Phyre 2 alignment of P09151 with d1tifa_

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Job Description | P09151
Confidence | 34.26% | Date | Thu Jan 5 11:01:59 GMT 2012
Rank | 411 | Aligned Residues | 42
% Identity | 36% | Template | d1tifa_
SCOP info | beta-Grasp (ubiquitin-like) | Translation initiation factor IF3, N-terminal domain | Translation initiation factor IF3, N-terminal domain
Resolution | 1.80

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | Q | Q | V | I | I | F | D | T | T | L | R | D | G | E | Q | A | L | Q | A | S | L | S | V | K | E | K | L | Q | I | A | L | A | L | E | R | M | G | V | D | V | M | E | V | G | F | P | V | S | S | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template Sequence |  | A | R | E | V | R | L | I | D | Q | . | . | . | N | G | D | Q | L | . | G | I | . | K | S | K | Q | E | A | L | E | I | A | A | R | R | . | . | . | N | L | D | L | V | L | V | . | A | P | N | A | K | P
Template Known Secondary structure |  |  | S |  |  |  |  |  |  | T | . | . | . | T | S |  |  |  | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | T |  |  |  |  |  |  | . |  | T | T | S | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 13 | . | . | . | . | . | . | 20 | . |  |  |  | . | . | . | . | . |  | . | . |  | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . |  |  |  | . | . | . | . | . | . | . |  | . | 50 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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