Phyre 2 alignment of P0A8Q0 with c3bd1B_

Return to main results | Retrieve Phyre Job Id

Job Description | P0A8Q0
Confidence | 2.48% | Date | Wed Jan 25 15:20:18 GMT 2012
Rank | 76 | Aligned Residues | 24
% Identity | 13% | Template | c3bd1B_
PDB info | PDB header:transcription | Chain: B: PDB Molecule:cro protein; | PDBTitle: structure of the cro protein from putative prophage element xfaso 1 in2 xylella fastidiosa strain ann-1
Resolution | 1.40 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | E | L | A | P | K | A | A | N | I | I | V | K | D | E | K | M | G | P | E | P | I | I | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | G | V | R | Q | S | A | I | S | N | W | R | A | R | G | R | V | P | A | E | R | C | I | D
Template Known Secondary structure |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  | G | G | G |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions