271 c1tndA_ Probab=98.46   E-value=1.4e-06  Score=54.63  Aligned_columns=182  Identities=21%

Q ss_pred             EEEEEECCCCCCHHHHHHHH------------------------------------------------------------
Q ss_conf             79999859998987878777------------------------------------------------------------
Q batch____        13 VNVGTIGHVDHGKTTLTAAI------------------------------------------------------------   32 (394)
Q Consensus        13 i~i~i~GhvdaGKSTL~~~L------------------------------------------------------------   32 (394)
                      ++|.++|.-+|||||++..+                                                            
T Consensus         4 ikiLlLG~~eSGKST~~KQ~k~i~~~~f~~~E~~~~~~~I~~Nii~~~~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~   83 (323)
T c1tndA_           4 VKLLLLGAGESGKSTIVKQMKIIHQDGYSLEECLEFIAIIYGNTLQSILAIVRAMTTLNIQYGDSARQDDARKLMHMADT   83 (323)
T ss_dssp             EEEEEECSTTSSHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTHHHHHHHHHHHTTT
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
T ss_conf             89999738988888999999999678999899998799999999999999999998709998882136879998730134


Q ss_pred             --------------------------------------HCCCEEECCCCCCEEEEEECCHHHHCCCEEEEEEEEEEECCC
Q ss_conf             --------------------------------------313203226765302342033334206756855589997199
Q batch____        33 --------------------------------------TTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPT   74 (394)
Q Consensus        33 --------------------------------------~~~~~~~~~~~~~~~~~~d~~~~E~~~giTi~~~~~~~~~~~   74 (394)
                                                            ...-.....+........-..+.=+-|..|..+....|..++
T Consensus        84 ~~~~~~~~e~~~~I~~LW~d~~iq~~~~r~~e~~l~d~~~YFl~~i~RI~~~~Y~Pt~~Dil~~r~~T~Gi~~~~f~~~~  163 (323)
T c1tndA_          84 IEEGTMPKEMSDIIQRLWKDSGIQACFDRASEYQLNDSAGYYLSDLERLVTPGYVPTEQDVLRSRVKTTGIIETQFSFKD  163 (323)
T ss_dssp             SCTTCCCHHHHHHHHHHHHSHHHHHHHTTGGGSCCCTTHHHHHTTHHHHTSTTCCCCHHHHHHCCCCCCSEEEEEEEETT
T ss_pred             CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEECC
T ss_conf             56222598999999998569899999873541042222456676678741545477864458985350241799997357


Q ss_pred             CEEEEEECHHHHHHHHHHHHHHHHCCEEEEEEECCC-----------CCHHHHHHHHHHHHH---CCCCCEEEEEECCCC
Q ss_conf             069885267688889999998642885999997587-----------532678999999998---499848999886215
Q batch____        75 RHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATD-----------GPMPQTREHILLGRQ---VGVPYIIVFLNKCDM  140 (394)
Q Consensus        75 ~~i~~iD~pGh~~~~~~~~~~~~~~d~~ilvv~a~~-----------g~~~~t~e~l~~~~~---~g~~~~IvviNK~D~  140 (394)
                      ..+.++|++|++...+.+......++++++||+..+           .....+.+.+.-+..   +...++++++||+|+
T Consensus       164 ~~~~~~DvgGq~~~R~kW~~~f~~v~~iifvv~lsd~d~~~~e~~~~nrl~esl~~f~~i~~~~~~~~~~iil~lNK~Di  243 (323)
T c1tndA_         164 LNFRMFDVGGQRSERKKWIHCFEGVTCIIFIAALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTSIVLFLNKKDV  243 (323)
T ss_dssp             EEEEEEEECCSHHHHGGGGGGCTTCSEEEEEEEGGGGGCBCSSCTTSBHHHHHHHHHHHHHTCSGGGSCEEEEEEECHHH
T ss_pred             EEEEEEECCCCCCCCHHHHHHHCCCCEEEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCEEEEECCHHH
T ss_conf             04889977898743323688736998899997811414422256740358999999999827968779978999325589


Q ss_pred             -----------------CCCHHHHHHHHHHHHHHHHHCCCCCC-CEEEEEEECCCCCCCCCCCCCCHHHHHH
Q ss_conf             -----------------87278799999999998875297412-6349980023676655420046488999
Q batch____       141 -----------------VDDEELLELVEMEVRELLSQYDFPGD-DTPIVRGSALKALEGDAEWEAKILELAG  194 (394)
Q Consensus       141 -----------------~~~~e~~~~i~~~i~~~l~~~~~~~~-~i~~vpvsa~~g~~~~~~~~~~~~~l~~  194 (394)
                                       ..++...+.++.-..+++........ .+.+..++|....+...........++.
T Consensus       244 f~~Kl~~~~l~~~fp~y~g~~~~~~~~~~i~~~F~~~~~~~~~r~~~~~~t~a~d~~~i~~v~~~v~~~i~~  315 (323)
T c1tndA_         244 FSEKIKKAHLSICFPDYNGPNTYEDAGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVTDIIIK  315 (323)
T ss_dssp             HHHHHTTSCGGGTCTTCCSCCCHHHHHHHHHHHHHTTCTTBTTBCCEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHH
T ss_conf             987604488344067889978989999999999998523778973899998511068999999999999999