Phyre 2 alignment of P0A8Q0 with c3katA_

Return to main results | Retrieve Phyre Job Id

Job Description | P0A8Q0
Confidence | 17.51% | Date | Wed Jan 25 15:20:18 GMT 2012
Rank | 12 | Aligned Residues | 15
% Identity | 13% | Template | c3katA_
PDB info | PDB header:apoptosis | Chain: A: PDB Molecule:nacht, lrr and pyd domains-containing protein 1; | PDBTitle: crystal structure of the card domain of the human nlrp12 protein, northeast structural genomics consortium target3 hr3486e
Resolution | 3.10 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | N | G | P | E | A | W | A | G | F | V | D | F | L | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | W | D | R | K | C | K | D | G | L | Y | Q | A | L | K
Template Known Secondary structure |  | G |  |  | T | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1435 | . | . | . | . | 1440 | . | . | . | . | . | . | . | . | .

Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format

View in Jmol

|  | Close Jmol

Send structure to FirstGlance for more viewing options

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions