BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (88 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7ZKT2 Regulatory protein ariR n=38 Tax=Enterobacteriac...   174   1e-42
UniRef50_C4X5Q6 Putative uncharacterized protein n=6 Tax=Enterob...    86   3e-16
UniRef50_C9Y5B8 Regulatory protein ariR n=4 Tax=Enterobacteriace...    85   7e-16
UniRef50_UPI00018264FC hypothetical protein EcanA3_04822 n=1 Tax...    84   2e-15
UniRef50_C8Q642 Putative uncharacterized protein n=4 Tax=Pantoea...    65   1e-09
UniRef50_C8Q8K5 Putative uncharacterized protein n=2 Tax=Pantoea...    49   4e-05
UniRef50_B2VIE0 Putative uncharacterized protein n=1 Tax=Erwinia...    48   8e-05
UniRef50_A9MFJ8 Putative uncharacterized protein n=29 Tax=Salmon...    47   2e-04
UniRef50_C8Q652 Putative uncharacterized protein n=1 Tax=Pantoea...    45   6e-04
UniRef50_C6DKW6 Putative uncharacterized protein n=5 Tax=Pectoba...    41   0.015
UniRef50_C8QER2 Putative uncharacterized protein n=1 Tax=Pantoea...    40   0.027

>UniRef50_A7ZKT2 Regulatory protein ariR n=38 Tax=Enterobacteriaceae
          RepID=ARIR_ECO24
          Length = 88

 Score =  174 bits (440), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 88/88 (100%), Positives = 88/88 (100%)

Query: 1  MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS 60
          MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS
Sbjct: 1  MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS 60

Query: 61 LETTSDILKADVIRKTLEIVLRYTADDM 88
          LETTSDILKADVIRKTLEIVLRYTADDM
Sbjct: 61 LETTSDILKADVIRKTLEIVLRYTADDM 88


>UniRef50_C4X5Q6 Putative uncharacterized protein n=6 Tax=Enterobacteriaceae
          RepID=C4X5Q6_KLEPN
          Length = 88

 Score = 86.3 bits (212), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/88 (50%), Positives = 64/88 (72%)

Query: 1  MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS 60
          M +   I+  + D AL+ YFR++G+ L +ESAV+  A+ +++ S  ++NNK IIL LI +
Sbjct: 1  MHQQPDIYARLQDTALSDYFRNAGDKLVDESAVMSLAINSILQSEGHLNNKAIILWLIQA 60

Query: 61 LETTSDILKADVIRKTLEIVLRYTADDM 88
          LETT D++ ADVIRKTLEIV+ YT DD+
Sbjct: 61 LETTDDVVTADVIRKTLEIVVGYTMDDI 88


>UniRef50_C9Y5B8 Regulatory protein ariR n=4 Tax=Enterobacteriaceae
          RepID=C9Y5B8_CROTZ
          Length = 92

 Score = 85.1 bits (209), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 64/88 (72%)

Query: 1  MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS 60
          ML  T +   + D AL+ YFR++G++L +E+A+LG  V+N++ +  ++ +K IIL LI  
Sbjct: 5  MLNPTDLQADLPDTALSEYFRNAGDMLAQEAALLGAVVSNILATDGHLTHKAIILQLIGV 64

Query: 61 LETTSDILKADVIRKTLEIVLRYTADDM 88
          LETT D++ ADVIRKTLEIV+ +T DD+
Sbjct: 65 LETTDDVVMADVIRKTLEIVVDHTLDDI 92


>UniRef50_UPI00018264FC hypothetical protein EcanA3_04822 n=1 Tax=Enterobacter
          cancerogenus ATCC 35316 RepID=UPI00018264FC
          Length = 92

 Score = 83.6 bits (205), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/79 (50%), Positives = 57/79 (72%)

Query: 10 AITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILK 69
          A+ DK LA +F ++G+ L +E+ VLG A+  +ML GDN++NK IIL L+H+LE T +   
Sbjct: 14 ALHDKGLAEHFLNAGSHLSDEAEVLGSAIRCIMLCGDNLSNKEIILQLVHALEITKEPEA 73

Query: 70 ADVIRKTLEIVLRYTADDM 88
           DVIR TLEIV+ +T DD+
Sbjct: 74 CDVIRNTLEIVVGFTRDDI 92


>UniRef50_C8Q642 Putative uncharacterized protein n=4 Tax=Pantoea sp. At-9b
           RepID=C8Q642_9ENTR
          Length = 120

 Score = 64.7 bits (156), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 47/69 (68%)

Query: 19  YFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLE 78
           +FRS G+ L  E+AVL   + ++++ G  V +K IIL LI  LE+TSD+++ DV+R  LE
Sbjct: 49  HFRSGGDALAAETAVLDAVIRDIVIHGKKVTSKAIILYLIAELESTSDVVELDVLRSALE 108

Query: 79  IVLRYTADD 87
           IV+  T DD
Sbjct: 109 IVVGKTPDD 117


>UniRef50_C8Q8K5 Putative uncharacterized protein n=2 Tax=Pantoea sp. At-9b
          RepID=C8Q8K5_9ENTR
          Length = 85

 Score = 48.9 bits (115), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 43/72 (59%)

Query: 16 LASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRK 75
          L+ Y +S  +    E AVL +   +L      V NK+II SL+  LE+ +D++K DV R+
Sbjct: 11 LSVYLKSMDSQFVSEKAVLVEIYQDLSSRKAVVGNKDIIHSLLEKLESENDVIKLDVYRQ 70

Query: 76 TLEIVLRYTADD 87
           LE+V++ T DD
Sbjct: 71 ALEMVVQLTPDD 82


>UniRef50_B2VIE0 Putative uncharacterized protein n=1 Tax=Erwinia tasmaniensis
           RepID=B2VIE0_ERWT9
          Length = 147

 Score = 48.1 bits (113), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 35/59 (59%)

Query: 29  EESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLRYTADD 87
           +E+  LG  +  L   G  + NK +IL LI  LE TSD+++ DV R  LE+++  T DD
Sbjct: 88  QEAQALGNIIGELNAEGRYITNKALILKLIEKLEMTSDVIELDVYRHVLEVIIGNTPDD 146


>UniRef50_A9MFJ8 Putative uncharacterized protein n=29 Tax=Salmonella enterica
          RepID=A9MFJ8_SALAR
          Length = 82

 Score = 47.0 bits (110), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 3/67 (4%)

Query: 23 SGNLLEEESAVLGQAVT-NLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVL 81
          S ++L E+ A+  Q +T  L+ S  +V+NK+II  LI  LET  D+++ D+ R  LE VL
Sbjct: 18 SAHMLCEQRAI--QEITYELLQSQQHVSNKDIIAKLIEKLETEKDVVQLDIYRNALEAVL 75

Query: 82 RYTADDM 88
            T DD+
Sbjct: 76 FQTPDDI 82


>UniRef50_C8Q652 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b
          RepID=C8Q652_9ENTR
          Length = 87

 Score = 45.4 bits (106), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 2/79 (2%)

Query: 9  NAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDIL 68
          N++T  A+ +  +S G+ L  E   L  A+  ++ SG  + NK +I+ +I  LE   ++ 
Sbjct: 5  NSVT--AIRARLQSCGDTLAAERQELEAAIQMILASGGQLTNKTLIIHVIRELEHERNVQ 62

Query: 69 KADVIRKTLEIVLRYTADD 87
          +  V+R  LE+++ +T DD
Sbjct: 63 RQGVLRNVLELIVTHTPDD 81


>UniRef50_C6DKW6 Putative uncharacterized protein n=5 Tax=Pectobacterium
          RepID=C6DKW6_PECCP
          Length = 84

 Score = 40.8 bits (94), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 33/56 (58%)

Query: 33 VLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLRYTADDM 88
          +LG  V  ++ SG +V+NK II  LIH +ET ++    +  R  LE+++  T DD 
Sbjct: 27 ILGNIVEEIIQSGHSVSNKAIIAKLIHKIETEANAAFQEKYRALLELIVYKTQDDF 82


>UniRef50_C8QER2 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b
          RepID=C8QER2_9ENTR
          Length = 80

 Score = 39.7 bits (91), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 31 SAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLRYTADDM 88
          + V  Q +  ++ +G  V NK II  LI  LE  +D+ + D+ R+ LE V+  T DD+
Sbjct: 21 AEVFAQVIGEILQTGMPVTNKAIISVLISRLELENDVTQLDIYRQLLEKVVNKTPDDL 78


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_C4X5Q6 Putative uncharacterized protein n=6 Tax=Enterob...   108   6e-23
UniRef50_A7ZKT2 Regulatory protein ariR n=38 Tax=Enterobacteriac...   102   3e-21
UniRef50_C9Y5B8 Regulatory protein ariR n=4 Tax=Enterobacteriace...   102   4e-21
UniRef50_UPI00018264FC hypothetical protein EcanA3_04822 n=1 Tax...   100   2e-20
UniRef50_C8Q642 Putative uncharacterized protein n=4 Tax=Pantoea...    93   2e-18
UniRef50_C8Q652 Putative uncharacterized protein n=1 Tax=Pantoea...    86   3e-16
UniRef50_B2VIE0 Putative uncharacterized protein n=1 Tax=Erwinia...    84   2e-15
UniRef50_C8Q8K5 Putative uncharacterized protein n=2 Tax=Pantoea...    77   2e-13
UniRef50_A9MFJ8 Putative uncharacterized protein n=29 Tax=Salmon...    70   3e-11

Sequences not found previously or not previously below threshold:

UniRef50_C8QER2 Putative uncharacterized protein n=1 Tax=Pantoea...    58   7e-08
UniRef50_P0A243 Uncharacterized 9.1 kDa protein in spaS 3'region...    52   8e-06
UniRef50_C6DKW6 Putative uncharacterized protein n=5 Tax=Pectoba...    51   1e-05
UniRef50_C8Q3J7 Putative uncharacterized protein n=1 Tax=Pantoea...    46   3e-04

>UniRef50_C4X5Q6 Putative uncharacterized protein n=6 Tax=Enterobacteriaceae
          RepID=C4X5Q6_KLEPN
          Length = 88

 Score =  108 bits (269), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 44/88 (50%), Positives = 64/88 (72%)

Query: 1  MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS 60
          M +   I+  + D AL+ YFR++G+ L +ESAV+  A+ +++ S  ++NNK IIL LI +
Sbjct: 1  MHQQPDIYARLQDTALSDYFRNAGDKLVDESAVMSLAINSILQSEGHLNNKAIILWLIQA 60

Query: 61 LETTSDILKADVIRKTLEIVLRYTADDM 88
          LETT D++ ADVIRKTLEIV+ YT DD+
Sbjct: 61 LETTDDVVTADVIRKTLEIVVGYTMDDI 88


>UniRef50_A7ZKT2 Regulatory protein ariR n=38 Tax=Enterobacteriaceae
          RepID=ARIR_ECO24
          Length = 88

 Score =  102 bits (255), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 88/88 (100%), Positives = 88/88 (100%)

Query: 1  MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS 60
          MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS
Sbjct: 1  MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS 60

Query: 61 LETTSDILKADVIRKTLEIVLRYTADDM 88
          LETTSDILKADVIRKTLEIVLRYTADDM
Sbjct: 61 LETTSDILKADVIRKTLEIVLRYTADDM 88


>UniRef50_C9Y5B8 Regulatory protein ariR n=4 Tax=Enterobacteriaceae
          RepID=C9Y5B8_CROTZ
          Length = 92

 Score =  102 bits (254), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 42/88 (47%), Positives = 64/88 (72%)

Query: 1  MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS 60
          ML  T +   + D AL+ YFR++G++L +E+A+LG  V+N++ +  ++ +K IIL LI  
Sbjct: 5  MLNPTDLQADLPDTALSEYFRNAGDMLAQEAALLGAVVSNILATDGHLTHKAIILQLIGV 64

Query: 61 LETTSDILKADVIRKTLEIVLRYTADDM 88
          LETT D++ ADVIRKTLEIV+ +T DD+
Sbjct: 65 LETTDDVVMADVIRKTLEIVVDHTLDDI 92


>UniRef50_UPI00018264FC hypothetical protein EcanA3_04822 n=1 Tax=Enterobacter
          cancerogenus ATCC 35316 RepID=UPI00018264FC
          Length = 92

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/88 (45%), Positives = 60/88 (68%)

Query: 1  MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS 60
          +++      A+ DK LA +F ++G+ L +E+ VLG A+  +ML GDN++NK IIL L+H+
Sbjct: 5  IIQQAYNFEALHDKGLAEHFLNAGSHLSDEAEVLGSAIRCIMLCGDNLSNKEIILQLVHA 64

Query: 61 LETTSDILKADVIRKTLEIVLRYTADDM 88
          LE T +    DVIR TLEIV+ +T DD+
Sbjct: 65 LEITKEPEACDVIRNTLEIVVGFTRDDI 92


>UniRef50_C8Q642 Putative uncharacterized protein n=4 Tax=Pantoea sp. At-9b
           RepID=C8Q642_9ENTR
          Length = 120

 Score = 93.1 bits (230), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 5/85 (5%)

Query: 3   EDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLE 62
           + TTI   I       +FRS G+ L  E+AVL   + ++++ G  V +K IIL LI  LE
Sbjct: 38  QHTTIEADII-----QHFRSGGDALAAETAVLDAVIRDIVIHGKKVTSKAIILYLIAELE 92

Query: 63  TTSDILKADVIRKTLEIVLRYTADD 87
           +TSD+++ DV+R  LEIV+  T DD
Sbjct: 93  STSDVVELDVLRSALEIVVGKTPDD 117


>UniRef50_C8Q652 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b
          RepID=C8Q652_9ENTR
          Length = 87

 Score = 86.2 bits (212), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 41/74 (55%)

Query: 14 KALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVI 73
           A+ +  +S G+ L  E   L  A+  ++ SG  + NK +I+ +I  LE   ++ +  V+
Sbjct: 8  TAIRARLQSCGDTLAAERQELEAAIQMILASGGQLTNKTLIIHVIRELEHERNVQRQGVL 67

Query: 74 RKTLEIVLRYTADD 87
          R  LE+++ +T DD
Sbjct: 68 RNVLELIVTHTPDD 81


>UniRef50_B2VIE0 Putative uncharacterized protein n=1 Tax=Erwinia tasmaniensis
           RepID=B2VIE0_ERWT9
          Length = 147

 Score = 83.5 bits (205), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 42/82 (51%)

Query: 6   TIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTS 65
           T+     + ++ +   S      +E+  LG  +  L   G  + NK +IL LI  LE TS
Sbjct: 65  TMQQMSQESSVFALLPSGIETSSQEAQALGNIIGELNAEGRYITNKALILKLIEKLEMTS 124

Query: 66  DILKADVIRKTLEIVLRYTADD 87
           D+++ DV R  LE+++  T DD
Sbjct: 125 DVIELDVYRHVLEVIIGNTPDD 146


>UniRef50_C8Q8K5 Putative uncharacterized protein n=2 Tax=Pantoea sp. At-9b
          RepID=C8Q8K5_9ENTR
          Length = 85

 Score = 77.0 bits (188), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/75 (37%), Positives = 44/75 (58%)

Query: 13 DKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADV 72
          +  L+ Y +S  +    E AVL +   +L      V NK+II SL+  LE+ +D++K DV
Sbjct: 8  ESQLSVYLKSMDSQFVSEKAVLVEIYQDLSSRKAVVGNKDIIHSLLEKLESENDVIKLDV 67

Query: 73 IRKTLEIVLRYTADD 87
           R+ LE+V++ T DD
Sbjct: 68 YRQALEMVVQLTPDD 82


>UniRef50_A9MFJ8 Putative uncharacterized protein n=29 Tax=Salmonella enterica
          RepID=A9MFJ8_SALAR
          Length = 82

 Score = 69.7 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 23 SGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLR 82
          S ++L E+ A+  +    L+ S  +V+NK+II  LI  LET  D+++ D+ R  LE VL 
Sbjct: 18 SAHMLCEQRAI-QEITYELLQSQQHVSNKDIIAKLIEKLETEKDVVQLDIYRNALEAVLF 76

Query: 83 YTADDM 88
           T DD+
Sbjct: 77 QTPDDI 82


>UniRef50_C8QER2 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b
          RepID=C8QER2_9ENTR
          Length = 80

 Score = 58.1 bits (139), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 31 SAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLRYTADDM 88
          + V  Q +  ++ +G  V NK II  LI  LE  +D+ + D+ R+ LE V+  T DD+
Sbjct: 21 AEVFAQVIGEILQTGMPVTNKAIISVLISRLELENDVTQLDIYRQLLEKVVNKTPDDL 78


>UniRef50_P0A243 Uncharacterized 9.1 kDa protein in spaS 3'region n=6 Tax=Shigella
          RepID=YSPT_SHIFL
          Length = 80

 Score = 51.5 bits (122), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 36/64 (56%)

Query: 25 NLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLRYT 84
          +  E ES+++      ++     ++NK+II  L+  + +  D+++ D+ R  LE+V+  T
Sbjct: 17 SEFEIESSIINSIANEVLNPISFLSNKDIINVLLRKISSECDLVRKDIYRCALELVVEKT 76

Query: 85 ADDM 88
           DD+
Sbjct: 77 PDDL 80


>UniRef50_C6DKW6 Putative uncharacterized protein n=5 Tax=Pectobacterium
          RepID=C6DKW6_PECCP
          Length = 84

 Score = 51.2 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 40/81 (49%)

Query: 7  IHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSD 66
          +H+ +    L        +    +  +LG  V  ++ SG +V+NK II  LIH +ET ++
Sbjct: 1  MHSEVPPNELPISDTLGLDSQVNDMEILGNIVEEIIQSGHSVSNKAIIAKLIHKIETEAN 60

Query: 67 ILKADVIRKTLEIVLRYTADD 87
              +  R  LE+++  T DD
Sbjct: 61 AAFQEKYRALLELIVYKTQDD 81


>UniRef50_C8Q3J7 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b
          RepID=C8Q3J7_9ENTR
          Length = 83

 Score = 46.2 bits (108), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 28/71 (39%)

Query: 7  IHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSD 66
          +H     +A+  YF S       E  +L   +  LM +G    +K +I  +I  LE   D
Sbjct: 3  VHPNSASRAITDYFNSPAWHAPHEGDLLAAIMRELMDAGQPATSKAVIARVIAKLEFEGD 62

Query: 67 ILKADVIRKTL 77
            +    R  L
Sbjct: 63 EQRLQSYRNLL 73


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_C4X5Q6 Putative uncharacterized protein n=6 Tax=Enterob...   100   1e-20
UniRef50_UPI00018264FC hypothetical protein EcanA3_04822 n=1 Tax...    99   4e-20
UniRef50_C9Y5B8 Regulatory protein ariR n=4 Tax=Enterobacteriace...    96   3e-19
UniRef50_C8Q642 Putative uncharacterized protein n=4 Tax=Pantoea...    95   5e-19
UniRef50_A7ZKT2 Regulatory protein ariR n=38 Tax=Enterobacteriac...    93   2e-18
UniRef50_B2VIE0 Putative uncharacterized protein n=1 Tax=Erwinia...    93   3e-18
UniRef50_C8Q652 Putative uncharacterized protein n=1 Tax=Pantoea...    82   6e-15
UniRef50_C6DKW6 Putative uncharacterized protein n=5 Tax=Pectoba...    80   2e-14
UniRef50_C8Q3J7 Putative uncharacterized protein n=1 Tax=Pantoea...    80   2e-14
UniRef50_P0A243 Uncharacterized 9.1 kDa protein in spaS 3'region...    76   4e-13
UniRef50_C8Q8K5 Putative uncharacterized protein n=2 Tax=Pantoea...    75   7e-13
UniRef50_C8QER2 Putative uncharacterized protein n=1 Tax=Pantoea...    71   1e-11
UniRef50_A9MFJ8 Putative uncharacterized protein n=29 Tax=Salmon...    69   3e-11

Sequences not found previously or not previously below threshold:


CONVERGED!
>UniRef50_C4X5Q6 Putative uncharacterized protein n=6 Tax=Enterobacteriaceae
          RepID=C4X5Q6_KLEPN
          Length = 88

 Score =  100 bits (249), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/88 (50%), Positives = 64/88 (72%)

Query: 1  MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS 60
          M +   I+  + D AL+ YFR++G+ L +ESAV+  A+ +++ S  ++NNK IIL LI +
Sbjct: 1  MHQQPDIYARLQDTALSDYFRNAGDKLVDESAVMSLAINSILQSEGHLNNKAIILWLIQA 60

Query: 61 LETTSDILKADVIRKTLEIVLRYTADDM 88
          LETT D++ ADVIRKTLEIV+ YT DD+
Sbjct: 61 LETTDDVVTADVIRKTLEIVVGYTMDDI 88


>UniRef50_UPI00018264FC hypothetical protein EcanA3_04822 n=1 Tax=Enterobacter
          cancerogenus ATCC 35316 RepID=UPI00018264FC
          Length = 92

 Score = 98.9 bits (245), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/88 (45%), Positives = 60/88 (68%)

Query: 1  MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS 60
          +++      A+ DK LA +F ++G+ L +E+ VLG A+  +ML GDN++NK IIL L+H+
Sbjct: 5  IIQQAYNFEALHDKGLAEHFLNAGSHLSDEAEVLGSAIRCIMLCGDNLSNKEIILQLVHA 64

Query: 61 LETTSDILKADVIRKTLEIVLRYTADDM 88
          LE T +    DVIR TLEIV+ +T DD+
Sbjct: 65 LEITKEPEACDVIRNTLEIVVGFTRDDI 92


>UniRef50_C9Y5B8 Regulatory protein ariR n=4 Tax=Enterobacteriaceae
          RepID=C9Y5B8_CROTZ
          Length = 92

 Score = 95.8 bits (237), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/88 (47%), Positives = 64/88 (72%)

Query: 1  MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS 60
          ML  T +   + D AL+ YFR++G++L +E+A+LG  V+N++ +  ++ +K IIL LI  
Sbjct: 5  MLNPTDLQADLPDTALSEYFRNAGDMLAQEAALLGAVVSNILATDGHLTHKAIILQLIGV 64

Query: 61 LETTSDILKADVIRKTLEIVLRYTADDM 88
          LETT D++ ADVIRKTLEIV+ +T DD+
Sbjct: 65 LETTDDVVMADVIRKTLEIVVDHTLDDI 92


>UniRef50_C8Q642 Putative uncharacterized protein n=4 Tax=Pantoea sp. At-9b
           RepID=C8Q642_9ENTR
          Length = 120

 Score = 95.5 bits (236), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 5/85 (5%)

Query: 3   EDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLE 62
           + TTI   I       +FRS G+ L  E+AVL   + ++++ G  V +K IIL LI  LE
Sbjct: 38  QHTTIEADII-----QHFRSGGDALAAETAVLDAVIRDIVIHGKKVTSKAIILYLIAELE 92

Query: 63  TTSDILKADVIRKTLEIVLRYTADD 87
           +TSD+++ DV+R  LEIV+  T DD
Sbjct: 93  STSDVVELDVLRSALEIVVGKTPDD 117


>UniRef50_A7ZKT2 Regulatory protein ariR n=38 Tax=Enterobacteriaceae
          RepID=ARIR_ECO24
          Length = 88

 Score = 93.2 bits (230), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 88/88 (100%), Positives = 88/88 (100%)

Query: 1  MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS 60
          MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS
Sbjct: 1  MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS 60

Query: 61 LETTSDILKADVIRKTLEIVLRYTADDM 88
          LETTSDILKADVIRKTLEIVLRYTADDM
Sbjct: 61 LETTSDILKADVIRKTLEIVLRYTADDM 88


>UniRef50_B2VIE0 Putative uncharacterized protein n=1 Tax=Erwinia tasmaniensis
           RepID=B2VIE0_ERWT9
          Length = 147

 Score = 92.8 bits (229), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 42/82 (51%)

Query: 6   TIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTS 65
           T+     + ++ +   S      +E+  LG  +  L   G  + NK +IL LI  LE TS
Sbjct: 65  TMQQMSQESSVFALLPSGIETSSQEAQALGNIIGELNAEGRYITNKALILKLIEKLEMTS 124

Query: 66  DILKADVIRKTLEIVLRYTADD 87
           D+++ DV R  LE+++  T DD
Sbjct: 125 DVIELDVYRHVLEVIIGNTPDD 146


>UniRef50_C8Q652 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b
          RepID=C8Q652_9ENTR
          Length = 87

 Score = 82.0 bits (201), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 41/74 (55%)

Query: 14 KALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVI 73
           A+ +  +S G+ L  E   L  A+  ++ SG  + NK +I+ +I  LE   ++ +  V+
Sbjct: 8  TAIRARLQSCGDTLAAERQELEAAIQMILASGGQLTNKTLIIHVIRELEHERNVQRQGVL 67

Query: 74 RKTLEIVLRYTADD 87
          R  LE+++ +T DD
Sbjct: 68 RNVLELIVTHTPDD 81


>UniRef50_C6DKW6 Putative uncharacterized protein n=5 Tax=Pectobacterium
          RepID=C6DKW6_PECCP
          Length = 84

 Score = 80.1 bits (196), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 40/81 (49%)

Query: 7  IHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSD 66
          +H+ +    L        +    +  +LG  V  ++ SG +V+NK II  LIH +ET ++
Sbjct: 1  MHSEVPPNELPISDTLGLDSQVNDMEILGNIVEEIIQSGHSVSNKAIIAKLIHKIETEAN 60

Query: 67 ILKADVIRKTLEIVLRYTADD 87
              +  R  LE+++  T DD
Sbjct: 61 AAFQEKYRALLELIVYKTQDD 81


>UniRef50_C8Q3J7 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b
          RepID=C8Q3J7_9ENTR
          Length = 83

 Score = 80.1 bits (196), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 28/71 (39%)

Query: 7  IHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSD 66
          +H     +A+  YF S       E  +L   +  LM +G    +K +I  +I  LE   D
Sbjct: 3  VHPNSASRAITDYFNSPAWHAPHEGDLLAAIMRELMDAGQPATSKAVIARVIAKLEFEGD 62

Query: 67 ILKADVIRKTL 77
            +    R  L
Sbjct: 63 EQRLQSYRNLL 73


>UniRef50_P0A243 Uncharacterized 9.1 kDa protein in spaS 3'region n=6 Tax=Shigella
          RepID=YSPT_SHIFL
          Length = 80

 Score = 75.8 bits (185), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 36/64 (56%)

Query: 25 NLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLRYT 84
          +  E ES+++      ++     ++NK+II  L+  + +  D+++ D+ R  LE+V+  T
Sbjct: 17 SEFEIESSIINSIANEVLNPISFLSNKDIINVLLRKISSECDLVRKDIYRCALELVVEKT 76

Query: 85 ADDM 88
           DD+
Sbjct: 77 PDDL 80


>UniRef50_C8Q8K5 Putative uncharacterized protein n=2 Tax=Pantoea sp. At-9b
          RepID=C8Q8K5_9ENTR
          Length = 85

 Score = 75.0 bits (183), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/75 (37%), Positives = 44/75 (58%)

Query: 13 DKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADV 72
          +  L+ Y +S  +    E AVL +   +L      V NK+II SL+  LE+ +D++K DV
Sbjct: 8  ESQLSVYLKSMDSQFVSEKAVLVEIYQDLSSRKAVVGNKDIIHSLLEKLESENDVIKLDV 67

Query: 73 IRKTLEIVLRYTADD 87
           R+ LE+V++ T DD
Sbjct: 68 YRQALEMVVQLTPDD 82


>UniRef50_C8QER2 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b
          RepID=C8QER2_9ENTR
          Length = 80

 Score = 70.8 bits (172), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 31 SAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLRYTADDM 88
          + V  Q +  ++ +G  V NK II  LI  LE  +D+ + D+ R+ LE V+  T DD+
Sbjct: 21 AEVFAQVIGEILQTGMPVTNKAIISVLISRLELENDVTQLDIYRQLLEKVVNKTPDDL 78


>UniRef50_A9MFJ8 Putative uncharacterized protein n=29 Tax=Salmonella enterica
          RepID=A9MFJ8_SALAR
          Length = 82

 Score = 69.3 bits (168), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 23 SGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLR 82
          S ++L E+ A+  +    L+ S  +V+NK+II  LI  LET  D+++ D+ R  LE VL 
Sbjct: 18 SAHMLCEQRAI-QEITYELLQSQQHVSNKDIIAKLIEKLETEKDVVQLDIYRNALEAVLF 76

Query: 83 YTADDM 88
           T DD+
Sbjct: 77 QTPDDI 82


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.316    0.139    0.336 

Lambda     K      H
   0.267   0.0424    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 396,121,157
Number of Sequences: 3077464
Number of extensions: 10463601
Number of successful extensions: 29691
Number of sequences better than 1.0e-01: 19
Number of HSP's better than  0.1 without gapping: 39
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 29652
Number of HSP's gapped (non-prelim): 44
length of query: 88
length of database: 1,040,396,356
effective HSP length: 58
effective length of query: 30
effective length of database: 861,903,444
effective search space: 25857103320
effective search space used: 25857103320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 87 (38.1 bits)