Phyre 2 alignment of P0AAL6 with c3lw5H_

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Job Description | P0AAL6
Confidence | 6.81% | Date | Thu Jan 5 11:13:14 GMT 2012
Rank | 88 | Aligned Residues | 39
% Identity | 23% | Template | c3lw5H_
PDB info | PDB header:photosynthesis | Chain: H: PDB Molecule:putative uncharacterized protein; | PDBTitle: improved model of plant photosystem i
Resolution | 3.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | N | P | V | D | R | P | L | L | D | I | G | . | . | . | L | T | R | L | E | F | L | R | I | S | G | K | G | L | A | G | L | T | I | A | P | A | L | L | S | L | L | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | N | P | L | Q | S | K | L | F | E | T | F | A | A | P | F | T | K | R | G | L | L | L | K | F | L | I | L | G | G | G | S | T | L | A | Y | L | S | A | T | A | S | G
Template Known Secondary structure |  |  |  | S |  |  | S | S | S | S | S | S | S |  | T | T | T | S |  | S | S |  | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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