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| Job Description | P77559 | | Confidence | 93.31% | Date | Thu Jan 5 12:30:33 GMT 2012 |
| Rank | 160 | Aligned Residues | 47 |
| % Identity | 9% | Template | c1h0mD_ |
| PDB info |
PDB header:transcription/dna | Chain: D: PDB Molecule:transcriptional activator protein trar; |
PDBTitle: three-dimensional structure of the quorum sensing protein2 trar bound to its autoinducer and to its target dna
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| Resolution | 3.0 Å |
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| Predicted Secondary structure |   |
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| Query Sequence |   |
N | I | E | L | R | H | L | R | Y | F | V | A | V | A | E | E | L | H | F | G | R | A | A | A | R | L | N | I | S | Q | P | P | L | S | Q | Q | I | Q | A | L | E | Q | Q | I | G | A | R |
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| Template Conservation |   |
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| Template Sequence |   |
W | L | D | P | K | E | A | T | Y | L | R | W | I | A | V | G | K | T | X | E | E | I | A | D | V | E | G | V | K | Y | N | S | V | R | V | K | L | R | E | A | X | K | R | F | D | V | R |
| Template Known Secondary structure |   |
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| Template Predicted Secondary structure |   |
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173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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