BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (178 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P76208 Uncharacterized protein yniB n=122 Tax=Enterobac... 363 1e-99 UniRef50_C9Y2N2 Uncharacterized protein yniB n=36 Tax=Enterobact... 275 4e-73 UniRef50_Q2NT33 Putative uncharacterized protein n=9 Tax=Enterob... 221 8e-57 UniRef50_B4ETJ4 Putative membrane protein n=3 Tax=Proteus RepID=... 178 7e-44 UniRef50_Q12J19 Putative yfeABCD locus regulator n=1 Tax=Shewane... 104 2e-21 UniRef50_D0KWF6 Putative yfeABCD locus regulator n=1 Tax=Halothi... 82 7e-15 UniRef50_Q4KEJ9 Putative uncharacterized protein n=1 Tax=Pseudom... 69 5e-11 >UniRef50_P76208 Uncharacterized protein yniB n=122 Tax=Enterobacteriaceae RepID=YNIB_ECOLI Length = 178 Score = 363 bits (932), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 178/178 (100%), Positives = 178/178 (100%) Query: 1 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDM 60 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDM Sbjct: 1 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDM 60 Query: 61 MQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQDSGARMSRQARFLREGVE 120 MQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQDSGARMSRQARFLREGVE Sbjct: 61 MQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQDSGARMSRQARFLREGVE 120 Query: 121 DQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLLGFI 178 DQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLLGFI Sbjct: 121 DQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLLGFI 178 >UniRef50_C9Y2N2 Uncharacterized protein yniB n=36 Tax=Enterobacteriaceae RepID=C9Y2N2_CROTZ Length = 178 Score = 275 bits (704), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 131/178 (73%), Positives = 150/178 (84%) Query: 1 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDM 60 MTYQQAGRI VLKRI GWVIFIPA +ST+IS+LKFM E + GINAVM+DF HVMI+M Sbjct: 1 MTYQQAGRIGVLKRIAGWVIFIPATLSTIISVLKFMYQHSEKQPGINAVMMDFAHVMIEM 60 Query: 61 MQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQDSGARMSRQARFLREGVE 120 ++ NTPFLNLFWYNSP P+F N+ FW+I+ILIFVGLALQ SGARM RQARFLRE VE Sbjct: 61 VRFNTPFLNLFWYNSPQPDFTRNANISFWIIYILIFVGLALQASGARMCRQARFLREHVE 120 Query: 121 DQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLLGFI 178 D LILE+AKGE+GLTR+ +ESRIVVP HTIFLQ F LY+LPVI + GYVFFSLLGF+ Sbjct: 121 DSLILERAKGEDGLTRDALESRIVVPRHTIFLQIFPLYVLPVIVLVLGYVFFSLLGFL 178 >UniRef50_Q2NT33 Putative uncharacterized protein n=9 Tax=Enterobacteriaceae RepID=Q2NT33_SODGM Length = 182 Score = 221 bits (563), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 108/182 (59%), Positives = 138/182 (75%), Gaps = 4/182 (2%) Query: 1 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDM 60 M YQQAGR+AV+KRI GWVIFI A+IST IS+LKF+ + INA + DF HV+IDM Sbjct: 1 MKYQQAGRLAVIKRIAGWVIFISAVISTFISVLKFIEQNSGPNQVINAFVSDFFHVIIDM 60 Query: 61 MQANTPFLNLFWYNSPTPNFNGGV----NVMFWVIFILIFVGLALQDSGARMSRQARFLR 116 M+ NTPFLN FW+NS +F+ G+ N++FW I+IL+F+GLALQ SGARMSRQ + +R Sbjct: 61 MRFNTPFLNAFWHNSLQSDFSHGLFASPNLVFWGIYILVFIGLALQASGARMSRQVKHIR 120 Query: 117 EGVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLLG 176 EGVEDQ++LE+A+G+ G++R Q+E RIV+P HTI LQ F LYILPVI GY F LLG Sbjct: 121 EGVEDQMVLEQARGDSGISRAQLEQRIVMPQHTILLQIFPLYILPVIIAIVGYFAFKLLG 180 Query: 177 FI 178 + Sbjct: 181 ML 182 >UniRef50_B4ETJ4 Putative membrane protein n=3 Tax=Proteus RepID=B4ETJ4_PROMH Length = 184 Score = 178 bits (452), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 87/180 (48%), Positives = 126/180 (70%), Gaps = 4/180 (2%) Query: 1 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDM 60 M+YQ AG A++KR++GW+IFIPA IST +SL++ + N EG+NAV+ DF V+ +M Sbjct: 6 MSYQHAGIYAIVKRVIGWLIFIPAFISTTVSLIELAAMPRANGEGVNAVINDFFRVLAEM 65 Query: 61 MQANTPFLNLFWYNSPTPNFNGGV---NVMFWVIFILIFVGLALQDSGARMSRQARFLRE 117 +Q NTP+L+ FW +SP PN G N++F+VIF L+F+GLAL SG RM RQ ++L+E Sbjct: 66 VQFNTPWLDFFWRHSPVPNTQIGFSQQNIIFFVIFFLMFIGLALSASGLRMYRQVKYLKE 125 Query: 118 GVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLLGF 177 ++DQLI+E+A + G+T +++E I +P HT+F Q LYI P+I IA GY LG+ Sbjct: 126 NIQDQLIIERAL-KSGITAQELEQNIKLPRHTLFTQVMVLYISPIIVIAIGYFLLKFLGW 184 >UniRef50_Q12J19 Putative yfeABCD locus regulator n=1 Tax=Shewanella denitrificans OS217 RepID=Q12J19_SHEDO Length = 180 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 101/178 (56%), Gaps = 3/178 (1%) Query: 1 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDM 60 M +Q+A + +++ R++G +I IP++IST+IS LK + R ++ +++ M+++ Sbjct: 1 MNFQEARKKSLIYRLVGALIVIPSVISTIISFLKMIYFRLDDGTEFGSILTQPFKKMVEI 60 Query: 61 MQANTPFLNLFWYNSPTPN---FNGGVNVMFWVIFILIFVGLALQDSGARMSRQARFLRE 117 + +T FL +FW SP PN + N+ F +I++ IF G+ +G+ +S + R +R+ Sbjct: 61 IHQHTDFLIIFWNKSPVPNHMNISEPQNIPFILIYLTIFFGITFWGAGSSLSLRLRKIRK 120 Query: 118 GVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLL 175 +EDQ+I E KG T +I IV+P + +F + LY+ P++ G V L Sbjct: 121 KIEDQVIEESIKGVAARTHAEIRKSIVIPSNGMFSEAHKLYLAPIVVTVIGAVLVKFL 178 >UniRef50_D0KWF6 Putative yfeABCD locus regulator n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWF6_HALNC Length = 181 Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 90/167 (53%), Gaps = 3/167 (1%) Query: 1 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDM 60 MTY +A + ++K ++G + + +S+ +S LK ++ + +++ + ++ + Sbjct: 1 MTYDEAKKKILIKWLVGAPVVVATSLSSAVSALKMFYFGLDSGDQLSSAIALPIKRLVYL 60 Query: 61 MQANTPFLNLFWYNSPTPNFN---GGVNVMFWVIFILIFVGLALQDSGARMSRQARFLRE 117 + NT FL FW +SPTP N+ F+VI++ IF G+AL S +S + + + Sbjct: 61 IYENTFFLGFFWKHSPTPTPKELFATSNIAFFVIYLCIFFGMALVGSARSLSARLAEIDK 120 Query: 118 GVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVIC 164 +E++LI E KG R++I+ ++ VP QF +LY+ P++ Sbjct: 121 EIENELIRESVKGNVPRRRQEIQEQVSVPKPGRLSQFHTLYLAPIVA 167 >UniRef50_Q4KEJ9 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KEJ9_PSEF5 Length = 220 Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 84/170 (49%), Gaps = 4/170 (2%) Query: 1 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDM 60 MTY +A L G ++F ALIST S LK + R ++ + + + + Sbjct: 39 MTYTRAQLQYRLYIAAGALLFTGALISTFFSTLKMLYWRLDSYTTMASTINRPIKYFVYQ 98 Query: 61 MQANTPFLNLFWYNSPTPNF---NGGVNVMFWVIFILIFVGLALQDSGARMSRQARFLRE 117 + ANT LN FW NSPTP+F + + F VI++LIFVG AL +G M R+ + Sbjct: 99 VNANTQPLNWFWDNSPTPSFLDLSYSSHWKFLVIYLLIFVGAALFATGRGMIRKVEEVEP 158 Query: 118 GVEDQLILEKAKGEEGLTREQIE-SRIVVPHHTIFLQFFSLYILPVICIA 166 +E QL +G T +Q+E S +V + F Q L + P+ C A Sbjct: 159 LIEAQLQAPVEEGVPAKTLQQLEDSTLVGKAPSFFSQTRLLVVWPLGCAA 208 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76208 Uncharacterized protein yniB n=122 Tax=Enterobac... 233 2e-60 UniRef50_C9Y2N2 Uncharacterized protein yniB n=36 Tax=Enterobact... 232 4e-60 UniRef50_Q2NT33 Putative uncharacterized protein n=9 Tax=Enterob... 213 3e-54 UniRef50_B4ETJ4 Putative membrane protein n=3 Tax=Proteus RepID=... 204 2e-51 UniRef50_Q12J19 Putative yfeABCD locus regulator n=1 Tax=Shewane... 201 7e-51 UniRef50_D0KWF6 Putative yfeABCD locus regulator n=1 Tax=Halothi... 194 1e-48 UniRef50_Q4KEJ9 Putative uncharacterized protein n=1 Tax=Pseudom... 190 1e-47 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef50_P76208 Uncharacterized protein yniB n=122 Tax=Enterobacteriaceae RepID=YNIB_ECOLI Length = 178 Score = 233 bits (594), Expect = 2e-60, Method: Composition-based stats. Identities = 178/178 (100%), Positives = 178/178 (100%) Query: 1 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDM 60 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDM Sbjct: 1 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDM 60 Query: 61 MQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQDSGARMSRQARFLREGVE 120 MQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQDSGARMSRQARFLREGVE Sbjct: 61 MQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQDSGARMSRQARFLREGVE 120 Query: 121 DQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLLGFI 178 DQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLLGFI Sbjct: 121 DQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLLGFI 178 >UniRef50_C9Y2N2 Uncharacterized protein yniB n=36 Tax=Enterobacteriaceae RepID=C9Y2N2_CROTZ Length = 178 Score = 232 bits (592), Expect = 4e-60, Method: Composition-based stats. Identities = 131/178 (73%), Positives = 150/178 (84%) Query: 1 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDM 60 MTYQQAGRI VLKRI GWVIFIPA +ST+IS+LKFM E + GINAVM+DF HVMI+M Sbjct: 1 MTYQQAGRIGVLKRIAGWVIFIPATLSTIISVLKFMYQHSEKQPGINAVMMDFAHVMIEM 60 Query: 61 MQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQDSGARMSRQARFLREGVE 120 ++ NTPFLNLFWYNSP P+F N+ FW+I+ILIFVGLALQ SGARM RQARFLRE VE Sbjct: 61 VRFNTPFLNLFWYNSPQPDFTRNANISFWIIYILIFVGLALQASGARMCRQARFLREHVE 120 Query: 121 DQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLLGFI 178 D LILE+AKGE+GLTR+ +ESRIVVP HTIFLQ F LY+LPVI + GYVFFSLLGF+ Sbjct: 121 DSLILERAKGEDGLTRDALESRIVVPRHTIFLQIFPLYVLPVIVLVLGYVFFSLLGFL 178 >UniRef50_Q2NT33 Putative uncharacterized protein n=9 Tax=Enterobacteriaceae RepID=Q2NT33_SODGM Length = 182 Score = 213 bits (542), Expect = 3e-54, Method: Composition-based stats. Identities = 108/182 (59%), Positives = 138/182 (75%), Gaps = 4/182 (2%) Query: 1 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDM 60 M YQQAGR+AV+KRI GWVIFI A+IST IS+LKF+ + INA + DF HV+IDM Sbjct: 1 MKYQQAGRLAVIKRIAGWVIFISAVISTFISVLKFIEQNSGPNQVINAFVSDFFHVIIDM 60 Query: 61 MQANTPFLNLFWYNSPTPNFNGGV----NVMFWVIFILIFVGLALQDSGARMSRQARFLR 116 M+ NTPFLN FW+NS +F+ G+ N++FW I+IL+F+GLALQ SGARMSRQ + +R Sbjct: 61 MRFNTPFLNAFWHNSLQSDFSHGLFASPNLVFWGIYILVFIGLALQASGARMSRQVKHIR 120 Query: 117 EGVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLLG 176 EGVEDQ++LE+A+G+ G++R Q+E RIV+P HTI LQ F LYILPVI GY F LLG Sbjct: 121 EGVEDQMVLEQARGDSGISRAQLEQRIVMPQHTILLQIFPLYILPVIIAIVGYFAFKLLG 180 Query: 177 FI 178 + Sbjct: 181 ML 182 >UniRef50_B4ETJ4 Putative membrane protein n=3 Tax=Proteus RepID=B4ETJ4_PROMH Length = 184 Score = 204 bits (518), Expect = 2e-51, Method: Composition-based stats. Identities = 87/180 (48%), Positives = 126/180 (70%), Gaps = 4/180 (2%) Query: 1 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDM 60 M+YQ AG A++KR++GW+IFIPA IST +SL++ + N EG+NAV+ DF V+ +M Sbjct: 6 MSYQHAGIYAIVKRVIGWLIFIPAFISTTVSLIELAAMPRANGEGVNAVINDFFRVLAEM 65 Query: 61 MQANTPFLNLFWYNSPTPNFNGGV---NVMFWVIFILIFVGLALQDSGARMSRQARFLRE 117 +Q NTP+L+ FW +SP PN G N++F+VIF L+F+GLAL SG RM RQ ++L+E Sbjct: 66 VQFNTPWLDFFWRHSPVPNTQIGFSQQNIIFFVIFFLMFIGLALSASGLRMYRQVKYLKE 125 Query: 118 GVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLLGF 177 ++DQLI+E+A + G+T +++E I +P HT+F Q LYI P+I IA GY LG+ Sbjct: 126 NIQDQLIIERAL-KSGITAQELEQNIKLPRHTLFTQVMVLYISPIIVIAIGYFLLKFLGW 184 >UniRef50_Q12J19 Putative yfeABCD locus regulator n=1 Tax=Shewanella denitrificans OS217 RepID=Q12J19_SHEDO Length = 180 Score = 201 bits (512), Expect = 7e-51, Method: Composition-based stats. Identities = 55/178 (30%), Positives = 101/178 (56%), Gaps = 3/178 (1%) Query: 1 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDM 60 M +Q+A + +++ R++G +I IP++IST+IS LK + R ++ +++ M+++ Sbjct: 1 MNFQEARKKSLIYRLVGALIVIPSVISTIISFLKMIYFRLDDGTEFGSILTQPFKKMVEI 60 Query: 61 MQANTPFLNLFWYNSPTPN---FNGGVNVMFWVIFILIFVGLALQDSGARMSRQARFLRE 117 + +T FL +FW SP PN + N+ F +I++ IF G+ +G+ +S + R +R+ Sbjct: 61 IHQHTDFLIIFWNKSPVPNHMNISEPQNIPFILIYLTIFFGITFWGAGSSLSLRLRKIRK 120 Query: 118 GVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLL 175 +EDQ+I E KG T +I IV+P + +F + LY+ P++ G V L Sbjct: 121 KIEDQVIEESIKGVAARTHAEIRKSIVIPSNGMFSEAHKLYLAPIVVTVIGAVLVKFL 178 >UniRef50_D0KWF6 Putative yfeABCD locus regulator n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWF6_HALNC Length = 181 Score = 194 bits (493), Expect = 1e-48, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 93/180 (51%), Gaps = 3/180 (1%) Query: 1 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDM 60 MTY +A + ++K ++G + + +S+ +S LK ++ + +++ + ++ + Sbjct: 1 MTYDEAKKKILIKWLVGAPVVVATSLSSAVSALKMFYFGLDSGDQLSSAIALPIKRLVYL 60 Query: 61 MQANTPFLNLFWYNSPTPNFNG---GVNVMFWVIFILIFVGLALQDSGARMSRQARFLRE 117 + NT FL FW +SPTP N+ F+VI++ IF G+AL S +S + + + Sbjct: 61 IYENTFFLGFFWKHSPTPTPKELFATSNIAFFVIYLCIFFGMALVGSARSLSARLAEIDK 120 Query: 118 GVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLLGF 177 +E++LI E KG R++I+ ++ VP QF +LY+ P++ V + G Sbjct: 121 EIENELIRESVKGNVPRRRQEIQEQVSVPKPGRLSQFHTLYLAPIVAGVVVLVIAKISGL 180 >UniRef50_Q4KEJ9 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KEJ9_PSEF5 Length = 220 Score = 190 bits (484), Expect = 1e-47, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 84/171 (49%), Gaps = 4/171 (2%) Query: 1 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDM 60 MTY +A L G ++F ALIST S LK + R ++ + + + + Sbjct: 39 MTYTRAQLQYRLYIAAGALLFTGALISTFFSTLKMLYWRLDSYTTMASTINRPIKYFVYQ 98 Query: 61 MQANTPFLNLFWYNSPTPNF---NGGVNVMFWVIFILIFVGLALQDSGARMSRQARFLRE 117 + ANT LN FW NSPTP+F + + F VI++LIFVG AL +G M R+ + Sbjct: 99 VNANTQPLNWFWDNSPTPSFLDLSYSSHWKFLVIYLLIFVGAALFATGRGMIRKVEEVEP 158 Query: 118 GVEDQLILEKAKGEEGLTREQIE-SRIVVPHHTIFLQFFSLYILPVICIAA 167 +E QL +G T +Q+E S +V + F Q L + P+ C A Sbjct: 159 LIEAQLQAPVEEGVPAKTLQQLEDSTLVGKAPSFFSQTRLLVVWPLGCAAV 209 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.322 0.142 0.377 Lambda K H 0.267 0.0436 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 651,206,857 Number of Sequences: 3077464 Number of extensions: 23817683 Number of successful extensions: 109587 Number of sequences better than 1.0e-01: 8 Number of HSP's better than 0.1 without gapping: 13 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 109558 Number of HSP's gapped (non-prelim): 16 length of query: 178 length of database: 1,040,396,356 effective HSP length: 120 effective length of query: 58 effective length of database: 671,100,676 effective search space: 38923839208 effective search space used: 38923839208 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.4 bits) S2: 89 (38.8 bits)