30 c3nlcA_ Probab=99.94   E-value=1.6e-26  Score=186.84  Aligned_columns=371  Identities=18%

Q ss_pred             EEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCC-CCCHHHHHHHHHHHCCCCCCHHHH
Q ss_conf             1118999791899999999998898099998898787055630564002377765-479899999999850788888999
Q batch____         7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTH-EDNWEWHMYDTVKGSDYIGDQDAI   85 (588)
Q Consensus         7 ~~DViVVG~G~aGl~aA~~aa~~G~~V~viEK~~~~gg~s~~a~Gg~~~~~~~~~-~d~~e~~~~d~~~~~~~~~~~~lv   85 (588)
                      +.+|||||+|+|||+||+.|+++|++|+|+||++..||.+....++......... ..........+...+.........
T Consensus        93 ~~~~vVVGaG~AGL~AA~~La~~G~~V~vlE~~~~~GGr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (534)
T c3nlcA_          93 TERPIVIGFGPCGLFAGLVLAQXGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP  172 (534)
T ss_dssp             CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHCHHCCCCCEEEEHHHH
T ss_conf             88679988968999999999976981999978887564300024555642014334443101100000257501100010


Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCE
Q ss_conf             99998458999999986980353477620012233331235654447310357678789999999999967985870554
Q batch____        86 EYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWY  165 (588)
Q Consensus        86 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~g~~~~~~L~~~~~~~gv~i~~~~~  165 (588)
                      ....   .+.++|+.+.|+++.....                     ...+............+.+.+...++++++++.
T Consensus       173 ~~~~---~~~~~~~~~~g~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~  228 (534)
T c3nlcA_         173 NFYG---RKVITEFVEAGAPEEILYV---------------------SKPHIGTFKLVTXIEKXRATIIELGGEIRFSTR  228 (534)
T ss_dssp             TCHH---HHHHHHHHHTTCCGGGGTB---------------------SSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCC
T ss_pred             CCCH---HHHHHHHHHCCCCCCCCCC---------------------CCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCE
T ss_conf             1567---8999999976998300247---------------------852313222036899999999868979995878


Q ss_pred             EEEEEEECCCEEEEEEEECCCCCCEEEEECCCEEEECCCCCCCC------------------CCCCCCCCCCHHHHHHHH
Q ss_conf             56445307805899998205688489995261587418854466------------------676889888589999999
Q batch____       166 ALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIY------------------QSTTNAHINTGDGVGMAI  227 (588)
Q Consensus       166 ~~~ll~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVLAtGG~~~~~------------------~~~~~~~~~tGdG~~ma~  227 (588)
                      +..++.+ ++.+.++...+..     .+.|++||+|||+++++.                  ......+...++.+....
T Consensus       229 v~~~~~~-~~~~~~~~~~~~~-----~i~A~aVIlAtGg~a~~~~~~l~~~g~~~~~~~~a~g~~~~~~~~~~~~~~~~~  302 (534)
T c3nlcA_         229 VDDLHXE-DGQITGVTLSNGE-----EIKSRHVVLAVGHSARDTFEXLHERGVYXEAKPFSVGFRIEHKQSXIDEARFGP  302 (534)
T ss_dssp             EEEEEES-SSBEEEEEETTSC-----EEECSCEEECCCTTCHHHHHHHHHTTCCCEECCEEEEEEEEEEHHHHHHHHTST
T ss_pred             EEECCCC-CCEEEEEEECCCE-----EEECCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHCCCC
T ss_conf             6101036-6402546732760-----897787998288532467878887498655654310012034310001101233


Q ss_pred             HCCCEEECCCEEEEEEEEECCCCCCCCHHHCCCCEEEECCCCCCCCCC-----------------CCCHHHHCCCCCHHH
Q ss_conf             808917765602577665437886021454357618983997342000-----------------251022016620578
Q batch____       228 RAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMER-----------------YAPNAKDLAGRDVVA  290 (588)
Q Consensus       228 ~aGa~l~~me~~~~~p~~~~~~~~l~~~~~~~~g~~lvn~~G~rf~~~-----------------~~~~~~~l~~rd~~~  290 (588)
                      ..+.........+.......+..........+.-..........+...                 ...........+...
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (534)
T c3nlcA_         303 NAGHPILGAADYKLVHHCKNGRTVYSFCXCPGGTVVAATSEEGRVVTNGXSQYSRAERNANSAIVVGISPEVDYPGDPLA  382 (534)
T ss_dssp             TTTCTTTCSCCCCCEEECTTSCEEEEEEEEEEEEEEECCCSTTCCCEEEECCTTCCSSEEEEEEEEEECBTTTBCCSTTH
T ss_pred             CCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
T ss_conf             34543344432101102467870046521676512320145653100332111112223344136630367433531001


Q ss_pred             HHHHHHHHH------------------------------CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             999999996------------------------------79877656755554331899999999999999999833889
Q batch____       291 RSIMIEIRE------------------------------GRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHV  340 (588)
Q Consensus       291 ~~i~~e~~~------------------------------g~~~~~~~~~~~~~d~~~~~~e~l~~~~~~~~~~~~~~~~~  340 (588)
                      ...+.....                              ..............+++...++.....+.........    
T Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~----  458 (534)
T c3nlcA_         383 GIRFQRELESNAYKLGGENYDAPAQKIGDFLKGRDPSQLGDVEPSFTPGIKLTDLSKALPPFAVEAIREAIPAFDR----  458 (534)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSCEEEEEHHHHHHTCTTCCCCSSCCCCSSCEEECCGGGTSCHHHHHHHHHHHHHHHT----
T ss_pred             CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCC----
T ss_conf             6310146666776416777541898998873555200222110355857223444455689999999873442122----


Q ss_pred             CCCCCCEEEEEECCEEECCEEECCCCEEEEECCCC-CCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             87766268731010543618874985066506874-21317883136555047667887323147899999999999999
Q batch____       341 DPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKG-EDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHL  419 (588)
Q Consensus       341 d~~~~~~~v~p~~~~t~GGi~vd~~~~v~~~~~~~-~~t~IpGLyAaGe~ag~~~~G~~rl~g~sl~~~~v~G~~Ag~~a  419 (588)
                           .++-.+..++++||+.++..+.+....+.. ++|+|||||+|||.++.         +.++.+|++.|++|++.+
T Consensus       459 -----~~p~~~~~~~~~gGv~~~~~~~~~~~~~~~~~~t~I~GLY~aGe~ag~---------~gGi~~Aa~sG~~aA~~i  524 (534)
T c3nlcA_         459 -----KIKGFASEDGLLTGVETRTSSPVCIKRGKDFQSVNLKGFYPAGEGAGY---------AGGILSAGIDGIKVAEAV  524 (534)
T ss_dssp             -----TSTTTTCTTCEEEEEECCSSCSEECCCTTTTSCTTCBTEEECHHHHTS---------CCSHHHHHHHHHHHHHHH
T ss_pred             -----CCCCCCCCCEEEEEEEEECCCCCEEECCCCCCCCCCCCEEEECCCCCC---------CCHHHHHHHHHHHHHHHH
T ss_conf             -----124445674675357861357613410776315228975991313787---------203799999999999999


Q ss_pred             HHHHHH
Q ss_conf             998750
Q batch____       420 QESIAE  425 (588)
Q Consensus       420 a~~~~~  425 (588)
                      ++++.+
T Consensus       525 ~~~l~~  530 (534)
T c3nlcA_         525 ARDIVA  530 (534)
T ss_dssp             HHHHHH
T ss_pred             HHHHHC
T ss_conf             998732