234 c1qapA_ Probab=78.05   E-value=4.7  Score=19.38  Aligned_columns=132  Identities=15%

Q ss_pred             HHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC---CCEEEECCCCCCCCHH-----HHHHHHHHHHH
Q ss_conf             999999999999967965999765266799899999999999559---9899982875668989-----99999999998
Q batch____       118 VIERAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAINAG---ATTINIPDTVGYTMPF-----EFAGIISGLYE  189 (523)
Q Consensus       118 ~~~~~~~~v~~ak~~g~~v~~~~ed~~r~~~e~l~~~~~~a~~~G---ad~I~L~DT~G~~~P~-----~v~~lv~~l~~  189 (523)
                      +--.+..++..++.....+     ..+|-....+..+.+.+.-.|   ..++.|.|++-.-.++     .+.+.++.+++
T Consensus       123 IAT~t~~~v~~a~~~~~~i-----~~TRKt~Pg~r~~~~~Av~~GG~~~hR~~L~d~ilik~nHi~~~g~~~~av~~~r~  197 (289)
T c1qapA_         123 VASEVRRYVGLLAGTQTQL-----LDTRKTLPGLRTALKYAVLCGGGANHRLGLTDAFLIKENHIIASGSVRQAVEKAFW  197 (289)
T ss_dssp             HHHHHHHHHHTTTTSSCEE-----ECCSCCCTTCHHHHHHHHHHHTCBCCCSSSSSCEEECHHHHHHHSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCEEE-----EECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHCCCHHHHHHHHHH
T ss_conf             9999999999617997799-----85456894389999999872695210000121111220356631518999999998


Q ss_pred             HCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCC--CCCCCHHHHH
Q ss_conf             56676773799995488774079999998739749874010118534775589999999840366666--6788989999
Q batch____       190 RVPNIDKAIISVHTHDDLGLAVGNSLAAVHAGARQVEGAMNGIGERAGNCSLEEVIMAIKVRKDILNV--HTAINHQEIW  267 (523)
Q Consensus       190 ~lp~~~~v~i~~H~HNd~GlAvANslaAi~aGa~~vd~Ti~GlGERaGNa~lE~vv~~L~~~~~~~g~--~t~idl~~L~  267 (523)
                      ..|   ..++.+-++|     ...+..|+.+|++.|         +-.|.+.+++-..++.......+  .-||+.+.+.
T Consensus       198 ~~p---~~~I~Vevdt-----~eea~eA~~~gad~I---------~LD~~~~~~lk~~v~~i~~~v~I~aSGGI~~~ni~  260 (289)
T c1qapA_         198 LHP---DVPVEVEVEN-----LDELDDALKAGADII---------MLDNFNTDQMREAVKRVNGQARLEVSGNVTAETLR  260 (289)
T ss_dssp             HST---TSCEEEEESS-----HHHHHHHHHTTCSEE---------EESSCCHHHHHHHHHTTCTTCCEEECCCSCHHHHH
T ss_pred             HCC---CCEEEEEECC-----HHHHHHHHHCCCCEE---------EECCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHH
T ss_conf             589---9829999669-----899999985599899---------98699989999999962887469998899989999


Q ss_pred             HHHH
Q ss_conf             9999
Q batch____       268 RTSQ  271 (523)
Q Consensus       268 ~is~  271 (523)
                      +.++
T Consensus       261 ~~a~  264 (289)
T c1qapA_         261 EFAE  264 (289)
T ss_dssp             HHHH
T ss_pred             HHHH
T ss_conf             9995