118 c1jalA_ Probab=99.43   E-value=4.6e-13  Score=90.84  Aligned_columns=194  Identities=22%

Q ss_pred             EEEEEECCCCCCHHHHHHHHHCCCEEECCCCCCEEEEEECCHHHHCCCEEEEEEEEEEECCCCE----------------
Q ss_conf             7999985999898787877731320322676530234203333420675685558999719906----------------
Q batch____        13 VNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRH----------------   76 (394)
Q Consensus        13 i~i~i~GhvdaGKSTL~~~L~~~~~~~~~~~~~~~~~~d~~~~E~~~giTi~~~~~~~~~~~~~----------------   76 (394)
                      +.|+++|.+|+|||||+|+|++.                      ....|++........++..                
T Consensus         3 ~~iglvG~pn~GKSTl~n~LT~~----------------------~pf~Ti~pn~g~v~v~d~~~~~~~~~~~~~~~~~~   60 (348)
T c1jalA_           3 FKCGIVGLPNVGKSTLFNALTKA----------------------GPFCTIEPNTGVVPMPDPRLDALAEIVKPERILPT   60 (348)
T ss_dssp             CEEEEECCTTSSHHHHHHHHHHT----------------------CCCCCCCCCSSEEECCCHHHHHHHHHHCCSEEECC
T ss_pred             EEEEEEECCCCCHHHHHHHHHCC----------------------CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf             28999638898898999999578----------------------98643366206999568675200012355545780


Q ss_pred             -EEEEECHH-------HHHHHHHHHHHHHHCCEEEEEEECCCCC------------------------------------
Q ss_conf             -98852676-------8888999999864288599999758753------------------------------------
Q batch____        77 -YAHVDCPG-------HADYVKNMITGAAQMDGAILVVAATDGP------------------------------------  112 (394)
Q Consensus        77 -i~~iD~pG-------h~~~~~~~~~~~~~~d~~ilvv~a~~g~------------------------------------  112 (394)
                       +.++|+||       .+.+.+..+..+..+|..++|||+.++.                                    
T Consensus        61 ~i~liD~pGl~~~a~~g~~~~~~~l~~ir~aD~ii~Vvd~~~~~dp~~d~~~i~~EL~~~d~~~~~k~~~~~~~~~~~~~  140 (348)
T c1jalA_          61 TMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENIDPLDDIDTINTELALADLDSCERAIQRLQKRAKGGD  140 (348)
T ss_dssp             EEEEEECCSCCTTHHHHGGGTCCHHHHHHTCSEEEEEEECSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             EEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCC
T ss_conf             59999757655786421037999999997489899995058899878999999999986088876312788864210256


Q ss_pred             ----------------------------HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             ----------------------------2678999999998499848999886215872787999999999988752974
Q batch____       113 ----------------------------MPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFP  164 (394)
Q Consensus       113 ----------------------------~~~t~e~l~~~~~~g~~~~IvviNK~D~~~~~e~~~~i~~~i~~~l~~~~~~  164 (394)
                                                  .....+.+.-...+..+|+++++||+|...+.   ++....+....+.    
T Consensus       141 ~~~~~~~~~l~~i~~~l~~~~~~~~~~l~~~e~~~l~~~~~l~~KP~i~v~Nk~d~~~~~---~~~~~~i~~~~~~----  213 (348)
T c1jalA_         141 KEAKFELSVMEKILPVLENAGMIRSVGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFEN---NPYLDRVREIAAK----  213 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCGGGSCCCHHHHHHHGGGCCSTTSCEEEEEECCTTCSSS---CHHHHHHHHHHHH----
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEECCCEEEEEECCCCCCCC---CHHHHHHHHHHHC----
T ss_conf             652136899999997310244333346898899998643311007889999711036553---2378999998513----


Q ss_pred             CCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEECCC
Q ss_conf             126349980023676655420046488999998504363234455305631015642883179999984287
Q batch____       165 GDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGI  236 (394)
Q Consensus       165 ~~~i~~vpvsa~~g~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~g~G~vv~G~v~~G~  236 (394)
                       .+.+++|+||.................+.......+...+....-++..=.-.|.-.|.-.+=.-.+..|.
T Consensus       214 -~~~~vi~vsa~~E~el~~l~~~e~~~~l~~~~i~~~~l~~l~~~~~~~L~li~~ft~g~de~ra~~i~~gs  284 (348)
T c1jalA_         214 -EGAVVVPVCAAIESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGA  284 (348)
T ss_dssp             -TTCEEEEECHHHHHHGGGSCSSTTHHHHTTSSCCSCTTHHHHHHHHHHTTEEEEEEECSSEEEEEEEETTC
T ss_pred             -CCCCEEEECHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEECCCC
T ss_conf             -79829997389999887337556688776708762148999999985218534424687756434503898