 |
| Job Description | P76208 | | Confidence | 3.50% | Date | Thu Jan 5 12:20:33 GMT 2012 |
| Rank | 65 | Aligned Residues | 36 |
| % Identity | 25% | Template | c2q2fA_ |
| PDB info |
PDB header:membrane protein | Chain: A: PDB Molecule:selenoprotein s; |
PDBTitle: structure of the human selenoprotein s (vcp-interacting membrane2 protein)
|
| Resolution | 1.50 Å |
|
|   |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
. | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | L | Q | D | S | G | A | R | M | S | R | Q | A | . |
R | F | L | R | E | G | V | E | D | Q | L | I | L | E | K | A | K | G | E | E | G | L | T | R | E | Q | I | E |
| Query Conservation |   |
|
|   |
|
|
|   |   |
|
|
|
|   | . |   |   |
|
|   |   |
|
|
|
|
|
|   |
|   |   |
|
|   |   |   |   |
|   |
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
| Template Conservation |   |
|
|   |
|
|
|   |
|
|
|
|
|   |
|
|   |
|   |   |   |
|
|
|   |
|   |
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
| Template Sequence |   |
A | L | A | A | A | R | L | K | X | Q | E | E | L | N | A | Q | V | E | K | H | K | E | K | L | K | Q | L | E | E | E | K | . |
. |
. |
. |
. |
R | R | Q | K | I | E |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
|
|
|
|
. | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|