127 c1vliA_ Probab=85.48   E-value=2.5  Score=21.07  Aligned_columns=129  Identities=16%

Q ss_pred             HHHHHHHHHHCCCEEEEECCCCCCCCCCC------------CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCH
Q ss_conf             99999999809998997524642122325------------999899999999998719848898546777787767998
Q batch____        20 PERLVLAKSCGFDFVEMSVDETDERLSRL------------DWSAAQRTSLVAAMIETGVGIPSMCLSAHRRFPFGSRDE   87 (286)
Q Consensus        20 ~~~~~~a~~~Gf~~iEl~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~gl~i~~~~~~~~~~~~~~~~d~   87 (286)
                      .+.++.|+++|.|+|-+-....+....+.            .++.++..++.+.+++.|+...+--...           
T Consensus        34 ~~lI~~A~~aGadaVKFQt~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~sTpfd~-----------  102 (358)
T c1vliA_          34 FALIDAAAEAGADAVKFQXFQADRXYQKDPDVSIFSLVQSXEXPAEWILPLLDYCREKQVIFLSTVCDE-----------  102 (358)
T ss_dssp             HHHHHHHHHHTCSEEEECCBCGGGGTSCCCCCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECBCCSH-----------
T ss_pred             HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCH-----------
T ss_conf             999999997199789842014210015655630457775316998999999999997598299834799-----------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHH
Q ss_conf             99999999999999997661898999911558888980899999999999999874213279998513323258989999
Q batch____        88 AVRERAREIMSKAIRLARDLGIRTIQLAGYDVYYEDHDEGTRQRFAEGLAWAVEQAAASQVMLAVEIMDTAFMNSISKWK  167 (286)
Q Consensus        88 ~~r~~~~~~~~~~i~~a~~lg~~~i~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~a~~~gv~i~lE~~~~~~~~~~~~~~  167 (286)
                                 ..+++...+|++.+-+.++.....               .+.+.+.+.|--+.+=+ ........+.++
T Consensus       103 -----------~svd~l~~~~v~~~KIaS~el~n~---------------pLL~~~A~~gkPvilST-Gmatl~Ei~~Av  155 (358)
T c1vliA_         103 -----------GSADLLQSTSPSAFKIASYEINHL---------------PLLKYVARLNRPXIFST-AGAEISDVHEAW  155 (358)
T ss_dssp             -----------HHHHHHHTTCCSCEEECGGGTTCH---------------HHHHHHHTTCSCEEEEC-TTCCHHHHHHHH
T ss_pred             -----------HHHHHHHHCCCCEEEECHHHCCCH---------------HHHHHHHHCCCCEEEEC-CCCCHHHHHHHH
T ss_conf             -----------999999863998699841227988---------------99999963189718513-546889999999


Q ss_pred             HHHHHHHHCCCCCCCCCCC
Q ss_conf             9999740023231533100
Q batch____       168 KWDEMLASPWFTVYPDVGN  186 (286)
Q Consensus       168 ~ll~~~~~~~~~~~~d~~h  186 (286)
                      +.+...+...+.+..++..
T Consensus       156 ~~i~~~g~~~i~llhC~s~  174 (358)
T c1vliA_         156 RTIRAEGNNQIAIXHCVAK  174 (358)
T ss_dssp             HHHHTTTCCCEEEEEECSS
T ss_pred             HHHHHCCCCCEEEEECCCC
T ss_conf             9999679984899955888