53 c2ch4A_ Probab=98.25   E-value=2.3e-05  Score=53.13  Aligned_columns=120  Identities=21%

Q ss_pred             CCCCHHHHHHHHHHHHHHCC--------------CCEEEEEEE-CCCEEEEEEEECCCCCC-------------------
Q ss_conf             12388899999997677279--------------957999997-39864999998889988-------------------
Q batch____        19 VVERPASVVKELVENSLDAG--------------ATRIDIDIE-RGGAKLIRIRDNGCGIK-------------------   64 (615)
Q Consensus        19 VI~~pasvvkELieNsiDAg--------------At~I~V~i~-~~g~~~I~V~DnG~Gi~-------------------   64 (615)
                      ++++...++..||.||+|.|              +.+|.|.+. .++.-.|.|.|||.||+                   
T Consensus        44 ~~~~l~~~l~~li~NAi~~~~e~~~~r~~~gk~~~g~i~i~~~~~~~~~~i~v~D~G~Gi~~~~i~~~a~~~~~~~~~~~  123 (320)
T c2ch4A_          44 FVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKA  123 (320)
T ss_dssp             HHHHTHHHHHHHHHHHHHTTSCCHHHHHHTTCCSSEEEEEEEEECSSEEEEEEEECSSCCCHHHHHHHHHHTTCSCTTGG
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHH
T ss_conf             89999999999999999701215300011368998589999996789899999638889870134777876358897882


Q ss_pred             -----HHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHEE-----EEEEEECCCCCCEEEEEEECCCEEEEE
Q ss_conf             -----8889873113346678886775203247741489998884104-----899994189983279999688101122
Q batch____        65 -----KDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSR-----LTLTSRTAEQQEAWQAYAEGRDMNVTV  134 (615)
Q Consensus        65 -----~~dl~~~~~rh~TSKi~~~~dl~~i~t~GFRGEAL~si~~vs~-----l~i~Sk~~~~~~~~~~~~~~~~~~~~~  134 (615)
                           .+.+++++.+..+.+       .....++-||=.|+-...+.+     ++|.| ..+....+.+.+.-.......
T Consensus       124 ~~~~~~e~~~~if~~~~s~~-------~~~~~~~g~glGl~~v~~~~~~~~g~i~~~s-~~~~gt~~~~~~p~~~~~~~~  195 (320)
T c2ch4A_         124 ATLSDQEILNFLFVPGFSTK-------EKVSEVSGRGVGMDVVKNVVESLNGSISIES-EKDKGTKVTIRLPLTLAIIQA  195 (320)
T ss_dssp             GSCCHHHHHHTTTSTTTTCC-------CSHHHHTSSCCCHHHHHHHHHHTTCEEEEEE-CTTSCEEEEEEEESSCCEEEE
T ss_pred             CCCCHHHHHHHHCCCCEEEC-------CCCCCCCCCCCHHHHHHHHHHHCCCEEEEEE-ECCCCEEEEEEECCCCCCCCC
T ss_conf             56897898885237750313-------6788776454028999989986098799997-889955999995266553322


Q ss_pred             EECCCCCCCEEE
Q ss_conf             312589972899
Q batch____       135 KPAAHPVGTTLE  146 (615)
Q Consensus       135 ~~~~~~~GT~V~  146 (615)
                      ............
T Consensus       196 ~~~~~~~~~~ai  207 (320)
T c2ch4A_         196 LLVKVNNLVYAI  207 (320)
T ss_dssp             EEEESSSCEEEE
T ss_pred             CCCCCCCCCCEE
T ss_conf             110123564023