24 c3polA_ Probab=88.17   E-value=1.5  Score=21.14  Aligned_columns=207  Identities=13%

Q ss_pred             CEEEEEECCCCH--------------HHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCCC
Q ss_conf             938999608977--------------999999999984499829999877449426999996221023010222111246
Q batch____         1 MVYIIIVSHGHE--------------DYIKKLLENLNADDEHYKIIVRDNKDSLLLKQICQHYAGLDYISGGVYGFGHNN   66 (264)
Q Consensus         1 lIsViIptyN~~--------------~~l~~~l~si~~q~~~~eiivvDdgS~D~t~~i~~~~~~~~~~~~~~~~~~~~~   66 (264)
                      |.+||||+--..              +.|..+++.+.+....-+|+||-+.     .++.....................
T Consensus        10 ~~~vIi~A~~~s~Rl~~K~Ll~v~Gkpli~~~i~~l~~~~~~~~iiVv~~~-----~~~~~~~~~~~~~~~~~~~~~~~~   84 (262)
T c3polA_          10 MKHIVIPARFSSSRLPGKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDD-----ERIAEICRAEGVDVVLTSADHPSG   84 (262)
T ss_dssp             CEEEEEECCSCCTTSTTGGGSEETTEEHHHHHHHHHTTCCSCSEEEEEESC-----HHHHHHHHTTTCEEEECCSCCCCH
T ss_pred             CEEEEEECCCCCCCCCCCEEEEECCEEHHHHHHHHHHHCCCCCEEEEECCH-----HHHHHHHHHCCCCEEEECCCCCCC
T ss_conf             759999448778899871144368565799999999848998289997695-----888999975399499964887651


Q ss_pred             CCCCCCCCCHHHHCCCCEEEECCCCCCH-HHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCC----CCCCCCCHHHH
Q ss_conf             4332222100231288588532754201-246799999999748971784237851787632111----11344310101
Q batch____        67 NIAVAYVKEKYRPADDDYILFLNPDIIM-KHDDLLTYIKYVESKRYAFSTLCLFRDEAKSLHDYS----VRKFPVLSDFI  141 (264)
Q Consensus        67 ~~~~~~~~~~~~~a~~~~i~~~d~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  141 (264)
                      ................++++..++|..+ .++.+..+++..........................    ...........
T Consensus        85 ~~~~~~~~~~~~~~~~d~~~~~~~d~p~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  164 (262)
T c3polA_          85 TDRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEALY  164 (262)
T ss_dssp             HHHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTSCEEEECSSSBEEE
T ss_pred             HHHHHHHHHHHCCCCCCEEEEEECCCEEECHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCCCCCEEEEECCCCCEEE
T ss_conf             26899999850046898899982895333599999999999976993575644540487670677712899868995877


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC
Q ss_conf             211013434444433333333354332230210088898618965223344205899999998598099908
Q batch____       142 VSFMLGINKTKIPKESIYSDTVVDWCAGSFMLVRFSDFVRVNGFDQGYFMYCEDIDLCLRLSLAGVRLHYVP  213 (264)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~eD~d~~~r~~~~G~~i~~~~  213 (264)
                      ........................+..+....+....+..............+..+ .+|+...|.++...+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~e~~~~~~-~l~~i~~g~~v~~~~  235 (262)
T c3polA_         165 FSRATIPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMGKLEKLESLE-QLRVLENGHRIAIAV  235 (262)
T ss_dssp             EESSCCSCCSSSSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCCHHHHHHTCT-THHHHHTTCCEEEEE
T ss_pred             EECCCCCCCCCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHH-HHHHHHCCCCEEEEE
T ss_conf             30234422222101232201210121112133229999987604876201344577-899996898069998