14/01/2012 18:50:31 : INFO  : Run start: Sat Jan 14 18:50:30 GMT 2012
14/01/2012 18:50:36 : INFO  : Initialised job
14/01/2012 18:50:38 : INFO  : Renaming log file 'phyre2_20120114_185030.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/e1b32e76e98e7598/phyre_20120114_185030.log'
14/01/2012 18:50:39 : INFO  : Initialised job:
Sequence
>batch____
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGV
LVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTA
DTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKS
SKCVLCGECANACPTGALKIIEWKDITV

14/01/2012 18:50:40 : INFO  : Checked sequence
14/01/2012 18:50:44 : INFO  : Finding homologues with PSI-BLAST
14/01/2012 18:50:45 : INFO  : PSI-BLAST 3 iterations
14/01/2012 18:52:04 : INFO  : PSI-BLAST 5 iterations
14/01/2012 18:53:58 : INFO  : Finished PSI-BLAST
14/01/2012 18:54:00 : INFO  : Running Buildali to generate a3m file
14/01/2012 19:12:19 : INFO  : Converting to HMM
14/01/2012 19:12:23 : INFO  : Calibrating HMM
14/01/2012 19:12:38 : INFO  : Searching HMM database
14/01/2012 19:16:37 : INFO  : Finished buildali
14/01/2012 19:16:39 : INFO  : Predicting secondary structure
14/01/2012 19:16:52 : INFO  : Predicted secondary structure (PSI-Pred)
14/01/2012 19:16:55 : INFO  : Predicting Disordered regions
14/01/2012 19:17:02 : INFO  : Predicted Disorder (Disopred)
14/01/2012 19:17:05 : INFO  : Running memsat_svm check
14/01/2012 19:21:13 : INFO  : Running memsat_svm full
14/01/2012 19:27:44 : INFO  : Predicted Transmembrane (memsat_svm) ID 'e1b32e76e98e7598'
14/01/2012 19:27:47 : INFO  : Initialising fold library search
14/01/2012 19:27:52 : INFO  : Initialised search input
14/01/2012 19:27:55 : INFO  : Building Ensemble models
14/01/2012 19:27:59 : INFO  : Building hh.c2ivfB_.model.1.pdb
14/01/2012 19:28:18 : INFO  : Building hh.c2vpyB_.model.2.pdb
14/01/2012 19:28:34 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/e1b32e76e98e7598/hh.c2vpyB_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/e1b32e76e98e7598/c2vpyB_.6.pdb
14/01/2012 19:28:39 : INFO  : Building hh.d1y5ib1.model.3.pdb
14/01/2012 19:28:55 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/e1b32e76e98e7598/hh.d1y5ib1.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/e1b32e76e98e7598/d1y5ib1.8.pdb
14/01/2012 19:29:01 : INFO  : Building hh.c2e76D_.model.4.pdb
14/01/2012 19:29:16 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/e1b32e76e98e7598/hh.c2e76D_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/e1b32e76e98e7598/c2e76D_.60.pdb
14/01/2012 19:29:22 : INFO  : Building hh.c1p84E_.model.5.pdb
14/01/2012 19:29:39 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/e1b32e76e98e7598/hh.c1p84E_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/e1b32e76e98e7598/c1p84E_.63.pdb
14/01/2012 19:29:44 : INFO  : Building hh.c2fynO_.model.6.pdb
14/01/2012 19:30:02 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/e1b32e76e98e7598/hh.c2fynO_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/e1b32e76e98e7598/c2fynO_.64.pdb
14/01/2012 19:30:07 : INFO  : Building c2ivfB_.1.pdb
14/01/2012 19:30:26 : INFO  : Building c1ti2F_.2.pdb
14/01/2012 19:30:43 : INFO  : Building c1kqfB_.3.pdb
14/01/2012 19:31:02 : INFO  : Building d1kqfb1.4.pdb
14/01/2012 19:31:21 : INFO  : Building d1h0hb_.5.pdb
14/01/2012 19:31:40 : INFO  : Building c2vpyB_.6.pdb
14/01/2012 19:32:00 : INFO  : Building d1vlfn2.7.pdb
14/01/2012 19:32:22 : INFO  : Building d1y5ib1.8.pdb
14/01/2012 19:32:42 : INFO  : Building c1gthD_.9.pdb
14/01/2012 19:33:05 : INFO  : Building d2fug91.10.pdb
14/01/2012 19:33:28 : INFO  : Building c2fugG_.11.pdb
14/01/2012 19:33:48 : INFO  : Building d1xera_.12.pdb
14/01/2012 19:34:09 : INFO  : Building c3gyxJ_.13.pdb
14/01/2012 19:34:29 : INFO  : Building d1jnrb_.14.pdb
14/01/2012 19:34:49 : INFO  : Building d1hfel2.15.pdb
14/01/2012 19:35:10 : INFO  : Building c2c3yA_.16.pdb
14/01/2012 19:35:34 : INFO  : Building d1gtea5.17.pdb
14/01/2012 19:35:54 : INFO  : Building c2zvsB_.18.pdb
14/01/2012 19:36:15 : INFO  : Building d1jb0c_.19.pdb
14/01/2012 19:36:36 : INFO  : Building c2gmhA_.20.pdb
14/01/2012 19:38:59 : INFO  : Finished HH model building
14/01/2012 19:39:01 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
14/01/2012 19:40:11 : INFO  : html domain output complete ID 'e1b32e76e98e7598'
14/01/2012 19:55:58 : INFO  : Run end  : Sat Jan 14 19:55:57 GMT 2012
