27 d1jnra1 Probab=99.98   E-value=1e-31  Score=219.97  Aligned_columns=132  Identities=24%

Q ss_pred             HHCCCCCCCCCHHHHHHHHHHHHHHCCCEEE-----CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             4212565678989999999999973187379-----67899999999999999977410233323358688999999999
Q batch____       445 NRWNNNRNGEDPVAIRKALQECMQHNFSVFR-----EGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNL  519 (588)
Q Consensus       445 ~~~~~~~~~~~~~~~~~~l~~~m~~~~~~~r-----~~~~l~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~  519 (588)
                      ++|+.+.++++|.+++++||++|++|||++|     |+++|+.|+++|++|+++++.+.+.+.+     ++++++|++||
T Consensus         1 ~~~~~~~~~i~P~e~~~~Lq~~M~~yaGi~R~~~r~~e~gL~~al~~L~~l~e~~~~~~~~d~~-----el~~~~El~nl   75 (141)
T d1jnra1           1 TADDVNPEYILPWQGLVRLQKIMDEYAAGIATIYKTNEKMLQRALELLAFLKEDLEKLAARDLH-----ELMRAWELVHR   75 (141)
T ss_dssp             CCTTCCTTCBCHHHHHHHHHHHHHHHTTCGGGTTEECHHHHHHHHHHHHHHHHHHTTBCCSSHH-----HHHHHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH-----HHHHHHHHHHH
T ss_conf             9877787775889999999999972074573233468899999999999999876511048888-----99999979999


Q ss_pred             HHHHHHHHHHHHCCCCCC--CCEECCCCCCCCCHHHHEEEEEEE--CCCCEEEEECCCCCCCCCCC
Q ss_conf             999999999997485550--234337787667244621489874--38961112203422103554
Q batch____       520 METAYATAVSANFRTESR--GAHSRFDFPDRDDENWLCHSLYLP--ESESMTRRSVNMEPKLRPAF  581 (588)
Q Consensus       520 l~~a~~~~~aal~R~ESR--G~h~R~DyP~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  581 (588)
                      |++|+++++|||+|+|||  |+|||+|||++||+||+|++++++  ++|+++...+.++.+..+.+
T Consensus        76 L~va~~iv~aAL~R~ESR~~G~H~R~DyPe~dde~w~~~i~~~~~~e~g~~~~~~~p~~~~~~~~~  141 (141)
T d1jnra1          76 VWTAEAHVRHMLFRKETRWPGYYYRTDYPELNDEEWKCFVCSKYDAEKDEWTFEKVPYVQVIEWSF  141 (141)
T ss_dssp             HHHHHHHHHHHHHCCSCSSTTTCEETTSCSCCTTTCCEEEEEEEETTTTEEEEEEEECCCCSCCCC
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHCEEEEEEEECCCCCEEEEEEEEHHHHHHCCC
T ss_conf             999999999998332127788501489887684340046888983899828999941577200259