28/01/2012 02:25:11 : INFO  : Run start: Sat Jan 28 02:25:10 GMT 2012
28/01/2012 02:25:15 : INFO  : Initialised job
28/01/2012 02:25:16 : INFO  : Renaming log file 'phyre2_20120128_022510.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/e0ed5233a5c75ad3/phyre_20120128_022510.log'
28/01/2012 02:25:17 : INFO  : Initialised job:
Sequence
>batch____
MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGF
VDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKSLWAVTVVA
TIVILFVALYW

28/01/2012 02:25:18 : INFO  : Checked sequence
28/01/2012 02:25:21 : INFO  : Finding homologues with PSI-BLAST
28/01/2012 02:25:22 : INFO  : PSI-BLAST 3 iterations
28/01/2012 02:26:02 : INFO  : PSI-BLAST 5 iterations
28/01/2012 02:26:39 : INFO  : Finished PSI-BLAST
28/01/2012 02:26:41 : INFO  : Running Buildali to generate a3m file
28/01/2012 02:28:28 : INFO  : Converting to HMM
28/01/2012 02:28:29 : INFO  : Calibrating HMM
28/01/2012 02:28:38 : INFO  : Searching HMM database
28/01/2012 02:31:21 : INFO  : Finished buildali
28/01/2012 02:31:22 : INFO  : Predicting secondary structure
28/01/2012 02:31:28 : INFO  : Predicted secondary structure (PSI-Pred)
28/01/2012 02:31:30 : INFO  : Predicting Disordered regions
28/01/2012 02:31:32 : INFO  : Predicted Disorder (Disopred)
28/01/2012 02:31:34 : INFO  : Running memsat_svm check
28/01/2012 02:33:16 : INFO  : Globular protein
28/01/2012 02:33:19 : INFO  : Predicted Transmembrane (memsat_svm) ID 'e0ed5233a5c75ad3'
28/01/2012 02:33:20 : INFO  : Initialising fold library search
28/01/2012 02:33:25 : INFO  : Initialised search input
28/01/2012 02:33:28 : INFO  : Building Ensemble models
28/01/2012 02:33:33 : INFO  : Building hh.d1kf6c_.model.1.pdb
28/01/2012 02:33:49 : INFO  : Building d1kf6c_.1.pdb
28/01/2012 02:34:03 : INFO  : Building d1nekd_.2.pdb
28/01/2012 02:34:16 : INFO  : Building d1nekc_.3.pdb
28/01/2012 02:34:29 : INFO  : Building d1kf6d_.4.pdb
28/01/2012 02:34:42 : INFO  : Building c1yq3C_.5.pdb
28/01/2012 02:34:57 : INFO  : Building d2bs2c1.6.pdb
28/01/2012 02:35:12 : INFO  : Building c2b1wA_.7.pdb
28/01/2012 02:35:24 : INFO  : Building d1lg7a_.8.pdb
28/01/2012 02:35:35 : INFO  : Building c2w2rA_.9.pdb
28/01/2012 02:35:48 : INFO  : Building d3ygsp_.10.pdb
28/01/2012 02:36:02 : INFO  : Building c2nz7A_.11.pdb
28/01/2012 02:36:13 : INFO  : Building c3katA_.12.pdb
28/01/2012 02:36:26 : INFO  : Building d3crda_.13.pdb
28/01/2012 02:36:40 : INFO  : Building d1dgna_.14.pdb
28/01/2012 02:36:54 : INFO  : Building c2kxwB_.15.pdb
28/01/2012 02:37:07 : INFO  : Building d1y9ba1.16.pdb
28/01/2012 02:37:22 : INFO  : Building c1p58F_.17.pdb
28/01/2012 02:37:37 : INFO  : Building c2q0oC_.18.pdb
28/01/2012 02:37:52 : INFO  : Building c2h3oA_.19.pdb
28/01/2012 02:38:07 : INFO  : Building d1cy5a_.20.pdb
28/01/2012 02:38:40 : INFO  : Finished HH model building
28/01/2012 02:38:42 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
28/01/2012 02:39:37 : INFO  : html domain output complete ID 'e0ed5233a5c75ad3'
28/01/2012 02:46:34 : INFO  : Run end  : Sat Jan 28 02:46:33 GMT 2012
