BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (71 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_B5YTY8 Conserved domain protein n=2 Tax=Escherichia col... 94 9e-19 UniRef50_B1XBH4 Lysis S family protein n=2 Tax=Enterobacteriacea... 74 1e-12 UniRef50_C8T826 Putative uncharacterized protein n=1 Tax=Klebsie... 69 3e-11 UniRef50_B4AC67 Conserved domain protein n=1 Tax=Salmonella ente... 60 2e-08 UniRef50_D2AA42 Lysis protein S n=2 Tax=Shigella flexneri RepID=... 45 6e-04 UniRef50_Q1I0Z2 Hol n=1 Tax=Pasteurella phage F108 RepID=Q1I0Z2_... 40 0.017 UniRef50_A7MNN3 Putative uncharacterized protein n=1 Tax=Cronoba... 38 0.087 >UniRef50_B5YTY8 Conserved domain protein n=2 Tax=Escherichia coli O157:H7 RepID=B5YTY8_ECO5E Length = 54 Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 43/50 (86%), Positives = 47/50 (94%) Query: 22 FWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDRRKAARGE 71 +W LQLLDKV+PSQW AIGVLGSL+FGLLTYLTNLYFKI+EDRRK ARGE Sbjct: 5 YWLLQLLDKVSPSQWVAIGVLGSLLFGLLTYLTNLYFKIREDRRKVARGE 54 >UniRef50_B1XBH4 Lysis S family protein n=2 Tax=Enterobacteriaceae RepID=B1XBH4_ECODH Length = 74 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 4/72 (5%) Query: 1 MKSMDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKI 60 M MDKLTTG AYG SAG+ +L+ +P QW AIGVL ++ ++TYLTNLYFKI Sbjct: 1 MYRMDKLTTGAAYGASAGSI---LNGMLNAYSPEQWNAIGVLVGIIIAVMTYLTNLYFKI 57 Query: 61 KED-RRKAARGE 71 +ED RR +R E Sbjct: 58 REDNRRSRSRDE 69 >UniRef50_C8T826 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T826_KLEPR Length = 71 Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/71 (49%), Positives = 43/71 (60%) Query: 1 MKSMDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKI 60 MK +++ + YGTS +A +W QLLD TP QWAAIGV+GSL F LT N+YFK Sbjct: 1 MKMTHRVSEVITYGTSTVSATYWFSQLLDSYTPGQWAAIGVIGSLAFTALTAFVNIYFKW 60 Query: 61 KEDRRKAARGE 71 RR GE Sbjct: 61 LAYRRGKLSGE 71 >UniRef50_B4AC67 Conserved domain protein n=1 Tax=Salmonella enterica subsp. enterica serovar Newport str. SL317 RepID=B4AC67_SALNE Length = 71 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 3/61 (4%) Query: 4 MDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKED 63 MD+ TTG +YG SA + LD T +WAAIG++G L FG LT++TN+YF+ + + Sbjct: 1 MDRTTTGASYGVSAATMIY---SFLDSFTHDEWAAIGIMGGLFFGALTWITNVYFQRQRN 57 Query: 64 R 64 R Sbjct: 58 R 58 >UniRef50_D2AA42 Lysis protein S n=2 Tax=Shigella flexneri RepID=D2AA42_SHIF2 Length = 55 Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 19/30 (63%), Positives = 26/30 (86%) Query: 1 MKSMDKLTTGVAYGTSAGNAGFWALQLLDK 30 M M+K++TG+AYGTSAG+AG+W LQ LD+ Sbjct: 26 MYQMEKISTGIAYGTSAGSAGYWFLQWLDQ 55 >UniRef50_Q1I0Z2 Hol n=1 Tax=Pasteurella phage F108 RepID=Q1I0Z2_9CAUD Length = 70 Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust. Identities = 18/30 (60%), Positives = 22/30 (73%) Query: 36 WAAIGVLGSLVFGLLTYLTNLYFKIKEDRR 65 W IG + ++FGLLT LTN YFK KED+R Sbjct: 24 WGDIGAIFGILFGLLTVLTNWYFKRKEDKR 53 >UniRef50_A7MNN3 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MNN3_ENTS8 Length = 78 Score = 38.1 bits (87), Expect = 0.087, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 25/35 (71%) Query: 27 LLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIK 61 LL +++P +W+A+GV+ +V LLT+ N Y+K K Sbjct: 21 LLTRLSPDEWSAVGVIAGIVVALLTFGINWYYKRK 55 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B1XBH4 Lysis S family protein n=2 Tax=Enterobacteriacea... 93 2e-18 UniRef50_C8T826 Putative uncharacterized protein n=1 Tax=Klebsie... 91 1e-17 UniRef50_B5YTY8 Conserved domain protein n=2 Tax=Escherichia col... 80 2e-14 UniRef50_B4AC67 Conserved domain protein n=1 Tax=Salmonella ente... 80 2e-14 UniRef50_D2AA42 Lysis protein S n=2 Tax=Shigella flexneri RepID=... 45 5e-04 Sequences not found previously or not previously below threshold: UniRef50_C8SXC9 Putative uncharacterized protein n=1 Tax=Klebsie... 45 7e-04 UniRef50_Q1I0Z2 Hol n=1 Tax=Pasteurella phage F108 RepID=Q1I0Z2_... 41 0.011 UniRef50_A7MNN3 Putative uncharacterized protein n=1 Tax=Cronoba... 40 0.025 UniRef50_Q7Y3V4 Putative uncharacterized protein n=1 Tax=Yersini... 39 0.048 >UniRef50_B1XBH4 Lysis S family protein n=2 Tax=Enterobacteriaceae RepID=B1XBH4_ECODH Length = 74 Score = 93.3 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 4/72 (5%) Query: 1 MKSMDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKI 60 M MDKLTTG AYG SAG+ +L+ +P QW AIGVL ++ ++TYLTNLYFKI Sbjct: 1 MYRMDKLTTGAAYGASAGSI---LNGMLNAYSPEQWNAIGVLVGIIIAVMTYLTNLYFKI 57 Query: 61 KED-RRKAARGE 71 +ED RR +R E Sbjct: 58 REDNRRSRSRDE 69 >UniRef50_C8T826 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T826_KLEPR Length = 71 Score = 90.9 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 35/71 (49%), Positives = 43/71 (60%) Query: 1 MKSMDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKI 60 MK +++ + YGTS +A +W QLLD TP QWAAIGV+GSL F LT N+YFK Sbjct: 1 MKMTHRVSEVITYGTSTVSATYWFSQLLDSYTPGQWAAIGVIGSLAFTALTAFVNIYFKW 60 Query: 61 KEDRRKAARGE 71 RR GE Sbjct: 61 LAYRRGKLSGE 71 >UniRef50_B5YTY8 Conserved domain protein n=2 Tax=Escherichia coli O157:H7 RepID=B5YTY8_ECO5E Length = 54 Score = 80.2 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 43/50 (86%), Positives = 47/50 (94%) Query: 22 FWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDRRKAARGE 71 +W LQLLDKV+PSQW AIGVLGSL+FGLLTYLTNLYFKI+EDRRK ARGE Sbjct: 5 YWLLQLLDKVSPSQWVAIGVLGSLLFGLLTYLTNLYFKIREDRRKVARGE 54 >UniRef50_B4AC67 Conserved domain protein n=1 Tax=Salmonella enterica subsp. enterica serovar Newport str. SL317 RepID=B4AC67_SALNE Length = 71 Score = 79.8 bits (195), Expect = 2e-14, Method: Composition-based stats. Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 3/61 (4%) Query: 4 MDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKED 63 MD+ TTG +YG SA + LD T +WAAIG++G L FG LT++TN+YF+ + + Sbjct: 1 MDRTTTGASYGVSAATMIY---SFLDSFTHDEWAAIGIMGGLFFGALTWITNVYFQRQRN 57 Query: 64 R 64 R Sbjct: 58 R 58 >UniRef50_D2AA42 Lysis protein S n=2 Tax=Shigella flexneri RepID=D2AA42_SHIF2 Length = 55 Score = 45.5 bits (106), Expect = 5e-04, Method: Composition-based stats. Identities = 19/30 (63%), Positives = 26/30 (86%) Query: 1 MKSMDKLTTGVAYGTSAGNAGFWALQLLDK 30 M M+K++TG+AYGTSAG+AG+W LQ LD+ Sbjct: 26 MYQMEKISTGIAYGTSAGSAGYWFLQWLDQ 55 >UniRef50_C8SXC9 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8SXC9_KLEPR Length = 82 Score = 45.1 bits (105), Expect = 7e-04, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 30/61 (49%) Query: 1 MKSMDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKI 60 MK DK+ + +Y +S G + D W I + ++ G+ TYLTNLYFK Sbjct: 1 MKMPDKIFSAASYCSSGGLICTGLARTYDWFHGLDWNFIALASGVIIGVATYLTNLYFKR 60 Query: 61 K 61 + Sbjct: 61 R 61 >UniRef50_Q1I0Z2 Hol n=1 Tax=Pasteurella phage F108 RepID=Q1I0Z2_9CAUD Length = 70 Score = 41.2 bits (95), Expect = 0.011, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 32/63 (50%), Gaps = 9/63 (14%) Query: 4 MDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKED 63 M K T AY SA A F L W IG + ++FGLLT LTN YFK KED Sbjct: 1 MFKNTEQNAYFGSAVAAFFAQLS---------WGDIGAIFGILFGLLTVLTNWYFKRKED 51 Query: 64 RRK 66 +R Sbjct: 52 KRA 54 >UniRef50_A7MNN3 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MNN3_ENTS8 Length = 78 Score = 39.7 bits (91), Expect = 0.025, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 26/38 (68%) Query: 24 ALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIK 61 A LL +++P +W+A+GV+ +V LLT+ N Y+K K Sbjct: 18 ANGLLTRLSPDEWSAVGVIAGIVVALLTFGINWYYKRK 55 >UniRef50_Q7Y3V4 Putative uncharacterized protein n=1 Tax=Yersinia phage PY54 RepID=Q7Y3V4_9CAUD Length = 88 Score = 38.9 bits (89), Expect = 0.048, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%) Query: 1 MKSM-DKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFK 59 MK+M +K+ YG G+ F L+ +PS+W +G+L +V ++ T ++FK Sbjct: 1 MKNMQEKIADNALYGGGIGSVLF---GLITYFSPSEWMVLGILVGIVTTIIGCGTGIWFK 57 Query: 60 IKE 62 + Sbjct: 58 CQR 60 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B1XBH4 Lysis S family protein n=2 Tax=Enterobacteriacea... 95 7e-19 UniRef50_C8T826 Putative uncharacterized protein n=1 Tax=Klebsie... 88 6e-17 UniRef50_C8SXC9 Putative uncharacterized protein n=1 Tax=Klebsie... 87 1e-16 UniRef50_B5YTY8 Conserved domain protein n=2 Tax=Escherichia col... 80 2e-14 UniRef50_B4AC67 Conserved domain protein n=1 Tax=Salmonella ente... 79 6e-14 Sequences not found previously or not previously below threshold: UniRef50_D2AA42 Lysis protein S n=2 Tax=Shigella flexneri RepID=... 44 0.002 UniRef50_Q1I0Z2 Hol n=1 Tax=Pasteurella phage F108 RepID=Q1I0Z2_... 42 0.005 UniRef50_B2HW61 Putative uncharacterized protein n=2 Tax=Acineto... 41 0.013 UniRef50_Q4QK06 Putative uncharacterized protein n=7 Tax=Haemoph... 41 0.016 UniRef50_A6XRP5 Conserved domain protein n=1 Tax=Vibrio cholerae... 41 0.017 UniRef50_A7MNN3 Putative uncharacterized protein n=1 Tax=Cronoba... 39 0.034 UniRef50_Q7Y3V4 Putative uncharacterized protein n=1 Tax=Yersini... 39 0.042 CONVERGED! >UniRef50_B1XBH4 Lysis S family protein n=2 Tax=Enterobacteriaceae RepID=B1XBH4_ECODH Length = 74 Score = 94.8 bits (234), Expect = 7e-19, Method: Composition-based stats. Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 4/72 (5%) Query: 1 MKSMDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKI 60 M MDKLTTG AYG SAG+ +L+ +P QW AIGVL ++ ++TYLTNLYFKI Sbjct: 1 MYRMDKLTTGAAYGASAGSI---LNGMLNAYSPEQWNAIGVLVGIIIAVMTYLTNLYFKI 57 Query: 61 KED-RRKAARGE 71 +ED RR +R E Sbjct: 58 REDNRRSRSRDE 69 >UniRef50_C8T826 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T826_KLEPR Length = 71 Score = 88.3 bits (217), Expect = 6e-17, Method: Composition-based stats. Identities = 35/71 (49%), Positives = 43/71 (60%) Query: 1 MKSMDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKI 60 MK +++ + YGTS +A +W QLLD TP QWAAIGV+GSL F LT N+YFK Sbjct: 1 MKMTHRVSEVITYGTSTVSATYWFSQLLDSYTPGQWAAIGVIGSLAFTALTAFVNIYFKW 60 Query: 61 KEDRRKAARGE 71 RR GE Sbjct: 61 LAYRRGKLSGE 71 >UniRef50_C8SXC9 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8SXC9_KLEPR Length = 82 Score = 87.5 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 30/61 (49%) Query: 1 MKSMDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKI 60 MK DK+ + +Y +S G + D W I + ++ G+ TYLTNLYFK Sbjct: 1 MKMPDKIFSAASYCSSGGLICTGLARTYDWFHGLDWNFIALASGVIIGVATYLTNLYFKR 60 Query: 61 K 61 + Sbjct: 61 R 61 >UniRef50_B5YTY8 Conserved domain protein n=2 Tax=Escherichia coli O157:H7 RepID=B5YTY8_ECO5E Length = 54 Score = 79.8 bits (195), Expect = 2e-14, Method: Composition-based stats. Identities = 43/50 (86%), Positives = 47/50 (94%) Query: 22 FWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDRRKAARGE 71 +W LQLLDKV+PSQW AIGVLGSL+FGLLTYLTNLYFKI+EDRRK ARGE Sbjct: 5 YWLLQLLDKVSPSQWVAIGVLGSLLFGLLTYLTNLYFKIREDRRKVARGE 54 >UniRef50_B4AC67 Conserved domain protein n=1 Tax=Salmonella enterica subsp. enterica serovar Newport str. SL317 RepID=B4AC67_SALNE Length = 71 Score = 78.6 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 3/61 (4%) Query: 4 MDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKED 63 MD+ TTG +YG SA + LD T +WAAIG++G L FG LT++TN+YF+ + + Sbjct: 1 MDRTTTGASYGVSAATMIY---SFLDSFTHDEWAAIGIMGGLFFGALTWITNVYFQRQRN 57 Query: 64 R 64 R Sbjct: 58 R 58 >UniRef50_D2AA42 Lysis protein S n=2 Tax=Shigella flexneri RepID=D2AA42_SHIF2 Length = 55 Score = 43.6 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 19/30 (63%), Positives = 26/30 (86%) Query: 1 MKSMDKLTTGVAYGTSAGNAGFWALQLLDK 30 M M+K++TG+AYGTSAG+AG+W LQ LD+ Sbjct: 26 MYQMEKISTGIAYGTSAGSAGYWFLQWLDQ 55 >UniRef50_Q1I0Z2 Hol n=1 Tax=Pasteurella phage F108 RepID=Q1I0Z2_9CAUD Length = 70 Score = 42.0 bits (97), Expect = 0.005, Method: Composition-based stats. Identities = 18/36 (50%), Positives = 22/36 (61%) Query: 31 VTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDRRK 66 W IG + ++FGLLT LTN YFK KED+R Sbjct: 19 FAQLSWGDIGAIFGILFGLLTVLTNWYFKRKEDKRA 54 >UniRef50_B2HW61 Putative uncharacterized protein n=2 Tax=Acinetobacter RepID=B2HW61_ACIBC Length = 97 Score = 40.9 bits (94), Expect = 0.013, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 9/55 (16%) Query: 12 AYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDRRK 66 YG G + + +D V+ S++ G+ T+LTNLYFK ++D+RK Sbjct: 24 TYGYVVGGSLIGVIGKIDW---------AVVFSILIGIATFLTNLYFKKRDDKRK 69 >UniRef50_Q4QK06 Putative uncharacterized protein n=7 Tax=Haemophilus influenzae RepID=Q4QK06_HAEI8 Length = 73 Score = 40.5 bits (93), Expect = 0.016, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 4 MDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKE 62 M + +Y ++G F ++ D + WA + + +V G+ T+L N Y+K K+ Sbjct: 1 MHDAPSKASY--TSGIFAFLIGRIADMFSNVNWADVASITGIVIGVATFLVNWYYKKKD 57 >UniRef50_A6XRP5 Conserved domain protein n=1 Tax=Vibrio cholerae AM-19226 RepID=A6XRP5_VIBCH Length = 70 Score = 40.5 bits (93), Expect = 0.017, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 9/61 (14%) Query: 3 SMDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKE 62 +K+++ +Y T+ AGF AL L D V+ L L+F LTY TN Y+K K Sbjct: 1 MQEKISSFCSYLTAGVFAGFGALTLQDWVS---------LLGLLFVALTYFTNRYYKKKS 51 Query: 63 D 63 Sbjct: 52 Y 52 >UniRef50_A7MNN3 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MNN3_ENTS8 Length = 78 Score = 39.3 bits (90), Expect = 0.034, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 26/38 (68%) Query: 24 ALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIK 61 A LL +++P +W+A+GV+ +V LLT+ N Y+K K Sbjct: 18 ANGLLTRLSPDEWSAVGVIAGIVVALLTFGINWYYKRK 55 >UniRef50_Q7Y3V4 Putative uncharacterized protein n=1 Tax=Yersinia phage PY54 RepID=Q7Y3V4_9CAUD Length = 88 Score = 39.0 bits (89), Expect = 0.042, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Query: 3 SMDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKE 62 +K+ YG G+ F + +PS+W +G+L +V ++ T ++FK + Sbjct: 4 MQEKIADNALYGGGIGSVLFGL---ITYFSPSEWMVLGILVGIVTTIIGCGTGIWFKCQR 60 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.128 0.344 Lambda K H 0.267 0.0393 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 380,450,858 Number of Sequences: 3077464 Number of extensions: 10890398 Number of successful extensions: 41801 Number of sequences better than 1.0e-01: 13 Number of HSP's better than 0.1 without gapping: 24 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 41766 Number of HSP's gapped (non-prelim): 31 length of query: 71 length of database: 1,040,396,356 effective HSP length: 43 effective length of query: 28 effective length of database: 908,065,404 effective search space: 25425831312 effective search space used: 25425831312 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 87 (38.2 bits)