H + Sbjct: 122 DFVFSNRQNKPFITQ--TIGRILN--------RIVDDYNSDIKKFGGTIEPLPHIHPHLL 171 Query: 318 RHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLN 367 RHT AG +P + + MGHA +M ++Y E ++ LN Sbjct: 172 RHTSCSRMAEAGVDPRTLQDIMGHASMKMTMELYNHVTDERLTNEIQKLN 221 >UniRef50_C4XTU2 Putative site-specific recombinase n=5 Tax=Desulfovibrio magneticus RS-1 RepID=C4XTU2_DESMR Length = 411 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 112/260 (43%), Gaps = 53/260 (20%) Query: 113 RSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES-RTIPDPLSREEFIRLIDAC 171 RS +VN Y ++A+F FG++ ++ +P KG KE R + + ++ R++D Sbjct: 193 RSQASVNRYCDYVDAIFNFGMEMELISKSPMKGRKKAKEQPRDVQ--IGIDDLKRIMD-- 248 Query: 172 RNQQAKNLWCVSVY--TGVRPG--ELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAG 227 + ++ W + V G RPG EL AL WE +D GT+ I K TVP T++ Sbjct: 249 -HAESHIRWAMEVCFNLGTRPGPSELFALRWEHVDFDAGTVRIYATKTKTFRTVPVTES- 306 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 L RL RE ++ + F+ + E Sbjct: 307 -------------------FLIRL----------REM--RDQSQSGFIVEYE-------- 327 Query: 288 GDHFTVDSIRQMWDAAIKRAGLR-HRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 G T +IR+ ++ A ++AG+ + Y RH +A L GA+ A ++ MGH+ +M Sbjct: 328 GKPLT--TIRRSFNTACEKAGITVDVRMYDLRHLFATTMLANGADLAAVSKLMGHSTVKM 385 Query: 347 VFQVYGKWMSENNNAQVALL 366 VY ++ V L Sbjct: 386 TADVYYHYLEGEKEKAVGKL 405 >UniRef50_D0IYY1 Phage integrase n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IYY1_COMTE Length = 175 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 84/186 (45%), Gaps = 23/186 (12%) Query: 166 RLIDACRNQQAK---NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVP 222 ++ID R A NL ++G+R E+ AL W+ ID ++ + + K Sbjct: 3 KIIDHARANFAPTVANLIAFRFFSGLRTSEMVALRWQSIDCNKMQVLTHKAVVKGL---- 58 Query: 223 KTQAGTN--RVIHLIKPAIDALRSQMTLT-RLSKEHIIDVHFREYGRTEKQKCTFVFQP- 278 + QA TN R++ L A+DAL Q T R ++ R+ T K T +P Sbjct: 59 RKQAKTNKARLVSLNSRALDALERQKEQTPRAQLGNVAGDVMRQT--TPKDSQTVFVKPM 116 Query: 279 --EVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIA 336 E A K + + F W +K G+R+R RHTYA L AGA PA+ A Sbjct: 117 HGEPWADEKRFHNPF--------WVPVLKALGIRYRLPNHMRHTYATMLLMAGATPAYAA 168 Query: 337 NQMGHA 342 QMGH+ Sbjct: 169 KQMGHS 174 >UniRef50_C6JIX5 Phage integrase n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JIX5_FUSVA Length = 357 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 41/260 (15%) Query: 125 LNAVFQFGVDNGYLADNPFK--GISPL---KESRTIPDPLSREEFIRLIDACRNQQAKNL 179 LNA F + + L NP K G + L K+ I +P E+FI + ++ Sbjct: 130 LNAFFNYAIKFHNLKSNPLKITGKAKLNKPKKEMEIWEPHEFEKFIGTF-LKEDYLHRSF 188 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN---LAKDRF-TVPKTQAGTNRVIHLI 235 + + Y G R GE+ AL +DID KN T+ + + KD PKT+ +NRV+ + Sbjct: 189 FSLLFYGGFRIGEVLALRLDDIDFKNSTIRVDETKTFVTKDAIINSPKTEK-SNRVVDM- 246 Query: 236 KPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDS 295 +++ + K+HI + YG + F++ S S Sbjct: 247 ---------PLSVMEILKKHIKTL----YGIENRD---FIYSRHQS-------------S 277 Query: 296 IRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 IR +K+AGL++ + + RH++ + G N IA+++GH + Y Sbjct: 278 IRNNLRRHLKKAGLKNIRIHDLRHSHVSMLIHMGVNVVDIADRVGHDNPTTTLNTYSHMY 337 Query: 356 SENNNAQVALLNTQLSEFAP 375 S N LL +++ P Sbjct: 338 SNNGKKIADLLENNITKVLP 357 >UniRef50_Q3ABG2 Prophage LambdaCh01, site-specific recombinase, phage integrase family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABG2_CARHZ Length = 371 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/236 (22%), Positives = 101/236 (42%), Gaps = 19/236 (8%) Query: 125 LNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSV 184 L+ F F + + +NP + K + L +E L++A ++ + +++ Sbjct: 136 LHKAFDFAMKLQLIPNNPIDFVDSPKAKKYKAKILDLKEIKTLLNALKDTDLEVPINLAL 195 Query: 185 YTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKP--AIDAL 242 G+R GEL AL WED++ + GT+ IRRNL + AGT ++ K +I L Sbjct: 196 SLGLRRGELLALKWEDVNWEEGTIQIRRNLVR---------AGTKLILKEPKSETSIRTL 246 Query: 243 RSQMTLTRLSKEH-IIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWD 301 + TL + K H + + E + F+ KN G+ + + Sbjct: 247 KLSKTLLTMLKNHRKKQIELKLMLGNEYKDTGFIC-------CKNNGEMINPSTFSHQFS 299 Query: 302 AAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 +K+ GL + + RHT A L + ++++GH+ + +Y +++ Sbjct: 300 DFLKKHGLPDIRLHDLRHTNATLMLKSNIPAKIASSRLGHSTVAITLDLYSHVLTD 355 >UniRef50_A7VVX9 Putative uncharacterized protein n=2 Tax=Clostridium leptum DSM 753 RepID=A7VVX9_9CLOT Length = 419 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 70/291 (24%), Positives = 118/291 (40%), Gaps = 66/291 (22%) Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNPFKGI----SPLKESRTIPDPLSREEFIRLIDACR 172 T+ Y + VFQ ++N + NP + + LK+ R LS EE +I+ Sbjct: 160 TLVEYRSVCRQVFQLAIENRIIDYNPASSVKIVSNQLKKERR---ALSVEEQGWIINTPH 216 Query: 173 NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD--RFTV---PKTQAG 227 Q + + ++ G+R GE+ L W DID + GT+ + +++ K+ RF + KT++G Sbjct: 217 RAQKAAM--IMMFAGLRRGEVIPLTWNDIDFEAGTIRVNKSVFKEGTRFNIKSGAKTESG 274 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 NRV+++ + ID L+ Q K T + P+ + Sbjct: 275 -NRVVNIPQILIDFLKLQ------------------------PKDTILVCPDTKDVM--- 306 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRH------RKSYQS---------------RHTYACWSL 326 T S R+MWD+ IK +++ R Y RHT+ Sbjct: 307 ---MTETSWRRMWDSYIKDLNIKYGDLNGKRSKYDPKGVPITIPRITPHWLRHTFCTLLY 363 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTM 377 +G + QMGH+D + +Y E+ V+ LN + A M Sbjct: 364 LSGTDVLTAKEQMGHSDIKTTLGIYTHLDKEHKRNAVSKLNEYIETHASHM 414 >UniRef50_C3WEM5 DNA integration/recombination/invertion protein n=2 Tax=Fusobacterium RepID=C3WEM5_FUSMR Length = 350 Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 58/248 (23%), Positives = 99/248 (39%), Gaps = 44/248 (17%) Query: 125 LNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKN-----L 179 LN +F++ N +++ N K I K+ + I + ++ I ++ N + + + Sbjct: 142 LNMIFEYAFKNDFISTNKVKFIELGKKEKVIERKIFTQKEIEILWENLNSKTYHGKYTYI 201 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAI 239 + +YTG+R GEL L EDIDL+N T+ +R V KT AG R I + Sbjct: 202 ILILIYTGMRIGELFNLKTEDIDLENRTIKVR---------VSKTSAGV-RTIPIFSKIF 251 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 + + + II + G T Q F+P Sbjct: 252 NLFKDNL---------IIGQEYFVKGDTTTQLSYATFKPR-------------------- 282 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 + +K G++ + +RHT+A A AN I +GH++ +Y +E Sbjct: 283 FKKLLKELGIQEHTIHDTRHTFATMLNNANANSTSIIRLIGHSNFSTTENIYTHKDTEEL 342 Query: 360 NAQVALLN 367 + LLN Sbjct: 343 RKAMELLN 350 >UniRef50_B4BIA4 Integrase family protein n=2 Tax=Geobacillus RepID=B4BIA4_9BACI Length = 384 Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 57/276 (20%), Positives = 116/276 (42%), Gaps = 29/276 (10%) Query: 91 VRKELLTGYQIPKSNYIVT-----------QPGRSAVTVNNYMTNLNAVFQFGVDNGYLA 139 +R ++ +Q K N I T G S + LN F V + Sbjct: 96 IRNHIMKYFQHKKINEITTFDIDSFYVDKLDTGYSGAYIRQMHNLLNQAFDQAVKWSLVK 155 Query: 140 DNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWE 199 NP K P K + +E R ++ ++ + + ++++TG+R GE+ L W+ Sbjct: 156 VNPVKNAKPPKVKSEEKITWTVDEVNRFLNLIKDSSMEIPYLLAIFTGMRRGEVLGLKWD 215 Query: 200 DIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDV 259 D+D +N + I+R+L F + + + +P + Q++++ +H+++V Sbjct: 216 DVDFENKKIRIKRSLC---FV-------SGKGLIFKEPKTKKSKRQISIS----QHVVNV 261 Query: 260 HFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDS---IRQMWDAAIKRAGLRHRKSYQ 316 + + E QK Q + + + D +D +RQ + I+ A + + Sbjct: 262 LKKHKQKQEFQKEKLGVQYQDNNLIVCTDDGKPLDPRNLLRQFY-RLIEEANVPRISFHD 320 Query: 317 SRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYG 352 RHT+A + G NP ++ ++GH+ + +Y Sbjct: 321 LRHTHATILMQQGENPKVVSERLGHSRVGITLDLYS 356 >UniRef50_C1CZ59 Putative Tyrosine recombinase xerC-like protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1CZ59_DEIDV Length = 379 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 70/301 (23%), Positives = 122/301 (40%), Gaps = 39/301 (12%) Query: 85 KEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFK 144 K +L +V+ + LT I + + G+SA + L V + N + Sbjct: 102 KPRLGKVQLDKLTPLHIEELVSALLAEGQSAKVALGCVKLLRTALTQAVRWQLVGRNVAQ 161 Query: 145 GISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLK 204 ++P K + + +E R + R + L+ +++ TG+R GEL L WE I++ Sbjct: 162 SVTPPKHTPKEMQVWTPDEASRFLAVAREHRLYALFYLALATGMRRGELLGLKWESINML 221 Query: 205 NGTMMIRRNLAKDRFT-----VPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDV 259 GT++++ NL DR + PKT+A + R I L ++ALR+ Sbjct: 222 AGTLVVQHNLI-DRVSSVTLETPKTRA-SRRTIALSPDTVEALRAH-------------- 265 Query: 260 HFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDA----AIKRAGLRHR--- 312 + ++ Q + + + +G F D M+ A A +R + R Sbjct: 266 ----------RHSQWLEQCKAGEKWQEHGMVFPSDVGTLMFPANLMGAFRRLCAKARVPA 315 Query: 313 -KSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + + RHT A + A P +A+++GH D +VY E A L L Sbjct: 316 IRLHDLRHTSASLLIRANVPPKVVADRLGHTDPGFTLRVYAHVYEEQRRAAALPLGEMLR 375 Query: 372 E 372 E Sbjct: 376 E 376 >UniRef50_A0JQA1 Phage integrase n=2 Tax=Lactobacillales RepID=A0JQA1_LACS1 Length = 381 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 75/331 (22%), Positives = 145/331 (43%), Gaps = 49/331 (14%) Query: 36 QDLTIKELAEKFLALKETEVAKTSLNTYRAVIKN-ILSIIGEKNLASSINKEKLLEVRKE 94 +++T E+ ++++ + V ++S T K+ IL I+G K IN+ +E + Sbjct: 64 ENITFGEVYDRWIVNYKLTVKESSFYTVELQYKSKILPILGNK----KINQITTIECQDL 119 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRT 154 + Y IP NY + N +T +F++ + D+P + K SR Sbjct: 120 INYWYSIPLKNY---------KAIFNLITR---IFKYAKQLKIVTDDPTSSVIIPKASRQ 167 Query: 155 IPDP------LSREEFIRLIDACRNQQAKNLWCVS---VYTGVRPGELCALGWEDIDLKN 205 + +R+E ++ + ++ + ++G+R E AL W DID + Sbjct: 168 FNNLEHSRNYYTRDELKTFLEYAEKHEKHKIYVLFRLLAFSGMRKSEALALTWNDIDFEK 227 Query: 206 GTMMIRRNL---AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLS-KEHIIDVHF 261 + I + + +K + T PKT++ +NR + + K + LR RLS K+ ++ F Sbjct: 228 AQITINKTIILVSKVKVTTPKTKS-SNRTVFIDKKTVSILREW----RLSQKKELLQKGF 282 Query: 262 REYGRTEKQKCTFVFQPEVSARVKNYGDHFTV-DSIRQMWDAAIKRAGLRHRKSYQSRHT 320 + VF P+ KN +H+ + +I +M + + + L H + RHT Sbjct: 283 NALSPNQ-----LVF-PD-----KN--NHYIIPTTISKMMNRVSEGSNLHHITVHGLRHT 329 Query: 321 YACWSLTAGANPAFIANQMGHADAQMVFQVY 351 YA + G + + Q+GH+ ++ VY Sbjct: 330 YATLAAQGGMSVKQLQAQLGHSKVEITLDVY 360 >UniRef50_D1VST0 Phage integrase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VST0_9FIRM Length = 360 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 58/241 (24%), Positives = 94/241 (39%), Gaps = 39/241 (16%) Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPL-SREEFIRLIDACRNQQ 175 T+NN +T A+F + V L +NP + + E + S EEF I+ ++ Sbjct: 133 TINNQLT---AIFNYAVKFHNLKNNPVHKVGTIGEKNAPEKEIWSIEEFNEFINLVEDKT 189 Query: 176 AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL----AKDRFTVPKTQAGTNRV 231 + + ++G R GEL AL W DID KN + I ++ KD T PKT+ R Sbjct: 190 LHLGFNILYWSGCRIGELLALTWNDIDFKNNIINIDKSYQRLNCKDVITEPKTKKSI-RK 248 Query: 232 IHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHF 291 I ++ I + S L ++P R+ N H Sbjct: 249 ITVVSDVIKEIESYKKL--------------------------FYKPGDDDRIFNCTKHK 282 Query: 292 TVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 +I + KR L+ + + RH++A L G N ++ ++GH Y Sbjct: 283 FEHAIINI----CKRNNLKRIRIHDLRHSHASLLLNEGINIVALSKRLGHEKVSTTLNTY 338 Query: 352 G 352 Sbjct: 339 S 339 >UniRef50_B9EBJ7 Integrase n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EBJ7_MACCJ Length = 374 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 49/212 (23%), Positives = 98/212 (46%), Gaps = 21/212 (9%) Query: 143 FKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKN--LWCVSVYTGVRPGELCALGWED 200 +K ++ KE + +P E+ ++ RN+ L+ + + TG+R GE CAL +ED Sbjct: 158 YKEVNMPKEKKYLP----LEDIKSFLEHVRNRSTIQYYLFRLIIETGLRVGEACALTYED 213 Query: 201 IDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVH 260 ID +N T+ + ++ + R + T+ G NR++H+ + + + + + K +++ Sbjct: 214 IDTENNTLNVTKSYDQKRKVLGPTKTGNNRIVHITQSLAKEINNLIQIQNAFK--VVN-- 269 Query: 261 FREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI-RQMWDAAIKRAGLRHRKSYQSRH 319 + K F+F E+ + H T+ I +M+ H ++ RH Sbjct: 270 ----EKVYNNKHNFIFVDELGNPIPRSTIHNTMVHITERMYGEG------NHLSIHELRH 319 Query: 320 TYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 T+A A I++++GH D + +VY Sbjct: 320 THASLLFQADVPLKAISSRLGHKDTNVTERVY 351 >UniRef50_Q88IR2 Integrase, putative n=1 Tax=Pseudomonas putida KT2440 RepID=Q88IR2_PSEPK Length = 139 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 6/119 (5%) Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWD 301 L ++ L +++ +D R ++ FVFQP N +IR Sbjct: 3 LLNERALNAINQAQRMDTLRRMASKSAHLTSPFVFQPSKGGLWINEPS----VTIRHF-K 57 Query: 302 AAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 +A+K +R R+ Y +RHTYA L G NPAFIA+Q+GH+ +M+ Y KW+S +++ Sbjct: 58 SALKALNIRERRQYDTRHTYATLCLMPGMNPAFIASQLGHS-VEMLLSTYAKWISSSSD 115 >UniRef50_B1B8Q2 Phage integrase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B8Q2_CLOBO Length = 366 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 75/320 (23%), Positives = 137/320 (42%), Gaps = 38/320 (11%) Query: 38 LTIKELAEKFL-ALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 +T+KE E +L + + ++ Y+ IK+I++ IG+ L S +N + + ++LL Sbjct: 62 MTVKEYIEYWLETYPKNNCSPSTYKRYKFFIKDIINYIGKHKL-SKLNPMIIQKFYEDLL 120 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP 156 + I SN V + R L+ + + +NP ++P K ++ Sbjct: 121 SDRNI--SNNTVIKTHRM----------LHLALKHAQQWQLINNNPCDLVTPPKATKQEM 168 Query: 157 DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL-- 214 +E +D + + +++ TG R GELCA+ W D+DL + T+ I + L Sbjct: 169 KYWQPDEINIYLDILKEEFLYPAIFLAIQTGCRVGELCAIKWSDVDLIDKTIRIDKTLQR 228 Query: 215 --AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKC 272 K PKTQ R I L++ AI L++ + R+ K+ +YG + Sbjct: 229 IDCKLALKYPKTQNSI-RTITLLETAITFLKN-LKKNRIEKK-------LKYG----IEL 275 Query: 273 TFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANP 332 +V E + H+ I Q + + + L + + RH++A L AG N Sbjct: 276 DYVLCWEDGRPI---DPHY----ISQHFPKLLDKYNLPKIRFHDLRHSHATLLLKAGVNA 328 Query: 333 AFIANQMGHADAQMVFQVYG 352 I+ ++GH+ Y Sbjct: 329 KIISKRLGHSTVAFTLDTYS 348 >UniRef50_A7VEW1 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VEW1_9CLOT Length = 379 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 69/277 (24%), Positives = 113/277 (40%), Gaps = 48/277 (17%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGI--------SPLKESRTIPDPLSREE 163 G T+ L + +F +N + NP K S KE+ TI D Sbjct: 127 GYKTTTIYQTRIALYNMLEFAKENEVIITNPCKKSVKSDIGKPSDKKEALTIDDQR---- 182 Query: 164 FIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL------AKD 217 R + A + Q + + ++ TG+R GEL L WEDI+ + T+ I R++ + Sbjct: 183 --RFLAAAKGQSYEYQYRFALQTGLRTGELVGLKWEDINFERKTLTIERSMEFRYKVGEW 240 Query: 218 RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQ 277 R PK+++G R I L AI L++Q R K +ID +E+ T VF Sbjct: 241 RVGPPKSKSGY-RTIPLTDEAICILKAQKEKNR--KIKVID---KEWADT-------VFL 287 Query: 278 PEVSARVKNYGDHFTVDSIRQMWDAAI----KRAGLRHRKSYQSRHTYACWSLTAGANPA 333 VKN +D A+ +AG++ + RHT+A + G P Sbjct: 288 CRKGQPVKN-----------STYDTALFKICDKAGIKRFSMHVLRHTFATRCIEGGMMPK 336 Query: 334 FIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + +GH++ + +Y E ++ L+ L Sbjct: 337 TLQKILGHSNIGITMNLYVHITEEEKQKEIDLVAEAL 373 >UniRef50_B0TX96 Phage integrase family protein n=19 Tax=Francisella RepID=B0TX96_FRAP2 Length = 293 Score = 64.3 bits (155), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 67/318 (21%), Positives = 133/318 (41%), Gaps = 60/318 (18%) Query: 40 IKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGY 99 I + L LK ++ ++N YR + + S I +K++ N + L+ V+K Sbjct: 7 IDNFLDNLLYLKN--YSQETINNYRRDLLQLNSSIVDKDITKLENNDILMWVKK------ 58 Query: 100 QIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPL 159 + G S+ T+ +++L + F F +++ + +NP GI K S+ +P + Sbjct: 59 --------LHAQGNSSKTLQRKLSSLRSFFNFLINSELIKNNPTTGIKAPKSSKKLPKAV 110 Query: 160 SREEFIRLID--ACRNQQAKNLWCVSVY--TGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 + +E L+D N + +++ C + G+R EL ++ +DI++ ++ + Sbjct: 111 NTDELAYLLDIKPSNNIETRDIACFDLLYSCGIRLSELSSIELKDININQKSIRVIGKGN 170 Query: 216 KDRFTV--PKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCT 273 K+R KT NR ++ TR T KC Sbjct: 171 KERVVYFGSKTLINLNRWLN---------------TR---------------DTYSPKCN 200 Query: 274 FVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPA 333 F+F + G+H T SI++ + ++ +H + RH++A L + + Sbjct: 201 FLF-------ISQNGEHLTNRSIQKRIEIFAQKYATKHIHPHMLRHSFATHVLDSSKDLL 253 Query: 334 FIANQMGHADAQMVFQVY 351 + + +GHAD Q+Y Sbjct: 254 AVKDLLGHADISST-QIY 270 >UniRef50_B8FRH1 Integrase family protein n=3 Tax=Clostridiales RepID=B8FRH1_DESHD Length = 298 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 104/257 (40%), Gaps = 47/257 (18%) Query: 108 VTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRL 167 +T G ++ ++ L A F+F G L NP + I+ K R +P LS EE RL Sbjct: 66 MTDRGLERKSMARKLSALRAFFKFLCREGILQKNPIQRIATPKLGRKLPHFLSLEELDRL 125 Query: 168 I---DACRNQQAKNLWCVSVY--TGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVP 222 I D A++ + + +G+R EL L +DID + + +R Sbjct: 126 IRTPDCATLLGARDQVILELLYGSGLRVSELADLNRQDIDAGSSLLRVR----------- 174 Query: 223 KTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSA 282 + R++ L A++A R + + R +KQ+ + Sbjct: 175 -GKGNKERIVPLTNYALEAARQYLEM-----------------REDKQEALLL------- 209 Query: 283 RVKNY-GDHFTVDSIRQMWDAAIKRAGL-RHRKSYQSRHTYACWSLTAGANPAFIANQMG 340 NY G +V SIR++ D AGL +H + RH++A L GA+ + +G Sbjct: 210 ---NYQGTRLSVRSIRRILDGLALEAGLSQHLHPHMLRHSFATHLLDGGADLRSVQELLG 266 Query: 341 HADAQMVFQVYGKWMSE 357 HA Q+Y E Sbjct: 267 HAKLSST-QIYTHLTKE 282 >UniRef50_C6QLH5 Integrase family protein n=2 Tax=Geobacillus RepID=C6QLH5_9BACI Length = 199 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 22/178 (12%) Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFT------VPKTQAGTNRVIH 233 + V V TG+R GEL L WEDID KN T+ I L + + KT + NRVI Sbjct: 17 FLVGVVTGIRRGELLGLKWEDIDFKNKTITINGTLYRRKGEGLKYKPKTKTDSSDNRVIP 76 Query: 234 LIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV 293 + ++ LR + L ++E + + + E FVF + + G Sbjct: 77 IPDAIVEVLRKEKALQDKTREKLGNSYNSE---------NFVF-------INDKGKPIDP 120 Query: 294 DSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 D + + + +K ++ + RHT A + G + +++ +GH+ Q+ Y Sbjct: 121 DYLTRKFRETVKTLNVKQINLHGLRHTAATLLMKLGVHVKIVSDILGHSRVQVTLDYY 178 >UniRef50_C9R814 Integrase family protein n=2 Tax=Ammonifex degensii KC4 RepID=C9R814_AMMDK Length = 391 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 24/242 (9%) Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNPFKGI-SPLKESRTIPDPLSREE---FIRLIDACR 172 T ++ ++ L +P +G+ +P E++ I P + EE F+ ++ R Sbjct: 128 TAKEVFSSFRQALRWARKRKLLHHDPTEGVPAPRGETQEI-TPWTGEEAARFLEYLEKAR 186 Query: 173 NQQA-KNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL--AKDRFTVPKTQAGTN 229 ++A K + +++ TG+R GEL AL W+D+DLK G + +RR A F PKT+ Sbjct: 187 MRKAYKAFFRLALATGMRLGELQALRWQDVDLKRGEVCVRRTYSEAGKCFHEPKTKKARR 246 Query: 230 RVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGD 289 R+ I P A L KE + + G +++ F + G Sbjct: 247 RIP--IDPVTTAW-----LREWRKEQLEERLRAGEGWADREGLVFTTRK---------GT 290 Query: 290 HFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQ 349 D + + A + AG+ + + RHT+A L +P + ++GHA + Sbjct: 291 VVDRDDLLRALRRACREAGVPGIRFHDLRHTHASLLLRQNVHPKVVQERLGHASVKTTLD 350 Query: 350 VY 351 +Y Sbjct: 351 LY 352 >UniRef50_C8NEN7 Integrase/recombinase XerC n=2 Tax=Granulicatella RepID=C8NEN7_9LACT Length = 318 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 36/232 (15%) Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREE---FIRLIDACRN 173 +++ ++++L + + F V+ + NPF +S K +P+ +E FI ID ++ Sbjct: 70 SISRFLSSLRSFYHFLVERKAVESNPFASVSYKKGKMLLPEFFYEDEIEKFINSIDGNQS 129 Query: 174 QQAKNLWCVSVY--TGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRV 231 +N V V TG+R EL L E +DL N +++ +K+R+ Sbjct: 130 LDQRNKALVEVLYATGMRVSELTNLTLEQLDLDNSIILVIGKGSKERYV----------- 178 Query: 232 IHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHF 291 P D R+ + E ++ ++ E+++ FVF V + GD Sbjct: 179 -----PIGDFARTAL-------ETYLEEGRKDLMAKERKEHFFVF-------VNHLGDPL 219 Query: 292 TVDSIRQMWDAAIKRAGLRHR-KSYQSRHTYACWSLTAGANPAFIANQMGHA 342 T + +R + + I+ +GL + + RHT+A L GA+ + +GH Sbjct: 220 TTNGVRYILEKLIQESGLTLKIHPHMLRHTFATHLLNNGADMRTVQELLGHV 271 >UniRef50_B1HX61 Tyrosine recombinase xerC-like protein n=3 Tax=Bacillaceae RepID=B1HX61_LYSSC Length = 395 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 99/235 (42%), Gaps = 26/235 (11%) Query: 151 ESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 E+ P+ L F++ N + YTG+R GE C L W++ID KN T+ I Sbjct: 187 ENYLTPEELGL--FLKTAKETENITNYTFLLLIAYTGIRRGEACGLQWKNIDFKNNTITI 244 Query: 211 RRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQ 270 R + PKT+ + R I + K + L T + + +G+ K Sbjct: 245 ERTRDQKGTRTPKTK-NSLRTIKVEKSVLAQLEKYHTWCKAT--------LFAFGKKIKD 295 Query: 271 KCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGA 330 ++VF VS + G+ + + M I++A L + RHT+ L G Sbjct: 296 -TSYVF---VSYQT---GEPISDSGLLYMTRRVIEKASLPEITLHGLRHTHCTVLLNKGV 348 Query: 331 NPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNEAMKN 385 N IA ++G+ A M+++VYG + E V + F+ ++ N KN Sbjct: 349 NVKVIAERLGNTPA-MIYEVYGHVLKELEEETVQI-------FSDSIGANSGAKN 395 >UniRef50_Q1RJE3 Integrase n=9 Tax=Rickettsia RepID=Q1RJE3_RICBR Length = 388 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 43/228 (18%) Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC---RNQQ 175 N ++ L+ VF ++ L NP GI KE ++ L+REE R A +NQ Sbjct: 169 NRFLEVLSPVFSKAIEWELLTVNPVIGIKKHKE-QSRDRYLTREEIPRFFTAISEEQNQV 227 Query: 176 AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLI 235 K+ + +++YT VR + + WE I + A + +P T+ G + L+ Sbjct: 228 MKDFFLIALYTSVRKDNVLTMRWEQI-----------SFADKQLYLPDTKNGDPHRLPLL 276 Query: 236 KPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDS 295 A++ L++ R E+ +VF E S+ H + Sbjct: 277 DQAVEILKA---------------------RKEQSDSIWVFPSETSS-----SGH--LQE 308 Query: 296 IRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHAD 343 ++ W K+AG+ + + + R T W GAN I + H D Sbjct: 309 PKKAWKRICKKAGIENLRIHDLRRTIPSWMAMTGANQYVIGQLLNHRD 356 >UniRef50_C3L682 Prophage LambdaBa04, site-specific recombinase, phage integrase family n=10 Tax=Bacillus anthracis RepID=C3L682_BACAC Length = 374 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 78/329 (23%), Positives = 138/329 (41%), Gaps = 49/329 (14%) Query: 36 QDLTIKELAEKFLA-LKETEVAKTSLNTY-RAVIKNILSIIGEKNLASSINKEKLLEVRK 93 ++ T+ E +++L + V +T+ Y RA+ I+ ++G L K Sbjct: 61 KNFTLSEYLQEWLENTAKQRVRETTFTNYKRAINSRIIPVLGSHKL-------------K 107 Query: 94 EL--LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE 151 +L L G + KS + G S + L + V L NPF+ + + Sbjct: 108 DLKPLHGQRFVKS---LIDEGLSPAYIEYIFIVLKGSLEDAVRWELLFKNPFQHVEIPRP 164 Query: 152 SRTIPDPLSREEFIRLIDACR--NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMM 209 + + S EE + ++ + N +L+ +++ TG+R GE+ L W++ DL G + Sbjct: 165 RKVVNSTWSIEETKKFLNRTKFENVIYYHLFLLALNTGMRRGEILGLKWKNFDLNEGKIS 224 Query: 210 IRRNLAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 + L D RFT PKT G+ R+I +ID L KE F+ Y Sbjct: 225 VTETLIYDENGFRFTEPKTH-GSKRLI-----SIDQ--------NLCKE------FKSYK 264 Query: 266 RTEKQ-KCTFVFQPEVSARV--KNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYA 322 + + K F E + V K G ++ ++ IK+A + + + RHT+A Sbjct: 265 AKQNEFKLLFGQSYEDNDLVFAKETGQPILPRTMTTTFNQFIKKADVPQIRFHDLRHTHA 324 Query: 323 CWSLTAGANPAFIANQMGHADAQMVFQVY 351 L G NP ++ ++GH+ + Y Sbjct: 325 TILLKLGINPKIVSERLGHSSIKTTLDTY 353 >UniRef50_Q03L48 Integrase n=30 Tax=Streptococcus RepID=Q03L48_STRTD Length = 388 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 26/215 (12%) Query: 162 EEFIRLIDACRNQQAKNLWCVSVY-----TGVRPGELCALGWEDIDLKNGTMMIRRNLAK 216 ++F+ +D+ N + KN + +++Y TG R E AL W DIDL N + I + L Sbjct: 191 KQFLTYLDSLDNSKYKNYYDITLYKFLLATGCRINEALALSWSDIDLDNSVVHITKTLNY 250 Query: 217 D-RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFV 275 + + PK+++G R I + K + ++ +H + GRTE T V Sbjct: 251 EMKLNSPKSKSGY-RDIDIDKQTVTMMKRY--------QHKQTQEAWKLGRTE----TVV 297 Query: 276 FQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFI 335 F S + Y + T+ S KRAG+ + + RHT+A L +G + Sbjct: 298 F----SDFIHEYPNSRTLQS---RLGTHFKRAGVTNIGFHGFRHTHASLLLNSGIPYKEL 350 Query: 336 ANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 +++GH+ M +Y EN V+ L Sbjct: 351 QHRLGHSKLSMTMDIYSHLSKENAKKAVSFYEVAL 385 >UniRef50_C8WAJ5 Integrase family protein n=2 Tax=Atopobium RepID=C8WAJ5_ATOPD Length = 305 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 117/253 (46%), Gaps = 41/253 (16%) Query: 108 VTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRL 167 + Q SA T+N +++ L +++ +A +P +S + R +P ++ + RL Sbjct: 65 LKQAQYSAKTLNRHLSALRGFYKWMQREKLIATDPALALSNPRAPRNLPHTMTDSDVNRL 124 Query: 168 IDACRNQQAKNL----WCVSVY-TGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVP 222 +++C A L + +Y TG R E+ L E +DL+NGT+ + +K+ Sbjct: 125 LESCDVSTAAGLRDRAFLEFLYATGARISEVATLRLEQVDLQNGTVRLFGKGSKE----- 179 Query: 223 KTQAGTNRVIHLIKPAIDALRSQMTLTR---LSKEHIIDVHFREYGRTEKQKCTFVFQPE 279 R++ L + AI+ L+ + +R L K+ VH + +F Sbjct: 180 -------RIVPLYESAIEWLKKYLRSSRPTLLLKDKTGRVH------------SALF--- 217 Query: 280 VSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKS-YQSRHTYACWSLTAGANPAFIANQ 338 +S R G++ + DS+R+++ + + AGL S + RHTYA L GA+ + Sbjct: 218 ISVR----GNNMSADSLRKVFSSYLTAAGLDSSLSPHAMRHTYATELLGGGADLRIVQEL 273 Query: 339 MGHADAQMVFQVY 351 +GH ++ QVY Sbjct: 274 LGH-ESLSTTQVY 285 >UniRef50_Q854V7 Gp41 n=1 Tax=Mycobacterium phage Che9c RepID=Q854V7_9CAUD Length = 400 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/318 (22%), Positives = 130/318 (40%), Gaps = 26/318 (8%) Query: 39 TIKELAEKFLALKET-EVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLT 97 T++E + +LA K A+++++ Y + ++ +GE + + K L ++ L Sbjct: 77 TVREACDDWLAGKRAANRAESTVDGYEEKLTVVIEQLGEIEI-QKLTKRHLDDLVTALRE 135 Query: 98 GYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPD 157 G +P N +P S +VN + L ++ + G+ N + ++ + T PD Sbjct: 136 G-GLPSPNGKPRKPW-SPRSVNYLLGLLVSILESEQKQGHTVRNVAALVDRIEANPTPPD 193 Query: 158 PLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI---RRNL 214 PL+ E L+ + W +++ G R E+ L W D+DL T+ + R Sbjct: 194 PLTESEVETLLAHIAGDRYAIAWELAL-AGFRLAEISGLRWCDVDLDARTVTVQNTRLQR 252 Query: 215 AKDRF-TVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCT 273 K R PK++A + R + L A ++ R+ ++ + Sbjct: 253 GKKRIEKTPKSRA-SRRELPLPDDLFAAFKAA----------------RKIQAADQLRLG 295 Query: 274 FVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPA 333 ++ V G T ++I W +K AGLRH + + +RHT G A Sbjct: 296 EAYEASGYVVVNEAGTPLTPNAIENRWARVLKAAGLRHVRLHDARHTCGTLMHLRGVPTA 355 Query: 334 FIANQMGHADAQMVFQVY 351 I+ +GHA Q Y Sbjct: 356 LISAWLGHASKAFTLQTY 373 >UniRef50_UPI0001BCC5A1 phage integrase n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCC5A1 Length = 416 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 81/324 (25%), Positives = 128/324 (39%), Gaps = 56/324 (17%) Query: 76 EKNLASSINKEKLLEVRKELLTGYQIPKSNYIV-----------------TQPGR--SAV 116 E LA+ + K K +E + LL + +P+ + Q GR SA Sbjct: 68 ETWLATLVVKPKTMESYESLLRCHVLPRWGAVRLESVALADVKAWVAGMRQQNGRPLSAS 127 Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLID------- 169 L + V++G LA N K S SR++ P+ R+ + + Sbjct: 128 RTKQAYQVLTMMLDLAVEDGRLARNSAKPAS--GRSRSMVPPVQRDRAKKYLTPRQLEAL 185 Query: 170 ACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTV--PKTQAG 227 A + L YTG+R GE AL D+DL + +RR++++ R ++ T++ Sbjct: 186 AGAAGDGRVLILTLGYTGLRWGEASALRVSDVDLLGRRIHVRRSISEVRGSLVFGTTKSH 245 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 R + + K L E +ID GR F ++N+ Sbjct: 246 ATRTVPITKSLAVEL-----------EALID------GRGPDDPL-FAAPGGGWLHLRNF 287 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 R+ +D A+ RAGL H + RHT A +++AGAN + +GHA A M Sbjct: 288 --------RRRDFDPAVARAGLPHITPHGLRHTAASIAVSAGANVKAVQKMLGHASAAMT 339 Query: 348 FQVYGKWMSENNNAQVALLNTQLS 371 VY E+ +A L T S Sbjct: 340 LDVYADLFDEDMDALAERLETTAS 363 >UniRef50_C9RA80 Integrase family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RA80_AMMDK Length = 383 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/265 (23%), Positives = 103/265 (38%), Gaps = 27/265 (10%) Query: 114 SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRN 173 S TV + LN + V + NP + + +++R P L E RL+ A Sbjct: 137 SPTTVRHAALVLNKALRDAVKKRLIPYNPMEAVDKPRKARKEPPALKEGELRRLMSAAEG 196 Query: 174 QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI----RRNLAKD-RFTVPKTQAGT 228 ++VYTG R GE+ L W D+D + G + I +RNL + F PKT Sbjct: 197 TYLYAPITLAVYTGARLGEILGLRWRDVDFEAGCIFILQALKRNLKGELYFDEPKTPRSR 256 Query: 229 NRVIHLIKPA-IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEV-SARVKN 286 R+ I PA + ALR Q L K ++E G ++ P S+ + Sbjct: 257 RRI--EIGPACLAALRKQKKLQAEWKLKAGSA-WQETGLVCTREDGSPIDPHAFSSAFRK 313 Query: 287 YGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 +D+ + RHT+A L AG + ++ ++GHA + Sbjct: 314 LASKLGIDA-----------------NFHALRHTHATMLLKAGVHLKIVSERLGHASVAI 356 Query: 347 VFQVYGKWMSENNNAQVALLNTQLS 371 +Y + L+ +L+ Sbjct: 357 TGDLYSHVLPGMQGGAAQLVEEELN 381 >UniRef50_A4U1R8 Phage-related integrase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1R8_9PROT Length = 396 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 42/208 (20%) Query: 37 DLTIKELAEKFLA-LKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEK---LLEVR 92 D TIK++ E ++A L V KT + Y ++ K ++ +IGE + +E+ +L + Sbjct: 30 DRTIKQVYEGYMADLSRQFVGKTKI-AYDSIYKMLIEVIGENTPIRQLTRERCRGVLNLL 88 Query: 93 KEL----------LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNP 142 ++L LT Q + + P SA TVN Y+ L+A+ + V+ GYL NP Sbjct: 89 RQLPANAVKKYPKLTLKQAAERGSLDGAPTISAGTVNGYIQKLSALLSWSVNEGYLDKNP 148 Query: 143 FKGISPLKESRTIPDPLSREEFI-----RLIDA-----CRNQQA------------KNLW 180 +G LK T+ R+ F+ ++ DA CRN A W Sbjct: 149 ARG---LKVVDTVKRKDKRQPFVPWQLQKIFDAPLYRGCRNDGAGYSSPGNDKPRRGRFW 205 Query: 181 C--VSVYTGVRPGELCALGWEDIDLKNG 206 +++++G+R E+C L ED+ + +G Sbjct: 206 VPLIALFSGMRLNEICQLNVEDMRVVDG 233 >UniRef50_C7TH34 Phage-related integrase n=1 Tax=Lactobacillus rhamnosus Lc 705 RepID=C7TH34_LACRL Length = 383 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 81/337 (24%), Positives = 139/337 (41%), Gaps = 51/337 (15%) Query: 49 ALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIV 108 A K T T TY + K++L + G K INK +T Q+ ++ V Sbjct: 79 AYKNTVRESTYERTYIQIKKHVLPLFGNK----PINK----------ITTAQLQQA---V 121 Query: 109 TQPGRSAVTVN--NYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLS----RE 162 Q + VT N ++T + + +F + GY+ NP + KE I D + ++ Sbjct: 122 NQWSKQ-VTRNYRRWLTTASRILRFALRRGYINKNPADLVIIPKEKEQIGDVAANFWDKQ 180 Query: 163 EFIRL---IDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD-- 217 E R IDA + Q L+ + + G+R GE AL W+DI + T+ + + L++ Sbjct: 181 ELTRFFSYIDAKQEPQKTALFRILAFGGLRRGECLALTWKDISFTDSTITVNKTLSQGMN 240 Query: 218 --RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFV 275 + P + R I + + AL+ L +L K + G + V Sbjct: 241 GRQLVQPPKTRKSRRTITMDSKTMSALK-HWRLVQLQK-------YMALGFNANKPDQLV 292 Query: 276 FQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQS-RHTYACWSLTAGANPAF 334 F +++ K+ H D ++ + D + HR + RH++A +AGA Sbjct: 293 FS---NSKNKHLLLHKPADWLKSIEDT----HKIEHRITIHGFRHSHASALFSAGATVKE 345 Query: 335 IANQMGHADAQMVFQVYGKWMSENN----NAQVALLN 367 + ++GH+D + +Y N N VA LN Sbjct: 346 VQERLGHSDVKTTLNIYTHVTKNQNKEAVNKLVAYLN 382 >UniRef50_UPI0001C39245 phage integrase family protein n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C39245 Length = 368 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/249 (24%), Positives = 106/249 (42%), Gaps = 40/249 (16%) Query: 117 TVNNYMTNLNAVFQFGVDNGYLAD-NPFKGISP----LKESRTIPD--PLSREEFIRLID 169 T +T LNA F + ++ +++ +PF G+S LK++ + P + E R+I Sbjct: 136 TTKRLLTQLNACFNWAIEKRLVSEPSPFNGLSAKANRLKKASDSDEINPFTANERDRIIQ 195 Query: 170 ACRNQQAKNLWCVSV----YTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRF--TVPK 223 ++ + +C+ V +TG RP E AL W D+ +L+K F + Sbjct: 196 CFESEPKHSHFCLYVRFCFFTGCRPSEAIALRWSDV---------AGDLSKITFNTVIVS 246 Query: 224 TQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSAR 283 + G R D L++Q E + + RE + F P + + Sbjct: 247 GEGGRKRC--------DGLKTQTRRNFPCNEQV-QIILREARSRNNSEIVF---PSKTGK 294 Query: 284 VKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHAD 343 GD T + W ++ G+ HRK YQ RHT+ L AG + +A +G++ Sbjct: 295 PIQVGDFCT-----KHWHPVLEIMGIEHRKPYQMRHTFITLCLEAGIDAKDVATWVGNS- 348 Query: 344 AQMVFQVYG 352 Q+++Q Y Sbjct: 349 PQVIYQNYA 357 >UniRef50_D2BJR0 Site-specific recombinase, phage integrase family n=2 Tax=Dehalococcoides RepID=D2BJR0_DEHSV Length = 385 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/286 (22%), Positives = 118/286 (41%), Gaps = 30/286 (10%) Query: 78 NLASSINKEKLLEVRKELLTGYQIPK-SNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNG 136 +L ++ + +L ++R E + Y S V+ G SA TV ++ L+ V G Sbjct: 97 HLTPNLGRIELTQLRPEHIQAYYSKALSGGRVSGGGLSAQTVKHHHRVLSEALNHAVKWG 156 Query: 137 YLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKN------LWCVSVYTGVRP 190 LA N + P + + ++ E+ L + + + ++ +++TG+R Sbjct: 157 LLARNVAMAVDPPRPEKREMHTIAPEDMSVLFEEAAKMEKNSGLPYELIFMTALHTGMRR 216 Query: 191 GELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTR 250 GE+ AL W DIDL + +R +L Q N I + +P R +++T Sbjct: 217 GEILALRWSDIDLAKSKIYVRCSL----------QCLKNGEIIIREPKTPGSRRLVSMTP 266 Query: 251 LSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHF-----TVDSIRQMWDAAIK 305 E +I +H E + Q + HF +++ + K Sbjct: 267 SLLEKLI-IH------KESSSANMILQGKTLQGDSLVFAHFDGTPINPNTVSPAFAKIAK 319 Query: 306 RAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 RAGL R + RH++A LTAG +P ++ ++GH+ Y Sbjct: 320 RAGLNLR-LHDLRHSHATLMLTAGVHPKIVSERLGHSTVAFTLDTY 364 >UniRef50_UPI0001C376B0 phage integrase family site specific recombinase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C376B0 Length = 360 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/321 (23%), Positives = 138/321 (42%), Gaps = 57/321 (17%) Query: 43 LAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIP 102 E F +K+ T+ N K+IL GEK + SSI K+ L K L + Sbjct: 65 FEEWFTNVKQKVKISTACNYLMKAKKHILPEFGEKTI-SSIQKDSLYSFIKTLQSK---- 119 Query: 103 KSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSRE 162 S+ + + + L++VF++ V N Y NPF + K+ + L + Sbjct: 120 ---------KLSSRYIRDILVLLSSVFKYAV-NTYHIYNPFDDVVIPKKKYSDVKLLDED 169 Query: 163 EFIRLIDACRNQQAKNLW--CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR-- 218 E L D + + +S YTG+R GELCAL W+DID++ + +R+ + + + Sbjct: 170 EQQILRDELFSNPNRTTLGIALSYYTGIRIGELCALQWKDIDIEKRLLTVRKTVQRIQLP 229 Query: 219 FTVPKTQA--------GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQ 270 + PKT+ + RVI P D + +TL ++ K ++ D + + K+ Sbjct: 230 YGTPKTKVIITEPKSESSVRVI----PIPDCI---ITLMKIYKGNLDD-----FILSGKE 277 Query: 271 KCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGA 330 K T +P +++ +++ +K GL + RH +A + GA Sbjct: 278 KPT---EPR---------------TMQYRFNSFLKNVGLPSIHFHALRHLFASNCIKLGA 319 Query: 331 NPAFIANQMGHADAQMVFQVY 351 + ++ +GH+ ++ Y Sbjct: 320 DVKSLSEILGHSSVEITLNRY 340 >UniRef50_C7GI02 Site-specific recombinase, phage integrase family n=12 Tax=Bacteria RepID=C7GI02_9FIRM Length = 431 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 75/376 (19%), Positives = 149/376 (39%), Gaps = 41/376 (10%) Query: 29 EKFGEARQDLTIKELAEKFLA--LKETEVAKTSLNTYRAVIKNILS-IIGEKNLASSINK 85 +KF +LT+ +L + + LK ++ ++ Y I+NI + E+ L ++ Sbjct: 54 KKFVAKADNLTVGQLLDVWAEEELKTGTLSNGTVENYLGTIRNIKKHPLAERKL-KNVTS 112 Query: 86 EKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGV-DNGYLADNPFK 144 E L L G P + G S ++++ + F+F V Y+ NP + Sbjct: 113 EHLQSFFDLLSFGGVHPDGK---ERKGYSKDYIHSFSAVMQQSFRFAVFPKQYITFNPMQ 169 Query: 145 GISPLKESRTIP-----------DPLSREEFIRLIDACRNQQAKNLWCVSV--YTGVRPG 191 I ++ + P+SRE++ RL+ + + + + + Y G+R G Sbjct: 170 YIKLRYQTDEVDLFSDEDMDGNVQPISREDYERLLAYLQKKNPAAILPIQIAYYAGLRIG 229 Query: 192 ELCALGWEDIDLKNGTMMIRRNL----AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMT 247 E C L W+D++L+ + IRR++ +K ++ + T+ RV+ ++ R+ Sbjct: 230 EACGLAWQDVNLEEQCLTIRRSIRYDGSKRKYIIGPTKRKKVRVVDFGDTLVEIFRNARK 289 Query: 248 LTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY-GDHFTVDSIRQMWDAAIK- 305 ++ +++ Y + K+K ++ R + D+ + + D ++ Sbjct: 290 EQLKNRMQYEELYHTNYYKEVKEKNRVYYEYYCLDRTQEVPADYKEISFVCLRPDGCLEL 349 Query: 306 --------------RAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 G +Q RHTY L GA P + +GH+D VY Sbjct: 350 PTTLGTVCRKVAKALEGFEGFHFHQLRHTYTSNLLANGAAPKDVQELLGHSDVSTTMNVY 409 Query: 352 GKWMSENNNAQVALLN 367 + V LL+ Sbjct: 410 AHSTRDAKRKSVRLLD 425 >UniRef50_Q65KI2 Hypothetical Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65KI2_BACLD Length = 352 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/329 (21%), Positives = 139/329 (42%), Gaps = 55/329 (16%) Query: 39 TIKELAEKFLALKETE-VAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVR----- 92 T+ ++ ++ +K +E + K +++ YR V +++ K L++S+ + R Sbjct: 23 TLSDVCKQICNVKMSEGLTKETIDRYRRVCESVEEFAEIKGLSTSVESIDVEFARQYMTY 82 Query: 93 ----KELLTGYQI-PKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS 147 K+ G++ P+S V PG S N+++ + AVF F + +++NPF+ I+ Sbjct: 83 ILHEKKTFKGHRYKPES---VKTPGCSPKYANDHLKTMRAVFTFCIKENMISENPFQKIN 139 Query: 148 PLKESRTIPDPLSREEFIRLIDACRNQQAKN------LWCVSVYTGVRPGELCALGWEDI 201 +K+ + LS EE +L+ ++ + C+ + + R GE+ L E+I Sbjct: 140 KVKQPEPVIQILSVEEMKQLLKTPNKRKFSEFRDYVVMMCL-INSMCRIGEIVTLEIENI 198 Query: 202 DLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHF 261 + + +++ KT+ R+I L K + L+ L R ++ Sbjct: 199 NFELSYIILE---------AQKTKTRKGRMIPLDKNTMQLLKK--LLLRNTR-------- 239 Query: 262 REYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHR-KSYQSRHT 320 F+P + G T D+ R+ +AG+ R + RHT Sbjct: 240 --------------FKPSKYVFITEEGTRLTTDNFRKRLADYAHQAGINKRVHPHLFRHT 285 Query: 321 YACWSLTAGANPAFIANQMGHADAQMVFQ 349 A L AG + + +GH D +MV + Sbjct: 286 AASMFLQAGGDLRHLQTIIGHKDLRMVLR 314 >UniRef50_D1CCF9 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCF9_THET1 Length = 357 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 75/323 (23%), Positives = 127/323 (39%), Gaps = 55/323 (17%) Query: 38 LTIKELAEKFLALKETEV-AKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 LT+++ ++L ++ E+ T +N R + ++I +G + L + LE+ + L Sbjct: 61 LTLEQYLAEWLEVRSRELRVSTRVNYQRLIEQHICPALGGRRLQALAA----LELSRWLA 116 Query: 97 -TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 G ++P+ L+ V G LA NP + P K R Sbjct: 117 GLGERLPRR-------------AQEAYALLHKALADAVRLGLLATNPLDRVEPPKHQRRR 163 Query: 156 PDPLSREEFIRLIDACRNQQA---KNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 P +R++ LI A +A L + +G R GE L W D+D + G++ I R Sbjct: 164 PTLPARDQIALLIAALEAGKAGWYSELLLFLLGSGCRIGEALGLEWGDVDWQEGSVRISR 223 Query: 213 NLAKDRFTV----PKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTE 268 L + V PK++AG RVI L A++ALR Q Sbjct: 224 QLLEVGGEVHESPPKSRAG-ERVIALPAFALEALRQQRA--------------------- 261 Query: 269 KQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTA 328 K+ + F + + G ++ + A GL + + RH +A A Sbjct: 262 KKLGKYCF-------LSSTGTTPCRRNVLRALHAVCAELGLPRLRIHDLRHVHASLLAHA 314 Query: 329 GANPAFIANQMGHADAQMVFQVY 351 G P +++GH+ + QVY Sbjct: 315 GVPPKVAQSRLGHSSPMVTLQVY 337 >UniRef50_D1PRY2 Site-specific recombinase, phage integrase family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRY2_9FIRM Length = 391 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 80/315 (25%), Positives = 133/315 (42%), Gaps = 36/315 (11%) Query: 50 LKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTG-YQIPKSNYIV 108 L++ K + +TY ++I I+ ++ KL ++RKE + Y+ +S + Sbjct: 81 LRDIAPDKLAASTYSRDQQDIRRIL------PALGHYKLTDLRKETIRAFYEAMRSEPKL 134 Query: 109 T--QPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFI- 165 T QP S +V L ++ VD GYL NP + K R P++ EE + Sbjct: 135 TDGQP-LSERSVEGLHNTLCSILSGAVDEGYLTHNPAWRVYKPKGVRK-ERPVADEETVQ 192 Query: 166 RLIDACRNQQAKN--LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK----DRF 219 ++I A Q K + + + TG+R GE C L W DID ++ T+ ++R + K F Sbjct: 193 KMIAALETQSMKYEVYFKLVLATGMRRGEACGLRWSDIDWRHRTIHVQRTVVKLSGQKIF 252 Query: 220 TV-PKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQP 278 T PKT +G NR +++ K L++ E + G+T ++ QP Sbjct: 253 TKEPKTASG-NRRVYISKEMCKLLKAWKQECAWQME-------QAEGQTLTEEDYLFRQP 304 Query: 279 EVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQS-RHTYACWSLTAGANPAFIAN 337 GD + + +K GL S S RHT A + G + +A Sbjct: 305 S--------GDPMVPTTFTFRFKKILKENGLPQNLSVHSLRHTNASLLIAQGVDVRTVAG 356 Query: 338 QMGHADAQMVFQVYG 352 +GH+ +Y Sbjct: 357 LLGHSQPSTTLDIYA 371 >UniRef50_Q0W0L4 Integrase n=2 Tax=Euryarchaeota RepID=Q0W0L4_UNCMA Length = 278 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%) Query: 105 NYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEF 164 NY++ + S TV N ++ L + + F +DNGY++ NP +GI+ +K + P L+ E Sbjct: 57 NYLMFEKHLSKTTVANVLSVLKSFYSFMLDNGYVSSNPTRGINNIKLDKKAPVYLTVSEM 116 Query: 165 IRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFT-VPK 223 L+D + + + + + TGVR EL + +DID T+ + AK+R VP+ Sbjct: 117 NDLLDTAIDTRDRIIVRLLYATGVRVSELVNIRKKDIDFDRCTIKVFGKGAKERIVLVPE 176 Query: 224 T 224 T Sbjct: 177 T 177 >UniRef50_UPI0001C37419 Phage integrase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37419 Length = 386 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 86/363 (23%), Positives = 147/363 (40%), Gaps = 43/363 (11%) Query: 22 FPSSRNLEKFGEARQDLTIKELAE-KFLALKETEVAKTSLNTYRAVIKN-ILSIIGEKNL 79 F R+ + + + +++ ELAE F E+ T++ Y + +N I I+G K L Sbjct: 52 FEFERHCKGYAQLNENMRFYELAEWYFENYAPEELKPTTVLNYESQYRNHIAPILGNKKL 111 Query: 80 ASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLA 139 I L E K L + + + ++V + ++++ + G+ Sbjct: 112 -KDITTPMLTEFLKVLGKEHHL------------NPISVRKVYIVVQSIYRRALQQGFAR 158 Query: 140 DNPFKG-ISPLKESRTIPDPLSREE---FIRLI-DACRNQQAKNLWCVSVYTGVRPGELC 194 DNP + I P K LS EE F+ LI D ++ K + V ++TG+R GE Sbjct: 159 DNPCQNVIIPKKRDSGKRYSLSEEETKRFLHLIRDKPWDEDVKRILIVLLFTGMRIGECL 218 Query: 195 ALGWEDIDLKNGTMMIRRNLA----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTR 250 L WEDID + T+ I L+ K PKT++ R+I + L Q Sbjct: 219 GLAWEDIDFEKKTIFIHHTLSCVDGKCYLDSPKTKSSI-RLIAMNSTVEKYLNDQQAYVE 277 Query: 251 LSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV-DSIRQMWDAAIKRAGL 309 K + + +Y E VF P NY D +V S+++M K Sbjct: 278 QLKMALGN----KYAHPE-----MVF-PSGQG---NYRDRSSVYHSLKRM----TKGTEF 320 Query: 310 RHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQ 369 ++ RH A L +G + I+ +GH D + +Y + + ++ + Sbjct: 321 EDMTLHKLRHCNATLLLNSGVDLKVISEHLGHCDIGVTANIYADVLRKQKIRLADTIDDK 380 Query: 370 LSE 372 LS+ Sbjct: 381 LSD 383 >UniRef50_C5WEI1 Site-specific recombinase, phage integrase family n=9 Tax=Streptococcus RepID=C5WEI1_STRDG Length = 384 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 59/260 (22%), Positives = 106/260 (40%), Gaps = 19/260 (7%) Query: 107 IVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPL----SRE 162 +T+ + + + VF F + L NP I K +T + + Sbjct: 121 FITEKAKVFKNIKQIKSYTRKVFDFAIKMKLLKHNPMTEIIMPKRKKTRIENYWTVQELQ 180 Query: 163 EFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK-DRFTV 221 EF+ ++ + L+ + Y+G+R GEL AL W DID ++ T+ + ++L + D + Sbjct: 181 EFLAIVLQEEPYKHYALFRLLAYSGLRKGELYALKWADIDFQSETLSVNKSLGRLDGQAI 240 Query: 222 PKTQAG--TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPE 279 K+ + R I L I L+ ++ + K + + KQ F + Sbjct: 241 EKSTKNDFSVRKIKLDSETISILQEWKSINQKEKAQLAVAPL-----SIKQDFIFTYCTR 295 Query: 280 VSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQM 339 + + D+ I + I++ LR + RHT+A + G +P A ++ Sbjct: 296 TGSIEPLHADY-----INNVLSRIIRKHSLRKISPHGFRHTHATLMIEIGVDPVNTAKRL 350 Query: 340 GHADAQMVFQVYGKWMSENN 359 GHA +QM Y S NN Sbjct: 351 GHASSQMTLDTYSH--STNN 368 >UniRef50_A8LM37 Integrase family protein n=3 Tax=Rhodobacterales RepID=A8LM37_DINSH Length = 388 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/237 (24%), Positives = 91/237 (38%), Gaps = 41/237 (17%) Query: 118 VNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRL---IDACRNQ 174 N + L+ +F+ + G DNP KG+ E + LS E RL +DA NQ Sbjct: 165 ANRVLALLSKMFELAIRWGLRGDNPVKGVPRFAEEKRY-RWLSDNELDRLREALDAHPNQ 223 Query: 175 QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHL 234 +A N + + TG R GE+ W D DL G + P R HL Sbjct: 224 RAANAIRLQLLTGARTGEVLTSQWSDFDLDRGV-----------WVKPSHHTKQKRTEHL 272 Query: 235 IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVD 294 LS + + +GRT+ FVF + Sbjct: 273 P---------------LSAATVALLRSIAHGRTD--DSPFVFPGRKPG--------HPIK 307 Query: 295 SIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 +++ W + AGL+ + + +RHT+A +++G + + +GH + M Q Y Sbjct: 308 DLKRFWTSVTSTAGLKDYRLHDNRHTHASHLVSSGHSLPIVGRLLGHTNP-MTTQRY 363 >UniRef50_UPI0001BC466B phage integrase family protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC466B Length = 355 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 59/252 (23%), Positives = 111/252 (44%), Gaps = 43/252 (17%) Query: 125 LNAVFQFGVDNGYLADNPFKGISPL----KESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 L A+F + V + +NP + E + I P E+F+ LI+ + + Sbjct: 136 LTAIFNYAVRFHSMRENPCHRAGTIGKKRAEEKNIWTPEEFEKFVALIE--HKIPSYTAF 193 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL----AKDRFTVPKTQAGTNRVIHLIK 236 + +TG+R GEL AL +DID +N +++ ++ ++D T PKT+ G R + + Sbjct: 194 QILFWTGLRIGELLALSIKDIDFENKAIVVNKSYQRLGSRDVITAPKTEKG-KRTVDISD 252 Query: 237 PAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDH-FTVDS 295 ++ II+ + + +++P+ + R+ Y H F D Sbjct: 253 ELLE---------------IIEKYLKR-----------LYKPKKTDRLFPYTKHTFEND- 285 Query: 296 IRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 M + A+K AG++ + + RH++A + G + IA ++GH + Q + Y Sbjct: 286 ---MKEYAVK-AGVKKIRLHDLRHSHASFLFNNGIDIITIALRLGHEEVQTTLETYTHLY 341 Query: 356 SENNNAQVALLN 367 + N LLN Sbjct: 342 KKANTELRNLLN 353 >UniRef50_A1UH53 Phage integrase family protein n=3 Tax=root RepID=A1UH53_MYCSK Length = 379 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/261 (23%), Positives = 102/261 (39%), Gaps = 25/261 (9%) Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQA 176 TV T L V +G LA NP + +R L + RL+DA + + Sbjct: 137 TVRQVYTVLRQALDVAVRDGLLAANPASKVKRPGVARKEAKYLPAADVARLLDAAKGLRY 196 Query: 177 KNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA----KDRFTVPKTQAGTNRV- 231 + TG+R GE+ L W D+DL+ G + +R L+ K T PKT RV Sbjct: 197 YLGVVLMATTGLRRGEVAGLLWSDVDLEKGELTVRHTLSRVDGKLVLTEPKTDRSRRRVP 256 Query: 232 IHL-IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDH 290 +H + + R+Q RL+ +R+ G + + P Sbjct: 257 LHAGVVAQLKMHRTQQLQERLAAGD----QWRDTGAVLATEFGTLLDPR----------- 301 Query: 291 FTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQV 350 ++ + + A + G+ ++ RH+ A L +G + A+ +GH+ + + Sbjct: 302 ----NLLRTVEIAAAKVGIEDVGAHTMRHSAAVAWLESGVHIKAAADLLGHSSIAITGDL 357 Query: 351 YGKWMSENNNAQVALLNTQLS 371 YG E A V L T L Sbjct: 358 YGHTSDETARAAVDGLGTALG 378 >UniRef50_A8MGA1 Integrase family protein n=7 Tax=Clostridiaceae RepID=A8MGA1_ALKOO Length = 380 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 102/252 (40%), Gaps = 21/252 (8%) Query: 110 QPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLID 169 + G S T+ N LN+ F V + DNP + I K + + L+ EE +L D Sbjct: 120 KKGLSGSTLQNIYGTLNSAFNRAVKLQIMYDNPLRFIDRPKRDKFVASTLAVEEIGQLFD 179 Query: 170 ACRNQQAKNLWC-----VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD----RFT 220 A + + + + G+R GEL L W+ ID + I NL T Sbjct: 180 ALDTSKYNDYIMSLGLKIVLELGLRRGELAGLEWKYIDFNKQIITIANNLVDTYTEVSLT 239 Query: 221 VPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEV 280 PKT R +++ K + L+ L ++ H++E C FV E Sbjct: 240 TPKTDE--RRDLYVSKGLMQLLKQHKVLQTKNRMK-YRPHYKE-NEFNGNVCDFVMTWED 295 Query: 281 SARVKNYGDHFTVDSIRQMWDAAIKRAGL-RHRKSYQSRHTYACWSLTAGANPAFIANQM 339 V + +++TV ++ +K+ R+ + + RHT A L G + I ++ Sbjct: 296 GTYV--HPNYYTVK-----FNKLLKKVNFDRNIRFHDLRHTNATLLLQQGIDFKVIQTRL 348 Query: 340 GHADAQMVFQVY 351 GH+D +Y Sbjct: 349 GHSDINTTLNIY 360 >UniRef50_C7GF85 Phage integrase n=2 Tax=Clostridiales RepID=C7GF85_9FIRM Length = 398 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 106/252 (42%), Gaps = 27/252 (10%) Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDP--LSREEFIRLIDACRNQ 174 T+ ++ +F+ V N +A +P G+ K R + D L+ EE + ++A Sbjct: 131 TIRQTYISMGTMFKSAVMNDIIAKHPMNGVRYTKPVRAVDDIKYLTVEEQEKFLEAAERS 190 Query: 175 QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD------RFTVPKTQAGT 228 + + + TG+R EL L W+ ID K T+ + ++L R PKT+ + Sbjct: 191 HNYRQYALLLETGLRTAELIGLTWDAIDWKKRTLTVNKSLEYRHSRRYWRAGPPKTKK-S 249 Query: 229 NRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY--GRTEKQKCTFV-------FQPE 279 R I L + A L+S KE + EY RT ++KC + ++ Sbjct: 250 YRTIPLTERAYTILKSCYDEKDTRKESEMLSQILEYTDSRTGEKKCLVMRDLVFINWRTG 309 Query: 280 VSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQM 339 A+ +Y H + ++ D AG++ + RHTYA ++ G P + + Sbjct: 310 EPAKNSSYDTH-----LYKLCD----EAGIKRFCMHALRHTYATRAIERGVQPKVLQQLL 360 Query: 340 GHADAQMVFQVY 351 GHA + Y Sbjct: 361 GHASIKTTMDRY 372 >UniRef50_C7N3D0 Site-specific recombinase XerD n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N3D0_SLAHD Length = 443 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 26/203 (12%) Query: 182 VSVYTGVRPGELCALGWEDIDLK------NGTMMIRRNLA-KDRFTVPKTQAGTNRVIHL 234 + + TG+R GE+ L W D+ L G + + ++L+ + PKT+AG NR I+ Sbjct: 251 IGLATGMRLGEVHGLKWSDVVLAERGGEWGGVISVSKSLSFSGKLQSPKTKAG-NRSIN- 308 Query: 235 IKPAIDALRSQ-MTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV 293 IDA ++ ++ + ++ ++ RE G P+ + G ++ Sbjct: 309 ----IDAHTAERLSWWKRTQAEMLGKIGREQG------------PDTFICCNDEGGSGSI 352 Query: 294 DSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGK 353 + + W RAGL + ++ RHT A L AG + + N+MGHA+A + Y Sbjct: 353 PNFERWWREFRTRAGLPGLRYHELRHTQATQLLAAGVDVKTVQNRMGHANASITLDWYAH 412 Query: 354 WMSENNNAQVALLNTQLSEFAPT 376 EN+ AL+ + E P+ Sbjct: 413 AQPENDVKAAALMGAIMEEEPPS 435 >UniRef50_B4B3C5 Integrase family protein n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B3C5_9CHRO Length = 344 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 80/316 (25%), Positives = 121/316 (38%), Gaps = 67/316 (21%) Query: 59 SLNTYRAVIKNILSIIGEKNLASSINKEKLLEV------------RKELLT---GYQIPK 103 SL TYRA++K GE L S +KE L+E ++ +L+ GY P Sbjct: 63 SLETYRAMVKT-----GEVPL--SYSKESLIEALTLEYQQTPTNAKRNVLSKLRGYSQPI 115 Query: 104 SNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP------- 156 +N R A+ N + GV YL K +SPL ++ P Sbjct: 116 NN------ERQALAFYNTIVASVKSSSAGV---YLTA--LKQVSPLFKNIKRPRYQKPDV 164 Query: 157 DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK 216 +PLS ++ +++A L+ + TG RP EL L W + L G ++I L K Sbjct: 165 EPLSLDQLKAILEAVSGSHYGPLFNLLALTGARPSELLGLRWGKVFLDEGYILIDSQLTK 224 Query: 217 DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVF 276 D+ P + RV + P L FR + VF Sbjct: 225 DKKIGPTKNRKSRRV--FLSPKASEL------------------FRNLKPQKVDPDALVF 264 Query: 277 QPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIA 336 G ++ +R++W +K AGL K Y+ R T L G + A +A Sbjct: 265 -------TNTKGQPISLIGLREVWHKRLKNAGLPRTKLYKLRSTRLSQLLENGYSLAQVA 317 Query: 337 NQMGHADAQMVFQVYG 352 NQ GH+ ++ G Sbjct: 318 NQGGHSINTLITNYAG 333 >UniRef50_D1B1M5 Integrase family protein n=2 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B1M5_SULD5 Length = 346 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 3/136 (2%) Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQA 176 TV Y + L+ VF+F ++ + NP + K R I D S E+ LI+ Q Sbjct: 127 TVKEYRSTLSVVFKFAFNDDLIRKNPLTPVKSPKLPRRIVDVFSDEDRKLLIEHSSG-QL 185 Query: 177 KNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIK 236 NL Y+G+R GE+ L W++ID + + + K +PK R+I L+ Sbjct: 186 HNLIQFVFYSGLRAGEIIGLKWDNIDFDKNKIDVCMRVRKGTVDLPK--GDKIRLIDLLP 243 Query: 237 PAIDALRSQMTLTRLS 252 A AL Q LT LS Sbjct: 244 QAKQALLVQRQLTGLS 259 >UniRef50_C9LR41 Toxin-antitoxin system, toxin component, PIN family n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR41_9FIRM Length = 375 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 74/331 (22%), Positives = 135/331 (40%), Gaps = 45/331 (13%) Query: 36 QDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 Q++T+ + +++ KE EV T++ Y+ + KN +A + K+ ++ + Sbjct: 57 QNVTVNQYFNEWIIQKEQEVKATTVRLYKIIYKN--------QIAQIMGTRKIQDLERRE 108 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES--- 152 L +Q T + A+ + + + + V +G N + + +K+ Sbjct: 109 LVSFQSKLGQQYTTSTTKKAINI------IKQLLESAVIDGITTVNAAEYLPKIKKKSNE 162 Query: 153 ----RTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTM 208 TI L+ EE + + N C+ + TG+R GEL AL W DID KN + Sbjct: 163 RVARETIHRALTEEELKLFLKYAQTDWNYNAICLLLATGMRAGELGALYWSDIDYKNNVI 222 Query: 209 MIRRNLAKDR------FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRL-SKEHIIDVHF 261 I + + ++ T PKTQ + R I L + L Q + + E II ++ Sbjct: 223 HITKTVTVNQNGKSIIGTTPKTQK-SKRDIPLNAEIRNILSKQRNFISMWTAERIIKLN- 280 Query: 262 REYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTY 321 VF E+ V Y +SI+++ I+ ++ ++ R T+ Sbjct: 281 -----------DTVFNAEMQGIV--YAKTIN-NSIKRILK-RIEEIEIKPFTAHAFRSTF 325 Query: 322 ACWSLTAGANPAFIANQMGHADAQMVFQVYG 352 A ++ G + MGHA M +YG Sbjct: 326 ASMAVKKGMPLNVLKEIMGHASYSMTADLYG 356 >UniRef50_C2F0I9 Transposon integrase n=3 Tax=Firmicutes RepID=C2F0I9_LACRE Length = 410 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 74/274 (27%), Positives = 110/274 (40%), Gaps = 66/274 (24%) Query: 138 LADNPFKGISPLKESRTIP-DPLSREEFIRLIDACRNQQAKNLW----CVSVYTGVRPGE 192 ++DN + + ++ +IP L+ E+ ++ +N W V + TG+R GE Sbjct: 160 VSDNGLRELKRMRGIDSIPRKSLTIEQQNLFLNYLQNTDKYKHWYPTFAVMLGTGLRVGE 219 Query: 193 LCALGWEDIDLKNGTMMIRRNL--------AKDRFTV--PKTQAGTNRVIHLIKPAIDAL 242 L L WEDID KN + + L +K F + PKT+AG R I +IK +AL Sbjct: 220 LTGLRWEDIDFKNNLIKVNHTLVFYERSKSSKTGFGINTPKTKAGF-RTIPMIKTVREAL 278 Query: 243 RSQMTLTRLSKEHIIDVH----FREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 + Q T L KE I V FR+ F+F V+N G Sbjct: 279 QKQQTY--LQKEQIRSVDNIDGFRD----------FIFLNRF-GHVQNQGP--------- 316 Query: 299 MWDAAIKR-------AGLRHRKSYQS------------RHTYACWSLTAGANPAFIANQM 339 + A+KR A L S + RHT+ + +G N I N + Sbjct: 317 -LNKALKRIIRDCNFAELDKNPSINNDCLLPNFSCHVLRHTFTTRLVESGMNVKVIQNVL 375 Query: 340 GHADAQMVFQVYGKWMSENNNAQVALLNTQLSEF 373 GH+D Q +Y + N Q QL +F Sbjct: 376 GHSDIQTTLNIYADVTRDMKNQQF----NQLEDF 405 >UniRef50_A3IWY1 Tn554, transposase A n=2 Tax=Cyanothece sp. CCY0110 RepID=A3IWY1_9CHRO Length = 368 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 84/348 (24%), Positives = 141/348 (40%), Gaps = 61/348 (17%) Query: 38 LTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLT 97 L I+ + + L E + +++ Y +K + +K+L KE LE E + Sbjct: 24 LPIEPIQKYLHYLDSLERSPNTISAYAHNLKLYWEFLQDKHLNW---KEITLETLSEFIH 80 Query: 98 GYQIPKSNYIVTQP---GRSAVTVNNYMTNLNAVFQF--------GVDNGYLADNP---- 142 + P N I QP RS T+N+ +T + ++F G+D P Sbjct: 81 WLRNPNKNVISVQPQVSKRSEKTINHCLTTVCGFYEFYERLGEFEGIDADRYQVQPGRKY 140 Query: 143 -------FKG------ISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVR 189 KG + +KE +T P L+ E+ L++AC N + K L + +G+R Sbjct: 141 KSFLHHISKGKEVKTRLLKVKEPKTFPGCLTPEQVNTLVEACCNLRDKFLIRLLYESGLR 200 Query: 190 PGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLT 249 GE L ED+ N I+ + +AG R +H+ K L Sbjct: 201 IGEGLGLRHEDMVTGNNN-QIKVIPRVHNINYVRAKAGVERTVHVNK----------ELM 249 Query: 250 RLSKEHIIDVHFREYGRTEKQKCTFVF---QPEVSARVKNYGDHFTVDSIRQMWDAAIKR 306 + ++ID EY E C FVF + ++ N ++ TVDS+ +R Sbjct: 250 QWYSAYLID----EY--PEDIDCDFVFIVIKAPGKGKIGNPLNYKTVDSL-------FRR 296 Query: 307 AGLRHR---KSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 + R + RHT+A + AG + +++ ++GHAD Q Y Sbjct: 297 LSKKTRIEVTPHLLRHTHATELIRAGWDMSYVQKRLGHADIQTTVNTY 344 >UniRef50_A0AGT2 Complete genome n=7 Tax=Bacilli RepID=A0AGT2_LISW6 Length = 386 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 59/264 (22%), Positives = 110/264 (41%), Gaps = 36/264 (13%) Query: 114 SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLI----- 168 S +N + +L + V G + NP +S + + EEF +++ Sbjct: 146 SRTYINRILGHLRIILNRAVKEGLIERNPVDSVSYFPKENNKVEFWEIEEFQKVMAMIPE 205 Query: 169 DACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD-----RFTVPK 223 ++ +NQ K ++ + YTG+R GEL AL WE+++ + + + + L F+ PK Sbjct: 206 NSIQNQHRKIIYEMLFYTGLRIGELQALSWENVNFEKNQITVEKTLIYQGKNDWYFSTPK 265 Query: 224 TQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSAR 283 T + R I + K L+ L R+ + EY + F P S Sbjct: 266 TNK-SYRTISIGKTLSKRLKKWQELQRM-------IGNFEY----MSQLDGTFTPSYSF- 312 Query: 284 VKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHAD 343 ++ DS R +AG+ K + RH++ + P I ++GHA+ Sbjct: 313 -----SNWLKDSAR--------KAGVIPIKLHALRHSHVALLIDQNIQPLVIQERLGHAN 359 Query: 344 AQMVFQVYGKWMSENNNAQVALLN 367 Q+ YG +++++ V +L+ Sbjct: 360 IQITLGTYGHLYAKSDSQVVDVLD 383 >UniRef50_C6LG06 Prophage LambdaBa02, site-specific recombinase, phage integrase family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LG06_9FIRM Length = 429 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 77/292 (26%), Positives = 123/292 (42%), Gaps = 52/292 (17%) Query: 105 NYIVTQPGRSAVTVNNYMTNLNAVFQFGVDN-GYLADNPFKGISPLK------ESRTIPD 157 N++ TQ G + TV+ ++ L+ F + V+ YL NP I K E+R I Sbjct: 119 NHLKTQ-GYAKSTVSGIISTLSGAFNYAVEPMHYLQYNPCNNIRYPKFRDTKTEARYIIS 177 Query: 158 PLSREEFIRLIDACRNQQAKNL-WCVSVYTGVRPGELCALGWEDIDLKNGTMMI-----R 211 P E+F R+I ++ L + YTG+R E AL W+DIDL N T+ + + Sbjct: 178 P---EDFQRIIARFDSRSQYYLPLMIGYYTGLRISEAFALTWDDIDLDNRTLSVNKITLK 234 Query: 212 RNLAKD-----------------RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKE 254 RN D F PKT AG+ R I AL+ ++ Sbjct: 235 RNYGVDVRTVLQNKGKKEEKSAWYFGTPKT-AGSERTIKFGDALYHALKYAKKTQLENRL 293 Query: 255 HIIDVHFREYGRTEK-QKCTFVFQPEVSAR-------------VKNYGDHFTVDSIRQMW 300 H + + Y + EK +K +F+ + R V+ G + + DS + + Sbjct: 294 HYGEYYTDIYLKPEKDEKGDEIFRLIETERSIPCALNRANMICVRENGQYVSTDSFK--Y 351 Query: 301 DAAIKRAGLRHRKSYQS-RHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 A + L+ +Y S RHT+A + GA+ + ++GH + Q Q Y Sbjct: 352 CARVIHYDLKIAFNYHSLRHTHATTLIENGADIKDVQERLGHDNIQTTMQTY 403 >UniRef50_Q3AB72 Tyrosine recombinase XerC n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AB72_CARHZ Length = 297 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 42/241 (17%) Query: 108 VTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRL 167 + + RS T M L + ++F G++ +NP + K +T+P+ L+ +E ++ Sbjct: 57 ILRKNRSRRTAARKMVALRSFYRFLKRCGFIKENPALSLEIPKIPKTLPEVLTVDEVFKV 116 Query: 168 IDACRNQQA---KNLWCVSVY--TGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVP 222 I+ N +N + ++ G+R GE+ L D+DL G + R K R Sbjct: 117 IEGQENSTPTGLRNRALLELFYGAGLRIGEIAGLTLNDLDLTQGYV---RVTGKGR---- 169 Query: 223 KTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSA 282 R++ L K A+D+L+ + E GR F+P+ Sbjct: 170 -----RQRIVPLGKYALDSLKLYL----------------EAGRP-------AFKPKSEK 201 Query: 283 RVKN-YGDHFTVDSIRQMWDAAIKRAGL-RHRKSYQSRHTYACWSLTAGANPAFIANQMG 340 N G TV IR + +K+AGL R + RH+YA L GA+ + +G Sbjct: 202 LFLNQQGAGLTVRGIRYLISQIVKKAGLNRKITPHTFRHSYATHLLEGGADIRAVQELLG 261 Query: 341 H 341 H Sbjct: 262 H 262 >UniRef50_D0GPE3 Site-specific recombinase, phage integrase family n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GPE3_9FUSO Length = 323 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 53/244 (21%), Positives = 107/244 (43%), Gaps = 24/244 (9%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREE----FIRL 167 G S TV + MT + + + + + K P + + ++EE F + Sbjct: 78 GLSRKTVKDIMTIIKISINYAIRENIIKEKSLKYKIPKTDKINEINTFNQEEQSLLFKYI 137 Query: 168 IDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAG 227 ++ L +S+ G+R GELC L W+DIDL+N +++ + L + F V K G Sbjct: 138 ASNLTSKSVGILLAMSI--GLRIGELCGLKWKDIDLQNEILIVNKTLQRIYFRVKK--GG 193 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 + +I + + ++ R + LS+ V+F + + + + F+ E K Y Sbjct: 194 KSEIIISVPKSKNSYR----IIPLSRNL---VNFLKILQIDDKSNYFLSNNEKYIEPKTY 246 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 R+ + +++ +R K + RHT+A ++ +G + ++ +GHA Sbjct: 247 ---------RRYYYKILEKLKIRKLKFHSLRHTFATTAIESGIDYKTVSEILGHASVNTT 297 Query: 348 FQVY 351 ++Y Sbjct: 298 LELY 301 >UniRef50_Q6ALN4 Related to pore-forming cytotoxin integrase n=1 Tax=Desulfotalea psychrophila RepID=Q6ALN4_DESPS Length = 407 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 9/97 (9%) Query: 294 DSIRQM-WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYG 352 D +R + W A L++R+ Y++RHT+A W+L G P ++A +GH D MV++ YG Sbjct: 309 DKLRSVVWVEAFAGLELQYRRMYETRHTFASWALALGETPEWVAKTLGHVDTSMVYRTYG 368 Query: 353 KWMSENNNAQVALLNTQLS--------EFAPTMPHNE 381 +++ + + Q S +F + HNE Sbjct: 369 RYIPNLKSLDGFSVEKQFSGTRVEGKEDFGHSFGHNE 405 >UniRef50_Q3Z6H5 Site-specific recombinase, phage integrase family n=1 Tax=Dehalococcoides ethenogenes 195 RepID=Q3Z6H5_DEHE1 Length = 386 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 62/284 (21%), Positives = 120/284 (42%), Gaps = 16/284 (5%) Query: 70 ILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVF 129 + S I K++ ++ ++E++ + L K ++ G S TV L+ Sbjct: 88 LYSYISTKHIIPTLGNIPIVELKPQHLQHLYADKQSF-----GLSNRTVQIIHVVLHKAL 142 Query: 130 QFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVR 189 + V G L+ N + + K R ++ + L++ + L+ S++TG+R Sbjct: 143 KNAVKTGLLSRNIAEAVDAPKIQRHEMQVMNESDMQVLLEKAKETPYYALFYTSLFTGMR 202 Query: 190 PGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLT 249 E AL W DIDL + + R++ + A + I +P R Q+ L+ Sbjct: 203 RAECLALRWSDIDLILCQVYVLRSMQYVQ------DADLGKRITFKEPKTSKSRRQIALS 256 Query: 250 RLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY--GDHFTVDSIRQMWDAAIKRA 307 S I+ H+++ ++E +K + S V ++ G +S+ W +R Sbjct: 257 P-SNVIILREHYQD--QSELRKTLNLPGLTDSDLVFSHYDGSPLLPNSVTHAWIKLARRC 313 Query: 308 GLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 GL + + +RHT+A L G +P + ++GH Q+ Y Sbjct: 314 GLNGIRLHDARHTHASLLLKQGVHPKIVQERLGHGSIQITLDTY 357 >UniRef50_B6ALG3 Integrase n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6ALG3_9BACT Length = 388 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 70/308 (22%), Positives = 124/308 (40%), Gaps = 55/308 (17%) Query: 42 ELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQI 101 ELAE+++ + + +T R +K L G+K LA ++ + EV +++ Sbjct: 72 ELAEQYIRYADLHHKRKGDDTPR--LKWWLDAFGDK-LALTLKPYMVEEVMEKM------ 122 Query: 102 PKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSR 161 + G T+ + L AV+ V N + NP + K ++ L+ Sbjct: 123 -------NKEGYKPATIARCLVVLKAVYNRAVKNEIIERNPIARVFAPKFDNSLVRYLTT 175 Query: 162 EEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTV 221 ++ RL +A ++ + V+++TG R GEL L WED+D GT+ +R Sbjct: 176 DQEERLFEAL-PERLHPIVTVALHTGCRQGELLKLVWEDVDFNAGTIFLR---------- 224 Query: 222 PKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVS 281 T++G +R + L + +V GR F Sbjct: 225 -DTKSGDSRRV------------------LMNSKVQEVLLALPGRDTPGAPVF------- 258 Query: 282 ARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGH 341 G ++R+ +D AIK+AGL + + RHT+A GAN + +GH Sbjct: 259 --TDTLGGPMEGRNLRRDFDRAIKKAGLAPFRFHDLRHTFASRLAMMGANDRTLQTLLGH 316 Query: 342 ADAQMVFQ 349 +M+ + Sbjct: 317 KSQRMILR 324 >UniRef50_C1SNQ2 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNQ2_9BACT Length = 342 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 59/262 (22%), Positives = 101/262 (38%), Gaps = 41/262 (15%) Query: 110 QPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLID 169 + G + ++N + N+ A F V+ LA NP G LK + +P L+ ++ + + Sbjct: 112 KAGYAKTSINIDIRNIKAAFSKAVEWEKLAQNPLNGFKQLKIDKNLPKFLTFDDLDKFAN 171 Query: 170 ACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTN 229 + ++ + V TG R E L W+DID + IR KT+ Sbjct: 172 ILGDNPLRHAFFFYVLTGCRRSEALVLTWDDIDFTRMVVHIR-----------KTKNHEA 220 Query: 230 RVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGD 289 R I P D+L + G T KQ F ++K G Sbjct: 221 RDI----PICDSLYELLN-----------------GITPKQGYLF------PGKIK--GT 251 Query: 290 HFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQ 349 H D++ + AG + + RHT+A +G I + +GH+D + + Sbjct: 252 HLDKDTMTHNIKDCLTEAGFPDMRLHDLRHTFASLLALSGETLQTIRDLLGHSDIRTT-E 310 Query: 350 VYGKWMSENNNAQVALLNTQLS 371 +Y +++ A V L +S Sbjct: 311 IYAHLTADHLKAAVNKLKVNVS 332 >UniRef50_C1XF66 Site-specific recombinase XerD n=4 Tax=Meiothermus RepID=C1XF66_MEIRU Length = 374 Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 112/264 (42%), Gaps = 32/264 (12%) Query: 114 SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI--PDPLSREEFIRLIDAC 171 S T + L A + V G L NP + P T+ P +RE+ + A Sbjct: 128 SPSTRRHLYQFLRAALRDAVRVGLLEANPMDAVDP-PTGGTVRPPRAWNREQVSAFLAAA 186 Query: 172 RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRV 231 + + ++ V + TG+R GE AL W+D + + IR L K R P G++ Sbjct: 187 QGHRLYPMFYVMLTTGLRIGEAMALRWQD--WQGEKLWIRHTLTKQRTLGPTKTLGSSAP 244 Query: 232 IHLIKPAIDALRSQMTL----TRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 I+L L +Q L TR ++E + ++ +F EV + Sbjct: 245 IYL------DLATQTILSEHRTRQAEERATAKRWLDH--------DLIFPSEVGTPLSYR 290 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 T ++ + A + R GL + RHTY +L AG +P +A+++ H D + Sbjct: 291 NVMRTFQALTE--QAKVPRIGL-----HGLRHTYTSMALQAGLSPKQVADRLRHKDPALT 343 Query: 348 FQVYGKWMSENNNAQVAL-LNTQL 370 ++Y + + E + Q AL L+T L Sbjct: 344 LRIY-QHLQEEDRRQAALNLDTLL 366 >UniRef50_Q7MRS4 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MRS4_WOLSU Length = 416 Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 89/348 (25%), Positives = 145/348 (41%), Gaps = 64/348 (18%) Query: 43 LAEKFLALKET--EVAKTSLNTYRAVIKNILSIIGEKNLASSINKE-KL-LEVRKELLTG 98 A+ FLA +E + T T R +L G+K++ S E KL L+ K TG Sbjct: 91 FADIFLAARENFHDYQNTQYRTSR-----VLEDFGKKSITSITKLEIKLWLQALKHKATG 145 Query: 99 YQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP-- 156 + K++ + Y+ +F+ +D ++ N I +E R + Sbjct: 146 IPLSKNSKL------------KYLGIFRGIFELAIDAQLISHNLCDEIRIQQERRNLNKI 193 Query: 157 DPLSREEFIRLI--DACRNQQAKNL---WCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 +P S EE LI CR + + L ++ G+ P E+ L DIDLKN + I+ Sbjct: 194 EPFSVEETCLLIQRSQCREKYGQLLHEYLGIAFNMGMSPAEILGLQLSDIDLKNRILRIQ 253 Query: 212 RNLAKDRFTVPKTQAGTNRVIHLIK---PAIDAL-------RSQMTLTRLSKEHIIDVHF 261 RN+ K + KT +R++ ++ P I+ L RS + ++ D+ Sbjct: 254 RNITKGKIKETKT-TYRDRILPILDGALPYIETLDFQAKKKRSIWLFSGDDGNYLPDI-- 310 Query: 262 REYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTY 321 E R EK+ + + R+K T R + D G+ +R +RHT+ Sbjct: 311 -EIIRGEKEII------KENLRIKK-----TTKWYRLLLD-----CGIPYRDLKNTRHTF 353 Query: 322 ACWSL-TAGANPAFIANQMGHADAQMVFQVYGKW-----MSENNNAQV 363 A +L T +AN +GH QM+ Y KW MS N N ++ Sbjct: 354 AVRALETKSLTFQELANFLGHGSLQMILNHYAKWIGGKAMSANKNIRL 401 >UniRef50_C7H2F1 Prophage LambdaCh01, site-specific recombinase, phage integrase family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2F1_9FIRM Length = 475 Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 34/256 (13%) Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQA 176 TV +Y L++VF V G + +NP K K L ++ RL++A ++ A Sbjct: 213 TVQHYHRMLSSVFTKAVQWGLVPENPCKRAEAPKAEEIDVQALEEKDVARLLEALQDAPA 272 Query: 177 K--NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL-----AKDRFTVPKTQAGTN 229 + + ++++TG R E+C L W D+DL GT+ I RN+ FT PKT+ + Sbjct: 273 QFSVITQLALFTGARRSEICGLRWCDVDLDAGTLSIERNVQYIPGKGTVFTTPKTKR-SR 331 Query: 230 RVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK--CTFVFQPEVSARVKNY 287 R I + + LR +R++ R E+ + +V + E++ ++ Sbjct: 332 RCIKIGPECVQLLRE----------------YRQHQRAERLRMGTAWVRRVEIAGKMVEN 375 Query: 288 GDHFT------VD--SIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQM 339 FT +D ++ + + L + RHT A + A ++ ++ Sbjct: 376 DLLFTKWNGAPIDPKTVTTWFPGFLAAHDLPPVHFHSLRHTNASLLIAAHVPVTAVSGRL 435 Query: 340 GHADAQMVFQVYGKWM 355 GHA +Y ++ Sbjct: 436 GHAKTSTTTDIYAGFI 451 >UniRef50_A5ZQX5 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZQX5_9FIRM Length = 407 Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 81/342 (23%), Positives = 147/342 (42%), Gaps = 52/342 (15%) Query: 37 DLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 +LT+ E F++ K+ T N Y++ KN ++ S++ K+ E+++ Sbjct: 69 NLTLNEFFRLFMSTKKNIRDSTRCN-YKSYWKNAIA-------PSALGIMKISEIKQ--- 117 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISP-LKESRTI 155 + + + + G S T+ Y L+ Q VD+ + NP KG + + + Sbjct: 118 --IHVKRLYADLLEKGYSPGTIRAYHIILSECLQAAVDSDMIRKNPAKGSRKGIDKEVSR 175 Query: 156 PDPLSREEFIRLIDACRNQQAKN----LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 L+ EE +++ +N + L ++ TG+R GEL L W+DIDL+ + +R Sbjct: 176 KRALTIEEQETMLEFTKNSNSYKIHYPLIVFALSTGLRVGELGGLLWDDIDLEKNMIHVR 235 Query: 212 RNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY----GRT 267 R L V + GT H+ +A + LT+ +K+ ++ REY G+ Sbjct: 236 RQL------VYRNLDGTGCKFHIQPLKTEAGERDIPLTKTAKKALMKQ--REYDLLLGKR 287 Query: 268 EKQKCT-----FVF--------QPEV-SARVKNYGDHFTVDSIRQMWDAAIKRAG----L 309 K++ FVF P+V + ++N + ++Q A K G L Sbjct: 288 AKEQPVAGLKNFVFLNHQGNQLAPQVLDSALRNIIKAYNKKELKQ----ADKEHGEPFLL 343 Query: 310 RHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 H ++ RHT+ + +G + + MGHAD M + Y Sbjct: 344 PHISAHILRHTFCTRAAESGVDVKSLQYIMGHADITMTMERY 385 >UniRef50_D1XEM4 Integrase family protein n=1 Tax=Streptomyces sp. ACTE RepID=D1XEM4_9ACTO Length = 435 Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 20/199 (10%) Query: 157 DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK 216 +PL+ +E + + A RN + L+ +++ G+R GEL L W+D+DL NGT IRR L + Sbjct: 210 EPLTADEARQFLAAVRNDRLFALYELALRAGLRKGELLGLQWKDLDLHNGTASIRRTLQR 269 Query: 217 DRF----TVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKC 272 + +P + R I L I + + + ++ + +++ G Sbjct: 270 TQTGGLTALPTKTRASERRIALPSECIHSFKEHRAVQEGERKAAAE-GWKDNG------- 321 Query: 273 TFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANP 332 VF+ + G ++ + + ++RAGLR + + RH+ A L G Sbjct: 322 -LVFR-------TSAGGPIDPANLNRSFHTLLERAGLRRIRFHDLRHSTATLLLEQGVEL 373 Query: 333 AFIANQMGHADAQMVFQVY 351 I +GHA + VY Sbjct: 374 VVIKELLGHAHIGVTATVY 392 >UniRef50_C0GET2 Integrase family protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GET2_9FIRM Length = 386 Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 78/337 (23%), Positives = 137/337 (40%), Gaps = 64/337 (18%) Query: 39 TIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLT 97 T E E +LA K+ + ++ +TY + +I S +G L I + ++ E Sbjct: 69 TFTEWFEIWLASKKNNIKPSTYDTYETFWRVHIKSALGHMKL-DKIQPHHVQKLLDEKQG 127 Query: 98 GYQIPKS-NYIVTQPGRSAVTVNNYMTNL--NAVFQFGVDNGYLADNPFKGISPLKESRT 154 G P+S YI T T+N + + + F + L + P + +KE + Sbjct: 128 GELSPRSVRYIHT-------TINTALKSALKQRIISFNPADAELLELPKN--TKIKEVK- 177 Query: 155 IPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL 214 PL++++ I + + + +S+ G+R GE+ L WE+ID + T+ I+ NL Sbjct: 178 ---PLTQDDVKAFIATAKEDKFSVAYILSLALGMRKGEVLGLQWENIDFEQKTLTIKNNL 234 Query: 215 AKDR-----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 + + T PKT A +NRV+ L + LT LS E+GR + Sbjct: 235 TRVKGKGLVLTTPKT-ASSNRVV---------LLPEKILTLLS----------EHGRKQ- 273 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSI---------------RQMWDAAIKRAGLRHRKS 314 + E++ Y + D++ + + +++AGL Sbjct: 274 -----AVEREIAKASGKYSEAEGFDNMVFTYEEGKPVCPRYFERKFKKVLEKAGLSQAGL 328 Query: 315 YQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 + RH+Y AG N I +GH+ A VY Sbjct: 329 HSLRHSYGTLQNEAGVNMKAIQATLGHSKASFTMSVY 365 >UniRef50_P96629 ICEBs1 integrase n=1 Tax=Bacillus subtilis RepID=INT_BACSU Length = 368 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 106/261 (40%), Gaps = 44/261 (16%) Query: 108 VTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRL 167 + + G S +VNN MT+L+ +F V L NP + L +R EEF + Sbjct: 118 LMETGLSNKSVNNIMTSLSKIFDTAVHEEILKRNPCDNVKRLPLTRKKMKFWRPEEFKKF 177 Query: 168 IDACRNQQA--KNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD------RF 219 I Q K + V+ TG+R GE+ AL W+DID +++ ++ K +F Sbjct: 178 ISLIPQDQLLFKTFYTVAFLTGLRCGEMLALQWKDID----KILLEIDVHKSCTWLDGQF 233 Query: 220 --TVPKTQAGTNRV------IHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 T PKT+ RV + L++ +A + L H D + +Y T +K Sbjct: 234 VVTTPKTKNSIRRVSINKKLLKLLERWKEA--QEELFNELGIRHSHDTYIFQYKDTPSRK 291 Query: 272 CTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGAN 331 F S ++K +F DS L + + RH++ + G + Sbjct: 292 DIF------SRKIK----YFCKDS------------DLTPIRLHDFRHSHVALLIHQGED 329 Query: 332 PAFIANQMGHADAQMVFQVYG 352 I ++GH + VYG Sbjct: 330 YITIKERLGHGSVKTTIDVYG 350 >UniRef50_D2LXB3 Integrase family protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LXB3_BACS4 Length = 324 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%) Query: 19 AKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETE-VAKTSLNTYRAVIKNILSIIGEK 77 K+F S ++K + + +L++ E+ E+FL K++E ++K +L Y K +L + Sbjct: 11 GKRFTDSTRVKK--QNKINLSLTEMYERFLLFKKSEGLSKQTLFDYDVHFKYLLDFLERD 68 Query: 78 NLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGY 137 +A + E LE R NY++ G A TVN + + A ++ + G+ Sbjct: 69 LMADEMTTEIFLEYR------------NYMLNDLGLKASTVNIRLRTIRAFLRYSYEEGW 116 Query: 138 LADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQ-----QAKNLWCVSVYTGVRPGE 192 + + P+K + D LS E L+ + + K L+ + + R E Sbjct: 117 IDQPIHEKFKPVKAPQKEVDALSPREIKLLLSQINDDYYAGFRDKVLFFTMLDSMARISE 176 Query: 193 LCALGWEDIDLKNGTMMIRRNLAK---DRFTVP 222 L A+ E++DL+NG + + + K DRF VP Sbjct: 177 LLAIKRENVDLRNGVIKLEADGTKTKVDRF-VP 208 >UniRef50_Q1Q549 Similar to site-specific tyrosine recombinase n=2 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q549_9BACT Length = 351 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 69/318 (21%), Positives = 133/318 (41%), Gaps = 54/318 (16%) Query: 31 FGEARQDL-TIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLL 89 F + DL T K+L E+F+ +V+ +Y K++LS G+ +L L Sbjct: 48 FDKYEGDLKTFKDLMERFMKEHAPKVSLNMQKSYTTSAKHLLSFFGDLSL---------L 98 Query: 90 EVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNG-YLADNPFKGISP 148 + + + Y++ + N G+ T+N + L+ F V ++ DNP IS Sbjct: 99 AITPKKVNDYKVSRKNL-----GKKPATINKELAMLSKAFCLAVKEWEWIRDNPASKISK 153 Query: 149 LKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTM 208 KE+ LS +E RL++ + ++ ++TG+R EL +L W+ +DL + Sbjct: 154 EKEANERDRWLSDDEEKRLLENS-PEWLSDIIVFDLHTGLRQDELLSLTWDRVDLFRKVI 212 Query: 209 MIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTE 268 +I+ +++ G R I L + ++D L + + L Sbjct: 213 IIQ-----------ESKNGKPRTIPLNQISLDILMEKTKVRSL----------------- 244 Query: 269 KQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTA 328 K FVF V ++ ++ + +D A ++A +++ + RH +A Sbjct: 245 --KGDFVFPSSVMTKMNRR-------NLVRAFDIAKEKASIQNFHFHDVRHCFATRLAQR 295 Query: 329 GANPAFIANQMGHADAQM 346 G + I+ +GH + M Sbjct: 296 GVDIYRISKLLGHLNITM 313 >UniRef50_C9AZK9 Phage integrase n=6 Tax=Enterococcus RepID=C9AZK9_ENTCA Length = 410 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 107/260 (41%), Gaps = 31/260 (11%) Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPD-----PL-SREEFIRLIDACR 172 +N + N++FQ+ + NP +G+ K + I + P ++ E + + + Sbjct: 130 SNLIGMTNSIFQYAKSLRLIRRNPMEGVIRPKRQKQIDEEKYTAPFYTKAEVLYFLQIAK 189 Query: 173 N--QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-----KDRFTVPKTQ 225 ++ + +TG+R GEL AL W+DID K GT+ +++ L K F PKT+ Sbjct: 190 KYPDPLYPMFHILTFTGLRKGELLALRWKDIDFKRGTLSVKQTLTTVEDWKLAFQTPKTE 249 Query: 226 AGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK-CTFVFQPEVSARV 284 R I + + R Q L + F + GR + +F E + Sbjct: 250 KSL-RTISIDNQTLSIFR-QCILKQ-------KAFFLKTGRKPVENGAQLLFTTEENKP- 299 Query: 285 KNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADA 344 + +D + +K L+H + RHT+ +GA+ + ++GH D Sbjct: 300 ------YYLDFLNHNLTKILKENKLKHMTVHGFRHTHCSLLFESGASIKEVQVRLGHTDV 353 Query: 345 QMVFQVYGKWMSENNNAQVA 364 + +Y +SE + A Sbjct: 354 RTTMDIYAH-VSEQKKEETA 372 >UniRef50_B1I2A9 Phage integrase family protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2A9_DESAP Length = 300 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 94/235 (40%), Gaps = 41/235 (17%) Query: 115 AVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC--- 171 A ++ + + F++ + Y+ +P + I P KE +P L EE L+ A Sbjct: 72 AASLRRKIHCFRSFFRYLAEQEYIPGDPMRKIRPPKEPDRVPIYLKEEELKWLLTAPGHL 131 Query: 172 ---RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGT 228 + + K + + Y G+R EL L W+D+DL GT+ +R + Sbjct: 132 GGPYHLRDKLILHLLAYCGLRRSELLRLDWDDVDLGAGTLRVR------------GKGKR 179 Query: 229 NRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYG 288 R+I LI P + + + TRL E+ RE GR K T +F K Y Sbjct: 180 ERLIPLI-PELQQILWEYLQTRLPLENRALFLGREGGRMNKDALTRLF--------KRYV 230 Query: 289 DHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHAD 343 +D A I ++ RH++A L G + I MGHAD Sbjct: 231 RMAGLDP------AVI--------TPHKLRHSFATLLLEKGTDVFTIQELMGHAD 271 >UniRef50_D0AFR5 Predicted protein n=1 Tax=Enterococcus faecium TC 6 RepID=D0AFR5_ENTFC Length = 378 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 30/222 (13%) Query: 35 RQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKE 94 + DLT EL E++L + + +V +++ ++ I I E + S IN L + ++ Sbjct: 66 KPDLTFHELVEEWLVIYKRQVKESTYYPTNNILNTIKKKIPETYIVSGINTVDLNNIFED 125 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKG--ISPLKES 152 ++ Y+ SN V S + + LN +F + + GY+ NP I +ES Sbjct: 126 MI--YKDDLSNKYV-----SVIK-----SKLNLLFSYAMKKGYVEKNPINEVVIDYKRES 173 Query: 153 RTIPDP---LSREEFIRLID--ACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLK--- 204 +TI L +E+ RL+D N++ L+ TG+RPGE AL +D+ + Sbjct: 174 KTIKIKDKFLEDDEYKRLVDFTTSHNKRYSLLFQWLYLTGMRPGEAIALSKDDVHITNNN 233 Query: 205 -----NGTMMIRRNLAKD--RFTVPKTQAGTNRVIHLIKPAI 239 NGTMM R D + KT AG R I L K AI Sbjct: 234 ASVVINGTMMYRERSIADMKKSDSTKTAAGM-REIDLPKKAI 274 >UniRef50_C0GWH6 Integrase family protein n=3 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GWH6_9DELT Length = 394 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 115/263 (43%), Gaps = 53/263 (20%) Query: 87 KLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGI 146 K+ E+ ++ + +Q SN++ + G TVN YM + +F + P + I Sbjct: 140 KMSEITRDDVQQFQ---SNFL--RAGCKPGTVNRYMALVKYIFNLAEKWDVIEKTPARHI 194 Query: 147 SPLKESRTIPDPLSREEFIRLIDA---CRNQQAKNLWCVSVYTGVRPGELCALGWEDIDL 203 S L+++ LS EE RL+ C++Q ++ + + TG R E+ L W+++DL Sbjct: 195 SRLEDNNCKERYLSSEETKRLLGELKNCKSQVVPDIIELLILTGARKSEVVNLPWQELDL 254 Query: 204 KNG--TMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHF 261 K G T+ RN AK R T+P +Q ALR + Sbjct: 255 KQGLWTIPPERNKAKTRKTIPLSQG--------------ALRI--------------LEK 286 Query: 262 REYGRTEKQKCTFVF-QPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHT 320 R++ +E +VF P+ +K++ H T WD K AG+ + + RH Sbjct: 287 RKHNGSE-----YVFPNPKTGGPIKHF--HNT-------WDRVRKNAGIPDVRIHDLRHN 332 Query: 321 YACWSLTAGANPAFIANQMGHAD 343 +A + +G + + +GH++ Sbjct: 333 FASLLVNSGRSLYEVQKLLGHSN 355 >UniRef50_Q8ERR7 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ERR7_OCEIH Length = 378 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/275 (21%), Positives = 113/275 (41%), Gaps = 44/275 (16%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC 171 G S + L+ F V ++ NP +P + S+++ + ++ Sbjct: 129 GYSTSYIRKMHQMLHLSFAQAVKWRKISYNPVVNTTPPRVQTKQVSIWSKDQVKQFLETS 188 Query: 172 RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR-----FTVPKTQA 226 ++ L+ +++YTG+R GEL L W DI+++ + I RNL + FT PKT Sbjct: 189 NLERLYILFLLAIYTGMRKGELLGLKWSDINMEKECIHIHRNLCYIQNQGYFFTTPKTVR 248 Query: 227 GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKN 286 T RVI P + Q+ + EKQ+C + E++ + Sbjct: 249 ST-RVI----PISSLISDQLQCIK-----------------EKQQC----EKELAG--PS 280 Query: 287 YGDHFTV-----------DSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFI 335 Y D+ V ++ ++++ IK A + + + RHT+A ++ G + + Sbjct: 281 YEDNDLVICTALGKVQDPRNVTRVFERCIKNANVPKIRFHDLRHTHASILISEGVDIVKV 340 Query: 336 ANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 +++MGH + +Y + +N + L Sbjct: 341 SSRMGHTSPKTTLDIYAHVVPNTDNEVATIFEKSL 375 >UniRef50_C7VU19 Phage integrase n=3 Tax=Enterococcus faecalis RepID=C7VU19_ENTFA Length = 397 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 80/344 (23%), Positives = 132/344 (38%), Gaps = 54/344 (15%) Query: 37 DLTIKELAEKFLALKETEVA-KTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 ++T KEL E+F+ +V T + T RA+ + L G+K + K + VR Sbjct: 65 NITFKELYEEFIEQYRLKVKPSTVMITRRAIEDHALEYFGDKKI-------KDISVRFCT 117 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 + + Y R AV + Q+G+ + +NP + P+K Sbjct: 118 QVNRRWIRDGYKQAYYFRRAVA---------QILQYGIQQELINENPMRKTEPIKRKEID 168 Query: 156 PDPLSRE--------EFIRLIDACR---NQQAKNLWCVSVYTGVRPGELCALGWEDIDLK 204 ++ E E + +D C NQ+ + + + YTG R E+ AL W DID Sbjct: 169 EHLVATETISVYTPKELAQFLDCCHKHGNQKIETYFRLLSYTGGRKSEILALEWNDIDFI 228 Query: 205 NGTMMIRRNLAK-------DRFTVPKTQAGTN---RVIHLIKPAIDALRSQMTLTRLSKE 254 + + I + LA+ + V A TN R I + + L+S T + Sbjct: 229 SNKLTISKTLAEVESDPNSKKTRVASQSAKTNAGKRTISIDLETMSVLQSWKTRQQFE-- 286 Query: 255 HIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKS 314 F G K VF P + G + +D I + L+ R + Sbjct: 287 ------FTVLGIKATNKHQLVF-PNKENQFCRPG------QVNDWYDMIIAKYNLQKRIT 333 Query: 315 -YQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 ++ R T+ A N I ++GH D++M QVY + E Sbjct: 334 IHEFRKTHVSLCAMANMNLEDIMYRVGHKDSKMTRQVYNYFYPE 377 >UniRef50_A6GBT9 Phage integrase n=2 Tax=Plesiocystis pacifica SIR-1 RepID=A6GBT9_9DELT Length = 531 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/317 (21%), Positives = 141/317 (44%), Gaps = 22/317 (6%) Query: 36 QDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 +D+ ++ +F+A E+ VA + N I E++L+ + L + Sbjct: 160 EDVIFEDFVPRFMAFCESPVAGRRGANSTGELSNKRGTI-EQHLSPYFGEMPLRRIGARQ 218 Query: 96 LTGYQIPKSNYIVTQPGR--SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 + Y K+ + G+ SA T+ N++ L + + V + + + I P ++ Sbjct: 219 VDAYVCAKAQERSKRTGKPLSASTIANHLAVLRRMLK--VAHRWELIDRVPDIQPPRKG- 275 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 T+ + LS+ E L++ + ++L+ +++ TG+R GEL L D+DL NG + +RR Sbjct: 276 TVDNYLSKREAQALLEHA-DPLTRDLFMLALRTGMRLGELRELRTGDVDLANGRIQVRRQ 334 Query: 214 LAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCT 273 ++ P + G R + + A++ LR + L L ++ ++ + Y + Sbjct: 335 RTQEGEVTP-PKYGRKRTVQVPADALEVLRKR--LAGLGRKELVFSKPKGYKAAHR---- 387 Query: 274 FVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGL-RHRKSYQSRHTYACWSLTAGANP 332 R G+ ++ + + A AG+ R + RHT+A ++ AG Sbjct: 388 -------GERAAKGGEPWSHKDLFNAVNRARAGAGIERSVGVHTLRHTFATHAVAAGVPL 440 Query: 333 AFIANQMGHADAQMVFQ 349 + ++ Q+GH+D + + Sbjct: 441 SLVSRQLGHSDVRTTMR 457 >UniRef50_Q7A4J3 Int protein n=24 Tax=Bacilli RepID=Q7A4J3_STAAN Length = 390 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 43/259 (16%) Query: 118 VNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDP---------LSREEFIRLI 168 V++ +T+ N +F++ D + P +GI K+ ++ + L ++E + + Sbjct: 127 VDSIVTSTNMIFKYAYDMKLIRILPSEGIKRPKKKVSVEELEDTEIHKKFLEKDELFQFL 186 Query: 169 DACRN----QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR-------NLAKD 217 + +N Q + ++ YTG+R GEL AL W DID +N T+ I + N + Sbjct: 187 EIAKNHHSPQNSFEVFYTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPNNNKKQY 246 Query: 218 RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQ 277 + PKT++ ++ ++D + +L K + +DV T K + +V Sbjct: 247 QILTPKTESSIGKI------SVDP-----HVIKLLKNYKVDVQ-----DTWKNEL-YVDN 289 Query: 278 PEVSARVKNYGDHFTVDSIRQMWDAAI-KRAGLRHRK--SYQSRHTYACWSLTAGANPAF 334 V V Y V Q+W AI K+ + +++ ++ RHT+ + AG + Sbjct: 290 NFVFTDVNGYP---LVIKKLQLWIKAILKKTNITNKQISTHSFRHTHCALLIEAGVHIKE 346 Query: 335 IANQMGHADAQMVFQVYGK 353 I ++ H D +Y K Sbjct: 347 IQERLRHKDINTTMNIYAK 365 >UniRef50_C8WP09 Integrase family protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WP09_EGGLE Length = 438 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/271 (22%), Positives = 106/271 (39%), Gaps = 22/271 (8%) Query: 108 VTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRL 167 + + G + TVN+ + + + + I K R +P LS EE L Sbjct: 134 LVEDGYCSETVNHMLWTVRDTLELASFRMLRPPLDLRRIRAPKHDRPLPRALSAEEKNAL 193 Query: 168 IDA--CRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL-----AKDRFT 220 + A C + ++++ G+R GE+CAL W ++DL T+ I + + Sbjct: 194 LAALPCIRGPLDAIVRLALFAGLRCGEICALRWANVDLNRRTVRITSAIGTLPSSNGYLK 253 Query: 221 VPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEV 280 PK+ AG + P D L + R +E R+ G V + Sbjct: 254 GPKSPAGVRAL-----PIADGLMEGLERRRAEQE----ARCRDAGVPFTDDIFVVGDIDG 304 Query: 281 SARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMG 340 + V Y + +R K GL ++ RHT+A + +G NP ++N +G Sbjct: 305 AFMVPRYANQLFRTFVRTFGIGGGK-CGL-----HRLRHTFATELIMSGVNPKTVSNWLG 358 Query: 341 HADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 H D ++Y EN A V +N ++ Sbjct: 359 HTDPSFTLRIYVSSSPENLRASVDAVNEVMA 389 >UniRef50_Q1D2W1 Site-specific recombinase, phage integrase family n=7 Tax=Myxococcales RepID=Q1D2W1_MYXXD Length = 334 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/263 (25%), Positives = 104/263 (39%), Gaps = 40/263 (15%) Query: 114 SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP-DPLSREEFIRLIDACR 172 S T+NN +T L+ + ++G + P + P + P D LS EE +L+ A Sbjct: 90 SLKTINNVLTVLHKLLTLAEEHGVIRQAPR--VKPFGKLPKPPFDFLSFEEADQLL-AVA 146 Query: 173 NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVI 232 + + L V++ TG+R GEL L W D+ L G + +RR + + +PK G R + Sbjct: 147 EPEWRTLLRVAIKTGLRQGELIGLRWHDLTLTRGLLHVRRTIWRGIEGLPK--GGRERTV 204 Query: 233 HLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFT 292 L +DAL + H GR FVF + G T Sbjct: 205 DLPASVVDAL---------------NAHRHRRGR-------FVF-------CQEDGQPLT 235 Query: 293 VDSIRQMWDAAIKRAGLRHRKS----YQSRHTYACWSLTAGANPAFIANQMGHADAQMVF 348 + A++ AG+ + RHTY G I +GHA +M Sbjct: 236 KGKMAAPLGRALRAAGITREVGQIGWHDLRHTYGSHLAMRGIPLKVIQELIGHATIEMTN 295 Query: 349 QVYGKWMSENNNAQVALLNTQLS 371 + Y + VA+L+ L+ Sbjct: 296 R-YAHLSPDTRREAVAVLDRPLA 317 >UniRef50_B7GVF6 Tyrosine recombinase xerC n=1 Tax=Acinetobacter baumannii AB307-0294 RepID=B7GVF6_ACIB3 Length = 398 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 101/242 (41%), Gaps = 50/242 (20%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLID-- 169 G + ++N L+ +F +++ + NP +S KE+ I L+ +E RL+D Sbjct: 161 GLTNASINRVRALLSVMFNMAINHDLIQVNPVSKVSKFKENNQIERYLNAQEIKRLMDVL 220 Query: 170 -ACRNQQAKNLWCVSV-----YTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPK 223 A NL V++ TGVR E + W D+DL G ++ N Sbjct: 221 NAPHQHGIDNLIIVAIVKFLLLTGVRKREAMDMKWTDVDLTTGVWLLGEN---------- 270 Query: 224 TQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSAR 283 ++G R I L + A+ L S L ++H F+F ++ + Sbjct: 271 -KSGKARRITLNQDALAILHS------LPQQH-----------------AFIFANPMTGQ 306 Query: 284 VKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHAD 343 N +R+ + + +K A +R+ + + RH +A ++ +G + + + +GHA Sbjct: 307 PFN--------DMRKTFQSIMKAASIRNIRIHDLRHNFASIAVNSGQSLYVVQHLLGHAS 358 Query: 344 AQ 345 Q Sbjct: 359 PQ 360 >UniRef50_A6NXL1 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NXL1_9BACE Length = 397 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 82/361 (22%), Positives = 140/361 (38%), Gaps = 52/361 (14%) Query: 18 YAKQFPSSRNL---EKFGEARQDL------TIKELAEKFLALKETEVAKTSLNTYRA-VI 67 Y + P ++N +F + +D+ T+ E ++ ++A +L YR Sbjct: 37 YFQTVPEAKNWIEEARFADQHEDIFVPTETTVDEWFGFWIENIVGDLAPNTLRNYRERYA 96 Query: 68 KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNA 127 NI +IG ++S K + +K LL I + T+ + Sbjct: 97 HNIQPVIGRMAISSV----KPMHCKKVLLQMDAI-----------YAGSTIRQAYITMGT 141 Query: 128 VFQFGVDNGYLADNPFKGISPLKESRTIPDP--LSREEFIRLIDACRNQQAKNLWCVSVY 185 +F+ N +A +P G+ K R + D L+R+E + A + + + + Sbjct: 142 MFKAAKMNDVIAKHPMDGVRYTKPVRAVDDIKFLTRQEQSLFLQAAKKSHNYYQYALILE 201 Query: 186 TGVRPGELCALGWEDIDLK------NGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAI 239 TG+R GEL L W+ +DL+ N T+ R L R PKTQ + R I L A Sbjct: 202 TGLRTGELIGLTWDAVDLEKRTLTVNKTLEFRHGLHTWRAGPPKTQH-SYRTIPLTDRAC 260 Query: 240 DALRSQMTLTRLSKEHIIDVHFREY-----GRTEK---QKCTFV-FQPEVSARVKNYGDH 290 + L+S KE + EY G K + F+ ++ A+ +Y H Sbjct: 261 EILQSVWNSRDTRKESPLLSQTLEYIDRRTGSIAKLVMRDLVFINWRTGEPAKNSSYDTH 320 Query: 291 FTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQV 350 AG++ + RHTYA ++ +G P + +GHA + Sbjct: 321 LY---------KICDEAGIKRFCMHALRHTYATRAIESGIQPKVLQKLLGHASIKTTMDW 371 Query: 351 Y 351 Y Sbjct: 372 Y 372 >UniRef50_Q0C629 Tyrosine recombinase XerD n=2 Tax=Hyphomonadaceae RepID=Q0C629_HYPNA Length = 309 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 103/245 (42%), Gaps = 28/245 (11%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC 171 G + T ++ + F+F G D+P + R +PD LSREE RLI+AC Sbjct: 62 GMAPSTQARKLSAVRRFFRFLFQEGDRKDDPTARLDGPSPEREVPDVLSREEVGRLIEAC 121 Query: 172 RNQQAKNLWCVS--VY-TGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGT 228 N K L C+ +Y G+R EL L ++ + + ++ + + + G Sbjct: 122 GND--KRLKCLVELLYGAGLRATELVTLRVGNLPRRKAGQWMSADI------IIRGKGGK 173 Query: 229 NRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYG 288 +R+ L + A+ AL + + S + ++ G FVF +R K Sbjct: 174 DRLCPLGRAALIALSEWLEVREASLPDNPLMRSKQEG--------FVF----PSRGKE-- 219 Query: 289 DHFTVDSIRQMWDAAIKRAGLRHRKSYQS--RHTYACWSLTAGANPAFIANQMGHADAQM 346 H T + QM + AGLR + Y RH YA L GA+ + +GHAD Sbjct: 220 GHLTRRRLGQMLEDLAGEAGLRSERVYPHALRHAYATHLLQGGADLRVVQTLLGHADIAT 279 Query: 347 VFQVY 351 Q+Y Sbjct: 280 T-QIY 283 >UniRef50_D2L4K8 Integrase family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L4K8_9DELT Length = 395 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 35/208 (16%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP-------DPLSREEF 164 G+S TV + + + +FGV G L D+P P K++ ++P + L +E Sbjct: 150 GKSPQTVKHVLALFKRLVRFGVKKG-LCDSP----DPRKQTISMPRVDNETTEDLDADEL 204 Query: 165 IRLIDACRNQ---QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTV 221 RL+ A ++ QA N ++++TG+R GEL L W D+D + G + IR Sbjct: 205 ARLVQAIEDEPNIQAANFMRLAMFTGMRRGELFKLEWRDVDFERGFIHIRH--------- 255 Query: 222 PKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTF-VFQPEV 280 PK G ++ I P DA R+ + S H+ + + G+ KQ+ T V + Sbjct: 256 PK--GGKSQKI----PLNDAARAVLA----SHPHVENSPYVFPGQGGKQRVTIQVASNRI 305 Query: 281 SARVKNYGDHFTVDSIRQMWDAAIKRAG 308 AR D + +R ++ + + +G Sbjct: 306 KARASLPADFRPLHGLRHLFASTLASSG 333 >UniRef50_O55248 Integrase n=4 Tax=root RepID=O55248_9VIRU Length = 372 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 70/270 (25%), Positives = 109/270 (40%), Gaps = 43/270 (15%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDP---LSREEFIRLI 168 G + T+ N L+ V YL+ NP G + + D L+ EF RL Sbjct: 138 GHAPKTLRNKYGFLSGALNAAVPR-YLSTNPASGRRLPRGNAEDDDEIRMLTHAEFDRLR 196 Query: 169 DACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR----NLAKDRFTVPKT 224 DA K + V TG+R GE+ AL +DL+ T+ +R+ + A PKT Sbjct: 197 DAV-TPHWKLMVQFMVSTGLRWGEVSALQPRHVDLETSTIRVRQAWKYSSAGYVLGPPKT 255 Query: 225 QAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARV 284 + RS+ T +DV R R + FVF V Sbjct: 256 K-----------------RSRRT---------VDVPARLLERLDLSN-EFVFVNTDGGPV 288 Query: 285 KNYGDHFTVDSIRQMWDAAIKRAGLRHRKS-YQSRHTYACWSLTAGANPAFIANQMGHAD 343 + G +R++W+ A+++AGL R + + RHTYA W LT G ++ Q+GH Sbjct: 289 RYPG------FLRRVWNPAVEKAGLVPRPTPHDLRHTYASWQLTGGTPVTIVSRQLGHES 342 Query: 344 AQMVFQVYGKWMSENNNAQVALLNTQLSEF 373 Q+ Y ++ ++ L +F Sbjct: 343 IQITVDTYTDVDRTSSRVAAEFMDGLLGDF 372 >UniRef50_C4XTG1 Site-specific recombinase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XTG1_DESMR Length = 409 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 84/363 (23%), Positives = 146/363 (40%), Gaps = 77/363 (21%) Query: 38 LTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLT 97 LT ELA ++L + + + Y + K +L + + A+S+ + + R LL Sbjct: 96 LTFGELARRYLDWAKRNKSSWKEDEY-LLAKRVLPLFAHRP-ATSLTRTDTEQFRDALLD 153 Query: 98 GYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGV------DNGYL---ADNPFKGIS- 147 G S +T+ +++ + V+ + D G++ NP GI Sbjct: 154 AG------------GLSPMTIKHHLVVIRRVYNWAASTPVADDPGHMLFEGRNPVSGIRM 201 Query: 148 PLKESRTIPDPLSREEFIRLIDAC--RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKN 205 PL ++ I L+REE RL++A R + ++ +++ TG+R E+ L W+D+DL Sbjct: 202 PLVDNERI-RFLTREEADRLLEAAGERLPEMHDIILLALLTGMRRQEILGLMWQDVDL-- 258 Query: 206 GTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY- 264 NR+I + PA ++T + S++ +D Sbjct: 259 ----------------------VNRIISI--PA------RLTRAKRSRKAFLDEETAAML 288 Query: 265 -GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGL-------RHRKSYQ 316 R E + FVF V R DH T + +DA + GL +H+ + Sbjct: 289 QARREHAQSPFVFPGAVDGRRDP--DHVT-----RQFDALVNGIGLNNGVTDPKHKVVFH 341 Query: 317 S-RHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAP 375 + RHT+A W AGA+ + GH Q Y M A +L++ + S Sbjct: 342 TLRHTFASWLAQAGADIHHLMELTGHKSIS-TMQRYAHLMPGKTRAIASLVSRRASPAPK 400 Query: 376 TMP 378 +P Sbjct: 401 GVP 403 >UniRef50_UPI0001C35B62 integrase family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35B62 Length = 406 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 105/250 (42%), Gaps = 23/250 (9%) Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDP--LSREEFIRLIDACRNQ 174 T+ + + + V N +A +P G+ K R + D L+ EE + ++A Sbjct: 131 TIRQAYITMGTMLKSAVMNDIIAKHPMNGVRYTKPVRAVDDIKYLTVEEQEKFLEAAARS 190 Query: 175 QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD------RFTVPKTQAGT 228 + + + TG+R E+ L W+ ID KN T+ + ++L R PKTQ + Sbjct: 191 HNYRQYALLLETGLRTAEMIGLTWDAIDWKNRTLTVNKSLEYRHSQGYWRAGPPKTQK-S 249 Query: 229 NRVIHLIKPAIDALRS--QMTLTRLSKEHIIDVHFREYGRTEKQKC----TFVFQPEVSA 282 R I L A L+S +R S E + V RT + KC VF V+ Sbjct: 250 YRTIPLTDKAYSILKSCYDEKDSRKSSETLSQVLEYIDSRTGENKCLIMRDLVF---VNW 306 Query: 283 RVKNYGDHFTVDS-IRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGH 341 R + + D+ + ++ D AG++ + RHTYA ++ G P + +GH Sbjct: 307 RTGEPAKNSSYDTHLYKLCD----EAGIKRFCMHALRHTYATRAIERGVQPKVLQQLLGH 362 Query: 342 ADAQMVFQVY 351 A + Y Sbjct: 363 ASIKTTMDRY 372 >UniRef50_C2VI23 Site-specific recombinase, phage integrase n=3 Tax=Bacillus cereus group RepID=C2VI23_BACCE Length = 392 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 20/242 (8%) Query: 132 GVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSV---YTGV 188 VD+ + N F I+ E +T+ + + EE I A + + + + + +TG+ Sbjct: 157 AVDDELIPRNRFNKITIPNEEKTVENFFTAEELNEFIAAAKKHENITNYSIILLLAFTGL 216 Query: 189 RPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTL 248 R GE L W++I+ + T+ + R PKT+ + R I + I+ L++ T Sbjct: 217 RKGEALGLQWKNINFEEKTLTVERTRDNKGTRTPKTK-NSFRTILIDDTLINQLKAYRTW 275 Query: 249 TRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAG 308 + +K +H Q F+F S G T + + + +K Sbjct: 276 CKKTKLS-FGLHL--------QDDDFIFISYQS------GTPITDNPLMYSFQRILKHTT 320 Query: 309 LRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNT 368 L+ + RHT+A ++ IA+++G+ QM+F +YG E VA +T Sbjct: 321 LKKITPHGLRHTHATLLISQRIPVKVIADRLGNT-PQMIFDIYGHSFKELEEESVAAFST 379 Query: 369 QL 370 L Sbjct: 380 SL 381 >UniRef50_C3XFN5 Phage integrase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XFN5_9HELI Length = 370 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/355 (19%), Positives = 145/355 (40%), Gaps = 53/355 (14%) Query: 21 QFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLA 80 Q+ R+++ E + TI E K L L+ K++L Y V K K++ Sbjct: 53 QYKRERDMQ---EQKHIDTITEYGYKVLELERENCKKSTLIRYENVFK--------KHIV 101 Query: 81 SSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGV-DNGYLA 139 SSI +L E +++ K +++ + A+ V L +F + + D + Sbjct: 102 SSIGNMRLQEFSPKIMKVIFKDKFSHLSFKNKGIAICV------LRKIFDYAICDEIFTD 155 Query: 140 DNPFKGISPLK----ESRTIPDPLSREEFIRLIDACRNQQAKN----LWCVSVYTGVRPG 191 NP + I K E + + DPL+ + + ++ + + N + +++ TG+R Sbjct: 156 SNPMQIIKHKKKEYAEPQRLNDPLNLNQVMDILKHLKTKDMDNRLKMYFQLALLTGMRVN 215 Query: 192 ELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRL 251 E+ AL + DI+++ T+ + ++L + T+ T+ + I P + +L T Sbjct: 216 EILALKYSDINVEKNTIQVYKSLQQGTNTISTTKTENGKRNIQILPFLKSLLKDTLDTNG 275 Query: 252 SKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRH 311 S ++F + G + ++R+ + ++ + Sbjct: 276 S--------------------GYIF-------LNKRGGFISDSTMRKYFKKILQELNIGD 308 Query: 312 RKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALL 366 R Y +RHT+A + G + A+++ +GH D Y + + ++ + L Sbjct: 309 RTLYSTRHTFASIMIAYGEDIAWVSKMLGHKDIATTCNFYVEHIRDDKTRGLCFL 363 >UniRef50_C0EDT0 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDT0_9CLOT Length = 462 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/247 (23%), Positives = 100/247 (40%), Gaps = 22/247 (8%) Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC 171 G +A T+N++ L+++ V + NP + P K R L ++ +LI Sbjct: 204 GLAAKTINSHHRLLSSMLNTAVQWQIIFSNPCDRVKPPKLERKEARYLDEKQTAQLITCL 263 Query: 172 RNQ--QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN--LAKDRFTVPKTQA- 226 + + Q + + + +YTG+R GELC L W D D+++ + I+R DR T Sbjct: 264 QREPEQYQTMVLLLIYTGMRRGELCGLEWPDFDMEHKLLYIQRESLYLPDRGIFEDTTKT 323 Query: 227 -GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVK 285 + RVI L A+ L I F + K +V ++ Sbjct: 324 YSSTRVIKLSDEAVKLL--------------IQHKFAQNAERAKLGDAWVDTGKIFTTCT 369 Query: 286 NYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQ 345 G D++ + +++ L + RHT A + G N +A ++GHAD Sbjct: 370 --GKPIHPDTLTTWFHKFVQKNDLPPVSVHSLRHTNATLLIANGVNLTTVAGRLGHADTG 427 Query: 346 MVFQVYG 352 +VY Sbjct: 428 TTTKVYA 434 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76168 Putative lambdoid prophage Qin defective integra... 523 e-147 UniRef50_UPI0001826473 putative integrase n=1 Tax=Enterobacter c... 407 e-112 UniRef50_B6XGP6 Putative uncharacterized protein n=1 Tax=Provide... 357 6e-97 UniRef50_A8GE25 Integrase family protein n=18 Tax=Enterobacteria... 356 9e-97 UniRef50_A2P3A8 Integrase n=3 Tax=Vibrionaceae RepID=A2P3A8_VIBCH 329 1e-88 UniRef50_D0Z3D7 Putative integrase n=1 Tax=Photobacterium damsel... 313 5e-84 UniRef50_P76056 Putative lambdoid prophage Rac integrase n=30 Ta... 312 2e-83 UniRef50_A7MYL9 Putative uncharacterized protein n=3 Tax=Vibrio ... 287 6e-76 UniRef50_A8T0M8 Putative integrase n=1 Tax=Vibrio sp. AND4 RepID... 259 9e-68 UniRef50_UPI0001BC493F putative integrase n=1 Tax=Neisseria muco... 251 3e-65 UniRef50_A9KZM7 Integrase family protein n=4 Tax=Gammaproteobact... 250 5e-65 UniRef50_C9RBE5 Integrase family protein n=1 Tax=Ammonifex degen... 247 6e-64 UniRef50_Q2RHJ2 Phage integrase n=3 Tax=Firmicutes RepID=Q2RHJ2_... 245 2e-63 UniRef50_Q1AUQ4 Phage integrase n=3 Tax=Rubrobacter xylanophilus... 243 7e-63 UniRef50_C1XYN2 Site-specific recombinase XerD n=1 Tax=Meiotherm... 241 4e-62 UniRef50_B7DTQ3 Integrase family protein n=2 Tax=Bacillales RepI... 240 6e-62 UniRef50_B0KAZ5 Phage integrase family protein n=3 Tax=Thermoana... 239 1e-61 UniRef50_A4AD26 Prophage integrase n=5 Tax=Gammaproteobacteria R... 239 1e-61 UniRef50_D1CFY4 Integrase family protein n=1 Tax=Thermobaculum t... 238 4e-61 UniRef50_C1D584 Phage integrase n=1 Tax=Laribacter hongkongensis... 236 7e-61 UniRef50_C8VWS4 Integrase family protein n=1 Tax=Desulfotomaculu... 235 2e-60 UniRef50_A6GR01 Phage integrase n=3 Tax=Proteobacteria RepID=A6G... 234 6e-60 UniRef50_B8I354 Integrase family protein n=1 Tax=Clostridium cel... 232 2e-59 UniRef50_C6MG53 Integrase family protein n=1 Tax=Nitrosomonas sp... 232 2e-59 UniRef50_B1VP49 Putative phage integrase n=1 Tax=Streptomyces gr... 231 3e-59 UniRef50_B9MR26 Integrase family protein n=2 Tax=Anaerocellum th... 231 4e-59 UniRef50_A8HM00 Phage integrase n=5 Tax=Proteobacteria RepID=A8H... 230 6e-59 UniRef50_B7DTD1 Integrase family protein n=2 Tax=Alicyclobacillu... 229 1e-58 UniRef50_Q1ZMG0 Phage integrase n=2 Tax=Photobacterium RepID=Q1Z... 229 1e-58 UniRef50_B0KSD4 Integrase family protein n=1 Tax=Pseudomonas put... 228 2e-58 UniRef50_B9MQ70 Integrase family protein n=1 Tax=Anaerocellum th... 228 3e-58 UniRef50_C1SH28 Site-specific recombinase XerD n=1 Tax=Denitrovi... 227 4e-58 UniRef50_D1C8V1 Integrase family protein n=1 Tax=Sphaerobacter t... 227 5e-58 UniRef50_C1SH90 Site-specific recombinase XerD n=2 Tax=Denitrovi... 227 5e-58 UniRef50_B0PGN2 Putative uncharacterized protein n=2 Tax=Clostri... 227 6e-58 UniRef50_A9BYB6 Integrase family protein n=2 Tax=Comamonadaceae ... 226 1e-57 UniRef50_C6DJ77 Integrase family protein n=4 Tax=Enterobacteriac... 226 1e-57 UniRef50_Q3Z840 Site-specific recombinase, phage integrase famil... 226 1e-57 UniRef50_A3D4Z5 Phage integrase family protein n=3 Tax=Shewanell... 225 2e-57 UniRef50_A8L4Q7 Integrase family protein n=9 Tax=Actinomycetales... 225 2e-57 UniRef50_A4XMZ7 Phage integrase family protein n=3 Tax=Clostridi... 225 3e-57 UniRef50_D2S5L4 Integrase family protein n=1 Tax=Geodermatophilu... 225 3e-57 UniRef50_C1CZ59 Putative Tyrosine recombinase xerC-like protein ... 223 6e-57 UniRef50_B1RM53 Phage integrase n=4 Tax=Clostridium RepID=B1RM53... 223 7e-57 UniRef50_Q31DR3 Tyrosine recombinase n=1 Tax=Thiomicrospira crun... 223 8e-57 UniRef50_D2LSV7 Integrase family protein n=1 Tax=Bacillus cellul... 223 1e-56 UniRef50_C2RY84 Prophage LambdaBa04, site-specific recombinase, ... 221 3e-56 UniRef50_D2S8K7 Integrase family protein n=1 Tax=Geodermatophilu... 220 6e-56 UniRef50_B1B8Q2 Phage integrase n=1 Tax=Clostridium botulinum C ... 220 7e-56 UniRef50_A3JCU8 Phage integrase n=2 Tax=Marinobacter sp. ELB17 R... 220 7e-56 UniRef50_C3L682 Prophage LambdaBa04, site-specific recombinase, ... 219 1e-55 UniRef50_B7IY65 DNA integration/recombination/invertion protein ... 219 1e-55 UniRef50_A8MGP9 Integrase family protein n=1 Tax=Alkaliphilus or... 219 1e-55 UniRef50_A5WDD8 Phage integrase family protein n=6 Tax=Proteobac... 219 2e-55 UniRef50_A7N7U1 Putative uncharacterized protein n=1 Tax=Vibrio ... 219 2e-55 UniRef50_C4TVA5 Bacteriophage integrase n=3 Tax=Enterobacteriace... 219 2e-55 UniRef50_Q1QXU7 Phage integrase n=4 Tax=root RepID=Q1QXU7_CHRSD 218 2e-55 UniRef50_C0QHJ7 Phage integrase family protein n=1 Tax=Desulfoba... 218 3e-55 UniRef50_C6QSP6 Integrase family protein n=1 Tax=Geobacillus sp.... 217 7e-55 UniRef50_B9KXE0 Transposase n=1 Tax=Thermomicrobium roseum DSM 5... 216 1e-54 UniRef50_C1SH59 Site-specific recombinase XerD n=1 Tax=Denitrovi... 216 1e-54 UniRef50_B4BIA4 Integrase family protein n=2 Tax=Geobacillus Rep... 214 4e-54 UniRef50_Q2T7M7 Bbp50 n=13 Tax=root RepID=Q2T7M7_BURTA 214 6e-54 UniRef50_A4G7G1 Putative integrase n=1 Tax=Herminiimonas arsenic... 213 1e-53 UniRef50_C1IAU4 Phage integrase n=1 Tax=Clostridium sp. 7_2_43FA... 213 1e-53 UniRef50_C5T6H4 Integrase family protein n=2 Tax=Burkholderiales... 213 1e-53 UniRef50_B9MP49 Integrase family protein n=1 Tax=Anaerocellum th... 213 1e-53 UniRef50_A8UWI5 Phage integrase n=1 Tax=Hydrogenivirga sp. 128-5... 212 1e-53 UniRef50_Q12GK7 Phage integrase n=11 Tax=Proteobacteria RepID=Q1... 212 2e-53 UniRef50_D0J3Y8 Phage integrase n=5 Tax=Burkholderiales RepID=D0... 211 3e-53 UniRef50_UPI0001694281 DNA integration/recombination/invertion p... 211 3e-53 UniRef50_B8D1P6 Phage integrase family protein n=1 Tax=Halotherm... 211 4e-53 UniRef50_A0KWT4 Phage integrase family protein n=5 Tax=Gammaprot... 211 4e-53 UniRef50_Q7N1I7 Similar to bacteriophage integrase n=8 Tax=Enter... 211 5e-53 UniRef50_D2BJR0 Site-specific recombinase, phage integrase famil... 210 7e-53 UniRef50_B4V6V4 Phage integrase n=6 Tax=Streptomyces RepID=B4V6V... 210 7e-53 UniRef50_C3EB65 DNA integration/recombination/invertion protein ... 210 8e-53 UniRef50_A8FW51 Putative pore-forming cytotoxin integrase n=1 Ta... 210 9e-53 UniRef50_C8X726 Integrase family protein n=1 Tax=Nakamurella mul... 209 1e-52 UniRef50_Q2JGT4 Phage integrase n=4 Tax=Frankia RepID=Q2JGT4_FRASC 209 1e-52 UniRef50_Q0AUP6 Phage integrase n=1 Tax=Syntrophomonas wolfei su... 209 1e-52 UniRef50_A7VZ12 Putative uncharacterized protein n=2 Tax=Clostri... 209 1e-52 UniRef50_B0KAT2 Phage integrase family protein n=7 Tax=Clostridi... 209 2e-52 UniRef50_B0VUJ0 Putative integrase n=1 Tax=Acinetobacter baumann... 209 2e-52 UniRef50_Q3ABG2 Prophage LambdaCh01, site-specific recombinase, ... 208 3e-52 UniRef50_C9RA80 Integrase family protein n=1 Tax=Ammonifex degen... 207 6e-52 UniRef50_C8WVH7 Integrase family protein n=1 Tax=Alicyclobacillu... 206 9e-52 UniRef50_C4FP65 Putative uncharacterized protein n=1 Tax=Veillon... 206 2e-51 UniRef50_A4XMV7 Phage integrase family protein n=2 Tax=Caldicell... 206 2e-51 UniRef50_A4ILC8 DNA integration/recombination/invertion protein ... 206 2e-51 UniRef50_D1BL69 Integrase family protein n=1 Tax=Veillonella par... 205 2e-51 UniRef50_Q859R3 ORF39 n=1 Tax=Thermus phage IN93 RepID=Q859R3_9VIRU 205 2e-51 UniRef50_Q3Z6H5 Site-specific recombinase, phage integrase famil... 205 2e-51 UniRef50_C6UV22 Site-specific recombinase, phage integrase famil... 205 2e-51 UniRef50_C9R814 Integrase family protein n=2 Tax=Ammonifex degen... 205 3e-51 UniRef50_D1PRY2 Site-specific recombinase, phage integrase famil... 204 4e-51 UniRef50_B7AAK4 Integrase family protein n=3 Tax=Thermus aquatic... 204 4e-51 UniRef50_D1XEM4 Integrase family protein n=1 Tax=Streptomyces sp... 202 1e-50 UniRef50_C4LFZ6 Integrase family protein n=1 Tax=Tolumonas auens... 202 2e-50 UniRef50_Q8R890 Tyrosine recombinase xerC-like n=5 Tax=Clostridi... 202 2e-50 UniRef50_C2Z776 Prophage LambdaBa04, site-specific recombinase, ... 201 3e-50 UniRef50_UPI0001C37D82 integrase family protein n=1 Tax=Ruminoco... 201 3e-50 UniRef50_A8ZS80 Integrase family protein n=1 Tax=Desulfococcus o... 201 3e-50 UniRef50_A7B6B9 Putative uncharacterized protein n=2 Tax=Clostri... 201 5e-50 UniRef50_C5UVC6 Site-specific recombinase, phage integrase famil... 200 6e-50 UniRef50_C0EE56 Putative uncharacterized protein n=1 Tax=Clostri... 200 7e-50 UniRef50_A4J0G7 Phage integrase family protein n=1 Tax=Desulfoto... 200 7e-50 UniRef50_C7GF85 Phage integrase n=2 Tax=Clostridiales RepID=C7GF... 200 8e-50 UniRef50_A3DCS0 Phage integrase n=6 Tax=Bacteria RepID=A3DCS0_CLOTH 200 8e-50 UniRef50_UPI0001C37419 Phage integrase n=1 Tax=Ruminococcus flav... 200 9e-50 UniRef50_Q87MU5 Putative pore-forming cytotoxin integrase n=2 Ta... 199 1e-49 UniRef50_A6NXL1 Putative uncharacterized protein n=2 Tax=Bacteri... 199 1e-49 UniRef50_A9VJZ8 Integrase family protein n=15 Tax=Bacillus cereu... 199 1e-49 UniRef50_Q8ERR7 Hypothetical conserved protein n=1 Tax=Oceanobac... 199 2e-49 UniRef50_Q98MQ9 Bacteriophage integrase n=5 Tax=Rhizobiales RepI... 199 2e-49 UniRef50_C0GET2 Integrase family protein n=1 Tax=Dethiobacter al... 198 2e-49 UniRef50_Q82ZU2 Site-specific recombinase, phage integrase famil... 198 3e-49 UniRef50_A7VEW1 Putative uncharacterized protein n=4 Tax=Clostri... 198 3e-49 UniRef50_C7N6A1 Site-specific recombinase XerD n=1 Tax=Slackia h... 197 7e-49 UniRef50_C3K9Z5 Putative phage integrase n=1 Tax=Pseudomonas flu... 196 9e-49 UniRef50_A4J1T6 Phage integrase family protein n=1 Tax=Desulfoto... 196 1e-48 UniRef50_B9KYK7 Putative integrase n=1 Tax=Thermomicrobium roseu... 196 2e-48 UniRef50_A6FXR9 Phage integrase n=1 Tax=Plesiocystis pacifica SI... 195 2e-48 UniRef50_UPI0001C375B8 hypothetical protein RflaF_20511 n=1 Tax=... 195 2e-48 UniRef50_C1XF66 Site-specific recombinase XerD n=4 Tax=Meiotherm... 195 2e-48 UniRef50_A1WV14 Phage integrase family protein n=1 Tax=Halorhodo... 195 3e-48 UniRef50_C0EDT0 Putative uncharacterized protein n=2 Tax=Clostri... 194 4e-48 UniRef50_A1TPL3 Phage integrase family protein n=1 Tax=Acidovora... 194 4e-48 UniRef50_A8LF05 Integrase family protein n=1 Tax=Frankia sp. EAN... 194 5e-48 UniRef50_C2E2T4 Bacteriophage integrase n=5 Tax=Lactobacillus Re... 194 5e-48 UniRef50_A1HTM7 Phage integrase family protein n=1 Tax=Thermosin... 194 5e-48 UniRef50_UPI0001C35B62 integrase family protein n=1 Tax=Clostrid... 194 5e-48 UniRef50_Q65EQ4 Lambda integrase-like, N-terminal,DNA breaking-r... 193 1e-47 UniRef50_C2NSI2 DNA integration/recombination/invertion protein ... 192 1e-47 UniRef50_A0JQR3 Phage integrase n=3 Tax=Lactobacillus salivarius... 192 1e-47 UniRef50_C0EC03 Putative uncharacterized protein n=1 Tax=Clostri... 192 2e-47 UniRef50_C1CUZ9 Putative phage integrase n=1 Tax=Deinococcus des... 191 3e-47 UniRef50_C2VI23 Site-specific recombinase, phage integrase n=3 T... 191 3e-47 UniRef50_C9AMW3 Phage integrase n=8 Tax=Enterococcus faecium Rep... 191 4e-47 UniRef50_A1UH53 Phage integrase family protein n=3 Tax=root RepI... 191 4e-47 UniRef50_A4XLL4 Phage integrase family protein n=1 Tax=Caldicell... 191 5e-47 UniRef50_Q0H247 DNA integration/recombination protein n=6 Tax=ro... 191 5e-47 UniRef50_A8MGA1 Integrase family protein n=7 Tax=Clostridiaceae ... 191 6e-47 UniRef50_UPI0001973B6A integrase family protein n=1 Tax=Clostrid... 190 6e-47 UniRef50_D0ADR3 Predicted protein n=2 Tax=Enterococcus faecium R... 190 8e-47 UniRef50_UPI0001C375E4 hypothetical protein RflaF_02473 n=2 Tax=... 189 1e-46 UniRef50_UPI0001C37E32 hypothetical protein RflaF_09962 n=1 Tax=... 189 1e-46 UniRef50_C7TH34 Phage-related integrase n=1 Tax=Lactobacillus rh... 189 1e-46 UniRef50_Q72GH2 DNA integration/recombination/invertion protein ... 189 2e-46 UniRef50_B6G0S2 Putative uncharacterized protein n=1 Tax=Clostri... 189 2e-46 UniRef50_B1J5J4 Integrase family protein n=4 Tax=Pseudomonas Rep... 188 2e-46 UniRef50_B6W9U7 Putative uncharacterized protein n=1 Tax=Anaeroc... 188 3e-46 UniRef50_C7GI02 Site-specific recombinase, phage integrase famil... 188 3e-46 UniRef50_C7N3D0 Site-specific recombinase XerD n=1 Tax=Slackia h... 188 4e-46 UniRef50_C1CVL1 Putative Integrase n=1 Tax=Deinococcus deserti V... 187 4e-46 UniRef50_Q9F0J7 Integrase-like protein n=7 Tax=Staphylococcus Re... 187 4e-46 UniRef50_C3WPY1 DNA integration/recombination/invertion protein ... 187 5e-46 UniRef50_B8I8G5 Integrase family protein n=1 Tax=Clostridium cel... 187 6e-46 UniRef50_A4J884 Phage integrase family protein n=1 Tax=Desulfoto... 187 8e-46 UniRef50_C0X0P7 Phage integrase family site specific recombinase... 186 9e-46 UniRef50_C0VGS2 Phage integrase n=2 Tax=Acinetobacter RepID=C0VG... 186 9e-46 UniRef50_C8X883 Integrase family protein n=5 Tax=Actinomycetales... 186 9e-46 UniRef50_C9AZK9 Phage integrase n=6 Tax=Enterococcus RepID=C9AZK... 186 1e-45 UniRef50_C0BF20 Putative uncharacterized protein n=1 Tax=Coproco... 186 1e-45 UniRef50_P96629 ICEBs1 integrase n=1 Tax=Bacillus subtilis RepID... 186 1e-45 UniRef50_Q1BC50 Phage integrase n=4 Tax=Mycobacterium RepID=Q1BC... 185 2e-45 UniRef50_Q03GP3 Integrase n=1 Tax=Pediococcus pentosaceus ATCC 2... 185 2e-45 UniRef50_Q30S15 Phage integrase n=2 Tax=Campylobacterales RepID=... 185 2e-45 UniRef50_A7GRV3 Phage integrase family protein n=18 Tax=Bacillus... 185 2e-45 UniRef50_A0QAN7 Site-specific recombinase, phage integrase famil... 185 3e-45 UniRef50_C6WDZ8 Integrase family protein n=6 Tax=Actinomycetales... 185 3e-45 UniRef50_D0WGY0 Putative phage integrase n=1 Tax=Slackia exigua ... 184 4e-45 UniRef50_Q831G3 Site-specific recombinase, phage integrase famil... 184 6e-45 UniRef50_C6LG06 Prophage LambdaBa02, site-specific recombinase, ... 184 6e-45 UniRef50_A9KI10 Integrase family protein n=1 Tax=Clostridium phy... 184 6e-45 UniRef50_A6TLJ2 Phage integrase family protein n=1 Tax=Alkaliphi... 184 7e-45 UniRef50_C3IU95 DNA integration/recombination/inversion protein ... 183 8e-45 UniRef50_D1CCF9 Integrase family protein n=1 Tax=Thermobaculum t... 183 1e-44 UniRef50_C2BD46 Possible phage integrase n=1 Tax=Anaerococcus la... 182 1e-44 UniRef50_A1AN30 Phage integrase family protein n=1 Tax=Pelobacte... 182 1e-44 UniRef50_Q7P8B6 DNA integration/recombination/invertion protein ... 182 2e-44 UniRef50_Q8ETV2 Integrase n=3 Tax=Bacilli RepID=Q8ETV2_OCEIH 182 2e-44 UniRef50_A1AUY6 Phage integrase family protein n=2 Tax=Desulfuro... 182 2e-44 UniRef50_A5KPC6 Putative uncharacterized protein n=3 Tax=Clostri... 182 2e-44 UniRef50_A6NY15 Putative uncharacterized protein n=1 Tax=Bactero... 182 3e-44 UniRef50_C5WEI1 Site-specific recombinase, phage integrase famil... 182 3e-44 UniRef50_C8NHZ6 Phage integrase family site-specific recombinase... 180 5e-44 UniRef50_A8RCT4 Putative uncharacterized protein n=1 Tax=Eubacte... 180 5e-44 UniRef50_C7H2F1 Prophage LambdaCh01, site-specific recombinase, ... 180 5e-44 UniRef50_C6MS46 Integrase family protein n=1 Tax=Geobacter sp. M... 180 6e-44 UniRef50_A2V4W2 Phage integrase n=5 Tax=Gammaproteobacteria RepI... 180 7e-44 UniRef50_A7VVX9 Putative uncharacterized protein n=2 Tax=Clostri... 180 7e-44 UniRef50_A6GBT9 Phage integrase n=2 Tax=Plesiocystis pacifica SI... 180 1e-43 UniRef50_Q1ISL4 Phage integrase n=1 Tax=Candidatus Koribacter ve... 179 1e-43 UniRef50_A1K6M5 Site-specific recombinase, phage integrase famil... 179 1e-43 UniRef50_Q38Y39 Site-specific recombinase, prophage lsa1 integra... 179 1e-43 UniRef50_A5ZQX5 Putative uncharacterized protein n=1 Tax=Ruminoc... 179 1e-43 UniRef50_A2RHC7 Phage integrase n=3 Tax=root RepID=A2RHC7_LACLM 179 1e-43 UniRef50_C7T893 Phage integrase n=5 Tax=Lactobacillus RepID=C7T8... 179 1e-43 UniRef50_UPI0001BCC5A1 phage integrase n=1 Tax=Aeromicrobium mar... 179 2e-43 UniRef50_C5WGZ4 Integrase n=18 Tax=root RepID=C5WGZ4_STRDG 179 2e-43 UniRef50_C7XQF9 Phage integrase n=1 Tax=Fusobacterium sp. 3_1_36... 179 2e-43 UniRef50_B6FRP3 Putative uncharacterized protein n=4 Tax=Bacteri... 178 3e-43 UniRef50_D2BLD3 Phage integrase n=4 Tax=root RepID=D2BLD3_LACLK 178 4e-43 UniRef50_A5TWD8 Possible integrase n=3 Tax=Fusobacterium RepID=A... 178 4e-43 UniRef50_UPI0001C37C1F integrase family protein n=1 Tax=Ruminoco... 178 4e-43 UniRef50_A0JQA1 Phage integrase n=2 Tax=Lactobacillales RepID=A0... 177 4e-43 UniRef50_B5H9T3 TraSA integrase fusion protein n=4 Tax=Streptomy... 177 4e-43 UniRef50_UPI0001BCCDB9 integrase family protein n=1 Tax=Selenomo... 177 6e-43 UniRef50_B6BNI8 Phage integrase n=1 Tax=Campylobacterales bacter... 177 7e-43 UniRef50_B2V4P6 Phage integrase family protein n=9 Tax=root RepI... 177 7e-43 UniRef50_A0R499 Gp41 protein n=2 Tax=Mycobacterium RepID=A0R499_... 177 8e-43 UniRef50_Q1D2W1 Site-specific recombinase, phage integrase famil... 177 8e-43 UniRef50_Q854V7 Gp41 n=1 Tax=Mycobacterium phage Che9c RepID=Q85... 177 8e-43 UniRef50_Q17VL1 Bacteriophage-related integrase n=4 Tax=Helicoba... 177 9e-43 UniRef50_A8RK44 Putative uncharacterized protein n=1 Tax=Clostri... 176 9e-43 UniRef50_B1I9D1 Site-specific recombinase, phage integrase famil... 176 1e-42 UniRef50_Q65KE0 Lambda integrase-like, N-terminal,DNA breaking-r... 176 1e-42 UniRef50_Q88UJ5 Prophage Lp3 protein 1, integrase n=1 Tax=Lactob... 176 1e-42 UniRef50_B3WDC1 Integrase n=3 Tax=root RepID=B3WDC1_LACCB 176 1e-42 Sequences not found previously or not previously below threshold: UniRef50_C8VWK7 Integrase family protein n=1 Tax=Desulfotomaculu... 213 9e-54 UniRef50_D1A578 Integrase family protein n=1 Tax=Thermomonospora... 209 1e-52 UniRef50_C1IBC3 Phage integrase n=1 Tax=Clostridium sp. 7_2_43FA... 205 3e-51 UniRef50_D2SBK5 Integrase family protein n=1 Tax=Geodermatophilu... 202 2e-50 UniRef50_A6P1V8 Putative uncharacterized protein n=2 Tax=Bactero... 202 2e-50 UniRef50_UPI0001C37C27 integrase family protein n=1 Tax=Ruminoco... 200 1e-49 UniRef50_Q252J3 Putative uncharacterized protein n=1 Tax=Desulfi... 199 2e-49 UniRef50_D0L542 Integrase family protein n=3 Tax=Bacteria RepID=... 197 4e-49 UniRef50_C4V5B3 Prophage LambdaCh01, site-specific recombinase p... 197 4e-49 UniRef50_B0PGN1 Putative uncharacterized protein n=2 Tax=Clostri... 197 6e-49 UniRef50_A5N1F6 Integrase-related protein n=3 Tax=Clostridia Rep... 196 1e-48 UniRef50_A5N1D5 Phage integrase-related protein n=2 Tax=Clostrid... 196 1e-48 UniRef50_A1SI41 Phage integrase family protein n=1 Tax=Nocardioi... 195 3e-48 UniRef50_UPI000169495E prophage LambdaBa04, site-specific recomb... 193 9e-48 UniRef50_A6NRR1 Putative uncharacterized protein n=1 Tax=Bactero... 192 2e-47 UniRef50_C9N6T9 Integrase family protein n=7 Tax=Streptomyces Re... 191 3e-47 UniRef50_D2SF19 LigA n=1 Tax=Geodermatophilus obscurus DSM 43160... 190 7e-47 UniRef50_B0MMM2 Putative uncharacterized protein n=1 Tax=Eubacte... 189 2e-46 UniRef50_C9NE73 Integrase family protein n=1 Tax=Streptomyces fl... 188 3e-46 UniRef50_C5CAV2 Site-specific recombinase, integrase family n=1 ... 187 4e-46 UniRef50_Q24ZE5 Putative uncharacterized protein n=1 Tax=Desulfi... 186 1e-45 UniRef50_C9XJT1 Integrase n=6 Tax=Clostridium difficile RepID=C9... 184 4e-45 UniRef50_A6G3J3 Site-specific recombinase, phage integrase famil... 184 4e-45 UniRef50_Q0REL9 Integrase (Recombinase) n=2 Tax=Frankia RepID=Q0... 184 6e-45 UniRef50_B2THD3 Site-specific recombinase, phage integrase famil... 180 6e-44 UniRef50_C0X6I8 Phage integrase family site specific recombinase... 180 7e-44 UniRef50_B0ABY5 Putative uncharacterized protein n=3 Tax=Clostri... 179 2e-43 UniRef50_B2TMD1 Prophage LambdaBa04, site-specific recombinase, ... 178 3e-43 UniRef50_UPI0001B572BA integrase family protein n=1 Tax=Streptom... 176 9e-43 UniRef50_Q88SM0 Prophage Lp4 protein 1, integrase n=1 Tax=Lactob... 176 1e-42 >UniRef50_P76168 Putative lambdoid prophage Qin defective integrase (Fragment) n=64 Tax=root RepID=INTQ_ECOLI Length = 385 Score = 523 bits (1347), Expect = e-147, Method: Composition-based stats. Identities = 385/385 (100%), Positives = 385/385 (100%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL Sbjct: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN Sbjct: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW Sbjct: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAID 240 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAID Sbjct: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAID 240 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW Sbjct: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN Sbjct: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 Query: 361 AQVALLNTQLSEFAPTMPHNEAMKN 385 AQVALLNTQLSEFAPTMPHNEAMKN Sbjct: 361 AQVALLNTQLSEFAPTMPHNEAMKN 385 >UniRef50_UPI0001826473 putative integrase n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826473 Length = 431 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 218/384 (56%), Positives = 287/384 (74%), Gaps = 1/384 (0%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 GELR+SVC++IKTG F+YA QFP S NL +FG +++T+ ELA K+L LK E++ ++ Sbjct: 45 GELRASVCFSIKTGSFNYAAQFPDSPNLRRFGMESKEITVLELANKWLELKRMEISTNAM 104 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 + Y ++ +N++ IG L S++ +E LL +RKELLTGY + K+ GRS TVNN Sbjct: 105 SRYSSIARNMVPRIGGDRLVSAVTQEDLLFIRKELLTGYHVLKTGQKTPVKGRSVRTVNN 164 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 YM ++ +F F D+GY+ NPF GIS LK +RT PDPL+REEFIR+I+AC +QQ KN+W Sbjct: 165 YMRTMSGMFNFAADSGYVKANPFNGISLLKRARTEPDPLTREEFIRMINACTHQQLKNMW 224 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-KDRFTVPKTQAGTNRVIHLIKPAI 239 ++VYTGVR GEL AL WEDIDLK GTM+IRRN FT+PKT+AGT+R+I+LI+PAI Sbjct: 225 SLAVYTGVRHGELVALAWEDIDLKAGTMIIRRNHTLTKEFTLPKTEAGTDRIINLIQPAI 284 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 D L+SQ +TRL K+H I+V REYGR+ CTFVF P++ +R G+H+ V SI Q Sbjct: 285 DVLKSQAEMTRLGKQHQIEVKLREYGRSVAHPCTFVFNPQIVSRNSLAGNHYAVGSINQS 344 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 W++A++RAG+R+RK+YQSRHTYACWSL AGANP FIA QMGH DAQMV++VYG WM+ENN Sbjct: 345 WESAMRRAGIRYRKAYQSRHTYACWSLAAGANPNFIAKQMGHTDAQMVYRVYGSWMAENN 404 Query: 360 NAQVALLNTQLSEFAPTMPHNEAM 383 QV +LN +LSEFAP+MPH Sbjct: 405 QDQVLILNQKLSEFAPSMPHATGS 428 >UniRef50_B6XGP6 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XGP6_9ENTR Length = 427 Score = 357 bits (915), Expect = 6e-97, Method: Composition-based stats. Identities = 180/385 (46%), Positives = 257/385 (66%), Gaps = 6/385 (1%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 GELR+++CY IKTG FDY+ +FP S+N + + +++T +A K++ LK EVA ++ Sbjct: 44 GELRTAICYKIKTGAFDYSVEFPESKNCNEKSISNKNVTFGYVANKWVELKRIEVAVSTF 103 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 Y++++ + I + + + N E +L VR ++LT I N V++ GRS TVNN Sbjct: 104 EAYKSIVNVLFFFIDKNKMINLFNLEDILSVRNKMLTSPTIEPVNR-VSKIGRSVSTVNN 162 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 YM LN +F F +N Y+ N I LK+SR +PDP+++EEF RL++A RN QAKN+ Sbjct: 163 YMKILNCIFCFAAENKYIETNVLSSIKNLKKSRAVPDPITKEEFPRLLNATRNIQAKNML 222 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK-DRFTVPKTQAGTNRVIHLIKPAI 239 VSVYTG+RPGELCAL +EDID T+ ++RN++ F++PKT + T+RVIH++ P Sbjct: 223 IVSVYTGLRPGELCALAYEDIDFIERTITVKRNISNIGDFSLPKTPSSTDRVIHMLDPVY 282 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 ++LR QM+LTR++ I++V REYG+ + CTFVFQP V AR H++ + Sbjct: 283 ESLREQMSLTRMTSPEIVNVEMREYGKYREDSCTFVFQPSVVARNGLETKHYSPGGFNGI 342 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 W A IKR+G+RHRKSYQ+RHTYACW L+AGANPAFIA QMGH+ A+M++ VYG WM EN+ Sbjct: 343 WGALIKRSGVRHRKSYQTRHTYACWMLSAGANPAFIATQMGHSSAKMIYDVYGAWMKEND 402 Query: 360 NAQVALLNTQLSEFAPTMPHNEAMK 384 Q+A++N AP MPH K Sbjct: 403 KDQIAIMNR----NAPHMPHPIESK 423 >UniRef50_A8GE25 Integrase family protein n=18 Tax=Enterobacteriaceae RepID=A8GE25_SERP5 Length = 428 Score = 356 bits (913), Expect = 9e-97, Method: Composition-based stats. Identities = 179/386 (46%), Positives = 263/386 (68%), Gaps = 5/386 (1%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 GELR+SVCY IKTG F Y K+FP+SRN+ AR+++T+ ++ +K+L LKE EV+K +L Sbjct: 43 GELRTSVCYEIKTGNFSYEKRFPNSRNVT-INAARENITVNDIIKKWLNLKEMEVSKGTL 101 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPK--SNYIVTQPGRSAVTV 118 Y + S + + + I +E +L RK +LT Q PK + GR+ TV Sbjct: 102 YRYTSHCGVTASYLNPERKINEIRQEDILLARKRMLTEPQQPKIHEKRKSVRQGRAVPTV 161 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKN 178 N+YM + A+F F V NGY+A+NPF+G+SPLK+ R PDPL++EE+ R+I +C QQ +N Sbjct: 162 NSYMFCMRAIFDFAVSNGYIANNPFEGVSPLKKQRPAPDPLTKEEYQRVIVSCPTQQMRN 221 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-KDRFTVPKTQAGTNRVIHLIKP 237 + +++ TG+R GEL AL WED+D +N T+ I RNL+ K+ FT+PKT AG R I L Sbjct: 222 MITLAINTGLRHGELYALAWEDLDTQNWTISISRNLSLKEHFTLPKTDAGM-RTIQLTTV 280 Query: 238 AIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIR 297 AI+A++SQM LTRLS H + V+ REYG+ CTF+F P +++R + D ++ + Sbjct: 281 AIEAIKSQMALTRLSNAHRVTVNLREYGKKRTDDCTFIFSPRITSRNGSSADWYSPGAFN 340 Query: 298 QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 W +++AG++HRKSY++RHT+ACW+L+ GANP F+A+QMGH+ AQM++ VYGKWM+E Sbjct: 341 GAWKTILRKAGVKHRKSYETRHTFACWALSCGANPNFVAHQMGHSSAQMLYNVYGKWMTE 400 Query: 358 NNNAQVALLNTQLSEFAPTMPHNEAM 383 NN+ QV +LN S+ AP +PH + + Sbjct: 401 NNDHQVNILNASFSQNAPQVPHEQII 426 >UniRef50_A2P3A8 Integrase n=3 Tax=Vibrionaceae RepID=A2P3A8_VIBCH Length = 412 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 159/383 (41%), Positives = 232/383 (60%), Gaps = 17/383 (4%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 R+++C+AI+TG F Y + FP S+ ++ + ++D+TIKEL +++L LK EV ++ Y Sbjct: 46 RTAICHAIQTGQFIYKEWFPESKKANQYSD-KKDITIKELFDRWLDLKVIEVTPATIKNY 104 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 + +K + + E L S + +EKLLE+RK S T N YM Sbjct: 105 QQRVKQVYWHLPETTLVSEVTQEKLLELRKRF--------------TETCSPSTANTYMR 150 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVS 183 L +F F +++GY GI LK + P PLS EEF R+I+ C+++Q N W V+ Sbjct: 151 TLKGIFSFAINSGYSDPALLNGIKELKTQKRKPQPLSEEEFQRVIEHCQHEQDANFWTVA 210 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-KDRFTVPKTQAGTNRVIHLIKPAIDAL 242 VYTG+R GEL AL WEDIDL+NGT+ +RRNL + RF +PKT +G R ++L+ PA+ AL Sbjct: 211 VYTGLRHGELMALAWEDIDLENGTITVRRNLTLEGRFKLPKTISG-ERTVNLLNPALAAL 269 Query: 243 RSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDA 302 ++QM T + E IDV REYG+ ++Q VF P V+AR + ++ SI + W+ Sbjct: 270 KAQMKWTFMLPELEIDVLQREYGKLQRQFIRPVFSPSVTARYEVDNRYYHHVSIWEKWNM 329 Query: 303 AIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQ 362 KRA L +RK YQ+RHTYACW L+AGANP FIA QMGH+ A+ V+Q YG W+ ++ Q Sbjct: 330 LCKRAKLTYRKPYQTRHTYACWMLSAGANPTFIAKQMGHSSAKEVYQTYGDWVGDHTKGQ 389 Query: 363 VALLNTQLSEFAPTMPHNEAMKN 385 + +LN + AP P + K+ Sbjct: 390 LDMLNARYGNIAPYTPQGKESKS 412 >UniRef50_D0Z3D7 Putative integrase n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z3D7_LISDA Length = 428 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 147/385 (38%), Positives = 221/385 (57%), Gaps = 7/385 (1%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQ--DLTIKELAEKFLALKETEVAKT 58 G LR+ + I G F+Y ++FP+S+N + D ++ + E FL +K E+ ++ Sbjct: 44 GRLRAVIVSEIACGKFNYLERFPNSKNTLQISVQNPHVDCSLNDFIEHFLLIKSVELTES 103 Query: 59 SLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 S+ R+ +K ++G + L S+I ++ +R +LL G S T GRS TV Sbjct: 104 SIIRTRSGLKTCAKLLGGERLISNITHADIMSMRLKLLNGSNFSPSPIRRTSNGRSVKTV 163 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACR-NQQAK 177 N Y+T +++F++ + NPF G+S L+ +T P+PL +EFIRLI+ +Q Sbjct: 164 NTYLTICSSLFKYAYRTEAIHTNPFDGVSRLRTVKTPPNPLEHDEFIRLINHPSIREQDV 223 Query: 178 NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-KDRFTVPKTQAGTNRVIHLIK 236 NLW V+VYTG+R GEL AL WEDIDL T+ ++R + RF VPKT++G R I+L+ Sbjct: 224 NLWTVAVYTGLRHGELSALAWEDIDLVKRTITVKRTATQQKRFRVPKTESG-ERTINLLA 282 Query: 237 PAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI 296 PA +AL Q T L ++V R+ +++CT+VF+ + + I Sbjct: 283 PAYEALVRQKACTFLYPSIAVEVESRQKRNHIQEQCTWVFRMTSYSAEAKGN--ISTKVI 340 Query: 297 RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 MW K AG+ +R YQ+RHTYACW L +GANPAFIA+QMGH+D MV VYG WM Sbjct: 341 SNMWRKCTKLAGIAYRNPYQTRHTYACWLLNSGANPAFIASQMGHSDMSMVISVYGAWMP 400 Query: 357 ENNNAQVALLNTQLSEFAPTMPHNE 381 NN +++A + QL+ AP+ PH + Sbjct: 401 SNNESEIAKIERQLNCIAPSAPHQK 425 >UniRef50_P76056 Putative lambdoid prophage Rac integrase n=30 Tax=Bacteria RepID=INTR_ECOLI Length = 411 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 158/373 (42%), Positives = 235/373 (63%), Gaps = 7/373 (1%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 G LR+ + + I +G F+Y ++FP S K R T EL + + +KETE+ ++ Sbjct: 44 GNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTM 103 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 ++ +K + II E S I +L R ELL G + N + GR+ TV+N Sbjct: 104 KKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDN 163 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 Y+ L ++ +F +G+++ PF+G+ L+ +R PDPLS+ EF L+++ + Q ++NLW Sbjct: 164 YIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ-SQNLW 222 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-KDRFTVPKTQAGTNRVIHLIKPAI 239 +VY+G+R GEL AL WED+DL+ G + +RRNL D F PKT AG R + L++PA+ Sbjct: 223 KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGI-RTVTLLQPAL 281 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEV-SARVKNYGDHFTVDSIRQ 298 +AL+ Q LT ++ I + REYGRTEKQK FVF P V + + K Y ++V S+ Sbjct: 282 EALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPY---YSVSSLGA 338 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 W+AA+KRAG+R R Y +RHT+ACW LTAGANPAFIA+QMGH AQMV+++YG W+ + Sbjct: 339 RWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 Query: 359 NNAQVALLNTQLS 371 N+ Q+A+LN +LS Sbjct: 399 NDEQIAMLNARLS 411 >UniRef50_A7MYL9 Putative uncharacterized protein n=3 Tax=Vibrio harveyi group RepID=A7MYL9_VIBHB Length = 411 Score = 287 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 133/376 (35%), Positives = 208/376 (55%), Gaps = 11/376 (2%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFG---EARQDLTIKELAEKFLALKETEVAKT 58 +LR+S+ I G FDY +FP+S+ + F + ++LT++EL + ++ LK+T +A Sbjct: 44 QLRASILSEISLGTFDYLSRFPTSKKAQLFATPEQRGKNLTVRELFDDYIQLKKTTMASQ 103 Query: 59 SLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 SL + IGE+ S+I L+ +K ++ RSA T+ Sbjct: 104 SLYVLNNTARACCLFIGEERTISNITIMDALKCQKLMVDS-------PTRNGRPRSAKTI 156 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKN 178 NN + + F V + ++ DNPF + L PDPL EEF +LI++ N Q +N Sbjct: 157 NNMIKLMRRCFDLAVKSKFIDDNPFLHVELLSGGSGEPDPLELEEFHQLIESTTNLQQRN 216 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPA 238 ++ +++YTG+R GELCAL WED+DL+ GT+ + RN+ +R + R IHL++PA Sbjct: 217 IFTLAIYTGMRTGELCALAWEDVDLEKGTIEVTRNVTIERKFTTPKNKKSERTIHLLQPA 276 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 + AL+SQ LT L I V + ++ FVF PE + + + + + Sbjct: 277 LLALKSQRKLTMLGPVRDILVEVKGSNTFRQESVQFVFIPE-HRNGQETSETYKTTTYNR 335 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 +W A+KRAG+RHR SYQSRHTYACW +T GAN +FIA QMGH M+ +VYG++M + Sbjct: 336 LWSRALKRAGIRHRCSYQSRHTYACWLITKGANLSFIAEQMGHKSTMMLERVYGRFMKSH 395 Query: 359 NNAQVALLNTQLSEFA 374 ++ Q+ LN ++ Sbjct: 396 SHEQIEYLNGIMASNK 411 >UniRef50_A8T0M8 Putative integrase n=1 Tax=Vibrio sp. AND4 RepID=A8T0M8_9VIBR Length = 407 Score = 259 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 113/366 (30%), Positives = 184/366 (50%), Gaps = 24/366 (6%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 R ++ Y IK G+F YA FP S + ++R T E+ +K+L LK+ ++ ++ Y Sbjct: 51 RETIMYEIKIGIFRYAAHFPDSPYATEQSQSR---TFGEMVDKYLQLKQADLRSSTYKKY 107 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 ++ K + G S+++ E + E+R L+ GR A T+N Y Sbjct: 108 VSLFKITKNAYGANRSCSTLSPESVSELRALLI--------------KGRGARTLNTYFR 153 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVS 183 +N F + GY+ N + + +K +P + +E + +DAC +Q KN+ + Sbjct: 154 AINTFFGWLHKMGYVDRNFSEFMPSVKTPERNINPFTIDEINKALDACMQEQHKNMITLL 213 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR-FTVPKTQAGTNRVIHLIKPAIDAL 242 YTG+R GE+C L WED+D +N + IRR + R PKT R + L+ PA++AL Sbjct: 214 AYTGLRTGEICGLAWEDVDFENKVLTIRRATFESRGLKTPKTD--RERTVDLMPPALEAL 271 Query: 243 RSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARV--KNYGDHFTVDSIRQMW 300 ++Q L+ + +V + FVF P+ + + K D+F+ + +MW Sbjct: 272 QAQKKLSSHYPQKEHEVELAD-KTIRLDNIRFVFNPKATENLNAKTPYDYFSKTAPNKMW 330 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLT-AGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 RAG+ +R YQ RHTYA W L+ A N A++A QMGH++ M+ VYGKWM N Sbjct: 331 RNICIRAGIPYRNVYQLRHTYASWMLSYANVNIAYLAQQMGHSNFLMIASVYGKWMKNKN 390 Query: 360 NAQVAL 365 ++ Sbjct: 391 ASESEK 396 >UniRef50_UPI0001BC493F putative integrase n=1 Tax=Neisseria mucosa ATCC 25996 RepID=UPI0001BC493F Length = 415 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 107/388 (27%), Positives = 183/388 (47%), Gaps = 53/388 (13%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLN 61 +LR VC I GVFDYA+ FP S+ E E + T +E+AE +LA +++ ++L+ Sbjct: 46 KLREEVCTRIAIGVFDYAEFFPDSKRAE---ETERSPTFREMAEAWLAT-VNQLSHSTLS 101 Query: 62 TYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 YR ++ ++L IG+ ++ Q ++ SA T NN Sbjct: 102 RYRGMLNSHVLPKIGDMSI-----------------DRIQYSTLAGLLATLDCSAKTRNN 144 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQ-AKNL 179 T + F + +G + DNP + ++ K + PDP + EE ++ +N+ N Sbjct: 145 IATVIRQPFVLALRDGRIKDNPAQHLANAKVQKEPPDPFTLEEAEAILGYLKNEPVFHNY 204 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAI 239 + ++ ++G+R EL AL W+DID + + + + + KT + R I L A+ Sbjct: 205 FELAFFSGMRTSELIALTWQDIDFQRQCVCVNKASVAGKLKSTKTH--SYRDIELNSRAL 262 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI-RQ 298 +ALR Q T L+ +VF + G F D + + Sbjct: 263 EALRRQWQRTGLA-------------------SGYVFINPKT------GSPFENDKVPWR 297 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS-E 357 W AIK AG+R+RK Y +RHT+A +L AGANP ++A QMGH+ +M+ + Y +W+ Sbjct: 298 PWQHAIKIAGVRYRKPYNTRHTFATLNLMAGANPMWVARQMGHSTMKMLLENYSRWIDLA 357 Query: 358 NNNAQVALLNTQL-SEFAPTMPHNEAMK 384 + + + + + A ++P N M+ Sbjct: 358 DKQREKSKIEQLFDGKCANSVPKNTEME 385 >UniRef50_A9KZM7 Integrase family protein n=4 Tax=Gammaproteobacteria RepID=A9KZM7_SHEB9 Length = 431 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 105/383 (27%), Positives = 175/383 (45%), Gaps = 24/383 (6%) Query: 4 RSSVCYAIKTGVFDYAKQFPSS-RNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNT 62 R+++ I FDY FP S + +E G + + +L +++ AK++ Sbjct: 55 RNTILTEIAENRFDYIAHFPESIKAMEFAGILIERRNVANGVNHWLKIQDVTKAKSTSKN 114 Query: 63 YRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 YR+ K++++ G L S I++ LL + +L + G S TVN+ Sbjct: 115 YRSKSKHVINYFGGDQLISEISRSHLLMFQANML-------------KAGLSPKTVNDVF 161 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKES--RTIPDPLSREEFIRLI-DACRNQQAKNL 179 T + V+ ++G + NP IS ++ DP +R+E R+ D + N+ Sbjct: 162 TIVRGVWYVAFEDGIIRSNPLDRISNIERDTLEETADPFTRDELERIAADDTSRRGDINM 221 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAI 239 +TG+ E+ AL WEDID N T+ IRR ++ VPK + G RVI LI PA Sbjct: 222 IMFCCWTGLSLSEVIALAWEDIDTVNWTVNIRRARVLTQYKVPK-ERGRVRVIELIDPAK 280 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 + L QM T + ++V R+ T+ + FVF S G + S+R+ Sbjct: 281 EWLIEQMQHTMMLPTIELEVKQRDNITTKNENIRFVFLNGKS------GLPWYDHSVRRW 334 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 + ++R LRHR Q RHT+A L+ ++A Q+GH+D M+ + YGKW+ +++ Sbjct: 335 FTGILERTKLRHRGPNQCRHTFASQLLSNYVPLEWVARQLGHSDTTMIKKHYGKWIPKDS 394 Query: 360 NAQVALLNTQLSEFAPTMPHNEA 382 ++ L T Sbjct: 395 QKMANRVSEMLGFTKDTEGEQNG 417 >UniRef50_C9RBE5 Integrase family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RBE5_AMMDK Length = 414 Score = 247 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 88/350 (25%), Positives = 146/350 (41%), Gaps = 44/350 (12%) Query: 34 ARQDLTIKELAEKFLA-LKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEV 91 A LT+ E +L K+ ++ T+L Y VI+ IL +G L S + L + Sbjct: 94 APARLTLGEWLATWLETYKKGKLRPTTLANYETVIRAYILPSLGSVPLRS-VTPASLQAL 152 Query: 92 RKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE 151 L + G SA TV LNA + V NG L NP + P K Sbjct: 153 YNSL-------------SARGLSARTVRLVHVVLNACLKQAVKNGLLVRNPAEATEPPKL 199 Query: 152 SRTIP-DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 R +P PL+REE + A R ++ + +++ TG+R GE+ L WED+DL+ G + + Sbjct: 200 KRRVPVRPLAREEVEAFLKAARGERLYPAFALALKTGLRRGEVLGLKWEDVDLERGVLRV 259 Query: 211 RRNLAKDR----------FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVH 260 RR+L + + F PKT+ + R + L + + L+S K + + + Sbjct: 260 RRSLVEAKDPETGKVRLVFQEPKTEK-SRRTVPLTRDVVALLKSHKARQNEEKLYFGEAY 318 Query: 261 FREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHT 320 + VF E+ G + + + + +K+AGL + + RHT Sbjct: 319 ---------EDNGLVFCTEL-------GKPIWPRNFLRAFHSVLKKAGLERHRFHALRHT 362 Query: 321 YACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 +A L +G + +GH VY + + + V L+ L Sbjct: 363 FATLLLASGEELKNVQELLGHERISTTADVYAEVLEDAKKKAVTRLDAFL 412 >UniRef50_Q2RHJ2 Phage integrase n=3 Tax=Firmicutes RepID=Q2RHJ2_MOOTA Length = 390 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 66/356 (18%), Positives = 139/356 (39%), Gaps = 37/356 (10%) Query: 35 RQDLTIKELAEKFL-ALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVR 92 +T+++ ++L + + +++ +Y V++ +++ +G L Sbjct: 66 PSKITVEQWLNRWLTDYAKPHLRQSTWESYETVLRLHVIPTLGSIPL------------- 112 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 + L I + + G S V L+ ++G L NP + P + Sbjct: 113 -KKLQPADIQRLYASKLESGLSPTRVRYIHVVLHEAMSQARESGLLLQNPTEAAKPPRHP 171 Query: 153 RTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 + PL+ E+ R ++ + + +++ TG+R GE+ L W+D+DL+ G + +R+ Sbjct: 172 KKKVQPLNPEQVKRFLETAKQDPLYPAFLLALGTGLRRGEILGLRWQDLDLQKGILQVRQ 231 Query: 213 NLAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTE 268 +L + R F PKT+ + R I L + AL+ +K + + Sbjct: 232 SLIRTREGLKFEEPKTEK-SRRQIPLPPSVVAALKRHKAWVNQNKLILG---------PD 281 Query: 269 KQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTA 328 + VF E G + ++ + +AGL H + + RHT+A L Sbjct: 282 YEDHDLVFPVE-------NGRPRDPKGFAEYFNRLLDKAGLPHIRLHDLRHTHATLLLLE 334 Query: 329 GANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNEAMK 384 G +P + ++GH+ + +Y + ++ L P +K Sbjct: 335 GVHPKVVQERLGHSTVSITLDIYSHILPGLQEKAAERIDGLLQPKENPSPKEGTIK 390 >UniRef50_Q1AUQ4 Phage integrase n=3 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUQ4_RUBXD Length = 379 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 80/347 (23%), Positives = 141/347 (40%), Gaps = 44/347 (12%) Query: 37 DLTIKELAEKFL-ALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKE 94 +L + E +++L E V +L Y+ ++ +I ++GE L ++ + + ++ Sbjct: 65 NLKVGEYMDRWLRDSVEGNVGPRTLANYKLQVRRHIKPVLGEIQL-KTLTPAHVQGLYRQ 123 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRT 154 L G + +V L+ + G + N + + K Sbjct: 124 KLDA-------------GLAPSSVRYIHAVLHRALTQALRWGLVPRNVSEAVDLPKLVSE 170 Query: 155 IPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNG---TMMIR 211 D L+ EE + +DA R + + L+ V+V TG+R GEL L W DIDL T+ + Sbjct: 171 EVDALTPEEARKFLDAARGDRFEALYVVAVMTGMRRGELLGLRWSDIDLGQNAPATLRVG 230 Query: 212 RNLAKDR------FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 R L + R F PK G R I L A++AL++ R Sbjct: 231 RQLQRMRDGSGLKFVAPK--GGKGRTIRLPSRAVEALKAH----------------RARQ 272 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSI-RQMWDAAIKRAGLRHRKSYQSRHTYACW 324 E+ K +++ E G +I R+ + +K+AGL + + RHT A Sbjct: 273 AEERLKAGPLYRDEGLVFASEVGTPLEPSNIDRRSFKPLLKKAGLPDIRFHDLRHTCATV 332 Query: 325 SLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 L+ G NP F+ +GHAD ++ Y ++ + + + L Sbjct: 333 LLSQGVNPKFVQELLGHADIKLTLGTYSHFLPSMGDQTANAMESALG 379 >UniRef50_C1XYN2 Site-specific recombinase XerD n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XYN2_9DEIN Length = 387 Score = 241 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 78/337 (23%), Positives = 136/337 (40%), Gaps = 17/337 (5%) Query: 37 DLTIKELAEKFLALKETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKEL 95 +T+KE E++L E V T+ Y+ + K+ + I+G+ + + L + +L Sbjct: 60 RITLKEFCERWLTSVEHRVKPTTHYGYKVALEKHAIPILGDIAV-QRLQPLHLTHLYADL 118 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 L P N S TV L+A + V G L NP + P + R Sbjct: 119 LKKRIHP--NDPKRLKTLSPTTVRLVHRTLHAALEDAVRWGLLPWNPADRVKPPQAPRYT 176 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 + + EE R + ++ + L+ +++ TG+R GEL L W DID + G + +R+NL Sbjct: 177 GEVWTPEEVWRFLAEAQHSRLYALFFLALMTGMRRGELLGLKWADIDWQEGAIWVRQNL- 235 Query: 216 KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFV 275 T+AG+ RV+ K RS + S + RE ++ Sbjct: 236 --------TKAGSKRVVQSPK----TYRSSRPVDVSSDVLEVLQQHREQQEKDRLGIGDA 283 Query: 276 FQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFI 335 + E + G ++R+ + A IKRA ++ + + R T+ AG +P + Sbjct: 284 WTDEGWVFTTSVGTPIEPSNLRREFLAIIKRAKVKEIRFHDLRDTHVSLLALAGVDPKVV 343 Query: 336 ANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 + ++GHA Q Y + L Sbjct: 344 SERVGHASVAFTQQTYQHLFRAQRKKAALAVGELLGP 380 >UniRef50_B7DTQ3 Integrase family protein n=2 Tax=Bacillales RepID=B7DTQ3_9BACL Length = 392 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 70/377 (18%), Positives = 140/377 (37%), Gaps = 44/377 (11%) Query: 15 VFDYAKQFPSSRNLEKFGEA------------RQDLTIKELAEKFLALKETEVAKTSLNT 62 + + F + R+ E+F T+ ++L K T+V +L + Sbjct: 37 RYKWHGGFKTKRDAERFLATLVEQVHDGTYVEPSKKTVGAYLREWLDDKRTKVRPGTLRS 96 Query: 63 YRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 Y ++++ ++ I + +L ++R + ++ S +V + Sbjct: 97 YVWLVEH--------HIIPRIGQLELAKLRPSHIQKLY---TDLQTGDEHISKRSVLHAH 145 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCV 182 L+ V G + N + P + +R + E+ + A R + + + Sbjct: 146 RILHQALDRAVKWGLITRNVTDAVEPPRPARQEMRVWTDEQLDAFLQAARKSRYYVAFVL 205 Query: 183 SVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD----RFTVPKTQAGTNRVIHLIKPA 238 TG+R GE+ AL WED+DL+ G + + R+ + R PKT++G R I L Sbjct: 206 LSSTGMRVGEVLALRWEDVDLQAGLVRVVRSYSYTGKGYRIEEPKTESG-RRSIALPPAV 264 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 +D LR T + + ++ +G ++R Sbjct: 265 VDLLRKHKTEQAARRLMVGSA----------------WEDNDLVICTAFGKPILQHNLRT 308 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 + I+R GL + + RHT+A L G +P + ++GH+D + Y + Sbjct: 309 SFHRIIERTGLPRIRLHDLRHTHATILLQRGVHPKVVQERLGHSDITLTLNTYSHVVPGL 368 Query: 359 NNAQVALLNTQLSEFAP 375 A ++ S + Sbjct: 369 QEAAARSIDDLFSPSSK 385 >UniRef50_B0KAZ5 Phage integrase family protein n=3 Tax=Thermoanaerobacter RepID=B0KAZ5_THEP3 Length = 403 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 80/347 (23%), Positives = 144/347 (41%), Gaps = 27/347 (7%) Query: 37 DLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 ++T+K+ +K+L K++ +A + N Y I+ ++ +I KLL++ ++ Sbjct: 68 NITVKDYLKKWLETKKSSLALKTYNDYEQKIRLYIN--------PAIGNYKLLKLTPLII 119 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP 156 + + G SA T+ T LN + + L NP G + K+++ Sbjct: 120 QNMYNN-----MLEQGLSARTIRYTHTVLNEALKQAIKWQMLRYNPCDGTTLPKQAKKEM 174 Query: 157 DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK 216 L+ E+ + ++AC + L+ + + +G+RP E L WEDID KN + ++R L + Sbjct: 175 KVLTPEQAKKFLEACVYNRWGILFELLLISGMRPSEALGLKWEDIDWKNNRIAVQRTLTR 234 Query: 217 DR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDV--------HFREY 264 + PKT + R I L + ++ L+ K + F+ Sbjct: 235 VKNNWQLKEPKT-PQSRRTIPLPREVMNDLKEHRKQQSKEKLKAKEYINYDKDKNKFKPE 293 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIR-QMWDAAIKRAGLRHRKSYQSRHTYAC 323 EK K V+ G + +I Q + +K AGL + + Y RHT A Sbjct: 294 EWEEKLKDPKVYVDYGLVFATETGRPLDLANINYQYFKPLLKNAGLPNIRLYDLRHTCAT 353 Query: 324 WSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 L AG NP ++ ++GHA+ + Y + L L Sbjct: 354 LLLLAGENPKVVSERLGHANITLTLDTYSHVLPTMQEEATQKLKQML 400 >UniRef50_A4AD26 Prophage integrase n=5 Tax=Gammaproteobacteria RepID=A4AD26_9GAMM Length = 399 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 92/365 (25%), Positives = 159/365 (43%), Gaps = 47/365 (12%) Query: 7 VCYAIKTGVFDYAKQFPSSRNLEKFGEARQDL--------TIKELAEKFLALKETEVAKT 58 V I G FDYA FP S N +F + + + T K A++++ + Sbjct: 45 VESEIVLGTFDYAAYFPESPNAARFADHDKQIEQRSAKTPTFKAFADQWMEENRIGWKPS 104 Query: 59 SLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVT 117 +NT + K+++ G + S+I+KE +L R +L +IP+ + V G SA Sbjct: 105 YINTLEHSLSKHVIPAFGSVPM-SAISKEDILAFRNQLA---RIPRKDGSV---GLSAAR 157 Query: 118 VNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAK 177 +N M L + + + DNP++GI LK RT +P + +E ++D R Sbjct: 158 INTVMVPLRQIMREA-SERFGFDNPYQGIKLLKVPRTKVEPFTLDEVKAVLDGVRED-FH 215 Query: 178 NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKP 237 V +TG+R GE+ L W+ ID K +++R + T KT+ + R I + Sbjct: 216 AYMTVRFFTGMRTGEIHGLKWKYIDFKQRMILVRESYVAGAMTDTKTEE-SARDIPMSDE 274 Query: 238 AIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI- 296 AL++Q T K VF G+ +++++ Sbjct: 275 VYAALKAQHKRTG--------------------KLDLVF-------CTGSGEPLSINNVC 307 Query: 297 RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 +++W + + R YQ+RHT A L AG NP ++A +GH+D+ + + Y +W+ Sbjct: 308 KRVWYPLLALLKIPKRPPYQTRHTAATLWLAAGENPLWVAQILGHSDSAITHKRYARWIP 367 Query: 357 ENNNA 361 Sbjct: 368 NLTRQ 372 >UniRef50_D1CFY4 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFY4_THET1 Length = 363 Score = 238 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 84/328 (25%), Positives = 137/328 (41%), Gaps = 33/328 (10%) Query: 34 ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVR 92 AR +T+ E +L + + +V +L Y+ ++ +I+ +G L + L E+ Sbjct: 55 ARTRVTVAEFLSHWLEIIKPQVRPATLADYQNSVRNHIVPALGTIKLTK-LEPAHLQELY 113 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 +LL G SA TV N ++ + G L N P K S Sbjct: 114 SQLLA-------------KGLSAKTVRNIHGTIHKAIKDAARWGMLPRNVADIARPPKVS 160 Query: 153 RTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 R L+ E+ L+ AC + + L +++ TG R GEL L W DIDL+ G + I R Sbjct: 161 RQELQCLTPEQVRLLMQACAGTRYEPLLGLAIATGARQGELLGLRWADIDLQRGVVQITR 220 Query: 213 NLAK-DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 L + F+ PKT +G R +H+ ++ LR +L + D Q Sbjct: 221 QLTRQGTFSEPKTSSGK-RSVHVPVSTVELLRRHRSLQLQERLSAGD---------RWQD 270 Query: 272 CTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGAN 331 VF + G ++ + W +++AGL + RHT A L G + Sbjct: 271 QGLVFANTL-------GGPMDARNLIRAWHRILQQAGLPRMPFHSLRHTSASLLLRQGVS 323 Query: 332 PAFIANQMGHADAQMVFQVYGKWMSENN 359 P I ++GHAD + QVY + + + Sbjct: 324 PRLIQQRLGHADIAVTLQVYAHLVEDMD 351 >UniRef50_C1D584 Phage integrase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D584_LARHH Length = 416 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 97/378 (25%), Positives = 177/378 (46%), Gaps = 52/378 (13%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNL---EKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 R+++ AI+ G F YA FP S+ ++ A+ T+ ++L E + ++L Sbjct: 51 RAAILAAIENGTFVYAVTFPHSKKAVLAKRTPVAKYGKTLDAWMSEWLKRCERYLKSSTL 110 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 + Y+ I + L+ ++ ++++ + + + S + N Sbjct: 111 HDYK--------TIAWRQLSPVFGNHQIGDIKRSDIRAWCDGLT--------CSNKRIAN 154 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI---PDPLSREEFIRLIDACRNQQAK 177 ++ A +D+ + NP G + + DP + +E +++A Sbjct: 155 ILSVFRASLTAAMDDELIDTNPLSGWTYRRREEVKEDDIDPFTPDEQTAILEALPEAGC- 213 Query: 178 NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK--DRFTVPKTQAGTNRVIHLI 235 N+ + +TG+R EL AL W+DID G + I + L + + PKT+A + R + L+ Sbjct: 214 NMIRFAFWTGLRTSELVALEWKDIDWVGGKVSISKALTQRATKAETPKTRA-SRRFVTLL 272 Query: 236 KPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVD- 294 +PA++AL +Q +T F E+GR T G+ +T D Sbjct: 273 QPALEALMAQKAVT----------FFSEHGRVWIDPRT--------------GEPWTGDQ 308 Query: 295 SIRQ-MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGK 353 +IR+ +W A++RAG+R+R+ YQ+RHT+A L+AG +P ++ANQMGHA M+ +VYG+ Sbjct: 309 AIRKTLWTPALRRAGVRYRRPYQTRHTFASMMLSAGESPVWVANQMGHASWTMIARVYGR 368 Query: 354 WMSENNNAQVALLNTQLS 371 W+ +N S Sbjct: 369 WIPNGDNGDGQKAVKAFS 386 >UniRef50_C8VWS4 Integrase family protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWS4_DESAS Length = 381 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 77/386 (19%), Positives = 143/386 (37%), Gaps = 42/386 (10%) Query: 6 SVCYAIKTGVFDYAKQ---FPSSRNLEKFGEAR------------QDLTIKELAEKFLAL 50 S+ Y I G K F + + E R + T+++ ++ Sbjct: 13 SIVYDINQGGKRKQKWESGFKTKKEAEAILAQRINEIEKGTYINPKKDTLEDYLIRWFDT 72 Query: 51 KETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVT 109 + +++ ++ Y +IK +++ +G LA + ++ E + L G + N Sbjct: 73 HKADLSPSTARRYEGIIKQHLIPSLGNIPLAK-LQPLQIQEFLSKELEGGRQD--NKKTV 129 Query: 110 QPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLID 169 G SA +VN L+ VD ++ NP + K + LS ++ RL++ Sbjct: 130 GAGLSAASVNYEYRVLHKALNQAVDWQLISRNPADLVKVPKPEKKDMVVLSEQDIARLLN 189 Query: 170 ACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR-----FTVPKT 224 ++ +++YTG+R GE+ W+DIDL G + +R+ + + F PKT Sbjct: 190 EIKDNYLYIPTFLAIYTGMRLGEVLGSTWKDIDLNRGILSVRQASCQVKADDPEFKAPKT 249 Query: 225 QAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARV 284 A + R I + + + LR ++ + Q V Sbjct: 250 -AKSKRNIDISQTVVKTLREHKKTQT---------KWKLVAGSNWQDNNLVC-------A 292 Query: 285 KNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADA 344 G S+ + R GL + RHT+A L AG P + ++GH+ Sbjct: 293 LQDGRPINPPSLSSYFRRVASRIGL-FVSFHALRHTHASLLLKAGIQPKIVQERLGHSTI 351 Query: 345 QMVFQVYGKWMSENNNAQVALLNTQL 370 + +Y M L+ L Sbjct: 352 AVTMDIYSHVMPGMQRQAANKLDDML 377 >UniRef50_A6GR01 Phage integrase n=3 Tax=Proteobacteria RepID=A6GR01_9BURK Length = 450 Score = 234 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 104/402 (25%), Positives = 170/402 (42%), Gaps = 64/402 (15%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQD------------------------ 37 + + + IK G F Y FPSSRNLEK + Sbjct: 3 RVMAGIVAEIKKGTFRYRSAFPSSRNLEKIEALETEQYQPTSPMVSIPMANQSVRQAVDN 62 Query: 38 ------LTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEV 91 T E A+KF+ E+ ++++ T R +++ L K + SSI K+ LLE Sbjct: 63 ISSSGHPTFTEFAQKFIEENESLWKRSNIRTKRDILEKWLIPQFGKRVISSITKQDLLEF 122 Query: 92 RKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE 151 R L K+ SA +N+ MT++ V D + P++ I ++ Sbjct: 123 RSVL------AKAPGKKPGTTMSASRINHVMTSVKQVLDEAADR-FNFTTPYQNIKRMRI 175 Query: 152 SRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 +T P + EE +I CR ++ + V +TG+RPGE+ L W+ ID + + IR Sbjct: 176 KKTDVTPFTIEEVEMIIKYCRED-FRDYFTVKFFTGMRPGEIHGLKWKYIDFEKRLITIR 234 Query: 212 RNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 + D PKT A +NR I + +AL++Q +T K Sbjct: 235 ETIVDDYEETPKT-ADSNRDIQMAPQVYEALKAQWGVTGT-------------------K 274 Query: 272 CTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGAN 331 +VF + N + ++W ++ GL+ R YQ+RHT+A L AG + Sbjct: 275 SPYVFANCNGGPLTN------RNMSNRVWYPMLRSLGLKLRTPYQTRHTFATLMLAAGES 328 Query: 332 PAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEF 373 P +IA QMGH+ +M+F+VY +++ + L+ Sbjct: 329 PEWIAFQMGHSSTEMLFKVYSRYVPNLTRRDGSAFERMLAAN 370 >UniRef50_B8I354 Integrase family protein n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I354_CLOCE Length = 413 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 77/371 (20%), Positives = 152/371 (40%), Gaps = 20/371 (5%) Query: 22 FPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLA 80 F + E + +T+ E E +L K+ + + Y ++K +L ++G+ + Sbjct: 55 FEEEVKSGSYYEPTK-MTMSEFIELWLDKKKNNIESKTHQGYSGLLKGRVLKVMGDTKII 113 Query: 81 SSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLAD 140 + L+ + L + S ++ +Y LNA+F GV G + + Sbjct: 114 D-LKPLHLINFYENLQELGIREDGR----EGKLSTNSILHYHRALNAMFGDGVRWGLIKE 168 Query: 141 NPFKGISPLKESRTIPDPLSREEFIRLIDACRNQ--QAKNLWCVSVYTGVRPGELCALGW 198 NP + P K + L ++ +LI A N+ + + TG+R GELC L W Sbjct: 169 NPCSKVRPPKVVKKEMSCLDEDQIPQLISALCNEPIDISTFITLDLVTGLRRGELCGLQW 228 Query: 199 EDIDLKNGTMMIRRNLAKD-----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSK 253 ++++LK+ T+++ + ++ PKT+ + R I + K D L K Sbjct: 229 DNVNLKDNTIVVEQAVSYTPETGTIIKTPKTK-SSIRKITIPKTTSDLLSIYRKWWLEQK 287 Query: 254 EHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRK 313 + D +++ R E +K ++ G D++ + + IKR L + Sbjct: 288 IKVGD-QWQKSAREEVEKNGQTWEDPEYLFTTWDGYVMHPDTLTKTFKKFIKRNNLPDIR 346 Query: 314 SYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEF 373 + RHT A + AG N +A +MGH + + +Y + + ++ + + Sbjct: 347 LHDLRHTAATMLIHAGLNIRAVAARMGHENPNVTLAIYSHALLSADKQAADVMGNLIKK- 405 Query: 374 APTMPHNEAMK 384 P NE ++ Sbjct: 406 ---KPQNEKVE 413 >UniRef50_C6MG53 Integrase family protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MG53_9PROT Length = 361 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 94/356 (26%), Positives = 166/356 (46%), Gaps = 44/356 (12%) Query: 6 SVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDL-TIKELAEKFLALKETEVAKTSLNTYR 64 S+ Y IKTG FDY + FP S+ ++F + R DL TIKE +L + ++ ++L Y Sbjct: 48 SIKYEIKTGTFDYNRHFPYSKKAKEFRKNRPDLYTIKEALISWLQRNQAKLQLSTLQDYN 107 Query: 65 AVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 + I +++ G + S + K+ E EL S +N +T Sbjct: 108 SAIYHHLIPTFGNLTI-SELTASKVKEWLSELP----------------CSNKRKSNILT 150 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVS 183 L +F+ + + NP + L P+P ++EE I++++ Q AKNL + Sbjct: 151 PLRQMFEELYLDEIIDKNPLSRVKNLPNKTREPEPFTQEEIIKILNELTGQ-AKNLIQFA 209 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALR 243 Y+G+R EL AL W++++ + + I++ + + KT++G R + L A +AL Sbjct: 210 FYSGLRTSELIALCWKNVEFEQNRIFIKQAHVRGQLKDTKTKSGK-REVTLQPQAKEALL 268 Query: 244 SQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAA 303 +Q T + VF + + + +W A Sbjct: 269 NQQAFTGKQNQI-------------------VFHNPKTKQPWKNDQPIR----KNVWIPA 305 Query: 304 IKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 +K+AG+++R YQ+RHT+A L+ G ++A QMGH D M+ +VYG+W+ ++ Sbjct: 306 LKKAGIKYRNPYQTRHTFASMLLSRGEKLLWVAQQMGHKDWGMIIKVYGRWIPQSK 361 >UniRef50_B1VP49 Putative phage integrase n=1 Tax=Streptomyces griseus subsp. griseus NBRC 13350 RepID=B1VP49_STRGG Length = 423 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 86/373 (23%), Positives = 134/373 (35%), Gaps = 35/373 (9%) Query: 31 FGEARQDLTIKELAEKFLALKETE-VAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKL 88 A + + +LA E + +LN+Y + + I +G+K L + ++ + Sbjct: 61 IPAASSTMAFGDYLTYWLATIAPERLKPATLNSYEGLSRLYIRPALGKKRL-NRLSPADV 119 Query: 89 LEVRKEL-------LTGYQIPKSNYIVT--------QPGRSAVTVNNYMTNLNAVFQFGV 133 E L G + T + SA TV L + Q + Sbjct: 120 RRFLAEFKAACLCCLRGADEERPEDKRTCCAVGRCCKRRPSARTVQYIHAVLRSALQQAI 179 Query: 134 DNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGEL 193 +A N + + PL E L+ R + LW + V TG+R GE Sbjct: 180 REELIARNVARIVETPTVEPKEVRPLDAAEVRLLLKTARPHRLYALWLLLVSTGLRRGEA 239 Query: 194 CALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLT 249 L W D+DL GT+ +RRN+ + R F PKT + R I L K + AL + Sbjct: 240 LGLTWADVDLTAGTLRVRRNVQRIRRELIFGTPKTMR-SVRTISLPKSCVQALTAH---- 294 Query: 250 RLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGL 309 R +E V ++ +T Q VF G S+ +M + A + Sbjct: 295 RTQQEREQKVAGAKWQQTPGQPAGLVFTTLT-------GRVTDPRSLNRMLTILCRDAKV 347 Query: 310 RHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQ 369 R + + RHT A L G + I +GH+ M Y M A ++ Sbjct: 348 RRVRVHDLRHTCASLLLAQGVDARTIMETLGHSTITMTLDTYAHVMGSTLRAAAEQMDDA 407 Query: 370 LS-EFAPTMPHNE 381 L E P E Sbjct: 408 LGLEDVDDDPEGE 420 >UniRef50_B9MR26 Integrase family protein n=2 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MR26_ANATD Length = 400 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 83/352 (23%), Positives = 141/352 (40%), Gaps = 46/352 (13%) Query: 39 TIKELAEKFL-ALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLT 97 T+K+ +L K+ + ++ Y I E+++ +I KL ++R E L Sbjct: 73 TLKDWLNTWLWEYKKQTLRPSTFKDYLCYI--------ERHINPAIGHYKLKDLRPEHLQ 124 Query: 98 GYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK-ESRTIP 156 K Q G S T+ T L++ + NG + N + + K + + Sbjct: 125 ALYNAKY-----QEGLSISTIKQIHTVLHSALDQALKNGLVNRNVSEATTLPKGKPKREI 179 Query: 157 DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK 216 LS EE R I A ++ K + V + +G+R GEL AL W+D++ K+G + +RR+L + Sbjct: 180 RILSLEEQQRFIAALEGERLKTAFLVELASGLRIGELLALRWKDVNFKDGYIEVRRSLQR 239 Query: 217 DR-------------FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFRE 263 R F PKT+AG R++ L I+ L+ R+ Sbjct: 240 VRIFDGGNSKKTALAFQEPKTEAGK-RIVPLPPVIIEELKQH----------------RK 282 Query: 264 YGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGL-RHRKSYQSRHTYA 322 EK K +++ G + +++ ++AGL + + RHTYA Sbjct: 283 KQLEEKLKAGALYEDNDLVFATELGTPIDPRNFERLFYRIREKAGLDKSVNFHALRHTYA 342 Query: 323 CWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFA 374 L A +P + +GH D +Y M E A LN+ Sbjct: 343 TRLLEANEHPKVVQELLGHKDISTTLNIYSHVMPEIKKAAAMKLNSLFENIK 394 >UniRef50_A8HM00 Phage integrase n=5 Tax=Proteobacteria RepID=A8HM00_BURPS Length = 411 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 97/396 (24%), Positives = 169/396 (42%), Gaps = 56/396 (14%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLE-KFGEARQDLTIKELAEKFL-----ALKETEV 55 LR + I+ G F+Y + FP S+ + ++T+ E + F+ A+ +T + Sbjct: 51 RLRGEILRKIEMGTFNYGEYFPESKRAATPRAASPSEVTVGERLDDFMTQARKAVAKTRM 110 Query: 56 AKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSA 115 + ++L YR V+ + L +L++VR L + ++ + Sbjct: 111 SPSTLEGYRKVV--------DGRLRPRWGAVRLVDVRPADLRKW--------ISDLDVTL 154 Query: 116 VTVNNYMTNLNAVFQFGVDNGYLADNPFKGI-------SPLKESRTIPDPLSREEFIRLI 168 T N + L +V +++ + +NP I + S DP S +E ++ Sbjct: 155 KTARNILGPLGSVLADALNDELIDENPLTKIDVRKLLSKTTRPSDYEVDPFSIDEIRAIL 214 Query: 169 DACRNQQ----AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKT 224 A A+NL+ + ++G+R EL AL W +DL G + +R KT Sbjct: 215 AAADELYPGGAARNLFQFAFWSGMRTSELIALDWLHVDLNAGVVRVRNAQVVGTMKTTKT 274 Query: 225 QAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARV 284 +AG R + L+ A AL +Q +TR E+ R VF R Sbjct: 275 KAGL-RDVLLLPSARAALEAQREVTR----------GMEHNR--------VFVVPWHGRP 315 Query: 285 KNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADA 344 + V+ W +K+A +R+R YQ+RHT+A L+ G NP ++A QMGH D Sbjct: 316 WSGDKQIRVN----CWTYVLKKAEVRYRNPYQTRHTFASMLLSRGENPLWVAQQMGHVDT 371 Query: 345 QMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHN 380 +M+ + YGKW+ +++ +FA P + Sbjct: 372 EMITKTYGKWIPDSSATGGYKPLNAWDDFAGAAPKS 407 >UniRef50_B7DTD1 Integrase family protein n=2 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DTD1_9BACL Length = 379 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 65/344 (18%), Positives = 128/344 (37%), Gaps = 36/344 (10%) Query: 34 ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVR 92 A + T++ +L K ++V ++ Y +++ +I+ +G L S + + L + Sbjct: 58 AENNDTVETYLRNWLEDKRSQVRPSTYRGYEWLVRVHIIPHLGGIEL-SDLRPQHLQALY 116 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 ++L + S T+ + L+ V G +A N + P + Sbjct: 117 RKLQS-----------LDKPLSNRTILHIHLLLHEALDRAVKWGMVARNVADAVDPPRPE 165 Query: 153 RTIPDPLSREEFIRLIDACRNQ--QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 + E+ + A + + ++V TG+R GE+ L W +ID + + I Sbjct: 166 VRRSIVWTPEDVRAFLSANEEAEARYYAAFVLAVMTGMRKGEILGLRWSEIDWDSAVVRI 225 Query: 211 RRNLAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 + L + PKT + R + L I ALR H + R Sbjct: 226 NQTLTWTKQGPILQEPKTDR-SRRSVALSPETIVALRRH---------HALQAQERLLYG 275 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL 326 TE + VF + G+ ++ W A+KRA + + + RHT+A L Sbjct: 276 TEYKDHDLVF-------ARPNGEPLHPRTLDNAWYRALKRANVPRIRFHDLRHTHASLLL 328 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 G +P ++ ++GH+ + Y + + + Sbjct: 329 AQGVHPKIVSERLGHSTINITLDTYSHVLPGLQKQVADRFDEVI 372 >UniRef50_Q1ZMG0 Phage integrase n=2 Tax=Photobacterium RepID=Q1ZMG0_PHOAS Length = 391 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 113/385 (29%), Positives = 178/385 (46%), Gaps = 52/385 (13%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFG-------------EARQDLTIKELAEKFLA 49 L + + I G F+Y K F S+ EKF A + E A+ +LA Sbjct: 41 LANKIEAEITLGCFEYQKYFSQSKLCEKFRAMEHRERASSQYYNAPYSPNLAEFADIWLA 100 Query: 50 LKETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIV 108 K+ E +K VI K +L G + + SSI K+K+L+ R +L+ K Y Sbjct: 101 EKKIEWSKGHYIDVSGVIEKYLLPAFGNQKI-SSITKQKILKFR-SILSQVPGRKGEY-- 156 Query: 109 TQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLI 168 S+ +N+ MT L + D Y ++P+K I LK SRT+ DP +E + Sbjct: 157 ----LSSSRINHIMTPLRQLLNEAADR-YDFNSPWKNIKALKVSRTVIDPFHLDEVESFL 211 Query: 169 DACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGT 228 +A + K + +TG+R GE+ L W+DIDL N T+ +++ L+++ KT+ + Sbjct: 212 NAVPDA-YKTYYTTRFFTGMRTGEIDGLQWKDIDLVNKTIKVKQALSRNELKELKTE-SS 269 Query: 229 NRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYG 288 R I LI ID L +++ R++ TFVF + + G Sbjct: 270 YRDIDLIDRVIDVL-------------------QKHKRSKYTTSTFVF-------INSKG 303 Query: 289 DHFTVDSI-RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 F + R +W + AGLRHR YQ+RHTYA L +G +P +IA QMGH+ M+ Sbjct: 304 KPFCYPVVSRTIWYPTLDAAGLRHRNPYQTRHTYATLLLASGESPEWIAKQMGHSTTTML 363 Query: 348 FQVYGKWMSENNNAQVALLNTQLSE 372 F+VY +++ + L+ Sbjct: 364 FRVYSRFVPNLTRRDGSAFEKFLNN 388 >UniRef50_B0KSD4 Integrase family protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KSD4_PSEPG Length = 417 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 116/366 (31%), Positives = 184/366 (50%), Gaps = 20/366 (5%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNT 62 LR+++ + IK G F+Y + FP+S++ + A+ D ++ LAE++ LK ++ + Sbjct: 57 LRAAILHEIKLGTFEYGRHFPNSKHATNYSNAK-DERLEALAERYKPLKAIDITPMTEEK 115 Query: 63 YRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 Y I ++++G LA + E + +R L+ R+ T N+Y+ Sbjct: 116 YAYAIDICVALVGGDRLAGILLPEDIHVLRARLIET--------------RAPSTANHYL 161 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLI-DACRNQQAKNLWC 181 + N Y + S PDPL+ +EF LI + C + Q Sbjct: 162 ATFAGFLTWCESNNYCMAGLAGACTRFAMSDKEPDPLTHDEFDLLISNGCLHPQDAAAIT 221 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR-FTVPKTQAGTNRVIHLIKPAID 240 ++VYTG+RPGELCAL EDI+L+ G + I R + D F PKT G R + L++PA++ Sbjct: 222 LAVYTGLRPGELCALAVEDINLQAGKIEITRAITADGSFKTPKT--GKPRTVLLMEPALE 279 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 A R+ + + + I V+ + E T + P AR + + F + W Sbjct: 280 ACRTLLEIVMNHPKRDIRVYQNRHEWREI-SVTPLLSPSTQARKRGINEWFVSTAWNTKW 338 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 A +RAG+R R+ YQ+RHTYACW LTA N AFIA QMGH D M+ +VY KWM ++ Sbjct: 339 AAIQRRAGIRPRRPYQTRHTYACWCLTARGNLAFIAKQMGHKDFTMLVEVYAKWMDSESD 398 Query: 361 AQVALL 366 ++ + Sbjct: 399 EELTRI 404 >UniRef50_B9MQ70 Integrase family protein n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MQ70_ANATD Length = 325 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 71/346 (20%), Positives = 132/346 (38%), Gaps = 44/346 (12%) Query: 38 LTIKELAEKFLA-LKETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKEL 95 LT + + ++ + ++ T+ ++Y +I K+I +G L +++ + E L Sbjct: 11 LTFSQWLDIWMNQFMKIKLRPTTYSSYIQLINKHIKPKLGHIQL-QNLSPLAIQECYNSL 69 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 L S TV N +++ + + GY+ N + ++ K R Sbjct: 70 LL-------------ENLSPKTVKNIHVIIHSALKQAIKCGYINQNVSEAVALPKVERPE 116 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 LS E+ + A + + + +YTG+R GEL L W+DID N T+ ++R+L Sbjct: 117 IKTLSSEQVTTFLQAAQTDSLYPAFLLELYTGLRRGELLGLKWDDIDFDNCTIHVKRSLV 176 Query: 216 KDR----------FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 + PKT+AG RVI + + L+ + E+ Sbjct: 177 RVYDHNLKKTTLLLQPPKTKAG-YRVIPIPDFVVAELKE---------------LYEEHQ 220 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWS 325 R + + F V G + + + +K+A L + + + RHT A Sbjct: 221 RIKLSQPN--FNSLNLMFVTTQGTPIDPRNFERKFKQLLKKANLPNIRLHDLRHTVATLL 278 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 L +P + +GH D +Y E + L L+ Sbjct: 279 LQQNVHPKIVQEILGHRDISTTLDIYSHVNIELKKKATSCLVEILN 324 >UniRef50_C1SH28 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SH28_9BACT Length = 410 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 87/357 (24%), Positives = 162/357 (45%), Gaps = 51/357 (14%) Query: 10 AIKTGVFDYAKQFPSSRNLEKFGEARQDL-TIKELAEKFLAL-----KETEVAKTSLNTY 63 AI G F+YA+ FP+S+ F R+ T E+AE++ K E+ +T+L Y Sbjct: 55 AILDGNFEYAEWFPNSKKCRLFNSVRKSHKTFAEVAEEWKEHVERLHKAGELKRTTLRNY 114 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 +K+IL ++ + K L+ Y+ + S ++NN +T Sbjct: 115 MNSLKSILDYFA---------IYEMQNITKSLVDDYKFE-----LLDKPLSKKSINNKLT 160 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACR--NQQAKNLWC 181 L +F + + GY+ N + +P ++ E +++ + N + ++ Sbjct: 161 PLRRIFDYAYEMGYIEHNVMDRVKNFTLELPEIEPFNQLEVQAILNHLQKNNPKFHAMFT 220 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDA 241 + +TG+R GE+ A+ W++ D + ++ + + R PKT+A + R++ L A+ A Sbjct: 221 ILFHTGMRIGEVLAMKWKNFDEMFCSYHVKEHFTEKRLDTPKTKA-SKRIVPLTDEAMKA 279 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHF--TVDSIRQM 299 LR+ T + K F+F YGD + + + ++Q+ Sbjct: 280 LRNHKQYTFM-------------------KSDFIF-------CNQYGDPWVSSDNIMKQV 313 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 W+ +K+ G+ +R YQ RHT+A S+ AG N A IA +MGH + + Y K++ Sbjct: 314 WEPMLKKLGIAYRIIYQCRHTHASLSILAGDNLAHIAERMGHKNVGTLITRYAKYVK 370 >UniRef50_D1C8V1 Integrase family protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8V1_SPHTD Length = 376 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 72/341 (21%), Positives = 132/341 (38%), Gaps = 36/341 (10%) Query: 36 QDLTIKELAEKFLA-LKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKE 94 + T+K+ E++L + + + +YR +I ++L ++ + +L + + Sbjct: 65 ERETVKDYLERWLEDVARPSLRPRTYESYRGIIT--------RHLTPALGRTRLARLSPD 116 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRT 154 + Y K G S TV + L + G ++ N +P K+ R Sbjct: 117 QVQRYINQK-----QAAGLSPRTVTYHRAVLRKALNDAMRWGLVSRNAAALAAPPKQDRP 171 Query: 155 IPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL 214 L+ EE +D + + L+ V++ G+R GE L W+D+DL+ GT+ +R L Sbjct: 172 PARFLTPEEARHFLDTVAGHRLEALFTVALAVGLRQGEALGLRWDDVDLEAGTLTVRYAL 231 Query: 215 AKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQ 270 + PKTQ + R + L A+ ALR TR +E I ++ + G Sbjct: 232 QRSGGALVLVEPKTQR-SRRTVALPAVALRALREHR--TRQLEERIAAPYWDDQG----- 283 Query: 271 KCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGA 330 FVF + G ++ + + AGL + + RH A + G Sbjct: 284 ---FVFTSTI-------GTAIDARNLTREFHRLRAEAGLPWLRFHDLRHGCASLLMAQGV 333 Query: 331 NPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 NP + +GH+ + Y ++ L Sbjct: 334 NPRVVMEILGHSQITLTLGTYSHVAPTLARDAADKIDGILG 374 >UniRef50_C1SH90 Site-specific recombinase XerD n=2 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SH90_9BACT Length = 399 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 94/370 (25%), Positives = 157/370 (42%), Gaps = 50/370 (13%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEAR--QDLTIKELAEKFLALKETEVAKTSL 60 L S + I F Y FP S+ + + + D+ AE +L+ E+ VA ++ Sbjct: 50 LLSEIERKIAEKTFKYETYFPDSKYVRENQQLHLNSDMFFDTYAELWLSSIESSVAYSTY 109 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 TY + L+S ++ KL E++ + Y ++ SA T+ N Sbjct: 110 KTYSTAVS---------KLSSYFSRFKLSEIKPSHIQQY--------ISNSELSAKTIAN 152 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKN-- 178 Y+ +++F+ V + L+ NP K + + DP S EE ++D R Sbjct: 153 YLGVFHSIFESAVRDDLLSKNPCKHVKKPRVQTEKVDPFSIEEVSMILDWMRQHHPHMTI 212 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPA 238 ++ + YTG+R GE AL W DID K+ ++++R + K+R T+ RVI +I Sbjct: 213 IFALGFYTGMRVGEAIALKWSDIDFKHHKIIVQRTITKNRIKES-TKTADYRVIDIIPML 271 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDS--I 296 + L Q + F V +YG+ FT Sbjct: 272 DEYLHFQK--------------------------QYTFMKSEWVTVTSYGEPFTKTQNIT 305 Query: 297 RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 + +K GLR+R Q RH++AC L A +I N +GH+ QM+F+ YG ++ Sbjct: 306 EDYFKPCLKALGLRYRILNQMRHSFACMMLDAREEINWIKNMLGHSSLQMLFRKYGNRIN 365 Query: 357 ENNNAQVALL 366 N+ + LL Sbjct: 366 RNDGTRKGLL 375 >UniRef50_B0PGN2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PGN2_9FIRM Length = 526 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 72/372 (19%), Positives = 146/372 (39%), Gaps = 36/372 (9%) Query: 7 VCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLNTYRA 65 V K + KQ + K + R ++ E + + + ++ T+ Y A Sbjct: 39 VLAKTKRECQEKLKQLRETMTGSKTEKVRPEMPFGEWLDFWYQNYVKPQIRPTTQANYEA 98 Query: 66 -VIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTN 124 + ++I+ +G+ L + + ++ L + + T ++ ++ G S V Sbjct: 99 KIYQHIIPELGKIPL-NQLAQKDLQQFYARMKTAGRLIRTEQFG--KGLSDSMVRGLHAA 155 Query: 125 LNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSV 184 + + V G + NP G + L REE R + + + L+ + + Sbjct: 156 CRSALEKAVQEGLIRTNPAVGCKLPPKRGREMQVLGREELQRFLIQAQAEGYFELFLLDL 215 Query: 185 YTGVRPGELCALGWEDIDLKNGTMMIRRNL----AKDRFTVPKTQAGTNRVIHLIKPAID 240 TG+R GEL AL W+D+D + G + + + + + + +VPKT+A R++ L ++ Sbjct: 216 CTGLRRGELLALQWDDLDFRTGALTVNKQVYEVKGRLQVSVPKTRASIRRLV-LPPGVVE 274 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 LR+ E ++F V V T ++R+ Sbjct: 275 VLRAYR---------------------ETVDSRWMFPSPVKEDV-----PMTPGAVRRRL 308 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 ++RAG + + + RHT+A SL G + ++ +GH A +Y + + Sbjct: 309 QIILERAGCKRIRFHDLRHTFATLSLENGMDVKTLSAMLGHVSAATTLDIYTHVTGDMQS 368 Query: 361 AQVALLNTQLSE 372 A ++ L Sbjct: 369 EAAAKIDRGLGN 380 >UniRef50_A9BYB6 Integrase family protein n=2 Tax=Comamonadaceae RepID=A9BYB6_DELAS Length = 375 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 91/382 (23%), Positives = 163/382 (42%), Gaps = 47/382 (12%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLN 61 +R+ + I+ G F FP S +T+ +L ++L +K+ E+ ++++ Sbjct: 39 RMRAEILGKIERGTFVLGDYFPDSPRA---RADVPSMTVGQLFGEWLDVKKPELQHSTIH 95 Query: 62 TYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 +Y+ I+ VR++L+ + ++ + + T NN Sbjct: 96 SYQQT----------------IDSYHFDGVRRDLVGNFTFRSLKRLLARLPANPKTFNNV 139 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWC 181 + L V ++G L + + I + + PDP + +E L+ + + A+N + Sbjct: 140 ASVLRQVLEYGYKAKILTEPLHESIEMRRRQKPEPDPFTLDEVEVLLSKMKAEAARNYFE 199 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDA 241 + ++G+RP EL AL W +DL++GT+M+ L + R KT R + L A DA Sbjct: 200 FAFFSGLRPSELIALTWSKVDLRSGTVMVDSALTRGRVKGTKT--SEVRKVELPGRARDA 257 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWD 301 L Q +++L+ VF ++N W Sbjct: 258 LERQRKVSQLAGGR-------------------VFLTVAGGELENTDMPLD-----SWWK 293 Query: 302 AAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE-NNN 360 A+K +G+RHR + Q+RHTYA L AG PA+ A QMGH +M + Y KW+ + Sbjct: 294 PAMKVSGIRHRDARQTRHTYATMMLMAGVTPAYAARQMGHG-IEMFLRTYSKWIDGADKG 352 Query: 361 AQVALLNTQLSEFAPTMPHNEA 382 A+ L++ +S P Sbjct: 353 AEQRKLDSFISASKPKAGTQTG 374 >UniRef50_C6DJ77 Integrase family protein n=4 Tax=Enterobacteriaceae RepID=C6DJ77_PECCP Length = 255 Score = 226 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 125/259 (48%), Positives = 174/259 (67%), Gaps = 9/259 (3%) Query: 116 VTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQ 175 TV+NY+ L ++ +F +G+++ PF+GI L++SR PDPL + EF +LI + Q Sbjct: 2 RTVDNYIALLCSLLRFAHRSGFISGRPFEGIKKLQKSRPRPDPLLKHEFDQLIGSLSGQ- 60 Query: 176 AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-KDRFTVPKTQAGTNRVIHL 234 +KNLW ++VYTG+R GEL AL WEDIDL G + I RNL F PKTQAG R + L Sbjct: 61 SKNLWQLAVYTGLRHGELAALAWEDIDLDAGVIHISRNLTILGHFGPPKTQAGI-RTVTL 119 Query: 235 IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVD 294 +KPA++AL+SQM T + + I H REYG TE Q+ FVF P RV+N + Sbjct: 120 LKPALEALQSQMKTTGNKRTNDIVYHHREYGLTEIQRLRFVFLP----RVRNGEQKISYS 175 Query: 295 --SIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYG 352 ++ +W+ A+KR+G+R R Y +RHTYACW L+AGANP+FIANQMGH +AQMV+++YG Sbjct: 176 CGTMGSLWNTAVKRSGIRRRNPYHTRHTYACWLLSAGANPSFIANQMGHENAQMVYEIYG 235 Query: 353 KWMSENNNAQVALLNTQLS 371 KW+ + N QV +LN +L+ Sbjct: 236 KWIEDMNEDQVGMLNRKLA 254 >UniRef50_Q3Z840 Site-specific recombinase, phage integrase family n=6 Tax=Bacteria RepID=Q3Z840_DEHE1 Length = 435 Score = 226 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 75/356 (21%), Positives = 139/356 (39%), Gaps = 31/356 (8%) Query: 36 QDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 L+ E E + +T+ T+ + +NI+ ++ ++ K L E+ ++ Sbjct: 62 SKLSFGEWLENWCRDYVK--IQTTQRTFESYYQNIIG-----HIEPALGKVILTELTPQI 114 Query: 96 LTGYQIP--KSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 + Y + + G SA +V ++ + G + NP + P + + Sbjct: 115 IQAYYARQLEKGRADGKGGLSARSVLYQHRIISKCLKQATKLGLIMRNPADAVEPPRPRK 174 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 T ++E RL+DA +C+ +Y G+R GE AL W+DIDLK T+ I Sbjct: 175 TAISVPDKDELPRLLDAFETTPYYVFYCLLLYCGMRRGEALALRWKDIDLKQDTIQIAET 234 Query: 214 -----LAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTE 268 + PKT + R I + M L L + ++ + G E Sbjct: 235 AFTLRSGEYVIKEPKT-PHSRRCIDIPPT--------MKLLLLEYKADQTAYYAKLG-VE 284 Query: 269 KQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTA 328 FVF + G+ +++ + A+++AG + + RH +A L A Sbjct: 285 LGLHDFVF-------TRPNGEPLNPNTVTHTFLKAVRKAGFDKLRLHDLRHLHATLMLQA 337 Query: 329 GANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNEAMK 384 G +P ++ ++GHA + Y M V + + LS ++ N K Sbjct: 338 GIHPKIVSERLGHASINITLDTYSHVMPGLQKKAVNVFDKMLSANEESLEENSVSK 393 >UniRef50_A3D4Z5 Phage integrase family protein n=3 Tax=Shewanella RepID=A3D4Z5_SHEB5 Length = 392 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 94/385 (24%), Positives = 169/385 (43%), Gaps = 46/385 (11%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQ---------DLTIKELAEKFLALKE 52 +L + +K G FDY FP+S +E F + + + A +L K Sbjct: 40 KLLLMLEQQMKAGSFDYRHHFPNSPKVEHFTQLAKLSQFHAAGGRMLFSAFANLWLDEKR 99 Query: 53 TEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQP 111 E + + T +++ +++ +G K +A+ I K+ +L +R L +T Sbjct: 100 VEWRASQIETVEGILRCHLIPAMGTKMIAT-ICKQDILGLRLSLCE-------VDALTNR 151 Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC 171 SA +N+ MT L + + + P++ I L RT P S E R+I++ Sbjct: 152 SLSASRINHIMTYLRLILNEAAER-FGFQTPWRNIKALPMPRTDIQPFSLVEVYRIIESV 210 Query: 172 RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRV 231 R+ + + V +TG+R GE+ L WE+ID N + IR++L + + KT + ++R Sbjct: 211 RDD-FRPYYTVRFFTGMRTGEIDGLTWENIDFTNRLIHIRQSLVRGSLGLTKT-SSSDRA 268 Query: 232 IHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHF 291 I + +P +AL++Q LT++ + FVF + Sbjct: 269 IAMNQPVYEALQAQSELTKI-------------------RGKFVFCNRRGDALS------ 303 Query: 292 TVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 + +++W ++ L R YQ+RHT A L AG +P +IA Q+GHA+ M+F+VY Sbjct: 304 HQNVTKRVWYPLLESLALEKRNPYQTRHTAATLWLAAGESPEWIARQLGHANTGMLFRVY 363 Query: 352 GKWMSENNNAQVALLNTQLSEFAPT 376 +++ A + Sbjct: 364 SRYVPNLLGQDGAAFERLIGNGPKG 388 >UniRef50_A8L4Q7 Integrase family protein n=9 Tax=Actinomycetales RepID=A8L4Q7_FRASN Length = 477 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 64/343 (18%), Positives = 126/343 (36%), Gaps = 35/343 (10%) Query: 34 ARQDLTIKELAEKFLALKETE-VAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEV 91 + T+ ++L +KE + ++L YR +I +I+ +IG L Sbjct: 146 TAERRTVAVWLGEWLDIKEGDGTRASTLRAYRWLINMHIVPVIGRVQL------------ 193 Query: 92 RKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE 151 + LT + + + G SA +V + + + +A N K + Sbjct: 194 --DKLTPLDVRRLVASAKKSGLSAGSVRHVHSLIRNALAEAERLDLVARNVAKAVKAPPT 251 Query: 152 SRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 L EE RL++ R ++ + ++ + G+R GE+ L W D+DL T+ +R Sbjct: 252 PHREVRALRPEEARRLVEVLRGERLEAVFACGLMLGLRRGEILGLRWSDVDLDGATLHVR 311 Query: 212 RNLAKDRFT---VPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTE 268 + L + + VP ++R + + + LR + + D Sbjct: 312 QTLQRVDGSLMFVPAKTERSHRRLPIPPKLVTILRRHRATQTAERTGLGDA--------- 362 Query: 269 KQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTA 328 + VF + G ++ + +D ++AGL + + RH +A Sbjct: 363 WTETGLVFTSSI-------GTPLEPRNVNRRFDVLRRQAGLPWLRLHDLRHAFASMLFAE 415 Query: 329 GANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 G + +GH+ Q+ Y M E V L+ + Sbjct: 416 GVPARTVMELLGHSTIQLTMNTYTHVMPETQRDAVGRLDRIFN 458 >UniRef50_A4XMZ7 Phage integrase family protein n=3 Tax=Clostridia RepID=A4XMZ7_CALS8 Length = 327 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 78/351 (22%), Positives = 140/351 (39%), Gaps = 46/351 (13%) Query: 38 LTIKELAEKFL-ALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 + +K+ +L K+ + ++ Y ++I N ++ SI KL ++R E L Sbjct: 1 MLVKDWLNTWLWEYKKQTLRPSTFQDYESLINN--------HIVPSIGHYKLKDLRPEHL 52 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK-ESRTI 155 K + G S T+ + L++ + NG + N + + K +++ Sbjct: 53 QALYNSKH-----ESGLSLSTIKHIHVILHSALDQALKNGLVVRNVSEATTLPKAKTKKE 107 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 L+ EE R + A ++ K + +++ +GVR GEL AL W+ ++LK GT+ I+R+L Sbjct: 108 IRVLTLEEQKRFVAALEGERLKPAFLLALASGVRLGELLALKWDCVNLKEGTITIKRSLR 167 Query: 216 KDR-------------FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFR 262 + + F PKT AG R I + ++ L+ R Sbjct: 168 RIKTYDKSLPTKTMLAFQEPKTAAGI-RTIPVPPVILEELKEH----------------R 210 Query: 263 EYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYA 322 + EK K +++ G + +++ I++A L + RHTYA Sbjct: 211 KRQLEEKLKAGSLYEDNNLVFATELGTPIEPRNFLRVFYRIIEKANL-DINFHALRHTYA 269 Query: 323 CWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEF 373 L A +P + +GH D +Y M E A LN Sbjct: 270 TRLLEANEHPKVVQELLGHNDISTTLNIYSHVMPEIKKAAAMKLNNLFENI 320 >UniRef50_D2S5L4 Integrase family protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5L4_9ACTO Length = 404 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 73/348 (20%), Positives = 126/348 (36%), Gaps = 35/348 (10%) Query: 39 TIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTG 98 T+ ++L +K E T++ +YRA + E+ + +I + E+R E + Sbjct: 44 TVASFLARWLQVKAGEAKPTTVRSYRAHV--------ERVIVPAIGHVPIEELRAEHVEQ 95 Query: 99 YQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDP 158 + +N GR VTV L + +GV L N ++P R P Sbjct: 96 LLVDAAN------GRGPVTVRRIHATLRSALSYGVKTRRLPFNVASNVTPPNGIRPEVQP 149 Query: 159 LSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA--- 215 S E + + L+ V G+R GE L W D+DL N T IR+ + Sbjct: 150 WSAAELAAFLRHVETDRLGPLFEVIAACGLRRGEALGLRWSDLDLANRTARIRQTIVDVG 209 Query: 216 -KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTF 274 + +F+ PKT+ + + L + A+ AL L ++ + Sbjct: 210 GRLQFSTPKTR-SSEATVPLTERAVQALLQVRLGQDLDRQGWGGAY---------HAHDL 259 Query: 275 VFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAF 334 VF + G + + + A K AGLR + + RH A L AG A Sbjct: 260 VF-------ARENGAPLRPEYATRRFVALTKAAGLRWVRLHDLRHGAASLMLAAGVPMAI 312 Query: 335 IANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNEA 382 ++ + H+ + YG + + L + + Sbjct: 313 VSKVLRHSSIGITVDTYGHLSEDTVRTASDAMAAALEQACKSTAAAAG 360 >UniRef50_C1CZ59 Putative Tyrosine recombinase xerC-like protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1CZ59_DEIDV Length = 379 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 72/344 (20%), Positives = 135/344 (39%), Gaps = 36/344 (10%) Query: 34 ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVR 92 + + LT+ +++L K+ +V + +Y + +I +G+ L + + E+ Sbjct: 64 SSETLTLAAYLDRWLTHKQRDVKFNTHRSYEMTARVHIKPRLGKVQL-DKLTPLHIEELV 122 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 LL G+SA + L V + N + ++P K + Sbjct: 123 SALLA-------------EGQSAKVALGCVKLLRTALTQAVRWQLVGRNVAQSVTPPKHT 169 Query: 153 RTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 + +E R + R + L+ +++ TG+R GEL L WE I++ GT++++ Sbjct: 170 PKEMQVWTPDEASRFLAVAREHRLYALFYLALATGMRRGELLGLKWESINMLAGTLVVQH 229 Query: 213 NL----AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTE 268 NL + PKT+A + R I L ++ALR+ L + + + Sbjct: 230 NLIDRVSSVTLETPKTRA-SRRTIALSPDTVEALRAHRHSQWLEQCKAGE---------K 279 Query: 269 KQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTA 328 Q+ VF +V G ++ + +A + + + RHT A + A Sbjct: 280 WQEHGMVFPSDV-------GTLMFPANLMGAFRRLCAKARVPAIRLHDLRHTSASLLIRA 332 Query: 329 GANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 P +A+++GH D +VY E A L L E Sbjct: 333 NVPPKVVADRLGHTDPGFTLRVYAHVYEEQRRAAALPLGEMLRE 376 >UniRef50_B1RM53 Phage integrase n=4 Tax=Clostridium RepID=B1RM53_CLOPE Length = 400 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 65/335 (19%), Positives = 135/335 (40%), Gaps = 19/335 (5%) Query: 37 DLTIKELAEKFL-ALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 +T+ + +L + ++ +S Y + +N + +SSI K KL+++R Sbjct: 75 KITLSKWFYTWLFTYRIHDLKPSSFERYEGLYRNYIE-------SSSIGKIKLMDLRTHH 127 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE---S 152 + Y N +V++ +S T+ L + + GY+ N I+ K Sbjct: 128 IQAY----YNSLVSEERKSPSTIKTINKCLKSCLNQALKEGYITKNYCTLITLPKGSESP 183 Query: 153 RTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 + I + + EE + C N + L+ +++ TG+R GE+ AL W DI+ KN + I + Sbjct: 184 KEIINIFTLEEQQTFMKECMNNKNGMLYILALGTGLRLGEILALKWTDINFKNNYIDINK 243 Query: 213 NLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKC 272 + + K + NR +I+ S T+ + R+ ++ Sbjct: 244 AI----KSTYKIDSKGNREFQIIEQQPKTKNSIRTVPLNDNLIELLQQHRKKQMIDRDSN 299 Query: 273 TFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANP 332 ++ G++ ++R+ + + + L+ + + RHT+A G P Sbjct: 300 IEIYFDNNLVFSTPIGNYLNESNVRKTFKRILNKCNLKELRFHDLRHTFATRLFENGVPP 359 Query: 333 AFIANQMGHADAQMVFQVYGKWMSENNNAQVALLN 367 + +GH+D +Y M + + + LN Sbjct: 360 KTVQTILGHSDISTTLNIYTHVMKDTKDKAIDKLN 394 >UniRef50_Q31DR3 Tyrosine recombinase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31DR3_THICR Length = 433 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 97/380 (25%), Positives = 157/380 (41%), Gaps = 48/380 (12%) Query: 7 VCYAIKTGVFDYAKQFPSSRNLEKFGEARQDL--------TIKELAEKFLALKETEVAKT 58 + I G F+Y K FP+S L K +A L K+ E++ + E K Sbjct: 47 INAEITLGTFEYGKYFPNSSMLAKIEKATAKLVPGYTKTPLFKDFVEEWFSEMEPTWRKA 106 Query: 59 SLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVT 117 + + YR+ + K ++ GE + SSI K ++L+ R + + + T Sbjct: 107 TADGYRSYLDKRLIPHFGEMEV-SSITKAEILKYRAHVAKQ----------SAGKLKSKT 155 Query: 118 VNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAK 177 +N ++ LN V D Y P I PLKE + DP S EE +++ R+ + Sbjct: 156 INKFIKCLNMVMNEAADR-YDFTPPHLNIKPLKEEKVHIDPFSIEEVNQILAQVRSD-WR 213 Query: 178 NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKP 237 + V +TG+R GE+ L WE +D ++IR + R+ K G+ R I + Sbjct: 214 DYLLVRFFTGMRTGEIDGLKWEHVDFSRREILIRETYSAGRWEYTK-NDGSQREIEMSTL 272 Query: 238 AIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIR 297 + L + E VF A V T + +R Sbjct: 273 VYNTLSKRFKERDPKSE-------------------LVFCTGNGAPV------HTPNFLR 307 Query: 298 QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 ++W + L++RK YQ+RHT A L AG NP +IA QMGH+ M+F VY +++ Sbjct: 308 RVWRPLLSYLKLKYRKPYQTRHTAATIWLAAGENPNWIAKQMGHSTTSMLFTVYARYVPN 367 Query: 358 NNNAQVALLNTQLSEFAPTM 377 + + L+ Sbjct: 368 LTRKDGSAMERLLASNIDGF 387 >UniRef50_D2LSV7 Integrase family protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSV7_BACS4 Length = 391 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 75/378 (19%), Positives = 149/378 (39%), Gaps = 28/378 (7%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLNT 62 R ++ KT +F + ++ + + + K+ +++ + +L T Sbjct: 31 RKTITAKNKTEAKKRLAEFVTEIEAGEYIDPSK-MKFKDFVKEWETKYGMKHLGAKTLET 89 Query: 63 YRAVIKNIL-SIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 Y+++I N L G K L ++ L + + G S+ ++ + Sbjct: 90 YKSIINNYLIPTFGNKKL-DEFKPINIINY----LDCLGEDNARKDGKEGGLSSSSIKYH 144 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQ--QAKNL 179 L +F + + +NP + + P K ++ +++E I L++ +N+ K + Sbjct: 145 YRVLRNIFSRAKEWIIIKNNPVESVKPPKVTQEKTSVYTKDEVIELLELLKNEPIHQKLM 204 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA----KDRFTVPKTQAGTNRVIHLI 235 ++ G+R GE+ L W+DIDL GT+ I +L K P + R + + Sbjct: 205 VTAALMAGLRRGEILGLQWDDIDLDAGTISINHSLQYTKEKGYVLGPPKNNSSIRKVSIP 264 Query: 236 KPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDS 295 ++ + SKE I E G K +VF G F + Sbjct: 265 MYLVEEFKKYK--RTKSKERIQAAELWEGG-----KYFYVFSSW-------NGKPFYPTA 310 Query: 296 IRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 + W +KR G ++ + + RHT A + G + I+ ++GHAD + +YG ++ Sbjct: 311 VGTWWRRFLKRKGFKYIRFHDLRHTAATLLINEGEHAKTISARLGHADIKTTMNIYGHYL 370 Query: 356 SENNNAQVALLNTQLSEF 373 E + LN+ Sbjct: 371 READEKAANKLNSIFGNT 388 >UniRef50_C2RY84 Prophage LambdaBa04, site-specific recombinase, phage integrase n=4 Tax=Bacillus cereus group RepID=C2RY84_BACCE Length = 378 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 70/343 (20%), Positives = 131/343 (38%), Gaps = 39/343 (11%) Query: 36 QDLTIKELAEKFLA-LKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRK 93 ++LT+ E +++L + V T+ YR + I+ +IG L Sbjct: 61 KNLTLSEYLQEWLENTAKQRVRDTTFINYRRAVNSRIIPVIGSHKL-------------- 106 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 + L + + S + L + V L NPF+ + + + Sbjct: 107 KDLKPLHGQRFVKSLIDEELSPKYIEYIFIVLKGALEDAVKWELLYKNPFEHVEIPRPRK 166 Query: 154 TIPDPLSREEFIRLIDACR--NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 + + S EE + + N +L+ +++ TG+R GEL L W+++DL G + + Sbjct: 167 VVNNTWSIEETKTFLTYAKFDNPIYYHLFLLALNTGMRRGELLGLKWKNVDLVEGKVSVT 226 Query: 212 RNLAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRT 267 L D RFT PKT +G+ R+I + + L+S K I + Sbjct: 227 ETLIYDELGFRFTEPKT-SGSKRLISIDQSLCKELKSYKAKQNEFKLAIGKAY------- 278 Query: 268 EKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLT 327 + VF + G ++ +++ IK A + + + RHT+A L Sbjct: 279 --EDNDLVFS-------REDGRPIYPRTLTTVFERFIKTAQVPKIRFHDLRHTHATLLLK 329 Query: 328 AGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 G NP ++ ++GH + Y + + L+ L Sbjct: 330 LGINPKIVSERLGHNSIKTTLDTYSHVTLDMQESATIALSEAL 372 >UniRef50_D2S8K7 Integrase family protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S8K7_9ACTO Length = 377 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 70/339 (20%), Positives = 131/339 (38%), Gaps = 36/339 (10%) Query: 38 LTIKELAEKF--LALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 +T+ E + AL ++ + +++ Y + ++ +L + L +R Sbjct: 67 ITMAAWLEDWTTKALPASDRKQATIDLYATIARS--------HLVPKLGSLPLDRLRPSN 118 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 + + K + G SA +V L A V +G + NP + R Sbjct: 119 VEALVLAKR-----RAGLSASSVRTIYAVLRAALDVAVRDGLIQRNPAALVKRPAVERKD 173 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 LS ++ L++A R + + L+ V + TG+R GE AL W D+DL + +R L+ Sbjct: 174 AGYLSAQQAEALLEAVRGDRLEALYRVMLATGLRRGEALALHWRDVDLDAAVVRVRWTLS 233 Query: 216 KD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 + PKT+ + R + L PA++ LR+ + + Q Sbjct: 234 RTSAGLELGEPKTEK-SRRTVPLPVPAVETLRAHRKRQAAEQLAAGSL---------WQA 283 Query: 272 CTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGAN 331 VF E+ G ++ + ++A +RAGLR + RH+ A + L AG + Sbjct: 284 SGLVFTSEI-------GTPLEPRNVLRRFEALAERAGLRGVHLHTLRHSAASFLLAAGTH 336 Query: 332 PAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + +GH+ + +Y L + Sbjct: 337 TKVVQEHLGHSSYAITADIYSHVAPAQQREAADKLGQAI 375 >UniRef50_B1B8Q2 Phage integrase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B8Q2_CLOBO Length = 366 Score = 220 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 73/339 (21%), Positives = 136/339 (40%), Gaps = 38/339 (11%) Query: 37 DLTIKELAEKFLALK-ETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 +T+KE E +L + + ++ Y+ IK+I++ IG+ L S +N + + ++L Sbjct: 61 KMTVKEYIEYWLETYPKNNCSPSTYKRYKFFIKDIINYIGKHKL-SKLNPMIIQKFYEDL 119 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 L+ I S TV L+ + + +NP ++P K ++ Sbjct: 120 LSDRNI------------SNNTVIKTHRMLHLALKHAQQWQLINNNPCDLVTPPKATKQE 167 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 +E +D + + +++ TG R GELCA+ W D+DL + T+ I + L Sbjct: 168 MKYWQPDEINIYLDILKEEFLYPAIFLAIQTGCRVGELCAIKWSDVDLIDKTIRIDKTLQ 227 Query: 216 KDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 + PKTQ R I L++ AI L++ K +YG + Sbjct: 228 RIDCKLALKYPKTQNSI-RTITLLETAITFLKNLKKNRIEKK--------LKYGI----E 274 Query: 272 CTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGAN 331 +V E G I Q + + + L + + RH++A L AG N Sbjct: 275 LDYVLCWE-------DGRPIDPHYISQHFPKLLDKYNLPKIRFHDLRHSHATLLLKAGVN 327 Query: 332 PAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 I+ ++GH+ Y ++ +++ + L Sbjct: 328 AKIISKRLGHSTVAFTLDTYSHVSTKMQKEEMSKVENLL 366 >UniRef50_A3JCU8 Phage integrase n=2 Tax=Marinobacter sp. ELB17 RepID=A3JCU8_9ALTE Length = 408 Score = 220 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 88/397 (22%), Positives = 160/397 (40%), Gaps = 53/397 (13%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKF-----------------GEARQDLTIKELAE 45 L V I G F+YA+QFP SRNL K A Q + + A+ Sbjct: 43 LLQKVEAKILLGAFNYAEQFPDSRNLNKLKNDGSGAGINDEGADPEVNAAQTPYVADFAD 102 Query: 46 KFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSN 105 ++ + + + +++ + L + + I K +L R ++ K Sbjct: 103 QWFQESKIQWRSSHTRNVVSILDSSLKPAFKNTRMAEITKADILAARTKM------AKRR 156 Query: 106 YIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFI 165 + T+N+++T L + + DNP++ I PLK R +P S E Sbjct: 157 GRGASGLMAPKTINSHLTILRMIMTEA-SERFEFDNPYRNIKPLKLQRVHIEPFSLAEVE 215 Query: 166 RLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQ 225 R+ R +N + + YTG+R GE+ L W ++D + +++R L + KT Sbjct: 216 RICKYVRED-YRNYYQLRFYTGMRTGEIDGLKWANVDFEKQEILVRETLIHGKTEYTKTD 274 Query: 226 AGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVK 285 G+ R I + P +AL++Q + FVF Sbjct: 275 -GSQREIPMFGPVYEALKAQHAAIGKLSK-------------------FVFCNRE----- 309 Query: 286 NYGDHFTVDSI-RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADA 344 G +++ +++W ++ L R+ YQ+RHT A L +G NP ++A +GH+ Sbjct: 310 --GQPLDHNNVTKRVWYPLLEALKLTKRRPYQTRHTAATLLLASGENPEWVARVLGHSST 367 Query: 345 QMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNE 381 +M+F+VY +++ + L + +E Sbjct: 368 EMLFKVYSRFIPNLTRMDGSAFERLLGSRVDSRKESE 404 >UniRef50_C3L682 Prophage LambdaBa04, site-specific recombinase, phage integrase family n=10 Tax=Bacillus anthracis RepID=C3L682_BACAC Length = 374 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 68/343 (19%), Positives = 130/343 (37%), Gaps = 39/343 (11%) Query: 36 QDLTIKELAEKFLA-LKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRK 93 ++ T+ E +++L + V +T+ Y+ I I+ ++G L Sbjct: 61 KNFTLSEYLQEWLENTAKQRVRETTFTNYKRAINSRIIPVLGSHKL-------------- 106 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 + L + + G S + L + V L NPF+ + + + Sbjct: 107 KDLKPLHGQRFVKSLIDEGLSPAYIEYIFIVLKGSLEDAVRWELLFKNPFQHVEIPRPRK 166 Query: 154 TIPDPLSREEFIRLID--ACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 + S EE + ++ N +L+ +++ TG+R GE+ L W++ DL G + + Sbjct: 167 VVNSTWSIEETKKFLNRTKFENVIYYHLFLLALNTGMRRGEILGLKWKNFDLNEGKISVT 226 Query: 212 RNLAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRT 267 L D RFT PKT G+ R+I + + +S K + Sbjct: 227 ETLIYDENGFRFTEPKTH-GSKRLISIDQNLCKEFKSYKAKQNEFKLLFGQSY------- 278 Query: 268 EKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLT 327 + VF K G ++ ++ IK+A + + + RHT+A L Sbjct: 279 --EDNDLVF-------AKETGQPILPRTMTTTFNQFIKKADVPQIRFHDLRHTHATILLK 329 Query: 328 AGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 G NP ++ ++GH+ + Y + + V L+ L Sbjct: 330 LGINPKIVSERLGHSSIKTTLDTYSHVTIDMQESAVLKLSEAL 372 >UniRef50_B7IY65 DNA integration/recombination/invertion protein n=35 Tax=Bacillus RepID=B7IY65_BACC2 Length = 369 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 66/338 (19%), Positives = 120/338 (35%), Gaps = 32/338 (9%) Query: 35 RQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRK 93 +T+K+ +L +K + K++ YRA I +++ IG L Sbjct: 60 PSKVTLKDYLNHWLEIKSMSIQKSTFAGYRAFINQHVIPSIGMVALHK------------ 107 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 L I K G + ++ L + V ++ NP K+ + Sbjct: 108 --LNVMHIQKCYKTAINKGITNNSILLMHRILKSALNLAVKQNIISRNPADFAEIPKKEK 165 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 T + EE + + + + + +++ TG+R GE+ L W+DID + T+ I + Sbjct: 166 TSIQTWTEEEVKKFLAHSQESRYHIGYLLAITTGMRLGEVLGLRWQDIDFEKHTVTINQT 225 Query: 214 LAKD-RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKC 272 D + + R I + I AL+ L EK + Sbjct: 226 SGHDNKIKKTAKTNSSKRTIPVPNETIVALKKHKILI----------------NKEKLRF 269 Query: 273 TFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANP 332 + + +G R+ + A + G++ K + RHT+A L G NP Sbjct: 270 GSAYLDQDLINCNEFGRIIKRAHFRKSFIRATHKVGIKEIKFHDLRHTHATILLKQGVNP 329 Query: 333 AFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 I+ ++GH D M VY + V + Sbjct: 330 KIISERLGHTDISMTLSVYSHVLPNMQEEAVKNFGKSI 367 >UniRef50_A8MGP9 Integrase family protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGP9_ALKOO Length = 369 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 63/338 (18%), Positives = 132/338 (39%), Gaps = 32/338 (9%) Query: 37 DLTIKELAEKFLA-LKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 ++T+++ + +L + VA T+ + Y + I+G L I + ++ +L Sbjct: 60 NITLRDYMQLWLEDYAKPNVAPTTYDKYTYAANKVSEILGNMKL-QQIKPIHIQQLVNKL 118 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 + TV +Y LN V ++ NP ++P + ++ Sbjct: 119 -------------NNSDVTPSTVLSYYRVLNTAINQAVKWQFIQYNPCVAVTPPRNTKNK 165 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL- 214 L ++E L+D ++ + +++ G+R GE+ L WE+ID +G + + NL Sbjct: 166 MMILDQDEIQILLDKSKDHVLYPVIVLALLCGLRRGEILGLQWENIDFFSGVIHLENNLV 225 Query: 215 -AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCT 273 A + + +T+ T R I + + ++ ++S + + + Sbjct: 226 MANNESILKETKTSTGRRAVDISSNVVEVLKKVKKQKMSYKLLYGSSY--------HDSN 277 Query: 274 FVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPA 333 FV E G F D I + + + A L + + RHT+A L +G +P Sbjct: 278 FVCTWE-------DGRPFRPDYIPKAFAKILVSANLPKIRFHDLRHTHASILLKSGIHPK 330 Query: 334 FIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + ++GH+ + Y + + + T S Sbjct: 331 VVQERLGHSSISITLDTYSHLVPSLQKSAAEKMATMFS 368 >UniRef50_A5WDD8 Phage integrase family protein n=6 Tax=Proteobacteria RepID=A5WDD8_PSYWF Length = 401 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 96/372 (25%), Positives = 156/372 (41%), Gaps = 44/372 (11%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEARQD--------LTIKELAEKFLALKETEVAKTSL 60 I G F+YA+ FP S K + K+ AE + + KE E T Sbjct: 47 AEIVLGTFNYAQYFPKSDKASKMMALNDRKECINTSMPSFKQFAELWFSEKEIEWRDTYK 106 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 R +I L + +I K ++L R L K + SA +N+ Sbjct: 107 RKIREIIDMYLLPEFQGRPIDTIKKTEVLAFRSAL------AKVTRGKVKKPLSAARINS 160 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 M L + + Y +NP++ I LKE RT P + +E + I+ R +N + Sbjct: 161 IMVPLGMILKEASKR-YKFENPYEDIKSLKEPRTSIQPFTLDEVWKFINWVRED-YRNYY 218 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAID 240 V +TG+R E+ L WE+ID ++I + L K + PKTQ + R I + D Sbjct: 219 LVRFFTGMRTSEIDGLTWENIDFDRREIVINQALVKGKIVPPKTQE-SYRAIQMSPWVYD 277 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI-RQM 299 AL+ Q +T E +VF G+ +++ +++ Sbjct: 278 ALKEQHKVTYKRSE-------------------YVFCSHT-------GEPLDYNNVNKRV 311 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 W +K GL+ R +YQ+RHT A L AG +P +IA QMGH+ +M+F Y +++ Sbjct: 312 WHPTLKALGLKKRNAYQTRHTAATLWLAAGESPEWIAYQMGHSTTKMLFNTYSRYVPNMT 371 Query: 360 NAQVALLNTQLS 371 + ++ Sbjct: 372 RQDGSAFEALVN 383 >UniRef50_A7N7U1 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7N7U1_VIBHB Length = 341 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 95/342 (27%), Positives = 162/342 (47%), Gaps = 20/342 (5%) Query: 25 SRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSIN 84 ++ ++ + +T+ + +KFL ++ V ++ + + + G + ++ Sbjct: 8 AKAAKEIDMSNSQITVTQYIKKFLHSRKFAVKPSTFISEKCKANKLTRYFGSTPI-DAVR 66 Query: 85 KEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFK 144 ++E+ EL Y S ++N ++T L AVF +G + NP Sbjct: 67 HSDIIEMLDELHERY--------------SNKSINEFLTILRAVFLRAERDGVVDRNPMN 112 Query: 145 GISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLK 204 GI LK + IP+P +++E +L +Q KN + VYTG+R EL AL WEDID + Sbjct: 113 GIKNLKAIKPIPNPFTKKELSQLHQTLGCEQGKNAVELDVYTGLRISELLALSWEDIDWE 172 Query: 205 NGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY 264 N +++RR + KT+ T R + L + AI AL+ Q LT + I V + Sbjct: 173 NRVLLVRRAKVLQSYKTTKTKEST-RKVELNELAIQALKRQWALTGQLEAVKISVLQDDN 231 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACW 324 +++ VF + + + F + A +++AG+ HR Q RHT+A Sbjct: 232 KSYIEERVHIVFYNSQTNQPFLHAAQFN----NTFFRAFLEKAGVAHRGVGQLRHTFASQ 287 Query: 325 SLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALL 366 +LTAG +IA QMGHAD M+ YG+W+ ++ ALL Sbjct: 288 NLTAGIAKDWIAMQMGHADTSMIDDHYGQWIPADSPNYSALL 329 >UniRef50_C4TVA5 Bacteriophage integrase n=3 Tax=Enterobacteriaceae RepID=C4TVA5_YERKR Length = 396 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 93/383 (24%), Positives = 174/383 (45%), Gaps = 51/383 (13%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKE-TEVAKTSL 60 L + I+ G F+YA QFP S L FG + IK+ ++++++ E +++ ++ Sbjct: 54 RLLGEIHNRIERGTFNYADQFPRSVRLNVFGNNQSSKHIKKYLDEYISICESRKLSPATI 113 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 Y+ + + SS+++ + ++ ++ + + + T+ N Sbjct: 114 AGYKKCLSAL----------SSLHEVNVSDLTPAIVKNW--------IQGQKVALKTIRN 155 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLK--------ESRTIPDPLSREEFIRLIDACR 172 ++ L + V +G L NP +S + ES + DPLS +E ++ Sbjct: 156 RLSFLGSAIDEAVTDGLLPANPVSLVSASRYQGEDVRSESEYVVDPLSPDEAKAILSTAM 215 Query: 173 NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVI 232 N Q +NL+ +++TG+R ELCA+ W+D+DL T + + KT+AG R I Sbjct: 216 NAQWENLFRFALHTGMRSSELCAIRWQDLDLVGNTAHVITASVEGVIKGTKTKAG-RRKI 274 Query: 233 HLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFT 292 L A+ A+++Q T + + +VF + D Sbjct: 275 ELDSDALLAVKNQKPFTFMLNK-------------------YVFHDPKTNEAWTGADAIR 315 Query: 293 VDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYG 352 ++ W +KRAG+R+R YQ+RHT+A ++ GAN ++A QMGH +M+F+ YG Sbjct: 316 ----KKAWIPTLKRAGVRYRNPYQTRHTFATMHISQGANLFWLAGQMGHKGPEMLFRHYG 371 Query: 353 KWMSENNNAQVALLNTQLSEFAP 375 ++ E + + + +AP Sbjct: 372 SFLKEYSGMTEEVHQRSRTGYAP 394 >UniRef50_Q1QXU7 Phage integrase n=4 Tax=root RepID=Q1QXU7_CHRSD Length = 388 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 101/375 (26%), Positives = 171/375 (45%), Gaps = 33/375 (8%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLN 61 L + + Y I G FDYA+ FP SR L + T + +LA+K+ E+A +S Sbjct: 41 RLVTIINYEIDAGTFDYARHFPESRRL-------HESTFGFYLDLWLAIKKNELAYSSYR 93 Query: 62 TYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 + + ++ G + A I+ +L + ++ L + + T+ Sbjct: 94 GIASKAETHVRPRWGNEQ-ADDIDHIELQDWIQKDLATH-------------LANKTIKE 139 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC-RNQQAKNL 179 ++ + F+ A +P GI+ PDP + E ++++ + Q NL Sbjct: 140 VVSIMRQTFRLYATRNKKAFDPTLGINIRLPDDEDPDPFEKAEIRKILETPTKRVQELNL 199 Query: 180 WCVSVYTGVRPGELCALGWED-IDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPA 238 ++Y G R E AL WED +D++ G + RR + + RF V KT+ T RV HL+KPA Sbjct: 200 MKFAMYDGPRISEAQALAWEDVLDVEKGIIRYRRAVVRGRFKVTKTKRST-RVHHLLKPA 258 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIR- 297 +AL+ Q LT V R+ ++K VF +S G F ++IR Sbjct: 259 REALQEQFALTGNLPAQTYQVVDRDNRTVRQEKLRLVFLNSLS------GKPFYENAIRQ 312 Query: 298 QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG-ANPAFIANQMGHADAQMVFQVYGKWMS 356 + W +++AG+R+R Q RHT+ L+ G +IAN +GH+ M+ + YGKW+ Sbjct: 313 RFWKTHLEKAGVRYRGPNQCRHTFISQMLSLGVVPLHWIANHVGHSSITMIQRRYGKWIH 372 Query: 357 ENNNAQVALLNTQLS 371 + ++ L Sbjct: 373 ADGQDVPTMIEKLLD 387 >UniRef50_C0QHJ7 Phage integrase family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QHJ7_DESAH Length = 360 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 64/347 (18%), Positives = 120/347 (34%), Gaps = 45/347 (12%) Query: 29 EKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKL 88 + ++ T ++A+++L K+ + ++ Y KN + Sbjct: 50 GNYISPKKTPTFDQVAQEWLDHKKMNIRASTWAVYEGHTKNHFPEFKNLKI--------- 100 Query: 89 LEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISP 148 +T ++ K G + T+ + +L +F V GY NP Sbjct: 101 -----HQITIQRVEKFITDRQAAGMNLSTLRKILVSLRQIFNLAVKRGYCPRNPLDYADM 155 Query: 149 LKESRTIPD------PLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDID 202 K D L+ ++ ++ Q+ L+ +++++G R GEL L W DI Sbjct: 156 PKSQGEETDGADKIQILTHDQITAFLEVVTEQKYHVLFSLAIFSGARQGELLGLKWSDIL 215 Query: 203 LKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFR 262 + + I+R+ RF KT+ G+NR I + + L+ Sbjct: 216 WGDSQIHIQRSFNNQRFYDTKTK-GSNRKIDIGPVMLKKLKKWRLAC------------- 261 Query: 263 EYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYA 322 VF + + + + + +K A L + + RHTYA Sbjct: 262 -----PPGGLDLVFPTAKGNPMN------HNNMVNRYFLPGLKAAKLERIRFHDMRHTYA 310 Query: 323 CWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQ 369 + G N +I Q+GH++ + VY M N L Sbjct: 311 SLLIDQGENIKYIQAQLGHSNPTVTLNVYAHLMKGTNREAACRLEDA 357 >UniRef50_C6QSP6 Integrase family protein n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QSP6_9BACI Length = 399 Score = 217 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 70/354 (19%), Positives = 146/354 (41%), Gaps = 34/354 (9%) Query: 34 ARQDLTIKELAEKFL-ALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVR 92 A + + + + +++ E+++T+LN Y + IKN ++ ++ ++ +++ Sbjct: 69 APEKMKLADFIKEWETKYAVKELSETTLNNYLSHIKN--------HILPALGHMRIDQIK 120 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 + + + + T+ N + + Q V+ + NP + K Sbjct: 121 PVHIVNFLDQIKRADGKKKPLATRTIENAYLTIRNILQRAVEWQIIKSNPASAVKKPKSK 180 Query: 153 R---TIPDPLSREEFIRLIDACRNQ--QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGT 207 + +E L A +N+ + +++ G+R GEL AL W +IDL+ G Sbjct: 181 KEAVKEVQVYDEKEVEALFRAVQNEPFHWRIFTTLAIAAGLRRGELLALEWSNIDLEKGV 240 Query: 208 MMIRRNLAKDRF----TVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFRE 263 + I + + K R PKT+ +NR++ L K + L+ K + Sbjct: 241 IRINKAIVKGRKRSVEKSPKTKK-SNRLVSLPKSVVAELKLYRRHWLKQK--------LQ 291 Query: 264 YGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYAC 323 G K++ ++F G HF + W KRAG+R+ + + RHT A Sbjct: 292 AGDLWKEEKEYLFCNI-------DGRHFYPTTPTTWWRRFTKRAGIRYIRLHDLRHTSAT 344 Query: 324 WSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTM 377 + G + IA ++GH+D ++ +YG + + ++ L+ + + M Sbjct: 345 LLINQGVHAKIIAERLGHSDIRVTMDIYGHALQKADHEAANKLDHLFTNTSSQM 398 >UniRef50_B9KXE0 Transposase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KXE0_THERP Length = 316 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 74/327 (22%), Positives = 126/327 (38%), Gaps = 33/327 (10%) Query: 51 KETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQ 110 + T + + Y ++++ + ++ + L +V ++L + + Sbjct: 5 RRTSLRPRTWAGYESIVR--------VRIIPALGRLPLDKVEPQVLQAFASQ-----LLT 51 Query: 111 PGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDA 170 G S +V N L+ F V G L NP + + SR L+ E RL+ Sbjct: 52 QGLSVQSVQNTHPLLHRPFADAVKWGLLGRNPCDLVDLSRASRLQLRALTAPEVARLLAT 111 Query: 171 CRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQA 226 C + L V+V +G+R EL AL W DID + + R+L + R VP A Sbjct: 112 CADDPLGPLVTVAVLSGLRLRELLALQWGDIDWERSEPSVVRSLQRVRGQGLVVVPPKTA 171 Query: 227 GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKN 286 + R + L A++ALR Q V +R + +VF Sbjct: 172 ASRRRVPLSPLALEALRRQRRHQ---------VEWRLAAGPTWAEGDWVFTSV------- 215 Query: 287 YGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 G + + ++RAGL HR+ + RHT A L G +P +A+ +GH+ Q+ Sbjct: 216 RGVPLDPAETTRRFHRLLERAGLPHRRFHDLRHTTASLLLADGVHPKVVASILGHSTVQV 275 Query: 347 VFQVYGKWMSENNNAQVALLNTQLSEF 373 VY + L ++ Sbjct: 276 TLDVYSRVTPGLARQAAERLQQLVANS 302 >UniRef50_C1SH59 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SH59_9BACT Length = 390 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 74/361 (20%), Positives = 144/361 (39%), Gaps = 46/361 (12%) Query: 10 AIKTGVFDYAKQFPSSRNLEK--FGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVI 67 I F YA+ FP SR + ++ ++ A +L ++T + + TY + I Sbjct: 57 KIDDKTFKYAEYFPESRVAKALPMADSSPQISFGTYAILWLDSQKTVFSHATFITYTSSI 116 Query: 68 KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNA 127 N+L+ ++ +++ + Y + S T+ N++ L++ Sbjct: 117 NNLLATFENMSIC---------DIKPAHIRTY--------IKNSEVSPKTLKNHVGVLSS 159 Query: 128 VFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQ--AKNLWCVSVY 185 + V++ + NP + S DPLS EE +++ ++ + V+ + Sbjct: 160 ILSAAVEDDLIPKNPCTSVKLPHISSVEVDPLSLEEITMILNWMKSHHPNMLAFFAVAFF 219 Query: 186 TGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQ 245 TG+R GE+ L W DID + T+ I R + + +T+ +R + ++ + L Sbjct: 220 TGMRTGEIMGLQWGDIDFNSHTITISRTITAGKLK-HRTKTADSRTVDILTELDEYLSYH 278 Query: 246 MTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIK 305 T + E + F Y K + I+ W +K Sbjct: 279 KQFTYMKSEWL----FLTYENKPFNKTDNI--------------------IKTYWKPCLK 314 Query: 306 RAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVAL 365 G+++R YQ+RHT+AC L G N ++ +GH M+ + YG + + + Sbjct: 315 ALGIKYRTLYQTRHTFACLMLDVGENINWLKKMLGHKTLDMILRRYGNRIDKTVGRKGGK 374 Query: 366 L 366 L Sbjct: 375 L 375 >UniRef50_B4BIA4 Integrase family protein n=2 Tax=Geobacillus RepID=B4BIA4_9BACI Length = 384 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 62/348 (17%), Positives = 127/348 (36%), Gaps = 38/348 (10%) Query: 29 EKFGEARQDLTIKELAEKFLAL-KETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEK 87 F E+ +D E++ + V T+ + VI+N ++ +K Sbjct: 59 SYFKESTED--FSMFMERWFNTSYKRTVEITTAKSREYVIRN--------HIMKYFQHKK 108 Query: 88 LLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS 147 + E+ + + + K G S + LN F V + NP K Sbjct: 109 INEITTFDIDSFYVDK-----LDTGYSGAYIRQMHNLLNQAFDQAVKWSLVKVNPVKNAK 163 Query: 148 PLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGT 207 P K + +E R ++ ++ + + ++++TG+R GE+ L W+D+D +N Sbjct: 164 PPKVKSEEKITWTVDEVNRFLNLIKDSSMEIPYLLAIFTGMRRGEVLGLKWDDVDFENKK 223 Query: 208 MMIRRNLAKDR-----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFR 262 + I+R+L F PKT+ + R I + + ++ L+ KE + Sbjct: 224 IRIKRSLCFVSGKGLIFKEPKTKK-SKRQISISQHVVNVLKKHKQKQEFQKEKLGVQ--- 279 Query: 263 EYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYA 322 +Q + G ++ + + I+ A + + RHT+A Sbjct: 280 -------------YQDNNLIVCTDDGKPLDPRNLLRQFYRLIEEANVPRISFHDLRHTHA 326 Query: 323 CWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + G NP ++ ++GH+ + +Y + L Sbjct: 327 TILMQQGENPKVVSERLGHSRVGITLDLYSHVSDDLQEQAAEKFENAL 374 >UniRef50_Q2T7M7 Bbp50 n=13 Tax=root RepID=Q2T7M7_BURTA Length = 356 Score = 214 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 86/384 (22%), Positives = 153/384 (39%), Gaps = 45/384 (11%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLN 61 L + I+ G F + FP L + + +++LA + E K++ + Sbjct: 12 RLAIEIRSRIRHGTFSMVEYFPE-------DGTTTSLLLGDWLDRWLAAQRIE--KSTKD 62 Query: 62 TYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 Y IK + + + ++ + + +P + T+NNY Sbjct: 63 GYTTAIKFWKETPRDLGQTRPLGGVSIKSLKTIDIQ-------TAVANRPDLTGKTINNY 115 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQ---QAKN 178 ++ L + V + + ++P + P K + PDP S EE +I Q N Sbjct: 116 LSVLRSALSLAVKDKLIVESPADAVPPAKHQKQPPDPFSAEESNSIIACAERSYPGQVHN 175 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPA 238 + +TG+R E+ L W +D +GT++I + + + +T+ R++ L A Sbjct: 176 VTEFWFWTGLRTSEIYGLEWPHVDFASGTLLIAKAFVRGE-QMDRTKTKVARLVILNSRA 234 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 + AL+ Q T+++ VF D F R Sbjct: 235 LAALQRQRAFTQMANGR-------------------VFHDPRYNEGWADEDAFR----RT 271 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 W+ +KR G+R+R+ Y RH+YA L AG PAF A Q+GH+ +M Y KW+ + Sbjct: 272 YWEPMLKRLGIRYRRPYNMRHSYATAMLMAGMTPAFCAKQLGHS-VEMFLTTYSKWIDGD 330 Query: 359 NNA-QVALLNTQLSEFAPTMPHNE 381 N ++A L +S P + Sbjct: 331 QNDLEMARLERAISSPEPPQAKEK 354 >UniRef50_C8VWK7 Integrase family protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWK7_DESAS Length = 389 Score = 213 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 69/345 (20%), Positives = 126/345 (36%), Gaps = 29/345 (8%) Query: 34 ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVR 92 A LT KE ++K+L K+ ++A +L Y+ ++ IL +G + I +++ Sbjct: 60 APSKLTFKEFSQKWLESKK-DLAPKTLYRYKEILNSRILPAMGHLKIED-IKPFHIMQFY 117 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 L Q P + S TV + L +F V + NP + K Sbjct: 118 GNL----QEPGIREDGKEGTLSPATVLYHHRLLTNIFNAAVKWQIILTNPALRVEAPKAK 173 Query: 153 RTIPDPLSREEFIRLIDACRNQQAK--NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 + E+ L+ A Q K + +++ G+R GE+ L W+DIDL GT+ + Sbjct: 174 KHKATSYEEEDTAALLSALEEQPLKFQAIVYIALGCGLRRGEIMGLEWKDIDLTKGTLEV 233 Query: 211 RRNLAK----DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 R++ F + R+I + + L+ + + + Sbjct: 234 RQSSQYLPGHGTFAKSPKNESSERIIAVPTETMSLLKQHRVQQNEQRLQVGGL------- 286 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL 326 +Q G DSI + + +K L + RHT A + + Sbjct: 287 ---------WQASDRLFTTWDGKPMHPDSITKWFSGFLKNNNLSPLPFHGLRHTAASYMI 337 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 AG IA+++GH+ +Y + +N L+ Sbjct: 338 KAGIPLKNIASRLGHSSPNTTLNIYAHSFKSVDAEAANKMNDILT 382 >UniRef50_A4G7G1 Putative integrase n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G7G1_HERAR Length = 387 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 91/381 (23%), Positives = 171/381 (44%), Gaps = 50/381 (13%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLN 61 + + V ++TG+F YA FP SR+ + T+ E +K+ A + E+ ++L+ Sbjct: 49 RIAAEVRDKVRTGLFAYADYFPQSRHAK----PDHVGTVGEFMDKWYA--QLELKPSTLS 102 Query: 62 TYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 Y+ + +N ++ ++++ ++ +T + + S T NN Sbjct: 103 EYKRMKENFWK--------PALGRKRVDKITHSDIT-------TALKSGTWSSNRTRNNM 147 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAK---N 178 + L AVF V +G + NP I + R PDP S E R+I + +Q + N Sbjct: 148 LYMLRAVFNLAVADGVIHKNPCATIENAQWQRKKPDPFSIVEANRIIASLHEKQHQQVAN 207 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPA 238 + ++G+R GE L W ++DL ++IR++ + KT + R + L A Sbjct: 208 FYEFMFFSGLRTGEGLGLDWANVDLHKRIVVIRQSFVRGEMQETKT--SSERTVKLTNRA 265 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 +DAL+ Q T L K VF + R + + Sbjct: 266 LDALKRQKAWTLL------------------DKSGRVFHNPSTNRPWAKEQNISEP---- 303 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE- 357 W A+K G+R+R+ Y +R TYA L +GA PA++A Q+GH+ ++ ++ Y W+++ Sbjct: 304 YWKPALKLLGIRYRRPYNTRATYATIGLMSGARPAYMAAQLGHS-LEVFYRDYADWIADQ 362 Query: 358 NNNAQVALLNTQLSEFAPTMP 378 +++ ++ + Q+ P + Sbjct: 363 DDDREMGKIEAQIGASIPVLS 383 >UniRef50_C1IAU4 Phage integrase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IAU4_9CLOT Length = 390 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 54/339 (15%), Positives = 133/339 (39%), Gaps = 21/339 (6%) Query: 36 QDLTIKELAEKFL-ALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKE 94 + +T++E +L K E+ +++ Y +N + +I + KL ++ Sbjct: 69 EKITLEEWYNIWLFQFKANELKASTIERYNVFYRNYIK-------GCNIGQVKLKDLTAP 121 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRT 154 ++ Y + + G++ TV L + + Y+ N + P K Sbjct: 122 IIQNYY-----NSLIKNGKTPYTVKMLHKALKSSLSYAKRINYIGINCCDNVIPPKVINK 176 Query: 155 IPD---PLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 D + EE + ++ ++ + + ++ +++ TG+R GEL AL W+DI+ T+ + Sbjct: 177 DDDKFKVFTLEEQKKFMNVIKDHKYRLMFILALGTGIRIGELVALKWDDINFDECTLKVN 236 Query: 212 RNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 +++++ + + ++ P + ++ + + +I + R+ K Sbjct: 237 KSISRSYIEI---EGKRKFLLEETTPKTRSSIREVGIPSNILKELI--NHRKEQDEYKDN 291 Query: 272 CTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGAN 331 ++ G + D++ + + +K + H + + RHTYA G Sbjct: 292 YKEIYTDNNYVFTDALGRYILPDTLSKAYLKVLKDNNIPHTRFHSLRHTYATRLFEKGVP 351 Query: 332 PAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + +GH+ ++ +Y + + V LN Sbjct: 352 LKTVQKLLGHSSIKITADIYTHVIGNEKISAVEKLNDLF 390 >UniRef50_C5T6H4 Integrase family protein n=2 Tax=Burkholderiales RepID=C5T6H4_ACIDE Length = 501 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 82/401 (20%), Positives = 150/401 (37%), Gaps = 66/401 (16%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEAR-------------------------- 35 ++ + + I G F YA FP+S+ L + +A Sbjct: 42 KVLAKIEAEIAAGTFVYANYFPNSKALARLEKAAGQAVQIAVAPVGVEAQHTAGPLKVEA 101 Query: 36 ----QDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLE 90 A +++ + E ++ L + + + ++ EK + S I K +L Sbjct: 102 EPASPTPPFSTFALQWVEEHKIEWRRSHLRSLMSTLNGRLIPHFKEKAV-SQITKSDILT 160 Query: 91 VRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK 150 R L K + G S +N + L + D + +P G+ L+ Sbjct: 161 FRATL------AKVKGRGDKEGLSPKRINEIIGTLGQIMDEAADR-FEFTSPMTGVKRLR 213 Query: 151 ESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 +T DP S + ++ R ++ + +TG+R GE+ L W +D + +++ Sbjct: 214 VRKTDVDPFSLADVQSILTTVRAD-YRDYFTTRFFTGMRTGEVHGLKWRYVDFERRLILV 272 Query: 211 RRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQ 270 R KT G+ R I + +P DAL Q T Sbjct: 273 RETFVLGEDEYTKTD-GSQRDIQMSQPVFDALLRQREATGKL------------------ 313 Query: 271 KCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGA 330 +VF + N +F+ ++W ++ GL R+ YQ RHT A L +G Sbjct: 314 -SDYVFCNMAGQPLDN--KNFSD----RVWYPLLRHLGLTERRPYQMRHTAATLWLASGE 366 Query: 331 NPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 P +IA Q+GH +M+F+VY +++ + + L+ Sbjct: 367 APEWIARQLGHTSTEMLFRVYSRYVPNLTRQDGSAMERLLA 407 >UniRef50_B9MP49 Integrase family protein n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MP49_ANATD Length = 373 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 63/341 (18%), Positives = 132/341 (38%), Gaps = 35/341 (10%) Query: 36 QDLTIKELAEKFLA-LKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRK 93 + T EL + +L + + V+ ++ +Y + I +I +G+ L + + L + + Sbjct: 59 EQKTFGELLDLWLNTVAKNRVSLSTFQSYSSSIALHIKPFLGDVEL-NKLTAMDLQKYYQ 117 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 +I + G S+ + ++ + V + NP + P ++ Sbjct: 118 ------------HITGEKGLSSTLALYHHRIIHQALDYAVRMNMIEKNPADYVDPPRKRS 165 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 P + R +D RN +++YTG+R GE+ AL W+DI+L+ G +++ + Sbjct: 166 YQPSIWDEDTIKRALDIFRNTNIWVPVLLAIYTGMRIGEITALKWDDINLEQGYIVVSKT 225 Query: 214 LAKDRFTVPKTQAG----TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 L K + + G + R++ + I+ L+ KE + ++ Sbjct: 226 LMKINRQLYIKEKGENKSSYRIVAISSNVIEELKQWRRKQEQYKEKLKEL---------- 275 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG 329 + E G I +++ I++ GL + + RHT+A L G Sbjct: 276 ------YHNEGFVCTFEDGRVQDPKYITKVFQKTIEKHGLPKIRFHDLRHTHASLLLKHG 329 Query: 330 ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 +P I++++GH+ +Y E L Sbjct: 330 VDPKHISDRLGHSTITTTLNIYSHVFDEKRRKVAETFEDIL 370 >UniRef50_A8UWI5 Phage integrase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWI5_9AQUI Length = 369 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 79/371 (21%), Positives = 143/371 (38%), Gaps = 60/371 (16%) Query: 19 AKQFP---SSRNLEKFGEAR------------QDLTIKELAEKFL-ALKETEVAKTSLNT 62 K FP + R EK + ++ E++L + V ++ Sbjct: 23 RKWFPAGTTKREAEKVLAEKLAELNAGSSVLPPEVRFSFFCEEWLSKYAKGSVKPSTFRR 82 Query: 63 YRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 Y +I+ + + G+K L+ + +L GY + + + S TV Sbjct: 83 YEGIIRNHFMPRFGDKKLSR---------ITTGMLQGYVAERLSQV------SPTTVLQE 127 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWC 181 + L +F+ GY+ NP + + + + D L+ EE L++ ++ + + Sbjct: 128 VVLLKEMFKHAQSWGYIKHNPAQNLQRPRREKKEIDILTPEEVEFLLENT-HEHYRVAFL 186 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDA 241 +V TG+R GEL L W+DID + + +RR L F PK++ + + + ++ Sbjct: 187 TAVMTGLRAGELWGLKWDDIDWHSKQIYVRRTLWNGEFHTPKSRHSIGK-VDMPDVLVEE 245 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWD 301 L+ R K VF + + + + + Sbjct: 246 LKLWEI------------------RCPPNKYNLVFPSPKGEPSE------HQNVVNRYFK 281 Query: 302 AAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN--N 359 A++RAGLR + RHT A + AG N +I Q+GHA +YG + N Sbjct: 282 PALRRAGLRVVSFHSLRHTNASIRIRAGQNIKYIQRQLGHASINTTLDIYGHLFEDMDFN 341 Query: 360 NAQVALLNTQL 370 +Q LL+ L Sbjct: 342 RSQAQLLDGVL 352 >UniRef50_Q12GK7 Phage integrase n=11 Tax=Proteobacteria RepID=Q12GK7_POLSJ Length = 471 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 90/384 (23%), Positives = 158/384 (41%), Gaps = 54/384 (14%) Query: 7 VCYAIKTGVFDYAKQF--------PSSRNLEKFGEARQD----------LTIKELAEKFL 48 + I G FDY K F P +++ AR D E A+++ Sbjct: 47 IETDIALGTFDYEKTFGKPLPQPEPKTKDGSVDRTARSDGLPVLSRNGTPLFGEFAQQWF 106 Query: 49 ALKETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYI 107 E ++ T + + K +L G+K + I K +L R L K Sbjct: 107 TEVEVSWRRSYRITQKGALDKYLLPFFGDKEVG-HITKADVLAFRASL------AKVTTR 159 Query: 108 VTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRL 167 +Q S VN M L + D + ++ F+ I PLK R+ P + +E + Sbjct: 160 KSQGTLSNRRVNAVMKPLRQILNEAADR-FEFNSAFRNIKPLKMKRSDVQPFTLDEVELI 218 Query: 168 IDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAG 227 ++ R +N + V +TG+R GE L W+ +D + +++R ++ + KT G Sbjct: 219 LNTVRVD-YRNYFNVRFFTGMRTGEAHGLKWKYVDFERRLILVRESIVLNEEDELKTD-G 276 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 + R IH+ + DAL++Q E +VF + N Sbjct: 277 SVRDIHMSQVVYDALKAQYQAAGEFSE-------------------YVFCSRSGQPINN- 316 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 + + ++W+ ++ GL HR++YQ RHT A L +G P +IA Q+GH +M+ Sbjct: 317 -----QNFLNRVWNPLLRHLGLEHRRAYQMRHTAATLWLASGEAPEWIARQLGHTSTEML 371 Query: 348 FQVYGKWMSENNNAQVALLNTQLS 371 F+VY +++ + + L+ Sbjct: 372 FRVYSRYVPNLTRQDGSAMERLLA 395 >UniRef50_D0J3Y8 Phage integrase n=5 Tax=Burkholderiales RepID=D0J3Y8_COMTE Length = 394 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 105/373 (28%), Positives = 165/373 (44%), Gaps = 59/373 (15%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVA-----K 57 LR + I G F YA FP S ++ + ++ L +K L +V Sbjct: 56 LRDEIRRKIAEGGFSYADYFPDSPRAA--APSKSNPLMETLLQKQLDTYARQVKNGQMSP 113 Query: 58 TSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVT 117 ++ N Y I GE+ + K+ EV LL + V++ ++ Sbjct: 114 STYNGYAKAIT------GER--MRRWHGLKVGEVLPSLLRDW--------VSEMDCTSKA 157 Query: 118 VNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRT-------IPDPLSREEFIRLIDA 170 + N +T L ++F+ +++ + NPF+ I+ K R + P S E ++ A Sbjct: 158 IRNMLTPLRSLFEDALNDELIDFNPFERIALSKLIRQTAKASDYVVTPFSAAEREAILKA 217 Query: 171 CRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNR 230 CR + + + TG+RPGEL AL W IDL+ I N PKT AG R Sbjct: 218 CRPDE-RPMLQFWFETGLRPGELQALQWSHIDLERAIARIELNQVAGVIKGPKTAAGI-R 275 Query: 231 VIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDH 290 + L A+ ALR+Q ++ L E I G+ Sbjct: 276 DVELSAEALAALRAQRPISELKGERIW-------------------------LNPRTGEP 310 Query: 291 FTVDS-IRQ-MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVF 348 ++ D+ IR+ +W KRA + +R YQ RHTYA LTAGANP ++A+Q+GH D +MVF Sbjct: 311 WSTDAQIRKTLWQPVCKRAEVEYRNPYQVRHTYASALLTAGANPWYVASQLGHEDVEMVF 370 Query: 349 QVYGKWMSENNNA 361 + YGK++ ++ Sbjct: 371 RTYGKFIRDDYQK 383 >UniRef50_UPI0001694281 DNA integration/recombination/invertion protein n=8 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694281 Length = 413 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 68/362 (18%), Positives = 135/362 (37%), Gaps = 34/362 (9%) Query: 34 ARQDLTIKELAE-KFLALKETE---VAKTSLNTYRAVIKN-ILSIIGEKNLASSINKEKL 88 A Q +T+++ E ++ + ++ + TY I+N I+ + G KNL + Sbjct: 71 APQKMTLRQFIENEWEPKYASNTENLSPLTYQTYMHFIENRIMPVFGHKNLEDIRTLHIV 130 Query: 89 LEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISP 148 + P++ S T+ L +F + + NP G+ Sbjct: 131 T-----FINDLSKPEARKDGKSGKLSPGTIQYIHRVLKNIFNRATEWQLIKTNPIVGVKK 185 Query: 149 LKESRTIPDPLSREEFIRLIDAC--RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNG 206 K +T D +E I A ++ + L S+ G R GEL AL W ++D N Sbjct: 186 PKVEQTEFDFYDEDEAREAIAALSKEPRRWRLLILGSMVGGFRRGELLALEWSNVDFDNM 245 Query: 207 TMMIRRNLA-----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHF 261 T+ I ++++ + PK++ + R++ + +D L+ + K + D Sbjct: 246 TLSINKSISLTKDGRAVEKAPKSK-SSKRIVDMPDWYMDELKVHEYEWKKEKLSVGD--- 301 Query: 262 REYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTY 321 + +VF +G F + W+ KR L+ + + RH+ Sbjct: 302 ----KWRGGDRQYVFH-------AGFGKPFHHTYPTEWWNGFTKRHNLKRVRFHDLRHSS 350 Query: 322 ACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEF--APTMPH 379 A + AGA+ + ++GH+ Q +Y + + N ++P Sbjct: 351 ATLLIEAGASMKAVQQRLGHSKHQTTADIYAHVTKKVSRDTAEKFNKFAPNNIRPQSVPK 410 Query: 380 NE 381 + Sbjct: 411 TQ 412 >UniRef50_B8D1P6 Phage integrase family protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1P6_HALOH Length = 391 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 134/343 (39%), Gaps = 31/343 (9%) Query: 35 RQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKE 94 ++ + + +++ +++ +A ++ Y+ +I N +LA I + KL +++ Sbjct: 65 PSEMKLIDWLHRWIEGRKSTLAYSTYRNYKVMINN--------HLADDIGETKLKDLKAR 116 Query: 95 LLTGYQIPK--SNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS-PLKE 151 + K + + G S TV + L+ + V + N K + P K+ Sbjct: 117 QVQELLNDKLEKGKVYGEGGLSPRTVKYIYSTLHTALEQAVKENMIPRNICKAVEVPKKQ 176 Query: 152 SRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 ++++ + A R+ + L +++ TG+R GEL L W+DID++ + ++ Sbjct: 177 EEKKLHTWNKKQVNIFLKAARDYKYFILHYLALNTGMRRGELLGLQWKDIDMEKKRIEVK 236 Query: 212 RNLAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRT 267 R LA+ F KT++G NR I + + L+ + + + + Sbjct: 237 RQLARTDEGLIFKKVKTKSG-NRTIPITDNVVRELKRHQIKQGEKRLALGEAY------- 288 Query: 268 EKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLT 327 +K V + G+ ++ + + I+ GL + + RHT+A L Sbjct: 289 -NKKADLVASNGI-------GNPIDPRNLVRDFKDIIEETGLPEIRYHDLRHTFATLFLE 340 Query: 328 AGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 A + +GH+ + Y E + T Sbjct: 341 AKGPIKTLQQILGHSSITVTIDTYSHVTEEMLIEAERKMETMF 383 >UniRef50_A0KWT4 Phage integrase family protein n=5 Tax=Gammaproteobacteria RepID=A0KWT4_SHESA Length = 407 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 86/391 (21%), Positives = 160/391 (40%), Gaps = 59/391 (15%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDL--------------------TIK 41 + +++ I+ F + FPSS +F E + T + Sbjct: 40 NILNTIEAEIRLNRFVFKSYFPSSSRCSQFSEYDIRVQQHLAENVEPLTVNIMSNIPTFE 99 Query: 42 ELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQ 100 E +++ + + K+ + +I+ +L G L + I + L++ R + Sbjct: 100 EFVGEWVVENKIQWKKSHCKNIQMIIECYLLPAFGHIRL-NEITRPSLIKFRASIAD--- 155 Query: 101 IPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLS 160 S T S +N+ MT L + + PF I PL+ +T+ +P S Sbjct: 156 ---SRRTGTTEKLSNDWINHVMTPLRGILNEAA-LRFDFPTPFVNIKPLRIDKTVIEPFS 211 Query: 161 REEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFT 220 E ++ R+ +N + V +T +R E+ L W+ ++L ++I+ L Sbjct: 212 LAEVQYFLEHIRDD-FRNYYTVRFFTAMRTAEIDGLKWQFVNLDRYEILIQETLVDGYVE 270 Query: 221 VPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEV 280 PKT + + R I L +P +DAL+ Q +T T+VF Sbjct: 271 TPKT-SASYRSIQLSQPVVDALKRQRKVTGNK--------------------TYVFCNAS 309 Query: 281 SARVKNYGDHFTVDSI-RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQM 339 G+ ++ +++W A+ L+ R+ YQ+RHT A L AG NP +IA QM Sbjct: 310 -------GNPLEHRNVTKRIWYPALDEMCLKRRRPYQTRHTCATLWLAAGENPEWIAKQM 362 Query: 340 GHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 GH+ +M+F+VY +++ + + + Sbjct: 363 GHSTTKMLFEVYSRYVPNATRQDGSAFDRLI 393 >UniRef50_Q7N1I7 Similar to bacteriophage integrase n=8 Tax=Enterobacteriaceae RepID=Q7N1I7_PHOLL Length = 352 Score = 211 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 92/368 (25%), Positives = 171/368 (46%), Gaps = 53/368 (14%) Query: 6 SVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKET-EVAKTSLNTYR 64 + I+ +F YA+ FP+S L+ FG + TIK+ +++L + ET ++ +++N Y+ Sbjct: 17 EIYNKIERDIFIYAEFFPNSSRLKIFGNVNKGRTIKDYLDEYLKICETRNLSPSTINGYK 76 Query: 65 AVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTN 124 K S ++K ++E+ +L + +S + T+ N ++ Sbjct: 77 KC----------KTALSELHKIPVVELTPAILKTWIQKRSTAL--------KTIRNNLSF 118 Query: 125 LNAVFQFGVDNGYLADNPFKGISPLK--------ESRTIPDPLSREEFIRLIDAC--RNQ 174 L + V + ++ NP ++ + +S I DPLS E L+ A + + Sbjct: 119 LRSAIDEAVTDCLISMNPVNLVTASRYQTERIENDSEYIVDPLSPNEVTALLSAAGNKQK 178 Query: 175 QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHL 234 Q +NL+ +++TG+R ELCAL W+DID T ++ KT+AGT R + L Sbjct: 179 QWENLFLFAIHTGLRSSELCALRWQDIDFIGKTAHVQSAKVVGIIKGTKTKAGT-RKVEL 237 Query: 235 IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVD 294 A+ AL +Q T + K +F+ + D Sbjct: 238 NTDAMSALLNQKAFTFM-------------------KGNVIFEDPKTGEAWAGADAIR-- 276 Query: 295 SIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKW 354 ++ W +++AG+R+R YQ+RHT+A ++ G N ++A QMGH +M+F+ YG + Sbjct: 277 --KKAWVPTLRKAGIRYRNPYQTRHTFATKHISQGVNLFWLAAQMGHKGPEMLFRHYGSY 334 Query: 355 MSENNNAQ 362 + + + + Sbjct: 335 LKDYDGST 342 >UniRef50_D2BJR0 Site-specific recombinase, phage integrase family n=2 Tax=Dehalococcoides RepID=D2BJR0_DEHSV Length = 385 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 68/345 (19%), Positives = 133/345 (38%), Gaps = 39/345 (11%) Query: 39 TIKELAEKFLALKET-EVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLT 97 T+ E +L + A + Y +++ +L ++ + +L ++R E + Sbjct: 65 TVGTFLESWLETYASCNTAPRTFERYSQIVR--------LHLTPNLGRIELTQLRPEHIQ 116 Query: 98 GYQIP-KSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP 156 Y S V+ G SA TV ++ L+ V G LA N + P + + Sbjct: 117 AYYSKALSGGRVSGGGLSAQTVKHHHRVLSEALNHAVKWGLLARNVAMAVDPPRPEKREM 176 Query: 157 DPLSREEFIRLIDACRNQQ------AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 ++ E+ L + + + ++ +++TG+R GE+ AL W DIDL + + Sbjct: 177 HTIAPEDMSVLFEEAAKMEKNSGLPYELIFMTALHTGMRRGEILALRWSDIDLAKSKIYV 236 Query: 211 RRNLA-----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 R +L + PKT G+ R++ + ++ L + + Sbjct: 237 RCSLQCLKNGEIIIREPKT-PGSRRLVSMTPSLLEKLIIHKESSSAN---------MILQ 286 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWS 325 Q + VF G +++ + KRAGL + + + RH++A Sbjct: 287 GKTLQGDSLVF-------AHFDGTPINPNTVSPAFAKIAKRAGL-NLRLHDLRHSHATLM 338 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 LTAG +P ++ ++GH+ Y + +A L Sbjct: 339 LTAGVHPKIVSERLGHSTVAFTLDTYSHVIPGLQDAAAKTFEKSL 383 >UniRef50_B4V6V4 Phage integrase n=6 Tax=Streptomyces RepID=B4V6V4_9ACTO Length = 426 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 79/368 (21%), Positives = 134/368 (36%), Gaps = 35/368 (9%) Query: 34 ARQDLTIKELAEKFLA-LKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEV 91 A D T+ +L + + + + Y A I+ ++ +G K LA + + Sbjct: 74 AAADSTVSAYLAYWLDGVAVHHLRENTHTRYAASIRLHLNPGLGVKKLAR-LTTRDVRTF 132 Query: 92 RKELLTGYQIPKSNYIVTQPG-----------RSAVTVNNYMTNLNAVFQFGVDNGYLAD 140 L T Q N + S +TV L + + V L Sbjct: 133 LDGLRTTCQCCAQNRDSVRRSCCAIGQCCGKRLSPLTVTYVHAVLKSALEHAVREDELPR 192 Query: 141 NPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWED 200 N + + PL+ E +L+ A + L+ +++ TG+R GEL L WED Sbjct: 193 NVARNVKTTTPRPRRFQPLTAAEARQLLHAANGDRLNALYELALRTGLRKGELLGLHWED 252 Query: 201 IDLKNGTMMIRRNLAKDR---FTVPKTQA-GTNRVIHLIKPAIDALRSQMTLTRLSKEHI 256 +DL GT I R+L + R TV T+ ++R I L +++L++ + Sbjct: 253 LDLDGGTATIHRSLQRTRSQGLTVLNTKTLASDRRIALPTECLNSLKTHQERQQ------ 306 Query: 257 IDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQ 316 R+ T VF G ++ + + + A LR + + Sbjct: 307 ---EERQTAGTSWTDNGLVF-------TTPNGQPLDPTNLTRRFRRLLHGAELRTIRFHD 356 Query: 317 SRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEF-AP 375 RH+ A L G + I +GHA + VY + + L + LS AP Sbjct: 357 LRHSTATLLLEQGVDLVVIKELLGHAHIGVTAGVYAHVRLRLQHQAIDTLGSILSPTDAP 416 Query: 376 TMPHNEAM 383 P A+ Sbjct: 417 DDPSTAAV 424 >UniRef50_C3EB65 DNA integration/recombination/invertion protein n=1 Tax=Bacillus thuringiensis serovar pakistani str. T13001 RepID=C3EB65_BACTU Length = 367 Score = 210 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 76/349 (21%), Positives = 151/349 (43%), Gaps = 36/349 (10%) Query: 35 RQDLTIKELAEKFL-ALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVR 92 Q + K+ +++ +T + KT+L Y ++ +I+ ++G K + Sbjct: 47 PQKMLFKDFFAEWIQKYAKTNLQKTTLFNYIHILDTHIIPVLGNKKV------------- 93 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 +++ T + + + + G + T+N+ T + +F+ + G++ NP G+S LK Sbjct: 94 EDIKTIHLVTLFHGKLPAKGLATTTINSIHTRVKMLFKKACEWGFIKKNPMDGVSKLKNK 153 Query: 153 RTIPDPLSREEFIRLIDACRNQQA--KNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 R P ++E ++++ ++ K L+ +++ TG+R GEL L W ID +N + I Sbjct: 154 RQELQPYDQKEIVKILALTEQEKDMNKMLFQLAIVTGMRRGELLGLEWGHIDFQNDMVHI 213 Query: 211 RRNLAKDRFTV----PKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 ++ + + + PKT + + R+I + L+ + D+ Sbjct: 214 QQTIVRAGKEILLKEPKT-SKSKRIISIPPTFTTKLKQYKKYCAEKRIACGDL------- 265 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL 326 E ++ F+F G T + W ++ GLRH K + R T+A + L Sbjct: 266 WEGEEHLFLFS-------TWNGRPLTPEKASTRWQYFTQKHGLRHIKLHGLRSTHATYLL 318 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAP 375 T G N I+ ++GH+D Q +Y + E N T L+ P Sbjct: 319 TQGENLKVISERLGHSDIQTTMNIYAHVLEEVNKKASNHFETLLTHTMP 367 >UniRef50_A8FW51 Putative pore-forming cytotoxin integrase n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FW51_SHESH Length = 381 Score = 210 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 80/333 (24%), Positives = 152/333 (45%), Gaps = 21/333 (6%) Query: 40 IKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGY 99 + A+++LA + + A ++ + + +KN++S G+K + S I++ + + ++ + Sbjct: 8 FNDYAKQYLAESKFDKAHSTYVSECSKVKNLVSFFGKKQIRS-ISQSDIKRWKIKVHRRF 66 Query: 100 QIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPL 159 S T+N + T L A+F + + L NP G+ LK P PL Sbjct: 67 --------------SNKTINEHFTILRAIFSCALSDCVLGRNPMTGVENLKIHTAEPKPL 112 Query: 160 SREEFIRLIDA-CRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR 218 REE ++L + + K L + V TG+R EL AL W+ ID ++ + + + Sbjct: 113 GREELLKLHATPAQCESGKALLFLGVLTGLRISELIALTWDCIDFESREIKVHTAKVLGK 172 Query: 219 FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQP 278 + VPKT + R + + + A L+ +T + +I V + EK++ +F Sbjct: 173 YKVPKT-TSSIRTVEMNQHAFALLKKHYEVTGSLRPRVIRVLQNDNKTIEKRRVQHLFIN 231 Query: 279 EVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQ 338 S + ++ + + + +A ++HR Q RHT+A LTAG + +IA Q Sbjct: 232 SQSNKPFIDSKQYS----KTFFTPFLVKASVQHRGPNQLRHTFASQCLTAGISKEWIARQ 287 Query: 339 MGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 +GH MV + Y +W+ + A + + Sbjct: 288 LGHNSTNMVDKHYARWLQSDAPDNAAKYSDAMG 320 >UniRef50_C8X726 Integrase family protein n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X726_NAKMY Length = 371 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 67/351 (19%), Positives = 134/351 (38%), Gaps = 38/351 (10%) Query: 24 SSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASS 82 + R + LT++ ++L + V +++ Y + + +I+ IG K L+ Sbjct: 54 NDRAAKNMPAPPPSLTVEAYLGEWLTHMKQHVRRSTWVAYESNARLHIVPRIGRKKLSQ- 112 Query: 83 INKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNP 142 L+ + + + G+ TV L A + + N Sbjct: 113 -------------LSVRDVRLMIDGLRKDGKGKRTVQYVHATLRAALEHAYREELVTRNV 159 Query: 143 FKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDID 202 K + + + T +PLS E RL+ A R+ + LW V + G+R E+C L W+++D Sbjct: 160 AKMVRVERPTPTPKEPLSVAEARRLLTATRDDEDHALWVVMLLLGLRRSEVCGLRWDNVD 219 Query: 203 LKNGTMMIRRNLAK---DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDV 259 L+N T+ + ++ + +P + R + L AL + + +++ + Sbjct: 220 LENRTLSVTHSVQRVDGKLRELPTKTRRSTRTVPLPAMVHQALVTHRAAMMPTSQYLPEP 279 Query: 260 HFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRH 319 +VF ++ G ++ + W +R G+R + RH Sbjct: 280 -------------VYVFGTKI-------GTPMEPRNLTRRWVTLAERQGIRRVPLHALRH 319 Query: 320 TYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + L G +P + +GH+ +M VYG E + L+ L Sbjct: 320 SCVSLLLAQGVHPRTVMEIVGHSAIEMTMNVYGHVNLETQRRALDELDRTL 370 >UniRef50_Q2JGT4 Phage integrase n=4 Tax=Frankia RepID=Q2JGT4_FRASC Length = 431 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 78/355 (21%), Positives = 138/355 (38%), Gaps = 39/355 (10%) Query: 38 LTIKELAEKFL-ALKETEVAKTSLNTYRAVIKNIL-SIIGEKNLASSINKEKLLEVRKEL 95 T++ +L + ++ Y +++N L IG+K L + +N + + K + Sbjct: 95 WTMERFLTYWLSDIVTPACKPRTVQGYEVIVRNYLIPAIGKKRL-NKLNGVDVRNLLKRV 153 Query: 96 L---------TGYQIPKSNYIVTQPGR------SAVTVNNYMTNLNAVFQFGVDNGYLAD 140 T + P GR SA V + L V V + Sbjct: 154 RGTCLCCLHGTDRRRPVKQRRCCAVGRCCHQAPSARLVQQVHSVLRNVLGAAVREELVGR 213 Query: 141 NPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWED 200 N K + + LS ++ L+ A + + L+ +++Y G+R GE+ L WED Sbjct: 214 NVAKLAKVSGPTYKVHRGLSADQASHLLKAAAHDRLYALYVLALYLGLRRGEILGLRWED 273 Query: 201 IDLKNGTMMIRRNLAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHI 256 ID ++ T+ +R +L + R PKT+ + R + L+ LR +E Sbjct: 274 IDFEDETLAVRHSLQRVGGHLRVVAPKTRT-SERTLPLLPLIAKVLREHQARQDAERET- 331 Query: 257 IDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQ 316 DV++RE G FVF + G D++R+ W GL + + Sbjct: 332 ADVNWRETG--------FVFTTAI-------GTPIEPDNLRRSWLPLCGVLGLEGVRFHD 376 Query: 317 SRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 RHT L AG P + GH+ + ++Y ++ A + L +L+ Sbjct: 377 IRHTCVTLLLNAGVPPHVVREIAGHSAIDVTMEIYAHASLDDKRAALQKLVDELA 431 >UniRef50_D1A578 Integrase family protein n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A578_THECD Length = 409 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 73/366 (19%), Positives = 135/366 (36%), Gaps = 40/366 (10%) Query: 24 SSRNLEKFGEA--RQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLA 80 +R + GE R +T+ + +++L E+ +L Y +++ I IG+ L Sbjct: 63 EARVKARRGEYIDRTTITVAQYLDEWLEAHAVEIKPRTLAGYHTMVRLYIKPHIGDLRL- 121 Query: 81 SSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVD-NGYLA 139 ++ ++ ++ ++LL S TV L+ F V + + Sbjct: 122 QAVRPAQITKLYRDLLAS-------GGEGGKPLSVSTVMRVHAILHKAFADAVLVDELIP 174 Query: 140 DNPFKGISPLKE-SRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGW 198 NP + K R + + + A R + + ++ YTG R GEL AL W Sbjct: 175 SNPAERAKRPKGLVREADGIWTPAQLRVFLQAVREHRLFAFYHLAAYTGARRGELLALRW 234 Query: 199 EDIDLKNGTMMI--RRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHI 256 ++DL + I + K R T++G +RV+ + + LR + Sbjct: 235 SNVDLDGKRITIGGSAGVVKGRRIEGTTKSGRSRVVTIDDETVAVLREHRKAQLAEQ--- 291 Query: 257 IDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAG-------- 308 F+ + +VF E G+ DS+ + I+ Sbjct: 292 ----FQAGEAWRGAEDGYVFTTE-------RGEPIHPDSVGWLMTKTIRAYNNPPQGPKP 340 Query: 309 ---LRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVAL 365 L H + + RH +A L AG +A ++GHAD + +VY + A + Sbjct: 341 AEPLPHARVHDLRHIHATTLLLAGVPVHVVAARLGHADPAITLRVYAHVIRSAEVAAADV 400 Query: 366 LNTQLS 371 +S Sbjct: 401 FAKVMS 406 >UniRef50_Q0AUP6 Phage integrase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AUP6_SYNWW Length = 392 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 63/344 (18%), Positives = 128/344 (37%), Gaps = 34/344 (9%) Query: 37 DLTIKELAEKFLALK--ETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKE 94 ++TIK+ +K++ T + ++ +Y + I N ++ + + KL ++ Sbjct: 63 NITIKQYLDKWINAYCTPTNLQPKTIRSYTSTINN--------HIIPHLGRHKLNNLKAA 114 Query: 95 LLTGYQIPKSNYIV-TQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 + Y S G S TV + L+ + V+ YL NP + P +++R Sbjct: 115 HIADYYALMSKSRTEGGAGLSPTTVLYHHRILHQALKHAVNQDYLKQNPVAKVQPPRKNR 174 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 LS E+ LI +Q +++ TG+R E+ AL W+++D N T+ + Sbjct: 175 PDIKVLSVEQARYLIARYSEEQIYLPVFLALMTGMREAEIAALRWQNVDFDNRTLSVTNA 234 Query: 214 LAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 L + PKT+ + R I + + + L+ + +E + + Sbjct: 235 LQRQENRLELKEPKTKK-SRRSIPVPEQVVVVLKKEKERQDCYREILGEG---------- 283 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIK-RAGLRH-RKSYQSRHTYACWSLT 327 + G + + I + W + + + + + RHT+A L+ Sbjct: 284 ------YDCRGFVCAWEDGKPYDPEWIGKQWAKLVASDDKIPNGVRFHDLRHTHATILLS 337 Query: 328 AGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 N I +++GH +Y +L S Sbjct: 338 QNINLKVIQDRLGHESIATTGDIYSHVTPGIQQVAADVLENLFS 381 >UniRef50_A7VZ12 Putative uncharacterized protein n=2 Tax=Clostridium leptum DSM 753 RepID=A7VZ12_9CLOT Length = 414 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 57/339 (16%), Positives = 126/339 (37%), Gaps = 20/339 (5%) Query: 29 EKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEK 87 + GE ++ + +L + + V T+ +Y +++K I K + Sbjct: 70 AEIGELCSNMLFADYLLGWLEIVKVRVKPTTFGSYESMVKQTIEPYFRNKPIT------- 122 Query: 88 LLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS 147 L ++ + + K + +V +Y ++ ++ + +A N + Sbjct: 123 LKDLEARHIQQFYSEKLKTV------KPNSVIHYHAVIHQALKYAMKTDLVAQNVAMKVD 176 Query: 148 PLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGT 207 K++ P L E L D + + + V+ + G+R GE+ L W+ ID + GT Sbjct: 177 RPKKNDFQPVFLDAAELQHLFDVVKGTKLELPVLVAAFYGLRRGEVLGLKWDAIDFERGT 236 Query: 208 MMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRT 267 + I+R + G +VI + + L +E+ +V + Sbjct: 237 LTIKRTVTSVNV------GGKTQVIEQESAKTKSSMRTLPLVGRFREYFAEVKAAQELNK 290 Query: 268 EKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLT 327 + + ++ + V G+ D + + A I+R G++ + + RH+ A L Sbjct: 291 QVCGNCYNYEYDGFVFVDELGERMKTDYLTSQFPAFIQRHGMKKMRFHDLRHSCASLLLA 350 Query: 328 AGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALL 366 G I + +GH+D +Y + + + Sbjct: 351 NGVPLKQIQDWLGHSDFSTTANIYAHLDYSSKLSSAQAM 389 >UniRef50_B0KAT2 Phage integrase family protein n=7 Tax=Clostridia RepID=B0KAT2_THEP3 Length = 373 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 67/343 (19%), Positives = 137/343 (39%), Gaps = 34/343 (9%) Query: 35 RQDLTIKELAEKFLALK-ETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 +T+++ ++L + E + A +L + +++I N + ++ +L +++ Sbjct: 59 PSKITLQQFINEWLKIYGEPKWAPKTLVSNKSLIDNY--------IIPNLGHIELQKLKP 110 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 + + + + S T+N LN V +F V Y+A NP + + K+ + Sbjct: 111 VEIQKFY-----NSLKEKQLSNTTINYVHRLLNQVLKFAVKWQYIAKNPCELVEAPKKDK 165 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 + E + ++ +++YTG+R GE+C L WEDID KN T+ +RR Sbjct: 166 KEFVTWNFEHVKKAKKIFKDTPIYIHVMIALYTGLRLGEICGLRWEDIDFKNQTITVRRT 225 Query: 214 LAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 + F PKT+ +I + + L+ + +K + + EY Sbjct: 226 AQRIDGRFIFKEPKTETSKG-IISIPDFLVQILKQEKNKQLQNKLIFGEKYITEY----- 279 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKR-AGLRHRKSYQSRHTYACWSLTA 328 E V G D + + + +K+ + + + + RHT+A L + Sbjct: 280 ---------EGFISVWEDGRFKEPDYVTKKFRKILKKQSDIPVIRFHDLRHTHATLMLRS 330 Query: 329 GANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 G + I+ ++ H Y E + + L + LS Sbjct: 331 GVDLKIISKRLRHGRISTTADFYSHVDLEMDREALRKLESNLS 373 >UniRef50_B0VUJ0 Putative integrase n=1 Tax=Acinetobacter baumannii SDF RepID=B0VUJ0_ACIBS Length = 356 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 101/366 (27%), Positives = 173/366 (47%), Gaps = 31/366 (8%) Query: 7 VCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAV 66 + I+ G F+ AK FP+S++L+K I A+ +L+ EVA ++ ++YR Sbjct: 18 IKLEIQLGQFNLAKHFPNSKHLKKNQ-------ISYYAQLYLSQTIKEVAPSTYDSYRGH 70 Query: 67 I-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNL 125 + +I+ G+ N IN L + + L + + TV +T Sbjct: 71 VYNHIIPKWGQTN-PKDINTNMLKKWIEVL--------------KENLNNKTVREIVTRF 115 Query: 126 NAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVY 185 + + D + NPF+ I + PDP S+ E +++ + +NL + Sbjct: 116 SQIHAIWRDERQMPYNPFENIVIHQVDTPEPDPFSKVEIAMILNTETDLDIQNLLPCLFW 175 Query: 186 TGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQ 245 TG+ E + WEDIDL+ GT+ I R+ + + V K R I L++PAI+AL+ Q Sbjct: 176 TGLSMSEQIPIAWEDIDLEKGTIQISRSYVRGIYRVTK-NRRRKRRIKLLEPAINALKKQ 234 Query: 246 MTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIK 305 +T ++ I+V R+ +K FV+ +HF +R W+ +K Sbjct: 235 YQITGNARAKTIEVLQRDNKTKRTEKVRFVWINH------ERSNHFEYHELRYRWNKHLK 288 Query: 306 RAGLRHRKSYQSRHTYACWSLTAG-ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVA 364 +A +R R Q RHT+A LT+G P +IA Q+GH+D M+++ YGK ++E+ + Sbjct: 289 KAKVRKRGINQGRHTFASQLLTSGQVPPEWIAEQLGHSDTSMIYKHYGKLIAEDMPDYIT 348 Query: 365 LLNTQL 370 LN + Sbjct: 349 KLNNYI 354 >UniRef50_Q3ABG2 Prophage LambdaCh01, site-specific recombinase, phage integrase family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABG2_CARHZ Length = 371 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 65/341 (19%), Positives = 133/341 (39%), Gaps = 36/341 (10%) Query: 35 RQDLTIKELAEKFLALK-ETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 + +T+KE +L ++ T+ Y A+I ++ +L +VR Sbjct: 59 PEKITLKEFLNYWLENYVRPNLSPTTAYGYEAIIN--------LHIIPFFKNIELQKVRP 110 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 + Y K + S T+ + L+ F F + + +NP + K + Sbjct: 111 IDIQQYYNSKRDE------LSGKTLLQHHRILHKAFDFAMKLQLIPNNPIDFVDSPKAKK 164 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 L +E L++A ++ + +++ G+R GEL AL WED++ + GT+ IRRN Sbjct: 165 YKAKILDLKEIKTLLNALKDTDLEVPINLALSLGLRRGELLALKWEDVNWEEGTIQIRRN 224 Query: 214 LAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 L + PK++ R + L K + L++ K + E Sbjct: 225 LVRAGTKLILKEPKSETSI-RTLKLSKTLLTMLKNHRKKQIELKLMLG---------NEY 274 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG 329 + F+ KN G+ + + +K+ GL + + RHT A L + Sbjct: 275 KDTGFI-------CCKNNGEMINPSTFSHQFSDFLKKHGLPDIRLHDLRHTNATLMLKSN 327 Query: 330 ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 ++++GH+ + +Y +++ + ++ + Sbjct: 328 IPAKIASSRLGHSTVAITLDLYSHVLTDMDEEVANKIDDII 368 >UniRef50_C9RA80 Integrase family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RA80_AMMDK Length = 383 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 67/343 (19%), Positives = 135/343 (39%), Gaps = 31/343 (9%) Query: 35 RQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNIL-SIIGEKNLASSINKEKLLEVRK 93 + +T+ E +++ A ++ +++ + Y +I++ L +G L ++ L + Sbjct: 64 PEKVTLAEYLKEWHAARKHKLSLRTWERYGQLIEHWLIPHLGGIPL-RKLSPVHLEKFIS 122 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 +L +++ + + S TV + LN + V + NP + + +++R Sbjct: 123 AML------EADRLDGKGKISPTTVRHAALVLNKALRDAVKKRLIPYNPMEAVDKPRKAR 176 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 P L E RL+ A ++VYTG R GE+ L W D+D + G + I + Sbjct: 177 KEPPALKEGELRRLMSAAEGTYLYAPITLAVYTGARLGEILGLRWRDVDFEAGCIFILQA 236 Query: 214 LAKD-----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTE 268 L ++ F PKT + R I + + ALR Q L ++ + Sbjct: 237 LKRNLKGELYFDEPKT-PRSRRRIEIGPACLAALRKQKKLQ---------AEWKLKAGSA 286 Query: 269 KQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTA 328 Q+ V + G + + + G+ + RHT+A L A Sbjct: 287 WQETGLVC-------TREDGSPIDPHAFSSAFRKLASKLGI-DANFHALRHTHATMLLKA 338 Query: 329 GANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 G + ++ ++GHA + +Y + L+ +L+ Sbjct: 339 GVHLKIVSERLGHASVAITGDLYSHVLPGMQGGAAQLVEEELN 381 >UniRef50_C8WVH7 Integrase family protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WVH7_ALIAD Length = 391 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 69/344 (20%), Positives = 124/344 (36%), Gaps = 41/344 (11%) Query: 34 ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVR 92 + T+ E A ++ A K + + + TY V++ IL +G+ + S I + + Sbjct: 66 HAKSFTLHEWASRWFADKSSSLRPWTRRTYHHVLQAYILPELGKMPI-SKIEARHIQALY 124 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 ++L VTV+ L V GYL +PF + P + Sbjct: 125 RKLSNR--------------LKPVTVHRIHRVLKTCLLAAVKAGYLDKSPFLNVEPPEHK 170 Query: 153 RTIPDPLSREEFIRLIDACRNQQAKNLW--CVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 LS + RL+ R + + ++++TG+R GE+ L W DIDL G + + Sbjct: 171 TPPKPVLSVNDAFRLLAWLREHRPTSYMAAFLAIHTGMRMGEIAGLQWRDIDLDTGVIQL 230 Query: 211 RRNLAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 R + + F P G+ R I + + +D LR + + Sbjct: 231 ERTRYRPKGGQDFLGPPKTFGSRRRIVVTREVVDELRRWKQSQQEIERES---------- 280 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL 326 + PE + S A K GL + RHT+A W L Sbjct: 281 ---------WTPESFVVRLPNSAPPSPASFNNAIQNARKELGLPPVSFHGLRHTHATWLL 331 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 +G + ++ ++GH+ + +Y + L + Sbjct: 332 ESGVDLKIVSERLGHSSITITADIYAHVTDALQREAIEKLQRMM 375 >UniRef50_C4FP65 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FP65_9FIRM Length = 357 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 64/349 (18%), Positives = 128/349 (36%), Gaps = 39/349 (11%) Query: 28 LEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKE 86 L + +T + E ++ LK V++ +L++Y+ +IK I+ IG L ++ Sbjct: 42 LAQCANYDNTITTERWCEYWIRLKTDTVSQNTLSSYQYIIKTYIVPFIGSIRLV-ELSAL 100 Query: 87 KLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGI 146 + + + SA T++ +T L A+ + V + ++ N + Sbjct: 101 NVRALMDSM---------------SHLSARTISYTLTVLRAILKQAVMDEIISKNVATLV 145 Query: 147 SPLKESRT-IPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKN 205 K+ R LS+EE ++ + + L+ ++ TG+R E+ L W+D++LK Sbjct: 146 KKPKQERKREMVTLSKEEVETFLEQIDDVEWHALFKLAFTTGLRRSEILGLTWDDVNLKQ 205 Query: 206 GTMMIRRNLAKDRFTVPKTQ----AGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHF 261 T+ + + + + ++ + + R I L I L T V Sbjct: 206 KTLTVNQTVLRIDEVTTISKTTKNSSSRRSISLDDKTIAELLKLRTC----------VDK 255 Query: 262 REYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTY 321 R + VF + +G+ + G + +RHT+ Sbjct: 256 RRLKAPNWRNNNLVFPGK-------FGNPRDPAKVSLKCKKFATAIGRPDFTMHDTRHTH 308 Query: 322 ACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 A L AG N + ++GH+ Q Y V ++ Sbjct: 309 ATLLLEAGVNFKVVQMRLGHSSYQQTMDTYSHVTPIMEADVVEKISNIF 357 >UniRef50_A4XMV7 Phage integrase family protein n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMV7_CALS8 Length = 332 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 64/344 (18%), Positives = 139/344 (40%), Gaps = 46/344 (13%) Query: 26 RNLEKFGE-ARQDLTIKELAEKFLALKETE-VAKTSLNTYRAVIKNILSIIGEKNLASSI 83 + L+++ + + +T KE + + + V ++ YR ++K L IG K L Sbjct: 23 KILKQYSKVSNSSITFKEFVDYWFEAYASTAVKPSTQKRYRQLLKPALRAIGNKPL---- 78 Query: 84 NKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPF 143 NK K L+++ YI +S T+ L+ +F+ Y++DNP Sbjct: 79 NKVKPLDIQNI-----------YIALAGTQSNCTILKLHRLLHEIFKHAQMWEYISDNPV 127 Query: 144 KGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDL 203 K + P + + D E R ++ +++ ++++TG+R GE+ +L W D++ Sbjct: 128 KKVVPPTPEKKVFDVWDVETAKRFLEIIKDEPIYYPALIALHTGMRAGEILSLKWCDVNF 187 Query: 204 KNGTMMIRRNLAKDRFTVP---KTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVH 260 + + I ++ K+R KT+ + R +++ L++ +T+ Sbjct: 188 ETRVISIVKSERKNRGLKTVNLKTKT-SKRAVYMNDILYKELKNLYEITKPK-------- 238 Query: 261 FREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHT 320 P+ + + TV+ + + + +K+ + + RHT Sbjct: 239 -----------------PDDFVCPRLPTGNLTVNYLSRKFKKLVKKHNFPLIRFHDLRHT 281 Query: 321 YACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVA 364 +A L+ G N +A +GH+D ++ Y + + Sbjct: 282 FATLMLSLGVNTKIVAEILGHSDIKLTADTYSHVLPTMQEEAMK 325 >UniRef50_A4ILC8 DNA integration/recombination/invertion protein n=1 Tax=Geobacillus thermodenitrificans NG80-2 RepID=A4ILC8_GEOTN Length = 387 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 74/344 (21%), Positives = 137/344 (39%), Gaps = 29/344 (8%) Query: 37 DLTIKELAEKFLA-LKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKE 94 +++ + + + E +++ + TY I I+ +G LA I L+ Sbjct: 63 KMSLSDFIQLWRDNYAEKQLSPKTFETYNNYINTRIIPQLGHLQLAD-IKPIHLIRF--- 118 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRT 154 L + ++ + S T+N Y L +F V+ +L NP + + KE Sbjct: 119 -LNNLKKDETRLDGKKGSLSEATINYYRRILKNIFNRAVEWKFLQVNPAEKLPKEKEDIG 177 Query: 155 IPDPLSREEFIRLIDACRNQ--QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 D E L+ + + + + +++ G+R GEL AL WEDIDL++GT+ ++ Sbjct: 178 KGDVYDENETRLLLKCLEKEDLKWRLYFTLALTCGLRKGELLALQWEDIDLESGTLYVKH 237 Query: 213 NLAKDR-----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRT 267 +L+ + PK++ + R I + + L+ + KE + D Sbjct: 238 SLSYTKEKGFFLKEPKSKK-SKREIAIPSFVLPLLKKYKNVRLREKEKLQD-------EW 289 Query: 268 EKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLT 327 E FVF G R W+ +KR LR+ + + RHT A L Sbjct: 290 EGGNYNFVF-------ATWNGKPHHHSYPRTKWERFLKRNNLRYIRPHDLRHTSATIMLN 342 Query: 328 AGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 G N ++ ++GH+ ++ F Y E + + + Q Sbjct: 343 NGVNYKTVSERLGHSSTRITFDFYVHRTKEADRSAAECFDNQFG 386 >UniRef50_D1BL69 Integrase family protein n=1 Tax=Veillonella parvula DSM 2008 RepID=D1BL69_VEIPT Length = 403 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 74/378 (19%), Positives = 148/378 (39%), Gaps = 43/378 (11%) Query: 12 KTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFL-ALKETEVAKTSLNTYRAVIK-N 69 K V+ KQ+ + + ++ +K++ +L +K+ V + Y + ++ Sbjct: 45 KLEVYKLGKQWIEATQQNTSIFSSKNTKLKDICNYWLQDVKKVSVKPKTFQKYDSTLRLY 104 Query: 70 ILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVF 129 IL ++GE +AS I +++ V G K +I+ S+ T+ L+ +F Sbjct: 105 ILPLLGEIKIAS-ITPQQVQTVLNNWSNGTLKGKKGHII-----SSSTIRCTRRYLSELF 158 Query: 130 QFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNL---------- 179 ++ V+ G L NP K + T LS +E +L + Q + N+ Sbjct: 159 EYAVNIGLLLKNPIKLTKAPRLITTEIHTLSLDEIHQLTSTMKQQVSNNISSPYRINYYS 218 Query: 180 ----WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRV 231 +++ TG+R GE+ L W+ +DL +G + +RR + F KT+ + R Sbjct: 219 SYIATKIALGTGMRLGEVFGLCWDCVDLIHGHISVRRTIQTGTKGQIFQDTKTKT-SRRC 277 Query: 232 IHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHF 291 I + + L + + + D YG +G Sbjct: 278 IPISQELQSELTTYKEFQSNYAKELGDKWTDSYGVVIS---------------GTFGKIL 322 Query: 292 TVDSIR-QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQV 350 + + + + + +K+ L H + RHT+A L+ NP + ++GH+ + Sbjct: 323 STSNFKSRYFIPILKQLNLDHITFHDLRHTHATLLLSQKINPKIVQERLGHSTITLTLDT 382 Query: 351 YGKWMSENNNAQVALLNT 368 Y + + V L+ Sbjct: 383 YSHLVPDIQKEAVKALDN 400 >UniRef50_Q859R3 ORF39 n=1 Tax=Thermus phage IN93 RepID=Q859R3_9VIRU Length = 349 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 70/339 (20%), Positives = 120/339 (35%), Gaps = 39/339 (11%) Query: 35 RQDLTIKELAEKFLALKE--TEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVR 92 L + + ++ + ++ T+L Y +K++ I L S + Sbjct: 20 PSGLRLGDYLASWIEHRAATRDLRPTTLRNYHVYLKHVEP-IAHLPL-SRLTPLTFRAFF 77 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 EL G S + L A + + L NP + P + Sbjct: 78 AEL---------------AGFSPSHRRHIYQFLRAALRDAMRADLLDQNPMDAVDPPRGG 122 Query: 153 RTIP-DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 P EE R ++A + + L+ + + T +RPGE AL WED + + +R Sbjct: 123 AVRPAKAWKPEEVARFLEASKGHRLYPLFALMLATRLRPGEALALRWEDW--EGDVLHVR 180 Query: 212 RNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 L +D P G+ I+L L K D Q Sbjct: 181 HTLRRDGTLGPAKTPGSVAPIYLDPDTQALLAWWRERLEEEKASTPD----------WQD 230 Query: 272 CTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGAN 331 +F G ++ ++ + A ++AG+ + RHTY +L AG Sbjct: 231 HGLMFPSSK-------GTPLEYNNFKRAFYALQEKAGVSRITPHGLRHTYTSLALRAGLP 283 Query: 332 PAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 P +A ++ HAD +VY + M E++ A L+T L Sbjct: 284 PKVVAARLRHADPTFTVKVYQQLMEEDHRAGALPLDTLL 322 >UniRef50_Q3Z6H5 Site-specific recombinase, phage integrase family n=1 Tax=Dehalococcoides ethenogenes 195 RepID=Q3Z6H5_DEHE1 Length = 386 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 65/341 (19%), Positives = 125/341 (36%), Gaps = 39/341 (11%) Query: 39 TIKELAEKFL-ALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLT 97 T+ E + +L + ++ ++ Y S I K++ ++ ++E++ + L Sbjct: 64 TMYEYMQSWLNDYCKPNLSPRTVELY--------SYISTKHIIPTLGNIPIVELKPQHLQ 115 Query: 98 GYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPD 157 K ++ G S TV L+ + V G L+ N + + K R Sbjct: 116 HLYADKQSF-----GLSNRTVQIIHVVLHKALKNAVKTGLLSRNIAEAVDAPKIQRHEMQ 170 Query: 158 PLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-- 215 ++ + L++ + L+ S++TG+R E AL W DIDL + + R++ Sbjct: 171 VMNESDMQVLLEKAKETPYYALFYTSLFTGMRRAECLALRWSDIDLILCQVYVLRSMQYV 230 Query: 216 -------KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTE 268 + F PKT + + R I L + LR ++ + + Sbjct: 231 QDADLGKRITFKEPKT-SKSRRQIALSPSNVIILREHYQDQSELRKTLNLPGLTD----- 284 Query: 269 KQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTA 328 VF G +S+ W +R GL + + +RHT+A L Sbjct: 285 ---SDLVFSHY-------DGSPLLPNSVTHAWIKLARRCGLNGIRLHDARHTHASLLLKQ 334 Query: 329 GANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQ 369 G +P + ++GH Q+ Y A + + Sbjct: 335 GVHPKIVQERLGHGSIQITLDTYSHVAPGLQQAAASKFDDI 375 >UniRef50_C6UV22 Site-specific recombinase, phage integrase family n=11 Tax=Escherichia coli O157:H7 RepID=C6UV22_ECO5T Length = 162 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 153/154 (99%), Positives = 154/154 (100%) Query: 28 LEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEK 87 +EKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEK Sbjct: 1 MEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEK 60 Query: 88 LLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS 147 LLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS Sbjct: 61 LLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS 120 Query: 148 PLKESRTIPDPLSREEFIRLIDACRNQQAKNLWC 181 PLKESRTIPDPLSREEFIRLIDACRNQQAKNLWC Sbjct: 121 PLKESRTIPDPLSREEFIRLIDACRNQQAKNLWC 154 >UniRef50_C9R814 Integrase family protein n=2 Tax=Ammonifex degensii KC4 RepID=C9R814_AMMDK Length = 391 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 65/356 (18%), Positives = 124/356 (34%), Gaps = 37/356 (10%) Query: 27 NLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKE 86 + + G A + LT+ L ++ +L R + +IG + + Sbjct: 53 HRGELGRAPRGLTVAGLLNAWVEAHRRSWRPNTLANKRTAARAWGRLIGHLEVER-LTPA 111 Query: 87 KLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGI 146 + L Y + T ++ ++ L +P +G+ Sbjct: 112 DVELALARLAEEY--------------APSTAKEVFSSFRQALRWARKRKLLHHDPTEGV 157 Query: 147 SPLKESRTIPDPLSREEFIRLIDACRNQQ----AKNLWCVSVYTGVRPGELCALGWEDID 202 + P + EE R ++ + K + +++ TG+R GEL AL W+D+D Sbjct: 158 PAPRGETQEITPWTGEEAARFLEYLEKARMRKAYKAFFRLALATGMRLGELQALRWQDVD 217 Query: 203 LKNGTMMIRRNLAK--DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVH 260 LK G + +RR ++ F PKT+ R I + LR KE + + Sbjct: 218 LKRGEVCVRRTYSEAGKCFHEPKTKKARRR-IPIDPVTTAWLREWR------KEQLEERL 270 Query: 261 FREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHT 320 G +++ F G D + + A + AG+ + + RHT Sbjct: 271 RAGEGWADREGLVF---------TTRKGTVVDRDDLLRALRRACREAGVPGIRFHDLRHT 321 Query: 321 YACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPT 376 +A L +P + ++GHA + +Y + V + L + Sbjct: 322 HASLLLRQNVHPKVVQERLGHASVKTTLDLYSHLLPGAQEPAVRAVAELLDRRIDS 377 >UniRef50_C1IBC3 Phage integrase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBC3_9CLOT Length = 400 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 151/385 (39%), Gaps = 43/385 (11%) Query: 1 GEL-RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKE-TEVAKT 58 G+L R K V F +N + T+++ + +L + E + Sbjct: 44 GKLIRKQFYGKTKLEVLKKVDDF-KVKNTLGLSTIDEKTTVQQWIKMWLEEYKMNECRPS 102 Query: 59 SLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 +++ Y + +N + +++ KL +++ L Y N ++ + ++ T+ Sbjct: 103 TIDRYFGIYRNYIE-------NTNLGVVKLKDLKPLTLQNY----YNELIKKKNKTTDTI 151 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLK-ESRTIPDPLSREEFIRLIDACRNQQAK 177 L+ + + +NP ++ K + + + EE ++A + + + Sbjct: 152 KIINKVLSGGMRQAQKEQLILNNPCLFVTLPKSKVKEEVMTFTMEEQRIFLNAIEDSRDR 211 Query: 178 NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK----DRFTVPKTQ-------- 225 ++ +++ +G+R GEL AL W DID + + + +++ + D T KT+ Sbjct: 212 CIFNLALGSGLRLGELLALKWSDIDFSSNEVKVSKSVKRVKCFDENTNTKTKIIEQLPKT 271 Query: 226 AGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVK 285 + R I L K I+ L+ + K D++ VF + Sbjct: 272 RYSERKIPLPKATINELKRHKNIILQEKLMAGDIYI---------DNNLVFPNVL----- 317 Query: 286 NYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQ 345 G + ++ + + + + +A + +RK + RHTYA G + I +GH+ Sbjct: 318 --GGYIDARNLTKRYKSILNKANIPYRKFHALRHTYATRLFENGVSLKVIQVLLGHSSMD 375 Query: 346 MVFQVYGKWMSENNNAQVALLNTQL 370 + +Y + + V +L+ L Sbjct: 376 ITANIYTHVLPKEKIRAVDVLDKCL 400 >UniRef50_D1PRY2 Site-specific recombinase, phage integrase family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRY2_9FIRM Length = 391 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 70/346 (20%), Positives = 124/346 (35%), Gaps = 36/346 (10%) Query: 36 QDLTIKELAEKFLALKETE-VAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKE 94 +T+ E +L + +A ++ + + I+ IL +G KL ++RKE Sbjct: 69 HAMTLAAYTEHWLRDIAPDKLAASTYSRDQQDIRRILPALGH---------YKLTDLRKE 119 Query: 95 LLTGYQIPKSNYIVTQPG--RSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 + + + G S +V L ++ VD GYL NP + K Sbjct: 120 TIRAFYEAMRSEPKLTDGQPLSERSVEGLHNTLCSILSGAVDEGYLTHNPAWRVYKPKGV 179 Query: 153 RTIPDPLSREEFIRLIDACRNQ--QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 R E ++I A Q + + + + + TG+R GE C L W DID ++ T+ + Sbjct: 180 RKERPVADEETVQKMIAALETQSMKYEVYFKLVLATGMRRGEACGLRWSDIDWRHRTIHV 239 Query: 211 RRNLAK-----DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 +R + K PKT +G NR +++ K L++ E E Sbjct: 240 QRTVVKLSGQKIFTKEPKTASG-NRRVYISKEMCKLLKAWKQECAWQMEQAEGQTLTE-- 296 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLR-HRKSYQSRHTYACW 324 E + GD + + +K GL + + RHT A Sbjct: 297 -------------EDYLFRQPSGDPMVPTTFTFRFKKILKENGLPQNLSVHSLRHTNASL 343 Query: 325 SLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + G + +A +GH+ +Y + L + Sbjct: 344 LIAQGVDVRTVAGLLGHSQPSTTLDIYAHAFDKTKREAQEKLGKVM 389 >UniRef50_B7AAK4 Integrase family protein n=3 Tax=Thermus aquaticus Y51MC23 RepID=B7AAK4_THEAQ Length = 416 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 79/365 (21%), Positives = 138/365 (37%), Gaps = 47/365 (12%) Query: 22 FPSSRNLEKFGE------------ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKN 69 FP+ R E + + + +T+++ A+ +L K EV +L YR + Sbjct: 43 FPTKREAEAWRQEMALKHFRGLLAPPEAITVRDFAQSWLERKAREVRPRTLFLYREELAY 102 Query: 70 ILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVF 129 L + + + + +L V + N G S TV LNA+F Sbjct: 103 ALPSLEDPQAKDPLGRARLQAVNPRDIRAVIDGLLN-----RGLSLRTVKKVREKLNAIF 157 Query: 130 QFGVDNGYLADNPFKGISP---LKESRTIP----DPLSREEFIRLIDACRNQQAKNLWCV 182 + + +A NP + L++ R P + E + +DA + + + + Sbjct: 158 EEALALELVARNPVAPVKVRGGLEQEREKPGRTLETWEIEALLAALDAHPDPRTALVLRL 217 Query: 183 SVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA----KDRFTVPKTQAGTNRVIHLIKPA 238 + G+R GE L WEDIDL+ G + +RR + + + PKT +G R + + Sbjct: 218 CLSCGLRKGEALGLQWEDIDLEKGLLYVRRTWSFDGARTAISDPKTASG-RRAVPIPSKT 276 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 + L S +RE + +VF N + ++ + Sbjct: 277 LARLESYREW------------WRERLGSYPPPSFWVFPG------VNGQEPLGYNTPNR 318 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 +KR GL + + RHTY L GA ++ +MGH + F Y SE Sbjct: 319 ALTRILKRLGLPPARVHDLRHTYGSMLLARGAPVELVSERMGHTSPSITFNNYRHMFSEE 378 Query: 359 NNAQV 363 A + Sbjct: 379 RQAHI 383 >UniRef50_D1XEM4 Integrase family protein n=1 Tax=Streptomyces sp. ACTE RepID=D1XEM4_9ACTO Length = 435 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 66/364 (18%), Positives = 130/364 (35%), Gaps = 38/364 (10%) Query: 40 IKELAEKFLA-LKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLT 97 + +L + ++ + + Y + +++ +G+K + + + + +L T Sbjct: 79 VSAYLTYWLEAVAVHQLRENTHTRYTTCVNQHLIPGLGKKK-LAKLTAKDVRTWLNQLRT 137 Query: 98 GYQIPKSNYIVTQ-------------PGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFK 144 Q + S +T+ + L + + V + N + Sbjct: 138 TCQCSVRAIDAHRDQPRCCAAGTCCSKRLSPLTLAYIHSVLKSALEHAVREEEITRNVAR 197 Query: 145 GISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLK 204 + +PL+ +E + + A RN + L+ +++ G+R GEL L W+D+DL Sbjct: 198 NVRTGTPRPRRFEPLTADEARQFLAAVRNDRLFALYELALRAGLRKGELLGLQWKDLDLH 257 Query: 205 NGTMMIRRNLAKDRFT----VPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVH 260 NGT IRR L + + +P + R I L I + + + Sbjct: 258 NGTASIRRTLQRTQTGGLTALPTKTRASERRIALPSECIHSFKEHRAVQE---------G 308 Query: 261 FREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHT 320 R+ + VF+ G ++ + + ++RAGLR + + RH+ Sbjct: 309 ERKAAAEGWKDNGLVFRTSA-------GGPIDPANLNRSFHTLLERAGLRRIRFHDLRHS 361 Query: 321 YACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE--FAPTMP 378 A L G I +GHA + VY V L++ L+ A P Sbjct: 362 TATLLLEQGVELVVIKELLGHAHIGVTATVYAHVRLRLQRQAVETLSSTLAGPTNAEAAP 421 Query: 379 HNEA 382 Sbjct: 422 DGSE 425 >UniRef50_C4LFZ6 Integrase family protein n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LFZ6_TOLAT Length = 394 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 88/377 (23%), Positives = 149/377 (39%), Gaps = 46/377 (12%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEARQD--------LTIKELAEKFLALKETEVAKTSL 60 I G F++ K FP+S E F + + E AE + K+ E + Sbjct: 47 AQITLGQFNFCKTFPNSSQCEYFHKIAHREELLKAGCPSFAEFAETWYQEKQVEWRTSQR 106 Query: 61 NTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 T R ++ ++L G + + I K ++L R + SA VN Sbjct: 107 ETIRNILDIHLLPSFGLMPV-NHIGKTEILSFRNYVTQL-------KGRGDKQISASRVN 158 Query: 120 NYMTNLNAVFQFGVDNGYLADNPF--KGISPLKESRTIPDPLSREEFIRLIDACRNQQAK 177 + MT L + D D P K I +K R+ PL+ E RL+ R K Sbjct: 159 HIMTPLRMILNEASDR---FDFPAVWKQIKSMKVPRSDVMPLTLAEIERLLLVVRKD-FK 214 Query: 178 NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKP 237 + V +TG+R E+ L W +D + +++ + + KT G+ R + + Sbjct: 215 PYYTVRFFTGLRSSEIHGLTWRHVDFERCQILVYQAYVRGELISTKTD-GSYREVQMSLR 273 Query: 238 AIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIR 297 +AL +Q ++ ++ FVF V +++ + Sbjct: 274 VYEALLAQYKMSGQNRSI----------------DDFVFCSSVGTALED------RNVAN 311 Query: 298 QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 ++W + GL RK YQSRHT A L++G +P +IA Q+GH M+F+VY +++ Sbjct: 312 RVWYPLLALLGLEKRKPYQSRHTTATLWLSSGESPEWIARQLGHVSTNMLFRVYSRYVPN 371 Query: 358 NNNAQVALLNTQLSEFA 374 LS + Sbjct: 372 MTGRDGTAFEQMLSTSS 388 >UniRef50_Q8R890 Tyrosine recombinase xerC-like n=5 Tax=Clostridia RepID=XERCL_THETN Length = 391 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 77/355 (21%), Positives = 140/355 (39%), Gaps = 46/355 (12%) Query: 36 QDLTIKELAEKFL-ALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKE 94 QD+T+ +L +L + + Y +N I +L ++ Sbjct: 62 QDVTLGDLMHTWLFEVVRMSRKPATFVKYEGHYRNY------------IKNSELYGMKIS 109 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS------P 148 ++ QI + + Q G+S+ T+ L F + VD GYLA NP G P Sbjct: 110 IIKSIQIQRYYNKLYQQGKSSKTIKALNNFLKTFFNYAVDEGYLAKNPCTGKKIVIPGTP 169 Query: 149 LKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTM 208 ++ T + S EE ++ +A + + K L+ ++ TG+R GEL L W DID + + Sbjct: 170 EEKIETEIETFSDEEIKKIKEALKGHRLKALFLLAFGTGLRQGELLGLKWTDIDFEKKEL 229 Query: 209 MIRRNL-------------AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEH 255 ++R + K +PKT+ R + + I L+ R K Sbjct: 230 RVQRMIKQVTIIDEKGNRKYKTIEQIPKTKNSI-RTVPIPSSLIPMLKEHRNRQREEKLK 288 Query: 256 IIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSY 315 V+ + + +VF E+ G+ ++ + + + RAG+ +RK + Sbjct: 289 AGSVYLNDVEK------GYVFTTEL-------GNTIDASNLLKTYKKILNRAGVPYRKFH 335 Query: 316 QSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 RHTYA G ++ +GH++ + +Y + + V LN Sbjct: 336 AIRHTYATKLFERGVPLKTVSELLGHSNISITANIYTHVIPKQKTNAVETLNDLF 390 >UniRef50_D2SBK5 Integrase family protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SBK5_9ACTO Length = 365 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 76/345 (22%), Positives = 132/345 (38%), Gaps = 50/345 (14%) Query: 35 RQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRK 93 R +T++ AE++LA + T + ++L YR++++ IL G LA I + Sbjct: 60 RGRVTVEAWAEQWLAAQ-TGLKPSTLYRYRSLLRAQILPRWGRHRLAD-ITHADVAAWVA 117 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 +L+ G G + TV L + V +G + NP G+ + R Sbjct: 118 QLVAG-------------GLAPPTVRQAHRVLALILTLAVRDGRIPRNPAAGVPLPRTRR 164 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 P L+REE RL DA + ++ + YTG+R GE+ AL +D + + + Sbjct: 165 ADPRFLTREEVERLADAAG--EYGDVVRLLAYTGLRFGEMAALRVRRVDFLRRRLTVAES 222 Query: 214 LAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 + + PKT R + + ++ L + K Sbjct: 223 ATEVGGTVEYGTPKTH--QQRTVPIPAVLVEPLSRRC--------------------GGK 260 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG 329 + V A ++ + + R+ +D A K AGL + RHT A + +G Sbjct: 261 GRDDLVLTSPGGAVLR------SGNFRRRFFDPAAKAAGLEDLSPHDLRHTAASLLVASG 314 Query: 330 ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFA 374 AN + +GHA A M VY ++ A ++ Sbjct: 315 ANVKAVQRMLGHASAAMTLDVYSGLFDDDLGALADRMDAAHEASV 359 >UniRef50_A6P1V8 Putative uncharacterized protein n=2 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P1V8_9BACE Length = 409 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 56/346 (16%), Positives = 132/346 (38%), Gaps = 36/346 (10%) Query: 33 EARQDLTIKELAEKFLALK-ETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLE 90 +D T+ E + + + + TY +I +I+ IG L + ++ + Sbjct: 65 NHNEDYTVAEWCRLWFETYSKPVIRPNTAKTYENMIENHIVPAIGGVKL-KRLTAIQIQK 123 Query: 91 VRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK 150 + + T ++ + T S TV L++ + V + NP Sbjct: 124 MYNDSKTNGRVQRFE-KKTDTALSGSTVRRIHMVLSSALKQAVKERIIPYNPCDNCRIPP 182 Query: 151 ESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 + + + E+ + ++ + + +G+R GEL AL W+D+++K+ + + Sbjct: 183 KEKKEMAIIPSEKLGVYLSEAEKYGVLPMFFLELSSGLRRGELLALRWDDLNVKDRILSV 242 Query: 211 RRNLAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 + + + T PKT+ + R + L + A+D L + Sbjct: 243 SKQVTRIDGELVITEPKTKN-SVRKVALSQQAVDILVREH-------------------- 281 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHR-KSYQSRHTYACWS 325 E+ + P G +++ D++ ++ + +AG+ R + + RHT+A + Sbjct: 282 -EQHPDNPILFPSP-----RTGGYWSPDAVSRINRKLLAKAGIEERVRFHDLRHTFATMA 335 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 L++G + +++ +GH A Y ++ + + Sbjct: 336 LSSGVDVKTLSSMLGHYSAGFTLDTYTHITNDMQRGAAEKIGGFME 381 >UniRef50_C2Z776 Prophage LambdaBa04, site-specific recombinase, phage integrase n=10 Tax=Bacillus cereus group RepID=C2Z776_BACCE Length = 379 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 66/343 (19%), Positives = 135/343 (39%), Gaps = 29/343 (8%) Query: 36 QDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKE 94 + L++ ++ K +++ E+ TS +++K IL G K + S ++ Sbjct: 61 KQLSVLDIWGKLKPIRKAELKITSYEKDMSLVKLYILPTFGYKKIKS---------IKPV 111 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRT 154 ++ Y + + G S T++N +F+ V+ L DN + +E + Sbjct: 112 IIQSYYAE-----LKEKGLSNGTISNIHRCFRCIFKHAVEWEILHDNIMNKVKKPREEQG 166 Query: 155 IPDPLSREEFIRLIDACR--NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 S +E R + + N++ + +++YTG+R GEL AL W+DID N +++ + Sbjct: 167 EMKTWSSKECNRFLHYLKEKNKKYYIFFLLAIYTGMRRGELLALTWKDIDFDNKRILVNK 226 Query: 213 NLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKC 272 +L K + K T I + + + K+ F +G ++ Sbjct: 227 SLVKTEEGLFKAATKTKSSNRSISISSFVVTELQSYYAYKKK-----EFFRWGIHLNEE- 280 Query: 273 TFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANP 332 ++F +D+ + K+AG+ + + RHT+A L AG +P Sbjct: 281 AYIFAG------NTIHSPLHIDAPHRFLKDHYKKAGVPRIRIHDLRHTHATLMLQAGEHP 334 Query: 333 AFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAP 375 + +++GH+ QM Y + + Sbjct: 335 KIVQDRLGHSSIQMTLDKYSHITQNMQQQAAENFENVIKPYEK 377 >UniRef50_UPI0001C37D82 integrase family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37D82 Length = 339 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 70/338 (20%), Positives = 139/338 (41%), Gaps = 28/338 (8%) Query: 36 QDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 Q T++E E++L + + T+ Y + +N ++ + +L ++ +E Sbjct: 24 QKFTLREWNERWLNIYCKAIKTTTKEAYISYTEN--------HINRVLGDIELCKLSRED 75 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 + + S I + S ++ N L+ VDNGY+ NP K K ++ Sbjct: 76 VQLFLNSLSLGIGLEKALSPKSIKNIHGILHKSLDVAVDNGYILANPAKKNDLPKIKKSE 135 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 LS EE + + A + Q + L+ ++++TG+R GE+ L W+ I+ + G + + R L Sbjct: 136 VHALSVEEIKKFLIAIKGCQMEYLFKITLFTGMRAGEIMGLTWDCINFEEGYISLYRQLV 195 Query: 216 KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFV 275 R PK+ +L++ + ++++ F+ EK+ FV Sbjct: 196 --RIKNPKSDN--------YYYTFSSLKNGRSRRLYPPMFVMNMLFKM---KEKKTSDFV 242 Query: 276 FQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFI 335 F + +HFT +I + G+ + + RHTYA S+ + + + Sbjct: 243 FCNSEN-------NHFTHSAIYNSLKRITGKIGITDFRFHDLRHTYATISIRSDVDTMTL 295 Query: 336 ANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEF 373 MGH A VYG + ++ +++ Sbjct: 296 KENMGHHSAAFTLDVYGHCDRRMKLEGTSKIDRFITDN 333 >UniRef50_A8ZS80 Integrase family protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZS80_DESOH Length = 403 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 82/329 (24%), Positives = 142/329 (43%), Gaps = 51/329 (15%) Query: 38 LTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELL 96 +T E+A+++ ++ + EV ++ Y + + +IL + +A I +L+ R L Sbjct: 72 ITFGEVAKEWASIHKKEVRYSTWPDYVSSMNGHILPNFKDMPIA-EITYGDVLKFRSGLK 130 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP 156 G A NN + + +VF + G + DN + I L E Sbjct: 131 VG----------------AKRANNILVPMKSVFDYADREGIIQDNVMRKIKRLSEEAPEI 174 Query: 157 DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDI---DLKNGTMMIRRN 213 P S +E RL+DA + + V+ +TG+R GE L W D + IR+ Sbjct: 175 HPFSYDEVNRLLDAV-HPWYQPYLIVAFFTGMRAGEQNGLCWSDFLEDMQPEPRIFIRKT 233 Query: 214 LAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCT 273 + +PKT+ + R I + ++AL Q LT +K + + Sbjct: 234 YVYKKDGIPKTKK-SKRYIKCLPQVLEALSEQRKLTGKNKHIFLTI-------------- 278 Query: 274 FVFQPEVSARVKNYGDHFTVDSIRQ-MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANP 332 G T D IR+ +W A+++AG+ +R Q+RHT+A L+AG + Sbjct: 279 -------------DGRRMTPDHIRKEVWIPALEKAGIEYRPPIQTRHTFATMMLSAGEDI 325 Query: 333 AFIANQMGHADAQMVFQVYGKWMSENNNA 361 ++ N +GH+ QM+FQ Y W+ E + Sbjct: 326 GWVQNMLGHSSLQMIFQRYYAWVPEKTRS 354 >UniRef50_A7B6B9 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7B6B9_RUMGN Length = 387 Score = 201 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 64/357 (17%), Positives = 134/357 (37%), Gaps = 40/357 (11%) Query: 37 DLTIKELAEKFLA-LKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 ++T+ + +L K+ + +++ Y + + I K+++ + + Sbjct: 50 NITLDTWFDIWLNTHKKRTIKESTQVRYDDFYRRYIK--------KQIGKQRVADFNPII 101 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 L + S T+ + LNA+F++ V N L NP G+ K Sbjct: 102 LERLLQN-----MADDDYSTKTIRDVYNILNAMFKYAVHNRILTFNPCAGVEVPKTKTKQ 156 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 L+ +E +++ + + +NL V++ TG+R GEL L W+D+D + + + + L Sbjct: 157 IRVLTVKEQREVLEHAKERIHENLIQVALGTGMRGGELLGLTWDDVDFRKREISVNKTLV 216 Query: 216 KD----------RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 ++ PKT+ R I + AL+ Q +L + + ++ Sbjct: 217 YIKDKETKKYVFKYQTPKTKNSI-RTIPMQDSVYKALKRQ--WIQLKEMQLSASEWQPLE 273 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAG---------LRHRKSYQ 316 E VF + + + T+D I + + K+ + H + Sbjct: 274 GFE----NLVFVGKNGKPITEHTFQVTLDWIEKSINKERKKQAEKNKTVFIPIPHFYPHA 329 Query: 317 SRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEF 373 RHT+A AG + + +GH + +Y + +++ L E Sbjct: 330 LRHTFATRCFEAGIDAKVVQGFLGHYSIAITLDLYTHVTDDKAKSEMDKLQNLYKEI 386 >UniRef50_C5UVC6 Site-specific recombinase, phage integrase family n=2 Tax=Clostridium RepID=C5UVC6_CLOBO Length = 385 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 68/362 (18%), Positives = 137/362 (37%), Gaps = 29/362 (8%) Query: 18 YAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKT--SLNTYRAVIKNILSIIG 75 +A Q +N DL K K+ + T + + + N Y + I Sbjct: 43 FATQILDKKNHGFVSPTDSDLLFKNFIMKWYDMHTTSLKLSVNTRNDYLSRIN------- 95 Query: 76 EKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDN 135 NL + K+ ++ +++ + N ++ + TV Y+ L++ ++ Sbjct: 96 -TNLIPLLGNYKIKDISIDVVQNF----YNTLINEKHLKPTTVKKYLDILSSCLKYAQSK 150 Query: 136 GYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCA 195 + P I +K + + ++EE ++ +N + + TG+R GELC Sbjct: 151 DLIYKLPTSYIKKVKIQKPKIEYWNQEEVNFFLNYIKNTYLYTPIFIDILTGLRIGELCG 210 Query: 196 LGWEDIDLKNGTMMIRRNLAKDR-----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTR 250 L W D+DL+NG + + L D+ + ++R I + K ID L+ + Sbjct: 211 LRWCDVDLQNGIITVNHQLIHDKRLKVLLLADLKTSSSHRSITIPKILIDYLKELKANRQ 270 Query: 251 LSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDH-FTVDSIRQMWDAAIK-RAG 308 + EY ++Q ++ + K + ++D ++ + Sbjct: 271 ATN--------TEYVVLDRQDFKYIPRSLSMNFTKKVAKYKKSIDDFKKANEEVPHGYMQ 322 Query: 309 LRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNT 368 L+ + RHT+A + G N ++ ++GH D +M Y + N LLN Sbjct: 323 LKQISFHGLRHTHATLLIANGENVKVVSERLGHTDIRMTLNTYTHVLDSMKNNTANLLNN 382 Query: 369 QL 370 Sbjct: 383 IF 384 >UniRef50_C0EE56 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE56_9CLOT Length = 348 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 125/342 (36%), Gaps = 29/342 (8%) Query: 37 DLTIKELAEKFL-ALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 ++ + A+++ E ++ + ++ YR + + +G ++ I + + L Sbjct: 15 NIKFEVFAKQWFKEYAEVKLRERTIARYRQLEARTYAALGHLHM-DKITVRHVQKFIHNL 73 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 + T + T+++Y++ ++ +F + + + +NP + + K + Sbjct: 74 -----GEEGINQTTGGRLAPKTIHHYLSFVSTIFSYAIKMQMVKNNPCEHVQLPKAEQKE 128 Query: 156 PDPLSREEFIRLIDACRNQ--QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR- 212 D + EE ++ + + + + + +++Y G R GEL L W+DID G + IRR Sbjct: 129 LDCYTLEEAQEFLNLLQKEPLKYQAFFTLAIYGGFRKGELLGLEWKDIDFSTGVISIRRS 188 Query: 213 ---NLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 K FT + R + + + L+ + + + D Sbjct: 189 SLYTKGKGTFTDTTKTKSSQRSLKIADEVLQVLKRYQSQQIFDRARVGDQ---------- 238 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG 329 + K G+ +S +R G R +Q RH A + Sbjct: 239 ------WVDTDRLFTKWNGEPMHPNSPYTWLKRFCERTGQRFLGVHQFRHLNATLLINNR 292 Query: 330 ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + I+ +GH +Y E+ +++ LS Sbjct: 293 VDAKTISASLGHTQVSTPLNIYAHTFQESQAKASEVISNALS 334 >UniRef50_A4J0G7 Phage integrase family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J0G7_DESRM Length = 388 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 66/371 (17%), Positives = 132/371 (35%), Gaps = 32/371 (8%) Query: 17 DYAKQFPSSRNLEKFGEA------------RQDLTIKELAEKFLALKETEVAKTSLNTYR 64 Y F R+ + F + + E +L K+ ++ TS Y Sbjct: 30 KYKGGFKKERDAKLFAAQLTVNISQGTHIEPNKMFLFEYLNNWLEEKKETISPTSYCGYE 89 Query: 65 AVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 I+ +I IG L S + + + +L +I + S ++ Sbjct: 90 VNIRCHINPYIGGIKL-SDLRAAHIRGLYSKLQKAREIKIDGEKRSFKPLSGTSIRYVHR 148 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVS 183 L+ + + NP K ++P +++ LS ++ ++D R +S Sbjct: 149 VLSKALEDAYREETIPKNPAKLVTPPTKNKFEAGFLSTKQIREMLDKLREDALYMPVYLS 208 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTV---PKTQA-GTNRVIHLIKPAI 239 V G R GE+ L W D+D++N + IR NL D KT+ +NRVI + I Sbjct: 209 VVLGARRGEVLGLQWSDVDMENKLIHIRHNLIMDNGNPVLREKTKTDSSNRVIVVTDRLI 268 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 AL+ + + K + ++ G F + + Sbjct: 269 KALKEHK--------------LKLKQKEMKLQHGQLYHKSDFVCTWPDGKPFNPSHLSRS 314 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 + +++ GL + + + RH+ A + ++++GH+ Q+ +YG Sbjct: 315 FSLRLQKYGLPNIRFHDLRHSNAALMIAQNVPMKGASDRLGHSTIQITNDLYGHTERSVQ 374 Query: 360 NAQVALLNTQL 370 ++ + Sbjct: 375 EEIAIKIDQAI 385 >UniRef50_C7GF85 Phage integrase n=2 Tax=Clostridiales RepID=C7GF85_9FIRM Length = 398 Score = 200 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 71/369 (19%), Positives = 131/369 (35%), Gaps = 32/369 (8%) Query: 18 YAKQFPSSRNL---------EKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK 68 Y K P ++ D+T+ + ++ ++A ++ YR Sbjct: 37 YFKTLPEAKKWLADAKYEDTHNLIVTAPDMTVDKWFNYWIDNIICDLAPNTIRNYRERY- 95 Query: 69 NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAV 128 EKN+ I + +V+ K+ + + T+ ++ + Sbjct: 96 -------EKNIQPLIGTMCIADVKPMHC------KAVLNRMETEYAGSTIRQTYISMGTM 142 Query: 129 FQFGVDNGYLADNPFKGISPLKESRTIPD--PLSREEFIRLIDACRNQQAKNLWCVSVYT 186 F+ V N +A +P G+ K R + D L+ EE + ++A + + + T Sbjct: 143 FKSAVMNDIIAKHPMNGVRYTKPVRAVDDIKYLTVEEQEKFLEAAERSHNYRQYALLLET 202 Query: 187 GVRPGELCALGWEDIDLKNGTMMIRRNL------AKDRFTVPKTQAGTNRVIHLIKPAID 240 G+R EL L W+ ID K T+ + ++L R PKT+ + R I L + A Sbjct: 203 GLRTAELIGLTWDAIDWKKRTLTVNKSLEYRHSRRYWRAGPPKTKK-SYRTIPLTERAYT 261 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 L+S KE + EY + + + ++ G+ S Sbjct: 262 ILKSCYDEKDTRKESEMLSQILEYTDSRTGEKKCLVMRDLVFINWRTGEPAKNSSYDTHL 321 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 AG++ + RHTYA ++ G P + +GHA + Y E+ Sbjct: 322 YKLCDEAGIKRFCMHALRHTYATRAIERGVQPKVLQQLLGHASIKTTMDRYVHVTDESLA 381 Query: 361 AQVALLNTQ 369 V Sbjct: 382 KAVQQFEAA 390 >UniRef50_A3DCS0 Phage integrase n=6 Tax=Bacteria RepID=A3DCS0_CLOTH Length = 506 Score = 200 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 68/361 (18%), Positives = 132/361 (36%), Gaps = 42/361 (11%) Query: 38 LTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELL 96 + + ++L + T V +T+ +Y + I+ +I+ +K L + E K L Sbjct: 173 VLFVDFLLEWLEMMRTRVRETTYASYNSGIRQSIIPYFMDKKL----TLTDIEENPKYLQ 228 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP 156 YQ S G S +V N+ Q G + NP I K+ Sbjct: 229 DFYQHELS------KGLSPNSVLRRHANIRKALQHAFHLGLIKSNPADRIERPKKQDYTA 282 Query: 157 DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWE--DIDLKNGTMMIRRNL 214 + EE +L A + + ++ Y G+R E+ L W+ D + + + I+ + Sbjct: 283 SYYTDEELAKLFKAAKGDPLELPIVLAAYYGLRRSEIIGLRWDAIDFNPDDPKITIQFTV 342 Query: 215 AKDRFTV-----------PKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFRE 263 + F K++A + R + L+KP D L + ++ + + Sbjct: 343 TEVNFGDGQGNVIIEKEGTKSKA-SKRTLPLVKPIADLLLQKKKDIENNRRLCGSCYNDK 401 Query: 264 YGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYAC 323 Y FV V G+ + I Q + +++ GL+ + + RH+ A Sbjct: 402 Y-------LDFV-------HVNEIGERMKPNYISQHFALLLEKHGLKKIRFHDLRHSCAS 447 Query: 324 WSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNEAM 383 G + I +GH+D +Y + N+++A N L + + Sbjct: 448 LLYANGVSLKQIQEWLGHSDISTTANIYTHL---DYNSKIATANAILPVLFDQQESTDEL 504 Query: 384 K 384 + Sbjct: 505 E 505 Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 56/150 (37%), Gaps = 16/150 (10%) Query: 43 LAEKFLALKETEVAKTSLNTYRAVIKNIL-SIIGEKNLASSINKEKLLEVRKELLTGYQI 101 +++L K + + + Y + + NL +L E+R L Y Sbjct: 71 FLDRWLKDKMNDFDEETYAVYSHNARVFIGPYFKSLNL-------QLHEIRTSTLEAY-- 121 Query: 102 PKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSR 161 N+ T+ S T+ + + ++ G++ NP KGI+P + L Sbjct: 122 --YNHEKTKNHASKKTILQIHEIITLSLNYAIELGWIESNPAKGINP---ATDEVSVLFV 176 Query: 162 EEFIRLIDACRNQQAKNLWCVSVYTGVRPG 191 + + ++ R + + + S +G+R Sbjct: 177 DFLLEWLEMMRTRVRETTYA-SYNSGIRQS 205 >UniRef50_UPI0001C37419 Phage integrase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37419 Length = 386 Score = 200 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 73/362 (20%), Positives = 138/362 (38%), Gaps = 41/362 (11%) Query: 22 FPSSRNLEKFGEARQDLTIKELAEKFLALKETE-VAKTSLNTYRAVIK-NILSIIGEKNL 79 F R+ + + + +++ ELAE + E + T++ Y + + +I I+G K L Sbjct: 52 FEFERHCKGYAQLNENMRFYELAEWYFENYAPEELKPTTVLNYESQYRNHIAPILGNKKL 111 Query: 80 ASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLA 139 I L E K L + + ++V + ++++ + G+ Sbjct: 112 -KDITTPMLTEFLKVL------------GKEHHLNPISVRKVYIVVQSIYRRALQQGFAR 158 Query: 140 DNPFKGISPLKESRTIPDP-LSREEFIRLIDACRNQQA----KNLWCVSVYTGVRPGELC 194 DNP + + K+ + LS EE R + R++ K + V ++TG+R GE Sbjct: 159 DNPCQNVIIPKKRDSGKRYSLSEEETKRFLHLIRDKPWDEDVKRILIVLLFTGMRIGECL 218 Query: 195 ALGWEDIDLKNGTMMIRRNLA----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTR 250 L WEDID + T+ I L+ K PKT+ + R+I + L Q Sbjct: 219 GLAWEDIDFEKKTIFIHHTLSCVDGKCYLDSPKTK-SSIRLIAMNSTVEKYLNDQQAYVE 277 Query: 251 LSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLR 310 K + + + PE+ G++ S+ K Sbjct: 278 QLKMALGNKYA---------------HPEM-VFPSGQGNYRDRSSVYHSLKRMTKGTEFE 321 Query: 311 HRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 ++ RH A L +G + I+ +GH D + +Y + + ++ +L Sbjct: 322 DMTLHKLRHCNATLLLNSGVDLKVISEHLGHCDIGVTANIYADVLRKQKIRLADTIDDKL 381 Query: 371 SE 372 S+ Sbjct: 382 SD 383 >UniRef50_UPI0001C37C27 integrase family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37C27 Length = 391 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 130/338 (38%), Gaps = 16/338 (4%) Query: 37 DLTIKELAEKFLA-LKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 +T+ E +L + EV T+ Y + +++ ++I KL ++ + Sbjct: 66 KVTLYEWLCTWLDQYCKIEVKLTTYVNYDTYV--------HRHIKNTIGGYKLCDLNTSI 117 Query: 96 LTGYQIPKSNY--IVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 + + K+ + + G S T+ N ++ V + NP ++ K + Sbjct: 118 MQSFFNEKAENGKLHSSGGLSPKTIKNMHDMMHRALDKAVHLDMIIKNPTDFVTLPKRRK 177 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLK-NGTMMIRR 212 + L+ +E +L +A + + + +++YTG+R GE+ L W+ + ++ +R Sbjct: 178 SEMRFLTIDEQKKLQEALKGDRLEMPVLLALYTGMRQGEIFGLKWKYVHIESTDRAWLRV 237 Query: 213 NLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKC 272 A +RF+ + L +P + L E + + + E+ Sbjct: 238 VQAVNRFSNRTDDGKRKTFLSLSEPKTPHSIRTIPLMPYIAERLTEYKCEQ----EQHFK 293 Query: 273 TFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANP 332 G+ + ++ + +KR GL + RHT+A +L +G N Sbjct: 294 DNGLPMSEMVFTTKNGNLVDPRNFQRDFKLLLKRNGLHEINVHGLRHTFATRALESGMNV 353 Query: 333 AFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 ++ +GH+ Y + +++ LN+ L Sbjct: 354 KTLSKILGHSSVAFTLDTYAHVTEDLKFEEMSALNSFL 391 >UniRef50_Q87MU5 Putative pore-forming cytotoxin integrase n=2 Tax=Vibrio RepID=Q87MU5_VIBPA Length = 370 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 85/367 (23%), Positives = 166/367 (45%), Gaps = 34/367 (9%) Query: 30 KFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLL 89 K + T+K+ + +L ++ A ++L + + KNI +GE + ++++ ++ Sbjct: 2 KTITTTKSPTVKDYIDAYLIERKYCAAPSTLASDLSRAKNINEALGEFPI-NAVSHTQIN 60 Query: 90 EVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPL 149 + ++ T+N ++T L + V +G +A NP G+ Sbjct: 61 MLLVSWHERFR--------------NKTINEHLTILRRISLKAVRDGVIARNPMTGVQNF 106 Query: 150 KESRTIPDPLSREEFIRLIDACRN--QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGT 207 K P+P +++E R+ + C+N Q +N +++ TG+R EL AL W+DI+ + Sbjct: 107 KTVDPEPNPFTKKELARMHE-CKNVCTQGQNAVMLNLLTGLRISELIALSWQDINWEREV 165 Query: 208 MMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRT 267 + +RR + + PKT+ G+ R + L A+ L+ Q+ LT + I++ + Sbjct: 166 LYVRRACVLNIYKCPKTK-GSVREVDLNPLALKLLKEQLKLTGKRRPQTINILECDNKTF 224 Query: 268 EKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLT 327 K +F+F + + FT + + +++AG+ HR Q RHT+A LT Sbjct: 225 TKDSVSFIFLNTKTNQPFTDAKEFT----ERFFIKFLEQAGVAHRGVGQLRHTFASQCLT 280 Query: 328 AGANPAFIANQMGHADAQMVFQVYGKWMSENN----NAQVALLNTQLS-------EFAPT 376 G + ++A QMGH M+ + YG+W+ E++ L P Sbjct: 281 TGISKDWLAVQMGHKSTTMIDKHYGRWIREDSPNYAREAAQHLQDIFGLPQIKPTVTLPA 340 Query: 377 MPHNEAM 383 +PH+ + Sbjct: 341 VPHSSLV 347 >UniRef50_A6NXL1 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NXL1_9BACE Length = 397 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 77/371 (20%), Positives = 139/371 (37%), Gaps = 34/371 (9%) Query: 17 DYAKQFPSSRNL---EKFGEARQDL------TIKELAEKFLALKETEVAKTSLNTYRA-V 66 Y + P ++N +F + +D+ T+ E ++ ++A +L YR Sbjct: 36 KYFQTVPEAKNWIEEARFADQHEDIFVPTETTVDEWFGFWIENIVGDLAPNTLRNYRERY 95 Query: 67 IKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLN 126 NI +IG ++S K + +K LL I + T+ + Sbjct: 96 AHNIQPVIGRMAISSV----KPMHCKKVLLQMDAI-----------YAGSTIRQAYITMG 140 Query: 127 AVFQFGVDNGYLADNPFKGISPLKESRTIPD--PLSREEFIRLIDACRNQQAKNLWCVSV 184 +F+ N +A +P G+ K R + D L+R+E + A + + + + Sbjct: 141 TMFKAAKMNDVIAKHPMDGVRYTKPVRAVDDIKFLTRQEQSLFLQAAKKSHNYYQYALIL 200 Query: 185 YTGVRPGELCALGWEDIDLKNGTMMIRRNLA------KDRFTVPKTQAGTNRVIHLIKPA 238 TG+R GEL L W+ +DL+ T+ + + L R PKTQ + R I L A Sbjct: 201 ETGLRTGELIGLTWDAVDLEKRTLTVNKTLEFRHGLHTWRAGPPKTQ-HSYRTIPLTDRA 259 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 + L+S KE + EY + ++ G+ S Sbjct: 260 CEILQSVWNSRDTRKESPLLSQTLEYIDRRTGSIAKLVMRDLVFINWRTGEPAKNSSYDT 319 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 AG++ + RHTYA ++ +G P + +GHA + Y +++ Sbjct: 320 HLYKICDEAGIKRFCMHALRHTYATRAIESGIQPKVLQKLLGHASIKTTMDWYVHVTTDS 379 Query: 359 NNAQVALLNTQ 369 + V Sbjct: 380 LDQAVRQFEKN 390 >UniRef50_A9VJZ8 Integrase family protein n=15 Tax=Bacillus cereus group RepID=A9VJZ8_BACWK Length = 370 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 120/340 (35%), Gaps = 35/340 (10%) Query: 35 RQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRK 93 L E E + K+ V + + + I+ +G LA Sbjct: 62 PSKLLYGEYLESWFNTKKYSVGIQTAKVLKGYLNSRIIPSLGNIKLAK------------ 109 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 LT + + G T+ + + + +D + N K + Sbjct: 110 --LTSLHMQNYVNSLRDEGLKRGTIEKIIKLIRNSLEHAIDLELITKNVAAKTKLPKADK 167 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 + E + A ++ + ++ +++ TG+R GEL W+D+DL+ G + I + Sbjct: 168 EELTVWNEHEVQFFLKAAQDSRYSIVFHMALVTGMREGELLGFRWKDVDLEKGHLTISQT 227 Query: 214 LAKDRFT---VPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQ 270 L+ D T KT++ ++ L T+ +L K + + + E Q Sbjct: 228 LSHDGKTFLLGGKTKSSLRKI----------LLPASTVAKLKKHRAVVLKEKLSQGEEYQ 277 Query: 271 KCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGA 330 V G ++R+ +A IK+ + + + RHT+A L G Sbjct: 278 DNDLV-------MCTPSGTPINPANVRRSLNALIKKVAVPKIRFHDLRHTHATLLLAKGV 330 Query: 331 NPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 N I+ ++GH++ ++ Y + V + L Sbjct: 331 NVKVISERLGHSNIKITLDTYSHVLPTMQEDAVNKIEEIL 370 >UniRef50_Q8ERR7 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ERR7_OCEIH Length = 378 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 61/340 (17%), Positives = 128/340 (37%), Gaps = 40/340 (11%) Query: 40 IKELAEKFLALKETE-VAKTSLNTYRAVIKNIL---SIIGEKNLASSINKEKLLEVRKEL 95 + + + + +T+ + +IK L + EK ++ +E Sbjct: 67 FQSFLQHWFYTHYITSIKRTTHSNRDYLIKKHLIEDNPFAEKAISDITTEE--------- 117 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 I + G S + L+ F V ++ NP +P + Sbjct: 118 -----IDYFYHYKLGKGYSTSYIRKMHQMLHLSFAQAVKWRKISYNPVVNTTPPRVQTKQ 172 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 S+++ + ++ ++ L+ +++YTG+R GEL L W DI+++ + I RNL Sbjct: 173 VSIWSKDQVKQFLETSNLERLYILFLLAIYTGMRKGELLGLKWSDINMEKECIHIHRNLC 232 Query: 216 KDR-----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQ 270 + FT PKT + RVI + D L+ +E + EK+ Sbjct: 233 YIQNQGYFFTTPKT-VRSTRVIPISSLISDQLQC----------------IKEKQQCEKE 275 Query: 271 KCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGA 330 ++ G ++ ++++ IK A + + + RHT+A ++ G Sbjct: 276 LAGPSYEDNDLVICTALGKVQDPRNVTRVFERCIKNANVPKIRFHDLRHTHASILISEGV 335 Query: 331 NPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + ++++MGH + +Y + +N + L Sbjct: 336 DIVKVSSRMGHTSPKTTLDIYAHVVPNTDNEVATIFEKSL 375 >UniRef50_Q252J3 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q252J3_DESHY Length = 395 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 64/367 (17%), Positives = 130/367 (35%), Gaps = 37/367 (10%) Query: 29 EKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEK 87 E + D+ + +K+L + +AKT+ Y+ ++ I E N+ Sbjct: 56 EGKRNPQADVLFTDYLQKWLTQAKPTIAKTTFKGYQTMLDGRISRYFTELNIT------- 108 Query: 88 LLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS 147 L EV + + + + G + TV +Y L Q V + NP + Sbjct: 109 LGEVTPQHIQDFHQS-----IFDEGHTPNTVIHYHAVLRRALQNAVKKEIIDSNPADRVD 163 Query: 148 PLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGT 207 K++ S EE + L D + + ++ Y G+R E+ L W+ I+L+ T Sbjct: 164 RPKKNVYHAQFYSAEEMMALFDEISDDPLEICVKLAAYYGLRRSEVLGLKWDAINLEQKT 223 Query: 208 MMIRRNLAKDRF---------TVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIID 258 + I+ + +D V KT+ + R + L+ L ++ + ++ Sbjct: 224 ISIKHKVIEDTVDGKSIAVGEDVLKTK-SSFRTLPLLPSVEKLLLAEKEKQEMYRKLFKR 282 Query: 259 VHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSR 318 + R+Y + G + + + + A+++A L+ + + R Sbjct: 283 SYCRDY--------------LDYICLDQAGKLMRPNYVTEHFSWALEKADLKKIRFHDLR 328 Query: 319 HTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMP 378 H+ A L G + I +GH+ +Y +++ P Sbjct: 329 HSCASLLLANGISMKQIQIWLGHSTFSTTADIYSHLDFHAQIESGLVMDGMFERNRVAEP 388 Query: 379 HNEAMKN 385 A N Sbjct: 389 TGLAAAN 395 >UniRef50_Q98MQ9 Bacteriophage integrase n=5 Tax=Rhizobiales RepID=Q98MQ9_RHILO Length = 399 Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 64/341 (18%), Positives = 125/341 (36%), Gaps = 27/341 (7%) Query: 39 TIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTG 98 T+ E ++LA + VA + Y + + LS + + S + +++ LT Sbjct: 66 TVAEFLNEWLAFVKPSVAPKTHERYTEICRKGLSPLIGNVILSKLKTDRIDAAFTTALTA 125 Query: 99 YQIP---KSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 ++ K + P + TV++Y L V L+ NP +P K R Sbjct: 126 PRVDHRTKKDQREPLPPLAPRTVHHYRRVLVKALGQAVTWERLSRNPATATTPPKVERQK 185 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNG--TMMIRRN 213 + L++ R + ++V G+R GE+ AL W ++L + M I + Sbjct: 186 MLAYDVGQTATLLETLRPTRMFVPVLLAVTCGLRRGEILALRWRHLELGDNRRQMSIEES 245 Query: 214 LAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 + R+ PK +G R + L + L++ + + Sbjct: 246 AEQTADGVRYKEPK--SGRARTVALSASTVAELKAHRARQAEEQLRLG---------IRP 294 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG 329 +FV + G S+ W + + L + + RHT+A L+AG Sbjct: 295 DADSFVV-------AQVDGQPLQPRSLTHEWVRVLGKTSLPRIRFHDLRHTHATQMLSAG 347 Query: 330 ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 +P + ++GH++ + +Y M ++ L Sbjct: 348 VHPKIASERLGHSNIGITLDLYSHVMPGMQADAAEQVDVAL 388 >UniRef50_C0GET2 Integrase family protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GET2_9FIRM Length = 386 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 71/341 (20%), Positives = 132/341 (38%), Gaps = 32/341 (9%) Query: 39 TIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTG 98 T E E +LA K+ + ++ +TY + ++ S++ KL +++ + Sbjct: 69 TFTEWFEIWLASKKNNIKPSTYDTYETFWR--------VHIKSALGHMKLDKIQPHHVQK 120 Query: 99 YQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKG--ISPLKESR-TI 155 K S +V T +N + + ++ NP + K ++ Sbjct: 121 LLDEKQGGE-----LSPRSVRYIHTTINTALKSALKQRIISFNPADAELLELPKNTKIKE 175 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 PL++++ I + + + +S+ G+R GE+ L WE+ID + T+ I+ NL Sbjct: 176 VKPLTQDDVKAFIATAKEDKFSVAYILSLALGMRKGEVLGLQWENIDFEQKTLTIKNNLT 235 Query: 216 KDR-----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQ 270 + + T PKT A +NRV+ L + + L + +E I +Y E Sbjct: 236 RVKGKGLVLTTPKT-ASSNRVVLLPEKILTLLSEHGRKQAVERE--IAKASGKYSEAEGF 292 Query: 271 KCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGA 330 VF E G + + +++AGL + RH+Y AG Sbjct: 293 D-NMVFTYEE-------GKPVCPRYFERKFKKVLEKAGLSQAGLHSLRHSYGTLQNEAGV 344 Query: 331 NPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 N I +GH+ A VY + +E ++ L Sbjct: 345 NMKAIQATLGHSKASFTMSVYTQNTTELQREATQAVDKWLP 385 >UniRef50_Q82ZU2 Site-specific recombinase, phage integrase family n=2 Tax=Enterococcus faecalis RepID=Q82ZU2_ENTFA Length = 381 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 68/345 (19%), Positives = 129/345 (37%), Gaps = 43/345 (12%) Query: 38 LTIKELAEKFLALKETEVAKTSLN-TYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 LT K+L EK+LA + + +S+ R K+IL +G+ L I + ++ + Sbjct: 68 LTFKQLYEKWLAQQRLTIKPSSIAVNKRFAEKHILPYLGDCKL-DEITVIQCQDLVNKWF 126 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK--ESRT 154 S Y + ++G + NP + K E T Sbjct: 127 NQGHKQYSFYRKLTA---------------QIMRYGESMELMNTNPMRKTILPKWKEEET 171 Query: 155 IPDPLSREEFIRLIDACR---NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 + +++E D + N + + + +TG R E+ AL W+D+D+ N ++ I Sbjct: 172 KLEYYTKQELNHFFDCLKQYGNFKQLAFFRLLAFTGCRKSEVLALQWKDLDITNKSVYIG 231 Query: 212 RNLAKDRF-----TVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 + +A+D F PKT A + R I L + + T+ R + + G Sbjct: 232 KTVAQDEFYNILTQTPKT-ASSTRSISLDNETLQIMAKWRTIQR--------SDYFQMGF 282 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL 326 + ++F N+ + + + + IK+ L + RHT+A L Sbjct: 283 NTSSEEQYIFTN-------NHNKLLSPNVVNIWLNCLIKKYDLPSITPHHFRHTHASLLL 335 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 +G +A ++GH + ++Y M E + Sbjct: 336 QSGVPIKEVAERLGHTSTAITDRIYSHVMPEEKEKTADKFAQFVG 380 >UniRef50_A7VEW1 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VEW1_9CLOT Length = 379 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 69/349 (19%), Positives = 132/349 (37%), Gaps = 47/349 (13%) Query: 33 EARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVR 92 E D+ + E ++ LK+ V ++ Y + + + E L + + ++ Sbjct: 61 ENATDMLVDAWFEYWIDLKKKTVRPNTVRNYSERYERNIKNVIENKLLTEVKPIHCQKIF 120 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKG-----IS 147 ++ G T+ L + +F +N + NP K I Sbjct: 121 SDMAD-------------EGYKTTTIYQTRIALYNMLEFAKENEVIITNPCKKSVKSDIG 167 Query: 148 PLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGT 207 + + + L+ ++ R + A + Q + + ++ TG+R GEL L WEDI+ + T Sbjct: 168 KPSDKK---EALTIDDQRRFLAAAKGQSYEYQYRFALQTGLRTGELVGLKWEDINFERKT 224 Query: 208 MMIRRN------LAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHF 261 + I R+ + + R PK+++G R I L AI L++Q R K Sbjct: 225 LTIERSMEFRYKVGEWRVGPPKSKSG-YRTIPLTDEAICILKAQKEKNRKIK-------- 275 Query: 262 REYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTY 321 +K+ VF VKN + +AG++ + RHT+ Sbjct: 276 ----VIDKEWADTVFLCRKGQPVKN-------STYDTALFKICDKAGIKRFSMHVLRHTF 324 Query: 322 ACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 A + G P + +GH++ + +Y E ++ L+ L Sbjct: 325 ATRCIEGGMMPKTLQKILGHSNIGITMNLYVHITEEEKQKEIDLVAEAL 373 >UniRef50_D0L542 Integrase family protein n=3 Tax=Bacteria RepID=D0L542_GORB4 Length = 463 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 62/346 (17%), Positives = 113/346 (32%), Gaps = 42/346 (12%) Query: 36 QDLTIKELAEKFLALKET-EVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRK 93 Q LT+ + +L KE + T+L +YR + I+ IG L + + + Sbjct: 61 QRLTLAQYLASWLTAKEQAGIRATTLRSYRQHVDSYIVPTIGNVRL-RDLRATHVEHMLS 119 Query: 94 ELLTGYQIPKSNYIVTQ------PGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS 147 E+ + P + + S T L + ++ N + Sbjct: 120 EIAKPPKKPAKGVAIGKGKRRNPKALSPATQRRVHATLRSALTSAKRKHLVSFNAAADME 179 Query: 148 PLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGT 207 + SR P + +D + + TG+R GE + W D+D + Sbjct: 180 LPRASRPKVKPWEASDLGAFLDHATKDRLGAFFETIAMTGLRRGEALGIRWPDVDFEKAR 239 Query: 208 MMIRRNLAKD-----------------RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTR 250 + + + L + RF KT +G R++ L + L +Q Sbjct: 240 VTVNQQLVEVDGTGIDCPFCGGEHKQFRFGPCKTASGEARIVDLDSGTLGVLMAQRLRQE 299 Query: 251 LSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLR 310 +E D + VF + G + + A AGLR Sbjct: 300 QEREQWGDAY---------NDHQLVF-------AREDGSPIPPADVTAKFHALTDEAGLR 343 Query: 311 HRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 + + RH A L AG A ++ ++GH+ + Y + Sbjct: 344 RIRLHDLRHGQASLMLAAGVPIAVVSKRLGHSSISITSDTYSHLLD 389 >UniRef50_C4V5B3 Prophage LambdaCh01, site-specific recombinase phage integrase family protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V5B3_9FIRM Length = 377 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 115/343 (33%), Gaps = 31/343 (9%) Query: 34 ARQDLTIKELAEKFLA-LKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVR 92 + LT+ +L+ + V ++ Y A++K L +I ++ E Sbjct: 50 TPEKLTLSTYLNTWLSSYAKVNVKASTYAQYEAIVKKRLIPWAGGCDIKAITPMQIDEFY 109 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS-PLKE 151 LL + + G SA +V LN V G L NP ++ K Sbjct: 110 ATLLQQGRAD------GKGGLSAKSVLYIHRVLNEALGHAVQKGLLVKNPLLSVTNIPKA 163 Query: 152 SRTIPDPLSREEFIRLIDAC--RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMM 209 + S EE L++A N + ++ G+R GE L W ID + ++ Sbjct: 164 KKFKASAYSAEEIRSLLEAAAAENSFWQAAIALAAICGLRRGECLGLKWSKIDFDSQSIT 223 Query: 210 IRRNLA----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 I + K F+ PK+ R IH L+ + KE + + + Sbjct: 224 IDEQVIEIHHKIHFSTPKSTESI-RTIHAPAEVFAILKRRKEELDQHKEWLGNAY----- 277 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWS 325 + V + G + + + + R +R + + RH+ A Sbjct: 278 ----DEHDLV-------LCRGNGSPIRPGNFTKAFKDFLARHNMRTIRFHDLRHSCASLM 326 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNT 368 L +G + +GH+ + +Y M + + Sbjct: 327 LQSGVAMKTASEILGHSSIAITADLYTHVMQKTKEEAAGKIGD 369 >UniRef50_B0PGN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PGN1_9FIRM Length = 402 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 135/358 (37%), Gaps = 40/358 (11%) Query: 26 RNLEKFGEAR----QDLTIKELAEKFLALK-ETEVAKTSLNTYRAVIK-NILSIIGEKNL 79 R+LE F + +T+ E ++++ + +L +Y I+ I +G K + Sbjct: 53 RDLEAFQDVELTEDSRMTLGEWLDRWMEDYGAATLRPNTLRSYEQFIRCYIKPYLGNK-I 111 Query: 80 ASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLA 139 S + + + ++ ++L ++ + + S V L+ + +A Sbjct: 112 VSRVTRMDIQKLYRKLKHEGRVREHPEHGHE--LSDTMVLRIHAMLHRCLKDAEAAHVIA 169 Query: 140 DNPFKGISPLKESRTIPDPLSREEFIRLIDAC-RNQQAKNLWCVSVYTGVRPGELCALGW 198 NP G K + L++E+ + A RN+ ++ + + TG+R GE+C L W Sbjct: 170 RNPTDGAVVPKANHRPKQILTKEQMETFLAAVERNEIWRDFFYTELTTGLRRGEICGLMW 229 Query: 199 EDIDLKNGTMMIRRNLAK---DRFTVPKTQAGT-NRVIHLIKPAIDALRSQMTLTRLSKE 254 +D D K GT+ I R++ + +T+ R I L + LR Sbjct: 230 QDFDEKAGTLKILRSVNVPKAGELEIGETKTSQGRRTIRLPPSTVQRLRE---------- 279 Query: 255 HIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKS 314 R + ++F ++ + ++ AGL + Sbjct: 280 -----------RKQHAVSQWIFPEPLAPE-----KPVRPSAAYYWMKRILREAGLPTIRF 323 Query: 315 YQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 + RHT+A +LT+G + ++ +GH +A Y + ++ L + Sbjct: 324 HDLRHTFATHALTSGVDAKTLSGILGHTNASFTLDTYTHVTPDMQQEASHIVGGFLED 381 >UniRef50_C7N6A1 Site-specific recombinase XerD n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6A1_SLAHD Length = 451 Score = 197 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 72/386 (18%), Positives = 138/386 (35%), Gaps = 66/386 (17%) Query: 26 RNLEKFGEARQDLTIKELAEKFLALKETE--VAKTSLNTYRAVIKNILSIIGEKNLASSI 83 ++ E +T+ E E +L ++T V++ ++ Y A +K I IG+K L Sbjct: 62 QHEEGLAIDAGKVTVSEFIETWLEARQTTGKVSEFTIKNYHARLKTIEPYIGKKKL---- 117 Query: 84 NKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPF 143 NK E+ + + + S T+N L +VF+ D + NP Sbjct: 118 NKVTAAEIERAYAQ---------LKAKKSLSDTTLNKLHILLKSVFEKACDYDLILRNPC 168 Query: 144 KGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNL------------------------ 179 + + L++EE L+ ++A+ + Sbjct: 169 NKVESPSVDKPDRKSLTQEEGATLLHKLDLEEARIIQEMDEKEERQVKKGNQFGRSSIRG 228 Query: 180 ---------WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK-DRFTVPKTQAGTN 229 +++ TG+ GE+ L W++++L+ T+ + + L K PKT AG Sbjct: 229 LANLGFTIGTRIALATGLHRGEVFGLTWKNVNLRQNTITVAQTLTKEGEIKDPKTGAG-R 287 Query: 230 RVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGD 289 R I + + LR +R+ R E K G+ Sbjct: 288 RTISIDESTAAHLRM----------------WRKRQREELAKLAIKLGDATPVCCSERGE 331 Query: 290 HFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQ 349 + + + W + AG + ++ RH+ A L G + + ++MGHA+ + Sbjct: 332 WVNLANFERWWRSFRDDAGFEGLRFHELRHSQATLLLANGTDLKTVQDRMGHANGAITLN 391 Query: 350 VYGKWMSENNNAQVALLNTQLSEFAP 375 Y + EN+ L+ + Sbjct: 392 WYAHAIPENDQKAAQLVGNLFGTPSK 417 >UniRef50_C3K9Z5 Putative phage integrase n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K9Z5_PSEFS Length = 410 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 79/359 (22%), Positives = 142/359 (39%), Gaps = 48/359 (13%) Query: 11 IKTGVFD---YAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVI 67 IK G+ D YA+ FPSS N+ A + E A+ +L EV + Y+ + Sbjct: 70 IKLGLLDDDKYAELFPSSSNV-----AGGKINFGEYAQLWLD--SREVVGGTKANYKGAL 122 Query: 68 KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNA 127 + + ++ + LL + +S N ++ L+ Sbjct: 123 N--------RYWMPGLALVRIDLITTTLLR-------RVMAASEWKSPGVKRNAISKLST 167 Query: 128 VFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQ------AKNLWC 181 + + + NP + K S+ DP + EE +I + Sbjct: 168 ILNSAMSEELIPKNPAAILELPKRSKKEIDPFTLEEANLIIAKMYEHDHWPSTIYAAFFE 227 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDA 241 +TG+R E A+ W+++D + T + R +A V +T+ G +R + L A+ A Sbjct: 228 FVFFTGMRLSEALAMRWDEVDEQKKTAHVCRGVALGEV-VERTKTGGDRFVLLNDRALHA 286 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWD 301 L K+ G+ + + ++F P KN + + W Sbjct: 287 LDFAKEYAERRKK----------GKGKVLETPYIFPPS-----KNAAYVRQTSDLHKQWV 331 Query: 302 AAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 +K +R R Y RHTYA + +G NPAFI+ Q+GH+ QM+ Y +W++ +++ Sbjct: 332 PTLKALNIRRRPPYNCRHTYATICIMSGMNPAFISQQLGHS-VQMLLSTYARWINSSSD 389 >UniRef50_A5N1F6 Integrase-related protein n=3 Tax=Clostridia RepID=A5N1F6_CLOK5 Length = 416 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 65/361 (18%), Positives = 136/361 (37%), Gaps = 46/361 (12%) Query: 37 DLTIKELAEKFLA-LKETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKE 94 +T +E +K+L E E+A +L Y+ ++ I+ +G L + + + E Sbjct: 68 KITFEEFIKKWLKDYAEAELAPKTLYRYKELLYTRIIPALGHIKL-NKLQPTHITEFYSN 126 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRT 154 L G S T+ ++ ++++ + G++ +NP + K + Sbjct: 127 LREDGIRNDGKP----GGLSERTILHHHRLISSILATAIQWGFILNNPALRLKAPKVEKK 182 Query: 155 IPDPLSREEFIRLIDACRNQ--QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 + EE ++ N+ + K + +++Y G+R GEL AL W DI+ + T+ I + Sbjct: 183 EARHFNIEETAYVLQLIENEPIKYKTMITLAIYGGMREGELTALTWSDINFDDCTIKINK 242 Query: 213 NLAK--DRFTVPK-TQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 +L R T K T+ T R+I + + L+ ++ + TEK Sbjct: 243 SLQHLPGRDTFIKSTKTETTRLISIPISVMTLLKE----------------YKRWQNTEK 286 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAG------------------LRH 311 K ++ + G +I + + I++ L+ Sbjct: 287 LKLGNLWHDSDALFTATDGKSIFPSTISKWFLKFIRKHNESIINDDKIPPKDKSKYLLKE 346 Query: 312 RKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + RHT A + G + ++ ++GHA +Y + + + L + Sbjct: 347 VNFHGLRHTSATLLINQGVDITTVSKRLGHARTSTTTDIYSHSLQKADVEAADKLENLFN 406 Query: 372 E 372 Sbjct: 407 N 407 >UniRef50_A4J1T6 Phage integrase family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1T6_DESRM Length = 383 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 113/338 (33%), Gaps = 37/338 (10%) Query: 40 IKELAEKFLALK-ETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTG 98 + + ++L + +A T+ +Y +++ + + + L + L Sbjct: 66 LGDYMLRWLEDYGKPNLAPTTYYSYSKIVEKHIIPSIGSIIIEKLQPMHLQRYYSQKLQT 125 Query: 99 YQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDP 158 S TV + L V L NP + K + + Sbjct: 126 --------------LSNRTVQYHHRVLKEALSHAVQWQLLNRNPADAVQAPKNKQKEIEL 171 Query: 159 LSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK-- 216 R+I A ++ + +V+TG+R GEL L W+D+D + +R L + Sbjct: 172 PDLSNIDRMIQASKDHPDHIIIISAVFTGMRRGELLGLRWQDLDFDKNLLYVRNTLQRLP 231 Query: 217 ---DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCT 273 FT PK++ + R I + + L+ R+ E+ K Sbjct: 232 DKGKFFTEPKSKK-SRRQIIIPHFLTNLLKDH----------------RKKQLEERFKLG 274 Query: 274 FVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPA 333 ++Q + G ++ + A + + GL + + RH +A L NP Sbjct: 275 HLYQDHDLVFPRPDGTPADPGTVSHRFKALVDKIGLSGLRFHDLRHFHATLLLAENINPK 334 Query: 334 FIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + ++GH + VY + N L Sbjct: 335 KVQERLGHQTISLTLDVYSHLIPSMQNEIAEKLEEIYG 372 >UniRef50_A5N1D5 Phage integrase-related protein n=2 Tax=Clostridium kluyveri RepID=A5N1D5_CLOK5 Length = 392 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 133/360 (36%), Gaps = 27/360 (7%) Query: 26 RNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINK 85 ++ + + + +KE +++L + + ++ ++ Y +I + +GE + S + Sbjct: 55 KSSNGYNFSGDKILLKEYLKRWLKTEGSSLSPSTQKRYNEFCVHISNHLGEIPI-SKLTG 113 Query: 86 EKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKG 145 ++ E K L + G S T+ L+ V +G + Sbjct: 114 LQIKEFYKNLEQPQVYSNF-----KKGLSRSTILKVHRMLHKALTDAVRDGTIDRTVISN 168 Query: 146 ISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKN 205 I +T F +D + + ++ TG+R E+ L WEDID+ Sbjct: 169 IKYGSVEKTETKVWDNSTFYSFLDKIKEELIYLPVLLAFETGLRQSEITGLKWEDIDINK 228 Query: 206 GTMMIRRNLA----KDRFTVPKTQAGTN-RVIHLIKPAIDALRSQMTLTRLSKEHIIDVH 260 + ++RN K + KT+ ++ RVI+L I+ L+ Q RL+K + Sbjct: 229 KLLTVKRNYGYDALKKSLSDKKTKTKSSLRVINLFDNTIENLKKQKQQQRLNKLLYGKAY 288 Query: 261 FREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHT 320 + G+ I + + +K+ + + + RH+ Sbjct: 289 IE----------------SGYICTTSNGNPINPLYISKRFAQLVKKHNFKKIRFHDLRHS 332 Query: 321 YACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHN 380 +A L +P ++ ++GH+ + Y ++ + N ++S++ N Sbjct: 333 HATMLLKENVHPKIVSQRLGHSSIAITLDTYTHVSTDIEKNALLSANEKISQYIEEKESN 392 >UniRef50_B9KYK7 Putative integrase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYK7_THERP Length = 359 Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 75/336 (22%), Positives = 129/336 (38%), Gaps = 43/336 (12%) Query: 37 DLTIKELAEKFLALKETEVAKTSLNTYRAVIKN-ILSIIGEKNLASSINKEKLLEVRKEL 95 +T++EL E++LA + + YR +++ + ++G L S + ++L L Sbjct: 54 RVTVRELCERWLATERKRWKPKTYYDYRWHLEHHVYPVLGRVQL-SKLTPDRLQRFFDSL 112 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 S + N L+ F G+ G+L NP + P Sbjct: 113 ------------------SGRSANLTFRLLHRCFVVGIRWGFLGQNPCDRVVPPAYQAPP 154 Query: 156 PDPLSREEFIRLIDAC--RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 + + RL C + L +S+ G+R GE+ AL W DIDL+ G + + R+ Sbjct: 155 IELPDADALARLFRYCLESDDPYAGLVGLSLLCGLRRGEITALRWSDIDLQTGQLSVVRS 214 Query: 214 LA----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 + T PKT+AG R I++ + I LR Q L K Sbjct: 215 GQWIAGRWVETEPKTRAG-RRTIYVGEQGIRLLRRQKALVAQLKLQ---------AGPAW 264 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG 329 Q+ VF G + + K +G+ + + RH A +L AG Sbjct: 265 QEHGLVFPG-------PNGQPLSPSRVAAAVQRICKASGVPPLRHHSLRHASASLALLAG 317 Query: 330 ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVAL 365 ++ Q+GHA+ + +VY +S+ A+ Sbjct: 318 VPLPEVSRQLGHANVSITARVYSHCISDGRRVTEAI 353 >UniRef50_A6FXR9 Phage integrase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXR9_9DELT Length = 421 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 78/357 (21%), Positives = 137/357 (38%), Gaps = 38/357 (10%) Query: 30 KFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNL----ASSIN 84 + + + T+ E A +F+A + T T L + R+ +K ++L + G+ L A +I+ Sbjct: 58 RKAKPQAVPTLAEFAPEFMAYQATLNKATELASKRSSLKNHLLPVFGDLRLDQIDARAID 117 Query: 85 KEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFK 144 + K+ ++ E + G T+NN++ L+ + G L P Sbjct: 118 RYKMRKLSPEHAATVASTRRRAG---EGLKPKTINNHLMVLSRALRVAQKWGVLDRVP-- 172 Query: 145 GISPLKESRTIPDPLSREEFIRLIDACRNQ--QAKNLWCVSVYTGVRPGELCALGWEDID 202 I L+ ++ D L EE R + A R V+ TG+R GEL AL W+ + Sbjct: 173 EIELLRVTKQPFDFLDFEEAERYLAAAREHYPDWHVFVLVAARTGLRVGELLALQWKHVR 232 Query: 203 LKNGTMMIRRNLAK-DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHF 261 L T+ + + + + PK +G R + L AL +VH Sbjct: 233 LAGRTLRVELSYTRAGGVSSPK--SGKAREVPLTWDVARAL---------------EVHR 275 Query: 262 REYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTY 321 G + + VF G+ ++ S+ K A LRH + RHT+ Sbjct: 276 EVLGAKARARDALVFPNA-------DGERGSLRSVGHFVSRIAKAAKLRHVHPHMLRHTF 328 Query: 322 ACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMP 378 A ++ G + +GHA +M + Y + + + A T P Sbjct: 329 ASHAVMRGVPMRVVQEWLGHASIEMTMR-YAHLAEGIGLDLIDRIAPERDLEADTDP 384 >UniRef50_UPI0001C375B8 hypothetical protein RflaF_20511 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C375B8 Length = 465 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 63/349 (18%), Positives = 126/349 (36%), Gaps = 15/349 (4%) Query: 33 EARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVR 92 E + + + ++L + VA+T+ YR V K + I E L +V Sbjct: 85 ETASTMLLDDFFTEWLTYIKPNVARTTHLCYRKVSKRYMEYINENY-----PNLTLGQVN 139 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 + Y K G T Y L++ F + V + +P + + Sbjct: 140 HNHIQNYLNYK-----LDSGCKGSTAKQYYLALHSAFAYAVKMELIPKHPMDKLVVPRAE 194 Query: 153 RTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 R + +E L + + + + + ++ Y G+R E+ L W+ ID KN T+ I+R Sbjct: 195 RHEATFYNADELNELFEVFKGDKLELVVNIAAYYGLRRCEILGLRWDAIDFKNKTITIQR 254 Query: 213 NLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKC 272 + D G ++ + ++ R + L +E +++ E + Sbjct: 255 KIVSDYD-----DNGEIKIFVETRLKTNSTRRTLPLIPHIEEMLLEKKKMEVKFKKACGK 309 Query: 273 TFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANP 332 ++ + + NYG+ + + Q + I R GL+H + + RH+ A L Sbjct: 310 SYNKEFDGFICRDNYGNMISPGYVTQHFHYIITRNGLKHLRFHDLRHSCASLLLAHDVPM 369 Query: 333 AFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNE 381 I +GH++ + +Y + L + E Sbjct: 370 KAIQEWLGHSNFSITANLYSHLEYNAKVNSAETIARVLGGKSEDKSEAE 418 >UniRef50_C1XF66 Site-specific recombinase XerD n=4 Tax=Meiothermus RepID=C1XF66_MEIRU Length = 374 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 64/340 (18%), Positives = 117/340 (34%), Gaps = 39/340 (11%) Query: 34 ARQDLTIKELAEKFLALKET--EVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEV 91 L + E E++ + + +++ YR + L + L + Sbjct: 63 QPTRLRLGEWLERWADERARSKGLRPSTVQNYRNY----------QQLLKPLAATPLTRL 112 Query: 92 RKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE 151 + + S T + L A + V G L NP + P Sbjct: 113 SPLAIRARFAELAE-------LSPSTRRHLYQFLRAALRDAVRVGLLEANPMDAVDPPTG 165 Query: 152 SRTIP-DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 P +RE+ + A + + ++ V + TG+R GE AL W+D + + I Sbjct: 166 GTVRPPRAWNREQVSAFLAAAQGHRLYPMFYVMLTTGLRIGEAMALRWQDWQGEK--LWI 223 Query: 211 RRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQ 270 R L K R P G++ I+L L T + Sbjct: 224 RHTLTKQRTLGPTKTLGSSAPIYLDLATQTILSEHRTRQAEERATA----------KRWL 273 Query: 271 KCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGA 330 +F EV G + ++ + + A ++A + + RHTY +L AG Sbjct: 274 DHDLIFPSEV-------GTPLSYRNVMRTFQALTEQAKVPRIGLHGLRHTYTSMALQAGL 326 Query: 331 NPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 +P +A+++ H D + ++Y E+ L+T L Sbjct: 327 SPKQVADRLRHKDPALTLRIYQHLQEEDRRQAALNLDTLL 366 >UniRef50_A1WV14 Phage integrase family protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WV14_HALHL Length = 384 Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 84/372 (22%), Positives = 146/372 (39%), Gaps = 46/372 (12%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKF-------GEARQDLTIKELAEKFLALKETEVAKTSLN 61 I+ G FDYA FP+SR L + G D A ++ L + ++ Sbjct: 48 AEIEMGTFDYAAWFPNSRKLAEAQRWLREQGSRAPDQRFGPYAWQWYQLHLGDWKESYAR 107 Query: 62 TYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 V++ ++ GE L I + + R ELL + + S +N Sbjct: 108 RVCGVLEGYLIPHFGEWPL-DQITERAVRAFRHELL------ELTNARGERRLSNARINF 160 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 +T L V +F ++ ++P + I PL++ R P PL+ E+ + A + + Sbjct: 161 ILTPLAGVMRFA-ESELGIEHPMRQIRPLRDDRDDPMPLTAEQVHAFLAAV-DPDYYLYF 218 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAID 240 + YTG+R E+ L +DL+ + +R R T K + T R I L Sbjct: 219 KLRFYTGLRSCEVDGLKVCYVDLERRQLRVREARVDGRQTTLKHRK-TRRDIPLSPGLAA 277 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI-RQM 299 L + +Q +VF ++ G + Q+ Sbjct: 278 ELDRHIR--------------------GRQGDDYVF-------TRSDGRPLHPSWVAEQV 310 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 W +K GL R+ YQ+RHT A L AG NP F++ +GH+ +M+F+ Y +++ Sbjct: 311 WKPTLKALGLAPRRVYQTRHTAAVLHLAAGENPLFVSRLLGHSSTKMLFERYAPFVANAL 370 Query: 360 NAQVALLNTQLS 371 + ++ Sbjct: 371 GDDGSAFEAMMA 382 >UniRef50_A1SI41 Phage integrase family protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SI41_NOCSJ Length = 403 Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 125/358 (34%), Gaps = 48/358 (13%) Query: 34 ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 A QD+T+ E ++++ E + ++ TYR I+ L + +L + Sbjct: 62 APQDITVAEWLDRWMDGHEVTLKPSTAKTYRDKIRLYLK--------PKLGSARLQSLSP 113 Query: 94 ELLTG-YQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 LT ++ +++ + S TV L+A Q V + NP G K Sbjct: 114 SGLTVVWRDLQASGGRSGAPLSRRTVEFARAVLHAAMQDAVVERIIQVNPVDGSKMAKRD 173 Query: 153 -RTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWED-----IDLKNG 206 + + + + A + + +W V TG+R GE+ L W D +DL G Sbjct: 174 GKPKHTTWTAAQVASFLTATTSDRWHPMWAVFASTGMRRGEVAGLRWSDSHGPIVDLDGG 233 Query: 207 TMMIRRNLAK--DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY 264 T+ + + + +R + R I + + LR+ + + Sbjct: 234 TIRVEVSTTQLDNRRVTTTPKNHERRTIAIDPDLVTVLRTWKATQAAER--------LAF 285 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAG---------------- 308 G VF E G D I + + A + Sbjct: 286 GPGYADAEGIVFTWE-------DGRPVMPDYISKTFLTAQTKLKELAAGPGDDAPATIVP 338 Query: 309 LRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALL 366 L + RHT+A L +G +A ++GH D + Y + +++++ V + Sbjct: 339 LPRLVLHGLRHTHATILLRSGVPVHVVARRLGHKDPSVTLDTYADVIPDDDSSAVDVF 396 >UniRef50_C0EDT0 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDT0_9CLOT Length = 462 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 101/269 (37%), Gaps = 22/269 (8%) Query: 110 QPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLID 169 G +A T+N++ L+++ V + NP + P K R L ++ +LI Sbjct: 202 DRGLAAKTINSHHRLLSSMLNTAVQWQIIFSNPCDRVKPPKLERKEARYLDEKQTAQLIT 261 Query: 170 ACRNQ--QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL----AKDRFTVPK 223 + + Q + + + +YTG+R GELC L W D D+++ + I+R + F Sbjct: 262 CLQREPEQYQTMVLLLIYTGMRRGELCGLEWPDFDMEHKLLYIQRESLYLPDRGIFEDTT 321 Query: 224 TQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSAR 283 + RVI L A+ L + E+ K + Sbjct: 322 KTYSSTRVIKLSDEAVKLLIQH----------------KFAQNAERAKLGDAWVDTGKIF 365 Query: 284 VKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHAD 343 G D++ + +++ L + RHT A + G N +A ++GHAD Sbjct: 366 TTCTGKPIHPDTLTTWFHKFVQKNDLPPVSVHSLRHTNATLLIANGVNLTTVAGRLGHAD 425 Query: 344 AQMVFQVYGKWMSENNNAQVALLNTQLSE 372 +VY + + + L+ Sbjct: 426 TGTTTKVYAHAIKTADEMAAETIQNILNP 454 >UniRef50_A1TPL3 Phage integrase family protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TPL3_ACIAC Length = 403 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 96/381 (25%), Positives = 159/381 (41%), Gaps = 38/381 (9%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEA--RQDLTIKELAEKFLALKETEVAKTS 59 LR+++ I G F +A+ FP +NL A + ++ A+ + L + +S Sbjct: 46 RLRATIVEEINQGKFRFAEHFPDYKNLTAVQPATDEESRLFRDWAKVWGRLSARGLEHSS 105 Query: 60 LNTY-RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 Y R + L + G I +LE +L K+ T+ + T Sbjct: 106 HAVYLRHLAAYWLPVFGHLP-PERITHVMVLERLADLSAPRLDEKTG--KTRRALARKTQ 162 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQ---Q 175 NN + L VF+ +P GI K + +PDP S +E ++ A Q Sbjct: 163 NNILIPLRGVFELICKARTEVVDPTDGIDNQKVQKAMPDPFSPDEVEVILRALEEQAGST 222 Query: 176 AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLI 235 + + S + G R E AL WED+D ++ T ++ R + +T+ R + L Sbjct: 223 WADYFEFSFFAGFRASEQIALLWEDVDHRSRTALVWRTRVLTK-DKDRTKTNVERQVELN 281 Query: 236 KPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVD- 294 A +A+R Q T + VF N G F + Sbjct: 282 DRAYNAIRRQRARTEAAGRE-------------------VFWNP------NTGKPFIDEQ 316 Query: 295 SIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKW 354 S R++W AA+++AG+R+R + R T +L AGANP ++A Q GH+ Q++ + Y KW Sbjct: 317 SQRRVWRAALRKAGVRYRAPKECRDTSVTLALMAGANPMWVALQHGHS-VQVMMRDYAKW 375 Query: 355 MSENNN-AQVALLNTQLSEFA 374 + + A A +N +S A Sbjct: 376 IPSADRGANRAAVNAAISGPA 396 >UniRef50_A8LF05 Integrase family protein n=1 Tax=Frankia sp. EAN1pec RepID=A8LF05_FRASN Length = 416 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 129/359 (35%), Gaps = 40/359 (11%) Query: 24 SSRNLEKFGEARQDLTIKELAEKFLALKE--TEVAKTSLNTYRAVIKNILSIIGEKNLAS 81 + + + +L +E A+++ + YR ++ N ++ Sbjct: 76 RQSKADGLTTLDRRSRFADFLTYWLDEIVDPSERAESTKSNYRVMVNN--------HIRP 127 Query: 82 SINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADN 141 ++ +L+E++ E L + K+ G S T+ + L V ++ N Sbjct: 128 ALGSRRLVELKHEDLQRFLNRKA-----ADGYSTSTMRTLRSVLRQALNEAVITEKISRN 182 Query: 142 PFKGISPLKESRTIPDP--LSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWE 199 + + K + + LSR++ +RL+ ++ + L+ + G+R GE AL W Sbjct: 183 VAETLRVPKARKPKRNVAALSRDDGLRLLAEAKSTRHYALYVLLAMVGLRRGEALALRWS 242 Query: 200 DIDLKNGTMMIRRNLAKD------RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSK 253 D D GT+ + R + + K+QAGT R + L + L++ T Sbjct: 243 DFDESAGTLRVVRQVTRVSGVKGLVVGPTKSQAGT-RTLTLPTRCVRVLQAHRTAQHA-- 299 Query: 254 EHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRK 313 R+ ++ +F V G H + +RAGL H Sbjct: 300 -------HRQAAGKRWKENGLIFPSTV-------GTHMEPRGLNTHLSKLCQRAGLPHLG 345 Query: 314 SYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 + RHT A + G + I +GH +Y + + + L+ E Sbjct: 346 PHALRHTAATMAYALGVDWKQIQQMLGHTMLSTTMDIYVDLVDSVHRDAASKLDAWFDE 404 >UniRef50_C2E2T4 Bacteriophage integrase n=5 Tax=Lactobacillus RepID=C2E2T4_LACJO Length = 386 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 79/342 (23%), Positives = 128/342 (37%), Gaps = 46/342 (13%) Query: 43 LAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQI 101 + E +LA E V T+L +A K +IL ++GE + EK+ R + Sbjct: 77 IYEMWLANYELTVKPTTLLNTKACFKNHILPVLGELYV------EKISTFRCQKALNKWF 130 Query: 102 PKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDP--- 158 + + V + V+N + NP K + K + + Sbjct: 131 SDL----------PKMYRKVYSLSSKVLDYAVNNDLIVKNPMKRVIKPKMQKDKREFTNF 180 Query: 159 LSREEFIRLIDACR---NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 S+EE + +DAC+ N + + + YTG+R GE AL W DID +N T+ I + L+ Sbjct: 181 YSKEELNKYLDACKQKKNPRVYLFFRLLAYTGMRKGEALALKWSDIDFENETIRINKTLS 240 Query: 216 KD-----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQ 270 PKT+A +NR I + + I L+ +R+ R E Sbjct: 241 LGTHNSLVIGTPKTKA-SNRTIQVDEQTIYYLQE----------------WRKRQRKELF 283 Query: 271 KCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAI-KRAGLRHRKSYQSRHTYACWSLTAG 329 K F + N + + Q W+ I K A L+H + RHT+A AG Sbjct: 284 KVGFNALTDDQLLFSNGNNQLIRPWLVQYWNKTIAKDARLKHITVHGFRHTHASLLFEAG 343 Query: 330 ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + ++GH+D VY + Sbjct: 344 TPMQDVKERLGHSDITTTMNVYTHVTKSEKKKTAEKFARFME 385 >UniRef50_A1HTM7 Phage integrase family protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTM7_9FIRM Length = 393 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 76/380 (20%), Positives = 138/380 (36%), Gaps = 40/380 (10%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLNT 62 R V K + + +A + +T+ + K+L + VA ++ + Sbjct: 37 RKVVYARTKAEAKQKRDALAAQYEAAYYVDADK-ITVGDWLAKWLDVYARPAVAPSTYDW 95 Query: 63 YRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 Y + + +++ IG L S + + + ++ L+ G+SA TV Sbjct: 96 YERICRVHLIPAIGHLRL-SRLQQMAVQQLLNSLVDA-------------GKSARTVQAV 141 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRN-QQAKNLW 180 + L + +G L P ++ + + PL+ +E+ L+ A + Sbjct: 142 HSVLAMALRVARKHGLLRTLPTDDVAVPQVRKQDKRPLTPDEWDALLTAAQTAPDIFAAL 201 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHLIK 236 V TG+R GEL L W+DID + +RR + R PKT+A T RV+ + K Sbjct: 202 VVEWATGLRRGELLGLMWDDIDFDRCLINVRRAVQIRRGGCVLADPKTEA-TKRVLPVPK 260 Query: 237 PAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI 296 + LR+ + R Q C VF G + + Sbjct: 261 EVMQVLRAHRARQ---------MQCRLAAGPAWQDCGLVFPTSG-------GTLYDPRNW 304 Query: 297 RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 + + K AGL + RH + AGA ++GHA +M+ VY ++ Sbjct: 305 SKRFARIAKAAGL-DIGVHHLRHDLTSRIVAAGAPVKEAQYRLGHATVKMLLDVYAHRVT 363 Query: 357 ENNNAQVALLNTQLSEFAPT 376 +A + + Sbjct: 364 GGQDAITETIRASAPQTLKN 383 >UniRef50_UPI0001C35B62 integrase family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35B62 Length = 406 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 71/377 (18%), Positives = 130/377 (34%), Gaps = 34/377 (9%) Query: 17 DYAKQFPSSRNLEKFGEARQ---------DLTIKELAEKFLALKETEVAKTSLNTYRAVI 67 Y + P ++N + D+T+ + ++ ++A + Y+ Sbjct: 36 RYFETLPEAKNWLADARYEERHNLIVTSPDMTVDKWFTYWIENIVCDLAPNTKRNYQERY 95 Query: 68 K-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLN 126 K NI +IG +A + V + T Y + T+ + Sbjct: 96 KWNIQPVIGAMCIAD-VKPMHCKAVLNRMETTY--------------AGSTIRQAYITMG 140 Query: 127 AVFQFGVDNGYLADNPFKGISPLKESRTIPD--PLSREEFIRLIDACRNQQAKNLWCVSV 184 + + V N +A +P G+ K R + D L+ EE + ++A + + + Sbjct: 141 TMLKSAVMNDIIAKHPMNGVRYTKPVRAVDDIKYLTVEEQEKFLEAAARSHNYRQYALLL 200 Query: 185 YTGVRPGELCALGWEDIDLKNGTMMIRRNL------AKDRFTVPKTQAGTNRVIHLIKPA 238 TG+R E+ L W+ ID KN T+ + ++L R PKTQ + R I L A Sbjct: 201 ETGLRTAEMIGLTWDAIDWKNRTLTVNKSLEYRHSQGYWRAGPPKTQK-SYRTIPLTDKA 259 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 L+S K EY + + + ++ G+ S Sbjct: 260 YSILKSCYDEKDSRKSSETLSQVLEYIDSRTGENKCLIMRDLVFVNWRTGEPAKNSSYDT 319 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 AG++ + RHTYA ++ G P + +GHA + Y E+ Sbjct: 320 HLYKLCDEAGIKRFCMHALRHTYATRAIERGVQPKVLQQLLGHASIKTTMDRYVHVTDES 379 Query: 359 NNAQVALLNTQLSEFAP 375 + + Sbjct: 380 LVNAIRQFQQATPPVSK 396 >UniRef50_UPI000169495E prophage LambdaBa04, site-specific recombinase, phage integrase family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169495E Length = 379 Score = 193 bits (491), Expect = 9e-48, Method: Composition-based stats. Identities = 65/344 (18%), Positives = 125/344 (36%), Gaps = 49/344 (14%) Query: 37 DLTIKELAEKFLALK-ETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 LT+ E F+ + EVA + +KN ++ +I +L ++ Sbjct: 74 KLTVGEFLLDFVENTLKYEVAPNTYEQRMTFVKN--------HIQPNIGSLRLTDLTPNH 125 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR-- 153 + + Y + A V N L+ F V ++ NP + SR Sbjct: 126 VQKF------YNSLREHYGAGYVQNIGNLLSKAFTQAVKWNMISRNPIPLVKKPSLSRKN 179 Query: 154 TIPDPLSREEFIRLIDACRN--QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 T + E+ + +D ++ + ++ +++ +G+R GEL L W+D+D K G + I+ Sbjct: 180 TKMKTWTVEDQRKFLDYAKDGPKLYYVIFLLALTSGMRKGELLGLIWDDVDTKKGIVSIK 239 Query: 212 RNLAKDRFTV-----PKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 R + + + PKT++ R I L +P I ++ Sbjct: 240 RTIVYAQRKLYLKDMPKTESAI-RTIQLPEPTIKVMKQWKLECPA--------------- 283 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL 326 + +F + + +S+ + IK AG+ + RHT+A L Sbjct: 284 ---NELNLLFPSPKTKGI------LYPNSLDKQLAKTIKGAGVPEITMHGLRHTFATTLL 334 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + NP + +GHA + Y + + L L Sbjct: 335 GSNVNPKIVQEMLGHATIKTTMDTYSHVLPNMQKDAASQLGAVL 378 >UniRef50_Q65EQ4 Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core n=15 Tax=Bacillus RepID=Q65EQ4_BACLD Length = 364 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 66/341 (19%), Positives = 130/341 (38%), Gaps = 44/341 (12%) Query: 32 GEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLE 90 GE + T + +A+++L + +S ++I +++ G K + ++I ++ Sbjct: 55 GENEDNPTFEFVAKEYLKWYKKRRKASSYLKTSSIINTHLIPRFGSKKI-NNIRSRDIMR 113 Query: 91 VRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK 150 + +LL Y + V L+AVF F + Y DNP + + Sbjct: 114 FQNDLLDRYAVAH--------------VKKIHQVLSAVFNFAIKQEYTKDNPARLAGNVD 159 Query: 151 -ESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMM 209 E + + +EF I +Q L+ Y+G+R GEL AL W DID + T+ Sbjct: 160 IEEDKHINYWTLDEFKAFIQHVDDQLYYALFMTLYYSGMRKGELLALTWGDIDFDSNTIN 219 Query: 210 IRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 I + + T PKT + R I + K + L T+ +++ Sbjct: 220 IDKTVYNRIVTKPKT-TSSIRKIMMPKHVMRLLAQLKAKTKTKMTYVV------------ 266 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG 329 + DH + ++ + + +K A ++ + + RH++A + + Sbjct: 267 --------------FGEFHDHISTTTLDRKYAEYVKAAKVKKIRLHDFRHSHASYLINRN 312 Query: 330 ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 P+ +A ++GH D +Y V + Sbjct: 313 TIPSVVAKRLGHKDVGTTLNIYSHLYPSTEKEAVLKMEDDF 353 >UniRef50_C2NSI2 DNA integration/recombination/invertion protein n=2 Tax=Bacillus cereus group RepID=C2NSI2_BACCE Length = 382 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 123/343 (35%), Gaps = 34/343 (9%) Query: 36 QDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 LT ++++ + + +T+ ++ I N++ + ++ E+ Sbjct: 68 SKLTYAAYVDEWMKERTFHLQETTYEIHKTYIANVIK--------PRLGHFQMREIEPIH 119 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRT- 154 + + N + G S TV+ ++A + + +NP GI+ K +T Sbjct: 120 MQKFV----NELAIDIGYSPATVHLIYRIVSASLKKAKVLKLIDENPTIGITLPKLRKTS 175 Query: 155 IPDPLSREEFIRLIDACRN----QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 + + EE I+ +N + +++ TG+R GE+ L W+DID +N + I Sbjct: 176 EINVWTLEEVNHFINEGKNVYRSTRMYICCVIALLTGMRQGEIMGLRWKDIDFENRIIYI 235 Query: 211 RRNLAK-DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 R+ L + + V + R +H I L + R Y + Sbjct: 236 RQTLTQSGKIKVGAKNNASIRNVHFPIKLIGELELHRETVKKE---------RLYHGKDY 286 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG 329 + V G+ + R + ++ GL + + RHT+A + Sbjct: 287 EDNNLVICARK-------GNPLIPKNGRIEFYNLTEKLGLPKIRFHDLRHTHATMLIQQN 339 Query: 330 ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 N I+ ++GH D Q Y + L+ E Sbjct: 340 VNVKLISERLGHTDIQTTLNTYSHVLPNMQREVADKLDVMFGE 382 >UniRef50_A0JQR3 Phage integrase n=3 Tax=Lactobacillus salivarius RepID=A0JQR3_LACS1 Length = 381 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 62/353 (17%), Positives = 132/353 (37%), Gaps = 41/353 (11%) Query: 29 EKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKL 88 ++ ++ + ++ +++LAL + V ++ + + ++ + Sbjct: 59 NQYFKSVKSGKFGDVLDEWLALHKETVKASTWQ--------FIELRANNHVRPYFKDMYV 110 Query: 89 LEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISP 148 ++ + S V N + + G + NP + Sbjct: 111 DKITLRHCQDFVNKTFKKAPVAYVYSLSIVKNT-------LDYALRLGMIESNPMLYVIK 163 Query: 149 LKESRTIPD----PLSREEFIRLIDACRNQ--QAKNLWCVSVYTGVRPGELCALGWEDID 202 K+ +I D +++E + +D ++ + L+ + Y+G+R GE AL W D+D Sbjct: 164 PKKQASISDKHDNYYNKDELKKFLDVAKDTSLKKYTLFRLLAYSGMRIGECLALTWHDLD 223 Query: 203 LKNGTMMIRRNLAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIID 258 KN T+ I + LA+ + PKT+A +NRVI L I L+ R Sbjct: 224 YKNNTIAINKTLARTNNGIKIQTPKTKA-SNRVISLDNETIQVLKMWQLEQRKQ------ 276 Query: 259 VHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSR 318 + G +F ++ + V ++R K+AG+ ++ R Sbjct: 277 --LLKVGINAMDSKQLIFSNGKNSFI-------IVPTVRLAIKQIAKKAGIHSITTHGFR 327 Query: 319 HTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 HT+A +G + + ++GH++ Q +Y M E + ++ Sbjct: 328 HTHATLLFASGLDIKQVQARLGHSNVQTTLNIYTHAMKEKQDKIGDEFAKYIN 380 >UniRef50_A6NRR1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NRR1_9BACE Length = 377 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 129/351 (36%), Gaps = 32/351 (9%) Query: 24 SSRNLEKFGEARQDLTIKELAEKFLA-LKETEVAKTSLNTYRAVIKNILSIIGEKNLASS 82 S + A + LT+ + E ++ + E A+T++ YR +I N +L+ + Sbjct: 54 QSELESRQQVAPRALTLDQWLEYWMEQVVEPNRAETTIYGYRKIIDN--------HLSDA 105 Query: 83 INKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNP 142 + + ++ L Y ++ G S TV + L+A V + +P Sbjct: 106 LGDIPVQKLTPRHLQEYYA----MLMRDKGLSPNTVRRHHDLLSAALHTAVRQDIILRSP 161 Query: 143 FKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDID 202 + + P + EE +L + + ++ G+R E+C L W +D Sbjct: 162 TERVEPPRVVPREVGYYGPEELKKLYALAEGTGLELVVKLAGMLGLRREEICGLQWSSVD 221 Query: 203 LKNGTMMIR--RNLAKDRFTVPKTQA-GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDV 259 + I R A +T+ + RV+H+ + LR + ++ + D Sbjct: 222 FAQRRIHICAARTAAGGEIIQKETKNRSSTRVLHMSDELVRLLRRERAGQAENRLALGDK 281 Query: 260 HFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRH 319 ++ V + G + +++ + I+R L + RH Sbjct: 282 ----------------WEDSGLVAVDHMGHPLSPNAVSLAFTRFIRRNNLPKITLHGLRH 325 Query: 320 TYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 T+A + GA I +GH+ ++Y + +N+ A + + L Sbjct: 326 TFATVASAQGAPLFDIGKALGHSTPATTGRIYTHLLDQNHEATLDRVAAAL 376 >UniRef50_C0EC03 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EC03_9CLOT Length = 440 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 113/349 (32%), Gaps = 40/349 (11%) Query: 38 LTIKELAEKFLALK----------ETEVAKTSLNTYRAVIKN-ILSIIGEKNLA-SSINK 85 ++ + ++L K + ++ + Y + N I E +A + K Sbjct: 103 ISFVDFLYQWLEYKYKSATGRVMDSKPIELSTYSGYEQQLNNPIAPYFREHPVALCDLTK 162 Query: 86 EKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKG 145 + +L ++ L TV +Y ++ + VD + NP Sbjct: 163 QDILAFYEKELER--------------VKPTTVKHYHALIHGALNYAVDKNLIPSNPADR 208 Query: 146 ISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKN 205 I K D E + L + + + + + ++ + G+R E+ L W D + Sbjct: 209 IIISKPEPFKGDYYLDSEVLNLFEVIKGHKIELVVLLTAFYGLRRSEVIGLKWSAFDFNH 268 Query: 206 GTMMIRRNLA----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHF 261 IR + K K N+ P I L+ ++ + +E + Sbjct: 269 NCFSIRHTVTTCNVKGERVTIKKDKAKNKSSLRTYPLIPFLKERLLEAKKQQEENRKLCG 328 Query: 262 REYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTY 321 R Y + + V G+ + + + + + LRH + + RHT Sbjct: 329 RAYNK----------EYLGYVCVDVIGNLIKPNYVSSTFGKLLAKNNLRHIRFHDLRHTC 378 Query: 322 ACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 A L G + +GH++ +YG A + + Sbjct: 379 ASLLLANGVPMEQVKEWLGHSEISTTVDIYGHLQYATKKQSAAAIEQDI 427 >UniRef50_C1CUZ9 Putative phage integrase n=1 Tax=Deinococcus deserti VCD115 RepID=C1CUZ9_DEIDV Length = 387 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 82/377 (21%), Positives = 137/377 (36%), Gaps = 52/377 (13%) Query: 14 GVFDYAKQFPSSRNLEKFGE---ARQDLTIKELAEKFLALKETEVAKTSLNTYRAV-IKN 69 G + F LE G+ A +T+ L E++L K EV+ + + YR V +++ Sbjct: 44 GTEKELRAFMQKVKLEAKGQGVSADPGMTVNTLIEEWLDGKAQEVSARTASIYRGVFLRH 103 Query: 70 ILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVF 129 I IG + +++ +L +L + + T L Sbjct: 104 IRPRIGGTKV-RALDAARLKGFYTDLRRDTDLER-------------TRVQIHLVLRQAL 149 Query: 130 QFGVDNGYLADNPFKGISPLKESRTIPDP---------LSREEFIRLIDACRNQQAKNLW 180 V G + NP K + P + + EE +L ++ W Sbjct: 150 DHAVLTGVILSNPAKVVRPATAKAVRREALADAGDVPAWTHEEASKLFAVAMEDRSPFGW 209 Query: 181 CVSV--YTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHL 234 V++ TG+R GEL L W +DL T+ + NL ++ PKT+ + RV+ L Sbjct: 210 AVALGLQTGLRRGELLGLKWSAVDLAGKTLKVVGNLTENDGHRAVGNPKTRE-SRRVVPL 268 Query: 235 IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVD 294 + A+ L++ L E R FVF G Sbjct: 269 SEEAVRVLKAVREWRDL-----------ESTRPGWGGTDFVFP-------TVDGKMQHPS 310 Query: 295 SIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKW 354 +I + A +AG+R+ + +RHT+ G + I+ +GH + VY Sbjct: 311 NINRKVKALTTKAGVRYLSMHATRHTFVTLLAATGVSLQHISKLIGHKTPLVTMTVYSHV 370 Query: 355 MSENNNAQVALLNTQLS 371 E A V L +LS Sbjct: 371 FKEEVAAPVLNLTGKLS 387 >UniRef50_C2VI23 Site-specific recombinase, phage integrase n=3 Tax=Bacillus cereus group RepID=C2VI23_BACCE Length = 392 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 72/338 (21%), Positives = 131/338 (38%), Gaps = 33/338 (9%) Query: 36 QDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 +LTI E + + + E +S + IK + + K KL E+ K Sbjct: 74 SNLTISEWLDIWYETHKNEWKISSCSQRENAIKY--------QMKPLLGKYKLAELDKS- 124 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 Y+ N ++ + TV + VD+ + N F I+ E +T+ Sbjct: 125 --TYKRVYINELLKK--YKPSTVQLFHRLFKIAINAAVDDELIPRNRFNKITIPNEEKTV 180 Query: 156 PDPLSREEFIRLIDACRNQQ---AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 + + EE I A + + ++ + +TG+R GE L W++I+ + T+ + R Sbjct: 181 ENFFTAEELNEFIAAAKKHENITNYSIILLLAFTGLRKGEALGLQWKNINFEEKTLTVER 240 Query: 213 NLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKC 272 PKT+ + R I + I+ L++ T + +K Q Sbjct: 241 TRDNKGTRTPKTKN-SFRTILIDDTLINQLKAYRTWCKKTKLSFGLHL---------QDD 290 Query: 273 TFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANP 332 F+F S G T + + + +K L+ + RHT+A ++ Sbjct: 291 DFIFISYQS------GTPITDNPLMYSFQRILKHTTLKKITPHGLRHTHATLLISQRIPV 344 Query: 333 AFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 IA+++G+ QM+F +YG E VA +T L Sbjct: 345 KVIADRLGNT-PQMIFDIYGHSFKELEEESVAAFSTSL 381 >UniRef50_C9N6T9 Integrase family protein n=7 Tax=Streptomyces RepID=C9N6T9_9ACTO Length = 382 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 58/341 (17%), Positives = 115/341 (33%), Gaps = 35/341 (10%) Query: 40 IKELAEKFLALKETEVAK-TSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLT 97 + E +L K ++L+ Y A ++ ++ ++G K L + + +VR+ + Sbjct: 72 LSEWLPYWLEHYVQSRRKLSTLDKYEAHVRLYLIPMLGTKRLET----LSVADVRRFIAR 127 Query: 98 GYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPD 157 + L V + N + P + + Sbjct: 128 VQAAQTAATA-----------KEAHRVLRTALTAAVREELITRNVASLVEPPRVKQREIS 176 Query: 158 PLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD 217 P S +E + ++A R + +++ G+R GEL L W D+DL N + +R + Sbjct: 177 PWSLKETLSFLEAARRDPLYAAFMLAICMGLRRGELVGLRWTDVDLDNRVLHVRHQTQRR 236 Query: 218 RFTV--PKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFV 275 R T+ ++ RV+ + + LR R R Sbjct: 237 RGTLYDDDPKSRRRRVVPMPALCVAPLRWH----------------RLKQRETFADTGVT 280 Query: 276 FQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFI 335 + G ++ + + AGLR + + +RH A AG P I Sbjct: 281 WSESGYIFATRNGRPVEPRNVYRSFTRVAAGAGLRVVRLHDARHGCATLLTAAGVAPRVI 340 Query: 336 ANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPT 376 +GH+ + VY + + ++ ++ L P Sbjct: 341 MEILGHSQISITMDVYTHVVHDTQREAISHMDRLLKRRLPG 381 >UniRef50_C9AMW3 Phage integrase n=8 Tax=Enterococcus faecium RepID=C9AMW3_ENTFC Length = 378 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 61/344 (17%), Positives = 125/344 (36%), Gaps = 43/344 (12%) Query: 37 DLTIKELAEKFLALK-ETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 D +K+ + ++ + + + YR IKN ++ + K+KL ++ L Sbjct: 61 DTRVKQYLDFWMKEYVKLNLKYNTYENYRFTIKN--------HINGYLGKKKLTDLSPAL 112 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGV-DNGYLADNPFKGISPLKES-- 152 L + + + G S T+ + L V G + NP + K Sbjct: 113 LQNFINAEF-----KKGYSKKTMTITHSVLKNALNMAVYPWGLIKQNPMLYVKIPKYEER 167 Query: 153 ---RTIPDPLSREEFIRLID-ACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTM 208 + +S E+F +++ + YTG+R GE+C L W+++D NGT+ Sbjct: 168 PTTKKDLKIISLEDFDHMLEITPEGHPFYIPLNIGFYTGMRVGEVCGLTWDNVDFSNGTI 227 Query: 209 MIRRNLAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY 264 + + + K+ + PKT + +NR I + + + L+ ++ ++ Sbjct: 228 TVEKQMVKNDGAWVYGTPKT-SSSNRTIFIGQTLLAILKKHKKQQLENRMKYGKLYIDSN 286 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACW 324 K+ V V + + ++ + RHT+A Sbjct: 287 AVCTKEDGGLVTPSVVKWNTRRISNALSLS-----------------FNFHSLRHTHATL 329 Query: 325 SLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNT 368 L GA I+ ++GH+ + Y + N V ++ Sbjct: 330 LLENGAKMKEISERLGHSRISITMDTYSHVTDKMRNQTVDIMEN 373 >UniRef50_A1UH53 Phage integrase family protein n=3 Tax=root RepID=A1UH53_MYCSK Length = 379 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 68/339 (20%), Positives = 129/339 (38%), Gaps = 35/339 (10%) Query: 39 TIKELAEKFLA--LKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 T+ +++ A L ++ +T+ + Y + + L + I ++L ++ + Sbjct: 69 TVSSWLKQWRASSLAASDRKETTKSLYATLSRKHLE-------GARIGDKRLDRLKPSDV 121 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP 156 + + S TV T L V +G LA NP + +R Sbjct: 122 ELLIVQ-----LRGKNLSDSTVRQVYTVLRQALDVAVRDGLLAANPASKVKRPGVARKEA 176 Query: 157 DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK 216 L + RL+DA + + + TG+R GE+ L W D+DL+ G + +R L++ Sbjct: 177 KYLPAADVARLLDAAKGLRYYLGVVLMATTGLRRGEVAGLLWSDVDLEKGELTVRHTLSR 236 Query: 217 D----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKC 272 T PKT + R + L + L+ T +L + +R+ G Sbjct: 237 VDGKLVLTEPKTDR-SRRRVPLHAGVVAQLKMHRT-QQLQERLAAGDQWRDTG------- 287 Query: 273 TFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANP 332 + +G ++ + + A + G+ ++ RH+ A L +G + Sbjct: 288 --------AVLATEFGTLLDPRNLLRTVEIAAAKVGIEDVGAHTMRHSAAVAWLESGVHI 339 Query: 333 AFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 A+ +GH+ + +YG E A V L T L Sbjct: 340 KAAADLLGHSSIAITGDLYGHTSDETARAAVDGLGTALG 378 >UniRef50_A4XLL4 Phage integrase family protein n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XLL4_CALS8 Length = 360 Score = 191 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 121/340 (35%), Gaps = 41/340 (12%) Query: 38 LTIKELAEKFLALKETE-VAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 + + E +++L VA + Y+ +K++ L +N +L + +L Sbjct: 56 IPLNEFLDRWLEEYAKNYVAPKTYIKYKDSLKHVRKAFPSHTL-QQLNTFELQKFFNQLS 114 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPL-KESRTI 155 S +V + LN + + L +NP + + K Sbjct: 115 QT--------------LSQASVRKIYSVLNNALKTAIKWNMLKENPLEFVKLPQKYEEKK 160 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 E + ++ ++++ ++++ G+R GE+C L W+++D + + I++ L Sbjct: 161 IKVWDIETVKKFLEDIKDEKIHTAVTLALHAGLRAGEICGLTWDNVDFEKKCIHIKQALQ 220 Query: 216 KDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 K PK++ R I++ + L + +E K+ Sbjct: 221 KIGKEIIIKPPKSKTSI-RTIYMTSYLYETLLEEYKRQEPLREAY------------KKL 267 Query: 272 CTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGAN 331 FV + G+ F D + + G + + RHT+A L A N Sbjct: 268 GNFVC-------IHETGNPFCPDYFTHTFKKLVSCLGYPEIRFHDLRHTFATILLQAQTN 320 Query: 332 PAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 P A +GH++ ++ +Y + E + L Sbjct: 321 PKIAAEILGHSNTKLFLNLYAHVLDEQKIKATHKIEEILG 360 >UniRef50_Q0H247 DNA integration/recombination protein n=6 Tax=root RepID=Q0H247_9CAUD Length = 394 Score = 191 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 65/361 (18%), Positives = 129/361 (35%), Gaps = 51/361 (14%) Query: 37 DLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 ++ K+ A+++LA+ +++ + + +++ G L + + Sbjct: 65 NILFKDFAQEWLAIYSETAKISTIRARKHELGHLMRYFGNLKL--------------KDV 110 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP 156 T + + G + T++ T +F+ ++ + NP + K+ +T+ Sbjct: 111 TRKMYQDMLLDLKKKGYADNTLDGIHTTGRMIFKKAMELELINSNPTEYAKVPKQKKTVE 170 Query: 157 D---------PLSREEFIRLIDACRNQ---QAKNLWCVSVYTGVRPGELCALGWEDIDLK 204 D L + E + + ++ YTG+R GEL AL W+DI+ K Sbjct: 171 DIESGNKDMKFLEKHELALFLKTAQEHGLAMDYVVFSTLAYTGMRLGELLALQWKDINFK 230 Query: 205 NGTMMIRRNLAKDR-------FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHII 257 T+ I + L R PKTQ G+ R I + I L+ K + Sbjct: 231 EHTIAITKTLYSPRNNERYYQLLPPKTQ-GSIRTIKVDPNIISLLKKHKAEQNEIKLRMG 289 Query: 258 DVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGL-RHRKSYQ 316 +++ FVF + G I ++ A + +H + Sbjct: 290 ELY---------HDLGFVF-------ARPSGFPEVPKKIEIRMKRLLRIANIHKHVTPHS 333 Query: 317 SRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPT 376 RHT+ + AG I ++GHAD + +Y + + +S F Sbjct: 334 LRHTHTSLLIEAGVGIKEIQQRLGHADIETTMNIYAHLTKDLEERASQKFSELMSNFIKN 393 Query: 377 M 377 + Sbjct: 394 L 394 >UniRef50_A8MGA1 Integrase family protein n=7 Tax=Clostridiaceae RepID=A8MGA1_ALKOO Length = 380 Score = 191 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 70/346 (20%), Positives = 124/346 (35%), Gaps = 31/346 (8%) Query: 35 RQDLTIKELAEKFLALK-ETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 + +T+ E ++ + + N Y+ + ++L I L EV+ Sbjct: 57 PKKITVHEYMTDWVENYIKENRKLNTYNRYKEIYN--------RHLKPYIGHLGLSEVKP 108 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 L + + + G S T+ N LN+ F V + DNP + I K + Sbjct: 109 IHLDQMLLGE-----KKKGLSGSTLQNIYGTLNSAFNRAVKLQIMYDNPLRFIDRPKRDK 163 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWC-----VSVYTGVRPGELCALGWEDIDLKNGTM 208 + L+ EE +L DA + + + + G+R GEL L W+ ID + Sbjct: 164 FVASTLAVEEIGQLFDALDTSKYNDYIMSLGLKIVLELGLRRGELAGLEWKYIDFNKQII 223 Query: 209 MIRRNLAKDRFTVPKT--QAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 I NL V T + R +++ K + L+ L ++ H++E Sbjct: 224 TIANNLVDTYTEVSLTTPKTDERRDLYVSKGLMQLLKQHKVLQTKNRMKY-RPHYKENEF 282 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGL-RHRKSYQSRHTYACWS 325 C FV E G + + ++ +K+ R+ + + RHT A Sbjct: 283 NGNV-CDFVMTWE-------DGTYVHPNYYTVKFNKLLKKVNFDRNIRFHDLRHTNATLL 334 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 L G + I ++GH+D +Y E L L Sbjct: 335 LQQGIDFKVIQTRLGHSDINTTLNIYSHVNVEMQKKATEKLIEILG 380 >UniRef50_UPI0001973B6A integrase family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973B6A Length = 408 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 81/349 (23%), Positives = 141/349 (40%), Gaps = 41/349 (11%) Query: 38 LTIKELAEKFLALKETEV-AKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKEL 95 LT+ + +L + + V + Y+ V K +I ++G K L I + + + KEL Sbjct: 66 LTLSVWFDNWLEIYKYNVIRDNTRVYYKQVFKKHIEPLLGHKRL-KDITQLHIRALLKEL 124 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 + G T N L ++ + + Y NP KGI K ++ Sbjct: 125 -------------DKQGLQFQTQNKVRVMLLDMYNKAILDNYAVRNPAKGIRLPKHNKRN 171 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 S EE I D C+ NL+ V+V TG+R GELCAL W+DIDL+ + + + L Sbjct: 172 KRVFSVEEQIDFFDCCKGTFYDNLFTVAVNTGLRQGELCALTWDDIDLEKKEINVEKTLL 231 Query: 216 KDR----------FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 + PKT+ +NR + + K AL+ Q+ ++ R+ Sbjct: 232 YQKLEGDTGKTFHINPPKTKT-SNRKVPINKQCEIALKKQLIQRN-------NIISRQSA 283 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAI----KRAGLRHRKSYQSRHTY 321 + EK +F + + + D +D+I+++ + + + RHT+ Sbjct: 284 KPEKGFENLLFTTKYATPI---CDQILIDAIKKIVNEINSVRSEIEQFEMFTPHCFRHTF 340 Query: 322 ACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 A AG +P I +GH+ QM +Y ++ L+ Sbjct: 341 ATRCFEAGISPKVIQTYLGHSTLQMTMDLYTSVFKHCEEKAISRLSEYF 389 >UniRef50_D2SF19 LigA n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SF19_9ACTO Length = 397 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 72/336 (21%), Positives = 132/336 (39%), Gaps = 52/336 (15%) Query: 32 GEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLE 90 AR +T+ + A+++LA + T V ++L Y +++ ++L G+ LA + + Sbjct: 57 APARGRVTVADWADRWLASQ-TGVKPSTLYRYGNLLRTHVLPTWGKHQLAD-VTHADVAV 114 Query: 91 VRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK 150 +LL G +A TV + + V +G + NP + + + Sbjct: 115 WVAKLLG-------------QGSAAGTVRQAHRVFSLLLGLAVRDGRIPRNPAERVPLPR 161 Query: 151 ESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 R+ P L+ +E RL DA + ++ + YTG+R GE+ AL +D + I Sbjct: 162 VIRSEPRFLTHDEVERLADAAGAE--GDVIRLLAYTGLRFGEMAALRVRRVDFLRRRLTI 219 Query: 211 RRNLA----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 + + F PKT R + L + L + Sbjct: 220 AEAVTEVGGRLEFGTPKTH--QQRTVPLPATLAEPLARRCE------------------- 258 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ-MWDAAIKRAGLRHRKSYQSRHTYACWS 325 KQ + G + + R+ ++D A++ AGL + RHT A + Sbjct: 259 -GKQGDDLLVTTAS-------GTVLRLRNWRRVVFDPAVRAAGLSDVTPHDLRHTAASLA 310 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNA 361 +++GA + +GHA A M VY + ++ A Sbjct: 311 VSSGATVKAVQRMLGHASAAMTLDVYSGLVDDDLAA 346 >UniRef50_D0ADR3 Predicted protein n=2 Tax=Enterococcus faecium RepID=D0ADR3_ENTFC Length = 382 Score = 190 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 69/350 (19%), Positives = 134/350 (38%), Gaps = 47/350 (13%) Query: 36 QDLTIKELAEKFLALKETEVAKTSL-NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKE 94 ++LT +E+ + ++ E V ++S T +IL G K+ ++ + Sbjct: 65 KELTFQEVYDLWIVNYEQTVKESSFVKTKEQFANHILPAFG---------AYKINKITID 115 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK---- 150 + + K V ++ N + + + + GYL DNP K I+ K Sbjct: 116 IAQKFANEKVKKFVLY--------REFINNASRICDYAIKLGYLQDNPLKKITVPKRKVS 167 Query: 151 -ESRTIPDPLSREEFIRLIDAC---RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNG 206 + S+EE + + ++ + + + +TG+R GEL AL W+DID + Sbjct: 168 VHEEDTLNFFSKEELEIFLKSVEKKKDIRMYSFFRTLAFTGMRVGELLALTWKDIDFNDN 227 Query: 207 TMMIRRNLAKDR-----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHF 261 + I + LA+ + PKT+ + R I + ++ L+ R Sbjct: 228 YIKINKTLARGKNRRLYVEQPKTKN-SKRDIPVDDETMNILKKWRLEQRKW--------L 278 Query: 262 REYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTY 321 G K VF + + ++ + R+ + IK+ L+ + RHT+ Sbjct: 279 LTLGINTLSKNQLVFSNQKN-------EYLQLSKPRKWLEVIIKQNNLKRITIHGLRHTH 331 Query: 322 ACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 A L AGAN + ++GH+ Q+ +Y + + Sbjct: 332 ASLLLEAGANIKDVQERLGHSSIQITMDLYIHITDKRKEKTATQFAKYIG 381 >UniRef50_UPI0001C375E4 hypothetical protein RflaF_02473 n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C375E4 Length = 399 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 126/358 (35%), Gaps = 29/358 (8%) Query: 32 GEARQDLTIKELAEKFLALK-ETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLE 90 G+ ++ ++ AE++ + + TS + + + IG L I + + Sbjct: 61 GQVTANIKFQDFAEQWFEEYAKLNLRNTSYERMKQLTVRVYPAIGHLRL-DKITSRHIQQ 119 Query: 91 VRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK 150 +L + S T ++++ ++ VF + V L DNP K ++ K Sbjct: 120 FINDLALN-----GKSLKNGRPLSRKTAVHHLSFISDVFSYAVKMEMLTDNPCKRVTVPK 174 Query: 151 ESRTIPDPLSREEFIRLIDACRNQ--QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTM 208 + D + EE L + + + +++Y+G R GE+ L W+DID ++ + Sbjct: 175 GEKKEKDIYTLEEVAHLFQLLETAPLKYRVFFTLAIYSGFRRGEMLGLEWKDIDWEHNVI 234 Query: 209 MIRRNL----AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY 264 +RR +K +T + R + + +D LR ++ Sbjct: 235 SVRRTSNYTASKGIYTDTTKTKKSQRSLKFPQSVMDLLRE----------------YKAE 278 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACW 324 E+ K +Q VK G ++ + R + RH YA Sbjct: 279 QDEERVKLGTKWQDYDRLFVKWDGRPMNNNTPYFWLKEFCEENNFRFCDIHSLRHFYASA 338 Query: 325 SLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNEA 382 + G + A ++ +GH+ +Y ++ + + L + Sbjct: 339 LINEGVDAATVSGALGHSTITTTTSIYCHVFNQAQARAGDAIASVLDFKKHDTGKGQT 396 >UniRef50_UPI0001C37E32 hypothetical protein RflaF_09962 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37E32 Length = 454 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 112/308 (36%), Gaps = 17/308 (5%) Query: 43 LAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIP 102 E+++ ++ T+++ YR + + E + LTG + Sbjct: 92 YIEEWIDHSSVKLQPTTIDGYRQLCGGRIRTFFESRGTTV-----------YDLTGEDLN 140 Query: 103 KSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSRE 162 + + + G + Y +++ + F + + Y+ NP K + ++ Sbjct: 141 EFYAYLAKQGLKGASQQRYHGLIHSAYSFLMKHQYIDSNPCDFADRPKAEKYRGAYYNQS 200 Query: 163 EFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVP 222 E L A + + ++ Y G+R E+ + W +ID NGT+ I + + + Sbjct: 201 ELTELFRAAKESEIYIPVLLAAYYGLRRSEVLGIKWSNIDFGNGTIRIAHKVVEQKVD-- 258 Query: 223 KTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSA 282 G R + K ++ + L + + + + + ++V + + Sbjct: 259 ----GKYRTVGHDKMKTESSNRILPLMKEVAMALRRLKLHQDEQRRLCGNSYVHEYDDYV 314 Query: 283 RVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHA 342 V G + + + +K GL+H + + RH+ A L G I +GH+ Sbjct: 315 CVNEIGQLLRPNYVTAKFSELLKENGLKHIRYHDLRHSCASLLLANGVPMKEIQEWLGHS 374 Query: 343 DAQMVFQV 350 + + V Sbjct: 375 NYRTTIPV 382 >UniRef50_C7TH34 Phage-related integrase n=1 Tax=Lactobacillus rhamnosus Lc 705 RepID=C7TH34_LACRL Length = 383 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 70/348 (20%), Positives = 133/348 (38%), Gaps = 46/348 (13%) Query: 38 LTIKELAEKFLALKETEVAKTSL-NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 +T K + ++ A + V +++ TY + K++L + G K INK ++++ + Sbjct: 67 MTFKAVYLEWDAAYKNTVRESTYERTYIQIKKHVLPLFGNKP----INKITTAQLQQAVN 122 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP 156 + NY ++T + + +F + GY+ NP + KE I Sbjct: 123 QWSKQVTRNY------------RRWLTTASRILRFALRRGYINKNPADLVIIPKEKEQIG 170 Query: 157 D----PLSREEFIRL---IDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMM 209 D ++E R IDA + Q L+ + + G+R GE AL W+DI + T+ Sbjct: 171 DVAANFWDKQELTRFFSYIDAKQEPQKTALFRILAFGGLRRGECLALTWKDISFTDSTIT 230 Query: 210 IRRNLAKDR-----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY 264 + + L++ PKT+ + R I + + AL+ + + Sbjct: 231 VNKTLSQGMNGRQLVQPPKTRK-SRRTITMDSKTMSALKHWRLVQ--------LQKYMAL 281 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHR-KSYQSRHTYAC 323 G + VF + H + + + HR + RH++A Sbjct: 282 GFNANKPDQLVFSNSKN-------KHLLLHKPADWLKSIEDTHKIEHRITIHGFRHSHAS 334 Query: 324 WSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 +AGA + ++GH+D + +Y N V L L+ Sbjct: 335 ALFSAGATVKEVQERLGHSDVKTTLNIYTHVTKNQNKEAVNKLVAYLN 382 >UniRef50_B0MMM2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MMM2_9FIRM Length = 398 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 128/365 (35%), Gaps = 42/365 (11%) Query: 22 FPSSRNLEKFGEARQ---DLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEK 77 F S E+ + ++ D+ I + + E + K++ +YR +I I + Sbjct: 59 FEQS-YAEQIAQNKKPASDIPIYDYMCAYYKKIEKNIQKSTAESYRGMINGRIRRYFTAR 117 Query: 78 N--LASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDN 135 SI + + + + + + A TV +Y T L++ F+ + Sbjct: 118 KDLTVGSITAKDIEDFYDWMFESHVV-------------ANTVIHYHTVLHSAFKRAFKD 164 Query: 136 GYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCA 195 G + NPF I K+++ D S EE I ++ R ++ G+R E Sbjct: 165 GLIESNPFDRIDRPKKNKFTGDNYSEEELIAMLGLIRGDIIYPAVMLAGGLGLRRSEALG 224 Query: 196 LGWEDIDLKNGTMMIRRNLAKDRFT--------VPKTQAGTNRVIHLIKPAIDALRSQMT 247 W +D + T+++ + + + + R + L P + L + Sbjct: 225 ARWSRVDWEKKTILLDTKIIEYKENGKVIVEPVEEMKNKSSRRTLPLPDPVYEMLCEERE 284 Query: 248 LTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRA 307 L + + R+Y + V G + + Q + I++ Sbjct: 285 KQDLYRRMFKGSYNRKY--------------DDYICVDQLGGLIRPNRVTQRFADLIRQY 330 Query: 308 GLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLN 367 GLR + + RHT+A + ++ +GH+D +Y +++ Sbjct: 331 GLRKIRFHDLRHTFASILINQDVPLLNVSTFLGHSDLSTTANIYAHLDKSKKQESADVIS 390 Query: 368 TQLSE 372 ++ Sbjct: 391 NIFNK 395 >UniRef50_Q72GH2 DNA integration/recombination/invertion protein n=5 Tax=Thermus RepID=Q72GH2_THET2 Length = 392 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 76/346 (21%), Positives = 132/346 (38%), Gaps = 38/346 (10%) Query: 35 RQDLTIKELAEKFLALKETE-VAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 LT ++ A +L E E + S+ + + + L + + + + +L EV+ Sbjct: 67 PSRLTTRDFALDYLKRLEREGLRPNSIRLAQEELAHALPSLKDPKAHDPLGRMRLQEVKP 126 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISP--LKE 151 + V + G + TVN + L A+F+ + +A NP + + K Sbjct: 127 VHVRAAVDR-----VAEAGYAPRTVNRVLMRLKALFREALRLELVARNPAEAVRLRLPKG 181 Query: 152 SRTIPDPLSREEFIRLIDACRNQQAKN---LWCVSVYTGVRPGELCALGWEDIDLKNGTM 208 +T L +E RL++A ++K+ L + + TG+R GE AL W DIDL+ G + Sbjct: 182 EKT-ARALEPQEVARLLEAAEASRSKDMALLLRLMLETGLRRGEALALQWRDIDLEAGEL 240 Query: 209 MIRRNLAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY 264 + R+ K R F+ PKT +V + + L +D F Sbjct: 241 TVWRSWTKARGKGAFSEPKTPTAKRKVPLPRGLLLRLKARREELLERLTPEEVDGLFLVG 300 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACW 324 G D+ +RAGL + + RHT+A Sbjct: 301 GV----------------------KPVDPDAFNHYLRRLAERAGLGRVRVHDLRHTWATL 338 Query: 325 SLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 +L+ G ++ ++GHA + VY + E V L L Sbjct: 339 ALSRGVPLEVVSERLGHASPTITLNVYRHLLEEERRGWVLDLEELL 384 >UniRef50_B6G0S2 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0S2_9CLOT Length = 376 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 71/342 (20%), Positives = 139/342 (40%), Gaps = 45/342 (13%) Query: 36 QDLTIKELAEKFLALK-ETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKE 94 D++ E EKFL+ ++ ++ Y+ + + E L I + + + Sbjct: 68 SDISFAEAREKFLSEYVANDLKDSTYTNYKQKLNKPQIKVLEIYLLKDIRAKHIQNIIDY 127 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE--S 152 + G S V N + ++++F F + + DNP + + Sbjct: 128 MALN-------------GFSKNMVKNTLRTISSLFNFCIRAELIKDNPCDKVVLPSKLTQ 174 Query: 153 RTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 L+ +E R+++ +N + +YTG+R GE C L W+++DL G + +R Sbjct: 175 PERKVALTNKEVKRILNRFKNTHWYLSLMLPLYTGMRRGECCGLRWKNVDLDKGIIYVRE 234 Query: 213 NLAKDR-----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRT 267 NL +D+ + PKT++ R I++ P ++AL+ Q+ Sbjct: 235 NLTQDKGKKWIISTPKTKSSI-RTINIPLPLLEALKWQL--------------------- 272 Query: 268 EKQKCTFV-FQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL 326 E+ K V + V++ G T D+++ + G++ + RHTYA + Sbjct: 273 ERNKSNNVATNSDTHVLVRDNGSIITNDTLKYLSRVINYDLGIK-FNYHNLRHTYATLLI 331 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNT 368 GAN ++ +GHA + +Y + + +LNT Sbjct: 332 EKGANIKDVSVLLGHASIKTTMDIYVNNTDNMRDKTLNILNT 373 >UniRef50_B1J5J4 Integrase family protein n=4 Tax=Pseudomonas RepID=B1J5J4_PSEPW Length = 396 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 89/377 (23%), Positives = 158/377 (41%), Gaps = 53/377 (14%) Query: 3 LRSSVCYAIKTGVF---DYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTS 59 LR+ V K G YA+ FP++R++ + + A+ +L ++ + + Sbjct: 49 LRAQVKGLDKLGALTAEKYAELFPNTRSVVVHEQTTPI--FFDYAQDWLN--SLQIVEGT 104 Query: 60 LNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 YR+ ++ + + +K + +I L ++ ++ S V Sbjct: 105 RKNYRSALQVYWVPYLADKPI-DTITSVLLRKIMNDI---------------KWTSPVRR 148 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQ--- 175 + L ++FQ V + + NP I K + DP ++EE +I Sbjct: 149 KGVVGLLVSIFQQAVTDELIVRNPALSIPGAKVPKREVDPFTKEEADSIIAHLYETTSGM 208 Query: 176 ---AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVI 232 + YTG+RPGE+ AL W +ID + T + R + +T+ +R + Sbjct: 209 TAIYAAYFEFCFYTGMRPGEVMALRWSEIDRRVKTANVCRIQIRGVIQD-RTKTKRSRKV 267 Query: 233 HLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFT 292 L A+ AL LT + +VF P + + Sbjct: 268 LLNDRALHALEKARPLTEA-------------------RSDYVFAPSGTGDRSE-MFIRS 307 Query: 293 VDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYG 352 S ++ W AA+++ G+R R+ Y +RHTYA L AG NPAFIA Q+GH+ Q++ Y Sbjct: 308 ETSQKRYWLAALRKLGIRRRRMYDTRHTYATMCLMAGMNPAFIAAQLGHS-VQVLLSTYA 366 Query: 353 KWMSENNN-AQVALLNT 368 KW++ N+ A++ L + Sbjct: 367 KWINSPNDWAELDKLKS 383 >UniRef50_B6W9U7 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W9U7_9FIRM Length = 370 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 77/364 (21%), Positives = 145/364 (39%), Gaps = 52/364 (14%) Query: 20 KQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKN 78 Q ++ ++ ++ ++T+ EL + +L L E V T+ V K +IL +G K Sbjct: 44 AQIEYAKLKKQGVKSICNITLNELLKDWLPLYEPTVKYTTYTRVYGVFKNHILPYLGNKK 103 Query: 79 LASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYL 138 L V ++L+ +++ + +N Y LN +F+F ++ GY Sbjct: 104 LDKITTP-----VIQKLINKKSQEIADFKL---------INIY---LNRLFKFAINQGYT 146 Query: 139 ADNPFKGISPLKESRTIPD----PLSREEFIRLIDACR---NQQAKNLWCVSVYTGVRPG 191 NP I + D +EE + + +Q + ++ Y G+R G Sbjct: 147 DYNPCLNIIYPTIRKEQKDMSLEYWDKEELKEFLYHAKKDLDQMWYLFFKIATYAGLRKG 206 Query: 192 ELCALGWEDIDLKNGTMMIRRNLA-----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQM 246 E+ AL W DID KN T+ + ++L+ K T PKT+ + R I + K I L + Sbjct: 207 EILALTWNDIDFKNKTLTVNKSLSVTRQSKKAITSPKTK-SSIRTISIDKTTIKELYNWK 265 Query: 247 TLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKR 306 K I+ ++F + S + ++S R+ ++ IK+ Sbjct: 266 IEQSKLKLQNIN--------------QYIFTTKQS-------ELINLNSPRKRFERVIKK 304 Query: 307 AGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALL 366 LR + + RHT+A AG + +++GH+ ++ +Y Sbjct: 305 HDLRKIRLHSLRHTHASLCFEAGMTIKDVQHRLGHSTSKTTMNIYIHVTKSQEEKNGQKF 364 Query: 367 NTQL 370 + Sbjct: 365 EKFM 368 >UniRef50_C9NE73 Integrase family protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NE73_9ACTO Length = 548 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 62/346 (17%), Positives = 117/346 (33%), Gaps = 39/346 (11%) Query: 33 EARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVR 92 EA + T+ +LA K + +++ YR ++N +L + KL ++ Sbjct: 166 EADPNQTVAAYLATWLAAKALVLKPSTMARYRDYVRN--------DLIPAFGTLKLDQLA 217 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 + + + G T+ + L++ V L P + Sbjct: 218 NRHIAAFVTSQLAV-----GCGRTTLYRCLATLSSALGDAVRQQRLPRTPASPPVLHRPP 272 Query: 153 RTIPDPLSREEFIRLIDACR--NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 + EE R + C + + +L+ V + TG+R GE L W D+ L G + I Sbjct: 273 SPERRIWTAEEAARFLTHCHQTDPEMADLFEVLIGTGMRKGEALGLHWNDVHLDQGVLYI 332 Query: 211 RRNLA-----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 R L+ + T PKT++ V + AI H R +G Sbjct: 333 RCTLSAVDNNRLVLTTPKTRSSRGWVAISPRVAIAF------------RHRARSAPRAHG 380 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWS 325 + VF + G + + AG+ + RH A + Sbjct: 381 DADDPFAGLVF-------CRPDGRPLGPHLVLDRLHRLSEEAGVPQVTVHDLRHLAATIT 433 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 ++AG ++ + H+ +Y + + V ++ LS Sbjct: 434 ISAGVPLTVVSKTLRHSTLSTTANLYSHLTQQAAHQAVDTIDHVLS 479 >UniRef50_C7GI02 Site-specific recombinase, phage integrase family n=12 Tax=Bacteria RepID=C7GI02_9FIRM Length = 431 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 74/381 (19%), Positives = 148/381 (38%), Gaps = 41/381 (10%) Query: 29 EKFGEARQDLTIKELAEKF--LALKETEVAKTSLNTYRAVIKNILSI-IGEKNLASSINK 85 +KF +LT+ +L + + LK ++ ++ Y I+NI + E+ L ++ Sbjct: 54 KKFVAKADNLTVGQLLDVWAEEELKTGTLSNGTVENYLGTIRNIKKHPLAERKL-KNVTS 112 Query: 86 EKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVD-NGYLADNPFK 144 E L L G P + G S ++++ + F+F V Y+ NP + Sbjct: 113 EHLQSFFDLLSFGGVHPDGK---ERKGYSKDYIHSFSAVMQQSFRFAVFPKQYITFNPMQ 169 Query: 145 GISPLKESRTIP-----------DPLSREEFIRLIDACRNQQAKNL--WCVSVYTGVRPG 191 I ++ + P+SRE++ RL+ + + + ++ Y G+R G Sbjct: 170 YIKLRYQTDEVDLFSDEDMDGNVQPISREDYERLLAYLQKKNPAAILPIQIAYYAGLRIG 229 Query: 192 ELCALGWEDIDLKNGTMMIRRNL----AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMT 247 E C L W+D++L+ + IRR++ +K ++ + T+ RV+ ++ R+ Sbjct: 230 EACGLAWQDVNLEEQCLTIRRSIRYDGSKRKYIIGPTKRKKVRVVDFGDTLVEIFRNARK 289 Query: 248 LTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHF---------------T 292 ++ +++ Y + K+K ++ R + + Sbjct: 290 EQLKNRMQYEELYHTNYYKEVKEKNRVYYEYYCLDRTQEVPADYKEISFVCLRPDGCLEL 349 Query: 293 VDSIRQMWDAAIKRA-GLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 ++ + K G +Q RHTY L GA P + +GH+D VY Sbjct: 350 PTTLGTVCRKVAKALEGFEGFHFHQLRHTYTSNLLANGAAPKDVQELLGHSDVSTTMNVY 409 Query: 352 GKWMSENNNAQVALLNTQLSE 372 + V LL+ + Sbjct: 410 AHSTRDAKRKSVRLLDKVVGN 430 >UniRef50_C7N3D0 Site-specific recombinase XerD n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N3D0_SLAHD Length = 443 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 71/388 (18%), Positives = 144/388 (37%), Gaps = 72/388 (18%) Query: 36 QDLTIKELAEKFLALKETE--VAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 + + E A ++ ++T + + +L ++ + +G L I + + + Sbjct: 73 ESMGFSEFAREWCKARKTTGALREKTLARDEQTVRLLSGYLGNVKL-KDITPQMVERL-- 129 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 Y + + T S T+N + + + NP K + P K Sbjct: 130 -----YDAIREDKRKTGKPYSETTMNRMHGTMRQIMDKAERYDLILRNPCKRVDPPKIED 184 Query: 154 TIPDPLSREEFIRLIDACRNQQAKN----------------------------------- 178 + L R E ++L+ A +++++ Sbjct: 185 SDRKSLGRAECVKLLRAIDSEESEMEQGYRAKEQRREEWNAARNAKKGPRGRLYGLGNLG 244 Query: 179 ---LWCVSVYTGVRPGELCALGWEDIDLKN------GTMMIRRNLA-KDRFTVPKTQAGT 228 + + TG+R GE+ L W D+ L G + + ++L+ + PKT+AG Sbjct: 245 RLEAVRIGLATGMRLGEVHGLKWSDVVLAERGGEWGGVISVSKSLSFSGKLQSPKTKAG- 303 Query: 229 NRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYG 288 NR I++ + +++ + ++ ++ RE G P+ + G Sbjct: 304 NRSINIDAHTAE----RLSWWKRTQAEMLGKIGREQG------------PDTFICCNDEG 347 Query: 289 DHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVF 348 ++ + + W RAGL + ++ RHT A L AG + + N+MGHA+A + Sbjct: 348 GSGSIPNFERWWREFRTRAGLPGLRYHELRHTQATQLLAAGVDVKTVQNRMGHANASITL 407 Query: 349 QVYGKWMSENNNAQVALLNTQLSEFAPT 376 Y EN+ AL+ + E P+ Sbjct: 408 DWYAHAQPENDVKAAALMGAIMEEEPPS 435 >UniRef50_C1CVL1 Putative Integrase n=1 Tax=Deinococcus deserti VCD115 RepID=C1CVL1_DEIDV Length = 444 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 70/359 (19%), Positives = 124/359 (34%), Gaps = 31/359 (8%) Query: 38 LTIKELAEKFLALKETEVAKTS-LNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 LT+ E+ +++ K ++ + LN +++L + A+ I+ +L + L Sbjct: 76 LTVGEMVTEYMRAKGATWSQRTALNNDALYTRHVLPELAHLK-AAGIDARRLRAYFEWLS 134 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR--- 153 P + G S L+ ++ + +G L DNP PL ++ Sbjct: 135 EKRPTPDGEGVRPPLGYSGQ--RQIHVLLSGAYKRAIADGLLRDNPATYARPLSPTKGGT 192 Query: 154 ---TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDID-LKNGTMM 209 EE R I+A + TG+R GE AL W D+ K G Sbjct: 193 VRAAKVKYFDPEELGRFIEAALKDRWALPLAFLALTGLRIGECLALTWADVQKDKTGADF 252 Query: 210 IRRNLAKDRF------TVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFRE 263 + + + F PKT AG R ++L A+ + + I+ Sbjct: 253 VEVSKTRSEFEGTYYTGGPKTAAGVRR-VYLGGDALALIEDMRRRVK------IEARAEG 305 Query: 264 YGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYAC 323 Y + VF G DS+RQ+ + AG+ + RH+ Sbjct: 306 YQGEGLKDHAPVFPSV-------DGRPMRQDSLRQIMRRTCEVAGVPLLSPHALRHSTGT 358 Query: 324 WSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNEA 382 + ++ G +P +A +GHA +Y + E L + P + Sbjct: 359 YLISRGHDPVSVAALLGHAQVSTTLNIYAHALPEKLRGLGYGLADLRGDAGPAVQEGVT 417 >UniRef50_C5CAV2 Site-specific recombinase, integrase family n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5CAV2_MICLC Length = 396 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 75/348 (21%), Positives = 124/348 (35%), Gaps = 48/348 (13%) Query: 38 LTIKELAEKFLALKETEVAKTSLNTYRA-VIKNILSIIGEKNLASSINKEKLLEVRKELL 96 T+ E +++ + +L Y A + L +GE + I++ + E + L Sbjct: 70 PTLAEFFPRYIEHRGLRCTPGTLAGYEAEAARTFLPRLGELPV-DMIDRRTVAEWIRWQL 128 Query: 97 TGYQIPKSNYIVTQ------------PGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFK 144 S TV N L+AV V G L NP + Sbjct: 129 QQPTARWRAAAARAAAATPPRPEPPLATVSPKTVRNAHALLSAVLGLAVQEGILPANPAR 188 Query: 145 GISPLKESRTIPD-PLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDL 203 G + SR E+ R A ++ + L V + TG R GE AL D+D+ Sbjct: 189 GADLPDDDVEEERGIFSRAEWARFYAAI-SESYQPLLIVLLVTGARWGEATALQVRDLDV 247 Query: 204 KNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDV 259 + +RR K + VPKT G R I L A++ L + R + E ++ Sbjct: 248 AASVIHVRRAWKKGKEGAVLGVPKTARG-RRTIMLPDWAVETL-EPLAAGRAADEFLLTA 305 Query: 260 HFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGL-RHRKSYQSR 318 G + + + W A+ AG+ +H + R Sbjct: 306 -------------------------PGGGVIHRTNFVERHWKPALAAAGIAKHLTPHSLR 340 Query: 319 HTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALL 366 HT+A W+L G + +++GH Q +VY + + A V + Sbjct: 341 HTFASWALMDGVPAQVVQHRLGHESLQTTSRVYAHLLLDAQRAAVDAI 388 >UniRef50_Q9F0J7 Integrase-like protein n=7 Tax=Staphylococcus RepID=Q9F0J7_STAAU Length = 378 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 58/343 (16%), Positives = 116/343 (33%), Gaps = 41/343 (11%) Query: 39 TIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTG 98 T KE+ E +L + V +++ + + + L + + Sbjct: 66 TFKEVYELWLEQYQNTVRESTYQR----------------VLTLFDTAILEHFQDVPIKK 109 Query: 99 YQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPD- 157 +P ++ + + + + VF++ V + DNPF ++ D Sbjct: 110 ITVPYCQKVINKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDA 169 Query: 158 ---PLSREEFIRLIDACRNQQ-AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 S +E + + + ++ +TG R GEL AL W DID T+ I + Sbjct: 170 STKYYSSDELKQFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKT 229 Query: 214 LAKD-----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTE 268 A+ PKT+ ++R I + L+S T R+ +YG Sbjct: 230 CARGANYKLVIQEPKTK-SSHRTISIDDKTASVLKSWRTHQRVES--------LKYGHNT 280 Query: 269 KQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTA 328 K VF + + D ++ + K + RHT+ A Sbjct: 281 SDKHQHVFT------TVRDNKPLYPEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEA 334 Query: 329 GANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 G + + +++GH D + +Y + + ++ Sbjct: 335 GLSIQEVQDRLGHGDIKTTMDIYAHVTEKQRDQVADKFAKYIN 377 >UniRef50_C3WPY1 DNA integration/recombination/invertion protein n=3 Tax=Fusobacterium RepID=C3WPY1_9FUSO Length = 416 Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 143/359 (39%), Gaps = 24/359 (6%) Query: 19 AKQFPSSRNLEKFGE----ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSI 73 K P +RN F + +++ + ++ + + + + Y ++ + +++ Sbjct: 73 KKYKPKNRNKIIFNKDLNLYNTEISFCDFICGYIKTRRKTIEDDTYSGYESIARCSLIPY 132 Query: 74 IGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGV 133 +N +KL E+ + Y + NY S TV +Y L+ VF++ + Sbjct: 133 FYREN-------KKLKEIEDFDIEKYYYHELNY----RNISPNTVLHYHYLLSLVFKYAL 181 Query: 134 DNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW--CVSVYTGVRPG 191 + + NP + K+ + + + + EE L+D + ++ + ++ Y G+R Sbjct: 182 RHKIITRNPLDSVEKPKKKKYVAEVYNAEEINILLDLLKREEENLYFGVLMAAYFGLRRS 241 Query: 192 ELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRL 251 E+ L W I+ + T+ I + + G + + K A +L Sbjct: 242 EVIGLKWSSINFEENTITIMSTVKETNID------GKHIFVCQDKTKSPAGLRSFSLPIE 295 Query: 252 SKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRH 311 KE ++++ ++ + + + + V + G + + + +K+ L+H Sbjct: 296 IKELLLEIKEKQEENKKYLGKGYYMEDKEYIYVDDGGKRLRPNYLTTRFGKFLKKFNLKH 355 Query: 312 RKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + + RH+ A A I +GH+ + ++Y M+ N+ + V +L +L Sbjct: 356 IRFHDLRHSCATILYDNNAGIKEIQTYLGHSSVKTTMEIYVHLMNRNDKSIVDVLGKKL 414 >UniRef50_B8I8G5 Integrase family protein n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I8G5_CLOCE Length = 378 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 62/338 (18%), Positives = 126/338 (37%), Gaps = 33/338 (9%) Query: 38 LTIKELAEKFLA-LKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 LT++ +L +K + +T+L YR +I K+L + KL E+ +L Sbjct: 68 LTVENWLTYWLDDIKAIKCEETTLYGYRNIIN--------KHLIPKLGNYKLQELNPTIL 119 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP 156 Y K S T+ + L + VD + NP + P+K + Sbjct: 120 NKYFKGK-----LDEKLSQNTIRKHYDLLKDTLKTAVDEEKILKNPLNKVPPIKVQKNEK 174 Query: 157 DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI---RRN 213 + + E+ L N + + + ++ G+R E+ L W++IDL+N + I R Sbjct: 175 NFYNVEQLKTLFTIVENDRMEIVVKLAGMLGLRREEIAGLKWDNIDLENRIITIAEARTQ 234 Query: 214 LAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCT 273 K + ++R ++ + I+ L S T K + + Sbjct: 235 AGKKTVAKGTKNSSSHRTLYAPEEIINLLTSIKTTQEEQKRLLGEA-------------- 280 Query: 274 FVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPA 333 ++ E G+ + + + ++ I L + + RHT+A + G N Sbjct: 281 --YKDEGYIMAWENGEPYRPNYLSDLFKKIIDDNKLPSLRLHDLRHTFASIANELGTNLY 338 Query: 334 FIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 I+ +GH+ Q+Y + ++ + ++ Sbjct: 339 DISKALGHSQVGTTSQIYTHMFDATHKKAISKIADVMT 376 >UniRef50_A4J884 Phage integrase family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J884_DESRM Length = 367 Score = 187 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 73/369 (19%), Positives = 145/369 (39%), Gaps = 39/369 (10%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 +S V + K +AK F + L K + + + + + +L + + + + TY Sbjct: 29 KSKVFHGKKREAEQFAKIFET--KLRKSLQPGSQMLVSDYLDYWLKRIQPSIEERTFKTY 86 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 +K + +G+ L + K+L V++ L I S +V T Sbjct: 87 SWHLKRLKETLGDIEL----GELKVLLVQERLNELKDI------------SETSVRKITT 130 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVS 183 + V L +P G+ + + LS +E I+ ++A + + + + Sbjct: 131 TFRTALRQAVVWELLEKDPTVGLRLPRNPKKEKKVLSSDELIKFLNAAKEYKYYLVLRIL 190 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNL-AKDRFTVPKTQA-GTNRVIHLIKPAIDA 241 TG+R GE L W+D++ GTM I R+ +K R + K + + R + + K ++ Sbjct: 191 AVTGMRLGECLGLMWKDLNFDKGTMKILRSADSKTRKVLDKPKNDSSRRTVTIDKETVEL 250 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWD 301 L++ K I + + VF G T +I + Sbjct: 251 LKTHRKKQAKRKVTSIRI-----------EDELVFHV--------NGRPITHKAIDRTIK 291 Query: 302 AAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNA 361 A+K+A L + + RHT L AG + +++ +GH+ +Y + + N Sbjct: 292 TALKKAELPMIRIHDLRHTAGSILLDAGYSLPTVSSLLGHSTPATTAAIYSHAIRRDINV 351 Query: 362 QVALLNTQL 370 AL ++++ Sbjct: 352 TDALSHSEI 360 >UniRef50_C0X0P7 Phage integrase family site specific recombinase n=4 Tax=Enterococcus faecalis RepID=C0X0P7_ENTFA Length = 369 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 73/347 (21%), Positives = 133/347 (38%), Gaps = 58/347 (16%) Query: 39 TIKELAEKFLALKETEVAKTSLNTYRAVIKNI-LSIIGEKNLASSINKEKLLEVRKELLT 97 T+ E E++L + + EV ++ +Y + N L +G+ L + I+ +L ++ ++L+ Sbjct: 67 TLNEWIEQWLVIVKKEVKLSTFASYSYKLSNYVLKTMGDSAL-NEIDDLRLNKLVEDLIA 125 Query: 98 GYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPD 157 G S T+ L+ V +L NP IS K R Sbjct: 126 -------------QGLSKSTICVIFGILSRALNHAVKAKHLKSNPCSTISLPKPKRRHIR 172 Query: 158 PLSREEFIRLID-ACRNQQAKNL-WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 L EE +L + A +N Q + L V+++TG+R GEL AL WEDI+ K T+ ++ Sbjct: 173 ALDIEEQKKLENVAYKNPQQQGLSVIVALHTGLRIGELAALRWEDINFKKDTIHVKHTFQ 232 Query: 216 KD-----------RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY 264 + + KT + R+I + +AL+ Q Sbjct: 233 RVSVSSFGESTQLYYDCTKT-INSERIIPMSNTVKNALKCQ------------------- 272 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACW 324 E + FVF + + + L +Q RHT+A Sbjct: 273 --KEHSQGKFVF--------SRNNKPCEPRLLTYYFHKLRDKVQLDKVHFHQLRHTFATR 322 Query: 325 SLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 L + ++ ++ +GH+ QM +Y + E + + ++ Sbjct: 323 CLESTSDIVSVSALLGHSSTQMTLDIYADSLLEQRIKAIKRMERTIA 369 >UniRef50_C0VGS2 Phage integrase n=2 Tax=Acinetobacter RepID=C0VGS2_9GAMM Length = 402 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 81/370 (21%), Positives = 153/370 (41%), Gaps = 53/370 (14%) Query: 22 FPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLAS 81 F + ++ A T + A+++L ++ + Y ++++ + + + Sbjct: 76 FKKADAAQESLPASHGPTFAQYAQEYL-YNLSDHKHGTKKKYLSILERLWMPLFADMPIN 134 Query: 82 SINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADN 141 +I+ + L + + + SA T N+ + L F+ D+ + N Sbjct: 135 TISSQML---------------RSAVNGREWSSAKTRNDALIPLRGAFELANDDEIIDKN 179 Query: 142 PFKGISPLKESRTIPDPLSREEFIRLIDACRNQQA------KNLWCVSVYTGVRPGELCA 195 P + K T PDP + E R+++ R + + V+ +TG RP E+ A Sbjct: 180 PCDRLKNQKTQETEPDPFNEIERERILNWLREKYLADYPTVYWYFVVAFWTGCRPSEIIA 239 Query: 196 LGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEH 255 L W+D+D N + I + T+ R + L A +A + LT L EH Sbjct: 240 LTWQDVDFLNKQIHINKGRVNGVQQET-TKTNKARFVDLNDFAFEAFQQLRLLTYLKYEH 298 Query: 256 IIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV-DSIRQMWDAAIKRAGLRHRKS 314 + G+ FT S+ + + AA+K G+R+R + Sbjct: 299 VF-------------------------ICDETGEEFTTQKSLSEKFVAALKANGIRYRPA 333 Query: 315 YQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFA 374 Y +RHTYA L G NP ++A+Q+GH+ M+ + Y KW++ + N + ++S A Sbjct: 334 YNTRHTYATVCLMNGLNPVYVASQLGHS-LVMLMKRYAKWINSDKNKEEI---AKISNSA 389 Query: 375 PTMPHNEAMK 384 +P + +K Sbjct: 390 KIVPKKKGIK 399 >UniRef50_C8X883 Integrase family protein n=5 Tax=Actinomycetales RepID=C8X883_NAKMY Length = 406 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 76/392 (19%), Positives = 132/392 (33%), Gaps = 37/392 (9%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLA-LKETEVAKTSLNT 62 R V K V + +R+ + Q T+ + +L + + TS + Sbjct: 36 RRHVMAKTKGVVVQKVRDLERARDQGQVRRPGQRWTVAAWLDHWLENIARPNLRATSYSA 95 Query: 63 YRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 Y+ ++ ++L I K +L + E L IV GR + Sbjct: 96 YQVAVR--------RHLIPEIGKHRLDRLEPEHLE----RLYRKIVADGGR-PGRAHQVH 142 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCV 182 + G++A N P + P + +E ++ R W + Sbjct: 143 RTIRTALGEAHRRGHVARNVAALARPPRVQLEPIQPYTVDEVRAIMSTARAHPNGARWAI 202 Query: 183 SVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRF------TVPKTQAGTNRVIHLIK 236 ++ G+R GE+ L W D+DL G + IR + + T K+ + I + + Sbjct: 203 ALALGLRQGEVLGLTWSDVDLDAGFLRIRTTRHRPTYAHGCGGTCGKSAGRCPQRIQMNR 262 Query: 237 PA----IDALRSQMTLTR-----LSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 A DA R + L L ++ + ++E R Q +VF V Sbjct: 263 AAGDTKSDAGRRVVGLPAALGELLREQRVEQERWQEAARQLWQNGDWVFTSRV------- 315 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 G S W A +K AG+R + + +RHT A L G + MG + M Sbjct: 316 GAPLNPSSDYHRWKALLKEAGVRDGRLHDARHTAATVLLVLGVPERTVMGIMGWSSTAMA 375 Query: 348 FQVYGKWMSENNNAQVALLNTQLSEFAPTMPH 379 + Y + L + P Sbjct: 376 AR-YQHVTDPIRRQVADQVGGLLWSDERSRPE 406 >UniRef50_Q24ZE5 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24ZE5_DESHY Length = 308 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 54/313 (17%), Positives = 116/313 (37%), Gaps = 36/313 (11%) Query: 79 LASSINKEKLLEVRKELLTGYQIPKSNYIVTQPG----RSAVTVNNYMTNLNAVFQFGVD 134 + + KL ++R L + + Q G S ++ Y L+++ + + Sbjct: 6 ILPQLGNLKLSDLRPGHLMKFYKYLEQDGIRQDGKPGKLSDRSIRYYHAVLSSMLEDAMK 65 Query: 135 NGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQ--QAKNLWCVSVYTGVRPGE 192 + NP + K R + L+ A ++ + + L +++YTG+R GE Sbjct: 66 WQLITSNPAARVEAPKVRRKQTTSYDETQSAELLQALYSEPIKYRVLTTLALYTGLRRGE 125 Query: 193 LCALGWEDIDLKNGTMMIRRNLAKDRFTVP---KTQA-GTNRVIHLIKPAIDALRSQMTL 248 L L W+ ID++N + + + T KT+ G+ R+I + + L+ Sbjct: 126 LLGLEWKVIDMENAQIAVVKQSQYTPETGVVDRKTKTEGSQRLISIPTSIVTLLKE---- 181 Query: 249 TRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIK--- 305 ++ E+ K ++QP G D++ ++ + Sbjct: 182 ------------YKAAQNEERLKVGSLWQPSDKLFTTWNGKPMHPDTVSSWFNDFLTRYN 229 Query: 306 -------RAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 +A L H + + RHT A + G +++++GH+ + +Y + Sbjct: 230 EKTIQQGKASLPHIRFHDLRHTSASLLIAQGVPLKNVSSRLGHSSIAITADIYASALQSA 289 Query: 359 NNAQVALLNTQLS 371 + L L+ Sbjct: 290 DKEAAQKLEDILN 302 >UniRef50_C9AZK9 Phage integrase n=6 Tax=Enterococcus RepID=C9AZK9_ENTCA Length = 410 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 62/352 (17%), Positives = 133/352 (37%), Gaps = 46/352 (13%) Query: 35 RQDLTIKELAEKFLALKETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRK 93 + ++A ++ + V +++ R + K+IL + GE+ I+K + +K Sbjct: 62 ESNRLFSDIALEWFEQYKNTVKESTYVVQRVALNKHILPLFGERR----ISKISIPYCQK 117 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 ++ Y K N + N++FQ+ + NP +G+ K + Sbjct: 118 QVNHWYSYYKKYS-------------NLIGMTNSIFQYAKSLRLIRRNPMEGVIRPKRQK 164 Query: 154 TIPD------PLSREEFIRLIDACRN--QQAKNLWCVSVYTGVRPGELCALGWEDIDLKN 205 I + ++ E + + + ++ + +TG+R GEL AL W+DID K Sbjct: 165 QIDEEKYTAPFYTKAEVLYFLQIAKKYPDPLYPMFHILTFTGLRKGELLALRWKDIDFKR 224 Query: 206 GTMMIRRNLA-----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVH 260 GT+ +++ L K F PKT+ + R I + + R + + Sbjct: 225 GTLSVKQTLTTVEDWKLAFQTPKTEK-SLRTISIDNQTLSIFRQCILKQKA-------FF 276 Query: 261 FREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHT 320 + + + +F E + + +D + +K L+H + RHT Sbjct: 277 LKTGRKPVENGAQLLFTTEEN-------KPYYLDFLNHNLTKILKENKLKHMTVHGFRHT 329 Query: 321 YACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 + +GA+ + ++GH D + +Y + +++ Sbjct: 330 HCSLLFESGASIKEVQVRLGHTDVRTTMDIYAHVSEQKKEETADRFADYMNK 381 >UniRef50_C0BF20 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BF20_9FIRM Length = 373 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 65/349 (18%), Positives = 127/349 (36%), Gaps = 49/349 (14%) Query: 35 RQDLTIKELAEKFLA-LKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 ++ +T+ E E +L K+ V + +Y K+ + + + ++L E+R Sbjct: 61 KEKITLMEWYETWLEEYKKNRVKIGTYTSYEKYYKS--------TINNRLGNKELSEIRG 112 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES- 152 E + K + + G + ++ LN Q + NG + NP K +++ Sbjct: 113 EHIQ-----KLYNDMVKEGYAISSIKIVSAILNGCLQQAMKNGLIERNPVKLAELPRQTG 167 Query: 153 -RTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 + +++E+ + + + V + TG+R GE+ L + DID K + +R Sbjct: 168 TKKERTAMTKEQQDLFMKYAEESYLYHFFSVMLRTGMRKGEMQGLKYSDIDKKQNVIHVR 227 Query: 212 RNLAKDRFT-----VPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 R L PKT+ T R I L + + +Q Sbjct: 228 RTLKYIEGKGYFEDTPKTRTST-RDIPLTAAITEHIEAQRKYWGFK-------------- 272 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKR-----AGLRHRKSYQSRHTY 321 V + + GD + + I+ D IKR S+ RHT+ Sbjct: 273 --------VVRMDQYLFCNENGDPISRERIQGEIDRIIKRIKSDGYDFPRITSHVFRHTF 324 Query: 322 ACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 A ++ AG P + +GH+ M +Y + + ++ + Sbjct: 325 ATRAIEAGMPPQVLKTILGHSSLAMTMDLYSHVLPDTKADEMQKIANVF 373 >UniRef50_P96629 ICEBs1 integrase n=1 Tax=Bacillus subtilis RepID=INT_BACSU Length = 368 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 72/348 (20%), Positives = 124/348 (35%), Gaps = 37/348 (10%) Query: 29 EKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKL 88 E+ + ++ L +LA E + + +I +S K+ I ++ Sbjct: 52 EERARKSRSVSFPTLISIYLASCEIDSKPNYYQNQKYIINKHISDYFLKSDIQKITHREI 111 Query: 89 LEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISP 148 + RK L+ + G S +VNN MT+L+ +F V L NP + Sbjct: 112 TDFRKHLM-------------ETGLSNKSVNNIMTSLSKIFDTAVHEEILKRNPCDNVKR 158 Query: 149 LKESRTIPDPLSREEFIRLIDACRNQQ--AKNLWCVSVYTGVRPGELCALGWEDIDLKNG 206 L +R EEF + I Q K + V+ TG+R GE+ AL W+DID Sbjct: 159 LPLTRKKMKFWRPEEFKKFISLIPQDQLLFKTFYTVAFLTGLRCGEMLALQWKDIDKILL 218 Query: 207 TMMIRRNLAK----DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFR 262 + + ++ T PKT+ R + + K + L + F Sbjct: 219 EIDVHKSCTWLDGQFVVTTPKTKNSIRR-VSINKKLLKLLERWKEAQ--------EELFN 269 Query: 263 EYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYA 322 E G T++FQ + + D + K + L + + RH++ Sbjct: 270 ELGIRHSHD-TYIFQYKDT--------PSRKDIFSRKIKYFCKDSDLTPIRLHDFRHSHV 320 Query: 323 CWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + G + I ++GH + VYG L+ L Sbjct: 321 ALLIHQGEDYITIKERLGHGSVKTTIDVYGHLYPNKQKEMADKLDDLL 368 >UniRef50_Q1BC50 Phage integrase n=4 Tax=Mycobacterium RepID=Q1BC50_MYCSS Length = 442 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 76/377 (20%), Positives = 134/377 (35%), Gaps = 68/377 (18%) Query: 39 TIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLT 97 T+ + +++ E + T+ ++ K ++ IG L +++ +LL + +LLT Sbjct: 65 TVTQFLDEWFTAVEASLDATTWQNWKDYAKSYVVPHIGNVKL-QQLDEPELLRLYAKLLT 123 Query: 98 GYQIPKSNYI----------------------------------------------VTQP 111 +I + P Sbjct: 124 EGRIKQDRNYEMYCYWRRHAIDGESPAPREVADACGTTIHAARAAVRRYKSGILPTKMDP 183 Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC 171 G + TV N ++ V Y A NP + P K SR+ ++E+ + + A Sbjct: 184 GLAPKTVRNIHAMIHRAMADAVAWKYKAHNPAANVRPPKRSRSRRTVWNQEDIQKFLRAV 243 Query: 172 RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNR- 230 + + +L+ + + TG+R G++C L W D+DL + + N G R Sbjct: 244 SHDRFASLFLLELTTGIRRGQICGLRWHDVDLDVREVTVHDNRVVVAGHARDKAGGKTRN 303 Query: 231 ---VIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 I + + ALR +RE+ E+ + P Sbjct: 304 ADQTIAIDRVTAAALRK----------------WREHQNEERAFFGADYHPGNYVFTFED 347 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 G DSIRQ +D AGL + RH+YA +L AG NP ++ ++GHAD Sbjct: 348 GRPPHPDSIRQRFDRLAAVAGLPRITFHDLRHSYATAALKAGVNPKIVSERIGHADVGFF 407 Query: 348 FQVYGKWMSENNNAQVA 364 Q Y + ++ Sbjct: 408 LQTYAHVLKNDDRDAAE 424 >UniRef50_Q03GP3 Integrase n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03GP3_PEDPA Length = 384 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 133/351 (37%), Gaps = 48/351 (13%) Query: 33 EARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEV 91 + + +++ +++ V +++L + +I ++L G+ Sbjct: 62 QEDERRFFRDVCAEWMEQYRLTVRESTLEKTQRIINIHVLPAFGDM-------------- 107 Query: 92 RKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE 151 ++ +V + A + ++ + +F + + Y+ NP ++ + Sbjct: 108 ---VINNITPNVCQKVVNKWFLEAKSYKKWLNYASMIFDYALRAEYVGRNPCTLVTMPRV 164 Query: 152 SR----TIPDPLSREEFIRLIDAC---RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLK 204 + + +R+E D R+ + ++ V Y+G+R GEL AL W+DI+ + Sbjct: 165 QEQAGEKLENFWTRDELNTFFDYVTPERDVEQFTMFRVLAYSGIRKGELLALTWKDINFE 224 Query: 205 NGTMMIRRNLAKD-----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDV 259 + T+ + + L + PK++AG R I L + LR + R + Sbjct: 225 DNTLRVNKTLTQGLGGKLIVQPPKSRAG-RRTIDLDDSTMRYLRQWKGVQRET------- 276 Query: 260 HFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRH 319 F G VF N ++++ + + AIK GL+H + RH Sbjct: 277 -FLGMGFNTNNVDQLVF-------ASNRNHFRSMNTPTKWLNKAIKATGLKHISIHGFRH 328 Query: 320 TYACWSLTAGANPAFIANQMGHA--DAQMVFQVYGKWMSENNNAQVALLNT 368 T+A +G ++GH+ D+ + VY + N A + Sbjct: 329 THASLLYQSGVGLKETQQRLGHSRADSSVTLDVYTHTTEQQNVAALQRFEN 379 >UniRef50_Q30S15 Phage integrase n=2 Tax=Campylobacterales RepID=Q30S15_SULDN Length = 393 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 73/354 (20%), Positives = 154/354 (43%), Gaps = 53/354 (14%) Query: 31 FGEARQDLTIKELAEKFLALKETEVAKTSL-NTYRAVIKNILSIIGEKNLASSINKEKLL 89 E + T+++ AE+F L++T++ +L +I G++ L I ++ Sbjct: 70 IEEEAKTWTLQDFAEEFFELQKTQIRPHTLERNIMHYNNHIAPYFGKRELGR-ITPLEIE 128 Query: 90 EVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPL 149 + +LL Y+ TV + + L +++ + N + NP + ++ Sbjct: 129 RWQNQLLQKYKHL--------------TVQKFRSILFSIYDKALHNDLVLKNPLEKVTAP 174 Query: 150 KESRTI----PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKN 205 K I +P + +E ++I+ N KN + TG+RPGE+ AL W DID + Sbjct: 175 KVQNNIKIEEINPFTEKELNQIIEHA-NGYMKNFIKLMAATGMRPGEIIALKWSDIDFEK 233 Query: 206 GTMMIRRNLAKDR----FTVPKTQ-AGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVH 260 T+ + R + + T+ +NR + ++ D+L +Q+ LT Sbjct: 234 RTIKVERTRLRAKKGEDIVDGLTKIKSSNRFVDMLNATHDSLMAQLELT----------- 282 Query: 261 FREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHT 320 ++F + + N+ D I + +K++G++ R Y RHT Sbjct: 283 ---------SNSEYIFLNQSNMPFYNH------DIIGVNFRKILKQSGVKARPLYNLRHT 327 Query: 321 YACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFA 374 +A ++ GA+ +++ +GH D + ++Y K++ E++ ++ + Q+ +F Sbjct: 328 FASQMISKGADITWVSKMLGHKDVSITLKIYTKFIQEDDETRLKKI-AQMDKFM 380 >UniRef50_A7GRV3 Phage integrase family protein n=18 Tax=Bacillus cereus group RepID=A7GRV3_BACCN Length = 376 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 61/339 (17%), Positives = 131/339 (38%), Gaps = 44/339 (12%) Query: 37 DLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKEL 95 D+ +L E ++ KET ++L Y+ +++ ++ G+K L S+I + +++ Sbjct: 60 DIRFSQLVEIWMQEKETTCRPSTLYQYKRILRSRVMPEFGDKKL-SNIKPLTVHNFHQKM 118 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 + + G + +++ L + GV+ ++ NP K K + Sbjct: 119 I-------------KEGLTTKYISSVDVMLKQILDKGVELEMISSNPAKKAKRPKVKKKA 165 Query: 156 PDPLSREEFIRLIDACR-NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL 214 + E+ + ID + + ++++TG+R GE+ AL W DID + T+ ++R L Sbjct: 166 QASWTIEQAMTFIDCAKLKGSYYIAFVLALHTGMRIGEVLALQWGDIDFEKKTIHVQRTL 225 Query: 215 A--KDRFTVPKTQA-GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 ++ + +T+ +NRVI + + +D L + KE+ +D+ Sbjct: 226 TLVDGKYVLGETKTEASNRVIPMTEELVDELVEY---QKYKKENPLDLLI---------- 272 Query: 272 CTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGAN 331 +IR A + + + + + R T+ + + N Sbjct: 273 ------------CTRNKKIVHPYTIRYQMKALCEAIDVPYIRFHDIRRTFTTILIDSNVN 320 Query: 332 PAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 +A +GH + +Y E L L Sbjct: 321 AKVVAKLLGHTNVSTSLNIYTDVYEERQIEAAEKLQNAL 359 >UniRef50_A0QAN7 Site-specific recombinase, phage integrase family protein n=3 Tax=Mycobacterium RepID=A0QAN7_MYCA1 Length = 370 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 69/348 (19%), Positives = 132/348 (37%), Gaps = 33/348 (9%) Query: 34 ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 AR LT+++ +LA ++ T+ Y +K + G+ + + K L ++ Sbjct: 48 ARSALTVEQACRDWLAGM-HDIEPTTRAAYTHALKPLRERHGDMAV-QQLTKSHLDQLVT 105 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 +L TG + +A ++N + ++ V V G LA + + LK Sbjct: 106 DLTTGKLDGQKRAW------TANSINPMLNLVSRVLADLVRQGALARDVAAFVKRLKRPE 159 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKN----GTMM 209 + + EE +L+ N + + W +++ G+R GE+C L W D+ L + GT+ Sbjct: 160 SKLTTFTEEEVRQLLKHVENDRLGHAWHLALA-GLRRGEICGLEWADVQLDDDRDAGTLT 218 Query: 210 IRRNLA----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 + N + PKT + R + L L+ L + + + + Sbjct: 219 VAHNRVSVGGRVHEKAPKT-VRSARTLPLTPTLARMLKRAKALQAAERLRLGPHYLGDGV 277 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWS 325 R V + G + D++ W A +R + + +RH+ A Sbjct: 278 R---------------VVVDDSGRPYHPDTLSDFWRELCGDAKVRRIRLHDARHSCASLM 322 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEF 373 G A I+ +GHAD + Y ++ N A L ++ Sbjct: 323 HAQGVPIAVISAWLGHADPAFTMRTYVHAENDALNLAAASLQKVVTPS 370 >UniRef50_C6WDZ8 Integrase family protein n=6 Tax=Actinomycetales RepID=C6WDZ8_ACTMD Length = 437 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 69/395 (17%), Positives = 143/395 (36%), Gaps = 23/395 (5%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLA--LKETEVAKTSLN 61 R V + V D + R+ + +A Q+ T++ + +L + V++ + + Sbjct: 41 RRHVRGKNQDEVSDKVSKLERMRDQGRVTKAGQNWTVETWLKHWLENIVAPPVVSENAYS 100 Query: 62 TYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTG-YQIPKSNYIVTQPGRSAVTVNN 120 Y ++ +L I +L++++ E L Y+ P S+ T + Sbjct: 101 AYEVAVR--------VHLVPGIGAHRLVKLQPEHLEKLYRAIMRKSTKFGPTTSSSTAHQ 152 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 + A V +L +NP K T +P S ++ L+ ++ W Sbjct: 153 VHRTIRAALNVAVRRKHLTENPALEARAPKLEETEVEPYSVDQVKALLVTALKRRNSARW 212 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAID 240 +++ G+R GE L W+D+DL+ GT+++RRN + ++ T+ + + Sbjct: 213 AIALALGLRQGEALGLRWQDVDLEVGTLVVRRNRLRPKWRHGCTEPCGKKHGGYCPQRVA 272 Query: 241 ALRSQMTLTRLSKEHIIDVH---------FREYGRTEKQKCTFVFQPEVSARVKNYGDHF 291 + + + + R+ E+++ ++ G Sbjct: 273 LREETAGTKSAAGKRGMGLPDELVRLLRVHRDVQARERERAAELWTDTGYVFTTPTGGPL 332 Query: 292 TVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 S W + A + + + +RHT A L G + MG ++ M + Y Sbjct: 333 NPRSDYDEWKRLLDIAKVPDGRLHDARHTAATVLLLLGVPERTVMGIMGWSNTAMAAR-Y 391 Query: 352 GKWMSENNNAQVALLNTQLSEFA--PTMPHNEAMK 384 + + L E A PT P +E + Sbjct: 392 QHVTAAIRLDVAQRVGGLLWEPAEKPTEPRDEGEE 426 >UniRef50_C9XJT1 Integrase n=6 Tax=Clostridium difficile RepID=C9XJT1_CLODC Length = 380 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 138/371 (37%), Gaps = 46/371 (12%) Query: 12 KTGVFDYAKQFPSSRNLEKFGEA--------RQDLTIKELAEKFLALKETEVAKTSLNTY 63 G FD + +S+ L + E+ ++T+ E FL ++ + N Y Sbjct: 40 NMGTFDKKR--EASKRLNEVKESLYNDGFLVPSEITVSEFLLDFLNKYSENISLATYNNY 97 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 ++ KN ++ SI K K+ ++ + Y S + ++ ++ Sbjct: 98 VSICKNYIN--------PSIGKYKIQDLHPVHIQNYIDKLSY------KLNPQSIKIHIN 143 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVS 183 L + + +N I + + + RE+ I+L+D +N + + ++ Sbjct: 144 ILKLAIKRAYRLKLIKENVMDSIEAPRYKKFKNEIYDREQMIKLLDLAKNTEMELPINLA 203 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTV----PKTQAGTNRVIHLIKPAI 239 + G+R E+ L W++ID + T+ + + ++ +V PKT+ + R I K + Sbjct: 204 IGLGLRISEVLGLTWDNIDFEENTITVNKITSRINGSVILKEPKTE-SSVRKISSPKELM 262 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 L+ ++++ R + D + + Sbjct: 263 SLLKEYKIKQN---KNLLKSSIRNN--------------NNLLFFNKKCEPIAEDVMSKK 305 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 + +++ L H + + RH++ + + I+ ++GH++ VY + E + Sbjct: 306 FKRFLEKNELPHIRFHDLRHSHVTLLINSKVPIKVISERVGHSNISTTLSVYSHVLKEMD 365 Query: 360 NAQVALLNTQL 370 ++ L Sbjct: 366 KEASDKISESL 376 >UniRef50_D0WGY0 Putative phage integrase n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WGY0_9ACTN Length = 353 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 67/346 (19%), Positives = 130/346 (37%), Gaps = 40/346 (11%) Query: 37 DLTIKELAEKFLALKETE--VAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKE 94 D I + + F+++KE + ++++ Y AV + I+ IG +++ +++ V Sbjct: 9 DRLICDYIDFFVSMKERSGAIERSTVRDYHAVARLIVRYIG----TCTVSDMEVMAVSDW 64 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRT 154 + + + + G + T + L+ +F V G + NP P ++ R+ Sbjct: 65 MAS----------MVRDGYAPKTCSKAFRLLSQALKFAVGQGAIDKNPCDFCKPPRQIRS 114 Query: 155 IPDPLSREEFIRLIDACRNQQAKNLWCV--SVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 L R E R++ R + + + ++ TG+R GE+CAL W D GT+ +RR Sbjct: 115 RFIALDRAERSRMLYLARQDDSPLGFAIEIALTTGMRRGEVCALKWSDFS-SRGTLTVRR 173 Query: 213 NLAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTE 268 L PK+ +G R I L +AL + Y Sbjct: 174 ALGNAEGGFYIKEPKSLSGI-RTIPLASDTNEALGRLKGAFLEANRSEGSASADGYIVGA 232 Query: 269 KQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTA 328 + + D + + + + G RHT+A + + A Sbjct: 233 GESGD---------------QPYNPDRLGRDFAQFCRDNGFEC-TFRDLRHTFATFMVGA 276 Query: 329 GANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFA 374 G + +A+ +GHA+ M +Y + E + + A Sbjct: 277 GVDVRTVASLLGHANVAMTLNIYAEADPEAKRRAAGAIERAFDDAA 322 >UniRef50_A6G3J3 Site-specific recombinase, phage integrase family protein n=3 Tax=Plesiocystis pacifica SIR-1 RepID=A6G3J3_9DELT Length = 363 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 71/366 (19%), Positives = 130/366 (35%), Gaps = 47/366 (12%) Query: 10 AIKTGVFDYAKQFPSSRNLEKF---GEARQDLTIKELAEKFLALK-ETEVAKTSLNTYRA 65 + G Y +Q ++ + +A Q T + A +F T ++ + Sbjct: 23 QTRRGAEAYERQLRNALLTGTYDKEAQADQAPTFRVFAREFQTNYVATNNKPSTQRSKER 82 Query: 66 VIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTN 124 V++ +++ G L +I + + L Y S T+NN++T Sbjct: 83 VLRLHLIPFFGYMRL-DAIGPRHIERYKATKLKDY--------------SRKTLNNHLTI 127 Query: 125 LNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACR-NQQAKNLWCVS 183 L + + + G + P I LK ++ L E RL++A R + + + + Sbjct: 128 LRKLLETAREWGLIDKVP--SIRWLKAAKPEFRWLDFAEAERLLEASRCEPEWRMMILLG 185 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALR 243 + TG+R GEL AL W+D+ + + +R+ +A+ PK +G R + L + Sbjct: 186 LRTGLRQGELLALRWQDVCFEARRIAVRQAVAEGILGTPK--SGRAREVPLSPATLAEFV 243 Query: 244 SQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAA 303 R + +VF G+ T + A Sbjct: 244 RHQARYRHLR------------------SPWVFCQLDGDHA---GEMLTKGMCKWPLRRA 282 Query: 304 IKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQV 363 RA L + RH++A G I +GH+ +M + Y V Sbjct: 283 RDRADLEALGWHDLRHSFASHLAMRGVPLKAIQELLGHSTIEMTMR-YAHLAPSTLIDAV 341 Query: 364 ALLNTQ 369 A L+ Q Sbjct: 342 AALDPQ 347 >UniRef50_Q831G3 Site-specific recombinase, phage integrase family n=1 Tax=Enterococcus faecalis RepID=Q831G3_ENTFA Length = 379 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 66/356 (18%), Positives = 125/356 (35%), Gaps = 34/356 (9%) Query: 24 SSRNLEKFGEAR----QDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNL 79 S+ L + E + DLT+K++ E + + + T + KN + + Sbjct: 41 ESKYLRLYHENKLTTNSDLTLKDIYEVYEEKYTQNLKPSYKQTQERIFKNYIEPYFKNTQ 100 Query: 80 ASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLA 139 I K+++ + ++ LLT K S T+N + +L +F + G Sbjct: 101 IKLIKKQQIYDFQQFLLTSKPKRKET-------LSNKTINMIIIHLQKLFNVAMKEGLSY 153 Query: 140 DNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQ--AKNLWCVSVYTGVRPGELCALG 197 +NP I LK + D + +EF I + K + + +TG+R GE+ AL Sbjct: 154 ENPCNQIDKLKVQKKEIDFWTLDEFTTFISHIDKNKPFLKVFYQFAFFTGMRAGEMIALT 213 Query: 198 WEDIDLKNGTMMIRRN---LAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKE 254 W DID N T+ I ++ + + T +NR I + L+ + Sbjct: 214 WSDIDFYNQTVRINKSAKLINGNYVTTTPKTESSNRYITINSKITAMLKKWQEIQPK--- 270 Query: 255 HIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKR--AGLRHR 312 + + VFQ H + D + I + L+ Sbjct: 271 -----LLIDNFQNIDSDKLLVFQYSE--------KHPSSDYYSKQIKKIIVKNNLNLKPI 317 Query: 313 KSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNT 368 + + RH++ + I ++GH+ YG + + + Sbjct: 318 RLHDFRHSHVALLIHNNEKNTTIKERLGHSSITTTIDTYGHLYPNSQKSMSDKFDN 373 >UniRef50_C6LG06 Prophage LambdaBa02, site-specific recombinase, phage integrase family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LG06_9FIRM Length = 429 Score = 184 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 77/381 (20%), Positives = 146/381 (38%), Gaps = 57/381 (14%) Query: 34 ARQDLTIKELAEKFLA-LKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVR 92 + ++++ + + ++ + + + Y +I+N L K K + R Sbjct: 59 SPSEISVADYLDYWMDNYCKMNLKYNTQLGYLNIIENHL-------------KPKFGQYR 105 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVD-NGYLADNPFKGISPLK- 150 ++ I + + G + TV+ ++ L+ F + V+ YL NP I K Sbjct: 106 LCAISAAPIQEYVNHLKTQGYAKSTVSGIISTLSGAFNYAVEPMHYLQYNPCNNIRYPKF 165 Query: 151 -ESRTIPDPL-SREEFIRLIDACRNQ-QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGT 207 +++T + S E+F R+I ++ Q + YTG+R E AL W+DIDL N T Sbjct: 166 RDTKTEARYIISPEDFQRIIARFDSRSQYYLPLMIGYYTGLRISEAFALTWDDIDLDNRT 225 Query: 208 MMIRR----------------NLAKDR------FTVPKTQAGTNRVIHLIKPAIDALRSQ 245 + + + N K F PKT AG+ R I AL+ Sbjct: 226 LSVNKITLKRNYGVDVRTVLQNKGKKEEKSAWYFGTPKT-AGSERTIKFGDALYHALKYA 284 Query: 246 MTLTRLSKEHIIDVHFREYGRTEK-QKCTFVFQPEVSAR-------------VKNYGDHF 291 ++ H + + Y + EK +K +F+ + R V+ G + Sbjct: 285 KKTQLENRLHYGEYYTDIYLKPEKDEKGDEIFRLIETERSIPCALNRANMICVRENGQYV 344 Query: 292 TVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 + DS + + + RHT+A + GA+ + ++GH + Q Q Y Sbjct: 345 STDSFKYCARVIHYDLKIA-FNYHSLRHTHATTLIENGADIKDVQERLGHDNIQTTMQTY 403 Query: 352 GKWMSENNNAQVALLNTQLSE 372 ++ V + +S+ Sbjct: 404 VHNTDTMSSRSVDIFEQAVSQ 424 >UniRef50_A9KI10 Integrase family protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KI10_CLOPH Length = 443 Score = 184 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 132/358 (36%), Gaps = 44/358 (12%) Query: 35 RQDLTIKELAEKFL-ALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 + +++ E ++ K V + ++ +Y + + K L I E + ++ Sbjct: 108 EERISLNAWYETWINEYKSMTVKQGTVESYECMYLYYVKPELGKRLIKDIRGEHIQKLYN 167 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK-ES 152 +L ++ G S T++ L A+F+ + N + NP + + E Sbjct: 168 DL-------------SRNGYSKSTISLIHVLLGAMFKQALKNELIKKNPVDFTTLPRAER 214 Query: 153 RTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 + L+ +E L+ + + + +S+ TG+R GE+ L W D+D + +R Sbjct: 215 KKERRVLTLKEQEILLKEITGHELEPVVRLSLATGLRVGEVTGLEWCDVDFNKKEVTVRG 274 Query: 213 NLAKDRFT------VPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 L R PKT T R I L+ L+ + + K + + ++ Sbjct: 275 TLKCTRKGMEYYKDTPKTDKST-RSIPLLDNMELMLKRYRIIQKEHK-LSMGIDWKPIEG 332 Query: 267 TEKQKCTFVFQPEVSARVKN--------------YGDHFTVDSIRQMWDAAIKRAGLRHR 312 E VF E +++ SIRQ + ++ + Sbjct: 333 LE----DLVFLREDGKPFSGQHIRQQLVHIVDGINEKYYSKKSIRQ--EKLLEE-KFDYF 385 Query: 313 KSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + RHT+A +L G P + +GH+ M +Y + + ++ L + + Sbjct: 386 TPHALRHTFATRALENGIPPKVVQEILGHSSITMTLDLYTHVLPQTKAQEMKKLESLI 443 >UniRef50_Q0REL9 Integrase (Recombinase) n=2 Tax=Frankia RepID=Q0REL9_FRAAA Length = 442 Score = 184 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 69/362 (19%), Positives = 124/362 (34%), Gaps = 58/362 (16%) Query: 38 LTIKELAEKFLA-LKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 LT+ + +L + +V ++L TYR ++N + + +L + E L Sbjct: 90 LTVDQWLTFWLDTIASRKVRPSTLATYRGYVRN--------RIVPELGGYRLDRLEPEHL 141 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP 156 + + G + TV ++ + G +A N + R Sbjct: 142 ESFYAACES-----DGLAPATVLQMHRIISRALKIAHRRGKVARNVATLVDAPTVQRDEV 196 Query: 157 DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWE--DIDLKNGTMMIRRNL 214 PLS +E ++D + + W V++ G+R GE L W D+D T+ +R+ L Sbjct: 197 SPLSAKEARAVLDTAKGGRNPARWSVALALGLRQGEALGLPWNAVDLDSTPATLTVRQAL 256 Query: 215 AKD--------------------------RFTVPKTQAGTNRVIHLIKPAIDALRSQMTL 248 + PK++AG R I L LR+ + Sbjct: 257 QRRAWAHGCTDPKSCGLARRCPQRTGGGLVIVHPKSRAG-RRTIVLPAGLAADLRAHRSA 315 Query: 249 TRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAG 308 + E E G + + VF + G + + W +K AG Sbjct: 316 QQQEAE--------EAGTGWRNEHGLVF-------TQPTGHPIDPSADHRAWKNLLKAAG 360 Query: 309 LRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNT 368 +R + + +RHT A L +P + MGH+ + Y E + + Sbjct: 361 VRAARLHDARHTMASLLLAQKVHPRVVMEIMGHSQISLTLGTYSHVAPELSTDAANQMGA 420 Query: 369 QL 370 L Sbjct: 421 TL 422 >UniRef50_A6TLJ2 Phage integrase family protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLJ2_ALKMQ Length = 382 Score = 184 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 127/348 (36%), Gaps = 43/348 (12%) Query: 38 LTIKELAEKFLALK-ETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 ++ + F+ E + + S + +IKN ++ + K++++ + L Sbjct: 62 ISFSDYLNYFIENYIEIHLRENSQRARQHIIKN--------HIRPAFGNYKIMQITSQAL 113 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP 156 + KS S ++ L+ F+ V+ ++ NP + K Sbjct: 114 QNFITKKS------KAYSKNYISMIHATLSTAFKMAVEWEFIRINPMTRVKVPKRDDQEM 167 Query: 157 D----PLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 D LS EE R + + + ++ +TG+R GE+ AL W DID N + + + Sbjct: 168 DKEIKTLSPEEVNRCAERLQGTHHYIPFMIAFHTGLRAGEVSALQWSDIDFDNQMLSVTK 227 Query: 213 NLAKD------RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 L F PKT+ +NR I + I L+S + +K +YG+ Sbjct: 228 RLDYSASKENWEFKPPKTR-SSNRTIAIGNELITILKSHSINQKKNK--------LKYGK 278 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL 326 + G+ +I ++ + I+ + + RHT+A L Sbjct: 279 HYTEND--------FICTFENGEVVITKAIGRVSEIIIRDVKI-DFNFHMLRHTHATMLL 329 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFA 374 AG NP + ++GH+ + Y E V L + Sbjct: 330 EAGINPKVVQERLGHSTVSITLDTYSHITIEFQKTAVLEYEKYLQKIK 377 >UniRef50_C3IU95 DNA integration/recombination/inversion protein n=2 Tax=Bacillus thuringiensis RepID=C3IU95_BACTU Length = 392 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 120/360 (33%), Gaps = 51/360 (14%) Query: 35 RQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKE 94 D+ K+ +++L + +SL + ++ + I K+ + Sbjct: 63 EPDILFKDFVQEWLNIYSKSTKISSLRVRQKQSNKLVDFFANIKM-KDITKKMYQTALND 121 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE--- 151 L G + T++ T +F+ ++ + NP + ++ Sbjct: 122 L-------------HDKGYAFNTLDGIHTAGRMIFKKAIELQIIKSNPTDNVKLPRKVET 168 Query: 152 ------SRTIPDPLSREEFIRLIDACRN---QQAKNLWCVSVYTGVRPGELCALGWEDID 202 + L +EE + + + + Y+G+R GEL AL W D+D Sbjct: 169 VEDIENDKKAIKYLEKEELAHFLQVAKEKGLDNDYVFFSILAYSGLRAGELLALKWTDVD 228 Query: 203 LKNGTMMIRRNL-------AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEH 255 +N T+ I + L PKT+ G+ R I + + + L+S K + Sbjct: 229 FENNTIKITKTLYNPDNNSQHYHLLTPKTK-GSIRTIKMDQGIMKLLKSHKAKQNELKLY 287 Query: 256 IIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGL-RHRKS 314 + +V Q V + Y + I+ IK + + ++ Sbjct: 288 --------------TRPQYVDQGFVITKASGYPEVM--KMIQNRLKRLIKLSNITKNITP 331 Query: 315 YQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFA 374 + RHT+ + AG I ++GH D + +Y + + F Sbjct: 332 HSFRHTHTSLLIEAGVGIKEIQQRLGHTDIETTMNIYAHMTKNMEEKASQKFSELMKGFV 391 >UniRef50_D1CCF9 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCF9_THET1 Length = 357 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 70/343 (20%), Positives = 126/343 (36%), Gaps = 53/343 (15%) Query: 37 DLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKEL 95 LT+++ ++L ++ E+ ++ Y+ +I+ +I +G + L + Sbjct: 60 KLTLEQYLAEWLEVRSRELRVSTRVNYQRLIEQHICPALGGRRLQAL------------- 106 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 + S ++ R L+ V G LA NP + P K R Sbjct: 107 ---AALELSRWLAGLGERLPRRAQEAYALLHKALADAVRLGLLATNPLDRVEPPKHQRRR 163 Query: 156 PDPLSREEFIRLIDAC---RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 P +R++ LI A + L + +G R GE L W D+D + G++ I R Sbjct: 164 PTLPARDQIALLIAALEAGKAGWYSELLLFLLGSGCRIGEALGLEWGDVDWQEGSVRISR 223 Query: 213 NL----AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTE 268 L + + PK++AG RVI L A++ALR Q ++ G+ Sbjct: 224 QLLEVGGEVHESPPKSRAG-ERVIALPAFALEALRQQRA--------------KKLGK-- 266 Query: 269 KQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTA 328 + + G ++ + A GL + + RH +A A Sbjct: 267 ------------YCFLSSTGTTPCRRNVLRALHAVCAELGLPRLRIHDLRHVHASLLAHA 314 Query: 329 GANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 G P +++GH+ + QVY + + L L Sbjct: 315 GVPPKVAQSRLGHSSPMVTLQVYQHVLDGADREAALRLERVLG 357 >UniRef50_C2BD46 Possible phage integrase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BD46_9FIRM Length = 377 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 64/353 (18%), Positives = 131/353 (37%), Gaps = 49/353 (13%) Query: 35 RQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRK 93 +++ T KE+ E++L L V +S +++ +I IG K L SI L E+ Sbjct: 59 KKNPTFKEIGERWLELYSKTVKYSSYQRTKSLFNTHIYPFIGNK-LLKSITTAMLQELT- 116 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPL---- 149 + + + + + VF + + + NP + Sbjct: 117 ---------------NKKSKELASFSKINAQIKRVFDYAISRDIVDYNPALSVIYPITNV 161 Query: 150 -KESRTI-PDPLSREEFIRLIDACRNQ---QAKNLWCVSVYTGVRPGELCALGWEDIDLK 204 R + ++E + AC+ + + YTG+R EL AL W DID Sbjct: 162 NSVDRYESIEFWEKDELKEFLTACKKDLDFMWFCYFWILSYTGMRKSELQALEWADIDFN 221 Query: 205 NGTMMIRRNLA-----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDV 259 T+ I ++L+ K + KT+ T + L + + + K+ +I Sbjct: 222 RRTININKSLSVYKDNKKFISSTKTKNSTRIITIDSITVKLLLDWKQQQSEIYKKTVIKG 281 Query: 260 HFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRH 319 ++Y T+K + + ++ R+ + +K LR + + RH Sbjct: 282 KTQKYVFTDKSL-----------------ELTSHNAPRKRFLRVLKNNNLRKIRLHSLRH 324 Query: 320 TYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 T+A AG + + +++GH++ + +Y ++ +S+ Sbjct: 325 THASLCFEAGMDIKDVQHRLGHSNIETTLNIYVHISKIKERKSISKFEDFMSD 377 >UniRef50_A1AN30 Phage integrase family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AN30_PELPD Length = 367 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 68/339 (20%), Positives = 128/339 (37%), Gaps = 49/339 (14%) Query: 31 FGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLE 90 F + T +LAEK+L + A+ + ++ + GE L I E+L Sbjct: 59 FNRKKYTTTFDQLAEKYLEYCK---AQRDYKSKAGRVRRLQRTFGEMRLID-ITLEELER 114 Query: 91 VRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPL- 149 + T + PK V+ S TVN +T L +F G + D+ K + + Sbjct: 115 YQSARCTEAKQPKKEGGVSSGAVSPATVNRELTALKNMFTKAEQWGLIPDSTLKTVRKVR 174 Query: 150 --KESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGT 207 KE+ L+ E L+D+C ++ + + ++ TG R GE+ +L W+ +DLK+G Sbjct: 175 LTKENNRRLRFLAVAEMTALVDSC-SRGLREIVVFALNTGCRRGEILSLTWDHVDLKHGF 233 Query: 208 MMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRT 267 + I ++ G +R I + D + G Sbjct: 234 IRIA-----------DSKNGESRDIPINAALADMFK---------------------GVV 261 Query: 268 EKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLT 327 + +VF + +++ + A +RA + + + RHT+A + Sbjct: 262 RRIDSPYVFTNPDTGT--------RYQDVKRSFATACRRAAIMNFHFHDLRHTFASHLVM 313 Query: 328 AGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALL 366 G + ++ +GH M + Y ++ V L Sbjct: 314 NGVDLTTVSRLLGHKSLTMTLR-YSHLAPDHLKKAVERL 351 >UniRef50_Q7P8B6 DNA integration/recombination/invertion protein n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P8B6_FUSNV Length = 405 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 61/339 (17%), Positives = 135/339 (39%), Gaps = 20/339 (5%) Query: 36 QDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKE 94 ++++ ++ ++ + + ++Y + K +IL ++N +KL ++ Sbjct: 83 KEISFCNFILGYVKMRFKTIDDATYSSYLSNTKISILPYFFKEN-------KKLKDINTF 135 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRT 154 + Y + N G SA TV +Y L+ F++ G + NP + K+ R Sbjct: 136 DIQKYYFHELNV----RGVSANTVIHYHNLLSLTFKYAQKIGIITINPMLNVEKPKKVRY 191 Query: 155 IPDPLSREEFIRLIDACRNQQ--AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 I + E+ +++ + + ++ + G+R EL L W I+ + TM I Sbjct: 192 IAKVYNHEQIKEMLEILKKEDKVLYLGVVITSFFGLRRSELLGLKWSAINFVDNTMSIVH 251 Query: 213 NLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKC 272 + + G N +I K A L KE ++++ + E+ Sbjct: 252 TVTETNLD------GKNILIKKDKTKSTAGLRSFVLPGSIKEMLLELKEEQKRNKERLGK 305 Query: 273 TFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANP 332 + + E V G+ + + + + L H + + RH+ A + N Sbjct: 306 GYYTKDEEYVYVNEGGELHKPKFLTNGFRKFLAKHNLTHIRFHDLRHSCATILCESNVNV 365 Query: 333 AFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 I +GH+ A+ +Y M+++N + V+++N ++ Sbjct: 366 KDIQMFLGHSSAKTTMDIYVHQMNKSNLSTVSIINEKIG 404 >UniRef50_Q8ETV2 Integrase n=3 Tax=Bacilli RepID=Q8ETV2_OCEIH Length = 392 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 132/354 (37%), Gaps = 39/354 (11%) Query: 33 EARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVR 92 LT +E+ E++ EV T++ + + + K+ ++ Sbjct: 62 RQNDQLTFQEVFEEWFKQHRREVKPTTVYAMESKFN--------RRILPVFGPYKMKDIT 113 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 + + + T +Y N VF++ + + NP ++ K Sbjct: 114 RSHCQKAINGWAKEL--------KTFKDYKIQANQVFRYAMKMDMIKRNPMDYVTLPKLK 165 Query: 153 ---------RTIPDPLSREEFIRLIDAC-RNQQAKNLWCVSVYTGVRPGELCALGWEDID 202 +REE ++A ++ A + + +TG R GEL AL W D+D Sbjct: 166 HEMEYVAELEEKKHYYTREELRTFLEAIQKDDMAYTMLRLLSFTGARKGELYALHWSDVD 225 Query: 203 LKNGTMMIRRNL----AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIID 258 ++ +++ L + + KT+A + R++ + + L+ + + + ++ Sbjct: 226 FHQKSISLKKTLIYTGGEKQLQTSKTKA-SRRIVSVDDETLAILKKWRS--KQIQRYLTL 282 Query: 259 VHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRA-GLRHRKSYQS 317 + +KQ V+ ++K+ D+ + + + ++ L K ++ Sbjct: 283 ELAAPFQSDDKQPIFTVYN-----QLKHEMDYCRLAYLNDKLERIYQKNPELPQIKVHEF 337 Query: 318 RHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 RHT+A AGA+ + +++GH D Q +Y E + ++ Sbjct: 338 RHTHASLLFAAGASIKDVQSRLGHTDIQTTMDIYTHVTDEAKEKTAEMFQKYMT 391 >UniRef50_A1AUY6 Phage integrase family protein n=2 Tax=Desulfuromonadales RepID=A1AUY6_PELPD Length = 402 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 75/350 (21%), Positives = 136/350 (38%), Gaps = 50/350 (14%) Query: 28 LEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEK 87 + G+ R DLT +E + + +T + + + + I+G+ L +I Sbjct: 100 AAERGKVRADLTFEEFSTQHYLPHAKAHKQTWDDDKNQIERRLNPILGKLRL-QAITPRD 158 Query: 88 LLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS 147 + V + + +A T N+ + L + V G L NP G Sbjct: 159 VAMV--------------HSKEKERTTACTANHLLATLKRMLNLAVKWGLLEKNPAGGQE 204 Query: 148 PLKESRTIPDPLSREEFIRLIDACRNQQA---KNLWCVSVYTGVRPGELCALGWEDIDLK 204 KE LS+EE + + A +Q + +YTG R E+ +L WE++ L Sbjct: 205 KFKEGPLRERYLSKEELPKFLKALEDQDDLLSVAALRMLLYTGCRREEIMSLRWENVRLD 264 Query: 205 NGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY 264 +R +PKT+ G +R +HL A KE I D+ R+ Sbjct: 265 E-----------ERIFLPKTKNGRSRTVHLNARA--------------KEVIQDLQARKD 299 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACW 324 + +VF P K Y + +R+ ++ A AG+ + + + RHT+A Sbjct: 300 QEDRTRGSEYVF-PSRQGTKKGY-----IYDLRKPFEKACLNAGIDNFRIHDLRHTFASM 353 Query: 325 SLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFA 374 ++++GA+ + +GH D M Q Y +++ ++ A Sbjct: 354 AVSSGADLYAVQRLLGHQDIAMT-QRYAHLNADDLKKATEGVSEMFDRAA 402 >UniRef50_A5KPC6 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A5KPC6_9FIRM Length = 400 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 74/351 (21%), Positives = 131/351 (37%), Gaps = 38/351 (10%) Query: 36 QDLTIKELAEKFLAL-KETEVAKTSLNT----YRAVIKNILSIIGEKNLASSINKEKLLE 90 + +T+ + L K+ V T++ Y A +KN IG+ L Sbjct: 64 ESITLNAWYVTWTELYKKKTVKMTTIYKNHSYYNARVKN---SIGKMYL----------- 109 Query: 91 VRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK 150 + + Y + K + G + TV+N L+ +F V + Y+ NP + Sbjct: 110 ---QDIKTYHVQKFINELIDSGLAHGTVSNIRFMLSDMFDKAVLSEYIRKNPCIAVEMPP 166 Query: 151 ESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 + + L+REE + + N+ +V TG R GE+ L WED D + + I Sbjct: 167 KVKKERRVLTREEQKKFFTFASSYIHINVLKFAVTTGCRIGEVLGLKWEDCDFEKREITI 226 Query: 211 RRNL-----------AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSK--EHII 257 + + +K +T KT +NRVI + + L++Q K + I Sbjct: 227 NKTIHYSKASSPVEGSKFFYTTAKT-ISSNRVIPMTDEVYEILQNQKIKQTEQKMWKRSI 285 Query: 258 DVHFREYGRTEK--QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSY 315 +E+ + V+ V++ +K+Y V I + + + Sbjct: 286 WKQHKEFQNLVFTCSDGSPVYYYNVNSAIKDYVAKINVIEIELAKEEKREPKIFELFTCH 345 Query: 316 QSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALL 366 RHTYA G + + +GH+ M +Y E +VA L Sbjct: 346 TLRHTYATRCYENGVDQQVVQKLLGHSTLAMTTDLYTHVSEEKKKEEVAEL 396 >UniRef50_A6NY15 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NY15_9BACE Length = 417 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 66/353 (18%), Positives = 132/353 (37%), Gaps = 28/353 (7%) Query: 26 RNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVI-KNILSIIGEKNLASSIN 84 + + + + T+ E +++ + + EV ++ Y V K++ +G L + I Sbjct: 53 KQVSTRPVVKTEYTLDEWYAQWIKVYKYEVRDSTRLQYSHVYTKHVSPALGH-YLLTQIT 111 Query: 85 KEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFK 144 ++ ++ + G S N L +F + + + NP + Sbjct: 112 TLEVKRFLNDM-------------KKRGFSFEMRNKARIVLLDLFDKAIMDDFAFKNPAR 158 Query: 145 GISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLK 204 GI +++ R P LS+EE + D C+ + L+ V+V TG+RPGEL AL W D++LK Sbjct: 159 GIKVVRDERVEPRVLSKEEQVDFFDTCKGTFYEELFTVAVLTGLRPGELFALRWSDVNLK 218 Query: 205 NGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY 264 + + R L + +A H+ P ++ K ++ ++ Sbjct: 219 EKYLDVTRTLLYQKLEGDTGKA-----FHIHPPKTATSLRRVYFDERCKLALMSQFRKKS 273 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAG--------LRHRKSYQ 316 + ++ + + E V Y + + Sbjct: 274 NISLRETSSPLEGLEDLLFVTKYNTPLNSSLYSSAIQRIVDLINESRSAVDQFETFSGHC 333 Query: 317 SRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQ 369 RHTYA + A +P + Q+GHA +M +Y + ++ L+ Sbjct: 334 FRHTYATRAFEADVDPKVVQKQLGHATLKMTMDLYTHLFEDKKLEELTKLDAH 386 >UniRef50_C5WEI1 Site-specific recombinase, phage integrase family n=9 Tax=Streptococcus RepID=C5WEI1_STRDG Length = 384 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 71/358 (19%), Positives = 134/358 (37%), Gaps = 36/358 (10%) Query: 21 QFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNL 79 +S LE+F + T E+ EK+ + V T+ + + + +IL ++G+ + Sbjct: 52 YLKASGRLEEFIKPTHK-TYNEIFEKWYQAYQDTVEPTTASRTLDIFRLHILPVMGDLPI 110 Query: 80 ASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLA 139 S I+ E ++ + + VF F + L Sbjct: 111 -SKISPLDCQNFITEKAKVFKN----------------IKQIKSYTRKVFDFAIKMKLLK 153 Query: 140 DNPFKGISPLKESRTIPD-PLSREEFIRLIDAC---RNQQAKNLWCVSVYTGVRPGELCA 195 NP I K +T + + +E + + L+ + Y+G+R GEL A Sbjct: 154 HNPMTEIIMPKRKKTRIENYWTVQELQEFLAIVLQEEPYKHYALFRLLAYSGLRKGELYA 213 Query: 196 LGWEDIDLKNGTMMIRRNLAK-DRFTVPKTQAG--TNRVIHLIKPAIDALRSQMTLTRLS 252 L W DID ++ T+ + ++L + D + K+ + R I L I L+ ++ + Sbjct: 214 LKWADIDFQSETLSVNKSLGRLDGQAIEKSTKNDFSVRKIKLDSETISILQEWKSINQKE 273 Query: 253 KEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHR 312 K + + KQ F + + + D I + I++ LR Sbjct: 274 KAQLAVAPL-----SIKQDFIFTYCTRTGSI-----EPLHADYINNVLSRIIRKHSLRKI 323 Query: 313 KSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + RHT+A + G +P A ++GHA +QM Y + + + L Sbjct: 324 SPHGFRHTHATLMIEIGVDPVNTAKRLGHASSQMTLDTYSHSTNNGEDRSIKQFADYL 381 >UniRef50_C8NHZ6 Phage integrase family site-specific recombinase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHZ6_9LACT Length = 393 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 61/360 (16%), Positives = 125/360 (34%), Gaps = 53/360 (14%) Query: 35 RQDLTIKELAEKFLALKETEVAKTSL-NTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 +Q T +EL ++L + V ++ T K+IL G+ I+ + + + Sbjct: 70 KQKFTYRELYNEWLVTYQKRVRPSTFQATVTYFKKHILPAFGDYY----IDTITIQDCQA 125 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE-- 151 ++ Y + +Y +F++ + NP + K Sbjct: 126 QVNRWYSNY------------PKSTQSYKIYAQMIFKYAQKLNLIEKNPMSLVDLPKSGD 173 Query: 152 -SRTIPDPLSREEFIRLIDACRN-QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMM 209 RE IR ++ ++ + + YTG+R GE AL W DID +N ++ Sbjct: 174 FKDDKLKYYDRETLIRFLEYIEPFKEVYTFFYLLSYTGLRCGEAFALTWNDIDFRNHSIS 233 Query: 210 IRRNLAK----DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 + + +A+ + KT+ G R I + + L+ Sbjct: 234 VNKTVARSMEDKYISQTKTKNGM-RTIRINGSLERLISEWKELSGNE------------- 279 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWS 325 T+VFQ ++ ++ ++ + ++ + RHT+A Sbjct: 280 -------TYVFQNRNNSF-------YSSNTAVYWLNQILEGTNFPRITPHGFRHTHASLL 325 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNEAMKN 385 AGA+ I +++GH D Q +Y + + + +S + +N Sbjct: 326 AEAGADLKDIQDRLGHGDIQTTANIYTHVTNNKKDNTNDKFDKLMSIEGQKDGQKQKTEN 385 >UniRef50_A8RCT4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCT4_9FIRM Length = 375 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 86/347 (24%), Positives = 148/347 (42%), Gaps = 39/347 (11%) Query: 28 LEKFGEARQDLTIKELAEKFLALKETEVAKTS-LNTYRAVIKNILSIIGEKNLASSINKE 86 LE ++T+ +L KF+ K+ + + + T + K+IL ++G L S++ E Sbjct: 61 LESTTGVSSNMTVNDLYIKFMDQKKLVIRERTFYQTDLSFKKHILPVLGNIKL-SNLTLE 119 Query: 87 KLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADN---PF 143 K+ + + +LLT + K N V T+ L ++ F + Y+ + F Sbjct: 120 KIEKYQHDLLT---VNKQNGEV----LKNSTLELIQKELKSLLAFAYEKSYIKNMHILSF 172 Query: 144 KGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDL 203 K + + ES+ D EEF + I+ + L+ V + G+R GE AL W DID Sbjct: 173 KKVINIDESKKEVDFWQPEEFYKFIEVVDDIVYLTLFNVLYWCGLRIGEALALNWNDIDF 232 Query: 204 KNGTMMIRRNLA--KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHF 261 T+ I ++ + K R T PKTQ + R + + DA+ + H Sbjct: 233 NKKTIRINKSYSDYKHRITNPKTQN-SYRTVIMPDKCFDAVSK------------LFEHD 279 Query: 262 REYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTY 321 ++ + QK F F+ D+I+ D I +A ++ + + RH++ Sbjct: 280 KQIIGFDNQKYIFHFE-----------KPLNQDTIKIRKDRWIAKAHVKRIRIHDLRHSH 328 Query: 322 ACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNT 368 + G + IA ++GH+ MV VYG W N V LN Sbjct: 329 VSLLINLGFSAFDIAKRLGHS-VDMVNNVYGHWFQNAQNKMVDKLNN 374 >UniRef50_C7H2F1 Prophage LambdaCh01, site-specific recombinase, phage integrase family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2F1_9FIRM Length = 475 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 59/267 (22%), Positives = 103/267 (38%), Gaps = 16/267 (5%) Query: 113 RSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACR 172 + TV +Y L++VF V G + +NP K K L ++ RL++A + Sbjct: 209 LNGNTVQHYHRMLSSVFTKAVQWGLVPENPCKRAEAPKAEEIDVQALEEKDVARLLEALQ 268 Query: 173 NQ--QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK-----DRFTVPKTQ 225 + Q + ++++TG R E+C L W D+DL GT+ I RN+ FT PKT+ Sbjct: 269 DAPAQFSVITQLALFTGARRSEICGLRWCDVDLDAGTLSIERNVQYIPGKGTVFTTPKTK 328 Query: 226 AGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK-QKCTFVFQPEVSARV 284 + R I + + LR R + + R K + +F Sbjct: 329 R-SRRCIKIGPECVQLLREYRQHQRAERLRMGTAWVRRVEIAGKMVENDLLF-------T 380 Query: 285 KNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADA 344 K G ++ + + L + RHT A + A ++ ++GHA Sbjct: 381 KWNGAPIDPKTVTTWFPGFLAAHDLPPVHFHSLRHTNASLLIAAHVPVTAVSGRLGHAKT 440 Query: 345 QMVFQVYGKWMSENNNAQVALLNTQLS 371 +Y ++ + A L + Sbjct: 441 STTTDIYAGFIRSADAAASDALTDVFT 467 >UniRef50_C6MS46 Integrase family protein n=1 Tax=Geobacter sp. M18 RepID=C6MS46_9DELT Length = 356 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 83/368 (22%), Positives = 146/368 (39%), Gaps = 54/368 (14%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEARQ--DLTIKELAEKFLALKETEVAKTSLNTYRAV 66 + KT +A+Q ++ + + R+ T+ E+ +K++ S +T Sbjct: 32 FERKTDAKKWAQQTEAAIREGRHFKTREAKKHTVAEMVDKYVKTVLPT-KPKSKDTQEGQ 90 Query: 67 IKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLN 126 + IG LA + + E R +LL G RS T YM L+ Sbjct: 91 LLWWKDEIGLYTLAD-VTPAMIGECRDKLLAG-------KTKGGGLRSPATTVRYMAALS 142 Query: 127 AVFQFGV-DNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACR---NQQAKNLWCV 182 F V + G++ D+P + + KE R L+ +E RL++A + N + + Sbjct: 143 HAFSVAVNEWGWVEDSPMRKVKKPKEPRGRVRFLTDDERNRLLEAAKRSCNNCLYPVVLL 202 Query: 183 SVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDAL 242 ++ TG+R E+ L W+DIDLK +++ T+ G R + ++ A L Sbjct: 203 ALSTGMRFSEIMNLKWKDIDLKRKCLILH-----------DTKNGERRNVPVVNLAHSVL 251 Query: 243 RSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDA 302 + + RL E VF D ++R+ W A Sbjct: 252 TERSKVRRLGTE-------------------LVFPS--------ISDPTMPSNLRKSWAA 284 Query: 303 AIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQ 362 A++ A L + + RH+ A + GA A IA +GH MV + Y ++ + Sbjct: 285 AVRDANLEDFRFHDLRHSAASYLAMNGATLAEIAEVLGHKTLAMV-KRYAHLSEQHTSRV 343 Query: 363 VALLNTQL 370 VA +N ++ Sbjct: 344 VASMNEKI 351 >UniRef50_B2THD3 Site-specific recombinase, phage integrase family n=3 Tax=Clostridium RepID=B2THD3_CLOBB Length = 384 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 67/356 (18%), Positives = 138/356 (38%), Gaps = 28/356 (7%) Query: 25 SRNLEKFGEARQDLTIKELAEKFL-ALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSI 83 ++ ++ K+ K+ K V+ + N Y I ++ I Sbjct: 49 KKHKGYIALTNSNILFKDYINKWFNEYKVLNVSINTKNDYIYRIN--------AHVVPMI 100 Query: 84 NKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPF 143 KL E+ ++ + N ++++ G V+ +N ++ + + D P Sbjct: 101 GNYKLSELSTSIIQDF----YNKLISEKGMKPVSAKKVYDIVNGCLKYAKKSKLIYDLPT 156 Query: 144 KGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDL 203 I K + + +++E +D + + + V TG+R GELC L W D++L Sbjct: 157 D-IEKQKLVKPEIEFWTKKEIDFFLDKINDLYLYSPVFLDVLTGLRVGELCGLRWCDVNL 215 Query: 204 KNGTMMIRRNLAKDR------FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHII 257 ++G + + + +DR F+ + ++R I + ID L++ M + E+ Sbjct: 216 ESGYIEVNSQVIQDRINKELIFSSILKTSTSHRNISIPPVLIDFLKA-MKEDNNALENDF 274 Query: 258 DVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKR-AGLRHRKSYQ 316 + RE + + F V+ K ++D I + K L+ + Sbjct: 275 VILSREGLMCNPRNLSMNFTKTVAKYKK------SIDDIEKENKEVPKDYMQLKQISFHG 328 Query: 317 SRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 RHT+A + G N +++++GH D + Y M + + LLN + Sbjct: 329 LRHTHATLLIFNGENIKVVSDRLGHRDISITLNTYTHIMDDMKSNTATLLNNLFKK 384 >UniRef50_A2V4W2 Phage integrase n=5 Tax=Gammaproteobacteria RepID=A2V4W2_SHEPU Length = 388 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 72/370 (19%), Positives = 151/370 (40%), Gaps = 43/370 (11%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEA-------RQDLTIKELAEKFLALKETEVAKTSLN 61 I G F Y FP S+ + +F + R+ + A ++ K+ + N Sbjct: 48 AEIDLGCFQYRDYFPKSKKVTQFEQLQREKHPDREYPFFNDFAYQWFERKKATWKNSYRN 107 Query: 62 TYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 T + V+ K ++ G L + I ++ R++L+ + + S +NN Sbjct: 108 TMQNVLDKYLIPQFGN-TLMNEITLSQVDFYRQQLMQMVKADNTRQ------LSNRRINN 160 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 + + ++ + Y + P + LKE + P++ +E + + K+ + Sbjct: 161 LLWPIVSMVSLAAE-EYKFEYPLRRYRSLKEEKAESHPMTIKEVKLFLSHV-PPEWKDYF 218 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAID 240 + +TG+R E+ L W+ +D + + IR+N KT + R + + D Sbjct: 219 IIRFWTGMRSCEIHGLEWQHVDFNHRLIRIRQNWVNGEVCDVKT-PKSRRDLKMCDTVYD 277 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 A + L + FVF + A + T +++W Sbjct: 278 AFKRIKNL-------------------ALSESGFVFTGKSDAPLD------THFVSKKLW 312 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 + +AGL+ R++Y++RHT A + A NP +I+ +GH+D +++F VY +++ + Sbjct: 313 YPTLIKAGLKRRRAYETRHTAAVLHIAALENPLYISQMLGHSDTRLLFDVYAPYVANASR 372 Query: 361 AQVALLNTQL 370 + + + Sbjct: 373 SDGNAFDKLM 382 >UniRef50_A7VVX9 Putative uncharacterized protein n=2 Tax=Clostridium leptum DSM 753 RepID=A7VVX9_9CLOT Length = 419 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 79/350 (22%), Positives = 142/350 (40%), Gaps = 26/350 (7%) Query: 34 ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 + Q T KE +L +K+ V+ T ++ I IG+ + S I + + Sbjct: 85 SAQRDTFKEWGNHWLKIKKAIVSSAHYKTCEQKLRIINCYIGDMPI-SQIKTANVQNII- 142 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES- 152 + + N +P + T+ Y + VFQ ++N + NP + + Sbjct: 143 -----FDLSSLNRWTGKPT-AKRTLVEYRSVCRQVFQLAIENRIIDYNPASSVKIVSNQL 196 Query: 153 RTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 + LS EE +I+ Q + + ++ G+R GE+ L W DID + GT+ + + Sbjct: 197 KKERRALSVEEQGWIINTPHRAQKAAM--IMMFAGLRRGEVIPLTWNDIDFEAGTIRVNK 254 Query: 213 NLAKD--RFTVP---KTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRT 267 ++ K+ RF + KT++G NRV+++ + ID L+ Q T L DV E Sbjct: 255 SVFKEGTRFNIKSGAKTESG-NRVVNIPQILIDFLKLQPKDTILVCPDTKDVMMTE---- 309 Query: 268 EKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLT 327 ++ + YGD ++ R +D + + RHT+ Sbjct: 310 --TSWRRMWDSYIKDLNIKYGD---LNGKRSKYDPKGVPITIPRITPHWLRHTFCTLLYL 364 Query: 328 AGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTM 377 +G + QMGH+D + +Y E+ V+ LN + A M Sbjct: 365 SGTDVLTAKEQMGHSDIKTTLGIYTHLDKEHKRNAVSKLNEYIETHASHM 414 >UniRef50_C0X6I8 Phage integrase family site specific recombinase n=17 Tax=Enterococcus faecalis RepID=C0X6I8_ENTFA Length = 389 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 121/345 (35%), Gaps = 32/345 (9%) Query: 34 ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 A DL + +L + + +VA + Y+ + N + +++ Sbjct: 67 ANPDLLFYDYLLNYLEVSKKQVAFNTYVGYKHYVHNRIYKFFYPK-----------KIKL 115 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 L Y + + +A TV +Y + Q V ++ N + K+ + Sbjct: 116 NRLKPYHLQDFYQYMLNDDCTANTVIHYHAFIRKALQEAVITELISTNVADKVRKPKKKQ 175 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 + ++ E ++L+D ++ + ++ + G+R E+ L W ID N ++I Sbjct: 176 FVSQVYNQHEILKLLDILSEEKLYLVVLLTAFYGLRRSEVLGLKWSAIDFFNKKIVINHV 235 Query: 214 LAKDR------FTVPKTQ-AGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 + ++ +T+ + + R + L++ AL +Q + ++ + D Sbjct: 236 IIENPENMSQLIKKDQTKNSSSYRTLPLVETIERALVNQAKWQQDNRILLGD-------- 287 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL 326 ++ + G + IK+ GL+ + + RH+ A L Sbjct: 288 ------DYILEDNEYVFTMEDGRLMKPQYVTHRLSKLIKKNGLKKIRFHDLRHSNASIML 341 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 +G N I +GHA +Y + + L Sbjct: 342 DSGQNMKSIQEWLGHASYSTTANLYTHLTAGVKDRAAEALENAFG 386 >UniRef50_A6GBT9 Phage integrase n=2 Tax=Plesiocystis pacifica SIR-1 RepID=A6GBT9_9DELT Length = 531 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 69/342 (20%), Positives = 140/342 (40%), Gaps = 23/342 (6%) Query: 33 EARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVR 92 +D+ ++ +F+A E+ VA + N I E++L+ + L + Sbjct: 157 RQEEDVIFEDFVPRFMAFCESPVAGRRGANSTGELSNKRGTI-EQHLSPYFGEMPLRRIG 215 Query: 93 KELLTGYQIPKSNYIVTQPG--RSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK 150 + Y K+ + G SA T+ N++ L + + + P I P + Sbjct: 216 ARQVDAYVCAKAQERSKRTGKPLSASTIANHLAVLRRMLKVAHRWELIDRVP--DIQPPR 273 Query: 151 ESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 + T+ + LS+ E L++ + ++L+ +++ TG+R GEL L D+DL NG + + Sbjct: 274 KG-TVDNYLSKREAQALLEHA-DPLTRDLFMLALRTGMRLGELRELRTGDVDLANGRIQV 331 Query: 211 RRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQ 270 RR ++ P + G R + + A++ LR L L ++ ++ + Y + Sbjct: 332 RRQRTQEGEVTPP-KYGRKRTVQVPADALEVLR--KRLAGLGRKELVFSKPKGYKAAHR- 387 Query: 271 KCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRH-RKSYQSRHTYACWSLTAG 329 R G+ ++ + + A AG+ + RHT+A ++ AG Sbjct: 388 ----------GERAAKGGEPWSHKDLFNAVNRARAGAGIERSVGVHTLRHTFATHAVAAG 437 Query: 330 ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + ++ Q+GH+D + + Y E L+ Sbjct: 438 VPLSLVSRQLGHSDVRTTMR-YAHHAPELTPGIFDRLSEPAG 478 >UniRef50_Q1ISL4 Phage integrase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ISL4_ACIBL Length = 454 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 61/341 (17%), Positives = 124/341 (36%), Gaps = 52/341 (15%) Query: 33 EARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEV 91 + + +T+ EL ++ + + + + Y+ +++ +IL G++ + S I +E + Sbjct: 148 KPKTAMTVSELHRRWENAELPTIKRNTAGYYQKILRCHILPTFGQREIGS-ITREDVQTF 206 Query: 92 RKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE 151 Y S T+ +L + + V+ +L NP + Sbjct: 207 LASQAGKY--------------SRNTLRGMRVSLGRILTWAVNCAWLEKNPCSKVPLPHV 252 Query: 152 SRTIPD--PLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMM 209 + L E+ + D + + L + TG+R GE + W D D + Sbjct: 253 EKGEIQRSILMTEQVTAIADKL-EEPYRTLVLLLAVTGLRIGEAIGIKWSDFD--GDILH 309 Query: 210 IRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 + R + + KT A +NR + + I +R Sbjct: 310 VSRTIYDGKADSTKT-ASSNRKLPIPAALISRMRM------------------------L 344 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG 329 F+F + V +++++ A K G+R + RHT A L +G Sbjct: 345 GDGEFIFHSRAGSPVNPG------NALKRYLRPAAKALGIRLTGWHDFRHTQATQLLRSG 398 Query: 330 ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 ++P ++ +GH+D + VY +E A + + QL Sbjct: 399 SSPKVVSGILGHSDVGITLNVYEHTETEIFRAPLERIADQL 439 >UniRef50_A1K6M5 Site-specific recombinase, phage integrase family n=1 Tax=Azoarcus sp. BH72 RepID=A1K6M5_AZOSB Length = 358 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 88/374 (23%), Positives = 142/374 (37%), Gaps = 59/374 (15%) Query: 9 YAIKTGVFD-------YAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLN 61 Y +T FD +A Q ++ K + T+ ELAEK+ + S Sbjct: 24 YPAETATFDRLSDARTWAAQTETAIKAGKHFGVAKRRTLHELAEKYEQAVADSLK--SFE 81 Query: 62 TYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 R + G LA +V L+ ++ + + S TVN Y Sbjct: 82 ARRGHLAYWRQAFGSSALA---------DVSPALIAEHRDRLTKRTTERGTVSLATVNRY 132 Query: 122 MTNLNAVFQFGVDN-GYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 + L+A+F F V ++ NP + + ES LS +E L+ ACR + L+ Sbjct: 133 IATLSALFTFAVKELQWVEANPVERVRKFGESPGRVRYLSDQERAALLTACRESRNPYLY 192 Query: 181 ---CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKP 237 +++ TG R E+ L W+ +D T+++R +T+ G RV+ L Sbjct: 193 PAVVLALSTGARQAEITTLRWQQVDFARRTIVLREG---------ETKNGAGRVLPLTGE 243 Query: 238 AIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIR 297 A+D L R+ + + VF + R N SI+ Sbjct: 244 ALDLL-------------------RDLAKVRDIRDDRVFPVASTTRAFN--------SIK 276 Query: 298 QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 WD A+KRAG+ + + RHT A + AG +A +GH QM + Y E Sbjct: 277 GAWDGAVKRAGISDFRWHDLRHTAASYLTMAGIGSMEVAKVLGHKTLQMTAR-YSHLSPE 335 Query: 358 NNNAQVALLNTQLS 371 +L +L Sbjct: 336 RTVELGDVLTKRLG 349 >UniRef50_Q38Y39 Site-specific recombinase, prophage lsa1 integrase n=3 Tax=Lactobacillus RepID=Q38Y39_LACSS Length = 385 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 136/357 (38%), Gaps = 40/357 (11%) Query: 27 NLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINK 85 + + + +LT +++ +++ A V ++++ + V +IL G+ + + Sbjct: 56 DSGQLDQQPINLTFEDVYQQWWAGYINTVRESTMYKQKKVFQNHILPAFGKYRIRTITTS 115 Query: 86 EKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKG 145 + + K K + T +A+F++ + GY+ DNP Sbjct: 116 QVQTTLNKWFKQTDYSFKPWFNYT----------------SAIFKYAILQGYIKDNPCTR 159 Query: 146 ISPLKE--SRTIPDPLSREEFIRL---IDACRNQQAKNLWCVSVYTGVRPGELCALGWED 200 ++ K+ + +++ ID + + L+ V +TG+R GE +L W+D Sbjct: 160 VTMPKKLDKEDTLNFWDKDQLKTFFNGIDPVNDLEKYTLFRVLAFTGIRRGECLSLTWDD 219 Query: 201 IDLKNGTMMIRRNLAKDR-----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEH 255 ++++ T+ I + L KT+ GT RVI L + + L+ R Sbjct: 220 LNVQKATLDINKTLTHGDKGRLLIQPTKTKKGT-RVISLDESTLLYLKKWHLEQRR---- 274 Query: 256 IIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKR-AGLRHRKS 314 + G + +F + +R + D A K A L Sbjct: 275 ----MYLMLGYNINKSNQLIFATSKNTFKSLNT---PSKWLRALIDDANKSGANLPSITV 327 Query: 315 YQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + RH++A +AGA+ + ++GH DAQ +Y + V L L+ Sbjct: 328 HGFRHSHASALFSAGASIKEVQERLGHEDAQTTLNIYTHVTEKQGQEAVQKLVNFLN 384 >UniRef50_A5ZQX5 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZQX5_9FIRM Length = 407 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 68/350 (19%), Positives = 136/350 (38%), Gaps = 40/350 (11%) Query: 37 DLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 +LT+ E F++ K+ + ++ Y++ KN ++ S++ K+ E+++ Sbjct: 69 NLTLNEFFRLFMSTKK-NIRDSTRCNYKSYWKNAIAP-------SALGIMKISEIKQ--- 117 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISP-LKESRTI 155 + + + + G S T+ Y L+ Q VD+ + NP KG + + + Sbjct: 118 --IHVKRLYADLLEKGYSPGTIRAYHIILSECLQAAVDSDMIRKNPAKGSRKGIDKEVSR 175 Query: 156 PDPLSREEFIRLIDACRNQQ----AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 L+ EE +++ +N L ++ TG+R GEL L W+DIDL+ + +R Sbjct: 176 KRALTIEEQETMLEFTKNSNSYKIHYPLIVFALSTGLRVGELGGLLWDDIDLEKNMIHVR 235 Query: 212 RNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 R L GT H+ +A + LT+ +K+ ++ + ++ K Sbjct: 236 RQLVYRNLD------GTGCKFHIQPLKTEAGERDIPLTKTAKKALMKQREYDLLLGKRAK 289 Query: 272 CTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAG----------------LRHRKSY 315 V + + + G+ + IK L H ++ Sbjct: 290 EQPVAGLKNFVFLNHQGNQLAPQVLDSALRNIIKAYNKKELKQADKEHGEPFLLPHISAH 349 Query: 316 QSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVAL 365 RHT+ + +G + + MGHAD M + Y +++ Sbjct: 350 ILRHTFCTRAAESGVDVKSLQYIMGHADITMTMERYNHVDEVRVQNEMSK 399 >UniRef50_A2RHC7 Phage integrase n=3 Tax=root RepID=A2RHC7_LACLM Length = 394 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 121/345 (35%), Gaps = 33/345 (9%) Query: 40 IKELAEKFLALKETEVAKTSLNTYRAVIKNI-LSIIGEKNLASSINKEKLLEVRKELLTG 98 K++A + + V ++ + + N L +GE + +N L ++ + + Sbjct: 69 FKDIAMLWFDSYKLGVKPRTVQIMQTRLNNYVLPALGEYRI-DKVNSIILQQIVNQWMIN 127 Query: 99 YQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES----RT 154 P N +P Y + +F+ + G + DNP + K Sbjct: 128 ASQP-LNGAYHRPKGKGKDFKIYFNIVERIFKHALSLGLVKDNPCVNVIVPKVRLESTEK 186 Query: 155 IPDPLSREEFIRLIDAC--------RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNG 206 L+ E+ + N+ L + V +G+R GE AL W DID K G Sbjct: 187 KVKYLTAEQLKIFFEYIGALPKEKYTNELMTGLCRLLVASGLRIGEAVALSWSDIDFKTG 246 Query: 207 TMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 ++ + + + +NR++ + A++ L+ E +F G+ Sbjct: 247 SVSVSKTTLRAVIQSTPKTDKSNRIVLIDSKAVEVLKHW--------ELFQAKYFMSIGK 298 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL 326 +++ VF G ++R ++ L + RH++A L Sbjct: 299 GKQE---LVFPNRT-------GGVLDYQTMRPFLIKWLRACQLPQVGFHGFRHSHASLLL 348 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 A I ++GHA +M Y S+N V + + Sbjct: 349 NADVPYKEIQERLGHASIKMTMDTYSHLESDNKIKAVERFESIAN 393 >UniRef50_C7T893 Phage integrase n=5 Tax=Lactobacillus RepID=C7T893_LACRG Length = 385 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 130/352 (36%), Gaps = 46/352 (13%) Query: 33 EARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEV 91 E + + +++ E++ V +++ + +IL G K +A+ K +V Sbjct: 64 EKPKPVFFRDVYEEWYGNYINTVRESTWARTAGMFNNHILPAFGGKRIATITTK----DV 119 Query: 92 RKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE 151 +K + ++ +NY + +++V + V GY++ NP K + Sbjct: 120 QKAVKRWFEFTSANY------------KRWYNYVSSVMDYAVRQGYMSKNPAKAVVLPHH 167 Query: 152 SR----TIPDPLSREEFIRLIDACRNQQAKN---LWCVSVYTGVRPGELCALGWEDIDLK 204 + ++E+ + + ++ V +TGVR GEL AL W D+ K Sbjct: 168 DDLAGDKPENFWTKEQMNHFFACIDQENHFDVFIMFRVLAFTGVRRGELLALTWNDVSFK 227 Query: 205 NGTMMIRRNLAKDR-----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDV 259 ++ + + L + PKT+AG R I + + L+ + + + Sbjct: 228 ENSIKVNKTLTQGDKGHQIVQAPKTRAG-RRTIPVDGQTMAYLKRWRRIQQET------- 279 Query: 260 HFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGL-RHRKSYQSR 318 F + G Q +F + + ++++ + GL + R Sbjct: 280 -FLQLGINTMQPNQLLFTNTKNG-------YQSLNTPSKRLHKLQDDNGLTPRITIHGFR 331 Query: 319 HTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 H++ L AG + +GH D + VY ++ + A L + Sbjct: 332 HSFISNLLIAGVPVTSVQKLVGHTDPTITLGVYAHVSAKQESEATAALAKYM 383 >UniRef50_UPI0001BCC5A1 phage integrase n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCC5A1 Length = 416 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 78/357 (21%), Positives = 126/357 (35%), Gaps = 53/357 (14%) Query: 26 RNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSIN 84 R E +T+ E AE +LA V ++ +Y ++++ ++L G L S Sbjct: 49 RRGEWVDPEMSRITVSEWAETWLAT--LVVKPKTMESYESLLRCHVLPRWGAVRLESV-- 104 Query: 85 KEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADN--- 141 L SA L + V++G LA N Sbjct: 105 ---------ALADVKAWVAGMRQQNGRPLSASRTKQAYQVLTMMLDLAVEDGRLARNSAK 155 Query: 142 PFKGIS----PLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALG 197 P G S P + L+ + L A + + L YTG+R GE AL Sbjct: 156 PASGRSRSMVPPVQRDRAKKYLTPRQLEALAGAAGD--GRVLILTLGYTGLRWGEASALR 213 Query: 198 WEDIDLKNGTMMIRRNLA--KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEH 255 D+DL + +RR+++ + T++ R + + K L + + Sbjct: 214 VSDVDLLGRRIHVRRSISEVRGSLVFGTTKSHATRTVPITKSLAVELEALIDGRG----- 268 Query: 256 IIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM-WDAAIKRAGLRHRKS 314 P+ G + + R+ +D A+ RAGL H Sbjct: 269 ----------------------PDDPLFAAPGGGWLHLRNFRRRDFDPAVARAGLPHITP 306 Query: 315 YQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + RHT A +++AGAN + +GHA A M VY E+ +A L T S Sbjct: 307 HGLRHTAASIAVSAGANVKAVQKMLGHASAAMTLDVYADLFDEDMDALAERLETTAS 363 >UniRef50_B0ABY5 Putative uncharacterized protein n=3 Tax=Clostridium RepID=B0ABY5_9CLOT Length = 370 Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 127/341 (37%), Gaps = 37/341 (10%) Query: 34 ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 A D+ +++ FL + ++ T+ N Y + K K + + KL +++ Sbjct: 59 APNDMKLEKYLMDFLEKYKPNLSITTYNCYIRICK--------KYINPMLGNIKLNDLKP 110 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 + Y S T+ ++ LN + + + I K + Sbjct: 111 IHIQNYVDDLVGI------LSPQTIKIHINILNLALKRAYKLKLVKYDIVDCIEVPKNKK 164 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 + +++ +L++ +N + +++ G+R E+ L W DID T+ I + Sbjct: 165 FKSEVYDQKDIAKLLETIKNTDLELPINLAIGLGLRISEVLGLSWSDIDFTENTITIEKI 224 Query: 214 LAKDRFTV----PKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 A+D V PKT + R I K + L+ + ++ + + Sbjct: 225 TARDSGKVILKEPKTDT-SKRTISAPKEVMAMLKDYKR-----------KYLQDKLQGKI 272 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG 329 + C +F + + D + + + +K+ L+H + + RH++ + A Sbjct: 273 KDCNLLF-------LDKNENPIAEDVLSKKFSRFLKKHNLKHIRFHDLRHSHVTLLINAK 325 Query: 330 ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 I+ ++GH++ +Y + E + ++ + Sbjct: 326 VPIKVISERVGHSNVNTTLNIYSHTLKEMDQEASEKISESI 366 >UniRef50_C5WGZ4 Integrase n=18 Tax=root RepID=C5WGZ4_STRDG Length = 362 Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 63/355 (17%), Positives = 124/355 (34%), Gaps = 58/355 (16%) Query: 29 EKFGEARQDLTIKELAEKFLALKETEVAKTSL-NTYRAVIKNILSIIGEKNLASSINKEK 87 + + + +T L +++L E V ++ T R + K+IL + +K K Sbjct: 51 AELDKPKSSMTFGALTDQWLKEYEKTVQGSTYLKTERNINKHILPKL---------DKVK 101 Query: 88 LLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS 147 + ++ L+ N + + + + V GY+ +NP I+ Sbjct: 102 IGDINPLLIQRLTEEWCNDLKYGG--------KILGLVRNILNLAVRYGYINNNPALPIT 153 Query: 148 PLKESRTIP---DPLSREEFIRLIDACR---NQQAKNLWCVSVYTGVRPGELCALGWEDI 201 P K R + + ++ + ++ N + L+ + +TG+R GEL AL W+D+ Sbjct: 154 PPKIKRKRKMNNNFYTLDQLKQFLELVEKTDNIEKIALFRLLAFTGIRKGELLALTWDDL 213 Query: 202 DLKNGTMMIRRNLAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHII 257 + T+ I + + + V KT+ ++R+I L ++ L Sbjct: 214 N--GNTLSINKAVTRTQVGLEIDVTKTK-SSDRLISLDDETLEILLELRE---------- 260 Query: 258 DVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQS 317 F G T R+ IK L + Sbjct: 261 -----------------TFPTSTLMFQSESGGIMTPSLPRKWLLQIIKGTDLPQITIHGF 303 Query: 318 RHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 RHT+A +G + + +++GH D Q VY + N ++ Sbjct: 304 RHTHASLLFESGLSLKQVQHRLGHGDLQTTMNVYTHITQSAIDDIGTKFNEFVTN 358 >UniRef50_C7XQF9 Phage integrase n=1 Tax=Fusobacterium sp. 3_1_36A2 RepID=C7XQF9_9FUSO Length = 351 Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 72/337 (21%), Positives = 139/337 (41%), Gaps = 49/337 (14%) Query: 37 DLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 ++T K L + ++ + KT++ T ++ + EK I + + + +LL Sbjct: 59 EMTFKSLYSLYHNDMKSRIKKTTMETKEYIVNTKILPFFEKMKVKDIKPIHIRKWQTDLL 118 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPL-KESRTI 155 + S + L A+F + + L NP + K+ Sbjct: 119 -------------KMEYSKTYLKTIYNQLTAIFNYAIRFHNLDKNPCHIAGSIGKKDADE 165 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 LS +EF ++ID +++ K + + +TG+R GEL AL +ED+D +N T+ I +N Sbjct: 166 MQILSLQEFNKMIDCVTDKENKFFYIILFWTGMRKGELLALTYEDVDFENKTITINKNFQ 225 Query: 216 ---KDR-FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 K+R T PKT G RVI + ++ ++ + + K Sbjct: 226 IVKKERLITDPKTPRG-RRVIAVNDVVLNCIKD---------------LWNTSYKPNKTD 269 Query: 272 CTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGAN 331 F + + DS+++ D A K+AG+ + + RH++A + L+ G N Sbjct: 270 KIF---------------YLSKDSLKRQLDTACKKAGVPRIRVHDLRHSHASYLLSNGVN 314 Query: 332 PAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNT 368 ++ ++GH Q +Y + + +LN+ Sbjct: 315 IVILSRRLGHEKVQTTLNIYCHICPSSEDRLNDVLNS 351 >UniRef50_B2TMD1 Prophage LambdaBa04, site-specific recombinase, phage integrase family n=3 Tax=Clostridium RepID=B2TMD1_CLOBB Length = 386 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 125/347 (36%), Gaps = 31/347 (8%) Query: 35 RQDLTIKELAEKFLALK-ETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 +++ +K+ + +L + ++ + Y+ + ++ +L ++ Sbjct: 56 PKEILLKDYLKIWLEDYVKPNNSENTYIKYKGTVNKYINP-------------QLGLIKL 102 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 L I + + + S T+ + LN + L DNP K + K S+ Sbjct: 103 CDLKVINIEQFLSKLKKTKLSLTTIQKHYLVLNGALNKAIKLQMLNDNPCKYVDTPKRSK 162 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWC-----VSVYTGVRPGELCALGWEDIDLKNGTM 208 L+ EE + + ++ +++ TG+R GE+C L W DID N + Sbjct: 163 YKASILTFEELHSIYTNLNTKIYEDYIMKLGMDLTIETGLRRGEMCGLQWSDIDFDNKIL 222 Query: 209 MIRRNLAK---DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSK-EHIIDVHFREY 264 + L + D + R + L I L+S + ++K ++ + + Sbjct: 223 NVNTALIRVNNDYKISNLKTDSSYRKLPLSNEIIKILKSHKSKQNINKIKYGNNFVYSNK 282 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGL-RHRKSYQSRHTYAC 323 + + +F E G + + Q K + ++ + + RH+ A Sbjct: 283 FDGDSTEYNLIFTWE-------NGRYIIPSNFLQRLKRLCKYCKIEKNIRWHDLRHSNAT 335 Query: 324 WSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 L + I ++GH+ Q +Y E N +++ L Sbjct: 336 ILLKNKISMKVIQERLGHSLMQTTSDIYAHVTEEMNREATDVISNVL 382 >UniRef50_B6FRP3 Putative uncharacterized protein n=4 Tax=Bacteria RepID=B6FRP3_9CLOT Length = 387 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 80/380 (21%), Positives = 147/380 (38%), Gaps = 44/380 (11%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 R ++ + + + + +++T+ E + +L+ + ++ +Y Sbjct: 40 RQTIYAKT-LNEVRHKLRTEQYNDEKAINVVDKNMTLDEWFDIWLSTCKKNCRSSTKGSY 98 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 K I +G + L S +N + E +L T S I+ Sbjct: 99 ITHYKRIQEELGWRKLTS-LNLIVMQEAFNKLKTDNARKNSKKILVD------------- 144 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPL--KESRTIPDPLSREEFIRLIDACRNQQAKNLWC 181 + VD L N K I+ + KE + L+ E ++ + +NL+ Sbjct: 145 ----MLNRAVDTDLLVKNVAKQINTVIAKEEKKERRVLTIRETELFLEQAKGTFYENLFI 200 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL---AKDRFTV-----PKTQAGTNRVIH 233 +++ TG+R GEL AL WEDID K + ++ L +K+ V KT G R I Sbjct: 201 LALETGLRVGELSALQWEDIDFKKKVIHVKHTLCYFSKNGKYVFEMHDTKTNNGK-RTIP 259 Query: 234 LIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV 293 L AI++L+ Q +L K+ II + + E Q FV + F + Sbjct: 260 LTAKAINSLKCQ----KLQKQEIILKG--KTAKEEFQNLVFVTKNNQPT------QQFLI 307 Query: 294 DSIRQMWDAAIKRAGLRH--RKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 + Q+ + +AG+ + RHT+A ++ G NP + +GH QM +Y Sbjct: 308 NQCMQLVIQNMNKAGIDFSPFTLHTLRHTFATRAIECGMNPKTLQKLLGHGTLQMTMDLY 367 Query: 352 GKWMSENNNAQVALLNTQLS 371 + ++ + S Sbjct: 368 CHVTEDTLFLEMEKFEKRCS 387 >UniRef50_D2BLD3 Phage integrase n=4 Tax=root RepID=D2BLD3_LACLK Length = 399 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 72/385 (18%), Positives = 133/385 (34%), Gaps = 35/385 (9%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDL-TIKELAEKFLALKETEVAKTSL 60 ++++ + KTGV + ++ + + ++ L T E+AE F L + + S+ Sbjct: 34 QIKTDIRGRTKTGVKNELERLKNEFKKNGNTKGKESLETFGEVAESFFELYKLQQKVGSI 93 Query: 61 NTYRAVIKNI-LSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 R+ + + G K + S I + + E P G S Sbjct: 94 RQMRSNLDTYAIPAFGNKRI-SKITTAHIQKQVIEWAKNAAEPLGGKQKRDVG-SGKDYK 151 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLK----ESRTIPDPLSREEFIRLIDACRN-- 173 + +N +FQ + G + NP + K + ++ E L + Sbjct: 152 LQLNVINRIFQHALSLGIIDRNPCHSVIIPKVKIDKPNKEVKFYTKTELSELFSHIESLD 211 Query: 174 ------QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN-LAKDRFTVPKTQA 226 Q L + V +G+R GE AL W D+DL N T+ + + + + Sbjct: 212 NTKWSTQYFNALIRLLVASGLRIGEAMALEWFDVDLDNQTVSVSKTTVQRTVIQDTPKTN 271 Query: 227 GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKN 286 +NRVI + A+ L+ + + + H + VF Sbjct: 272 KSNRVISIDSKAVSTLKRWYFFQKKHFMSLGNPHQ-----------SLVFPTWQ------ 314 Query: 287 YGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 G+ + A L + RH++A L AG I ++GH+ QM Sbjct: 315 -GNVMDYHGLNYRLKKIEDAAKLTSLSFHGFRHSHASLCLNAGMTYKVIQERLGHSTLQM 373 Query: 347 VFQVYGKWMSENNNAQVALLNTQLS 371 +Y E N ++ L + Sbjct: 374 TMDLYSHLEPEKKNKELELFTKYAN 398 >UniRef50_A5TWD8 Possible integrase n=3 Tax=Fusobacterium RepID=A5TWD8_FUSNP Length = 353 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 71/355 (20%), Positives = 138/355 (38%), Gaps = 52/355 (14%) Query: 19 AKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKN 78 + + + ++ K + L K+ + + + ++ +I + Sbjct: 41 KEALEYEKKVILDNSLGSNIPFKVAVNQHLEFKKLRIKELTYMNMSNILNSITYF--DNL 98 Query: 79 LASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYL 138 L S I ++ + +LL Y G S T+N Y+ L F + V L Sbjct: 99 LISDITPIQISNFQNDLLRKY-----------KGSSIRTINAYVKML---FTWCVRYKNL 144 Query: 139 ADNPFKGISPLK-ESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALG 197 NPF + LK E++ D ++ +EF ++++ N K ++ + +TG+R GE AL Sbjct: 145 TSNPFDMVDRLKLETKKRMDIITVDEFNQIVEQVNNPDMKLMFKLLFWTGLRIGEARALK 204 Query: 198 WEDIDLKNGTMMIRRNLA----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSK 253 +DID N T+ + ++ K T PKT+ G+ RVI + + ++ + + Sbjct: 205 IDDIDFNNKTISVTKSYTNLSGKSIITTPKTK-GSIRVIKIDDVLLSEIKDYIDKAKYI- 262 Query: 254 EHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRK 313 F+F F S R + A + R + Sbjct: 263 ----------------LDDNFIF-------------RFNKASYRYNFKNATIKVLGRDLR 293 Query: 314 SYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNT 368 + RH++A + + G + I+ ++GH++ M VY + N + L+N Sbjct: 294 VHDLRHSHASFLINNGVDILLISKRLGHSNTAMTLNVYSHLYPDRENEAINLINK 348 >UniRef50_UPI0001C37C1F integrase family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37C1F Length = 399 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 123/330 (37%), Gaps = 12/330 (3%) Query: 40 IKELAEKFLA-LKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTG 98 E +++L + ++ Y +++I I KL + + L Sbjct: 70 FGEYLDQWLEKFGSVAIRNSTRMNYLGYLRHIQRH--------KIKDIKLKNLTVDDLQE 121 Query: 99 YQIPKSNYIVTQPGR--SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP 156 + + N G SA T++N M ++ V + N + K Sbjct: 122 FILFLKNAGQLDTGLPLSAKTLHNIMNMIHKALDHAVGRQLIYHNAADYVQLPKVMTPEM 181 Query: 157 DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK 216 L+ E + A + + + ++ G+R GE CAL +D+ K+G + + + Sbjct: 182 RVLTETEISGFVAAMEGDRLQIALVLMLFCGLRLGECCALTHDDVRCKDGIYYLNISKSL 241 Query: 217 DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVF 276 +R + + +AG + I ++ + + + L + + ++ + + +K ++ Sbjct: 242 NRVSNFEAKAGEPKTILRLQET-KTSKGKRQVPLLPEVADKVLAHIQWQKEQAEKSYGMY 300 Query: 277 QPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIA 336 + G + ++R+ A + G+ + RHTYA ++ AG +++ Sbjct: 301 EENPWLIANELGHYLDPGTVRKKLKAVAESIGITDFHPHCLRHTYASQAVKAGVPLPYLS 360 Query: 337 NQMGHADAQMVFQVYGKWMSENNNAQVALL 366 + +GH +VY + A + Sbjct: 361 DILGHESTAFTAKVYVSLDLQGRANAQAAM 390 >UniRef50_A0JQA1 Phage integrase n=2 Tax=Lactobacillales RepID=A0JQA1_LACS1 Length = 381 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 67/342 (19%), Positives = 130/342 (38%), Gaps = 45/342 (13%) Query: 36 QDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKE 94 +++T E+ ++++ + V ++S T K IL I+G K IN+ +E + Sbjct: 64 ENITFGEVYDRWIVNYKLTVKESSFYTVELQYKSKILPILGNKK----INQITTIECQDL 119 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRT 154 + Y IP NY + +F++ + D+P + K SR Sbjct: 120 INYWYSIPLKNYKA------------IFNLITRIFKYAKQLKIVTDDPTSSVIIPKASRQ 167 Query: 155 ------IPDPLSREEFIRLIDACRNQQ---AKNLWCVSVYTGVRPGELCALGWEDIDLKN 205 + +R+E ++ + L+ + ++G+R E AL W DID + Sbjct: 168 FNNLEHSRNYYTRDELKTFLEYAEKHEKHKIYVLFRLLAFSGMRKSEALALTWNDIDFEK 227 Query: 206 GTMMIRRNL---AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFR 262 + I + + +K + T PKT+ +NR + + K + LR + Sbjct: 228 AQITINKTIILVSKVKVTTPKTK-SSNRTVFIDKKTVSILREWRLSQKKE--------LL 278 Query: 263 EYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYA 322 + G VF + + + +I +M + + + L H + RHTYA Sbjct: 279 QKGFNALSPNQLVFPDKNNH-------YIIPTTISKMMNRVSEGSNLHHITVHGLRHTYA 331 Query: 323 CWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVA 364 + G + + Q+GH+ ++ VY E Sbjct: 332 TLAAQGGMSVKQLQAQLGHSKVEITLDVYTSITDEQRKDTAN 373 >UniRef50_B5H9T3 TraSA integrase fusion protein n=4 Tax=Streptomyces RepID=B5H9T3_STRPR Length = 372 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 65/346 (18%), Positives = 122/346 (35%), Gaps = 44/346 (12%) Query: 40 IKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGY 99 KE AE++ A++ ++ ++ + EK +I + L Sbjct: 60 FKEYAEEWRAIQPH--RPSTAKAVAQHLRCYVYPAWEKRSLGAIKPGDVQSWVTSL---- 113 Query: 100 QIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPL 159 T G +A T +NAVF+ V + + NP R PL Sbjct: 114 --------TTTHGLAASTSRTVFNTVNAVFRAAVRDRMIPHNPCAEAKLPSVPRKKIVPL 165 Query: 160 SREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK--- 216 + E+ L D + K L + TG+RPGEL L +DL + T+ + + + + Sbjct: 166 AVEQVRTLSDEI-PARYKGLVLLGAATGLRPGELFGLQLRHVDLLHATVSVEQQIQQTAK 224 Query: 217 -DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFV 275 + P A ++R + L + A+DA+++ + ++ Sbjct: 225 HGVYVCPPKTARSHRTVPLPRMAVDAMKAHLRD-----------------FPADGPEGWI 267 Query: 276 FQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRK-SYQSRHTYACWSLTAGANPAF 334 F V + W A +AG+ + RH YA + G + Sbjct: 268 FTAPQGGPV------VYTHFMDGSWRPACAKAGIPKGTGPHALRHHYASLLIRHGESVKT 321 Query: 335 IANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQ-LSEFAPTMPH 379 ++ ++GH +A M +Y ++ A ++ + A P Sbjct: 322 VSERLGHTNAAMTLNIYTHLWPDSEERTRAAVDKAYADQSADAQPQ 367 >UniRef50_UPI0001BCCDB9 integrase family protein n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCCDB9 Length = 344 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 70/346 (20%), Positives = 123/346 (35%), Gaps = 48/346 (13%) Query: 32 GEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLE 90 + + KE +K++ K VAKT+ + + + +L GE+ LA +I + ++ Sbjct: 31 AMKGESIAFKEYGDKYMNDKSRTVAKTTHSKSACLYRVQLLPAFGEQPLA-AITRSQVQG 89 Query: 91 VRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK 150 + S T+ L+++ + + NP K + K Sbjct: 90 FVNAMADHP-------------YSMETIKATKCLLSSIMALAASDQLIPVNPCKAVKLPK 136 Query: 151 ESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 S EEF RL+ A + + G+R GE+ AL WEDID+K + + Sbjct: 137 VEPNKKRAPSMEEFKRLMKASEGHRLWIAIPLLFLAGLRLGEMLALTWEDIDMKERLIHV 196 Query: 211 RRNLAKDR-------FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFRE 263 + + + PKT+AG R I + L+ Sbjct: 197 SKTWSVENGSGKAYLKDSPKTKAG-RRSIPIGDDLYTMLKRY------------------ 237 Query: 264 YGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRH-RKSYQSRHTYA 322 RT + K V P+ A + F +++ A L + RH +A Sbjct: 238 --RTNEGKGKNVVIPKRDADEYTHPQVFR----GKVFKYWCYDADLPKDITPHSGRHYFA 291 Query: 323 CWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNT 368 AG NP + + GH+D + VY ++ + N+ Sbjct: 292 YHLYAAGVNPETLRHITGHSDITTLLDVYCHTDKLSDETMIQARNS 337 >UniRef50_B6BNI8 Phage integrase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNI8_9PROT Length = 347 Score = 177 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 63/336 (18%), Positives = 130/336 (38%), Gaps = 41/336 (12%) Query: 32 GEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEV 91 ++ T+ E + + E S Y+ + + + I K + I ++ Sbjct: 49 TNVKKVPTVDEFMQISFEIHEAYRRPLSQKDYKFIYERHIKPIFGKRIIDEIKPSEIATW 108 Query: 92 RKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE 151 + +LL S ++ + N +F + + +A NP I K Sbjct: 109 QSKLL--------------KKLSTKSLTMILAVFNVMFNDALADELIARNPMSLIKKPKN 154 Query: 152 -SRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 S P ++E +L+ + ++ + ++ + +TG+R GEL AL W DID +N + + Sbjct: 155 ISVNEILPFKQDEIFKLLGHIQ-ERMRAVFAIGFFTGMRTGELVALKWSDIDFENNIIKV 213 Query: 211 RRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQ 270 RR ++ ++PKT++ D + L L + EY Sbjct: 214 RRAKRQNVESLPKTKSSI----------RDIDIIDILLPYLQNHLKFKLDDSEYMFNSLH 263 Query: 271 KCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGA 330 K F +S R W ++ + +R YQ RHT+A ++ G Sbjct: 264 KRPFTCFHSIS---------------RTYWRPIFEKIDIAYRNPYQMRHTFASMMISNGE 308 Query: 331 NPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALL 366 + +++ +GH ++ + +Y +++ + + A L Sbjct: 309 DILWVSKMLGHTNSAITLTMYARYIENKDKKRGAFL 344 >UniRef50_B2V4P6 Phage integrase family protein n=9 Tax=root RepID=B2V4P6_CLOBA Length = 382 Score = 177 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 130/353 (36%), Gaps = 41/353 (11%) Query: 37 DLTIKELAEKFLALKE-TEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 +++ + + + + TY++ I NL ++ K+ ++ Sbjct: 61 NMSFSDFLDYWFDEYVMKNCKYNTQQTYKSFIN--------INLKPNLGIYKIKQLNYAA 112 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVD-NGYLADNPFKGISPLKESR- 153 L + + + G S T+ + ++ + V ++ NP K ++ + Sbjct: 113 LQEFLNKQYAH-----GYSKNTLARLRSIISHSLEMAVSPYQFIKVNPAKNLTLPRFDNI 167 Query: 154 -TIPDPLSREEFIRLI-DACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 +S E F ++I ++ TG+R GE+C L W+ +D + T+ I Sbjct: 168 AKENIVISIENFNKIIGRFPCGTSFYIPLQIAFNTGMRVGEVCGLTWDCVDFEKKTIRIE 227 Query: 212 R-----NLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 + F+ PKT+ G+ R I + I+ L++ +K++ Sbjct: 228 KILIFKTKQGYEFSTPKTK-GSIRTISIGDTLINILKTHKNWQEENKKNYGSY------- 279 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL 326 + K G T+ S+R + ++ + RHT+A L Sbjct: 280 ---------YNDNNFVCTKENGSFVTMTSLRYLSRIINMELQIK-FNFHSLRHTHATMLL 329 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPH 379 GAN I +++GH+ +Y ++ N+ V +L L++ P+ Sbjct: 330 EGGANIKDIQDRLGHSKFSTTMDLYSHVTAKMQNSTVNILENILNQEVKLPPN 382 >UniRef50_A0R499 Gp41 protein n=2 Tax=Mycobacterium RepID=A0R499_MYCS2 Length = 404 Score = 177 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 67/334 (20%), Positives = 134/334 (40%), Gaps = 35/334 (10%) Query: 34 ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 A +LT+++ + +L + + +++ Y ++ I+ +G++ + S I K+ L +V + Sbjct: 67 APSELTVEDAVDSWLLGQR--IRPKTMSAYITSLRPIVDHLGKRTVQS-ITKDDLEQVVQ 123 Query: 94 ELLTG------YQIPKSNYIVTQPGRSA---VTVNNYMTNLNAVFQFGVDNGYLADNPFK 144 L G + P + RS ++N + ++F+ V+ G + N Sbjct: 124 ALRAGTSKMGTWNAPTKLTKAAKKVRSPWAASSINPMLARTRSIFEDLVNQGVVVRNVAA 183 Query: 145 GISPL-KESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDL 203 + PL ++ + L+ E+ +L+ + W ++V G+R GE+ AL W+ +D Sbjct: 184 LVKPLATDTEKTMNTLNAEQVTQLLAVTDSHCYGIAWRLAVL-GLRRGEILALRWDAVDF 242 Query: 204 KNGTMMIRRN----LAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDV 259 GT+ I PKT+ + R + + + ALR Sbjct: 243 DAGTLAISAARLATAGGATTGAPKTKT-SVRTLPMPEDLTAALRR--------------- 286 Query: 260 HFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRH 319 R+ + + K + V +G D++ W + AGL H + + +RH Sbjct: 287 -VRKRQKEYRLKLGSKWTDSGYVVVDEFGVAPYPDTLTAAWRKTLANAGLPHVRLHDARH 345 Query: 320 TYACWSLTAGANPAFIANQMGHADAQMVFQVYGK 353 + A +G IA +GH D + Y Sbjct: 346 SCATLMHLSGVPTVVIAAWLGHQDPGFTLRTYAH 379 >UniRef50_Q1D2W1 Site-specific recombinase, phage integrase family n=7 Tax=Myxococcales RepID=Q1D2W1_MYXXD Length = 334 Score = 177 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 76/335 (22%), Positives = 131/335 (39%), Gaps = 56/335 (16%) Query: 56 AKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEV-------------RKELLTGYQI 101 +S+++ R +++ +IL G+ LA +I ++ + RK+ + I Sbjct: 20 KHSSVDSKRQILRDHILPFFGKVALA-NIGLAEIEDFKAHMRKKKSAAHKRKDSASKRAI 78 Query: 102 PKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPL-KESRTIPDPLS 160 K +P S T+NN +T L+ + ++G + P + P K + D LS Sbjct: 79 RKRQRSEPKP-LSLKTINNVLTVLHKLLTLAEEHGVIRQAP--RVKPFGKLPKPPFDFLS 135 Query: 161 REEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFT 220 EE +L+ A + + L V++ TG+R GEL L W D+ L G + +RR + + Sbjct: 136 FEEADQLL-AVAEPEWRTLLRVAIKTGLRQGELIGLRWHDLTLTRGLLHVRRTIWRGIEG 194 Query: 221 VPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEV 280 +PK G R + L +DAL + ++ FVF Sbjct: 195 LPK--GGRERTVDLPASVVDALNAHRH----------------------RRGRFVF---- 226 Query: 281 SARVKNYGDHFTVDSIRQMWDAAIKRAGLRH----RKSYQSRHTYACWSLTAGANPAFIA 336 + G T + A++ AG+ + RHTY G I Sbjct: 227 ---CQEDGQPLTKGKMAAPLGRALRAAGITREVGQIGWHDLRHTYGSHLAMRGIPLKVIQ 283 Query: 337 NQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 +GHA +M Y + VA+L+ L+ Sbjct: 284 ELIGHATIEMT-NRYAHLSPDTRREAVAVLDRPLA 317 >UniRef50_Q854V7 Gp41 n=1 Tax=Mycobacterium phage Che9c RepID=Q854V7_9CAUD Length = 400 Score = 177 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 66/317 (20%), Positives = 127/317 (40%), Gaps = 24/317 (7%) Query: 39 TIKELAEKFLALKET-EVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLT 97 T++E + +LA K A+++++ Y + ++ +GE + + K L ++ L Sbjct: 77 TVREACDDWLAGKRAANRAESTVDGYEEKLTVVIEQLGEIEI-QKLTKRHLDDLVTALRE 135 Query: 98 GYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPD 157 G +P N +P S +VN + L ++ + G+ N + ++ + T PD Sbjct: 136 G-GLPSPNGKPRKPW-SPRSVNYLLGLLVSILESEQKQGHTVRNVAALVDRIEANPTPPD 193 Query: 158 PLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN-LAK 216 PL+ E L+ + W +++ R E+ L W D+DL T+ ++ L + Sbjct: 194 PLTESEVETLLAHIAGDRYAIAWELALAGF-RLAEISGLRWCDVDLDARTVTVQNTRLQR 252 Query: 217 DRFTVPKTQAG--TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTF 274 + + KT + R + L A ++ + + + + Sbjct: 253 GKKRIEKTPKSRASRRELPLPDDLFAAFKAARKIQAADQLRLGEA--------------- 297 Query: 275 VFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAF 334 ++ V G T ++I W +K AGLRH + + +RHT G A Sbjct: 298 -YEASGYVVVNEAGTPLTPNAIENRWARVLKAAGLRHVRLHDARHTCGTLMHLRGVPTAL 356 Query: 335 IANQMGHADAQMVFQVY 351 I+ +GHA Q Y Sbjct: 357 ISAWLGHASKAFTLQTY 373 >UniRef50_Q17VL1 Bacteriophage-related integrase n=4 Tax=Helicobacter RepID=Q17VL1_HELAH Length = 378 Score = 177 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 82/344 (23%), Positives = 138/344 (40%), Gaps = 45/344 (13%) Query: 29 EKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKL 88 ++ + + +TI E ++FL LK + TSL++ V +I S +G K KL Sbjct: 78 KQTIKLQARITILEALKRFLGLK-IGLKNTSLHSLEIVFNSIFSAMGLKE------SAKL 130 Query: 89 LEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGI-- 146 ++ KE + Y T+ NL + F GYL NP+ + Sbjct: 131 QKITKEAIAKYHEQALQR------YKKNTLKTQHANLKSFLAFCESEGYLEKNPYFAVTL 184 Query: 147 SPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNG 206 KE++ I +P S EE +I + K V+ TG+R GE AL WEDID + Sbjct: 185 KNAKEAKKI-EPFSLEEVEAIIKNAPSLSLKAFLMVAFLTGMRTGEQLALTWEDIDFDHQ 243 Query: 207 TMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 T+ I ++L + + R + L++PA L+ E + Sbjct: 244 TISINKSLNEWGQITSPKNQNSVREVDLLEPAAKILK-------------------ELKK 284 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL 326 +E FVF G ++ + +K L+ RK Y +RHT+A L Sbjct: 285 SEPAGKKFVF----------IGMPRRTSVFQRRFRELLKALDLKDRKLYTTRHTFASLML 334 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + G P +++ +GH D + Y ++ + + + L Sbjct: 335 SQGEEPMWVSKMLGHKDLNTTYGAYSHYIPQQDRERAKFLKGIF 378 >UniRef50_UPI0001B572BA integrase family protein n=1 Tax=Streptomyces sp. C RepID=UPI0001B572BA Length = 363 Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 110/324 (33%), Gaps = 39/324 (12%) Query: 55 VAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRS 114 + T++ YR ++N +L + KL ++ ++ + GR Sbjct: 2 LKPTTMARYRDYVRN--------DLVPAFGTLKLDQLAHRHISAFV-----TCQLAAGRG 48 Query: 115 AVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACR-- 172 T+ + L++ V L NP + + +E R + C Sbjct: 49 RTTLYRCLATLSSALGDAVRQHRLPHNPASPPVLRRPPAPERRIWTAQEAARFLTYCHQA 108 Query: 173 NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-----KDRFTVPKTQAG 227 + +L+ + TG+R GE L W+D+ L + +R L+ + T PKT+ Sbjct: 109 DPDMADLFEFLIGTGMRKGEALGLHWDDVYLGEAVLYVRCTLSAIDNNRLVITAPKTR-S 167 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 + + + ALR TR ++ G + VF ++ Sbjct: 168 SRGWVAISPRVATALRHHARTTRPTR-----------GDPDDPFAGLVF-------CRSD 209 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 G + + AG+ + RH A +++AG ++ + H+ Sbjct: 210 GRPLGPHQVLDRLHELSEEAGVPRITVHDLRHLAATITISAGVPLTVVSKTLRHSTLSTT 269 Query: 348 FQVYGKWMSENNNAQVALLNTQLS 371 +Y + V ++ L+ Sbjct: 270 ANIYSHLTRQAAREAVDTIDRTLT 293 >UniRef50_A8RK44 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RK44_9CLOT Length = 366 Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats. Identities = 66/342 (19%), Positives = 119/342 (34%), Gaps = 46/342 (13%) Query: 38 LTIKELAEKFLALKETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELL 96 + K+ ++ + + +T+L + K +L GE + ++I + + EL+ Sbjct: 56 MKFKDFVALYMKDADPRLRETTLANKHYLFNKKVLPYFGEMPI-NAIKPTDIRNWQNELI 114 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPL-KESRTI 155 G S + L A F F V L +NP + K++ Sbjct: 115 N-------YRRPNGRGYSPTYLRTINNQLTAAFNFAVKFYGLRENPCHKAGTMGKKNADE 167 Query: 156 PDPLSREEFIRLIDACRNQQ-AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL 214 + EEF I A ++ ++ V YTG+R GEL AL EDID + + +N Sbjct: 168 MLFWTNEEFKVFIKAMESRPVGYTVFMVMYYTGLRVGELLALTPEDIDFDRHIISVNKNY 227 Query: 215 A----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQ 270 KD PKT+AG R + + K L+ + + Q Sbjct: 228 QHLNGKDYIYPPKTEAG-YREVVMPKVLESCLKDYLA-----------------KLYDVQ 269 Query: 271 KCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGA 330 +F + + + +G + + + RHT+A + G Sbjct: 270 PTDRIF-------------PYDRGWVGRQMKYGCDHSGTQKIRVHDVRHTHASLLIDMGC 316 Query: 331 NPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 P +A ++GH Q + Y + L+ + Sbjct: 317 TPLLVAERLGHERVQTTMETYSHLYPNKQSEVANQLDAMAEK 358 >UniRef50_B1I9D1 Site-specific recombinase, phage integrase family n=15 Tax=Streptococcus RepID=B1I9D1_STRPI Length = 377 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 74/361 (20%), Positives = 134/361 (37%), Gaps = 35/361 (9%) Query: 19 AKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYR--AVIKNILSIIGE 76 A+ + S L++ +TI L E K S + K+I Sbjct: 43 AEHYLRSVELKE-RFYGAKITIPILYELLKEEDSINHRKASYINTQDNNYNKHIKDYFSM 101 Query: 77 KNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNG 136 + + E + + R+ L + + S T+N M L +F G+ G Sbjct: 102 VDNVGKLTYEDIYQFREHL------RQKVAKNSDKPLSTNTINKIMILLKKIFDVGLRKG 155 Query: 137 YLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQA--KNLWCVSVYTGVRPGELC 194 Y NP I L +T + +EF + ++ K L+ V +TG+R GE Sbjct: 156 YYTSNPANLIKKLPIEKTKMQFWTVKEFQHFLTLFETEEYNIKLLFTVLFFTGLRLGEAL 215 Query: 195 ALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTR 250 AL W+DID + T+ I +++ ++ + KT+AGT R+I K + + + Q Sbjct: 216 ALTWQDIDFTSNTIHITKSVYVNKGISHVSTTKTKAGTRRIIINKKLSHELQQWQQKQKH 275 Query: 251 LSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKR-AGL 309 L ++ D + VFQ KN ++ + ++R + L Sbjct: 276 LLEQFTSDSMTLQ-----------VFQGSPITITKN--------AVENQYKKILERDSTL 316 Query: 310 RHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQ 369 + + + RH++A + G + + ++GHA Y L+ Sbjct: 317 KKIRIHDFRHSHASLLINQGEDYLVVKERLGHASITTTIDTYSHLYPSKQKDLADKLDEL 376 Query: 370 L 370 L Sbjct: 377 L 377 >UniRef50_Q65KE0 Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65KE0_BACLD Length = 381 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 71/345 (20%), Positives = 130/345 (37%), Gaps = 43/345 (12%) Query: 40 IKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTG 98 AEK+ K+ + +++ YR + NIL +G K+ ++ +E+L Sbjct: 67 FSTFAEKWFESKKVRLRSSTIVNYREQLDYNILPYLG---------TFKIKDITEEVLQH 117 Query: 99 YQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDP 158 Y N + + + T+ + V + G ++ E+R I Sbjct: 118 YI----NRLHNERKLAPATIRTAFGVVAEVLKKASRKGAFDLAILDDVNLPPENR-ISKV 172 Query: 159 LSREEFIRLIDACRN----QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL 214 + +DA + +SV TG+R GE+ L W DID + G + IR+ L Sbjct: 173 WNESNVQAFLDARNRIVSLTRYFIGMVLSVITGMRMGEVLGLRWSDIDFEKGYLTIRQTL 232 Query: 215 AK-----DRFTVP--KTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRT 267 AK + VP KT AG R +HL K I+ L + + KE + + + Sbjct: 233 AKIDDEGNYGLVPEVKTAAGF-RTVHLPKFFIEYLIEHKKMVQREKEILGEDYI------ 285 Query: 268 EKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLT 327 +G ++ R+ + I + L RHT+A + ++ Sbjct: 286 ----------DYDLVVCTKHGKWVHPNNYRRAFTRLIAQLELPKIPPKNLRHTHATYLIS 335 Query: 328 AGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 G +P + ++GHA + Y + V L+ +++ Sbjct: 336 IGISPKIVQERLGHAHIKTTLGTYSHVLPSMQAELVGKLDDLVAK 380 >UniRef50_Q88SM0 Prophage Lp4 protein 1, integrase n=1 Tax=Lactobacillus plantarum RepID=Q88SM0_LACPL Length = 388 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 71/353 (20%), Positives = 127/353 (35%), Gaps = 46/353 (13%) Query: 34 ARQDLTIKELAEKFL-ALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEV 91 A ++T EL K+ + +V +++ + + +IL +G + + I + + Sbjct: 67 ANDNITFAELYTKWFNEDYKEQVKESTYMITDDIFRLHILPELGSQRV-KRITVAQCQSI 125 Query: 92 RKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE 151 + L T + T +VF FGV NP S K+ Sbjct: 126 VHKWLNQGF---------------KTYRRFRTYAISVFDFGVRMELTTRNPMAKTSIPKQ 170 Query: 152 SRT----IPDPLSREEFIRLIDAC---RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLK 204 D + E + +D N QA + + +TG+R GE AL W DI+ + Sbjct: 171 KTKPQAPHVDFYEKSELLHFLDCASKHENPQAFMFFRLLAFTGLRRGEALALQWSDINFE 230 Query: 205 NGTMMIRRNLAKDR-----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDV 259 + + + A + PKT ++ A + +MT R Sbjct: 231 TNELTVNKTQAVGKRWRTIIQTPKTNTSYRTIVLDPDTAQWLHKWKMTQAR--------- 281 Query: 260 HFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRH 319 E G VF + + + ++ + K+ GLRH K + RH Sbjct: 282 QCFELGFNANDPSQLVFTNQQN-------KLMSPSTVNYFNWSICKKYGLRHIKIHAFRH 334 Query: 320 TYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 T+ + A A ++ +GHAD ++ Q+Y + N + L +SE Sbjct: 335 TFCTLAFEAHAGINEVSKTLGHADLKITEQIYLHVTKKQKNETASKLARYMSE 387 >UniRef50_Q88UJ5 Prophage Lp3 protein 1, integrase n=1 Tax=Lactobacillus plantarum RepID=Q88UJ5_LACPL Length = 385 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 136/350 (38%), Gaps = 47/350 (13%) Query: 37 DLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKEL 95 + K++ + + + V +++ T + + + +IL I + +A K + + +K + Sbjct: 67 NTIFKDIYQLWFTQYKQTVKESTWVTTQRLFRLHILPIFSDYRIA----KISIKDCQKAI 122 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPL-----K 150 + + Y T+ NY+ V + ++ +++NP K + + Sbjct: 123 NQWFNAGLAKYH---------TLMNYVA---KVLDYAINIDLISENPAKRVIVPVNKNDR 170 Query: 151 ESRTIPDPLSREEFIRLIDACRNQ----QAKNLWCVSVYTGVRPGELCALGWEDIDLKNG 206 + + + + E + + QA + ++ +TG+R E+ L W DID N Sbjct: 171 SRKNLENYFDKAELQHFFECLTDDDNTPQASVFFRLAAFTGMRKSEMLCLEWSDIDFSNH 230 Query: 207 TMMIRRNLAKDR-----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHF 261 T+ + + ++ PKT A +NR ++L I L+ + Sbjct: 231 TIRVNKTQSRGDGARLLVQAPKT-ARSNRTVYLDPTTIKILQHWQVDQKKW--------L 281 Query: 262 REYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTY 321 +G Q +VF E + F R+ + + + L+H + RHTY Sbjct: 282 LRFGFNINQGNHYVFANE-------NNEMFQPSKPRKWLEHTLTKYDLKHVTVHAFRHTY 334 Query: 322 ACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 A + A A+ + +Q+GH+ + +Y ++ N L L+ Sbjct: 335 ATLAFEAHASIKSVQDQLGHSSYRTTLDIYTAVTAKQKNEATEKLANYLN 384 >UniRef50_B3WDC1 Integrase n=3 Tax=root RepID=B3WDC1_LACCB Length = 394 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 71/354 (20%), Positives = 125/354 (35%), Gaps = 42/354 (11%) Query: 36 QDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKE 94 + + + + +++ + V + S+ YR +K I+ IG+ LA KE E Sbjct: 66 ERILMADYLNQWITKLKVNVKEGSMIIYRYNLKKYIIPKIGDIRLAKYTLKEH-QEFISS 124 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS---PLKE 151 L G S TV L+ + V GY+ NP G+ K+ Sbjct: 125 LFND-------------GLSLNTVKLINGTLHNALKKAVAIGYITKNPTVGVEFSAYAKD 171 Query: 152 SRTIPDPLSREEFIRLIDACRNQQ---AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTM 208 + ++++ I+A + + + + G+R GE AL W DID T+ Sbjct: 172 NSKKLHFWTKDQVGSFIEAAEEDKEPMWLSFFVTLIDCGLRVGEAMALRWSDIDFSKNTL 231 Query: 209 MIRRNL----------AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIID 258 + K PKT + R ++ D L+ Q H Sbjct: 232 SVNATRIYRAETGSNAGKIALDRPKTL-SSKRTEYMTARVNDLLQQQYE------RHFSH 284 Query: 259 VHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSR 318 + + + + FVF A+ +G + ++ RAGL H + + R Sbjct: 285 GNVQGFRFSTSHNNDFVFTYSSDAK---FGQPLRSRATTGAFNRITNRAGLPHIRIHDLR 341 Query: 319 HTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 HT+A AG + I + +GH D Q+Y + L++ Sbjct: 342 HTHAVLMREAGLSLDDIKDDLGHKDISTT-QIYAEISPAKKKENHQQFEKYLNQ 394 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76168 Putative lambdoid prophage Qin defective integra... 412 e-113 UniRef50_UPI0001826473 putative integrase n=1 Tax=Enterobacter c... 364 3e-99 UniRef50_B6XGP6 Putative uncharacterized protein n=1 Tax=Provide... 339 9e-92 UniRef50_Q2RHJ2 Phage integrase n=3 Tax=Firmicutes RepID=Q2RHJ2_... 335 1e-90 UniRef50_A8GE25 Integrase family protein n=18 Tax=Enterobacteria... 335 2e-90 UniRef50_A2P3A8 Integrase n=3 Tax=Vibrionaceae RepID=A2P3A8_VIBCH 327 5e-88 UniRef50_B7DTQ3 Integrase family protein n=2 Tax=Bacillales RepI... 326 9e-88 UniRef50_Q1AUQ4 Phage integrase n=3 Tax=Rubrobacter xylanophilus... 323 7e-87 UniRef50_B0KAZ5 Phage integrase family protein n=3 Tax=Thermoana... 320 6e-86 UniRef50_C9RBE5 Integrase family protein n=1 Tax=Ammonifex degen... 320 7e-86 UniRef50_C8VWS4 Integrase family protein n=1 Tax=Desulfotomaculu... 317 5e-85 UniRef50_B7DTD1 Integrase family protein n=2 Tax=Alicyclobacillu... 317 5e-85 UniRef50_D0Z3D7 Putative integrase n=1 Tax=Photobacterium damsel... 311 3e-83 UniRef50_B9MQ70 Integrase family protein n=1 Tax=Anaerocellum th... 311 4e-83 UniRef50_B1VP49 Putative phage integrase n=1 Tax=Streptomyces gr... 308 3e-82 UniRef50_D1CFY4 Integrase family protein n=1 Tax=Thermobaculum t... 307 3e-82 UniRef50_B9MR26 Integrase family protein n=2 Tax=Anaerocellum th... 307 3e-82 UniRef50_B0PGN2 Putative uncharacterized protein n=2 Tax=Clostri... 307 5e-82 UniRef50_C1XYN2 Site-specific recombinase XerD n=1 Tax=Meiotherm... 304 4e-81 UniRef50_D2LSV7 Integrase family protein n=1 Tax=Bacillus cellul... 303 6e-81 UniRef50_B1B8Q2 Phage integrase n=1 Tax=Clostridium botulinum C ... 302 1e-80 UniRef50_B4BIA4 Integrase family protein n=2 Tax=Geobacillus Rep... 302 1e-80 UniRef50_A8L4Q7 Integrase family protein n=9 Tax=Actinomycetales... 302 2e-80 UniRef50_A4XMZ7 Phage integrase family protein n=3 Tax=Clostridi... 301 3e-80 UniRef50_B8I354 Integrase family protein n=1 Tax=Clostridium cel... 301 3e-80 UniRef50_Q3Z840 Site-specific recombinase, phage integrase famil... 300 6e-80 UniRef50_D1C8V1 Integrase family protein n=1 Tax=Sphaerobacter t... 299 1e-79 UniRef50_B1RM53 Phage integrase n=4 Tax=Clostridium RepID=B1RM53... 298 2e-79 UniRef50_P76056 Putative lambdoid prophage Rac integrase n=30 Ta... 298 2e-79 UniRef50_C8VWK7 Integrase family protein n=1 Tax=Desulfotomaculu... 297 5e-79 UniRef50_C2RY84 Prophage LambdaBa04, site-specific recombinase, ... 297 7e-79 UniRef50_A7MYL9 Putative uncharacterized protein n=3 Tax=Vibrio ... 296 1e-78 UniRef50_B7IY65 DNA integration/recombination/invertion protein ... 293 8e-78 UniRef50_C1CZ59 Putative Tyrosine recombinase xerC-like protein ... 293 8e-78 UniRef50_A8MGP9 Integrase family protein n=1 Tax=Alkaliphilus or... 292 1e-77 UniRef50_C3L682 Prophage LambdaBa04, site-specific recombinase, ... 292 2e-77 UniRef50_D2S8K7 Integrase family protein n=1 Tax=Geodermatophilu... 291 2e-77 UniRef50_B8D1P6 Phage integrase family protein n=1 Tax=Halotherm... 289 9e-77 UniRef50_C1IAU4 Phage integrase n=1 Tax=Clostridium sp. 7_2_43FA... 289 1e-76 UniRef50_C6QSP6 Integrase family protein n=1 Tax=Geobacillus sp.... 289 1e-76 UniRef50_B0KAT2 Phage integrase family protein n=7 Tax=Clostridi... 288 2e-76 UniRef50_Q3ABG2 Prophage LambdaCh01, site-specific recombinase, ... 288 2e-76 UniRef50_B9MP49 Integrase family protein n=1 Tax=Anaerocellum th... 288 2e-76 UniRef50_Q0AUP6 Phage integrase n=1 Tax=Syntrophomonas wolfei su... 287 4e-76 UniRef50_UPI0001BC493F putative integrase n=1 Tax=Neisseria muco... 287 5e-76 UniRef50_D2BJR0 Site-specific recombinase, phage integrase famil... 286 1e-75 UniRef50_A4AD26 Prophage integrase n=5 Tax=Gammaproteobacteria R... 285 1e-75 UniRef50_A4ILC8 DNA integration/recombination/invertion protein ... 285 2e-75 UniRef50_C1IBC3 Phage integrase n=1 Tax=Clostridium sp. 7_2_43FA... 284 5e-75 UniRef50_D2S5L4 Integrase family protein n=1 Tax=Geodermatophilu... 283 5e-75 UniRef50_D1A578 Integrase family protein n=1 Tax=Thermomonospora... 283 6e-75 UniRef50_C9R814 Integrase family protein n=2 Tax=Ammonifex degen... 283 1e-74 UniRef50_C9RA80 Integrase family protein n=1 Tax=Ammonifex degen... 280 5e-74 UniRef50_UPI0001694281 DNA integration/recombination/invertion p... 280 5e-74 UniRef50_A9VJZ8 Integrase family protein n=15 Tax=Bacillus cereu... 279 1e-73 UniRef50_B9KXE0 Transposase n=1 Tax=Thermomicrobium roseum DSM 5... 278 2e-73 UniRef50_Q3Z6H5 Site-specific recombinase, phage integrase famil... 278 3e-73 UniRef50_A4J0G7 Phage integrase family protein n=1 Tax=Desulfoto... 277 5e-73 UniRef50_C2E2T4 Bacteriophage integrase n=5 Tax=Lactobacillus Re... 277 5e-73 UniRef50_C4V5B3 Prophage LambdaCh01, site-specific recombinase p... 276 1e-72 UniRef50_A6P1V8 Putative uncharacterized protein n=2 Tax=Bactero... 276 1e-72 UniRef50_C0QHJ7 Phage integrase family protein n=1 Tax=Desulfoba... 275 1e-72 UniRef50_D1PRY2 Site-specific recombinase, phage integrase famil... 275 2e-72 UniRef50_C8WVH7 Integrase family protein n=1 Tax=Alicyclobacillu... 275 3e-72 UniRef50_A8T0M8 Putative integrase n=1 Tax=Vibrio sp. AND4 RepID... 274 3e-72 UniRef50_C7GF85 Phage integrase n=2 Tax=Clostridiales RepID=C7GF... 274 4e-72 UniRef50_B0PGN1 Putative uncharacterized protein n=2 Tax=Clostri... 274 4e-72 UniRef50_C4FP65 Putative uncharacterized protein n=1 Tax=Veillon... 273 5e-72 UniRef50_C3EB65 DNA integration/recombination/invertion protein ... 273 6e-72 UniRef50_Q9F0J7 Integrase-like protein n=7 Tax=Staphylococcus Re... 273 6e-72 UniRef50_A6GR01 Phage integrase n=3 Tax=Proteobacteria RepID=A6G... 273 6e-72 UniRef50_A8UWI5 Phage integrase n=1 Tax=Hydrogenivirga sp. 128-5... 273 7e-72 UniRef50_A4J1T6 Phage integrase family protein n=1 Tax=Desulfoto... 273 8e-72 UniRef50_A7VZ12 Putative uncharacterized protein n=2 Tax=Clostri... 272 2e-71 UniRef50_Q252J3 Putative uncharacterized protein n=1 Tax=Desulfi... 272 2e-71 UniRef50_UPI0001C37C27 integrase family protein n=1 Tax=Ruminoco... 272 2e-71 UniRef50_Q1ZMG0 Phage integrase n=2 Tax=Photobacterium RepID=Q1Z... 272 2e-71 UniRef50_C8X726 Integrase family protein n=1 Tax=Nakamurella mul... 271 3e-71 UniRef50_Q0H247 DNA integration/recombination protein n=6 Tax=ro... 271 3e-71 UniRef50_UPI0001C35B62 integrase family protein n=1 Tax=Clostrid... 271 4e-71 UniRef50_D0ADR3 Predicted protein n=2 Tax=Enterococcus faecium R... 271 4e-71 UniRef50_C9AMW3 Phage integrase n=8 Tax=Enterococcus faecium Rep... 269 1e-70 UniRef50_Q8ERR7 Hypothetical conserved protein n=1 Tax=Oceanobac... 269 1e-70 UniRef50_D2BLD3 Phage integrase n=4 Tax=root RepID=D2BLD3_LACLK 269 1e-70 UniRef50_B4V6V4 Phage integrase n=6 Tax=Streptomyces RepID=B4V6V... 269 1e-70 UniRef50_C2NSI2 DNA integration/recombination/invertion protein ... 269 2e-70 UniRef50_B6W9U7 Putative uncharacterized protein n=1 Tax=Anaeroc... 268 2e-70 UniRef50_A4XMV7 Phage integrase family protein n=2 Tax=Caldicell... 268 2e-70 UniRef50_A5N1D5 Phage integrase-related protein n=2 Tax=Clostrid... 268 2e-70 UniRef50_C0GET2 Integrase family protein n=1 Tax=Dethiobacter al... 268 2e-70 UniRef50_A5N1F6 Integrase-related protein n=3 Tax=Clostridia Rep... 268 3e-70 UniRef50_D1XEM4 Integrase family protein n=1 Tax=Streptomyces sp... 268 3e-70 UniRef50_A6NXL1 Putative uncharacterized protein n=2 Tax=Bacteri... 267 6e-70 UniRef50_D1BL69 Integrase family protein n=1 Tax=Veillonella par... 267 7e-70 UniRef50_A9KZM7 Integrase family protein n=4 Tax=Gammaproteobact... 266 1e-69 UniRef50_A7B6B9 Putative uncharacterized protein n=2 Tax=Clostri... 266 1e-69 UniRef50_A1SI41 Phage integrase family protein n=1 Tax=Nocardioi... 266 1e-69 UniRef50_C9XJT1 Integrase n=6 Tax=Clostridium difficile RepID=C9... 266 1e-69 UniRef50_A5WDD8 Phage integrase family protein n=6 Tax=Proteobac... 265 1e-69 UniRef50_C2Z776 Prophage LambdaBa04, site-specific recombinase, ... 264 4e-69 UniRef50_A4XLL4 Phage integrase family protein n=1 Tax=Caldicell... 264 4e-69 UniRef50_UPI000169495E prophage LambdaBa04, site-specific recomb... 264 5e-69 UniRef50_Q03GP3 Integrase n=1 Tax=Pediococcus pentosaceus ATCC 2... 264 5e-69 UniRef50_C0EE56 Putative uncharacterized protein n=1 Tax=Clostri... 263 6e-69 UniRef50_A3JCU8 Phage integrase n=2 Tax=Marinobacter sp. ELB17 R... 263 6e-69 UniRef50_A1HTM7 Phage integrase family protein n=1 Tax=Thermosin... 263 7e-69 UniRef50_Q98MQ9 Bacteriophage integrase n=5 Tax=Rhizobiales RepI... 263 7e-69 UniRef50_Q2JGT4 Phage integrase n=4 Tax=Frankia RepID=Q2JGT4_FRASC 263 7e-69 UniRef50_C5UVC6 Site-specific recombinase, phage integrase famil... 263 8e-69 UniRef50_C9AZK9 Phage integrase n=6 Tax=Enterococcus RepID=C9AZK... 263 1e-68 UniRef50_Q82ZU2 Site-specific recombinase, phage integrase famil... 262 1e-68 UniRef50_C5T6H4 Integrase family protein n=2 Tax=Burkholderiales... 262 1e-68 UniRef50_Q8R890 Tyrosine recombinase xerC-like n=5 Tax=Clostridi... 262 1e-68 UniRef50_A7VEW1 Putative uncharacterized protein n=4 Tax=Clostri... 262 1e-68 UniRef50_C7TH34 Phage-related integrase n=1 Tax=Lactobacillus rh... 262 2e-68 UniRef50_C3IU95 DNA integration/recombination/inversion protein ... 262 2e-68 UniRef50_C9N6T9 Integrase family protein n=7 Tax=Streptomyces Re... 262 2e-68 UniRef50_D2SBK5 Integrase family protein n=1 Tax=Geodermatophilu... 262 2e-68 UniRef50_A0JQR3 Phage integrase n=3 Tax=Lactobacillus salivarius... 262 2e-68 UniRef50_A3DCS0 Phage integrase n=6 Tax=Bacteria RepID=A3DCS0_CLOTH 262 2e-68 UniRef50_A9KI10 Integrase family protein n=1 Tax=Clostridium phy... 262 2e-68 UniRef50_C2BD46 Possible phage integrase n=1 Tax=Anaerococcus la... 262 2e-68 UniRef50_A6TLJ2 Phage integrase family protein n=1 Tax=Alkaliphi... 261 3e-68 UniRef50_C8NHZ6 Phage integrase family site-specific recombinase... 260 5e-68 UniRef50_Q65KT3 Lambda integrase-like protein(Phage related) n=1... 260 7e-68 UniRef50_D0L542 Integrase family protein n=3 Tax=Bacteria RepID=... 260 9e-68 UniRef50_A3D4Z5 Phage integrase family protein n=3 Tax=Shewanell... 260 9e-68 UniRef50_C2YK72 Phage integrase n=3 Tax=Bacillus cereus group Re... 260 9e-68 UniRef50_A8LF05 Integrase family protein n=1 Tax=Frankia sp. EAN... 259 2e-67 UniRef50_UPI0001C375B8 hypothetical protein RflaF_20511 n=1 Tax=... 258 2e-67 UniRef50_C7N6A1 Site-specific recombinase XerD n=1 Tax=Slackia h... 258 2e-67 UniRef50_C0EDT0 Putative uncharacterized protein n=2 Tax=Clostri... 258 2e-67 UniRef50_C6MG53 Integrase family protein n=1 Tax=Nitrosomonas sp... 258 3e-67 UniRef50_C0XLK8 Phage integrase family site specific recombinase... 257 4e-67 UniRef50_A8MGA1 Integrase family protein n=7 Tax=Clostridiaceae ... 257 6e-67 UniRef50_Q8ETV2 Integrase n=3 Tax=Bacilli RepID=Q8ETV2_OCEIH 257 6e-67 UniRef50_Q88SM0 Prophage Lp4 protein 1, integrase n=1 Tax=Lactob... 257 6e-67 UniRef50_C9A167 Integrase n=1 Tax=Enterococcus gallinarum EG2 Re... 256 6e-67 UniRef50_C2VI23 Site-specific recombinase, phage integrase n=3 T... 256 8e-67 UniRef50_C0X6I8 Phage integrase family site specific recombinase... 256 9e-67 UniRef50_UPI0001C37419 Phage integrase n=1 Tax=Ruminococcus flav... 256 1e-66 UniRef50_C1D584 Phage integrase n=1 Tax=Laribacter hongkongensis... 256 1e-66 UniRef50_A2RHC7 Phage integrase n=3 Tax=root RepID=A2RHC7_LACLM 256 1e-66 UniRef50_C7T893 Phage integrase n=5 Tax=Lactobacillus RepID=C7T8... 255 1e-66 UniRef50_C5WEI1 Site-specific recombinase, phage integrase famil... 255 2e-66 UniRef50_B2V4P6 Phage integrase family protein n=9 Tax=root RepI... 255 2e-66 UniRef50_A6NRR1 Putative uncharacterized protein n=1 Tax=Bactero... 255 2e-66 UniRef50_B7AAK4 Integrase family protein n=3 Tax=Thermus aquatic... 255 2e-66 UniRef50_Q31DR3 Tyrosine recombinase n=1 Tax=Thiomicrospira crun... 255 2e-66 UniRef50_B9KYK7 Putative integrase n=1 Tax=Thermomicrobium roseu... 255 2e-66 UniRef50_UPI0001C375E4 hypothetical protein RflaF_02473 n=2 Tax=... 255 2e-66 UniRef50_C1SH90 Site-specific recombinase XerD n=2 Tax=Denitrovi... 255 2e-66 UniRef50_Q24ZE5 Putative uncharacterized protein n=1 Tax=Desulfi... 255 2e-66 UniRef50_Q12GK7 Phage integrase n=11 Tax=Proteobacteria RepID=Q1... 254 5e-66 UniRef50_A1UH53 Phage integrase family protein n=3 Tax=root RepI... 254 5e-66 UniRef50_C1XUI9 Site-specific recombinase XerD n=1 Tax=Meiotherm... 253 6e-66 UniRef50_A0JQA1 Phage integrase n=2 Tax=Lactobacillales RepID=A0... 253 7e-66 UniRef50_Q38Y39 Site-specific recombinase, prophage lsa1 integra... 253 9e-66 UniRef50_C5WGZ4 Integrase n=18 Tax=root RepID=C5WGZ4_STRDG 253 9e-66 UniRef50_B2UXR9 Phage integrase n=3 Tax=Clostridium RepID=B2UXR9... 253 1e-65 UniRef50_B0MMM2 Putative uncharacterized protein n=1 Tax=Eubacte... 253 1e-65 UniRef50_Q0REL9 Integrase (Recombinase) n=2 Tax=Frankia RepID=Q0... 253 1e-65 UniRef50_C6LG06 Prophage LambdaBa02, site-specific recombinase, ... 252 1e-65 UniRef50_B0ABY5 Putative uncharacterized protein n=3 Tax=Clostri... 252 1e-65 UniRef50_Q65EQ4 Lambda integrase-like, N-terminal,DNA breaking-r... 252 1e-65 UniRef50_Q88UJ5 Prophage Lp3 protein 1, integrase n=1 Tax=Lactob... 252 2e-65 UniRef50_B2TMD1 Prophage LambdaBa04, site-specific recombinase, ... 252 2e-65 UniRef50_C9C7Z3 Phage integrase n=2 Tax=Bacilli RepID=C9C7Z3_ENTFC 251 3e-65 UniRef50_Q1CP24 DNA integration/recombination/inversion protein ... 251 3e-65 UniRef50_A9BYB6 Integrase family protein n=2 Tax=Comamonadaceae ... 251 4e-65 UniRef50_C7WMG1 Integrase n=9 Tax=Enterococcus RepID=C7WMG1_ENTFA 250 9e-65 UniRef50_P96629 ICEBs1 integrase n=1 Tax=Bacillus subtilis RepID... 250 1e-64 UniRef50_A0KWT4 Phage integrase family protein n=5 Tax=Gammaprot... 250 1e-64 UniRef50_D1CCF9 Integrase family protein n=1 Tax=Thermobaculum t... 249 1e-64 UniRef50_A7GRV3 Phage integrase family protein n=18 Tax=Bacillus... 249 1e-64 UniRef50_C1SH28 Site-specific recombinase XerD n=1 Tax=Denitrovi... 249 1e-64 UniRef50_A8HM00 Phage integrase n=5 Tax=Proteobacteria RepID=A8H... 249 1e-64 UniRef50_B2TP23 Prophage LambdaBa04, site-specific recombinase, ... 249 2e-64 UniRef50_D2SF19 LigA n=1 Tax=Geodermatophilus obscurus DSM 43160... 248 2e-64 UniRef50_Q831G3 Site-specific recombinase, phage integrase famil... 248 2e-64 UniRef50_C0BF20 Putative uncharacterized protein n=1 Tax=Coproco... 248 2e-64 UniRef50_C1SH59 Site-specific recombinase XerD n=1 Tax=Denitrovi... 248 2e-64 UniRef50_A8RK44 Putative uncharacterized protein n=1 Tax=Clostri... 248 3e-64 UniRef50_B2THD3 Site-specific recombinase, phage integrase famil... 248 3e-64 UniRef50_Q859R3 ORF39 n=1 Tax=Thermus phage IN93 RepID=Q859R3_9VIRU 248 3e-64 UniRef50_C8X883 Integrase family protein n=5 Tax=Actinomycetales... 248 4e-64 UniRef50_UPI0001C3746F phage integrase family site specific reco... 247 4e-64 UniRef50_C0EC03 Putative uncharacterized protein n=1 Tax=Clostri... 247 4e-64 UniRef50_A2RN22 Phage integrase n=9 Tax=Streptococcaceae RepID=A... 247 4e-64 UniRef50_A4J884 Phage integrase family protein n=1 Tax=Desulfoto... 247 5e-64 UniRef50_A6G3J3 Site-specific recombinase, phage integrase famil... 247 5e-64 UniRef50_UPI0001973B6A integrase family protein n=1 Tax=Clostrid... 247 5e-64 UniRef50_B8I8G5 Integrase family protein n=1 Tax=Clostridium cel... 247 5e-64 UniRef50_UPI0001BCC5A1 phage integrase n=1 Tax=Aeromicrobium mar... 247 6e-64 UniRef50_UPI0001C3741D prophage LambdaBa04, site-specific recomb... 246 6e-64 UniRef50_B2TKJ3 Phage integrase family protein n=4 Tax=Clostridi... 246 7e-64 UniRef50_Q24VE5 Putative uncharacterized protein n=1 Tax=Desulfi... 246 8e-64 UniRef50_C5UUP0 Phage integrase n=1 Tax=Clostridium botulinum E1... 246 1e-63 UniRef50_Q1BC50 Phage integrase n=4 Tax=Mycobacterium RepID=Q1BC... 246 1e-63 UniRef50_A7WY94 Integrase homolog n=25 Tax=Firmicutes RepID=A7WY... 246 1e-63 UniRef50_Q7A4J3 Int protein n=24 Tax=Bacilli RepID=Q7A4J3_STAAN 245 2e-63 UniRef50_C9A1I5 Phage integrase n=20 Tax=Enterococcus RepID=C9A1... 245 2e-63 UniRef50_C6WDZ8 Integrase family protein n=6 Tax=Actinomycetales... 245 2e-63 UniRef50_A7N7U1 Putative uncharacterized protein n=1 Tax=Vibrio ... 245 2e-63 UniRef50_C1XF66 Site-specific recombinase XerD n=4 Tax=Meiotherm... 244 3e-63 UniRef50_C4RQM1 Phage integrase n=1 Tax=Micromonospora sp. ATCC ... 244 4e-63 UniRef50_B0TI08 Phage integrase family protein n=14 Tax=root Rep... 244 4e-63 UniRef50_C7H2F1 Prophage LambdaCh01, site-specific recombinase, ... 243 6e-63 UniRef50_C7GI02 Site-specific recombinase, phage integrase famil... 243 7e-63 UniRef50_A0AGT2 Complete genome n=7 Tax=Bacilli RepID=A0AGT2_LISW6 243 9e-63 UniRef50_C9NE73 Integrase family protein n=1 Tax=Streptomyces fl... 243 9e-63 UniRef50_D1VST0 Phage integrase n=1 Tax=Peptoniphilus lacrimalis... 243 9e-63 UniRef50_UPI0001C37D82 integrase family protein n=1 Tax=Ruminoco... 243 1e-62 UniRef50_C4ZBA5 Phage integrase family protein n=10 Tax=Firmicut... 243 1e-62 UniRef50_B3WDC1 Integrase n=3 Tax=root RepID=B3WDC1_LACCB 243 1e-62 UniRef50_C0X0P7 Phage integrase family site specific recombinase... 242 1e-62 UniRef50_A1WV14 Phage integrase family protein n=1 Tax=Halorhodo... 241 2e-62 UniRef50_B5H9T3 TraSA integrase fusion protein n=4 Tax=Streptomy... 241 3e-62 UniRef50_C4DIX5 Site-specific recombinase XerD n=1 Tax=Stackebra... 241 3e-62 UniRef50_C6VKZ1 Prophage Lp4 protein 1, integrase n=1 Tax=Lactob... 241 4e-62 UniRef50_C2EIM6 Phage integrase n=1 Tax=Lactobacillus salivarius... 241 4e-62 UniRef50_Q65KE0 Lambda integrase-like, N-terminal,DNA breaking-r... 241 5e-62 UniRef50_B9E9M6 Integrase n=12 Tax=Staphylococcaceae RepID=B9E9M... 240 5e-62 UniRef50_A8FW51 Putative pore-forming cytotoxin integrase n=1 Ta... 240 5e-62 UniRef50_B1I9D1 Site-specific recombinase, phage integrase famil... 240 6e-62 UniRef50_B1BHZ0 Phage integrase n=1 Tax=Clostridium perfringens ... 240 6e-62 UniRef50_C9CDR3 Site-specific recombinase n=2 Tax=Enterococcus f... 240 7e-62 UniRef50_Q72GH2 DNA integration/recombination/invertion protein ... 240 8e-62 UniRef50_Q2T7M7 Bbp50 n=13 Tax=root RepID=Q2T7M7_BURTA 239 1e-61 UniRef50_C7CS77 Predicted protein n=3 Tax=Enterococcus faecalis ... 239 1e-61 UniRef50_A0QAN7 Site-specific recombinase, phage integrase famil... 239 1e-61 UniRef50_B6FRP3 Putative uncharacterized protein n=4 Tax=Bacteri... 239 1e-61 UniRef50_C4Z3W8 Integrase/recombinase XerC n=7 Tax=Clostridiales... 239 1e-61 UniRef50_C0C1S7 Putative uncharacterized protein n=1 Tax=Clostri... 239 1e-61 UniRef50_C3C7W0 Phage integrase n=2 Tax=Bacillus thuringiensis R... 239 1e-61 UniRef50_C7XQF9 Phage integrase n=1 Tax=Fusobacterium sp. 3_1_36... 239 2e-61 UniRef50_A6FXR9 Phage integrase n=1 Tax=Plesiocystis pacifica SI... 239 2e-61 UniRef50_Q03L48 Integrase n=30 Tax=Streptococcus RepID=Q03L48_STRTD 238 2e-61 UniRef50_C4LFZ6 Integrase family protein n=1 Tax=Tolumonas auens... 238 2e-61 UniRef50_B6G0S2 Putative uncharacterized protein n=1 Tax=Clostri... 238 2e-61 UniRef50_B1HWF0 Prophage Lp3 protein 1, integrase n=1 Tax=Lysini... 238 3e-61 UniRef50_C4RGE0 Integrase n=1 Tax=Micromonospora sp. ATCC 39149 ... 237 4e-61 UniRef50_A5TWD8 Possible integrase n=3 Tax=Fusobacterium RepID=A... 237 6e-61 UniRef50_C5CAV2 Site-specific recombinase, integrase family n=1 ... 236 7e-61 UniRef50_B6FZV4 Putative uncharacterized protein n=1 Tax=Clostri... 236 8e-61 UniRef50_C2F0I9 Transposon integrase n=3 Tax=Firmicutes RepID=C2... 236 8e-61 UniRef50_Q636X3 Phage integrase n=18 Tax=Bacillales RepID=Q636X3... 236 1e-60 UniRef50_C7N7P7 Site-specific recombinase XerD n=3 Tax=Bacteria ... 236 1e-60 UniRef50_D0DRR6 Site-specific recombinase n=1 Tax=Lactobacillus ... 236 1e-60 UniRef50_A4G7G1 Putative integrase n=1 Tax=Herminiimonas arsenic... 236 1e-60 Sequences not found previously or not previously below threshold: >UniRef50_P76168 Putative lambdoid prophage Qin defective integrase (Fragment) n=64 Tax=root RepID=INTQ_ECOLI Length = 385 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 385/385 (100%), Positives = 385/385 (100%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL Sbjct: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN Sbjct: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW Sbjct: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAID 240 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAID Sbjct: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAID 240 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW Sbjct: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN Sbjct: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 Query: 361 AQVALLNTQLSEFAPTMPHNEAMKN 385 AQVALLNTQLSEFAPTMPHNEAMKN Sbjct: 361 AQVALLNTQLSEFAPTMPHNEAMKN 385 >UniRef50_UPI0001826473 putative integrase n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826473 Length = 431 Score = 364 bits (936), Expect = 3e-99, Method: Composition-based stats. Identities = 218/385 (56%), Positives = 288/385 (74%), Gaps = 1/385 (0%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 GELR+SVC++IKTG F+YA QFP S NL +FG +++T+ ELA K+L LK E++ ++ Sbjct: 45 GELRASVCFSIKTGSFNYAAQFPDSPNLRRFGMESKEITVLELANKWLELKRMEISTNAM 104 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 + Y ++ +N++ IG L S++ +E LL +RKELLTGY + K+ GRS TVNN Sbjct: 105 SRYSSIARNMVPRIGGDRLVSAVTQEDLLFIRKELLTGYHVLKTGQKTPVKGRSVRTVNN 164 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 YM ++ +F F D+GY+ NPF GIS LK +RT PDPL+REEFIR+I+AC +QQ KN+W Sbjct: 165 YMRTMSGMFNFAADSGYVKANPFNGISLLKRARTEPDPLTREEFIRMINACTHQQLKNMW 224 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR-FTVPKTQAGTNRVIHLIKPAI 239 ++VYTGVR GEL AL WEDIDLK GTM+IRRN + FT+PKT+AGT+R+I+LI+PAI Sbjct: 225 SLAVYTGVRHGELVALAWEDIDLKAGTMIIRRNHTLTKEFTLPKTEAGTDRIINLIQPAI 284 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 D L+SQ +TRL K+H I+V REYGR+ CTFVF P++ +R G+H+ V SI Q Sbjct: 285 DVLKSQAEMTRLGKQHQIEVKLREYGRSVAHPCTFVFNPQIVSRNSLAGNHYAVGSINQS 344 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 W++A++RAG+R+RK+YQSRHTYACWSL AGANP FIA QMGH DAQMV++VYG WM+ENN Sbjct: 345 WESAMRRAGIRYRKAYQSRHTYACWSLAAGANPNFIAKQMGHTDAQMVYRVYGSWMAENN 404 Query: 360 NAQVALLNTQLSEFAPTMPHNEAMK 384 QV +LN +LSEFAP+MPH Sbjct: 405 QDQVLILNQKLSEFAPSMPHATGSD 429 >UniRef50_B6XGP6 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XGP6_9ENTR Length = 427 Score = 339 bits (871), Expect = 9e-92, Method: Composition-based stats. Identities = 180/385 (46%), Positives = 257/385 (66%), Gaps = 6/385 (1%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 GELR+++CY IKTG FDY+ +FP S+N + + +++T +A K++ LK EVA ++ Sbjct: 44 GELRTAICYKIKTGAFDYSVEFPESKNCNEKSISNKNVTFGYVANKWVELKRIEVAVSTF 103 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 Y++++ + I + + + N E +L VR ++LT I N V++ GRS TVNN Sbjct: 104 EAYKSIVNVLFFFIDKNKMINLFNLEDILSVRNKMLTSPTIEPVNR-VSKIGRSVSTVNN 162 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 YM LN +F F +N Y+ N I LK+SR +PDP+++EEF RL++A RN QAKN+ Sbjct: 163 YMKILNCIFCFAAENKYIETNVLSSIKNLKKSRAVPDPITKEEFPRLLNATRNIQAKNML 222 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK-DRFTVPKTQAGTNRVIHLIKPAI 239 VSVYTG+RPGELCAL +EDID T+ ++RN++ F++PKT + T+RVIH++ P Sbjct: 223 IVSVYTGLRPGELCALAYEDIDFIERTITVKRNISNIGDFSLPKTPSSTDRVIHMLDPVY 282 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 ++LR QM+LTR++ I++V REYG+ + CTFVFQP V AR H++ + Sbjct: 283 ESLREQMSLTRMTSPEIVNVEMREYGKYREDSCTFVFQPSVVARNGLETKHYSPGGFNGI 342 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 W A IKR+G+RHRKSYQ+RHTYACW L+AGANPAFIA QMGH+ A+M++ VYG WM EN+ Sbjct: 343 WGALIKRSGVRHRKSYQTRHTYACWMLSAGANPAFIATQMGHSSAKMIYDVYGAWMKEND 402 Query: 360 NAQVALLNTQLSEFAPTMPHNEAMK 384 Q+A++N AP MPH K Sbjct: 403 KDQIAIMNR----NAPHMPHPIESK 423 >UniRef50_Q2RHJ2 Phage integrase n=3 Tax=Firmicutes RepID=Q2RHJ2_MOOTA Length = 390 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 70/387 (18%), Positives = 148/387 (38%), Gaps = 38/387 (9%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLNT 62 R ++ K V + Q + F E +T+++ ++L + + +++ + Sbjct: 36 RLTLYGKSKKEVLEKLTQALYQQQNGGFIE-PSKITVEQWLNRWLTDYAKPHLRQSTWES 94 Query: 63 YRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 Y V++ +++ +G L + + + L + G S V Sbjct: 95 YETVLRLHVIPTLGSIPL-KKLQPADIQRLYASKL-------------ESGLSPTRVRYI 140 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWC 181 L+ ++G L NP + P + + PL+ E+ R ++ + + Sbjct: 141 HVVLHEAMSQARESGLLLQNPTEAAKPPRHPKKKVQPLNPEQVKRFLETAKQDPLYPAFL 200 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHLIKP 237 +++ TG+R GE+ L W+D+DL+ G + +R++L + R F PKT+ + R I L Sbjct: 201 LALGTGLRRGEILGLRWQDLDLQKGILQVRQSLIRTREGLKFEEPKTEK-SRRQIPLPPS 259 Query: 238 AIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIR 297 + AL+ +K + + + VF G Sbjct: 260 VVAALKRHKAWVNQNKLILGPDY---------EDHDLVFP-------VENGRPRDPKGFA 303 Query: 298 QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 + ++ + +AGL H + + RHT+A L G +P + ++GH+ + +Y + Sbjct: 304 EYFNRLLDKAGLPHIRLHDLRHTHATLLLLEGVHPKVVQERLGHSTVSITLDIYSHILPG 363 Query: 358 NNNAQVALLNTQLSEFAPTMPHNEAMK 384 ++ L P +K Sbjct: 364 LQEKAAERIDGLLQPKENPSPKEGTIK 390 >UniRef50_A8GE25 Integrase family protein n=18 Tax=Enterobacteriaceae RepID=A8GE25_SERP5 Length = 428 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 179/386 (46%), Positives = 263/386 (68%), Gaps = 5/386 (1%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 GELR+SVCY IKTG F Y K+FP+SRN+ AR+++T+ ++ +K+L LKE EV+K +L Sbjct: 43 GELRTSVCYEIKTGNFSYEKRFPNSRNVT-INAARENITVNDIIKKWLNLKEMEVSKGTL 101 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPK--SNYIVTQPGRSAVTV 118 Y + S + + + I +E +L RK +LT Q PK + GR+ TV Sbjct: 102 YRYTSHCGVTASYLNPERKINEIRQEDILLARKRMLTEPQQPKIHEKRKSVRQGRAVPTV 161 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKN 178 N+YM + A+F F V NGY+A+NPF+G+SPLK+ R PDPL++EE+ R+I +C QQ +N Sbjct: 162 NSYMFCMRAIFDFAVSNGYIANNPFEGVSPLKKQRPAPDPLTKEEYQRVIVSCPTQQMRN 221 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-KDRFTVPKTQAGTNRVIHLIKP 237 + +++ TG+R GEL AL WED+D +N T+ I RNL+ K+ FT+PKT AG R I L Sbjct: 222 MITLAINTGLRHGELYALAWEDLDTQNWTISISRNLSLKEHFTLPKTDAGM-RTIQLTTV 280 Query: 238 AIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIR 297 AI+A++SQM LTRLS H + V+ REYG+ CTF+F P +++R + D ++ + Sbjct: 281 AIEAIKSQMALTRLSNAHRVTVNLREYGKKRTDDCTFIFSPRITSRNGSSADWYSPGAFN 340 Query: 298 QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 W +++AG++HRKSY++RHT+ACW+L+ GANP F+A+QMGH+ AQM++ VYGKWM+E Sbjct: 341 GAWKTILRKAGVKHRKSYETRHTFACWALSCGANPNFVAHQMGHSSAQMLYNVYGKWMTE 400 Query: 358 NNNAQVALLNTQLSEFAPTMPHNEAM 383 NN+ QV +LN S+ AP +PH + + Sbjct: 401 NNDHQVNILNASFSQNAPQVPHEQII 426 >UniRef50_A2P3A8 Integrase n=3 Tax=Vibrionaceae RepID=A2P3A8_VIBCH Length = 412 Score = 327 bits (839), Expect = 5e-88, Method: Composition-based stats. Identities = 160/385 (41%), Positives = 234/385 (60%), Gaps = 21/385 (5%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 R+++C+AI+TG F Y + FP S+ ++ + ++D+TIKEL +++L LK EV ++ Y Sbjct: 46 RTAICHAIQTGQFIYKEWFPESKKANQYSD-KKDITIKELFDRWLDLKVIEVTPATIKNY 104 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 + +K + + E L S + +EKLLE+RK S T N YM Sbjct: 105 QQRVKQVYWHLPETTLVSEVTQEKLLELRKRF--------------TETCSPSTANTYMR 150 Query: 124 NLNAVFQFGVDNGYLADNPF--KGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWC 181 L +F F +++GY +P GI LK + P PLS EEF R+I+ C+++Q N W Sbjct: 151 TLKGIFSFAINSGY--SDPALLNGIKELKTQKRKPQPLSEEEFQRVIEHCQHEQDANFWT 208 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-KDRFTVPKTQAGTNRVIHLIKPAID 240 V+VYTG+R GEL AL WEDIDL+NGT+ +RRNL + RF +PKT +G R ++L+ PA+ Sbjct: 209 VAVYTGLRHGELMALAWEDIDLENGTITVRRNLTLEGRFKLPKTISG-ERTVNLLNPALA 267 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 AL++QM T + E IDV REYG+ ++Q VF P V+AR + ++ SI + W Sbjct: 268 ALKAQMKWTFMLPELEIDVLQREYGKLQRQFIRPVFSPSVTARYEVDNRYYHHVSIWEKW 327 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 + KRA L +RK YQ+RHTYACW L+AGANP FIA QMGH+ A+ V+Q YG W+ ++ Sbjct: 328 NMLCKRAKLTYRKPYQTRHTYACWMLSAGANPTFIAKQMGHSSAKEVYQTYGDWVGDHTK 387 Query: 361 AQVALLNTQLSEFAPTMPHNEAMKN 385 Q+ +LN + AP P + K+ Sbjct: 388 GQLDMLNARYGNIAPYTPQGKESKS 412 >UniRef50_B7DTQ3 Integrase family protein n=2 Tax=Bacillales RepID=B7DTQ3_9BACL Length = 392 Score = 326 bits (836), Expect = 9e-88, Method: Composition-based stats. Identities = 69/377 (18%), Positives = 138/377 (36%), Gaps = 33/377 (8%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK 68 + K + + + E T+ ++L K T+V +L +Y +++ Sbjct: 44 FKTKRDAERFLATLVEQVHDGTYVE-PSKKTVGAYLREWLDDKRTKVRPGTLRSYVWLVE 102 Query: 69 NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAV 128 + ++ I + +L ++R + S +V + L+ Sbjct: 103 H--------HIIPRIGQLELAKLRPSHIQKLYTDLQT---GDEHISKRSVLHAHRILHQA 151 Query: 129 FQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGV 188 V G + N + P + +R + E+ + A R + + + TG+ Sbjct: 152 LDRAVKWGLITRNVTDAVEPPRPARQEMRVWTDEQLDAFLQAARKSRYYVAFVLLSSTGM 211 Query: 189 RPGELCALGWEDIDLKNGTMMIRRNLAKD----RFTVPKTQAGTNRVIHLIKPAIDALRS 244 R GE+ AL WED+DL+ G + + R+ + R PKT++G R I L +D LR Sbjct: 212 RVGEVLALRWEDVDLQAGLVRVVRSYSYTGKGYRIEEPKTESG-RRSIALPPAVVDLLRK 270 Query: 245 QMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAI 304 T + + ++ +G ++R + I Sbjct: 271 HKTEQAARRLMVGSA----------------WEDNDLVICTAFGKPILQHNLRTSFHRII 314 Query: 305 KRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVA 364 +R GL + + RHT+A L G +P + ++GH+D + Y + A Sbjct: 315 ERTGLPRIRLHDLRHTHATILLQRGVHPKVVQERLGHSDITLTLNTYSHVVPGLQEAAAR 374 Query: 365 LLNTQLSEFAPTMPHNE 381 ++ S + + +E Sbjct: 375 SIDDLFSPSSKRISTHE 391 >UniRef50_Q1AUQ4 Phage integrase n=3 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUQ4_RUBXD Length = 379 Score = 323 bits (829), Expect = 7e-87, Method: Composition-based stats. Identities = 83/381 (21%), Positives = 149/381 (39%), Gaps = 41/381 (10%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFL-ALKETEVAKTS 59 G R +V + V + S R F +A +L + E +++L E V + Sbjct: 30 GRKRKTVYGKTRAEVAKKLNKALSDREDGLFFDAG-NLKVGEYMDRWLRDSVEGNVGPRT 88 Query: 60 LNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 L Y+ ++ +I ++GE L ++ + + ++ L G + +V Sbjct: 89 LANYKLQVRRHIKPVLGEIQL-KTLTPAHVQGLYRQKLDA-------------GLAPSSV 134 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKN 178 L+ + G + N + + K D L+ EE + +DA R + + Sbjct: 135 RYIHAVLHRALTQALRWGLVPRNVSEAVDLPKLVSEEVDALTPEEARKFLDAARGDRFEA 194 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNG---TMMIRRNLAKDRFTVPKT----QAGTNRV 231 L+ V+V TG+R GEL L W DIDL T+ + R L + R + G R Sbjct: 195 LYVVAVMTGMRRGELLGLRWSDIDLGQNAPATLRVGRQLQRMRDGSGLKFVAPKGGKGRT 254 Query: 232 IHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHF 291 I L A++AL++ + K +++ E G Sbjct: 255 IRLPSRAVEALKAHRARQAEERL----------------KAGPLYRDEGLVFASEVGTPL 298 Query: 292 TVDSI-RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQV 350 +I R+ + +K+AGL + + RHT A L+ G NP F+ +GHAD ++ Sbjct: 299 EPSNIDRRSFKPLLKKAGLPDIRFHDLRHTCATVLLSQGVNPKFVQELLGHADIKLTLGT 358 Query: 351 YGKWMSENNNAQVALLNTQLS 371 Y ++ + + + L Sbjct: 359 YSHFLPSMGDQTANAMESALG 379 >UniRef50_B0KAZ5 Phage integrase family protein n=3 Tax=Thermoanaerobacter RepID=B0KAZ5_THEP3 Length = 403 Score = 320 bits (820), Expect = 6e-86, Method: Composition-based stats. Identities = 82/379 (21%), Positives = 146/379 (38%), Gaps = 29/379 (7%) Query: 6 SVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRA 65 ++ K Y + + ++T+K+ +K+L K++ +A + N Y Sbjct: 37 TIECKNKAEAQKYLAKKIVEYDTGTLPIDETNITVKDYLKKWLETKKSSLALKTYNDYEQ 96 Query: 66 VIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTN 124 I+ I IG L + + + +L + G SA T+ T Sbjct: 97 KIRLYINPAIGNYKLLK-LTPLIIQNMYNNML-------------EQGLSARTIRYTHTV 142 Query: 125 LNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSV 184 LN + + L NP G + K+++ L+ E+ + ++AC + L+ + + Sbjct: 143 LNEALKQAIKWQMLRYNPCDGTTLPKQAKKEMKVLTPEQAKKFLEACVYNRWGILFELLL 202 Query: 185 YTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHLIKPAID 240 +G+RP E L WEDID KN + ++R L + + PKT + R I L + ++ Sbjct: 203 ISGMRPSEALGLKWEDIDWKNNRIAVQRTLTRVKNNWQLKEPKT-PQSRRTIPLPREVMN 261 Query: 241 ALRSQMTLTRLSKEHIIDV--------HFREYGRTEKQKCTFVFQPEVSARVKNYGDHFT 292 L+ K + F+ EK K V+ G Sbjct: 262 DLKEHRKQQSKEKLKAKEYINYDKDKNKFKPEEWEEKLKDPKVYVDYGLVFATETGRPLD 321 Query: 293 VDSIRQ-MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 + +I + +K AGL + + Y RHT A L AG NP ++ ++GHA+ + Y Sbjct: 322 LANINYQYFKPLLKNAGLPNIRLYDLRHTCATLLLLAGENPKVVSERLGHANITLTLDTY 381 Query: 352 GKWMSENNNAQVALLNTQL 370 + L L Sbjct: 382 SHVLPTMQEEATQKLKQML 400 >UniRef50_C9RBE5 Integrase family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RBE5_AMMDK Length = 414 Score = 320 bits (820), Expect = 7e-86, Method: Composition-based stats. Identities = 90/381 (23%), Positives = 149/381 (39%), Gaps = 45/381 (11%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKET-EVAKTSLN 61 +R S + Q +L A LT+ E +L + ++ T+L Sbjct: 64 VRKSFYARTREEAVKKLTQALHQASLG-VLTAPARLTLGEWLATWLETYKKGKLRPTTLA 122 Query: 62 TYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 Y VI+ IL +G L S + L + L + G SA TV Sbjct: 123 NYETVIRAYILPSLGSVPLRS-VTPASLQALYNSL-------------SARGLSARTVRL 168 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP-DPLSREEFIRLIDACRNQQAKNL 179 LNA + V NG L NP + P K R +P PL+REE + A R ++ Sbjct: 169 VHVVLNACLKQAVKNGLLVRNPAEATEPPKLKRRVPVRPLAREEVEAFLKAARGERLYPA 228 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA----------KDRFTVPKTQAGTN 229 + +++ TG+R GE+ L WED+DL+ G + +RR+L + F PKT+ + Sbjct: 229 FALALKTGLRRGEVLGLKWEDVDLERGVLRVRRSLVEAKDPETGKVRLVFQEPKTEK-SR 287 Query: 230 RVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGD 289 R + L + + L+S K + + + + VF G Sbjct: 288 RTVPLTRDVVALLKSHKARQNEEKLYFGEAY---------EDNGLVF-------CTELGK 331 Query: 290 HFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQ 349 + + + + +K+AGL + + RHT+A L +G + +GH Sbjct: 332 PIWPRNFLRAFHSVLKKAGLERHRFHALRHTFATLLLASGEELKNVQELLGHERISTTAD 391 Query: 350 VYGKWMSENNNAQVALLNTQL 370 VY + + + V L+ L Sbjct: 392 VYAEVLEDAKKKAVTRLDAFL 412 >UniRef50_C8VWS4 Integrase family protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWS4_DESAS Length = 381 Score = 317 bits (812), Expect = 5e-85, Method: Composition-based stats. Identities = 76/386 (19%), Positives = 140/386 (36%), Gaps = 42/386 (10%) Query: 6 SVCYAIKTGVFDYAKQ---FPSSRNLEKFGEA------------RQDLTIKELAEKFLAL 50 S+ Y I G K F + + E + T+++ ++ Sbjct: 13 SIVYDINQGGKRKQKWESGFKTKKEAEAILAQRINEIEKGTYINPKKDTLEDYLIRWFDT 72 Query: 51 KETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVT 109 + +++ ++ Y +IK +++ +G LA + ++ E + L G + N Sbjct: 73 HKADLSPSTARRYEGIIKQHLIPSLGNIPLAK-LQPLQIQEFLSKELEGGRQD--NKKTV 129 Query: 110 QPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLID 169 G SA +VN L+ VD ++ NP + K + LS ++ RL++ Sbjct: 130 GAGLSAASVNYEYRVLHKALNQAVDWQLISRNPADLVKVPKPEKKDMVVLSEQDIARLLN 189 Query: 170 ACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR-----FTVPKT 224 ++ +++YTG+R GE+ W+DIDL G + +R+ + + F PKT Sbjct: 190 EIKDNYLYIPTFLAIYTGMRLGEVLGSTWKDIDLNRGILSVRQASCQVKADDPEFKAPKT 249 Query: 225 QAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARV 284 A + R I + + + LR K +Q Sbjct: 250 -AKSKRNIDISQTVVKTLREHKKTQTKWKLVAGSN----------------WQDNNLVCA 292 Query: 285 KNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADA 344 G S+ + R GL + RHT+A L AG P + ++GH+ Sbjct: 293 LQDGRPINPPSLSSYFRRVASRIGL-FVSFHALRHTHASLLLKAGIQPKIVQERLGHSTI 351 Query: 345 QMVFQVYGKWMSENNNAQVALLNTQL 370 + +Y M L+ L Sbjct: 352 AVTMDIYSHVMPGMQRQAANKLDDML 377 >UniRef50_B7DTD1 Integrase family protein n=2 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DTD1_9BACL Length = 379 Score = 317 bits (812), Expect = 5e-85, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 125/344 (36%), Gaps = 36/344 (10%) Query: 34 ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVR 92 A + T++ +L K ++V ++ Y +++ +I+ +G L S + + L + Sbjct: 58 AENNDTVETYLRNWLEDKRSQVRPSTYRGYEWLVRVHIIPHLGGIEL-SDLRPQHLQALY 116 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 ++L S T+ + L+ V G +A N + P + Sbjct: 117 RKL-----------QSLDKPLSNRTILHIHLLLHEALDRAVKWGMVARNVADAVDPPRPE 165 Query: 153 RTIPDPLSREEFIRLIDACRNQ--QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 + E+ + A + + ++V TG+R GE+ L W +ID + + I Sbjct: 166 VRRSIVWTPEDVRAFLSANEEAEARYYAAFVLAVMTGMRKGEILGLRWSEIDWDSAVVRI 225 Query: 211 RRNLAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 + L + PKT + R + L I ALR L + + Sbjct: 226 NQTLTWTKQGPILQEPKTD-RSRRSVALSPETIVALRRHHALQAQERLLYGTEY------ 278 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL 326 + VF + G+ ++ W A+KRA + + + RHT+A L Sbjct: 279 ---KDHDLVF-------ARPNGEPLHPRTLDNAWYRALKRANVPRIRFHDLRHTHASLLL 328 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 G +P ++ ++GH+ + Y + + + Sbjct: 329 AQGVHPKIVSERLGHSTINITLDTYSHVLPGLQKQVADRFDEVI 372 >UniRef50_D0Z3D7 Putative integrase n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z3D7_LISDA Length = 428 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 147/385 (38%), Positives = 221/385 (57%), Gaps = 7/385 (1%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQ--DLTIKELAEKFLALKETEVAKT 58 G LR+ + I G F+Y ++FP+S+N + D ++ + E FL +K E+ ++ Sbjct: 44 GRLRAVIVSEIACGKFNYLERFPNSKNTLQISVQNPHVDCSLNDFIEHFLLIKSVELTES 103 Query: 59 SLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 S+ R+ +K ++G + L S+I ++ +R +LL G S T GRS TV Sbjct: 104 SIIRTRSGLKTCAKLLGGERLISNITHADIMSMRLKLLNGSNFSPSPIRRTSNGRSVKTV 163 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACR-NQQAK 177 N Y+T +++F++ + NPF G+S L+ +T P+PL +EFIRLI+ +Q Sbjct: 164 NTYLTICSSLFKYAYRTEAIHTNPFDGVSRLRTVKTPPNPLEHDEFIRLINHPSIREQDV 223 Query: 178 NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL-AKDRFTVPKTQAGTNRVIHLIK 236 NLW V+VYTG+R GEL AL WEDIDL T+ ++R + RF VPKT++G R I+L+ Sbjct: 224 NLWTVAVYTGLRHGELSALAWEDIDLVKRTITVKRTATQQKRFRVPKTESG-ERTINLLA 282 Query: 237 PAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI 296 PA +AL Q T L ++V R+ +++CT+VF+ + + I Sbjct: 283 PAYEALVRQKACTFLYPSIAVEVESRQKRNHIQEQCTWVFRMTSYSAEAKGN--ISTKVI 340 Query: 297 RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 MW K AG+ +R YQ+RHTYACW L +GANPAFIA+QMGH+D MV VYG WM Sbjct: 341 SNMWRKCTKLAGIAYRNPYQTRHTYACWLLNSGANPAFIASQMGHSDMSMVISVYGAWMP 400 Query: 357 ENNNAQVALLNTQLSEFAPTMPHNE 381 NN +++A + QL+ AP+ PH + Sbjct: 401 SNNESEIAKIERQLNCIAPSAPHQK 425 >UniRef50_B9MQ70 Integrase family protein n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MQ70_ANATD Length = 325 Score = 311 bits (797), Expect = 4e-83, Method: Composition-based stats. Identities = 70/347 (20%), Positives = 128/347 (36%), Gaps = 44/347 (12%) Query: 38 LTIKELAEKFLAL-KETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKEL 95 LT + + ++ + ++ T+ ++Y +I K+I +G L +++ + E L Sbjct: 11 LTFSQWLDIWMNQFMKIKLRPTTYSSYIQLINKHIKPKLGHIQL-QNLSPLAIQECYNSL 69 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 L S TV N +++ + + GY+ N + ++ K R Sbjct: 70 L-------------LENLSPKTVKNIHVIIHSALKQAIKCGYINQNVSEAVALPKVERPE 116 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 LS E+ + A + + + +YTG+R GEL L W+DID N T+ ++R+L Sbjct: 117 IKTLSSEQVTTFLQAAQTDSLYPAFLLELYTGLRRGELLGLKWDDIDFDNCTIHVKRSLV 176 Query: 216 KDR----------FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 + PKT+AG RVI + + L+ + K Sbjct: 177 RVYDHNLKKTTLLLQPPKTKAG-YRVIPIPDFVVAELKELYEEHQRIKL----------- 224 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWS 325 F V G + + + +K+A L + + + RHT A Sbjct: 225 ------SQPNFNSLNLMFVTTQGTPIDPRNFERKFKQLLKKANLPNIRLHDLRHTVATLL 278 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 L +P + +GH D +Y E + L L+ Sbjct: 279 LQQNVHPKIVQEILGHRDISTTLDIYSHVNIELKKKATSCLVEILNS 325 >UniRef50_B1VP49 Putative phage integrase n=1 Tax=Streptomyces griseus subsp. griseus NBRC 13350 RepID=B1VP49_STRGG Length = 423 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 88/404 (21%), Positives = 141/404 (34%), Gaps = 40/404 (9%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEK--FGEARQDLTIKELAEKFLALKETE-VAKT 58 R + V A Q + + + A + + +LA E + Sbjct: 33 RTRKFAYGKTREEV---ASQLTEMQEMTRQGIPAASSTMAFGDYLTYWLATIAPERLKPA 89 Query: 59 SLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKEL-------LTGYQIPKSNYIVT- 109 +LN+Y + + I +G+K L + ++ + E L G + T Sbjct: 90 TLNSYEGLSRLYIRPALGKKRL-NRLSPADVRRFLAEFKAACLCCLRGADEERPEDKRTC 148 Query: 110 -------QPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSRE 162 + SA TV L + Q + +A N + + PL Sbjct: 149 CAVGRCCKRRPSARTVQYIHAVLRSALQQAIREELIARNVARIVETPTVEPKEVRPLDAA 208 Query: 163 EFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR---- 218 E L+ R + LW + V TG+R GE L W D+DL GT+ +RRN+ + R Sbjct: 209 EVRLLLKTARPHRLYALWLLLVSTGLRRGEALGLTWADVDLTAGTLRVRRNVQRIRRELI 268 Query: 219 FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQP 278 F PKT + R I L K + AL + T ++ ++ +T Q VF Sbjct: 269 FGTPKTM-RSVRTISLPKSCVQALTAHRTQQEREQKVAG----AKWQQTPGQPAGLVFT- 322 Query: 279 EVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQ 338 G S+ +M + A +R + + RHT A L G + I Sbjct: 323 ------TLTGRVTDPRSLNRMLTILCRDAKVRRVRVHDLRHTCASLLLAQGVDARTIMET 376 Query: 339 MGHADAQMVFQVYGKWMSENNNAQVALLNTQLS-EFAPTMPHNE 381 +GH+ M Y M A ++ L E P E Sbjct: 377 LGHSTITMTLDTYAHVMGSTLRAAAEQMDDALGLEDVDDDPEGE 420 >UniRef50_D1CFY4 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFY4_THET1 Length = 363 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 87/359 (24%), Positives = 147/359 (40%), Gaps = 34/359 (9%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNT 62 +R S+ + V ++ ++ + AR +T+ E +L + + +V +L Sbjct: 25 VRHSITGKTRAEVQRKRRELLAAADQG-IMPARTRVTVAEFLSHWLEIIKPQVRPATLAD 83 Query: 63 YRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 Y+ ++ +I+ +G L + L E+ +LL G SA TV N Sbjct: 84 YQNSVRNHIVPALGTIKLTK-LEPAHLQELYSQLLA-------------KGLSAKTVRNI 129 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWC 181 ++ + G L N P K SR L+ E+ L+ AC + + L Sbjct: 130 HGTIHKAIKDAARWGMLPRNVADIARPPKVSRQELQCLTPEQVRLLMQACAGTRYEPLLG 189 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK-DRFTVPKTQAGTNRVIHLIKPAID 240 +++ TG R GEL L W DIDL+ G + I R L + F+ PKT +G R +H+ ++ Sbjct: 190 LAIATGARQGELLGLRWADIDLQRGVVQITRQLTRQGTFSEPKTSSGK-RSVHVPVSTVE 248 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 LR +L + D Q VF G ++ + W Sbjct: 249 LLRRHRSLQLQERLSAGD---------RWQDQGLVFANT-------LGGPMDARNLIRAW 292 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 +++AGL + RHT A L G +P I ++GHAD + QVY + + + Sbjct: 293 HRILQQAGLPRMPFHSLRHTSASLLLRQGVSPRLIQQRLGHADIAVTLQVYAHLVEDMD 351 >UniRef50_B9MR26 Integrase family protein n=2 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MR26_ANATD Length = 400 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 87/390 (22%), Positives = 146/390 (37%), Gaps = 55/390 (14%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFL-ALKETEVAKTS 59 G+ R V I + D A T+K+ +L K+ + ++ Sbjct: 44 GKTRQEVAEKIAKTLNDLA---------NGVYVDPAKTTLKDWLNTWLWEYKKQTLRPST 94 Query: 60 LNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 Y I E+++ +I KL ++R E L K Q G S T+ Sbjct: 95 FKDYLCYI--------ERHINPAIGHYKLKDLRPEHLQALYNAKY-----QEGLSISTIK 141 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLK-ESRTIPDPLSREEFIRLIDACRNQQAKN 178 T L++ + NG + N + + K + + LS EE R I A ++ K Sbjct: 142 QIHTVLHSALDQALKNGLVNRNVSEATTLPKGKPKREIRILSLEEQQRFIAALEGERLKT 201 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRF-------------TVPKTQ 225 + V + +G+R GEL AL W+D++ K+G + +RR+L + R PKT+ Sbjct: 202 AFLVELASGLRIGELLALRWKDVNFKDGYIEVRRSLQRVRIFDGGNSKKTALAFQEPKTE 261 Query: 226 AGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVK 285 AG R++ L I+ L+ K ++ + VF Sbjct: 262 AGK-RIVPLPPVIIEELKQHRKKQLEEKLKAGALY---------EDNDLVF-------AT 304 Query: 286 NYGDHFTVDSIRQMWDAAIKRAGL-RHRKSYQSRHTYACWSLTAGANPAFIANQMGHADA 344 G + +++ ++AGL + + RHTYA L A +P + +GH D Sbjct: 305 ELGTPIDPRNFERLFYRIREKAGLDKSVNFHALRHTYATRLLEANEHPKVVQELLGHKDI 364 Query: 345 QMVFQVYGKWMSENNNAQVALLNTQLSEFA 374 +Y M E A LN+ Sbjct: 365 STTLNIYSHVMPEIKKAAAMKLNSLFENIK 394 >UniRef50_B0PGN2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PGN2_9FIRM Length = 526 Score = 307 bits (787), Expect = 5e-82, Method: Composition-based stats. Identities = 71/381 (18%), Positives = 145/381 (38%), Gaps = 36/381 (9%) Query: 7 VCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLNTYR- 64 V K + KQ + K + R ++ E + + + ++ T+ Y Sbjct: 39 VLAKTKRECQEKLKQLRETMTGSKTEKVRPEMPFGEWLDFWYQNYVKPQIRPTTQANYEA 98 Query: 65 AVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTN 124 + ++I+ +G+ L + + ++ L + + T ++ ++ G S V Sbjct: 99 KIYQHIIPELGKIPL-NQLAQKDLQQFYARMKTAGRLIRTEQF--GKGLSDSMVRGLHAA 155 Query: 125 LNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSV 184 + + V G + NP G + L REE R + + + L+ + + Sbjct: 156 CRSALEKAVQEGLIRTNPAVGCKLPPKRGREMQVLGREELQRFLIQAQAEGYFELFLLDL 215 Query: 185 YTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHLIKPAID 240 TG+R GEL AL W+D+D + G + + + + + + +VPKT+A R++ L ++ Sbjct: 216 CTGLRRGELLALQWDDLDFRTGALTVNKQVYEVKGRLQVSVPKTRASIRRLV-LPPGVVE 274 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 LR+ ++F V V T ++R+ Sbjct: 275 VLRAYRETV---------------------DSRWMFPSPVKEDV-----PMTPGAVRRRL 308 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 ++RAG + + + RHT+A SL G + ++ +GH A +Y + + Sbjct: 309 QIILERAGCKRIRFHDLRHTFATLSLENGMDVKTLSAMLGHVSAATTLDIYTHVTGDMQS 368 Query: 361 AQVALLNTQLSEFAPTMPHNE 381 A ++ L E Sbjct: 369 EAAAKIDRGLGNEVREESAQE 389 >UniRef50_C1XYN2 Site-specific recombinase XerD n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XYN2_9DEIN Length = 387 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 74/373 (19%), Positives = 136/373 (36%), Gaps = 26/373 (6%) Query: 8 CYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVI 67 + + + +T+KE E++L E V T+ Y+ + Sbjct: 32 YAKTRKEAAKKLAELLVA-YGRNLLPDPDRITLKEFCERWLTSVEHRVKPTTHYGYKVAL 90 Query: 68 -KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLN 126 K+ + I+G+ + + L + +LL P + S TV L+ Sbjct: 91 EKHAIPILGDIAV-QRLQPLHLTHLYADLLKKRIHPNDPKRL--KTLSPTTVRLVHRTLH 147 Query: 127 AVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYT 186 A + V G L NP + P + R + + EE R + ++ + L+ +++ T Sbjct: 148 AALEDAVRWGLLPWNPADRVKPPQAPRYTGEVWTPEEVWRFLAEAQHSRLYALFFLALMT 207 Query: 187 GVRPGELCALGWEDIDLKNGTMMIRRNLAKD----RFTVPKTQAGTNRVIHLIKPAIDAL 242 G+R GEL L W DID + G + +R+NL K PKT + R + + ++ L Sbjct: 208 GMRRGELLGLKWADIDWQEGAIWVRQNLTKAGSKRVVQSPKTYRSS-RPVDVSSDVLEVL 266 Query: 243 RSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDA 302 + + I D + E + G ++R+ + A Sbjct: 267 QQHREQQEKDRLGIGDA----------------WTDEGWVFTTSVGTPIEPSNLRREFLA 310 Query: 303 AIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQ 362 IKRA ++ + + R T+ AG +P ++ ++GHA Q Y Sbjct: 311 IIKRAKVKEIRFHDLRDTHVSLLALAGVDPKVVSERVGHASVAFTQQTYQHLFRAQRKKA 370 Query: 363 VALLNTQLSEFAP 375 + L Sbjct: 371 ALAVGELLGPRED 383 >UniRef50_D2LSV7 Integrase family protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSV7_BACS4 Length = 391 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 68/378 (17%), Positives = 146/378 (38%), Gaps = 28/378 (7%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLNT 62 R ++ KT +F + ++ + + K+ +++ + +L T Sbjct: 31 RKTITAKNKTEAKKRLAEFVTEIEAGEYID-PSKMKFKDFVKEWETKYGMKHLGAKTLET 89 Query: 63 YRAVIKNI-LSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 Y+++I N + G K L ++ L + + G S+ ++ + Sbjct: 90 YKSIINNYLIPTFGNKKL-DEFKPINIINYLDCL----GEDNARKDGKEGGLSSSSIKYH 144 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQA--KNL 179 L +F + + +NP + + P K ++ +++E I L++ +N+ K + Sbjct: 145 YRVLRNIFSRAKEWIIIKNNPVESVKPPKVTQEKTSVYTKDEVIELLELLKNEPIHQKLM 204 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTV----PKTQAGTNRVIHLI 235 ++ G+R GE+ L W+DIDL GT+ I +L + P + R + + Sbjct: 205 VTAALMAGLRRGEILGLQWDDIDLDAGTISINHSLQYTKEKGYVLGPPKNNSSIRKVSIP 264 Query: 236 KPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDS 295 ++ + + ++ E K +VF G F + Sbjct: 265 MYLVEEFKKYKRTKSKERIQAAEL-------WEGGKYFYVFSS-------WNGKPFYPTA 310 Query: 296 IRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 + W +KR G ++ + + RHT A + G + I+ ++GHAD + +YG ++ Sbjct: 311 VGTWWRRFLKRKGFKYIRFHDLRHTAATLLINEGEHAKTISARLGHADIKTTMNIYGHYL 370 Query: 356 SENNNAQVALLNTQLSEF 373 E + LN+ Sbjct: 371 READEKAANKLNSIFGNT 388 >UniRef50_B1B8Q2 Phage integrase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B8Q2_CLOBO Length = 366 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 130/348 (37%), Gaps = 38/348 (10%) Query: 28 LEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKE 86 + +T+KE E +L + + ++ Y+ IK+I++ IG+ L S +N Sbjct: 52 EKGSIITNDKMTVKEYIEYWLETYPKNNCSPSTYKRYKFFIKDIINYIGKHKL-SKLNPM 110 Query: 87 KLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGI 146 + + ++LL + S TV L+ + + +NP + Sbjct: 111 IIQKFYEDLL------------SDRNISNNTVIKTHRMLHLALKHAQQWQLINNNPCDLV 158 Query: 147 SPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNG 206 +P K ++ +E +D + + +++ TG R GELCA+ W D+DL + Sbjct: 159 TPPKATKQEMKYWQPDEINIYLDILKEEFLYPAIFLAIQTGCRVGELCAIKWSDVDLIDK 218 Query: 207 TMMIRRNLAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFR 262 T+ I + L + PKTQ + R I L++ AI L++ K Sbjct: 219 TIRIDKTLQRIDCKLALKYPKTQN-SIRTITLLETAITFLKNLKKNRIEKKLKYGIEL-- 275 Query: 263 EYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYA 322 G I Q + + + L + + RH++A Sbjct: 276 -----------------DYVLCWEDGRPIDPHYISQHFPKLLDKYNLPKIRFHDLRHSHA 318 Query: 323 CWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 L AG N I+ ++GH+ Y ++ +++ + L Sbjct: 319 TLLLKAGVNAKIISKRLGHSTVAFTLDTYSHVSTKMQKEEMSKVENLL 366 >UniRef50_B4BIA4 Integrase family protein n=2 Tax=Geobacillus RepID=B4BIA4_9BACI Length = 384 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 61/369 (16%), Positives = 129/369 (34%), Gaps = 39/369 (10%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLAL-KETEVAKTSLNTYRAVI 67 + KT + + + + + + E++ + V T+ + VI Sbjct: 38 FRTKTEAKKELLKIKNQVDDGSYFKESTED-FSMFMERWFNTSYKRTVEITTAKSREYVI 96 Query: 68 K-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLN 126 + +I+ K + + I + + L G S + LN Sbjct: 97 RNHIMKYFQHKKI-NEITTFDIDSFYVDKLDT-------------GYSGAYIRQMHNLLN 142 Query: 127 AVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYT 186 F V + NP K P K + +E R ++ ++ + + ++++T Sbjct: 143 QAFDQAVKWSLVKVNPVKNAKPPKVKSEEKITWTVDEVNRFLNLIKDSSMEIPYLLAIFT 202 Query: 187 GVRPGELCALGWEDIDLKNGTMMIRRNLAKD-----RFTVPKTQAGTNRVIHLIKPAIDA 241 G+R GE+ L W+D+D +N + I+R+L F PKT+ + R I + + ++ Sbjct: 203 GMRRGEVLGLKWDDVDFENKKIRIKRSLCFVSGKGLIFKEPKTK-KSKRQISISQHVVNV 261 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWD 301 L+ KE + +Q + G ++ + + Sbjct: 262 LKKHKQKQEFQKEKLGVQ----------------YQDNNLIVCTDDGKPLDPRNLLRQFY 305 Query: 302 AAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNA 361 I+ A + + RHT+A + G NP ++ ++GH+ + +Y + Sbjct: 306 RLIEEANVPRISFHDLRHTHATILMQQGENPKVVSERLGHSRVGITLDLYSHVSDDLQEQ 365 Query: 362 QVALLNTQL 370 L Sbjct: 366 AAEKFENAL 374 >UniRef50_A8L4Q7 Integrase family protein n=9 Tax=Actinomycetales RepID=A8L4Q7_FRASN Length = 477 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 65/375 (17%), Positives = 132/375 (35%), Gaps = 36/375 (9%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETE-VAKTSL 60 R +V + + + + L + T+ ++L +KE + ++L Sbjct: 115 RSRKTVYGKTEKECREKLTKVQRAAELG-VNVTAERRTVAVWLGEWLDIKEGDGTRASTL 173 Query: 61 NTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 YR +I +I+ +IG L + + + + G SA +V Sbjct: 174 RAYRWLINMHIVPVIGRVQL-DKLTPLDVRRLVAS-------------AKKSGLSAGSVR 219 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNL 179 + + + +A N K + L EE RL++ R ++ + + Sbjct: 220 HVHSLIRNALAEAERLDLVARNVAKAVKAPPTPHREVRALRPEEARRLVEVLRGERLEAV 279 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFT---VPKTQAGTNRVIHLIK 236 + + G+R GE+ L W D+DL T+ +R+ L + + VP ++R + + Sbjct: 280 FACGLMLGLRRGEILGLRWSDVDLDGATLHVRQTLQRVDGSLMFVPAKTERSHRRLPIPP 339 Query: 237 PAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI 296 + LR + + D + VF + G ++ Sbjct: 340 KLVTILRRHRATQTAERTGLGDA---------WTETGLVFTSSI-------GTPLEPRNV 383 Query: 297 RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 + +D ++AGL + + RH +A G + +GH+ Q+ Y M Sbjct: 384 NRRFDVLRRQAGLPWLRLHDLRHAFASMLFAEGVPARTVMELLGHSTIQLTMNTYTHVMP 443 Query: 357 ENNNAQVALLNTQLS 371 E V L+ + Sbjct: 444 ETQRDAVGRLDRIFN 458 >UniRef50_A4XMZ7 Phage integrase family protein n=3 Tax=Clostridia RepID=A4XMZ7_CALS8 Length = 327 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 76/351 (21%), Positives = 137/351 (39%), Gaps = 46/351 (13%) Query: 38 LTIKELAEKFL-ALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELL 96 + +K+ +L K+ + ++ Y ++I N ++ SI KL ++R E L Sbjct: 1 MLVKDWLNTWLWEYKKQTLRPSTFQDYESLINN--------HIVPSIGHYKLKDLRPEHL 52 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK-ESRTI 155 K + G S T+ + L++ + NG + N + + K +++ Sbjct: 53 QALYNSK-----HESGLSLSTIKHIHVILHSALDQALKNGLVVRNVSEATTLPKAKTKKE 107 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 L+ EE R + A ++ K + +++ +GVR GEL AL W+ ++LK GT+ I+R+L Sbjct: 108 IRVLTLEEQKRFVAALEGERLKPAFLLALASGVRLGELLALKWDCVNLKEGTITIKRSLR 167 Query: 216 KDR-------------FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFR 262 + + F PKT AG R I + ++ L+ K Sbjct: 168 RIKTYDKSLPTKTMLAFQEPKTAAGI-RTIPVPPVILEELKEHRKRQLEEKL-------- 218 Query: 263 EYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYA 322 K +++ G + +++ I++A L + RHTYA Sbjct: 219 --------KAGSLYEDNNLVFATELGTPIEPRNFLRVFYRIIEKANL-DINFHALRHTYA 269 Query: 323 CWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEF 373 L A +P + +GH D +Y M E A LN Sbjct: 270 TRLLEANEHPKVVQELLGHNDISTTLNIYSHVMPEIKKAAAMKLNNLFENI 320 >UniRef50_B8I354 Integrase family protein n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I354_CLOCE Length = 413 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 77/371 (20%), Positives = 150/371 (40%), Gaps = 20/371 (5%) Query: 22 FPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLA 80 F + E +T+ E E +L K+ + + Y ++K +L ++G+ + Sbjct: 55 FEEEVKSGSYYE-PTKMTMSEFIELWLDKKKNNIESKTHQGYSGLLKGRVLKVMGDTKII 113 Query: 81 SSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLAD 140 + L+ + L + S ++ +Y LNA+F GV G + + Sbjct: 114 D-LKPLHLINFYENLQELGIREDGR----EGKLSTNSILHYHRALNAMFGDGVRWGLIKE 168 Query: 141 NPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQA--KNLWCVSVYTGVRPGELCALGW 198 NP + P K + L ++ +LI A N+ + + TG+R GELC L W Sbjct: 169 NPCSKVRPPKVVKKEMSCLDEDQIPQLISALCNEPIDISTFITLDLVTGLRRGELCGLQW 228 Query: 199 EDIDLKNGTMMIRRNLAKD-----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSK 253 ++++LK+ T+++ + ++ PKT+ + R I + K D L K Sbjct: 229 DNVNLKDNTIVVEQAVSYTPETGTIIKTPKTK-SSIRKITIPKTTSDLLSIYRKWWLEQK 287 Query: 254 EHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRK 313 + D +++ R E +K ++ G D++ + + IKR L + Sbjct: 288 IKVGD-QWQKSAREEVEKNGQTWEDPEYLFTTWDGYVMHPDTLTKTFKKFIKRNNLPDIR 346 Query: 314 SYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEF 373 + RHT A + AG N +A +MGH + + +Y + + ++ + Sbjct: 347 LHDLRHTAATMLIHAGLNIRAVAARMGHENPNVTLAIYSHALLSADKQAADVMGNLI--- 403 Query: 374 APTMPHNEAMK 384 P NE ++ Sbjct: 404 -KKKPQNEKVE 413 >UniRef50_Q3Z840 Site-specific recombinase, phage integrase family n=6 Tax=Bacteria RepID=Q3Z840_DEHE1 Length = 435 Score = 300 bits (768), Expect = 6e-80, Method: Composition-based stats. Identities = 70/381 (18%), Positives = 139/381 (36%), Gaps = 32/381 (8%) Query: 11 IKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLNTY-RAVIK 68 K ++ ++++ F + L+ E E + + + + + +Y + +I Sbjct: 38 TKKEADKKLRELLTAQDNGIFVKQ-SKLSFGEWLENWCRDYVKIQTTQRTFESYYQNIIG 96 Query: 69 NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAV 128 +I +G+ + + + + + L + + G SA +V ++ Sbjct: 97 HIEPALGKV-ILTELTPQIIQAYYARQLEKGRAD------GKGGLSARSVLYQHRIISKC 149 Query: 129 FQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGV 188 + G + NP + P + +T ++E RL+DA +C+ +Y G+ Sbjct: 150 LKQATKLGLIMRNPADAVEPPRPRKTAISVPDKDELPRLLDAFETTPYYVFYCLLLYCGM 209 Query: 189 RPGELCALGWEDIDLKNGTMMIRRNL-----AKDRFTVPKTQAGTNRVIHLIKPAIDALR 243 R GE AL W+DIDLK T+ I + PKT + R I + L Sbjct: 210 RRGEALALRWKDIDLKQDTIQIAETAFTLRSGEYVIKEPKT-PHSRRCIDIPPTMKLLLL 268 Query: 244 SQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAA 303 + FVF + G+ +++ + A Sbjct: 269 EYKADQTAYYAKLGVELGL---------HDFVFT-------RPNGEPLNPNTVTHTFLKA 312 Query: 304 IKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQV 363 +++AG + + RH +A L AG +P ++ ++GHA + Y M V Sbjct: 313 VRKAGFDKLRLHDLRHLHATLMLQAGIHPKIVSERLGHASINITLDTYSHVMPGLQKKAV 372 Query: 364 ALLNTQLSEFAPTMPHNEAMK 384 + + LS ++ N K Sbjct: 373 NVFDKMLSANEESLEENSVSK 393 >UniRef50_D1C8V1 Integrase family protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8V1_SPHTD Length = 376 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 71/376 (18%), Positives = 131/376 (34%), Gaps = 39/376 (10%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLAL-KETEVAKTSL 60 R S + V D + + + T+K+ E++L + + Sbjct: 32 RRRKSFYGRTRQEVADKLARALVEQQYG-LPVVSERETVKDYLERWLEDVARPSLRPRTY 90 Query: 61 NTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 +YR +I +++ +G LA ++ +++ + G S TV Sbjct: 91 ESYRGIITRHLTPALGRTRLAR-LSPDQVQRYINQ-------------KQAAGLSPRTVT 136 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNL 179 + L + G ++ N +P K+ R L+ EE +D + + L Sbjct: 137 YHRAVLRKALNDAMRWGLVSRNAAALAAPPKQDRPPARFLTPEEARHFLDTVAGHRLEAL 196 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD----RFTVPKTQAGTNRVIHLI 235 + V++ G+R GE L W+D+DL+ GT+ +R L + PKTQ + R + L Sbjct: 197 FTVALAVGLRQGEALGLRWDDVDLEAGTLTVRYALQRSGGALVLVEPKTQ-RSRRTVALP 255 Query: 236 KPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDS 295 A+ ALR T + FVF + G + Sbjct: 256 AVALRALREHRTRQLEERIAA----------PYWDDQGFVFTSTI-------GTAIDARN 298 Query: 296 IRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 + + + AGL + + RH A + G NP + +GH+ + Y Sbjct: 299 LTREFHRLRAEAGLPWLRFHDLRHGCASLLMAQGVNPRVVMEILGHSQITLTLGTYSHVA 358 Query: 356 SENNNAQVALLNTQLS 371 ++ L Sbjct: 359 PTLARDAADKIDGILG 374 >UniRef50_B1RM53 Phage integrase n=4 Tax=Clostridium RepID=B1RM53_CLOPE Length = 400 Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 74/381 (19%), Positives = 144/381 (37%), Gaps = 46/381 (12%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKE-TEVAKTSLNT 62 R S K V D K F N +T+ + +L ++ +S Sbjct: 43 RKSFTGKTKKEVSDKMKDF-YVDNNRGLLPTDDKITLSKWFYTWLFTYRIHDLKPSSFER 101 Query: 63 YRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 Y + +N + +SSI K KL+++R + Y N +V++ +S T+ Sbjct: 102 YEGLYRNYIE-------SSSIGKIKLMDLRTHHIQAYY----NSLVSEERKSPSTIKTIN 150 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKE---SRTIPDPLSREEFIRLIDACRNQQAKNL 179 L + + GY+ N I+ K + I + + EE + C N + L Sbjct: 151 KCLKSCLNQALKEGYITKNYCTLITLPKGSESPKEIINIFTLEEQQTFMKECMNNKNGML 210 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-------------KDRFTVPKTQA 226 + +++ TG+R GE+ AL W DI+ KN + I + + + PKT+ Sbjct: 211 YILALGTGLRLGEILALKWTDINFKNNYIDINKAIKSTYKIDSKGNREFQIIEQQPKTKN 270 Query: 227 GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKN 286 + R + L I+ L+ + ++ I+ ++ Sbjct: 271 -SIRTVPLNDNLIELLQQHRKKQMIDRDSNIE----------------IYFDNNLVFSTP 313 Query: 287 YGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 G++ ++R+ + + + L+ + + RHT+A G P + +GH+D Sbjct: 314 IGNYLNESNVRKTFKRILNKCNLKELRFHDLRHTFATRLFENGVPPKTVQTILGHSDIST 373 Query: 347 VFQVYGKWMSENNNAQVALLN 367 +Y M + + + LN Sbjct: 374 TLNIYTHVMKDTKDKAIDKLN 394 >UniRef50_P76056 Putative lambdoid prophage Rac integrase n=30 Tax=Bacteria RepID=INTR_ECOLI Length = 411 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 155/372 (41%), Positives = 231/372 (62%), Gaps = 5/372 (1%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 G LR+ + + I +G F+Y ++FP S K R T EL + + +KETE+ ++ Sbjct: 44 GNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTM 103 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 ++ +K + II E S I +L R ELL G + N + GR+ TV+N Sbjct: 104 KKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDN 163 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 Y+ L ++ +F +G+++ PF+G+ L+ +R PDPLS+ EF L+++ + Q++NLW Sbjct: 164 YIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG-QSQNLW 222 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-KDRFTVPKTQAGTNRVIHLIKPAI 239 +VY+G+R GEL AL WED+DL+ G + +RRNL D F PKT AG R + L++PA+ Sbjct: 223 KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGI-RTVTLLQPAL 281 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 +AL+ Q LT ++ I + REYGRTEKQK FVF P +++V S+ Sbjct: 282 EALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPR--VCNGKQKPYYSVSSLGAR 339 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 W+AA+KRAG+R R Y +RHT+ACW LTAGANPAFIA+QMGH AQMV+++YG W+ + N Sbjct: 340 WNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMN 399 Query: 360 NAQVALLNTQLS 371 + Q+A+LN +LS Sbjct: 400 DEQIAMLNARLS 411 >UniRef50_C8VWK7 Integrase family protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWK7_DESAS Length = 389 Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats. Identities = 70/381 (18%), Positives = 131/381 (34%), Gaps = 30/381 (7%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 R V + F + ++ A LT KE ++K+L K+ ++A +L Y Sbjct: 31 RKVVEATSEREAKKLLDVFSAEVQKGQYI-APSKLTFKEFSQKWLESKK-DLAPKTLYRY 88 Query: 64 RAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 + ++ IL +G + I +++ L + S TV + Sbjct: 89 KEILNSRILPAMGHLKIED-IKPFHIMQFYGNLQEPGIREDGK----EGTLSPATVLYHH 143 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAK--NLW 180 L +F V + NP + K + E+ L+ A Q K + Sbjct: 144 RLLTNIFNAAVKWQIILTNPALRVEAPKAKKHKATSYEEEDTAALLSALEEQPLKFQAIV 203 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK----DRFTVPKTQAGTNRVIHLIK 236 +++ G+R GE+ L W+DIDL GT+ +R++ F + R+I + Sbjct: 204 YIALGCGLRRGEIMGLEWKDIDLTKGTLEVRQSSQYLPGHGTFAKSPKNESSERIIAVPT 263 Query: 237 PAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI 296 + L+ + + ++Q G DSI Sbjct: 264 ETMSLLKQHRVQQNEQRLQVGG----------------LWQASDRLFTTWDGKPMHPDSI 307 Query: 297 RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 + + +K L + RHT A + + AG IA+++GH+ +Y Sbjct: 308 TKWFSGFLKNNNLSPLPFHGLRHTAASYMIKAGIPLKNIASRLGHSSPNTTLNIYAHSFK 367 Query: 357 ENNNAQVALLNTQLSEFAPTM 377 + +N L+ Sbjct: 368 SVDAEAANKMNDILTTRKKGQ 388 >UniRef50_C2RY84 Prophage LambdaBa04, site-specific recombinase, phage integrase n=4 Tax=Bacillus cereus group RepID=C2RY84_BACCE Length = 378 Score = 297 bits (760), Expect = 7e-79, Method: Composition-based stats. Identities = 71/344 (20%), Positives = 131/344 (38%), Gaps = 39/344 (11%) Query: 35 RQDLTIKELAEKFLAL-KETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVR 92 ++LT+ E +++L + V T+ YR + I+ +IG L + Sbjct: 60 DKNLTLSEYLQEWLENTAKQRVRDTTFINYRRAVNSRIIPVIGSHKL-KDLKPLHGQRFV 118 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 K L+ S + L + V L NPF+ + + Sbjct: 119 KSLI-------------DEELSPKYIEYIFIVLKGALEDAVKWELLYKNPFEHVEIPRPR 165 Query: 153 RTIPDPLSREEFIRLIDACR--NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 + + + S EE + + N +L+ +++ TG+R GEL L W+++DL G + + Sbjct: 166 KVVNNTWSIEETKTFLTYAKFDNPIYYHLFLLALNTGMRRGELLGLKWKNVDLVEGKVSV 225 Query: 211 RRNLAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 L D RFT PKT +G+ R+I + + L+S K I + Sbjct: 226 TETLIYDELGFRFTEPKT-SGSKRLISIDQSLCKELKSYKAKQNEFKLAIGKAY------ 278 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL 326 + VF + G ++ +++ IK A + + + RHT+A L Sbjct: 279 ---EDNDLVFS-------REDGRPIYPRTLTTVFERFIKTAQVPKIRFHDLRHTHATLLL 328 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 G NP ++ ++GH + Y + + L+ L Sbjct: 329 KLGINPKIVSERLGHNSIKTTLDTYSHVTLDMQESATIALSEAL 372 >UniRef50_A7MYL9 Putative uncharacterized protein n=3 Tax=Vibrio harveyi group RepID=A7MYL9_VIBHB Length = 411 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 133/376 (35%), Positives = 207/376 (55%), Gaps = 11/376 (2%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEAR---QDLTIKELAEKFLALKETEVAKT 58 +LR+S+ I G FDY +FP+S+ + F ++LT++EL + ++ LK+T +A Sbjct: 44 QLRASILSEISLGTFDYLSRFPTSKKAQLFATPEQRGKNLTVRELFDDYIQLKKTTMASQ 103 Query: 59 SLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 SL + IGE+ S+I L+ +K ++ RSA T+ Sbjct: 104 SLYVLNNTARACCLFIGEERTISNITIMDALKCQKLMVDS-------PTRNGRPRSAKTI 156 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKN 178 NN + + F V + ++ DNPF + L PDPL EEF +LI++ N Q +N Sbjct: 157 NNMIKLMRRCFDLAVKSKFIDDNPFLHVELLSGGSGEPDPLELEEFHQLIESTTNLQQRN 216 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPA 238 ++ +++YTG+R GELCAL WED+DL+ GT+ + RN+ +R + R IHL++PA Sbjct: 217 IFTLAIYTGMRTGELCALAWEDVDLEKGTIEVTRNVTIERKFTTPKNKKSERTIHLLQPA 276 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 + AL+SQ LT L I V + ++ FVF PE + + + + + Sbjct: 277 LLALKSQRKLTMLGPVRDILVEVKGSNTFRQESVQFVFIPE-HRNGQETSETYKTTTYNR 335 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 +W A+KRAG+RHR SYQSRHTYACW +T GAN +FIA QMGH M+ +VYG++M + Sbjct: 336 LWSRALKRAGIRHRCSYQSRHTYACWLITKGANLSFIAEQMGHKSTMMLERVYGRFMKSH 395 Query: 359 NNAQVALLNTQLSEFA 374 ++ Q+ LN ++ Sbjct: 396 SHEQIEYLNGIMASNK 411 >UniRef50_B7IY65 DNA integration/recombination/invertion protein n=35 Tax=Bacillus RepID=B7IY65_BACC2 Length = 369 Score = 293 bits (750), Expect = 8e-78, Method: Composition-based stats. Identities = 63/338 (18%), Positives = 121/338 (35%), Gaps = 32/338 (9%) Query: 35 RQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRK 93 +T+K+ +L +K + K++ YRA I +++ IG L +N + + K Sbjct: 60 PSKVTLKDYLNHWLEIKSMSIQKSTFAGYRAFINQHVIPSIGMVALHK-LNVMHIQKCYK 118 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 + G + ++ L + V ++ NP K+ + Sbjct: 119 TAIN-------------KGITNNSILLMHRILKSALNLAVKQNIISRNPADFAEIPKKEK 165 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 T + EE + + + + + +++ TG+R GE+ L W+DID + T+ I + Sbjct: 166 TSIQTWTEEEVKKFLAHSQESRYHIGYLLAITTGMRLGEVLGLRWQDIDFEKHTVTINQT 225 Query: 214 LAK-DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKC 272 ++ + R I + I AL+ L K Sbjct: 226 SGHDNKIKKTAKTNSSKRTIPVPNETIVALKKHKILINKEKLRFGSA------------- 272 Query: 273 TFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANP 332 + + +G R+ + A + G++ K + RHT+A L G NP Sbjct: 273 ---YLDQDLINCNEFGRIIKRAHFRKSFIRATHKVGIKEIKFHDLRHTHATILLKQGVNP 329 Query: 333 AFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 I+ ++GH D M VY + V + Sbjct: 330 KIISERLGHTDISMTLSVYSHVLPNMQEEAVKNFGKSI 367 >UniRef50_C1CZ59 Putative Tyrosine recombinase xerC-like protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1CZ59_DEIDV Length = 379 Score = 293 bits (750), Expect = 8e-78, Method: Composition-based stats. Identities = 76/377 (20%), Positives = 142/377 (37%), Gaps = 38/377 (10%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 R + + + S RN + + LT+ +++L K+ +V + +Y Sbjct: 36 RRYFSAKTQAEAREKLQALVSERNGGCL--SSETLTLAAYLDRWLTHKQRDVKFNTHRSY 93 Query: 64 RAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 + +I +G+ L + + E+ LL G+SA + Sbjct: 94 EMTARVHIKPRLGKVQL-DKLTPLHIEELVSALLA-------------EGQSAKVALGCV 139 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCV 182 L V + N + ++P K + + +E R + R + L+ + Sbjct: 140 KLLRTALTQAVRWQLVGRNVAQSVTPPKHTPKEMQVWTPDEASRFLAVAREHRLYALFYL 199 Query: 183 SVYTGVRPGELCALGWEDIDLKNGTMMIRRNL----AKDRFTVPKTQAGTNRVIHLIKPA 238 ++ TG+R GEL L WE I++ GT++++ NL + PKT+A + R I L Sbjct: 200 ALATGMRRGELLGLKWESINMLAGTLVVQHNLIDRVSSVTLETPKTRA-SRRTIALSPDT 258 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 ++ALR+ L + + + Q+ VF +V G ++ Sbjct: 259 VEALRAHRHSQWLEQCKAGE---------KWQEHGMVFPSDV-------GTLMFPANLMG 302 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 + +A + + + RHT A + A P +A+++GH D +VY E Sbjct: 303 AFRRLCAKARVPAIRLHDLRHTSASLLIRANVPPKVVADRLGHTDPGFTLRVYAHVYEEQ 362 Query: 359 NNAQVALLNTQLSEFAP 375 A L L E Sbjct: 363 RRAAALPLGEMLREAGD 379 >UniRef50_A8MGP9 Integrase family protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGP9_ALKOO Length = 369 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 61/368 (16%), Positives = 129/368 (35%), Gaps = 37/368 (10%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLNTYRAVI 67 + + + N F + ++T+++ + +L + VA T+ + Y Sbjct: 33 FNTQKEAEKKLPEILQQLNTNTFVDTN-NITLRDYMQLWLEDYAKPNVAPTTYDKYTYAA 91 Query: 68 KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNA 127 + I+G L I + ++ +L + TV +Y LN Sbjct: 92 NKVSEILGNMKL-QQIKPIHIQQLVNKL-------------NNSDVTPSTVLSYYRVLNT 137 Query: 128 VFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTG 187 V ++ NP ++P + ++ L ++E L+D ++ + +++ G Sbjct: 138 AINQAVKWQFIQYNPCVAVTPPRNTKNKMMILDQDEIQILLDKSKDHVLYPVIVLALLCG 197 Query: 188 VRPGELCALGWEDIDLKNGTMMIRRNLA----KDRFTVPKTQAGTNRVIHLIKPAIDALR 243 +R GE+ L WE+ID +G + + NL + KT G R + + Sbjct: 198 LRRGEILGLQWENIDFFSGVIHLENNLVMANNESILKETKTSTG-RRAVDISS------- 249 Query: 244 SQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAA 303 + ++ + K + G F D I + + Sbjct: 250 ---------NVVEVLKKVKKQKMSYKLLYGSSYHDSNFVCTWEDGRPFRPDYIPKAFAKI 300 Query: 304 IKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQV 363 + A L + + RHT+A L +G +P + ++GH+ + Y + + Sbjct: 301 LVSANLPKIRFHDLRHTHASILLKSGIHPKVVQERLGHSSISITLDTYSHLVPSLQKSAA 360 Query: 364 ALLNTQLS 371 + T S Sbjct: 361 EKMATMFS 368 >UniRef50_C3L682 Prophage LambdaBa04, site-specific recombinase, phage integrase family n=10 Tax=Bacillus anthracis RepID=C3L682_BACAC Length = 374 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 72/372 (19%), Positives = 136/372 (36%), Gaps = 51/372 (13%) Query: 19 AKQFPSSRNLEKFGEA------------RQDLTIKELAEKFLAL-KETEVAKTSLNTYRA 65 A F + + E+ ++ T+ E +++L + V +T+ Y+ Sbjct: 32 ASGFKTKKEAERACNELIHQFNTGSLVDDKNFTLSEYLQEWLENTAKQRVRETTFTNYKR 91 Query: 66 VIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTN 124 I I+ ++G L + K L+ G S + Sbjct: 92 AINSRIIPVLGSHKL-KDLKPLHGQRFVKSLI-------------DEGLSPAYIEYIFIV 137 Query: 125 LNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLID--ACRNQQAKNLWCV 182 L + V L NPF+ + + + + S EE + ++ N +L+ + Sbjct: 138 LKGSLEDAVRWELLFKNPFQHVEIPRPRKVVNSTWSIEETKKFLNRTKFENVIYYHLFLL 197 Query: 183 SVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD----RFTVPKTQAGTNRVIHLIKPA 238 ++ TG+R GE+ L W++ DL G + + L D RFT PKT G+ R+I + + Sbjct: 198 ALNTGMRRGEILGLKWKNFDLNEGKISVTETLIYDENGFRFTEPKTH-GSKRLISIDQNL 256 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 +S K + + VF K G ++ Sbjct: 257 CKEFKSYKAKQNEFKLLFGQSY---------EDNDLVF-------AKETGQPILPRTMTT 300 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 ++ IK+A + + + RHT+A L G NP ++ ++GH+ + Y + Sbjct: 301 TFNQFIKKADVPQIRFHDLRHTHATILLKLGINPKIVSERLGHSSIKTTLDTYSHVTIDM 360 Query: 359 NNAQVALLNTQL 370 + V L+ L Sbjct: 361 QESAVLKLSEAL 372 >UniRef50_D2S8K7 Integrase family protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S8K7_9ACTO Length = 377 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 70/374 (18%), Positives = 133/374 (35%), Gaps = 39/374 (10%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALK--ETEVAKTSLN 61 R V + V ++ R +T+ E + ++ + +++ Sbjct: 34 RREVSGRTQAEVRAKLREL-RERVEAGAPVKDASITMAAWLEDWTTKALPASDRKQATID 92 Query: 62 TYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 Y + + +++ +G L + L + + G SA +V Sbjct: 93 LYATIARSHLVPKLGSLPL--------------DRLRPSNVEALVLAKRRAGLSASSVRT 138 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 L A V +G + NP + R LS ++ L++A R + + L+ Sbjct: 139 IYAVLRAALDVAVRDGLIQRNPAALVKRPAVERKDAGYLSAQQAEALLEAVRGDRLEALY 198 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD----RFTVPKTQAGTNRVIHLIK 236 V + TG+R GE AL W D+DL + +R L++ PKT+ + R + L Sbjct: 199 RVMLATGLRRGEALALHWRDVDLDAAVVRVRWTLSRTSAGLELGEPKTE-KSRRTVPLPV 257 Query: 237 PAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI 296 PA++ LR+ + + Q VF G ++ Sbjct: 258 PAVETLRAHRKRQAAEQLAAGSL---------WQASGLVFTS-------EIGTPLEPRNV 301 Query: 297 RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 + ++A +RAGLR + RH+ A + L AG + + +GH+ + +Y Sbjct: 302 LRRFEALAERAGLRGVHLHTLRHSAASFLLAAGTHTKVVQEHLGHSSYAITADIYSHVAP 361 Query: 357 ENNNAQVALLNTQL 370 L + Sbjct: 362 AQQREAADKLGQAI 375 >UniRef50_B8D1P6 Phage integrase family protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1P6_HALOH Length = 391 Score = 289 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 62/374 (16%), Positives = 135/374 (36%), Gaps = 32/374 (8%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 R K V + + ++ + + +++ +++ +A ++ Y Sbjct: 35 RKYFYGKTKKEVAKKMTELKM-KLFNGTYSEPSEMKLIDWLHRWIEGRKSTLAYSTYRNY 93 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIV--TQPGRSAVTVNNY 121 + +I N +LA I + KL +++ + K + G S TV Sbjct: 94 KVMINN--------HLADDIGETKLKDLKARQVQELLNDKLEKGKVYGEGGLSPRTVKYI 145 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKE-SRTIPDPLSREEFIRLIDACRNQQAKNLW 180 + L+ + V + N K + K+ ++++ + A R+ + L Sbjct: 146 YSTLHTALEQAVKENMIPRNICKAVEVPKKQEEKKLHTWNKKQVNIFLKAARDYKYFILH 205 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD----RFTVPKTQAGTNRVIHLIK 236 +++ TG+R GEL L W+DID++ + ++R LA+ F KT++G NR I + Sbjct: 206 YLALNTGMRRGELLGLQWKDIDMEKKRIEVKRQLARTDEGLIFKKVKTKSG-NRTIPITD 264 Query: 237 PAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI 296 + L+ + + + + ++ G+ ++ Sbjct: 265 NVVRELKRHQIKQGEKRLALGEAYNKKA---------------DLVASNGIGNPIDPRNL 309 Query: 297 RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 + + I+ GL + + RHT+A L A + +GH+ + Y Sbjct: 310 VRDFKDIIEETGLPEIRYHDLRHTFATLFLEAKGPIKTLQQILGHSSITVTIDTYSHVTE 369 Query: 357 ENNNAQVALLNTQL 370 E + T Sbjct: 370 EMLIEAERKMETMF 383 >UniRef50_C1IAU4 Phage integrase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IAU4_9CLOT Length = 390 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 60/384 (15%), Positives = 141/384 (36%), Gaps = 46/384 (11%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFL-ALKETEVAKTSLN 61 +R K V D + + + + +T++E +L K E+ +++ Sbjct: 37 IRKQFYGKTKREVLDKMNDYRDKSSRGLIAK-DEKITLEEWYNIWLFQFKANELKASTIE 95 Query: 62 TYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 Y +N + +I + KL ++ ++ Y + + G++ TV Sbjct: 96 RYNVFYRNYIK-------GCNIGQVKLKDLTAPIIQNYY-----NSLIKNGKTPYTVKML 143 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLK---ESRTIPDPLSREEFIRLIDACRNQQAKN 178 L + + Y+ N + P K + + EE + ++ ++ + + Sbjct: 144 HKALKSSLSYAKRINYIGINCCDNVIPPKVINKDDDKFKVFTLEEQKKFMNVIKDHKYRL 203 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRF------------TVPKTQA 226 ++ +++ TG+R GEL AL W+DI+ T+ + +++++ T PKT+ Sbjct: 204 MFILALGTGIRIGELVALKWDDINFDECTLKVNKSISRSYIEIEGKRKFLLEETTPKTR- 262 Query: 227 GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKN 286 + R + + + L + K++ + ++ Sbjct: 263 SSIREVGIPSNILKELINHRKEQDEYKDNYKE----------------IYTDNNYVFTDA 306 Query: 287 YGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 G + D++ + + +K + H + + RHTYA G + +GH+ ++ Sbjct: 307 LGRYILPDTLSKAYLKVLKDNNIPHTRFHSLRHTYATRLFEKGVPLKTVQKLLGHSSIKI 366 Query: 347 VFQVYGKWMSENNNAQVALLNTQL 370 +Y + + V LN Sbjct: 367 TADIYTHVIGNEKISAVEKLNDLF 390 >UniRef50_C6QSP6 Integrase family protein n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QSP6_9BACI Length = 399 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 72/390 (18%), Positives = 150/390 (38%), Gaps = 39/390 (10%) Query: 2 ELRSSVCYAIKTGVFDYAK----QFPSSRNLEKFGEARQDLTIKELAEKFLALKE-TEVA 56 + + DY +F ++ A + + + + +++ E++ Sbjct: 34 RIEDEALLKTTKKLRDYLNEELLKFKMEVEAGEYI-APEKMKLADFIKEWETKYAVKELS 92 Query: 57 KTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAV 116 +T+LN Y + IKN ++ ++ ++ +++ + + + + Sbjct: 93 ETTLNNYLSHIKN--------HILPALGHMRIDQIKPVHIVNFLDQIKRADGKKKPLATR 144 Query: 117 TVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR---TIPDPLSREEFIRLIDACRN 173 T+ N + + Q V+ + NP + K + +E L A +N Sbjct: 145 TIENAYLTIRNILQRAVEWQIIKSNPASAVKKPKSKKEAVKEVQVYDEKEVEALFRAVQN 204 Query: 174 Q--QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRF----TVPKTQAG 227 + + +++ G+R GEL AL W +IDL+ G + I + + K R PKT+ Sbjct: 205 EPFHWRIFTTLAIAAGLRRGELLALEWSNIDLEKGVIRINKAIVKGRKRSVEKSPKTKK- 263 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 +NR++ L K + L+ K D+ E + Sbjct: 264 SNRLVSLPKSVVAELKLYRRHWLKQKLQAGDLWKEE---------------KEYLFCNID 308 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 G HF + W KRAG+R+ + + RHT A + G + IA ++GH+D ++ Sbjct: 309 GRHFYPTTPTTWWRRFTKRAGIRYIRLHDLRHTSATLLINQGVHAKIIAERLGHSDIRVT 368 Query: 348 FQVYGKWMSENNNAQVALLNTQLSEFAPTM 377 +YG + + ++ L+ + + M Sbjct: 369 MDIYGHALQKADHEAANKLDHLFTNTSSQM 398 >UniRef50_B0KAT2 Phage integrase family protein n=7 Tax=Clostridia RepID=B0KAT2_THEP3 Length = 373 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 70/369 (18%), Positives = 144/369 (39%), Gaps = 35/369 (9%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLNTYRAVI 67 + K + + +F E +T+++ ++L + E + A +L + +++I Sbjct: 34 FKTKKEAEKALAEIIAKIEKNEFIE-PSKITLQQFINEWLKIYGEPKWAPKTLVSNKSLI 92 Query: 68 KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNA 127 N + ++ +L +++ + + + + S T+N LN Sbjct: 93 DNY--------IIPNLGHIELQKLKPVEIQKFY-----NSLKEKQLSNTTINYVHRLLNQ 139 Query: 128 VFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTG 187 V +F V Y+A NP + + K+ + + E + ++ +++YTG Sbjct: 140 VLKFAVKWQYIAKNPCELVEAPKKDKKEFVTWNFEHVKKAKKIFKDTPIYIHVMIALYTG 199 Query: 188 VRPGELCALGWEDIDLKNGTMMIRRNLAKD----RFTVPKTQAGTNRVIHLIKPAIDALR 243 +R GE+C L WEDID KN T+ +RR + F PKT+ +I + + L+ Sbjct: 200 LRLGEICGLRWEDIDFKNQTITVRRTAQRIDGRFIFKEPKTETSKG-IISIPDFLVQILK 258 Query: 244 SQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAA 303 + +K + + EY E V G D + + + Sbjct: 259 QEKNKQLQNKLIFGEKYITEY--------------EGFISVWEDGRFKEPDYVTKKFRKI 304 Query: 304 IKR-AGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQ 362 +K+ + + + + RHT+A L +G + I+ ++ H Y E + Sbjct: 305 LKKQSDIPVIRFHDLRHTHATLMLRSGVDLKIISKRLRHGRISTTADFYSHVDLEMDREA 364 Query: 363 VALLNTQLS 371 + L + LS Sbjct: 365 LRKLESNLS 373 >UniRef50_Q3ABG2 Prophage LambdaCh01, site-specific recombinase, phage integrase family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABG2_CARHZ Length = 371 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 67/379 (17%), Positives = 141/379 (37%), Gaps = 50/379 (13%) Query: 10 AIKTGVFDYAKQFPSSRNLEKFGEA------------RQDLTIKELAEKFLALK-ETEVA 56 + + F + + EK + +T+KE +L ++ Sbjct: 22 ENGKKKYKWIGGFKTKKEAEKVLAEMINKVETNNFIFPEKITLKEFLNYWLENYVRPNLS 81 Query: 57 KTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSA 115 T+ Y A+I +I+ +L +VR + Y K + S Sbjct: 82 PTTAYGYEAIINLHIIPFF---------KNIELQKVRPIDIQQYYNSKRDE------LSG 126 Query: 116 VTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQ 175 T+ + L+ F F + + +NP + K + L +E L++A ++ Sbjct: 127 KTLLQHHRILHKAFDFAMKLQLIPNNPIDFVDSPKAKKYKAKILDLKEIKTLLNALKDTD 186 Query: 176 AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRV 231 + +++ G+R GEL AL WED++ + GT+ IRRNL + PK++ + R Sbjct: 187 LEVPINLALSLGLRRGELLALKWEDVNWEEGTIQIRRNLVRAGTKLILKEPKSET-SIRT 245 Query: 232 IHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHF 291 + L K + L++ K + + ++ KN G+ Sbjct: 246 LKLSKTLLTMLKNHRKKQIELKLMLGNE----------------YKDTGFICCKNNGEMI 289 Query: 292 TVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 + + +K+ GL + + RHT A L + ++++GH+ + +Y Sbjct: 290 NPSTFSHQFSDFLKKHGLPDIRLHDLRHTNATLMLKSNIPAKIASSRLGHSTVAITLDLY 349 Query: 352 GKWMSENNNAQVALLNTQL 370 +++ + ++ + Sbjct: 350 SHVLTDMDEEVANKIDDII 368 >UniRef50_B9MP49 Integrase family protein n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MP49_ANATD Length = 373 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 63/343 (18%), Positives = 130/343 (37%), Gaps = 35/343 (10%) Query: 36 QDLTIKELAEKFLAL-KETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRK 93 + T EL + +L + V+ ++ +Y + I +I +G+ L + + L + Sbjct: 59 EQKTFGELLDLWLNTVAKNRVSLSTFQSYSSSIALHIKPFLGDVEL-NKLTAMDLQKYY- 116 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 +I + G S+ + ++ + V + NP + P ++ Sbjct: 117 -----------QHITGEKGLSSTLALYHHRIIHQALDYAVRMNMIEKNPADYVDPPRKRS 165 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 P + R +D RN +++YTG+R GE+ AL W+DI+L+ G +++ + Sbjct: 166 YQPSIWDEDTIKRALDIFRNTNIWVPVLLAIYTGMRIGEITALKWDDINLEQGYIVVSKT 225 Query: 214 LAKDRFTVPKTQAG----TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 L K + + G + R++ + I+ L+ KE + + Sbjct: 226 LMKINRQLYIKEKGENKSSYRIVAISSNVIEELKQWRRKQEQYKEKLKE----------- 274 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG 329 ++ E G I +++ I++ GL + + RHT+A L G Sbjct: 275 -----LYHNEGFVCTFEDGRVQDPKYITKVFQKTIEKHGLPKIRFHDLRHTHASLLLKHG 329 Query: 330 ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 +P I++++GH+ +Y E L Sbjct: 330 VDPKHISDRLGHSTITTTLNIYSHVFDEKRRKVAETFEDILKN 372 >UniRef50_Q0AUP6 Phage integrase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AUP6_SYNWW Length = 392 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 63/376 (16%), Positives = 134/376 (35%), Gaps = 35/376 (9%) Query: 5 SSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKET--EVAKTSLNT 62 K Y ++ + + ++TIK+ +K++ T + ++ + Sbjct: 32 KKRFTGTKREANKYLQRILGEIESGSYSDLG-NITIKQYLDKWINAYCTPTNLQPKTIRS 90 Query: 63 YRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 Y + I +I+ +G L +++ + + + G S TV + Sbjct: 91 YTSTINNHIIPHLGRHKL-NNLKAAHIADYYALMSKS-------RTEGGAGLSPTTVLYH 142 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWC 181 L+ + V+ YL NP + P +++R LS E+ LI +Q Sbjct: 143 HRILHQALKHAVNQDYLKQNPVAKVQPPRKNRPDIKVLSVEQARYLIARYSEEQIYLPVF 202 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD----RFTVPKTQAGTNRVIHLIKP 237 +++ TG+R E+ AL W+++D N T+ + L + PKT+ + R I + + Sbjct: 203 LALMTGMREAEIAALRWQNVDFDNRTLSVTNALQRQENRLELKEPKTK-KSRRSIPVPEQ 261 Query: 238 AIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIR 297 + L+ + +E + + + G + + I Sbjct: 262 VVVVLKKEKERQDCYREILGEG----------------YDCRGFVCAWEDGKPYDPEWIG 305 Query: 298 QMWDAAIK-RAGLRH-RKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 + W + + + + + RHT+A L+ N I +++GH +Y Sbjct: 306 KQWAKLVASDDKIPNGVRFHDLRHTHATILLSQNINLKVIQDRLGHESIATTGDIYSHVT 365 Query: 356 SENNNAQVALLNTQLS 371 +L S Sbjct: 366 PGIQQVAADVLENLFS 381 >UniRef50_UPI0001BC493F putative integrase n=1 Tax=Neisseria mucosa ATCC 25996 RepID=UPI0001BC493F Length = 415 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 108/388 (27%), Positives = 184/388 (47%), Gaps = 53/388 (13%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLN 61 +LR VC I GVFDYA+ FP S+ E+ + T +E+AE +LA +++ ++L+ Sbjct: 46 KLREEVCTRIAIGVFDYAEFFPDSKRAEETERSP---TFREMAEAWLAT-VNQLSHSTLS 101 Query: 62 TYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 YR ++ ++L IG+ ++ I L + L SA T NN Sbjct: 102 RYRGMLNSHVLPKIGDMSI-DRIQYSTLAGLLATL----------------DCSAKTRNN 144 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQ-AKNL 179 T + F + +G + DNP + ++ K + PDP + EE ++ +N+ N Sbjct: 145 IATVIRQPFVLALRDGRIKDNPAQHLANAKVQKEPPDPFTLEEAEAILGYLKNEPVFHNY 204 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAI 239 + ++ ++G+R EL AL W+DID + + + + + KT + R I L A+ Sbjct: 205 FELAFFSGMRTSELIALTWQDIDFQRQCVCVNKASVAGKLKSTKT--HSYRDIELNSRAL 262 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI-RQ 298 +ALR Q T L+ +VF + G F D + + Sbjct: 263 EALRRQWQRTGLA-------------------SGYVFINPKT------GSPFENDKVPWR 297 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS-E 357 W AIK AG+R+RK Y +RHT+A +L AGANP ++A QMGH+ +M+ + Y +W+ Sbjct: 298 PWQHAIKIAGVRYRKPYNTRHTFATLNLMAGANPMWVARQMGHSTMKMLLENYSRWIDLA 357 Query: 358 NNNAQVALLNTQL-SEFAPTMPHNEAMK 384 + + + + + A ++P N M+ Sbjct: 358 DKQREKSKIEQLFDGKCANSVPKNTEME 385 >UniRef50_D2BJR0 Site-specific recombinase, phage integrase family n=2 Tax=Dehalococcoides RepID=D2BJR0_DEHSV Length = 385 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 71/383 (18%), Positives = 141/383 (36%), Gaps = 43/383 (11%) Query: 5 SSVCY-AIKTGVFDYAKQFPSS---RNLEKFGEARQDLTIKELAEKFLALKET-EVAKTS 59 + G +A++ ++ R T+ E +L + A + Sbjct: 27 KKIYQWQTVKGTKSHAEKELAALINRKNNGSFVKPTKTTVGTFLESWLETYASCNTAPRT 86 Query: 60 LNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIP-KSNYIVTQPGRSAVTV 118 Y +++ +L ++ + +L ++R E + Y S V+ G SA TV Sbjct: 87 FERYSQIVR--------LHLTPNLGRIELTQLRPEHIQAYYSKALSGGRVSGGGLSAQTV 138 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC------R 172 ++ L+ V G LA N + P + + ++ E+ L + Sbjct: 139 KHHHRVLSEALNHAVKWGLLARNVAMAVDPPRPEKREMHTIAPEDMSVLFEEAAKMEKNS 198 Query: 173 NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-----KDRFTVPKTQAG 227 + ++ +++TG+R GE+ AL W DIDL + +R +L + PKT G Sbjct: 199 GLPYELIFMTALHTGMRRGEILALRWSDIDLAKSKIYVRCSLQCLKNGEIIIREPKT-PG 257 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 + R++ + ++ L + + Q + VF Sbjct: 258 SRRLVSMTPSLLEKLIIHKESSSAN---------MILQGKTLQGDSLVF-------AHFD 301 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 G +++ + KRAGL + + + RH++A LTAG +P ++ ++GH+ Sbjct: 302 GTPINPNTVSPAFAKIAKRAGL-NLRLHDLRHSHATLMLTAGVHPKIVSERLGHSTVAFT 360 Query: 348 FQVYGKWMSENNNAQVALLNTQL 370 Y + +A L Sbjct: 361 LDTYSHVIPGLQDAAAKTFEKSL 383 >UniRef50_A4AD26 Prophage integrase n=5 Tax=Gammaproteobacteria RepID=A4AD26_9GAMM Length = 399 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 90/392 (22%), Positives = 161/392 (41%), Gaps = 47/392 (11%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDL--------TIKELAEKFLALKETE 54 + V I G FDYA FP S N +F + + + T K A++++ Sbjct: 41 ILQRVESEIVLGTFDYAAYFPESPNAARFADHDKQIEQRSAKTPTFKAFADQWMEENRIG 100 Query: 55 VAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGR 113 + +NT + K+++ G + S+I+KE +L R +L + G Sbjct: 101 WKPSYINTLEHSLSKHVIPAFGSVPM-SAISKEDILAFRNQLA------RIPRKDGSVGL 153 Query: 114 SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRN 173 SA +N M L + + + DNP++GI LK RT +P + +E ++D R Sbjct: 154 SAARINTVMVPLRQIMREA-SERFGFDNPYQGIKLLKVPRTKVEPFTLDEVKAVLDGVRE 212 Query: 174 QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIH 233 V +TG+R GE+ L W+ ID K +++R + T KT+ + R I Sbjct: 213 D-FHAYMTVRFFTGMRTGEIHGLKWKYIDFKQRMILVRESYVAGAMTDTKTEE-SARDIP 270 Query: 234 LIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV 293 + AL++Q T K VF G+ ++ Sbjct: 271 MSDEVYAALKAQHKRTG--------------------KLDLVF-------CTGSGEPLSI 303 Query: 294 DSI-RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYG 352 +++ +++W + + R YQ+RHT A L AG NP ++A +GH+D+ + + Y Sbjct: 304 NNVCKRVWYPLLALLKIPKRPPYQTRHTAATLWLAAGENPLWVAQILGHSDSAITHKRYA 363 Query: 353 KWMSENNNAQVALLNTQLSEFAPTMPHNEAMK 384 +W+ + + T + + + Sbjct: 364 RWIPNLTRQDGSAFAALWAAHTHTQSDDSSDE 395 >UniRef50_A4ILC8 DNA integration/recombination/invertion protein n=1 Tax=Geobacillus thermodenitrificans NG80-2 RepID=A4ILC8_GEOTN Length = 387 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 77/376 (20%), Positives = 146/376 (38%), Gaps = 30/376 (7%) Query: 5 SSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLNTY 63 +V K +F + ++ + +++ + + + E +++ + TY Sbjct: 32 KTVHVKTKKEAEKELAKFIAEIEAGEYIK-PAKMSLSDFIQLWRDNYAEKQLSPKTFETY 90 Query: 64 RAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 I I+ +G LA I L+ L + ++ + S T+N Y Sbjct: 91 NNYINTRIIPQLGHLQLAD-IKPIHLIRFLNNL----KKDETRLDGKKGSLSEATINYYR 145 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQ--QAKNLW 180 L +F V+ +L NP + + KE D E L+ + + + + Sbjct: 146 RILKNIFNRAVEWKFLQVNPAEKLPKEKEDIGKGDVYDENETRLLLKCLEKEDLKWRLYF 205 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR-----FTVPKTQAGTNRVIHLI 235 +++ G+R GEL AL WEDIDL++GT+ ++ +L+ + PK++ + R I + Sbjct: 206 TLALTCGLRKGELLALQWEDIDLESGTLYVKHSLSYTKEKGFFLKEPKSKK-SKREIAIP 264 Query: 236 KPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDS 295 + L+ + KE + D E FVF G Sbjct: 265 SFVLPLLKKYKNVRLREKEKLQDE-------WEGGNYNFVF-------ATWNGKPHHHSY 310 Query: 296 IRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 R W+ +KR LR+ + + RHT A L G N ++ ++GH+ ++ F Y Sbjct: 311 PRTKWERFLKRNNLRYIRPHDLRHTSATIMLNNGVNYKTVSERLGHSSTRITFDFYVHRT 370 Query: 356 SENNNAQVALLNTQLS 371 E + + + Q Sbjct: 371 KEADRSAAECFDNQFG 386 >UniRef50_C1IBC3 Phage integrase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBC3_9CLOT Length = 400 Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats. Identities = 62/383 (16%), Positives = 147/383 (38%), Gaps = 44/383 (11%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKE-TEVAKTSLN 61 +R K V F +N + T+++ + +L + E ++++ Sbjct: 47 IRKQFYGKTKLEVLKKVDDFK-VKNTLGLSTIDEKTTVQQWIKMWLEEYKMNECRPSTID 105 Query: 62 TYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 Y + +N + +++ KL +++ L Y N ++ + ++ T+ Sbjct: 106 RYFGIYRNYIE-------NTNLGVVKLKDLKPLTLQNYY----NELIKKKNKTTDTIKII 154 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLK-ESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 L+ + + +NP ++ K + + + EE ++A + + + ++ Sbjct: 155 NKVLSGGMRQAQKEQLILNNPCLFVTLPKSKVKEEVMTFTMEEQRIFLNAIEDSRDRCIF 214 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR-------------FTVPKTQAG 227 +++ +G+R GEL AL W DID + + + +++ + + +PKT+ Sbjct: 215 NLALGSGLRLGELLALKWSDIDFSSNEVKVSKSVKRVKCFDENTNTKTKIIEQLPKTRY- 273 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 + R I L K I+ L+ + K D ++ Sbjct: 274 SERKIPLPKATINELKRHKNIILQEKLMAGD----------------IYIDNNLVFPNVL 317 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 G + ++ + + + + +A + +RK + RHTYA G + I +GH+ + Sbjct: 318 GGYIDARNLTKRYKSILNKANIPYRKFHALRHTYATRLFENGVSLKVIQVLLGHSSMDIT 377 Query: 348 FQVYGKWMSENNNAQVALLNTQL 370 +Y + + V +L+ L Sbjct: 378 ANIYTHVLPKEKIRAVDVLDKCL 400 >UniRef50_D2S5L4 Integrase family protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5L4_9ACTO Length = 404 Score = 283 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 72/362 (19%), Positives = 128/362 (35%), Gaps = 35/362 (9%) Query: 25 SRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSIN 84 + + T+ ++L +K E T++ +YRA ++ + + +I Sbjct: 30 ANRTAQGVRVDDRETVASFLARWLQVKAGEAKPTTVRSYRAHVERV--------IVPAIG 81 Query: 85 KEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFK 144 + E+R E + + +N GR VTV L + +GV L N Sbjct: 82 HVPIEELRAEHVEQLLVDAAN------GRGPVTVRRIHATLRSALSYGVKTRRLPFNVAS 135 Query: 145 GISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLK 204 ++P R P S E + + L+ V G+R GE L W D+DL Sbjct: 136 NVTPPNGIRPEVQPWSAAELAAFLRHVETDRLGPLFEVIAACGLRRGEALGLRWSDLDLA 195 Query: 205 NGTMMIRRNLA----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVH 260 N T IR+ + + +F+ PKT+ + + L + A+ AL L ++ + Sbjct: 196 NRTARIRQTIVDVGGRLQFSTPKTR-SSEATVPLTERAVQALLQVRLGQDLDRQGWGGAY 254 Query: 261 FREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHT 320 VF + G + + + A K AGLR + + RH Sbjct: 255 HA---------HDLVF-------ARENGAPLRPEYATRRFVALTKAAGLRWVRLHDLRHG 298 Query: 321 YACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHN 380 A L AG A ++ + H+ + YG + + L + + Sbjct: 299 AASLMLAAGVPMAIVSKVLRHSSIGITVDTYGHLSEDTVRTASDAMAAALEQACKSTAAA 358 Query: 381 EA 382 Sbjct: 359 AG 360 >UniRef50_D1A578 Integrase family protein n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A578_THECD Length = 409 Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats. Identities = 69/364 (18%), Positives = 133/364 (36%), Gaps = 40/364 (10%) Query: 24 SSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASS 82 +R E +T+ + +++L E+ +L Y +++ I IG+ L + Sbjct: 67 KARRGEYIDRT--TITVAQYLDEWLEAHAVEIKPRTLAGYHTMVRLYIKPHIGDLRL-QA 123 Query: 83 INKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVD-NGYLADN 141 + ++ ++ ++LL ++ S TV L+ F V + + N Sbjct: 124 VRPAQITKLYRDLL-------ASGGEGGKPLSVSTVMRVHAILHKAFADAVLVDELIPSN 176 Query: 142 PFKGISPLKESRTIPD-PLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWED 200 P + K D + + + A R + + ++ YTG R GEL AL W + Sbjct: 177 PAERAKRPKGLVREADGIWTPAQLRVFLQAVREHRLFAFYHLAAYTGARRGELLALRWSN 236 Query: 201 IDLKNGTMMIRRN--LAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIID 258 +DL + I + + K R T++G +RV+ + + LR + + Sbjct: 237 VDLDGKRITIGGSAGVVKGRRIEGTTKSGRSRVVTIDDETVAVLREHRKAQLAEQFQAGE 296 Query: 259 VHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAG---------- 308 + +VF G+ DS+ + I+ Sbjct: 297 A-------WRGAEDGYVFT-------TERGEPIHPDSVGWLMTKTIRAYNNPPQGPKPAE 342 Query: 309 -LRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLN 367 L H + + RH +A L AG +A ++GHAD + +VY + A + Sbjct: 343 PLPHARVHDLRHIHATTLLLAGVPVHVVAARLGHADPAITLRVYAHVIRSAEVAAADVFA 402 Query: 368 TQLS 371 +S Sbjct: 403 KVMS 406 >UniRef50_C9R814 Integrase family protein n=2 Tax=Ammonifex degensii KC4 RepID=C9R814_AMMDK Length = 391 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 64/379 (16%), Positives = 123/379 (32%), Gaps = 37/379 (9%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 RS + + + + G A + LT+ L ++ +L Sbjct: 30 RSQTVRGTRQDAERALAELLVKAHRGELGRAPRGLTVAGLLNAWVEAHRRSWRPNTLANK 89 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 R + +IG + + + L + T + Sbjct: 90 RTAARAWGRLIGHLEVER-LTPADVELALARLAEE--------------YAPSTAKEVFS 134 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQ----AKNL 179 + ++ L +P +G+ + P + EE R ++ + K Sbjct: 135 SFRQALRWARKRKLLHHDPTEGVPAPRGETQEITPWTGEEAARFLEYLEKARMRKAYKAF 194 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR--FTVPKTQAGTNRVIHLIKP 237 + +++ TG+R GEL AL W+D+DLK G + +RR ++ F PKT+ R I + Sbjct: 195 FRLALATGMRLGELQALRWQDVDLKRGEVCVRRTYSEAGKCFHEPKTKKARRR-IPIDPV 253 Query: 238 AIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIR 297 LR + + + VF G D + Sbjct: 254 TTAWLREWRKEQLEERLRAGEGWA--------DREGLVFTTRK-------GTVVDRDDLL 298 Query: 298 QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 + A + AG+ + + RHT+A L +P + ++GHA + +Y + Sbjct: 299 RALRRACREAGVPGIRFHDLRHTHASLLLRQNVHPKVVQERLGHASVKTTLDLYSHLLPG 358 Query: 358 NNNAQVALLNTQLSEFAPT 376 V + L + Sbjct: 359 AQEPAVRAVAELLDRRIDS 377 >UniRef50_C9RA80 Integrase family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RA80_AMMDK Length = 383 Score = 280 bits (718), Expect = 5e-74, Method: Composition-based stats. Identities = 66/343 (19%), Positives = 131/343 (38%), Gaps = 31/343 (9%) Query: 35 RQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNI-LSIIGEKNLASSINKEKLLEVRK 93 + +T+ E +++ A ++ +++ + Y +I++ + +G L ++ L + Sbjct: 64 PEKVTLAEYLKEWHAARKHKLSLRTWERYGQLIEHWLIPHLGGIPL-RKLSPVHLEKFIS 122 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 +L ++ + + S TV + LN + V + NP + + +++R Sbjct: 123 AMLE------ADRLDGKGKISPTTVRHAALVLNKALRDAVKKRLIPYNPMEAVDKPRKAR 176 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 P L E RL+ A ++VYTG R GE+ L W D+D + G + I + Sbjct: 177 KEPPALKEGELRRLMSAAEGTYLYAPITLAVYTGARLGEILGLRWRDVDFEAGCIFILQA 236 Query: 214 LAKD-----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTE 268 L ++ F PKT + R I + + ALR Q L K Sbjct: 237 LKRNLKGELYFDEPKT-PRSRRRIEIGPACLAALRKQKKLQAEWKLKAGSA--------- 286 Query: 269 KQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTA 328 +Q + G + + + G+ + RHT+A L A Sbjct: 287 -------WQETGLVCTREDGSPIDPHAFSSAFRKLASKLGI-DANFHALRHTHATMLLKA 338 Query: 329 GANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 G + ++ ++GHA + +Y + L+ +L+ Sbjct: 339 GVHLKIVSERLGHASVAITGDLYSHVLPGMQGGAAQLVEEELN 381 >UniRef50_UPI0001694281 DNA integration/recombination/invertion protein n=8 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694281 Length = 413 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 71/379 (18%), Positives = 141/379 (37%), Gaps = 35/379 (9%) Query: 17 DYAKQFPSSRNLEKFGEARQDLTIKELAE-KFLALKETE---VAKTSLNTYRAVI-KNIL 71 D +F ++ A Q +T+++ E ++ + ++ + TY I I+ Sbjct: 55 DELHKFKIEVEAGEYI-APQKMTLRQFIENEWEPKYASNTENLSPLTYQTYMHFIENRIM 113 Query: 72 SIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQF 131 + G KNL I ++ +L P++ S T+ L +F Sbjct: 114 PVFGHKNLED-IRTLHIVTFINDLSK----PEARKDGKSGKLSPGTIQYIHRVLKNIFNR 168 Query: 132 GVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQ--QAKNLWCVSVYTGVR 189 + + NP G+ K +T D +E I A + + + L S+ G R Sbjct: 169 ATEWQLIKTNPIVGVKKPKVEQTEFDFYDEDEAREAIAALSKEPRRWRLLILGSMVGGFR 228 Query: 190 PGELCALGWEDIDLKNGTMMIRRNLA-----KDRFTVPKTQAGTNRVIHLIKPAIDALRS 244 GEL AL W ++D N T+ I ++++ + PK++ + R++ + +D L+ Sbjct: 229 RGELLALEWSNVDFDNMTLSINKSISLTKDGRAVEKAPKSK-SSKRIVDMPDWYMDELKV 287 Query: 245 QMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAI 304 + K + D + +VF +G F + W+ Sbjct: 288 HEYEWKKEKLSVGD-------KWRGGDRQYVFHA-------GFGKPFHHTYPTEWWNGFT 333 Query: 305 KRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVA 364 KR L+ + + RH+ A + AGA+ + ++GH+ Q +Y + + Sbjct: 334 KRHNLKRVRFHDLRHSSATLLIEAGASMKAVQQRLGHSKHQTTADIYAHVTKKVSRDTAE 393 Query: 365 LLNTQLSEF--APTMPHNE 381 N ++P + Sbjct: 394 KFNKFAPNNIRPQSVPKTQ 412 >UniRef50_A9VJZ8 Integrase family protein n=15 Tax=Bacillus cereus group RepID=A9VJZ8_BACWK Length = 370 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 60/370 (16%), Positives = 121/370 (32%), Gaps = 47/370 (12%) Query: 17 DYAKQFPSSRNLEKFGEA------------RQDLTIKELAEKFLALKETEVAKTSLNTYR 64 + F + + E L E E + K+ V + + Sbjct: 32 KKKRGFITKKEAENALTKLLSEVHTGTYVEPSKLLYGEYLESWFNTKKYSVGIQTAKVLK 91 Query: 65 AVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 + I+ +G LA + + L G T+ + Sbjct: 92 GYLNSRIIPSLGNIKLAK-LTSLHMQNYVNSL-------------RDEGLKRGTIEKIIK 137 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVS 183 + + +D + N K + + E + A ++ + ++ ++ Sbjct: 138 LIRNSLEHAIDLELITKNVAAKTKLPKADKEELTVWNEHEVQFFLKAAQDSRYSIVFHMA 197 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFT---VPKTQAGTNRVIHLIKPAID 240 + TG+R GEL W+D+DL+ G + I + L+ D T KT+ + R I L + Sbjct: 198 LVTGMREGELLGFRWKDVDLEKGHLTISQTLSHDGKTFLLGGKTK-SSLRKILLPASTVA 256 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 L+ + K + +Q G ++R+ Sbjct: 257 KLKKHRAVVLKEKLSQGEE----------------YQDNDLVMCTPSGTPINPANVRRSL 300 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 +A IK+ + + + RHT+A L G N I+ ++GH++ ++ Y + Sbjct: 301 NALIKKVAVPKIRFHDLRHTHATLLLAKGVNVKVISERLGHSNIKITLDTYSHVLPTMQE 360 Query: 361 AQVALLNTQL 370 V + L Sbjct: 361 DAVNKIEEIL 370 >UniRef50_B9KXE0 Transposase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KXE0_THERP Length = 316 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 74/327 (22%), Positives = 126/327 (38%), Gaps = 33/327 (10%) Query: 51 KETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQ 110 + T + + Y ++++ + ++ + L +V ++L + + Sbjct: 5 RRTSLRPRTWAGYESIVR--------VRIIPALGRLPLDKVEPQVLQAFASQ-----LLT 51 Query: 111 PGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDA 170 G S +V N L+ F V G L NP + + SR L+ E RL+ Sbjct: 52 QGLSVQSVQNTHPLLHRPFADAVKWGLLGRNPCDLVDLSRASRLQLRALTAPEVARLLAT 111 Query: 171 CRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQA 226 C + L V+V +G+R EL AL W DID + + R+L + R VP A Sbjct: 112 CADDPLGPLVTVAVLSGLRLRELLALQWGDIDWERSEPSVVRSLQRVRGQGLVVVPPKTA 171 Query: 227 GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKN 286 + R + L A++ALR Q V +R + +VF Sbjct: 172 ASRRRVPLSPLALEALRRQRRHQ---------VEWRLAAGPTWAEGDWVFTSV------- 215 Query: 287 YGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 G + + ++RAGL HR+ + RHT A L G +P +A+ +GH+ Q+ Sbjct: 216 RGVPLDPAETTRRFHRLLERAGLPHRRFHDLRHTTASLLLADGVHPKVVASILGHSTVQV 275 Query: 347 VFQVYGKWMSENNNAQVALLNTQLSEF 373 VY + L ++ Sbjct: 276 TLDVYSRVTPGLARQAAERLQQLVANS 302 >UniRef50_Q3Z6H5 Site-specific recombinase, phage integrase family n=1 Tax=Dehalococcoides ethenogenes 195 RepID=Q3Z6H5_DEHE1 Length = 386 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 63/347 (18%), Positives = 120/347 (34%), Gaps = 41/347 (11%) Query: 34 ARQDLTIKELAEKFLALK-ETEVAKTSLNTYRAV-IKNILSIIGEKNLASSINKEKLLEV 91 T+ E + +L + ++ ++ Y + K+I+ +G + + + L + Sbjct: 59 KPGKSTMYEYMQSWLNDYCKPNLSPRTVELYSYISTKHIIPTLGNIPIV-ELKPQHLQHL 117 Query: 92 RKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE 151 + G S TV L+ + V G L+ N + + K Sbjct: 118 YAD-------------KQSFGLSNRTVQIIHVVLHKALKNAVKTGLLSRNIAEAVDAPKI 164 Query: 152 SRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 R ++ + L++ + L+ S++TG+R E AL W DIDL + + Sbjct: 165 QRHEMQVMNESDMQVLLEKAKETPYYALFYTSLFTGMRRAECLALRWSDIDLILCQVYVL 224 Query: 212 RNLA---------KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFR 262 R++ + F PKT + + R I L + LR ++ + Sbjct: 225 RSMQYVQDADLGKRITFKEPKT-SKSRRQIALSPSNVIILREHYQDQSELRKTL------ 277 Query: 263 EYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYA 322 VF G +S+ W +R GL + + +RHT+A Sbjct: 278 --NLPGLTDSDLVFSHY-------DGSPLLPNSVTHAWIKLARRCGLNGIRLHDARHTHA 328 Query: 323 CWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQ 369 L G +P + ++GH Q+ Y A + + Sbjct: 329 SLLLKQGVHPKIVQERLGHGSIQITLDTYSHVAPGLQQAAASKFDDI 375 >UniRef50_A4J0G7 Phage integrase family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J0G7_DESRM Length = 388 Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats. Identities = 66/371 (17%), Positives = 132/371 (35%), Gaps = 32/371 (8%) Query: 17 DYAKQFPSSRNLEKFGEA------------RQDLTIKELAEKFLALKETEVAKTSLNTYR 64 Y F R+ + F + + E +L K+ ++ TS Y Sbjct: 30 KYKGGFKKERDAKLFAAQLTVNISQGTHIEPNKMFLFEYLNNWLEEKKETISPTSYCGYE 89 Query: 65 AVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 I+ +I IG L S + + + +L +I + S ++ Sbjct: 90 VNIRCHINPYIGGIKL-SDLRAAHIRGLYSKLQKAREIKIDGEKRSFKPLSGTSIRYVHR 148 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVS 183 L+ + + NP K ++P +++ LS ++ ++D R +S Sbjct: 149 VLSKALEDAYREETIPKNPAKLVTPPTKNKFEAGFLSTKQIREMLDKLREDALYMPVYLS 208 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTV---PKTQA-GTNRVIHLIKPAI 239 V G R GE+ L W D+D++N + IR NL D KT+ +NRVI + I Sbjct: 209 VVLGARRGEVLGLQWSDVDMENKLIHIRHNLIMDNGNPVLREKTKTDSSNRVIVVTDRLI 268 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 AL+ + + K + ++ G F + + Sbjct: 269 KALKEHK--------------LKLKQKEMKLQHGQLYHKSDFVCTWPDGKPFNPSHLSRS 314 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 + +++ GL + + + RH+ A + ++++GH+ Q+ +YG Sbjct: 315 FSLRLQKYGLPNIRFHDLRHSNAALMIAQNVPMKGASDRLGHSTIQITNDLYGHTERSVQ 374 Query: 360 NAQVALLNTQL 370 ++ + Sbjct: 375 EEIAIKIDQAI 385 >UniRef50_C2E2T4 Bacteriophage integrase n=5 Tax=Lactobacillus RepID=C2E2T4_LACJO Length = 386 Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats. Identities = 71/341 (20%), Positives = 121/341 (35%), Gaps = 44/341 (12%) Query: 43 LAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQI 101 + E +LA E V T+L +A K +IL ++GE + I+ + + + + Sbjct: 77 IYEMWLANYELTVKPTTLLNTKACFKNHILPVLGELYVEK-ISTFRCQKALNKWFSDL-- 133 Query: 102 PKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP---DP 158 + + V + V+N + NP K + K + + Sbjct: 134 -------------PKMYRKVYSLSSKVLDYAVNNDLIVKNPMKRVIKPKMQKDKREFTNF 180 Query: 159 LSREEFIRLIDAC---RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 S+EE + +DAC +N + + + YTG+R GE AL W DID +N T+ I + L+ Sbjct: 181 YSKEELNKYLDACKQKKNPRVYLFFRLLAYTGMRKGEALALKWSDIDFENETIRINKTLS 240 Query: 216 KD-----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQ 270 PKT+A +NR I + + I L+ R + G Sbjct: 241 LGTHNSLVIGTPKTKA-SNRTIQVDEQTIYYLQEWRKRQRKE--------LFKVGFNALT 291 Query: 271 KCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGA 330 +F ++ K A L+H + RHT+A AG Sbjct: 292 DDQLLFSN-------GNNQLIRPWLVQYWNKTIAKDARLKHITVHGFRHTHASLLFEAGT 344 Query: 331 NPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + ++GH+D VY + Sbjct: 345 PMQDVKERLGHSDITTTMNVYTHVTKSEKKKTAEKFARFME 385 >UniRef50_C4V5B3 Prophage LambdaCh01, site-specific recombinase phage integrase family protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V5B3_9FIRM Length = 377 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 67/378 (17%), Positives = 125/378 (33%), Gaps = 36/378 (9%) Query: 5 SSVCYAIKTGVFDY--AKQFP---SSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKT 58 + K G A++F + E + LT+ +L+ + V + Sbjct: 16 GQIVRKKKRGFLRRIDAEEFLLQINKAQQEGVFLTPEKLTLSTYLNTWLSSYAKVNVKAS 75 Query: 59 SLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 + Y A++K L +I ++ E LL + + G SA +V Sbjct: 76 TYAQYEAIVKKRLIPWAGGCDIKAITPMQIDEFYATLLQQGRAD------GKGGLSAKSV 129 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGIS-PLKESRTIPDPLSREEFIRLIDAC--RNQQ 175 LN V G L NP ++ K + S EE L++A N Sbjct: 130 LYIHRVLNEALGHAVQKGLLVKNPLLSVTNIPKAKKFKASAYSAEEIRSLLEAAAAENSF 189 Query: 176 AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA----KDRFTVPKTQAGTNRV 231 + ++ G+R GE L W ID + ++ I + K F+ PK+ + R Sbjct: 190 WQAAIALAAICGLRRGECLGLKWSKIDFDSQSITIDEQVIEIHHKIHFSTPKSTE-SIRT 248 Query: 232 IHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHF 291 IH L+ + KE + + + + V + G Sbjct: 249 IHAPAEVFAILKRRKEELDQHKEWLGNAY---------DEHDLV-------LCRGNGSPI 292 Query: 292 TVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 + + + + R +R + + RH+ A L +G + +GH+ + +Y Sbjct: 293 RPGNFTKAFKDFLARHNMRTIRFHDLRHSCASLMLQSGVAMKTASEILGHSSIAITADLY 352 Query: 352 GKWMSENNNAQVALLNTQ 369 M + + Sbjct: 353 THVMQKTKEEAAGKIGDY 370 >UniRef50_A6P1V8 Putative uncharacterized protein n=2 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P1V8_9BACE Length = 409 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 59/377 (15%), Positives = 139/377 (36%), Gaps = 39/377 (10%) Query: 3 LRSSVCYAIKTGVFDY-AKQFPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSL 60 ++ SV + + AK +R +D T+ E + + + + Sbjct: 36 IQKSVSARTQAECKEKLAKAIRDNR--GIPVNHNEDYTVAEWCRLWFETYSKPVIRPNTA 93 Query: 61 NTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 TY +I +I+ IG L + ++ ++ + T ++ + T S TV Sbjct: 94 KTYENMIENHIVPAIGGVKL-KRLTAIQIQKMYNDSKTNGRVQRFEK-KTDTALSGSTVR 151 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNL 179 L++ + V + NP + + + E+ + + Sbjct: 152 RIHMVLSSALKQAVKERIIPYNPCDNCRIPPKEKKEMAIIPSEKLGVYLSEAEKYGVLPM 211 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD----RFTVPKTQAGTNRVIHLI 235 + + + +G+R GEL AL W+D+++K+ + + + + + T PKT+ + R + L Sbjct: 212 FFLELSSGLRRGELLALRWDDLNVKDRILSVSKQVTRIDGELVITEPKTKN-SVRKVALS 270 Query: 236 KPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDS 295 + A+D L + +F G +++ D+ Sbjct: 271 QQAVDILVREHEQ--------------------HPDNPILFPSP------RTGGYWSPDA 304 Query: 296 IRQMWDAAIKRAGL-RHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKW 354 + ++ + +AG+ + + RHT+A +L++G + +++ +GH A Y Sbjct: 305 VSRINRKLLAKAGIEERVRFHDLRHTFATMALSSGVDVKTLSSMLGHYSAGFTLDTYTHI 364 Query: 355 MSENNNAQVALLNTQLS 371 ++ + + Sbjct: 365 TNDMQRGAAEKIGGFME 381 >UniRef50_C0QHJ7 Phage integrase family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QHJ7_DESAH Length = 360 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 63/366 (17%), Positives = 125/366 (34%), Gaps = 47/366 (12%) Query: 11 IKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNI 70 + ++ + ++ T ++A+++L K+ + ++ Y KN Sbjct: 32 TLKAAKEELRKVEDDLATGNYISPKKTPTFDQVAQEWLDHKKMNIRASTWAVYEGHTKNH 91 Query: 71 LSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQ 130 + I +++ + + G + T+ + +L +F Sbjct: 92 FPEFKNLKI-HQITIQRVEKFITD-------------RQAAGMNLSTLRKILVSLRQIFN 137 Query: 131 FGVDNGYLADNPFKGISPLKESRTI------PDPLSREEFIRLIDACRNQQAKNLWCVSV 184 V GY NP K L+ ++ ++ Q+ L+ +++ Sbjct: 138 LAVKRGYCPRNPLDYADMPKSQGEETDGADKIQILTHDQITAFLEVVTEQKYHVLFSLAI 197 Query: 185 YTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRS 244 ++G R GEL L W DI + + I+R+ RF KT+ G+NR I + + L+ Sbjct: 198 FSGARQGELLGLKWSDILWGDSQIHIQRSFNNQRFYDTKTK-GSNRKIDIGPVMLKKLKK 256 Query: 245 QMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDS-IRQMWDAA 303 VF G+ ++ + + + Sbjct: 257 WR------------------LACPPGGLDLVFPTAK-------GNPMNHNNMVNRYFLPG 291 Query: 304 IKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQV 363 +K A L + + RHTYA + G N +I Q+GH++ + VY M N Sbjct: 292 LKAAKLERIRFHDMRHTYASLLIDQGENIKYIQAQLGHSNPTVTLNVYAHLMKGTNREAA 351 Query: 364 ALLNTQ 369 L Sbjct: 352 CRLEDA 357 >UniRef50_D1PRY2 Site-specific recombinase, phage integrase family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRY2_9FIRM Length = 391 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 121/348 (34%), Gaps = 32/348 (9%) Query: 32 GEARQDLTIKELAEKFLALKETE-VAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLE 90 +T+ E +L + +A ++ + + I+ IL +G L + KE + Sbjct: 65 QPVNHAMTLAAYTEHWLRDIAPDKLAASTYSRDQQDIRRILPALGHYKLTD-LRKETIRA 123 Query: 91 VRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK 150 + + + S +V L ++ VD GYL NP + K Sbjct: 124 FYEAM------RSEPKLTDGQPLSERSVEGLHNTLCSILSGAVDEGYLTHNPAWRVYKPK 177 Query: 151 ESRTIPDPLSREEFIRLIDACRNQ--QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTM 208 R E ++I A Q + + + + + TG+R GE C L W DID ++ T+ Sbjct: 178 GVRKERPVADEETVQKMIAALETQSMKYEVYFKLVLATGMRRGEACGLRWSDIDWRHRTI 237 Query: 209 MIRRNL-----AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFRE 263 ++R + K PKT +G NR +++ K L++ E E Sbjct: 238 HVQRTVVKLSGQKIFTKEPKTASG-NRRVYISKEMCKLLKAWKQECAWQMEQAEGQTLTE 296 Query: 264 YGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLR-HRKSYQSRHTYA 322 E + GD + + +K GL + + RHT A Sbjct: 297 ---------------EDYLFRQPSGDPMVPTTFTFRFKKILKENGLPQNLSVHSLRHTNA 341 Query: 323 CWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + G + +A +GH+ +Y + L + Sbjct: 342 SLLIAQGVDVRTVAGLLGHSQPSTTLDIYAHAFDKTKREAQEKLGKVM 389 >UniRef50_C8WVH7 Integrase family protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WVH7_ALIAD Length = 391 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 69/359 (19%), Positives = 128/359 (35%), Gaps = 41/359 (11%) Query: 34 ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVR 92 + T+ E A ++ A K + + + TY V++ IL +G+ + S I + + Sbjct: 66 HAKSFTLHEWASRWFADKSSSLRPWTRRTYHHVLQAYILPELGKMPI-SKIEARHIQALY 124 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 ++L VTV+ L V GYL +PF + P + Sbjct: 125 RKLSNR--------------LKPVTVHRIHRVLKTCLLAAVKAGYLDKSPFLNVEPPEHK 170 Query: 153 RTIPDPLSREEFIRLIDACRNQQ--AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 LS + RL+ R + + ++++TG+R GE+ L W DIDL G + + Sbjct: 171 TPPKPVLSVNDAFRLLAWLREHRPTSYMAAFLAIHTGMRMGEIAGLQWRDIDLDTGVIQL 230 Query: 211 RRNLAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 R + + F P G+ R I + + +D LR + + Sbjct: 231 ERTRYRPKGGQDFLGPPKTFGSRRRIVVTREVVDELRRWKQSQQEIERES---------- 280 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL 326 + PE + S A K GL + RHT+A W L Sbjct: 281 ---------WTPESFVVRLPNSAPPSPASFNNAIQNARKELGLPPVSFHGLRHTHATWLL 331 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNEAMKN 385 +G + ++ ++GH+ + +Y + L + ++ ++ Sbjct: 332 ESGVDLKIVSERLGHSSITITADIYAHVTDALQREAIEKLQRMMRSRRTNNSGSDDEED 390 >UniRef50_A8T0M8 Putative integrase n=1 Tax=Vibrio sp. AND4 RepID=A8T0M8_9VIBR Length = 407 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 111/366 (30%), Positives = 181/366 (49%), Gaps = 24/366 (6%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 R ++ Y IK G+F YA FP S + ++R T E+ +K+L LK+ ++ ++ Y Sbjct: 51 RETIMYEIKIGIFRYAAHFPDSPYATEQSQSR---TFGEMVDKYLQLKQADLRSSTYKKY 107 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 ++ K + G S+++ E + E+R L+ GR A T+N Y Sbjct: 108 VSLFKITKNAYGANRSCSTLSPESVSELRALLI--------------KGRGARTLNTYFR 153 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVS 183 +N F + GY+ N + + +K +P + +E + +DAC +Q KN+ + Sbjct: 154 AINTFFGWLHKMGYVDRNFSEFMPSVKTPERNINPFTIDEINKALDACMQEQHKNMITLL 213 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRR-NLAKDRFTVPKTQAGTNRVIHLIKPAIDAL 242 YTG+R GE+C L WED+D +N + IRR PKT R + L+ PA++AL Sbjct: 214 AYTGLRTGEICGLAWEDVDFENKVLTIRRATFESRGLKTPKTD--RERTVDLMPPALEAL 271 Query: 243 RSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYG--DHFTVDSIRQMW 300 ++Q L+ + +V + FVF P+ + + D+F+ + +MW Sbjct: 272 QAQKKLSSHYPQKEHEVELAD-KTIRLDNIRFVFNPKATENLNAKTPYDYFSKTAPNKMW 330 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLT-AGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 RAG+ +R YQ RHTYA W L+ A N A++A QMGH++ M+ VYGKWM N Sbjct: 331 RNICIRAGIPYRNVYQLRHTYASWMLSYANVNIAYLAQQMGHSNFLMIASVYGKWMKNKN 390 Query: 360 NAQVAL 365 ++ Sbjct: 391 ASESEK 396 >UniRef50_C7GF85 Phage integrase n=2 Tax=Clostridiales RepID=C7GF85_9FIRM Length = 398 Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats. Identities = 69/369 (18%), Positives = 127/369 (34%), Gaps = 32/369 (8%) Query: 18 YAKQFPSSRNL---------EKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK 68 Y K P ++ D+T+ + ++ ++A ++ YR Sbjct: 37 YFKTLPEAKKWLADAKYEDTHNLIVTAPDMTVDKWFNYWIDNIICDLAPNTIRNYRERY- 95 Query: 69 NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAV 128 EKN+ I + +V+ + + T+ ++ + Sbjct: 96 -------EKNIQPLIGTMCIADVKPMHCKAVLNRM------ETEYAGSTIRQTYISMGTM 142 Query: 129 FQFGVDNGYLADNPFKGISPLKESR--TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYT 186 F+ V N +A +P G+ K R L+ EE + ++A + + + T Sbjct: 143 FKSAVMNDIIAKHPMNGVRYTKPVRAVDDIKYLTVEEQEKFLEAAERSHNYRQYALLLET 202 Query: 187 GVRPGELCALGWEDIDLKNGTMMIRRNL------AKDRFTVPKTQAGTNRVIHLIKPAID 240 G+R EL L W+ ID K T+ + ++L R PKT+ + R I L + A Sbjct: 203 GLRTAELIGLTWDAIDWKKRTLTVNKSLEYRHSRRYWRAGPPKTKK-SYRTIPLTERAYT 261 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 L+S KE + EY + + + ++ G+ S Sbjct: 262 ILKSCYDEKDTRKESEMLSQILEYTDSRTGEKKCLVMRDLVFINWRTGEPAKNSSYDTHL 321 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 AG++ + RHTYA ++ G P + +GHA + Y E+ Sbjct: 322 YKLCDEAGIKRFCMHALRHTYATRAIERGVQPKVLQQLLGHASIKTTMDRYVHVTDESLA 381 Query: 361 AQVALLNTQ 369 V Sbjct: 382 KAVQQFEAA 390 >UniRef50_B0PGN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PGN1_9FIRM Length = 402 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 65/374 (17%), Positives = 136/374 (36%), Gaps = 39/374 (10%) Query: 7 VCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLNTYRA 65 V + + D + + + E +T+ E ++++ + +L +Y Sbjct: 39 VLAKTQKELLDKLHRDLEAFQDVELTE-DSRMTLGEWLDRWMEDYGAATLRPNTLRSYEQ 97 Query: 66 VIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTN 124 I+ I +G K + S + + + ++ ++L ++ + + S V Sbjct: 98 FIRCYIKPYLGNK-IVSRVTRMDIQKLYRKLKHEGRVREHPEHGHE--LSDTMVLRIHAM 154 Query: 125 LNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC-RNQQAKNLWCVS 183 L+ + +A NP G K + L++E+ + A RN+ ++ + Sbjct: 155 LHRCLKDAEAAHVIARNPTDGAVVPKANHRPKQILTKEQMETFLAAVERNEIWRDFFYTE 214 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-----KDRFTVPKTQAGTNRVIHLIKPA 238 + TG+R GE+C L W+D D K GT+ I R++ + KT G R I L Sbjct: 215 LTTGLRRGEICGLMWQDFDEKAGTLKILRSVNVPKAGELEIGETKTSQG-RRTIRLPPST 273 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 + LR + ++F ++ + Sbjct: 274 VQRLRERKQH---------------------AVSQWIFPEPLAPE-----KPVRPSAAYY 307 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 ++ AGL + + RHT+A +LT+G + ++ +GH +A Y + Sbjct: 308 WMKRILREAGLPTIRFHDLRHTFATHALTSGVDAKTLSGILGHTNASFTLDTYTHVTPDM 367 Query: 359 NNAQVALLNTQLSE 372 ++ L + Sbjct: 368 QQEASHIVGGFLED 381 >UniRef50_C4FP65 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FP65_9FIRM Length = 357 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 63/349 (18%), Positives = 125/349 (35%), Gaps = 39/349 (11%) Query: 28 LEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKE 86 L + +T + E ++ LK V++ +L++Y+ +IK I+ IG L ++ Sbjct: 42 LAQCANYDNTITTERWCEYWIRLKTDTVSQNTLSSYQYIIKTYIVPFIGSIRLV-ELSAL 100 Query: 87 KLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGI 146 + + + SA T++ +T L A+ + V + ++ N + Sbjct: 101 NVRALMDSM---------------SHLSARTISYTLTVLRAILKQAVMDEIISKNVATLV 145 Query: 147 SPLKESRT-IPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKN 205 K+ R LS+EE ++ + + L+ ++ TG+R E+ L W+D++LK Sbjct: 146 KKPKQERKREMVTLSKEEVETFLEQIDDVEWHALFKLAFTTGLRRSEILGLTWDDVNLKQ 205 Query: 206 GTMMIRRNLAKDRFTVPKTQA----GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHF 261 T+ + + + + ++ + R I L I L T Sbjct: 206 KTLTVNQTVLRIDEVTTISKTTKNSSSRRSISLDDKTIAELLKLRTCVDK---------- 255 Query: 262 REYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTY 321 R + VF +G+ + G + +RHT+ Sbjct: 256 RRLKAPNWRNNNLVFPG-------KFGNPRDPAKVSLKCKKFATAIGRPDFTMHDTRHTH 308 Query: 322 ACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 A L AG N + ++GH+ Q Y V ++ Sbjct: 309 ATLLLEAGVNFKVVQMRLGHSSYQQTMDTYSHVTPIMEADVVEKISNIF 357 >UniRef50_C3EB65 DNA integration/recombination/invertion protein n=1 Tax=Bacillus thuringiensis serovar pakistani str. T13001 RepID=C3EB65_BACTU Length = 367 Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 79/375 (21%), Positives = 152/375 (40%), Gaps = 37/375 (9%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLNTYRAVI 67 K F + + ++ + Q + K+ +++ +T + KT+L Y ++ Sbjct: 22 AKNKRQAEKELALFIAEIEVGEYIK-PQKMLFKDFFAEWIQKYAKTNLQKTTLFNYIHIL 80 Query: 68 K-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLN 126 +I+ ++G K + I L+ + + G + T+N+ T + Sbjct: 81 DTHIIPVLGNKKVED-IKTIHLVTLFH------------GKLPAKGLATTTINSIHTRVK 127 Query: 127 AVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACR--NQQAKNLWCVSV 184 +F+ + G++ NP G+S LK R P ++E ++++ K L+ +++ Sbjct: 128 MLFKKACEWGFIKKNPMDGVSKLKNKRQELQPYDQKEIVKILALTEQEKDMNKMLFQLAI 187 Query: 185 YTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHLIKPAID 240 TG+R GEL L W ID +N + I++ + + PKT + + R+I + Sbjct: 188 VTGMRRGELLGLEWGHIDFQNDMVHIQQTIVRAGKEILLKEPKT-SKSKRIISIPPTFTT 246 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 L+ + D+ E ++ F+F G T + W Sbjct: 247 KLKQYKKYCAEKRIACGDL-------WEGEEHLFLFS-------TWNGRPLTPEKASTRW 292 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNN 360 ++ GLRH K + R T+A + LT G N I+ ++GH+D Q +Y + E N Sbjct: 293 QYFTQKHGLRHIKLHGLRSTHATYLLTQGENLKVISERLGHSDIQTTMNIYAHVLEEVNK 352 Query: 361 AQVALLNTQLSEFAP 375 T L+ P Sbjct: 353 KASNHFETLLTHTMP 367 >UniRef50_Q9F0J7 Integrase-like protein n=7 Tax=Staphylococcus RepID=Q9F0J7_STAAU Length = 378 Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 66/383 (17%), Positives = 125/383 (32%), Gaps = 44/383 (11%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLT-IKELAEKFLALKETEVAKTS 59 G+ + + KT + + + G D+T KE+ E +L + V +++ Sbjct: 27 GKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLNNDITTFKEVYELWLEQYQNTVREST 86 Query: 60 LNTYRAVIKN-ILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 + IL + + I +V + Y + Sbjct: 87 YQRVLTLFDTAILEHFQDVPI-KKITVPYCQKVINKWNKKYSD----------------I 129 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI----PDPLSREEFIRLIDACRNQ 174 + VF++ V + DNPF ++ S +E + + + Sbjct: 130 KAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELKQFLTFVEDD 189 Query: 175 Q-AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD-----RFTVPKTQAGT 228 ++ +TG R GEL AL W DID T+ I + A+ PKT+ + Sbjct: 190 PLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKLVIQEPKTK-SS 248 Query: 229 NRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYG 288 +R I + L+S T R V +YG K VF Sbjct: 249 HRTISIDDKTASVLKSWRTHQR--------VESLKYGHNTSDKHQHVFT------TVRDN 294 Query: 289 DHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVF 348 + + D ++ + K + RHT+ AG + + +++GH D + Sbjct: 295 KPLYPEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTM 354 Query: 349 QVYGKWMSENNNAQVALLNTQLS 371 +Y + + ++ Sbjct: 355 DIYAHVTEKQRDQVADKFAKYIN 377 >UniRef50_A6GR01 Phage integrase n=3 Tax=Proteobacteria RepID=A6GR01_9BURK Length = 450 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 104/403 (25%), Positives = 171/403 (42%), Gaps = 66/403 (16%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQD------------------------ 37 + + + IK G F Y FPSSRNLEK + Sbjct: 3 RVMAGIVAEIKKGTFRYRSAFPSSRNLEKIEALETEQYQPTSPMVSIPMANQSVRQAVDN 62 Query: 38 ------LTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEV 91 T E A+KF+ E+ ++++ T R +++ L K + SSI K+ LLE Sbjct: 63 ISSSGHPTFTEFAQKFIEENESLWKRSNIRTKRDILEKWLIPQFGKRVISSITKQDLLEF 122 Query: 92 RKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE 151 R L K+ SA +N+ MT++ V + + P++ I ++ Sbjct: 123 RSVLA------KAPGKKPGTTMSASRINHVMTSVKQVLDEAA-DRFNFTTPYQNIKRMRI 175 Query: 152 SRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 +T P + EE +I CR ++ + V +TG+RPGE+ L W+ ID + + IR Sbjct: 176 KKTDVTPFTIEEVEMIIKYCRED-FRDYFTVKFFTGMRPGEIHGLKWKYIDFEKRLITIR 234 Query: 212 RNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 + D PKT A +NR I + +AL++Q +T K Sbjct: 235 ETIVDDYEETPKT-ADSNRDIQMAPQVYEALKAQWGVTG-------------------TK 274 Query: 272 CTFVFQPEVSARVKNYGDHFTVDSI-RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGA 330 +VF G T ++ ++W ++ GL+ R YQ+RHT+A L AG Sbjct: 275 SPYVFAN-------CNGGPLTNRNMSNRVWYPMLRSLGLKLRTPYQTRHTFATLMLAAGE 327 Query: 331 NPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEF 373 +P +IA QMGH+ +M+F+VY +++ + L+ Sbjct: 328 SPEWIAFQMGHSSTEMLFKVYSRYVPNLTRRDGSAFERMLAAN 370 >UniRef50_A8UWI5 Phage integrase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWI5_9AQUI Length = 369 Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats. Identities = 80/375 (21%), Positives = 139/375 (37%), Gaps = 60/375 (16%) Query: 18 YAKQFP---SSRNLEKF------------GEARQDLTIKELAEKFL-ALKETEVAKTSLN 61 K FP + R EK ++ E++L + V ++ Sbjct: 22 KRKWFPAGTTKREAEKVLAEKLAELNAGSSVLPPEVRFSFFCEEWLSKYAKGSVKPSTFR 81 Query: 62 TYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 Y +I+ + + G+K L S I L E L+ S TV Sbjct: 82 RYEGIIRNHFMPRFGDKKL-SRITTGMLQGYVAERLSQ--------------VSPTTVLQ 126 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 + L +F+ GY+ NP + + + + D L+ EE L++ ++ + + Sbjct: 127 EVVLLKEMFKHAQSWGYIKHNPAQNLQRPRREKKEIDILTPEEVEFLLENT-HEHYRVAF 185 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAID 240 +V TG+R GEL L W+DID + + +RR L F PK++ + + + ++ Sbjct: 186 LTAVMTGLRAGELWGLKWDDIDWHSKQIYVRRTLWNGEFHTPKSR-HSIGKVDMPDVLVE 244 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 L+ R K VF + + + + + Sbjct: 245 ELKLW------------------EIRCPPNKYNLVFPSPKGEPSE------HQNVVNRYF 280 Query: 301 DAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN- 359 A++RAGLR + RHT A + AG N +I Q+GHA +YG + + Sbjct: 281 KPALRRAGLRVVSFHSLRHTNASIRIRAGQNIKYIQRQLGHASINTTLDIYGHLFEDMDF 340 Query: 360 -NAQVALLNTQLSEF 373 +Q LL+ L Sbjct: 341 NRSQAQLLDGVLRNS 355 >UniRef50_A4J1T6 Phage integrase family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1T6_DESRM Length = 383 Score = 273 bits (699), Expect = 8e-72, Method: Composition-based stats. Identities = 59/367 (16%), Positives = 118/367 (32%), Gaps = 38/367 (10%) Query: 11 IKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLNTYRAVIKN 69 K + + ++ E + + ++L + +A T+ +Y +++ Sbjct: 38 TKKEAEKEMARLIAEYETGQYIE-PSKTCLGDYMLRWLEDYGKPNLAPTTYYSYSKIVEK 96 Query: 70 ILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVF 129 + + + L + L S TV + L Sbjct: 97 HIIPSIGSIIIEKLQPMHLQRYYSQKLQT--------------LSNRTVQYHHRVLKEAL 142 Query: 130 QFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVR 189 V L NP + K + + R+I A ++ + +V+TG+R Sbjct: 143 SHAVQWQLLNRNPADAVQAPKNKQKEIELPDLSNIDRMIQASKDHPDHIIIISAVFTGMR 202 Query: 190 PGELCALGWEDIDLKNGTMMIRRNLAK-----DRFTVPKTQAGTNRVIHLIKPAIDALRS 244 GEL L W+D+D + +R L + FT PK++ + R I + + L+ Sbjct: 203 RGELLGLRWQDLDFDKNLLYVRNTLQRLPDKGKFFTEPKSKK-SRRQIIIPHFLTNLLKD 261 Query: 245 QMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAI 304 + + ++ Q VF + G ++ + A + Sbjct: 262 HRKKQLEERFKLGHLY---------QDHDLVFP-------RPDGTPADPGTVSHRFKALV 305 Query: 305 KRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVA 364 + GL + + RH +A L NP + ++GH + VY + N Sbjct: 306 DKIGLSGLRFHDLRHFHATLLLAENINPKKVQERLGHQTISLTLDVYSHLIPSMQNEIAE 365 Query: 365 LLNTQLS 371 L Sbjct: 366 KLEEIYG 372 >UniRef50_A7VZ12 Putative uncharacterized protein n=2 Tax=Clostridium leptum DSM 753 RepID=A7VZ12_9CLOT Length = 414 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 57/339 (16%), Positives = 125/339 (36%), Gaps = 20/339 (5%) Query: 29 EKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKN-ILSIIGEKNLASSINKEK 87 + GE ++ + +L + + V T+ +Y +++K I K + Sbjct: 70 AEIGELCSNMLFADYLLGWLEIVKVRVKPTTFGSYESMVKQTIEPYFRNKPIT------- 122 Query: 88 LLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS 147 L ++ + + K +V +Y ++ ++ + +A N + Sbjct: 123 LKDLEARHIQQFYSEKL------KTVKPNSVIHYHAVIHQALKYAMKTDLVAQNVAMKVD 176 Query: 148 PLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGT 207 K++ P L E L D + + + V+ + G+R GE+ L W+ ID + GT Sbjct: 177 RPKKNDFQPVFLDAAELQHLFDVVKGTKLELPVLVAAFYGLRRGEVLGLKWDAIDFERGT 236 Query: 208 MMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRT 267 + I+R + G +VI + + L +E+ +V + Sbjct: 237 LTIKRTVTSVNVG------GKTQVIEQESAKTKSSMRTLPLVGRFREYFAEVKAAQELNK 290 Query: 268 EKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLT 327 + + ++ + V G+ D + + A I+R G++ + + RH+ A L Sbjct: 291 QVCGNCYNYEYDGFVFVDELGERMKTDYLTSQFPAFIQRHGMKKMRFHDLRHSCASLLLA 350 Query: 328 AGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALL 366 G I + +GH+D +Y + + + Sbjct: 351 NGVPLKQIQDWLGHSDFSTTANIYAHLDYSSKLSSAQAM 389 >UniRef50_Q252J3 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q252J3_DESHY Length = 395 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 64/367 (17%), Positives = 129/367 (35%), Gaps = 37/367 (10%) Query: 29 EKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEK 87 E + D+ + +K+L + +AKT+ Y+ ++ I E N+ Sbjct: 56 EGKRNPQADVLFTDYLQKWLTQAKPTIAKTTFKGYQTMLDGRISRYFTELNIT------- 108 Query: 88 LLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS 147 L EV + + + G + TV +Y L Q V + NP + Sbjct: 109 LGEVTPQHIQDFHQSIF-----DEGHTPNTVIHYHAVLRRALQNAVKKEIIDSNPADRVD 163 Query: 148 PLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGT 207 K++ S EE + L D + + ++ Y G+R E+ L W+ I+L+ T Sbjct: 164 RPKKNVYHAQFYSAEEMMALFDEISDDPLEICVKLAAYYGLRRSEVLGLKWDAINLEQKT 223 Query: 208 MMIRRNLAKDRF---------TVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIID 258 + I+ + +D V KT+ + R + L+ L ++ + ++ Sbjct: 224 ISIKHKVIEDTVDGKSIAVGEDVLKTK-SSFRTLPLLPSVEKLLLAEKEKQEMYRKLFKR 282 Query: 259 VHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSR 318 + R+Y + G + + + + A+++A L+ + + R Sbjct: 283 SYCRDYL--------------DYICLDQAGKLMRPNYVTEHFSWALEKADLKKIRFHDLR 328 Query: 319 HTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMP 378 H+ A L G + I +GH+ +Y +++ P Sbjct: 329 HSCASLLLANGISMKQIQIWLGHSTFSTTADIYSHLDFHAQIESGLVMDGMFERNRVAEP 388 Query: 379 HNEAMKN 385 A N Sbjct: 389 TGLAAAN 395 >UniRef50_UPI0001C37C27 integrase family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37C27 Length = 391 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 60/386 (15%), Positives = 136/386 (35%), Gaps = 47/386 (12%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLNT 62 R + + V D + + + E +T+ E +L + EV T+ Sbjct: 34 RRYIYGQTRKAVADKMHIILNQIHTNTYIE-PCKVTLYEWLCTWLDQYCKIEVKLTTYVN 92 Query: 63 YRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIV--TQPGRSAVTVNN 120 Y + +++ ++I KL ++ ++ + K+ + G S T+ N Sbjct: 93 YDTYV--------HRHIKNTIGGYKLCDLNTSIMQSFFNEKAENGKLHSSGGLSPKTIKN 144 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 ++ V + NP ++ K ++ L+ +E +L +A + + + Sbjct: 145 MHDMMHRALDKAVHLDMIIKNPTDFVTLPKRRKSEMRFLTIDEQKKLQEALKGDRLEMPV 204 Query: 181 CVSVYTGVRPGELCALGWEDIDLK---NGTMMIRRNLAKDR-------------FTVPKT 224 +++YTG+R GE+ L W+ + ++ + + + + + + PKT Sbjct: 205 LLALYTGMRQGEIFGLKWKYVHIESTDRAWLRVVQAVNRFSNRTDDGKRKTFLSLSEPKT 264 Query: 225 QAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARV 284 + R I L+ + L + Sbjct: 265 -PHSIRTIPLMPYIAERLTEYKCEQEQHFKDNGL------------------PMSEMVFT 305 Query: 285 KNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADA 344 G+ + ++ + +KR GL + RHT+A +L +G N ++ +GH+ Sbjct: 306 TKNGNLVDPRNFQRDFKLLLKRNGLHEINVHGLRHTFATRALESGMNVKTLSKILGHSSV 365 Query: 345 QMVFQVYGKWMSENNNAQVALLNTQL 370 Y + +++ LN+ L Sbjct: 366 AFTLDTYAHVTEDLKFEEMSALNSFL 391 >UniRef50_Q1ZMG0 Phage integrase n=2 Tax=Photobacterium RepID=Q1ZMG0_PHOAS Length = 391 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 103/385 (26%), Positives = 166/385 (43%), Gaps = 52/385 (13%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFG-------------EARQDLTIKELAEKFLA 49 L + + I G F+Y K F S+ EKF A + E A+ +LA Sbjct: 41 LANKIEAEITLGCFEYQKYFSQSKLCEKFRAMEHRERASSQYYNAPYSPNLAEFADIWLA 100 Query: 50 LKETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIV 108 K+ E +K VI K +L G + ++S I K+K+L+ R L Sbjct: 101 EKKIEWSKGHYIDVSGVIEKYLLPAFGNQKISS-ITKQKILKFRSILSQ-------VPGR 152 Query: 109 TQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLI 168 S+ +N+ MT L + + Y ++P+K I LK SRT+ DP +E + Sbjct: 153 KGEYLSSSRINHIMTPLRQLLNEAA-DRYDFNSPWKNIKALKVSRTVIDPFHLDEVESFL 211 Query: 169 DACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGT 228 +A + K + +TG+R GE+ L W+DIDL N T+ +++ L+++ KT+ + Sbjct: 212 NAVPDA-YKTYYTTRFFTGMRTGEIDGLQWKDIDLVNKTIKVKQALSRNELKELKTE-SS 269 Query: 229 NRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYG 288 R I LI ID L+ + + + G Sbjct: 270 YRDIDLIDRVIDVLQKHKRSK--------------------------YTTSTFVFINSKG 303 Query: 289 DHFTVDSIRQ-MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 F + + +W + AGLRHR YQ+RHTYA L +G +P +IA QMGH+ M+ Sbjct: 304 KPFCYPVVSRTIWYPTLDAAGLRHRNPYQTRHTYATLLLASGESPEWIAKQMGHSTTTML 363 Query: 348 FQVYGKWMSENNNAQVALLNTQLSE 372 F+VY +++ + L+ Sbjct: 364 FRVYSRFVPNLTRRDGSAFEKFLNN 388 >UniRef50_C8X726 Integrase family protein n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X726_NAKMY Length = 371 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 67/367 (18%), Positives = 133/367 (36%), Gaps = 39/367 (10%) Query: 8 CYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVI 67 K ++ + R + LT++ ++L + V +++ Y + Sbjct: 39 YVRTKADAKAKLREM-NDRAAKNMPAPPPSLTVEAYLGEWLTHMKQHVRRSTWVAYESNA 97 Query: 68 K-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLN 126 + +I+ IG K L+ L+ + + + G+ TV L Sbjct: 98 RLHIVPRIGRKKLSQ--------------LSVRDVRLMIDGLRKDGKGKRTVQYVHATLR 143 Query: 127 AVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYT 186 A + + N K + + + T +PLS E RL+ A R+ + LW V + Sbjct: 144 AALEHAYREELVTRNVAKMVRVERPTPTPKEPLSVAEARRLLTATRDDEDHALWVVMLLL 203 Query: 187 GVRPGELCALGWEDIDLKNGTMMIRRNLAK--DRFTVPKTQA-GTNRVIHLIKPAIDALR 243 G+R E+C L W+++DL+N T+ + ++ + + T+ + R + L AL Sbjct: 204 GLRRSEVCGLRWDNVDLENRTLSVTHSVQRVDGKLRELPTKTRRSTRTVPLPAMVHQALV 263 Query: 244 SQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAA 303 + + +++ V G ++ + W Sbjct: 264 THRAAMMPTSQYL--------------------PEPVYVFGTKIGTPMEPRNLTRRWVTL 303 Query: 304 IKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQV 363 +R G+R + RH+ L G +P + +GH+ +M VYG E + Sbjct: 304 AERQGIRRVPLHALRHSCVSLLLAQGVHPRTVMEIVGHSAIEMTMNVYGHVNLETQRRAL 363 Query: 364 ALLNTQL 370 L+ L Sbjct: 364 DELDRTL 370 >UniRef50_Q0H247 DNA integration/recombination protein n=6 Tax=root RepID=Q0H247_9CAUD Length = 394 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 62/388 (15%), Positives = 134/388 (34%), Gaps = 50/388 (12%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK 68 + K A + N + + ++ K+ A+++LA+ +++ + + Sbjct: 38 FKTKKEAQLAAAKLYDEINNGGYVK-DTNILFKDFAQEWLAIYSETAKISTIRARKHELG 96 Query: 69 NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAV 128 +++ G L + ++ ++ +L + G + T++ T + Sbjct: 97 HLMRYFGNLKL-KDVTRKMYQDMLLDL-------------KKKGYADNTLDGIHTTGRMI 142 Query: 129 FQFGVDNGYLADNPFKGISPLKESR---------TIPDPLSREEFIRLIDACRNQ---QA 176 F+ ++ + NP + K+ + L + E + + Sbjct: 143 FKKAMELELINSNPTEYAKVPKQKKTVEDIESGNKDMKFLEKHELALFLKTAQEHGLAMD 202 Query: 177 KNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA------KDRFTVPKTQAGTNR 230 ++ YTG+R GEL AL W+DI+ K T+ I + L + +P G+ R Sbjct: 203 YVVFSTLAYTGMRLGELLALQWKDINFKEHTIAITKTLYSPRNNERYYQLLPPKTQGSIR 262 Query: 231 VIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDH 290 I + I L+ K + +++ FVF + G Sbjct: 263 TIKVDPNIISLLKKHKAEQNEIKLRMGELYH---------DLGFVF-------ARPSGFP 306 Query: 291 FTVDSIRQMWDAAIKRAGL-RHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQ 349 I ++ A + +H + RHT+ + AG I ++GHAD + Sbjct: 307 EVPKKIEIRMKRLLRIANIHKHVTPHSLRHTHTSLLIEAGVGIKEIQQRLGHADIETTMN 366 Query: 350 VYGKWMSENNNAQVALLNTQLSEFAPTM 377 +Y + + +S F + Sbjct: 367 IYAHLTKDLEERASQKFSELMSNFIKNL 394 >UniRef50_UPI0001C35B62 integrase family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35B62 Length = 406 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 66/381 (17%), Positives = 125/381 (32%), Gaps = 26/381 (6%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 R + ++ + D+T+ + ++ ++A + Y Sbjct: 33 RKERYFETLPEAKNWLADARYEERHNLIVTSP-DMTVDKWFTYWIENIVCDLAPNTKRNY 91 Query: 64 RAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 + K NI +IG +A + V + + + T+ Sbjct: 92 QERYKWNIQPVIGAMCIAD-VKPMHCKAVLNRM--------------ETTYAGSTIRQAY 136 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKESR--TIPDPLSREEFIRLIDACRNQQAKNLW 180 + + + V N +A +P G+ K R L+ EE + ++A + Sbjct: 137 ITMGTMLKSAVMNDIIAKHPMNGVRYTKPVRAVDDIKYLTVEEQEKFLEAAARSHNYRQY 196 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL------AKDRFTVPKTQAGTNRVIHL 234 + + TG+R E+ L W+ ID KN T+ + ++L R PKTQ + R I L Sbjct: 197 ALLLETGLRTAEMIGLTWDAIDWKNRTLTVNKSLEYRHSQGYWRAGPPKTQK-SYRTIPL 255 Query: 235 IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVD 294 A L+S K EY + + + ++ G+ Sbjct: 256 TDKAYSILKSCYDEKDSRKSSETLSQVLEYIDSRTGENKCLIMRDLVFVNWRTGEPAKNS 315 Query: 295 SIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKW 354 S AG++ + RHTYA ++ G P + +GHA + Y Sbjct: 316 SYDTHLYKLCDEAGIKRFCMHALRHTYATRAIERGVQPKVLQQLLGHASIKTTMDRYVHV 375 Query: 355 MSENNNAQVALLNTQLSEFAP 375 E+ + + Sbjct: 376 TDESLVNAIRQFQQATPPVSK 396 >UniRef50_D0ADR3 Predicted protein n=2 Tax=Enterococcus faecium RepID=D0ADR3_ENTFC Length = 382 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 71/385 (18%), Positives = 141/385 (36%), Gaps = 49/385 (12%) Query: 2 ELRSSVC-YAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 ++R++ + K A ++LT +E+ + ++ E V ++S Sbjct: 31 QVRTTRRGFKTKKEA-QLALTKLQLEYENNGLNKTKELTFQEVYDLWIVNYEQTVKESSF 89 Query: 61 -NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 T +IL G + + I + + E + + + Sbjct: 90 VKTKEQFANHILPAFGAYKI-NKITIDIAQKFANEKVKKFVLY----------------R 132 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLKE-----SRTIPDPLSREEFIRLIDACRNQ 174 ++ N + + + + GYL DNP K I+ K + S+EE + + + Sbjct: 133 EFINNASRICDYAIKLGYLQDNPLKKITVPKRKVSVHEEDTLNFFSKEELEIFLKSVEKK 192 Query: 175 ---QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR-----FTVPKTQA 226 + + + +TG+R GEL AL W+DID + + I + LA+ + PKT+ Sbjct: 193 KDIRMYSFFRTLAFTGMRVGELLALTWKDIDFNDNYIKINKTLARGKNRRLYVEQPKTKN 252 Query: 227 GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKN 286 + R I + ++ L+ R G K VF + + Sbjct: 253 -SKRDIPVDDETMNILKKWRLEQRK--------WLLTLGINTLSKNQLVFSNQKN----- 298 Query: 287 YGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 ++ + R+ + IK+ L+ + RHT+A L AGAN + ++GH+ Q+ Sbjct: 299 --EYLQLSKPRKWLEVIIKQNNLKRITIHGLRHTHASLLLEAGANIKDVQERLGHSSIQI 356 Query: 347 VFQVYGKWMSENNNAQVALLNTQLS 371 +Y + + Sbjct: 357 TMDLYIHITDKRKEKTATQFAKYIG 381 >UniRef50_C9AMW3 Phage integrase n=8 Tax=Enterococcus faecium RepID=C9AMW3_ENTFC Length = 378 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 61/349 (17%), Positives = 125/349 (35%), Gaps = 43/349 (12%) Query: 37 DLTIKELAEKFLALK-ETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 D +K+ + ++ + + + YR IKN ++ + K+KL ++ L Sbjct: 61 DTRVKQYLDFWMKEYVKLNLKYNTYENYRFTIKN--------HINGYLGKKKLTDLSPAL 112 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGV-DNGYLADNPFKGISPLKES-- 152 L + + + G S T+ + L V G + NP + K Sbjct: 113 LQNFINAEF-----KKGYSKKTMTITHSVLKNALNMAVYPWGLIKQNPMLYVKIPKYEER 167 Query: 153 ---RTIPDPLSREEFIRLID-ACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTM 208 + +S E+F +++ + YTG+R GE+C L W+++D NGT+ Sbjct: 168 PTTKKDLKIISLEDFDHMLEITPEGHPFYIPLNIGFYTGMRVGEVCGLTWDNVDFSNGTI 227 Query: 209 MIRRNLAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY 264 + + + K+ + PKT + +NR I + + + L+ ++ ++ Sbjct: 228 TVEKQMVKNDGAWVYGTPKT-SSSNRTIFIGQTLLAILKKHKKQQLENRMKYGKLYIDSN 286 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACW 324 K+ V V + + ++ + RHT+A Sbjct: 287 AVCTKEDGGLVTPSVVKWNTRRISNALSLS-----------------FNFHSLRHTHATL 329 Query: 325 SLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEF 373 L GA I+ ++GH+ + Y + N V ++ Sbjct: 330 LLENGAKMKEISERLGHSRISITMDTYSHVTDKMRNQTVDIMENLRKNS 378 >UniRef50_Q8ERR7 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ERR7_OCEIH Length = 378 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 65/378 (17%), Positives = 133/378 (35%), Gaps = 52/378 (13%) Query: 17 DYAKQFPSSRNLEKFGEA------------RQDLTIKELAEKFL-ALKETEVAKTSLNTY 63 F ++ E + + + + + T + +T+ + Sbjct: 32 KKLSGFTRKKDAEDALKKLIIELENDGYLEPSKESFQSFLQHWFYTHYITSIKRTTHSNR 91 Query: 64 RAVIKNIL---SIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 +IK L + EK + S I E++ L G S + Sbjct: 92 DYLIKKHLIEDNPFAEKAI-SDITTEEIDYFYHYKL-------------GKGYSTSYIRK 137 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 L+ F V ++ NP +P + S+++ + ++ ++ L+ Sbjct: 138 MHQMLHLSFAQAVKWRKISYNPVVNTTPPRVQTKQVSIWSKDQVKQFLETSNLERLYILF 197 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR-----FTVPKTQAGTNRVIHLI 235 +++YTG+R GEL L W DI+++ + I RNL + FT PKT + RVI + Sbjct: 198 LLAIYTGMRKGELLGLKWSDINMEKECIHIHRNLCYIQNQGYFFTTPKT-VRSTRVIPIS 256 Query: 236 KPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDS 295 D L+ + KE ++ G + Sbjct: 257 SLISDQLQCIKEKQQCEKELAGPS----------------YEDNDLVICTALGKVQDPRN 300 Query: 296 IRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 + ++++ IK A + + + RHT+A ++ G + ++++MGH + +Y + Sbjct: 301 VTRVFERCIKNANVPKIRFHDLRHTHASILISEGVDIVKVSSRMGHTSPKTTLDIYAHVV 360 Query: 356 SENNNAQVALLNTQLSEF 373 +N + L Sbjct: 361 PNTDNEVATIFEKSLQNS 378 >UniRef50_D2BLD3 Phage integrase n=4 Tax=root RepID=D2BLD3_LACLK Length = 399 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 72/385 (18%), Positives = 133/385 (34%), Gaps = 35/385 (9%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDL-TIKELAEKFLALKETEVAKTSL 60 ++++ + KTGV + ++ + + ++ L T E+AE F L + + S+ Sbjct: 34 QIKTDIRGRTKTGVKNELERLKNEFKKNGNTKGKESLETFGEVAESFFELYKLQQKVGSI 93 Query: 61 NTYRAVIKNI-LSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 R+ + + G K + S I + + E P G S Sbjct: 94 RQMRSNLDTYAIPAFGNKRI-SKITTAHIQKQVIEWAKNAAEPLGGKQKRDVG-SGKDYK 151 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLK----ESRTIPDPLSREEFIRLIDACRN-- 173 + +N +FQ + G + NP + K + ++ E L + Sbjct: 152 LQLNVINRIFQHALSLGIIDRNPCHSVIIPKVKIDKPNKEVKFYTKTELSELFSHIESLD 211 Query: 174 ------QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN-LAKDRFTVPKTQA 226 Q L + V +G+R GE AL W D+DL N T+ + + + + Sbjct: 212 NTKWSTQYFNALIRLLVASGLRIGEAMALEWFDVDLDNQTVSVSKTTVQRTVIQDTPKTN 271 Query: 227 GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKN 286 +NRVI + A+ L+ + + + H + VF Sbjct: 272 KSNRVISIDSKAVSTLKRWYFFQKKHFMSLGNPHQ-----------SLVFP-------TW 313 Query: 287 YGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 G+ + A L + RH++A L AG I ++GH+ QM Sbjct: 314 QGNVMDYHGLNYRLKKIEDAAKLTSLSFHGFRHSHASLCLNAGMTYKVIQERLGHSTLQM 373 Query: 347 VFQVYGKWMSENNNAQVALLNTQLS 371 +Y E N ++ L + Sbjct: 374 TMDLYSHLEPEKKNKELELFTKYAN 398 >UniRef50_B4V6V4 Phage integrase n=6 Tax=Streptomyces RepID=B4V6V4_9ACTO Length = 426 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 75/368 (20%), Positives = 132/368 (35%), Gaps = 35/368 (9%) Query: 34 ARQDLTIKELAEKFLA-LKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEV 91 A D T+ +L + + + + Y A I+ ++ +G K LA + + Sbjct: 74 AAADSTVSAYLAYWLDGVAVHHLRENTHTRYAASIRLHLNPGLGVKKLAR-LTTRDVRTF 132 Query: 92 RKELLTGYQIPKSNYIVTQ-----------PGRSAVTVNNYMTNLNAVFQFGVDNGYLAD 140 L T Q N + S +TV L + + V L Sbjct: 133 LDGLRTTCQCCAQNRDSVRRSCCAIGQCCGKRLSPLTVTYVHAVLKSALEHAVREDELPR 192 Query: 141 NPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWED 200 N + + PL+ E +L+ A + L+ +++ TG+R GEL L WED Sbjct: 193 NVARNVKTTTPRPRRFQPLTAAEARQLLHAANGDRLNALYELALRTGLRKGELLGLHWED 252 Query: 201 IDLKNGTMMIRRNLAKDR---FTVPKTQA-GTNRVIHLIKPAIDALRSQMTLTRLSKEHI 256 +DL GT I R+L + R TV T+ ++R I L +++L++ + ++ Sbjct: 253 LDLDGGTATIHRSLQRTRSQGLTVLNTKTLASDRRIALPTECLNSLKTHQERQQEERQTA 312 Query: 257 IDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQ 316 + G ++ + + + A LR + + Sbjct: 313 GTS----------------WTDNGLVFTTPNGQPLDPTNLTRRFRRLLHGAELRTIRFHD 356 Query: 317 SRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEF-AP 375 RH+ A L G + I +GHA + VY + + L + LS AP Sbjct: 357 LRHSTATLLLEQGVDLVVIKELLGHAHIGVTAGVYAHVRLRLQHQAIDTLGSILSPTDAP 416 Query: 376 TMPHNEAM 383 P A+ Sbjct: 417 DDPSTAAV 424 >UniRef50_C2NSI2 DNA integration/recombination/invertion protein n=2 Tax=Bacillus cereus group RepID=C2NSI2_BACCE Length = 382 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 121/355 (34%), Gaps = 34/355 (9%) Query: 24 SSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSI 83 ++ L LT ++++ + + +T+ ++ I N++ I Sbjct: 56 KAKMLSGERSDLSKLTYAAYVDEWMKERTFHLQETTYEIHKTYIANVIKPRLGHFQMREI 115 Query: 84 NKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPF 143 + + EL G S TV+ ++A + + +NP Sbjct: 116 EPIHMQKFVNELA------------IDIGYSPATVHLIYRIVSASLKKAKVLKLIDENPT 163 Query: 144 KGISPLKESRT-IPDPLSREEFIRLIDACRN----QQAKNLWCVSVYTGVRPGELCALGW 198 GI+ K +T + + EE I+ +N + +++ TG+R GE+ L W Sbjct: 164 IGITLPKLRKTSEINVWTLEEVNHFINEGKNVYRSTRMYICCVIALLTGMRQGEIMGLRW 223 Query: 199 EDIDLKNGTMMIRRNLAK-DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHII 257 +DID +N + IR+ L + + V + R +H I L + + + Sbjct: 224 KDIDFENRIIYIRQTLTQSGKIKVGAKNNASIRNVHFPIKLIGELELHRETVKKERLYHG 283 Query: 258 DVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQS 317 ++ G+ + R + ++ GL + + Sbjct: 284 KD----------------YEDNNLVICARKGNPLIPKNGRIEFYNLTEKLGLPKIRFHDL 327 Query: 318 RHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 RHT+A + N I+ ++GH D Q Y + L+ E Sbjct: 328 RHTHATMLIQQNVNVKLISERLGHTDIQTTLNTYSHVLPNMQREVADKLDVMFGE 382 >UniRef50_B6W9U7 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W9U7_9FIRM Length = 370 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 72/367 (19%), Positives = 132/367 (35%), Gaps = 52/367 (14%) Query: 17 DYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNT-YRAVIKNILSIIG 75 Q ++ ++ ++ ++T+ EL + +L L E V T+ Y +IL +G Sbjct: 41 KKQAQIEYAKLKKQGVKSICNITLNELLKDWLPLYEPTVKYTTYTRVYGVFKNHILPYLG 100 Query: 76 EKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDN 135 K L I + ++ + K LN +F+F ++ Sbjct: 101 NKKL-DKITTPVIQKLINKKSQEIADFKL----------------INIYLNRLFKFAINQ 143 Query: 136 GYLADNPFKGISPLKESRTIPD----PLSREEFIRLIDACR---NQQAKNLWCVSVYTGV 188 GY NP I + D +EE + + +Q + ++ Y G+ Sbjct: 144 GYTDYNPCLNIIYPTIRKEQKDMSLEYWDKEELKEFLYHAKKDLDQMWYLFFKIATYAGL 203 Query: 189 RPGELCALGWEDIDLKNGTMMIRRNLA-----KDRFTVPKTQAGTNRVIHLIKPAIDALR 243 R GE+ AL W DID KN T+ + ++L+ K T PKT+ + R I + K I L Sbjct: 204 RKGEILALTWNDIDFKNKTLTVNKSLSVTRQSKKAITSPKTK-SSIRTISIDKTTIKELY 262 Query: 244 SQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAA 303 + K I + ++S R+ ++ Sbjct: 263 NWKIEQSKLKLQNI---------------------NQYIFTTKQSELINLNSPRKRFERV 301 Query: 304 IKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQV 363 IK+ LR + + RHT+A AG + +++GH+ ++ +Y Sbjct: 302 IKKHDLRKIRLHSLRHTHASLCFEAGMTIKDVQHRLGHSTSKTTMNIYIHVTKSQEEKNG 361 Query: 364 ALLNTQL 370 + Sbjct: 362 QKFEKFM 368 >UniRef50_A4XMV7 Phage integrase family protein n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMV7_CALS8 Length = 332 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 135/349 (38%), Gaps = 46/349 (13%) Query: 26 RNLEKFGE-ARQDLTIKELAEKFLALKETE-VAKTSLNTYRAVIKNILSIIGEKNLASSI 83 + L+++ + + +T KE + + + V ++ YR ++K L IG K L + + Sbjct: 23 KILKQYSKVSNSSITFKEFVDYWFEAYASTAVKPSTQKRYRQLLKPALRAIGNKPL-NKV 81 Query: 84 NKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPF 143 + + L +S T+ L+ +F+ Y++DNP Sbjct: 82 KPLDIQNIYIALA--------------GTQSNCTILKLHRLLHEIFKHAQMWEYISDNPV 127 Query: 144 KGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDL 203 K + P + + D E R ++ +++ ++++TG+R GE+ +L W D++ Sbjct: 128 KKVVPPTPEKKVFDVWDVETAKRFLEIIKDEPIYYPALIALHTGMRAGEILSLKWCDVNF 187 Query: 204 KNGTMMIRRNLAKDRFTVP---KTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVH 260 + + I ++ K+R KT+ + R +++ L++ +T+ Sbjct: 188 ETRVISIVKSERKNRGLKTVNLKTKT-SKRAVYMNDILYKELKNLYEITKPK-------- 238 Query: 261 FREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHT 320 P+ + + TV+ + + + +K+ + + RHT Sbjct: 239 -----------------PDDFVCPRLPTGNLTVNYLSRKFKKLVKKHNFPLIRFHDLRHT 281 Query: 321 YACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQ 369 +A L+ G N +A +GH+D ++ Y + + Sbjct: 282 FATLMLSLGVNTKIVAEILGHSDIKLTADTYSHVLPTMQEEAMKEFVKL 330 >UniRef50_A5N1D5 Phage integrase-related protein n=2 Tax=Clostridium kluyveri RepID=A5N1D5_CLOK5 Length = 392 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 132/360 (36%), Gaps = 27/360 (7%) Query: 26 RNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINK 85 ++ + + + +KE +++L + + ++ ++ Y +I + +GE + S + Sbjct: 55 KSSNGYNFSGDKILLKEYLKRWLKTEGSSLSPSTQKRYNEFCVHISNHLGEIPI-SKLTG 113 Query: 86 EKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKG 145 ++ E K L + G S T+ L+ V +G + Sbjct: 114 LQIKEFYKNLEQPQVYSNF-----KKGLSRSTILKVHRMLHKALTDAVRDGTIDRTVISN 168 Query: 146 ISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKN 205 I +T F +D + + ++ TG+R E+ L WEDID+ Sbjct: 169 IKYGSVEKTETKVWDNSTFYSFLDKIKEELIYLPVLLAFETGLRQSEITGLKWEDIDINK 228 Query: 206 GTMMIRRNLAKDRFTVP----KTQAGTN-RVIHLIKPAIDALRSQMTLTRLSKEHIIDVH 260 + ++RN D KT+ ++ RVI+L I+ L+ Q RL+K + Sbjct: 229 KLLTVKRNYGYDALKKSLSDKKTKTKSSLRVINLFDNTIENLKKQKQQQRLNKLLYGKAY 288 Query: 261 FREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHT 320 + G+ I + + +K+ + + + RH+ Sbjct: 289 IE----------------SGYICTTSNGNPINPLYISKRFAQLVKKHNFKKIRFHDLRHS 332 Query: 321 YACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHN 380 +A L +P ++ ++GH+ + Y ++ + N ++S++ N Sbjct: 333 HATMLLKENVHPKIVSQRLGHSSIAITLDTYTHVSTDIEKNALLSANEKISQYIEEKESN 392 >UniRef50_C0GET2 Integrase family protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GET2_9FIRM Length = 386 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 68/353 (19%), Positives = 131/353 (37%), Gaps = 32/353 (9%) Query: 26 RNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINK 85 + + T E E +LA K+ + ++ +TY + ++ S++ Sbjct: 56 KVEKGIDINAGKTTFTEWFEIWLASKKNNIKPSTYDTYETFWR--------VHIKSALGH 107 Query: 86 EKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKG 145 KL +++ + K S +V T +N + + ++ NP Sbjct: 108 MKLDKIQPHHVQKLLDEK-----QGGELSPRSVRYIHTTINTALKSALKQRIISFNPADA 162 Query: 146 --ISPLKESR-TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDID 202 + K ++ PL++++ I + + + +S+ G+R GE+ L WE+ID Sbjct: 163 ELLELPKNTKIKEVKPLTQDDVKAFIATAKEDKFSVAYILSLALGMRKGEVLGLQWENID 222 Query: 203 LKNGTMMIRRNLAKDR-----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHII 257 + T+ I+ NL + + T PKT A +NRV+ L + + L + +E Sbjct: 223 FEQKTLTIKNNLTRVKGKGLVLTTPKT-ASSNRVVLLPEKILTLLSEHGRKQAVEREI-- 279 Query: 258 DVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQS 317 + VF E G + + +++AGL + Sbjct: 280 -AKASGKYSEAEGFDNMVFTYEE-------GKPVCPRYFERKFKKVLEKAGLSQAGLHSL 331 Query: 318 RHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 RH+Y AG N I +GH+ A VY + +E ++ L Sbjct: 332 RHSYGTLQNEAGVNMKAIQATLGHSKASFTMSVYTQNTTELQREATQAVDKWL 384 >UniRef50_A5N1F6 Integrase-related protein n=3 Tax=Clostridia RepID=A5N1F6_CLOK5 Length = 416 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 63/376 (16%), Positives = 136/376 (36%), Gaps = 47/376 (12%) Query: 22 FPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLNTYRAVI-KNILSIIGEKNL 79 F + ++ + +T +E +K+L E E+A +L Y+ ++ I+ +G L Sbjct: 54 FKDEIEKGIYLDSGK-ITFEEFIKKWLKDYAEAELAPKTLYRYKELLYTRIIPALGHIKL 112 Query: 80 ASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLA 139 + + + E L G S T+ ++ ++++ + G++ Sbjct: 113 -NKLQPTHITEFYSNLREDGIRNDGKP----GGLSERTILHHHRLISSILATAIQWGFIL 167 Query: 140 DNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQ--AKNLWCVSVYTGVRPGELCALG 197 +NP + K + + EE ++ N+ K + +++Y G+R GEL AL Sbjct: 168 NNPALRLKAPKVEKKEARHFNIEETAYVLQLIENEPIKYKTMITLAIYGGMREGELTALT 227 Query: 198 WEDIDLKNGTMMIRRNLAK--DRFTVPK-TQAGTNRVIHLIKPAIDALRSQMTLTRLSKE 254 W DI+ + T+ I ++L R T K T+ T R+I + + L+ K Sbjct: 228 WSDINFDDCTIKINKSLQHLPGRDTFIKSTKTETTRLISIPISVMTLLKEYKRWQNTEKL 287 Query: 255 HIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAG------ 308 + + ++ + G +I + + I++ Sbjct: 288 KLGN----------------LWHDSDALFTATDGKSIFPSTISKWFLKFIRKHNESIIND 331 Query: 309 ------------LRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 L+ + RHT A + G + ++ ++GHA +Y + Sbjct: 332 DKIPPKDKSKYLLKEVNFHGLRHTSATLLINQGVDITTVSKRLGHARTSTTTDIYSHSLQ 391 Query: 357 ENNNAQVALLNTQLSE 372 + + L + Sbjct: 392 KADVEAADKLENLFNN 407 >UniRef50_D1XEM4 Integrase family protein n=1 Tax=Streptomyces sp. ACTE RepID=D1XEM4_9ACTO Length = 435 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 68/367 (18%), Positives = 132/367 (35%), Gaps = 38/367 (10%) Query: 39 TIKELAEKFLA-LKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELL 96 ++ +L + ++ + + Y + +++ +G+K LA + + +L Sbjct: 78 SVSAYLTYWLEAVAVHQLRENTHTRYTTCVNQHLIPGLGKKKLAKL-TAKDVRTWLNQLR 136 Query: 97 TGYQIPKSNYIVTQ-------------PGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPF 143 T Q + S +T+ + L + + V + N Sbjct: 137 TTCQCSVRAIDAHRDQPRCCAAGTCCSKRLSPLTLAYIHSVLKSALEHAVREEEITRNVA 196 Query: 144 KGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDL 203 + + +PL+ +E + + A RN + L+ +++ G+R GEL L W+D+DL Sbjct: 197 RNVRTGTPRPRRFEPLTADEARQFLAAVRNDRLFALYELALRAGLRKGELLGLQWKDLDL 256 Query: 204 KNGTMMIRRNLAKDRFT----VPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDV 259 NGT IRR L + + +P + R I L I + + + Sbjct: 257 HNGTASIRRTLQRTQTGGLTALPTKTRASERRIALPSECIHSFKEHRAVQE--------- 307 Query: 260 HFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRH 319 R+ + VF+ G ++ + + ++RAGLR + + RH Sbjct: 308 GERKAAAEGWKDNGLVFRTSA-------GGPIDPANLNRSFHTLLERAGLRRIRFHDLRH 360 Query: 320 TYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS--EFAPTM 377 + A L G I +GHA + VY V L++ L+ A Sbjct: 361 STATLLLEQGVELVVIKELLGHAHIGVTATVYAHVRLRLQRQAVETLSSTLAGPTNAEAA 420 Query: 378 PHNEAMK 384 P + Sbjct: 421 PDGSEKQ 427 >UniRef50_A6NXL1 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NXL1_9BACE Length = 397 Score = 267 bits (683), Expect = 6e-70, Method: Composition-based stats. Identities = 69/369 (18%), Positives = 131/369 (35%), Gaps = 32/369 (8%) Query: 17 DYAKQFPSSRN---LEKFGEARQDL------TIKELAEKFLALKETEVAKTSLNTYRAVI 67 Y + P ++N +F + +D+ T+ E ++ ++A +L YR Sbjct: 36 KYFQTVPEAKNWIEEARFADQHEDIFVPTETTVDEWFGFWIENIVGDLAPNTLRNYRERY 95 Query: 68 KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNA 127 + N+ I + + V+ + + T+ + Sbjct: 96 AH--------NIQPVIGRMAISSVKPMHCKKVLLQMDAI------YAGSTIRQAYITMGT 141 Query: 128 VFQFGVDNGYLADNPFKGISPLKESR--TIPDPLSREEFIRLIDACRNQQAKNLWCVSVY 185 +F+ N +A +P G+ K R L+R+E + A + + + + Sbjct: 142 MFKAAKMNDVIAKHPMDGVRYTKPVRAVDDIKFLTRQEQSLFLQAAKKSHNYYQYALILE 201 Query: 186 TGVRPGELCALGWEDIDLKNGTMMIRRNLA------KDRFTVPKTQAGTNRVIHLIKPAI 239 TG+R GEL L W+ +DL+ T+ + + L R PKTQ + R I L A Sbjct: 202 TGLRTGELIGLTWDAVDLEKRTLTVNKTLEFRHGLHTWRAGPPKTQ-HSYRTIPLTDRAC 260 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 + L+S KE + EY + ++ G+ S Sbjct: 261 EILQSVWNSRDTRKESPLLSQTLEYIDRRTGSIAKLVMRDLVFINWRTGEPAKNSSYDTH 320 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 AG++ + RHTYA ++ +G P + +GHA + Y +++ Sbjct: 321 LYKICDEAGIKRFCMHALRHTYATRAIESGIQPKVLQKLLGHASIKTTMDWYVHVTTDSL 380 Query: 360 NAQVALLNT 368 + V Sbjct: 381 DQAVRQFEK 389 >UniRef50_D1BL69 Integrase family protein n=1 Tax=Veillonella parvula DSM 2008 RepID=D1BL69_VEIPT Length = 403 Score = 267 bits (682), Expect = 7e-70, Method: Composition-based stats. Identities = 74/388 (19%), Positives = 149/388 (38%), Gaps = 43/388 (11%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFL-ALKETEVAKTSLN 61 +R + K V+ KQ+ + + ++ +K++ +L +K+ V + Sbjct: 36 IRRAFSGNSKLEVYKLGKQWIEATQQNTSIFSSKNTKLKDICNYWLQDVKKVSVKPKTFQ 95 Query: 62 TYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 Y + ++ IL ++GE +AS I +++ V G K +I+ S+ T+ Sbjct: 96 KYDSTLRLYILPLLGEIKIAS-ITPQQVQTVLNNWSNGTLKGKKGHII-----SSSTIRC 149 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQ------ 174 L+ +F++ V+ G L NP K + T LS +E +L + Q Sbjct: 150 TRRYLSELFEYAVNIGLLLKNPIKLTKAPRLITTEIHTLSLDEIHQLTSTMKQQVSNNIS 209 Query: 175 --------QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD----RFTVP 222 + +++ TG+R GE+ L W+ +DL +G + +RR + F Sbjct: 210 SPYRINYYSSYIATKIALGTGMRLGEVFGLCWDCVDLIHGHISVRRTIQTGTKGQIFQDT 269 Query: 223 KTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSA 282 KT+ + R I + + L + + + D YG Sbjct: 270 KTKT-SRRCIPISQELQSELTTYKEFQSNYAKELGDKWTDSYGV---------------V 313 Query: 283 RVKNYGDHFTVDSIR-QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGH 341 +G + + + + + +K+ L H + RHT+A L+ NP + ++GH Sbjct: 314 ISGTFGKILSTSNFKSRYFIPILKQLNLDHITFHDLRHTHATLLLSQKINPKIVQERLGH 373 Query: 342 ADAQMVFQVYGKWMSENNNAQVALLNTQ 369 + + Y + + V L+ Sbjct: 374 STITLTLDTYSHLVPDIQKEAVKALDNL 401 >UniRef50_A9KZM7 Integrase family protein n=4 Tax=Gammaproteobacteria RepID=A9KZM7_SHEB9 Length = 431 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 105/383 (27%), Positives = 174/383 (45%), Gaps = 24/383 (6%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKF-GEARQDLTIKELAEKFLALKETEVAKTSLNT 62 R+++ I FDY FP S +F G + + +L +++ AK++ Sbjct: 55 RNTILTEIAENRFDYIAHFPESIKAMEFAGILIERRNVANGVNHWLKIQDVTKAKSTSKN 114 Query: 63 YRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 YR+ K++++ G L S I++ LL + +L + G S TVN+ Sbjct: 115 YRSKSKHVINYFGGDQLISEISRSHLLMFQANML-------------KAGLSPKTVNDVF 161 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKES--RTIPDPLSREEFIRLI-DACRNQQAKNL 179 T + V+ ++G + NP IS ++ DP +R+E R+ D + N+ Sbjct: 162 TIVRGVWYVAFEDGIIRSNPLDRISNIERDTLEETADPFTRDELERIAADDTSRRGDINM 221 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAI 239 +TG+ E+ AL WEDID N T+ IRR ++ VPK + G RVI LI PA Sbjct: 222 IMFCCWTGLSLSEVIALAWEDIDTVNWTVNIRRARVLTQYKVPK-ERGRVRVIELIDPAK 280 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 + L QM T + ++V R+ T+ + FVF S G + S+R+ Sbjct: 281 EWLIEQMQHTMMLPTIELEVKQRDNITTKNENIRFVFLNGKS------GLPWYDHSVRRW 334 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 + ++R LRHR Q RHT+A L+ ++A Q+GH+D M+ + YGKW+ +++ Sbjct: 335 FTGILERTKLRHRGPNQCRHTFASQLLSNYVPLEWVARQLGHSDTTMIKKHYGKWIPKDS 394 Query: 360 NAQVALLNTQLSEFAPTMPHNEA 382 ++ L T Sbjct: 395 QKMANRVSEMLGFTKDTEGEQNG 417 >UniRef50_A7B6B9 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7B6B9_RUMGN Length = 387 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 132/357 (36%), Gaps = 40/357 (11%) Query: 37 DLTIKELAEKFLA-LKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 ++T+ + +L K+ + +++ Y + + I K+++ + + Sbjct: 50 NITLDTWFDIWLNTHKKRTIKESTQVRYDDFYRRY--------IKKQIGKQRVADFNPII 101 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 L + S T+ + LNA+F++ V N L NP G+ K Sbjct: 102 LERLLQNMA-----DDDYSTKTIRDVYNILNAMFKYAVHNRILTFNPCAGVEVPKTKTKQ 156 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 L+ +E +++ + + +NL V++ TG+R GEL L W+D+D + + + + L Sbjct: 157 IRVLTVKEQREVLEHAKERIHENLIQVALGTGMRGGELLGLTWDDVDFRKREISVNKTLV 216 Query: 216 KD----------RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 ++ PKT+ + R I + AL+ Q + + + E Sbjct: 217 YIKDKETKKYVFKYQTPKTKN-SIRTIPMQDSVYKALKRQWIQLKEMQLSASEWQPLE-- 273 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKR---------AGLRHRKSYQ 316 VF + + + T+D I + + K+ + H + Sbjct: 274 ----GFENLVFVGKNGKPITEHTFQVTLDWIEKSINKERKKQAEKNKTVFIPIPHFYPHA 329 Query: 317 SRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEF 373 RHT+A AG + + +GH + +Y + +++ L E Sbjct: 330 LRHTFATRCFEAGIDAKVVQGFLGHYSIAITLDLYTHVTDDKAKSEMDKLQNLYKEI 386 >UniRef50_A1SI41 Phage integrase family protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SI41_NOCSJ Length = 403 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 122/358 (34%), Gaps = 48/358 (13%) Query: 34 ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 A QD+T+ E ++++ E + ++ TYR I+ L + +L + Sbjct: 62 APQDITVAEWLDRWMDGHEVTLKPSTAKTYRDKIR--------LYLKPKLGSARLQSLSP 113 Query: 94 ELLTG-YQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 LT ++ +++ + S TV L+A Q V + NP G K Sbjct: 114 SGLTVVWRDLQASGGRSGAPLSRRTVEFARAVLHAAMQDAVVERIIQVNPVDGSKMAKRD 173 Query: 153 -RTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWED-----IDLKNG 206 + + + + A + + +W V TG+R GE+ L W D +DL G Sbjct: 174 GKPKHTTWTAAQVASFLTATTSDRWHPMWAVFASTGMRRGEVAGLRWSDSHGPIVDLDGG 233 Query: 207 TMMIRRNLAK--DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY 264 T+ + + + +R + R I + + LR+ + + Sbjct: 234 TIRVEVSTTQLDNRRVTTTPKNHERRTIAIDPDLVTVLRTWKATQAAERLAFGPGYADAE 293 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAG---------------- 308 G G D I + + A + Sbjct: 294 GI---------------VFTWEDGRPVMPDYISKTFLTAQTKLKELAAGPGDDAPATIVP 338 Query: 309 LRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALL 366 L + RHT+A L +G +A ++GH D + Y + +++++ V + Sbjct: 339 LPRLVLHGLRHTHATILLRSGVPVHVVARRLGHKDPSVTLDTYADVIPDDDSSAVDVF 396 >UniRef50_C9XJT1 Integrase n=6 Tax=Clostridium difficile RepID=C9XJT1_CLODC Length = 380 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 56/371 (15%), Positives = 132/371 (35%), Gaps = 46/371 (12%) Query: 12 KTGVFDYAKQFPSSRNLEKFGEA--------RQDLTIKELAEKFLALKETEVAKTSLNTY 63 G FD + +S+ L + E+ ++T+ E FL ++ + N Y Sbjct: 40 NMGTFDKKR--EASKRLNEVKESLYNDGFLVPSEITVSEFLLDFLNKYSENISLATYNNY 97 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 ++ KN + SI K K+ ++ + Y S + ++ ++ Sbjct: 98 VSICKNY--------INPSIGKYKIQDLHPVHIQNYIDKLSY------KLNPQSIKIHIN 143 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVS 183 L + + +N I + + + RE+ I+L+D +N + + ++ Sbjct: 144 ILKLAIKRAYRLKLIKENVMDSIEAPRYKKFKNEIYDREQMIKLLDLAKNTEMELPINLA 203 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHLIKPAI 239 + G+R E+ L W++ID + T+ + + ++ PKT+ + R I K + Sbjct: 204 IGLGLRISEVLGLTWDNIDFEENTITVNKITSRINGSVILKEPKTE-SSVRKISSPKELM 262 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 L+ + + + D + + Sbjct: 263 SLLKEYKIKQNKNLLKSS-----------------IRNNNNLLFFNKKCEPIAEDVMSKK 305 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 + +++ L H + + RH++ + + I+ ++GH++ VY + E + Sbjct: 306 FKRFLEKNELPHIRFHDLRHSHVTLLINSKVPIKVISERVGHSNISTTLSVYSHVLKEMD 365 Query: 360 NAQVALLNTQL 370 ++ L Sbjct: 366 KEASDKISESL 376 >UniRef50_A5WDD8 Phage integrase family protein n=6 Tax=Proteobacteria RepID=A5WDD8_PSYWF Length = 401 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 94/383 (24%), Positives = 157/383 (40%), Gaps = 46/383 (12%) Query: 8 CYAIKTGVFDYAKQFPSSRNLEKFGEARQD--------LTIKELAEKFLALKETEVAKTS 59 I G F+YA+ FP S K + K+ AE + + KE E T Sbjct: 46 EAEIVLGTFNYAQYFPKSDKASKMMALNDRKECINTSMPSFKQFAELWFSEKEIEWRDTY 105 Query: 60 LNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 R +I +L + + +I K ++L R L K + SA + Sbjct: 106 KRKIREIIDMYLLPEFQGRPI-DTIKKTEVLAFRSALA------KVTRGKVKKPLSAARI 158 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKN 178 N+ M L + + Y +NP++ I LKE RT P + +E + I+ R +N Sbjct: 159 NSIMVPLGMILKEASK-RYKFENPYEDIKSLKEPRTSIQPFTLDEVWKFINWVRED-YRN 216 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPA 238 + V +TG+R E+ L WE+ID ++I + L K + PKTQ + R I + Sbjct: 217 YYLVRFFTGMRTSEIDGLTWENIDFDRREIVINQALVKGKIVPPKTQE-SYRAIQMSPWV 275 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 DAL+ Q +T ++ + G+ +++ + Sbjct: 276 YDALKEQHKVT--------------------------YKRSEYVFCSHTGEPLDYNNVNK 309 Query: 299 M-WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 W +K GL+ R +YQ+RHT A L AG +P +IA QMGH+ +M+F Y +++ Sbjct: 310 RVWHPTLKALGLKKRNAYQTRHTAATLWLAAGESPEWIAYQMGHSTTKMLFNTYSRYVPN 369 Query: 358 NNNAQVALLNTQLSEFAPTMPHN 380 + ++ + N Sbjct: 370 MTRQDGSAFEALVNRSQLQIEKN 392 >UniRef50_C2Z776 Prophage LambdaBa04, site-specific recombinase, phage integrase n=10 Tax=Bacillus cereus group RepID=C2Z776_BACCE Length = 379 Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 69/373 (18%), Positives = 136/373 (36%), Gaps = 49/373 (13%) Query: 22 FPSSRNLEK-----FGEARQDLTIKE----LAEKFLALK---ETEVAKTSLNTYRAVIK- 68 F + + + E + + + + + + LK + E+ TS +++K Sbjct: 35 FRTKKEAQNAAANMITEIEKGMYFDDKQLSVLDIWGKLKPIRKAELKITSYEKDMSLVKL 94 Query: 69 NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAV 128 IL G K + S I + EL + G S T++N + Sbjct: 95 YILPTFGYKKIKS-IKPVIIQSYYAEL-------------KEKGLSNGTISNIHRCFRCI 140 Query: 129 FQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACR--NQQAKNLWCVSVYT 186 F+ V+ L DN + +E + S +E R + + N++ + +++YT Sbjct: 141 FKHAVEWEILHDNIMNKVKKPREEQGEMKTWSSKECNRFLHYLKEKNKKYYIFFLLAIYT 200 Query: 187 GVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTV----PKTQAGTNRVIHLIKPAIDAL 242 G+R GEL AL W+DID N +++ ++L K + KT++ + + + L Sbjct: 201 GMRRGELLALTWKDIDFDNKRILVNKSLVKTEEGLFKAATKTKSSNRSI-SISSFVVTEL 259 Query: 243 RSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDA 302 +S + E ++F +D+ + Sbjct: 260 QSYYAYKKKEFFRWGIHLNEEA---------YIFAG------NTIHSPLHIDAPHRFLKD 304 Query: 303 AIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQ 362 K+AG+ + + RHT+A L AG +P + +++GH+ QM Y Sbjct: 305 HYKKAGVPRIRIHDLRHTHATLMLQAGEHPKIVQDRLGHSSIQMTLDKYSHITQNMQQQA 364 Query: 363 VALLNTQLSEFAP 375 + + Sbjct: 365 AENFENVIKPYEK 377 >UniRef50_A4XLL4 Phage integrase family protein n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XLL4_CALS8 Length = 360 Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 60/384 (15%), Positives = 131/384 (34%), Gaps = 48/384 (12%) Query: 1 GELRSSVCYAIKTGVFD--YAKQFPSSRNLEKF-----GEARQDLTIKELAEKFLALKET 53 G+ + + Y I K F +K+ + + + E +++L Sbjct: 12 GKFQVVLEYGIDGNGKRIRKYKTFDKESEAKKYLIQMLANEGKFIPLNEFLDRWLEEYAK 71 Query: 54 E-VAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPG 112 VA + Y+ +K++ L +N +L + +L Sbjct: 72 NYVAPKTYIKYKDSLKHVRKAFPSHTL-QQLNTFELQKFFNQLSQT-------------- 116 Query: 113 RSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPL-KESRTIPDPLSREEFIRLIDAC 171 S +V + LN + + L +NP + + K E + ++ Sbjct: 117 LSQASVRKIYSVLNNALKTAIKWNMLKENPLEFVKLPQKYEEKKIKVWDIETVKKFLEDI 176 Query: 172 RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAG 227 ++++ ++++ G+R GE+C L W+++D + + I++ L K PK++ Sbjct: 177 KDEKIHTAVTLALHAGLRAGEICGLTWDNVDFEKKCIHIKQALQKIGKEIIIKPPKSKT- 235 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 + R I++ + L + +E + + Sbjct: 236 SIRTIYMTSYLYETLLEEYKRQEPLREAYKKLG-------------------NFVCIHET 276 Query: 288 GDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMV 347 G+ F D + + G + + RHT+A L A NP A +GH++ ++ Sbjct: 277 GNPFCPDYFTHTFKKLVSCLGYPEIRFHDLRHTFATILLQAQTNPKIAAEILGHSNTKLF 336 Query: 348 FQVYGKWMSENNNAQVALLNTQLS 371 +Y + E + L Sbjct: 337 LNLYAHVLDEQKIKATHKIEEILG 360 >UniRef50_UPI000169495E prophage LambdaBa04, site-specific recombinase, phage integrase family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169495E Length = 379 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 121/358 (33%), Gaps = 51/358 (14%) Query: 24 SSRNLEKFGEARQDLTIKELAEKFLAL-KETEVAKTSLNTYRAVIK-NILSIIGEKNLAS 81 S L LT+ E F+ + EVA + +K +I IG L Sbjct: 61 QSELLNGTYVEPTKLTVGEFLLDFVENTLKYEVAPNTYEQRMTFVKNHIQPNIGSLRLTD 120 Query: 82 SINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADN 141 + + + L + A V N L+ F V ++ N Sbjct: 121 -LTPNHVQKFYNSL--------------REHYGAGYVQNIGNLLSKAFTQAVKWNMISRN 165 Query: 142 PFKGISPLK--ESRTIPDPLSREEFIRLIDACRNQQ--AKNLWCVSVYTGVRPGELCALG 197 P + T + E+ + +D ++ ++ +++ +G+R GEL L Sbjct: 166 PIPLVKKPSLSRKNTKMKTWTVEDQRKFLDYAKDGPKLYYVIFLLALTSGMRKGELLGLI 225 Query: 198 WEDIDLKNGTMMIRRNLAKDRFTV-----PKTQAGTNRVIHLIKPAIDALRSQMTLTRLS 252 W+D+D K G + I+R + + + PKT++ R I L +P I ++ Sbjct: 226 WDDVDTKKGIVSIKRTIVYAQRKLYLKDMPKTESAI-RTIQLPEPTIKVMKQWKLE---- 280 Query: 253 KEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHR 312 + +F + + +S+ + IK AG+ Sbjct: 281 --------------CPANELNLLFPSPKTKGI------LYPNSLDKQLAKTIKGAGVPEI 320 Query: 313 KSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + RHT+A L + NP + +GHA + Y + + L L Sbjct: 321 TMHGLRHTFATTLLGSNVNPKIVQEMLGHATIKTTMDTYSHVLPNMQKDAASQLGAVL 378 >UniRef50_Q03GP3 Integrase n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03GP3_PEDPA Length = 384 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 61/359 (16%), Positives = 137/359 (38%), Gaps = 48/359 (13%) Query: 28 LEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKE 86 ++ + + +++ +++ V +++L + +I ++L G+ + ++I Sbjct: 57 EKRGLQEDERRFFRDVCAEWMEQYRLTVRESTLEKTQRIINIHVLPAFGDMVI-NNITPN 115 Query: 87 KLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGI 146 +V + A + ++ + +F + + Y+ NP + Sbjct: 116 VCQKVVNKWF----------------LEAKSYKKWLNYASMIFDYALRAEYVGRNPCTLV 159 Query: 147 SPLKESR----TIPDPLSREEFIRLIDACRNQQA---KNLWCVSVYTGVRPGELCALGWE 199 + + + + +R+E D ++ ++ V Y+G+R GEL AL W+ Sbjct: 160 TMPRVQEQAGEKLENFWTRDELNTFFDYVTPERDVEQFTMFRVLAYSGIRKGELLALTWK 219 Query: 200 DIDLKNGTMMIRRNLAKD-----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKE 254 DI+ ++ T+ + + L + PK++AG R I L + LR + R + Sbjct: 220 DINFEDNTLRVNKTLTQGLGGKLIVQPPKSRAG-RRTIDLDDSTMRYLRQWKGVQRET-- 276 Query: 255 HIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKS 314 F G VF + ++++ + + AIK GL+H Sbjct: 277 ------FLGMGFNTNNVDQLVFASNRNHFR-------SMNTPTKWLNKAIKATGLKHISI 323 Query: 315 YQSRHTYACWSLTAGANPAFIANQMGHA--DAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + RHT+A +G ++GH+ D+ + VY + N A + + Sbjct: 324 HGFRHTHASLLYQSGVGLKETQQRLGHSRADSSVTLDVYTHTTEQQNVAALQRFENYVE 382 >UniRef50_C0EE56 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE56_9CLOT Length = 348 Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 124/342 (36%), Gaps = 29/342 (8%) Query: 37 DLTIKELAEKFLALK-ETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 ++ + A+++ E ++ + ++ YR + + +G ++ I + + L Sbjct: 15 NIKFEVFAKQWFKEYAEVKLRERTIARYRQLEARTYAALGHLHM-DKITVRHVQKFIHNL 73 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 + T + T+++Y++ ++ +F + + + +NP + + K + Sbjct: 74 -----GEEGINQTTGGRLAPKTIHHYLSFVSTIFSYAIKMQMVKNNPCEHVQLPKAEQKE 128 Query: 156 PDPLSREEFIRLIDACRNQQ--AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR- 212 D + EE ++ + + + + +++Y G R GEL L W+DID G + IRR Sbjct: 129 LDCYTLEEAQEFLNLLQKEPLKYQAFFTLAIYGGFRKGELLGLEWKDIDFSTGVISIRRS 188 Query: 213 ---NLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 K FT + R + + + L+ + + + D Sbjct: 189 SLYTKGKGTFTDTTKTKSSQRSLKIADEVLQVLKRYQSQQIFDRARVGDQ---------- 238 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG 329 + K G+ +S +R G R +Q RH A + Sbjct: 239 ------WVDTDRLFTKWNGEPMHPNSPYTWLKRFCERTGQRFLGVHQFRHLNATLLINNR 292 Query: 330 ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + I+ +GH +Y E+ +++ LS Sbjct: 293 VDAKTISASLGHTQVSTPLNIYAHTFQESQAKASEVISNALS 334 >UniRef50_A3JCU8 Phage integrase n=2 Tax=Marinobacter sp. ELB17 RepID=A3JCU8_9ALTE Length = 408 Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 88/397 (22%), Positives = 158/397 (39%), Gaps = 53/397 (13%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKF-----------------GEARQDLTIKELAE 45 L V I G F+YA+QFP SRNL K A Q + + A+ Sbjct: 43 LLQKVEAKILLGAFNYAEQFPDSRNLNKLKNDGSGAGINDEGADPEVNAAQTPYVADFAD 102 Query: 46 KFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSN 105 ++ + + + +++ + L + + I K +L R ++ K Sbjct: 103 QWFQESKIQWRSSHTRNVVSILDSSLKPAFKNTRMAEITKADILAARTKMA------KRR 156 Query: 106 YIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFI 165 + T+N+++T L + + DNP++ I PLK R +P S E Sbjct: 157 GRGASGLMAPKTINSHLTILRMIMTEA-SERFEFDNPYRNIKPLKLQRVHIEPFSLAEVE 215 Query: 166 RLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQ 225 R+ R +N + + YTG+R GE+ L W ++D + +++R L + KT Sbjct: 216 RICKYVRED-YRNYYQLRFYTGMRTGEIDGLKWANVDFEKQEILVRETLIHGKTEYTKTD 274 Query: 226 AGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVK 285 G+ R I + P +AL++Q + FVF Sbjct: 275 -GSQREIPMFGPVYEALKAQHAAIGKLSK-------------------FVFCNRE----- 309 Query: 286 NYGDHFTVDSIRQM-WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADA 344 G +++ + W ++ L R+ YQ+RHT A L +G NP ++A +GH+ Sbjct: 310 --GQPLDHNNVTKRVWYPLLEALKLTKRRPYQTRHTAATLLLASGENPEWVARVLGHSST 367 Query: 345 QMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNE 381 +M+F+VY +++ + L + +E Sbjct: 368 EMLFKVYSRFIPNLTRMDGSAFERLLGSRVDSRKESE 404 >UniRef50_A1HTM7 Phage integrase family protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTM7_9FIRM Length = 393 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 76/381 (19%), Positives = 139/381 (36%), Gaps = 40/381 (10%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLN 61 +R V K + + +A + +T+ + K+L + VA ++ + Sbjct: 36 VRKVVYARTKAEAKQKRDALAAQYEAAYYVDADK-ITVGDWLAKWLDVYARPAVAPSTYD 94 Query: 62 TYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 Y + + +++ IG L S + + + ++ L+ G+SA TV Sbjct: 95 WYERICRVHLIPAIGHLRL-SRLQQMAVQQLLNSLVDA-------------GKSARTVQA 140 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRN-QQAKNL 179 + L + +G L P ++ + + PL+ +E+ L+ A + Sbjct: 141 VHSVLAMALRVARKHGLLRTLPTDDVAVPQVRKQDKRPLTPDEWDALLTAAQTAPDIFAA 200 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHLI 235 V TG+R GEL L W+DID + +RR + R PKT+A T RV+ + Sbjct: 201 LVVEWATGLRRGELLGLMWDDIDFDRCLINVRRAVQIRRGGCVLADPKTEA-TKRVLPVP 259 Query: 236 KPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDS 295 K + LR+ + R Q C VF G + + Sbjct: 260 KEVMQVLRAHRARQ---------MQCRLAAGPAWQDCGLVFPTSG-------GTLYDPRN 303 Query: 296 IRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 + + K AGL + RH + AGA ++GHA +M+ VY + Sbjct: 304 WSKRFARIAKAAGL-DIGVHHLRHDLTSRIVAAGAPVKEAQYRLGHATVKMLLDVYAHRV 362 Query: 356 SENNNAQVALLNTQLSEFAPT 376 + +A + + Sbjct: 363 TGGQDAITETIRASAPQTLKN 383 >UniRef50_Q98MQ9 Bacteriophage integrase n=5 Tax=Rhizobiales RepID=Q98MQ9_RHILO Length = 399 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 119/345 (34%), Gaps = 27/345 (7%) Query: 35 RQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKE 94 T+ E ++LA + VA + Y + + LS + + S + +++ Sbjct: 62 PTKQTVAEFLNEWLAFVKPSVAPKTHERYTEICRKGLSPLIGNVILSKLKTDRIDAAFTT 121 Query: 95 LLTGYQIPKSNYIVTQPGR---SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE 151 LT ++ + + TV++Y L V L+ NP +P K Sbjct: 122 ALTAPRVDHRTKKDQREPLPPLAPRTVHHYRRVLVKALGQAVTWERLSRNPATATTPPKV 181 Query: 152 SRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDL--KNGTMM 209 R + L++ R + ++V G+R GE+ AL W ++L M Sbjct: 182 ERQKMLAYDVGQTATLLETLRPTRMFVPVLLAVTCGLRRGEILALRWRHLELGDNRRQMS 241 Query: 210 IR----RNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 I + R+ PK +G R + L + L++ + + + Sbjct: 242 IEESAEQTADGVRYKEPK--SGRARTVALSASTVAELKAHRARQAEEQLRLGIRPDAD-- 297 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWS 325 + G S+ W + + L + + RHT+A Sbjct: 298 --------------SFVVAQVDGQPLQPRSLTHEWVRVLGKTSLPRIRFHDLRHTHATQM 343 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 L+AG +P + ++GH++ + +Y M ++ L Sbjct: 344 LSAGVHPKIASERLGHSNIGITLDLYSHVMPGMQADAAEQVDVAL 388 >UniRef50_Q2JGT4 Phage integrase n=4 Tax=Frankia RepID=Q2JGT4_FRASC Length = 431 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 76/389 (19%), Positives = 140/389 (35%), Gaps = 40/389 (10%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFL-ALKETEVAKTSLNT 62 R V V + + +++ + T++ +L + ++ Sbjct: 62 RRPVYGKTADIVREKLTKM-QAQSDQGIPAEATGWTMERFLTYWLSDIVTPACKPRTVQG 120 Query: 63 YRAVIKNI-LSIIGEKNLASSINKEKLLEVRKE---------LLTGYQIPKSNYIVTQPG 112 Y +++N + IG+K L + +N + + K T + P G Sbjct: 121 YEVIVRNYLIPAIGKKRL-NKLNGVDVRNLLKRVRGTCLCCLHGTDRRRPVKQRRCCAVG 179 Query: 113 R------SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIR 166 R SA V + L V V + N K + + LS ++ Sbjct: 180 RCCHQAPSARLVQQVHSVLRNVLGAAVREELVGRNVAKLAKVSGPTYKVHRGLSADQASH 239 Query: 167 LIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD----RFTVP 222 L+ A + + L+ +++Y G+R GE+ L WEDID ++ T+ +R +L + R P Sbjct: 240 LLKAAAHDRLYALYVLALYLGLRRGEILGLRWEDIDFEDETLAVRHSLQRVGGHLRVVAP 299 Query: 223 KTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSA 282 KT+ + R + L+ LR RE ++ FVF Sbjct: 300 KTRT-SERTLPLLPLIAKVLREHQARQDAE---------RETADVNWRETGFVFT----- 344 Query: 283 RVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHA 342 G D++R+ W GL + + RHT L AG P + GH+ Sbjct: 345 --TAIGTPIEPDNLRRSWLPLCGVLGLEGVRFHDIRHTCVTLLLNAGVPPHVVREIAGHS 402 Query: 343 DAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + ++Y ++ A + L +L+ Sbjct: 403 AIDVTMEIYAHASLDDKRAALQKLVDELA 431 >UniRef50_C5UVC6 Site-specific recombinase, phage integrase family n=2 Tax=Clostridium RepID=C5UVC6_CLOBO Length = 385 Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats. Identities = 73/385 (18%), Positives = 141/385 (36%), Gaps = 39/385 (10%) Query: 1 GELRSSVC--YAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKT 58 G+ R + + K +A Q +N DL K K+ + T + + Sbjct: 24 GKRRRVIKQGFRTKKLAEAFATQILDKKNHGFVSPTDSDLLFKNFIMKWYDMHTTSLKLS 83 Query: 59 --SLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSA 115 + N Y + I N++ ++G + I+ + + L+ + Sbjct: 84 VNTRNDYLSRINTNLIPLLGNYKI-KDISIDVVQNFYNTLIN------------EKHLKP 130 Query: 116 VTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQ 175 TV Y+ L++ ++ + P I +K + + ++EE ++ +N Sbjct: 131 TTVKKYLDILSSCLKYAQSKDLIYKLPTSYIKKVKIQKPKIEYWNQEEVNFFLNYIKNTY 190 Query: 176 AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR-----FTVPKTQAGTNR 230 + + TG+R GELC L W D+DL+NG + + L D+ + ++R Sbjct: 191 LYTPIFIDILTGLRIGELCGLRWCDVDLQNGIITVNHQLIHDKRLKVLLLADLKTSSSHR 250 Query: 231 VIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDH 290 I + K ID L+ + + EY ++Q ++ + K + Sbjct: 251 SITIPKILIDYLKELKANRQATN--------TEYVVLDRQDFKYIPRSLSMNFTKKVAKY 302 Query: 291 FTVDSIRQMWDAAIKR-----AGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQ 345 SI + A + L+ + RHT+A + G N ++ ++GH D + Sbjct: 303 --KKSIDD-FKKANEEVPHGYMQLKQISFHGLRHTHATLLIANGENVKVVSERLGHTDIR 359 Query: 346 MVFQVYGKWMSENNNAQVALLNTQL 370 M Y + N LLN Sbjct: 360 MTLNTYTHVLDSMKNNTANLLNNIF 384 >UniRef50_C9AZK9 Phage integrase n=6 Tax=Enterococcus RepID=C9AZK9_ENTCA Length = 410 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 125/352 (35%), Gaps = 46/352 (13%) Query: 35 RQDLTIKELAEKFLALKETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRK 93 + ++A ++ + V +++ R + K+IL + GE+ + S I+ + Sbjct: 62 ESNRLFSDIALEWFEQYKNTVKESTYVVQRVALNKHILPLFGERRI-SKISIPYCQKQVN 120 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 + Y S N + N++FQ+ + NP +G+ K + Sbjct: 121 HWYSYY-----------KKYS-----NLIGMTNSIFQYAKSLRLIRRNPMEGVIRPKRQK 164 Query: 154 TIPD------PLSREEFIRLIDACRN--QQAKNLWCVSVYTGVRPGELCALGWEDIDLKN 205 I + ++ E + + + ++ + +TG+R GEL AL W+DID K Sbjct: 165 QIDEEKYTAPFYTKAEVLYFLQIAKKYPDPLYPMFHILTFTGLRKGELLALRWKDIDFKR 224 Query: 206 GTMMIRRNLA-----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVH 260 GT+ +++ L K F PKT+ + R I + + R + + Sbjct: 225 GTLSVKQTLTTVEDWKLAFQTPKTEK-SLRTISIDNQTLSIFRQCILKQKAFFLKTGRKP 283 Query: 261 FREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHT 320 V + +D + +K L+H + RHT Sbjct: 284 --------------VENGAQLLFTTEENKPYYLDFLNHNLTKILKENKLKHMTVHGFRHT 329 Query: 321 YACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 + +GA+ + ++GH D + +Y + +++ Sbjct: 330 HCSLLFESGASIKEVQVRLGHTDVRTTMDIYAHVSEQKKEETADRFADYMNK 381 >UniRef50_Q82ZU2 Site-specific recombinase, phage integrase family n=2 Tax=Enterococcus faecalis RepID=Q82ZU2_ENTFA Length = 381 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 69/386 (17%), Positives = 133/386 (34%), Gaps = 56/386 (14%) Query: 10 AIKTGVFDYAKQFPSSRNL-------------EKFGEARQDLTIKELAEKFLALKETEVA 56 V+ + F + + LT K+L EK+LA + + Sbjct: 27 KTGKNVYRKRQGFKTKKQAQIALAEILKDIEENGLDNKPSVLTFKQLYEKWLAQQRLTIK 86 Query: 57 KTSLN-TYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSA 115 +S+ R K+IL +G+ L I + ++ + S Sbjct: 87 PSSIAVNKRFAEKHILPYLGDCKL-DEITVIQCQDLVNKWFNQGHKQYSF---------- 135 Query: 116 VTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK--ESRTIPDPLSREEFIRLIDACRN 173 Y + ++G + NP + K E T + +++E D + Sbjct: 136 -----YRKLTAQIMRYGESMELMNTNPMRKTILPKWKEEETKLEYYTKQELNHFFDCLKQ 190 Query: 174 QQAK---NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRF-----TVPKTQ 225 + + +TG R E+ AL W+D+D+ N ++ I + +A+D F PKT Sbjct: 191 YGNFKQLAFFRLLAFTGCRKSEVLALQWKDLDITNKSVYIGKTVAQDEFYNILTQTPKT- 249 Query: 226 AGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVK 285 A + R I L + + T+ R + + G + ++F Sbjct: 250 ASSTRSISLDNETLQIMAKWRTIQRSD--------YFQMGFNTSSEEQYIFTN------- 294 Query: 286 NYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQ 345 N+ + + + + IK+ L + RHT+A L +G +A ++GH Sbjct: 295 NHNKLLSPNVVNIWLNCLIKKYDLPSITPHHFRHTHASLLLQSGVPIKEVAERLGHTSTA 354 Query: 346 MVFQVYGKWMSENNNAQVALLNTQLS 371 + ++Y M E + Sbjct: 355 ITDRIYSHVMPEEKEKTADKFAQFVG 380 >UniRef50_C5T6H4 Integrase family protein n=2 Tax=Burkholderiales RepID=C5T6H4_ACIDE Length = 501 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 81/403 (20%), Positives = 148/403 (36%), Gaps = 68/403 (16%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEA--------------------------- 34 ++ + + I G F YA FP+S+ L + +A Sbjct: 42 KVLAKIEAEIAAGTFVYANYFPNSKALARLEKAAGQAVQIAVAPVGVEAQHTAGPLKVEA 101 Query: 35 -RQDLT--IKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLE 90 T A +++ + E ++ L + + + ++ EK + S I K +L Sbjct: 102 EPASPTPPFSTFALQWVEEHKIEWRRSHLRSLMSTLNGRLIPHFKEKAV-SQITKSDILT 160 Query: 91 VRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK 150 R L K + G S +N + L + + + +P G+ L+ Sbjct: 161 FRATLA------KVKGRGDKEGLSPKRINEIIGTLGQIMDEAA-DRFEFTSPMTGVKRLR 213 Query: 151 ESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 +T DP S + ++ R ++ + +TG+R GE+ L W +D + +++ Sbjct: 214 VRKTDVDPFSLADVQSILTTVRAD-YRDYFTTRFFTGMRTGEVHGLKWRYVDFERRLILV 272 Query: 211 RRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQ 270 R KT G+ R I + +P DAL Q T Sbjct: 273 RETFVLGEDEYTKTD-GSQRDIQMSQPVFDALLRQREATGKL------------------ 313 Query: 271 KCTFVFQPEVSARVKNYGDHFTVDSIR-QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG 329 +VF G + ++W ++ GL R+ YQ RHT A L +G Sbjct: 314 -SDYVFCNMA-------GQPLDNKNFSDRVWYPLLRHLGLTERRPYQMRHTAATLWLASG 365 Query: 330 ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 P +IA Q+GH +M+F+VY +++ + + L+ Sbjct: 366 EAPEWIARQLGHTSTEMLFRVYSRYVPNLTRQDGSAMERLLAS 408 >UniRef50_Q8R890 Tyrosine recombinase xerC-like n=5 Tax=Clostridia RepID=XERCL_THETN Length = 391 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 76/355 (21%), Positives = 139/355 (39%), Gaps = 46/355 (12%) Query: 36 QDLTIKELAEKFL-ALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKE 94 QD+T+ +L +L + + Y +N I +L ++ Sbjct: 62 QDVTLGDLMHTWLFEVVRMSRKPATFVKYEGHYRNY------------IKNSELYGMKIS 109 Query: 95 LLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS------P 148 ++ QI + + Q G+S+ T+ L F + VD GYLA NP G P Sbjct: 110 IIKSIQIQRYYNKLYQQGKSSKTIKALNNFLKTFFNYAVDEGYLAKNPCTGKKIVIPGTP 169 Query: 149 LKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTM 208 ++ T + S EE ++ +A + + K L+ ++ TG+R GEL L W DID + + Sbjct: 170 EEKIETEIETFSDEEIKKIKEALKGHRLKALFLLAFGTGLRQGELLGLKWTDIDFEKKEL 229 Query: 209 MIRRNL-------------AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEH 255 ++R + K +PKT+ + R + + I L+ R K Sbjct: 230 RVQRMIKQVTIIDEKGNRKYKTIEQIPKTKN-SIRTVPIPSSLIPMLKEHRNRQREEKLK 288 Query: 256 IIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSY 315 V+ + + +VF G+ ++ + + + RAG+ +RK + Sbjct: 289 AGSVYLNDVEK------GYVFT-------TELGNTIDASNLLKTYKKILNRAGVPYRKFH 335 Query: 316 QSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 RHTYA G ++ +GH++ + +Y + + V LN Sbjct: 336 AIRHTYATKLFERGVPLKTVSELLGHSNISITANIYTHVIPKQKTNAVETLNDLF 390 >UniRef50_A7VEW1 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VEW1_9CLOT Length = 379 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 63/346 (18%), Positives = 128/346 (36%), Gaps = 41/346 (11%) Query: 33 EARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVR 92 E D+ + E ++ LK+ V ++ Y + + + E L + + ++ Sbjct: 61 ENATDMLVDAWFEYWIDLKKKTVRPNTVRNYSERYERNIKNVIENKLLTEVKPIHCQKIF 120 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKG-ISP-LK 150 ++ G T+ L + +F +N + NP K + + Sbjct: 121 SDMA-------------DEGYKTTTIYQTRIALYNMLEFAKENEVIITNPCKKSVKSDIG 167 Query: 151 ESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 + + L+ ++ R + A + Q + + ++ TG+R GEL L WEDI+ + T+ I Sbjct: 168 KPSDKKEALTIDDQRRFLAAAKGQSYEYQYRFALQTGLRTGELVGLKWEDINFERKTLTI 227 Query: 211 RRN------LAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY 264 R+ + + R PK+++G R I L AI L++Q R K + Sbjct: 228 ERSMEFRYKVGEWRVGPPKSKSG-YRTIPLTDEAICILKAQKEKNRKIKVIDKE------ 280 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACW 324 + + G + +AG++ + RHT+A Sbjct: 281 -------------WADTVFLCRKGQPVKNSTYDTALFKICDKAGIKRFSMHVLRHTFATR 327 Query: 325 SLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + G P + +GH++ + +Y E ++ L+ L Sbjct: 328 CIEGGMMPKTLQKILGHSNIGITMNLYVHITEEEKQKEIDLVAEAL 373 >UniRef50_C7TH34 Phage-related integrase n=1 Tax=Lactobacillus rhamnosus Lc 705 RepID=C7TH34_LACRL Length = 383 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 63/380 (16%), Positives = 130/380 (34%), Gaps = 58/380 (15%) Query: 18 YAKQFPSSRNLEKFGE------------ARQDLTIKELAEKFLALKETEVAKTSL-NTYR 64 + + F + + +T K + ++ A + V +++ TY Sbjct: 35 HKRGFRDKKEAALAASRFTLDADAGSLSTNRSMTFKAVYLEWDAAYKNTVRESTYERTYI 94 Query: 65 AVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTN 124 + K++L + G K + + I +L + + ++T Sbjct: 95 QIKKHVLPLFGNKPI-NKITTAQLQQAVNQWSKQVTRNY---------------RRWLTT 138 Query: 125 LNAVFQFGVDNGYLADNPFKGISPLKESRTI----PDPLSREEFIRLIDAC---RNQQAK 177 + + +F + GY+ NP + KE I + ++E R + Q Sbjct: 139 ASRILRFALRRGYINKNPADLVIIPKEKEQIGDVAANFWDKQELTRFFSYIDAKQEPQKT 198 Query: 178 NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-----KDRFTVPKTQAGTNRVI 232 L+ + + G+R GE AL W+DI + T+ + + L+ + PKT+ + R I Sbjct: 199 ALFRILAFGGLRRGECLALTWKDISFTDSTITVNKTLSQGMNGRQLVQPPKTRK-SRRTI 257 Query: 233 HLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFT 292 + + AL+ + + G + VF + H Sbjct: 258 TMDSKTMSALKHWRLVQ--------LQKYMALGFNANKPDQLVFSNSKN-------KHLL 302 Query: 293 VDSIRQMWDAAIKRAGLRH-RKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 + + + H + RH++A +AGA + ++GH+D + +Y Sbjct: 303 LHKPADWLKSIEDTHKIEHRITIHGFRHSHASALFSAGATVKEVQERLGHSDVKTTLNIY 362 Query: 352 GKWMSENNNAQVALLNTQLS 371 N V L L+ Sbjct: 363 THVTKNQNKEAVNKLVAYLN 382 >UniRef50_C3IU95 DNA integration/recombination/inversion protein n=2 Tax=Bacillus thuringiensis RepID=C3IU95_BACTU Length = 392 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 59/385 (15%), Positives = 121/385 (31%), Gaps = 52/385 (13%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK 68 + K A + D+ K+ +++L + +SL + Sbjct: 38 FKTKKEAQLAAARIEQEV-ANGTYINEPDILFKDFVQEWLNIYSKSTKISSLRVRQKQSN 96 Query: 69 NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAV 128 ++ + I K+ +L G + T++ T + Sbjct: 97 KLVDFFANIKM-KDITKKMYQTALNDL-------------HDKGYAFNTLDGIHTAGRMI 142 Query: 129 FQFGVDNGYLADNPFKGISPLKE---------SRTIPDPLSREEFIRLIDACRN---QQA 176 F+ ++ + NP + ++ + L +EE + + Sbjct: 143 FKKAIELQIIKSNPTDNVKLPRKVETVEDIENDKKAIKYLEKEELAHFLQVAKEKGLDND 202 Query: 177 KNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL-------AKDRFTVPKTQAGTN 229 + + Y+G+R GEL AL W D+D +N T+ I + L PKT+ G+ Sbjct: 203 YVFFSILAYSGLRAGELLALKWTDVDFENNTIKITKTLYNPDNNSQHYHLLTPKTK-GSI 261 Query: 230 RVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGD 289 R I + + + L+S K + + + K G Sbjct: 262 RTIKMDQGIMKLLKSHKAKQNELKLYTRPQ----------------YVDQGFVITKASGY 305 Query: 290 HFTVDSIRQMWDAAIKRAGL-RHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVF 348 + I+ IK + + ++ + RHT+ + AG I ++GH D + Sbjct: 306 PEVMKMIQNRLKRLIKLSNITKNITPHSFRHTHTSLLIEAGVGIKEIQQRLGHTDIETTM 365 Query: 349 QVYGKWMSENNNAQVALLNTQLSEF 373 +Y + + F Sbjct: 366 NIYAHMTKNMEEKASQKFSELMKGF 390 >UniRef50_C9N6T9 Integrase family protein n=7 Tax=Streptomyces RepID=C9N6T9_9ACTO Length = 382 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 60/380 (15%), Positives = 123/380 (32%), Gaps = 36/380 (9%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAK-TSL 60 R +V + D +Q R+ + + + E +L K ++L Sbjct: 35 RKRKTVYGSTWEEC-DTKRQELVLRDRQGIPTPTRSAKLSEWLPYWLEHYVQSRRKLSTL 93 Query: 61 NTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 + Y A ++ ++ ++G K L +++ + + + Sbjct: 94 DKYEAHVRLYLIPMLGTKRLE-TLSVADVRRFIARVQAAQTAATA--------------K 138 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNL 179 L V + N + P + + P S +E + ++A R Sbjct: 139 EAHRVLRTALTAAVREELITRNVASLVEPPRVKQREISPWSLKETLSFLEAARRDPLYAA 198 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFT--VPKTQAGTNRVIHLIKP 237 + +++ G+R GEL L W D+DL N + +R + R T ++ RV+ + Sbjct: 199 FMLAICMGLRRGELVGLRWTDVDLDNRVLHVRHQTQRRRGTLYDDDPKSRRRRVVPMPAL 258 Query: 238 AIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIR 297 + LR R + + G ++ Sbjct: 259 CVAPLRWHRLKQRET----------------FADTGVTWSESGYIFATRNGRPVEPRNVY 302 Query: 298 QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 + + AGLR + + +RH A AG P I +GH+ + VY + + Sbjct: 303 RSFTRVAAGAGLRVVRLHDARHGCATLLTAAGVAPRVIMEILGHSQISITMDVYTHVVHD 362 Query: 358 NNNAQVALLNTQLSEFAPTM 377 ++ ++ L P Sbjct: 363 TQREAISHMDRLLKRRLPGA 382 >UniRef50_D2SBK5 Integrase family protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SBK5_9ACTO Length = 365 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 76/344 (22%), Positives = 127/344 (36%), Gaps = 52/344 (15%) Query: 32 GEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLE 90 R +T++ AE++LA +T + ++L YR++++ IL G LA I + Sbjct: 57 APERGRVTVEAWAEQWLA-AQTGLKPSTLYRYRSLLRAQILPRWGRHRLAD-ITHADVAA 114 Query: 91 VRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK 150 +L+ G G + TV L + V +G + NP G+ + Sbjct: 115 WVAQLVAG-------------GLAPPTVRQAHRVLALILTLAVRDGRIPRNPAAGVPLPR 161 Query: 151 ESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 R P L+REE RL DA ++ + YTG+R GE+ AL +D + + Sbjct: 162 TRRADPRFLTREEVERLADAAGE--YGDVVRLLAYTGLRFGEMAALRVRRVDFLRRRLTV 219 Query: 211 RRNLAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 + + + PKT R + + ++ L Sbjct: 220 AESATEVGGTVEYGTPKT--HQQRTVPIPAVLVEPLSR--------------------RC 257 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW-DAAIKRAGLRHRKSYQSRHTYACWS 325 K + V G + R+ + D A K AGL + RHT A Sbjct: 258 GGKGRDDLVLTSPG-------GAVLRSGNFRRRFFDPAAKAAGLEDLSPHDLRHTAASLL 310 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQ 369 + +GAN + +GHA A M VY ++ A ++ Sbjct: 311 VASGANVKAVQRMLGHASAAMTLDVYSGLFDDDLGALADRMDAA 354 >UniRef50_A0JQR3 Phage integrase n=3 Tax=Lactobacillus salivarius RepID=A0JQR3_LACS1 Length = 381 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 60/353 (16%), Positives = 128/353 (36%), Gaps = 41/353 (11%) Query: 29 EKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKL 88 ++ ++ + ++ +++LAL + V ++ + + ++ + Sbjct: 59 NQYFKSVKSGKFGDVLDEWLALHKETVKASTWQ--------FIELRANNHVRPYFKDMYV 110 Query: 89 LEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISP 148 ++ + S V N + + G + NP + Sbjct: 111 DKITLRHCQDFVNKTFKKAPVAYVYSLSIVKNT-------LDYALRLGMIESNPMLYVIK 163 Query: 149 LKES----RTIPDPLSREEFIRLIDACRNQQA--KNLWCVSVYTGVRPGELCALGWEDID 202 K+ + +++E + +D ++ L+ + Y+G+R GE AL W D+D Sbjct: 164 PKKQASISDKHDNYYNKDELKKFLDVAKDTSLKKYTLFRLLAYSGMRIGECLALTWHDLD 223 Query: 203 LKNGTMMIRRNLAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIID 258 KN T+ I + LA+ + PKT+A +NRVI L I L+ R Sbjct: 224 YKNNTIAINKTLARTNNGIKIQTPKTKA-SNRVISLDNETIQVLKMWQLEQRK------- 275 Query: 259 VHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSR 318 + G +F ++ V ++R K+AG+ ++ R Sbjct: 276 -QLLKVGINAMDSKQLIFSNGKNSF-------IIVPTVRLAIKQIAKKAGIHSITTHGFR 327 Query: 319 HTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 HT+A +G + + ++GH++ Q +Y M E + ++ Sbjct: 328 HTHATLLFASGLDIKQVQARLGHSNVQTTLNIYTHAMKEKQDKIGDEFAKYIN 380 >UniRef50_A3DCS0 Phage integrase n=6 Tax=Bacteria RepID=A3DCS0_CLOTH Length = 506 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 121/344 (35%), Gaps = 39/344 (11%) Query: 37 DLTIKELAEKFLALKETEVAKTSLNTYRAVIKN-ILSIIGEKNLASSINKEKLLEVRKEL 95 + + ++L + T V +T+ +Y + I+ I+ +K L + E + Sbjct: 172 SVLFVDFLLEWLEMMRTRVRETTYASYNSGIRQSIIPYFMDKKL----TLTDIEE-NPKY 226 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 L + + + G S +V N+ Q G + NP I K+ Sbjct: 227 LQDFYQHELS-----KGLSPNSVLRRHANIRKALQHAFHLGLIKSNPADRIERPKKQDYT 281 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDL--KNGTMMIRRN 213 + EE +L A + + ++ Y G+R E+ L W+ ID + + I+ Sbjct: 282 ASYYTDEELAKLFKAAKGDPLELPIVLAAYYGLRRSEIIGLRWDAIDFNPDDPKITIQFT 341 Query: 214 LAKDRFTV-----------PKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFR 262 + + F K++A + R + L+KP D L + ++ + Sbjct: 342 VTEVNFGDGQGNVIIEKEGTKSKA-SKRTLPLVKPIADLLLQKKKDIENNRRLCGSCYND 400 Query: 263 EYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYA 322 +Y V G+ + I Q + +++ GL+ + + RH+ A Sbjct: 401 KYL--------------DFVHVNEIGERMKPNYISQHFALLLEKHGLKKIRFHDLRHSCA 446 Query: 323 CWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALL 366 G + I +GH+D +Y + A + Sbjct: 447 SLLYANGVSLKQIQEWLGHSDISTTANIYTHLDYNSKIATANAI 490 Score = 59.0 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 12/120 (10%) Query: 30 KFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNIL-SIIGEKNLASSINKEKL 88 + + ++ +++L K + + + Y + + NL +L Sbjct: 58 EDIASGKNTPYHVFLDRWLKDKMNDFDEETYAVYSHNARVFIGPYFKSLNL-------QL 110 Query: 89 LEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISP 148 E+R L Y N+ T+ S T+ + + ++ G++ NP KGI+P Sbjct: 111 HEIRTSTLEAYY----NHEKTKNHASKKTILQIHEIITLSLNYAIELGWIESNPAKGINP 166 >UniRef50_A9KI10 Integrase family protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KI10_CLOPH Length = 443 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 134/386 (34%), Gaps = 54/386 (13%) Query: 13 TGVFDYAKQFPSSRNLEKFG--EARQDLTIKELAEKFLALKET-EVAKTSLNTYRAVIKN 69 V + ++ +++ + G + +++ E ++ ++ V + ++ +Y + Sbjct: 84 RDVKELEERLNNAKYEIQHGIYAKEERISLNAWYETWINEYKSMTVKQGTVESYECMYLY 143 Query: 70 ILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVF 129 + K L I E + ++ +L G S T++ L A+F Sbjct: 144 YVKPELGKRLIKDIRGEHIQKLYNDLSRN-------------GYSKSTISLIHVLLGAMF 190 Query: 130 QFGVDNGYLADNPFKGISPLK-ESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGV 188 + + N + NP + + E + L+ +E L+ + + + +S+ TG+ Sbjct: 191 KQALKNELIKKNPVDFTTLPRAERKKERRVLTLKEQEILLKEITGHELEPVVRLSLATGL 250 Query: 189 RPGELCALGWEDIDLKNGTMMIRRNLAKDRFT------VPKTQAGTNRVIHLIKPAIDAL 242 R GE+ L W D+D + +R L R PKT + R I L+ L Sbjct: 251 RVGEVTGLEWCDVDFNKKEVTVRGTLKCTRKGMEYYKDTPKTDK-STRSIPLLDNMELML 309 Query: 243 RSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDA 302 + + + K + G E ++ G F+ IRQ Sbjct: 310 KRYRIIQKEHKLSMGIDWKPIEGL------------EDLVFLREDGKPFSGQHIRQQLVH 357 Query: 303 AIKRAG------------------LRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADA 344 + + + RHT+A +L G P + +GH+ Sbjct: 358 IVDGINEKYYSKKSIRQEKLLEEKFDYFTPHALRHTFATRALENGIPPKVVQEILGHSSI 417 Query: 345 QMVFQVYGKWMSENNNAQVALLNTQL 370 M +Y + + ++ L + + Sbjct: 418 TMTLDLYTHVLPQTKAQEMKKLESLI 443 >UniRef50_C2BD46 Possible phage integrase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BD46_9FIRM Length = 377 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 62/383 (16%), Positives = 131/383 (34%), Gaps = 49/383 (12%) Query: 5 SSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYR 64 + + + + +++ T KE+ E++L L V +S + Sbjct: 29 KEIRTNRSGFTSKKQAELAYANLRNENLRRKKNPTFKEIGERWLELYSKTVKYSSYQRTK 88 Query: 65 AVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 ++ +I IG K L SI L E+ + + + Sbjct: 89 SLFNTHIYPFIGNK-LLKSITTAMLQELTNKKSKEL----------------ASFSKINA 131 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPL-----KESRTI-PDPLSREEFIRLIDACRNQ--- 174 + VF + + + NP + R + ++E + AC+ Sbjct: 132 QIKRVFDYAISRDIVDYNPALSVIYPITNVNSVDRYESIEFWEKDELKEFLTACKKDLDF 191 Query: 175 QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-----KDRFTVPKTQAGTN 229 + + YTG+R EL AL W DID T+ I ++L+ K + KT+ + Sbjct: 192 MWFCYFWILSYTGMRKSELQALEWADIDFNRRTININKSLSVYKDNKKFISSTKTKN-ST 250 Query: 230 RVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGD 289 R+I + + L + + + +VF + Sbjct: 251 RIITIDSITVKLLLDWKQQQSEIYKKTVIKGKTQK---------YVFTDKSLELT----- 296 Query: 290 HFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQ 349 + ++ R+ + +K LR + + RHT+A AG + + +++GH++ + Sbjct: 297 --SHNAPRKRFLRVLKNNNLRKIRLHSLRHTHASLCFEAGMDIKDVQHRLGHSNIETTLN 354 Query: 350 VYGKWMSENNNAQVALLNTQLSE 372 +Y ++ +S+ Sbjct: 355 IYVHISKIKERKSISKFEDFMSD 377 >UniRef50_A6TLJ2 Phage integrase family protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLJ2_ALKMQ Length = 382 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 63/352 (17%), Positives = 116/352 (32%), Gaps = 45/352 (12%) Query: 35 RQDLTIKELAEKFLALK-ETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVR 92 ++ + F+ E + + S + +IK +I G + I + L Sbjct: 59 PTTISFSDYLNYFIENYIEIHLRENSQRARQHIIKNHIRPAFGNYKIM-QITSQALQNFI 117 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 + S ++ L+ F+ V+ ++ NP + K Sbjct: 118 TK--------------KSKAYSKNYISMIHATLSTAFKMAVEWEFIRINPMTRVKVPKRD 163 Query: 153 R----TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTM 208 LS EE R + + + ++ +TG+R GE+ AL W DID N + Sbjct: 164 DQEMDKEIKTLSPEEVNRCAERLQGTHHYIPFMIAFHTGLRAGEVSALQWSDIDFDNQML 223 Query: 209 MIRRNLAK------DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFR 262 + + L F PKT+ +NR I + I L+S + +K Sbjct: 224 SVTKRLDYSASKENWEFKPPKTR-SSNRTIAIGNELITILKSHSINQKKNKLKYGKH--- 279 Query: 263 EYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYA 322 + G+ +I ++ + I+ + + RHT+A Sbjct: 280 -------------YTENDFICTFENGEVVITKAIGRVSEIIIRDVKI-DFNFHMLRHTHA 325 Query: 323 CWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFA 374 L AG NP + ++GH+ + Y E V L + Sbjct: 326 TMLLEAGINPKVVQERLGHSTVSITLDTYSHITIEFQKTAVLEYEKYLQKIK 377 >UniRef50_C8NHZ6 Phage integrase family site-specific recombinase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHZ6_9LACT Length = 393 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 124/360 (34%), Gaps = 53/360 (14%) Query: 35 RQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRK 93 +Q T +EL ++L + V ++ K +IL G+ I+ + + + Sbjct: 70 KQKFTYRELYNEWLVTYQKRVRPSTFQATVTYFKKHILPAFGDYY----IDTITIQDCQA 125 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE-- 151 ++ Y + +Y +F++ + NP + K Sbjct: 126 QVNRWYSNY------------PKSTQSYKIYAQMIFKYAQKLNLIEKNPMSLVDLPKSGD 173 Query: 152 -SRTIPDPLSREEFIRLIDACRN-QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMM 209 RE IR ++ ++ + + YTG+R GE AL W DID +N ++ Sbjct: 174 FKDDKLKYYDRETLIRFLEYIEPFKEVYTFFYLLSYTGLRCGEAFALTWNDIDFRNHSIS 233 Query: 210 IRRNLAK----DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 + + +A+ + KT+ G R I + + L+ Sbjct: 234 VNKTVARSMEDKYISQTKTKNGM-RTIRINGSLERLISEWKELSGNE------------- 279 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWS 325 T+VFQ ++ ++ ++ + ++ + RHT+A Sbjct: 280 -------TYVFQNRNNSF-------YSSNTAVYWLNQILEGTNFPRITPHGFRHTHASLL 325 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNEAMKN 385 AGA+ I +++GH D Q +Y + + + +S + +N Sbjct: 326 AEAGADLKDIQDRLGHGDIQTTANIYTHVTNNKKDNTNDKFDKLMSIEGQKDGQKQKTEN 385 >UniRef50_Q65KT3 Lambda integrase-like protein(Phage related) n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65KT3_BACLD Length = 379 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 61/386 (15%), Positives = 134/386 (34%), Gaps = 50/386 (12%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTS- 59 G +++ KT A + ++ AR D+T +++ +++ + + +++ Sbjct: 28 GNRKTTTRRGFKTKKEAVAAAAEFQKEIDNNALARNDITFEDVFKEWWDVHSKTIKRSTR 87 Query: 60 LNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 K+IL G+ + I + +V + +V Sbjct: 88 YRKLSNFKKHILPHFGKLKI-KDITRAYCQKVINLIAQDID----------------SVQ 130 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR-------TIPDPLSREEFIRLIDACR 172 N N VF++ + Y+ NP + + K+ + ++E ++ Sbjct: 131 NVKIQANLVFKYALRMEYITKNPMEFVVIPKKEENFLSQEEEKRNFWEKDEIKTFLEKAH 190 Query: 173 NQ---QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL----AKDRFTVPKTQ 225 +Q Q ++ V ++TG+R GEL AL W+D+DLK T+ I++ + K+ K + Sbjct: 191 SQLAPQDYVMFYVLIFTGMRKGELIALEWKDVDLKEKTINIKQTMFFENGKEVIQTTK-K 249 Query: 226 AGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVK 285 + R+I + L+ T + +Y ++ Sbjct: 250 YHSKRIITIDDQTAQILKKWRTQQKEMLLSNGITSEAKY-----------------VLIR 292 Query: 286 NYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQ 345 + + + I + L + RH++A AGA+ + ++GH + Q Sbjct: 293 GDMRPLRLAYPNDLLNRMITKNKLHRITIHGFRHSHASILFEAGASIKEVQARLGHKEIQ 352 Query: 346 MVFQVYGKWMSENNNAQVALLNTQLS 371 +Y + Sbjct: 353 TTMNIYTHVTKTAKAKTAETFKKYME 378 >UniRef50_D0L542 Integrase family protein n=3 Tax=Bacteria RepID=D0L542_GORB4 Length = 463 Score = 260 bits (664), Expect = 9e-68, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 113/351 (32%), Gaps = 42/351 (11%) Query: 31 FGEARQDLTIKELAEKFLALKET-EVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKL 88 Q LT+ + +L KE + T+L +YR + I+ IG L + + Sbjct: 56 IVAVDQRLTLAQYLASWLTAKEQAGIRATTLRSYRQHVDSYIVPTIGNVRLRD-LRATHV 114 Query: 89 LEVRKELLTGYQIPKSNYIVTQPG------RSAVTVNNYMTNLNAVFQFGVDNGYLADNP 142 + E+ + P + + S T L + ++ N Sbjct: 115 EHMLSEIAKPPKKPAKGVAIGKGKRRNPKALSPATQRRVHATLRSALTSAKRKHLVSFNA 174 Query: 143 FKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDID 202 + + SR P + +D + + TG+R GE + W D+D Sbjct: 175 AADMELPRASRPKVKPWEASDLGAFLDHATKDRLGAFFETIAMTGLRRGEALGIRWPDVD 234 Query: 203 LKNGTMMIRRNLAKD-----------------RFTVPKTQAGTNRVIHLIKPAIDALRSQ 245 + + + + L + RF KT +G R++ L + L +Q Sbjct: 235 FEKARVTVNQQLVEVDGTGIDCPFCGGEHKQFRFGPCKTASGEARIVDLDSGTLGVLMAQ 294 Query: 246 MTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIK 305 +E D + VF + G + + A Sbjct: 295 RLRQEQEREQWGDAY---------NDHQLVF-------AREDGSPIPPADVTAKFHALTD 338 Query: 306 RAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 AGLR + + RH A L AG A ++ ++GH+ + Y + Sbjct: 339 EAGLRRIRLHDLRHGQASLMLAAGVPIAVVSKRLGHSSISITSDTYSHLLD 389 >UniRef50_A3D4Z5 Phage integrase family protein n=3 Tax=Shewanella RepID=A3D4Z5_SHEB5 Length = 392 Score = 260 bits (664), Expect = 9e-68, Method: Composition-based stats. Identities = 96/386 (24%), Positives = 170/386 (44%), Gaps = 48/386 (12%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQ---------DLTIKELAEKFLALKE 52 +L + +K G FDY FP+S +E F + + + A +L K Sbjct: 40 KLLLMLEQQMKAGSFDYRHHFPNSPKVEHFTQLAKLSQFHAAGGRMLFSAFANLWLDEKR 99 Query: 53 TEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQP 111 E + + T +++ +++ +G K +A +I K+ +L +R L +T Sbjct: 100 VEWRASQIETVEGILRCHLIPAMGTKMIA-TICKQDILGLRLSLCE-------VDALTNR 151 Query: 112 GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC 171 SA +N+ MT L + + + P++ I L RT P S E R+I++ Sbjct: 152 SLSASRINHIMTYLRLILNEAAE-RFGFQTPWRNIKALPMPRTDIQPFSLVEVYRIIESV 210 Query: 172 RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRV 231 R+ + + V +TG+R GE+ L WE+ID N + IR++L + + KT + ++R Sbjct: 211 RDD-FRPYYTVRFFTGMRTGEIDGLTWENIDFTNRLIHIRQSLVRGSLGLTKT-SSSDRA 268 Query: 232 IHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHF 291 I + +P +AL++Q LT++ + FVF GD Sbjct: 269 IAMNQPVYEALQAQSELTKIRGK-------------------FVFCNR-------RGDAL 302 Query: 292 TVDSIRQM-WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQV 350 + ++ + W ++ L R YQ+RHT A L AG +P +IA Q+GHA+ M+F+V Sbjct: 303 SHQNVTKRVWYPLLESLALEKRNPYQTRHTAATLWLAAGESPEWIARQLGHANTGMLFRV 362 Query: 351 YGKWMSENNNAQVALLNTQLSEFAPT 376 Y +++ A + Sbjct: 363 YSRYVPNLLGQDGAAFERLIGNGPKG 388 >UniRef50_C2YK72 Phage integrase n=3 Tax=Bacillus cereus group RepID=C2YK72_BACCE Length = 387 Score = 260 bits (664), Expect = 9e-68, Method: Composition-based stats. Identities = 71/394 (18%), Positives = 125/394 (31%), Gaps = 53/394 (13%) Query: 8 CYAIKTGVFD--YAKQFPSSRNLEKFGE----ARQDLTIKELAEKFLALKET-EVAKTSL 60 G F Q +++ EK +T E ++L + VA + Sbjct: 23 YKETSKGGFKTKKEAQLAAAKVEEKLATGGNLKDSKITFNEYLYEWLNTYKKGNVAPRTY 82 Query: 61 NTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 Y I+ +IL GE L + + K + L+ S TV Sbjct: 83 MVYEKNIRLHILPAFGELRL-KDLTRIKYQKFINGLM--------------EKYSKKTVE 127 Query: 120 NYMTNLNAVFQFGV-DNGYLADNPFKGISPLKE----SRTIPDPLSREEFIRLIDACRNQ 174 ++ V + G L NP I +E + ++ + Sbjct: 128 TINVTMHHALDIAVNELGILEKNPTSKIKLRTTRVTSKDDEIKCYDIDELQQFLNYVLKE 187 Query: 175 Q----AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTV-----PKTQ 225 + +L+ TG+R GE AL WED+D + + I + L + + P Sbjct: 188 KGGFKYFSLFMFLSRTGLRIGECLALQWEDVDFEEQKLFINKTLINTKRSEKILFGPPKN 247 Query: 226 AGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVK 285 + R I L I L+ + + FVF E ++ Sbjct: 248 KSSKRTISLDPSTISHLKKMKIEQNKQVLKNGKYY---------KDYNFVFTHEDNSC-- 296 Query: 286 NYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQ 345 S+ + A K+ ++ + RHT+A L +GAN +++ ++GH+ Sbjct: 297 ----MLHPSSL-KFLLEASKKGNFKYITLHGFRHTHAVHLLQSGANIKYVSERLGHSSID 351 Query: 346 MVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPH 379 M VY V + L + Sbjct: 352 MTANVYLHITKSMEETAVNQYDEFLKSRGQIVGK 385 >UniRef50_A8LF05 Integrase family protein n=1 Tax=Frankia sp. EAN1pec RepID=A8LF05_FRASN Length = 416 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 68/385 (17%), Positives = 137/385 (35%), Gaps = 41/385 (10%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKE--TEVAKTS 59 R + + + ++ S+ + + + +L +E A+++ Sbjct: 55 RKRVPRYFRTQEEAIEEQRKARQSK-ADGLTTLDRRSRFADFLTYWLDEIVDPSERAEST 113 Query: 60 LNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 + YR ++ N ++ ++ +L+E++ E L + K+ G S T+ Sbjct: 114 KSNYRVMVNN--------HIRPALGSRRLVELKHEDLQRFLNRKAA-----DGYSTSTMR 160 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDP--LSREEFIRLIDACRNQQAK 177 + L V ++ N + + K + + LSR++ +RL+ ++ + Sbjct: 161 TLRSVLRQALNEAVITEKISRNVAETLRVPKARKPKRNVAALSRDDGLRLLAEAKSTRHY 220 Query: 178 NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD------RFTVPKTQAGTNRV 231 L+ + G+R GE AL W D D GT+ + R + + K+QAGT R Sbjct: 221 ALYVLLAMVGLRRGEALALRWSDFDESAGTLRVVRQVTRVSGVKGLVVGPTKSQAGT-RT 279 Query: 232 IHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHF 291 + L + L++ T R+ ++ +F V G H Sbjct: 280 LTLPTRCVRVLQAHRTAQHA---------HRQAAGKRWKENGLIFPSTV-------GTHM 323 Query: 292 TVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 + +RAGL H + RHT A + G + I +GH +Y Sbjct: 324 EPRGLNTHLSKLCQRAGLPHLGPHALRHTAATMAYALGVDWKQIQQMLGHTMLSTTMDIY 383 Query: 352 GKWMSENNNAQVALLNTQLSEFAPT 376 + + + L+ E Sbjct: 384 VDLVDSVHRDAASKLDAWFDEPDED 408 >UniRef50_UPI0001C375B8 hypothetical protein RflaF_20511 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C375B8 Length = 465 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 65/359 (18%), Positives = 124/359 (34%), Gaps = 33/359 (9%) Query: 32 GEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEV 91 E + + + ++L + VA+T+ YR V K + I E ++ L +V Sbjct: 84 DETASTMLLDDFFTEWLTYIKPNVARTTHLCYRKVSKRYMEYINENY--PNLT---LGQV 138 Query: 92 RKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE 151 + Y K G T Y L++ F + V + +P + + Sbjct: 139 NHNHIQNYLNYKL-----DSGCKGSTAKQYYLALHSAFAYAVKMELIPKHPMDKLVVPRA 193 Query: 152 SRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 R + +E L + + + + + ++ Y G+R E+ L W+ ID KN T+ I+ Sbjct: 194 ERHEATFYNADELNELFEVFKGDKLELVVNIAAYYGLRRCEILGLRWDAIDFKNKTITIQ 253 Query: 212 RNLA---------KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFR 262 R + K T R + LI + L + + K+ + + Sbjct: 254 RKIVSDYDDNGEIKIFVETRLKTNSTRRTLPLIPHIEEMLLEKKKMEVKFKKACGKSYNK 313 Query: 263 EYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYA 322 E+ + NYG+ + + Q + I R GL+H + + RH+ A Sbjct: 314 EF--------------DGFICRDNYGNMISPGYVTQHFHYIITRNGLKHLRFHDLRHSCA 359 Query: 323 CWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNE 381 L I +GH++ + +Y + L + E Sbjct: 360 SLLLAHDVPMKAIQEWLGHSNFSITANLYSHLEYNAKVNSAETIARVLGGKSEDKSEAE 418 >UniRef50_C7N6A1 Site-specific recombinase XerD n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6A1_SLAHD Length = 451 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 68/410 (16%), Positives = 136/410 (33%), Gaps = 67/410 (16%) Query: 8 CYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETE--VAKTSLNTYRA 65 K + + E +T+ E E +L ++T V++ ++ Y A Sbjct: 45 VRGTKAEAKKKRDEIRRQ-HEEGLAIDAGKVTVSEFIETWLEARQTTGKVSEFTIKNYHA 103 Query: 66 VIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNL 125 +K I IG+K L + + ++ +L + S T+N L Sbjct: 104 RLKTIEPYIGKKKL-NKVTAAEIERAYAQL------------KAKKSLSDTTLNKLHILL 150 Query: 126 NAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNL------ 179 +VF+ D + NP + + L++EE L+ ++A+ + Sbjct: 151 KSVFEKACDYDLILRNPCNKVESPSVDKPDRKSLTQEEGATLLHKLDLEEARIIQEMDEK 210 Query: 180 ---------------------------WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 +++ TG+ GE+ L W++++L+ T+ + + Sbjct: 211 EERQVKKGNQFGRSSIRGLANLGFTIGTRIALATGLHRGEVFGLTWKNVNLRQNTITVAQ 270 Query: 213 NLAK-DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 L K PKT AG R I + + LR R + Sbjct: 271 TLTKEGEIKDPKTGAG-RRTISIDESTAAHLRMWRKRQREELAKLAIKLG---------- 319 Query: 272 CTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGAN 331 G+ + + + W + AG + ++ RH+ A L G + Sbjct: 320 ------DATPVCCSERGEWVNLANFERWWRSFRDDAGFEGLRFHELRHSQATLLLANGTD 373 Query: 332 PAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNE 381 + ++MGHA+ + Y + EN+ L+ + + Sbjct: 374 LKTVQDRMGHANGAITLNWYAHAIPENDQKAAQLVGNLFGTPSKRTQRGQ 423 >UniRef50_C0EDT0 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDT0_9CLOT Length = 462 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 64/438 (14%), Positives = 134/438 (30%), Gaps = 86/438 (19%) Query: 8 CYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFL-ALKETEVAKTSLNTYRAV 66 I+ + F + +F + + + A++++ E + ++ Y + Sbjct: 40 KRQIEKELERQKVLFEENCRSGQFI--SGSIKLADFAQRWMSEYAEKHLKAKTIAHYNEL 97 Query: 67 IK-----------------NILSIIGEKN---LASSINKEKLLEVRKELLTG-------- 98 +K +++ + + I + + +K L Sbjct: 98 LKRILPALGHIKLDKLQPHHLIQFYDNLSESGIREDIKQRCSTDFKKVLKQHGFTKVELS 157 Query: 99 ---------------------------------YQIPKSNYIVTQPGRSAVTVNNYMTNL 125 + G +A T+N++ L Sbjct: 158 KRAGVSVATLDSVSQGKNITGQSARRICEAFHIKLQELFTPVDADRGLAAKTINSHHRLL 217 Query: 126 NAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC--RNQQAKNLWCVS 183 +++ V + NP + P K R L ++ +LI +Q + + + Sbjct: 218 SSMLNTAVQWQIIFSNPCDRVKPPKLERKEARYLDEKQTAQLITCLQREPEQYQTMVLLL 277 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNL----AKDRFTVPKTQAGTNRVIHLIKPAI 239 +YTG+R GELC L W D D+++ + I+R + F + RVI L A+ Sbjct: 278 IYTGMRRGELCGLEWPDFDMEHKLLYIQRESLYLPDRGIFEDTTKTYSSTRVIKLSDEAV 337 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 L + + D + G D++ Sbjct: 338 KLLIQHKFAQNAERAKLGDA----------------WVDTGKIFTTCTGKPIHPDTLTTW 381 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 + +++ L + RHT A + G N +A ++GHAD +VY + + Sbjct: 382 FHKFVQKNDLPPVSVHSLRHTNATLLIANGVNLTTVAGRLGHADTGTTTKVYAHAIKTAD 441 Query: 360 NAQVALLNTQLSEFAPTM 377 + L+ Sbjct: 442 EMAAETIQNILNPAKKEE 459 >UniRef50_C6MG53 Integrase family protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MG53_9PROT Length = 361 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 93/358 (25%), Positives = 165/358 (46%), Gaps = 44/358 (12%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDL-TIKELAEKFLALKETEVAKTSLNT 62 S+ Y IKTG FDY + FP S+ ++F + R DL TIKE +L + ++ ++L Sbjct: 46 LQSIKYEIKTGTFDYNRHFPYSKKAKEFRKNRPDLYTIKEALISWLQRNQAKLQLSTLQD 105 Query: 63 YRA-VIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 Y + + +++ G + S + K+ E EL S +N Sbjct: 106 YNSAIYHHLIPTFGNLTI-SELTASKVKEWLSEL----------------PCSNKRKSNI 148 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWC 181 +T L +F+ + + NP + L P+P ++EE I++++ QAKNL Sbjct: 149 LTPLRQMFEELYLDEIIDKNPLSRVKNLPNKTREPEPFTQEEIIKILNELTG-QAKNLIQ 207 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDA 241 + Y+G+R EL AL W++++ + + I++ + + KT++G R + L A +A Sbjct: 208 FAFYSGLRTSELIALCWKNVEFEQNRIFIKQAHVRGQLKDTKTKSGK-REVTLQPQAKEA 266 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWD 301 L +Q T VF + + + +W Sbjct: 267 LLNQQAFTGKQ-------------------NQIVFHNPKTKQPWKNDQPIRKN----VWI 303 Query: 302 AAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 A+K+AG+++R YQ+RHT+A L+ G ++A QMGH D M+ +VYG+W+ ++ Sbjct: 304 PALKKAGIKYRNPYQTRHTFASMLLSRGEKLLWVAQQMGHKDWGMIIKVYGRWIPQSK 361 >UniRef50_C0XLK8 Phage integrase family site specific recombinase n=6 Tax=Lactobacillales RepID=C0XLK8_LACHI Length = 401 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 64/381 (16%), Positives = 128/381 (33%), Gaps = 52/381 (13%) Query: 14 GVFDYAKQFPSSRNLEKFGEARQ-----DLTIKELAEKFLALK-ETEVAKTSLNTYRAVI 67 G + P + L+K+ ++ +++ + + E+ + Y +I Sbjct: 50 GKKKKQAEAPLRQALQKYENDGSVAKLTNMNVQQYFMYWYENYVQRELKPNTQINYLNII 109 Query: 68 -KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLN 126 K I+ IG + S I L + +L + + TV + + Sbjct: 110 NKYIIPKIGNFRIRS-IGPAALQNLVNDL-------------GETKLAKHTVQIIVMVIK 155 Query: 127 AVFQFGV-DNGYLADNPFKGISPLK------ESRTIPDPLSREEFIRLID-ACRNQQAKN 178 F+ V + ++P + I K +R ++ ++ +++ + Sbjct: 156 EGFKKAVYPYQLIKEDPARYIIMPKYHDDERITRKKLKIITMNQYEQILSITPPSNPFYI 215 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR-----NLAKDRFTVPKTQAGTNRVIH 233 ++ TG+R GE+C L W ++DL T+ +++ + K PKT + R I Sbjct: 216 PLQIAFGTGMRRGEVCGLTWTNVDLNGHTIEVKQAMMQESKGKFSIVTPKT-TSSYRTIS 274 Query: 234 LIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV 293 + + +D LR + + K G T Sbjct: 275 IGESLVDLLRQHKKHQMEERLRYGQY----------------YHESNFVCTKENGIPVTP 318 Query: 294 DSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGK 353 ++I+ D K G + RHT+A L GAN I ++GH+ Y Sbjct: 319 NTIKYQCDRIQKELGFP-FNFHSLRHTHATMLLEHGANIKDIQARLGHSRIATTMDTYSH 377 Query: 354 WMSENNNAQVALLNTQLSEFA 374 + V + + E Sbjct: 378 VTHKMQRQTVNIFERIMKESK 398 >UniRef50_A8MGA1 Integrase family protein n=7 Tax=Clostridiaceae RepID=A8MGA1_ALKOO Length = 380 Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats. Identities = 69/380 (18%), Positives = 126/380 (33%), Gaps = 36/380 (9%) Query: 4 RSSVCYAIKTGVFDYAKQFPSS-RNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLN 61 R+ + + + L + +T+ E ++ + + N Sbjct: 25 RNKIERKGGKTKKEALNALNEALTKLGSGYVEPKKITVHEYMTDWVENYIKENRKLNTYN 84 Query: 62 TYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 Y+ + +L I L EV+ L + + + G S T+ N Sbjct: 85 RYKEIYNR--------HLKPYIGHLGLSEVKPIHLDQMLLGE-----KKKGLSGSTLQNI 131 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWC 181 LN+ F V + DNP + I K + + L+ EE +L DA + + Sbjct: 132 YGTLNSAFNRAVKLQIMYDNPLRFIDRPKRDKFVASTLAVEEIGQLFDALDTSKYNDYIM 191 Query: 182 -----VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVI 232 + + G+R GEL L W+ ID + I NL T PKT R + Sbjct: 192 SLGLKIVLELGLRRGELAGLEWKYIDFNKQIITIANNLVDTYTEVSLTTPKTDE--RRDL 249 Query: 233 HLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFT 292 ++ K + L+ L ++ + ++ F G + Sbjct: 250 YVSKGLMQLLKQHKVLQTKNRMKYRPHY---------KENEFNGNVCDFVMTWEDGTYVH 300 Query: 293 VDSIRQMWDAAIKRAGL-RHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 + ++ +K+ R+ + + RHT A L G + I ++GH+D +Y Sbjct: 301 PNYYTVKFNKLLKKVNFDRNIRFHDLRHTNATLLLQQGIDFKVIQTRLGHSDINTTLNIY 360 Query: 352 GKWMSENNNAQVALLNTQLS 371 E L L Sbjct: 361 SHVNVEMQKKATEKLIEILG 380 >UniRef50_Q8ETV2 Integrase n=3 Tax=Bacilli RepID=Q8ETV2_OCEIH Length = 392 Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 124/358 (34%), Gaps = 39/358 (10%) Query: 29 EKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKL 88 E LT +E+ E++ EV T++ + + K+ Sbjct: 58 ELGIRQNDQLTFQEVFEEWFKQHRREVKPTTVYAMESKFNR--------RILPVFGPYKM 109 Query: 89 LEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISP 148 ++ + + + T +Y N VF++ + + NP ++ Sbjct: 110 KDITRSHCQKAINGWAKEL--------KTFKDYKIQANQVFRYAMKMDMIKRNPMDYVTL 161 Query: 149 LKES---------RTIPDPLSREEFIRLIDACRNQQA-KNLWCVSVYTGVRPGELCALGW 198 K +REE ++A + + + +TG R GEL AL W Sbjct: 162 PKLKHEMEYVAELEEKKHYYTREELRTFLEAIQKDDMAYTMLRLLSFTGARKGELYALHW 221 Query: 199 EDIDLKNGTMMIRRNLAK----DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKE 254 D+D ++ +++ L + KT+A + R++ + + L+ + Sbjct: 222 SDVDFHQKSISLKKTLIYTGGEKQLQTSKTKA-SRRIVSVDDETLAILKKWRSKQIQRYL 280 Query: 255 HIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRA-GLRHRK 313 + + +F V ++K+ D+ + + + ++ L K Sbjct: 281 TLELAAPFQS-----DDKQPIFT--VYNQLKHEMDYCRLAYLNDKLERIYQKNPELPQIK 333 Query: 314 SYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 ++ RHT+A AGA+ + +++GH D Q +Y E + ++ Sbjct: 334 VHEFRHTHASLLFAAGASIKDVQSRLGHTDIQTTMDIYTHVTDEAKEKTAEMFQKYMT 391 >UniRef50_Q88SM0 Prophage Lp4 protein 1, integrase n=1 Tax=Lactobacillus plantarum RepID=Q88SM0_LACPL Length = 388 Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats. Identities = 71/381 (18%), Positives = 129/381 (33%), Gaps = 58/381 (15%) Query: 18 YAKQFPSSRNL------------EKFGEARQDLTIKELAEKFL-ALKETEVAKTSLNTYR 64 + + F + + + A ++T EL K+ + +V +++ Sbjct: 39 HKRGFKTKKEAQLWTSNVQTDFTKNGFIANDNITFAELYTKWFNEDYKEQVKESTYMITD 98 Query: 65 AVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 + + +IL +G + + I + + + L T + T Sbjct: 99 DIFRLHILPELGSQRV-KRITVAQCQSIVHKWLNQGF---------------KTYRRFRT 142 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRT----IPDPLSREEFIRLIDAC---RNQQA 176 +VF FGV NP S K+ D + E + +D N QA Sbjct: 143 YAISVFDFGVRMELTTRNPMAKTSIPKQKTKPQAPHVDFYEKSELLHFLDCASKHENPQA 202 Query: 177 KNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN-----LAKDRFTVPKTQAGTNRV 231 + + +TG+R GE AL W DI+ + + + + + PKT + R Sbjct: 203 FMFFRLLAFTGLRRGEALALQWSDINFETNELTVNKTQAVGKRWRTIIQTPKTNT-SYRT 261 Query: 232 IHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHF 291 I L L E G VF + + Sbjct: 262 IVLDPDTAQWLHKWKMTQAR--------QCFELGFNANDPSQLVFTNQQN-------KLM 306 Query: 292 TVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 + ++ + K+ GLRH K + RHT+ + A A ++ +GHAD ++ Q+Y Sbjct: 307 SPSTVNYFNWSICKKYGLRHIKIHAFRHTFCTLAFEAHAGINEVSKTLGHADLKITEQIY 366 Query: 352 GKWMSENNNAQVALLNTQLSE 372 + N + L +SE Sbjct: 367 LHVTKKQKNETASKLARYMSE 387 >UniRef50_C9A167 Integrase n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A167_ENTGA Length = 377 Score = 256 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 65/348 (18%), Positives = 116/348 (33%), Gaps = 61/348 (17%) Query: 39 TIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLT 97 T +++ + +T V ++L V K +IL G K + +++ Sbjct: 75 TYEQIYNLWYEEYKTTVKASTLLKTERVFKNHILPAFGNKPI---------QDIKPMDAQ 125 Query: 98 GYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE-----S 152 +V A V NY +F + + + NP K I Sbjct: 126 NQMNIWHKKLVR-----ASMVMNYAGL---IFDYAIRMQLINMNPTKVIKKPVRKESVRE 177 Query: 153 RTIPDPLSREEFIRLIDACRNQ---QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMM 209 + ++E + + A N +A + + +TG+R GE AL W DIDL+ T+ Sbjct: 178 DKDMNFYDKDELKKFMAALENNNNFRAFVYFRLLAFTGMRKGESLALKWSDIDLEKQTLY 237 Query: 210 IRRNLAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 I + +++ PKT + R I + + L+ Sbjct: 238 INKAVSRSATGLYIQTPKTPSSIRR-ISIDDKTVSILQEYKKE----------------- 279 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRA--GLRHRKSYQSRHTYAC 323 VFQ G + R+ + A+K + + RHT+A Sbjct: 280 ----SPDGLVFQS-------EDGGILSPAKPRKWYLTAMKNLPDDFKQISIHGFRHTHAS 328 Query: 324 WSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 AGA+ + +++GH+D Q VY N + Sbjct: 329 LLFEAGASIKDVQSRLGHSDIQTTMDVYTHVSKTAKEQLANRFNNYVD 376 >UniRef50_C2VI23 Site-specific recombinase, phage integrase n=3 Tax=Bacillus cereus group RepID=C2VI23_BACCE Length = 392 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 75/376 (19%), Positives = 134/376 (35%), Gaps = 36/376 (9%) Query: 1 GELRSSVCYAIKTGVFDYAKQFP--SSRNLEKFGEAR-QDLTIKELAEKFLALKETEVAK 57 G+ R K Y +S + + + +LTI E + + + E Sbjct: 36 GKRREKYKQGYKLENEAYRDLLEVKTSILSGEVKQVKNSNLTISEWLDIWYETHKNEWKI 95 Query: 58 TSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVT 117 +S + IK + + K KL E L + T Sbjct: 96 SSCSQRENAIKY--------QMKPLLGKYKLAE-----LDKSTYKRVYINELLKKYKPST 142 Query: 118 VNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQA- 176 V + VD+ + N F I+ E +T+ + + EE I A + + Sbjct: 143 VQLFHRLFKIAINAAVDDELIPRNRFNKITIPNEEKTVENFFTAEELNEFIAAAKKHENI 202 Query: 177 --KNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHL 234 ++ + +TG+R GE L W++I+ + T+ + R PKT+ + R I + Sbjct: 203 TNYSIILLLAFTGLRKGEALGLQWKNINFEEKTLTVERTRDNKGTRTPKTKN-SFRTILI 261 Query: 235 IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVD 294 I+ L++ T + +K Q F+F S G T + Sbjct: 262 DDTLINQLKAYRTWCKKTKLSFGLHL---------QDDDFIFISYQS------GTPITDN 306 Query: 295 SIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKW 354 + + +K L+ + RHT+A ++ IA+++G QM+F +YG Sbjct: 307 PLMYSFQRILKHTTLKKITPHGLRHTHATLLISQRIPVKVIADRLG-NTPQMIFDIYGHS 365 Query: 355 MSENNNAQVALLNTQL 370 E VA +T L Sbjct: 366 FKELEEESVAAFSTSL 381 >UniRef50_C0X6I8 Phage integrase family site specific recombinase n=17 Tax=Enterococcus faecalis RepID=C0X6I8_ENTFA Length = 389 Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 123/357 (34%), Gaps = 36/357 (10%) Query: 24 SSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVI-KNILSIIGEKNL-AS 81 S+ + A DL + +L + + +VA + Y+ + I K + + Sbjct: 57 ESQLAMECECANPDLLFYDYLLNYLEVSKKQVAFNTYVGYKHYVHNRIYKFFYPKKIKLN 116 Query: 82 SINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADN 141 + L + + +L +A TV +Y + Q V ++ N Sbjct: 117 RLKPYHLQDFYQYMLND-------------DCTANTVIHYHAFIRKALQEAVITELISTN 163 Query: 142 PFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDI 201 + K+ + + ++ E ++L+D ++ + ++ + G+R E+ L W I Sbjct: 164 VADKVRKPKKKQFVSQVYNQHEILKLLDILSEEKLYLVVLLTAFYGLRRSEVLGLKWSAI 223 Query: 202 DLKNGTMMIRR-------NLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKE 254 D N ++I N+++ + + R + L++ AL +Q + ++ Sbjct: 224 DFFNKKIVINHVIIENPENMSQLIKKDQTKNSSSYRTLPLVETIERALVNQAKWQQDNRI 283 Query: 255 HIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKS 314 + D ++ + G + IK+ GL+ + Sbjct: 284 LLGD--------------DYILEDNEYVFTMEDGRLMKPQYVTHRLSKLIKKNGLKKIRF 329 Query: 315 YQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + RH+ A L +G N I +GHA +Y + + L Sbjct: 330 HDLRHSNASIMLDSGQNMKSIQEWLGHASYSTTANLYTHLTAGVKDRAAEALENAFG 386 >UniRef50_UPI0001C37419 Phage integrase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37419 Length = 386 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 71/362 (19%), Positives = 135/362 (37%), Gaps = 41/362 (11%) Query: 22 FPSSRNLEKFGEARQDLTIKELAEKFLALKETE-VAKTSLNTYRAVIK-NILSIIGEKNL 79 F R+ + + + +++ ELAE + E + T++ Y + + +I I+G K L Sbjct: 52 FEFERHCKGYAQLNENMRFYELAEWYFENYAPEELKPTTVLNYESQYRNHIAPILGNKKL 111 Query: 80 ASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLA 139 I L E K L + + ++V + ++++ + G+ Sbjct: 112 -KDITTPMLTEFLKVL------------GKEHHLNPISVRKVYIVVQSIYRRALQQGFAR 158 Query: 140 DNPFKGISPLKESRTIPDP-LSREEFIRLIDACRNQQA----KNLWCVSVYTGVRPGELC 194 DNP + + K+ + LS EE R + R++ K + V ++TG+R GE Sbjct: 159 DNPCQNVIIPKKRDSGKRYSLSEEETKRFLHLIRDKPWDEDVKRILIVLLFTGMRIGECL 218 Query: 195 ALGWEDIDLKNGTMMIRRNLA----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTR 250 L WEDID + T+ I L+ K PKT+ + R+I + L Q Sbjct: 219 GLAWEDIDFEKKTIFIHHTLSCVDGKCYLDSPKTK-SSIRLIAMNSTVEKYLNDQQAYVE 277 Query: 251 LSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLR 310 K + + + G++ S+ K Sbjct: 278 QLKMALGNK----------------YAHPEMVFPSGQGNYRDRSSVYHSLKRMTKGTEFE 321 Query: 311 HRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 ++ RH A L +G + I+ +GH D + +Y + + ++ +L Sbjct: 322 DMTLHKLRHCNATLLLNSGVDLKVISEHLGHCDIGVTANIYADVLRKQKIRLADTIDDKL 381 Query: 371 SE 372 S+ Sbjct: 382 SD 383 >UniRef50_C1D584 Phage integrase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D584_LARHH Length = 416 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 93/379 (24%), Positives = 169/379 (44%), Gaps = 54/379 (14%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNL---EKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 R+++ AI+ G F YA FP S+ ++ A+ T+ ++L E + ++L Sbjct: 51 RAAILAAIENGTFVYAVTFPHSKKAVLAKRTPVAKYGKTLDAWMSEWLKRCERYLKSSTL 110 Query: 61 NTYRAV-IKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 + Y+ + + + + G + I + + L S + Sbjct: 111 HDYKTIAWRQLSPVFGNHQIGD-IKRSDIRAWCDGL----------------TCSNKRIA 153 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI---PDPLSREEFIRLIDACRNQQA 176 N ++ A +D+ + NP G + + DP + +E +++A Sbjct: 154 NILSVFRASLTAAMDDELIDTNPLSGWTYRRREEVKEDDIDPFTPDEQTAILEALPEAG- 212 Query: 177 KNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK--DRFTVPKTQAGTNRVIHL 234 N+ + +TG+R EL AL W+DID G + I + L + + PKT+A + R + L Sbjct: 213 CNMIRFAFWTGLRTSELVALEWKDIDWVGGKVSISKALTQRATKAETPKTRA-SRRFVTL 271 Query: 235 IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFT-V 293 ++PA++AL +Q +T + V+ G+ +T Sbjct: 272 LQPALEALMAQKAVTF------------------FSEHGRVWIDP------RTGEPWTGD 307 Query: 294 DSIRQM-WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYG 352 +IR+ W A++RAG+R+R+ YQ+RHT+A L+AG +P ++ANQMGHA M+ +VYG Sbjct: 308 QAIRKTLWTPALRRAGVRYRRPYQTRHTFASMMLSAGESPVWVANQMGHASWTMIARVYG 367 Query: 353 KWMSENNNAQVALLNTQLS 371 +W+ +N S Sbjct: 368 RWIPNGDNGDGQKAVKAFS 386 >UniRef50_A2RHC7 Phage integrase n=3 Tax=root RepID=A2RHC7_LACLM Length = 394 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 61/345 (17%), Positives = 115/345 (33%), Gaps = 33/345 (9%) Query: 40 IKELAEKFLALKETEVAKTSLNTYRAVIKNI-LSIIGEKNLASSINKEKLLEVRKELLTG 98 K++A + + V ++ + + N L +GE + +N L ++ + + Sbjct: 69 FKDIAMLWFDSYKLGVKPRTVQIMQTRLNNYVLPALGEYRI-DKVNSIILQQIVNQWMIN 127 Query: 99 YQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES----RT 154 P + G Y + +F+ + G + DNP + K Sbjct: 128 ASQPLNGAYHRPKG-KGKDFKIYFNIVERIFKHALSLGLVKDNPCVNVIVPKVRLESTEK 186 Query: 155 IPDPLSREEFIRLIDAC--------RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNG 206 L+ E+ + N+ L + V +G+R GE AL W DID K G Sbjct: 187 KVKYLTAEQLKIFFEYIGALPKEKYTNELMTGLCRLLVASGLRIGEAVALSWSDIDFKTG 246 Query: 207 TMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 ++ + + + +NR++ + A++ L+ I Sbjct: 247 SVSVSKTTLRAVIQSTPKTDKSNRIVLIDSKAVEVLKHWELFQAKYFMSIG--------- 297 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL 326 K K VF G ++R ++ L + RH++A L Sbjct: 298 --KGKQELVFPNRT-------GGVLDYQTMRPFLIKWLRACQLPQVGFHGFRHSHASLLL 348 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 A I ++GHA +M Y S+N V + + Sbjct: 349 NADVPYKEIQERLGHASIKMTMDTYSHLESDNKIKAVERFESIAN 393 >UniRef50_C7T893 Phage integrase n=5 Tax=Lactobacillus RepID=C7T893_LACRG Length = 385 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 63/379 (16%), Positives = 132/379 (34%), Gaps = 47/379 (12%) Query: 9 YAIKTGVFDYAKQFPSS-RNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVI 67 + K A + + N + E + + +++ E++ V +++ + Sbjct: 39 FKTKKEATVAAARLELAISNGDLEEEKPKPVFFRDVYEEWYGNYINTVRESTWARTAGMF 98 Query: 68 K-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLN 126 +IL G K +A +I + + + K SA + ++ Sbjct: 99 NNHILPAFGGKRIA-TITTKDVQKAVKRWFEFT--------------SANY-KRWYNYVS 142 Query: 127 AVFQFGVDNGYLADNPFKGISPLKESR----TIPDPLSREEFIRLIDACRNQQAK---NL 179 +V + V GY++ NP K + + ++E+ + + Sbjct: 143 SVMDYAVRQGYMSKNPAKAVVLPHHDDLAGDKPENFWTKEQMNHFFACIDQENHFDVFIM 202 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD-----RFTVPKTQAGTNRVIHL 234 + V +TGVR GEL AL W D+ K ++ + + L + PKT+AG R I + Sbjct: 203 FRVLAFTGVRRGELLALTWNDVSFKENSIKVNKTLTQGDKGHQIVQAPKTRAG-RRTIPV 261 Query: 235 IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVD 294 + L+ + + + F + G Q +F + + +++ Sbjct: 262 DGQTMAYLKRWRRIQQET--------FLQLGINTMQPNQLLFTNTKNG-------YQSLN 306 Query: 295 SIRQMWDAAIKRAGL-RHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGK 353 + + GL + RH++ L AG + +GH D + VY Sbjct: 307 TPSKRLHKLQDDNGLTPRITIHGFRHSFISNLLIAGVPVTSVQKLVGHTDPTITLGVYAH 366 Query: 354 WMSENNNAQVALLNTQLSE 372 ++ + A L + Sbjct: 367 VSAKQESEATAALAKYMQN 385 >UniRef50_C5WEI1 Site-specific recombinase, phage integrase family n=9 Tax=Streptococcus RepID=C5WEI1_STRDG Length = 384 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 71/373 (19%), Positives = 134/373 (35%), Gaps = 39/373 (10%) Query: 9 YAIKTGVFDYAK---QFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRA 65 + + DY +S LE+F + T E+ EK+ + V T+ + Sbjct: 37 FRTRKEAKDYEARLIYLKASGRLEEFIKPTHK-TYNEIFEKWYQAYQDTVEPTTASRTLD 95 Query: 66 VIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTN 124 + + +IL ++G+ + S I+ E ++ + + Sbjct: 96 IFRLHILPVMGDLPI-SKISPLDCQNFITEKAKVFKN----------------IKQIKSY 138 Query: 125 LNAVFQFGVDNGYLADNPFKGISPLKESRTIP-DPLSREEFIRLIDAC---RNQQAKNLW 180 VF F + L NP I K +T + + +E + + L+ Sbjct: 139 TRKVFDFAIKMKLLKHNPMTEIIMPKRKKTRIENYWTVQELQEFLAIVLQEEPYKHYALF 198 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK--DRFTVPKTQAG-TNRVIHLIKP 237 + Y+G+R GEL AL W DID ++ T+ + ++L + + T+ + R I L Sbjct: 199 RLLAYSGLRKGELYALKWADIDFQSETLSVNKSLGRLDGQAIEKSTKNDFSVRKIKLDSE 258 Query: 238 AIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIR 297 I L+ ++ + K + F+F + D I Sbjct: 259 TISILQEWKSINQKEKAQLAVAPLSIKQ-------DFIFT---YCTRTGSIEPLHADYIN 308 Query: 298 QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 + I++ LR + RHT+A + G +P A ++GHA +QM Y + Sbjct: 309 NVLSRIIRKHSLRKISPHGFRHTHATLMIEIGVDPVNTAKRLGHASSQMTLDTYSHSTNN 368 Query: 358 NNNAQVALLNTQL 370 + + L Sbjct: 369 GEDRSIKQFADYL 381 >UniRef50_B2V4P6 Phage integrase family protein n=9 Tax=root RepID=B2V4P6_CLOBA Length = 382 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 64/389 (16%), Positives = 136/389 (34%), Gaps = 44/389 (11%) Query: 4 RSSVCYA---IKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKE-TEVAKTS 59 R + K + + N +++ + + + + Sbjct: 25 RKRIERKGGDTKKEAQQALRMALNEFNNTGSYVNETNMSFSDFLDYWFDEYVMKNCKYNT 84 Query: 60 LNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 TY++ I NL ++ K+ ++ L + + + G S T+ Sbjct: 85 QQTYKSFIN--------INLKPNLGIYKIKQLNYAALQEFLNKQYAH-----GYSKNTLA 131 Query: 120 NYMTNLNAVFQFGVD-NGYLADNPFKGISPLKESR--TIPDPLSREEFIRLI-DACRNQQ 175 + ++ + V ++ NP K ++ + +S E F ++I Sbjct: 132 RLRSIISHSLEMAVSPYQFIKVNPAKNLTLPRFDNIAKENIVISIENFNKIIGRFPCGTS 191 Query: 176 AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR-----NLAKDRFTVPKTQAGTNR 230 ++ TG+R GE+C L W+ +D + T+ I + F+ PKT+ G+ R Sbjct: 192 FYIPLQIAFNTGMRVGEVCGLTWDCVDFEKKTIRIEKILIFKTKQGYEFSTPKTK-GSIR 250 Query: 231 VIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDH 290 I + I+ L++ +K++ + K G Sbjct: 251 TISIGDTLINILKTHKNWQEENKKNYGSY----------------YNDNNFVCTKENGSF 294 Query: 291 FTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQV 350 T+ S+R + ++ + RHT+A L GAN I +++GH+ + Sbjct: 295 VTMTSLRYLSRIINMELQIK-FNFHSLRHTHATMLLEGGANIKDIQDRLGHSKFSTTMDL 353 Query: 351 YGKWMSENNNAQVALLNTQLSEFAPTMPH 379 Y ++ N+ V +L L++ P+ Sbjct: 354 YSHVTAKMQNSTVNILENILNQEVKLPPN 382 >UniRef50_A6NRR1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NRR1_9BACE Length = 377 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 128/351 (36%), Gaps = 32/351 (9%) Query: 24 SSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLNTYRAVIKNILSIIGEKNLASS 82 S + A + LT+ + E ++ E A+T++ YR +I N +L+ + Sbjct: 54 QSELESRQQVAPRALTLDQWLEYWMEQVVEPNRAETTIYGYRKIIDN--------HLSDA 105 Query: 83 INKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNP 142 + + ++ L Y ++ G S TV + L+A V + +P Sbjct: 106 LGDIPVQKLTPRHLQEYYA----MLMRDKGLSPNTVRRHHDLLSAALHTAVRQDIILRSP 161 Query: 143 FKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDID 202 + + P + EE +L + + ++ G+R E+C L W +D Sbjct: 162 TERVEPPRVVPREVGYYGPEELKKLYALAEGTGLELVVKLAGMLGLRREEICGLQWSSVD 221 Query: 203 LKNGTMMI--RRNLAKDRFTVPKTQA-GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDV 259 + I R A +T+ + RV+H+ + LR + ++ + D Sbjct: 222 FAQRRIHICAARTAAGGEIIQKETKNRSSTRVLHMSDELVRLLRRERAGQAENRLALGDK 281 Query: 260 HFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRH 319 ++ V + G + +++ + I+R L + RH Sbjct: 282 ----------------WEDSGLVAVDHMGHPLSPNAVSLAFTRFIRRNNLPKITLHGLRH 325 Query: 320 TYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 T+A + GA I +GH+ ++Y + +N+ A + + L Sbjct: 326 TFATVASAQGAPLFDIGKALGHSTPATTGRIYTHLLDQNHEATLDRVAAAL 376 >UniRef50_B7AAK4 Integrase family protein n=3 Tax=Thermus aquaticus Y51MC23 RepID=B7AAK4_THEAQ Length = 416 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 83/382 (21%), Positives = 143/382 (37%), Gaps = 48/382 (12%) Query: 6 SVCYAIKTGV-FDYAKQFPSSRNLEKFGE------------ARQDLTIKELAEKFLALKE 52 +V + KTG + FP+ R E + + + +T+++ A+ +L K Sbjct: 26 TVGHDPKTGRPKKLTRSFPTKREAEAWRQEMALKHFRGLLAPPEAITVRDFAQSWLERKA 85 Query: 53 TEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPG 112 EV +L YR + L + + + + +L V + N G Sbjct: 86 REVRPRTLFLYREELAYALPSLEDPQAKDPLGRARLQAVNPRDIRAVIDGLLN-----RG 140 Query: 113 RSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISP---LKESRTIP-DPLSREEFIRLI 168 S TV LNA+F+ + +A NP + L++ R P L E L+ Sbjct: 141 LSLRTVKKVREKLNAIFEEALALELVARNPVAPVKVRGGLEQEREKPGRTLETWEIEALL 200 Query: 169 DACR---NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA----KDRFTV 221 A + + + + + G+R GE L WEDIDL+ G + +RR + + + Sbjct: 201 AALDAHPDPRTALVLRLCLSCGLRKGEALGLQWEDIDLEKGLLYVRRTWSFDGARTAISD 260 Query: 222 PKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVS 281 PKT +G R + + + L S +RE + +VF Sbjct: 261 PKTASG-RRAVPIPSKTLARLESYREW------------WRERLGSYPPPSFWVFPGVNG 307 Query: 282 ARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGH 341 + ++ + +KR GL + + RHTY L GA ++ +MGH Sbjct: 308 Q------EPLGYNTPNRALTRILKRLGLPPARVHDLRHTYGSMLLARGAPVELVSERMGH 361 Query: 342 ADAQMVFQVYGKWMSENNNAQV 363 + F Y SE A + Sbjct: 362 TSPSITFNNYRHMFSEERQAHI 383 >UniRef50_Q31DR3 Tyrosine recombinase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31DR3_THICR Length = 433 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 92/384 (23%), Positives = 156/384 (40%), Gaps = 50/384 (13%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEAR--------QDLTIKELAEKFLALKETE 54 + + I G F+Y K FP+S L K +A + K+ E++ + E Sbjct: 43 ILERINAEITLGTFEYGKYFPNSSMLAKIEKATAKLVPGYTKTPLFKDFVEEWFSEMEPT 102 Query: 55 VAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGR 113 K + + YR+ + K ++ GE ++S I K ++L+ R + + Sbjct: 103 WRKATADGYRSYLDKRLIPHFGEMEVSS-ITKAEILKYRAHVAKQ----------SAGKL 151 Query: 114 SAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRN 173 + T+N ++ LN V + Y P I PLKE + DP S EE +++ R+ Sbjct: 152 KSKTINKFIKCLNMVMNEAA-DRYDFTPPHLNIKPLKEEKVHIDPFSIEEVNQILAQVRS 210 Query: 174 QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIH 233 ++ V +TG+R GE+ L WE +D ++IR + R+ K G+ R I Sbjct: 211 D-WRDYLLVRFFTGMRTGEIDGLKWEHVDFSRREILIRETYSAGRWEYTK-NDGSQREIE 268 Query: 234 LIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFT- 292 + + L + K VF G Sbjct: 269 MSTLVYNTLSKRFKERDP-------------------KSELVF-------CTGNGAPVHT 302 Query: 293 VDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYG 352 + +R++W + L++RK YQ+RHT A L AG NP +IA QMGH+ M+F VY Sbjct: 303 PNFLRRVWRPLLSYLKLKYRKPYQTRHTAATIWLAAGENPNWIAKQMGHSTTSMLFTVYA 362 Query: 353 KWMSENNNAQVALLNTQLSEFAPT 376 +++ + + L+ Sbjct: 363 RYVPNLTRKDGSAMERLLASNIDG 386 >UniRef50_B9KYK7 Putative integrase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYK7_THERP Length = 359 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 77/374 (20%), Positives = 138/374 (36%), Gaps = 43/374 (11%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 R SV +T V + + +T++EL E++LA + + Y Sbjct: 22 RFSVYGRTETEVRQKLAELER-KLAIDQAPPVGRVTVRELCERWLATERKRWKPKTYYDY 80 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 R +++ ++ + + +L ++ + L + S + N Sbjct: 81 RWHLEH--------HVYPVLGRVQLSKLTPDRLQRFFDS----------LSGRSANLTFR 122 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC--RNQQAKNLWC 181 L+ F G+ G+L NP + P + + RL C + L Sbjct: 123 LLHRCFVVGIRWGFLGQNPCDRVVPPAYQAPPIELPDADALARLFRYCLESDDPYAGLVG 182 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA----KDRFTVPKTQAGTNRVIHLIKP 237 +S+ G+R GE+ AL W DIDL+ G + + R+ + T PKT+AG R I++ + Sbjct: 183 LSLLCGLRRGEITALRWSDIDLQTGQLSVVRSGQWIAGRWVETEPKTRAG-RRTIYVGEQ 241 Query: 238 AIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIR 297 I LR Q L K Q+ VF G + + Sbjct: 242 GIRLLRRQKALVAQLKLQAGPA---------WQEHGLVFPG-------PNGQPLSPSRVA 285 Query: 298 QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 K +G+ + + RH A +L AG ++ Q+GHA+ + +VY +S+ Sbjct: 286 AAVQRICKASGVPPLRHHSLRHASASLALLAGVPLPEVSRQLGHANVSITARVYSHCISD 345 Query: 358 NNNAQVALLNTQLS 371 + L+ Sbjct: 346 G-RRVTEAIERVLA 358 >UniRef50_UPI0001C375E4 hypothetical protein RflaF_02473 n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C375E4 Length = 399 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 123/358 (34%), Gaps = 29/358 (8%) Query: 32 GEARQDLTIKELAEKFLALK-ETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLE 90 G+ ++ ++ AE++ + + TS + + + IG L I + + Sbjct: 61 GQVTANIKFQDFAEQWFEEYAKLNLRNTSYERMKQLTVRVYPAIGHLRL-DKITSRHIQQ 119 Query: 91 VRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK 150 +L + S T ++++ ++ VF + V L DNP K ++ K Sbjct: 120 FINDLA-----LNGKSLKNGRPLSRKTAVHHLSFISDVFSYAVKMEMLTDNPCKRVTVPK 174 Query: 151 ESRTIPDPLSREEFIRLIDACR--NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTM 208 + D + EE L + + + +++Y+G R GE+ L W+DID ++ + Sbjct: 175 GEKKEKDIYTLEEVAHLFQLLETAPLKYRVFFTLAIYSGFRRGEMLGLEWKDIDWEHNVI 234 Query: 209 MIRRN----LAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY 264 +RR +K +T + R + + +D LR + + Sbjct: 235 SVRRTSNYTASKGIYTDTTKTKKSQRSLKFPQSVMDLLREYKAEQDEERVKLGTK----- 289 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACW 324 +Q VK G ++ + R + RH YA Sbjct: 290 -----------WQDYDRLFVKWDGRPMNNNTPYFWLKEFCEENNFRFCDIHSLRHFYASA 338 Query: 325 SLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNEA 382 + G + A ++ +GH+ +Y ++ + + L + Sbjct: 339 LINEGVDAATVSGALGHSTITTTTSIYCHVFNQAQARAGDAIASVLDFKKHDTGKGQT 396 >UniRef50_C1SH90 Site-specific recombinase XerD n=2 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SH90_9BACT Length = 399 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 92/356 (25%), Positives = 150/356 (42%), Gaps = 50/356 (14%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEA--RQDLTIKELAEKFLALKETEVAKTSL 60 L S + I F Y FP S+ + + + D+ AE +L+ E+ VA ++ Sbjct: 50 LLSEIERKIAEKTFKYETYFPDSKYVRENQQLHLNSDMFFDTYAELWLSSIESSVAYSTY 109 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 TY + L+S ++ KL E++ + Y SA T+ N Sbjct: 110 KTYSTAVS---------KLSSYFSRFKLSEIKPSHIQQYISNSE--------LSAKTIAN 152 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQ--QAKN 178 Y+ +++F+ V + L+ NP K + + DP S EE ++D R Sbjct: 153 YLGVFHSIFESAVRDDLLSKNPCKHVKKPRVQTEKVDPFSIEEVSMILDWMRQHHPHMTI 212 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPA 238 ++ + YTG+R GE AL W DID K+ ++++R + K+R T+ RVI +I Sbjct: 213 IFALGFYTGMRVGEAIALKWSDIDFKHHKIIVQRTITKNRIKES-TKTADYRVIDIIPML 271 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFT-VDSIR 297 + L Q + F V +YG+ FT +I Sbjct: 272 DEYLHFQK--------------------------QYTFMKSEWVTVTSYGEPFTKTQNIT 305 Query: 298 -QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYG 352 + +K GLR+R Q RH++AC L A +I N +GH+ QM+F+ YG Sbjct: 306 EDYFKPCLKALGLRYRILNQMRHSFACMMLDAREEINWIKNMLGHSSLQMLFRKYG 361 >UniRef50_Q24ZE5 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24ZE5_DESHY Length = 308 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 110/318 (34%), Gaps = 37/318 (11%) Query: 70 ILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVF 129 IL +G L S + L++ K L S ++ Y L+++ Sbjct: 6 ILPQLGNLKL-SDLRPGHLMKFYKYLEQDGIRQDGKP----GKLSDRSIRYYHAVLSSML 60 Query: 130 QFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQ--AKNLWCVSVYTG 187 + + + NP + K R + L+ A ++ + L +++YTG Sbjct: 61 EDAMKWQLITSNPAARVEAPKVRRKQTTSYDETQSAELLQALYSEPIKYRVLTTLALYTG 120 Query: 188 VRPGELCALGWEDIDLKNGTMMIRRNLAKD---RFTVPKTQA-GTNRVIHLIKPAIDALR 243 +R GEL L W+ ID++N + + + KT+ G+ R+I + + L+ Sbjct: 121 LRRGELLGLEWKVIDMENAQIAVVKQSQYTPETGVVDRKTKTEGSQRLISIPTSIVTLLK 180 Query: 244 SQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAA 303 + + ++QP G D++ ++ Sbjct: 181 EYKAAQNEERLKVGS----------------LWQPSDKLFTTWNGKPMHPDTVSSWFNDF 224 Query: 304 IKRAG----------LRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGK 353 + R L H + + RHT A + G +++++GH+ + +Y Sbjct: 225 LTRYNEKTIQQGKASLPHIRFHDLRHTSASLLIAQGVPLKNVSSRLGHSSIAITADIYAS 284 Query: 354 WMSENNNAQVALLNTQLS 371 + + L L+ Sbjct: 285 ALQSADKEAAQKLEDILN 302 >UniRef50_Q12GK7 Phage integrase n=11 Tax=Proteobacteria RepID=Q12GK7_POLSJ Length = 471 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 89/386 (23%), Positives = 156/386 (40%), Gaps = 56/386 (14%) Query: 7 VCYAIKTGVFDYAKQF--------PSSRNLEKFGEARQD----------LTIKELAEKFL 48 + I G FDY K F P +++ AR D E A+++ Sbjct: 47 IETDIALGTFDYEKTFGKPLPQPEPKTKDGSVDRTARSDGLPVLSRNGTPLFGEFAQQWF 106 Query: 49 ALKETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYI 107 E ++ T + + K +L G+K + I K +L R L K Sbjct: 107 TEVEVSWRRSYRITQKGALDKYLLPFFGDKEVG-HITKADVLAFRASLA------KVTTR 159 Query: 108 VTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRL 167 +Q S VN M L + + + ++ F+ I PLK R+ P + +E + Sbjct: 160 KSQGTLSNRRVNAVMKPLRQILNEAA-DRFEFNSAFRNIKPLKMKRSDVQPFTLDEVELI 218 Query: 168 IDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAG 227 ++ R +N + V +TG+R GE L W+ +D + +++R ++ + KT G Sbjct: 219 LNTVRVD-YRNYFNVRFFTGMRTGEAHGLKWKYVDFERRLILVRESIVLNEEDELKTD-G 276 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 + R IH+ + DAL++Q E +VF Sbjct: 277 SVRDIHMSQVVYDALKAQYQAAGEFSE-------------------YVFCSRS------- 310 Query: 288 GDHFTVDSI-RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 G + ++W+ ++ GL HR++YQ RHT A L +G P +IA Q+GH +M Sbjct: 311 GQPINNQNFLNRVWNPLLRHLGLEHRRAYQMRHTAATLWLASGEAPEWIARQLGHTSTEM 370 Query: 347 VFQVYGKWMSENNNAQVALLNTQLSE 372 +F+VY +++ + + L+ Sbjct: 371 LFRVYSRYVPNLTRQDGSAMERLLAS 396 >UniRef50_A1UH53 Phage integrase family protein n=3 Tax=root RepID=A1UH53_MYCSK Length = 379 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 71/377 (18%), Positives = 134/377 (35%), Gaps = 36/377 (9%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLA--LKETEVAKT 58 G SV A K+ + + T+ +++ A L ++ +T Sbjct: 32 GRKSVSVYAATAAECRKELKKVRDRIEGGAPAKDAPN-TVSSWLKQWRASSLAASDRKET 90 Query: 59 SLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 + + Y + + L + I ++L ++ + + + S TV Sbjct: 91 TKSLYATLSRKHLE-------GARIGDKRLDRLKPSDVELLIVQ-----LRGKNLSDSTV 138 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKN 178 T L V +G LA NP + +R L + RL+DA + + Sbjct: 139 RQVYTVLRQALDVAVRDGLLAANPASKVKRPGVARKEAKYLPAADVARLLDAAKGLRYYL 198 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD----RFTVPKTQAGTNRVIHL 234 + TG+R GE+ L W D+DL+ G + +R L++ T PKT + R + L Sbjct: 199 GVVLMATTGLRRGEVAGLLWSDVDLEKGELTVRHTLSRVDGKLVLTEPKTD-RSRRRVPL 257 Query: 235 IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVD 294 + L+ T + D ++ + +G Sbjct: 258 HAGVVAQLKMHRTQQLQERLAAGDQ----------------WRDTGAVLATEFGTLLDPR 301 Query: 295 SIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKW 354 ++ + + A + G+ ++ RH+ A L +G + A+ +GH+ + +YG Sbjct: 302 NLLRTVEIAAAKVGIEDVGAHTMRHSAAVAWLESGVHIKAAADLLGHSSIAITGDLYGHT 361 Query: 355 MSENNNAQVALLNTQLS 371 E A V L T L Sbjct: 362 SDETARAAVDGLGTALG 378 >UniRef50_C1XUI9 Site-specific recombinase XerD n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XUI9_9DEIN Length = 385 Score = 253 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 69/382 (18%), Positives = 122/382 (31%), Gaps = 39/382 (10%) Query: 6 SVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRA 65 SV A+ + E+ R T A +L K EV + YR Sbjct: 32 SVYAQTAAEAERKARDLKT--RAERGQFTRDRSTTAGYARLWLERKAKEVRPRTAELYRL 89 Query: 66 VIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNL 125 + L + + ++ L EV+ + S S TV L Sbjct: 90 ELSYALPSLQDPEAPDALGSRPLQEVKPAHIREVLDGLSKR------YSIRTVKMVRQRL 143 Query: 126 NAVFQFGVDNGYLADNPFK--GISPLKESRTIP--DPLSREEFIRLIDAC---RNQQAKN 178 VF+ +D + NP I + L E L+ A ++ + Sbjct: 144 WQVFRDALDMELIYRNPVDPVRIKTPRGQSKAKVGRALEPHEIAALLSALDQHKDPRTAL 203 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA----KDRFTVPKTQAGTNRVIHL 234 + + G+R GE L W+D+DL GT+ + R + T+PKT + R + + Sbjct: 204 ALRLMLACGLRRGEALGLQWQDLDLGAGTLTVTRAWTDDGKRGVLTLPKTHT-SGRTVPI 262 Query: 235 IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVD 294 ++ L+ + + + +VF + Sbjct: 263 PHATLERLQQYRA-------------WYAERLGDPRPEAWVFPGNDPS------KPLNPH 303 Query: 295 SIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKW 354 + +R G+ + + RH+Y L GA ++ +MGHA+A + VY Sbjct: 304 APNWALKRITERLGIGPLRVHDLRHSYGSHMLANGAPLELVSERMGHANANITLGVYRHV 363 Query: 355 MSENNNAQVALLNTQLSEFAPT 376 + + L A Sbjct: 364 LEHERKGWIIDPEDLLGPRAKA 385 >UniRef50_A0JQA1 Phage integrase n=2 Tax=Lactobacillales RepID=A0JQA1_LACS1 Length = 381 Score = 253 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 140/385 (36%), Gaps = 50/385 (12%) Query: 5 SSVCYAIKTGVFDYAKQFPSSRNLEKFGEAR-----QDLTIKELAEKFLALKETEVAKTS 59 Y K G + + ++ +EK +++T E+ ++++ + V ++S Sbjct: 28 GKRKYKTKGGFYTKKEAKLAADEIEKKISNPTFLDNENITFGEVYDRWIVNYKLTVKESS 87 Query: 60 LNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 T K IL I+G K + + I + ++ Y IP NY Sbjct: 88 FYTVELQYKSKILPILGNKKI-NQITTIECQDLINY---WYSIPLKNY------------ 131 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRT------IPDPLSREEFIRLIDACR 172 + +F++ + D+P + K SR + +R+E ++ Sbjct: 132 KAIFNLITRIFKYAKQLKIVTDDPTSSVIIPKASRQFNNLEHSRNYYTRDELKTFLEYAE 191 Query: 173 NQ---QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL---AKDRFTVPKTQA 226 + L+ + ++G+R E AL W DID + + I + + +K + T PKT+ Sbjct: 192 KHEKHKIYVLFRLLAFSGMRKSEALALTWNDIDFEKAQITINKTIILVSKVKVTTPKTK- 250 Query: 227 GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKN 286 +NR + + K + LR + + G VF Sbjct: 251 SSNRTVFIDKKTVSILREWRLSQKKE--------LLQKGFNALSPNQLVFPD-------K 295 Query: 287 YGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 + +I +M + + + L H + RHTYA + G + + Q+GH+ ++ Sbjct: 296 NNHYIIPTTISKMMNRVSEGSNLHHITVHGLRHTYATLAAQGGMSVKQLQAQLGHSKVEI 355 Query: 347 VFQVYGKWMSENNNAQVALLNTQLS 371 VY E + ++ Sbjct: 356 TLDVYTSITDEQRKDTANQYTSFVN 380 >UniRef50_Q38Y39 Site-specific recombinase, prophage lsa1 integrase n=3 Tax=Lactobacillus RepID=Q38Y39_LACSS Length = 385 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 61/359 (16%), Positives = 135/359 (37%), Gaps = 48/359 (13%) Query: 29 EKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEK 87 + + +LT +++ +++ A V ++++ + V +IL G+ + +I + Sbjct: 58 GQLDQQPINLTFEDVYQQWWAGYINTVRESTMYKQKKVFQNHILPAFGKYRI-RTITTSQ 116 Query: 88 LLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS 147 + + + + +A+F++ + GY+ DNP ++ Sbjct: 117 VQTTLNKWFKQTDY---------------SFKPWFNYTSAIFKYAILQGYIKDNPCTRVT 161 Query: 148 PLKESRTI--PDPLSREEFIRLIDACR---NQQAKNLWCVSVYTGVRPGELCALGWEDID 202 K+ + +++ + + + L+ V +TG+R GE +L W+D++ Sbjct: 162 MPKKLDKEDTLNFWDKDQLKTFFNGIDPVNDLEKYTLFRVLAFTGIRRGECLSLTWDDLN 221 Query: 203 LKNGTMMIRRNLAKDR-----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHII 257 ++ T+ I + L KT+ GT RVI L + + L+ R Sbjct: 222 VQKATLDINKTLTHGDKGRLLIQPTKTKKGT-RVISLDESTLLYLKKWHLEQRR------ 274 Query: 258 DVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAG-----LRHR 312 + G + +F + ++++ + A I A L Sbjct: 275 --MYLMLGYNINKSNQLIFATSKNTFK-------SLNTPSKWLRALIDDANKSGANLPSI 325 Query: 313 KSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + RH++A +AGA+ + ++GH DAQ +Y + V L L+ Sbjct: 326 TVHGFRHSHASALFSAGASIKEVQERLGHEDAQTTLNIYTHVTEKQGQEAVQKLVNFLN 384 >UniRef50_C5WGZ4 Integrase n=18 Tax=root RepID=C5WGZ4_STRDG Length = 362 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 118/355 (33%), Gaps = 56/355 (15%) Query: 28 LEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEK 87 + + + +T L +++L E V ++ I K++ ++K K Sbjct: 50 QAELDKPKSSMTFGALTDQWLKEYEKTVQGSTYLKTERNIN--------KHILPKLDKVK 101 Query: 88 LLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS 147 + ++ L+ N + + + + V GY+ +NP I+ Sbjct: 102 IGDINPLLIQRLTEEWCNDLKYGG--------KILGLVRNILNLAVRYGYINNNPALPIT 153 Query: 148 PLKESRTIP---DPLSREEFIRLIDACRNQQAK---NLWCVSVYTGVRPGELCALGWEDI 201 P K R + + ++ + ++ L+ + +TG+R GEL AL W+ Sbjct: 154 PPKIKRKRKMNNNFYTLDQLKQFLELVEKTDNIEKIALFRLLAFTGIRKGELLALTWD-- 211 Query: 202 DLKNGTMMIRRNLAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHII 257 DL T+ I + + + V KT+ ++R+I L ++ L Sbjct: 212 DLNGNTLSINKAVTRTQVGLEIDVTKTK-SSDRLISLDDETLEILLELRET--------- 261 Query: 258 DVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQS 317 F G T R+ IK L + Sbjct: 262 ------------------FPTSTLMFQSESGGIMTPSLPRKWLLQIIKGTDLPQITIHGF 303 Query: 318 RHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 RHT+A +G + + +++GH D Q VY + N ++ Sbjct: 304 RHTHASLLFESGLSLKQVQHRLGHGDLQTTMNVYTHITQSAIDDIGTKFNEFVTN 358 >UniRef50_B2UXR9 Phage integrase n=3 Tax=Clostridium RepID=B2UXR9_CLOBA Length = 389 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 67/389 (17%), Positives = 141/389 (36%), Gaps = 59/389 (15%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFL-ALKETEVAKTSLNT 62 R+ K +Y L+ ++ ++ + ++L +K E+ ++ Sbjct: 35 RTEKELKAKIKKLNYE--------LDHNIQSNKN-SFGVFFSEWLFDIKFMEIKPSTKIK 85 Query: 63 YRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 Y V +N + S I+ K+ E+ + + Y + + G+S V Sbjct: 86 YETVYRNHIK-------NSEISDIKIKELTSKDIQIYYNN-----LIKKGKSTTLVKTIH 133 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKESRTI-------PDPLSREEFIRLIDACRNQQ 175 + ++ +N ++ + + KE+ P + EE I A + + Sbjct: 134 KLIAPCIKYAYNNDFIIKDFTGSLIIPKETEKDKLNKESSVIPFTLEEQKEFIKAIKGNK 193 Query: 176 AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL-------------AKDRFTVP 222 + L+ ++ +G+R GEL AL W DI+LK + + +NL +K P Sbjct: 194 FEALFITALNSGLREGELLALTWNDINLKEKYINVNKNLGVVTEVSKDGRGVSKLEVQTP 253 Query: 223 KTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSA 282 KT+ G R + + I L+ ++ + + + Sbjct: 254 KTRKGK-RQVSIPNFLITVLKEYKKQQSKNRLKLANK----------------YTNNNLI 296 Query: 283 RVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHA 342 YG++ D + + +K + ++ RK + RHTYA G + +GH+ Sbjct: 297 FCDEYGNYLNRDKVTYQYKKLLKESKIKTRKFHDLRHTYATRLFELGEQARTVQELLGHS 356 Query: 343 DAQMVFQVYGKWMSENNNAQVALLNTQLS 371 D + Y + + V+ L+ + Sbjct: 357 DVSVTLNTYTHVLDDMKEKAVSKLDNLFN 385 >UniRef50_B0MMM2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MMM2_9FIRM Length = 398 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 59/369 (15%), Positives = 127/369 (34%), Gaps = 40/369 (10%) Query: 20 KQFPSS--RNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGE 76 + F S + + + D+ I + + E + K++ +YR +I I Sbjct: 57 QAFEQSYAEQIAQNKKPASDIPIYDYMCAYYKKIEKNIQKSTAESYRGMINGRIRRYFTA 116 Query: 77 KN--LASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVD 134 + SI + + + + + + A TV +Y T L++ F+ Sbjct: 117 RKDLTVGSITAKDIEDFYDWMFESHVV-------------ANTVIHYHTVLHSAFKRAFK 163 Query: 135 NGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELC 194 +G + NPF I K+++ D S EE I ++ R ++ G+R E Sbjct: 164 DGLIESNPFDRIDRPKKNKFTGDNYSEEELIAMLGLIRGDIIYPAVMLAGGLGLRRSEAL 223 Query: 195 ALGWEDIDLKNGTMMIRRNLAKDRFT--------VPKTQAGTNRVIHLIKPAIDALRSQM 246 W +D + T+++ + + + + R + L P + L + Sbjct: 224 GARWSRVDWEKKTILLDTKIIEYKENGKVIVEPVEEMKNKSSRRTLPLPDPVYEMLCEER 283 Query: 247 TLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKR 306 L + + R+Y + V G + + Q + I++ Sbjct: 284 EKQDLYRRMFKGSYNRKY--------------DDYICVDQLGGLIRPNRVTQRFADLIRQ 329 Query: 307 AGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALL 366 GLR + + RHT+A + ++ +GH+D +Y ++ Sbjct: 330 YGLRKIRFHDLRHTFASILINQDVPLLNVSTFLGHSDLSTTANIYAHLDKSKKQESADVI 389 Query: 367 NTQLSEFAP 375 + ++ Sbjct: 390 SNIFNKAKE 398 >UniRef50_Q0REL9 Integrase (Recombinase) n=2 Tax=Frankia RepID=Q0REL9_FRAAA Length = 442 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 73/405 (18%), Positives = 134/405 (33%), Gaps = 59/405 (14%) Query: 2 ELRSSVCYAIKTGVFDYAKQF-PSSRNLEKFGEARQDLTIKELAEKFLALKE-TEVAKTS 59 R + +T V + + + K + LT+ + +L +V ++ Sbjct: 53 RQRKYLSGKTRTEVAEKLRTLHRQQEDGVKVVTGNKPLTVDQWLTFWLDTIASRKVRPST 112 Query: 60 LNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 L TYR ++N + + +L + E L + G + TV Sbjct: 113 LATYRGYVRN--------RIVPELGGYRLDRLEPEHLESFYAA-----CESDGLAPATVL 159 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNL 179 ++ + G +A N + R PLS +E ++D + + Sbjct: 160 QMHRIISRALKIAHRRGKVARNVATLVDAPTVQRDEVSPLSAKEARAVLDTAKGGRNPAR 219 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKN--GTMMIRRNLAKD-------------------- 217 W V++ G+R GE L W +DL + T+ +R+ L + Sbjct: 220 WSVALALGLRQGEALGLPWNAVDLDSTPATLTVRQALQRRAWAHGCTDPKSCGLARRCPQ 279 Query: 218 ------RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 PK++AG R I L LR+ + + E E G + + Sbjct: 280 RTGGGLVIVHPKSRAG-RRTIVLPAGLAADLRAHRSAQQQEAE--------EAGTGWRNE 330 Query: 272 CTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGAN 331 VF + G + + W +K AG+R + + +RHT A L + Sbjct: 331 HGLVFT-------QPTGHPIDPSADHRAWKNLLKAAGVRAARLHDARHTMASLLLAQKVH 383 Query: 332 PAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPT 376 P + MGH+ + Y E + + L + Sbjct: 384 PRVVMEIMGHSQISLTLGTYSHVAPELSTDAANQMGATLWDPEND 428 >UniRef50_C6LG06 Prophage LambdaBa02, site-specific recombinase, phage integrase family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LG06_9FIRM Length = 429 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 78/415 (18%), Positives = 145/415 (34%), Gaps = 66/415 (15%) Query: 8 CYAIKTGVFD-YAKQFPSSRNL------EKFGEARQDLTIKELAEKFLALK-ETEVAKTS 59 I G F A+ + + ++++ + + ++ + + + Sbjct: 26 RNRITKGGFRTKAEALEAGNKALVQYNSAGQSFSPSEISVADYLDYWMDNYCKMNLKYNT 85 Query: 60 LNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 Y +I ++ G+ L +I+ + E L G + TV Sbjct: 86 QLGYLNIIENHLKPKFGQYRLC-AISAAPIQEYVNHL-------------KTQGYAKSTV 131 Query: 119 NNYMTNLNAVFQFGVD-NGYLADNPFKGISPLKESRTIPD---PLSREEFIRLIDACR-N 173 + ++ L+ F + V+ YL NP I K T + +S E+F R+I Sbjct: 132 SGIISTLSGAFNYAVEPMHYLQYNPCNNIRYPKFRDTKTEARYIISPEDFQRIIARFDSR 191 Query: 174 QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR-NLAKDR-------------- 218 Q + YTG+R E AL W+DIDL N T+ + + L ++ Sbjct: 192 SQYYLPLMIGYYTGLRISEAFALTWDDIDLDNRTLSVNKITLKRNYGVDVRTVLQNKGKK 251 Query: 219 -------FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK-Q 270 F PKT AG+ R I AL+ ++ H + + Y + EK + Sbjct: 252 EEKSAWYFGTPKT-AGSERTIKFGDALYHALKYAKKTQLENRLHYGEYYTDIYLKPEKDE 310 Query: 271 KCTFVF-------------QPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQS 317 K +F V+ G + + DS + + + Sbjct: 311 KGDEIFRLIETERSIPCALNRANMICVRENGQYVSTDSFKYCARVIHYDLKIA-FNYHSL 369 Query: 318 RHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 RHT+A + GA+ + ++GH + Q Q Y ++ V + +S+ Sbjct: 370 RHTHATTLIENGADIKDVQERLGHDNIQTTMQTYVHNTDTMSSRSVDIFEQAVSQ 424 >UniRef50_B0ABY5 Putative uncharacterized protein n=3 Tax=Clostridium RepID=B0ABY5_9CLOT Length = 370 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 125/341 (36%), Gaps = 37/341 (10%) Query: 34 ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 A D+ +++ FL + ++ T+ N Y + K K + + KL +++ Sbjct: 59 APNDMKLEKYLMDFLEKYKPNLSITTYNCYIRICK--------KYINPMLGNIKLNDLKP 110 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 + Y S T+ ++ LN + + + I K + Sbjct: 111 IHIQNYVDDLVGI------LSPQTIKIHINILNLALKRAYKLKLVKYDIVDCIEVPKNKK 164 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 + +++ +L++ +N + +++ G+R E+ L W DID T+ I + Sbjct: 165 FKSEVYDQKDIAKLLETIKNTDLELPINLAIGLGLRISEVLGLSWSDIDFTENTITIEKI 224 Query: 214 LAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 A+D PKT + R I K + L+ + ++ + + Sbjct: 225 TARDSGKVILKEPKTDT-SKRTISAPKEVMAMLKDYKRK-----------YLQDKLQGKI 272 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG 329 + C +F + D + + + +K+ L+H + + RH++ + A Sbjct: 273 KDCNLLFLD-------KNENPIAEDVLSKKFSRFLKKHNLKHIRFHDLRHSHVTLLINAK 325 Query: 330 ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 I+ ++GH++ +Y + E + ++ + Sbjct: 326 VPIKVISERVGHSNVNTTLNIYSHTLKEMDQEASEKISESI 366 >UniRef50_Q65EQ4 Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core n=15 Tax=Bacillus RepID=Q65EQ4_BACLD Length = 364 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 66/341 (19%), Positives = 127/341 (37%), Gaps = 44/341 (12%) Query: 32 GEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLE 90 GE + T + +A+++L + +S ++I +++ G K + ++I ++ Sbjct: 55 GENEDNPTFEFVAKEYLKWYKKRRKASSYLKTSSIINTHLIPRFGSKKI-NNIRSRDIMR 113 Query: 91 VRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK 150 + +LL Y + V L+AVF F + Y DNP + + Sbjct: 114 FQNDLLDRYAVAH--------------VKKIHQVLSAVFNFAIKQEYTKDNPARLAGNVD 159 Query: 151 -ESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMM 209 E + + +EF I +Q L+ Y+G+R GEL AL W DID + T+ Sbjct: 160 IEEDKHINYWTLDEFKAFIQHVDDQLYYALFMTLYYSGMRKGELLALTWGDIDFDSNTIN 219 Query: 210 IRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEK 269 I + + T PKT + R I + K + L T+ Sbjct: 220 IDKTVYNRIVTKPKT-TSSIRKIMMPKHVMRLLAQLKAKTK------------------- 259 Query: 270 QKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG 329 + DH + ++ + + +K A ++ + + RH++A + + Sbjct: 260 -------TKMTYVVFGEFHDHISTTTLDRKYAEYVKAAKVKKIRLHDFRHSHASYLINRN 312 Query: 330 ANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 P+ +A ++GH D +Y V + Sbjct: 313 TIPSVVAKRLGHKDVGTTLNIYSHLYPSTEKEAVLKMEDDF 353 >UniRef50_Q88UJ5 Prophage Lp3 protein 1, integrase n=1 Tax=Lactobacillus plantarum RepID=Q88UJ5_LACPL Length = 385 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 134/378 (35%), Gaps = 47/378 (12%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK 68 + K + + K++ + + + V +++ T + + + Sbjct: 39 FKTKKEAQIVLSRLELDIYNHGLPTKNDNTIFKDIYQLWFTQYKQTVKESTWVTTQRLFR 98 Query: 69 -NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNA 127 +IL I + +A K + + +K + + + Y + M + Sbjct: 99 LHILPIFSDYRIA----KISIKDCQKAINQWFNAGLAKY------------HTLMNYVAK 142 Query: 128 VFQFGVDNGYLADNPFKGISPL-----KESRTIPDPLSREEFIRLIDACRNQQAKN---- 178 V + ++ +++NP K + + + + + + E + + Sbjct: 143 VLDYAINIDLISENPAKRVIVPVNKNDRSRKNLENYFDKAELQHFFECLTDDDNTPQASV 202 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR-----FTVPKTQAGTNRVIH 233 + ++ +TG+R E+ L W DID N T+ + + ++ PKT A +NR ++ Sbjct: 203 FFRLAAFTGMRKSEMLCLEWSDIDFSNHTIRVNKTQSRGDGARLLVQAPKT-ARSNRTVY 261 Query: 234 LIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV 293 L I L+ + +G Q +VF + F Sbjct: 262 LDPTTIKILQHWQVDQKK--------WLLRFGFNINQGNHYVFAN-------ENNEMFQP 306 Query: 294 DSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGK 353 R+ + + + L+H + RHTYA + A A+ + +Q+GH+ + +Y Sbjct: 307 SKPRKWLEHTLTKYDLKHVTVHAFRHTYATLAFEAHASIKSVQDQLGHSSYRTTLDIYTA 366 Query: 354 WMSENNNAQVALLNTQLS 371 ++ N L L+ Sbjct: 367 VTAKQKNEATEKLANYLN 384 >UniRef50_B2TMD1 Prophage LambdaBa04, site-specific recombinase, phage integrase family n=3 Tax=Clostridium RepID=B2TMD1_CLOBB Length = 386 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 119/349 (34%), Gaps = 33/349 (9%) Query: 34 ARQDLTIKELAEKFLALK-ETEVAKTSLNTYRAVIKNIL-SIIGEKNLASSINKEKLLEV 91 +++ +K+ + +L + ++ + Y+ + + +G L + + + Sbjct: 55 KPKEILLKDYLKIWLEDYVKPNNSENTYIKYKGTVNKYINPQLGLIKLCD-LKVINIEQF 113 Query: 92 RKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE 151 +L + S T+ + LN + L DNP K + K Sbjct: 114 LSKL-------------KKTKLSLTTIQKHYLVLNGALNKAIKLQMLNDNPCKYVDTPKR 160 Query: 152 SRTIPDPLSREEFIRLIDACRNQQAKNLWC-----VSVYTGVRPGELCALGWEDIDLKNG 206 S+ L+ EE + + ++ +++ TG+R GE+C L W DID N Sbjct: 161 SKYKASILTFEELHSIYTNLNTKIYEDYIMKLGMDLTIETGLRRGEMCGLQWSDIDFDNK 220 Query: 207 TMMIRRNLAKD----RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFR 262 + + L + + + KT + R + L I L+S + ++K + Sbjct: 221 ILNVNTALIRVNNDYKISNLKTD-SSYRKLPLSNEIIKILKSHKSKQNINKIKYGNNFVY 279 Query: 263 EYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGL-RHRKSYQSRHTY 321 G + + Q K + ++ + + RH+ Sbjct: 280 SNKFDGDS------TEYNLIFTWENGRYIIPSNFLQRLKRLCKYCKIEKNIRWHDLRHSN 333 Query: 322 ACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 A L + I ++GH+ Q +Y E N +++ L Sbjct: 334 ATILLKNKISMKVIQERLGHSLMQTTSDIYAHVTEEMNREATDVISNVL 382 >UniRef50_C9C7Z3 Phage integrase n=2 Tax=Bacilli RepID=C9C7Z3_ENTFC Length = 344 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 64/367 (17%), Positives = 124/367 (33%), Gaps = 54/367 (14%) Query: 30 KFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKL 88 + A++ + + + + V +++ ++ + + +IL + G+K + I+ Sbjct: 11 QASTAQKSKKFEYVYGLWFENYKKTVKESTWSSTKQIFDTHILKVFGDKFI-DKIDVFFC 69 Query: 89 LEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISP 148 E + + VF + + NP K +S Sbjct: 70 QEAVNTWSDSH---------------PKIFKKIKNYTSNVFDYAASLQIITSNPMKLVSI 114 Query: 149 LK-----ESRTIPDPLSREEFIRLIDACRNQQA--KNLWCVSVYTGVRPGELCALGWEDI 201 + + ++EE I ++A RN + + +TG+R GE AL W DI Sbjct: 115 PRGEALDIEDKNIEFYTKEELIEFLEAIRNDDDERYLFFSLLAFTGIRKGEAFALTWSDI 174 Query: 202 DLKNGTMMIRRNLAKDR-----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHI 256 D K+ T+ I + + + PK+++G R I+L I LR T + Sbjct: 175 DFKSKTLNINKTVTRGYQGRLIVNTPKSKSGK-RKIYLDNDLISLLRKYYTKNKTI---- 229 Query: 257 IDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRA-GL-RHRKS 314 Q +F + G + R + K L + + Sbjct: 230 ----------VTIQSENLIFH--------HDGLLYNPTVSRSWLNVIYKHHPELTKRITT 271 Query: 315 YQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFA 374 + RHT+A +GA+ + ++GHAD Q +Y N + + Sbjct: 272 HGFRHTHASLLFESGASLKDVQERLGHADIQTTSNIYTHVTETQNKKVINNFVAFMKNST 331 Query: 375 PTMPHNE 381 E Sbjct: 332 QGESKGE 338 >UniRef50_Q1CP24 DNA integration/recombination/inversion protein n=7 Tax=Streptococcus RepID=Q1CP24_STRPF Length = 387 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 75/386 (19%), Positives = 129/386 (33%), Gaps = 56/386 (14%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 G R V K D+ N T KEL+ +L + V + Sbjct: 43 GRTRKEVNQKAKHAQLDFL------SNGSTIKRKVVIKTFKELSHLWLETYKLTVKPQTY 96 Query: 61 NTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 + + ++I+ +G + I + + L Y + Sbjct: 97 DATVTRLNRHIMPTLGNMKV-DKITASDIQMLINRLSKYYVNYTA--------------- 140 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLKES---RTIPDPLSREEFIRLIDACRNQQA 176 + + V Q GV G + N + I ++ + + + ++ Q Sbjct: 141 -VRSVIRKVLQQGVLLGLIDYNSARDIILPRKQPNAKKKVKFIDPSDLKSFLEHLETSQH 199 Query: 177 K--------NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD--RFTVPKTQA 226 K L+ + + TG+R GE CAL W DIDL+NGT+ I + K+ + KTQ+ Sbjct: 200 KRYNLYFDAVLYQLLLSTGLRIGEACALEWGDIDLENGTIAINKTYNKNLKFLSTAKTQS 259 Query: 227 GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKN 286 G NRVI + K + +L+ R + Sbjct: 260 G-NRVISVDKKTLRSLKLYQMRQRQLFNEVGARV------------------SEVVFATP 300 Query: 287 YGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 +F + D K AG+ + RHT+A L AG + + ++GHA+ M Sbjct: 301 TRKYFNASVRQSALDTRCKEAGIERFTFHAFRHTHASLLLNAGISYKELQYRLGHANISM 360 Query: 347 VFQVYGKWMSENNNAQVALLNTQLSE 372 YG + V ++ Sbjct: 361 TLDTYGHLSKDKEKEAVLYYEKAMNN 386 >UniRef50_A9BYB6 Integrase family protein n=2 Tax=Comamonadaceae RepID=A9BYB6_DELAS Length = 375 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 90/382 (23%), Positives = 161/382 (42%), Gaps = 47/382 (12%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLN 61 +R+ + I+ G F FP S +T+ +L ++L +K+ E+ ++++ Sbjct: 39 RMRAEILGKIERGTFVLGDYFPDSPRARADV---PSMTVGQLFGEWLDVKKPELQHSTIH 95 Query: 62 TYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 +Y+ I+ VR++L+ + ++ + + T NN Sbjct: 96 SYQQT----------------IDSYHFDGVRRDLVGNFTFRSLKRLLARLPANPKTFNNV 139 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWC 181 + L V ++G L + + I + + PDP + +E L+ + + A+N + Sbjct: 140 ASVLRQVLEYGYKAKILTEPLHESIEMRRRQKPEPDPFTLDEVEVLLSKMKAEAARNYFE 199 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDA 241 + ++G+RP EL AL W +DL++GT+M+ L + R KT R + L A DA Sbjct: 200 FAFFSGLRPSELIALTWSKVDLRSGTVMVDSALTRGRVKGTKT--SEVRKVELPGRARDA 257 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWD 301 L Q +++L+ VF ++N W Sbjct: 258 LERQRKVSQLA-------------------GGRVFLTVAGGELENTDMPLD-----SWWK 293 Query: 302 AAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNA 361 A+K +G+RHR + Q+RHTYA L AG PA+ A QMGH +M + Y KW+ + Sbjct: 294 PAMKVSGIRHRDARQTRHTYATMMLMAGVTPAYAARQMGHG-IEMFLRTYSKWIDGADKG 352 Query: 362 QVA-LLNTQLSEFAPTMPHNEA 382 L++ +S P Sbjct: 353 AEQRKLDSFISASKPKAGTQTG 374 >UniRef50_C7WMG1 Integrase n=9 Tax=Enterococcus RepID=C7WMG1_ENTFA Length = 382 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 64/386 (16%), Positives = 137/386 (35%), Gaps = 58/386 (15%) Query: 3 LRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNT 62 R+ I + Q + + ++T +E+A +L + V ++S + Sbjct: 37 FRTQKEAKIALARLEMEIQ-------KNGIPSSTNITFQEVAFMWLENYKNTVKESSYSR 89 Query: 63 YRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 + + +IL G+ + S I+ ++ + + + Sbjct: 90 TEIIFRKHILPSFGKIEI-SKISTAYCQKIVNTWHSKGSSKQYPL--------------F 134 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKES-----RTIPDPLSREEFIRLIDACRNQ-- 174 + +N VF+F ++ G NP + K ++++ + + Sbjct: 135 INYMNQVFKFAINIGVTNQNPVINVIVPKNQDIITSEKKIKFYTKDQLQIFLKSIEQSES 194 Query: 175 -----QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK----DRFTVPKTQ 225 + L+ + ++G R GEL AL W+D+++K G + I + +AK PKT+ Sbjct: 195 AYITIRDYTLFRLLAFSGCRIGELLALTWDDLNIKTGELQINKTIAKSDHYYVSNTPKTK 254 Query: 226 AGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVK 285 +NR + L I L+ + + +F E + Sbjct: 255 K-SNRTLILDAKTITILKKWKLEQKKYLLKLGYTQPSR-----------IFTNEENEFTI 302 Query: 286 NYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQ 345 N +I ++ K+A L + + RHT+A AGA+ + ++GHA+ + Sbjct: 303 N-------QAITDRYNIYRKKANLPNIGLHGFRHTHASLLYYAGADHKEVQERLGHANIK 355 Query: 346 MVFQVYGKWMSENNNAQVALLNTQLS 371 Y ++ L+ + Sbjct: 356 TTLDTYTHLTNDGKEKTTEKLSKYIG 381 >UniRef50_P96629 ICEBs1 integrase n=1 Tax=Bacillus subtilis RepID=INT_BACSU Length = 368 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 69/375 (18%), Positives = 131/375 (34%), Gaps = 38/375 (10%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLN 61 +R+ + + + + E+ ++R ++ L +LA E + Sbjct: 26 RIRTRPVASTRKEALELEAKLRREFQEERARKSRS-VSFPTLISIYLASCEIDSKPNYYQ 84 Query: 62 TYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 + +I K+++ K + ++ +T + + + G S +VNN Sbjct: 85 NQKYIIN--------KHISDYFLKSDIQKITHREITDF-----RKHLMETGLSNKSVNNI 131 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQ--AKNL 179 MT+L+ +F V L NP + L +R EEF + I Q K Sbjct: 132 MTSLSKIFDTAVHEEILKRNPCDNVKRLPLTRKKMKFWRPEEFKKFISLIPQDQLLFKTF 191 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK----DRFTVPKTQAGTNRVIHLI 235 + V+ TG+R GE+ AL W+DID + + ++ T PKT+ R + + Sbjct: 192 YTVAFLTGLRCGEMLALQWKDIDKILLEIDVHKSCTWLDGQFVVTTPKTKNSIRR-VSIN 250 Query: 236 KPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDS 295 K + L + H + T++FQ + D Sbjct: 251 KKLLKLLERWKEAQEELFNELGIRHSHD---------TYIFQYKD--------TPSRKDI 293 Query: 296 IRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 + K + L + + RH++ + G + I ++GH + VYG Sbjct: 294 FSRKIKYFCKDSDLTPIRLHDFRHSHVALLIHQGEDYITIKERLGHGSVKTTIDVYGHLY 353 Query: 356 SENNNAQVALLNTQL 370 L+ L Sbjct: 354 PNKQKEMADKLDDLL 368 >UniRef50_A0KWT4 Phage integrase family protein n=5 Tax=Gammaproteobacteria RepID=A0KWT4_SHESA Length = 407 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 83/391 (21%), Positives = 154/391 (39%), Gaps = 59/391 (15%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQD--------------------LTIK 41 + +++ I+ F + FPSS +F E T + Sbjct: 40 NILNTIEAEIRLNRFVFKSYFPSSSRCSQFSEYDIRVQQHLAENVEPLTVNIMSNIPTFE 99 Query: 42 ELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQ 100 E +++ + + K+ + +I+ +L G L + I + L++ R + Sbjct: 100 EFVGEWVVENKIQWKKSHCKNIQMIIECYLLPAFGHIRL-NEITRPSLIKFRASIAD--- 155 Query: 101 IPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLS 160 S T S +N+ MT L + + PF I PL+ +T+ +P S Sbjct: 156 ---SRRTGTTEKLSNDWINHVMTPLRGILNEAA-LRFDFPTPFVNIKPLRIDKTVIEPFS 211 Query: 161 REEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFT 220 E ++ R+ +N + V +T +R E+ L W+ ++L ++I+ L Sbjct: 212 LAEVQYFLEHIRDD-FRNYYTVRFFTAMRTAEIDGLKWQFVNLDRYEILIQETLVDGYVE 270 Query: 221 VPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEV 280 PKT + + R I L +P +DAL+ Q +T + Sbjct: 271 TPKT-SASYRSIQLSQPVVDALKRQRKVTG---------------------------NKT 302 Query: 281 SARVKNYGDHFTVDSIRQM-WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQM 339 G+ ++ + W A+ L+ R+ YQ+RHT A L AG NP +IA QM Sbjct: 303 YVFCNASGNPLEHRNVTKRIWYPALDEMCLKRRRPYQTRHTCATLWLAAGENPEWIAKQM 362 Query: 340 GHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 GH+ +M+F+VY +++ + + + Sbjct: 363 GHSTTKMLFEVYSRYVPNATRQDGSAFDRLI 393 >UniRef50_D1CCF9 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCF9_THET1 Length = 357 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 72/376 (19%), Positives = 128/376 (34%), Gaps = 54/376 (14%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 R S + ++ + E LT+++ ++L ++ E+ ++ Y Sbjct: 28 RISRYAKTRREAQKQLRELLEA-AAEHRLVPPNKLTLEQYLAEWLEVRSRELRVSTRVNY 86 Query: 64 RAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 + +I+ +I +G + L ++ +L L Sbjct: 87 QRLIEQHICPALGGRRL-QALAALELSRWLAGLGERL---------------PRRAQEAY 130 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDAC---RNQQAKNL 179 L+ V G LA NP + P K R P +R++ LI A + L Sbjct: 131 ALLHKALADAVRLGLLATNPLDRVEPPKHQRRRPTLPARDQIALLIAALEAGKAGWYSEL 190 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL----AKDRFTVPKTQAGTNRVIHLI 235 + +G R GE L W D+D + G++ I R L + + PK++AG RVI L Sbjct: 191 LLFLLGSGCRIGEALGLEWGDVDWQEGSVRISRQLLEVGGEVHESPPKSRAG-ERVIALP 249 Query: 236 KPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDS 295 A++ALR Q + + G + Sbjct: 250 AFALEALRQQRAKKL----------------------------GKYCFLSSTGTTPCRRN 281 Query: 296 IRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 + + A GL + + RH +A AG P +++GH+ + QVY + Sbjct: 282 VLRALHAVCAELGLPRLRIHDLRHVHASLLAHAGVPPKVAQSRLGHSSPMVTLQVYQHVL 341 Query: 356 SENNNAQVALLNTQLS 371 + L L Sbjct: 342 DGADREAALRLERVLG 357 >UniRef50_A7GRV3 Phage integrase family protein n=18 Tax=Bacillus cereus group RepID=A7GRV3_BACCN Length = 376 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 62/350 (17%), Positives = 127/350 (36%), Gaps = 46/350 (13%) Query: 27 NLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINK 85 +L D+ +L E ++ KET ++L Y+ +++ ++ G+K L S+I Sbjct: 50 DLANGDFENNDIRFSQLVEIWMQEKETTCRPSTLYQYKRILRSRVMPEFGDKKL-SNIKP 108 Query: 86 EKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKG 145 + ++++ + G + +++ L + GV+ ++ NP K Sbjct: 109 LTVHNFHQKMI-------------KEGLTTKYISSVDVMLKQILDKGVELEMISSNPAKK 155 Query: 146 ISPLKESRTIPDPLSREEFIRLIDACR-NQQAKNLWCVSVYTGVRPGELCALGWEDIDLK 204 K + + E+ + ID + + ++++TG+R GE+ AL W DID + Sbjct: 156 AKRPKVKKKAQASWTIEQAMTFIDCAKLKGSYYIAFVLALHTGMRIGEVLALQWGDIDFE 215 Query: 205 NGTMMIRRNLA----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVH 260 T+ ++R L K KT+A +NRVI + + +D L + + Sbjct: 216 KKTIHVQRTLTLVDGKYVLGETKTEA-SNRVIPMTEELVDELVEYQKYKKENPL------ 268 Query: 261 FREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHT 320 +IR A + + + + + R T Sbjct: 269 -------------------DLLICTRNKKIVHPYTIRYQMKALCEAIDVPYIRFHDIRRT 309 Query: 321 YACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + + + N +A +GH + +Y E L L Sbjct: 310 FTTILIDSNVNAKVVAKLLGHTNVSTSLNIYTDVYEERQIEAAEKLQNAL 359 >UniRef50_C1SH28 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SH28_9BACT Length = 410 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 89/383 (23%), Positives = 164/383 (42%), Gaps = 52/383 (13%) Query: 8 CYAIKTGVFDYAKQFPSSRNLEKFGEARQD-LTIKELAEKFLAL-----KETEVAKTSLN 61 AI G F+YA+ FP+S+ F R+ T E+AE++ K E+ +T+L Sbjct: 53 EQAILDGNFEYAEWFPNSKKCRLFNSVRKSHKTFAEVAEEWKEHVERLHKAGELKRTTLR 112 Query: 62 TYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 Y +K+IL +I K + + + ELL S ++NN Sbjct: 113 NYMNSLKSILDYFA-IYEMQNITKSLVDDYKFELL-------------DKPLSKKSINNK 158 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACR--NQQAKNL 179 +T L +F + + GY+ N + +P ++ E +++ + N + + Sbjct: 159 LTPLRRIFDYAYEMGYIEHNVMDRVKNFTLELPEIEPFNQLEVQAILNHLQKNNPKFHAM 218 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAI 239 + + +TG+R GE+ A+ W++ D + ++ + + R PKT+A + R++ L A+ Sbjct: 219 FTILFHTGMRIGEVLAMKWKNFDEMFCSYHVKEHFTEKRLDTPKTKA-SKRIVPLTDEAM 277 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHF--TVDSIR 297 ALR+ + F YGD + + + ++ Sbjct: 278 KALRNHK--------------------------QYTFMKSDFIFCNQYGDPWVSSDNIMK 311 Query: 298 QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 Q+W+ +K+ G+ +R YQ RHT+A S+ AG N A IA +MGH + + Y K++ Sbjct: 312 QVWEPMLKKLGIAYRIIYQCRHTHASLSILAGDNLAHIAERMGHKNVGTLITRYAKYVKS 371 Query: 358 NNNAQVALLNTQLSEFAPTMPHN 380 Q + + LS + Sbjct: 372 VQFQQP-KIGSFLSNSGHDLQSG 393 >UniRef50_A8HM00 Phage integrase n=5 Tax=Proteobacteria RepID=A8HM00_BURPS Length = 411 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 95/396 (23%), Positives = 161/396 (40%), Gaps = 56/396 (14%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLE-KFGEARQDLTIKELAEKFLALKETEV----- 55 LR + I+ G F+Y + FP S+ + ++T+ E + F+ V Sbjct: 51 RLRGEILRKIEMGTFNYGEYFPESKRAATPRAASPSEVTVGERLDDFMTQARKAVAKTRM 110 Query: 56 AKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSA 115 + ++L YR V+ + L +L++VR L + + Sbjct: 111 SPSTLEGYRKVV--------DGRLRPRWGAVRLVDVRPADLRKWISDLDVTL-------- 154 Query: 116 VTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK-------ESRTIPDPLSREEFIRLI 168 T N + L +V +++ + +NP I K S DP S +E ++ Sbjct: 155 KTARNILGPLGSVLADALNDELIDENPLTKIDVRKLLSKTTRPSDYEVDPFSIDEIRAIL 214 Query: 169 DACRNQQ----AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKT 224 A A+NL+ + ++G+R EL AL W +DL G + +R KT Sbjct: 215 AAADELYPGGAARNLFQFAFWSGMRTSELIALDWLHVDLNAGVVRVRNAQVVGTMKTTKT 274 Query: 225 QAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARV 284 +AG R + L+ A AL +Q +TR + VF R Sbjct: 275 KAG-LRDVLLLPSARAALEAQREVTR------------------GMEHNRVFVVPWHGRP 315 Query: 285 KNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADA 344 + V+ W +K+A +R+R YQ+RHT+A L+ G NP ++A QMGH D Sbjct: 316 WSGDKQIRVN----CWTYVLKKAEVRYRNPYQTRHTFASMLLSRGENPLWVAQQMGHVDT 371 Query: 345 QMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHN 380 +M+ + YGKW+ +++ +FA P + Sbjct: 372 EMITKTYGKWIPDSSATGGYKPLNAWDDFAGAAPKS 407 >UniRef50_B2TP23 Prophage LambdaBa04, site-specific recombinase, phage integrase family n=3 Tax=Clostridiales RepID=B2TP23_CLOBB Length = 398 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 125/347 (36%), Gaps = 26/347 (7%) Query: 35 RQDLTIKELAEKFLALKET-EVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 +++ + + ++ + +T+++ Y IK + + KL + Sbjct: 60 PSEISFNDYLDYWIKEYAQVNLKETTVDNYNKKIK--------LYIKPKLGIYKLKSLTP 111 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVD-NGYLADNPFKGISPL--- 149 +L + K N G S T+ L+ + V+ GY+ +P + Sbjct: 112 AILQSFINEKFN-----EGFSRNTLLVLKGILSGSLNYAVEPLGYIKFSPMAAVRLPLKR 166 Query: 150 -----KESRTIPDPLSREEFIRLIDACR-NQQAKNLWCVSVYTGVRPGELCALGWEDIDL 203 + +S E+ + + + ++ G+R GE A+ W+D+DL Sbjct: 167 AVPNTPTRKKEKYIVSEEQMEGIFERFPFGHSSYLPLQLAYRCGLRLGEAFAITWDDVDL 226 Query: 204 KNGTMMIRRNLAKDRFTV--PKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHF 261 KN + I + + + + R+I L ID L+ R K + +++ Sbjct: 227 KNQKLDINKQVQYKNKQWYFTPPKYDSYRIIDLDNTIIDILKKYKQQQRKDKIYYGELYT 286 Query: 262 REYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTY 321 +KQ ++ G + ++ + + G++ + RHT+ Sbjct: 287 ELKINDKKQIKETDGTEIHLINIRENGTYIQPRVMQHCFHIIHHKLGIKELDYHSLRHTH 346 Query: 322 ACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNT 368 A L++GAN + ++GH M VY E + +LN Sbjct: 347 ATMLLSSGANIKAVQERLGHKKLDMTLDVYTHVTDEMRRNTIDILNK 393 >UniRef50_D2SF19 LigA n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SF19_9ACTO Length = 397 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 69/334 (20%), Positives = 130/334 (38%), Gaps = 52/334 (15%) Query: 32 GEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLE 90 AR +T+ + A+++LA +T V ++L Y +++ ++L G+ LA + + Sbjct: 57 APARGRVTVADWADRWLAS-QTGVKPSTLYRYGNLLRTHVLPTWGKHQLAD-VTHADVAV 114 Query: 91 VRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK 150 +LL G +A TV + + V +G + NP + + + Sbjct: 115 WVAKLL-------------GQGSAAGTVRQAHRVFSLLLGLAVRDGRIPRNPAERVPLPR 161 Query: 151 ESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 R+ P L+ +E RL DA + ++ + YTG+R GE+ AL +D + I Sbjct: 162 VIRSEPRFLTHDEVERLADAAGAE--GDVIRLLAYTGLRFGEMAALRVRRVDFLRRRLTI 219 Query: 211 RRNLA----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 + + F PKT R + L + L + + Sbjct: 220 AEAVTEVGGRLEFGTPKT--HQQRTVPLPATLAEPLARRCEGKQ---------------- 261 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM-WDAAIKRAGLRHRKSYQSRHTYACWS 325 + G + + R++ +D A++ AGL + RHT A + Sbjct: 262 -----------GDDLLVTTASGTVLRLRNWRRVVFDPAVRAAGLSDVTPHDLRHTAASLA 310 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 +++GA + +GHA A M VY + ++ Sbjct: 311 VSSGATVKAVQRMLGHASAAMTLDVYSGLVDDDL 344 >UniRef50_Q831G3 Site-specific recombinase, phage integrase family n=1 Tax=Enterococcus faecalis RepID=Q831G3_ENTFA Length = 379 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 120/348 (34%), Gaps = 30/348 (8%) Query: 29 EKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKL 88 E DLT+K++ E + + + T + KN + + I K+++ Sbjct: 50 ENKLTTNSDLTLKDIYEVYEEKYTQNLKPSYKQTQERIFKNYIEPYFKNTQIKLIKKQQI 109 Query: 89 LEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISP 148 + ++ LLT + S T+N + +L +F + G +NP I Sbjct: 110 YDFQQFLLTS-------KPKRKETLSNKTINMIIIHLQKLFNVAMKEGLSYENPCNQIDK 162 Query: 149 LKESRTIPDPLSREEFIRLIDACRNQQ--AKNLWCVSVYTGVRPGELCALGWEDIDLKNG 206 LK + D + +EF I + K + + +TG+R GE+ AL W DID N Sbjct: 163 LKVQKKEIDFWTLDEFTTFISHIDKNKPFLKVFYQFAFFTGMRAGEMIALTWSDIDFYNQ 222 Query: 207 TMMIRRN---LAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFRE 263 T+ I ++ + + T +NR I + L+ + + Sbjct: 223 TVRINKSAKLINGNYVTTTPKTESSNRYITINSKITAMLKKWQEIQPK--------LLID 274 Query: 264 YGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKR--AGLRHRKSYQSRHTY 321 + VFQ H + D + I + L+ + + RH++ Sbjct: 275 NFQNIDSDKLLVFQYSE--------KHPSSDYYSKQIKKIIVKNNLNLKPIRLHDFRHSH 326 Query: 322 ACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQ 369 + I ++GH+ YG + + + Sbjct: 327 VALLIHNNEKNTTIKERLGHSSITTTIDTYGHLYPNSQKSMSDKFDNY 374 >UniRef50_C0BF20 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BF20_9FIRM Length = 373 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 65/351 (18%), Positives = 127/351 (36%), Gaps = 51/351 (14%) Query: 34 ARQDLTIKELAEKFLALKETE-VAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEV 91 ++ +T+ E E +L + V + +Y K I + +G K L S I E + ++ Sbjct: 60 KKEKITLMEWYETWLEEYKKNRVKIGTYTSYEKYYKSTINNRLGNKEL-SEIRGEHIQKL 118 Query: 92 RKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE 151 +++ + G + ++ LN Q + NG + NP K ++ Sbjct: 119 YNDMV-------------KEGYAISSIKIVSAILNGCLQQAMKNGLIERNPVKLAELPRQ 165 Query: 152 S--RTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMM 209 + + +++E+ + + + V + TG+R GE+ L + DID K + Sbjct: 166 TGTKKERTAMTKEQQDLFMKYAEESYLYHFFSVMLRTGMRKGEMQGLKYSDIDKKQNVIH 225 Query: 210 IRRNLAKDRFT-----VPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY 264 +RR L PKT+ + R I L + + +Q Sbjct: 226 VRRTLKYIEGKGYFEDTPKTRT-STRDIPLTAAITEHIEAQRKYWGFK------------ 272 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAG-----LRHRKSYQSRH 319 V + + GD + + I+ D IKR S+ RH Sbjct: 273 ----------VVRMDQYLFCNENGDPISRERIQGEIDRIIKRIKSDGYDFPRITSHVFRH 322 Query: 320 TYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 T+A ++ AG P + +GH+ M +Y + + ++ + Sbjct: 323 TFATRAIEAGMPPQVLKTILGHSSLAMTMDLYSHVLPDTKADEMQKIANVF 373 >UniRef50_C1SH59 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SH59_9BACT Length = 390 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 71/353 (20%), Positives = 136/353 (38%), Gaps = 50/353 (14%) Query: 6 SVCYAIKTGVFDYAKQFPSSRNLEKFGEARQD--LTIKELAEKFLALKETEVAKTSLNTY 63 + I F YA+ FP SR + A ++ A +L ++T + + TY Sbjct: 53 ELECKIDDKTFKYAEYFPESRVAKALPMADSSPQISFGTYAILWLDSQKTVFSHATFITY 112 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 + I N+L+ ++ +++ + Y S T+ N++ Sbjct: 113 TSSINNLLATFENMSIC---------DIKPAHIRTYIKNSE--------VSPKTLKNHVG 155 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQ--AKNLWC 181 L+++ V++ + NP + S DPLS EE +++ ++ + Sbjct: 156 VLSSILSAAVEDDLIPKNPCTSVKLPHISSVEVDPLSLEEITMILNWMKSHHPNMLAFFA 215 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDA 241 V+ +TG+R GE+ L W DID + T+ I R + + +T+ +R + ++ + Sbjct: 216 VAFFTGMRTGEIMGLQWGDIDFNSHTITISRTITAGKLKH-RTKTADSRTVDILTELDEY 274 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV--DSIRQM 299 L F + + F + I+ Sbjct: 275 LSYHK--------------------------QFTYMKSEWLFLTYENKPFNKTDNIIKTY 308 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYG 352 W +K G+++R YQ+RHT+AC L G N ++ +GH M+ + YG Sbjct: 309 WKPCLKALGIKYRTLYQTRHTFACLMLDVGENINWLKKMLGHKTLDMILRRYG 361 >UniRef50_A8RK44 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RK44_9CLOT Length = 366 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 66/342 (19%), Positives = 119/342 (34%), Gaps = 46/342 (13%) Query: 38 LTIKELAEKFLALKETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELL 96 + K+ ++ + + +T+L + K +L GE + ++I + + EL+ Sbjct: 56 MKFKDFVALYMKDADPRLRETTLANKHYLFNKKVLPYFGEMPI-NAIKPTDIRNWQNELI 114 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGI-SPLKESRTI 155 G S + L A F F V L +NP + K++ Sbjct: 115 N-------YRRPNGRGYSPTYLRTINNQLTAAFNFAVKFYGLRENPCHKAGTMGKKNADE 167 Query: 156 PDPLSREEFIRLIDACRNQQA-KNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL 214 + EEF I A ++ ++ V YTG+R GEL AL EDID + + +N Sbjct: 168 MLFWTNEEFKVFIKAMESRPVGYTVFMVMYYTGLRVGELLALTPEDIDFDRHIISVNKNY 227 Query: 215 A----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQ 270 KD PKT+AG R + + K L+ + + Q Sbjct: 228 QHLNGKDYIYPPKTEAG-YREVVMPKVLESCLKDYLAK-----------------LYDVQ 269 Query: 271 KCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGA 330 +F + + + +G + + + RHT+A + G Sbjct: 270 PTDRIF-------------PYDRGWVGRQMKYGCDHSGTQKIRVHDVRHTHASLLIDMGC 316 Query: 331 NPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 P +A ++GH Q + Y + L+ + Sbjct: 317 TPLLVAERLGHERVQTTMETYSHLYPNKQSEVANQLDAMAEK 358 >UniRef50_B2THD3 Site-specific recombinase, phage integrase family n=3 Tax=Clostridium RepID=B2THD3_CLOBB Length = 384 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 66/373 (17%), Positives = 141/373 (37%), Gaps = 30/373 (8%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKE-TEVAKTSLNTYRAVI 67 + K + ++ ++ K+ K+ + V+ + N Y I Sbjct: 33 FKTKKDAEIWVTDTLGKKHKGYIALTNSNILFKDYINKWFNEYKVLNVSINTKNDYIYRI 92 Query: 68 K-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLN 126 +++ +IG L S ++ + + +L+ ++ G V+ +N Sbjct: 93 NAHVVPMIGNYKL-SELSTSIIQDFYNKLI------------SEKGMKPVSAKKVYDIVN 139 Query: 127 AVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYT 186 ++ + + D P I K + + +++E +D + + + V T Sbjct: 140 GCLKYAKKSKLIYDLPTD-IEKQKLVKPEIEFWTKKEIDFFLDKINDLYLYSPVFLDVLT 198 Query: 187 GVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPK------TQAGTNRVIHLIKPAID 240 G+R GELC L W D++L++G + + + +DR + ++R I + ID Sbjct: 199 GLRVGELCGLRWCDVNLESGYIEVNSQVIQDRINKELIFSSILKTSTSHRNISIPPVLID 258 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMW 300 L++ M + E+ + RE + + F V+ K ++D I + Sbjct: 259 FLKA-MKEDNNALENDFVILSREGLMCNPRNLSMNFTKTVAKYKK------SIDDIEKEN 311 Query: 301 DAAIKRA-GLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 K L+ + RHT+A + G N +++++GH D + Y M + Sbjct: 312 KEVPKDYMQLKQISFHGLRHTHATLLIFNGENIKVVSDRLGHRDISITLNTYTHIMDDMK 371 Query: 360 NAQVALLNTQLSE 372 + LLN + Sbjct: 372 SNTATLLNNLFKK 384 >UniRef50_Q859R3 ORF39 n=1 Tax=Thermus phage IN93 RepID=Q859R3_9VIRU Length = 349 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 120/339 (35%), Gaps = 39/339 (11%) Query: 35 RQDLTIKELAEKFLALKE--TEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVR 92 L + + ++ + ++ T+L Y +K++ I L S + Sbjct: 20 PSGLRLGDYLASWIEHRAATRDLRPTTLRNYHVYLKHVEP-IAHLPL-SRLTPLTFRAFF 77 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 EL G S + L A + + L NP + P + Sbjct: 78 AELA---------------GFSPSHRRHIYQFLRAALRDAMRADLLDQNPMDAVDPPRGG 122 Query: 153 RTIP-DPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 P EE R ++A + + L+ + + T +RPGE AL WE D + + +R Sbjct: 123 AVRPAKAWKPEEVARFLEASKGHRLYPLFALMLATRLRPGEALALRWE--DWEGDVLHVR 180 Query: 212 RNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQK 271 L +D P G+ I+L L K + Q Sbjct: 181 HTLRRDGTLGPAKTPGSVAPIYLDPDTQALLAWWRERLEEEKAS----------TPDWQD 230 Query: 272 CTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGAN 331 +F G ++ ++ + A ++AG+ + RHTY +L AG Sbjct: 231 HGLMFPSSK-------GTPLEYNNFKRAFYALQEKAGVSRITPHGLRHTYTSLALRAGLP 283 Query: 332 PAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 P +A ++ HAD +VY + M E++ A L+T L Sbjct: 284 PKVVAARLRHADPTFTVKVYQQLMEEDHRAGALPLDTLL 322 >UniRef50_C8X883 Integrase family protein n=5 Tax=Actinomycetales RepID=C8X883_NAKMY Length = 406 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 73/402 (18%), Positives = 124/402 (30%), Gaps = 57/402 (14%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSLNT 62 R V K V + +R+ + Q T+ + +L + TS + Sbjct: 36 RRHVMAKTKGVVVQKVRDLERARDQGQVRRPGQRWTVAAWLDHWLENIARPNLRATSYSA 95 Query: 63 YRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 Y+ ++ +L I K +L + E L + + G + Sbjct: 96 YQVAVRR--------HLIPEIGKHRLDRLEPEHLE-----RLYRKIVADGGRPGRAHQVH 142 Query: 123 TNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCV 182 + G++A N P + P + +E ++ R W + Sbjct: 143 RTIRTALGEAHRRGHVARNVAALARPPRVQLEPIQPYTVDEVRAIMSTARAHPNGARWAI 202 Query: 183 SVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRF----------------------- 219 ++ G+R GE+ L W D+DL G + IR + + Sbjct: 203 ALALGLRQGEVLGLTWSDVDLDAGFLRIRTTRHRPTYAHGCGGTCGKSAGRCPQRIQMNR 262 Query: 220 --TVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQ 277 K+ AG RV+ L + LR Q ++E R Q +VF Sbjct: 263 AAGDTKSDAG-RRVVGLPAALGELLREQRVEQER---------WQEAARQLWQNGDWVFT 312 Query: 278 PEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIAN 337 V G S W A +K AG+R + + +RHT A L G + Sbjct: 313 SRV-------GAPLNPSSDYHRWKALLKEAGVRDGRLHDARHTAATVLLVLGVPERTVMG 365 Query: 338 QMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPH 379 MG + M + Y + L + P Sbjct: 366 IMGWSSTAMAAR-YQHVTDPIRRQVADQVGGLLWSDERSRPE 406 >UniRef50_UPI0001C3746F phage integrase family site specific recombinase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3746F Length = 366 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 75/373 (20%), Positives = 144/373 (38%), Gaps = 54/373 (14%) Query: 5 SSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYR 64 SV V + + R + R LT++E A+++L+ V ++S Y Sbjct: 33 RSVYGKTLAEVKEKMADLYAVRTEKNISAIR--LTVREAADQWLSAARLRVKESSYANYE 90 Query: 65 AVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 ++ +IL I+G + ++S + ++ + LT + Q G SA TV + MT Sbjct: 91 NILNNHILPILGGEYISS-LTTGRINDFIHYKLTN------GRLKGQGGLSAKTVRDIMT 143 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAK--NLWC 181 +V ++ + + + K D L+ EE +L + Sbjct: 144 VYRSVERYVYREYGIRE---TNFTMPKTESGNADVLNCEERKKLESYLIKNMDRTNLAVL 200 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD--------RFTVPKTQAGTNRVIH 233 + ++TG+R GELC L WEDID + T+ ++R + + PK++ + R + Sbjct: 201 LCLFTGLRIGELCGLKWEDIDFEKNTLSVKRTVQRVSRNGKSQVIIGSPKSRT-SIRTVP 259 Query: 234 LIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV 293 + + LR ++ + + N Sbjct: 260 IPIFMMALLRKFRSI------------------------------DSLFVITNLSKPTEP 289 Query: 294 DSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGK 353 +++ + A +K G+R+ + RHTYA + G +P ++ +GHADA + Y Sbjct: 290 RTMQNRFKAILKLCGIRNVNFHSLRHTYATVCIEKGFDPKALSELLGHADASITLNRYVH 349 Query: 354 WMSENNNAQVALL 366 + V+ L Sbjct: 350 SSMDVKKNYVSRL 362 >UniRef50_C0EC03 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EC03_9CLOT Length = 440 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 112/353 (31%), Gaps = 48/353 (13%) Query: 38 LTIKELAEKFLALKETE----------VAKTSLNTYRAVIKN-ILSIIGEKNLA-SSINK 85 ++ + ++L K + ++ + Y + N I E +A + K Sbjct: 103 ISFVDFLYQWLEYKYKSATGRVMDSKPIELSTYSGYEQQLNNPIAPYFREHPVALCDLTK 162 Query: 86 EKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKG 145 + +L ++ L TV +Y ++ + VD + NP Sbjct: 163 QDILAFYEKELER--------------VKPTTVKHYHALIHGALNYAVDKNLIPSNPADR 208 Query: 146 ISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKN 205 I K D E + L + + + + + ++ + G+R E+ L W D + Sbjct: 209 IIISKPEPFKGDYYLDSEVLNLFEVIKGHKIELVVLLTAFYGLRRSEVIGLKWSAFDFNH 268 Query: 206 GTMMIRRNLA-------KDRFTVPKTQAGTN-RVIHLIKPAIDALRSQMTLTRLSKEHII 257 IR + + K + ++ R LI + L +++ Sbjct: 269 NCFSIRHTVTTCNVKGERVTIKKDKAKNKSSLRTYPLIPFLKERLLEAKKQQEENRKLCG 328 Query: 258 DVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQS 317 + +EY V G+ + + + + + LRH + + Sbjct: 329 RAYNKEYL--------------GYVCVDVIGNLIKPNYVSSTFGKLLAKNNLRHIRFHDL 374 Query: 318 RHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 RHT A L G + +GH++ +YG A + + Sbjct: 375 RHTCASLLLANGVPMEQVKEWLGHSEISTTVDIYGHLQYATKKQSAAAIEQDI 427 >UniRef50_A2RN22 Phage integrase n=9 Tax=Streptococcaceae RepID=A2RN22_LACLM Length = 404 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 127/385 (32%), Gaps = 40/385 (10%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKEL---AEKFLALKETEVAKT 58 ++R++V + + A Q + AR+ ++ A + + V Sbjct: 41 QVRTTVTAKNRKTCENKAHQAMNKFIKNGSTVAREKVSFDNFNALATSWFDSYKLTVKAN 100 Query: 59 SLNTYRAVIKN-ILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVT 117 ++ +KN IL +G + I L + + + + G+S Sbjct: 101 TIRINSNFLKNYILPALGNYKVEK-ITTVLLQNIVNDWARNANTAEIVNGNREKGKSKDY 159 Query: 118 VNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR---TIPDPLSREEFIRLIDACR-- 172 + + + +G+ G ++DNP + K + +E R +D Sbjct: 160 -KLLLNIIKRILDYGMQLGVISDNPAIKVFSPKLKTRTVKKIKYFNNDELKRFLDYLDSL 218 Query: 173 -----NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK--DRFTVPKTQ 225 N ++ L+ + + TG+R E AL W DID N T+ + + L + + Sbjct: 219 QSTTANIKSTTLYKLLLATGLRICEALALSWSDIDFVNNTVSVSKTLIQYSNEIQDSAKT 278 Query: 226 AGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVK 285 +NR++ + I L+ + D VF R Sbjct: 279 KESNRLVSVDSETISMLKEWRKHQNYGAISLHDS--------------LVFSYHQKMRTY 324 Query: 286 NYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQ 345 RQ K+A + + + RHT+A + NP I ++GHAD Sbjct: 325 ELE--------RQHLVRHFKKAKVPNIGFHGFRHTHASLLMNNDVNPKEIQMRLGHADYS 376 Query: 346 MVFQVYGKWMSENNNAQVALLNTQL 370 + +Y E L Sbjct: 377 ITMNLYSHLAKEKKKETAEKFANIL 401 >UniRef50_A4J884 Phage integrase family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J884_DESRM Length = 367 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 68/357 (19%), Positives = 134/357 (37%), Gaps = 39/357 (10%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 +S V + K +AK F + L K + + + + + +L + + + + TY Sbjct: 29 KSKVFHGKKREAEQFAKIFET--KLRKSLQPGSQMLVSDYLDYWLKRIQPSIEERTFKTY 86 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 +K + +G+ L + + E EL S +V T Sbjct: 87 SWHLKRLKETLGDIELG-ELKVLLVQERLNEL---------------KDISETSVRKITT 130 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVS 183 + V L +P G+ + + LS +E I+ ++A + + + + Sbjct: 131 TFRTALRQAVVWELLEKDPTVGLRLPRNPKKEKKVLSSDELIKFLNAAKEYKYYLVLRIL 190 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNL-AKDRFTVPKTQA-GTNRVIHLIKPAIDA 241 TG+R GE L W+D++ GTM I R+ +K R + K + + R + + K ++ Sbjct: 191 AVTGMRLGECLGLMWKDLNFDKGTMKILRSADSKTRKVLDKPKNDSSRRTVTIDKETVEL 250 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWD 301 L++ K I + + VF G T +I + Sbjct: 251 LKTHRKKQAKRKVTSI-----------RIEDELVFH--------VNGRPITHKAIDRTIK 291 Query: 302 AAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 A+K+A L + + RHT L AG + +++ +GH+ +Y + + Sbjct: 292 TALKKAELPMIRIHDLRHTAGSILLDAGYSLPTVSSLLGHSTPATTAAIYSHAIRRD 348 >UniRef50_A6G3J3 Site-specific recombinase, phage integrase family protein n=3 Tax=Plesiocystis pacifica SIR-1 RepID=A6G3J3_9DELT Length = 363 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 70/364 (19%), Positives = 128/364 (35%), Gaps = 47/364 (12%) Query: 10 AIKTGVFDYAKQFPSSRNLE---KFGEARQDLTIKELAEKFLALK-ETEVAKTSLNTYRA 65 + G Y +Q ++ K +A Q T + A +F T ++ + Sbjct: 23 QTRRGAEAYERQLRNALLTGTYDKEAQADQAPTFRVFAREFQTNYVATNNKPSTQRSKER 82 Query: 66 VIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTN 124 V++ +++ G L +I + + L S T+NN++T Sbjct: 83 VLRLHLIPFFGYMRL-DAIGPRHIERYKATKL--------------KDYSRKTLNNHLTI 127 Query: 125 LNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACR-NQQAKNLWCVS 183 L + + + G + P I LK ++ L E RL++A R + + + + Sbjct: 128 LRKLLETAREWGLIDKVP--SIRWLKAAKPEFRWLDFAEAERLLEASRCEPEWRMMILLG 185 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALR 243 + TG+R GEL AL W+D+ + + +R+ +A+ PK +G R + L + Sbjct: 186 LRTGLRQGELLALRWQDVCFEARRIAVRQAVAEGILGTPK--SGRAREVPLSPATLAEFV 243 Query: 244 SQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAA 303 R + +VF G+ T + A Sbjct: 244 RHQARYRHLR------------------SPWVFCQLDGDHA---GEMLTKGMCKWPLRRA 282 Query: 304 IKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQV 363 RA L + RH++A G I +GH+ +M + Y V Sbjct: 283 RDRADLEALGWHDLRHSFASHLAMRGVPLKAIQELLGHSTIEMTMR-YAHLAPSTLIDAV 341 Query: 364 ALLN 367 A L+ Sbjct: 342 AALD 345 >UniRef50_UPI0001973B6A integrase family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973B6A Length = 408 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 79/356 (22%), Positives = 130/356 (36%), Gaps = 49/356 (13%) Query: 35 RQDLTIKELAEKFLALKETEV-AKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVR 92 LT+ + +L + + V + Y+ V K +I ++G K L I + + + Sbjct: 63 DDSLTLSVWFDNWLEIYKYNVIRDNTRVYYKQVFKKHIEPLLGHKRL-KDITQLHIRALL 121 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 KEL + G T N L ++ + + Y NP KGI K + Sbjct: 122 KEL-------------DKQGLQFQTQNKVRVMLLDMYNKAILDNYAVRNPAKGIRLPKHN 168 Query: 153 RTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRR 212 + S EE I D C+ NL+ V+V TG+R GELCAL W+DIDL+ + + + Sbjct: 169 KRNKRVFSVEEQIDFFDCCKGTFYDNLFTVAVNTGLRQGELCALTWDDIDLEKKEINVEK 228 Query: 213 NLAKDR----------FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFR 262 L + PKT+ +NR + + K AL+ Q+ + R Sbjct: 229 TLLYQKLEGDTGKTFHINPPKTKT-SNRKVPINKQCEIALKKQLIQRNN-------IISR 280 Query: 263 EYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAG--------LRHRKS 314 + + EK +F Y + + Sbjct: 281 QSAKPEKGFENLLFT-------TKYATPICDQILIDAIKKIVNEINSVRSEIEQFEMFTP 333 Query: 315 YQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + RHT+A AG +P I +GH+ QM +Y ++ L+ Sbjct: 334 HCFRHTFATRCFEAGISPKVIQTYLGHSTLQMTMDLYTSVFKHCEEKAISRLSEYF 389 >UniRef50_B8I8G5 Integrase family protein n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I8G5_CLOCE Length = 378 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 129/352 (36%), Gaps = 33/352 (9%) Query: 24 SSRNLEKFGEARQDLTIKELAEKFLA-LKETEVAKTSLNTYRAVIKNILSIIGEKNLASS 82 + +++ LT++ +L +K + +T+L YR +I K+L Sbjct: 54 EADKIKQNLVFPSVLTVENWLTYWLDDIKAIKCEETTLYGYRNIIN--------KHLIPK 105 Query: 83 INKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNP 142 + KL E+ +L Y K S T+ + L + VD + NP Sbjct: 106 LGNYKLQELNPTILNKYFKGKL-----DEKLSQNTIRKHYDLLKDTLKTAVDEEKILKNP 160 Query: 143 FKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDID 202 + P+K + + + E+ L N + + + ++ G+R E+ L W++ID Sbjct: 161 LNKVPPIKVQKNEKNFYNVEQLKTLFTIVENDRMEIVVKLAGMLGLRREEIAGLKWDNID 220 Query: 203 LKNGTMMIRRNLAKDRFTV---PKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDV 259 L+N + I + + ++R ++ + I+ L S T K + + Sbjct: 221 LENRIITIAEARTQAGKKTVAKGTKNSSSHRTLYAPEEIINLLTSIKTTQEEQKRLLGEA 280 Query: 260 HFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRH 319 ++ E G+ + + + ++ I L + + RH Sbjct: 281 ----------------YKDEGYIMAWENGEPYRPNYLSDLFKKIIDDNKLPSLRLHDLRH 324 Query: 320 TYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 T+A + G N I+ +GH+ Q+Y + ++ + ++ Sbjct: 325 TFASIANELGTNLYDISKALGHSQVGTTSQIYTHMFDATHKKAISKIADVMT 376 >UniRef50_UPI0001BCC5A1 phage integrase n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCC5A1 Length = 416 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 76/379 (20%), Positives = 134/379 (35%), Gaps = 55/379 (14%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEAR-QDLTIKELAEKFLALKETEVAKTS 59 G R+ + K +A + ++ + +T+ E AE +LA V + Sbjct: 24 GRERTK-TFPTKGEARTWADEQERKVRRGEWVDPEMSRITVSEWAETWLATLV--VKPKT 80 Query: 60 LNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 + +Y ++++ ++L G L S + + + SA Sbjct: 81 MESYESLLRCHVLPRWGAVRLES-VALADVKAWVAGMRQQ----------NGRPLSASRT 129 Query: 119 NNYMTNLNAVFQFGVDNGYLADN---PFKG----ISPLKESRTIPDPLSREEFIRLIDAC 171 L + V++G LA N P G + P + L+ + L A Sbjct: 130 KQAYQVLTMMLDLAVEDGRLARNSAKPASGRSRSMVPPVQRDRAKKYLTPRQLEALAGAA 189 Query: 172 RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL--AKDRFTVPKTQAGTN 229 + + L YTG+R GE AL D+DL + +RR++ + T++ Sbjct: 190 GDGR--VLILTLGYTGLRWGEASALRVSDVDLLGRRIHVRRSISEVRGSLVFGTTKSHAT 247 Query: 230 RVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGD 289 R + + K L + + P+ G Sbjct: 248 RTVPITKSLAVELEALIDGRG---------------------------PDDPLFAAPGGG 280 Query: 290 HFTVDSIRQM-WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVF 348 + + R+ +D A+ RAGL H + RHT A +++AGAN + +GHA A M Sbjct: 281 WLHLRNFRRRDFDPAVARAGLPHITPHGLRHTAASIAVSAGANVKAVQKMLGHASAAMTL 340 Query: 349 QVYGKWMSENNNAQVALLN 367 VY E+ +A L Sbjct: 341 DVYADLFDEDMDALAERLE 359 >UniRef50_UPI0001C3741D prophage LambdaBa04, site-specific recombinase, phage integrase family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3741D Length = 395 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 57/353 (16%), Positives = 122/353 (34%), Gaps = 31/353 (8%) Query: 33 EARQDLTIKELAEKFLALK-ETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLE 90 +L++ + ++ + + T++ Y+ I+ +I IG+ LA +I E+L + Sbjct: 58 NTPSELSMHDYLNYWIEMYCIPNLKPTTVANYKKYIRLHISPKIGKYRLA-TITAEQLQK 116 Query: 91 VRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVD-NGYLADNPFKGISPL 149 + +++ G S TV L++ + V YL +P + Sbjct: 117 LINDMVAN-------------GYSKNTVIGIKGVLSSSLNYAVQPLHYLKTSPMAYVKIP 163 Query: 150 KESRT-------IPDPLSREEF-IRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDI 201 K SRT + + ++ + + + + G+R GE A+ W+++ Sbjct: 164 KGSRTNYRSSQYKREVIEKDIIDEIFVRFPKGSSTYLPLMFAYHCGMRLGEAFAITWDNV 223 Query: 202 DLKNGTMMIRRNLAKDRFTV----PKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHII 257 + + T+ I + L D + ++R I + + ++ L+ +KE+ Sbjct: 224 NFTDRTVTINKQLQWDLEKKFWYLTPPKYNSSRTIDIDETIVELLKEMQEKQIRAKEYYA 283 Query: 258 DVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQS 317 D + Y E V G +I+ K + Sbjct: 284 DEYSLIYYDEELGINESTGNVIDFVNVYENGGFIQPRTIQHTSQVIHKFY--PAFTFHSL 341 Query: 318 RHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 RHT+ L AG ++ ++GH + + +Y L Sbjct: 342 RHTHCTRLLEAGLPIKYVQERLGHKNISVTMDIYNHLTQSQAELSKRALEDVF 394 >UniRef50_B2TKJ3 Phage integrase family protein n=4 Tax=Clostridium RepID=B2TKJ3_CLOBB Length = 385 Score = 246 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 66/390 (16%), Positives = 138/390 (35%), Gaps = 46/390 (11%) Query: 4 RSSVCY---AIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKE-TEVAKTS 59 R + K + ++ S + ++++ + + + ++ Sbjct: 25 RKKIERAGGNTKKEALEALRKALSEYDNVGTIITESNISVSDYFDYWFNEYVLINCKYST 84 Query: 60 LNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 +Y+ +IKN L I +L E+ + + G S + Sbjct: 85 QVSYKRLIKNHLKPSLGIYQLKKITSSRLQELIN-------------LKYRNGFSKNYLG 131 Query: 120 NYMTNLNAVFQFGV-DNGYLADNPFKGISPLKESRTIP------DPLSREEFIRLID-AC 171 N L+ F++ V + ++ +NP + K + + ++ E++ ++ Sbjct: 132 NLYGVLSGAFKYAVYPSNFIKENPMTFVKMPKYNTKLINNPDDLKIITLEDYNNILKRFP 191 Query: 172 RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTV-----PKTQA 226 +S TG+R E+ +L W+ ID +N T+ + + L ++ F PKT Sbjct: 192 YGSNMYIPLQISFNTGLRAAEVMSLTWDCIDFENQTLRVEKILYRNEFKKWVFGSPKTH- 250 Query: 227 GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKN 286 + R I + + L+ + +K +V +K Sbjct: 251 SSYRTIKIGNTLLSLLKKFHKDQKENKLRYGPF--------------YVKHDYDFVCLKE 296 Query: 287 YGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQM 346 G+ T DS++ + G+ K + RHT+A L AGAN I ++GH+ Sbjct: 297 NGELLTTDSLKYLSKVVNYELGI-DFKFHSLRHTHATMLLEAGANIKDIQQRLGHSKLAT 355 Query: 347 VFQVYGKWMSENNNAQVALLNTQLSEFAPT 376 VY + + V L + + P+ Sbjct: 356 TMDVYSHVTKKMSQDSVRLFEEAIKKLPPS 385 >UniRef50_Q24VE5 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24VE5_DESHY Length = 466 Score = 246 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 60/377 (15%), Positives = 124/377 (32%), Gaps = 32/377 (8%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALK-ETEVAKTSL 60 +R ++ + GV ++ ++L K + + L + E +L + + V + Sbjct: 53 RIRPTIYDDSEVGVQKKLRKLLIKKDLGKSVKPNKTL-VGEWIRIWLDIYSKPNVGIGTW 111 Query: 61 NTYR-AVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 + Y +I + + S + + L L + + G S V Sbjct: 112 DGYDLNFTNHIENSFIARKTMSGLTTDDLQVYYNMKL------LNGRKDGKGGLSTRFVK 165 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNL 179 T +++ F V +G+L NP G+ + R ++E+ + A + + Sbjct: 166 AIHTVISSAFDQAVTSGHLEKNPASGVRISNKRRPKIKIWNKEQMALYLKAIKKDRLYAA 225 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD-----RFTVPKTQAGTNRVIHL 234 + +G+R EL AL W DID G I R + + K++ + R + Sbjct: 226 FVTDSKSGLRKSELLALRWSDIDFSTGLTKIERGWVRSPKGTLYLSDLKSEN-SERTLVF 284 Query: 235 IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVD 294 + L + K+ + VF + G + Sbjct: 285 STDLLKVLLEHKSRQDEEKKTAGKNYI---------DNGLVF-------CREDGSYINPS 328 Query: 295 SIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAG-ANPAFIANQMGHADAQMVFQVYGK 353 + + +A L + RH+ + L +G + I +GH D Y Sbjct: 329 TFTRRHYDLTAKAKLPRISVHALRHSISTALLESGKVDLKQIQEMLGHKDISTTGNYYTD 388 Query: 354 WMSENNNAQVALLNTQL 370 + L++ + Sbjct: 389 VLERMKQKTSELIDNLI 405 >UniRef50_C5UUP0 Phage integrase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUP0_CLOBO Length = 391 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 56/352 (15%), Positives = 123/352 (34%), Gaps = 51/352 (14%) Query: 40 IKELAEKFL-ALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTG 98 + +L + + ++ Y + +N + S ++ K+ E+ + + Sbjct: 62 FETFFSDWLFDVHFMGLKPSTQMRYETIYRNHIK-------NSELSDIKIKEITSKDIQT 114 Query: 99 YQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE------- 151 Y K + G S V + + ++ +N ++ N + KE Sbjct: 115 YYNNK-----IKRGCSVTLVKSIHKIITPCIRYAYNNNFIIKNFTSALILPKETEKDKLN 169 Query: 152 SRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 ++ P + EE + I R + + ++ ++ +G+R GEL AL W+DI+ K+ + + Sbjct: 170 KKSSVIPFTLEEQKKFISVIRGNKFEMIFLTALNSGLREGELLALTWKDINFKDKYINVN 229 Query: 212 RNLAKD--------------RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHII 257 +NL+ PKT+ G R + + AL+ ++ + Sbjct: 230 KNLSVVTEISKENGRGGSTLEVQTPKTKKGI-RKVSIPSFLATALKQYKKQQIKNRLKMN 288 Query: 258 DVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQS 317 + G++ D I + ++ ++ K + Sbjct: 289 QF----------------YNDNNLVFCDELGNYLNRDKIVYRFKKVLEDNKMKEIKFHDL 332 Query: 318 RHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQ 369 RHTYA G + + + +GH+D + Y + + LN Sbjct: 333 RHTYATRLFELGESAKTVQSFLGHSDISVTLDTYTHVLDSMKETTASKLNDL 384 >UniRef50_Q1BC50 Phage integrase n=4 Tax=Mycobacterium RepID=Q1BC50_MYCSS Length = 442 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 74/387 (19%), Positives = 130/387 (33%), Gaps = 68/387 (17%) Query: 35 RQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRK 93 T+ + +++ E + T+ ++ K ++ IG L +++ +LL + Sbjct: 61 PSTRTVTQFLDEWFTAVEASLDATTWQNWKDYAKSYVVPHIGNVKL-QQLDEPELLRLYA 119 Query: 94 ELLTGYQIPKSNY----------------------------------------------I 107 +LLT +I + Sbjct: 120 KLLTEGRIKQDRNYEMYCYWRRHAIDGESPAPREVADACGTTIHAARAAVRRYKSGILPT 179 Query: 108 VTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRL 167 PG + TV N ++ V Y A NP + P K SR+ ++E+ + Sbjct: 180 KMDPGLAPKTVRNIHAMIHRAMADAVAWKYKAHNPAANVRPPKRSRSRRTVWNQEDIQKF 239 Query: 168 IDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAG 227 + A + + +L+ + + TG+R G++C L W D+DL + + N G Sbjct: 240 LRAVSHDRFASLFLLELTTGIRRGQICGLRWHDVDLDVREVTVHDNRVVVAGHARDKAGG 299 Query: 228 TNR----VIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSAR 283 R I + + ALR + + P Sbjct: 300 KTRNADQTIAIDRVTAAALRKWREHQNEERAFFGAD----------------YHPGNYVF 343 Query: 284 VKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHAD 343 G DSIRQ +D AGL + RH+YA +L AG NP ++ ++GHAD Sbjct: 344 TFEDGRPPHPDSIRQRFDRLAAVAGLPRITFHDLRHSYATAALKAGVNPKIVSERIGHAD 403 Query: 344 AQMVFQVYGKWMSENNNAQVALLNTQL 370 Q Y + ++ L Sbjct: 404 VGFFLQTYAHVLKNDDRDAAEQAAAFL 430 >UniRef50_A7WY94 Integrase homolog n=25 Tax=Firmicutes RepID=A7WY94_STAA1 Length = 397 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 76/378 (20%), Positives = 130/378 (34%), Gaps = 64/378 (16%) Query: 17 DYAKQFPSSRNL------------EKFGEARQDLTIKEL-AEKFLALKETEVAKTSLNTY 63 Y F + + E+ E + +T K E FL +T+V + Sbjct: 31 KYRSGFTTKKEAREEYSKLLLMKPEELSENKDKMTFKHYIFEIFLPWYKTQVKLRTYENR 90 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 IK S +K S I + + +L + V Sbjct: 91 LPTIKKHFSYF-DKMAVSDIEPIDVQNWQLKL--------------SKKCKSSYVRAVQG 135 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCV- 182 + + G NP K I +K+ ++ + ++EEF ++I + + Sbjct: 136 LFSVAMDRAIVLGITTTNPSKIIGNVKKQKSKIEFWTKEEFEKVISLIYKEDYYQHFLFI 195 Query: 183 ----SVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD-----RFTVPKTQAGTNRVIH 233 TG+R GE A+ WEDID +G + I + L RF PKT+A + R I Sbjct: 196 SLWFLFMTGMRIGEATAIQWEDIDFDSGVLTINKTLYYKNQSNYRFVEPKTKA-SVRHIV 254 Query: 234 LIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV 293 L K + L + + + FV + G Sbjct: 255 LDKCTLTYLSEWKEVQQNLIQ-----------------TDFV--------MSYNGIPTQK 289 Query: 294 DSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGK 353 ++ + K AG+ + + RH++A ++ G NP I +++GH D + YG Sbjct: 290 HTLSYAIERYAKLAGIHRIRIHGLRHSHASLLISMGENPLIIKDRLGHEDIETTLGTYGH 349 Query: 354 WMSENNNAQVALLNTQLS 371 +N LN +S Sbjct: 350 LYPNSNFEVANKLNGAIS 367 >UniRef50_Q7A4J3 Int protein n=24 Tax=Bacilli RepID=Q7A4J3_STAAN Length = 390 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 69/412 (16%), Positives = 139/412 (33%), Gaps = 70/412 (16%) Query: 2 ELRSSVCYAIKTGVFDYAK--QFPSSRNLEKFGE------------ARQDLTIKELAEKF 47 R S+ +TG + Y F + + E A T K++A+ + Sbjct: 12 RYRISLGKDAETGKYKYISNSGFKRKSDAKHHAEMVERQLRNGDYIAPSTSTFKQVADDW 71 Query: 48 LALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYI 107 ++ EV +S+ I + + K + +I K ++ Sbjct: 72 ISQYANEVKVSSVRAREKAIHHAIERFKNKPI-QTIKKHDYQRFVNDISIQ--------- 121 Query: 108 VTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES---------RTIPDP 158 S V++ +T+ N +F++ D + P +GI K+ Sbjct: 122 -----YSKNYVDSIVTSTNMIFKYAYDMKLIRILPSEGIKRPKKKVSVEELEDTEIHKKF 176 Query: 159 LSREEFIRLIDACRNQQA----KNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNL 214 L ++E + ++ +N + ++ YTG+R GEL AL W DID +N T+ I + Sbjct: 177 LEKDELFQFLEIAKNHHSPQNSFEVFYTLAYTGMRAGELLALKWSDIDFENNTINITKTY 236 Query: 215 A-------KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRT 267 + + PKT+ + I + I L++ + Sbjct: 237 YNPNNNKKQYQILTPKTE-SSIGKISVDPHVIKLLKNYK-----------VDVQDTWKNE 284 Query: 268 EKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGL--RHRKSYQSRHTYACWS 325 FVF G + ++ A +K+ + + ++ RHT+ Sbjct: 285 LYVDNNFVFTDV-------NGYPLVIKKLQLWIKAILKKTNITNKQISTHSFRHTHCALL 337 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTM 377 + AG + I ++ H D +Y K + + + + + Sbjct: 338 IEAGVHIKEIQERLRHKDINTTMNIYAKITNSYKKDASQKFSKLMENVSKDL 389 >UniRef50_C9A1I5 Phage integrase n=20 Tax=Enterococcus RepID=C9A1I5_ENTGA Length = 383 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 120/358 (33%), Gaps = 49/358 (13%) Query: 30 KFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKL 88 K + ++ +T +EL + +L V +++ T R I+ ++L G+ L I Sbjct: 58 KGSKKKRTITFQELYDDWLEQHRKSVKSSTVATNRRFIEGHVLPKFGKLKL-DQITVSFC 116 Query: 89 LEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISP 148 + E Y+ + V +GV + NP K Sbjct: 117 QKCVNEWHDKYKQY----------------HYIRRATAQVMNYGVSMELMESNPMKKTIL 160 Query: 149 L--KESRTIPDPLSREEFIRLI---DACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDL 203 KE P+ S++E + N + + + TG+R E L +D+++ Sbjct: 161 PRKKEEEKKPNFYSKDELHEFMTFVKTLDNYKYYAFFRLLAITGMRKSEALGLYIKDLNI 220 Query: 204 KNGTMMIRRNLAKDRF-----TVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIID 258 N T+ I + +A D + PKT+ + R I L I L+ ++ + Sbjct: 221 FNKTLTIGKTIAIDEYDQVVLQTPKTKN-SYRTISLDDETIRILQKWFSIQKED------ 273 Query: 259 VHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAG-----LRHRK 313 + + G + +F + + I D +A L+ Sbjct: 274 --YFKLGFNTSKAKQLMFSNMSNDL-------YYPQVINDWLDWIYDKAEKEGLTLKRIS 324 Query: 314 SYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + RHT AGA + ++GH D + +Y + L L Sbjct: 325 PHGFRHTACSLMFEAGATINEVQKRLGHKDVKTTMNIYSHVTPQQAENTSQKLANYLG 382 >UniRef50_C6WDZ8 Integrase family protein n=6 Tax=Actinomycetales RepID=C6WDZ8_ACTMD Length = 437 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 73/411 (17%), Positives = 141/411 (34%), Gaps = 55/411 (13%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKE--TEVAKTSLN 61 R V + V D + R+ + +A Q+ T++ + +L V++ + + Sbjct: 41 RRHVRGKNQDEVSDKVSKLERMRDQGRVTKAGQNWTVETWLKHWLENIVAPPVVSENAYS 100 Query: 62 TYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTG-YQIPKSNYIVTQPGRSAVTVNN 120 Y ++ +L I +L++++ E L Y+ P S+ T + Sbjct: 101 AYEVAVR--------VHLVPGIGAHRLVKLQPEHLEKLYRAIMRKSTKFGPTTSSSTAHQ 152 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 + A V +L +NP K T +P S ++ L+ ++ W Sbjct: 153 VHRTIRAALNVAVRRKHLTENPALEARAPKLEETEVEPYSVDQVKALLVTALKRRNSARW 212 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQ--------------- 225 +++ G+R GE L W+D+DL+ GT+++RRN + ++ T+ Sbjct: 213 AIALALGLRQGEALGLRWQDVDLEVGTLVVRRNRLRPKWRHGCTEPCGKKHGGYCPQRVA 272 Query: 226 ----------AGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFV 275 A R + L + LR + +E + + Sbjct: 273 LREETAGTKSAAGKRGMGLPDELVRLLRVHRDVQARERERAAE----------------L 316 Query: 276 FQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFI 335 + G S W + A + + + +RHT A L G + Sbjct: 317 WTDTGYVFTTPTGGPLNPRSDYDEWKRLLDIAKVPDGRLHDARHTAATVLLLLGVPERTV 376 Query: 336 ANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFA--PTMPHNEAMK 384 MG ++ M + Y + + L E A PT P +E + Sbjct: 377 MGIMGWSNTAMAAR-YQHVTAAIRLDVAQRVGGLLWEPAEKPTEPRDEGEE 426 >UniRef50_A7N7U1 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7N7U1_VIBHB Length = 341 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 93/347 (26%), Positives = 162/347 (46%), Gaps = 20/347 (5%) Query: 25 SRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSIN 84 ++ ++ + +T+ + +KFL ++ V ++ + + + G + ++ Sbjct: 8 AKAAKEIDMSNSQITVTQYIKKFLHSRKFAVKPSTFISEKCKANKLTRYFGSTPI-DAVR 66 Query: 85 KEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFK 144 ++E+ EL S ++N ++T L AVF +G + NP Sbjct: 67 HSDIIEMLDELHER--------------YSNKSINEFLTILRAVFLRAERDGVVDRNPMN 112 Query: 145 GISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLK 204 GI LK + IP+P +++E +L +Q KN + VYTG+R EL AL WEDID + Sbjct: 113 GIKNLKAIKPIPNPFTKKELSQLHQTLGCEQGKNAVELDVYTGLRISELLALSWEDIDWE 172 Query: 205 NGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY 264 N +++RR + KT+ + R + L + AI AL+ Q LT + I V + Sbjct: 173 NRVLLVRRAKVLQSYKTTKTKE-STRKVELNELAIQALKRQWALTGQLEAVKISVLQDDN 231 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACW 324 +++ VF + + + F + A +++AG+ HR Q RHT+A Sbjct: 232 KSYIEERVHIVFYNSQTNQPFLHAAQFN----NTFFRAFLEKAGVAHRGVGQLRHTFASQ 287 Query: 325 SLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 +LTAG +IA QMGHAD M+ YG+W+ ++ ALL + Sbjct: 288 NLTAGIAKDWIAMQMGHADTSMIDDHYGQWIPADSPNYSALLLKSME 334 >UniRef50_C1XF66 Site-specific recombinase XerD n=4 Tax=Meiothermus RepID=C1XF66_MEIRU Length = 374 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 69/373 (18%), Positives = 124/373 (33%), Gaps = 49/373 (13%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKE--TEVAKT 58 G R V A+ P L + E E++ + + + Sbjct: 40 GRTRREV-------AEALARLLP---RAGYGLIQPTRLRLGEWLERWADERARSKGLRPS 89 Query: 59 SLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 ++ YR + L + L + + + S T Sbjct: 90 TVQNYRNY----------QQLLKPLAATPLTRLSPLAIRARFAELAE-------LSPSTR 132 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE-SRTIPDPLSREEFIRLIDACRNQQAK 177 + L A + V G L NP + P + P +RE+ + A + + Sbjct: 133 RHLYQFLRAALRDAVRVGLLEANPMDAVDPPTGGTVRPPRAWNREQVSAFLAAAQGHRLY 192 Query: 178 NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKP 237 ++ V + TG+R GE AL W+ D + + IR L K R P G++ I+L Sbjct: 193 PMFYVMLTTGLRIGEAMALRWQ--DWQGEKLWIRHTLTKQRTLGPTKTLGSSAPIYLDLA 250 Query: 238 AIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIR 297 L T + +F EV G + ++ Sbjct: 251 TQTILSEHRTRQAEERATA----------KRWLDHDLIFPSEV-------GTPLSYRNVM 293 Query: 298 QMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 + + A ++A + + RHTY +L AG +P +A+++ H D + ++Y E Sbjct: 294 RTFQALTEQAKVPRIGLHGLRHTYTSMALQAGLSPKQVADRLRHKDPALTLRIYQHLQEE 353 Query: 358 NNNAQVALLNTQL 370 + L+T L Sbjct: 354 DRRQAALNLDTLL 366 >UniRef50_C4RQM1 Phage integrase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RQM1_9ACTO Length = 477 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 111/356 (31%), Gaps = 49/356 (13%) Query: 34 ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 T+ +L+ + ++L +Y +++ L + + +L ++ Sbjct: 80 TSDTWTVSRWLRYWLSTN-LGIRPSTLRSYTDHVEH--------QLIPHLGRHRLTDLTN 130 Query: 94 ELLT-GYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 +T + + T++ L + + +G L DNP + + K Sbjct: 131 LHVTATFAHIAETPNRHGRPPTPSTLHRIRATLRSALNAAIRHGLLRDNPARFVRLAKPR 190 Query: 153 RTIPDPLSR--------------------EEFIRLIDACRNQQAKNLWCVSVYTGVRPGE 192 R + ++ +D + + +W + G+R GE Sbjct: 191 RPQARVWTDHRVKAWRDHGERYAVAVWTTQQLAHFLDHTADDRLTAMWWLISLRGLRRGE 250 Query: 193 LCALGWEDIDLKNGTMMIRRN---LAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLT 249 L W D+DL + I + + P A + R I L + LR Sbjct: 251 AAGLRWVDVDLTGRVITIDQQRIAYGQTVTVGPPKTAASRRTIALDHTTLTILRQHRRRQ 310 Query: 250 RLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGL 309 TE+ + + + G D + + + + +GL Sbjct: 311 ----------------LTEQTEHAADWTDSGYVFTQPDGQPLHPDYLTRRFRRLVTESGL 354 Query: 310 RHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVAL 365 + + RH A + +AGA+ + Q+GH + Y + + + Sbjct: 355 PPVRLHDLRHGAATLAHSAGADLKTVQEQLGHTSIVLTADTYTSVLLDLHFTVAEA 410 >UniRef50_B0TI08 Phage integrase family protein n=14 Tax=root RepID=B0TI08_HELMI Length = 368 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 63/380 (16%), Positives = 131/380 (34%), Gaps = 68/380 (17%) Query: 15 VFDYAKQFPSSRNLEKFGEARQ------------------DLTIKELAEKFLALKETEVA 56 F Y ++R +K G A++ D+ + E ++ +T + Sbjct: 15 AFRYKDWTGTTRQHKKRGFAKKSDAVQYERDFIKKQSGGCDMAFGSMVELYMEDCKTRLR 74 Query: 57 KTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSA 115 T+ + +I IL + + + ++I + + + LL + S Sbjct: 75 PTTYEGKKYLIDSKILPVFKDMPV-NAITPATVRKWQNGLLDD-----------ESDYSP 122 Query: 116 VTVNNYMTNLNAVFQFGVDNGYLADNPFKGI-SPLKESRTIPDPLSREEFIRLIDACRNQ 174 + L+A+F + L NP S K++ + +EF A ++ Sbjct: 123 TYLKTINNQLSAIFNYARRYYGLQTNPAAVCGSIGKKNAESMQFWTTDEFRLFAAAISDK 182 Query: 175 Q-AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK----DRFTVPKTQAGTN 229 + ++ +TG+R GEL AL DID ++ + I ++ A+ D + PKT + Sbjct: 183 PASYAIFNTLFWTGMRSGELLALTLNDIDFESKKISITKSYARVGNEDVISPPKT-PKSR 241 Query: 230 RVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGD 289 RVI + ++ L+ + + +F Sbjct: 242 RVITASEFLLEILKDY-----------------AGRLVDYEPSDRLFDYTKHFLASE--- 281 Query: 290 HFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQ 349 K +G++ + + RH++A + G +P I+ ++GH + Q Sbjct: 282 ----------MARGCKLSGVKKIRIHDIRHSHASLLIELGFSPLLISERLGHESVETTLQ 331 Query: 350 VYGKWMSENNNAQVALLNTQ 369 Y + L+ Sbjct: 332 TYAHLYPNKHGEVADKLDAL 351 >UniRef50_C7H2F1 Prophage LambdaCh01, site-specific recombinase, phage integrase family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2F1_9FIRM Length = 475 Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 72/403 (17%), Positives = 128/403 (31%), Gaps = 79/403 (19%) Query: 19 AKQFPSSRNLEKFGEARQDLTIKELAEKFL-ALKETEVAKTSLNTYRAVIKNILSIIGEK 77 A F + +A + + +L E++ E ++ ++ YR ++ I + +G+ Sbjct: 56 ADAFEQEVHAGVLLDA--SMKVDDLIERWFTEYAEKKLKPKTVYNYRRLVPRISAGLGQL 113 Query: 78 NLASSINKEKLLEVR-----------------KELLTGYQIPKSNYIVTQPGRSAVTVNN 120 + + L+ LL K I G T+ N Sbjct: 114 KVC-QVKPAHLMAFYSNLEEQGVREDSTYTATPALLERLPHGKRGQIAKAAGIGDDTMRN 172 Query: 121 --------------------------------------------YMTNLNAVFQFGVDNG 136 Y L++VF V G Sbjct: 173 VYRGANVSQSTAEKVVRVVGLPLSKAFTEHVKDGGRLNGNTVQHYHRMLSSVFTKAVQWG 232 Query: 137 YLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRN--QQAKNLWCVSVYTGVRPGELC 194 + +NP K K L ++ RL++A ++ Q + ++++TG R E+C Sbjct: 233 LVPENPCKRAEAPKAEEIDVQALEEKDVARLLEALQDAPAQFSVITQLALFTGARRSEIC 292 Query: 195 ALGWEDIDLKNGTMMIRRNLAK-----DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLT 249 L W D+DL GT+ I RN+ FT PKT+ + R I + + LR Sbjct: 293 GLRWCDVDLDAGTLSIERNVQYIPGKGTVFTTPKTK-RSRRCIKIGPECVQLLREYRQHQ 351 Query: 250 RLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGL 309 R + + R K K G ++ + + L Sbjct: 352 RAERLRMGTAWVRRVEIAGKM------VENDLLFTKWNGAPIDPKTVTTWFPGFLAAHDL 405 Query: 310 RHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYG 352 + RHT A + A ++ ++GHA +Y Sbjct: 406 PPVHFHSLRHTNASLLIAAHVPVTAVSGRLGHAKTSTTTDIYA 448 >UniRef50_C7GI02 Site-specific recombinase, phage integrase family n=12 Tax=Bacteria RepID=C7GI02_9FIRM Length = 431 Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 77/410 (18%), Positives = 151/410 (36%), Gaps = 41/410 (10%) Query: 1 GELRSS--VCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKF--LALKETEVA 56 G L V K+ +Q +KF +LT+ +L + + LK ++ Sbjct: 24 GNLVQKECVGTESKSETEKLLRQAMDDYEKKKFVAKADNLTVGQLLDVWAEEELKTGTLS 83 Query: 57 KTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAV 116 ++ Y I+NI + ++ E L L G P + G S Sbjct: 84 NGTVENYLGTIRNIKKHPLAERKLKNVTSEHLQSFFDLLSFGGVHPDGKE---RKGYSKD 140 Query: 117 TVNNYMTNLNAVFQFGVD-NGYLADNPFKGISPLKESRTI-----------PDPLSREEF 164 ++++ + F+F V Y+ NP + I ++ + P+SRE++ Sbjct: 141 YIHSFSAVMQQSFRFAVFPKQYITFNPMQYIKLRYQTDEVDLFSDEDMDGNVQPISREDY 200 Query: 165 IRLIDACRNQQAKNL--WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD----R 218 RL+ + + + ++ Y G+R GE C L W+D++L+ + IRR++ D + Sbjct: 201 ERLLAYLQKKNPAAILPIQIAYYAGLRIGEACGLAWQDVNLEEQCLTIRRSIRYDGSKRK 260 Query: 219 FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQP 278 + + T+ RV+ ++ R+ ++ +++ Y + K+K ++ Sbjct: 261 YIIGPTKRKKVRVVDFGDTLVEIFRNARKEQLKNRMQYEELYHTNYYKEVKEKNRVYYEY 320 Query: 279 E---------------VSARVKNYGDHFTVDSIRQMWDAAIKRA-GLRHRKSYQSRHTYA 322 ++ G ++ + K G +Q RHTY Sbjct: 321 YCLDRTQEVPADYKEISFVCLRPDGCLELPTTLGTVCRKVAKALEGFEGFHFHQLRHTYT 380 Query: 323 CWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 L GA P + +GH+D VY + V LL+ + Sbjct: 381 SNLLANGAAPKDVQELLGHSDVSTTMNVYAHSTRDAKRKSVRLLDKVVGN 430 >UniRef50_A0AGT2 Complete genome n=7 Tax=Bacilli RepID=A0AGT2_LISW6 Length = 386 Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 127/348 (36%), Gaps = 39/348 (11%) Query: 34 ARQDLTIKELAE-KFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVR 92 + +T +E +F+ E +V + + + + + + I+ + + + Sbjct: 67 SASQMTFEEFYRIRFVNWYEKQVKSQTFENAQFIFEKKMEYFYRMRIRD-ISSQDIEDWM 125 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 EL S +N + +L + V G + NP +S + Sbjct: 126 HELSQTATRNSRKQEEITT-LSRTYINRILGHLRIILNRAVKEGLIERNPVDSVSYFPKE 184 Query: 153 RTIPDPLSREEFIRLI-----DACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGT 207 + EEF +++ ++ +NQ K ++ + YTG+R GEL AL WE+++ + Sbjct: 185 NNKVEFWEIEEFQKVMAMIPENSIQNQHRKIIYEMLFYTGLRIGELQALSWENVNFEKNQ 244 Query: 208 MMIRRNLAK-----DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFR 262 + + + L F+ PKT + R I + K L+ L R+ Sbjct: 245 ITVEKTLIYQGKNDWYFSTPKT-NKSYRTISIGKTLSKRLKKWQELQRMIGNFEYMSQL- 302 Query: 263 EYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYA 322 G S + ++AG+ K + RH++ Sbjct: 303 ------------------------DGTFTPSYSFSNWLKDSARKAGVIPIKLHALRHSHV 338 Query: 323 CWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQL 370 + P I ++GHA+ Q+ YG +++++ V +L+ + Sbjct: 339 ALLIDQNIQPLVIQERLGHANIQITLGTYGHLYAKSDSQVVDVLDKII 386 >UniRef50_C9NE73 Integrase family protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NE73_9ACTO Length = 548 Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 116/346 (33%), Gaps = 39/346 (11%) Query: 33 EARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVR 92 EA + T+ +LA K + +++ YR ++N +L + KL ++ Sbjct: 166 EADPNQTVAAYLATWLAAKALVLKPSTMARYRDYVRN--------DLIPAFGTLKLDQLA 217 Query: 93 KELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKES 152 + + + G T+ + L++ V L P + Sbjct: 218 NRHIAAFVTSQLAV-----GCGRTTLYRCLATLSSALGDAVRQQRLPRTPASPPVLHRPP 272 Query: 153 RTIPDPLSREEFIRLIDACR--NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 + EE R + C + + +L+ V + TG+R GE L W D+ L G + I Sbjct: 273 SPERRIWTAEEAARFLTHCHQTDPEMADLFEVLIGTGMRKGEALGLHWNDVHLDQGVLYI 332 Query: 211 RRNLA-----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 R L+ + T PKT+ + + + A + R +G Sbjct: 333 RCTLSAVDNNRLVLTTPKTR-SSRGWVAISPRVAIAF-RHRARSAP----------RAHG 380 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWS 325 + VF + G + + AG+ + RH A + Sbjct: 381 DADDPFAGLVF-------CRPDGRPLGPHLVLDRLHRLSEEAGVPQVTVHDLRHLAATIT 433 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 ++AG ++ + H+ +Y + + V ++ LS Sbjct: 434 ISAGVPLTVVSKTLRHSTLSTTANLYSHLTQQAAHQAVDTIDHVLS 479 >UniRef50_D1VST0 Phage integrase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VST0_9FIRM Length = 360 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 69/374 (18%), Positives = 127/374 (33%), Gaps = 46/374 (12%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLN 61 L K G + RN + ++ K L + +L + + + +L Sbjct: 21 NLDGETKQKKKEGFSTKKEADEYERNFLNNIKFNPEMNFKSLYKMYLEDMKPRIKEHTLA 80 Query: 62 TYRAVIKN-ILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 + + +N IL + + S I ++ + LL + T + + Sbjct: 81 SKEYITENKILPYFKDMKI-SGIGSIEVQRWQNLLLQ------AKNPKTNKPYAPTYLKT 133 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESR-TIPDPLSREEFIRLIDACRNQQAKNL 179 L A+F + V L +NP + + E + S EEF I+ ++ Sbjct: 134 INNQLTAIFNYAVKFHNLKNNPVHKVGTIGEKNAPEKEIWSIEEFNEFINLVEDKTLHLG 193 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK----DRFTVPKTQAGTNRVIHLI 235 + + ++G R GEL AL W DID KN + I ++ + D T PKT+ + R I ++ Sbjct: 194 FNILYWSGCRIGELLALTWNDIDFKNNIINIDKSYQRLNCKDVITEPKTKK-SIRKITVV 252 Query: 236 KPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDS 295 I + S L + +F T Sbjct: 253 SDVIKEIESYKKL-----------------FYKPGDDDRIFNC-------------TKHK 282 Query: 296 IRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM 355 KR L+ + + RH++A L G N ++ ++GH Y + Sbjct: 283 FEHAIINICKRNNLKRIRIHDLRHSHASLLLNEGINIVALSKRLGHEKVSTTLNTYSHMI 342 Query: 356 SENNN--AQVALLN 367 + + L+ Sbjct: 343 PSEDKILNVMEKLS 356 >UniRef50_UPI0001C37D82 integrase family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37D82 Length = 339 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 69/338 (20%), Positives = 139/338 (41%), Gaps = 28/338 (8%) Query: 36 QDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKEL 95 Q T++E E++L + + T+ Y + +N ++ + +L ++ +E Sbjct: 24 QKFTLREWNERWLNIYCKAIKTTTKEAYISYTEN--------HINRVLGDIELCKLSRED 75 Query: 96 LTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI 155 + + S I + S ++ N L+ VDNGY+ NP K K ++ Sbjct: 76 VQLFLNSLSLGIGLEKALSPKSIKNIHGILHKSLDVAVDNGYILANPAKKNDLPKIKKSE 135 Query: 156 PDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 LS EE + + A + Q + L+ ++++TG+R GE+ L W+ I+ + G + + R L Sbjct: 136 VHALSVEEIKKFLIAIKGCQMEYLFKITLFTGMRAGEIMGLTWDCINFEEGYISLYRQLV 195 Query: 216 KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFV 275 + PK+ +L++ + ++++ F+ EK+ FV Sbjct: 196 R--IKNPKSDNYYY--------TFSSLKNGRSRRLYPPMFVMNMLFKM---KEKKTSDFV 242 Query: 276 FQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFI 335 F + +HFT +I + G+ + + RHTYA S+ + + + Sbjct: 243 FCNSEN-------NHFTHSAIYNSLKRITGKIGITDFRFHDLRHTYATISIRSDVDTMTL 295 Query: 336 ANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEF 373 MGH A VYG + ++ +++ Sbjct: 296 KENMGHHSAAFTLDVYGHCDRRMKLEGTSKIDRFITDN 333 >UniRef50_C4ZBA5 Phage integrase family protein n=10 Tax=Firmicutes RepID=C4ZBA5_EUBR3 Length = 363 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 58/375 (15%), Positives = 133/375 (35%), Gaps = 58/375 (15%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK 68 +A K ++ ++F S A ++ + + + K E+ + ++ + +I+ Sbjct: 39 FATKKEALEWEREFLKS------TSANMEMMLGAFVDVYFQDKAGELKERTIKNKQYMIE 92 Query: 69 -NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNA 127 ++L K + + I +++ + E+ G S + + A Sbjct: 93 AHVLPYFANKRM-NEITPSDIIQWQNEM-------------RAKGYSQTYLRMVQNQITA 138 Query: 128 VFQFGVDNGYLADNPFKGISPL-KESRTIPDPLSREEFIRLIDAC-RNQQAKNLWCVSVY 185 +F + L +NP K + + K + ++ E+ I + + ++ + + Sbjct: 139 LFTHACNIYNLGNNPCKKVKKMGKADADKLNFWTKAEYDSFIRGIDKESRYFVIFEILFW 198 Query: 186 TGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHLIKPAIDA 241 TG R GE+ AL DID +N + I + + T PKT+ + RVI + + Sbjct: 199 TGCREGEMLALTKSDIDFENNQISITKTYYRTERRDIITTPKTEQ-SIRVIDIPEFLKKE 257 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWD 301 + + + ++++ Sbjct: 258 IEAYVNRCY------------------------------GLPDNERLFPIVAEAVQHKLK 287 Query: 302 AAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNA 361 ++G++ + + RH++ + + G P I ++GH D ++ YG Sbjct: 288 RECAKSGVKQIRVHDLRHSHVAYLINQGVQPLIIKERLGHRDIKITLNTYGHLYPNQQKK 347 Query: 362 QVALLNTQLSEFAPT 376 +LN +E AP Sbjct: 348 VADMLNATRNENAPA 362 >UniRef50_B3WDC1 Integrase n=3 Tax=root RepID=B3WDC1_LACCB Length = 394 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 73/393 (18%), Positives = 133/393 (33%), Gaps = 55/393 (13%) Query: 10 AIKTGVFDYAKQFPSSRNLEKFGEARQ-------------DLTIKELAEKFLALKETEVA 56 + + + FP+ + ++ + + + + +++ + V Sbjct: 27 QTGKEIKIHRRGFPTEKIAQQEATLAEAEIIKGHSHYQTERILMADYLNQWITKLKVNVK 86 Query: 57 KTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSA 115 + S+ YR +K I+ IG+ LA KE E L G S Sbjct: 87 EGSMIIYRYNLKKYIIPKIGDIRLAKYTLKEH-QEFISSLFND-------------GLSL 132 Query: 116 VTVNNYMTNLNAVFQFGVDNGYLADNPFKGIS---PLKESRTIPDPLSREEFIRLIDACR 172 TV L+ + V GY+ NP G+ K++ ++++ I+A Sbjct: 133 NTVKLINGTLHNALKKAVAIGYITKNPTVGVEFSAYAKDNSKKLHFWTKDQVGSFIEAAE 192 Query: 173 NQQ---AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA----------KDRF 219 + + + + G+R GE AL W DID T+ + K Sbjct: 193 EDKEPMWLSFFVTLIDCGLRVGEAMALRWSDIDFSKNTLSVNATRIYRAETGSNAGKIAL 252 Query: 220 TVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPE 279 PKT + R ++ D L+ Q H + + + + FVF Sbjct: 253 DRPKTL-SSKRTEYMTARVNDLLQQQYER------HFSHGNVQGFRFSTSHNNDFVFTYS 305 Query: 280 VSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQM 339 A +G + ++ RAGL H + + RHT+A AG + I + + Sbjct: 306 SDA---KFGQPLRSRATTGAFNRITNRAGLPHIRIHDLRHTHAVLMREAGLSLDDIKDDL 362 Query: 340 GHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 GH D Q+Y + L++ Sbjct: 363 GHKDISTT-QIYAEISPAKKKENHQQFEKYLNQ 394 >UniRef50_C0X0P7 Phage integrase family site specific recombinase n=4 Tax=Enterococcus faecalis RepID=C0X0P7_ENTFA Length = 369 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 70/347 (20%), Positives = 132/347 (38%), Gaps = 58/347 (16%) Query: 39 TIKELAEKFLALKETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELLT 97 T+ E E++L + + EV ++ +Y + +L +G+ L + I+ +L ++ ++L+ Sbjct: 67 TLNEWIEQWLVIVKKEVKLSTFASYSYKLSNYVLKTMGDSAL-NEIDDLRLNKLVEDLIA 125 Query: 98 GYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPD 157 G S T+ L+ V +L NP IS K R Sbjct: 126 -------------QGLSKSTICVIFGILSRALNHAVKAKHLKSNPCSTISLPKPKRRHIR 172 Query: 158 PLSREEFIRLIDAC-RNQQAKNL-WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA 215 L EE +L + +N Q + L V+++TG+R GEL AL WEDI+ K T+ ++ Sbjct: 173 ALDIEEQKKLENVAYKNPQQQGLSVIVALHTGLRIGELAALRWEDINFKKDTIHVKHTFQ 232 Query: 216 KD-----------RFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREY 264 + + KT + R+I + +AL+ Q ++ Sbjct: 233 RVSVSSFGESTQLYYDCTKTIN-SERIIPMSNTVKNALKCQKEHSQ-------------- 277 Query: 265 GRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACW 324 FVF + + + L +Q RHT+A Sbjct: 278 -------GKFVF--------SRNNKPCEPRLLTYYFHKLRDKVQLDKVHFHQLRHTFATR 322 Query: 325 SLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 L + ++ ++ +GH+ QM +Y + E + + ++ Sbjct: 323 CLESTSDIVSVSALLGHSSTQMTLDIYADSLLEQRIKAIKRMERTIA 369 >UniRef50_A1WV14 Phage integrase family protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WV14_HALHL Length = 384 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 83/373 (22%), Positives = 140/373 (37%), Gaps = 46/373 (12%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEA-------RQDLTIKELAEKFLALKETEVAKTSLN 61 I+ G FDYA FP+SR L + D A ++ L + ++ Sbjct: 48 AEIEMGTFDYAAWFPNSRKLAEAQRWLREQGSRAPDQRFGPYAWQWYQLHLGDWKESYAR 107 Query: 62 TYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 V++ ++ GE L I + + R ELL + S +N Sbjct: 108 RVCGVLEGYLIPHFGEWPL-DQITERAVRAFRHELLE------LTNARGERRLSNARINF 160 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 +T L V +F + P + I PL++ R P PL+ E+ + A + + Sbjct: 161 ILTPLAGVMRFAESELGIEH-PMRQIRPLRDDRDDPMPLTAEQVHAFLAAV-DPDYYLYF 218 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAID 240 + YTG+R E+ L +DL+ + +R R T K T R I L Sbjct: 219 KLRFYTGLRSCEVDGLKVCYVDLERRQLRVREARVDGRQTTLK-HRKTRRDIPLSPGLAA 277 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI-RQM 299 L + +Q +VF ++ G + Q+ Sbjct: 278 ELDRHI--------------------RGRQGDDYVFT-------RSDGRPLHPSWVAEQV 310 Query: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 W +K GL R+ YQ+RHT A L AG NP F++ +GH+ +M+F+ Y +++ Sbjct: 311 WKPTLKALGLAPRRVYQTRHTAAVLHLAAGENPLFVSRLLGHSSTKMLFERYAPFVANAL 370 Query: 360 NAQVALLNTQLSE 372 + ++ Sbjct: 371 GDDGSAFEAMMAS 383 >UniRef50_B5H9T3 TraSA integrase fusion protein n=4 Tax=Streptomyces RepID=B5H9T3_STRPR Length = 372 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 67/388 (17%), Positives = 133/388 (34%), Gaps = 58/388 (14%) Query: 12 KTGVFDYAKQFPSSRNLEKFGEA--------------RQDLTIKELAEKFLALKETEVAK 57 ++A+ F + +++ + KE AE++ A++ Sbjct: 18 DLDGKEHARHFDRKIDAQRWIDEVTASLVTGQYVDPRSAKKPFKEYAEEWRAIQPH--RP 75 Query: 58 TSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVT 117 ++ ++ + EK +I + L T + G +A T Sbjct: 76 STAKAVAQHLRCYVYPAWEKRSLGAIKPGDVQSWVTSLTTTH------------GLAAST 123 Query: 118 VNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAK 177 +NAVF+ V + + NP R PL+ E+ L D + K Sbjct: 124 SRTVFNTVNAVFRAAVRDRMIPHNPCAEAKLPSVPRKKIVPLAVEQVRTLSDEI-PARYK 182 Query: 178 NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK----DRFTVPKTQAGTNRVIH 233 L + TG+RPGEL L +DL + T+ + + + + + P A ++R + Sbjct: 183 GLVLLGAATGLRPGELFGLQLRHVDLLHATVSVEQQIQQTAKHGVYVCPPKTARSHRTVP 242 Query: 234 LIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV 293 L + A+DA+++ + ++F G Sbjct: 243 LPRMAVDAMKAHLR-----------------DFPADGPEGWIFTAPQG------GPVVYT 279 Query: 294 DSIRQMWDAAIKRAGLRHRK-SYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYG 352 + W A +AG+ + RH YA + G + ++ ++GH +A M +Y Sbjct: 280 HFMDGSWRPACAKAGIPKGTGPHALRHHYASLLIRHGESVKTVSERLGHTNAAMTLNIYT 339 Query: 353 KWMSENNNAQVALLNT-QLSEFAPTMPH 379 ++ A ++ + A P Sbjct: 340 HLWPDSEERTRAAVDKAYADQSADAQPQ 367 >UniRef50_C4DIX5 Site-specific recombinase XerD n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DIX5_9ACTO Length = 416 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 111/349 (31%), Gaps = 48/349 (13%) Query: 32 GEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEV 91 T+ +LA + T+ +Y+ I + + + +LA + + L E+ Sbjct: 7 QATGSTWTVTRWLRFWLA-HRQTIRPTTARSYQLHIDLVGPYLDKVSLA-GLTCQHLTEM 64 Query: 92 RKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKE 151 EL + +A T L A + G + N + + Sbjct: 65 FAELA-------ARPNRHGRPCAAGTWQRVRATLRAALNGAIREGLIDRNAARHVELANP 117 Query: 152 SRTIPDPLSRE--------------------EFIRLIDACRNQQAKNLWCVSVYTGVRPG 191 R + + + +R +D + + LW + + G+R G Sbjct: 118 HRPHAVVWTADRVEAWRRTGIRPAVAVWTAAQLVRFLDCVQGDREYVLWSLIAFRGMRRG 177 Query: 192 ELCALGWEDIDLKNGTMMIRR---NLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTL 248 E L W D+DL +M+ + L + +T P + R++ L + + LR Sbjct: 178 EAAGLRWMDVDLDRRQLMVTQQLATLGRAIYTCPPKSRSSRRIVALDRHTVALLREHAER 237 Query: 249 TRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAG 308 R + + + + G D + + R Sbjct: 238 QRREQRAA----------------GYAWHETGYVFTRPDGRPHHPDYLTSRFRILCDRHD 281 Query: 309 LRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 L + + RH A + TAGA+ + Q+GH + Y + + Sbjct: 282 LPPIRLHDLRHGAASLAHTAGADLKTVQEQLGHGSIVLTADTYTSVLPQ 330 >UniRef50_C6VKZ1 Prophage Lp4 protein 1, integrase n=1 Tax=Lactobacillus plantarum JDM1 RepID=C6VKZ1_LACPJ Length = 385 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 77/404 (19%), Positives = 143/404 (35%), Gaps = 78/404 (19%) Query: 5 SSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQ---------------DLTIKELAEKFLA 49 + + KT + + F SS+ + + + + T E+ E +L Sbjct: 24 TDINGNTKTKTYHHG-GFSSSKAAKLAFDRAKVEFDHRKNNPAAIMDNPTFDEVYEVWLK 82 Query: 50 LKETEVAKTSLNTYRAVIKNIL-SIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIV 108 + V +++LN + K+ + G IN + ++E L + K + Sbjct: 83 TYKLGVKESTLNRVEGIFKHHITPSFGGMR----INTITWQKCQEEALKWRESVKQFNKL 138 Query: 109 TQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLK------ESRTIPDPLSRE 162 Q L VF+ G + NP K + K + + + + E Sbjct: 139 AQ-----------YAAL--VFRTAQKMGVITTNPMKLVDVPKIAVDYSKDKAADNFWTAE 185 Query: 163 EFIRLI---DACRNQQAKN------LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRN 213 + + DA + + L+ + TG+R GE AL W DIDLKNG + I + Sbjct: 186 QLATFLAVVDATDGHRTQPRYDRSALFYLLATTGMRKGEALALTWSDIDLKNGLVTINKT 245 Query: 214 LAK-----DRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTE 268 +++ + PKT+ R + L ID L+ Sbjct: 246 ISRSIDNHQIISTPKTRNA-YRTLSLNSSTIDRLKKYRK----------------SLVVI 288 Query: 269 KQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTA 328 + +F + G +V + +A I L + RHT+A + Sbjct: 289 PRAKDLIFTNQK-------GQIMSVMTPNHWLEALIGETDLPTITVHGLRHTFASIQVAN 341 Query: 329 GANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 N + QMGH+D ++ +Y + +AQV ++ L++ Sbjct: 342 NINVKALQMQMGHSDIKITLNIYAHLSQQELSAQVYDMSKILAQ 385 >UniRef50_C2EIM6 Phage integrase n=1 Tax=Lactobacillus salivarius ATCC 11741 RepID=C2EIM6_9LACO Length = 370 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 74/378 (19%), Positives = 141/378 (37%), Gaps = 58/378 (15%) Query: 9 YAIKTGVFD-YAKQFPSSRNLEKFGEARQDL---TIKELAEKFLALKETEVAKTSLNTYR 64 + KT V Y + ++ E E+ D+ T +L + + + V +S + Sbjct: 37 FKTKTEVKKAYQEVKFAAYQGEYRQESNLDVSLRTFGDLYDFWFEQYKNTVRGSSYYVIK 96 Query: 65 AVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 + KN+ + K L +I + +LL + + T Sbjct: 97 KGLDKNVYPYLKNKQL-KNITLIDCQNLFNKLLKTNPGNYV-------------ILSIYT 142 Query: 124 NLNAVFQFGVDNGYLADNPFKGISPLKESRT--IPDPLSREEFIRLIDACRNQQA--KNL 179 + Q+ V + +NP + +E +T + S+EE + + ++ L Sbjct: 143 --KKILQYAVTLKLIPENPMNNVIKPREKKTYGSNNYYSKEELKTFLAYSKKEKFHVYVL 200 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-----KDRFTVPKTQAGTNRVIHL 234 + + Y+G+R GEL AL DID + I + ++ + PKT G NR+I + Sbjct: 201 FRLLAYSGMRIGELLALKVADIDFNTSQISITKTISSDADSRFELHKPKTTTG-NRIISV 259 Query: 235 IKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVD 294 I+ + + + +K+K F+F+ + ++ Sbjct: 260 DPDTINLVSTLIK--------------------DKKKDDFIFRFYGCS------KPYSPR 293 Query: 295 SIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKW 354 ++ + IK+A LR + RHTY +G N I Q+GH+ +M VY Sbjct: 294 TVALWKNKIIKKANLRKISLHGFRHTYTSLLFESGVNIKKIQKQLGHSKVEMTLNVYTHL 353 Query: 355 MSENNNAQVALLNTQLSE 372 NN + + L+ Sbjct: 354 SRNNN-DIGSKFDNYLNN 370 >UniRef50_Q65KE0 Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65KE0_BACLD Length = 381 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 70/371 (18%), Positives = 132/371 (35%), Gaps = 41/371 (11%) Query: 13 TGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILS 72 + KQ + EK AEK+ K+ + +++ YR + Sbjct: 40 REAKEVLKQVIIEVDKEKNSHNPNKSVFSTFAEKWFESKKVRLRSSTIVNYREQL----- 94 Query: 73 IIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFG 132 + N+ + K+ ++ +E+L Y N + + + T+ + V + Sbjct: 95 ---DYNILPYLGTFKIKDITEEVLQHYI----NRLHNERKLAPATIRTAFGVVAEVLKKA 147 Query: 133 VDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDA----CRNQQAKNLWCVSVYTGV 188 G ++ E+R I + +DA + +SV TG+ Sbjct: 148 SRKGAFDLAILDDVNLPPENR-ISKVWNESNVQAFLDARNRIVSLTRYFIGMVLSVITGM 206 Query: 189 RPGELCALGWEDIDLKNGTMMIRRNLAK-------DRFTVPKTQAGTNRVIHLIKPAIDA 241 R GE+ L W DID + G + IR+ LAK KT AG R +HL K I+ Sbjct: 207 RMGEVLGLRWSDIDFEKGYLTIRQTLAKIDDEGNYGLVPEVKTAAG-FRTVHLPKFFIEY 265 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWD 301 L + + KE + + + +G ++ R+ + Sbjct: 266 LIEHKKMVQREKEILGED----------------YIDYDLVVCTKHGKWVHPNNYRRAFT 309 Query: 302 AAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNA 361 I + L RHT+A + ++ G +P + ++GHA + Y + Sbjct: 310 RLIAQLELPKIPPKNLRHTHATYLISIGISPKIVQERLGHAHIKTTLGTYSHVLPSMQAE 369 Query: 362 QVALLNTQLSE 372 V L+ +++ Sbjct: 370 LVGKLDDLVAK 380 >UniRef50_B9E9M6 Integrase n=12 Tax=Staphylococcaceae RepID=B9E9M6_MACCJ Length = 388 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 69/359 (19%), Positives = 126/359 (35%), Gaps = 42/359 (11%) Query: 28 LEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKE 86 LE ++ T +++ ++ TE+ T+L + + K IL G + I++ Sbjct: 56 LENNTQSIHKYTYEDIYLMWIENHRTEIRGTTLASKESKFKSRILPKFGRIPI-KEISRV 114 Query: 87 KLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGI 146 V E N+Y+ VF + + + NP + I Sbjct: 115 YCQTVVNEWSKEM----------------KAFNDYVIQARLVFNYAMKLELIDKNPMEYI 158 Query: 147 SPLKESRTIP------DPLSREEFIRLIDACRNQ---QAKNLWCVSVYTGVRPGELCALG 197 + L++EE + + + Q L+ + +TG+R GE+ AL Sbjct: 159 TLPSRLEDKVFVEQSRKFLTKEELKQFMIYLEEENKTQNTCLFRLLAFTGMRKGEVLALH 218 Query: 198 WEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSK 253 W DI+ N + +++ LAK PKT+ + R I + I L +L Sbjct: 219 WSDINFVNKDLYVKKTLAKVNNKHVLQPPKTRE-SQRWIDIDNQTISKLLQWKEEQKLQY 277 Query: 254 EHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRA-GLRHR 312 E K +F + N + V + +A KR L Sbjct: 278 EEYGFS-------VASDKEQPIFSTYHTRL--NEMKYMRVSTPNDKLEAFFKRHSDLHKI 328 Query: 313 KSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 + RHT+A +GA + ++GH+D + +Y + NT ++ Sbjct: 329 HVHGFRHTHASLLFESGATLKEVQTRLGHSDIKTTMDIYTHITQSSREKLADKFNTYVN 387 >UniRef50_A8FW51 Putative pore-forming cytotoxin integrase n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FW51_SHESH Length = 381 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 80/334 (23%), Positives = 152/334 (45%), Gaps = 21/334 (6%) Query: 40 IKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGY 99 + A+++LA + + A ++ + + +KN++S G+K + S I++ + + ++ + Sbjct: 8 FNDYAKQYLAESKFDKAHSTYVSECSKVKNLVSFFGKKQIRS-ISQSDIKRWKIKVHRRF 66 Query: 100 QIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPL 159 S T+N + T L A+F + + L NP G+ LK P PL Sbjct: 67 --------------SNKTINEHFTILRAIFSCALSDCVLGRNPMTGVENLKIHTAEPKPL 112 Query: 160 SREEFIRLIDA-CRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR 218 REE ++L + + K L + V TG+R EL AL W+ ID ++ + + + Sbjct: 113 GREELLKLHATPAQCESGKALLFLGVLTGLRISELIALTWDCIDFESREIKVHTAKVLGK 172 Query: 219 FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQP 278 + VPKT + R + + + A L+ +T + +I V + EK++ +F Sbjct: 173 YKVPKT-TSSIRTVEMNQHAFALLKKHYEVTGSLRPRVIRVLQNDNKTIEKRRVQHLFIN 231 Query: 279 EVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQ 338 S + ++ + + + +A ++HR Q RHT+A LTAG + +IA Q Sbjct: 232 SQSNKPFIDSKQYS----KTFFTPFLVKASVQHRGPNQLRHTFASQCLTAGISKEWIARQ 287 Query: 339 MGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 +GH MV + Y +W+ + A + + Sbjct: 288 LGHNSTNMVDKHYARWLQSDAPDNAAKYSDAMGS 321 >UniRef50_B1I9D1 Site-specific recombinase, phage integrase family n=15 Tax=Streptococcus RepID=B1I9D1_STRPI Length = 377 Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 73/373 (19%), Positives = 133/373 (35%), Gaps = 40/373 (10%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYR--AV 66 Y K + A+ + S L++ +TI L E K S + Sbjct: 34 YKTKKEAIE-AEHYLRSVELKERF-YGAKITIPILYELLKEEDSINHRKASYINTQDNNY 91 Query: 67 IKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLN 126 K+I + + E + + R+ L + S T+N M L Sbjct: 92 NKHIKDYFSMVDNVGKLTYEDIYQFREHLRQKVAKN------SDKPLSTNTINKIMILLK 145 Query: 127 AVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQA--KNLWCVSV 184 +F G+ GY NP I L +T + +EF + ++ K L+ V Sbjct: 146 KIFDVGLRKGYYTSNPANLIKKLPIEKTKMQFWTVKEFQHFLTLFETEEYNIKLLFTVLF 205 Query: 185 YTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHLIKPAID 240 +TG+R GE AL W+DID + T+ I +++ ++ + KT+AGT R+I + K Sbjct: 206 FTGLRLGEALALTWQDIDFTSNTIHITKSVYVNKGISHVSTTKTKAGTRRII-INKKLSH 264 Query: 241 ALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV--DSIRQ 298 L+ + E F + G T+ +++ Sbjct: 265 ELQQWQQKQKHLLEQ--------------------FTSDSMTLQVFQGSPITITKNAVEN 304 Query: 299 MWDAAIKR-AGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSE 357 + ++R + L+ + + RH++A + G + + ++GHA Y Sbjct: 305 QYKKILERDSTLKKIRIHDFRHSHASLLINQGEDYLVVKERLGHASITTTIDTYSHLYPS 364 Query: 358 NNNAQVALLNTQL 370 L+ L Sbjct: 365 KQKDLADKLDELL 377 >UniRef50_B1BHZ0 Phage integrase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BHZ0_CLOPE Length = 386 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 66/386 (17%), Positives = 144/386 (37%), Gaps = 47/386 (12%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFL-ALKETEVAKTSL 60 R + + K+F RNL+ + + L + +L + +++ Sbjct: 31 RSRKYIYAKTVKELETKVKEF--KRNLDDGLKIDNKEVFQGLFKSWLFNTHLLDKKPSTI 88 Query: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 Y + +N + L SS+ K K+ + ++ Y + + GRS T+ Sbjct: 89 ERYEGLYRNYI-------LNSSLGKSKIKNLNSLVIQEYYNN-----LYKGGRSVSTLKM 136 Query: 121 YMTNLNAVFQFGVDNGYLADNPFKG--ISPLKES---RTIPDPLSREEFIRLIDACRNQQ 175 + F +NGY + I E L+ EE +++ + Sbjct: 137 LHKVIKPFLLFLYNNGYTKKDFGSKGLIKIPTEKINNEEELQVLTLEEQKIFLNSLEGNK 196 Query: 176 AKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----------FTVPKTQ 225 K ++ ++ TG+R GEL L W ++DLK T+ + + + + + PKT+ Sbjct: 197 DKLIFMTALMTGLRLGELLNLKWSNVDLKEYTLKVDKTIKRVKNIETGKTELIEQEPKTK 256 Query: 226 AGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVK 285 + RV+ + + L+ +K I + +++ Sbjct: 257 K-SKRVVPIPLSLVKDLKELKKEQNKTKLLIGE----------------LYKNNDLVFAT 299 Query: 286 NYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQ 345 ++G++ ++I + + A+ +A L +K + RHTYA ++ +GH++ Q Sbjct: 300 DFGNYLDSNNINKRFKKALIKANLEPKKFHSLRHTYATRLFENDVPLKTVSELLGHSNIQ 359 Query: 346 MVFQVYGKWMSENNNAQVALLNTQLS 371 + Y + + + L+ + Sbjct: 360 ITANTYITVLEDEKKKVINQLDNIFA 385 >UniRef50_C9CDR3 Site-specific recombinase n=2 Tax=Enterococcus faecium RepID=C9CDR3_ENTFC Length = 388 Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats. Identities = 59/390 (15%), Positives = 121/390 (31%), Gaps = 58/390 (14%) Query: 8 CYAIKTGVFDY--AKQFPSSRNLEKFGE------------ARQDLTIKELAEKFLALKET 53 + G +Y K F + + + + + E++L Sbjct: 20 VRKDENGKQEYYVKKGFKTEKEAKLHEARKKVEIEDTGYHKPSNDLFITVYEEWLPSYRN 79 Query: 54 EVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPG 112 V +T+ + + + +IL G K++ S I E Sbjct: 80 RVQETTYQRTKDLFRLHILPKFGNKSI-SKITPVHCQNAVNEWA---------------- 122 Query: 113 RSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTI-PDPLSREEFIRLIDAC 171 + + + +F++ + L NP + K + + S EE D Sbjct: 123 LKFKNIKQLKSYSSQIFEYAIFAELLHRNPMANTNLPKREKKENENYFSLEELKAFWDIL 182 Query: 172 RNQ---QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR---------- 218 + + ++ + + TG+R GEL AL W DI + M +R++ A R Sbjct: 183 NKEEPLKHILIFQLLITTGIRKGELAALHWSDIYFEEQLMYVRKSYATIRNEEKNARRKT 242 Query: 219 --FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVF 276 + R++ + I+ L+ ++G K +F Sbjct: 243 VRIQKNTKNISSERILPIDAQTIEMLKIWKKEQARE--------LLQFGINTNTKNQLIF 294 Query: 277 QPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIA 336 + + D + K+ +H + RHT+A L GA+ Sbjct: 295 TYVNAD--GDINQPLHADYSNNILKRLEKKYKFKHVTIHGFRHTHATLLLEGGASIKETQ 352 Query: 337 NQMGHADAQMVFQVYGKWMSENNNAQVALL 366 +++GH +A+ Y + + Sbjct: 353 DRLGHKNAETTLNTYSHVTEKAQRNALEKF 382 >UniRef50_Q72GH2 DNA integration/recombination/invertion protein n=5 Tax=Thermus RepID=Q72GH2_THET2 Length = 392 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 75/361 (20%), Positives = 135/361 (37%), Gaps = 38/361 (10%) Query: 27 NLEKFGEARQDLTIKELAEKFLALKETE-VAKTSLNTYRAVIKNILSIIGEKNLASSINK 85 + LT ++ A +L E E + S+ + + + L + + + + Sbjct: 59 QAKGLLTDPSRLTTRDFALDYLKRLEREGLRPNSIRLAQEELAHALPSLKDPKAHDPLGR 118 Query: 86 EKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKG 145 +L EV+ + + V + G + TVN + L A+F+ + +A NP + Sbjct: 119 MRLQEVKPVHVRA-----AVDRVAEAGYAPRTVNRVLMRLKALFREALRLELVARNPAEA 173 Query: 146 ISP--LKESRTIPDPLSREEFIRLIDACRNQQAKNL---WCVSVYTGVRPGELCALGWED 200 + K +T L +E RL++A ++K++ + + TG+R GE AL W D Sbjct: 174 VRLRLPKGEKT-ARALEPQEVARLLEAAEASRSKDMALLLRLMLETGLRRGEALALQWRD 232 Query: 201 IDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHI 256 IDL+ G + + R+ K R F+ PKT +V L R + Sbjct: 233 IDLEAGELTVWRSWTKARGKGAFSEPKTPTAKRKV---------------PLPRGLLLRL 277 Query: 257 IDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQ 316 R ++ +F D+ +RAGL + + Sbjct: 278 KARREELLERLTPEEVDGLFLVGGV-------KPVDPDAFNHYLRRLAERAGLGRVRVHD 330 Query: 317 SRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPT 376 RHT+A +L+ G ++ ++GHA + VY + E V L L Sbjct: 331 LRHTWATLALSRGVPLEVVSERLGHASPTITLNVYRHLLEEERRGWVLDLEELLYPAPRA 390 Query: 377 M 377 Sbjct: 391 Q 391 >UniRef50_Q2T7M7 Bbp50 n=13 Tax=root RepID=Q2T7M7_BURTA Length = 356 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 86/384 (22%), Positives = 153/384 (39%), Gaps = 45/384 (11%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLN 61 L + I+ G F + FP L + + +++LA + E K++ + Sbjct: 12 RLAIEIRSRIRHGTFSMVEYFPE-------DGTTTSLLLGDWLDRWLAAQRIE--KSTKD 62 Query: 62 TYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 Y IK + + + ++ + + +P + T+NNY Sbjct: 63 GYTTAIKFWKETPRDLGQTRPLGGVSIKSLKTIDIQT-------AVANRPDLTGKTINNY 115 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQ---QAKN 178 ++ L + V + + ++P + P K + PDP S EE +I Q N Sbjct: 116 LSVLRSALSLAVKDKLIVESPADAVPPAKHQKQPPDPFSAEESNSIIACAERSYPGQVHN 175 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPA 238 + +TG+R E+ L W +D +GT++I + + + +T+ R++ L A Sbjct: 176 VTEFWFWTGLRTSEIYGLEWPHVDFASGTLLIAKAFVRGE-QMDRTKTKVARLVILNSRA 234 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 + AL+ Q T+++ VF D F R Sbjct: 235 LAALQRQRAFTQMA-------------------NGRVFHDPRYNEGWADEDAFR----RT 271 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 W+ +KR G+R+R+ Y RH+YA L AG PAF A Q+GH+ +M Y KW+ + Sbjct: 272 YWEPMLKRLGIRYRRPYNMRHSYATAMLMAGMTPAFCAKQLGHS-VEMFLTTYSKWIDGD 330 Query: 359 NNA-QVALLNTQLSEFAPTMPHNE 381 N ++A L +S P + Sbjct: 331 QNDLEMARLERAISSPEPPQAKEK 354 >UniRef50_C7CS77 Predicted protein n=3 Tax=Enterococcus faecalis RepID=C7CS77_ENTFA Length = 377 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 56/345 (16%), Positives = 114/345 (33%), Gaps = 48/345 (13%) Query: 39 TIKELAEKFLALKETEVAKTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLT 97 T K++ E + A V + + + +IL G + + + K + + Sbjct: 68 TFKDVYELWYAQYVNTVKPITAGHTERMFRLHILPEFGNIKI-NKLTKLMCQKAVNKWSK 126 Query: 98 GYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR---- 153 Y +TQ + + V + NP + + K+ + Sbjct: 127 EYSAFHLLKSITQK----------------MLHYAVAQDIIDINPMQYVVMPKKDKTNET 170 Query: 154 TIPDPLSREEFIRLIDACRNQ---QAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMI 210 L E + + Q ++ V +TG+R GEL AL WEDI++ + + Sbjct: 171 KKKQFLELSELKDFLAEAKETLNFQDYLIFRVLAFTGIRKGELYALTWEDINISYKQLTV 230 Query: 211 RRNLAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGR 266 + L + + PKT+A +NR I L + L + + Sbjct: 231 NKTLTRIGKEYIISTPKTKA-SNRTIGLDDTTVSELIVWKKHQKQELLKYGF-------K 282 Query: 267 TEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSL 326 T+ +F + + I + + +K + + RHT+A Sbjct: 283 TKSNDKQLIFH-------RKNNTLHYPEHINFLLSSEMKTS----LSPHSFRHTHASLLF 331 Query: 327 TAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 +GA + ++GH + +Y + + L+ + Sbjct: 332 ESGATIKDVQKRLGHTNVNTTMDIYTHVTKSSERKAIDKLSNYAN 376 >UniRef50_A0QAN7 Site-specific recombinase, phage integrase family protein n=3 Tax=Mycobacterium RepID=A0QAN7_MYCA1 Length = 370 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 69/348 (19%), Positives = 131/348 (37%), Gaps = 33/348 (9%) Query: 34 ARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRK 93 AR LT+++ +LA ++ T+ Y +K + G+ + + K L ++ Sbjct: 48 ARSALTVEQACRDWLAGM-HDIEPTTRAAYTHALKPLRERHGDMAV-QQLTKSHLDQLVT 105 Query: 94 ELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESR 153 +L TG + +A ++N + ++ V V G LA + + LK Sbjct: 106 DLTTGKLDGQKRAW------TANSINPMLNLVSRVLADLVRQGALARDVAAFVKRLKRPE 159 Query: 154 TIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDI----DLKNGTMM 209 + + EE +L+ N + + W +++ G+R GE+C L W D+ D GT+ Sbjct: 160 SKLTTFTEEEVRQLLKHVENDRLGHAWHLALA-GLRRGEICGLEWADVQLDDDRDAGTLT 218 Query: 210 IRRNLA----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 + N + PKT + R + L L+ L + + + + Sbjct: 219 VAHNRVSVGGRVHEKAPKT-VRSARTLPLTPTLARMLKRAKALQAAERLRLGPHYLGDGV 277 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWS 325 R V + G + D++ W A +R + + +RH+ A Sbjct: 278 R---------------VVVDDSGRPYHPDTLSDFWRELCGDAKVRRIRLHDARHSCASLM 322 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEF 373 G A I+ +GHAD + Y ++ N A L ++ Sbjct: 323 HAQGVPIAVISAWLGHADPAFTMRTYVHAENDALNLAAASLQKVVTPS 370 >UniRef50_B6FRP3 Putative uncharacterized protein n=4 Tax=Bacteria RepID=B6FRP3_9CLOT Length = 387 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 71/377 (18%), Positives = 136/377 (36%), Gaps = 44/377 (11%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 R ++ + + + + +++T+ E + +L+ + ++ +Y Sbjct: 40 RQTIYAKT-LNEVRHKLRTEQYNDEKAINVVDKNMTLDEWFDIWLSTCKKNCRSSTKGSY 98 Query: 64 RAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMT 123 K I +G + L S +N + E +L T S I+ Sbjct: 99 ITHYKRIQEELGWRKLTS-LNLIVMQEAFNKLKTDNARKNSKKILVD------------- 144 Query: 124 NLNAVFQFGVDNGYLADNPFKGIS--PLKESRTIPDPLSREEFIRLIDACRNQQAKNLWC 181 + VD L N K I+ KE + L+ E ++ + +NL+ Sbjct: 145 ----MLNRAVDTDLLVKNVAKQINTVIAKEEKKERRVLTIRETELFLEQAKGTFYENLFI 200 Query: 182 VSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK--------DRFTVPKTQAGTNRVIH 233 +++ TG+R GEL AL WEDID K + ++ L KT G R I Sbjct: 201 LALETGLRVGELSALQWEDIDFKKKVIHVKHTLCYFSKNGKYVFEMHDTKTNNGK-RTIP 259 Query: 234 LIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV 293 L AI++L+ Q + + +++ VF + + F + Sbjct: 260 LTAKAINSLKCQKLQKQEI--------ILKGKTAKEEFQNLVFVTKNNQPT----QQFLI 307 Query: 294 DSIRQMWDAAIKRAGLR--HRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 + Q+ + +AG+ + RHT+A ++ G NP + +GH QM +Y Sbjct: 308 NQCMQLVIQNMNKAGIDFSPFTLHTLRHTFATRAIECGMNPKTLQKLLGHGTLQMTMDLY 367 Query: 352 GKWMSENNNAQVALLNT 368 + ++ Sbjct: 368 CHVTEDTLFLEMEKFEK 384 >UniRef50_C4Z3W8 Integrase/recombinase XerC n=7 Tax=Clostridiales RepID=C4Z3W8_EUBE2 Length = 400 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 65/383 (16%), Positives = 133/383 (34%), Gaps = 53/383 (13%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK 68 +A K DY RN + E D+T E + + + V + T ++ Sbjct: 35 FATKREALDY------ERNYKIRQENNLDMTFGEFWKLYTEDVKNYVKLNTWLTKEHIVD 88 Query: 69 -NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNA 127 IL + + I + + + E++ + S L+A Sbjct: 89 TKILPYFRNLKM-NEITPGDVRKWQNEMV-------AFRYENGKCYSQTYKKTMHNILSA 140 Query: 128 VFQFGVDNGYLADNPFKGISPL-KESRTIPDPLSREEFIRLIDA-CRNQQAKNLWCVSVY 185 +F L NP + + +E + + EE+ + +A + + + + Sbjct: 141 IFNHACRFYNLKSNPARQAGNMGREEKKEMLFWTTEEYKKFSEAVIDKPVSFYAFEMLYW 200 Query: 186 TGVRPGELCALGWEDIDLKNGTMMIRRNLAK----DRFTVPKTQAGTNRVIHLIKPAIDA 241 TG+R GEL AL ED D + T+ I ++ + D T PKT +NR I L K + Sbjct: 201 TGMRLGELLALTMEDFDFEKNTVRINKSYQRLQGQDVITTPKT-PKSNRTIKLPKFLAEE 259 Query: 242 LRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWD 301 ++ + ++ +F T + + Sbjct: 260 MQEYFAM-----------------LYDQTPTDRIFL-------------VTKSFLHHEME 289 Query: 302 AAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNA 361 K +G++ + + RH++ + G + IA+++GH + ++ Y A Sbjct: 290 RGCKLSGVKKIRIHDLRHSHISHLIDLGFSAVAIADRVGHESIDITYR-YSHLFPSKQVA 348 Query: 362 QVALLNTQLSEFAPTMPHNEAMK 384 L+ + F ++ ++ Sbjct: 349 MADRLDAVNASFEDCEDQDDDVE 371 >UniRef50_C0C1S7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1S7_9CLOT Length = 384 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 68/379 (17%), Positives = 135/379 (35%), Gaps = 55/379 (14%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQ----DLTIKELAEKFLALKETEVA 56 G +R K G F + +R E+ + D++ +L + + + Sbjct: 43 GRIRQK-----KKGGFRLQR---DAREWERSFINQHEGSLDMSFSDLYSAYFESMKHRLR 94 Query: 57 KTSLNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSA 115 ++L T +IK IL G + + I+ + E + + + S+ Sbjct: 95 DSTLLTKDNLIKTKILPYFGNIPI-NQIDPGAIREWQNIMC-------GQQMNNGKHYSS 146 Query: 116 VTVNNYMTNLNAVFQFGVDNGYLADNPFKGI-SPLKESRTIPDPLSREEFIRLIDAC-RN 173 + L+ VF + V L NP S K+ EEF ++ N Sbjct: 147 TYLKAMNNQLSTVFNYAVRYYNLPSNPCLAAGSMGKKQAGQKTFWKPEEFHIFLEYFSEN 206 Query: 174 QQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR---FTVPKTQAGTNR 230 + ++ + YTGVR GE+ A ++D +L+ GT+ +R++ + R + P + R Sbjct: 207 MEMYLIFSLLYYTGVRIGEMLAFSYDDFNLQKGTVTVRKSYRRIRKTDYITPPKTPKSFR 266 Query: 231 VIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDH 290 VI L I+ L+ +L + +F Sbjct: 267 VIALPAFLIEQLQKYFSL-----------------KEGSGMDERIFSG------------ 297 Query: 291 FTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQV 350 + I + + A + ++ + + RH++A + G +P IA ++GH + + + Sbjct: 298 ISRYHISKFMNEACENTKVKKIRIHDLRHSHASLLIELGVSPVLIAERLGHENVETTLNI 357 Query: 351 YGKWMSENNNAQVALLNTQ 369 Y L+ Sbjct: 358 YSHLYPHRQKELAESLDRL 376 >UniRef50_C3C7W0 Phage integrase n=2 Tax=Bacillus thuringiensis RepID=C3C7W0_BACTU Length = 398 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 71/391 (18%), Positives = 137/391 (35%), Gaps = 56/391 (14%) Query: 8 CYAIKTGVFD--YAKQF---PSSRNLEKFGEARQDLTI-KELAEKFLALKET-EVAKTSL 60 I G FD F R L A T+ E ++L + +V +++ Sbjct: 34 KREISKGGFDSKKEATFHANERERQLFHGMAADSKKTLLSEYLIEWLETYKKGKVGQSTY 93 Query: 61 NTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 ++ I +I+ LA +NK + + L+ G S TV Sbjct: 94 ILHKNNINNHIIPYFQNIKLAD-MNKIEYQKFINHLIN-------------KGYSKRTVE 139 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGI----SPLKESRTIPDPLSREEFIRLIDACRNQQ 175 + ++ + +D + + I + + L++E+ +L++ + Sbjct: 140 IIHSTMSNSIKRAIDLEMVYKDFTNRILIAADHFNQHSKKENYLTKEQVSKLLNTAHKDK 199 Query: 176 --AKNLWCVSVYTGVRPGELCALGWE-DIDLKNGTMMIRRNLAKDRFTV----------P 222 L V TG+R GE AL W+ +IDL N + I R + +T Sbjct: 200 MIYYVLIYTLVETGMRKGEATALEWDTNIDLDNKMIHIDRTINYHAYTPIGQKNSKDLIG 259 Query: 223 KTQA-GTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVS 281 KT+ + R I + + L++ T K + + + + FVF Sbjct: 260 KTKTYDSVRSITISDRLVSVLKTFKTYQNECKLKLGARYDKTF--------DFVFTTT-- 309 Query: 282 ARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGH 341 G +++ + D +K A L + RHT+A L AG +I ++GH Sbjct: 310 ------GKPIPKSTLKNVLDRILKNAELPQIGVHGLRHTHAVLLLEAGVEMKYIQERLGH 363 Query: 342 ADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 ++ +Y + + + + + Sbjct: 364 KSIEITSNIYSHVTPKIIENEQSKYEAYVGQ 394 >UniRef50_C7XQF9 Phage integrase n=1 Tax=Fusobacterium sp. 3_1_36A2 RepID=C7XQF9_9FUSO Length = 351 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 73/365 (20%), Positives = 145/365 (39%), Gaps = 55/365 (15%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIK 68 + K ++ ++F + ++T K L + ++ + KT++ T ++ Sbjct: 37 FNTKREALEFEREFLTQSQFSI------EMTFKSLYSLYHNDMKSRIKKTTMETKEYIVN 90 Query: 69 NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAV 128 + EK I + + + +LL + S + L A+ Sbjct: 91 TKILPFFEKMKVKDIKPIHIRKWQTDLL-------------KMEYSKTYLKTIYNQLTAI 137 Query: 129 FQFGVDNGYLADNPFKGI-SPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTG 187 F + + L NP S K+ LS +EF ++ID +++ K + + +TG Sbjct: 138 FNYAIRFHNLDKNPCHIAGSIGKKDADEMQILSLQEFNKMIDCVTDKENKFFYIILFWTG 197 Query: 188 VRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHLIKPAIDALR 243 +R GEL AL +ED+D +N T+ I +N + T PKT G RVI + ++ ++ Sbjct: 198 MRKGELLALTYEDVDFENKTITINKNFQIVKKERLITDPKTPRG-RRVIAVNDVVLNCIK 256 Query: 244 SQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAA 303 + K +F + + DS+++ D A Sbjct: 257 DLW-----------------NTSYKPNKTDKIF-------------YLSKDSLKRQLDTA 286 Query: 304 IKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQV 363 K+AG+ + + RH++A + L+ G N ++ ++GH Q +Y + + Sbjct: 287 CKKAGVPRIRVHDLRHSHASYLLSNGVNIVILSRRLGHEKVQTTLNIYCHICPSSEDRLN 346 Query: 364 ALLNT 368 +LN+ Sbjct: 347 DVLNS 351 >UniRef50_A6FXR9 Phage integrase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXR9_9DELT Length = 421 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 80/386 (20%), Positives = 142/386 (36%), Gaps = 38/386 (9%) Query: 5 SSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYR 64 + G+FD + + + + + T+ E A +F+A + T T L + R Sbjct: 33 RETRAELMAGLFDEENNHGPNGSGRRKAKPQAVPTLAEFAPEFMAYQATLNKATELASKR 92 Query: 65 AVIK-NILSIIGEKNL----ASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 + +K ++L + G+ L A +I++ K+ ++ E S G T+N Sbjct: 93 SSLKNHLLPVFGDLRLDQIDARAIDRYKMRKLSPEHAATVA---STRRRAGEGLKPKTIN 149 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQ--QAK 177 N++ L+ + G L P I L+ ++ D L EE R + A R Sbjct: 150 NHLMVLSRALRVAQKWGVLDRVP--EIELLRVTKQPFDFLDFEEAERYLAAAREHYPDWH 207 Query: 178 NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK-DRFTVPKTQAGTNRVIHLIK 236 V+ TG+R GEL AL W+ + L T+ + + + + PK +G R + L Sbjct: 208 VFVLVAARTGLRVGELLALQWKHVRLAGRTLRVELSYTRAGGVSSPK--SGKAREVPLTW 265 Query: 237 PAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI 296 AL + G + + VF G+ ++ S+ Sbjct: 266 DVARALEVHREV---------------LGAKARARDALVFPN-------ADGERGSLRSV 303 Query: 297 RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 K A LRH + RHT+A ++ G + +GHA +M + Y Sbjct: 304 GHFVSRIAKAAKLRHVHPHMLRHTFASHAVMRGVPMRVVQEWLGHASIEMTMR-YAHLAE 362 Query: 357 ENNNAQVALLNTQLSEFAPTMPHNEA 382 + + + A T P Sbjct: 363 GIGLDLIDRIAPERDLEADTDPDRNE 388 >UniRef50_Q03L48 Integrase n=30 Tax=Streptococcus RepID=Q03L48_STRTD Length = 388 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 64/385 (16%), Positives = 129/385 (33%), Gaps = 45/385 (11%) Query: 2 ELRSSVCYAIKTGVFDYAKQ--FPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTS 59 ++ + V K + A+Q F N + T +ELA + + V + Sbjct: 30 KVTTKVTARTKKELKTKAQQAQFDFKANGSTRYKEVAIETYEELAISWWDSYKNTVKANT 89 Query: 60 LNTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 + ++ ++L + GE L + + + +L ++ + Sbjct: 90 KRAQKGLLNNHVLPLFGEFKL-DKLTTPLIQSMMNKLANSTNTGEAGAYLHYD------- 141 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPL----KESRTIPDPLSREEFIRLIDAC--- 171 + Q+GV + NP + K+ + + +E + + Sbjct: 142 -KIHALNKRILQYGVVLQVIPTNPANNVVLPRNTQKDKKAKVKHFNNDELKQFLTYLDSL 200 Query: 172 -----RNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKD-RFTVPKTQ 225 +N L+ + TG R E AL W DIDL N + I + L + + PK++ Sbjct: 201 DNSKYKNYYDITLYKFLLATGCRINEALALSWSDIDLDNSVVHITKTLNYEMKLNSPKSK 260 Query: 226 AGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVK 285 +G R I + K + ++ + E Sbjct: 261 SG-YRDIDIDKQTVTMMKRYQHKQTQEAWKLGR-------------------TETVVFSD 300 Query: 286 NYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQ 345 ++ +++ KRAG+ + + RHT+A L +G + +++GH+ Sbjct: 301 FIHEYPNSRTLQSRLGTHFKRAGVTNIGFHGFRHTHASLLLNSGIPYKELQHRLGHSKLS 360 Query: 346 MVFQVYGKWMSENNNAQVALLNTQL 370 M +Y EN V+ L Sbjct: 361 MTMDIYSHLSKENAKKAVSFYEVAL 385 >UniRef50_C4LFZ6 Integrase family protein n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LFZ6_TOLAT Length = 394 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 86/376 (22%), Positives = 148/376 (39%), Gaps = 44/376 (11%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEARQD--------LTIKELAEKFLALKETEVAKTSL 60 I G F++ K FP+S E F + + E AE + K+ E + Sbjct: 47 AQITLGQFNFCKTFPNSSQCEYFHKIAHREELLKAGCPSFAEFAETWYQEKQVEWRTSQR 106 Query: 61 NTYRAVIK-NILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 T R ++ ++L G + + I K ++L R + SA VN Sbjct: 107 ETIRNILDIHLLPSFGLMPV-NHIGKTEILSFRNYVTQ-------LKGRGDKQISASRVN 158 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNL 179 + MT L + + + +K I +K R+ PL+ E RL+ R K Sbjct: 159 HIMTPLRMILNEA-SDRFDFPAVWKQIKSMKVPRSDVMPLTLAEIERLLLVVRKD-FKPY 216 Query: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAI 239 + V +TG+R E+ L W +D + +++ + + KT G+ R + + Sbjct: 217 YTVRFFTGLRSSEIHGLTWRHVDFERCQILVYQAYVRGELISTKTD-GSYREVQMSLRVY 275 Query: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI-RQ 298 +AL +Q ++ ++ FVF V G ++ + Sbjct: 276 EALLAQYKMSGQNRSI----------------DDFVFCSSV-------GTALEDRNVANR 312 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 +W + GL RK YQSRHT A L++G +P +IA Q+GH M+F+VY +++ Sbjct: 313 VWYPLLALLGLEKRKPYQSRHTTATLWLSSGESPEWIARQLGHVSTNMLFRVYSRYVPNM 372 Query: 359 NNAQVALLNTQLSEFA 374 LS + Sbjct: 373 TGRDGTAFEQMLSTSS 388 >UniRef50_B6G0S2 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0S2_9CLOT Length = 376 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 75/380 (19%), Positives = 150/380 (39%), Gaps = 47/380 (12%) Query: 4 RSSVCYAIKTGVFDYA-KQFPSSRNL---EKFGEARQDLTIKELAEKFLALK-ETEVAKT 58 R+ + + KT A KQ + + D++ E EKFL+ ++ + Sbjct: 32 RNKIEKSAKTSNKSEALKQLEKAIEEYYMSEIDFTLSDISFAEAREKFLSEYVANDLKDS 91 Query: 59 SLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTV 118 + Y+ + + E L I + + + + G S V Sbjct: 92 TYTNYKQKLNKPQIKVLEIYLLKDIRAKHIQNIIDYMALN-------------GFSKNMV 138 Query: 119 NNYMTNLNAVFQFGVDNGYLADNPFKGISPL-KESRTIPDP-LSREEFIRLIDACRNQQA 176 N + ++++F F + + DNP + K ++ L+ +E R+++ +N Sbjct: 139 KNTLRTISSLFNFCIRAELIKDNPCDKVVLPSKLTQPERKVALTNKEVKRILNRFKNTHW 198 Query: 177 KNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR-----FTVPKTQAGTNRV 231 + +YTG+R GE C L W+++DL G + +R NL +D+ + PKT+ + R Sbjct: 199 YLSLMLPLYTGMRRGECCGLRWKNVDLDKGIIYVRENLTQDKGKKWIISTPKTK-SSIRT 257 Query: 232 IHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHF 291 I++ P ++AL+ Q+ + + + V++ G Sbjct: 258 INIPLPLLEALKWQLERNKSNNVAT--------------------NSDTHVLVRDNGSII 297 Query: 292 TVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY 351 T D+++ + G++ + RHTYA + GAN ++ +GHA + +Y Sbjct: 298 TNDTLKYLSRVINYDLGIK-FNYHNLRHTYATLLIEKGANIKDVSVLLGHASIKTTMDIY 356 Query: 352 GKWMSENNNAQVALLNTQLS 371 + + +LNT Sbjct: 357 VNNTDNMRDKTLNILNTLYE 376 >UniRef50_B1HWF0 Prophage Lp3 protein 1, integrase n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HWF0_LYSSC Length = 390 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 122/348 (35%), Gaps = 46/348 (13%) Query: 39 TIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTG 98 T +EL + ++ E V +++ + +N ++ ++ + K+ ++ ++ Sbjct: 73 TYQELYDLWIPHYEKTVEESTFTKTVGIFRN--------HILPAMREYKIDKITVDVCQK 124 Query: 99 YQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPL----KE--- 151 + + + V F + GY+ NPF + K+ Sbjct: 125 HVDKWAEKLKK--------FRVVKAYAAKVLDFAIKRGYMQTNPFTHVDMPIAASKKVTI 176 Query: 152 --SRTIPDPLSREEFIRLIDACR---NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNG 206 + +RE+ I+ + N +A L+ + ++G+R GE AL W D++ Sbjct: 177 IEEEEAENFYTREQLIQFLACLEQENNYKAYALFRLLAFSGMRKGEALALTWNDLNFTTN 236 Query: 207 TMMIRRNLAKDR---FTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFRE 263 M I + L++ + V T+ G R I + + L + + Sbjct: 237 EMRINKALSRGKNNKLYVKSTKTGFARTIKMDDKTMAIL--------KEWKKKQKQEYLV 288 Query: 264 YGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYAC 323 G Q VF E + R+ K+ L ++ RHT+ Sbjct: 289 LGFNTMQPKQLVFSNERNEF-------LQPTKTRKWILHVQKKYKLGTITTHGLRHTHCS 341 Query: 324 WSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLS 371 AGA+ + +++GH+D Q +Y + + + L Sbjct: 342 LLFEAGASLKEVQDRLGHSDVQTTMNIYAHVTKKAKEEAIQKFASYLE 389 >UniRef50_C4RGE0 Integrase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RGE0_9ACTO Length = 481 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 67/363 (18%), Positives = 122/363 (33%), Gaps = 48/363 (13%) Query: 28 LEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEK 87 + T++ +L T + T+ Y ++ + L + + + Sbjct: 84 ATEAQRTASGWTVERWLRHWLDQH-TRIRPTTRLHYTRDVERV--------LIPHLGQYR 134 Query: 88 LLEVRKELLTGYQIPKSNYIVTQP-GRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGI 146 L ++ LL + T+ +SA + + T L A V G + NP + I Sbjct: 135 LADLDARLLRTVFDRIAQTTNTKGLPQSASAMQHLRTTLRAALNLAVRQGIIEGNPARHI 194 Query: 147 SPLKESRTIPDPLSR--------------------EEFIRLIDACRNQQAKNLWCVSVYT 186 + + + E+ +DA + W ++ Sbjct: 195 TVAGYRKPHAQVWTDDRINAWHASGEHPSVAVWTAEQLGTFLDAVADDPLFAFWWLTALR 254 Query: 187 GVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTV----PKTQAGTNRVIHLIKPAIDAL 242 G+R GE+C L W +IDL +G + + RN + V PKT AG R + L K + L Sbjct: 255 GLRRGEMCGLRWTEIDLNHGVLYVERNRTTAGYQVIEGDPKTPAG-RRPVALDKRTLHVL 313 Query: 243 RSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDA 302 R + + RE +VF V+ G + Sbjct: 314 REHRKRQQEQRTR------RETTGKTWIDSGYVF-------VRKDGSPLHPGYASGRFRL 360 Query: 303 AIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQ 362 IKR G+ + + RH A + AGA+ + + +GH+ + Y + + Sbjct: 361 LIKRTGVPPVRLHDLRHGAASLAHEAGADLKTLQDMLGHSSILVTADTYTSVLPLTHRRS 420 Query: 363 VAL 365 Sbjct: 421 ADA 423 >UniRef50_A5TWD8 Possible integrase n=3 Tax=Fusobacterium RepID=A5TWD8_FUSNP Length = 353 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 135/363 (37%), Gaps = 52/363 (14%) Query: 12 KTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNIL 71 K G + + + ++ K + L K+ + + + ++ +I Sbjct: 34 KRGFNSKKEALEYEKKVILDNSLGSNIPFKVAVNQHLEFKKLRIKELTYMNMSNILNSI- 92 Query: 72 SIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQF 131 + L S I ++ + +LL ++ + +F + Sbjct: 93 -TYFDNLLISDITPIQISNFQNDLLR--------------KYKGSSIRTINAYVKMLFTW 137 Query: 132 GVDNGYLADNPFKGISPLK-ESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRP 190 V L NPF + LK E++ D ++ +EF ++++ N K ++ + +TG+R Sbjct: 138 CVRYKNLTSNPFDMVDRLKLETKKRMDIITVDEFNQIVEQVNNPDMKLMFKLLFWTGLRI 197 Query: 191 GELCALGWEDIDLKNGTMMIRRNLA----KDRFTVPKTQAGTNRVIHLIKPAIDALRSQM 246 GE AL +DID N T+ + ++ K T PKT+ G+ RVI + + ++ + Sbjct: 198 GEARALKIDDIDFNNKTISVTKSYTNLSGKSIITTPKTK-GSIRVIKIDDVLLSEIKDYI 256 Query: 247 TLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKR 306 + F+F F S R + A + Sbjct: 257 DKAKYI-----------------LDDNFIF-------------RFNKASYRYNFKNATIK 286 Query: 307 AGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALL 366 R + + RH++A + + G + I+ ++GH++ M VY + N + L+ Sbjct: 287 VLGRDLRVHDLRHSHASFLINNGVDILLISKRLGHSNTAMTLNVYSHLYPDRENEAINLI 346 Query: 367 NTQ 369 N Sbjct: 347 NKL 349 >UniRef50_C5CAV2 Site-specific recombinase, integrase family n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5CAV2_MICLC Length = 396 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 75/358 (20%), Positives = 121/358 (33%), Gaps = 48/358 (13%) Query: 28 LEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYR-AVIKNILSIIGEKNLASSINKE 86 + A T+ E +++ + +L Y + L +GE + I++ Sbjct: 60 EAQVDSAPGMPTLAEFFPRYIEHRGLRCTPGTLAGYEAEAARTFLPRLGELPV-DMIDRR 118 Query: 87 KLLEVRKELLTGYQIPKSNYIVTQP------------GRSAVTVNNYMTNLNAVFQFGVD 134 + E + L S TV N L+AV V Sbjct: 119 TVAEWIRWQLQQPTARWRAAAARAAAATPPRPEPPLATVSPKTVRNAHALLSAVLGLAVQ 178 Query: 135 NGYLADNPFKGISPLKESRTIPD-PLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGEL 193 G L NP +G + SR E+ R A + L V + TG R GE Sbjct: 179 EGILPANPARGADLPDDDVEEERGIFSRAEWARFYAAISES-YQPLLIVLLVTGARWGEA 237 Query: 194 CALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHLIKPAIDALRSQMTLT 249 AL D+D+ + +RR K + VPKT G R I L A++ L Sbjct: 238 TALQVRDLDVAASVIHVRRAWKKGKEGAVLGVPKTARG-RRTIMLPDWAVETL------- 289 Query: 250 RLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGL 309 E + F+ G + + + W A+ AG+ Sbjct: 290 -------------EPLAAGRAADEFLLTAPGG------GVIHRTNFVERHWKPALAAAGI 330 Query: 310 -RHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALL 366 +H + RHT+A W+L G + +++GH Q +VY + + A V + Sbjct: 331 AKHLTPHSLRHTFASWALMDGVPAQVVQHRLGHESLQTTSRVYAHLLLDAQRAAVDAI 388 >UniRef50_B6FZV4 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZV4_9CLOT Length = 377 Score = 236 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 60/376 (15%), Positives = 130/376 (34%), Gaps = 42/376 (11%) Query: 9 YAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKE-TEVAKTSLNTYRAVI 67 K + K F + L+ + +T EL + +++ N Y Sbjct: 32 GKTKKEAQEKMKLFEAEV-LKNGYKKECKMTFDELYNIWFNEYVLNNCKESTTNNYARYY 90 Query: 68 KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNA 127 K K++ + K+ +++ +L+ + + + + + N +++ Sbjct: 91 K--------KHIKPILGNYKVSDIKARVLSDFFNK-----LKEEDKCHSSANIIRVVISS 137 Query: 128 VFQFGVD-NGYLADNPFKGISPLKESRTIPDPLSR--EEFIRLIDA-CRNQQAKNLWCVS 183 + + + +N K I K +T ++F ++D N+ + Sbjct: 138 CLDYAIFPLEIIENNSCKFIKFPKFKKTKDKKDIIDMKDFETILDIGSSKHNFNNMCLLL 197 Query: 184 VYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-----KDRFTVPKTQAGTNRVIHLIKPA 238 ++TG+R GE L WEDID N + +R L + + + PKT+ + R I+ Sbjct: 198 LHTGLRIGEALGLQWEDIDFDNKIIHVRHTLIAPNVRECKLSTPKTKT-SIRDIYFNDTV 256 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 ++ ++ K ++ G Sbjct: 257 EKVFKNIKKSQNENRL----------------KFGVLYNCNNMVFTHEDGSFLDHHHFTN 300 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 M ++ + + + RHT+A L AGAN + ++GHAD +Y + E+ Sbjct: 301 MVAKINRKTNI-NFSMHTFRHTHATMLLQAGANMKDVQARLGHADISTTMNIYVQDTEES 359 Query: 359 NNAQVALLNTQLSEFA 374 + N + + + Sbjct: 360 KKKALDKFNDYIEKTS 375 >UniRef50_C2F0I9 Transposon integrase n=3 Tax=Firmicutes RepID=C2F0I9_LACRE Length = 410 Score = 236 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 69/402 (17%), Positives = 134/402 (33%), Gaps = 72/402 (17%) Query: 16 FDYAKQFPSSRNLEKFGEARQ---------DLTIKELAEKFLALKETEVAKTSLNTYRAV 66 + YAK R EK E +T+ ++ + + + + + N Y+ + Sbjct: 38 YVYAKTLDQLRKREKQIEKDNVDGIRLVSMKMTLNDVYDIW-EGLKKGLKSNTFNNYKYM 96 Query: 67 IKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLN 126 + + + ++ + +L+ G +++ ++ Sbjct: 97 YNHFVRNDLGQYKIRTLKVTDIRRFYNKLVDV------------RGLKVSSLDTIQLIIH 144 Query: 127 AVFQFGVDNGYLADNPFKG----ISPLKESRTIPDP-LSREEFIRLIDACRNQ----QAK 177 V V + + N + ++ +IP L+ E+ ++ +N Sbjct: 145 QVLDLAVQDDLVRKNVSDNGLRELKRMRGIDSIPRKSLTIEQQNLFLNYLQNTDKYKHWY 204 Query: 178 NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----------FTVPKTQAG 227 + V + TG+R GEL L WEDID KN + + L PKT+AG Sbjct: 205 PTFAVMLGTGLRVGELTGLRWEDIDFKNNLIKVNHTLVFYERSKSSKTGFGINTPKTKAG 264 Query: 228 TNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNY 287 R I +IK +AL+ Q T + + + + + + Sbjct: 265 -FRTIPMIKTVREALQKQQTY---------------LQKEQIRSVDNIDGFRDFIFLNRF 308 Query: 288 GDHFTVDSIRQMWDAAIKRAG---------------LRHRKSYQSRHTYACWSLTAGANP 332 G + + I+ L + + RHT+ + +G N Sbjct: 309 GHVQNQGPLNKALKRIIRDCNFAELDKNPSINNDCLLPNFSCHVLRHTFTTRLVESGMNV 368 Query: 333 AFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFA 374 I N +GH+D Q +Y + N Q L +S+ A Sbjct: 369 KVIQNVLGHSDIQTTLNIYADVTRDMKNQQFNQLEDFISKDA 410 >UniRef50_Q636X3 Phage integrase n=18 Tax=Bacillales RepID=Q636X3_BACCZ Length = 381 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 66/347 (19%), Positives = 127/347 (36%), Gaps = 43/347 (12%) Query: 39 TIKELAEKFLAL-KETEVAKTSLNTYRAVI-KNILSIIGEKNLASSINKEKLLEVRKELL 96 ++K +L L K+ V K + + I K+I+ N+ + + L Sbjct: 62 SLKHYLRDWLKLFKQDNVRKNTFILHERNIEKHIIPYFQNMNI-KELKPMMYQKFINSL- 119 Query: 97 TGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIP 156 T G S TV +N + V + +NP + + ++ Sbjct: 120 ------------TDQGYSKRTVQIIHGTMNNAMKKAVSLKKIENNPCEEVVISNKNNKER 167 Query: 157 ---DPLSREEFIRLIDACR--NQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIR 211 + E+ + N + + TG+R GE AL W+DI+LK T+ I Sbjct: 168 EGLKYMRSEDIPLFLKTSYQYNYIYYIFFKALLNTGMRKGEAAALQWKDINLKEHTITIS 227 Query: 212 RNL------AKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYG 265 + L ++ F KT + R I + K +D L + +K + D + Sbjct: 228 KTLDFTAKTKEELFGDTKTFT-SKRTIMIPKSLVDELLAHKKWQNANKLVLQDAYE---- 282 Query: 266 RTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWS 325 + VF + G ++ + +K+A L + + RHT+A Sbjct: 283 ----HELDLVFS-------RVDGKFLPKSTLFNAFSRILKKANLPRLEIHSLRHTHAVLL 331 Query: 326 LTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSE 372 L +GA+ +I +++GH ++ VY + N ++ ++ Sbjct: 332 LESGASMKYIQDRLGHKSIEITSNVYSHISDKINKDSISGFEAYMNN 378 >UniRef50_C7N7P7 Site-specific recombinase XerD n=3 Tax=Bacteria RepID=C7N7P7_SLAHD Length = 356 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 57/372 (15%), Positives = 132/372 (35%), Gaps = 48/372 (12%) Query: 4 RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTY 63 R+ + IK G + + K + + + + +++ +T Sbjct: 21 RNRRRHTIKRGFKSEEEANEWEASFSKADSENMSMKFSQFMNLYTEDMRPRLRESTWHTK 80 Query: 64 RAVI-KNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYM 122 + +I K I+ GE ++ I ++ + E++ S G + + Sbjct: 81 QHMIDKKIMPFFGEMSM-DEITTIDVIRWQNEMM-------SEKGPKGTGYAETYLRAVN 132 Query: 123 TNLNAVFQFGVDNGYLADNPFKGI-SPLKESRTIPDPLSREEFIRLIDACRNQQA-KNLW 180 LNA+F V L +P + + ++EE+++ +A ++ + Sbjct: 133 NQLNAIFNHAVRYYGLPKSPCARVDKMGSKQGDEMKFWTKEEYLKFAEAIMDKPDSFTAF 192 Query: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDR----FTVPKTQAGTNRVIHLIK 236 + + G+R GE+ AL DI+L+ T+ + + + T PKT+ + R++ + K Sbjct: 193 EILYWCGLRVGEMLALTPSDINLERSTISVTKTFQRIHGRDTVTEPKTKK-SIRLVTMPK 251 Query: 237 PAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSI 296 + + + + +F FT + Sbjct: 252 FLSEEIAEYIA------------------SLDVGDHDRLF-------------PFTKTRM 280 Query: 297 RQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMS 356 D K +G++ + + RH++ + G + IA+++GH A + ++ Y Sbjct: 281 HHEMDRGCKESGVKRIRIHDLRHSHVSLLIDMGFSAVAIADRVGHESANITYR-YAHMFP 339 Query: 357 ENNNAQVALLNT 368 + L+ Sbjct: 340 NKQRDMASALDA 351 >UniRef50_D0DRR6 Site-specific recombinase n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DRR6_LACFE Length = 394 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 138/385 (35%), Gaps = 51/385 (13%) Query: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELA-EKFLALKETEVAKTS 59 G+ R C KT + + +T KE + F + V + + Sbjct: 51 GKRRQKRCSGFKTKTLAKEAY-RKMVAQVEDEQFNSPITFKEFCGKYFFPWYKFTVQEQT 109 Query: 60 LNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 + +++ + L S I + + + L + + T Sbjct: 110 YEHRKGMVERSFNQFDSMKL-SKITAFDVQKWQLGYLEDH--------------ANGTTR 154 Query: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQA--- 176 T L +F+ + + +NP K + +K S+ + ++++F ++ID Sbjct: 155 VAHTMLGKIFERAILMSLMRENPAKIVGNVKRSQDEVEFWTKDQFQKVIDQTSKDTYTHR 214 Query: 177 --KNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK---DRFTVPKTQAG-TNR 230 + TG+R GE AL W+D+DLK GT+ I ++L + + + KT+ + R Sbjct: 215 FDFIILWFLFMTGMRSGEAKALTWKDVDLKAGTIDINKSLLYKSVNNYKLGKTKNRQSMR 274 Query: 231 VIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDH 290 VI + ID L RL + FV + G Sbjct: 275 VISIDPQTIDYLEEWYEDQRLM-----------------TRSEFV--------LSQDGAP 309 Query: 291 FTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQV 350 I + A + ++ RH++A ++ G NP I +++GH D + ++ Sbjct: 310 LNSTYINDIVHDYGDLAKVPTVTAHALRHSHASLLISLGENPLVIRDRLGHKDVRTTLEI 369 Query: 351 YGKWMSENNNAQVALLNTQLSEFAP 375 YG +++ L ++ + Sbjct: 370 YGHLYPKSDIEASKRLEGLVTVPSK 394 >UniRef50_A4G7G1 Putative integrase n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G7G1_HERAR Length = 387 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 91/378 (24%), Positives = 169/378 (44%), Gaps = 50/378 (13%) Query: 2 ELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLN 61 + + V ++TG+F YA FP SR+ + T+ E +K+ A + E+ ++L+ Sbjct: 49 RIAAEVRDKVRTGLFAYADYFPQSRHAK----PDHVGTVGEFMDKWYA--QLELKPSTLS 102 Query: 62 TYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNY 121 Y+ + +N ++ ++++ ++ +T + + S T NN Sbjct: 103 EYKRMKENFWK--------PALGRKRVDKITHSDITT-------ALKSGTWSSNRTRNNM 147 Query: 122 MTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAK---N 178 + L AVF V +G + NP I + R PDP S E R+I + +Q + N Sbjct: 148 LYMLRAVFNLAVADGVIHKNPCATIENAQWQRKKPDPFSIVEANRIIASLHEKQHQQVAN 207 Query: 179 LWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPA 238 + ++G+R GE L W ++DL ++IR++ + KT + R + L A Sbjct: 208 FYEFMFFSGLRTGEGLGLDWANVDLHKRIVVIRQSFVRGEMQETKT--SSERTVKLTNRA 265 Query: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 +DAL+ Q T L K VF + R + + Sbjct: 266 LDALKRQKAWTLL------------------DKSGRVFHNPSTNRPWAKEQNISEPY--- 304 Query: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWM-SE 357 W A+K G+R+R+ Y +R TYA L +GA PA++A Q+GH+ ++ ++ Y W+ + Sbjct: 305 -WKPALKLLGIRYRRPYNTRATYATIGLMSGARPAYMAAQLGHS-LEVFYRDYADWIADQ 362 Query: 358 NNNAQVALLNTQLSEFAP 375 +++ ++ + Q+ P Sbjct: 363 DDDREMGKIEAQIGASIP 380 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.165 0.501 Lambda K H 0.267 0.0506 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,298,631,975 Number of Sequences: 3077464 Number of extensions: 105871269 Number of successful extensions: 377393 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 7007 Number of HSP's successfully gapped in prelim test: 5112 Number of HSP's that attempted gapping in prelim test: 341795 Number of HSP's gapped (non-prelim): 15372 length of query: 385 length of database: 1,040,396,356 effective HSP length: 130 effective length of query: 255 effective length of database: 640,326,036 effective search space: 163283139180 effective search space used: 163283139180 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 95 (40.9 bits)