Phyre 2 alignment of P0AAL6 with c2oo4B_

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Job Description | P0AAL6
Confidence | 14.38% | Date | Thu Jan 5 11:13:14 GMT 2012
Rank | 80 | Aligned Residues | 58
% Identity | 22% | Template | c2oo4B_
PDB info | PDB header:cell cycle,signaling protein | Chain: B: PDB Molecule:neurogenic locus notch homolog protein 2; | PDBTitle: structure of lnr-hd (negative regulatory region) from human notch 2
Resolution | 2.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | L | L | D | I | G | L | T | R | L | E | F | L | R | I | S | G | K | G | L | A | G | L | T | I | A | P | A | L | L | S | L | L | G | C | K | Q | E | D | I | D | S | G | T | V | G | L | I | N | T | P | K | G | V | L | V | T | Q | R | A | R | C | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | P | E | Q | L | L | Q | D | A | R | S | F | L | R | A | L | G | T | L | . | . | . | . | . | L | H | T | N | L | R | I | K | R | D | S | Q | G | E | L | M | V | Y | P | Y | Y | G | E | V | A | G | S | K | V | F | L | E | I | D | N | R | Q | C | V
Template Known Secondary structure |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | T | T | S |  |  |  |  |  | B |  | T | T | S |  | B |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1554 | . | . | . | . | . | 1560 | . | . | . | . | . | . | . | . | . | 1570 | . | . |  |  |  |  |  | . | . | . | . | . | . | . | 1580 | . | . | . | . | . | . | . | . | . | 1590 | . | . | . | . | . | . | . | . | . | 1600 | . | . | . | . | . | . | . | . | . | 1610 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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