31 c1q1cA_ Probab=99.67   E-value=1.8e-15  Score=106.87  Aligned_columns=131  Identities=23%

Q ss_pred             CCCCCCCCEEEEEEEEEECCCCEEECCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCC-CHHHEE
Q ss_conf             6426688889999999988985985031567547875089862146788750189997799998230048757-876703
Q batch____         2 SESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVP-SPDLIQ   80 (149)
Q Consensus         2 ~~~i~~gd~V~i~Y~~~~~dG~v~dst~~~~~p~~~~~G~~~~i~gle~~l~gm~~Ge~~~~~ipp~~ayG~~-d~~~v~   80 (149)
                      .+.+++||.|.+||++++.||++|+||+.++.|+.+.+|.+++++||+++|.+|++|+++++.|||++|||+. .+..+.
T Consensus        24 ~~~p~~Gd~V~v~y~~~~~dG~v~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~~~ip~~~ayg~~g~~~~ip  103 (237)
T c1q1cA_          24 TEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIP  103 (237)
T ss_dssp             SCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTTTBC
T ss_pred             CCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCEEEECCCCCHHHHHHHHHCCCCCCEEEEEEECHHHCCCCCCCCCCCC
T ss_conf             76778888899999999889979981336675269852885213368887535641014999986876034457766788


Q ss_pred             ECCHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCEEEEECCCCCCCCEEEEEEE
Q ss_conf             14466623336767774899876998778999999759989997778867872899999
Q batch____        81 YFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIE  139 (149)
Q Consensus        81 ~~~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~i~~i~~~~v~vD~NHPlAGk~L~f~ve  139 (149)
                      ....-.|  ...+..-............+...|++-.++     ..+|.+|..++...+
T Consensus       104 ~~~~l~~--~~~l~~~~~~~~~~~~~~~~~~~i~~~g~g-----~~~p~~gd~V~v~y~  155 (237)
T c1q1cA_         104 PNATLVF--EVELFEFKGEDLTEEEDGGIIRRIQTRGEG-----YAKPNEGAIVEVALE  155 (237)
T ss_dssp             TTCCEEE--EEEEEEEECEECCTTCSSSEEEEEEECCSC-----SCCCCTTCEEEEEEE
T ss_pred             CCCEEEE--ECCCCCCCCCCCCCCCCCEEEEEEEECCCC-----CCCCCCCCEEEEEEE
T ss_conf             7540466--313333333334455654058999862787-----658888888999998