17 c3okaA_ Probab=97.65   E-value=0.0038  Score=37.13  Aligned_columns=306  Identities=11%

Q ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCC
Q ss_conf             47999999999999975998999998844799986199864999935843232146899999999984029989999888
Q batch____         5 GDMLLTTPVISTLKQNYPDAKIDMLLYQDTIPILSENPEINALYGISNKGAGTFDKIKNVLSLIKTLRANNYDLVINLTD   84 (344)
Q Consensus         5 GD~i~~~p~i~~lk~~~P~~~I~~l~~~~~~~l~~~~p~i~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~vi~~~~   84 (344)
                      |=...+..+++.|.++  +.++++++.............--.++.++...  ..........+.+.+++.++|+++....
T Consensus        17 G~~~~~~~l~~~L~~~--g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~dii~~~~~   92 (378)
T c3okaA_          17 GIQSYLRDFIATQDPE--SIVVFASTQNAEEAHAYDKTLDYEVIRWPRSV--MLPTPTTAHAMAEIIREREIDNVWFGAA   92 (378)
T ss_dssp             HHHHHHHHHHHTSCGG--GEEEEEECSCHHHHHHHHTTCSSEEEEESSSS--CCCCHHHHHHHHHHHHHTTCSEEEESSC
T ss_pred             HHHHHHHHHHHHHHHC--CCEEEEEECCCCCCCCHHCCCCCEEEECCCCC--CCCCHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf             0899999999999877--97899995788763301102782699835643--3451789999999998619989998186


Q ss_pred             CCCHHHHHHHHCCCEEEEECCCCCCCCCHHHCCCCCCC--------CCCCCHHHHHHHHHHHCCCCCCC-------CCCC
Q ss_conf             65078999972898799906777443200100122467--------65444899999999871998776-------5656
Q batch____        85 QWMVALLVRCLPARMKISQLYGHRQHGIWKKSFTHLAP--------IHGTHIVERNLSVLEPLGITDFY-------TDTT  149 (344)
Q Consensus        85 ~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~g~~~~~-------~~~~  149 (344)
                      ......................+...............        .......+.....+...+.....       ....
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (378)
T c3okaA_          93 APLALMAGTAKQAGASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVK  172 (378)
T ss_dssp             TTGGGGHHHHHHTTCSEEEEECCSCSSSTTCCTTHHHHHHHHHHHCSEEEESCHHHHHHHTTTTCSSSEEEECCCCBCTT
T ss_pred             CHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf             40467898875317956999816862023455689999999861187999989899999998438776430023576544


Q ss_pred             CCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCC
Q ss_conf             68887889999988773688887899970899841248989999999999961995999927996689999999973589
Q batch____       150 MSYAEDCWKKMRRELDALGVKDHYVVIQPTARQIFKCWDNDKFSKVIDALQQRGYQVVLTCGPSADDLACVDEIARGCET  229 (344)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~a~~~~k~w~~e~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  229 (344)
                      ........................+++..|...+.|.  .+.....+..+........++..++........+.......
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~k~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (378)
T c3okaA_         173 RFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKG--QDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQ  250 (378)
T ss_dssp             TSCCCCHHHHHHHHHHHTCCTTCCEEEEESCSSGGGC--HHHHHHHHHHHHHHCTTCEEEEECCCTTHHHHHHHTGGGGG
T ss_pred             CCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCC--HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf             3455565203454553068778628985301675421--12346889887640688405753387526789999840213


Q ss_pred             CCEEEECCCCCHHHHHHHHHHCCEEEECCC------------HHHHHHHHCCCCEEEEECCCCHHHCCCCCCCEEEEEEC
Q ss_conf             989990788899999999985788998593------------79999997499899997799866607688982899707
Q batch____       230 KPITGLAGKTRFPELGALIDHAVLFIGVDS------------APGHIAAAVKTPVISLFGATDHVFWRPWTENIIQFWAG  297 (344)
Q Consensus       230 ~~~~~l~g~~sl~el~~li~~~~l~I~~Ds------------g~~HlA~alg~P~i~l~g~~~~~~~~p~~~~~~~~~~~  297 (344)
                        .+...+..+..++....+.++.++....            -.+--|.++|+|+|+--.+..++.... + +...+.+.
T Consensus       251 --~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~eg~~~~~lEAma~G~PvI~s~~gg~~e~i~~-~-~g~l~~~~  326 (378)
T c3okaA_         251 --NVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTP-A-TGLVVEGS  326 (378)
T ss_dssp             --GEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCCSCHHHHHHHHTTCCEEEESSTTGGGGCCT-T-TEEEECTT
T ss_pred             --CEEECCCCCCCCHHHHHHHCCEEEECCCCCCCCCCCCCCEEHHHHCCCCCCEEEECCCCCHHHHHCC-C-CEEEECCC
T ss_conf             --3257144001101333540212660121135765666521011110258823896188726875128-9-63997599


Q ss_pred             CCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHCC
Q ss_conf             87768755667887378762899999999998601541147507
Q batch____       298 NYQKMPTRHELDRNKKYLSVIPAEDVIAATEKLLPEDAPSADRN  341 (344)
Q Consensus       298 ~~~~~~~~~~~~~~~~c~~~I~~e~V~~~i~~lL~~~~~~~~~~  341 (344)
                      .                     +++..+++.+++++.+-....+
T Consensus       327 d---------------------~~~la~~i~~ll~~~~~~~~~~  349 (378)
T c3okaA_         327 D---------------------VDKLSELLIELLDDPIRRAAMG  349 (378)
T ss_dssp             C---------------------HHHHHHHHHHHHTCHHHHHHHH
T ss_pred             C---------------------HHHHHHHHHHHHCCHHHHHHHH
T ss_conf             9---------------------8999999999984889999999