333 c3fluD_ Probab=50.78   E-value=17  Score=16.14  Aligned_columns=162  Identities=8%

Q ss_pred             HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH---CCCEEEEEECCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             8999999998099989975246421223259998999999999987---1984889854677778776799899999999
Q batch____        19 WPERLVLAKSCGFDFVEMSVDETDERLSRLDWSAAQRTSLVAAMIE---TGVGIPSMCLSAHRRFPFGSRDEAVRERARE   95 (286)
Q Consensus        19 ~~~~~~~a~~~Gf~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~gl~i~~~~~~~~~~~~~~~~d~~~r~~~~~   95 (286)
                      +.+.++..-+.|.+|+=+.........    .+.++++++-+.+.+   ..+++..-.....                .+
T Consensus        26 ~~~~~~~l~~~Gv~gi~~~G~tGE~~~----Ls~~Er~~i~~~~~~~~~~~~~vi~gv~~~~----------------~~   85 (293)
T c3fluD_          26 LRDLIDWHIENGTDGIVAVGTTGESAT----LSVEEHTAVIEAVVKHVAKRVPVIAGTGANN----------------TV   85 (293)
T ss_dssp             HHHHHHHHHHTTCCEEEESSTTTTGGG----SCHHHHHHHHHHHHHHHTTSSCEEEECCCSS----------------HH
T ss_pred             HHHHHHHHHHCCCCEEEECCCCCCHHH----CCHHHHHHHHHHHHHHCCCCCEEEEECCCCC----------------HH
T ss_conf             999999999779989998772357021----7999999999999996089973999658899----------------99


Q ss_pred             HHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf             99999999766189899991155888898089999999999999987421327999851332325898999999997400
Q batch____        96 IMSKAIRLARDLGIRTIQLAGYDVYYEDHDEGTRQRFAEGLAWAVEQAAASQVMLAVEIMDTAFMNSISKWKKWDEMLAS  175 (286)
Q Consensus        96 ~~~~~i~~a~~lg~~~i~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~a~~~gv~i~lE~~~~~~~~~~~~~~~ll~~~~~  175 (286)
                      ...+..+.|+++|+..+.+.+........     +.+++.++++++.. ...+-+.-.|......-+++...++.+   .
T Consensus        86 ~~i~~a~~a~~~Gad~v~~~pP~~~~~s~-----~~i~~~~~~ia~~~-~~pi~~Yn~P~~tg~~~s~~~~~~L~~---~  156 (293)
T c3fluD_          86 EAIALSQAAEKAGADYTLSVVPYYNKPSQ-----EGIYQHFKTIAEAT-SIPMIIYNVPGRTVVSMTNDTILRLAE---I  156 (293)
T ss_dssp             HHHHHHHHHHHHTCSEEEEECCCSSCCCH-----HHHHHHHHHHHHTC-CSCEEEEECHHHHSSCCCHHHHHHHTT---S
T ss_pred             HHHHHHHHHHHCCCCEEEECCCCCCCCCH-----HHHHHHHHHHHHHC-CCCEEEEECCCCCCCCCCHHHHHHHHC---C
T ss_conf             99999999985499899993887889998-----89999999999754-998999967533367759899999834---7


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEC
Q ss_conf             2323153310001024898999863034378987312
Q batch____       176 PWFTVYPDVGNLSAWGNDVPAELKLGIDRIAAIHLKD  212 (286)
Q Consensus       176 ~~~~~~~d~~h~~~~~~~~~~~~~~~~~~i~~vH~~D  212 (286)
                      +++...-|...   .-....+.++...+.+....-.|
T Consensus       157 ~~v~giK~s~~---d~~~~~~l~~~~~~~~~v~~G~d  190 (293)
T c3fluD_         157 PNIVGVKEASG---NIGSNIELINRAPEGFVVLSGDD  190 (293)
T ss_dssp             TTEEEEEECSC---CHHHHHHHHHHSCTTCEEEECCG
T ss_pred             CCEEEEECCCC---CHHHHHHHHHHCCCCEEEEECCH
T ss_conf             98889963889---98999999986399879994877