Phyre 2 alignment of P06983 with c2jl8S_

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Job Description | P06983
Confidence | 20.23% | Date | Wed Jan 25 15:20:12 GMT 2012
Rank | 79 | Aligned Residues | 41
% Identity | 22% | Template | c2jl8S_
PDB info | PDB header:ribosome | Chain: S: PDB Molecule:50s ribosomal protein l18; | PDBTitle: insights into translational termination from the structure2 of rf2 bound to the ribosome (part 4 of 4).3 this file contains the 50s subunit.
Resolution | 3.45 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . |  |  |  |  |  |  |  | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | W | L | R | A | L | V | G | A | P | D | G | S | Q | I | I | R | G | E | R | R | . | . | . | . | . | . | . | G | A | P | Q | D | A | E | Q | M | G | I | S | L | A | E | E | L | L | N | N | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | H | I | Y | A | Q | I | I | D | D | E | K | G | V | T | L | V | S | A | S | S | L | A | L | K | L | K | G | N | K | T | E | V | A | R | Q | V | G | R | A | L | A | E | K | A | L | A | L | G
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  | S | G | G | G |  |  |  | S |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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