Phyre 2 Results for P0A8Q0

Email | l.a.kelley@imperial.ac.uk
Description | P0A8Q0
Date | Wed Jan 25 15:20:18 GMT 2012
Unique Job ID | e0ed5233a5c75ad3

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1kf6c_ |
|  | 100.0 | 100 | Fold:Heme-binding four-helical bundle Superfamily:Fumarate reductase respiratory complex transmembrane subunits Family:Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
2 | d1nekd_ |
|  | 96.8 | 20 | Fold:Heme-binding four-helical bundle Superfamily:Fumarate reductase respiratory complex transmembrane subunits Family:Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
3 | d1nekc_ |
|  | 89.7 | 15 | Fold:Heme-binding four-helical bundle Superfamily:Fumarate reductase respiratory complex transmembrane subunits Family:Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
4 | d1kf6d_ |
|  | 75.1 | 17 | Fold:Heme-binding four-helical bundle Superfamily:Fumarate reductase respiratory complex transmembrane subunits Family:Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
5 | c1yq3C_ |
|  | 68.7 | 13 | PDB header:oxidoreductase Chain: C: PDB Molecule:succinate dehydrogenase cytochrome b, large subunit; PDBTitle: avian respiratory complex ii with oxaloacetate and ubiquinone
6 | d2bs2c1 |
|  | 32.7 | 12 | Fold:Heme-binding four-helical bundle Superfamily:Fumarate reductase respiratory complex transmembrane subunits Family:Fumarate reductase respiratory complex cytochrome b subunit, FrdC
7 | c2b1wA_ |
|  | 26.6 | 30 | PDB header:apoptosis Chain: A: PDB Molecule:caspase recruitment domain protein 4; PDBTitle: solution structure of the nod1 caspase activating and recruitment2 domain
8 | d1lg7a_ |
|  | 23.7 | 36 | Fold:VSV matrix protein Superfamily:VSV matrix protein Family:VSV matrix protein
9 | c2w2rA_ |
|  | 20.5 | 45 | PDB header:viral protein Chain: A: PDB Molecule:matrix protein; PDBTitle: structure of the vesicular stomatitis virus matrix protein
10 | d3ygsp_ |
|  | 20.0 | 25 | Fold:DEATH domain Superfamily:DEATH domain Family:Caspase recruitment domain, CARD
11 | c2nz7A_ |
|  | 19.0 | 33 | PDB header:apoptosis Chain: A: PDB Molecule:caspase recruitment domain-containing protein 4; PDBTitle: crystal structure analysis of caspase-recruitment domain2 (card) of nod1
12 | c3katA_ |
|  | 17.5 | 13 | PDB header:apoptosis Chain: A: PDB Molecule:nacht, lrr and pyd domains-containing protein 1; PDBTitle: crystal structure of the card domain of the human nlrp12 protein, northeast structural genomics consortium target3 hr3486e
13 | d3crda_ |
|  | 15.4 | 44 | Fold:DEATH domain Superfamily:DEATH domain Family:Caspase recruitment domain, CARD
14 | d1dgna_ |
|  | 14.1 | 25 | Fold:DEATH domain Superfamily:DEATH domain Family:Caspase recruitment domain, CARD
15 | c2kxwB_ |
|  | 13.5 | 44 | PDB header:calcium-binding protein/metal transport Chain: B: PDB Molecule:sodium channel protein type 2 subunit alpha; PDBTitle: structure of the c-domain fragment of apo calmodulin bound to the iq2 motif of nav1.2
16 | d1y9ba1 |
|  | 12.7 | 20 | Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:VCA0319-like
17 | c1p58F_ |
|  | 11.8 | 16 | PDB header:virus Chain: F: PDB Molecule:envelope protein m; PDBTitle: complex organization of dengue virus membrane proteins as revealed by2 9.5 angstrom cryo-em reconstruction
18 | c2q0oC_ |
|  | 10.9 | 11 | PDB header:transcription Chain: C: PDB Molecule:probable transcriptional repressor tram; PDBTitle: crystal structure of an anti-activation complex in bacterial quorum2 sensing
19 | c2h3oA_ |
|  | 9.9 | 24 | PDB header:membrane protein Chain: A: PDB Molecule:merf; PDBTitle: structure of merft, a membrane protein with two trans-2 membrane helices
20 | d1cy5a_ |
|  | 9.7 | 19 | Fold:DEATH domain Superfamily:DEATH domain Family:Caspase recruitment domain, CARD
21 | d1bw6a_ |
| not modelled | 9.5 | 38 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Centromere-binding
22 | c1wazA_ |
| not modelled | 8.4 | 24 | PDB header:transport protein Chain: A: PDB Molecule:merf; PDBTitle: nmr structure determination of the bacterial mercury2 transporter, merf, in micelles
23 | d2axtk1 |
| not modelled | 7.9 | 38 | Fold:Single transmembrane helix Superfamily:Photosystem II reaction center protein K, PsbK Family:PsbK-like
24 | c2y69W_ |
| not modelled | 7.1 | 19 | PDB header:electron transport Chain: W: PDB Molecule:cytochrome c oxidase polypeptide 7a1; PDBTitle: bovine heart cytochrome c oxidase re-refined with molecular2 oxygen
25 | d1kcfa2 |
| not modelled | 7.0 | 23 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Mitochondrial resolvase ydc2 catalytic domain
26 | c2voyB_ |
| not modelled | 6.9 | 15 | PDB header:hydrolase Chain: B: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium PDBTitle: cryoem model of copa, the copper transporting atpase from2 archaeoglobus fulgidus
27 | c1kcfB_ |
| not modelled | 6.0 | 23 | PDB header:hydrolase Chain: B: PDB Molecule:hypothetical 30.2 kd protein c25g10.02 in PDBTitle: crystal structure of the yeast mitochondrial holliday2 junction resolvase, ydc2
28 | c2l9mA_ |
| not modelled | 5.9 | 28 | PDB header:apoptosis inhibitor Chain: A: PDB Molecule:baculoviral iap repeat-containing protein 2; PDBTitle: structure of ciap1 card
29 | d1ic8a2 |
| not modelled | 5.9 | 30 | Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:POU-specific domain
30 | c2zidA_ |
| not modelled | 5.4 | 42 | PDB header:hydrolase Chain: A: PDB Molecule:dextran glucosidase; PDBTitle: crystal structure of dextran glucosidase e236q complex with2 isomaltotriose