Phyre 2 alignment of P0AAL6 with c2v2kB_

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Job Description | P0AAL6
Confidence | 98.96% | Date | Thu Jan 5 11:13:14 GMT 2012
Rank | 38 | Aligned Residues | 53
% Identity | 25% | Template | c2v2kB_
PDB info | PDB header:electron transport | Chain: B: PDB Molecule:ferredoxin; | PDBTitle: the crystal structure of fdxa, a 7fe ferredoxin from2 mycobacterium smegmatis
Resolution | 1.6 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 150 | . | . | . | . | . | . | . | . | . |  |  | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . |  |  | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | V | D | H | K | R | C | I | G | C | . | . | S | A | C | T | T | A | C | P | W | M | M | A | T | V | N | T | E | S | K | K | S | S | . | . | K | C | V | L | C | G | E | C | A | N | A | C | P | T | G | A | L | K | I | I | E | W
Query Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | V | I | A | E | P | C | V | D | V | K | D | K | A | C | I | E | E | C | P | V | D | C | I | Y | E | G | A | R | M | L | Y | I | H | P | D | E | C | V | D | G | . | A | C | E | P | V | C | P | V | E | A | I | Y | Y | E | D | D
Template Known Secondary structure |  |  |  |  |  | G | G | G | T | T | T |  |  |  | T | G | G | G | T |  | T | T |  |  |  |  |  |  | S | S |  |  |  |  |  | T | T | T |  |  |  |  | . |  | S | G | G | G |  | T | T |  |  |  |  |  | G | G | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . |  | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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