110 c1ltxR_ Probab=99.54   E-value=1.2e-12  Score=98.02  Aligned_columns=201  Identities=12%

Q ss_pred             EEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHH----------------------------------------
Q ss_conf             1118999791899999999998898099998898787055----------------------------------------
Q batch____         7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHT----------------------------------------   46 (588)
Q Consensus         7 ~~DViVVG~G~aGl~aA~~aa~~G~~V~viEK~~~~gg~s----------------------------------------   46 (588)
                      +|||+|||+|+|||+||+.|+++|.+|+|+|+.+..||.+                                        
T Consensus         7 ~~DVvVIGaG~aGL~aA~~La~~G~~V~vlEa~~~~GG~~~s~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (494)
T c1ltxR_           7 DFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENTENSMWQEQILENEEAIPLSSK   86 (494)
T ss_dssp             BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHHTTTCCCCCCCGGGGSCTTEEEEEBCSS
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             37889998988899999999987980999967889971279985277043214632256542122222344200113322


Q ss_pred             -------------------------HHCCCCCCCCCCCCCCCCHHHHHHHHHHHC-------------------------
Q ss_conf             -------------------------630564002377765479899999999850-------------------------
Q batch____        47 -------------------------VSAQGGITVALGNTHEDNWEWHMYDTVKGS-------------------------   76 (588)
Q Consensus        47 -------------------------~~a~Gg~~~~~~~~~~d~~e~~~~d~~~~~-------------------------   76 (588)
                                               .-..........+..-.........+...+                         
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  166 (494)
T c1ltxR_          87 DKTIQHVEVFCYASQDKNRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVP  166 (494)
T ss_dssp             CCCEEEEEEEECSTTCCCCCCHHHHHHTGGGCCEESSCCCEETTSHHHHHHHHHTGGGGCCEEEEEEEEEEETTEEEECC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHCC
T ss_conf             33333233111146555431222321101002333121344401488897644285655655644421020014021145


Q ss_pred             ----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC
Q ss_conf             ----------------------------------------7888889999999845899999998698035347762001
Q batch____        77 ----------------------------------------DYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQ  116 (588)
Q Consensus        77 ----------------------------------------~~~~~~~lv~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~  116 (588)
                                                              ....-.+++..+  ...+.+..+....+............
T Consensus       167 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (494)
T c1ltxR_         167 CSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQ--KLTPNLQYFVLHSIAMTSTSCTVDGL  244 (494)
T ss_dssp             CSHHHHHHCSSSCHHHHHHHHHHHHHHTTGGGCGGGTGGGTTSBHHHHHHHS--SCCHHHHHHHHTTTSCCCCCBHHHHH
T ss_pred             CCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHH--CCCHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf             8967872165643034443456777752356675886432159688999883--89999999999999751478824799


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEE-CCCEEEEEEEECCCCCCEEEEEC
Q ss_conf             22333312356544473103576787899999999999679858705545644530-78058999982056884899952
Q batch____       117 RPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKN-QDGAVVGCTALCIETGEVVYFKA  195 (588)
Q Consensus       117 ~~~~~~~~~~~~~~~~r~~~~~~~~g~~~~~~L~~~~~~~gv~i~~~~~~~~ll~~-~~g~v~Gv~~~~~~~g~~~~i~A  195 (588)
                      ..+..+.............+.....+. +...|.+.+...|+++..++++..+..+ ++++++|+...+.+     ++.|
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~gG~~~-l~~~l~~~l~~~Gg~i~l~~~V~~I~~~~~~~~~~~v~~~~g~-----~~~a  318 (494)
T c1ltxR_         245 KATKKFLQCLGRYGNTPFLFPLYGQGE-LPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQ-----RIIS  318 (494)
T ss_dssp             HHHHHHHTTTTSSSSSSEEEETTCTTH-HHHHHHHHHHHTTCEEETTCCEEEEEEETTTCCEEEEEETTCC-----EEEC
T ss_pred             HHHHHHHHHHHHCCCCCEEEECCCHHH-HHHHHHHHHHHCCCEEEEECCEEEEEECCCCCEEEEEEECCCC-----EEEE
T ss_conf             999999999653066855886488789-9999999974048708830422699983889769999937983-----9990


Q ss_pred             CCEEEECCCCCCCCCCCCCC
Q ss_conf             61587418854466676889
Q batch____       196 RATVLATGGAGRIYQSTTNA  215 (588)
Q Consensus       196 ~~VVLAtGG~~~~~~~~~~~  215 (588)
                      +.||+++.............
T Consensus       319 ~~VI~a~~~~~~~~~~~~~~  338 (494)
T c1ltxR_         319 KHFIIEDSYLSENTCSRVQY  338 (494)
T ss_dssp             SEEEEEGGGBCTTTTSSCCC
T ss_pred             CEEEECCCCCCHHHHCCCCC
T ss_conf             78998684036364313555