304 c1vmaA_ Probab=98.02   E-value=1.8e-05  Score=48.48  Aligned_columns=128  Identities=23%

Q ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHCCCEEECCCCCCEEEEEECC-------HHHHCCCEEEEEEEEEEE----------
Q ss_conf             489579999859998987878777313203226765302342033-------334206756855589997----------
Q batch____         9 TKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNA-------PEEKARGITINTSHVEYD----------   71 (394)
Q Consensus         9 ~k~~i~i~i~GhvdaGKSTL~~~L~~~~~~~~~~~~~~~~~~d~~-------~~E~~~giTi~~~~~~~~----------   71 (394)
                      .+++-.|+++|..++||||++..|.......+.+..--+..+.+.       ..-+.-|+........-+          
T Consensus        89 ~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~gA~eQL~~~a~~~~v~~~~~~~~~~~~~~~~~~~~  168 (294)
T c1vmaA_          89 PEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPAAVAFDAVA  168 (294)
T ss_dssp             SSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCSTTCCHHHHHHHHHH
T ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHH
T ss_conf             78966999980688760248999999999679948999758768647999999997619828974883698999999999


Q ss_pred             ---CCCCEEEEEECHHHHHHHHHHHHHHHH------------CCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf             ---199069885267688889999998642------------88599999758753267899999999849984899988
Q batch____        72 ---TPTRHYAHVDCPGHADYVKNMITGAAQ------------MDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLN  136 (394)
Q Consensus        72 ---~~~~~i~~iD~pGh~~~~~~~~~~~~~------------~d~~ilvv~a~~g~~~~t~e~l~~~~~~g~~~~IvviN  136 (394)
                         ..++.+.+|||||.-.+-...+..+..            .|..+||++|..+ .....+.......+++..+|  +|
T Consensus       169 ~~~~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~-~~~~~~~~~~~~~~~~~~iI--lT  245 (294)
T c1vmaA_         169 HALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTG-QNGLVQAKIFKEAVNVTGII--LT  245 (294)
T ss_dssp             HHHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGH-HHHHHHHHHHHHHSCCCEEE--EE
T ss_pred             HHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC-HHHHHHHHHHHHCCCCCEEE--EE
T ss_conf             9997799899981888987857999999999999630356688539998114687-89999999996308997699--97


Q ss_pred             CCC
Q ss_conf             621
Q batch____       137 KCD  139 (394)
Q Consensus       137 K~D  139 (394)
                      |+|
T Consensus       246 KlD  248 (294)
T c1vmaA_         246 KLD  248 (294)
T ss_dssp             CGG
T ss_pred             CCC
T ss_conf             444