BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (526 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P77437 Hydrogenase-4 component F n=52 Tax=Bacteria RepI... 1041 0.0 UniRef50_A1JTZ4 Hydrogenase-4 component F n=19 Tax=Bacteria RepI... 639 0.0 UniRef50_C7MLM5 Formate hydrogenlyase subunit 3/multisubunit Na+... 484 e-135 UniRef50_A4E716 Putative uncharacterized protein n=1 Tax=Collins... 435 e-120 UniRef50_Q0W2B8 Hydrogenase, membrane subunit 1-like protein (Ec... 402 e-110 UniRef50_B8I2P6 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 355 2e-96 UniRef50_C8W239 Hydrogenase 4, membrane subunit n=1 Tax=Desulfot... 342 2e-92 UniRef50_A7ZBL2 Hydrogenase-4 component F n=6 Tax=Epsilonproteob... 336 1e-90 UniRef50_D1B460 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 332 3e-89 UniRef50_Q24ST7 Hydrogenase-4 component F n=3 Tax=Desulfitobacte... 323 1e-86 UniRef50_B4UA28 NADH dehydrogenase (Quinone) n=1 Tax=Hydrogenoba... 319 2e-85 UniRef50_Q13II8 NADH dehydrogenase (Quinone) n=3 Tax=Proteobacte... 310 1e-82 UniRef50_B2V8R3 NADH dehydrogenase (Quinone) n=1 Tax=Sulfurihydr... 308 2e-82 UniRef50_Q21TA5 NADH dehydrogenase (Quinone) n=6 Tax=Bacteria Re... 301 5e-80 UniRef50_D2LH97 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 295 3e-78 UniRef50_Q2WAW3 Formate hydrogenlyase subunit 3/Multisubunit Na+... 293 1e-77 UniRef50_B1ZSF1 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus te... 291 3e-77 UniRef50_A1RWL5 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum... 290 1e-76 UniRef50_B5EKJ6 NADH dehydrogenase (Quinone) n=3 Tax=Acidithioba... 281 3e-74 UniRef50_C6HVM6 Putative hydrogenase-4 subunit (HyfF) n=1 Tax=Le... 272 2e-71 UniRef50_C0QBF6 HyfF n=1 Tax=Desulfobacterium autotrophicum HRM2... 266 1e-69 UniRef50_D2L9G9 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 262 3e-68 UniRef50_A6UVJ7 NADH dehydrogenase (Quinone) n=1 Tax=Methanococc... 258 5e-67 UniRef50_A5FW45 NADH dehydrogenase (Quinone) n=4 Tax=Proteobacte... 253 1e-65 UniRef50_Q6APF1 Probable hydrogenase, component F-formate hydrog... 249 2e-64 UniRef50_Q2RXM0 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospiril... 248 3e-64 UniRef50_B8IYV6 NADH dehydrogenase (Quinone) n=3 Tax=Desulfovibr... 234 7e-60 UniRef50_C1XWY6 Formate hydrogenlyase subunit 3/multisubunit Na+... 231 5e-59 UniRef50_A0LSU2 NADH dehydrogenase (Quinone) n=1 Tax=Acidothermu... 231 7e-59 UniRef50_A0QMU0 Hydrogenase-4, F subunit, putative n=6 Tax=Mycob... 226 1e-57 UniRef50_A1SQ78 NADH dehydrogenase (Quinone) n=1 Tax=Nocardioide... 221 4e-56 UniRef50_B3E6C2 NADH dehydrogenase (Quinone) n=14 Tax=Deltaprote... 210 1e-52 UniRef50_D2BJP8 Hydrogenase subunit, NADH dehydrogenase subunit ... 206 1e-51 UniRef50_C6PUG4 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 205 3e-51 UniRef50_C5CEV1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 192 4e-47 UniRef50_A7I7D1 NADH dehydrogenase (Quinone) n=1 Tax=Candidatus ... 188 5e-46 UniRef50_D1A6C9 NADH/Ubiquinone/plastoquinone (Complex I) n=13 T... 187 1e-45 UniRef50_Q8THY7 Hydrogenase-3 subunit (EchA-like protein) n=2 Ta... 183 1e-44 UniRef50_Q6APE8 Probable hydrogenase, component B-formate hydrog... 183 2e-44 UniRef50_Q609T5 Hydrogenase subunit n=1 Tax=Methylococcus capsul... 179 3e-43 UniRef50_C3NDS2 NADH dehydrogenase (Quinone) n=13 Tax=Archaea Re... 179 3e-43 UniRef50_A1RWL8 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum... 178 4e-43 UniRef50_Q8R9B0 Formate hydrogenlyase subunit 3/Multisubunit Na+... 175 3e-42 UniRef50_C0QBF3 HyfB n=1 Tax=Desulfobacterium autotrophicum HRM2... 174 6e-42 UniRef50_B2V8R6 NADH dehydrogenase (Quinone) n=1 Tax=Sulfurihydr... 173 2e-41 UniRef50_Q2FKT2 NADH dehydrogenase (Quinone) n=1 Tax=Methanospir... 171 6e-41 UniRef50_B1ZSE2 NADH dehydrogenase (Quinone) n=3 Tax=Bacteria Re... 171 6e-41 UniRef50_A6TVL5 NADH dehydrogenase (Quinone) n=1 Tax=Alkaliphilu... 171 7e-41 UniRef50_Q2RUH4 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteo... 171 9e-41 UniRef50_C0GJ30 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacte... 170 2e-40 UniRef50_B6AS28 NADH dehydrogenase (Quinone) n=3 Tax=Leptospiril... 169 2e-40 UniRef50_C8PJ79 ATP-binding protein n=1 Tax=Campylobacter gracil... 168 4e-40 UniRef50_Q0W2B5 Hydrogenase, membrane subunit 4-like protein (Hy... 167 6e-40 UniRef50_Q0F380 NADH dehydrogenase subunit N n=1 Tax=Mariprofund... 167 1e-39 UniRef50_C5A2R1 Formate hydrogenlyase II subunit D (Mhy2D) n=1 T... 167 1e-39 UniRef50_B2HHH3 Oxidoreductase n=6 Tax=Mycobacterium RepID=B2HHH... 167 1e-39 UniRef50_B6YWP6 Hydrogenase 4, subunit 3 n=3 Tax=Thermococcus Re... 166 2e-39 UniRef50_C7MLM1 Formate hydrogenlyase subunit 3/multisubunit Na+... 166 3e-39 UniRef50_B1ZSD9 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria Re... 165 4e-39 UniRef50_B2A693 Proton-translocating NADH-quinone oxidoreductase... 164 1e-38 UniRef50_B8J2B7 NADH dehydrogenase (Quinone) n=2 Tax=Desulfovibr... 163 1e-38 UniRef50_D1JBE0 Putative NADH-quinone oxidoreductase, subunit M ... 163 2e-38 UniRef50_Q3AB32 Carbon monoxide-induced hydrogenase, membrane an... 162 3e-38 UniRef50_C6NX32 Hydrogenase-4 component B / Formate hydrogenlyas... 162 3e-38 UniRef50_A0RMA9 Hydrogenase 4 membrane subunit n=2 Tax=Campyloba... 162 4e-38 UniRef50_A5FPH4 NADH dehydrogenase (Quinone) n=5 Tax=Dehalococco... 161 5e-38 UniRef50_A7GWM7 ATP-binding protein n=4 Tax=Epsilonproteobacteri... 161 6e-38 UniRef50_B9DJY9 Putative NADH dehydrogenase I chain L n=1 Tax=St... 161 7e-38 UniRef50_Q895D8 Sodium/proton antiporter shaA n=1 Tax=Clostridiu... 161 7e-38 UniRef50_C8W236 Hydrogenase, membrane subunit n=1 Tax=Desulfotom... 160 2e-37 UniRef50_Q21AT7 NADH dehydrogenase (Quinone) n=16 Tax=Alphaprote... 159 2e-37 UniRef50_B6YTW6 Hydrogenase 4, component B or formate hydrogen l... 158 4e-37 UniRef50_A5G8U2 NADH dehydrogenase (Quinone) n=13 Tax=Desulfurom... 157 6e-37 UniRef50_Q12ZH4 Na+/H+ antiporter subunit n=2 Tax=Methanosarcina... 157 1e-36 UniRef50_B1I6I5 NADH-quinone oxidoreductase subunit N n=1 Tax=Ca... 157 1e-36 UniRef50_A7HGW4 NADH dehydrogenase (Quinone) n=4 Tax=Anaeromyxob... 156 2e-36 UniRef50_B6YTX9 Hydrogenase 4, component F or formate hydrogen l... 156 2e-36 UniRef50_B8DNI8 NADH dehydrogenase (Quinone) n=4 Tax=Desulfovibr... 156 2e-36 UniRef50_D2LP95 NADH/Ubiquinone/plastoquinone (Complex I) n=3 Ta... 156 2e-36 UniRef50_C5A4P9 Membrane bound oxidoreductase, MbxH subunit (Mbx... 156 2e-36 UniRef50_Q73G56 Na+/H+ antiporter subunit, putative n=9 Tax=Wolb... 155 2e-36 UniRef50_Q2RXM5 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospiril... 155 3e-36 UniRef50_B2A3T0 NADH dehydrogenase (Quinone) n=2 Tax=Clostridia ... 155 4e-36 UniRef50_C7LSU3 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria Re... 155 5e-36 UniRef50_B8I2P9 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 155 5e-36 UniRef50_B8FUM3 NADH dehydrogenase (Quinone) n=3 Tax=Desulfitoba... 154 6e-36 UniRef50_D0WGR4 Hydrogenase subunit n=1 Tax=Slackia exigua ATCC ... 154 6e-36 UniRef50_Q12F20 NADH dehydrogenase (Quinone) n=37 Tax=Betaproteo... 154 7e-36 UniRef50_Q2FKT7 NADH dehydrogenase (Quinone) n=1 Tax=Methanospir... 154 8e-36 UniRef50_Q9UYP1 Hydrogenase 4, component F or formate hydrogen l... 154 9e-36 UniRef50_A9QPJ4 Formate hydrogenlyase subunit 3 n=1 Tax=Methylac... 153 2e-35 UniRef50_Q0ARA4 NADH dehydrogenase (Quinone) n=3 Tax=Hyphomonada... 152 3e-35 UniRef50_A7I7D4 NADH dehydrogenase (Quinone) n=3 Tax=Methanomicr... 152 3e-35 UniRef50_A3VPH5 NADH dehydrogenase/oxidoreductase n=1 Tax=Parvul... 152 4e-35 UniRef50_B6WWH3 Putative uncharacterized protein n=1 Tax=Desulfo... 152 4e-35 UniRef50_B5YKQ6 Na+/H+ antiporter subunit, putative n=1 Tax=Ther... 151 6e-35 UniRef50_C5EMF1 NADH dehydrogenase n=2 Tax=Clostridiales RepID=C... 149 2e-34 UniRef50_A1AUV4 NADH dehydrogenase (Quinone) n=2 Tax=Pelobacter ... 149 3e-34 UniRef50_Q11VC3 NADH dehydrogenase I chain L n=5 Tax=Bacteroidet... 149 3e-34 UniRef50_A1ALK0 NADH dehydrogenase (Quinone) n=2 Tax=Pelobacter ... 149 3e-34 UniRef50_C5A689 Membrane bound complex 2, subunit A (Mbc2A) n=2 ... 149 3e-34 UniRef50_B6YWQ6 Hydrogenase 4, subunit 3 n=2 Tax=Thermococcus Re... 149 3e-34 UniRef50_C0Z765 NADH-quinone oxidoreductase chain L n=2 Tax=Baci... 148 4e-34 UniRef50_Q0W6M6 Predicted oxidoreductase integral membrane compo... 148 5e-34 UniRef50_Q21TB5 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 148 5e-34 UniRef50_C7Q1G6 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycet... 148 5e-34 UniRef50_A1RWL4 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum... 148 5e-34 UniRef50_A0AL63 Complete genome n=20 Tax=Bacillales RepID=A0AL63... 148 6e-34 UniRef50_A8JYL0 Formate hydrogenlyase subunit D n=1 Tax=Thermoco... 147 9e-34 UniRef50_P23482 Hydrogenase-4 component B n=69 Tax=Bacteria RepI... 146 2e-33 UniRef50_Q2RXM6 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospiril... 146 2e-33 UniRef50_A6UVK0 NADH dehydrogenase (Quinone) n=2 Tax=cellular or... 145 3e-33 UniRef50_B0K5U2 NADH dehydrogenase (Quinone) n=6 Tax=Thermoanaer... 145 3e-33 UniRef50_Q1PZK0 Similar to membrane-bound [NiFe]-hydrogenase-3, ... 145 3e-33 UniRef50_A1ALQ0 Proton-translocating NADH-quinone oxidoreductase... 145 4e-33 UniRef50_C6CN10 NADH/Ubiquinone/plastoquinone (Complex I) n=15 T... 145 4e-33 UniRef50_B9ZEN4 Proton-translocating NADH-quinone oxidoreductase... 145 5e-33 UniRef50_B5Y906 Membrane bound hydrogenase, MbxH subunit n=1 Tax... 144 6e-33 UniRef50_Q67NV3 Na+/H+ antiporter subunit n=1 Tax=Symbiobacteriu... 144 6e-33 UniRef50_B2A694 NADH dehydrogenase (Quinone) n=1 Tax=Natranaerob... 144 8e-33 UniRef50_B5YKQ9 Hydrogenase 4, component B or formate hydrogen l... 144 9e-33 UniRef50_Q9UYN2 Hydrogenase 4, component B or formate hydrogen l... 144 1e-32 UniRef50_B7R512 NADH dehydrogenase subunit n n=1 Tax=Thermococcu... 142 3e-32 UniRef50_C8XAR9 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 142 4e-32 UniRef50_D1B457 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 142 4e-32 UniRef50_D1Z235 Putative NADH:ubiquinone dehydrogenase n=1 Tax=M... 141 5e-32 UniRef50_C0YTV8 NADH dehydrogenase I chain L n=1 Tax=Chryseobact... 141 7e-32 UniRef50_B3E6C5 NADH dehydrogenase (Quinone) n=4 Tax=Desulfuromo... 141 7e-32 UniRef50_B4UA31 NADH dehydrogenase (Quinone) n=1 Tax=Hydrogenoba... 141 7e-32 UniRef50_B6YQ51 NADH dehydrogenase I subunit L n=32 Tax=Bacteroi... 140 8e-32 UniRef50_Q1IS54 Proton-translocating NADH-quinone oxidoreductase... 140 9e-32 UniRef50_A7GV43 Proton-translocating NADH-quinone oxidoreductase... 140 1e-31 UniRef50_C0GN23 NADH dehydrogenase (Quinone) n=1 Tax=Desulfonatr... 140 1e-31 UniRef50_C6MX91 NADH dehydrogenase (Quinone) n=1 Tax=Geobacter s... 140 1e-31 UniRef50_B6YTY8 Membrane bound hydrogenase, MbhH subunit n=9 Tax... 140 1e-31 UniRef50_A7HGW3 NADH dehydrogenase (Quinone) n=4 Tax=Anaeromyxob... 139 2e-31 UniRef50_A5UV30 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria Re... 139 2e-31 UniRef50_Q895D7 Sodium/proton antiporter shaD n=1 Tax=Clostridiu... 139 2e-31 UniRef50_C6PUG7 NADH dehydrogenase (Quinone) n=1 Tax=Clostridium... 139 2e-31 UniRef50_B5IAP3 NADH-Ubiquinone/plastoquinone (Complex I), domai... 139 3e-31 UniRef50_A6DPK7 NADH-ubiquinone/plastoquinone family protein n=1... 139 3e-31 UniRef50_UPI00003845F5 COG0651: Formate hydrogenlyase subunit 3/... 139 3e-31 UniRef50_A3DNF9 Membrane bound hydrogenase subunit mbhH n=1 Tax=... 139 4e-31 UniRef50_B6YT76 Hydrogenase 4, component B or formate hydrogen l... 138 5e-31 UniRef50_C6HXN7 NADH/Ubiquinone/plastoquinone (Complex I) (Fragm... 138 5e-31 UniRef50_A9F578 NADH dehydrogenase I chain M n=1 Tax=Sorangium c... 138 6e-31 UniRef50_A6TVL4 NADH dehydrogenase (Quinone) n=2 Tax=Alkaliphilu... 138 6e-31 UniRef50_B0BZT2 Proton-translocating NAD(P)H-quinone oxidoreduct... 137 7e-31 UniRef50_A5UVF8 Proton-translocating NADH-quinone oxidoreductase... 137 8e-31 UniRef50_Q10880 Uncharacterized protein Rv0083/MT0090 n=15 Tax=M... 137 9e-31 UniRef50_Q9RGZ5 Na(+)/H(+) antiporter subunit A n=9 Tax=Firmicut... 137 1e-30 UniRef50_Q7UXC2 NADH dehydrogenase/oxidoreductase n=1 Tax=Rhodop... 137 1e-30 UniRef50_C0GJ41 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacte... 137 1e-30 UniRef50_B8FRJ9 Proton-translocating NADH-quinone oxidoreductase... 137 1e-30 UniRef50_A2BJA1 NADH-quinone oxidoreductase chain M n=1 Tax=Hype... 137 1e-30 UniRef50_C6D5D4 Proton-translocating NADH-quinone oxidoreductase... 137 1e-30 UniRef50_C5QQQ5 CPA3 family monovalent cation:proton (H+) antipo... 136 2e-30 UniRef50_Q7NHD8 NADH dehydrogenase subunit 5 n=1 Tax=Gloeobacter... 136 2e-30 UniRef50_Q649J3 NADH dehydrogenase/oxidoreductase n=4 Tax=Archae... 136 2e-30 UniRef50_B0VE74 pH adaptation potassium efflux system transmembr... 136 2e-30 UniRef50_A6LXP7 Proton-translocating NADH-quinone oxidoreductase... 136 2e-30 UniRef50_A6DPK4 NADH-Ubiquinone/plastoquinone (Complex I), vario... 135 3e-30 UniRef50_B1ZSE3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus te... 135 5e-30 UniRef50_A3DM91 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 135 5e-30 UniRef50_D2RZ77 Proton-translocating NADH-quinone oxidoreductase... 135 5e-30 UniRef50_Q21TB8 NADH dehydrogenase (Quinone) n=2 Tax=Proteobacte... 134 6e-30 UniRef50_B4SLF9 NADH dehydrogenase (Quinone) n=20 Tax=cellular o... 134 6e-30 UniRef50_UPI00005100B6 putative monovalent cation/H+ antiporter ... 134 6e-30 UniRef50_C5A3D6 Formate hydrogenlyase I subunit D (Mhy1D) n=2 Ta... 134 7e-30 UniRef50_D2RET4 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 134 8e-30 UniRef50_Q52978 Probable K(+)/H(+) antiporter subunit A/B n=110 ... 134 8e-30 UniRef50_B5EN60 Proton-translocating NADH-quinone oxidoreductase... 134 9e-30 UniRef50_B6J444 Sodium/proton antiporter protein n=5 Tax=Coxiell... 134 9e-30 UniRef50_A9FF71 Hydrogenase-4 component F n=1 Tax=Sorangium cell... 133 1e-29 UniRef50_Q6GBK7 Putative antiporter subunit mnhA2 n=63 Tax=Staph... 133 2e-29 UniRef50_B2KDU2 NADH dehydrogenase (Quinone) n=1 Tax=Elusimicrob... 132 3e-29 UniRef50_B1L375 NADH:ubiquinone oxidoreductase subunit 4 (Chain ... 132 3e-29 UniRef50_B8J1C9 Proton-translocating NADH-quinone oxidoreductase... 132 4e-29 UniRef50_Q04YB3 NADH dehydrogenase (Ubiquinone), L chain n=7 Tax... 132 4e-29 UniRef50_B8D3Q4 Hydrogenase 4, component F or formate hydrogen l... 131 5e-29 UniRef50_B3EIA1 Proton-translocating NADH-quinone oxidoreductase... 131 5e-29 UniRef50_C1F220 NADH dehydrogenase I, L subunit n=2 Tax=Bacteria... 131 7e-29 UniRef50_B5YKJ0 NADH-quinone oxidoreductase chain l n=1 Tax=Ther... 131 7e-29 UniRef50_C9RKX6 Proton-translocating NADH-quinone oxidoreductase... 131 7e-29 UniRef50_A8H7R2 NADH dehydrogenase (Quinone) n=8 Tax=Proteobacte... 131 8e-29 UniRef50_A7JYE7 Na(+) H(+) antiporter subunit A/Na(+) H(+) antip... 131 8e-29 UniRef50_B6YTW5 NADH dehydrogenase (Quinone) n=1 Tax=Thermococcu... 129 2e-28 UniRef50_C7R7H2 Proton-translocating NADH-quinone oxidoreductase... 129 2e-28 UniRef50_C5NVG1 Na(+)/H(+) antiporter subunit A n=1 Tax=Gemella ... 129 2e-28 UniRef50_Q9PMA7 NADH-quinone oxidoreductase subunit L n=43 Tax=E... 129 3e-28 UniRef50_Q1H3T5 NADH dehydrogenase (Quinone) n=12 Tax=Proteobact... 129 3e-28 UniRef50_A6Q6W0 Ni-Fe hydrogenase, membrane subunit HycC/HyfB n=... 129 3e-28 UniRef50_A9B485 Proton-translocating NADH-quinone oxidoreductase... 129 3e-28 UniRef50_C0JX69 Subunit 5 of NADH-plastoquinone oxidoreductase n... 129 3e-28 UniRef50_A6Q8K1 NADH-quinone oxidoreductase, chain M n=3 Tax=Eps... 128 4e-28 UniRef50_B9XHI6 Proton-translocating NADH-quinone oxidoreductase... 128 4e-28 UniRef50_Q3ITM9 pH adaptation potassium efflux system protein D ... 128 4e-28 UniRef50_A8ERK5 NADH-quinone oxidoreductase, L subunit n=1 Tax=A... 128 5e-28 UniRef50_Q3Z7Z2 Proton-translocating NADH-quinone oxidoreductase... 128 5e-28 UniRef50_Q2FZV1 Na(+)/H(+) antiporter subunit A1 n=72 Tax=Bacill... 128 6e-28 UniRef50_D2QSX4 Proton-translocating NADH-quinone oxidoreductase... 128 6e-28 UniRef50_B1KJV8 Proton-translocating NADH-quinone oxidoreductase... 127 8e-28 UniRef50_A9A3Z6 Proton-translocating NADH-quinone oxidoreductase... 127 8e-28 UniRef50_C1SM60 NADH dehydrogenase subunit L n=1 Tax=Denitrovibr... 127 1e-27 UniRef50_C5EMF0 Putative uncharacterized protein n=1 Tax=Clostri... 127 1e-27 UniRef50_C8NL94 NADH dehydrogenase (Quinone) n=18 Tax=Bacteria R... 127 1e-27 UniRef50_A2SS19 Membrane bound hydrogenase subunit mbhH n=3 Tax=... 127 1e-27 UniRef50_Q49W91 Na(+)/H(+) antiporter subunit A1 n=19 Tax=Bacill... 127 2e-27 UniRef50_Q1QZ48 NADH dehydrogenase (Quinone) n=15 Tax=cellular o... 126 2e-27 UniRef50_B8CXD7 NADH dehydrogenase I subunit L n=1 Tax=Halotherm... 126 2e-27 UniRef50_B2IHV5 Proton-translocating NADH-quinone oxidoreductase... 126 2e-27 UniRef50_Q8RDB8 NADH:ubiquinone oxidoreductase subunit 5 (Chain ... 126 2e-27 UniRef50_C7P4L7 Proton-translocating NADH-quinone oxidoreductase... 126 2e-27 UniRef50_A4SFL3 NADH dehydrogenase (Quinone) n=6 Tax=Bacteria Re... 126 2e-27 UniRef50_B0R3U9 NADH dehydrogenase-like complex subunit L n=9 Ta... 126 3e-27 UniRef50_C1TKY1 Formate hydrogenlyase subunit 3/multisubunit Na+... 126 3e-27 UniRef50_A8LTG8 NADH dehydrogenase (Quinone) n=58 Tax=Proteobact... 125 3e-27 UniRef50_B1WQD4 NADH dehydrogenase subunit 5 n=9 Tax=Cyanobacter... 125 3e-27 UniRef50_B3QY40 Proton-translocating NADH-quinone oxidoreductase... 125 3e-27 UniRef50_Q1AVJ0 Proton-translocating NADH-quinone oxidoreductase... 125 3e-27 UniRef50_B1ZRS2 Proton-translocating NADH-quinone oxidoreductase... 125 4e-27 UniRef50_Q9V0S9 NuoM NADH dehydrogenase I, subunit M n=3 Tax=Pyr... 125 4e-27 UniRef50_Q5FC98 NADH-quinone oxidoreductase chain L n=18 Tax=Ric... 125 5e-27 UniRef50_B9LUW7 NADH/Ubiquinone/plastoquinone (Complex I) n=13 T... 125 5e-27 UniRef50_Q9K1B0 NADH-quinone oxidoreductase subunit L n=127 Tax=... 124 6e-27 UniRef50_B8D5B8 Formate hydrogenlyase subunit 3/Multisubunit Na+... 124 8e-27 UniRef50_B2KDU4 NADH dehydrogenase (Quinone) n=1 Tax=Elusimicrob... 124 8e-27 UniRef50_B9LA03 CooM n=1 Tax=Nautilia profundicola AmH RepID=B9L... 124 9e-27 UniRef50_UPI0001C351BA sodium/proton antiporter shaD n=1 Tax=Clo... 124 1e-26 UniRef50_Q9I0J1 NADH-quinone oxidoreductase subunit L n=113 Tax=... 124 1e-26 UniRef50_Q2RTW0 NADH dehydrogenase (Quinone) n=4 Tax=Proteobacte... 124 1e-26 UniRef50_D1A433 Proton-translocating NADH-quinone oxidoreductase... 123 2e-26 UniRef50_Q1NS05 NADH dehydrogenase (Quinone) n=1 Tax=delta prote... 123 2e-26 UniRef50_Q6MDQ5 Putative NADH-ubiquinone oxidoreductase chain L ... 123 2e-26 UniRef50_C4V3R7 NADH dehydrogenase (Quinone) n=1 Tax=Selenomonas... 123 2e-26 UniRef50_A7HHY8 Proton-translocating NADH-quinone oxidoreductase... 123 2e-26 UniRef50_C0VMK3 NADH dehydrogenase I subunit L n=1 Tax=Acinetoba... 122 2e-26 UniRef50_C6VXR9 Proton-translocating NADH-quinone oxidoreductase... 122 2e-26 UniRef50_D2BHY2 NADH:quinone oxidoreductase subunit 5 (Chain L) ... 122 2e-26 UniRef50_A9B6Y2 Proton-translocating NADH-quinone oxidoreductase... 122 3e-26 UniRef50_Q1IS43 Proton-translocating NADH-quinone oxidoreductase... 122 3e-26 UniRef50_Q02CT3 Proton-translocating NADH-quinone oxidoreductase... 122 4e-26 UniRef50_UPI00003837CC COG1009: NADH:ubiquinone oxidoreductase s... 122 4e-26 UniRef50_C6A3Z7 Membrane-bound hydrogenase MBH 2, subunit Mbh2H ... 122 4e-26 UniRef50_D2MI08 NADH dehydrogenase (Quinone) n=1 Tax=Candidatus ... 122 4e-26 UniRef50_B5IUC0 NADH-Ubiquinone/plastoquinone (Complex I), domai... 122 4e-26 UniRef50_A1ZLY6 NAD(P)H-quinone oxidoreductase chain 5 (NAD(P)Hd... 122 4e-26 UniRef50_B4U8H9 Proton-translocating NADH-quinone oxidoreductase... 122 5e-26 UniRef50_P77416 Hydrogenase-4 component D n=66 Tax=Bacteria RepI... 122 5e-26 UniRef50_Q28T51 Proton-translocating NADH-quinone oxidoreductase... 121 5e-26 >UniRef50_P77437 Hydrogenase-4 component F n=52 Tax=Bacteria RepID=HYFF_ECOLI Length = 526 Score = 1041 bits (2693), Expect = 0.0, Method: Compositional matrix adjust. Identities = 526/526 (100%), Positives = 526/526 (100%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA Sbjct: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH Sbjct: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL Sbjct: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA Sbjct: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA Sbjct: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN Sbjct: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 Query: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL Sbjct: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 Query: 421 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIP 480 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIP Sbjct: 421 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIP 480 Query: 481 QPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEKHSER 526 QPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEKHSER Sbjct: 481 QPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEKHSER 526 >UniRef50_A1JTZ4 Hydrogenase-4 component F n=19 Tax=Bacteria RepID=A1JTZ4_YERE8 Length = 545 Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/510 (68%), Positives = 408/510 (80%), Gaps = 5/510 (0%) Query: 14 PLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHID 73 PL+ SLL FACR +A T +H GI+LLLI+AL VV A GEI A WLHID Sbjct: 14 PLIASLLAFACRALGSAARMATTWVHFAGISLLLIVALTVVCRVAVGGEILAVHHWLHID 73 Query: 74 GLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSN 133 L LFLAILGVIGF+TG+YS+GYMRHEV +GE++ TLC+YYGFFHLFLFTMLLVVTSN Sbjct: 74 SLSALFLAILGVIGFITGLYSLGYMRHEVNNGEITVSTLCNYYGFFHLFLFTMLLVVTSN 133 Query: 134 NLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASV 193 NLI+MW IEATTLSSAFLVG+YGQRSSLEAAWKYIIICTVGVAFGL+GTVLVYANAA+V Sbjct: 134 NLILMWVGIEATTLSSAFLVGLYGQRSSLEAAWKYIIICTVGVAFGLYGTVLVYANAANV 193 Query: 194 MPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPV 253 + AIFW+ V + + LDP+LM LAFVF+LIGFGTKTGLFPMH+WLPDAHSEAPSP Sbjct: 194 LADPSSAIFWTVVAEHAKELDPSLMHLAFVFILIGFGTKTGLFPMHSWLPDAHSEAPSPT 253 Query: 254 SALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRL 313 SALLSAVLLNCALLV+IRYYIII AIG FP LLL+FGM+SVAV+AFFIL QRD+KRL Sbjct: 254 SALLSAVLLNCALLVIIRYYIIISAAIGPHFPQMLLLVFGMMSVAVSAFFILAQRDMKRL 313 Query: 314 LAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVV 373 LAYSSVENMGL+AV LGIGGPLG+ AAL H +NHSLAKTLLFCGSGNVLLKYGTRD+ + Sbjct: 314 LAYSSVENMGLIAVALGIGGPLGVLAALFHTMNHSLAKTLLFCGSGNVLLKYGTRDMGAI 373 Query: 374 CGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVL 433 G++++ P TAV+ GGALALAGMPPFN+F+SEFM + A + H+ ++++LLLLLTLVL Sbjct: 374 KGIIRVAPLTAVMLAGGALALAGMPPFNVFISEFMVVAAAIKTGHITLVIVLLLLLTLVL 433 Query: 434 AGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTI 493 AGLVRM A ++ PP AV++G+LG LTT+PM ILL++ML +G HIP PV R+L A+ I Sbjct: 434 AGLVRMIASTVLGTPPTAVSKGELGILTTAPMAILLLLMLLLGVHIPTPVTRLLTDAAQI 493 Query: 494 VLSGTHDLPAQRS---TWHDFLPSGTASVS 520 VL+ P Q W LPS +S Sbjct: 494 VLNNDSRDPIQPPFMLPWQ--LPSPIKDIS 521 >UniRef50_C7MLM5 Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=4 Tax=Bacteria RepID=C7MLM5_CRYCD Length = 533 Score = 484 bits (1247), Expect = e-135, Method: Compositional matrix adjust. Identities = 254/512 (49%), Positives = 343/512 (66%), Gaps = 7/512 (1%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVV-QTAAD 59 M +S + L+ PL+ L A + +H L +T +L+L VV A Sbjct: 1 MDFSALLLTLIAVPLVAGLF-MAVLPSKAVPRVAYEAIHLLSVTAACVLSLAVVVHVMAG 59 Query: 60 AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 + A G+WLH+D LG +F+A++GVIGFLTG+YS+ Y+R++VA G ++ + +Y FF Sbjct: 60 GKPVDALGMWLHLDALGSVFVALIGVIGFLTGLYSVPYVRNDVAIGHMNNARVKQFYLFF 119 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFG 179 LF+FTML+V TSNN+I+MW IEATTLS+ FLVG Y + SLEAAWKY+I+CT GVAFG Sbjct: 120 SLFIFTMLVVATSNNIILMWVGIEATTLSTVFLVGAYDAKLSLEAAWKYVIVCTAGVAFG 179 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L+ TVL+YANAA VM AIF + ++ ++ LD L+ +AFVF IGFGTK GLFPMH Sbjct: 180 LYSTVLIYANAADVMANPHEAIFMTSIMPYATQLDGMLVQVAFVFAAIGFGTKAGLFPMH 239 Query: 240 AWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLPDAHSEAPSPVS LLS VLL CA+L+++R+YI+ CQ+IGS FP ++LI G+LSV + Sbjct: 240 TWLPDAHSEAPSPVSGLLSGVLLKCAMLIIMRFYILACQSIGSQFPRLVMLIIGILSVFM 299 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 AA + Q D+KR LAY S EN+G+VA+ LG GGPLGI AALLH + H K LLFC SG Sbjct: 300 AALAVFSQDDLKRKLAYHSCENVGIVALFLGFGGPLGIAAALLHCITHGFTKALLFCISG 359 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 NVL+KYGTRDLN + G+LK MP T VL G ALAG PPF +F+SE ITAG+ Sbjct: 360 NVLMKYGTRDLNKISGILKTMPATGVLMSIGFFALAGFPPFAMFVSEITGITAGVIEGQW 419 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHI 479 +IV+ ++ LT+V+A + + +M K P+ + +GD+ + P V+L+ ++L G + Sbjct: 420 FVIVVFVIALTIVVAACAHVVTQAVMGKVPEGMKKGDVSPVALIPEVVLVALILWFGVAM 479 Query: 480 PQPVIRILAGASTIVL-----SGTHDLPAQRS 506 PQPV+ + A+ IVL + H+ P R Sbjct: 480 PQPVLNGIEQATAIVLQQDDTAALHEAPLFRD 511 >UniRef50_A4E716 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E716_9ACTN Length = 521 Score = 435 bits (1118), Expect = e-120, Method: Compositional matrix adjust. Identities = 233/510 (45%), Positives = 329/510 (64%), Gaps = 7/510 (1%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M S++ LL PL+FSL+ A K ++ L+++ + L+L++ T + Sbjct: 1 MDVSMLTVALLACPLVFSLIMAALPKT--TSYSVFAGLNTISVAATLVLSVVTAGTMLSS 58 Query: 61 GE-IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 G+ I A GLWLH+D L +F+ ++G+IGF+TG+YSI Y++ ++ + YY F Sbjct: 59 GQNIDALGLWLHLDSLSSIFVLLVGIIGFITGVYSISYIKIDIKEKTMPAERTKQYYALF 118 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFG 179 LF+FTMLL SNN+I+ WAA+EATTLS+ FLVGIY + +LEA+WKY ++CT GVAFG Sbjct: 119 SLFVFTMLLACLSNNIILTWAAVEATTLSTVFLVGIYKNKQALEASWKYAMVCTAGVAFG 178 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 LFGT+L+YANAA +MP A A F + ++ + DP L+ LAF F++IGFGTK GLFPMH Sbjct: 179 LFGTLLIYANAADIMPNAHEAAFLTSIMPYADQFDPMLVRLAFAFIVIGFGTKAGLFPMH 238 Query: 240 AWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLPDAHS+APSPVSALLS VLL CA+LV+IR+Y + +G +P LLLI G LS+ V Sbjct: 239 TWLPDAHSQAPSPVSALLSGVLLKCAMLVIIRFYSLSIITVGDTYPRTLLLILGTLSILV 298 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 AA I Q DIKR AYSSV+N+G+VA+ LGIGGPLGI A LLH + H K L FC +G Sbjct: 299 AALCIFKQDDIKRRFAYSSVDNVGVVALCLGIGGPLGIAACLLHCIFHGFTKALAFCMAG 358 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 N+ Y TRDLN + G+++I P TA L LALA PPF +F+SEF+T AG+ + Sbjct: 359 NIQHIYHTRDLNKIKGVVEIAPVTAALTIIALLALAAFPPFALFISEFLTFVAGIQSGPI 418 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHI 479 ++VL+ + LT V L +A + + K P+ + R ++ L P + L ++++ G Sbjct: 419 WVVVLVAIGLTGVYFALTGIALKSIFGKAPEGMKRHEVPALMIIPEIALAIVVMWFGIAT 478 Query: 480 PQPVIRILAGASTIVLSGT----HDLPAQR 505 P + + A+++VL+ + H+ P R Sbjct: 479 PVAITSGVEDATSVVLNQSVEELHEAPLYR 508 >UniRef50_Q0W2B8 Hydrogenase, membrane subunit 1-like protein (EchA-like) n=2 Tax=cellular organisms RepID=Q0W2B8_UNCMA Length = 487 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 222/484 (45%), Positives = 334/484 (69%), Gaps = 7/484 (1%) Query: 10 LLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLW 69 LL+ PL+ + LC+ + +R TV ++ +LG ++ +++ T G + + GLW Sbjct: 6 LLIIPLITAALCYLIKHKR-----TVEIVSTLGALAIMAGCVYLAYTVFTRGPV-SGGLW 59 Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 ++D LG L I+ IG IYSIGY+ +E ++ L Y+ FFH+F+FTMLLV Sbjct: 60 -YVDSLGAYMLVIISFIGLAAAIYSIGYLGYEYKEKKIDLGRLRYYFTFFHVFIFTMLLV 118 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 TS+NL +MW AIEATTL+SAFLVG Y + +S+EAAWKYIIIC+VG+ L GT+L+YA+ Sbjct: 119 CTSSNLGIMWIAIEATTLASAFLVGFYNKDTSVEAAWKYIIICSVGITLALLGTILLYAS 178 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 + + + ++ A+ W + +++ LDPTL+ +AF+ ++IG+GTK G PMH WLPDAHSEA Sbjct: 179 SVNTLGESADALNWPMLAEKAKSLDPTLLKIAFILVIIGYGTKAGFAPMHTWLPDAHSEA 238 Query: 250 PSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRD 309 P+P+S LLS VLLNCA+ ++RY+II A+G DF LL++FG+LS+A AA FI++Q+D Sbjct: 239 PTPISGLLSGVLLNCAMYGILRYHIITTNALGPDFSGTLLIVFGLLSLAAAAAFIIIQKD 298 Query: 310 IKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRD 369 KRLLAYSS+E+MG++A+ GIGG +GIF ALLHILNH++ K+L+F G+GN+LLK+ T++ Sbjct: 299 YKRLLAYSSIEHMGIIAIGFGIGGAVGIFGALLHILNHAVTKSLMFFGAGNILLKFKTKN 358 Query: 370 LNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLL 429 ++ V G+ +MP+TA+ F GALA+ G PPF+IF+SE + + AG + ++++ VL LLLL Sbjct: 359 IDEVKGIAALMPWTAMCFVAGALAITGSPPFSIFVSEIIILIAGFTQGNIVVSVLYLLLL 418 Query: 430 TLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAG 489 ++ AG + R++ +P +G+ +L M +LL+ L MG ++P + IL Sbjct: 419 VIIFAGFMYHVGRMVFGEPAPGTIKGEPNYLGLCVMAVLLLATLIMGVYVPLALSDILTQ 478 Query: 490 ASTI 493 TI Sbjct: 479 IVTI 482 >UniRef50_B8I2P6 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Clostridium RepID=B8I2P6_CLOCE Length = 495 Score = 355 bits (912), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 180/430 (41%), Positives = 283/430 (65%), Gaps = 5/430 (1%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 ++D L G L I + FL +YSI Y E+ + ++ L YY + F+ +M+L Sbjct: 63 FYMDSLSGYILFITTLAFFLVSLYSISYFGQELKNKVITIRKLKLYYSLSNAFVLSMILA 122 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 +T+ N+ VMW +IEATTL+SAFLVG Y + ++EAAWKY+IIC+VG+ F L G +L++ + Sbjct: 123 LTTRNMGVMWISIEATTLASAFLVGFYNNKRAIEAAWKYLIICSVGITFALLGIILLFYS 182 Query: 190 AASVMPQAEMA-IFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 + + A ++ + WS ++K +S LDP+++ +AF+F+LIGFGTK G PMH WLPDAHS+ Sbjct: 183 STVKLGGARISGMDWSYLIKYASALDPSILKIAFIFILIGFGTKVGFSPMHTWLPDAHSQ 242 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQAIGS-DFPNRLLLIFGMLSVAVAAFFILVQ 307 APSPVSALLS VLLN A+ +IR I+ + +GS ++ LL++ +LS+ AA FILVQ Sbjct: 243 APSPVSALLSGVLLNTAMYGVIRVMSIVNKCLGSSNYTGNLLIVLSVLSIGTAAVFILVQ 302 Query: 308 RDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGT 367 +D KR+LAYSS+E+MG++A+ LG+ P+ IFAAL H NH++ K +LF +GNV LK+ T Sbjct: 303 QDYKRILAYSSIEHMGIIALGLGVCTPISIFAALYHTFNHAMTKLMLFLATGNVYLKHHT 362 Query: 368 RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLL 427 + ++ + G++K MP T ++F G A+ GMPPF +F+SEF T+ + ++ LLL+ Sbjct: 363 KKISSIRGLIKTMPVTGIVFVLGTFAITGMPPFGVFMSEFNTVVGTIFSKRYIVTALLLI 422 Query: 428 LLTLVLAGLVRMAARVLMAK--PPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIR 485 L++V AG + ++ PQ + +G++ + + ++ILL + + G +IP P Sbjct: 423 FLSMVFAGFTKQLGKMFYGNNSNPQ-IKKGEIDIIGPAVLIILLCITVLAGIYIPVPFKE 481 Query: 486 ILAGASTIVL 495 ++ + I+L Sbjct: 482 LMENTTDIIL 491 >UniRef50_C8W239 Hydrogenase 4, membrane subunit n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W239_DESAS Length = 489 Score = 342 bits (877), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 190/453 (41%), Positives = 293/453 (64%), Gaps = 9/453 (1%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSL--GITLLLILALWVVQTAADAGEI 63 M LLL P++ ++LCF R SA + + +L G T A++ + A +G Sbjct: 1 MLYLLLAVPVITAVLCFL--PMRASAVEKINIWGALLTGCT-----AIYCIFQALVSGSA 53 Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 +L +D L +F+ I+GV+G + +Y++ Y+R + GEL ++G HLFL Sbjct: 54 AVKSSFLVLDALSSVFVFIIGVVGTICCLYAVSYLRRDQERGELEQRRTGIFFGLLHLFL 113 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGT 183 +M L V ++NL VMW AIEATT+ SA LVG YG + SLEAAWKYIIICTVG+AF + G Sbjct: 114 ASMYLAVLADNLGVMWVAIEATTIVSALLVGFYGHKESLEAAWKYIIICTVGIAFAMLGI 173 Query: 184 VLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLP 243 + Y + E+++ W + + +DP+LM LAF+F+L+G+GTK GLFP+H WLP Sbjct: 174 IFTYYAVRGISGGEEISLSWRLLFSMAGQIDPSLMKLAFIFVLVGYGTKAGLFPLHTWLP 233 Query: 244 DAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFF 303 DAHS+APSPVSALLS VLLNCA+ +IR++++ +++G +F +LL+IFG+LS+ + F Sbjct: 234 DAHSQAPSPVSALLSGVLLNCAVYAIIRFHLLTVKSVGGNFSAKLLIIFGLLSMVGSLPF 293 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLL 363 ILVQ+DIKRLLAYSSVE++G++ + +GIGG LG ALLH++NH+L K++LF +G + Sbjct: 294 ILVQKDIKRLLAYSSVEHIGIIVLGVGIGGVLGYTGALLHLINHALGKSVLFLSAGTLTQ 353 Query: 364 KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIV 423 KY ++ + + G+ +++P T+ +F LA+ G PPF +F+SE + G A + Sbjct: 354 KYNSKLIPKMKGIGQLLPITSTVFMASLLAIGGAPPFGLFISELNVASGGFAYVGKSVGF 413 Query: 424 LLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGD 456 + L+++ +V AGL+ A ++ + P+ +G+ Sbjct: 414 IFLMVIAIVFAGLIYFAGKMYFSNLPKRFIQGE 446 >UniRef50_A7ZBL2 Hydrogenase-4 component F n=6 Tax=Epsilonproteobacteria RepID=A7ZBL2_CAMC1 Length = 493 Score = 336 bits (861), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 165/419 (39%), Positives = 252/419 (60%), Gaps = 1/419 (0%) Query: 59 DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 G ++ +L +D LG +FL ++ V GF+ YSI YMR E+ G + L YY Sbjct: 52 SGGTFYSFDKFLFLDSLGCVFLVLIAVTGFIVNFYSIHYMRWELEDGHIHLSDLKKYYAL 111 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAF 178 H+F+FTM L V NN+ MWAAIEATTL+S FLV I+ + S E+ +KYI++C++G+AF Sbjct: 112 SHVFIFTMTLSVICNNVAFMWAAIEATTLASVFLVAIHKDQKSTESGYKYIVLCSIGLAF 171 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 L+ TVL+Y+ S + E ++ +S ++ + L+P L FVF LIGFGTK GL P Sbjct: 172 ALYATVLLYSATYSTLGDGEASMQFSSIMANAKNLNPDAAKLIFVFALIGFGTKAGLAPT 231 Query: 239 HAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 H WLPD H+E P+P+SALLS VLL CA+L L+RYY I QA+G F ++++ G +++ Sbjct: 232 HTWLPDVHAEGPAPISALLSGVLLKCAMLALLRYYAITAQAVGFSFVEGVMIVSGTITLF 291 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 VA FF++ Q ++KR+ AY S+ +MG++A LG+GG G+FAA+ H L HS K L FC + Sbjct: 292 VAGFFLIRQHNVKRMFAYHSIVHMGVIAFALGVGGKFGLFAAIFHCLAHSFTKALAFCST 351 Query: 359 GNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH 418 GN+ YG +D++ + GM+KI P T ++FG +L G+P F IF+SE+ + Sbjct: 352 GNIARIYGHKDMSKMGGMVKIAPITTIMFGAAVCSLVGVPAFAIFVSEYNVFVGAITSGQ 411 Query: 419 LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ-AVNRGDLGWLTTSPMVILLVMMLAMG 476 + + L + L ++ +P V+ ++ P++ L +++ G Sbjct: 412 YIAVALFAIALAVIFIADFAHFNMASFGEPKGVVVHNKEMSLFENLPLIALCALIIIFG 470 >UniRef50_D1B460 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Campylobacteraceae RepID=D1B460_SULD5 Length = 489 Score = 332 bits (850), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 172/469 (36%), Positives = 287/469 (61%), Gaps = 7/469 (1%) Query: 9 LLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGL 68 L+L+ P++ S++ F C +R ++V ++ S ++ L++A + E+FA Sbjct: 6 LILIVPMVCSIIMF-CMPQRFKVLQSVHIVLSFIVSFFLLMA---ISDVVKGNELFAFEH 61 Query: 69 WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLL 128 +L +D +G +FL+++ + G L +Y+ YM+ E+ G ++ + +Y+ +F +TM L Sbjct: 62 FLFLDAMGAIFLSLIAITGLLVNVYATTYMKWELEEGHMNVREVKNYFALSFIFTWTMSL 121 Query: 129 VVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 V NN+ MWAAIEATTL+S FLV + + S E+ +KYI++C++G+AF L+ T+L++ Sbjct: 122 SVLCNNIAFMWAAIEATTLASVFLVAVKNDKKSTESGYKYIVLCSIGLAFALYATILLF- 180 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 +AA+ + + A+ ++ +L + L+D + L FV LIGFGTK G P H WLPD H+E Sbjct: 181 SAANGNVEGD-AMLYTNLLAHADLIDKEALKLIFVLALIGFGTKAGFAPTHTWLPDVHAE 239 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQR 308 P+P SALLS +LL CALL L+RYY I+ +G DF ++++ L++ ++AFF++ Q Sbjct: 240 GPAPTSALLSGILLKCALLGLVRYYAIVANGVGFDFVESVMIVSATLTLFISAFFLIRQH 299 Query: 309 DIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTR 368 ++KR+ AY SV +MG++A LG+GG +G+FAAL H + HS K L FC +GN+ YGT+ Sbjct: 300 NVKRMFAYHSVAHMGVIAFGLGVGGAIGLFAALFHCVAHSFTKALAFCSTGNIARIYGTK 359 Query: 369 DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT-AGLARNHLLIIVLLLL 427 D+ + GM++I P TAVLFG +L G+P F IF+SEF+ A + ++L+ + L Sbjct: 360 DMTKMGGMIRIAPLTAVLFGIAICSLVGVPGFAIFVSEFLIFKAAAIDGKYVLMGIFALA 419 Query: 428 LLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMG 476 L + +A + + G++ P++ L V+++A G Sbjct: 420 LAIIFIADFSHFFLAAFGKVEGKVEHHGEMKLSENLPLIALAVLIVAFG 468 >UniRef50_Q24ST7 Hydrogenase-4 component F n=3 Tax=Desulfitobacterium RepID=Q24ST7_DESHY Length = 499 Score = 323 bits (827), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 181/431 (41%), Positives = 274/431 (63%), Gaps = 13/431 (3%) Query: 73 DGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTS 132 D L L L ++ VI +YS YM HEVA G++ L YY + +F+ TML VV++ Sbjct: 60 DALSALLLGVIVVIAAYVIVYSFSYMEHEVAAGKVPQSRLPRYYFWVWMFIGTMLWVVST 119 Query: 133 NNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAAS 192 NL ++W IE TTL++A LVG Y Q++++EAAWKYI++CTVG++F L GT+++YA + Sbjct: 120 PNLGLLWVGIEGTTLATALLVGFYRQKTAVEAAWKYIVLCTVGISFALLGTMILYAASGR 179 Query: 193 VMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSP 252 + + A+ W ++ + LDP L+ L +F IG+G K G PMH WLPDAHS+APSP Sbjct: 180 INGYSLAALDWRLLVGMAPQLDPALVKLGCIFAFIGYGAKVGFVPMHPWLPDAHSQAPSP 239 Query: 253 VSALLSAVLLNCALLVLIRYYIIICQ-AIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIK 311 VSALLS VLLNCAL ++R++I++ Q +G DF +LLL+FG++S+ FIL+Q+DIK Sbjct: 240 VSALLSGVLLNCALYAILRWHILVRQTGLGPDFSGKLLLVFGLISLGAMMAFILLQKDIK 299 Query: 312 RLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLN 371 RLLAYSSVE+MG++A+ LG+G PL ++ A H++ H+L K LF G V+ GTR + Sbjct: 300 RLLAYSSVEHMGIIALGLGLGTPLAVWGACFHLILHALTKANLFVVVGRVVQMMGTRQIP 359 Query: 372 VVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLL-LLLT 430 + G++ + P+T + G LA+ GMPPF F SE ++I AG +NH I+ L L L Sbjct: 360 KIRGVMSLWPYTGGILFMGLLAITGMPPFGTFRSE-ISIMAGFFQNHHPILGFLTALFLA 418 Query: 431 LVLAGLVRMAARVLMAKPPQAV--NRG---DLGWLTTSPMVILLVMMLAMGTHIPQPVIR 485 ++ AG + +L P + ++G ++ WL PM+++L+ +G +P+P+ + Sbjct: 419 VIFAGFLYHFLGMLFGTPGERCLKDKGEGKEVLWLAV-PMILVLM----LGVFVPEPLNQ 473 Query: 486 ILAGASTIVLS 496 L ++L Sbjct: 474 ALNQVVELILG 484 >UniRef50_B4UA28 NADH dehydrogenase (Quinone) n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA28_HYDS0 Length = 480 Score = 319 bits (817), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 163/424 (38%), Positives = 271/424 (63%), Gaps = 5/424 (1%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 G + +D L + + I+ V+GFLT +YSIGY+ E + L + ++Y + + F+F+M Sbjct: 54 GTYFTLDSLNIVLIGIVSVVGFLTYLYSIGYLEKEKS---LKESKIKEFYLWINTFMFSM 110 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLV 186 LL+V+++NL +MW +IEATTLS+ FL+ Y ++++EA+WKYI++C++G+A LFG +L+ Sbjct: 111 LLLVSTSNLGIMWVSIEATTLSTTFLISFYKNKTAVEASWKYIMLCSLGIALALFGIILI 170 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 Y +++ ++ W ++ + +D L+ +AFVF+L+GFGTK GL P+H WLPDAH Sbjct: 171 YFGVINIIGGGLYSLDWQNIMPIADKIDKNLLKIAFVFVLVGFGTKMGLAPLHFWLPDAH 230 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILV 306 SEAP+P+SAL+S+VLL+C+ +IR + I +A F +L G+ S+ +A+ FI Sbjct: 231 SEAPTPISALMSSVLLSCSFYTIIRIFSIESKAGIGAFTYDTMLYIGLFSIVLASIFIPR 290 Query: 307 QRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG 366 RD KRLLAYS++E+MG++A LG+G GIFA+LL ++ H+L K L+F SG++L+ Sbjct: 291 SRDYKRLLAYSTMEHMGILAFSLGLGSFEGIFASLLGLIAHALTKALMFMSSGSILVNLH 350 Query: 367 TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLL 426 T+ + + G+ KI+P TA G A+ G PPF +F+SEF+T+ + + +++L Sbjct: 351 TKSIKDIKGLFKILPITATFLAVGVFAITGAPPFLLFISEFLTLISAFKEGFIWQGIVVL 410 Query: 427 LLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRI 486 L L+L+ G + +L +P + + L PM IL+++++ +G IP + + Sbjct: 411 LALSLIFFGFIESFFGMLTREPTFEQKKEHMFMLI--PMGILVILIVGLGLFIPNDIKSL 468 Query: 487 LAGA 490 L A Sbjct: 469 LENA 472 >UniRef50_Q13II8 NADH dehydrogenase (Quinone) n=3 Tax=Proteobacteria RepID=Q13II8_BURXL Length = 486 Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 170/407 (41%), Positives = 253/407 (62%), Gaps = 4/407 (0%) Query: 12 LTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILA--LWVVQTAADAGEIFAAGLW 69 L PL+F++ FA L R V ++G + L A L VQT G +FA G Sbjct: 6 LVPLVFAIPLFAGATLALVGQRPVAPELNVGFSFLTFAAATLLAVQTETH-GSVFAPGKL 64 Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 +D L +A+ +G+ T I+S YMR E G+++ + Y+ + LF+F MLL Sbjct: 65 FFVDPLNVFLVALTAFVGWTTSIFSRPYMRIERDRGKMTGPRMRLYHSMYQLFIFAMLLA 124 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 + +NN+ ++W A+EA TL++ LV +Y +SLEAAWKY I+C VG+A LFGT+L+Y Sbjct: 125 LLTNNMGILWVAMEAATLATVLLVSVYRTAASLEAAWKYFILCGVGIAQALFGTILLYLA 184 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 A+ + + A+ W+ + LDPT+M LAFVFLLIG+GTK GL PMH WLPDAH+E Sbjct: 185 ASRQLGGTD-ALLWTSLDAVKGSLDPTIMSLAFVFLLIGYGTKVGLVPMHNWLPDAHAEG 243 Query: 250 PSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRD 309 P+P+SA+LS +LLN AL ++R ++ A+ + P LL+ FG++SV VA F + Q+D Sbjct: 244 PTPISAVLSGLLLNVALYAVLRCKVLADGALRNGLPGYLLVGFGLVSVLVATFSLFRQKD 303 Query: 310 IKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRD 369 +KRL +YSS+E+MGL+ G+GGP+ FA LLH+ HSL K+ +F G+ K GT+ Sbjct: 304 VKRLFSYSSIEHMGLMTFAFGLGGPIATFAGLLHMTVHSLVKSAIFFTVGHAAQKAGTQA 363 Query: 370 LNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 ++ + G+L++ P G LA+ GMPPF +F SEF+ +T +++ Sbjct: 364 IDDIRGLLRVSPTVGWGMMLGTLAILGMPPFGVFASEFLILTTAMSK 410 >UniRef50_B2V8R3 NADH dehydrogenase (Quinone) n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V8R3_SULSY Length = 484 Score = 308 bits (790), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 156/413 (37%), Positives = 256/413 (61%), Gaps = 3/413 (0%) Query: 40 SLGITLL-LILALWVVQTAADAGE-IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGY 97 +GIT + LIL ++ + + I+ L +D L + L ++ I F +YS+GY Sbjct: 27 QIGITFINLILGYSLISKINNPQDRIYELNSLLFLDSLNSILLLVILTISFFVSVYSVGY 86 Query: 98 MRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG 157 M+ E+ G +S + +YY + +LF+F ML+V SNN ++W AIE TTL++AFL+ Y Sbjct: 87 MKRELK-GGISEKKVNEYYFWMNLFIFAMLVVTLSNNFGILWIAIEGTTLATAFLISYYR 145 Query: 158 QRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTL 217 + ++EA WKYI++C++G+ LFG +L+Y ++ SV+ ++ W+ + SS L+P L Sbjct: 146 NKEAVEAGWKYIMLCSIGIGLALFGIILLYYSSFSVLGHGLQSLNWTNIYDVSSRLNPKL 205 Query: 218 MLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIIC 277 ++LAF+F+L+GFGTK G P+H WLPDAHS+AP+P+SAL+S VLLNCA ++R II Sbjct: 206 LMLAFIFVLVGFGTKVGFAPLHFWLPDAHSQAPTPISALMSGVLLNCAFYSILRVQAIIN 265 Query: 278 QAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGI 337 ++ L+ FG+L+V V+A FI+ Q D KRLLAYSS+E+M ++A + L I Sbjct: 266 NNGYGYNTSKYLMFFGVLTVVVSALFIIRQVDYKRLLAYSSMEHMAIIAFAFSVNTKLSI 325 Query: 338 FAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGM 397 FA + H++NH++ KT +F G++L + TRD+ + G+ K +P+T++ A+ G Sbjct: 326 FAGVYHLINHAIVKTSIFMTVGSILTSFHTRDIFSIRGLFKALPYTSIALILSMFAITGT 385 Query: 398 PPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ 450 PPF+IF+S+ + + ++ ++L+L L L+ G + +LM + Sbjct: 386 PPFSIFMSKLFILISSFKAGFIIPSIILMLALVLIFGGFIYHFLNMLMGDTDK 438 >UniRef50_Q21TA5 NADH dehydrogenase (Quinone) n=6 Tax=Bacteria RepID=Q21TA5_RHOFD Length = 484 Score = 301 bits (771), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 161/388 (41%), Positives = 237/388 (61%), Gaps = 3/388 (0%) Query: 30 SATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFL 89 S R + V+ SLG L + + AD G I ID L + + +G Sbjct: 25 SYARDINVVFSLGT--FLAACVLTAEIVAD-GPILVWHDQFFIDPLNVFLVTLTAFVGMT 81 Query: 90 TGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSS 149 T I+S YMR E HG+++P + Y+ + LF FTMLL T+NNL ++W A+EA TL++ Sbjct: 82 TAIFSRPYMRIEQDHGKMTPPRMRLYHSMYQLFSFTMLLGFTTNNLGILWVAMEAATLTT 141 Query: 150 AFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQ 209 LV +Y +SLEAAWKY I+C VG+A LFGTVL+Y A V+ + W+ + Sbjct: 142 VLLVSVYRTAASLEAAWKYFILCGVGIAQALFGTVLLYMAAEKVLGPEGATLLWTNLDAI 201 Query: 210 SSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVL 269 LDP+++ LAF FLLIG+GTK G+ P+H+WLPDAH+E P+PVSA+LS +LLN A+ L Sbjct: 202 KDQLDPSIITLAFAFLLIGYGTKVGMVPLHSWLPDAHAEGPTPVSAVLSGLLLNVAMYAL 261 Query: 270 IRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVEL 329 +R ++ A+ +L++ FG+LSV VA FF+ Q+D+KR+ +YSS+E+MGL+ Sbjct: 262 LRCKVLTDGALMRPLAGQLMMGFGLLSVVVATFFLSRQKDVKRMFSYSSIEHMGLITFAF 321 Query: 330 GIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGG 389 G+GGP+ FA LLH+ HSL K+ +F G+ K GT+ ++ + G++K+ P Sbjct: 322 GMGGPVANFAGLLHMTVHSLIKSAIFFAVGHATQKAGTQIMSEIRGLIKVNPTIGWGLIL 381 Query: 390 GALALAGMPPFNIFLSEFMTITAGLARN 417 G +A+ GMPPF +F SEF+ +T + Sbjct: 382 GVMAILGMPPFGVFASEFLILTTAMREQ 409 >UniRef50_D2LH97 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LH97_RHOVA Length = 478 Score = 295 bits (755), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 148/349 (42%), Positives = 228/349 (65%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 +D L F+ + ++GF T ++S Y+ HE+ G L+P+ + Y+ F + M L + Sbjct: 59 LDDLNKFFIILNTLVGFTTSLFSRSYIGHEIETGHLTPLFVRFYHAMFQGMMGAMNLALL 118 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAA 191 +NN+ +MW +E TL + +VGIY ++LEAAWKY I+ VG++ FGT+LVY Sbjct: 119 ANNIGLMWVGLEFATLMTVIMVGIYRTPAALEAAWKYFILGIVGISLAFFGTILVYLTGQ 178 Query: 192 SVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPS 251 V+ + E A+ WSE++K + LD L+ +AF+FLL+G+GTK GL P+HAWLPDAH+E P+ Sbjct: 179 GVLGEGEAAMTWSELIKIAPQLDAPLLNIAFIFLLVGYGTKVGLAPLHAWLPDAHAEGPT 238 Query: 252 PVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIK 311 P+SA+LS +LLN AL L+R+ ++I + P +L+ G++S+ AAF + ++DIK Sbjct: 239 PISAVLSGLLLNVALFALLRFKMLIAANPNALAPGPILITMGLVSLIFAAFMLYQRQDIK 298 Query: 312 RLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLN 371 RL AYSS+E+MGL+ G+GGPL FAALLH++ HSL K+ +F G+V GT++L+ Sbjct: 299 RLFAYSSIEHMGLITFAFGLGGPLLNFAALLHMVMHSLTKSAIFFAVGHVTQAKGTQELS 358 Query: 372 VVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 + G+ P +V G +A++G+PPF F+SEF+ +T+ AR LL Sbjct: 359 AIRGLSVSNPLLSVALAAGVIAISGLPPFGAFMSEFLILTSTFAREPLL 407 >UniRef50_Q2WAW3 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter n=47 Tax=Bacteria RepID=Q2WAW3_MAGSA Length = 496 Score = 293 bits (750), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 161/419 (38%), Positives = 249/419 (59%), Gaps = 4/419 (0%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L ID + + +G T ++S Y+ E LS + L Y+ + F FTMLL Sbjct: 67 LFIDDFNVYLVVLTAFVGLTTSVFSAAYIARESEAQRLSDLHLRFYHSMYQAFSFTMLLA 126 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 + +NN VMW A+EA TL++ +V +Y R ++EAAWKY I+C+VG+ LFGT LVY Sbjct: 127 LCANNTGVMWVAVEAATLTTVLMVSLYRTREAIEAAWKYFILCSVGIGLALFGTTLVYLA 186 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 A VM A+ W+ ++K++ P L+ LAFVF+L+G+GTK GL P+HAWLPDAH+E Sbjct: 187 AQPVMGDGADAMAWTLMIKRAHDFQPDLLNLAFVFVLVGYGTKVGLAPLHAWLPDAHAEG 246 Query: 250 PSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRD 309 P+P+SA+LS +LLN AL L+R+ ++I + P LL++ G+ S+ ++AF + + D Sbjct: 247 PTPISAVLSGLLLNVALYALLRFKMVIAANGNTLTPGPLLVVMGLSSLFLSAFMLYRRGD 306 Query: 310 IKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRD 369 IKRL AYSS+E+MG++ G+GG + FA LLH+ HSL K+ +F G + GT+ Sbjct: 307 IKRLFAYSSIEHMGVITFAFGMGGAVANFAGLLHMTMHSLTKSAIFFAVGIISQNLGTKR 366 Query: 370 LNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLL 429 + + G+ P F LA+AG+PP +F+SEF+ + + AR LL I L + LL Sbjct: 367 IAAIRGLTSSHPVLGWGFVLAVLAIAGLPPMGVFMSEFLVLGSTFARQPLLAIPLAVGLL 426 Query: 430 TLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTT----SPMVILLVMMLAMGTHIPQPVI 484 A + R+ + PP A G G L+T +P+ + ++++L G ++P+ ++ Sbjct: 427 LAFGALVARLQSMAFGEPPPHAHAHGHAGPLSTALALTPLWVHMLLVLVAGLYLPRELV 485 >UniRef50_B1ZSF1 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSF1_OPITP Length = 493 Score = 291 bits (746), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 179/444 (40%), Positives = 273/444 (61%), Gaps = 12/444 (2%) Query: 58 ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 A G + G +L D L + ++ ++ T +Y++GY R ++A G ++ ++Y Sbjct: 51 APGGAVTEWGGFLRADALSVWMVLLIAIVSLATSVYAVGYFRRDLAEGAVNEHRFREFYV 110 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVA 177 LF ML+VV +NNL VMW A+E T L+S LV +Y +++SLEAAWKY+++ VG+ Sbjct: 111 LTPLFATGMLVVVLANNLGVMWVAVEGTALASVLLVALYNRKTSLEAAWKYVMLGGVGLV 170 Query: 178 FGLFGTVLVYANAASVMPQAEMAIF-WSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLF 236 LFGT+ YA A A M F WS +L + LDP+L+ LAF+F+L+G+GTK GL Sbjct: 171 LALFGTIFTYAAAIDKTGGAVMPSFNWSSLLAIAPQLDPSLVTLAFIFVLVGYGTKAGLA 230 Query: 237 PMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 PMH WLPDAHSEAPSP SA+LS V L A+ L+R++I+ +G+ F R+LL FG+ S Sbjct: 231 PMHPWLPDAHSEAPSPTSAMLSGVSLKIAVYALLRFHILTTACLGTQFSGRMLLGFGLGS 290 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + +A FILVQ+++KR+LAYSS+E++GL+ V +G+ PL +F ALLH+ H+L K +LF Sbjct: 291 MLLAGPFILVQKNLKRMLAYSSLEHVGLICVAIGLNAPLAVFGALLHMGYHALTKPVLFF 350 Query: 357 GSGNVLLKYGTRDLNVVCGML-KIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLA 415 +GN+ T D + G L + MP TAV+ G GA+A+ G+PPF +F+SE I G Sbjct: 351 AAGNIHQHCHTLDFRRLGGGLGRNMPVTAVVLGVGAVAVCGLPPFGLFVSELTIIAGGFG 410 Query: 416 RNHLLIIVLLLLLLTLVLAGL-----VRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLV 470 L + V++++ LT+V G+ + + +P + V+ G L + P+V LLV Sbjct: 411 AQQLWVSVIVVVSLTVVFCGVLSRLSRLLLGPAVAGRPTEPVSPGRLA-VIGLPLVALLV 469 Query: 471 MMLAMGTHIPQPVIRILAGASTIV 494 + +P+PV ++ A+ I+ Sbjct: 470 FTV----WLPEPVFEVMNRAAAII 489 >UniRef50_A1RWL5 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL5_THEPD Length = 491 Score = 290 bits (741), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 159/428 (37%), Positives = 254/428 (59%), Gaps = 6/428 (1%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 +D L L L ++ + + +YS Y+ +EV G ++ + +Y + F+FTM+LVVT Sbjct: 65 VDSLTSLMLVVISFVSLMVSLYSPKYLAYEVERGVVAREKVVLFYVLLNAFIFTMILVVT 124 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAA 191 +NN+ +MW A+EATT+++A LV Y ++EA+WKYII+C+ G+AFGL+G V +Y A Sbjct: 125 TNNIAIMWVALEATTIATAHLVATYRTAEAIEASWKYIILCSTGIAFGLYGVVTLYYTA- 183 Query: 192 SVMPQAEMAIFWSEVLKQSSLLD--PTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 + + W+ ++ + +L+ T++ +AF L+GFGTK GL P H WLPD +SEA Sbjct: 184 -YLAGIPAPLLWTSLVDHAKMLEAHSTMVKIAFTLALVGFGTKAGLAPFHTWLPDTYSEA 242 Query: 250 PSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRD 309 P VSALL+++L CA+ L+R+Y + A F +LL+ G+ S+ +++ +L D Sbjct: 243 PPYVSALLASILEGCAIYTLVRFYSVSVLAGVGAFAQTVLLVVGIASLFISSLHMLAVTD 302 Query: 310 IKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRD 369 + RL A SSVE+MG++A LG GG LG AA+ H++NH+L K+ LF SG V L YGTR Sbjct: 303 VNRLFALSSVEHMGIIACALGFGGYLGALAAVFHVVNHALVKSALFLSSGLVTLSYGTRK 362 Query: 370 LNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLL 429 + + GM++ P L GA A+ G PPF F SE + I AG+ + +VL L + Sbjct: 363 IEGIRGMMRSYPALGALVLAGAYAIIGGPPFGTFQSELLAIMAGVKSGNPFALVLFLAAI 422 Query: 430 TLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAG 489 + A L+ ++ +P + + + +P+ ILL++ L +G +IP+P+ L Sbjct: 423 VVAFAALLVSCTNMVFGEPASSTEK--YPHILKAPITILLLLSLLLGVYIPEPLRSCLEN 480 Query: 490 ASTIVLSG 497 A ++ G Sbjct: 481 AGRSIVGG 488 >UniRef50_B5EKJ6 NADH dehydrogenase (Quinone) n=3 Tax=Acidithiobacillus RepID=B5EKJ6_ACIF5 Length = 484 Score = 281 bits (720), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 164/405 (40%), Positives = 241/405 (59%), Gaps = 3/405 (0%) Query: 90 TGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSS 149 T +S YM HE H LS + Y+ F FL TMLL + +NN+ ++W A+E TLS+ Sbjct: 81 TAWFSRNYMLHETVHWSLSRQRVRLYHAMFQTFLATMLLALLTNNMGILWVAMEGATLST 140 Query: 150 AFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQ 209 LV ++ LEAAWKY I+C VG+A LFGT+L+Y A +M A+ W+ + Sbjct: 141 VLLVSLFRTAEGLEAAWKYFILCGVGLAMALFGTILLYFAAQKIMGHGADALLWTHLAAV 200 Query: 210 SSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVL 269 L+P +M +AF+F+L+G+GTK GL P++ WLPDAH+ PS VSA+LS +LLN AL + Sbjct: 201 RHELEPQVMAIAFIFMLVGYGTKIGLTPLNNWLPDAHASGPSSVSAVLSGLLLNVALYAI 260 Query: 270 IRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVEL 329 +R +++ A+G DF + LL+ FG+LS+ VA F +L QRD+KRL AYSS+E+MGL Sbjct: 261 LRAKVLVDGALGRDFASHLLMGFGLLSLLVAGFSMLRQRDVKRLFAYSSIEHMGLATFAF 320 Query: 330 GIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGG 389 GIGGPL FA LLH+++HSL K+ +F G + G+R++ + GML+ P F Sbjct: 321 GIGGPLASFAGLLHMVSHSLTKSSVFFSIGQAVQDIGSREIQRIRGMLEFSPLLGWAFML 380 Query: 390 GALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP 449 L++ GMPP +FLSEF+ IT+ L L +LLL L RM V A Sbjct: 381 AVLSILGMPPSGLFLSEFLIITSTLQAQPWLTPLLLLGLGVAFAGIFPRMQGMVFGAHQE 440 Query: 450 QAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIV 494 + +G + P+ + L ++ +G IP +++ + A+ I+ Sbjct: 441 GVARQSVVGII---PVFVQLTLVAMLGVFIPLTLVQWMQHAAQIL 482 >UniRef50_C6HVM6 Putative hydrogenase-4 subunit (HyfF) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVM6_9BACT Length = 491 Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 162/432 (37%), Positives = 245/432 (56%), Gaps = 11/432 (2%) Query: 73 DGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTS 132 D LFL I G + T +S+ YM E +HG L+P Y + +F+ TM++V+ S Sbjct: 64 DTFSSLFLVITGGVAATTSFFSLRYMTIEASHGRLTPERTRLYLALYQIFVLTMIVVLAS 123 Query: 133 NNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAAS 192 NNL ++W A+E TL++ LVG ++++A+WKY I+C VG+A LFGT+L+Y + Sbjct: 124 NNLGLLWVALEGATLATVLLVGWTRTPAAIKASWKYFILCGVGIAQALFGTILLYFASEK 183 Query: 193 VMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSP 252 + A+ + + S L+PT+M LAFVF ++G+GTK GL P+H WLPDAH+E P+P Sbjct: 184 TLGPGGTALLLTHLETVKSQLEPTVMSLAFVFFMVGYGTKVGLVPLHNWLPDAHAEGPTP 243 Query: 253 VSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKR 312 +SA+LS +LLN AL ++R + AI S P+ LL+ FG+ SV +A+ + ++DIKR Sbjct: 244 ISAVLSGLLLNVALYAILRVKSLADGAIHSSMPSNLLMGFGLASVLLASISMWKRQDIKR 303 Query: 313 LLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNV 372 L AYSS+E+MGL + GIGGPL FA LLH+ HSL K+ +F G+++ G++ + Sbjct: 304 LFAYSSIEHMGLATLAFGIGGPLATFAGLLHMTTHSLVKSAIFFAVGHIVQTSGSQKIPS 363 Query: 373 VCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLV 432 + + P A G A+ G+PPF +F SE + IT + R + LLL L Sbjct: 364 IREVALRTPGLARALLAGGFAITGLPPFALFASELLIITEAVKRIPFAVPFLLLALFVTF 423 Query: 433 LAGLVRM-----AARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRIL 487 + R+ + KP + + LT P+ I L + L +GT P + + Sbjct: 424 GVLIFRILEISEGGPSMTTKPLPPLPK-----LTFFPIWIHLGLALILGTVFPATLYSVY 478 Query: 488 AGASTIVLSGTH 499 A +VL G H Sbjct: 479 QKA-LLVLGGPH 489 >UniRef50_C0QBF6 HyfF n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBF6_DESAH Length = 496 Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 181/503 (35%), Positives = 282/503 (56%), Gaps = 33/503 (6%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATR--TVTVLHSLGITLLLILALWVVQTAADAGE 62 +M L+LL P L+CF R R L V HSL L+ W +A Sbjct: 1 MMIWLILLVPAAAGLICFLSRSRSLCRYLLCVAAVFHSL-----LVGWQWFNHGSALQSA 55 Query: 63 IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPV---------TLC 113 W+ +D G LFL+I ++ + +Y+ GY++ E A G + Sbjct: 56 ------WIGLDDAGLLFLSITSLLFLGSSVYTFGYLKAE-AQGHRRDMEENILFKNSNDA 108 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICT 173 + G FL TM LV S +L +MW AIEATTLSSA L+ + SLEA WKY++IC+ Sbjct: 109 VFTGCLLFFLSTMSLVTVSRHLGLMWVAIEATTLSSAPLIYYHRHHRSLEAVWKYLLICS 168 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 +G+A + G + +++ + + ++ ++ L+PT + AFV L+G+GTK Sbjct: 169 IGIALAMLGNFFIVVAGSNINATGSL-LSLDTLMANATRLNPTWLKAAFVLCLVGYGTKM 227 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFG 293 GL PMH WLPDAHSEAPS VSALLS LLNCA LVL+R ++++ A RL +I G Sbjct: 228 GLAPMHNWLPDAHSEAPSSVSALLSGALLNCAFLVLLRIHVVMTAAGLGQTSGRLFMILG 287 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 ++S+ +AA FI+ Q+D KR+LAYSSVE+MG++A+ +G+GG +GI ++ H +NHSL K + Sbjct: 288 LISLVIAAIFIIGQKDFKRMLAYSSVEHMGIIALGIGVGG-IGISGSIFHAVNHSLIKGM 346 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 LF +GN++ Y T+D+ V G++ P TA+L+ G +A+ G PPF IFLSE + A Sbjct: 347 LFMTAGNLMTSYQTKDIAGVSGLIYTRPVTAILWLAGTVAIIGSPPFGIFLSELTILGAM 406 Query: 414 LARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDL-------GWLTTSPMV 466 + + + + LL L ++ A L ++ ++PP + + W + +P+ Sbjct: 407 VDKARYGVAAVYLLTLGIIFAALSAKVLPMVFSQPPGQTDPKNTSPTDPEPAW-SIAPLA 465 Query: 467 ILLVMMLAMGTHIPQPVIRILAG 489 + ++ L +G ++P + ++L G Sbjct: 466 VFGILSLILGIYMPPWLAKVLDG 488 >UniRef50_D2L9G9 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L9G9_9DELT Length = 491 Score = 262 bits (669), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 170/404 (42%), Positives = 238/404 (58%), Gaps = 22/404 (5%) Query: 65 AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH---- 120 A G L +D G LFLA+ V+ +Y+ GY+RHE G D F + Sbjct: 51 AYGGLLELDAPGQLFLALASVLFLAASVYAAGYLRHE---GAGPKRDFQDGAAFVNAPER 107 Query: 121 -------LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICT 173 FL M +V + NL V+W IEATTLSSA L+ + R SLEA WKY++IC+ Sbjct: 108 IFTMCLCFFLAAMTVVCATRNLSVLWVGIEATTLSSAPLIYFHRHRRSLEATWKYLVICS 167 Query: 174 VGVAFGLFGTVL---VYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 VG+A L G +L + + AS P A M + S +L +++L + AF+F+L+G+G Sbjct: 168 VGIALALLGNILFSVAFYDPAS--PLASMNL--SGMLPRAALAAKPWLRAAFIFVLVGYG 223 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 +K GL PMH WLPDAHS++PS VSALLS LLNCA L ++R ++C A F LL+ Sbjct: 224 SKMGLAPMHNWLPDAHSQSPSLVSALLSGALLNCAFLGILRANQVLCAADMGAFSGELLI 283 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 +FG++S+A AA F++ Q D KRLLAYSSVE+MG++A+ +G+GG F A+LH +NHSL Sbjct: 284 LFGLISMATAAVFVVGQGDYKRLLAYSSVEHMGILALGVGVGG-GAAFGAMLHAVNHSLT 342 Query: 351 KTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 K LF SGN+L Y TR + G+ + +P TA L+ G LA+ G PPF IF+SE + Sbjct: 343 KGALFLLSGNILAVYHTRSCHDARGVAQALPVTAALWMAGFLAICGSPPFGIFVSELTIL 402 Query: 411 TAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR 454 L H+ + L+LL ++ G+ AR++ P A R Sbjct: 403 KTMLTTGHVAAAIGYLVLLAVIFVGMSVPVARMVQGPLPPATAR 446 >UniRef50_A6UVJ7 NADH dehydrogenase (Quinone) n=1 Tax=Methanococcus aeolicus Nankai-3 RepID=A6UVJ7_META3 Length = 470 Score = 258 bits (658), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 142/382 (37%), Positives = 225/382 (58%), Gaps = 9/382 (2%) Query: 69 WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLL 128 ++ I LG + L I+ ++ + YSI Y ++ E Y F+ M L Sbjct: 55 YIFITPLGKIVLGIISLLFLMVSYYSIDYFKNSNYESE------HIYSSMLLFFVSAMSL 108 Query: 129 VVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 S+++I+ W AIEATT+SSA L+ ++ R S+ A WKYII C+VG++ L G+ ++ Sbjct: 109 TAISDHIILTWIAIEATTISSAPLIFLHKTRDSVMATWKYIITCSVGISLALLGSFIILQ 168 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 + P + +S ++ + ++P L+ FVF+LIG+GTK GL PMH WL DAH E Sbjct: 169 SFTQ--PIQVSGLLFSNLMAYTGTINPLWFLVGFVFILIGYGTKVGLAPMHIWLSDAHGE 226 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQR 308 APSP SALLS LLNCA L + + ++ + ++++ G+ SV VAA F+ Q+ Sbjct: 227 APSPASALLSGALLNCAFLPIYKINVLAGYLNLGEITGKMMIALGLFSVFVAAAFMPAQK 286 Query: 309 DIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTR 368 D KRLLAYSS+ENMG++ + GIGG + + ++ H++NHSL K LF +GN+LL+YGT+ Sbjct: 287 DYKRLLAYSSIENMGIIVLGAGIGG-IALLGSIFHMINHSLIKCALFLATGNMLLQYGTK 345 Query: 369 DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLL 428 D++ V K++P TA F GA+ ++G PPF +FLSE + I ++ + L ++ Sbjct: 346 DISKVKNFFKLLPKTAFAFTLGAIGISGFPPFGLFLSELLIIFGAFTGHYYAVGFLFIIA 405 Query: 429 LTLVLAGLVRMAARVLMAKPPQ 450 L LV+ G + ++ ++ + Sbjct: 406 LILVIVGFSKKIIQICYSESEE 427 >UniRef50_A5FW45 NADH dehydrogenase (Quinone) n=4 Tax=Proteobacteria RepID=A5FW45_ACICJ Length = 506 Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 175/451 (38%), Positives = 259/451 (57%), Gaps = 14/451 (3%) Query: 38 LHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGY 97 L + G+ + +A+ V AA A + G +L +D LG + V+ L I++ GY Sbjct: 34 LAAAGLCFIAAVAMTVSAPAAGARYL---GRYLIVDPLGAWIILCAAVVYLLASIHACGY 90 Query: 98 MRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG 157 MR GE + L +Y F LF T+ + NN + W AIE TT+ S FLV Sbjct: 91 MRMP---GEEA--RLPRFYQLFALFALTIFIAPLMNNPGLYWIAIEMTTVVSTFLVAFEQ 145 Query: 158 QRSSLEAAWKYIIICTVGVAFGLFGTVLVY-ANAASVMPQAEMAIFWSEVLKQSSLLDPT 216 ++EA WKYIII + G+ L GTV+ Y A S+ P +M W + + +D Sbjct: 146 AAEAIEAGWKYIIIVSAGITLALLGTVIFYWAGTFSLGPTYDMT--WRVLRHAAPHMDRA 203 Query: 217 LMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIII 276 L++L F+ +L+G+GTK GL PMH WLPDAHSE P+PVSA+LS LLN A+ ++RY ++ Sbjct: 204 LLVLGFLLVLVGYGTKVGLAPMHTWLPDAHSEGPAPVSAMLSGALLNAAMAGIVRYLAVL 263 Query: 277 CQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLG 336 +A P+++L +FG S+ VAA FI+ QR +KRL+AYSSVE+MG+VA+ G GGP G Sbjct: 264 HRAGLFMLPDQILAVFGTASLLVAALFIVRQRGVKRLMAYSSVEHMGIVALGFGFGGPFG 323 Query: 337 IFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAG 396 + A+ H+LNHSL K+L+F G+GN + +GTR + + + P A L+ GA+A+ G Sbjct: 324 VAGAMYHMLNHSLNKSLMFFGAGNAMRSFGTRSMTRIRDYARHFPVAAALWLAGAVAITG 383 Query: 397 MPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP--PQAVNR 454 PPF +F SE + AG L +++L+LL L+ G + RV+ +P A Sbjct: 384 APPFGLFASELTILRAGFRGAGLWAAIVMLVLLILIFIGFLDH-FRVMYFEPAGDDAPRP 442 Query: 455 GDLGWLTTSPMVILLVMMLAMGTHIPQPVIR 485 LG T +PM + L+ +L +G P+ + R Sbjct: 443 ARLGAWTVAPMWLALIPLLVLGLWWPRAMWR 473 >UniRef50_Q6APF1 Probable hydrogenase, component F-formate hydrogenlyase subunit 3 n=1 Tax=Desulfotalea psychrophila RepID=Q6APF1_DESPS Length = 475 Score = 249 bits (635), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 143/355 (40%), Positives = 217/355 (61%), Gaps = 13/355 (3%) Query: 92 IYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAF 151 IY+ Y+ E E P+ C LFL TM +V S++ IV+W A+EATTL SA Sbjct: 77 IYAFSYI--EETEVENKPLFNCC----MMLFLGTMSMVTLSDHPIVLWIAVEATTLVSAP 130 Query: 152 LVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSS 211 L+ I+ + +LEA WKY++IC+VG+A L G + + + + + ++ + + + Sbjct: 131 LIFIHRSQEALEATWKYVLICSVGIALALLGCFFITLSMD--LGNIDAPLTFNSLYQVAP 188 Query: 212 LLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIR 271 LDP + F+F++IGFGTK GL PMH WLPDAHS+APSP SALLS LLNCA L + + Sbjct: 189 QLDPLWLKTGFIFVVIGFGTKMGLAPMHTWLPDAHSQAPSPASALLSGALLNCAFLGIYK 248 Query: 272 YYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGI 331 ++++ A F +L+ FG+ S+ V A FI+ Q D KR+LAYSS++NMG++A +GI Sbjct: 249 VHVLMTMAGLGGFSGNVLVGFGLFSMFVGAIFIISQPDYKRMLAYSSIKNMGVIAFGVGI 308 Query: 332 GGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGA 391 GG ++ A LHIL+HSL K+ LF +GNVLL + ++ + + G+++ +P T + G Sbjct: 309 GG-FAVYGAFLHILHHSLIKSSLFLSAGNVLLGFDSKKVQKIGGVVRHLPKTFISLFAGF 367 Query: 392 LALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA 446 + ++G+PPF +F+SE + L L L L +TLV AG + R+ M+ Sbjct: 368 VGISGLPPFGLFISEVIITIGALQNGRYLPAGLFLFAITLVCAG----SGRIFMS 418 >UniRef50_Q2RXM0 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM0_RHORT Length = 531 Score = 248 bits (634), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 155/385 (40%), Positives = 231/385 (60%), Gaps = 12/385 (3%) Query: 58 ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 A++G++FA G W H D L + ++ +G ++SIGY+RHEV G+ S L Y+ Sbjct: 55 AESGDLFALGGWFHADALSAVVAIVVTFVGLAATLFSIGYLRHEVEAGQYSQTRLPVYFV 114 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVA 177 +F+ TM V +NN+I+M+ +EATTL+SA LV Y + + EA +KY+++C+VG+ Sbjct: 115 LNSVFIATMAAVTVTNNVIMMYVVVEATTLASALLVTYYRKPGAWEAGYKYLLLCSVGIT 174 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 GL G V++Y+ A ++ A+ SE+ + L PT +++ V ++IGFG+K GL P Sbjct: 175 MGLLGCVILYSAAVPLL-GGHRAMQISELATVADQLPPTAVVVGCVLIIIGFGSKAGLIP 233 Query: 238 MHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFG---M 294 HAWLPDAHS++PSPVSALLS V L A+ + R + G+ ++ G M Sbjct: 234 FHAWLPDAHSQSPSPVSALLSGVTLKVAIYAIARIASLFYAGHGA--LGVFCIVLGAITM 291 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLL 354 L +AAF Q D+KRLLAYSSV +G + + LGIG LG + A+ H++NH+L K +L Sbjct: 292 LGGIIAAF---SQTDLKRLLAYSSVSQVGYIIMGLGIGSYLGFYGAVYHLMNHALDKAML 348 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 F +G +L GT + + G K P A+ F GALA++G+PP N F S+F TA Sbjct: 349 FLCTGLLLYSCGTTSIEEL-GKRKHSPLVALCFFIGALAISGVPPLNGFWSKFAIYTAA- 406 Query: 415 ARNHLLIIVLLLLLLTLV-LAGLVR 438 A HL + + LL +L+ +A LVR Sbjct: 407 AEAHLWWALGVALLTSLITIAVLVR 431 >UniRef50_B8IYV6 NADH dehydrogenase (Quinone) n=3 Tax=Desulfovibrio RepID=B8IYV6_DESDA Length = 497 Score = 234 bits (597), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 166/417 (39%), Positives = 232/417 (55%), Gaps = 21/417 (5%) Query: 49 LALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 LA W A E A G L D LG LFL + ++ +Y++ Y+R E + G + Sbjct: 38 LAAWTTWNVASGAEPEALGGLLAPDPLGALFLMLASLLFLAASVYAVYYLREEESLGVHT 97 Query: 109 PVTLCDYYGFFH-----------LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG 157 D F + FL +M LV T+ +L +W IEATTLSSA L+ + Sbjct: 98 --AFQDGRSFTNAPQRRLAACLCFFLASMTLVTTTPHLGALWVGIEATTLSSAPLIYFHR 155 Query: 158 QRSSLEAAWKYIIICTVGVAFGLFGTVLVY-----ANAASVMPQAEMAIFWSEVLKQSSL 212 + SLEA WKY+IIC+VG+A + G +L+ M + + W + + Sbjct: 156 HQRSLEATWKYLIICSVGIALAMVGNILLSVAFYTPEGMEAMVEGMNQVGW--YVSHARA 213 Query: 213 LDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRY 272 + T + AF+FLL+G+GTK GL P+H WLPDAHS+APS VSALLS LLNCA+L ++R Sbjct: 214 GEETWLKAAFIFLLVGYGTKMGLAPLHNWLPDAHSQAPSLVSALLSGALLNCAMLGILRG 273 Query: 273 YIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG 332 + I+ A F + LL FG+LS+ AA FI+ Q KR+LAYSSVE+MG++A+ +G+G Sbjct: 274 HQIMLAAGLGGFSSGLLSFFGLLSLITAAIFIVGQGHYKRMLAYSSVEHMGILALGVGVG 333 Query: 333 GPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGAL 392 G L + A+LH + HSL K +LF SGN+L +Y T + GM MP T L+ G L Sbjct: 334 G-LAVSGAMLHAVCHSLTKCMLFLLSGNILARYHTFSSYDIRGMRWTMPVTGALWMAGFL 392 Query: 393 ALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP 449 A+AG PPF IF+SEF+ LA + LL L ++ GL R++ P Sbjct: 393 AVAGSPPFGIFISEFIIFKGMLAAGSPFLAAAYLLALAVIFVGLSVAVLRMVQGSRP 449 >UniRef50_C1XWY6 Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XWY6_9DEIN Length = 483 Score = 231 bits (589), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 158/387 (40%), Positives = 220/387 (56%), Gaps = 19/387 (4%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L +DG+G +L + + L +Y+ Y + GE +Y +LFLF M Sbjct: 51 LRLDGVGLFYLLLTDCLFALVALYARAYFQ-AAQDGEA-----WRFYAAGNLFLFAMHGA 104 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 ++NL ++W +E++TL+SA LV G +LEA WKY+++ +VG+A GL G +LVYA Sbjct: 105 YLAHNLGLLWIFVESSTLASALLVYHRGGARALEATWKYLMLGSVGIALGLIGVILVYAL 164 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 + W E + +P + LAF FLL+GFGTK GLFP+HAWLPDAHSEA Sbjct: 165 LGGA------TLDWQEARELVRKAEPAQLKLAFAFLLVGFGTKVGLFPLHAWLPDAHSEA 218 Query: 250 PSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRD 309 PSP SALLS LLN A L+RY ++ A DF LL FG+ S+ AA F+ QRD Sbjct: 219 PSPASALLSGTLLNVAFYALLRYTALLGSAGLFDFAAGLLQGFGLFSLLAAALFLFAQRD 278 Query: 310 IKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRD 369 KRLLAYSS+E+MGL L +G P + A+LH L HSL KT F +GN+LL Y ++ Sbjct: 279 YKRLLAYSSMEHMGLAVYGLSLGVP---WLAMLHTLFHSLIKTAAFLSAGNLLLAYQSKL 335 Query: 370 LNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLL 429 + V + + P +A L L+LAG+PPF +F +EF L R+ L + L LL L Sbjct: 336 IARVGAVYRAWPASAGLLVLSWLSLAGLPPFGLFYTEFQA----LFRSSPLSMGLYLLGL 391 Query: 430 TLVLAGLVRMAARVLMAKPPQAVNRGD 456 AGL+ +R+ + P + G+ Sbjct: 392 VGAFAGLLWPLSRMAFGEGPLLPHSGE 418 >UniRef50_A0LSU2 NADH dehydrogenase (Quinone) n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSU2_ACIC1 Length = 512 Score = 231 bits (588), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 150/372 (40%), Positives = 219/372 (58%), Gaps = 6/372 (1%) Query: 65 AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLF 124 AAG +L +D + +FL ++ +Y+IGY+R E L +LF + Sbjct: 55 AAG-FLRVDAVSTIFLLATALVYATVALYAIGYLRPEHVDRRYCRRILAG----INLFAW 109 Query: 125 TMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTV 184 +L N ++W A+E TT+ SA LV I ++ EAAWKY++I + G+ LFGTV Sbjct: 110 ALLAAPMVNGFTLLWVAVELTTVISALLVAIDDTDAATEAAWKYVLIASAGLGLALFGTV 169 Query: 185 LVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 Y + V+ + F + S+ L T + L FV ++GFGTK G FP+H WLPD Sbjct: 170 FYYYAGSQVLGTSYTFTF-DALTMHSAGLPHTAVRLGFVLAVLGFGTKVGFFPVHTWLPD 228 Query: 245 AHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFI 304 AHSEAP+PVSALLS LL + ++R+Y + +G+ FP ++LL FG+ S+A+AA ++ Sbjct: 229 AHSEAPTPVSALLSGSLLAVSFYAILRFYQVAVATLGAAFPRQVLLAFGIASLALAALYL 288 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK 364 L QRDIKRLLAYSS+E+MG++AV + G + + LLH+L H+ AK F G+G + Sbjct: 289 LDQRDIKRLLAYSSIEHMGILAVGMSFGARIAVVGVLLHVLAHAAAKGNAFMGAGVFVRA 348 Query: 365 YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVL 424 +GT+DL + ++P++A LF LALA PPF IF SEF + GLA H + + Sbjct: 349 FGTKDLTAMRRGFTVLPWSAPLFLLAILALAAAPPFGIFRSEFYIVAGGLAAGHSGTVAV 408 Query: 425 LLLLLTLVLAGL 436 L+ L+ L AGL Sbjct: 409 LVALVILAFAGL 420 >UniRef50_A0QMU0 Hydrogenase-4, F subunit, putative n=6 Tax=Mycobacterium RepID=A0QMU0_MYCA1 Length = 489 Score = 226 bits (577), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 155/384 (40%), Positives = 219/384 (57%) Query: 62 EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 + F G L +D L L ++G++G L SIGY+ E A G Y Sbjct: 54 QYFVLGGLLRVDALCVTMLIVIGIVGTLATWASIGYIDAECADGHTDAGGARLYGALTPA 113 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLF 181 FL M++ V +NN+ V+W AIEATT+ +AFLVG R++LEA WKY+IIC+VG+A Sbjct: 114 FLAAMVVAVCANNIGVIWVAIEATTVITAFLVGHRRTRTALEATWKYVIICSVGIAIAFL 173 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 GTVL+Y A A +A+ + + LDP + LA LLIG+G K GL P H W Sbjct: 174 GTVLLYFAARHAGASAALALNLDVLGAHAHTLDPAVSRLAGGLLLIGYGAKAGLAPFHTW 233 Query: 242 LPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 L DAHS+AP+PVSAL+S VLL+ A+ VLIR I+ A G F LL G++++ VAA Sbjct: 234 LADAHSQAPAPVSALMSGVLLSVAMSVLIRITPIVGAAAGPTFLRAGLLTVGLVTLFVAA 293 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 + V D+KR+LAYSS+ENMGL+A+ G L I A LLH+L H + KT+LF G + Sbjct: 294 LMLTVTGDVKRMLAYSSMENMGLIAIAAAAGTTLAIAALLLHVLAHGVGKTVLFLAGGQL 353 Query: 362 LLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLI 421 +G+ + + G+++ F G + L G+PPF +F SE A + Sbjct: 354 QAAHGSTAIADITGVVQRSHLIGGSFAVGLIVLLGLPPFAMFASELALAHALADARLAWV 413 Query: 422 IVLLLLLLTLVLAGLVRMAARVLM 445 + +LL+ + A LVR A+R+L+ Sbjct: 414 LGAAMLLIAIAFAALVRNASRMLL 437 >UniRef50_A1SQ78 NADH dehydrogenase (Quinone) n=1 Tax=Nocardioides sp. JS614 RepID=A1SQ78_NOCSJ Length = 428 Score = 221 bits (564), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 147/365 (40%), Positives = 214/365 (58%), Gaps = 20/365 (5%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD--YYGFFHLFLFTML 127 L +D L L ++G +G A G L P+ D Y LFL M Sbjct: 15 LRVDALSAFMLTVIGSVGL------------TAAWGALDPLRPRDHVYSVLALLFLGAMS 62 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVY 187 L V ++NL V+W A+EATT+++AF+VG + R ++EAAWKY+++ +VGVA G VL+Y Sbjct: 63 LAVLADNLGVLWIAVEATTIATAFMVGHHRTRRAIEAAWKYVVLGSVGVAIAFLGIVLLY 122 Query: 188 ANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHS 247 A S E + WS + LDP+++ +A ++GF TK GL PMH+WLPDAHS Sbjct: 123 AATRS---AGEPTLSWSVLATTHPDLDPSVVRVAAALAILGFATKAGLAPMHSWLPDAHS 179 Query: 248 EAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQ 307 +AP+PVS L+S VLL A ++R I IG+ LL+ G+LS+ +AA ++ Q Sbjct: 180 QAPAPVSGLMSGVLLAVAFYAILRVQAIATPVIGTGLMRGLLVTAGLLSLTLAALLVIRQ 239 Query: 308 RDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGT 367 RD+KR+LAYSS+E+MGL+A+ GG L I ALLH+L H LAK+ F SG +L GT Sbjct: 240 RDLKRMLAYSSIEHMGLLALAAAAGGRLAIAGALLHVLGHGLAKSSTFVASGRILAAEGT 299 Query: 368 RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN---HLLIIVL 424 + + G++ P AV F G +AL G+PPF++F SE + G+ + + + VL Sbjct: 300 TTMADIHGLVARRPGVAVPFLVGVVALLGLPPFSLFFSEVAIVVGGVQQGLGWAMAVAVL 359 Query: 425 LLLLL 429 +LL++ Sbjct: 360 MLLVM 364 >UniRef50_B3E6C2 NADH dehydrogenase (Quinone) n=14 Tax=Deltaproteobacteria RepID=B3E6C2_GEOLS Length = 479 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 156/465 (33%), Positives = 262/465 (56%), Gaps = 44/465 (9%) Query: 47 LILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYM--RHEVAH 104 L L+L+++ T + I G WL +D LG + L + + + +Y +GY+ R E ++ Sbjct: 38 LALSLYLIATPS----IKVPGSWLWLDPLGKITLLAVSALFAVCAVYGVGYLAYRQERSN 93 Query: 105 -----------GELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLV 153 +S VTLC + G ++W A+E TT+S A L+ Sbjct: 94 RVLCLGLLVCLAAMSLVTLCQHLG-------------------LLWVAVETTTVSMAPLI 134 Query: 154 GIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLL 213 S+EA WKY++IC+VG+A L L++ A+ + + + S++L+ + LL Sbjct: 135 YFNRNARSIEATWKYLLICSVGIALAL--LGLLFLAYATHVAHQDATLLLSDLLEDARLL 192 Query: 214 DPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYY 273 + + AF+FLL+G+G+K GL P+H W PDA+ EAP V ALL+ L+NCA L ++R Y Sbjct: 193 NRGWLHAAFIFLLVGYGSKLGLAPLHTWKPDAYGEAPGLVGALLAGGLVNCAFLAILRIY 252 Query: 274 IIICQAIGSD--FPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGI 331 I C A ++ F ++L++ G+LS+AVAA F+ Q D KR+LAYSSVE++G++A+ LGI Sbjct: 253 QI-CLASVTELLFFQQVLVVLGLLSMAVAAVFMARQHDFKRMLAYSSVEHVGILAIGLGI 311 Query: 332 GGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGA 391 G +F L H++N+ L K +LF SGN+ YG + VV G L +P++ LF G Sbjct: 312 GKG-ALFGVLFHLINNGLTKGVLFLSSGNIHRSYGGKTTEVVQGALTRLPWSGGLFLAGF 370 Query: 392 LALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA 451 +A+ G PPF+ F+SEF I++ + L+ L LL L ++ G+ ++M +P Sbjct: 371 IAITGSPPFSPFISEFSIISSIFVQRQYLVGGLFLLFLAVIFIGMALTVLPMVMGRPRTD 430 Query: 452 VNRGDL--GWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIV 494 + + D LT P +++L++++ +G P+ ++++L + ++ Sbjct: 431 LGKSDYRDQLLTVGPPLVMLLVIVWLGVWPPEALLQLLKDGAAML 475 >UniRef50_D2BJP8 Hydrogenase subunit, NADH dehydrogenase subunit N-like protein n=5 Tax=Dehalococcoides RepID=D2BJP8_DEHSV Length = 499 Score = 206 bits (525), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 128/359 (35%), Positives = 209/359 (58%), Gaps = 5/359 (1%) Query: 49 LALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 L+LWV+ A F +L ID LG + I V+ L +YS GY+ H +++ EL Sbjct: 55 LSLWVL-LALPLPHYFMESRYLFIDRLGIFQVLIASVVFILAALYSRGYVSHLISNKELD 113 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKY 168 L +Y F+L L + +NNL + W +E +TL SA L+ R +L AA KY Sbjct: 114 TENLPVFYLGFNLILAVITFAFFANNLALFWLFLELSTLLSALLIATLNARDNLVAALKY 173 Query: 169 IIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIG 228 I I + + F G +++++ V + W E+ + LL P+++ L+ + +L G Sbjct: 174 IFIASTAMIFAFIGLIILFSLTRQVSGTGTLN--WDELAGLAPLLSPSVLGLSALLILTG 231 Query: 229 FGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQA-IGSDFPNR 287 K+GL P+H WLP A+++APS V+AL+SA +LN ++ ++R ++CQ+ IG F N Sbjct: 232 LLAKSGLVPLHNWLPAAYAKAPSVVTALMSATVLNIGIVGILRLSALLCQSQIGETFSN- 290 Query: 288 LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNH 347 +L+ G+LS+ VAAF +L +R++K+L+ +SS+E+MG++ + +GIG PL +F L H L H Sbjct: 291 VLIGLGILSIGVAAFSMLSRRNLKKLIGFSSIEHMGIMLLAIGIGTPLAVFWMLFHTLAH 350 Query: 348 SLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 SL K+ LF +G + +YG+ + + + ++ P A G+ A+ GMP F +FLSE Sbjct: 351 SLVKSGLFFSAGIIRRQYGSDRFDRIFDIFRLQPVAAWGVIIGSAAITGMPLFPVFLSE 409 >UniRef50_C6PUG4 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG4_9CLOT Length = 297 Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 103/241 (42%), Positives = 160/241 (66%), Gaps = 5/241 (2%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 ++ID L + L ++ I + +YS Y+ E+ +G +S YY F+LF+ +M+ V Sbjct: 61 IYIDSLNIIQLILISTISLVAALYSHKYIGEEIHNGSISINFAKIYYFLFNLFVLSMIAV 120 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVL-VYA 188 SNN+I+MW ++EATTLS+AFL+G + SLEAAWKYIIIC++G+ GL G +L +Y+ Sbjct: 121 AISNNIILMWISLEATTLSTAFLIGFNRHKLSLEAAWKYIIICSIGIVLGLIGIILFIYS 180 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 + + + W+ ++K SLL+ +++ F F+ +G TK GL PMH WLPDAHSE Sbjct: 181 SG----DPSNKVLNWTYLVKNYSLLNKSIVKFGFCFIFVGIATKAGLAPMHTWLPDAHSE 236 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQR 308 APSP+SA++S VLLN AL V++R+YII+ G + L ++FG++S+ ++AF IL Q+ Sbjct: 237 APSPISAMMSGVLLNLALYVVLRFYIIVKLISGLEKMKYLFIVFGLISLIISAFSILNQK 296 Query: 309 D 309 + Sbjct: 297 N 297 >UniRef50_C5CEV1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEV1_KOSOT Length = 492 Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 133/415 (32%), Positives = 212/415 (51%), Gaps = 24/415 (5%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 ID L + ++ + L+ IYS+GYMR + +YY L + + V Sbjct: 74 IDYLSAFLVTMVSALAVLSTIYSVGYMRKFSG--------IWNYYALLMLMITGLNGVAI 125 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAA 191 + +L ++ +E +++ LV +G+ EAA+KY I+ ++ + LFG VY+ + Sbjct: 126 TGDLFNLFVFMEIALIATYALVAFHGEAEHYEAAFKYAIMSSLSSSLVLFGIGCVYSMTS 185 Query: 192 SVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPS 251 S+ M I + ++ L + L GFG K +FP H+WLPDAH APS Sbjct: 186 SL---TLMQI-------SNKMIGVGETNLVYALFLTGFGLKAAMFPFHSWLPDAHPSAPS 235 Query: 252 PVSALLSAVLLNC-ALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDI 310 PVSA+LS VL+ LIR + ++ S+ L LIFG LS+ + A ++Q+DI Sbjct: 236 PVSAMLSGVLIKVLGAYTLIRVFYMVFGV--SELVKELFLIFGTLSMVIGALVAVMQKDI 293 Query: 311 KRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDL 370 KR+L +SSV MG + LGIG PLG+ A+ H+LNH++ K LLF +G V L GTRD+ Sbjct: 294 KRMLGFSSVSQMGYIIFALGIGTPLGVLGAIYHMLNHAVLKGLLFMDAGAVELIEGTRDM 353 Query: 371 NVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLT 430 + G+ + L +L ++G+PPF F S+ + ITA + + ++ L + Sbjct: 354 EEMKGVSDRTTYVTSLM--ASLGISGVPPFGGFFSKLIIITAAIYTGKFIYAIIALAVSV 411 Query: 431 LVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIR 485 + L + M + + + ++G L PM+IL V+ LA PV+R Sbjct: 412 ITLGYYLGMLKKAFRKRNKEVNDKGSLPASLKIPMIILAVLTLATALFY-VPVVR 465 >UniRef50_A7I7D1 NADH dehydrogenase (Quinone) n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I7D1_METB6 Length = 494 Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 116/343 (33%), Positives = 193/343 (56%), Gaps = 6/343 (1%) Query: 69 WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLL 128 + ID LG L + + I L +Y+ GY+ + + EL +L +Y + L ++L Sbjct: 61 YFFIDHLGLLEVLVATFIFVLAAVYARGYVGNLLISHELEAGSLKLFYAAWCLLELVIVL 120 Query: 129 VVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 S+NL + W E TT+ SA LV I + +++AA KYI + +V + F G + +Y Sbjct: 121 AFFSDNLALFWIFAEMTTVISAMLVAILSAKENIDAALKYIFVASVAMIFAFVGLIFLYE 180 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 S + + W+ ++ +S+L + AF+F+ IGF K+G+FP H WLP+AH++ Sbjct: 181 ITRSALGTGTLN--WTVLIAHASVLPAGMTTAAFLFVFIGFAAKSGIFPFHTWLPEAHAK 238 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQR 308 APS VSA+LS VLLN + +IR + I Q + ++L+FG+ ++A+AAF +L ++ Sbjct: 239 APSAVSAVLSGVLLNVGIYGIIRVFAIAHQTAAAAIVVPVILVFGIFTIAIAAFSMLPEK 298 Query: 309 DIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY--- 365 ++K+L+A+SS+ENMGL+ + + PL IF L+ ++ H+L K LF +G + +Y Sbjct: 299 NLKKLVAFSSIENMGLMLTGIAVATPLAIFWVLVQVIAHALTKASLFFSAGILHRQYRNH 358 Query: 366 -GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 + + + + P A G LA+ GMPPF F S+F Sbjct: 359 LSADAPDDIHDVFRFQPLAAWGIVLGGLAIIGMPPFLAFFSKF 401 >UniRef50_D1A6C9 NADH/Ubiquinone/plastoquinone (Complex I) n=13 Tax=Actinomycetales RepID=D1A6C9_THECD Length = 572 Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 132/278 (47%), Positives = 182/278 (65%), Gaps = 5/278 (1%) Query: 137 VMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQ 196 V+W A+EATT+ +AFLVG R+++EAAWKY+++C+ G+A L G VL++ AA Q Sbjct: 119 VLWVAVEATTIVTAFLVGHRRTRAAVEAAWKYVVVCSAGIALALLGVVLLHFAAA----Q 174 Query: 197 AEMAIFWSEVLK-QSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSA 255 A + +VL ++ LDP + +A LL+GFGTK GL PMHAWLPDAHS+AP+PVSA Sbjct: 175 AGVESLELDVLAAHAADLDPGVARIAVALLLLGFGTKAGLAPMHAWLPDAHSQAPAPVSA 234 Query: 256 LLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLA 315 L+S VLL+ A ++R +I A+G F LLL+ +LS+ VAA ++ QRD KR+LA Sbjct: 235 LMSGVLLSVAFYAMLRVKVIADPALGPAFTRNLLLVLALLSLLVAALLLIAQRDYKRMLA 294 Query: 316 YSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCG 375 YSS+E+MGL+A+ GG L + A LLH+L H L K++LF GSG +L G+ + V G Sbjct: 295 YSSIEHMGLLALGAAAGGRLALTAVLLHVLGHGLGKSVLFIGSGTILHATGSSRVAAVRG 354 Query: 376 MLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 +L P FG LAL G+PPF++F SE AG Sbjct: 355 LLARSPLLGGAFGLALLALLGLPPFSLFASELGIFRAG 392 >UniRef50_Q8THY7 Hydrogenase-3 subunit (EchA-like protein) n=2 Tax=Methanosarcina RepID=Q8THY7_METAC Length = 516 Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 121/364 (33%), Positives = 207/364 (56%), Gaps = 5/364 (1%) Query: 67 GLWLHIDGLGGLFLAILGVIGF-LTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFT 125 G L++D L +++ ++ +GF Y+ GY + GEL P L +Y F+L L T Sbjct: 54 GETLYLDHLN-IYVELITALGFSAAAFYARGYTDSLMEAGELDPKNLKTFYLAFNLLLIT 112 Query: 126 MLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVL 185 + + S+NL + W E TT+ +A LV I R +++AA KY+ I + + F G + Sbjct: 113 ATVALFSDNLALFWIFAELTTVCAAMLVAILSARENIDAALKYVFIVSGSMLFAFLGLIF 172 Query: 186 VYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDA 245 ++ + + E + W+E+ +S P L+L +F F+ IGFG K G+ P H WLPDA Sbjct: 173 LFTLSEQAL--GEGTLDWTELAVHASEFSPALLLASFSFMFIGFGAKAGVAPFHTWLPDA 230 Query: 246 HSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFIL 305 ++ APS VSA+LS ++ N + +IR Y ++ + + + +L+ G+ S+A+A+F + Sbjct: 231 YARAPS-VSAILSGLMQNLGIYGIIRIYALLKENGAASQASLILIAAGVFSIALASFSMF 289 Query: 306 VQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY 365 QR++KRL+A+SSVE+MGL+ + +GIG PL +F L ++L H L K L +G + +Y Sbjct: 290 QQRNLKRLIAFSSVEHMGLLLIGIGIGTPLALFWTLFYMLVHVLVKETLLFSAGILHRQY 349 Query: 366 GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLL 425 + + + K+ P A G++A+ GMPPF +F ++F + + L + +L Sbjct: 350 RSNMREDMKDVFKLQPRAAWGLILGSIAIIGMPPFPLFPAKFFILLESAEISPYLTLAVL 409 Query: 426 LLLL 429 L+L+ Sbjct: 410 LMLI 413 >UniRef50_Q6APE8 Probable hydrogenase, component B-formate hydrogenlyase subunit 3 n=1 Tax=Desulfotalea psychrophila RepID=Q6APE8_DESPS Length = 652 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 143/452 (31%), Positives = 224/452 (49%), Gaps = 50/452 (11%) Query: 69 WLHI-------DGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 WLH+ D L FL + V+ L +YS YM G + ++ FF+L Sbjct: 64 WLHLFTLSFSLDALSAFFLIPIFVVCPLAALYSYHYMDKIEEKGRIG----VSFF-FFNL 118 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLV-GIYGQRSSLEAAWKYIIICTVGVAFGL 180 L +M LV ++N+I E +LSS FLV Y + + A + Y + G F + Sbjct: 119 LLISMALVTAADNIISFLLVWELMSLSSFFLVIHDYQEEDTRRAGYIYFVFAQAGAMFII 178 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 L Y+ + A F + L + L+ F L+GFG+K G+FP+H Sbjct: 179 AALALAYSQTG----IHDFAAF--------ATLPAHIKLIVFFLALVGFGSKAGIFPLHM 226 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 WLP AH AP +SA++S V++ + +IR Y+ + S + +L GM+S + Sbjct: 227 WLPHAHPAAPCHISAIMSGVMIKMGIYGIIRLYVELEDT--SLIIGQTVLTLGMISGILG 284 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSL 349 + L ++DIK++LAYSSVEN+G++ + GIG G LLH+LNHSL Sbjct: 285 VVYALGKQDIKKVLAYSSVENIGVILIGAGIGMMGMSTGNMVMASFGFAGCLLHVLNHSL 344 Query: 350 AKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 KTLLF G+G ++ K GTR L+ + G++K +P T F G+++++G+PPFN F+SEF+ Sbjct: 345 FKTLLFLGAGAIVQKTGTRRLDELGGLIKRLPLTGKSFLAGSVSISGLPPFNGFISEFLI 404 Query: 410 ITA---GLARNHLLIIVLLLLLLTLVLAG------LVRMAARVLMAKPP--QAVNRGDLG 458 GL+ + +L +L L + G RM + + +P +A + G Sbjct: 405 YYGAFHGLSLKGSAFLFAMLSILALAIIGGLAASCFTRMMGIIFLGEPRTAKAAKATEAG 464 Query: 459 WLTTSPMVILLVMMLAMGTHIPQPVIRILAGA 490 + T PM+ L L +G P P + I+ A Sbjct: 465 FTMTLPMIFLAASCLFIGL-FPAPFVGIVFSA 495 >UniRef50_Q609T5 Hydrogenase subunit n=1 Tax=Methylococcus capsulatus RepID=Q609T5_METCA Length = 748 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 148/417 (35%), Positives = 214/417 (51%), Gaps = 61/417 (14%) Query: 26 KRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLH----IDGLGGLFLA 81 +R + A T + + SLG LL + A AA +G++ WLH +D L FL Sbjct: 105 RRMVFALLTASGVSSLGAGLLQLHA-----DAAVSGQLPFGLPWLHWHVRLDTLSAFFLV 159 Query: 82 ILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFT------MLLVVTSNNL 135 +LG+ G+Y GY R Y F L LFT M V+ +++ Sbjct: 160 VLGLGVIAAGVYGPGYTRQ-----------FAGQYSFGALGLFTGSFVAGMEGVLIADDA 208 Query: 136 IVMWAAIEATTLSSAFLVGIYGQR--SSLEAAWKYIIICTVG-----VAFGLFGTVLVYA 188 + A EA T+SS FLV +Y S AA+ Y+++ VG +AFG+ ++ Sbjct: 209 YLFVIAWEAMTVSSYFLV-VYQHEHASHRRAAFLYLLMGEVGAIAIILAFGILAAA-SHS 266 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 A A + W AF+ L GFG K GL P+HAWLP+AH Sbjct: 267 FAFDAWRDAHVTPAWGTA--------------AFLLALAGFGMKAGLVPLHAWLPEAHPA 312 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQR 308 AP+ VS L+S V+L A+ L+R+ + + + ++L G S A+ + +VQ Sbjct: 313 APAHVSGLMSGVMLKIAVYGLLRFAFDLLGDV-QWYWGAIVLGLGTGSAALGILYAVVQS 371 Query: 309 DIKRLLAYSSVENMGLVAVELG-----IG------GPLGIFAALLHILNHSLAKTLLFCG 357 D+KRLLAYSS+ENMG+V + LG IG G +G+ AAL H+LNHSL K LLF Sbjct: 372 DLKRLLAYSSIENMGIVFMGLGLCMVFIGKGHVQLGLIGLVAALYHVLNHSLFKNLLFLA 431 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 +G+V+ + DL + G++K MP TA LF G++A+AG+PP N F+SE++T A L Sbjct: 432 AGSVVHQTHRHDLEHMGGLIKRMPVTAGLFLAGSVAIAGLPPLNGFVSEWLTFQAAL 488 >UniRef50_C3NDS2 NADH dehydrogenase (Quinone) n=13 Tax=Archaea RepID=C3NDS2_SULIY Length = 440 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 121/351 (34%), Positives = 187/351 (53%), Gaps = 28/351 (7%) Query: 80 LAILGVIGFLTGIYSIGYMR-HEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVM 138 L ++ I L+ +YS+ Y++ ++ L YY + F +ML V NN +M Sbjct: 64 LLMIASIYLLSTLYSMNYIKPSKIVSERL-------YYILLNSFASSMLFTVIMNNYGLM 116 Query: 139 WAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAE 198 W +E TT++SA L+ +SLEA W+YIII + GV LF + +Y N ++ Sbjct: 117 WVGVELTTVTSALLIIAEASETSLEATWRYIIIVSAGVTLALFSIIFIYYNYHTLTV--- 173 Query: 199 MAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS 258 +E+L + + + LA LIGFGTK G+FPM+ WLPDAHSEAPSP+SAL S Sbjct: 174 -----TEILTKPE--NNIITKLAVALALIGFGTKAGVFPMYTWLPDAHSEAPSPISALFS 226 Query: 259 AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSS 318 VLL A V+ Y + + + +IF LS+ A+ + Q IKR+ AYS+ Sbjct: 227 GVLLPAATYVVYMVYQV-------NPLTNIFVIFTTLSIITASIILTYQWHIKRMFAYST 279 Query: 319 VENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLK 378 +ENM L + L IG PLG A++ +L H+ K F SG VL G + + + G+ Sbjct: 280 IENMNLALLGLTIGQPLG---AIILLLAHAFGKAGAFYSSGIVLKVLGEKRIENIGGLHT 336 Query: 379 IMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLL 429 + T+V +LA+ G PPF F+ EF + + + +++ +L+++ L Sbjct: 337 KLKLTSVSLLLSSLAVTGTPPFATFIGEFFILQTLIQKGYIIEFILIVISL 387 >UniRef50_A1RWL8 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL8_THEPD Length = 737 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 135/364 (37%), Positives = 198/364 (54%), Gaps = 37/364 (10%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH-LFLFTMLL 128 L++D L L ++ + + I+SIGY E+ GE S Y FF+ LF+ +M+L Sbjct: 85 LYVDKLSAFLLLVISFVALYSSIFSIGY--SEMYAGEYS----ISYLTFFYALFVLSMVL 138 Query: 129 VVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS--SLEAAWKYIIICTVGVAFGLFGTVLV 186 VVT+N+ + + + E TLSS LVG Y RS S +AA Y II G A L L+ Sbjct: 139 VVTANDALSFYLSWELMTLSSYMLVG-YEHRSEESRDAAKTYFIIAHAGGACILLSYALL 197 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 Y S+ A + + P + L F+ L+GFG+K G+ P+HAWLP AH Sbjct: 198 YFIKGSLSFDA----------FREGGVPPGIASLIFLLALVGFGSKAGIVPLHAWLPQAH 247 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD--FPNRLLLIFGMLSVAVAAFFI 304 APS VSALLS V+L A+ LIR + G + ++I S + F Sbjct: 248 PAAPSNVSALLSGVMLKVAVYGLIRVVFDFLKPSGVEGGLWGCAVMIIAAFSTIIGVQFA 307 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLH-------------ILNHSLAK 351 +VQ D+KRLLAY S+EN+G++ LG+G L +++ L +LNH++ K Sbjct: 308 VVQHDLKRLLAYHSIENIGIIL--LGVGASLILYSEGLKDVAALALTAALYHLLNHAVFK 365 Query: 352 TLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 +LLF GSG+VL TR+ ++ G+ K +P+T+V F A+A+AG+PP N F SE++T Sbjct: 366 SLLFLGSGSVLKSCRTRNFELLGGLSKYLPWTSVTFLIAAMAIAGVPPLNGFASEWLTYQ 425 Query: 412 AGLA 415 + LA Sbjct: 426 SLLA 429 >UniRef50_Q8R9B0 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit n=2 Tax=Thermoanaerobacteraceae RepID=Q8R9B0_THETN Length = 673 Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 119/363 (32%), Positives = 193/363 (53%), Gaps = 51/363 (14%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH-LFLFTMLL 128 +++D L ++ ++ TG+YSI Y + G GF + +F+ +M+L Sbjct: 76 INVDPLSAFMTLVISLLSIATGVYSISYQEEYIGKG-------TGVMGFLNNIFIVSMIL 128 Query: 129 VVTSNN---LIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVAFGLFGTV 184 VVTS+N +V W E TL S FLV + R +++A + Y ++ VG + + Sbjct: 129 VVTSDNAFYFLVFW---ELMTLVSYFLVCFEQENREAIKAGFVYFVMAHVGTVLIMISFI 185 Query: 185 LVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 L Y + + A F +++ L P + LAF+ +GFG K G+ P H WLP Sbjct: 186 LFYVYTGTF----DFAAF------RNANLSPVIKNLAFLLAFLGFGVKAGIVPFHFWLPQ 235 Query: 245 AHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNR-------LLLIFGMLSV 297 AH APS VSAL+S V++ A+ +IR +G DF +L FG +S Sbjct: 236 AHPAAPSNVSALMSGVMIKTAIYGIIR--------VGVDFLGAATWWWGLTVLAFGAISA 287 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILN 346 + + + D+KRLLAYSS+EN+G++ + +G G G LGI A L H++N Sbjct: 288 VFGVLYAVSENDLKRLLAYSSIENVGIILMGVGAGMMGIATGYVSVGILGILAGLYHLIN 347 Query: 347 HSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 H++ K LLF G+G+V+ + TR++ + G+ + MP+T + F GAL+++ +PP N F+S+ Sbjct: 348 HAVFKGLLFLGAGSVVYRLHTRNMEEMGGLARYMPWTGLTFFIGALSISALPPLNGFVSK 407 Query: 407 FMT 409 + T Sbjct: 408 WFT 410 >UniRef50_C0QBF3 HyfB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBF3_DESAH Length = 655 Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 146/451 (32%), Positives = 220/451 (48%), Gaps = 56/451 (12%) Query: 68 LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 L L +D L G F ++ ++ + IY YM L + + + +M+ Sbjct: 68 LHLRMDPLSGFFGLVICLVSGFSAIYGARYMDAYAGKKHLGIA-----WSLYLILTASMM 122 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVAFGLFGTVLV 186 LV+T+ N ++ A E ++SS LV QR L+A W Y++ +G A L +++ Sbjct: 123 LVITAWNGVLFLIAWEIMSVSSFLLVIFEFQRPGVLKAGWIYLVATHLGTALLLVMFMVM 182 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 N A + L Q+S +L+ F+ +IGFGTK GL P H WLP+AH Sbjct: 183 GKNNA-----------YDFNLVQASSTGASLV---FILAVIGFGTKAGLLPFHVWLPEAH 228 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNR--LLLIFGMLSVAVAAFFI 304 APS VSA++SA ++ + +IR IC IG + L+I G ++ Sbjct: 229 PAAPSHVSAVMSAAMIKTGIYGIIR----ICMLIGPPKASWGWTLIIIGAMTGIFGVMSA 284 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKTL 353 L Q+DIKRLLAYSSVENMG++ + LG+G G LGI +LH+LNH+L K+L Sbjct: 285 LAQQDIKRLLAYSSVENMGIICIGLGLGFLALSTGHPFIGALGISGGMLHVLNHALFKSL 344 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 LF G+G+VL TRD+ + G++K MP T F + A+ +PP N F+SEF+ Sbjct: 345 LFFGAGSVLHSTHTRDMEKMGGLMKSMPVTGTTFVIASAAVCALPPLNGFISEFLIYFGA 404 Query: 414 LARNH-----------LLIIVLLLLLLTLVLAGLVRMAARVLMAKP--PQAVNRGDLGWL 460 + + +L+IV L L+ L LA + A V P +A + + Sbjct: 405 FSSLYASKGTFSVLAGILVIVSLALIGGLALACFSKAAGIVFSGHPRSSEARDAHESPLA 464 Query: 461 TTSPMVILLVMMLAMGTHIP------QPVIR 485 PM++L + L +G P QPV Sbjct: 465 MGIPMIVLAGLCLLVGIFSPLVIDFFQPVFE 495 >UniRef50_B2V8R6 NADH dehydrogenase (Quinone) n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V8R6_SULSY Length = 662 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 114/351 (32%), Positives = 193/351 (54%), Gaps = 33/351 (9%) Query: 71 HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVV 130 +D L F+ ++ ++ F + IYS+ Y++ L+ + ++LF+F+M++V+ Sbjct: 67 KVDNLSLFFVGLVSLLSFASSIYSVSYIKEFENQKVLTFL--------YNLFIFSMIMVI 118 Query: 131 TSNNL--IVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 S N+ ++W I + +S ++ Y ++ +L A YI + +G F + +L+Y Sbjct: 119 LSANVPTFLIWWEI-MSVVSFLLVIFDYKKQENLNAGIFYIFMTHLGTTFIIISFILLYI 177 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 + S+ + + + E +K L F+ LIGFGTK G+F +H WLP AH Sbjct: 178 YSGSLEFKDFVNVNLPEDVK----------FLVFLTSLIGFGTKAGIFLLHFWLPKAHPV 227 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQR 308 APS VSAL+S V++ A+ +LIR+Y + + F ++L G LS + VQ Sbjct: 228 APSNVSALMSGVMIKTAIYMLIRFYFEFLKDMPVAF-GYIVLFIGALSAIYGILYAYVQT 286 Query: 309 DIKRLLAYSSVENMGLVAVELGIGG-----------PLGIFAALLHILNHSLAKTLLFCG 357 DIK++LAYSS+EN+G++ + +G+ + A L H LNH++ K LLF G Sbjct: 287 DIKKMLAYSSMENIGIILIAVGLAMIFKSSHVWILMGISFIAVLYHTLNHTVFKGLLFLG 346 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 +G+VL K T+++ + G+ KIMP T +LF G L + +PPFN F+SE++ Sbjct: 347 AGSVLFKTHTKNMEELGGLNKIMPKTGILFLIGILGITALPPFNGFVSEWL 397 >UniRef50_Q2FKT2 NADH dehydrogenase (Quinone) n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FKT2_METHJ Length = 489 Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 126/394 (31%), Positives = 219/394 (55%), Gaps = 12/394 (3%) Query: 91 GIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSA 150 +Y++GY+ V G+L +L +Y F L + + + N+ + W E TT+ SA Sbjct: 78 ALYAVGYIDGLVRSGDLEKRSLRIFYFGFSFLLAATTMAIFTPNIALFWICAELTTVLSA 137 Query: 151 FLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQS 210 L+ I +++++A+ KYI IC+ + F G + ++ + ++ W+E++ ++ Sbjct: 138 VLIAILALKATIDASLKYIFICSTSMLFSFIGIIFLFEAVRN--KTGVGSLLWTEIVDEA 195 Query: 211 SLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLI 270 + LD ++ +AFVF IGF K+G+ P H WLP AH++APS VSA+LS +LN + ++ Sbjct: 196 AGLDSGMVFIAFVFFFIGFAAKSGIVPFHTWLPLAHAKAPSAVSAVLSGAILNIGMYGIL 255 Query: 271 RYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELG 330 R I+ + + LL++F M++++VA +L Q+ +K L+A+SS+ENMG + + +G Sbjct: 256 RMTGIMKETGVFGQVSVLLIVFAMITISVACLSMLRQKKLKTLIAFSSIENMGFILLGIG 315 Query: 331 IGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG--TRD-LNVVCGMLKIMPFTAVLF 387 IG P+ +F AL H+L+HS K LF +G + +Y TR + + +L + PF AV Sbjct: 316 IGSPVALFWALFHMLSHSCIKAGLFFSAGILHRQYKVPTRTGEDEIGDLLLLQPFAAVTV 375 Query: 388 GGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK 447 G AL GMP F +FLS+ + A A + + I ++LLL L+R V+ + Sbjct: 376 MAGCAALIGMPLFPLFLSKVGILLAAAAIS-VWIPAIVLLLFACAGVALLRFYLPVMAVR 434 Query: 448 PPQAVNRGDLGWLT----TSPMVILLVMMLAMGT 477 P G + + P+V+LL++ + +GT Sbjct: 435 FPA--GEGPVPYTAPLSMKVPIVLLLLLSIMIGT 466 >UniRef50_B1ZSE2 NADH dehydrogenase (Quinone) n=3 Tax=Bacteria RepID=B1ZSE2_OPITP Length = 480 Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 144/483 (29%), Positives = 231/483 (47%), Gaps = 36/483 (7%) Query: 10 LLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLW 69 L++ PL+ +++ FA R R L +G + +L+ W++ AAG W Sbjct: 6 LIVVPLVAAVIAFAWRSER-----GRPWLLPIGGAVHTLLSFWLLVRP----PTVAAGAW 56 Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 D + L + ++ + Y + Y+R +F+ ML V Sbjct: 57 FGFDPVARAVLPAVSLLFLVCSAYGVAYLRLRPERKN-------------RVFVAAMLAV 103 Query: 130 V-------TSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFG 182 + + +L +W A EA TL++ L+ G + EA WKY+++ G+A L G Sbjct: 104 LGLLSAGHQARHLGALWIATEAVTLAAVPLLHFNGTGRAFEATWKYLLVGGTGIALSLLG 163 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 + + AS+ E + ++ ++ Q L ++ A+V LL G+GTK GL PMH W Sbjct: 164 SFCL--GYASLHGGGEGDLTFAALIAQGPGLSRAWVIAAWVLLLAGYGTKMGLAPMHTWK 221 Query: 243 PDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAF 302 PDA+ EAP+ V A+L+ + A ++R ++ A +R LL G+ S+ +AA Sbjct: 222 PDAYGEAPAIVGAMLAGGVTTVAFTAVLRVRAVMDAAGVGLVADRTLLAIGLFSMIIAAL 281 Query: 303 FILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVL 362 F+L RD KR+LAYSSVE+MG+++V +GG G+ AAL H+ ++SL K LF +GN+ Sbjct: 282 FLLGTRDFKRMLAYSSVEHMGILSVGAALGG-AGVAAALFHVWSNSLTKGALFLSAGNIR 340 Query: 363 LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLII 422 G R + V GM + P +A +F LA+ PPF F SE + A H Sbjct: 341 RAAGGRTQDDVAGMALLTPVSARIFVIALLAITACPPFGPFFSELRIVRTAFATGHTTGA 400 Query: 423 VLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTS----PMVILLVMMLAMGTH 478 + L L GL R+ ++ +P A + T+ P +ILL + L +G Sbjct: 401 AMFLGGLLFAFLGLTRLVFAIVDGRPKTATQPMTQRFRETASVIVPPLILLALSLWVGVA 460 Query: 479 IPQ 481 PQ Sbjct: 461 TPQ 463 >UniRef50_A6TVL5 NADH dehydrogenase (Quinone) n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVL5_ALKMQ Length = 498 Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 112/366 (30%), Positives = 195/366 (53%), Gaps = 18/366 (4%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 G+ +D L ++ + L IYS+ + HE+ + YY L LF+M Sbjct: 72 GIEFVVDEFSALMTLVVLSVATLIIIYSLKDIEHEILKEQF-----FSYYTLIFLLLFSM 126 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLV 186 + ++ +N+L ++ +E +L+S ++ I ++ +L A++KY+++ +G L G L+ Sbjct: 127 IGMIFTNDLFNLYVFMEILSLTSCGIISIKRKKENLMASFKYLMLGAIGSVSILMGIALL 186 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 Y + A EV+ Q P +L+A F+L GFG K +FP+H WLPDAH Sbjct: 187 YMVTGHLNMTAAY-----EVITQVWQSYPRNILIALGFILTGFGIKAAIFPLHIWLPDAH 241 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPN-----RLLLIFGMLSVAVAA 301 S AP+P SALLS +++ + + + I+ + +G D + F +LS+ + + Sbjct: 242 SNAPTPSSALLSGLVVKVYVFAIAK---ILFRVLGQDIVQSIGVTEFITYFAVLSMIMGS 298 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 F + Q DIKRLLAYSSV +G + + LG+ LG A L H++ H+L K+ LF +G + Sbjct: 299 VFAIGQTDIKRLLAYSSVAQIGYIFLGLGLATELGFSAGLFHVITHALMKSALFLSAGAI 358 Query: 362 LLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLI 421 + + G RD+ + G+ MP T +F AL + G+P N F+S++ A L + + Sbjct: 359 IYQTGKRDIRDLDGIGYQMPITMGVFSVAALGMIGIPGLNGFMSKWYLSLAVLEADKPVF 418 Query: 422 IVLLLL 427 ++++L+ Sbjct: 419 LIMILI 424 >UniRef50_Q2RUH4 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteobacteria RepID=Q2RUH4_RHORT Length = 1265 Score = 171 bits (432), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 117/347 (33%), Positives = 183/347 (52%), Gaps = 25/347 (7%) Query: 75 LGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNN 134 LGGLF I IG +YS+GYM+H HG + Y+ F L + +++ V T+N+ Sbjct: 278 LGGLFALIFAAIGLAVTVYSVGYMKH--GHG------VNRYFFFLFLMIGSLIGVATTNH 329 Query: 135 LIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVM 194 L + E T S LV +L+A KY +IC G FG ++++A + Sbjct: 330 LGNFYLFWELMTWMSYLLVIHEQTAKALKAGMKYFLICASGAYVMHFGILVLHAQLGTF- 388 Query: 195 PQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVS 254 E+ SE+ L P L + LIGF K GLFP+++WLP+AH APS +S Sbjct: 389 ---EI----SEIAPCIGTLSPALAGVVLATFLIGFMAKAGLFPLYSWLPEAHPVAPSSIS 441 Query: 255 ALLSAVLLNCALLVLIR--YYIIICQAIGS-------DFPNRLLLIFGMLSVAVAAFFIL 305 +S +L +L +++ + I A+G P +L+ G +++ + Sbjct: 442 GPMSGILTKAGILGMVKLLFGIFGVGALGQFGLFAGLSLPGAVLVALGGITLLLGEVQAY 501 Query: 306 VQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY 365 Q DIKRLLAYS++ +G + + LG+G L + L H+ NH++ KT+LF G ++L+ Sbjct: 502 RQTDIKRLLAYSTLAQIGEITMVLGVGTSLALAGGLFHVTNHAVMKTMLFFAVGALILRS 561 Query: 366 GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 R L+ + G+ K+MPFT + G G LA+ G+PPF F+S+F+ I A Sbjct: 562 AGRSLDDLKGLGKVMPFTGLCLGIGLLAIMGVPPFGGFVSKFLMIYA 608 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 118/416 (28%), Positives = 200/416 (48%), Gaps = 39/416 (9%) Query: 79 FLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVM 138 F A++ V+G + +YSIGYM H A ++ FF + + +L V S++L Sbjct: 760 FAALIVVVGAINLLYSIGYMAHGHAQNR--------FFFFFVMMIGGLLGVTASDDLFNF 811 Query: 139 WAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQA 197 +A E + + +LV I+ + + SL+ KY I VG +F G ++ A A + Sbjct: 812 FAFWEVMSSWTLYLVIIHEETKDSLDEGTKYFIFNFVGASFLFLGVAILAAKAGTF---- 867 Query: 198 EMAIFWSEVLKQSSLLDPTLML-LAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSAL 256 EMA+ L Q++L P L ++ +L G K P+ + AP+PVS Sbjct: 868 EMAL-----LPQAALSMPVGWLAVSAGLILAGLLMKAAQLPLRIDYQMHPAPAPTPVSGY 922 Query: 257 LSAVLLNCALLVLIRYYIII--------CQAIGSDFPNRLLLI--FGMLSVAVAAFFILV 306 +SAVLL +++ + + +G+ P+ L+++ L+V A +V Sbjct: 923 ISAVLLKVGPYGVLKIMVALGAGGGLARIAGLGAWMPDPLVVVQVIAALTVLYAGAMAVV 982 Query: 307 QRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG 366 Q +KRLL YS+V +G V + L +G LG+ L+H +NH + K +LF +G +L + Sbjct: 983 QNGVKRLLIYSTVSQLGYVLLGLSLGSALGVAGGLMHFVNHMMLKDILFLAAGCILAQAH 1042 Query: 367 TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLL 426 L+ + G+ + MP T LF L+L+G+PPFN F S+++ H L+ + L Sbjct: 1043 VHSLDDLGGLGRKMPITFGLFLFAGLSLSGIPPFNGFASKWLIYQGAFQGGHYLLAMAAL 1102 Query: 427 LLLTLVLAGLVRMAARVLMA--KPPQAVNRGDLGWLTTSPMVILLVM-MLAMGTHI 479 + LA +++ + P A R +P V+L+ M +LA G+ I Sbjct: 1103 MSSLFTLAAVLKFTHSAFLGPLSPAAATMR-------EAPPVMLIPMGLLAAGSVI 1151 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 101/212 (47%), Gaps = 20/212 (9%) Query: 308 RDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGT 367 RD+ R+L YS++ +G V + LGIG G A++H+ ++ + L+ + +++ + G+ Sbjct: 27 RDLARMLTYSTIAEIGYVLMGLGIGTAAGETGAVMHLGYQAIMRALVVVAAWHLIRRSGS 86 Query: 368 RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH--------- 418 L+ + G ++ MPF +++FG G ++ G+ PF S+F+ + A + + Sbjct: 87 SKLDALVGSVERMPFVSLMFGFGLFSVMGLSPFKGSFSKFVILYAAIENGYWGLAAVGTV 146 Query: 419 LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ--AVNRGDLGWLTTSPMVILLVMMLAMG 476 II + T+ R + +L KP + G L P+V+L ++ + M Sbjct: 147 ASIIAAFYYIHTIQQVCFQRQSHGILGDKPIPFFQIPVGQL------PIVVLALVTVVMS 200 Query: 477 THIPQPVIRILAGASTIVLSGTHDLPAQRSTW 508 P P + + A A + L H LP + W Sbjct: 201 LD-PDPFLMLAANA--VGLPDHHGLPEFETIW 229 >UniRef50_C0GJ30 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ30_9FIRM Length = 497 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 116/360 (32%), Positives = 191/360 (53%), Gaps = 28/360 (7%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 G+ + I+ L ++ + + IYS+ + E+ + YY F L + +M Sbjct: 74 GIEVIIEPFSAFMLLVISAVCLVIMIYSMSSLGREIPASGIG-----WYYTTFLLLVGSM 128 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLV 186 + +V +N+L M+ IE T +++ LV G R + EA++KY+++ TVG F L G L+ Sbjct: 129 MGMVMTNDLFNMYVFIEVTGIAACALVLAKGGRLATEASFKYLLLATVGSGFVLTGIALI 188 Query: 187 Y---ANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLP 243 Y N AE A+ + + P L+ F L+GFG K+ LFP+H WLP Sbjct: 189 YVITGNLNISFVAAEFALVYPQY--------PYLIWTVLSFFLVGFGIKSALFPLHVWLP 240 Query: 244 DAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD-----FPNRLLLIFGMLSVA 298 DAHS AP+ SA+LS +++ ++ L ++Y Q G D F ++LI ++ Sbjct: 241 DAHSSAPTTSSAVLSGLVVKAYIVALAKFYF---QIFGFDLLDQIFIRHMILIMATGAIL 297 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 + F VQ D+KR LAYSSV +G + + LG+ P+G+ A +LHI NH++ K LF + Sbjct: 298 GGSMFAFVQLDLKRRLAYSSVAQIGYIFLGLGLSSPIGLAAGILHIFNHAVMKACLFLAA 357 Query: 359 GNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM----TITAGL 414 G + + G + +N + G+ MP T F AL++ G+P F+ F+S++ +I AG+ Sbjct: 358 GAIYRQTGEKRVNRLQGLAFQMPITMFAFSIAALSMVGLPLFSGFISKWYLALGSIEAGM 417 >UniRef50_B6AS28 NADH dehydrogenase (Quinone) n=3 Tax=Leptospirillum RepID=B6AS28_9BACT Length = 686 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 130/361 (36%), Positives = 195/361 (54%), Gaps = 29/361 (8%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF-HLFLFTMLL 128 L +D L G FLA+LG + +++IG+ R + V + F+ LFL TM Sbjct: 83 LALDPLSGFFLAVLGFVSIPVLLFAIGFFRDDS-------VRKTRWVLFWLPLFLGTMSG 135 Query: 129 VVTSNNLIVMWAAIEATTLSSAFLV-GIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVY 187 V+ +++++ E LSS FLV + +A + Y+++ +G L L+ Sbjct: 136 VLLADDVLTFLVFWEGMALSSFFLVVTDISEEGVRKAGFLYLLMAQIGTGLILLSFFLL- 194 Query: 188 ANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLL--IGFGTKTGLFPMHAWLPDA 245 A+ +S P ++ S S L + + +VF L GFG K G+ P+H WLP+A Sbjct: 195 ADGSS--PDGGLS---SLAFADLSRLPVSPGIAGWVFFLSFAGFGAKAGIVPLHVWLPEA 249 Query: 246 HSEAPSPVSALLSAVLLNCALLVLIRYYI-IICQAIGSDFPNRLLLIFGMLSVAVAAFFI 304 H APSPVSAL+S ++L AL +IR + ++ + F +L G LS Sbjct: 250 HPVAPSPVSALMSGLMLKIALYGMIRVDLGLLGVSHLQPFMGVAVLAIGSLSALFGVLHA 309 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGI-------GGPL----GIFAALLHILNHSLAKTL 353 LVQ D KRLLAY S+EN+G++ + G+ G P+ A+L H+LNH+L K+L Sbjct: 310 LVQHDPKRLLAYHSIENIGIILIGFGLFLIFRTTGHPVPAAVAFSASLFHVLNHALFKSL 369 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 LF G+G +L K GT DLN + G+ + MP T+ LF GALA++G+PP N FLSE++T A Sbjct: 370 LFLGAGTILKKTGTHDLNDLGGLFRTMPATSFLFLVGALAISGLPPLNGFLSEWLTFQAA 429 Query: 414 L 414 L Sbjct: 430 L 430 >UniRef50_C8PJ79 ATP-binding protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PJ79_9PROT Length = 657 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 132/422 (31%), Positives = 215/422 (50%), Gaps = 43/422 (10%) Query: 75 LGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNN 134 LG F ++ IGF + +Y + Y + + V C F+ F+ +MLLV++++N Sbjct: 71 LGNFFSFVVVFIGFASSVYGMSYAEEYIGKANIG-VFAC----LFNTFILSMLLVISADN 125 Query: 135 LIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVM 194 + E TL S+FL+ + + +L+A Y+ I +G AF + +L+ AN A Sbjct: 126 VFCFAVLWELMTLISSFLIIVNDGKGTLKAVMVYLGIAQIG-AFCITCGLLIIANYAGSF 184 Query: 195 PQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVS 254 AE W +V + + AF+ L+GFG+K G++P H WLP AH APS VS Sbjct: 185 EFAE----WGKVN-----MPMGASVAAFILFLVGFGSKAGMWPFHVWLPQAHPAAPSNVS 235 Query: 255 ALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLL 314 AL+S V++ AL L+++ + + +I + +LI G S + L Q D K LL Sbjct: 236 ALMSGVMIKVALFTLVKFTLFLPLSI---YFGLAVLILGAASSLFGVLYALCQHDFKALL 292 Query: 315 AYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKTLLFCGSGNVLL 363 AY SVEN+G++ + LG G +G A H++NH++ K LLF +G+V+ Sbjct: 293 AYHSVENIGIILLGLGTGIYGVAAGNVTLAAVGFLAGCYHVVNHAIFKGLLFLCAGSVIH 352 Query: 364 KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT--------AGLA 415 T++++V+ G+ K MP TAV G + +A +PP N F+SE+ T +G+ Sbjct: 353 ATHTQNMDVLGGLAKKMPLTAVGMFIGIMGIAALPPVNGFVSEWFTYQGMLQGAKESGIF 412 Query: 416 RNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGW--LTTSPMVILLVMML 473 + + ++ L LT VL G+ V+ A P R + W SP+ ++L M++ Sbjct: 413 IRYAFSLAVVALALTGVLVGMHLKLYAVIFAGTP----RDEKIWENAKESPLGMVLGMII 468 Query: 474 AM 475 M Sbjct: 469 LM 470 >UniRef50_Q0W2B5 Hydrogenase, membrane subunit 4-like protein (HycC-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2B5_UNCMA Length = 681 Score = 167 bits (424), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 128/351 (36%), Positives = 190/351 (54%), Gaps = 30/351 (8%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 +D L F+ + ++GF +YSIGY R V G+ S L F+LFL +M+LVVT Sbjct: 85 VDPLSAFFILAISIVGFAVSVYSIGYSREYV--GKYSIGLLGS---IFNLFLLSMILVVT 139 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQR--SSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 + N I E ++ S LV +Y R ++ A + YI++ +G AF G +L+ Sbjct: 140 AGNAIQFLIVWEVMSILSYLLV-VYENRKKEAVSAGFLYIVMTHLGTAFITVGFLLLATT 198 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLML-LAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 S + A F K + P L+ LAFV LIGFGTK G+ P+H WLP AH Sbjct: 199 TGSF----DFASF-----KGAGAALPELVKSLAFVLFLIGFGTKAGIMPLHVWLPYAHPA 249 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQR 308 APS VSAL+S V++ A+ +LIR I + + L+L+ LS + F L + Sbjct: 250 APSNVSALMSGVMVKTAIYMLIRC-IFEFLGVADTWWGLLVLLVASLSAVLGVLFALNET 308 Query: 309 DIKRLLAYSSVENMGLVAVELGIGGPLGIFAAL-----------LHILNHSLAKTLLFCG 357 D+KRLLAYS+VEN+G++ + +G + H NHSL K LLF G Sbjct: 309 DLKRLLAYSTVENVGIILIAIGASMVFVSYGLKELAALALIAALFHAFNHSLFKALLFMG 368 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 +G+VL T+++ ++ G+ K MP+T V F GAL+++ +PP N F+SE++ Sbjct: 369 AGSVLYAVHTKNIELMGGLAKRMPWTGVFFFVGALSISAIPPLNGFVSEWL 419 >UniRef50_Q0F380 NADH dehydrogenase subunit N n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F380_9PROT Length = 633 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 129/363 (35%), Positives = 189/363 (52%), Gaps = 45/363 (12%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 +DGL FL ++G + IYS GY++ E G L+ F LF+ ML VV Sbjct: 39 VDGLSAFFLLVIGTLLLPVAIYSQGYLKGEKRLGALAV--------FLPLFVLGMLGVVI 90 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVYANA 190 +++ E ++SS FLV +R + +A + Y+++ + L G ++YA + Sbjct: 91 ADDAFTFMLFWEMMSVSSYFLVTFEHERLENRKAGFIYLLMAHLAGLLILGGFAVLYAAS 150 Query: 191 AS----VMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 S VM A + FW+ AF+ + GFGTK G+ PMH WLPDAH Sbjct: 151 GSFEFSVMRAAHLFPFWATA--------------AFLLVAFGFGTKAGVVPMHGWLPDAH 196 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIG-SDFP---NRLLLIFGMLSVAVAAF 302 APS VSAL+S ++L A+ +R ++ IG DF L+L G S Sbjct: 197 PVAPSNVSALMSGIMLKVAVFGFLR---VVWDLIGPGDFQWWWGALVLTAGSASAVSGVL 253 Query: 303 FILVQRDIKRLLAYSSVENMGLVAVELG-------IGGPL----GIFAALLHILNHSLAK 351 F L Q D+KRLLAY S+EN+G++ + LG G PL G+ A L H +NH+L K Sbjct: 254 FALQQHDLKRLLAYHSIENIGIILIGLGLGMLLAHFGHPLLAALGLIAGLYHTINHALFK 313 Query: 352 TLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 LLF G+G VL GTRD+ + G++ MP TA+ F ++++ +PPFN F+SE++T Sbjct: 314 GLLFMGAGAVLHVTGTRDMETMGGLIHRMPATALFFLVACVSISALPPFNGFVSEWLTFQ 373 Query: 412 AGL 414 L Sbjct: 374 TAL 376 >UniRef50_C5A2R1 Formate hydrogenlyase II subunit D (Mhy2D) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A2R1_THEGJ Length = 694 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 132/410 (32%), Positives = 200/410 (48%), Gaps = 46/410 (11%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMR--HEVAHGELSPVTLCDYYGFFHLFLFTML 127 H+DGL + +LG +G T IYS YM G L Y + F+ +M+ Sbjct: 76 FHVDGLSLILCLVLGSLGLATSIYSPKYMEFYERFGRGWL-------YVVLYSTFVLSMV 128 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFL-VGIYGQRSSLEAAWKYIIICTVGVAFGLF-GTVL 185 L+VT++N + E T +S L V + +A WKY + V L L Sbjct: 129 LIVTTSNFLWFVFFWEVMTFTSYLLMVWENDEEYVRKAGWKYFVTMHVASTLPLIVALAL 188 Query: 186 VYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDA 245 +YA A S+ E L +L L + ++ L+GFG+K G+ P+H WLPDA Sbjct: 189 LYAKAGSI-----------EGLNFDNLSKLHLGPIYYLLFLVGFGSKAGVVPLHFWLPDA 237 Query: 246 HSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIG-SDFPNRLLLIFGMLSVAVAAFFI 304 H APS VSALLS ++ A+ LIR C +G ++ ++ I G +++ V + Sbjct: 238 HPAAPSNVSALLSGAMIKVAVYGLIR---TTCFILGLNETFGYIVAILGTVTLTVGTLYA 294 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFA---------------ALLHILNHSL 349 L Q D KRLLAY SV MG + LG+G + + A L H++NH++ Sbjct: 295 LKQTDAKRLLAYHSVGQMGYI--WLGVGAGIALMAKGGSYAAFGAIAMAAGLYHLVNHAI 352 Query: 350 AKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 K LLF +G+VL + TR+LNV+ G+ K+MP TA+ A+++AG PPFN F+S++M Sbjct: 353 FKGLLFLSAGSVLYRTHTRELNVLGGLAKLMPLTALFTFIAAMSIAGEPPFNGFMSKWMI 412 Query: 410 ITAG-LARNHLLII--VLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGD 456 L+ + LL+ V+ L + LA V+ P + + Sbjct: 413 YQGTFLSGDGLLVFCGVMALFISAATLASFVKFYTTAFGGVPTKVTENAE 462 >UniRef50_B2HHH3 Oxidoreductase n=6 Tax=Mycobacterium RepID=B2HHH3_MYCMM Length = 658 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 128/360 (35%), Positives = 188/360 (52%), Gaps = 37/360 (10%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 G+ I LGG F+A+ G + + GIYSIGY R E L V L +F+ M Sbjct: 62 GVDFDIGRLGGFFIALTGAVAVVAGIYSIGYARRE----HLGAVALT----MLPVFVTAM 113 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVGVAFGLFGTVL 185 LLV + ++ A E +SS LV +R+ + AA Y ++ +G A L G ++ Sbjct: 114 LLVPAAGSVSTFLLAWELMAISSLVLVATDHRRAQVRSAAGYYAVMTQLGFATLLLG-LM 172 Query: 186 VYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFL--LIGFGTKTGLFPMHAWLP 243 V A AA A+MA+ P+ + FVF+ L+GFG+K GL P+HAWLP Sbjct: 173 VLAAAAGTDRFADMAV-------------PSEGVRTFVFVATLLGFGSKAGLLPLHAWLP 219 Query: 244 DAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFF 303 AH E+PSPVSAL+SA ++N + L+R + + G + LL+ G S Sbjct: 220 RAHPESPSPVSALMSAAMVNLGIYGLVRIDLQLL-GPGPKWWGVTLLVIGAFSAMYGVLQ 278 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGI--------GGPLGIF---AALLHILNHSLAKT 352 V D+KRLL YS++ENMGLV + LG GP + AALLH++ H+ K+ Sbjct: 279 ASVATDLKRLLGYSTIENMGLVTLGLGAATLLSAAGAGPAAVIAMTAALLHLIAHAAFKS 338 Query: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 L F +G+VL+ RDL+++ G+ M T FG AL +G+P F+SE++ + + Sbjct: 339 LGFLAAGSVLVATQQRDLDMLGGLAHRMRCTTTFFGIAALGASGLPLGAGFVSEWLLVQS 398 >UniRef50_B6YWP6 Hydrogenase 4, subunit 3 n=3 Tax=Thermococcus RepID=B6YWP6_THEON Length = 634 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 144/443 (32%), Positives = 211/443 (47%), Gaps = 38/443 (8%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF-FHLFLFTMLL 128 L +D L G F+ ILG++GF T +Y I Y+ L Y F + LFL M L Sbjct: 77 LKVDPLSGFFMIILGILGFCTSVYGIAYLDMYKGDKRL--------YAFNYPLFLLFMFL 128 Query: 129 VVTSNNL---IVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVL 185 V+ S NL +V W E TL S FLV +L A KY + F L VL Sbjct: 129 VLVSWNLLWFVVFW---ELMTLFSQFLVAFERNEKTLIATLKYFCMTKAAADFMLIAIVL 185 Query: 186 VYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDA 245 V ++ + I S+++ P M L +IG G K L P H WLPDA Sbjct: 186 VLI---TISGGGDYDILSSQLVNYFRS-HPLEMYLVSAGFMIGLGVKAALVPFHVWLPDA 241 Query: 246 HSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLI--FGMLSVAVAAFF 303 + EAPS VS+LLS + + ++ R+++ PN LLI FG L++ + Sbjct: 242 YVEAPSNVSSLLSGAMEKMPVYMMFRFFLSFTPLT----PNIGLLIALFGTLTLFFGTMY 297 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKT 352 L Q D KRLLAY SV +G V LG G G L + A+L H LNH+ K Sbjct: 298 ALKQTDSKRLLAYHSVGQIGYVVFALGAGIYLLSKGYTTFGALALMASLFHALNHAFFKG 357 Query: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LLF +G++L + G+RDL+ + G+ + MP TA G+L++AGMPPFN F+S++M + Sbjct: 358 LLFLTAGSILYRTGSRDLDHLGGLARFMPITAFAALIGSLSIAGMPPFNGFVSKWMIYVS 417 Query: 413 GLARNHL--LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLV 470 L L L L L + + A V+ + + P + + ++ + +IL V Sbjct: 418 TLPTPTLVSLFGALALFISAVTTASFVKYFTSIFVRPPAKEITVKEVPVSMWASQLILAV 477 Query: 471 MMLAMGTHIPQPVIRILAGASTI 493 + + G + P+ I ++ Sbjct: 478 LCVIFGVYPALPLEAISKAVDSV 500 >UniRef50_C7MLM1 Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=3 Tax=Bacteria RepID=C7MLM1_CRYCD Length = 672 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 120/396 (30%), Positives = 200/396 (50%), Gaps = 40/396 (10%) Query: 82 ILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF-HLFLFTMLLVVTSNNLIVMWA 140 ++ V+ F IY + Y G GFF +LF+ +M V+ +N + Sbjct: 86 VISVLAFAAWIYGLNYFDEYKGQG-------LGTMGFFMNLFIASMGFVICVDNALWFLV 138 Query: 141 AIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMA 200 E +L+S FLV + +S++ + Y+I+ +G F ++ + A + E Sbjct: 139 FFELMSLTSYFLVIVEQNETSIKGGFLYLIMAHIG----FFLIMIAFFVMAGLTGSFEFQ 194 Query: 201 IFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAV 260 F ++S P + L FV IGFG K G+ P H+WLP AH APS VSAL+S Sbjct: 195 AF------RTSAFSPVISSLVFVLCFIGFGCKAGMIPFHSWLPQAHPAAPSNVSALMSGG 248 Query: 261 LLNCALLVLIRYYIIICQAIGSD-FPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSV 319 ++ + +++ + + Q+ + + L+L+FG +S + + L + DIKRLLAY SV Sbjct: 249 MIKIGVFGMVKVGLDLLQSSPVELWWGILVLLFGAVSSVLGVVYALAEHDIKRLLAYHSV 308 Query: 320 ENMGLVAVELGIG-------GP----LGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTR 368 EN+G++ + +GIG P LG A H+ NH++ K LLF G+G+VL GTR Sbjct: 309 ENIGIILLGVGIGFIGVAVGNPIVAVLGFLAGFYHLFNHAMFKGLLFLGAGSVLYSTGTR 368 Query: 369 DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT----ITAGLARNHLLIIVL 424 ++ + G+ ++MP TA+ F G+LA++ +PP N F+SE+ T TA A + ++ + Sbjct: 369 NMEKMGGLARVMPVTAMCFLIGSLAISAIPPLNGFVSEWFTYQSMFTAAFAGDAVIRLFA 428 Query: 425 LLLLLTLVLAG------LVRMAARVLMAKPPQAVNR 454 ++L + G V+ ++ P V R Sbjct: 429 AFAAVSLAITGALAVTCFVKAYGVTFLSAPRSDVAR 464 >UniRef50_B1ZSD9 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria RepID=B1ZSD9_OPITP Length = 662 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 139/432 (32%), Positives = 209/432 (48%), Gaps = 49/432 (11%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 + +D + FL +L V+G +YS Y + AH P + ++ L L TM V Sbjct: 68 VRLDAVSAFFLVLLAVVGGAASVYSREYWS-DRAH----PRSARSGRAWWTLLLATMGAV 122 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAA-WKYIIICTVGVA--FGLFGTVLV 186 + + N + A E +S FL+ QR + AA W Y G FG F L+ Sbjct: 123 LVAANGLHFLIAWELFAVSGYFLITRERQRREVRAAGWLYFAASHAGTLCLFGFF--TLL 180 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 A S ++ D + F L+GFG K GLFP+H WLP AH Sbjct: 181 AARTGS--------------WDLGAMQDRRELAPLFWLALVGFGVKAGLFPLHIWLPSAH 226 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILV 306 + APS VSA+LS V L + L+R+ + + + + ++ + G+ S + F L Sbjct: 227 ANAPSHVSAILSGVALKMGIYGLVRFSGWLPVPVAAGW---VIALLGVASAVLGVAFALG 283 Query: 307 QRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKTLLF 355 Q D+KRLLAY SVEN+G++ + LG G L + LLHI NH L K LLF Sbjct: 284 QHDLKRLLAYHSVENIGIILIGLGFALVATANGEPAWGRLALAGGLLHIWNHGLFKALLF 343 Query: 356 CGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI----- 410 G+G+VL GTR+++ + G+ + MP+TA F GA+A++G+PP N F+SE++ Sbjct: 344 LGAGSVLHATGTREMSRLGGLWRTMPWTAGCFTLGAVAISGLPPLNGFVSEWLVFLGLFD 403 Query: 411 ---TAGL-ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV--NRGDLGWLTTSP 464 GL A + +LL + L LA ++ V + P AV + + G L P Sbjct: 404 AAGAGGLPAWAAVPAAILLGMTGALALACFAKVCGVVFLGLPRSAVAEHAHESGPLMRGP 463 Query: 465 MVILLVMMLAMG 476 M++L +A+G Sbjct: 464 MLLLAACCVAIG 475 >UniRef50_B2A693 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Clostridia RepID=B2A693_NATTJ Length = 499 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 115/395 (29%), Positives = 211/395 (53%), Gaps = 31/395 (7%) Query: 26 KRRLSATRTVTVLHSLGITLLLILALW-VVQTAADAGEIFAAGLW-------LHIDGLGG 77 K+ L+ +++ + L+L++A++ V++ +++ + G W ++D LG Sbjct: 29 KKNLNEYVSLSAM-----ILMLVIAIYLVIEVSSNGPFTYVVGEWAPPWGIEFNVDYLGV 83 Query: 78 LFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIV 137 I+ IGFL +Y+ + HE+ LS YY + L + +M+ +V +N++ Sbjct: 84 YMTLIITGIGFLALLYASRDLHHELQENALS-----LYYPLYMLLMASMIGMVLTNDIFN 138 Query: 138 MWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVY---ANAASVM 194 ++ +E T L+S ++ + + ++EA+ KY+++ +G A L G L+Y + Sbjct: 139 LFVLLEITLLTSVAIICVKENKDTIEASLKYLMLNALGSATVLMGIALLYIITGHLNMTY 198 Query: 195 PQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVS 254 E+A+ + + PT+++ +GFG K+ LFPMH WLPDAH APSP S Sbjct: 199 IAQELAVNFEQY--------PTVIMAIVALFFVGFGVKSALFPMHVWLPDAHGSAPSPSS 250 Query: 255 ALLSAVLLNCALLVLIRYY-IIICQAIGSDFP-NRLLLIFGMLSVAVAAFFILVQRDIKR 312 A+LS +++ ++ LIR+Y I++ + I P +LL F + + + F + Q DIK+ Sbjct: 251 AVLSGLVIKVYVVSLIRFYFIVLPEEILELMPVGEILLWFAAAGMILGSMFAIAQEDIKK 310 Query: 313 LLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNV 372 +LAYSSV + V + +G+ LLHILNH++ K++LF +G ++ G R ++ Sbjct: 311 MLAYSSVAQISYVFLGIGLLSLTSFQGGLLHILNHAIIKSMLFLIAGAIIYTSGIRKISH 370 Query: 373 VCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 + G+ P + F GA A+ G+P N F+S++ Sbjct: 371 MHGVGLRYPLIMICFTLGAFAMIGIPGTNGFISKW 405 >UniRef50_B8J2B7 NADH dehydrogenase (Quinone) n=2 Tax=Desulfovibrio RepID=B8J2B7_DESDA Length = 1245 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 119/360 (33%), Positives = 182/360 (50%), Gaps = 47/360 (13%) Query: 78 LFLAILGVIGFLTGIYSIGYM--RHEVAHGELSPVTLCDYYGFFHLFLFTMLL-VVTSNN 134 LFL + ++ + +YS GY+ RH+ Y FF L F L +V+S++ Sbjct: 287 LFLIMTSLVALVVCVYSQGYIHGRHQ------------GRYWFFLLLTFASLAGIVSSSD 334 Query: 135 LIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVM 194 ++ E T +S FLV G+RS+ +A KY I+C G F L G ++ Sbjct: 335 APGLYGYWELMTFASYFLVVHEGRRSAFDAGLKYYIMCAGGALFMLPGLLM--------- 385 Query: 195 PQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVS 254 L Q + P + AFV L GFG K GL P+H+WLPDAH APS VS Sbjct: 386 ------------LGQGFVPTPVVQA-AFVLCLAGFGVKAGLVPLHSWLPDAHPAAPSSVS 432 Query: 255 ALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRL--------LLIFGMLSVAVAAFFILV 306 A LS ++ + ++ +++ + + S P L+ G ++ + L Sbjct: 433 APLSGIITKMGIFGIVA--VLLMRPMVSSLPGLFGLSWLGTGLVFTGAATLILGEVMALR 490 Query: 307 QRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG 366 Q DIKR+LAYS++ +G +A+ LGIG L AL H+ NH++ K LLF G+G ++L+ G Sbjct: 491 QDDIKRMLAYSTLGQIGEIALVLGIGTWLSTTGALWHMFNHAIMKDLLFLGAGALILRSG 550 Query: 367 TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLL 426 +R L + G+ + MPFT G G +++ G+PPF F S+F+ I A L + L+L Sbjct: 551 SRKLADLRGLGRQMPFTVACMGIGLVSIMGLPPFGAFYSKFLMIQAATEAGQLWLAALIL 610 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 115/466 (24%), Positives = 206/466 (44%), Gaps = 50/466 (10%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 ++ +V + + ++ P+ +LL K R+ A +T S+G+ LL AL V+ Sbjct: 690 LAMNVSWPIYVVVPVFGALLPALFHKNRIMAGKT-----SVGV--LLATALLVI------ 736 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 +F GL D L F I+ ++G + Y++GYM H +H + +Y F Sbjct: 737 --LFGRGL----DTLSFCFALIVPLLGAVNMAYALGYMEH--SHRQWR------FYCAFT 782 Query: 121 LFLFTMLLVVTSNNLI---VMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVA 177 ++ + S L+ + W + + TL A + G ++SL A+KY I Sbjct: 783 AMCGGLVGMAASQYLLSFFLFWEIMSSWTLYLA--IAHEGDKASLREAFKYFI------- 833 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 F +FG ++ + P + E + S L P L L GF K P Sbjct: 834 FNVFGAGFIFVGLCVIGPFTPFSTLLLEGMAPS--LSPGAAWLGMALLAAGFVMKAAQLP 891 Query: 238 MHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIG-----SDFPNRLLLI- 291 + AP+PVS +S+VLL A+L LI+ ++++ F + + Sbjct: 892 FRIDWQMHPALAPTPVSGYISSVLLKSAILGLIKLFMLLGGGFALAGVLGGFEQGSISVA 951 Query: 292 ---FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 G +++ +AA L IK + YS+V +G + + + GG LG +LH++NH Sbjct: 952 VMWIGGITIIMAALQALRSNGIKLIFIYSTVSQLGYMVLAVAAGGALGYAGGMLHVINHV 1011 Query: 349 LAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 K LLF G V+ L+ + G+ + MPFT +F L++ G+PP + F S+++ Sbjct: 1012 FFKDLLFLVCGAVMFASHKETLDDLGGIGRKMPFTLAMFAIAGLSVVGVPPTSGFSSKWL 1071 Query: 409 TITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR 454 A + + +L L+ L +A + + + +P + ++ Sbjct: 1072 IYHALMEAGQPFLALLSLIGSVLTMAYIAKFLHAAFLGQPARDLDE 1117 >UniRef50_D1JBE0 Putative NADH-quinone oxidoreductase, subunit M n=1 Tax=uncultured archaeon RepID=D1JBE0_9ARCH Length = 509 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 147/494 (29%), Positives = 241/494 (48%), Gaps = 66/494 (13%) Query: 43 ITLLLILALWVVQTAADAGEIF--------AAGLWLHIDGLGGLFLAILGVIGFLTGIYS 94 I + L++A++V+ G I+ G+ +D L L I+ +G L I+S Sbjct: 42 IFIQLVMAIFVLNYVLTNGTIYYWLGGWSPPWGIEYVVDALNAYILVIILFLGLLCAIHS 101 Query: 95 IGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVG 154 + HE+ P ++ + LF+ + V + ++ M+ IE +LS+ LVG Sbjct: 102 KSSVEHEL------PGKKASFFTLYQLFITGLCGVTVTGDIFNMYVFIEILSLSAYALVG 155 Query: 155 IYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLD 214 G +SL A + Y+I+ ++G F L G +Y+ S+ + SLL Sbjct: 156 SKGG-TSLRAGFTYLIMGSIGACFFLIGIGFLYSVTGSLN------------IHDLSLLL 202 Query: 215 PTL-----MLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVL 269 P L + AF+F+ +G G K ++P+H WLPDAH APSP+SA+LS +++ L Sbjct: 203 PPLYGSKTVQAAFIFITVGMGIKMAIYPLHTWLPDAHPAAPSPISAMLSGIMIMVGFYAL 262 Query: 270 IRYYIIICQAIGSDFP-----NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGL 324 IR + + FP +LLI G+LS+ VA F Q D+KRL AYSS+ N+G+ Sbjct: 263 IR-------VLFTLFPFYYNYGLILLILGLLSMTVANLFAYFQMDLKRLFAYSSIVNVGI 315 Query: 325 VAVELGIGG---------------PLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRD 369 + G+ L + ALLHIL+H + K L+F GSGN+ TRD Sbjct: 316 ITTGAGVAAYILSIEPAGAIPEAASLAMAGALLHILSHGIGKALVFLGSGNIHASIHTRD 375 Query: 370 LNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA-GLARNHL----LIIVL 424 L + G+ + MP+T+ G L+L GMPP F S+F+ + A +A + +++ Sbjct: 376 LAKMGGIARDMPYTSYSMSVGLLSLLGMPPLIGFWSKFLILMAVAMAIQSIGGVVMVMTF 435 Query: 425 LLLLLTLVLAGLVRMA-ARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPV 483 +++L ++ A + A+VLM + A + S + L ++ G +P P+ Sbjct: 436 IIILFNVIYAATYYLKVAKVLMIESGAARTHEAPFSMVFSVVAFALACLIG-GLLLPIPL 494 Query: 484 IRILAGASTIVLSG 497 IR+ AS ++L G Sbjct: 495 IRVATRASQMILGG 508 >UniRef50_Q3AB32 Carbon monoxide-induced hydrogenase, membrane anchor subunit n=2 Tax=Clostridia RepID=Q3AB32_CARHZ Length = 1274 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 116/361 (32%), Positives = 187/361 (51%), Gaps = 27/361 (7%) Query: 69 WL--HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 WL + D L F ++ IGFL +YS+GY + + Y+ F L L T+ Sbjct: 279 WLAGNFDSLSKFFALLMAFIGFLVTLYSVGYFKAKPYANR--------YFFFLLLMLGTL 330 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLV 186 L + TS L + E T +S FLV + +L A +KY I+CT G L + + Sbjct: 331 LGLTTSKELGNFYVFWELMTWTSYFLVIQEQTQKALRAGFKYFIMCTSGAYIMLLAILTL 390 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 + S+ + + +L P LML+ +IGFG K GL P+H+WLPDAH Sbjct: 391 HVKLGSLD--------LTTISANLQVLSPGLMLVVLGMFIIGFGVKAGLVPLHSWLPDAH 442 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIII-----CQAIGS--DFPNRLLLI--FGMLSV 297 APS +SA +S +L + L+R ++ +G+ F +I G ++ Sbjct: 443 PVAPSSISAPMSGILTKTGIYGLVRILFVVFGVSLLTKVGTTGQFSTIGFIISLLGAFTL 502 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 L+Q D+K++LAYS++ +G + + LG+G L AL HILNH++ K LLF Sbjct: 503 LYGEIMALLQTDVKKMLAYSTMAQVGEIVITLGVGTYLSFIGALYHILNHAIMKNLLFLA 562 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 G ++L+ ++++N + G+ ++MP T++ F G LA+ G+PPFN F+S+F+ + A + Sbjct: 563 VGALILRVKSQEINKLKGIGRVMPVTSLCFSIGILAIMGLPPFNGFISKFLMLYALVQSG 622 Query: 418 H 418 H Sbjct: 623 H 623 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 136/449 (30%), Positives = 219/449 (48%), Gaps = 29/449 (6%) Query: 51 LWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPV 110 L V A +FAA L I FL + IG L +YS+GYM HE A Sbjct: 743 LAVATMVATLATVFAASTGLDIFSRSFAFL--IAFIGVLNLLYSLGYMEHEHAQNR---- 796 Query: 111 TLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYI 169 +Y FF L + +L V S +L +A E + + + V I+ + S +L +KY Sbjct: 797 ----FYLFFTLMIGGLLGVAVSKDLFNFFAFWEIMSSWTLYFVIIHEETSEALREGFKYF 852 Query: 170 IICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGF 229 I VG L G +++ NA + EM SE+ + S L L+ L + +LIGF Sbjct: 853 IFNYVGANLLLLGLLVLTVNAGTF----EM----SELAGRLSALPTGLVALGLILMLIGF 904 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYII-----ICQAIGS-- 282 K + P AP+PVS +S+VLL A +++ + + + +G Sbjct: 905 AMKAAMLPFRIDYQMHPPTAPTPVSGYISSVLLKSAPFGMVKLFYVFGGVALLSKLGQLG 964 Query: 283 DFPNRLLLI--FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAA 340 D P+ + ++ L++ +AA L+Q +KRLL Y +V MG + + + +G LG+ Sbjct: 965 DMPSLMYILAWVSGLTILMAAALALLQSGMKRLLIYHTVSQMGYIILGISLGSSLGLAGG 1024 Query: 341 LLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 LLH++NH L K LLF +G +++K G DL+ + G+ + MP T +F G ++AG+PPF Sbjct: 1025 LLHLVNHMLFKNLLFLVAGAIMVKTGIGDLDRLGGIGRKMPVTLSVFAIGTFSIAGIPPF 1084 Query: 401 NIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV-NRGDLGW 459 N F S+++ A + + ++ + +L LL L LA ++ + P+ + N + W Sbjct: 1085 NGFTSKWLIYEASMEKGYVFLALLSLLASVLTLASFLKFLHSAFFGQIPKELENVTEAPW 1144 Query: 460 LTTSPMVILLVMMLAMGTHIPQPVIRILA 488 PMVIL V+ + G P+ I A Sbjct: 1145 TMQIPMVILAVLCMVFGIFPGIPLATIAA 1173 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 8/227 (3%) Query: 291 IFGMLSVAVAAFFILVQ-RDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 +FG++ + V L++ +++ + L SS+ +G V + LG G +G ALLH+ + Sbjct: 15 LFGVMLLLVGELVALLRWKNLIQFLIISSIAEIGFVLLGLGTGTYVGTSGALLHLEYQIV 74 Query: 350 AKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 + L+F + + + + + + G+ + MP T LFG G ++ G+ PF +S+F+ Sbjct: 75 MRGLVFLAAAAFIFRGHSASVEKLQGIGRKMPVTTTLFGFGLFSVMGLSPFKGSISKFLI 134 Query: 410 ITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSP--MVI 467 I A + H L + +++ A ++L + P G TSP M + Sbjct: 135 IYAAIESGHWLSAA-IATFGSIIEAVYFLQVFQILCFEDPVQEGPGAEEVRETSPGLMAV 193 Query: 468 LLVM--MLAMGTHIPQPVIRILAGASTIVLSGT--HDLPAQRSTWHD 510 LLV+ + A+ IP+P I A+ ++L GT LP S W Sbjct: 194 LLVLGVLTALMGLIPEPFIHGAERAAAVLLGGTGPDQLPVFESPWSS 240 >UniRef50_C6NX32 Hydrogenase-4 component B / Formate hydrogenlyase subunit 3 n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NX32_9GAMM Length = 668 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 137/354 (38%), Positives = 192/354 (54%), Gaps = 25/354 (7%) Query: 71 HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVV 130 H+D L G FL +LGV+G +++IGY R GEL V L Y FF M+LVV Sbjct: 77 HLDPLSGFFLLLLGVVGSTASLHAIGYFR-ATQSGELRRV-LIPYPIFFS----AMILVV 130 Query: 131 TSNNLIVMWAAIEATTLSSAFLV-GIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 + + A E LSS FL+ ++ AA+ Y++I +G A L G ++ A Sbjct: 131 LAAGVYTFMVAWELMALSSTFLILSASRAMAARRAAYLYLLIAHLG-ALCLLGAFILLAR 189 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 + + A+ +QS L P L+GFG K G+ P+H WLP+AH A Sbjct: 190 G-NPLSGGSFAVM--AAAQQS--LSPWATQAILGLSLLGFGAKLGMVPLHIWLPEAHPAA 244 Query: 250 PSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRD 309 PSPVSAL+SA +L A+ L+R I A G + + L FG+L+ F +Q D Sbjct: 245 PSPVSALMSAAMLPMAIYGLLRLDWQILSAPGIGW-GVIWLAFGLLTAGFGVLFSTLQSD 303 Query: 310 IKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKTLLFCGS 358 +KRLLAYSS+ENMGLV V LG+G L + A L +LNH+L K+LLF GS Sbjct: 304 LKRLLAYSSMENMGLVLVALGLGRIFVAEGWLSLAGLALCAGLFQLLNHALFKSLLFLGS 363 Query: 359 GNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 G+VL G+ D+N + G+++ MP T +L LA+AG+PP N F SE++ + A Sbjct: 364 GSVLHSTGSVDMNRLGGLIRSMPQTTLLMLIATLAIAGLPPLNGFASEWLLLQA 417 >UniRef50_A0RMA9 Hydrogenase 4 membrane subunit n=2 Tax=Campylobacter fetus RepID=A0RMA9_CAMFF Length = 650 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 117/349 (33%), Positives = 192/349 (55%), Gaps = 35/349 (10%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 I L G F I+ I IY+IGY++ G L+ + F+ F+ +MLLVV+ Sbjct: 69 ITPLSGFFSFIITFIAIGICIYTIGYIKEFKDRGNLAV-----FAALFNFFILSMLLVVS 123 Query: 132 SNNL---IVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 S+++ IV+W E TL SA L+ ++ S + Y+ I +G AF + +L + Sbjct: 124 SSDVFSFIVLW---EIMTLISALLLKFNDEKHSNKTVMIYLSIAQIG-AFCILIALLFIS 179 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 A + WS++ +DPT+ + LLIGFG+K G+FP H W P + Sbjct: 180 YFAGSFSFIQ----WSKLD-----IDPTVATCILILLLIGFGSKIGMFPFHVWAPLVYPL 230 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQR 308 APS V+ +LS ++ A+ +I++ +I+ I S F ++ + G +S + + L+Q Sbjct: 231 APSNVAGMLSGIMSKMAIFGIIQFSVIL--PITSGFALSVVAL-GAISALIGITYALIQN 287 Query: 309 DIKRLLAYSSVENMGLVAVELGIG-------GP----LGIFAALLHILNHSLAKTLLFCG 357 D +L++YSSVEN+G++ + +G+G P LG AL H+LNHS K+LLF G Sbjct: 288 DYIKLISYSSVENLGIIMLGVGVGFYGISIAEPTLVLLGFIGALFHVLNHSTFKSLLFLG 347 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 SG++ T+++N + G+ + MPFTA+ F GA++++ +PP N F+SE Sbjct: 348 SGSIYSVTRTKNMNSLGGLARKMPFTALFFLIGAISISALPPLNGFISE 396 >UniRef50_A5FPH4 NADH dehydrogenase (Quinone) n=5 Tax=Dehalococcoides RepID=A5FPH4_DEHSB Length = 644 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 115/382 (30%), Positives = 200/382 (52%), Gaps = 56/382 (14%) Query: 47 LILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGE 106 L ++LW + + D H+D L F+ I+ +I +YS+GY H ++ Sbjct: 58 LDISLWSIASGLDIA--------FHLDRLASFFVIIISLISLCVAVYSLGYNNHISSNER 109 Query: 107 LSPVTLCDYYGFFHLFLFTMLLVVTSNN---LIVMWAAIEATTLSSAFLV-GIYGQRSSL 162 + ++ F +F+ +M+ VV S N LI W E LSS FL+ Y + + Sbjct: 110 ANLLS-----AFMAVFILSMIGVVASANTFSLIFFW---EIMALSSFFLMMNDYQEPFTQ 161 Query: 163 EAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAF 222 A Y ++ + F + V++Y S F + SS++ + +LAF Sbjct: 162 RAGVYYFVLTQLSTIFLMLMAVVMYIQNGS---------FALSLSGASSVIQSLVFVLAF 212 Query: 223 VFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQ---- 278 + FG K G+ P+H WLP AHS +PS VSAL+S V+L A+ L+R+ + + Sbjct: 213 ----LAFGIKAGIIPLHKWLPYAHSASPSNVSALMSGVMLKVAIYGLVRFLMDVLSPEMW 268 Query: 279 -AIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGI 337 +G +L+ GM+S + + + D+K LLA+ S+EN+G++ + +G+ G+ Sbjct: 269 WGVG-------ILLLGMISALLGIIYAFKEHDLKMLLAFCSIENIGIILMGIGLYVIFGL 321 Query: 338 F-----------AALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVL 386 + +AL H LNH++ K+LLF +G+V++ G R++ + G++K+MP+T+V+ Sbjct: 322 YGLDTLAMLALGSALFHSLNHAIFKSLLFMTAGSVVIAVGDRNIEKMGGLIKLMPYTSVI 381 Query: 387 FGGGALALAGMPPFNIFLSEFM 408 F GA++++ +PPFN F+SE M Sbjct: 382 FLVGAVSISALPPFNGFMSELM 403 >UniRef50_A7GWM7 ATP-binding protein n=4 Tax=Epsilonproteobacteria RepID=A7GWM7_CAMC5 Length = 655 Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 134/451 (29%), Positives = 229/451 (50%), Gaps = 51/451 (11%) Query: 75 LGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNN 134 LG F ++ IGF + +Y + Y V + V C F F+ +MLLV++++N Sbjct: 71 LGNFFSFVVVFIGFASSVYGMSYADEYVKKANVG-VFAC----LFSTFILSMLLVISADN 125 Query: 135 L---IVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAA 191 + +V+W E TL S+FL+ + +++L+A Y+ I +G AF + +L+ A A Sbjct: 126 VFCFVVLW---ELMTLVSSFLILVNDGKNTLKAVMVYLGIAQIG-AFCITCGLLIIAYYA 181 Query: 192 SVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPS 251 +E + F + + + F+ L+GFG+K G++P H WLP AH APS Sbjct: 182 G---SSEFSAFMNVKMPMGASAT------TFILFLVGFGSKAGMWPFHVWLPQAHPAAPS 232 Query: 252 PVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIK 311 VSAL+S V++ AL L+++ + + ++ + +LI G S + L Q D K Sbjct: 233 NVSALMSGVMIKVALFTLVKFTLYLPLSV---YFGLAILILGAASSLFGVLYALCQHDFK 289 Query: 312 RLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKTLLFCGSGN 360 LLAY SVEN+G++ + LG G +G A H++NH++ K LLF +G+ Sbjct: 290 ALLAYHSVENIGIILLGLGTGIYGLAAGNMTLAAIGFLAGCYHVVNHAIFKGLLFLCAGS 349 Query: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA---GLARN 417 V+ T++++++ G+ K MP+TAV G + +A +PP N F+SE++T G + Sbjct: 350 VIHATHTQNMDILGGLAKKMPWTAVGMFIGIMGIAALPPVNGFVSEWLTYQGMLQGAMGD 409 Query: 418 HLLI-----IVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSP------MV 466 +L+ + ++ L LT VL G+ V+ A P+ ++ SP MV Sbjct: 410 SILVRYAFTLSVVALALTGVLVGMHLKLYAVIFAGTPR--DKKIWENAKESPIGMVLGMV 467 Query: 467 ILLVMMLAMGTHIPQPVIRILAGASTIVLSG 497 +L++ + G V I+ ++I +SG Sbjct: 468 VLMIGCVGFGVGANVIVDYIMKAVNSITVSG 498 >UniRef50_B9DJY9 Putative NADH dehydrogenase I chain L n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DJY9_STACT Length = 824 Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 118/359 (32%), Positives = 198/359 (55%), Gaps = 35/359 (9%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 +DGL +F ++ +IG +Y+ Y+ E H +L +Y + LF+F ML V Sbjct: 99 FRLDGLSMIFALLITLIGTGVVLYANAYLSKE--HDDLP-----RFYFYLILFMFAMLGV 151 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 V ++N I+++ E T+++S L+ Y +++S A K +I G F L G +++Y+ Sbjct: 152 VLADNTILLYVFWELTSIASFLLISYWYNRKASQNGALKSFLITVFGGMFMLIGFIIIYS 211 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLML-LAFVFLLIGFGTKTGLFPMHAWLPDAHS 247 + + SE++ Q+ L + A V +LIG TK+ FP H WLPDA Sbjct: 212 ISGTNTI--------SELVTQTDTLRSSPWFPFAVVCILIGAFTKSAQFPFHIWLPDAM- 262 Query: 248 EAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILV 306 EAP+PVSA L SA ++ L +L R+ I+ A + +++ G++++AV +F + Sbjct: 263 EAPTPVSAYLHSATMVKAGLYLLFRFTPILSYA---SWVGYIVITVGIITLAVGSFVAVG 319 Query: 307 QRDIKRLLAYSSVENMGLVAVELGIGG-------------PLGIFAALLHILNHSLAKTL 353 QRD+K LLAYS++ +G++ +G G + +FA L H++NH+L K++ Sbjct: 320 QRDLKALLAYSTISQLGMIMSMVGFGMLTYSLHKSFVEFFVISLFAGLFHLINHALFKSV 379 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LF G+G + + GTR+L + G+ K++P TA + A+A+AG+P FN FLS+ M T Sbjct: 380 LFMGAGIIDHETGTRNLADLGGLRKLLPVTATIMTISAMAMAGLPFFNGFLSKEMFFTT 438 >UniRef50_Q895D8 Sodium/proton antiporter shaA n=1 Tax=Clostridium tetani RepID=Q895D8_CLOTE Length = 486 Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 121/436 (27%), Positives = 218/436 (50%), Gaps = 25/436 (5%) Query: 68 LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 ++L ID LG F ++ ++ T YS+ YM+HE ++ FF + L L Sbjct: 68 IYLKIDKLGVFFSLLVSILWIFTSFYSMEYMKHEGKENR--------FFAFFLVTLGVTL 119 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVY 187 + S NL+ ++ E TL++ LV G R +L++ KY+I VG F L G + ++ Sbjct: 120 GISFSGNLVTLYLFYEVLTLATFPLVIHSGSREALKSGRKYLIYSFVGATFVLLGMIFLF 179 Query: 188 ANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHS 247 A + F+ + + + L+ TL+ +++ + +GFG K L P H+WLP A Sbjct: 180 AVTKGLD-------FYPKGIIRDFKLNKTLISTSYIVMFLGFGVKAALVPFHSWLPKAMV 232 Query: 248 EAPSPVSALLSAV-LLNCALLVLIR--YYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFI 304 AP+PVS+LL AV ++ + LIR YY+ + + + + LL+F +S+ + +F Sbjct: 233 -APTPVSSLLHAVAVVKSGVFALIRITYYVFGGEIVKLIYGRKYLLLFVTISILMGSFLA 291 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK 364 L Q ++K+ LAYS++ +G + + + I + LLH++NH++ K LF G ++ Sbjct: 292 LHQSNLKKRLAYSTISQLGYILLGILILNGNSLVGGLLHLINHAVIKITLFFCVGTIMYT 351 Query: 365 YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVL 424 G D++ + G+ K MP+T F +++L G+PP N F+S++ GL ++ + Sbjct: 352 RGKTDIDEIKGIGKEMPYTMWCFTISSISLIGIPPTNGFVSKWYLAQGGLLEGKVIFPAI 411 Query: 425 LLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTS-----PMVILLVMMLAMGTHI 479 LL+ L L+ + K Q N + P++++ + + +G + Sbjct: 412 LLISALLTAMYLLPIITVAFFKKDEQHKNVEKIEIKEAPKNMLVPIILITCITIVLGLY- 470 Query: 480 PQPVIRILAGASTIVL 495 P PV+ L S V+ Sbjct: 471 PNPVLNFLLEISKEVI 486 >UniRef50_C8W236 Hydrogenase, membrane subunit n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W236_DESAS Length = 661 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 122/353 (34%), Positives = 191/353 (54%), Gaps = 37/353 (10%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF-FHLFLFTMLLVV 130 +DGL G F+A + ++ L YS YM + ++ F +++F+ +MLLVV Sbjct: 80 MDGLSGFFVATISLVVALVSFYSWNYM-------SIYKTENIAWWSFCYNVFVLSMLLVV 132 Query: 131 TSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 T N I+ E TL+S FLV Y + +A + YI++ +G F + L++ Sbjct: 133 TVTNAIMFLIFWELMTLASYFLVTFEYRHQQVRKAGFSYIVMTHLGTVFIMTAFFLMFKG 192 Query: 190 AASVMPQAEMAIFWS-EVLKQSSL-LDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHS 247 W VL +S L + L FV LIGFGTK G+ P+H WLP AH Sbjct: 193 TGG----------WDFAVLSANSHGLPDAVKSLIFVCALIGFGTKAGIVPLHIWLPLAHP 242 Query: 248 EAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQ 307 APS VSA++S V+L A+ +IR I I G + ++L G++S + + L++ Sbjct: 243 AAPSNVSAVMSGVMLKTAIYGMIRLIIDILGP-GPAWWGGVVLAVGVVSAVMGVLYALME 301 Query: 308 RDIKRLLAYSSVENMGLVAVELGIGGPLGIFA-------------ALLHILNHSLAKTLL 354 D+KRLLA+ SVEN+G++ +G+G L +A L H+LNH++ K+LL Sbjct: 302 HDMKRLLAFHSVENIGIIL--MGLGTALIFYAWSMPVAAAVALAAGLFHVLNHAIFKSLL 359 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 F G+G+V ++D+ + G++K MP TA+LF GA++++ +PPFN F SE+ Sbjct: 360 FLGTGSVYYTTHSKDIEELGGLIKKMPQTALLFLVGAISISAIPPFNGFASEY 412 >UniRef50_Q21AT7 NADH dehydrogenase (Quinone) n=16 Tax=Alphaproteobacteria RepID=Q21AT7_RHOPB Length = 687 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 129/410 (31%), Positives = 207/410 (50%), Gaps = 51/410 (12%) Query: 30 SATRTVTVLHSLGITLLLILAL-----WVVQTAADAGEIFAAGL-WL----HIDGLGGLF 79 S TR T + TL+ AL W+ AA + GL WL +D L F Sbjct: 42 SRTRAATAVVYGATTLVCAGALIGALRWLFAGAAADELVLPIGLPWLGAHFRLDALAAFF 101 Query: 80 LAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMW 139 L ++ + G + +Y++GY +HE A + P FF FL M LVV + + Sbjct: 102 LGVVNLGGAVASLYALGYGQHETAPQRVLP--------FFPAFLAGMNLVVLAADAFSYL 153 Query: 140 AAIEATTLSS-AFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVM-PQA 197 E +L+S A ++ + + + A + Y+++ + FGT+ + + P Sbjct: 154 LCWEFMSLASWALVMTHHREPGNARAGYVYLLMAS-------FGTLALLLAFGLLAGPAG 206 Query: 198 EMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALL 257 + + + P L + +L+G G+K GL P+H WLP AH APS VSAL+ Sbjct: 207 DYGFAAIRAMPHA----PAEATLVLILMLLGAGSKAGLVPLHVWLPLAHPAAPSHVSALM 262 Query: 258 SAVLLNCALLVLIRYYIIICQAIGSDFPNR----LLLIFGMLSVAVAAFFILVQRDIKRL 313 S V+ A+ IR ++ +G PN L+L G ++ + + L+++D+KRL Sbjct: 263 SGVMTKVAVYGFIR---VVFDLLGP--PNWTASVLVLSLGGVTAVMGILYALLEKDLKRL 317 Query: 314 LAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKTLLFCGSGNVL 362 LAYS++EN+G++ V LG+ L AAL H+ NHSL K+LLF G+G VL Sbjct: 318 LAYSTIENIGIIFVCLGLALAFQANGQTLAASLAFTAALFHVFNHSLFKSLLFFGAGAVL 377 Query: 363 LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 + G RD++ + G++ MP T+V+F G +A++ +PPFN F+SE++ A Sbjct: 378 VATGARDMDRLGGLIHRMPVTSVVFLIGCVAISALPPFNGFVSEWLMFQA 427 >UniRef50_B6YTW6 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTW6_THEON Length = 690 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 124/425 (29%), Positives = 205/425 (48%), Gaps = 57/425 (13%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYM--RHEVAHGELSPVTLCDYYGFFHLFLFTML 127 IDGL + I G +G IYS YM + G + Y + +F+ +M+ Sbjct: 74 FQIDGLSLIMCFIFGALGLAASIYSPRYMAIYEKSGRGWM-------YITIYSVFMLSMI 126 Query: 128 LVVTSNNL---IVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYII-ICTVGVAFGLFG 182 L+VT N+ I +W E T +S L + + +A WKY + + V + Sbjct: 127 LIVTIANMFWFIFLW---EVMTFTSYLLTIWESDKEDVRKAGWKYFVTMHIVSTLPLIIA 183 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 L+YA+ +S+ E L SL L + + LIGFG+K+G+ P+H W Sbjct: 184 LALLYADVSSI-----------EGLNFESLAALKLSPVFYALFLIGFGSKSGVVPLHFWA 232 Query: 243 PDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRL----LLIFGMLSVA 298 P+A++ APS VSAL++ L A+ LIR I + PN + + G +++ Sbjct: 233 PEAYTVAPSNVSALMAGALEKVAVYALIRTTCFIMK------PNETFGYAVALLGTVTLT 286 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG-------------GPLGIFAALLHIL 345 V + L Q D KRLLAY S+ +G + + +G+G G + + ++L H++ Sbjct: 287 VGTLYALKQTDAKRLLAYHSIGQIGYIWLGMGVGIVFIARGDMYSAFGAIALASSLYHLV 346 Query: 346 NHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 NH+ K LLF +G++ + +RDLN + G+ K+MPFTA+ A+++AG PPFN F+S Sbjct: 347 NHTFFKGLLFLSTGSIFYRTRSRDLNQLRGLAKLMPFTALFTFIAAMSIAGTPPFNGFMS 406 Query: 406 EFMTITAGLARNHLLII---VLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTT 462 ++M + + LI+ V+ L + LA ++ +P + + Sbjct: 407 KWMIYQSTFLSGNGLIVFFGVMALFISAATLASFIKFYTTAFGGEPTEFTKDAE---EVP 463 Query: 463 SPMVI 467 SPM+I Sbjct: 464 SPMLI 468 >UniRef50_A5G8U2 NADH dehydrogenase (Quinone) n=13 Tax=Desulfuromonadales RepID=A5G8U2_GEOUR Length = 669 Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 141/466 (30%), Positives = 228/466 (48%), Gaps = 69/466 (14%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 +D L +FL I+ +I IY+ GY A + + L ++G L +++ Sbjct: 85 LDHLSAVFLLIIFLISICCSIYATGYW--PAASNQRTSRKLTFFFGLLTAALVLLVIARD 142 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAA 191 S ++ W E LS+ F++ + + A ++ T LF + AA Sbjct: 143 SILFLMAW---EVMALSAYFVLTTEDHKPEVREAGIIYMVATHTGTLALFAMFSLLKGAA 199 Query: 192 SVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFL--LIGFGTKTGLFPMHAWLPDAHSEA 249 + S + ++P L A +F L GFG K GL P+H WLP AH+ A Sbjct: 200 A-----------SHQFSAMTAINPAPPLAAAIFCTALFGFGLKAGLMPLHIWLPSAHATA 248 Query: 250 PSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNR------LLLIFGMLSVAVAAFF 303 PS +SA++S V++ + +IR + S FP LL+ G++S + F Sbjct: 249 PSHISAIMSGVMIKTGIYGIIR--------VLSFFPQPPIWWGITLLVAGIVSAVLGVAF 300 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGI-------GGPL----GIFAALLHILNHSLAKT 352 L Q D+KRLLAY S+EN+G++ + +G+ G PL G+ ALLH LNH+L K+ Sbjct: 301 ALGQHDLKRLLAYHSIENIGIIFMGIGVAVIGQATGQPLLTVLGMAGALLHTLNHALFKS 360 Query: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM---- 408 LLF G+G V+ TR+++ + G+ K MP+TA+LF GA+A+ G+PP N F+SE++ Sbjct: 361 LLFLGAGAVIHATHTREIDRMGGLAKAMPWTAILFLLGAVAICGLPPLNGFVSEYLIYLG 420 Query: 409 ------TITA------GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGD 456 T++ LA L ++ L + + + G+V + AR P D Sbjct: 421 FFGGVNTVSGPAVPAMALAAPSLALVGALAVACFVKVFGIVFLGARRSREIEPLQ----D 476 Query: 457 LGWLTTSPMVILLVMMLAMGTHIPQPVIRIL-----AGASTIVLSG 497 GW +PM++L + + +G PQ V R+L + A T+V++G Sbjct: 477 AGWPMRAPMILLGALCVIIGL-FPQLVARLLQPTIYSWAPTLVITG 521 >UniRef50_Q12ZH4 Na+/H+ antiporter subunit n=2 Tax=Methanosarcinaceae RepID=Q12ZH4_METBU Length = 513 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 125/442 (28%), Positives = 229/442 (51%), Gaps = 27/442 (6%) Query: 9 LLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLG---ITLLLILALWV--VQTAADAGEI 63 LL+ P+L S L R + + + V SL I+++L+L +W +Q + GE Sbjct: 11 LLVAVPILMSALMIFLRSNA-NVQKWLNVSVSLAMMLISIILLLQVWNGGIQVY-EVGEW 68 Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 G+ L D L + + ++ FL +YS+ Y+ + Y+ F+L + Sbjct: 69 GKYGIVLVADLLSSGMVVLSSIVSFLALLYSLDYIEGRSLN--------STYHSLFNLLV 120 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLV------GIYGQRSSLEAAWKYIIICTVGVA 177 + + ++ M+ E L+S LV G+ +EA +KY+I+ +G Sbjct: 121 AGLNGTFLTGDIFNMFVFFEILLLASCGLVIANEKGGVTKSSDKMEATFKYLILNMIGSF 180 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L +YA + + A++++ S + + L + +A +F+++ FG K +FP Sbjct: 181 VMLIAVASLYATVGT-LNMADLSVKIST-MSAAGTLPWHIYAIALLFIVV-FGNKAAIFP 237 Query: 238 MHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIR-YYIIICQAIGSDFPNRLLLIFGMLS 296 MH WLPD H APSP+SA+LS V++ ++R +++I A+ P ++++ +++ Sbjct: 238 MHYWLPDVHPTAPSPISAMLSGVMIKVGAYGILRIFFLIFRDALFLLQP--IIILLALVT 295 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + + A + Q D+K+LLAYSSV +G V + +GIG + AAL+++ NH++AK++LF Sbjct: 296 IIIGAVSAVGQNDVKKLLAYSSVSQIGYVFLGIGIGSVYALAAALVYMANHAIAKSMLFL 355 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 SG ++ GTRD+ + GM K P ++ F GA+++AG+PP F+++F+ AGL Sbjct: 356 TSGGIIHHAGTRDMRHMGGMNKTSPIMSIAFLIGAMSIAGLPPMGGFVAKFILFDAGLRA 415 Query: 417 NHLLIIVLLLLLLTLVLAGLVR 438 + + + + L L + R Sbjct: 416 EYYIPVAIALFFAVFTLFYMFR 437 >UniRef50_B1I6I5 NADH-quinone oxidoreductase subunit N n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=NUON_DESAP Length = 501 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 123/400 (30%), Positives = 202/400 (50%), Gaps = 31/400 (7%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 G+ L ID L G + ++ G +Y+ Y++ +P +Y F L + Sbjct: 72 GIELVIDPLAGGLIVLVAFFGLAALVYAGPYLQGR------TPREQGSFYALFLLAKAGL 125 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLV 186 L + + +L ++ +E ++L++ L+ +G R S+ AA +Y+II T F L G + Sbjct: 126 LGMCATGDLFNLYVFLEISSLAAYALIA-FGGRRSIVAALRYLIIGTAAACFYLLGVGYL 184 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 YA S + A++A+ L+D +++LA VF++ G G K LFP+H WLPDA+ Sbjct: 185 YAMTGS-LNMADLAVL------LPPLMDSPVVILALVFIVAGLGIKMALFPLHGWLPDAY 237 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA---VAAFF 303 S P+PV A ++AV+ + L R + +A G P L + G ++ A + Sbjct: 238 SYTPAPVLAFMAAVMTKVSAYALYRILYFVTEAAGPVSPT--LQVLGWMAAAGILFGSIM 295 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLL 363 + QRD+ R+LAYSSV +G + + L +G L ++ ALLH+L+H+L K LF +G V Sbjct: 296 AIAQRDLWRMLAYSSVAQVGYIVLGLAVGNVLALYGALLHVLSHALVKGGLFFIAGGVSW 355 Query: 364 KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIV 423 + G R ++ G+ K MP T F AL++ G+PP F S++ + L + + Sbjct: 356 ETGVRRVSDFVGIAKKMPLTMGAFVAAALSMIGLPPTLGFFSKWYLVLGCLEAGAWVFVA 415 Query: 424 LLLL--LLTLV----------LAGLVRMAARVLMAKPPQA 451 +L++ LLT V L GL + AR PP A Sbjct: 416 VLVVSSLLTAVYFFRVIENAYLKGLPQPGARAERPVPPGA 455 >UniRef50_A7HGW4 NADH dehydrogenase (Quinone) n=4 Tax=Anaeromyxobacter RepID=A7HGW4_ANADF Length = 654 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 126/364 (34%), Positives = 185/364 (50%), Gaps = 37/364 (10%) Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 G++ A GL L +D L +FL + + L IY +GY R + A G S V L +YG Sbjct: 56 GDVSAPGLGLRVDALSAIFLLPICAVSALGAIYGLGYHR-QAALGARS-VRLQIFYG--- 110 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVGVAFG 179 L M+L+V++ + IV E L LV +R+ ++ AA+ Y+ VG Sbjct: 111 LTTAGMVLLVSATSAIVFLVGWEVMALGGFLLVHTDHERAEVQRAAFVYLAATHVGTLAL 170 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L+ + + S + + AF L+GFG K G+ P+H Sbjct: 171 FALFALLRQATGTFDLGGMAGLSGSGPVARG----------AFALALLGFGMKAGVMPLH 220 Query: 240 AWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFP----NRLLLIFGML 295 WLP AH+ APS VSAL+S VL+ + L+R + D P LL+ G Sbjct: 221 FWLPGAHAAAPSHVSALMSGVLIKTGVYGLLRVTGLF------DAPPAAWGTALLVLGGA 274 Query: 296 SVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGI-------GGP----LGIFAALLHI 344 S + F L Q D+KRLLAY SVEN+G++ + G+ G P LG+ A LH+ Sbjct: 275 SAVLGVAFALAQHDLKRLLAYHSVENVGIIVLGAGLALLGRARGEPALVALGLGGAALHV 334 Query: 345 LNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 +NH+L K+LLF G+G V GTR+L+ + G+ + M TA LF GA A++G+PP N F+ Sbjct: 335 VNHALFKSLLFLGAGAVQHATGTRELDQLGGLARPMRATATLFLVGAAAISGLPPLNGFV 394 Query: 405 SEFM 408 SE++ Sbjct: 395 SEWL 398 >UniRef50_B6YTX9 Hydrogenase 4, component F or formate hydrogen lyase, subunit 3 n=3 Tax=Thermococcus RepID=B6YTX9_THEON Length = 522 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 130/434 (29%), Positives = 215/434 (49%), Gaps = 39/434 (8%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF---HLFL 123 G+ +D + LF + + FL IYS Y+ HE L YY + L Sbjct: 73 GIIYEVDRMSALFALVTAALMFLIAIYSYRYLEHEEG--------LEWYYTLYLGLEAGL 124 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVA----- 177 +LL + NL VM IE T++++ LV Y R S+ A KY I +G Sbjct: 125 LGVLLTGDAFNLFVM---IEVTSIAAYALVMFYRDRGDSICAGLKYAFIGALGTTMYFLA 181 Query: 178 ----FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 +G FGT L AN ++++ I + + L L + FL+ K Sbjct: 182 LGTLYGAFGT-LNMANLSALIHGLSFPIAGTTYGNIAIASGVALALATWAFLI-----KA 235 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRY-YIIICQAIGSDFP------N 286 + P H WLP+AH APSP+SA+LS +++N + LIR+ Y + + + Sbjct: 236 AIVPNHFWLPEAHPAAPSPISAILSGLVVNVGVYSLIRFLYTVYGGEVSGSLGGVIHALS 295 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 +L++ G +S A + QRD+K+L+AYS++ +MG +A+ +G+G L + AA HI+N Sbjct: 296 VILIVLGAVSALFGALMMNAQRDVKKLIAYSTIMHMGYLAMAVGVGTQLALQAAAFHIIN 355 Query: 347 HSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 H++AK LLF +G + G+RD++ + G+ + MP L+L G+PPFN+F S+ Sbjct: 356 HAIAKALLFLAAGAFIHAVGSRDISDLAGLGRQMPVATFGLAIATLSLVGIPPFNVFFSK 415 Query: 407 FMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMV 466 + A + + L +VL+L + + L VR+ + + KP + + G + + ++ Sbjct: 416 LLLFNAFMEESPALALVLVLSSV-IALVAYVRVFQEIWLGKPRENTTIREHGSM-SGVLL 473 Query: 467 ILLVMMLAMGTHIP 480 IL V+ L +G P Sbjct: 474 ILAVICLLLGLFAP 487 >UniRef50_B8DNI8 NADH dehydrogenase (Quinone) n=4 Tax=Desulfovibrio vulgaris RepID=B8DNI8_DESVM Length = 1264 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 143/466 (30%), Positives = 219/466 (46%), Gaps = 54/466 (11%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML---- 127 ID L LF I+ IG + +YS GY+ H+ G Y FF L + L Sbjct: 278 IDPLSRLFGVIIAGIGLVVAVYSTGYIHHDRRAGG---------YWFFLLLMCGSLSGLA 328 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVY 187 L V W E T SS FLV + AA KY ++C G L G +L+ Sbjct: 329 LARDFGGFYVFW---ELMTFSSYFLVAHEATDKAFHAAVKYFVMCVAGACAMLPGFMLLS 385 Query: 188 ANAASVMPQAEMAIFWS---EVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 A A ++ A + + V+K + ++LAFV GF K GL P H WLPD Sbjct: 386 AQAGTLDFAALAGLAATLPAPVVKGA-------VVLAFV----GFAVKAGLVPGHGWLPD 434 Query: 245 AHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAI--------GSDFPNRLLLI--FGM 294 AH APS +S LS +L + +R + + + F + LL+ G Sbjct: 435 AHPAAPSSISGPLSGILTKTGVYGTVRLMLAVFGSAVLLKAGESAGGFSSMGLLVTALGT 494 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLL 354 ++ L Q D+KRLLAYS++ +G + + +G+G L +LLH+LNH++ K LL Sbjct: 495 ATMLYGELMALKQDDLKRLLAYSTMGQVGEIFMVIGLGTWLATTGSLLHVLNHAIMKNLL 554 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 F +G ++L+ G++ L + GM ++MPFTA G +++ G+PPFN F+ +++ + A + Sbjct: 555 FLCAGGLILRAGSKKLADLAGMARVMPFTAGCMVVGLISIMGLPPFNGFVGKYLMLQALV 614 Query: 415 ARNHLLIIVLLLLLLTLVLAGLVRMA--ARVLMAKPPQA--VNRGDLGWLTTSPMVILLV 470 A H + +LLL LAG V R L+ +P V + + ++ L Sbjct: 615 AAGHPAVAAVLLL---GSLAGCVYYMRIVRTLVFQPYTGPMVQEAPVSMRVATGVLAALC 671 Query: 471 MMLA----MGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFL 512 ++L +G + PV +LAGA + LP TWH F+ Sbjct: 672 LVLGVLPQLGLSLVTPVADMLAGAGKL---DAQALPMLAVTWHPFV 714 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 111/410 (27%), Positives = 195/410 (47%), Gaps = 31/410 (7%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 +D + F ++ VIG L Y++GYM H H T +Y FF + ++ V Sbjct: 756 LDSISFAFALVVPVIGCLNMFYAVGYMEHS--H------TQWRFYTFFLFMVGGLMGVAA 807 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVYANA 190 SN+L + E + S + V ++ + ++L +KY +G AF G V++ + A Sbjct: 808 SNDLFGFFTFWEIMSSWSLYFVIVHEENPAALREGFKYFFFNVLGAAFLFLGVVMLSSMA 867 Query: 191 ASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAP 250 P + V + L A + IGF K P + + AP Sbjct: 868 GD--PS------FGAVRSALPTMPVALAATAVALMAIGFTMKAAQLPFRIDVQMHPATAP 919 Query: 251 SPVSALLSAVLLNCALLVLIRYYIIICQA-----IGSDF--PNRLLLI--FGMLSVAVAA 301 +PVS +S+VLL AL L + + ++ A + S + P + I G +++ +AA Sbjct: 920 TPVSGYISSVLLKSALFGLAKLFFVLGGAGFFTGLASQWGQPQVMYAIAWVGGITIVMAA 979 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 ++Q D+K +L YS+V +G + V + +G PLG+ +LH++NH L K LLF +G++ Sbjct: 980 LLAVMQSDLKLVLIYSTVSQLGYMVVGVALGTPLGMAGGMLHLVNHVLFKDLLFLVAGSL 1039 Query: 362 LLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLI 421 +L L+ + G+ + MP T +F GAL++ G+PP N F S+++ A +A + + Sbjct: 1040 ILCTHKHSLDELGGIGQRMPVTLTMFAIGALSVVGVPPTNGFASKWILYHALMAEGEVAL 1099 Query: 422 IVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVM 471 +L L L LA + + +P +L + +P ++L+ M Sbjct: 1100 ALLSLAGSVLTLAYFAKFLHSAFLGRPSP-----ELAHVHEAPRIMLVPM 1144 >UniRef50_D2LP95 NADH/Ubiquinone/plastoquinone (Complex I) n=3 Tax=Aciduliprofundum boonei T469 RepID=D2LP95_9EURY Length = 448 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 115/344 (33%), Positives = 179/344 (52%), Gaps = 31/344 (9%) Query: 69 WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL--FLFTM 126 WL++D + + I+ T IY + V + + YG+ L F TM Sbjct: 58 WLYVDFVTKVMFLII------TMIYLFAALHANVCMRNIKRFFISPNYGWSLLAGFTLTM 111 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLV 186 LL V++ +L W +EA+T+ SA L+ + ++S +E+AW+Y++I + G+A GLF ++++ Sbjct: 112 LLAVSTPSLGYAWLWLEASTVISAALILMEKEKSHVESAWRYVLIASSGLAIGLF-SIIL 170 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 Y I + +LL +L L IGFGTK GLFPMH WLPDAH Sbjct: 171 YGGITGGFTWVNATI------SKGALLVGSLAL-------IGFGTKAGLFPMHTWLPDAH 217 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFP-NRLLLIFGMLSVAVAAFFIL 305 APSPVSALLS LL +L+V R Y + P L I G+L++ VA+ ++ Sbjct: 218 GTAPSPVSALLSGALLPSSLIVFYRIY-----GVMHSLPLFYLTAILGILTIWVASLLMI 272 Query: 306 VQRDIKRLLAYSSVENMGL--VAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLL 363 Q+ KRL AYSS++ MG+ V + L P I+ L+ L H+ K+ LF +G L Sbjct: 273 SQKRTKRLFAYSSMDVMGIATVGISLTYFYPSAIYFVLVVFLAHAFGKSALFLSAGT-LK 331 Query: 364 KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 ++G +++ + +++ + AL + G PPF +F EF Sbjct: 332 RHGKEEISEIRNLIETSKTLSFAILVSALTVTGAPPFAMFFGEF 375 >UniRef50_C5A4P9 Membrane bound oxidoreductase, MbxH subunit (MbxH1) n=9 Tax=Thermococcaceae RepID=C5A4P9_THEGJ Length = 495 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 106/363 (29%), Positives = 189/363 (52%), Gaps = 23/363 (6%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 G+ L++ LF+ I+ ++ F ++S+ + E P+ D Y LFL M Sbjct: 72 GINLYVGPFAALFVLIVAIMSFFMAVFSLKAVETE-------PI---DKYAM--LFLLLM 119 Query: 127 LL---VVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGT 183 L ++ + ++ ++ +E T++++ L + EA+ KY+++ +G +F L G Sbjct: 120 LGSTGMIATGDIFNLFVFMEITSITAYALTAYNKTGEAAEASLKYMVLGGIGSSFFLIGV 179 Query: 184 VLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLP 243 L+Y A + A +A + + ++PT+ + L+ G + LFP++AW P Sbjct: 180 ALIY-GATGTLNMAHIA-------QLAGGINPTVAQIGLALLIFGLAVEAELFPLNAWAP 231 Query: 244 DAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFF 303 DA+ AP P++A+ SA ++ L R I+ A G ++++I L+V VA F Sbjct: 232 DAYQAAPHPITAMFSAFVVKAGLYAAARLLYIMQNASGWGSVLKMVVIMAALTVFVAEFS 291 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLL 363 L QRD+KR++AYSS+ +G++A L +G G+ A + H++NH++ K LLF G V + Sbjct: 292 ALRQRDVKRMIAYSSISQVGMIAFALALGTQAGVEAGVFHMINHAIVKALLFLAVGYVGI 351 Query: 364 KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIV 423 G + G+ + MP TA + G+LA G+P FNIF S+ + AG+ + + Sbjct: 352 TLGGTGIEKFSGLGRRMPLTAFVITVGSLAAVGIPLFNIFWSKIRILIAGVEAGYTWGVA 411 Query: 424 LLL 426 L+L Sbjct: 412 LIL 414 >UniRef50_Q73G56 Na+/H+ antiporter subunit, putative n=9 Tax=Wolbachia RepID=Q73G56_WOLPM Length = 488 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 125/417 (29%), Positives = 223/417 (53%), Gaps = 32/417 (7%) Query: 9 LLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILA-LWVVQTAADAGEIFAA- 66 L ++ P++ S+ CF +K ++S + + T+ LI++ + +++T GEI Sbjct: 6 LQVIIPIIASMFCFLAKKHKVSW-----FISFIATTITLIISSILLIKTYK--GEIITYH 58 Query: 67 --------GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 G+ L ID L L L ++ I ++ +YS E++ +++ +Y Sbjct: 59 LGNWAPPYGIELRIDVLNSLILTLVNFIALISVLYSFYINEKEISKNKIT-----GFYSL 113 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAF 178 F L L +L ++ +N++ ++ +E ++LSS LV + + +L AA++Y+I T+G F Sbjct: 114 FLLCLSGLLGILVTNDIFNLYVFLEISSLSSYVLVSMGRDKKALVAAFEYLISGTIGATF 173 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 LFG L+Y+ + + ++MA + L D ++ L +F+ IG K LFP+ Sbjct: 174 YLFGIGLLYSMTGT-LNMSDMA------ERIVPLHDNNIIKLGTLFIFIGLSIKMALFPL 226 Query: 239 HAWLPDAHSEAPSPVSALLSAVLLNCALLVLIR-YYIIICQAIGSDFPN--RLLLIFGML 295 WL +A+SEAPS +S S + + V IR +Y + Q P+ +++I + Sbjct: 227 SRWLVNAYSEAPSFISIFFSGTVAKVMIYVFIRIFYTVFHQNFFLFKPSLSNVIIILALC 286 Query: 296 SVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLF 355 +V + F + +DIKRLLA+SS+ +G + + L G+FAA+LHI+NHS+ KT LF Sbjct: 287 AVIFGSIFAITAKDIKRLLAHSSISQIGYIILALSFNSKTGVFAAILHIVNHSIIKTSLF 346 Query: 356 CGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 +G + K+ T + + G+ K MP+TA+ F +LAL G+P N F+S++ + A Sbjct: 347 MAAGCISYKFDTTKIENLSGLKKSMPYTALAFTLLSLALIGVPLTNGFVSKWYIMKA 403 >UniRef50_Q2RXM5 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM5_RHORT Length = 674 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 140/467 (29%), Positives = 226/467 (48%), Gaps = 35/467 (7%) Query: 46 LLILALWVVQTAADAGEI----FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHE 101 L + AL V A D G + + L IDGL +F+ ++ V+G + +YS+GY+ H Sbjct: 49 LAVTALTVGPIAFDLGTVPLFGLTSSLAFTIDGLSAIFVILISVLGTASALYSVGYIAHY 108 Query: 102 VAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RS 160 YY F LF+ ML+V T+++ + E TL S FLV + + Sbjct: 109 PDEDARR------YYVPFPLFIAGMLMVATTSDWFCFFFGWEFMTLVSYFLVTFENRDKE 162 Query: 161 SLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLL 220 +L A + Y + + + GL ++V A +A + L +P + Sbjct: 163 NLSAGFIYFFMTQL-TSMGLMLAIIVLGTWGGSTSFAAVA----KTLGALQAENPVALYG 217 Query: 221 AFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYI-IICQA 279 IGF TK G+FP+ WLP AH AP+ VSALLS V++ + ++R ++ + Sbjct: 218 LLSLFFIGFATKAGMFPLGIWLPKAHPAAPASVSALLSGVMIKLGIYGMLRIFLWALPLG 277 Query: 280 IGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG------- 332 + ++ +FG+LS+ V L + D KRLLA S+ MG V + LG+G Sbjct: 278 EATHVWGMVITLFGVLSMLVGTLRALGEHDCKRLLAQHSIGQMGYVLLGLGLGLTFLGSN 337 Query: 333 ---GPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGG 389 LG L H++NH+ K+LLF +G++L + GTRDL+ + G+ +MP TA Sbjct: 338 PLFAALGFLGCLYHLINHACFKSLLFFNTGSILYRAGTRDLDSLGGLSAVMPLTAGCALV 397 Query: 390 GALALAGMPPFNIFLSEFMTITAGLARN-----HLLIIVLLLLLLTLVLAGLVRMAARVL 444 GAL++AG PPFN F+S+++ + + + ++L V+ + + T+ LA V+ Sbjct: 398 GALSIAGTPPFNGFVSKWLLYQSAIFGDVSTPVYILAAVVAIFIGTVTLASFVKYMGTAY 457 Query: 445 MAKPPQAVNRGDLGWLTT--SPMVILLVMMLAMGTHIPQPVIRILAG 489 + P+ G + + V L V+ L MG P PV+ L G Sbjct: 458 LGTLPKRFVGSGFGCPRSMEAVEVFLAVVCLVMGV-FPGPVVATLLG 503 >UniRef50_B2A3T0 NADH dehydrogenase (Quinone) n=2 Tax=Clostridia RepID=B2A3T0_NATTJ Length = 500 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 122/428 (28%), Positives = 211/428 (49%), Gaps = 29/428 (6%) Query: 9 LLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAAD------AGE 62 L++L PL+ + + F ++ + ++V+ S IT L++ A++ V + A Sbjct: 13 LIVLFPLIMTGVIFLVEQKSIFGRNLLSVVTS-AITFLMVAAMYPVVIKGEVIYYQLANL 71 Query: 63 IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 I G+ +D LG + I L IYS+ YM+ E G P G LF Sbjct: 72 IPPFGISFMVDTLGFGLSLLASFIWMLVTIYSLEYMKKENYTGRYYPALSLTLSGSMGLF 131 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFG 182 L + +L M+ E +L S L+ + +L A +KY+I+ +G F FG Sbjct: 132 L--------AGDLFTMFIFFEIMSLVSYLLIIHNETKEALRAGYKYLIVTIIGGLFLFFG 183 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLA-FVFLLIGFGTKTGLFPMHAW 241 ++ + + ++ +EM I + PT + A F+ +IGFG K G+ P+H W Sbjct: 184 IIITFELSQTIT-LSEMGIIST----------PTSLAFAGFLSFVIGFGMKAGMVPLHIW 232 Query: 242 LPDAHSEAPSPVSALLSAVLLNCALLVLIR--YYIIICQAIGSDFPNRLLLIFGMLSVAV 299 LP+AH APSP SALLS +++ LIR +++ Q I + +L + ++++ + Sbjct: 233 LPEAHPVAPSPASALLSGIMIKTGAYGLIRIMFHVFDYQMILEANWHLILAVVAVITIFL 292 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 + + Q D+KR LAYSS+ MG + + L I + + HI +H+ K+ LF +G Sbjct: 293 GSAVAITQEDLKRRLAYSSIGQMGYILLGLAILTETAMTGDIFHIFSHAFMKSTLFLAAG 352 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 +++K G + + + G+ + MP T + F ALA+ G+PP N F+S++ L Sbjct: 353 AMIMKTGKKKIADLKGVGRAMPLTMLSFTIAALAMIGIPPLNGFISKWSLSLGALEAGQP 412 Query: 420 LIIVLLLL 427 +V+LL+ Sbjct: 413 YYVVILLI 420 >UniRef50_C7LSU3 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria RepID=C7LSU3_DESBD Length = 577 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 115/353 (32%), Positives = 182/353 (51%), Gaps = 32/353 (9%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 + +D + FL +L V+G YS Y + P + ++ L +M +V Sbjct: 1 MRLDAISAFFLLLLAVVGASGAFYSRTYWSQKK-----HPRSARQSRLWWSAMLASMGMV 55 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 +T +N + A E+ LS+ FLV + + AA + ++ + LFG + + Sbjct: 56 LTQSNGLHFLFAWESFALSAYFLVTLERDNPKVRAAGRLYLVASHAGTLALFG---FFTS 112 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 A+ E+ + Q+SL F L+GFG K G+FP+H WLP AH+ A Sbjct: 113 LAAQTGSWELG----PMTSQTSLAP------LFWVALLGFGIKAGVFPLHIWLPSAHANA 162 Query: 250 PSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRD 309 PS VSA++S V + + L+R+ + G+ + ++ G +S + F L Q D Sbjct: 163 PSHVSAIMSGVAIKMGIYGLVRFSSWLPLPAGAGW---VVAGLGCVSAVLGVAFALGQHD 219 Query: 310 IKRLLAYSSVENMGLVAVELGI-------GGP----LGIFAALLHILNHSLAKTLLFCGS 358 +KRLLAY SVEN+G++ + LG G P L + LLH+ NH L K LLF G+ Sbjct: 220 VKRLLAYHSVENIGIILIGLGFAMIALDQGRPEWGLLALSGGLLHVWNHGLFKALLFLGA 279 Query: 359 GNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 G VL GTR+++ + G+ K MP+TA LF GA+A++G+PP N F+SE++ + Sbjct: 280 GAVLHSTGTREMSRLGGLWKTMPWTAALFTLGAMAISGLPPLNGFVSEWLIFS 332 >UniRef50_B8I2P9 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Clostridium RepID=B8I2P9_CLOCE Length = 688 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 136/445 (30%), Positives = 226/445 (50%), Gaps = 51/445 (11%) Query: 9 LLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWV---VQTAADAG-EIF 64 +L +T L SL ++ K + + +L S +T L+I L V T D I Sbjct: 15 VLYMTGALTSLASYSSPKWSNRLSNSFALLASSLLTFLMIYKLIYSRDVSTKLDFNTNIP 74 Query: 65 AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLF 124 + +ID L F+ I+ ++ + ++S YM H + +S V C Y +LF+ Sbjct: 75 FLSIEFNIDSLSAFFIMIISIVAVIVSLFSYTYMSHYFSKKNIS-VFGCLY----NLFIV 129 Query: 125 TMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWK-YIIICTVGVAFGLFGT 183 +M+L+V S+N+++ E +L S FLV ++ ++ A + YII+ +G + Sbjct: 130 SMVLLVASSNMLLFLVFWELMSLISFFLVIYEHEKDEVQKAGRIYIIMTYIGTVCIMAAF 189 Query: 184 VLVYA-----NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 VL+ A N +S+ PQ+ + + F+ LL+GFGTK G+ P+ Sbjct: 190 VLIAAYTGSFNLSSINPQS---------------IPHGSANIIFLLLLVGFGTKAGIIPV 234 Query: 239 HAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 H WLP AH APS +SAL+S V++ A+ L R+ I G + +L I G+ S Sbjct: 235 HIWLPYAHPVAPSNISALMSGVMIKMAIYGLFRFIFNILPVSGLWWGVAVLCI-GIASAL 293 Query: 299 VA-AFFILVQRDIKRLLAYSSVENMGLVAVELGI--------GGPLGIFAALL---HILN 346 + A+ + +IKRLLAYSS+ENMG++ +G+ PL + H LN Sbjct: 294 IGIAYSVASTTNIKRLLAYSSIENMGIILAGIGMMMIARASENYPLLSLSLTATLLHTLN 353 Query: 347 HSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 H++ K+LLF G+G + T+++ + G++K MP +V G L+++ +PPFN F+SE Sbjct: 354 HAVFKSLLFMGAGTIQYSTHTKNMEKLGGLIKKMPAASVFIFIGCLSISAVPPFNGFISE 413 Query: 407 FM---TITAGL-----ARNHLLIIV 423 FM TI + + + N LL+++ Sbjct: 414 FMIFRTIISSISYFAPSENFLLVVI 438 >UniRef50_B8FUM3 NADH dehydrogenase (Quinone) n=3 Tax=Desulfitobacterium RepID=B8FUM3_DESHD Length = 637 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 159/513 (30%), Positives = 248/513 (48%), Gaps = 56/513 (10%) Query: 33 RTVTVLHSLGITLLLILAL-WVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTG 91 R T+ SL I +L IL L W +G+ G DGL FL +L + + Sbjct: 9 RVGTMGLSLMIAILGILFLGWNFHMDNFSGQWHGEGF--SCDGLTAFFLLVLLLGQGIAS 66 Query: 92 IYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNN---LIVMWAAIEATTLS 148 +Y +GYM+ L +L + FL +M V+ NN + +W E +L Sbjct: 67 LYGLGYMKDYEGKRSLLSFSLS-----WAAFLGSMAGVLIVNNGFYFLFLW---ELMSLF 118 Query: 149 SAFLVGIYG--QRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEV 206 S FL+ IY + S+ AA+ Y ++ VG F + + +Y+ S + AI Sbjct: 119 S-FLLVIYEHEESSNRRAAFIYFVMTHVGTVFLIAAVLYLYSKTGSFLYGDWAAI----- 172 Query: 207 LKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCAL 266 + L P F+ LIGFGTK GL P H WLP AH APSPVSAL+S V++ AL Sbjct: 173 ---TPTLSPGEKNGLFLCFLIGFGTKAGLVPFHIWLPYAHPVAPSPVSALMSGVMVKIAL 229 Query: 267 LVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVA 326 +++R ++ + A + L+L G+LS + + V++D+KRLLAYS+VENMG++ Sbjct: 230 YMMMR-WVWLTLAPMELWWGGLMLALGVLSAFIGILYACVEQDVKRLLAYSTVENMGILT 288 Query: 327 VELG---IGGPLG--------IFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCG 375 + LG I LG + A H ++H L K+ LF +GN++ T+ L+ + G Sbjct: 289 MALGTAMIARTLGYSDLVVLALAAFFWHGIHHLLFKSGLFMAAGNIIQATHTKRLDQMGG 348 Query: 376 MLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM----------TITAGLARNHLLIIVLL 425 +LK MP T + GA+ L+ +PP F E++ + GL + L + + Sbjct: 349 LLKKMPRTGLWAMVGAVGLSALPPLGGFWGEWLLFHALWKTSVQVEGGLFKLALPLSLAA 408 Query: 426 LLLLT-LVLAGLVRMAARVLM--AKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQP 482 L ++ L LA +V+ A + A+ A N +L W T M + +++ L + T PQ Sbjct: 409 LAFISALALATMVKWFAGAFLGQARSANAANAQELPWPQTVSMAMAMMLTL-LATLYPQG 467 Query: 483 VIRILAGASTIVLSGTHDLPAQRS----TWHDF 511 + ++++ VL T D P S W DF Sbjct: 468 LWKLIS-VPIHVLKDTSDSPLTDSLALPLWADF 499 >UniRef50_D0WGR4 Hydrogenase subunit n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WGR4_9ACTN Length = 675 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 126/407 (30%), Positives = 207/407 (50%), Gaps = 41/407 (10%) Query: 27 RRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA-------AGLWLHIDGLGGLF 79 + A + V L +G LL +LA + Q G + A L ++ + GL Sbjct: 25 KSAHAAKVVACLFGMGSALLAVLAGF--QGVIGQGACLSVATPFSFADFTLLLNPIAGLL 82 Query: 80 LAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMW 139 LAI+ V+ F +Y + Y +G L + L F +LF+ +M ++V ++N Sbjct: 83 LAIINVLAFAAFLYGLSYFDEYKENG-LGAMGL-----FMNLFIASMNVLVVADNAFWFL 136 Query: 140 AAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEM 199 E +L+S FLV + ++ S++ + Y+++ VG ++ Y AS E Sbjct: 137 VFFELMSLTSYFLVVVEQKKQSIKGGFMYLVMAHVG----FLMIMISYFIMASQTGSFEF 192 Query: 200 AIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA 259 A + + P L LAFV GFG K G+ P H+WLP AH APS VSAL+S Sbjct: 193 AAY------RVHDFGPALGSLAFVLAFFGFGCKAGMVPFHSWLPQAHPAAPSNVSALMSG 246 Query: 260 VLLNCALLVLIRYYIIICQAIGSD---FPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAY 316 ++ + +I+ + + G+D + L+L+ G +S + + L + DIK+LLAY Sbjct: 247 GMIKIGVFGIIKVGLDLLS--GTDCMLWWGLLVLVVGAVSSVLGVVYALGEHDIKKLLAY 304 Query: 317 SSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY 365 SVEN+G++ + +G+ L + A + H+LNH++ K LLF G+G+VL Sbjct: 305 HSVENIGIILLGVGLAFVGVAMDQPALAGLALLAGIYHMLNHAMFKGLLFLGAGSVLYAT 364 Query: 366 GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 GTR++ + G++ MP TA+ F G+LA++ +PP N F+SE+ T A Sbjct: 365 GTRNMEKMGGLIHAMPVTAMCFLIGSLAISAIPPLNGFVSEWFTYQA 411 >UniRef50_Q12F20 NADH dehydrogenase (Quinone) n=37 Tax=Betaproteobacteria RepID=Q12F20_POLSJ Length = 674 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 128/380 (33%), Positives = 193/380 (50%), Gaps = 47/380 (12%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGE-LSPVTLCDYYGFFHLFLFTMLL 128 L +D L FL ++G ++ GY R GE SP LC Y H+FL +M+ Sbjct: 83 LRLDSLSAYFLMVIGAASAGISAFAAGYFRK----GEGTSPGLLCLEY---HVFLASMVG 135 Query: 129 VVTSNN---LIVMWAAIEATTLSSAFLVGIYGQRSSLEAA-WKYIIICTVG-----VAFG 179 VV +++ +VMW E LSS FLV + + +A + YI + +G + FG Sbjct: 136 VVLADDAYSFMVMW---ETMALSSFFLVTANHRIPEVRSAGYLYITMARIGAIAILLCFG 192 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 + A++ QA FW+ L F+ + GFG K G+ P+H Sbjct: 193 VLQANTGDYTFANMRAQAPTP-FWAS--------------LGFLLAVFGFGAKAGILPLH 237 Query: 240 AWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLP+AH APSPVSAL+S V+LN A+ L+R + + + LLL G+ + Sbjct: 238 VWLPEAHPAAPSPVSALMSGVMLNTAIYGLMRVSFDLLH-MRMWWWGGLLLAVGLATALF 296 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHS 348 F VQ D+KRLLAYSS+ENMGL+ V +G+ L + A L H+ +H+ Sbjct: 297 GVVFAAVQTDMKRLLAYSSIENMGLLFVGIGLTLIFSAYDMNPMAALAMTATLYHVASHA 356 Query: 349 LAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 K+LLF G+G+VL R+L + G+++ MP+ L G LA AG+PP F+SE++ Sbjct: 357 CFKSLLFLGTGSVLHATSERNLGKLGGLIRTMPWVGWLTLIGVLASAGLPPLGGFVSEWL 416 Query: 409 TITAGLARNHLLIIVLLLLL 428 + + L L + +L +L+ Sbjct: 417 LLQSFLFTPSLPLPLLTMLI 436 >UniRef50_Q2FKT7 NADH dehydrogenase (Quinone) n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FKT7_METHJ Length = 643 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 134/450 (29%), Positives = 228/450 (50%), Gaps = 45/450 (10%) Query: 4 SVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI 63 S +F ++L L ++ RK+R+ + ++ ++ GI L L +++ ++A I Sbjct: 2 SEIFLFIILLYALSGVIPLCIRKKRIWSVSSI-IMGGGGILLTLFSLPFLLVSSAKT--I 58 Query: 64 FAAGLW------LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 G W + ID L LF +LG++ +Y+ GY+ + HG + G Sbjct: 59 LFQGAWVTFPIRIGIDRLSALFCILLGLLSLAVALYTPGYL--DRMHGNRRTYVVS---G 113 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLV-GIYGQRSSLEAAWKYIIICTVGV 176 LFL +MLLV+ + +I E + S FLV + + + AA Y+ + + Sbjct: 114 LIPLFLLSMLLVIMAETVIAFLVFWELMAILSFFLVLTEFEEEKTRYAALFYLAMTQIST 173 Query: 177 AFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLF 236 F G +L+ S W + S DP L+ L+F+ L G K+G+ Sbjct: 174 VFVFLGILLIRLGTGS----------WEYPVHLSGS-DP-LISLSFLCLFFGIAIKSGVI 221 Query: 237 PMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFP-NRLLLIFGML 295 P H WLP AH APSPVSAL+S ++++ AL LIR ++ D L+L FG L Sbjct: 222 PFHKWLPHAHPAAPSPVSALMSGMMISTALYALIR---VVTGFYAPDAAWGFLILAFGCL 278 Query: 296 SVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIF-----------AALLHI 344 + + + L ++D+K LLAYSS++N G++ + +G+ +F A+ H Sbjct: 279 TAVLGVMYALKEQDLKGLLAYSSIDNTGIILIGIGLWVLFTVFGSQTLALMAIAGAVFHA 338 Query: 345 LNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 ++H L K LLF +G+V GTR+++ + G+L MP+T LF G L++A +PPF+ F+ Sbjct: 339 ISHGLFKGLLFLTAGSVCQAAGTRNIDEMGGILVRMPWTGGLFFIGVLSIASIPPFSGFI 398 Query: 405 SEF---MTITAGLARNHLLIIVLLLLLLTL 431 EF M++ GL+ L+ ++++++L+L Sbjct: 399 GEFLIIMSLIGGLSELSPLLQIVMVVVLSL 428 >UniRef50_Q9UYP1 Hydrogenase 4, component F or formate hydrogen lyase, subunit 3 n=1 Tax=Pyrococcus abyssi RepID=Q9UYP1_PYRAB Length = 499 Score = 154 bits (389), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 130/465 (27%), Positives = 235/465 (50%), Gaps = 52/465 (11%) Query: 42 GITLLLILALWVVQTAADAGEIFAAGLW-------LHIDGLGGLFLAILGVIGFLTGIYS 94 G+TL+ L+ + ++ ++ G W +D L L + V+ FL IYS Sbjct: 41 GLTLISTFKLFQLTYSSSLPIVYTFGKWRAPIGIVYEVDRLSSLIALVTAVLMFLIAIYS 100 Query: 95 IGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLL-VVTSNNLIVMWAAIEATTLSSAFLV 153 Y+ E ++Y +L L + LL V+ + + ++ IE T++++ LV Sbjct: 101 YRYLEREKG---------LEWYYTLYLGLESGLLGVLLTGDAFNLFVMIEVTSIAAYALV 151 Query: 154 GIYGQR-SSLEAAWKYIIICTVG---------VAFGLFGTVLVYANAASVMPQAEMAIFW 203 Y R S+ A KY +I VG V +G FGTV +A+ + + + + Sbjct: 152 MFYRDRKDSVLAGLKYALIGAVGTTMYFLALGVFYGTFGTV-NFADLSEKLHSSGNVVLA 210 Query: 204 SEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLN 263 S V L+L + FL+ K +FP H WLP+AH APSP+SA+LS +++N Sbjct: 211 SSV---------ALVLATWAFLI-----KATIFPNHFWLPEAHPAAPSPISAILSGLVVN 256 Query: 264 CALLVLIRY----YIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSV 319 + +IR+ Y + IG + + ++I G +S A + QRD+KRL+AYS++ Sbjct: 257 VGVYAMIRFLYTLYSGLSWIIG--WLSFAIIILGAISSIFGALMMNTQRDVKRLVAYSTI 314 Query: 320 ENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKI 379 +MG + + +G+G LG+ AAL H++NH++AK LLF G + G+R+++ + G+ + Sbjct: 315 MHMGYLLMAVGVGTQLGLQAALFHLINHAIAKALLFLAVGVFIHVAGSRNIDDLAGLGRK 374 Query: 380 MPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRM 439 MP T L+L G+PP N+F S+ + A L ++ L +V+ + + + L +R+ Sbjct: 375 MPITTFSLAIATLSLVGIPPLNVFFSKLLLFNALLEKSFFLALVIAVTSV-IALVAYMRV 433 Query: 440 AARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVI 484 + + KP + + D+ + M+ L++ ++ + + P++ Sbjct: 434 LYTLWLGKPREDL---DVKESISMSMICLILALICIAIGLIAPIV 475 >UniRef50_A9QPJ4 Formate hydrogenlyase subunit 3 n=1 Tax=Methylacidiphilum infernorum V4 RepID=A9QPJ4_METI4 Length = 667 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 107/358 (29%), Positives = 187/358 (52%), Gaps = 31/358 (8%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 G ID L FL ++ + F+ +Y +GY H + P F+ LFL +M Sbjct: 68 GAHFRIDSLSAFFLLVVNLASFMASLYGLGYGSHFAEQQRILP--------FYILFLGSM 119 Query: 127 LLVVTSNNLIVMWAAIEATTLSS-AFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVL 185 +V+ + ++ E +LSS A ++ + ++ + A + Y+++ +G LF L Sbjct: 120 NMVLLAADMFSFLFFWELMSLSSWALVMSSHKEKETAGAGFIYLLMAVLGTFALLFSMSL 179 Query: 186 VYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDA 245 + +++ + F E + +++L + L+ F L G G+K GL P+HAWLP A Sbjct: 180 LASHSGT---------FSFEGMSKAALPSKSASLV-FALALFGAGSKAGLVPLHAWLPRA 229 Query: 246 HSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFIL 305 H APS VSAL+S V+ A+ +R + + + + LLL+ +S+ + L Sbjct: 230 HPAAPSHVSALMSGVMTKVAVYGFLRIVFDLLRT-QEKWWSYLLLVIAGVSMIAGVLYAL 288 Query: 306 VQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALL-----------HILNHSLAKTLL 354 +Q D+KRLLAY ++EN+G+V V +G+ + + H+LNHSL K LL Sbjct: 289 MQHDLKRLLAYHTIENIGIVFVGIGLAMAFKTYGMVAASALSFSASLFHVLNHSLFKNLL 348 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 F G+G++ G+RD+ + G++ MP+TA F G++A+ +PP N F+SE++ + + Sbjct: 349 FLGAGSIQSSTGSRDMEKLGGLVSKMPYTAFAFLMGSMAICALPPLNGFVSEWLLMQS 406 >UniRef50_Q0ARA4 NADH dehydrogenase (Quinone) n=3 Tax=Hyphomonadaceae RepID=Q0ARA4_MARMM Length = 507 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 126/442 (28%), Positives = 222/442 (50%), Gaps = 24/442 (5%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 G+ +D L L ++G++GFL IY++ + E+A + + +Y F + + Sbjct: 80 GIEYRVDMLNIPLLLVVGIVGFLCVIYALPSVADEIAENKQAL-----FYSAFLVCFAGL 134 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLV--GIYGQRSSLEAAWKYIIICTVGVAFGLFGTV 184 L V + + ++ +E +++S+ ++ G R +L A++ Y+I+ T+G F + G Sbjct: 135 LGVTITGDAFNVFVFLEISSISTYVIIAMGAGKDRRALTASYNYLILGTIGATFFVIGVG 194 Query: 185 LVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 +Y A + A+MA +L+++ + AF F+++G G K +FP+H WLP+ Sbjct: 195 FLYM-ATGTLNMADMA----AILEETG--HNRVTQAAFAFIVVGLGLKAAMFPLHLWLPN 247 Query: 245 AHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQA----IGSDFPNRLLLIFGMLSVAVA 300 A++ AP+ V+A L++ A LIR+ + + F L + G +++ VA Sbjct: 248 AYAFAPNFVTAFLASTATKVAFYALIRFLFSVFHPDVSFVSMSF-TWLFAVVGTIAMVVA 306 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 + + Q D +RLLAYSSV +G + + LG+G G+ A LLH++NH+L K LF G Sbjct: 307 SLQAVFQTDARRLLAYSSVAQVGYMMLGLGMGTASGLSAGLLHLMNHALMKGALFMALGA 366 Query: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 L +G R + + GM K MP +A F L+L G+P F S++ +TA L R Sbjct: 367 FALNFGVRRVKDLAGMSKTMPASATAFTIAGLSLVGVPLTVGFTSKWYLVTAALERGWWW 426 Query: 421 IIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLGWLTTSPMVILLVMMLAMG 476 + L+L L LA + R+ + + M PP + + R W+ PM L + + Sbjct: 427 AVAALMLSSLLALAYVARLLSAIWMDAPPSHHGELMQRRLAPWMVLVPMSFLALANVYFF 486 Query: 477 THIPQPVIRILAGASTIVLSGT 498 H P++ + A+ V+ G Sbjct: 487 FH-ADPLVWLARSAAEAVMGGN 507 >UniRef50_A7I7D4 NADH dehydrogenase (Quinone) n=3 Tax=Methanomicrobia RepID=A7I7D4_METB6 Length = 649 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 134/413 (32%), Positives = 199/413 (48%), Gaps = 55/413 (13%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 ID L FL ++G + +Y GY+ G + + C LF+F M LVV Sbjct: 77 IDRLAAFFLVLIGAVSACVAVYCTGYIEEMEGAGRRNILCGCT-----ALFVFAMALVVA 131 Query: 132 SNNLI---VMWAAIEATTLSSAFLVGIYGQRSS--LEAAWKYIIICTVGVAFGLFGTVLV 186 S I + W + A + FL+ +Y S A Y ++ + F + G +L+ Sbjct: 132 SATTISFLLFWELMAAVS----FLLVMYDYTGSETTRAGIFYFVMTQLSTLFVMLGIILL 187 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 + S AI + V S L+ AF+ L +GF K G+ P H WLP AH Sbjct: 188 FFATGS------FAIAPAHVTAGSL----PLVTAAFLALFVGFSVKAGIIPFHKWLPYAH 237 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPN----RLLLIFGMLSVAVAAF 302 +PSPVSAL+S V+L A+ LIR+ + + P+ ++LI G+ S + Sbjct: 238 PASPSPVSALMSGVMLKVAVYGLIRFLVAVFT------PDLWWGMVILIAGITSAVLGVI 291 Query: 303 FILVQRDIKRLLAYSSVENMGLVAVELGI-------GGPL----GIFAALLHILNHSLAK 351 + + + DIK LLAYSS+EN+G++ V +G+ G P+ + AAL H LNH+L K Sbjct: 292 YAIKEDDIKGLLAYSSIENIGIIFVGIGLFVIFSCTGLPMLATISLLAALFHSLNHALFK 351 Query: 352 TLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 +LLF SG+V+ TRD+ + G+ MP T+ LF GA A+A +PP N F SE + T Sbjct: 352 SLLFLTSGSVVHATHTRDIEQMGGLASRMPVTSALFFVGAAAIAALPPLNGFASELLVYT 411 Query: 412 AGLAR--------NHLLIIVLLLLLLTLVL--AGLVRMAARVLMAKPPQAVNR 454 A LL + L L LT L A V+ + +A+P +R Sbjct: 412 AFFESVTVADPLIKILLFVCLALFALTSALSAACFVKAFGSIFLARPRSQESR 464 >UniRef50_A3VPH5 NADH dehydrogenase/oxidoreductase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VPH5_9PROT Length = 501 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 118/397 (29%), Positives = 207/397 (52%), Gaps = 31/397 (7%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYS--IGYMRHEVAHGELSPVTLCDYYGFFHLFLF 124 G+ ID LG L +A++ +GI + + + R +A E S V YG + + Sbjct: 71 GIVYRIDVLGALVMALI------SGIAAAVLPFARQSLAR-ETSAVQSSHIYGMILVSVA 123 Query: 125 TMLLVVTSNNLIVMWAAIEATTLSSAFLV--GIYGQRSSLEAAWKYIIICTVGVAFGLFG 182 +L VV + + ++ +E ++LS+ LV G R +L AA+ Y+++ T+G F + G Sbjct: 124 GLLGVVATGDAFNLFVFLEISSLSTYTLVAMGARQDRRALTAAFTYLVLGTIGATFFVIG 183 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 L+Y QA + ++ ++ S D ++ F F++ G K +FPMH WL Sbjct: 184 IGLLY--------QATGTLNMIDLHERLSGQDDRVVRAGFAFVVTGLALKLAMFPMHRWL 235 Query: 243 PDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNR-----LLLIFGMLSV 297 PDA++ APS V+A+L+A A+ L+R+ + G FP LL+ FG+ + Sbjct: 236 PDAYTFAPSVVTAILAATSTKAAIYALMRFLFTV---FGFTFPFLETALFLLMAFGLAGM 292 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 +A+ + + D+K++LA+SSV +G + + + I G+ A+++H+ NH+L K LF Sbjct: 293 VIASLIAVFRDDVKQILAFSSVAQVGYMLLGISIATSDGVSASIVHVFNHALMKAALFMA 352 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 G V G+ + G+ K MPFTA F L+L G+P F+S+++ I A LA Sbjct: 353 VGAVFYAVGSHRIAAYRGLFKTMPFTACCFISAGLSLIGVPFTAGFVSKYVLIEAALAAT 412 Query: 418 ----HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ 450 LL++ +++ + +A + R+A +L+ PP+ Sbjct: 413 LPVPSLLLVGFVVVSSLIAVAYVGRVAYAILLDPPPE 449 >UniRef50_B6WWH3 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WWH3_9DELT Length = 670 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 132/392 (33%), Positives = 199/392 (50%), Gaps = 27/392 (6%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L +D L +FL + +GF+ +RH A S L ++ F+ L + M +V Sbjct: 77 LGLDALSRVFLLPVFGLGFVCACAGGISLRHTRA----SEHNLAAHWLFYLLLVLGMAVV 132 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 + + + ++ A E +LS FL+ R+ +A+W Y++ +G L L++ Sbjct: 133 MMARDAVLFLLAWEVMSLSPFFLIDFNDSDRNVRDASWVYLVAAHLGAVLLLAFFGLLWQ 192 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 NA A +A+ V+ +S+L FV L+GFG K G+ PMH WLP+AH Sbjct: 193 NAGDTA-FAVLALKEGPVVPLASVL--------FVLSLLGFGAKAGIAPMHVWLPEAHPA 243 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQ-AIGSDFPNRLLLIFGMLSVAVAAFFILVQ 307 APS +SALLS ++N L +IR + + + L L G+ + + L Q Sbjct: 244 APSHISALLSGAMINAGLYGIIRSCEFVAPLSAAPAWWGWLTLFLGLGTALMGILKALAQ 303 Query: 308 RDIKRLLAYSSVENMGLVAVELG---IG--------GPLGIFAALLHILNHSLAKTLLFC 356 ++KRLLAYSSVENMGL+ + +G IG G LG+ A+ H+LNHS K LLF Sbjct: 304 SNLKRLLAYSSVENMGLMLMGVGAWLIGSHSGNSWIGTLGLAGAMFHMLNHSAFKGLLFL 363 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 +G VL GT + ++ G+ + MP FG GA+++A PPFN F EF+ + L Sbjct: 364 TAGEVLHATGTVRMELLGGLQQRMPLVGAAFGIGAVSIACFPPFNGFAGEFVLALSLLDG 423 Query: 417 NHLLIIVLLL-LLLTLVLAGLVRMAARVLMAK 447 + L + L LL+ LV+ GLV A AK Sbjct: 424 SSLPGVEQQLGLLMALVVLGLVSGLAAATYAK 455 >UniRef50_B5YKQ6 Na+/H+ antiporter subunit, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKQ6_THEYD Length = 485 Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 120/444 (27%), Positives = 217/444 (48%), Gaps = 21/444 (4%) Query: 11 LLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWL 70 + P L SL+ F K+R + + + S+ + + + W +D + + Sbjct: 12 FIAPSLASLIVFLFGKKRF--IKELISILSISLAIFSTASCWNALNLSDKKALLLTQTF- 68 Query: 71 HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFT---ML 127 +IDG + ++ + + +YS Y+ +H + +++ ++ + L + M Sbjct: 69 YIDGFSIIMQLMVEFVALMVILYSSAYISKAYSHRK------ENFHIYYSVILLSTGFMN 122 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVY 187 L + NNL ++ +E ++ S +L+ + SL+A +KY+I+ VG+ F L G +L++ Sbjct: 123 LTFSLNNLFWLYITLELGSILSVYLIVFNLNKESLKAGFKYLILINVGILFSLLGIILLF 182 Query: 188 ANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHS 247 A + + + EV+K SL +L AF+F+ IGF TK GL P H WLPD+++ Sbjct: 183 YMAGNPVMITNIG----EVIK--SLPRNIALLSAFLFI-IGFFTKVGLIPFHLWLPDSYA 235 Query: 248 EAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQ 307 E+PS V+ L+ + L+R I + + L++ LS+ A Q Sbjct: 236 ESPSAVTVFLTGAVTKLGFYGLVRTVTIF--SFNYEEIKILVITLSSLSMLFGAILAFNQ 293 Query: 308 RDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGT 367 +DIK+L+AY S+ MG +A L + GIF + H++NH+L K LF +G ++ G+ Sbjct: 294 KDIKKLIAYVSISEMGFIASALVLKTYEGIFGGVFHLINHTLMKGALFFATGAIIYTCGS 353 Query: 368 RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLL 427 R + + ++ MP + F G LA+ GMP F FLS A LL+ +LL++ Sbjct: 354 RKIEEIKTLIIKMPAITISFFIGTLAVGGMPLFASFLSSITIFLALTNEGFLLVSILLIV 413 Query: 428 LLTLVLAGLVRMAARVLMAKPPQA 451 L + L++ A + K ++ Sbjct: 414 SEFLSVVILLKTAISIFWQKNDKS 437 >UniRef50_C5EMF1 NADH dehydrogenase n=2 Tax=Clostridiales RepID=C5EMF1_9FIRM Length = 497 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 131/442 (29%), Positives = 206/442 (46%), Gaps = 32/442 (7%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L +DG+G LF A+ I L GIYS YM HE ++GF+ + L ++ + Sbjct: 72 LAVDGVGRLFAALTSGIWLLVGIYSFSYMTHEKDE--------FRFFGFYLIVLGVLIAL 123 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 S NL+ + E TL+S LV + ++ A KY+ G LFG +Y+ Sbjct: 124 DFSANLVTFYVCYEMMTLTSLPLVLHEMTKEAVMAGLKYLFYSVAGAFLALFGIFYLYSV 183 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 A S+ + + L L A +L+GFGTK G+FP+H WLP AH A Sbjct: 184 AESLTFTPG-----GVAMGLPANGHDGLFLGAVCCMLVGFGTKAGMFPLHGWLPTAHPVA 238 Query: 250 PSPVSALLSAVLLNCALLVLIR--YYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQ 307 P+P SA+LS ++ +L LIR YYI+ + + + + +L+V + + + Sbjct: 239 PAPASAVLSGLITKSGVLALIRVAYYIVGPDRLRGTWVQDVWMFLALLTVFMGSMLAYKE 298 Query: 308 RDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGT 367 +K+ LAYS+V + + LG+ G AL H++ HSL K LF +G V+ K G Sbjct: 299 PVLKKRLAYSTVSQVSYIIFGLGLFNGTGFVGALSHVVFHSLVKNGLFLAAGAVIFKTGW 358 Query: 368 RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN----HLLIIV 423 + + G+ ++MP + +LAL G+PP + F+S++ T LA L V Sbjct: 359 TRTSEMDGLGRVMPVMLGCYTLVSLALIGIPPASGFVSKWYLATGALASGTGVWSWLGPV 418 Query: 424 LLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDL----------GWLTTSPMVILLVMML 473 +LL+ L L+ +A R P + G++ WL PM+ L + Sbjct: 419 ILLISALLTAGYLLPLAIRGFF--PGADFDEGEIRARGLAGQEPSWLMMVPMLALTAGAI 476 Query: 474 AMGTHIPQPVIRILAGASTIVL 495 G P P+I +L + VL Sbjct: 477 LFGC-FPGPLISMLKSIAATVL 497 >UniRef50_A1AUV4 NADH dehydrogenase (Quinone) n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUV4_PELPD Length = 480 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 117/375 (31%), Positives = 199/375 (53%), Gaps = 27/375 (7%) Query: 78 LFLAILGV-IGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLI 136 +F+AI+ + +G + +YS+GY+ H E YY LFL +M+ +V S NLI Sbjct: 80 VFMAIVSMLVGAVIVLYSMGYISHYDNQNE--------YYFMVVLFLGSMMGIVYSANLI 131 Query: 137 VMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQ 196 +++ E T ++ L+G + + + A K ++ G L G ++++ S Sbjct: 132 LIYLFWEITAIACWRLIGFFREPLCVVRADKAFLMTGFGAFVMLIGFIMIHGQYGS---- 187 Query: 197 AEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSAL 256 F +V+K +S +P L A + +L G +K+ FP+H WLPDA AP+PV+AL Sbjct: 188 -----FDLQVIKSASAANPVANL-AVLLILFGILSKSATFPLHTWLPDA-GVAPTPVTAL 240 Query: 257 L-SAVLLNCALLVLIRYYIIICQAIGSDFP--NRLLLIFGMLSVAVAAFFILVQRDIKRL 313 L +AVL+ + V R ++ + D P N ++ + +S V+ L++ D+KR+ Sbjct: 241 LHAAVLVKIGVYVYARLFV---ASFTVD-PAWNSVVPMIAGISALVSGGAALIETDMKRI 296 Query: 314 LAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVV 373 +AYS+V +G + + L IG PLG LL+IL HS+AK +F +G V K +D+ + Sbjct: 297 IAYSTVSQLGFILLGLSIGNPLGFAGGLLYILMHSIAKGGIFLCAGVVEQKLHVKDITKL 356 Query: 374 CGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVL 433 G++K MP TAV F + ++ G+PPF F S++M I + L+ + +L L + Sbjct: 357 GGLIKTMPVTAVSFLLCSFSVMGIPPFGGFFSKYMVIAGAIRSGDYLLTTIFILGAFLTV 416 Query: 434 AGLVRMAARVLMAKP 448 L R+ A + + +P Sbjct: 417 IYLFRIFAMIFLGEP 431 >UniRef50_Q11VC3 NADH dehydrogenase I chain L n=5 Tax=Bacteroidetes RepID=Q11VC3_CYTH3 Length = 636 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 109/343 (31%), Positives = 186/343 (54%), Gaps = 27/343 (7%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 ID L F++I+ +GFL +YSI YM + + Y+ + +LF+F+MLL+ Sbjct: 80 FQIDNLSVWFMSIITGVGFLIHVYSISYMHDDEG--------VTRYFSYLNLFVFSMLLL 131 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVGVAFGLFGTVLVYA 188 V +N +VM+ E L S L+G + + + +AA K I+ +G L G +L+Y Sbjct: 132 VMGSNYVVMFTGWEGVGLCSYLLIGFWFKNQAYNDAAKKAFIMNRIGDLGFLLGMLLIYN 191 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLL-IGFGTKTGLFPMHAWLPDAHS 247 S+ E ++ + + LK + +P+ ++ A LL +G K+ P++ WLPDA + Sbjct: 192 QFKSL----EYSVVFDQALKIINPNEPSGIIFAITMLLFVGAMGKSAQIPLYTWLPDAMA 247 Query: 248 EAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF--GMLSVAVAAFFI 304 P+PVSAL+ +A ++ + ++ R I+ A P L +I+ G + +AA Sbjct: 248 -GPTPVSALIHAATMVTAGIYMIARSNILYSMA-----PCTLDIIYVVGTGTAILAALIG 301 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK 364 L Q DIK++LAYS+V +G + + +G+G G A + H+ H+ K LLF G+G+V+ Sbjct: 302 LTQTDIKKVLAYSTVSQLGFMFMAIGLG---GYSAGVFHVTTHAFFKALLFLGAGSVIHA 358 Query: 365 Y-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 G +D+ + G++K +P T + F LA+AG+PP F S+ Sbjct: 359 MGGEQDIRKMGGLMKKLPITFITFIIATLAIAGIPPLAGFFSK 401 >UniRef50_A1ALK0 NADH dehydrogenase (Quinone) n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALK0_PELPD Length = 473 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 116/415 (27%), Positives = 201/415 (48%), Gaps = 21/415 (5%) Query: 69 WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLL 128 +L +DG+ L L +G++ + SI +R + + L G + + T Sbjct: 63 FLRVDGISMLMLLAIGLVVAASSAISIPMIRDDTQRHNFVNLVLLSLLGMNGMVMVT--- 119 Query: 129 VVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 +L ++ +E ++ S L+ + G+R + A+ YII+ V T+L+ Sbjct: 120 -----DLFSLYVFLEIVSVCSFILIALCGEREMFQGAFTYIILSAVA-------TMLMLT 167 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 + A + A F + ++ ++L V LIG K G+ P H WLPDA+S Sbjct: 168 SIAILFLYAGNTSFTTLAAAIAAQQGNAMVLFGVVLFLIGLFIKGGIVPFHGWLPDAYSS 227 Query: 249 APSPVSALLSAVLLNCA-LLVLIRYYIIICQAIG-SDFPNRLLLIFGMLSVAVAAFFILV 306 + +PVS LL+ ++ + + LIR ++ + G + N +LL G LS+ A L Sbjct: 228 SVAPVSILLAGIVTKVSGVYTLIR---LVTEVFGPTPRTNEVLLFVGTLSIVAGALGALG 284 Query: 307 QRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG 366 QRD KR+LAYSS+ +G + + LG G LGI A+ H+ NH++ KT LF + V + G Sbjct: 285 QRDFKRMLAYSSISQVGYIVLSLGAGNALGIAGAIFHLFNHTVFKTQLFMNATAVEEQTG 344 Query: 367 TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLL 426 +RDL + G+ MP T L+ AG+PP F S+ + + A + H + +++ + Sbjct: 345 SRDLERMGGLASRMPVTGWTSIIAFLSAAGIPPLAGFWSKLVIVMALVRSGHEIYMMIAI 404 Query: 427 LLLTLVLAGLVRMAARVLMAKPPQAVNR-GDLGWLTTSPMVILLVMMLAMGTHIP 480 L L LA + + +V + + + GWL T+P ++ +++ G IP Sbjct: 405 LASLLTLAYFLTLQRKVFFGEIVEEFKDVREAGWLVTAPALVFAAIIVITGLAIP 459 >UniRef50_C5A689 Membrane bound complex 2, subunit A (Mbc2A) n=2 Tax=Thermococcus gammatolerans EJ3 RepID=C5A689_THEGJ Length = 526 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 128/400 (32%), Positives = 202/400 (50%), Gaps = 33/400 (8%) Query: 33 RTVTVLHSL-GITLLLILALWVVQTAADAGE--IFAAGLW-------LHIDGLGGLFLAI 82 R V + +SL G+ I LW+ + E ++A G W L +D +G + + + Sbjct: 28 RGVVIAYSLVGLLATFISTLWLFNEVYSSNEPLVYALGNWIAPIGIVLEVDLMGAILVLL 87 Query: 83 LGVIGFLTGIYSIGYMRHEVAHG-ELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAA 141 + L GIY++ Y+ H+ HG E +L L + + + N VM Sbjct: 88 TAFLFLLAGIYAVEYLSHD--HGIEFFYTSLLG----LEAGLIGLFMTGDAFNTFVM--- 138 Query: 142 IEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMA 200 +E T S+ LVG Y RS ++E A+KY I +YA+ ++ A Sbjct: 139 LEVTGASAYALVGFYRSRSEAVEGAFKYGISGATATTLYFLALGFIYASFGTLNMADLSA 198 Query: 201 IFWSEVLKQSSLL--DPTLMLLAFVFLLIGFG-TKTGLFPMHAWLPDAHSEAPSPVSALL 257 F ++ L +PTL L F L + K+ +FP H WLP AHS APSPVSALL Sbjct: 199 KFHGISFPVTTKLFGEPTLALAIFFALTLSMVIVKSAIFPGHYWLPYAHSAAPSPVSALL 258 Query: 258 SAVLLNCALLVLIRYYIIICQAIGSDFP-----NRLLLIFGMLSVAVAAFFILVQRDIKR 312 S ++++ + +L RY + D P + +LL G S +++ ++VQ+D+KR Sbjct: 259 SGLVVSGGVYLLARYLYTVFY----DLPFWKTLSVVLLALGAASALLSSIMMVVQKDVKR 314 Query: 313 LLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNV 372 L+AYS++ +MG + + LG+G L + A L H +NH++AK +LF G + GTR ++ Sbjct: 315 LVAYSTILHMGYLVMALGVGTQLALTAFLYHTVNHAIAKGMLFLTVGAFIHHAGTRKIDE 374 Query: 373 VCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 + G+ K MP T LFG L+L G+PP N+F S+ + A Sbjct: 375 LAGIGKKMPLTTALFGLATLSLVGVPPLNVFFSKMLIFNA 414 >UniRef50_B6YWQ6 Hydrogenase 4, subunit 3 n=2 Tax=Thermococcus RepID=B6YWQ6_THEON Length = 520 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 137/473 (28%), Positives = 224/473 (47%), Gaps = 66/473 (13%) Query: 16 LFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLW------ 69 LFS++ RK VL G+ L+ L+ A+D ++ G W Sbjct: 20 LFSIIIKGNRK-----IIQAYVLIGTGLALVSTFKLFQKTYASDRPLVYTFGGWSAPVGV 74 Query: 70 -LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF---HLFLFT 125 +D L L + + FL IYS Y+ HE L YY + L Sbjct: 75 IYEVDKLSALIALVTAGLMFLISIYSYRYLEHENG--------LEWYYTLYLGLEAGLLG 126 Query: 126 MLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVG--------- 175 +LL + NL VM IE T++++ LV Y R S+ A KY +I VG Sbjct: 127 VLLTGDAFNLFVM---IEVTSIAAYALVMFYRDRGDSVYAGLKYALIGAVGTTMYFLALG 183 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIF------WSEVLKQSSLLDPTLMLLAFVFLLIGF 229 + +G FGTV N A + + F +++ S + L L + FL+ Sbjct: 184 ILYGAFGTV----NLADLTAKVHGMDFPLTGAPVGDIVVASGV---ALALATWAFLI--- 233 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFP---- 285 K + P H WLP+AH APSP+SA+LS +++N + LIR+ + G+ P Sbjct: 234 --KAAIVPNHFWLPEAHPAAPSPISAILSGLVVNVGVYSLIRFLYTVYG--GTLIPELAR 289 Query: 286 -----NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAA 340 + ++++ G +S A + VQ+D+KRL+AYS++ +MG + + +G+G LG+ AA Sbjct: 290 IVSVLSNIVVVLGAVSSLFGAAMMTVQKDVKRLIAYSTIMHMGYLFMAVGLGTQLGLQAA 349 Query: 341 LLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 L H++NH++AK LLF +G + G+R+++ + G+ K MP L+L G+PP Sbjct: 350 LFHLVNHAIAKALLFLAAGAFIHAIGSRNVDDLAGLGKKMPVATFSLAIATLSLVGVPPL 409 Query: 401 NIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVN 453 N+F S+ + A L L ++L++ + L VR+ + + KP + + Sbjct: 410 NVFFSKLLLFNA-LMEKGLGPALILVISSVIALVAYVRVFHIIWLGKPRKDIK 461 >UniRef50_C0Z765 NADH-quinone oxidoreductase chain L n=2 Tax=Bacillales RepID=C0Z765_BREBN Length = 637 Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 136/378 (35%), Positives = 192/378 (50%), Gaps = 35/378 (9%) Query: 69 WLHI-----------DGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 WLHI + L + L I+ ++ L IYS GYM + E PV +Y Sbjct: 69 WLHIGDIVINMGFEVNPLNAMMLVIVTLVSLLVQIYSKGYMHGD----ERFPV----FYQ 120 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVA 177 + LF F+ML +V S NL+ ++ E + S LVG Y ++ +AA K I T Sbjct: 121 YLALFTFSMLGLVISPNLLQVYIFWELVGVCSFLLVGYYYFKNEAKAAAKKAFIVTRIGD 180 Query: 178 FGLF-GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLF 236 GLF G L++ S AIF S L + L+P ++ LA + + IG K+G F Sbjct: 181 LGLFIGICLLFWWTGSF---EYGAIFESIALGR---LEPWMITLAAILIFIGAMGKSGQF 234 Query: 237 PMHAWLPDAHSEAPSPVSALLSAVLLNCA--LLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 P+H WLPDA E P+PVSAL+ A + A LV Y + I SD ++ G Sbjct: 235 PLHTWLPDA-MEGPTPVSALIHAATMVAAGVYLVAATYPLFIA----SDTALTVVAYVGG 289 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLL 354 + AA L QRDIKR+LAYS+V +G + + LG+ G G A H++ H+ K LL Sbjct: 290 FTAIFAASIGLTQRDIKRVLAYSTVSQLGYMMMALGVAGAAGYVAGSFHLMTHAFFKALL 349 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA-- 412 F G+G+V+ T+++ + G+ K MP TA+ F G LA+AG+ PF F S+ + A Sbjct: 350 FLGAGSVIHAVHTQNVFEMGGLWKKMPITALTFLIGCLAIAGIFPFAGFWSKEAILGAVY 409 Query: 413 GLARNHLLIIVLLLLLLT 430 G R LL I LL T Sbjct: 410 GAHRYDLLFIALLAAFFT 427 >UniRef50_Q0W6M6 Predicted oxidoreductase integral membrane component (CooM/NuoL-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W6M6_UNCMA Length = 481 Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 120/354 (33%), Positives = 182/354 (51%), Gaps = 26/354 (7%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L +D G L ++ +G L YS Y R P Y+ + + + M + Sbjct: 65 LTLDASGMLISTVVCFLGTLVMFYSFAYKRR--------PQYDSTYFAAYLMMMGFMSGL 116 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 S+N+++M +EA+T+ SA LV + S++AA Y+ I V ++G ++Y + Sbjct: 117 ACSSNVVIMLIFLEASTVISAVLVLFGRTKRSIQAATVYLTISIFEVLLVMYGAFILYNH 176 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH-AWLPDAHSE 248 S +VL SL+ + L + L GFGTK GL P+ WLP AHSE Sbjct: 177 TGSF-----------DVLTSMSLIPDSDKFLLALLFLFGFGTKAGLLPLGLIWLPPAHSE 225 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLI---FGMLSVAVAAFFIL 305 AP P+SA +S +L++ +++ +IR + GS + L+LI FG L++ V L Sbjct: 226 APPPISATMSGILISASVIAMIR---AVYPFYGSSGFDTLMLIVVGFGALNLIVGMIMAL 282 Query: 306 VQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY 365 Q D+KR+LAYSS+ MG + + LG+ LG + AL HI NH L K LF SG ++L Sbjct: 283 FQEDLKRVLAYSSISQMGYIIMGLGLATTLGAYGALFHITNHMLFKGALFLISGALILGV 342 Query: 366 GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 TR L+ + G+ K MP TA+ F LA+AG+P N +S+ A + HL Sbjct: 343 NTRQLHKMGGLWKRMPITAICFAIAGLAMAGLPFLNGAVSKGAIEEATMEAAHL 396 >UniRef50_Q21TB5 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21TB5_RHOFD Length = 480 Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 107/366 (29%), Positives = 202/366 (55%), Gaps = 4/366 (1%) Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLF 181 F+ + L V SN+LI+MWA IE +TL +A LV S AW+Y++ + ++ Sbjct: 110 FMLIINLGVMSNHLILMWALIELSTLCAAPLVARGDAASPKGVAWRYMLYSAMTLSITFL 169 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 G + + +A + +++ ++ + + L F+L G G K GL P+++W Sbjct: 170 GFMCLAQSAD--LRGVDISFSVDQLGRALTTNSDGWQRLGLSFMLFGLGGKLGLAPLYSW 227 Query: 242 LPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 +P+ + AP+ SALL+AV N +++ + R + + Q S F ++ LL+ G LS+ VAA Sbjct: 228 MPETYEAAPTSTSALLAAVQFNISVVAVFRI-LQVFQGFESHFVSQELLLMGYLSLVVAA 286 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 ++ R+ KRL+AY+ V + G++A+ L +G + +L+I++++ K+LLF +G + Sbjct: 287 VQVMAVRNYKRLIAYACVSSSGVIALGLSVGKA-AAYGVVLYIVSNAFVKSLLFLTAGRL 345 Query: 362 LLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLI 421 YGT D+ + G++++MPF+ +LF G AL G PPF FL+E M ++ + +L+ Sbjct: 346 RAVYGTNDVAPLSGVIRVMPFSGLLFTVGIFALLGFPPFASFLAEMMILSGIVQAGNLMA 405 Query: 422 IVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQ 481 L+ ++LT++ R +L + W+ P + + +++ +GT+ P+ Sbjct: 406 FTLMCVMLTIIFVATGRTVFPMLWGASKREGPPVHESWIAALPKLGFVFILIMLGTYAPK 465 Query: 482 PVIRIL 487 P+ ++L Sbjct: 466 PITQLL 471 >UniRef50_C7Q1G6 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycetales RepID=C7Q1G6_CATAD Length = 585 Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 114/376 (30%), Positives = 188/376 (50%), Gaps = 16/376 (4%) Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 FA G+ D G F + IG L +Y++ + G L L + L L Sbjct: 76 FALGVAFAADPFGLTFALLSAGIGALLVLYTLSEL------GGLGARELGGFAALVQLLL 129 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFGLFG 182 ++ + + + ++ E L+S L G + +R +LEAA+K +++ T+ F +F Sbjct: 130 AGLIGAALTADTVDLFVWFEVAALASYGLTGFFLERPPALEAAFKILVLTTI-AGFCVFI 188 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 + N + ++A + L+ + LL A + GF TK GL P H WL Sbjct: 189 AAGLLYNTHGALNYGQLATALTGPLQAADLL-------ALGLFIAGFATKAGLVPFHGWL 241 Query: 243 PDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAF 302 DAH+ AP PVSAL S +++N ++ + R + I A + L+ + G+ S V A Sbjct: 242 ADAHTAAPGPVSALFSGLMVNLGIVGITRIALQIYPAAHTPVLGALM-VLGVASALVGAC 300 Query: 303 FILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVL 362 LVQ D+KRLLAY +V +G++ L P G+ + H++NH+L KTLLF +G ++ Sbjct: 301 LALVQDDLKRLLAYDTVSQVGVIVAGLATADPAGVAGGVYHLINHALFKTLLFLCAGAIV 360 Query: 363 LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLII 422 + G +L+ + G+++ P V FG G ++AG+PPFN ++S + T + L Sbjct: 361 HRTGETELSRMGGLMRSWPGLTVAFGIGVASIAGVPPFNGYVSVGLIHTGLRDSDQYLPY 420 Query: 423 VLLLLLLTLVLAGLVR 438 VLLL+ + +A L R Sbjct: 421 VLLLVAQLITIAALAR 436 >UniRef50_A1RWL4 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL4_THEPD Length = 487 Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 128/398 (32%), Positives = 196/398 (49%), Gaps = 28/398 (7%) Query: 66 AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG-FFHLFLF 124 A L ++ID L F+ + + F I+S+GY++ + +GE S Y+G F++ F+F Sbjct: 73 APLTVYIDSLSASFVFAVATLTFAISIFSVGYLK--MFYGERS----IGYFGTFYNAFIF 126 Query: 125 TMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEA-AWKYIIICTVGVAFGLFGT 183 +M++ ++N++ E T SS FLV IY + + Y I+ VG A Sbjct: 127 SMIMTCCTDNVLWFLFFWELMTASSYFLV-IYEDTPDVRRIGYLYFILMHVGFACIAVSL 185 Query: 184 VLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLP 243 VL + S WS + ++P + LIGFG K GL P+H WLP Sbjct: 186 VLTVLTSGS----------WSLLKVDPHTIEPGVKTAILALALIGFGMKLGLVPLHVWLP 235 Query: 244 DAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFF 303 +AH APS VSALLS V+L+ L L R I + ++ + I +LSVAV Sbjct: 236 EAHPAAPSNVSALLSGVMLSMGLYGLTR--ISLALQANMEWWYSAIAILAVLSVAVGVLC 293 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGI---GGPLGIFAALLHILNHSLAKTLLFCGSGN 360 + Q D KRLLAYSS+ MGL ++ L G LG+ A L+H++N + AK LF SG Sbjct: 294 MPAQMDFKRLLAYSSIVEMGLASLSLSYYLAGSQLGLKAMLMHVVNQAYAKGALFALSGL 353 Query: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG----LAR 416 +L GT+ L+ + G+ P A + AL + G+PPF F S+ + +G L Sbjct: 354 LLYCAGTKRLSDIRGLWDANPLVAAVLLAAALDIMGLPPFGCFFSKAYIVLSGFNPALGL 413 Query: 417 NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR 454 L L + + A +R+ +M +P +A+ + Sbjct: 414 WAPLAASASLAIEVVCFAWFLRVVQHAVMGEPSEAMQK 451 >UniRef50_A0AL63 Complete genome n=20 Tax=Bacillales RepID=A0AL63_LISW6 Length = 802 Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 140/481 (29%), Positives = 232/481 (48%), Gaps = 65/481 (13%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 +DGL LF ++ IG L YSI Y+ + L ++Y F +F+ ML VV Sbjct: 75 VDGLSLLFALLITGIGSLVTFYSIYYLGKKKER-------LSNFYTFLFMFMTAMLGVVL 127 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFGLFGTVLVYANA 190 S+NLIV++ E T++SS L+G + R S A K ++I G L G +L++ + Sbjct: 128 SDNLIVLYLFWELTSISSFLLIGYWYHRERSRYGARKSMMITVFGGLMMLGGFILLHIMS 187 Query: 191 ASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAP 250 S +A + ++++ +SL P ++L+ L+G TK+ P H WLPDA EAP Sbjct: 188 DSFSIRAIIQN--ADIISHNSLFIPAMILV-----LLGAFTKSAQVPFHIWLPDAM-EAP 239 Query: 251 SPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRD 309 +PVSA L SA ++ + ++ R+ + + G F L+ G+ ++ + + D Sbjct: 240 TPVSAYLHSATMVKAGIYIVARFTPLFASS-GVWFWTVSLV--GITTLFWGSLNATKKND 296 Query: 310 IKRLLAYSSVENMGLVAVELGIGGP-------------LGIFAALLHILNHSLAKTLLFC 356 +K +LAYS++ +G++ LG+G + I AA+ H+ NH+ K LF Sbjct: 297 LKAILAYSTISQLGMIMALLGVGAASLHFDTLSDDIYVMAIVAAVFHLFNHATFKGSLFM 356 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 G V + GTRD+ + G+++IMP TA + G A+AG+PPFN FLS+ M + + Sbjct: 357 MVGIVDHETGTRDIRRLGGLMRIMPITATIAFIGTFAMAGIPPFNGFLSKEMFFESMINI 416 Query: 417 NHLL------------IIVLLLLLLTLVLAGLVRMAARVLMAKP---PQAVNRGDLGWLT 461 HL ++ + + T V + ++ KP P+ + G L Sbjct: 417 THLQLFDASTWGILLPVVAWVASVFTFVYSMIIFFKTFTGKVKPFLLPKKPHEAPFGLLL 476 Query: 462 TSPMVILLVMMLAMG-------THIPQPVIR-ILAGASTIVLSGTHDLPAQRSTWHDFLP 513 P +IL + ++ +G I +P +R I+ G +T D S WH F P Sbjct: 477 --PPIILSIFVVLIGLFPNLIAKPILEPAVRAIVPGLAT-------DFSIHISLWHGFTP 527 Query: 514 S 514 + Sbjct: 528 A 528 >UniRef50_A8JYL0 Formate hydrogenlyase subunit D n=1 Tax=Thermococcus litoralis DSM 5473 RepID=A8JYL0_THELI Length = 603 Score = 147 bits (371), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 126/382 (32%), Positives = 191/382 (50%), Gaps = 63/382 (16%) Query: 62 EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 IF D + F ++G+ GF IY+ YM E H L+ + Sbjct: 48 SIFGLEFTFMTDTISRFFCILVGISGFAVSIYTTEYM--EPRHLNLAA---------YPA 96 Query: 122 FLFTMLLVVTSNNL---IVMWAAIEATTLSSAFL-VGIYGQRSSLEAAWKYII------- 170 F+ +M L+V S + I+ W E T++S L V Y + +A Y++ Sbjct: 97 FVLSMALIVISRDFLGFIIFW---ELMTIASYILIVTYYDSPETKKAGLIYLVAMHAFNT 153 Query: 171 ---ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLI 227 + +G + FGT+ + S + A + PT ++ AF LI Sbjct: 154 APLLLAIGAIYSNFGTL-----SFSTLQGAYV---------------PTWVIWAF---LI 190 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNR 287 GF +K G+FP+H WLP+AH APS VSALLS +L A+ +IR II GS R Sbjct: 191 GFMSKAGIFPIHFWLPEAHPVAPSNVSALLSGTMLKMAIYGMIR---IIELFPGSVVIAR 247 Query: 288 LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG-------GPLGIFAA 340 +++ +L++ + A LVQ+DIKR++AYSSV+NMG + + LG + A Sbjct: 248 AMVVLAVLTIVIGAIMALVQKDIKRIMAYSSVDNMGYLFLALGAYIMLDETLKKIAFLAV 307 Query: 341 LLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 LLH NH + K LLF SGNVL G +DL + G+ K MPFTA + G L+++ +PP Sbjct: 308 LLHTFNHLVFKNLLFMLSGNVLHATGRKDLG-LRGLGKKMPFTAAMMIVGILSVSAVPPL 366 Query: 401 NIFLSEFMTITAG-LARNHLLI 421 N F+S+++ A L+++ LL+ Sbjct: 367 NGFISKWLIYQATFLSKDPLLV 388 >UniRef50_P23482 Hydrogenase-4 component B n=69 Tax=Bacteria RepID=HYFB_ECOLI Length = 672 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 108/357 (30%), Positives = 183/357 (51%), Gaps = 30/357 (8%) Query: 66 AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF-HLFLF 124 A L L +D L + ++ ++ + +YS+ YMR G + GFF ++F+ Sbjct: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA-------MGFFMNIFIA 123 Query: 125 TMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTV 184 +M+ ++ +N E +LSS FLV ++S+ A Y I G + + Sbjct: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFL 183 Query: 185 LVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 L+ + S+ + A F ++ L P L F+ GFG K G+ P+H+WLP Sbjct: 184 LMGRESGSL----DFASF------RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPR 233 Query: 245 AHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD-FPNRLLLIFGMLSVAVAAFF 303 AH APS SAL+S V++ + +++ + + G + L++ G +S + + Sbjct: 234 AHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLY 293 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIG-------GPL----GIFAALLHILNHSLAKT 352 L ++DIKRLLA+S+VEN+G++ + +G+ PL G+ AL H+LNH+L K Sbjct: 294 ALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 Query: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 LLF G+G ++ + T D+ + + K MP+TA G LA++ +PP N F+SE+ T Sbjct: 354 LLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYT 410 >UniRef50_Q2RXM6 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM6_RHORT Length = 505 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 127/412 (30%), Positives = 203/412 (49%), Gaps = 32/412 (7%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMR-HEVAHGELSPVTLCDYYGFFHLFLFTMLL 128 L +D L L L ++ + GFL +YS GYM V H S L YY F LF+ M+ Sbjct: 94 LALDPLSCLMLVVITLCGFLVVLYSGGYMSLGNVEHP--SDANLARYYFFVCLFITAMVG 151 Query: 129 VVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 +V+S N ++ E TTL S L+ YG +L++A+K ++I F VL+Y Sbjct: 152 LVSSPNYFQLFLFWELTTLCSWGLISFYGDAEALKSAYKALLITHGAGLFLAAAVVLIYV 211 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 S +LL P L L F+ I K FP WLP A + Sbjct: 212 ETGSF------------AFDAINLLTPGLKSLVIAFMGIAALAKAAQFPFFTWLPTAMA- 258 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD-FPNRL---LLIFGMLSVAVAAFFI 304 AP+P S+ L A A +V Y++ A+ D FP L L + ++++ +A Sbjct: 259 APTPASSYLHA-----AAMVKAGIYLLARLALSVDAFPPELGLALSVIAIVTMCLAVVLY 313 Query: 305 LVQRDIKRLLAYSSVENMG--LVAVELG-IGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 Q D+KRLLA+S++ N+G ++ + +G +G + +LH++ HS K+LLF G + Sbjct: 314 FPQDDLKRLLAFSTIANLGYMVLGIAMGAMGSRTALEGGMLHLVGHSFTKSLLFLAVGAI 373 Query: 362 LLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLI 421 GTR + ++ G+ + MP TA+ F GA+A++GMPPFN+F S+++ ++ + + Sbjct: 374 SYATGTRKIGLLSGLGRKMPVTALAFVLGAMAISGMPPFNMFWSKYLIVSGAIELSSTWG 433 Query: 422 IVLLLLLLTLVLAG---LVRMAARVLMAK-PPQAVNRGDLGWLTTSPMVILL 469 L +L L +AG + + +V P A N D G P+++L+ Sbjct: 434 WTLAVLTLAESVAGFAWFLHIVHKVFFGPVSPTAENARDPGAAMLIPLIVLM 485 >UniRef50_A6UVK0 NADH dehydrogenase (Quinone) n=2 Tax=cellular organisms RepID=A6UVK0_META3 Length = 723 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 121/357 (33%), Positives = 187/357 (52%), Gaps = 31/357 (8%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 ID + F A++ ++ + IYS GYM + + T Y F + + +M+ V Sbjct: 139 FKIDPISMFFSAVVLLVSIMAAIYSYGYMDDK----KRKLATGFQYLNF-AVLVASMVGV 193 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVGVAFGLFGTVLVYA 188 SNN I+ E ++SS LV G + + ++ + Y+I G F L Y Sbjct: 194 TISNNSIIFLLFWELMSISSFLLVMFDGFKEEVRKSGYIYLIYTHAGGMFIFASFALAYV 253 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 S+ Q S + L + F+ +GF +K G+FP H+WLP AH Sbjct: 254 ATGSIS------------FDQFSNMPDYLKIAVFLLGFVGFASKAGVFPFHSWLPYAHPV 301 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQR 308 APS VSA++S V++ + +I +I+ I + + ++LI G+LS + + L Q Sbjct: 302 APSHVSAVMSGVMIKMGIYGIIM--LILLLGINNIYIGYMVLILGILSGILGVAYALAQH 359 Query: 309 DIKRLLAYSSVENMGLVAVELGIGGP-----------LGIFAALLHILNHSLAKTLLFCG 357 DIKRLLAYSS+EN+G++ + LGIG LG ALLHILNH+L K+LLF G Sbjct: 360 DIKRLLAYSSIENIGIILIGLGIGLIGKYYHNETIALLGFAGALLHILNHALFKSLLFMG 419 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 +G ++ GT L + G++K MP T+++F G+LA++G+PPFN F+SE + G Sbjct: 420 AGAMIKSTGTHSLEGMGGLMKRMPTTSLVFLIGSLAISGIPPFNGFVSELLIYMGGF 476 >UniRef50_B0K5U2 NADH dehydrogenase (Quinone) n=6 Tax=Thermoanaerobacter RepID=B0K5U2_THEPX Length = 486 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 120/385 (31%), Positives = 195/385 (50%), Gaps = 35/385 (9%) Query: 54 VQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 ++ AD +F A L+L A+L ++ F + Y IG + A+ Sbjct: 70 IELYADKLSVFMATLFLSC--------ALLILVSFESFKYEIG--EEKAAY--------- 110 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICT 173 Y+ + + ML ++ + +L ++ +E TT+++ ++ I ++ ++EAA KY I+ + Sbjct: 111 -YFMLVSILIGAMLGIIFTRDLFNLYVFVEITTIAACGIISIKNEKKAVEAALKYFILSS 169 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 + L G +L+Y N + + VL +S + P ++ + V ++ GF K+ Sbjct: 170 IASTSILLGLILIY-NIGGYLHYDTL----KSVLLESKDVFPKIISGSLVLIISGFSLKS 224 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPN-----RL 288 LFP+H WLPDAHS AP+ SALLS +++ + +IR ++ G + + Sbjct: 225 ALFPLHIWLPDAHSAAPTTSSALLSGLVIKVYVFAIIR---LLNDVFGLMYTYTSILLEV 281 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 LL G + V A Q DIKR LAYSSV MG V + LG G ALL +LNH+ Sbjct: 282 LLALGNVGVFSGAVLAGFQNDIKRRLAYSSVSQMGYVFLGLGFNNQYGFEGALLQVLNHA 341 Query: 349 LAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 LAK+ LF +G ++ GTRD+ + + +P TA+ F A++L GMP FLS++ Sbjct: 342 LAKSGLFLAAGWMVKFTGTRDIKGLEKISDKLPLTALCFSVCAMSLVGMPFTLGFLSKWH 401 Query: 409 TITAGL--ARNHLLIIVLLLLLLTL 431 A + R LI ++L LLTL Sbjct: 402 LAMAAIESGRPLQLIFIILSALLTL 426 >UniRef50_Q1PZK0 Similar to membrane-bound [NiFe]-hydrogenase-3, subunit C n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZK0_9BACT Length = 678 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 117/379 (30%), Positives = 196/379 (51%), Gaps = 27/379 (7%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF-FHLFLFTMLLVV 130 +D L F+ ++ VIGF+ IYS+GY + V + + GF ++L L +MLLVV Sbjct: 76 LDPLSSFFMLVISVIGFVASIYSMGYTKLYVNKRD------TRFLGFAYNLLLVSMLLVV 129 Query: 131 TSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 T+NN +V E TL S FLV + ++ +A + Y+++ +G +++A Sbjct: 130 TANNALVFMIVWELMTLVSFFLVIFEHENPTNRKAGYVYLVMSHIGAGLIAVAFFIMFAY 189 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 A + + + + + P + F ++IGFG K G+FP+H WLP AH A Sbjct: 190 AGEAFTFS-----FDDFRHIGAHMPPIYKNIVFFLIIIGFGIKAGIFPLHLWLPMAHPAA 244 Query: 250 PSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRD 309 PS VS ++S V++ A+ IR+Y + ++L+ G S + + L++RD Sbjct: 245 PSNVSMVMSGVMIKTAIYGFIRFYFEFLTPC-PPWWGFIVLVAGASSAILGILYALMERD 303 Query: 310 IKRLLAYSSVEN-----------MGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 IK LLAYSSVEN M + L L + A L H++NH++ K LLF + Sbjct: 304 IKTLLAYSSVENIGIILIGIGLSMIFKSYNLMTLSSLAMMAGLYHLINHAVFKCLLFGCA 363 Query: 359 GNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH 418 GN+ T+++ + G++K + TA LF GAL+++ +PP N F+SE++ + L N Sbjct: 364 GNIYYSTHTKNIEELGGLIKRLRVTAPLFLVGALSISAIPPLNGFMSEWLIFQSLL--NG 421 Query: 419 LLIIVLLLLLLTLVLAGLV 437 I + ++T++ +V Sbjct: 422 FYIPSVFFKVMTVICGAIV 440 >UniRef50_A1ALQ0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALQ0_PELPD Length = 639 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 111/336 (33%), Positives = 181/336 (53%), Gaps = 24/336 (7%) Query: 86 IGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEAT 145 +G L +YS+GYM H+ E P Y+ + +LFLF ML++V N+I+++A E Sbjct: 94 VGTLIHLYSVGYMSHD----EDQP----RYFAYLNLFLFFMLMLVLGKNMIMLFAGWEGV 145 Query: 146 TLSSAFLVGIYGQRSSLEAA-WKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWS 204 L+S L+G + Q AA K I+ VG + +L+++ + ++ Q A F + Sbjct: 146 GLASYLLIGFWYQDDEKSAAGMKAFIVNRVGDTGFVLAALLIFSYSHTLDFQGINAYFGT 205 Query: 205 EVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLN 263 L S+ M L + LLIG K+ P+H WLPDA + P+PVSAL+ +A ++ Sbjct: 206 AGLPVST------MNLIGILLLIGACGKSAQIPLHVWLPDAMA-GPTPVSALIHAATMVT 258 Query: 264 CALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMG 323 + +L R ++ QA G+ ++++ G L+ V A L Q ++K++LAYS++ +G Sbjct: 259 AGVYLLSRMNGVLLQAPGA---MQVVMWGGALTAFVGATMGLTQYNLKKVLAYSTMSQIG 315 Query: 324 LVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPF 382 + + G+G AA+ H+ +H+ K LF G+G VL +G D+ + G+ K MP Sbjct: 316 YMFMACGLG---SFSAAMFHLYSHAFFKACLFLGAGAVLHALHGEEDMRKMGGLAKKMPL 372 Query: 383 TAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH 418 T V F G+LAL G+PPF F S+ + + A H Sbjct: 373 TFVTFLAGSLALCGVPPFAGFFSKDEILWSAFASAH 408 >UniRef50_C6CN10 NADH/Ubiquinone/plastoquinone (Complex I) n=15 Tax=Gammaproteobacteria RepID=C6CN10_DICZE Length = 679 Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 130/428 (30%), Positives = 211/428 (49%), Gaps = 41/428 (9%) Query: 10 LLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA---- 65 L L LFSLLC CR+ L A R + G ++ A V+ IF Sbjct: 20 LYLAGALFSLLC--CRRESL-AIRLSGLCALAGGCAGVLAAAPVLLGGGALTAIFDGPFD 76 Query: 66 --AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF-HLF 122 A L L D L ++ ++ ++ +YS+ Y+ G + GFF +LF Sbjct: 77 AFAHLTLRFDTLAAFMTLVISLLVTVSALYSLAYLEEYRGRGAWA-------MGFFMNLF 129 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFG 182 + +M+ +V +N E +LSS FLV ++ A Y +I G + Sbjct: 130 VASMVALVVVDNAFYFIVLFEVMSLSSYFLVIADQDDEAVSAGLLYFLIAHAGSVLIMAA 189 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 L+Y ++AS+ + A F + +SL P ++ F+ GFG K G+ P+H WL Sbjct: 190 FFLLYRHSASL----DFADF-----RHASLSAPQASVV-FLLAFFGFGAKAGMLPLHGWL 239 Query: 243 PDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAF 302 P AH APS SAL+S V++ + +I+ I + A + ++L FG +S + Sbjct: 240 PRAHPAAPSHASALMSGVMVKIGVFGIIKVGIDLLGAT-ETWWGVVVLAFGAVSSVLGVL 298 Query: 303 FILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGI------------FAALLHILNHSLA 350 + L + DIKRLLAY +VEN+G++ + +G+G +GI L H+LNH++ Sbjct: 299 YALAEHDIKRLLAYHTVENIGIILMGVGVG-MIGIATHHPLLALLGLLGGLYHLLNHAVF 357 Query: 351 KTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 K LLF G+G V+ + T+D+ + G+ ++MP TA+ F G +A++ +PP N F+SE+ T Sbjct: 358 KGLLFLGAGAVIYRVHTKDMEKMGGLARLMPRTALAFLVGCMAISALPPLNGFVSEWFTY 417 Query: 411 TAGLARNH 418 + +H Sbjct: 418 QSLFTLSH 425 >UniRef50_B9ZEN4 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZEN4_NATMA Length = 678 Score = 145 bits (365), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 141/460 (30%), Positives = 220/460 (47%), Gaps = 45/460 (9%) Query: 52 WVVQTAADAGEIFAAGLWLH----IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGEL 107 W + AA EI A G+ ID L L L I+ +I FL I+S+GYM E G Sbjct: 68 WAIGDAAS--EIGADGIEFTFGILIDPLAALMLVIVSLIAFLVHIFSLGYMNAEGETG-- 123 Query: 108 SPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAW 166 L YY LF F+ML V ++NL++ + E L S L+G + + RS+ AA Sbjct: 124 ----LPRYYASLGLFTFSMLAFVYADNLLMAFMFFELVGLCSYLLIGFWFRTRSAPSAAK 179 Query: 167 KYIIICTVGVAFGLFGTVLV--------YANAASVMPQAEMAIFWSEVLKQSSLLDPTLM 218 K ++ G F L G V + +A S + AE AI + L T + Sbjct: 180 KAFLVTRFGDYFFLLGVVAIAATFGTVAFAGDNSFVTAAETAIDNGDTL--FGFGAETWV 237 Query: 219 LLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIR----YYI 274 + + +L G K+ FP+H WLPDA E P+ VSAL+ A + A + L+ YY Sbjct: 238 TITALLVLGGVIGKSAQFPLHTWLPDAM-EGPTTVSALIHAATMVAAGVYLVARMFGYYA 296 Query: 275 IICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGP 334 + A+ ++ G + AA +V+ DIK++LAYS++ G + + LG+GG Sbjct: 297 LSPTALA------IIAFVGGFTALFAATMGVVKDDIKQVLAYSTISQYGYMMLGLGVGGY 350 Query: 335 LGIFAALLHILNHSLAKTLLFCGSGNVL-LKYGTRDLNVVCGMLKIMPFTAVLFGGGALA 393 + A + H++NH+ K LLF G+G V+ L + +D+ + G+ P T F GALA Sbjct: 351 V---AGVFHLMNHAFFKALLFLGAGAVIVLMHHEQDMWKMGGLKDKAPITYYTFLAGALA 407 Query: 394 LAGMPPFNIFLSEFMTITAGL---ARNHLLIIVLLLLLLTLVLAGLV--RMAARVLMAKP 448 LAG+ PF+ F S+ + L +++ + L+ + G RM +P Sbjct: 408 LAGIIPFSGFWSKDEILYDALIIGIEEPIILAAYAMALVAVFFTGFYTFRMVFLTFHGEP 467 Query: 449 --PQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRI 486 A + D+GW +P+++L V+ L G PV ++ Sbjct: 468 RSEAAEDPHDIGWSMKAPLIVLGVLALVAGIANLAPVAKL 507 >UniRef50_B5Y906 Membrane bound hydrogenase, MbxH subunit n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y906_COPPD Length = 1024 Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 150/288 (52%), Gaps = 11/288 (3%) Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAA 191 +N+L M+ +E ++S+ LV Y + EA+ KY+I+ +V +F LF +L+Y Sbjct: 133 TNDLFNMYVFLEIASISAYALVNAYRTAETAEASMKYLILGSVATSFVLFALILIYQGTR 192 Query: 192 SVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPS 251 S+ W K S+ TL L A L +GFG + ++P+++WLPDAH AP+ Sbjct: 193 SLN-------MWDISFKIGSMPTGTLWL-AIASLFVGFGVEGAIWPLNSWLPDAHPAAPA 244 Query: 252 PVSALLSAVLLNCALLVLIRY-YIIICQAIGSDFP-NRLLLIFGMLSVAVAAFFILVQRD 309 +SALLS ++ +L ++R+ YI+ AI + + L++ L+V V F Q D Sbjct: 245 SISALLSGAVIKIGILAMVRFMYIVFTGAIATTKQFSVFLMVIAALTVLVGEFSAYRQHD 304 Query: 310 IKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRD 369 +KRLLA+SS +G + + + G P+G +LH+ H L+K L F SG + K RD Sbjct: 305 VKRLLAFSSTAQVGYMVLGIFSGSPIGFVGGILHVFGHGLSKALAFLLSGEITDKVPDRD 364 Query: 370 LNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 LN G L + TA L L+ MPPF F S+ I + R Sbjct: 365 LNKAGGSLSGIS-TAYSNLVAVLGLSSMPPFLTFFSKLFIIIGLVQRQ 411 >UniRef50_Q67NV3 Na+/H+ antiporter subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67NV3_SYMTH Length = 754 Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 151/475 (31%), Positives = 233/475 (49%), Gaps = 48/475 (10%) Query: 52 WVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYM--RHEVAHGELSP 109 WV Q D L +H+DG G LF ++ IG L +YSI Y+ R + Sbjct: 40 WVPQLGID--------LSIHVDGWGRLFALLIAGIGTLVVLYSIPYLGARED-------- 83 Query: 110 VTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKY 168 L +Y + LF+ ML VV + NL++M+ E T++SS L+G + R + A K Sbjct: 84 --LGKFYAYLLLFMGAMLGVVYAGNLMLMYVFWELTSISSFLLIGFWNTRDDAQYGALKA 141 Query: 169 IIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVL-KQSSLLDPTLMLLAFVFLLI 227 I+I FG L +++ S +L KQ+ LL L+ +A V LLI Sbjct: 142 ILIT--------FGGGLCMLGGLAILGTVGGTFELSALLAKQAELLGHPLVTVALVLLLI 193 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPN 286 G TK+ FP H WLPDA + AP+PVSA L SA ++ L ++ R + I Sbjct: 194 GAFTKSAQFPFHIWLPDAMA-APTPVSAYLHSATMVKAGLYLIGRLWPIFHT---HPLWV 249 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 ++ GM+++ V +F + + D+K +LA S++ +GL+ G+G P AA H+LN Sbjct: 250 PVVAAVGMVTMVVGSFLAVQKTDLKAVLALSTISQLGLIMWLFGLGTPEATQAAAFHLLN 309 Query: 347 HSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 HS K LLF G + + GTR++ ++ G+ + MP +A L GA ++AG+P N FLS+ Sbjct: 310 HSTFKALLFMVVGIIDHQTGTREIPLLSGLRRAMPVSAGLAMVGAASMAGVPLLNGFLSK 369 Query: 407 FMTITA----GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP---PQAVNRGDLGW 459 M +TA + L+ LL TL + + ++ +P P G Sbjct: 370 EMFLTAVHGSSMGAAGALVATGASLLTTLY---CLILGHKIWFGEPHETPDVPEEGSPSI 426 Query: 460 LTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPS 514 L P ++L V+++A+G + I+ A VL G DLP + WH F P+ Sbjct: 427 LV--PPLLLAVIIVAVGIYPGLVESAIVTPAVAAVLQGPADLP-HIALWHGFTPA 478 >UniRef50_B2A694 NADH dehydrogenase (Quinone) n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A694_NATTJ Length = 748 Score = 144 bits (363), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 126/424 (29%), Positives = 212/424 (50%), Gaps = 40/424 (9%) Query: 4 SVMFALLLLTPLL--FSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG 61 S++ L++ PLL F ++ + +L TV ++ ++ + LL ++ V Q Sbjct: 13 SILPILIIFVPLLGSFGVILISSVSEKLRDIYTV-IISAVPLVLLAVMYPLVQQGIVQYN 71 Query: 62 -EIF-AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 E F GL +D LG LF A++ +I FL +Y+ Y+ HE H + + FF Sbjct: 72 IEWFLEIGLIFRLDSLGFLFTALISLIWFLATLYATEYISHE--HNR-------NRFYFF 122 Query: 120 HLFLFTMLL-VVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAF 178 LF F L V + +L ++ E +L+S LV + ++ A ++ + G Sbjct: 123 WLFTFGATLGVFVTGDLFGLFVFFEMMSLTSYVLVIHEEDKDAMRAGNLFLFLGIGGGLA 182 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 LFG ++Y N ++ E+A +++ + P L+LL +IGFG K G+ P+ Sbjct: 183 ILFGLFIMYFNLETL----EIAPMLGDMVAAGVNI-PVLLLL----FIIGFGIKAGIVPL 233 Query: 239 HAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD----FPNRL------ 288 H WLP AH AP+P SA+LS +L+ + L R ++++ S + + Sbjct: 234 HIWLPKAHPVAPTPASAILSGLLIKTGVYGLWRVFLMVMGPASSQEVELYQQYITNWGMG 293 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLV------AVELGIGGPLGIFAALL 342 L G++++ + A L+Q K++LAYSSV +G + AV LG GP+G ++ Sbjct: 294 LFWIGIITMVLGALMALLQTSAKKMLAYSSVSQVGFIIMGLGAAVYLGTDGPIGFAGGIM 353 Query: 343 HILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNI 402 H++NH+L K LF G + ++ D++ V GM K MPF + F AL +AG+P FN Sbjct: 354 HVINHALFKACLFLIVGAIFIRTHLLDIDRVRGMFKQMPFMGIAFIIAALGIAGVPLFNG 413 Query: 403 FLSE 406 + S+ Sbjct: 414 YASK 417 >UniRef50_B5YKQ9 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKQ9_THEYD Length = 686 Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 129/494 (26%), Positives = 232/494 (46%), Gaps = 60/494 (12%) Query: 53 VVQTAADAGEIFA------AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGE 106 +++ EIF+ + + ID L LFL I+ ++ F ++S Y+ + Sbjct: 50 IIENKFIEQEIFSLKPLLNSSFTISIDSLSALFLLIISLVSFCVSLFSWKYLD---VYKT 106 Query: 107 LSPVTLCDYYGFFHLFLFTMLLVVTSNNL---IVMWAAIEATTLSSAFLVGIYG--QRSS 161 SP +Y F L + VV+ + IV W E TLSS FLV I+ ++S+ Sbjct: 107 NSP---KRFYPFLILLFIASIGVVSVKDFLFFIVFW---ELMTLSSWFLV-IFEREKKSA 159 Query: 162 LEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLA 221 L+ +Y I V AF + +V++Y+ + E+ +S ++K L ++ Sbjct: 160 LKGGLQYFIATHVTTAFLILASVILYSYSND-FSFKEINKSFSLIIKNQPYLSHFILFCI 218 Query: 222 FVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIG 281 F I F TK G+ P WLP+ + + PS S+ V+ A+ L R++ C I Sbjct: 219 F----IAFVTKAGVLPFGFWLPNTYPQPPSSASSFFGGVMSKLAVYALFRFF---CSVIP 271 Query: 282 SDFPNRL----LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG----- 332 F ++ + FG+ S+ V L Q + KRL+++ ++ +G + + +G+G Sbjct: 272 FSFHTQIWGFIIASFGVFSIFVGTIAALTQDEAKRLMSFHAIGQVGYMFLGIGVGLYFIR 331 Query: 333 -----GPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLF 387 + + L H+ N+S+ K+LLF +G++ K GT DLN V G++K+MP TA+ Sbjct: 332 INPFLASIALVGGLFHVFNNSIYKSLLFLNAGSIFYKTGTTDLNKVSGLMKVMPLTAITA 391 Query: 388 GGGALALAGMPPFNIFLSEFMTITAG-----------LARNHLLIIVLLLLLLTLV-LAG 435 G+L++AG+PPFN F+S+ + + L R ++ ++ + ++ V LA Sbjct: 392 LIGSLSIAGVPPFNGFISKLLIFESSIWSAKQSEVFFLIRGAFIVFGIISVFISAVTLAS 451 Query: 436 LVRMAARVLMAKPPQAVN-RGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIV 494 ++ M K ++ + +L W +IL + L G P ++I+ A V Sbjct: 452 FLKFVNSAFMGKLQGTIDEKRNLPWSMVLSQIILAFICLLAGL-FPFIPLKIIYNA---V 507 Query: 495 LSGTHDLPAQRSTW 508 ++ + LP S + Sbjct: 508 IASSGSLPKFSSVF 521 >UniRef50_Q9UYN2 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3 n=1 Tax=Pyrococcus abyssi RepID=Q9UYN2_PYRAB Length = 647 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 125/435 (28%), Positives = 208/435 (47%), Gaps = 59/435 (13%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 GL ++IDG +F+ ILG++GF +YSI YM E P Y ++ FL +M Sbjct: 56 GLPVYIDGFSLIFMLILGILGFSASLYSIPYM-------ERHPGKEWVYAVAYNAFLLSM 108 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYII----------ICTVGV 176 L++ ++NL+ E TLSS L I + KY I ++GV Sbjct: 109 FLILITSNLVWFVFFWELMTLSSFIL--ITWDEKDFDPGIKYYIAMHILTTFPLFISLGV 166 Query: 177 AFGLFGTV--LVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 ++ G++ + Y N S+ A LL + LI F K+G Sbjct: 167 SYSFLGSLDAMTYPNLKSLPSSAT--------------------LLLYASFLIAFMAKSG 206 Query: 235 LFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNR---LLLI 291 + P H W+P + APS +S+LL+ + A+ LIR I+ A+ + P L+ + Sbjct: 207 IVPFHFWVPSTYKVAPSNISSLLAGAMEKIAVFGLIR---IMYTALPT--PKSIGYLVAL 261 Query: 292 FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG-------GPLGIFAALLHI 344 G +++ V + L + D K+LLAY S+ MG + + +GIG G LG+FA + H Sbjct: 262 LGAVTLTVGTLYALRESDAKKLLAYHSIGQMGYIWLGIGIGLSLDSPLGALGMFAGIFHA 321 Query: 345 LNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 LNHSL K LF +G+V G +L+ + G+ + M +T + +LA++G+PPFN FL Sbjct: 322 LNHSLFKGSLFLSAGSVEYATGETNLDNLGGLAERMKWTGLATLLASLAISGVPPFNGFL 381 Query: 405 SEFMTITAGLARNHLLI---IVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLT 461 S+++ TAG +++ VL + + + LA ++ + + + ++ Sbjct: 382 SKWLIYTAGYNSGDMVLSFGAVLAVFISAVTLASFIKFYTSQFGGESERYRDVSEVPLSM 441 Query: 462 TSPMVILLVMMLAMG 476 P +IL + L +G Sbjct: 442 VVPQLILSSLCLIIG 456 >UniRef50_B7R512 NADH dehydrogenase subunit n n=1 Tax=Thermococcus sp. AM4 RepID=B7R512_9EURY Length = 524 Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 123/398 (30%), Positives = 196/398 (49%), Gaps = 30/398 (7%) Query: 33 RTVTVLHSL-GITLLLILALWVVQTAADAGE--IFAAGLWL-------HIDGLGGLFLAI 82 R + + +SL +T+ + +W+ A + E ++A G W+ +D L L + Sbjct: 28 RGIVIAYSLTALTVTFLAGIWLFDRAYSSNEPLVYAFGNWIAPIGIVFEVDKLSAT-LVL 86 Query: 83 LGVIGFL-TGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAA 141 GFL GIYS ++R HG L YY F L + + + Sbjct: 87 TATFGFLLAGIYSAKFIR---THG------LEFYYTFLLGLEAGTLGAFMTGDAFNTFVM 137 Query: 142 IEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMA 200 +E S+ +VG Y RS ++E A+KY I V + +YA+ ++ A Sbjct: 138 LEVIGASAYAIVGFYRNRSEAVEGAFKYGISGAVATSLYFLALGFIYASFGTLNMADLSA 197 Query: 201 IFWSEVLKQSSLL--DPTLMLLAFVFLLIGFG-TKTGLFPMHAWLPDAHSEAPSPVSALL 257 F ++ L +PTL L+ F L + K+ +FP H WLP A+S AP PV A+L Sbjct: 198 KFHGVSFPVTTKLFGEPTLALVIFFALTLAMVIVKSAIFPGHYWLPSAYSGAPIPVGAIL 257 Query: 258 SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA---AFFILVQRDIKRLL 314 S+ + + +L RY + G F L L+F +L A A + +LVQ+++KRL+ Sbjct: 258 SSFVEVVGIYLLARYTYTLFH--GLPFWRILSLVFLVLGTATAFLGSIMMLVQKNVKRLI 315 Query: 315 AYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVC 374 AYS++ +MG + + LG+G L + A HI+NH++AKTLLF G + + GT + + Sbjct: 316 AYSTILHMGYLFMTLGVGTQLALMAIDFHIVNHAIAKTLLFFTVGAFIYRRGTVKVEDLA 375 Query: 375 GMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 G+ + MP LFG L+L G+PP N+F S+ + A Sbjct: 376 GVGREMPINTFLFGLATLSLVGVPPLNVFFSKMLIFNA 413 >UniRef50_C8XAR9 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XAR9_NAKMY Length = 674 Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 124/364 (34%), Positives = 189/364 (51%), Gaps = 38/364 (10%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 GL +D LGG+FLA+ G + G+Y IGY R HG + LF+ M Sbjct: 70 GLLFTVDPLGGVFLAVTGGVSAAVGLYGIGYCRE---HG----LDARGVQAVLPLFVLAM 122 Query: 127 LLV---VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWK-YIIICTVGVAFGLFG 182 +LV + L+++W + T+L +V + +R + +A + Y ++ +G+ L G Sbjct: 123 MLVPLAASVGTLLLVWELMALTSL--LLVVAEHRRRPEVASAGRWYAVMTHLGLVAILIG 180 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 ++ A+AA ++ + + L P + L FV IGFG+K G+ P+HAWL Sbjct: 181 LLVFAAHAADGS--------FAALRAAAPGLSPAVAGLVFVATGIGFGSKAGIVPLHAWL 232 Query: 243 PDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAF 302 P AH EAPS VSAL+SA ++N + ++R + G+D LL+ G L A + Sbjct: 233 PRAHPEAPSNVSALMSAAMVNLGIYGIVRVGFDLLA--GADTGWWWLLVLG-LGAGSAIY 289 Query: 303 FIL---VQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFA-----------ALLHILNHS 348 IL V ++KRLL S+ ENMGLV + +G G G ALLH++NH+ Sbjct: 290 GILQAAVGTNLKRLLGNSTTENMGLVLIGVGAAGFFGTTGNPPLAGLALAAALLHLVNHA 349 Query: 349 LAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 KT+LF +G V+ G RDL+ + G+ MP T FG GALA + +PP F+SE++ Sbjct: 350 AFKTVLFQAAGAVVAATGRRDLDDLGGLNTRMPATTTAFGIGALAASALPPGAAFVSEWL 409 Query: 409 TITA 412 + A Sbjct: 410 LLQA 413 >UniRef50_D1B457 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Campylobacterales RepID=D1B457_SULD5 Length = 646 Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 122/424 (28%), Positives = 193/424 (45%), Gaps = 73/424 (17%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 ++ LG F ++ +I F ++S Y + L+ + F+ F+ +MLLV Sbjct: 66 FRLEPLGMFFSFLVSMIAFAVSLFSFDYAKFYEKKANLAV-----FASLFNAFILSMLLV 120 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 V S+N+ E TL SA L+ I + S + Y+ I +G AF L +L+ A+ Sbjct: 121 VASDNVFSFMLLWEVMTLLSALLILINDGKESSKNIMIYLGIAQIG-AFCLMVALLIMAS 179 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG--------------TKTGL 235 A + F + IGFG +K G+ Sbjct: 180 FADSFEFSH-----------------------FNEMNIGFGASLTLFVLLLVGLGSKAGM 216 Query: 236 FPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGML 295 FP H WLP A+ E PS SAL+S V++ AL I++ +++ Q + + +LL G L Sbjct: 217 FPFHVWLPVAYCECPSNASALMSGVMIKVALFAFIKFSLLLPQWVHFGY---ILLFMGAL 273 Query: 296 SVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGP-------------LGIFAALL 342 S + LV D K +AYSS EN+G++ LG+GG LG AA Sbjct: 274 SCVFGIMYALVSNDYKASIAYSSCENVGIIF--LGLGGAFYGLGANSPTLALLGFIAAFF 331 Query: 343 HILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNI 402 HILNHS+ K+LLF SGNV TR+++ + G+ K MP T+++F +A+ +PP N Sbjct: 332 HILNHSVFKSLLFMLSGNVYTATLTRNMDTLGGLHKKMPLTSLIFCVAVVAMCALPPLNG 391 Query: 403 FLSEFMT--------ITAGLARNHLLIIVLLLLLLT--LVLAGLVRMAARVLMAKP--PQ 450 F SE++ + AG+A ++ L +T + L ++ + + P PQ Sbjct: 392 FASEWVIYKTMVMGGVDAGIASRFFFATAIIALSITGAMALMAFAKVYGSIFLGLPREPQ 451 Query: 451 AVNR 454 + Sbjct: 452 KMEE 455 >UniRef50_D1Z235 Putative NADH:ubiquinone dehydrogenase n=1 Tax=Methanocella paludicola SANAE RepID=D1Z235_METPS Length = 490 Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 165/299 (55%), Gaps = 23/299 (7%) Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTV 174 Y+ + L + M + ++ N+IVM +EA T+ SA L+ + ++ A + Y+ I V Sbjct: 103 YFIMYFLLMGMMSGLASTYNVIVMLIFLEAATVISAVLILFGRTKKAIRATYVYLAISIV 162 Query: 175 GVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 V + G ++Y +A ++ L ++ + + LLA +F GFGTK G Sbjct: 163 EVILVVTGAFILYNDAGTLDLNK---------LTAGAVSEGDMFLLAMLFFF-GFGTKAG 212 Query: 235 LFPMHA-WLPDAHSEAPSPVSALLSAVLLNCALLVLIR----YYIIICQAIGSDFPNRLL 289 L P+ WLP AHSEAP P+SA +S +L+ +++ +++ +Y+I S +L Sbjct: 213 LLPLGIIWLPSAHSEAPPPISATMSGILIKASVVAMVKAIYPFYLI------SGVETLIL 266 Query: 290 LI--FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNH 347 ++ FG+L++ V L+ DIKRLLA+ S+ MG + + G+ P ++ AL HI NH Sbjct: 267 VVIGFGVLNMLVGVIMALLSEDIKRLLAFHSISQMGYIIMGFGLATPAAVYGALFHITNH 326 Query: 348 SLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 L K LF +G ++L+ TR ++ + G++K MP T + F +LA++G+P N F+S+ Sbjct: 327 MLFKGCLFLITGALILRVNTRQIHRMGGLMKQMPLTGLCFLIASLAMSGVPLLNGFVSK 385 >UniRef50_C0YTV8 NADH dehydrogenase I chain L n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YTV8_9FLAO Length = 637 Score = 141 bits (355), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 110/365 (30%), Positives = 187/365 (51%), Gaps = 32/365 (8%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 ID L + + I+ IG L +YSIGYM H+ ++ + +LF+F+MLL+ Sbjct: 79 FQIDQLSLMMVMIITGIGSLIHLYSIGYMSHDKG--------FYKFFTYLNLFIFSMLLL 130 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 V +N ++++ E L S L+G Y +AA K I+ +G L G ++ + Sbjct: 131 VMGSNYLILFIGWEGVGLCSYLLIGFWYTNEEYGKAARKAFIMNRIGDLALLIGIFMIAS 190 Query: 189 --NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 NA + AE A LD T+++ L IG K+ P++ WLPDA Sbjct: 191 QTNAVDYLSVAENA--------SKFELDGTVIIFITASLFIGATGKSAQVPLYTWLPDAM 242 Query: 247 SEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFP--NRLLLIFGMLSVAVAAFF 303 + P+PVSAL+ +A ++ + +++R + A P ++L G L+ A+A F+ Sbjct: 243 A-GPTPVSALIHAATMVTAGIYLVVRSNFLFTLA-----PTVQGVILFIGFLTAALAGFY 296 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLL 363 L Q DIK++LAYS+V +G + + LG+G A+ H++ H+ K LLF G+G+V+ Sbjct: 297 ALRQNDIKKVLAYSTVSQLGFMFIALGLGAYT---TAMFHVMTHAFFKALLFLGAGSVIH 353 Query: 364 KYGT-RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLII 422 +D+ + G+ K +P T F G LA++G P + +S+ + A A+N + + Sbjct: 354 AMSNEQDMRFMGGLKKYIPLTHATFLIGTLAISGFPLLSGMISKDEILVAAFAKNPVYWV 413 Query: 423 VLLLL 427 +L +L Sbjct: 414 ILFVL 418 >UniRef50_B3E6C5 NADH dehydrogenase (Quinone) n=4 Tax=Desulfuromonadales RepID=B3E6C5_GEOLS Length = 666 Score = 141 bits (355), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 111/327 (33%), Positives = 167/327 (51%), Gaps = 31/327 (9%) Query: 93 YSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFL 152 Y + Y+ V VTL F L L +M LV+ + + +++ A E LSS L Sbjct: 105 YGLAYLPAAVQPAVEKRVTL-----FSGLLLASMALVLVARDGLLLLIAWEVMALSSWLL 159 Query: 153 VGIYGQRSSLEAAWKYIIICT--VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQS 210 + Q ++ A ++ T +A +F +L + P A S Sbjct: 160 LMTDQQNLQVQRAGTVYLLATHTGSMALYVFFALLKGETGSFAFPAA-----------HS 208 Query: 211 SLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLI 270 L T+ L+ V LIGFG K G+ P+H WLP AH+ APS VSAL+S ++L + +I Sbjct: 209 LALGGTVTLVMLVAALIGFGAKAGIMPLHIWLPGAHANAPSHVSALMSGIMLKVGIYGII 268 Query: 271 RYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELG 330 R + Q + F L+L+ G +S QRD+KRLLA SS+EN+G++ + LG Sbjct: 269 RA-VSFFQQLPVWF-GWLVLLLGAVSAITGIALASAQRDLKRLLACSSIENIGIICIGLG 326 Query: 331 IG-----------GPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKI 379 + LG+ A +HI+NH+L K LLF GSG ++ GTR ++ + G+ +I Sbjct: 327 MALVGIQSGDRVLAILGLAGAFIHIINHALFKPLLFLGSGAIIHATGTRQIDRMGGLSRI 386 Query: 380 MPFTAVLFGGGALALAGMPPFNIFLSE 406 +P TA LF G+LA+ G+PP N F+ E Sbjct: 387 LPRTAPLFLVGSLAICGLPPLNGFVGE 413 >UniRef50_B4UA31 NADH dehydrogenase (Quinone) n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA31_HYDS0 Length = 633 Score = 141 bits (355), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 104/354 (29%), Positives = 178/354 (50%), Gaps = 37/354 (10%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 ++D L F+ I+ G + IY++ Y+ E ++ L + +F+ +M+LV Sbjct: 67 FYVDRLSLFFIGIVAFNGAINSIYTLDYIEEENYDKKILMTMLKN------IFILSMILV 120 Query: 130 VTSNNLIVMWAAIEATTLSSAFLV-GIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 + S N E ++ S FLV + + + +A+ YI++ +G AF L V Y Sbjct: 121 LLSANAFTFLLFWEVMSILSFFLVLWDFKKEENYKASLIYIVMTHIGTAFILLSFVGFYI 180 Query: 189 NAASV----MPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 N S+ + FW+ + F+F ++GFG K G+ +H WLP Sbjct: 181 NTNSLSFDHWQNLSLNTFWTTWI--------------FLFSVLGFGMKAGIIGLHNWLPK 226 Query: 245 AHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFI 304 AH APS VSAL+S +++ + + IRY+ + + F L+L G +++ Sbjct: 227 AHPVAPSFVSALMSGLMIKMPVYMFIRYWFYFIKQYPASF-GLLILTIGTITMLFGILNA 285 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKTL 353 VQ +K +LAYSS+EN+G++ V +G+ L + A+L HILNHSL K+L Sbjct: 286 SVQNRLKAMLAYSSMENIGIIYVGIGLAMIFKSLNVEYLYALALGASLFHILNHSLFKSL 345 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 LF +G+++ + T+++ + G +K P + G L+L +PPFN F+SE+ Sbjct: 346 LFMSAGSLMARAHTQEIAKLGGAIKYAPKLGTITLVGMLSLVALPPFNGFISEW 399 >UniRef50_B6YQ51 NADH dehydrogenase I subunit L n=32 Tax=Bacteroidetes RepID=B6YQ51_AZOPC Length = 637 Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 109/363 (30%), Positives = 180/363 (49%), Gaps = 21/363 (5%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 +D + + L ++ + + IYS+GYM+ E+ YY F LF F+ML +V Sbjct: 88 LDPISVMMLVVITTVSLMVHIYSLGYMKGEIGFQR--------YYAFLSLFSFSMLGLVV 139 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAA 191 + N+ M+ E +SS L+G Y + S AA K I T G +L+ + Sbjct: 140 ATNIFQMYIFWELVGVSSYLLIGFYYIKPSAVAASKKAFIVTRFADLGFLIGILILSYYT 199 Query: 192 SVMP----QAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHS 247 A A+ + + L ++ + A + +G K+ +FP+H WLPDA Sbjct: 200 RTFDFRALTANNAVLVTASTAGRTFLGLSVSVWALALIFMGGAGKSAMFPLHIWLPDA-M 258 Query: 248 EAPSPVSALLSAVLLNCALLVLI-RYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILV 306 E P+PVSAL+ A + A + LI R + + A S +++ G + A +V Sbjct: 259 EGPTPVSALIHAATMVVAGVYLITRLFPVYFFAAPSVL--KMIAFVGAFTSFFTAIIAVV 316 Query: 307 QRDIKRLLAYSSVENMGLVAVELGI---GG--PLGIFAALLHILNHSLAKTLLFCGSGNV 361 Q DIKR+LA+S++ + + LG+ GG LG A++ H+ H+ K LLF G+G+V Sbjct: 317 QTDIKRVLAFSTISQISYMMAALGVSKYGGYEGLGYTASMFHLFTHAFFKALLFLGAGSV 376 Query: 362 LLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLI 421 + + ++N +CG+ K MP T + F LA+AG+PPF+ F S+ + A L ++ Sbjct: 377 IHVVNSNEMNNMCGLHKYMPITNITFLIACLAIAGIPPFSGFYSKDEVLVATLHYQPIIF 436 Query: 422 IVL 424 +L Sbjct: 437 WIL 439 >UniRef50_Q1IS54 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Acidobacteria RepID=Q1IS54_ACIBL Length = 710 Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 117/361 (32%), Positives = 178/361 (49%), Gaps = 34/361 (9%) Query: 55 QTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 +TA+ A F A +D L ++L + +G L IYS GYM+H+ + Sbjct: 88 KTASGATAEFKAEAGFLLDPLSSIWLLFVTGVGMLIHIYSTGYMKHDGGY--------YR 139 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYII--- 170 ++G+ +LF+F+ML ++ NN +M+ E L S L+G Y ++S+ AA K I Sbjct: 140 FFGYLNLFMFSMLTLILGNNYAMMFVGWEGVGLCSYLLIGFYFHKKSASTAANKAFITNR 199 Query: 171 ICTVGVAFGLFGTVLVYA--NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIG 228 I GV G+F + N V A IF + + A + L IG Sbjct: 200 IGDAGVLVGMFTIAWYFGSINFTKVTQAARSGIFHT---------GDYWITFATIALFIG 250 Query: 229 FGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPN-- 286 K+ P++ WLPDA E P+PVSAL+ A + A + Y + A+ PN Sbjct: 251 ACGKSAQLPLYVWLPDA-MEGPTPVSALIHAATMVTAGV----YMVARSNALYILAPNSM 305 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 +++ I G L+ AA LVQ DIKR+LAYS+V +G + + LG+G A + H+ Sbjct: 306 KVVAIVGALTAVFAASIGLVQNDIKRVLAYSTVSQLGYMFLALGLG---AFTAGVFHVFT 362 Query: 347 HSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 H+ K LLF GSG+V+ G +D+ + + K +P T G LA+AG+PP F S Sbjct: 363 HAFFKALLFLGSGSVIHAMSGEQDMRFMGALRKKIPVTFWTMFAGTLAIAGIPPLAGFFS 422 Query: 406 E 406 + Sbjct: 423 K 423 >UniRef50_A7GV43 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=Bacillaceae RepID=A7GV43_BACCN Length = 620 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 124/413 (30%), Positives = 205/413 (49%), Gaps = 22/413 (5%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 ++ L L L I+ + FL +Y+ GYM+ + L +Y + LF F ML + Sbjct: 76 FEVNALNALMLLIVTTVSFLVHVYAKGYMQGDE--------RLSVFYAYLGLFTFAMLGL 127 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICT-VGVAFGLFGTVLVYA 188 V S NL+ ++ E L S L+G Y + +AA + I T +G A G +L++ Sbjct: 128 VISTNLLQLYVFWELVGLGSFLLIGFYFFKEEAKAAAQKAFIMTRIGDACLFIGMILLFW 187 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 A S + + + V Q+ + P+++ L +F+ IG K+G FP+H WLPDA E Sbjct: 188 QAGSF----DYDVIFKAV--QTEAISPSIITLTALFIFIGAVGKSGQFPLHTWLPDA-ME 240 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQR 308 P+PVSAL+ A + A + L+ + + S + + I G + AA LVQ Sbjct: 241 GPTPVSALIHAATMVAAGVYLVA--AMFPLFVASPVAMQTVAIVGGFTAIFAASIALVQT 298 Query: 309 DIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTR 368 DIKR+LAYS+V +G + + LG G + A++ H+ H+ K LLF +G+V+ T+ Sbjct: 299 DIKRILAYSTVSQLGYMMLALGSAGYV---ASIFHLTTHAFFKALLFLAAGSVIHAVHTQ 355 Query: 369 DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLL 428 +++ + G+ K M T +LF G A++G+P F+ F S+ + A + ++ VL +L Sbjct: 356 NIHEMGGLQKKMKVTGLLFLVGTFAISGVPFFSGFFSKDEILMATWMHGNYVLFVLAILA 415 Query: 429 LTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMG-THIP 480 L + R+ V + + + T PM L V +A+G H P Sbjct: 416 TFLTSFYMFRLYFLVFTGEERAKREVRESPRIMTLPMTALGVFAVAIGYIHTP 468 >UniRef50_C0GN23 NADH dehydrogenase (Quinone) n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GN23_9DELT Length = 515 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 108/375 (28%), Positives = 190/375 (50%), Gaps = 22/375 (5%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 G+ L +D L I+ + IY+ +R E+ P + +Y LF+ + Sbjct: 72 GIELVLDPLSAFISVIITASALMVMIYAHSNVRQEI------PGSSMGFYSLSMLFMGGL 125 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLV 186 + + + ++ +E + L+S L+ I G R +A++Y+++ T G F L G + Sbjct: 126 AGMAITGDFFNLFVFLEISALASYGLLAI-GTRRGPVSAFRYLVLGTAGAIFYLMGVAFI 184 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 S + A++A ++L + P +++ V +L+G K G+FP+H WLPDA+ Sbjct: 185 IIATGS-LNMADVA----KILPYAEYQRP--VIVGLVLILVGIIIKMGVFPIHHWLPDAY 237 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM--LSVAVAAFFI 304 S+A S +AL++ + A +LIR I +FP L ++ M LS+ + Sbjct: 238 SDASSTATALIAPIGTKVAAYILIRVMTI------YEFPPLLDVMTWMAGLSIVAGSILA 291 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK 364 + Q +IKR+LAYSSV N+G + + + + PL A+LHILNH+L K +LF +G +L Sbjct: 292 IAQTNIKRMLAYSSVANIGYIVLGVTLANPLAFIGAMLHILNHALMKLVLFMSAGGMLHS 351 Query: 365 YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVL 424 G+ ++ + G +MP+TA+ F AL++ G+PP F S+ I + + + + Sbjct: 352 VGSVSISRMRGFPTVMPWTALAFFIAALSMVGIPPTGGFFSKVYLIMGAIEAEAWIFVAI 411 Query: 425 LLLLLTLVLAGLVRM 439 ++L L L RM Sbjct: 412 IILSTLLAFVYLFRM 426 >UniRef50_C6MX91 NADH dehydrogenase (Quinone) n=1 Tax=Geobacter sp. M18 RepID=C6MX91_9DELT Length = 657 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 87/204 (42%), Positives = 119/204 (58%), Gaps = 25/204 (12%) Query: 222 FVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIG 281 F L GFG+K GL P+H WLP AH+ APS VSALLS V+L + ++R + Sbjct: 217 FALALAGFGSKAGLMPLHLWLPSAHANAPSHVSALLSGVMLKIGVYGILR--------VI 268 Query: 282 SDFPNR------LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGI---- 331 S FP R LL G+ S + Q+DIKRLLAYSS+EN+G+V +G+ Sbjct: 269 SFFPERPLWWGALLTAAGLTSAVMGICVASAQKDIKRLLAYSSIENLGIVTTGIGMFLLG 328 Query: 332 ---GGP----LGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTA 384 G LG+ AL H+LNH++ K LLF +G+V+ GTRDL+ + G+ + +PFTA Sbjct: 329 QGTGNHRLAFLGLAGALFHVLNHAIFKPLLFFCAGSVMHATGTRDLDRMGGLARRLPFTA 388 Query: 385 VLFGGGALALAGMPPFNIFLSEFM 408 GA+A+ G+PPFN F SE + Sbjct: 389 FFALCGAVAICGLPPFNGFASEML 412 >UniRef50_B6YTY8 Membrane bound hydrogenase, MbhH subunit n=9 Tax=Thermococcaceae RepID=B6YTY8_THEON Length = 532 Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 110/375 (29%), Positives = 183/375 (48%), Gaps = 42/375 (11%) Query: 71 HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVV 130 +D G + + I+ + + IYSIGYM+H+ L YY + ML + Sbjct: 84 EVDLFGAIMVFIVAFVSLMAVIYSIGYMKHDTG--------LDKYYTLILILELGMLGIA 135 Query: 131 TSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 + +L + +E +++S LV +EA KY+ + ++ AF L G L+Y Sbjct: 136 ITGDLFNFYVFLEIMSIASYALVAFRNDTWEGIEAGIKYMFVGSIASAFVLLGIALLYGQ 195 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLML-LAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 ++ M ++++ +PT+ +A + G K+G P+H WL DAH Sbjct: 196 YGTL----TMGYLAVKIVQ-----NPTVTAKVALALFIAGLLFKSGASPVHMWLADAHPA 246 Query: 249 APSPVSALLSAVLLNCALL-----VLIRYYI-----IICQAIGSDFPNR-----LLLIFG 293 APS +SA+LS +++ + +L Y I+ +A N +++IF Sbjct: 247 APSSISAMLSGLVIKIGGIYAIARILFSIYTPMAHSIVLEAYLQPHINMSAIGWIIIIFA 306 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG--------GPLGIFAALLHIL 345 L++ + ++Q D+KRLLAYSSV +G + + LGI G + + A+ H + Sbjct: 307 CLTLIIGNAMAVIQTDMKRLLAYSSVGQIGYILLGLGISIAAYGTQTGEIALAGAIYHTV 366 Query: 346 NHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 NH+L K LLF +G V+ + GTR+LN + G+ K MP T F GA A+ GMPP N F S Sbjct: 367 NHALMKALLFLVAGVVIHQLGTRNLNELSGLAKTMPKTTFAFLIGAAAIVGMPPLNGFAS 426 Query: 406 EFMTITAGLARNHLL 420 +++ + N +L Sbjct: 427 KWLIYESSAIFNPIL 441 >UniRef50_A7HGW3 NADH dehydrogenase (Quinone) n=4 Tax=Anaeromyxobacter RepID=A7HGW3_ANADF Length = 670 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 115/330 (34%), Positives = 169/330 (51%), Gaps = 28/330 (8%) Query: 68 LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 L L +D L +F + +G ++ GYMR AH L+ +L + F++ L +M Sbjct: 69 LALGLDPLSAVFAVAIFALGLAAAVFGAGYMR---AH--LARRSLGAFLFSFNVLLASMA 123 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWK-YIIICTVGVAFGLFGTVLV 186 L+V + ++ A EA T+SS LVG+ + ++ A + Y++ +G AF LF L Sbjct: 124 LLVAARQALLFIVAWEAMTVSSFLLVGLEHEDGAVRMATRTYLVASHLGAAF-LFALFLT 182 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 +AA + F + + L F F L+GFGTK GL P+H WLP+AH Sbjct: 183 LGHAAGSL------RFEAFAALGAGARGALPATLLFAFALVGFGTKAGLVPLHVWLPEAH 236 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQA-IGSDFPNRLLLIFGMLSVAVAAFFIL 305 APS VSAL+S VL+ + ++R + A +G L G+L A L Sbjct: 237 PAAPSHVSALMSGVLVKMGIYGILRALSFLPPAPVGHGL---ALAAVGLLGAVAALLLAL 293 Query: 306 VQRDIKRLLAYSSVENMGLVA-----------VELGIGGPLGIFAALLHILNHSLAKTLL 354 QRD+KR+LAYS+VEN+GLVA LG+ ALLH+ NH+L K L Sbjct: 294 GQRDLKRILAYSTVENVGLVAFGLGVGLAGAAAGAPTVAALGVAGALLHVWNHALMKGLA 353 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTA 384 F G+G V+ GTRD+ + G+L+ MP +A Sbjct: 354 FMGAGAVVHGAGTRDVERMGGLLRRMPVSA 383 >UniRef50_A5UV30 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria RepID=A5UV30_ROSS1 Length = 793 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 123/383 (32%), Positives = 205/383 (53%), Gaps = 23/383 (6%) Query: 68 LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 L IDGL LF ++ IG L IY+ GY+ ++ G + + L +F+ ML Sbjct: 68 LSFRIDGLSLLFALLITGIGTLVLIYAGGYLANDPMLGRMLTLLL--------IFMAAML 119 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVAFGLFGTVLV 186 +VTS+NLI ++ E TT+SS L+G + + +AA + +++ +G L +++ Sbjct: 120 GIVTSDNLIALFVFWELTTISSYMLIGYKHEYEKARKAALQSLLVTGIG-GLALLAGIVL 178 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 A + +EM + +V++ L L L+ F G TK+ FP H WLP A Sbjct: 179 LGQIAGTLELSEM-LKQGDVVRAHPLYGGILALVLF-----GAFTKSAQFPFHFWLPGAM 232 Query: 247 SEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFIL 305 EAP+PVS+ L SA ++ + +L R ++ G++ LL FG ++ V +F + Sbjct: 233 -EAPTPVSSYLHSATMVKAGVFLLARLNPVLG---GTEAWQLLLTFFGGATMIVGSFLAV 288 Query: 306 VQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY 365 Q D+KR+LAY++V +G + + +G+G I AA++ L H+L K LF +G+V + Sbjct: 289 QQTDLKRILAYTTVSALGTLVLLIGVGTDDAIKAAMVFTLGHALYKGALFQVAGSVDHET 348 Query: 366 GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLL 425 G RD++ + G+ MP TA AL++AG+PP F+++ + A L+ L+ + LL Sbjct: 349 GARDISQLGGLRTAMPITAAAAMLAALSMAGLPPMLGFIAKEVQYKANLSEPILIGVALL 408 Query: 426 LLLLTLVLAGLVRMAARVLMAKP 448 +LT+V AG V + RV +P Sbjct: 409 TNILTVVAAGFVSL--RVFTGQP 429 >UniRef50_Q895D7 Sodium/proton antiporter shaD n=1 Tax=Clostridium tetani RepID=Q895D7_CLOTE Length = 490 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 99/340 (29%), Positives = 187/340 (55%), Gaps = 18/340 (5%) Query: 93 YSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFL 152 YSI + H++ + P YY + + ++L +V SN++ ++ IE L+S + Sbjct: 97 YSIYSIEHDIKKSRI-PF----YYFLVSVLVGSLLGMVFSNDIFNVFVFIEIGNLASCGI 151 Query: 153 VGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSL 212 V I ++ +++A KY+I+ +G L G +Y S+ M +E++K + + Sbjct: 152 VVIKDKKENIKAGMKYLIMSCLGSGLVLMGIAFLY----SITGHLNMTYMHNELVK-NYM 206 Query: 213 LDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRY 272 L+L++ +G G K+ +FP+H WLPDAHS AP+ SALLS+++L ++ LI+ Sbjct: 207 NHKNLLLISMGLFTVGLGVKSAMFPLHTWLPDAHSSAPTSSSALLSSLVLKGYVIFLIK- 265 Query: 273 YIIICQAIGSDFPN-----RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAV 327 ++ + G D +++LI G + + +VQ++ KR++AYS+V MG + Sbjct: 266 --MLFRVFGIDLLREFSILKVILILGCAGMIFGSLLAIVQKNFKRVIAYSTVAQMGYIFF 323 Query: 328 ELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLF 387 LG+G +G ++ HI+ H++ K+ LF +G+++ G +DL+ + G+ MP+T LF Sbjct: 324 ALGLGTEMGFIISIFHIVGHAITKSALFLCAGDIIKGTGEKDLDKLKGVGAEMPYTLALF 383 Query: 388 GGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLL 427 +L++ G+P F+S++ A + ++IV++LL Sbjct: 384 FIASLSMIGIPLLPGFISKWYLALASIESQRPILIVIILL 423 >UniRef50_C6PUG7 NADH dehydrogenase (Quinone) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG7_9CLOT Length = 594 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 112/338 (33%), Positives = 169/338 (50%), Gaps = 48/338 (14%) Query: 92 IYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLF--TMLLVVTSNN---LIVMWAAIEATT 146 IYSIGY G+ S Y F + LF +ML VV + + IV W + A + Sbjct: 32 IYSIGYTAEY--KGKYSVK-----YNFMLMLLFAASMLCVVLARDSITFIVFWEVMSAVS 84 Query: 147 LSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSE 205 FLV Y + ++ + Y I+ + GLF ++ + + + +I + + Sbjct: 85 F---FLVVYEYKNKENIRSGIMYFIMTHIS---GLFLMIMF-----AFLYKYTGSISFDK 133 Query: 206 VLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCA 265 + S+ + + F F ++GFG K GL P+H WLP AH APS SAL+S V+L A Sbjct: 134 FYQLSNDFTISQKYIIFTFAILGFGAKAGLLPLHGWLPKAHPSAPSNASALMSGVMLKVA 193 Query: 266 LLVLIRYYIIICQAIGSDFPNRLLL------IFGMLSVAVAAFFILVQRDIKRLLAYSSV 319 + LIR + + L+L IF +L+ LVQ+DIK+LLAYSS Sbjct: 194 IYGLIRVTFTFIKVLPLKAALLLVLLGAVTAIFSVLNA-------LVQKDIKKLLAYSSA 246 Query: 320 ENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTR 368 EN+G++ LG+ L + AAL HI NH++ K+LLF +G+VL GT+ Sbjct: 247 ENIGIIISTLGLSLVFYNLNLNSFANLTLIAALFHIFNHAIFKSLLFASAGSVLYSTGTK 306 Query: 369 DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 ++N + G+ K M F A+ G A++ +PP N F SE Sbjct: 307 NMNELGGLYKKMKFAAICAFIGTAAISAIPPLNGFASE 344 >UniRef50_B5IAP3 NADH-Ubiquinone/plastoquinone (Complex I), domain protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IAP3_9EURY Length = 472 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 95/362 (26%), Positives = 177/362 (48%), Gaps = 26/362 (7%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 G+ L + LG + I+ ++ F+ IY++ + + Y + L + Sbjct: 68 GIVLMVGPLGAIIALIINIVAFIISIYNLKVEKEPI----------VKYSMLYLLLVMGS 117 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLV 186 +V + +L ++ +E T+++S L + A KY+II ++G F L G L+ Sbjct: 118 TGMVLTGDLFNLFVFLEVTSIASYGLAAYNKDKEGFMGAMKYVIIGSIGSTFVLIGITLI 177 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 Y+ ++ ++ + +DP + ++AF L +GFG + +FP++ W+PDA+ Sbjct: 178 YSQLRTLN--------MLDIAARIGTMDPYVKIIAFTSLFLGFGVEAEMFPLNTWVPDAY 229 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRL--LLIFGMLSVAVAAFFI 304 AP P+SA +++ + L R + F N L ++I G+L+V Sbjct: 230 DGAPHPISAAFASLPAKAGIFALARVIFTMF-----SFTNFLWFVVIMGLLTVFFGEIIA 284 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK 364 Q+++K++LAYSS+ MG++ + LGIG L + A ++ H+L K LLF +G ++ Sbjct: 285 YTQKNLKKMLAYSSIGQMGMIIMGLGIGTTLAVEGAFYQMIAHALGKALLFIAAGFLIYA 344 Query: 365 YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVL 424 + + + GM + P + GAL++ GMPPF F +F + G ++ + II L Sbjct: 345 AKSNKIEDMKGMAR-NPLIGIPLLIGALSIMGMPPFAGFYGKFFILMGGFSQGYYAIIAL 403 Query: 425 LL 426 L Sbjct: 404 FL 405 >UniRef50_A6DPK7 NADH-ubiquinone/plastoquinone family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPK7_9BACT Length = 766 Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 117/363 (32%), Positives = 190/363 (52%), Gaps = 21/363 (5%) Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 F L +DGL L ++ IG L IY+ GY++ A+ +Y +F+ Sbjct: 66 FGINLNFRLDGLSFLMALLITGIGTLILIYAAGYLKDYKAN--------TRFYTIIQIFM 117 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGT 183 ML +V S+NLI M+ E TT+SS LVG + +I T G + Sbjct: 118 AAMLGLVLSDNLISMFIFWELTTVSSFLLVGFNHENPDARKKALQALIVTAGGGLAMLAG 177 Query: 184 VLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLP 243 +L+ N A +E+ I SE++K L + ++L+ +G TK+ FP H WLP Sbjct: 178 LLLLGNIAGTYQVSEL-IQHSELIKNHKLYEAVVILVC-----LGAFTKSAQFPFHFWLP 231 Query: 244 DAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAF 302 +A + AP+PVSA L SA ++ + +L R ++ G+DF LL+ G ++ +AA Sbjct: 232 NAMA-APTPVSAYLHSATMVKAGVFLLARLTPVLG---GTDFWMYLLVCVGGFTMLLAAT 287 Query: 303 FILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVL 362 L+ RD+K++LAYS++ +G++ + +G+G AA++ + H+L K LF +G++ Sbjct: 288 LGLIYRDLKKILAYSTLSVLGIITLLIGMGTEFSFKAAIMMLFAHALYKATLFMVAGSID 347 Query: 363 LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLII 422 + GTRD+ + G+ K+MP+T AL+ AG PPF FL++ G A +H L Sbjct: 348 HEAGTRDITKLRGLRKVMPWTFAAAALAALSQAGFPPFTGFLAK--EYFYGSALDHNLKA 405 Query: 423 VLL 425 VL+ Sbjct: 406 VLI 408 >UniRef50_UPI00003845F5 COG0651: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003845F5 Length = 581 Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 115/351 (32%), Positives = 183/351 (52%), Gaps = 31/351 (8%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 +D L LF+ ++ + Y IGY H ++P F+ LFLF M V Sbjct: 44 FRLDNLSALFMVVVNLASAAASAYGIGYCSHLPEPRRVTP--------FYPLFLFGMNTV 95 Query: 130 VTSNNLIVMWAAIEATTLSSAFLV-GIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 + +++ + A E +LSS LV + + AA+ Y+++ FG F + + Sbjct: 96 LIADDAFMFLVAWEFMSLSSWLLVLADHKNAENRRAAFVYLVM----ACFGTFCLLTCFG 151 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 +M E A +S + +++ LD L + L+G G+K GL P+HAWLP AH Sbjct: 152 ----LMAGGEGAYSFSAM--RAAKLDGIAGFLVVLLALLGAGSKAGLVPLHAWLPLAHPA 205 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQR 308 APS VSAL+S V+ AL LIR + + + +++I G+ +V + + ++Q Sbjct: 206 APSHVSALMSGVMTKVALYGLIRILFDLHGHVNWAWGAAMMVIGGITAV-MGVLYAILQD 264 Query: 309 DIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKTLLFCG 357 D+K+LLAYS+VEN+G+V + LG+ L + A L HI+NHS+ KTL F Sbjct: 265 DLKKLLAYSTVENIGVVVIGLGLAIAFKGSGEKTLAALALVAGLYHIVNHSIFKTLWFLS 324 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 +G V+ G RDL + G+ K MP+ V GA+A++ +PP N F+SE++ Sbjct: 325 AGAVITATGERDLGKLGGLTKRMPWNGVAALVGAIAISALPPLNGFVSEWL 375 >UniRef50_A3DNF9 Membrane bound hydrogenase subunit mbhH n=1 Tax=Staphylothermus marinus F1 RepID=A3DNF9_STAMF Length = 550 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 114/422 (27%), Positives = 208/422 (49%), Gaps = 45/422 (10%) Query: 92 IYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAF 151 IYS YMR E + YY L M+ +V + ++ ++ IE +S+ Sbjct: 103 IYSWWYMRSEEG--------VEWYYTLLLLLEAAMIGIVYTGDIFNLFVMIELLAISAYG 154 Query: 152 LVGIY-GQRSSLEAAWKYIIICTVGVA---------FGLFGTV-----LVYANAASVMPQ 196 LV + +R ++EAA KY +I +G +GTV V + +A + + Sbjct: 155 LVAFHRDRREAIEAAVKYSLIGATATTMFFLAIVFIYGTYGTVNMADLAVKSRSAWICAE 214 Query: 197 AEMAIFWSEVLKQSSLLDPTL-MLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSA 255 AE + ++ +S +P L +A F L F K +FP H WLPDAH EAP+PVSA Sbjct: 215 AENVCKFFSIMSGNSYGNPILATAIAIAFALWAFTFKAAIFPNHFWLPDAHPEAPTPVSA 274 Query: 256 LLSAVLLNCALLVLIR-YYIIICQAIGSDFPNR-----------LLLIFGMLSVAVAAFF 303 LS +++ +R Y + D P+ ++++ G +S + + Sbjct: 275 ALSGLVVKMGAYATVRIMYTVFGINSLIDVPSPSGVSLRDTLMFIIMLLGAISAIIGSLV 334 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIGG--------PLGIFAALLHILNHSLAKTLLF 355 +++Q D+KR+LAYS++ ++G++ + +G G L I A LHI+NHS KTL F Sbjct: 335 MVIQNDVKRILAYSTIAHLGMIFMGIGAGLRGLNTTVLSLVIVAVTLHIINHSFGKTLAF 394 Query: 356 CGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLA 415 SG + GTR++ + G+ ++ P T+ L L G+PPF F S+ + A + Sbjct: 395 LSSGIFIKATGTRNILQMRGVGRLTPITSTALIISLLHLLGVPPFGGFFSKLLLFNALMM 454 Query: 416 RNHLLIIVLLLLLLTLVLAGLVRMAARVLM-AKPPQAVNRGDLGWLTTSPMVILLVMMLA 474 L+ ++L+L + + G +R+ +++ +P + + + +++ +++L++++L Sbjct: 455 SGQLVFALILILSTAISMLGYMRIIVNLIIPPRPSRLIGKVKENPISSFTLIVLVLIILG 514 Query: 475 MG 476 +G Sbjct: 515 LG 516 >UniRef50_B6YT76 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YT76_THEON Length = 659 Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 113/360 (31%), Positives = 184/360 (51%), Gaps = 31/360 (8%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 G+ L ID L FL I+ ++ + +YSI YM EV P+ YG F+ ++ Sbjct: 59 GIPLIIDSLSLPFLFIIALLSLVVSVYSISYM--EVHRDTGRPLAYTILYG---TFVLSI 113 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTV-L 185 + V ++NL+ E TL+S V Q +A KY++ + LF + + Sbjct: 114 VFVALTSNLLWFVFFWELMTLTSFIFVSWREQ----DAGIKYLLTMQLANTVPLFVALGI 169 Query: 186 VYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDA 245 +Y+ S ++ ++ + + +S L P + L + L+ F K+G P W+PDA Sbjct: 170 IYSATGS------FSVDYATLREVASSLSPVQLKLLYAMFLVTFLAKSGSVPFQFWVPDA 223 Query: 246 HSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIG-SDFPNRLLLIFGMLSVAVAAFFI 304 + APS +++L++ V+ A+ LIR ++C A+ S+ +L+I G+L++ + Sbjct: 224 YEAAPSNIASLMAGVMEKMAVYGLIR---LLCNALPCSEGIGYVLVIVGILTMTFGTLYA 280 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKTL 353 L + KRLLAYSSV MG + +G+G L A + H NH+L K L Sbjct: 281 LRETHAKRLLAYSSVGQMGYIWFAVGMGMIFLTMGMESLAYLAFLAGVFHSFNHTLFKGL 340 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 LF SGN GT DLN + G+ + MP++++ GAL+LAG+P F+ FLS++M AG Sbjct: 341 LFLISGNFEYSAGTADLNELGGLRRAMPYSSLFTVIGALSLAGVPLFSGFLSKWMIYQAG 400 >UniRef50_C6HXN7 NADH/Ubiquinone/plastoquinone (Complex I) (Fragment) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXN7_9BACT Length = 387 Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 108/383 (28%), Positives = 193/383 (50%), Gaps = 39/383 (10%) Query: 40 SLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMR 99 S+G+ L ++ LW D I + + L FL ++G++ + Y +GY + Sbjct: 31 SIGVLALAVIGLW------DFRSIHLWTPYFQMTPLRAWFLLVVGIVSTMAAWYRVGYQQ 84 Query: 100 HEVAHGELSPVTLCDYYGFF-HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ 158 H + GF+ F+ M V+ S + V A E +S LV + + Sbjct: 85 HNQV-----------FTGFWLPWFVLAMAAVILSQTVWVFMTAWEVMAATSFLLVVSHHE 133 Query: 159 RSS-LEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTL 217 ++A + Y+++ + L G +L+ A+ S+ A+ W+ ++ L Sbjct: 134 EPGVIKAGYIYLVMSQISAMAILAGLLLMAASLHSM----NFAL-WA---AKARFLPWET 185 Query: 218 MLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIIC 277 F L +GF K G+ P H WLP AH AP+PVS+L+S ++ + ++++ ++ Sbjct: 186 KSGVFALLTLGFAIKCGIIPFHVWLPRAHPVAPAPVSSLMSGAMIKLGVFGIVQFLLMDL 245 Query: 278 QAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGP--- 334 A +P +LL+ G +S + + L++ D+KRLLAY S+EN+G++ + LG+ G Sbjct: 246 GATALLWP-IVLLVLGAVSSLLGVLYALMEHDLKRLLAYHSIENIGIIFLGLGVMGVGID 304 Query: 335 --------LGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVL 386 +G+ A+L H LNH+L K+ LF +G V GT D + G+++ +P A+ Sbjct: 305 LHHPQIAVVGLVASLFHTLNHALFKSQLFLAAGAVEQHTGTLDAEHLGGLIRTIPGVALG 364 Query: 387 FGGGALALAGMPPFNIFLSEFMT 409 F G++A++ +PPFN F+SE++T Sbjct: 365 FLLGSMAISALPPFNGFVSEWLT 387 >UniRef50_A9F578 NADH dehydrogenase I chain M n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F578_SORC5 Length = 754 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 124/446 (27%), Positives = 201/446 (45%), Gaps = 42/446 (9%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQ------TAAD 59 + ++L PLL + F R R + ++ + + + L+LA W+ T AD Sbjct: 194 ILSILTFLPLLGVVAVFLAHLLRYRDDRKLRLMTVVLMGVNLVLAAWLYAQFDRGFTRAD 253 Query: 60 AGEIF---AAGLWLH---------IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGEL 107 + + G+W+ +DG+ + + +I F+ + S Y H+ Sbjct: 254 GNDGYQFIEHGVWIRSLNVEYFVGVDGVSISMVLLTALISFVGALAS--YSVHD------ 305 Query: 108 SPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWK 167 L Y+ ++L + M V + +L + + E L FL+GI+G AA K Sbjct: 306 ---QLKGYFAMYNLLVTGMFGVFIALDLFLFFVFWEVMLLPMYFLIGIWGGPRREYAAIK 362 Query: 168 YIIICTVGVAFGLFGTVLVYANAAS---VMPQAEMAIFWSEVLKQSSLLDPTLMLLA--- 221 + + G F L + Y NA V QA IF L + + L +L Sbjct: 363 FFLYTLAGSVFMLLAFIWFYLNAGHTYLVDGQATERIFSIPELSRVAWAAQGLTILGVAA 422 Query: 222 ----FVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIR-YYIII 276 +++L +GF K +FP H WLPDAH EAP+ +S +L+ VLL ++R + ++ Sbjct: 423 VKVVWIWLFVGFAIKIPMFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGILRINFTLL 482 Query: 277 CQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLG 336 +A P + +FG++++ AF + Q D+K+L+AYSSV +MG + LG P G Sbjct: 483 PEATQWAAPA--MAVFGVVNILYGAFCAMAQSDLKKLVAYSSVSHMGFTLLALGAMTPQG 540 Query: 337 IFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAG 396 I A L+ + NH L +LF G V + TRD++ G+ MP L G +A G Sbjct: 541 IQACLVQMFNHGLITGMLFTLVGVVYDRVHTRDIDRFGGLASEMPLYTALVGFAFMASLG 600 Query: 397 MPPFNIFLSEFMTITAGLARNHLLII 422 +P + F E MT R L I Sbjct: 601 LPGLSGFWGEAMTFIGAFPRYRALTI 626 >UniRef50_A6TVL4 NADH dehydrogenase (Quinone) n=2 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVL4_ALKMQ Length = 694 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 129/407 (31%), Positives = 192/407 (47%), Gaps = 48/407 (11%) Query: 27 RRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF-------AAGLWLHIDGLGGLF 79 ++ R + V+ + +TLLL+LA++ Q A GE++ GL +D L + Sbjct: 109 KKSENLRDMAVVDTTFVTLLLVLAMYP-QVAQ--GEMYYHLPKLLGYGLSFKVDMLSFIM 165 Query: 80 LAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMW 139 A GV+ FL IY+ YM E +Y + + +L V + +L M+ Sbjct: 166 AATAGVLWFLVSIYAHDYMGIENHRNR--------FYLWMSVTFGGILGTVMAGDLFTMF 217 Query: 140 AAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEM 199 E T SS FLV + S+ A YI + G L G +L+YA ++ E Sbjct: 218 LFFEIMTFSSYFLVAHNQSKESILAGNSYIYMGVAGGLSILLGMILLYAYTGTL----EF 273 Query: 200 AIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA 259 SE+ + LM FV GFG K G+ P+H WLP AH AP+P SALLS Sbjct: 274 IPLASEIKDLGWV--KYLMTGLFVG---GFGIKAGMLPLHIWLPKAHPVAPTPASALLSG 328 Query: 260 VLLNCA----LLVLIRYYIIICQAIGSDFPNRL----------LLIFGMLSVAVAAFFIL 305 +L+ L V I +++ I S + + L ++ G++++ V F L Sbjct: 329 ILIKVGAYGILRVSISFFVPSITEI-SGYADSLWEVSQKLGAVIIWIGIITMVVGVFMAL 387 Query: 306 VQRDIKRLLAYSSVENMGL------VAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 Q ++K++LAY S+ MG VA LG G +G + H++NH+L K LLF G Sbjct: 388 QQSNMKKMLAYHSISQMGYIVMGIGVATYLGYKGAMGFSGGIYHMVNHALFKALLFMVVG 447 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 V L+ D+ + GM + MPFTA L AL + GMP FN F S+ Sbjct: 448 LVYLRTHELDMYKLGGMWRKMPFTAFLCIIAALGITGMPGFNGFASK 494 >UniRef50_B0BZT2 Proton-translocating NAD(P)H-quinone oxidoreductase, chain L n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0BZT2_ACAM1 Length = 671 Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 124/430 (28%), Positives = 202/430 (46%), Gaps = 46/430 (10%) Query: 16 LFSLLCFACR----KRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLH 71 LF L+ FA R S + ++VL S+ + + + A WVV A G+ LWL Sbjct: 10 LFPLIAFAVNLFFGHRLGSFSGWISVLTSVASSAIALPAAWVV---AQGGQYSHEWLWLT 66 Query: 72 I-----------DGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 + D L L ++ VIG L +YSIGYM HGE ++ + Sbjct: 67 LGNYDLNFGYLLDPLSATLLFVVTVIGTLIQVYSIGYM-----HGE---KYYHRFFAYVS 118 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 LF+ ML +V +NN + + A E L S L+G Y + S A + + T GL Sbjct: 119 LFMAAMLTLVIANNYVQYFMAWEVMGLCSYLLIGFYFHKDSAANASRKAFLTTRVGDVGL 178 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 F ++ + + L + L+ LA + G K+ FP+H Sbjct: 179 FLGIMTLFVTGGTLSFVD--------LPNAVETGAPLLWLAAPLIFCGTVGKSAQFPLHV 230 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLI-RYYIIICQAIGSDFPNRLLLIFGM--LSV 297 WLPDA E P+PVSAL+ A + A + L+ R +++ + FP + + G+ L+ Sbjct: 231 WLPDA-MEGPTPVSALIHAATMVAAGVYLVARSFVLF-----TSFPMVMPWVMGIGTLTA 284 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 +AA+ L DIK++LA+S++ +G + +G+GG + A H++ H+ K LLF G Sbjct: 285 FMAAYIALTATDIKKVLAFSTISQLGYMVTAMGLGG---MTAGTFHLMTHAFFKALLFLG 341 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 +G+V+ +D+ + G+ M T F +LA+AG+PP + F S+ + Sbjct: 342 AGSVIHGAHEQDIRQLGGLFSKMKHTGATFVIASLAIAGVPPLSGFWSKDEILLEAYQEG 401 Query: 418 HLLIIVLLLL 427 H ++ +LLL Sbjct: 402 HFVVYGVLLL 411 >UniRef50_A5UVF8 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Chloroflexaceae RepID=A5UVF8_ROSS1 Length = 654 Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 118/363 (32%), Positives = 192/363 (52%), Gaps = 37/363 (10%) Query: 86 IGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEAT 145 +G L IYSIGYM HG++ PV ++ F +LF+F ML++V ++NL++++ E Sbjct: 96 VGGLIHIYSIGYM-----HGDVRPVR---FFAFMNLFVFAMLMLVMADNLLLLFLGWEGV 147 Query: 146 TLSSAFLVGIYGQRSSL-------EAAWKYIIICTVGVA---------FGLFGTVLVYAN 189 L S L+G Y R S+ EAA K ++ VG A F FGT+ Y N Sbjct: 148 GLCSFLLIGHYFDRRSVPPGINPSEAAVKAFVVNRVGDAAMLAALFAIFTNFGTLSFYDN 207 Query: 190 AA-SVMPQAEMAIFWS-EVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHS 247 S+ + AI + E + + LM + +L+ K+ FP++ WLPDA + Sbjct: 208 PQLSISGYLDQAIVVAGETVDLGAFGQLPLMTGITLLMLVAVAGKSAQFPLYTWLPDAMA 267 Query: 248 EAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILV 306 P+PVSAL+ +A ++ + +++R + + Q S P +L+ G+++ + A + Sbjct: 268 -GPTPVSALIHAATMVTSGVYLIVRNHTLFDQP-ASAAP--WVLVIGVMTAFIGATAAVA 323 Query: 307 QRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG 366 Q DIKR+LAYS+V +G + +G+G + A + H+L H L K LLF +G+V+ G Sbjct: 324 QLDIKRVLAYSTVSQLGYMVAAVGMGAYV---AGMYHLLTHGLFKALLFLAAGSVIHGIG 380 Query: 367 T-RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL--ARNHLLIIV 423 +D+ + G+ +P T L+ GALAL+G+ P F S+ I AR+ L I+ Sbjct: 381 DHQDMRRMGGLRNALPTTFRLYVIGALALSGIFPLAGFWSKDEIIAHAWFDARSPLAAIM 440 Query: 424 LLL 426 L+L Sbjct: 441 LIL 443 >UniRef50_Q10880 Uncharacterized protein Rv0083/MT0090 n=15 Tax=Mycobacterium RepID=Y051_MYCTU Length = 640 Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 121/360 (33%), Positives = 183/360 (50%), Gaps = 35/360 (9%) Query: 66 AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFT 125 +G+ + +D LGG F+A+ G + G Y IGY+R E H P+ + LF+ Sbjct: 43 SGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRRE--HLGRVPMAVVP------LFVAA 94 Query: 126 MLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAA--WKYIIICTVGVAFGLFGT 183 MLLV + ++ A E ++S LV R + +A W Y ++ +G L G Sbjct: 95 MLLVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLW-YAVMTQLGFIAILVGL 153 Query: 184 VLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLP 243 V++ A S ++ D + F+ L+GFG+K GL P+HAWLP Sbjct: 154 VVLAAAGGS-----------DRFAGLGAVCD-GVRAAVFMLTLVGFGSKAGLVPLHAWLP 201 Query: 244 DAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFF 303 AH EAPSPVSAL+SA ++N + ++R+ + + G + LL G S Sbjct: 202 RAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGP-GPRWWGLALLAVGGTSALYGVLQ 260 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIG---------GPLGI--FAALLHILNHSLAKT 352 V D+KRLLAYS+ ENMGL+ + LG GP I AA+LH++ H+ K+ Sbjct: 261 ASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKS 320 Query: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 L F +G+VL G RDL+++ G+ + MP T V FG AL G+P F+SE++ + + Sbjct: 321 LAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQS 380 >UniRef50_Q9RGZ5 Na(+)/H(+) antiporter subunit A n=9 Tax=Firmicutes RepID=MRPA_BACPF Length = 805 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 117/359 (32%), Positives = 186/359 (51%), Gaps = 38/359 (10%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 +DGL LF ++ IG L +YSI Y+ + +L ++Y + +F+ ML VV Sbjct: 76 VDGLSLLFALLITGIGTLVILYSIFYLSKKTE-------SLNNFYVYLLMFMGAMLGVVL 128 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVG--VAFGLFGTVLVYA 188 S+NLIV++ E T+L+S+ L+ + R S A K ++I G G F + V Sbjct: 129 SDNLIVLYVFWELTSLASSLLISYWFHREKSTYGAQKSMLITVFGGFAMLGGFSLLYVMT 188 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 S+ E +++ S L P ++L+ L+G TK+ FP H WLPDA E Sbjct: 189 GTFSIRGIIENV----DLVTSSELFLPAMILV-----LLGAFTKSAQFPFHIWLPDAM-E 238 Query: 249 APSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQ 307 AP+PVSA L SA ++ + ++ R + GS LL FG++++ + + Q Sbjct: 239 APTPVSAYLHSATMVKAGIYLVARLTPVFA---GSAEWFWLLTGFGVVTLLWGSTSAVRQ 295 Query: 308 RDIKRLLAYSSVENMGLVAVELGIGG--------------PLGIFAALLHILNHSLAKTL 353 +D+K +LA+S+V +GL+ LG+G I AA+ H++NH+ K Sbjct: 296 KDLKGILAFSTVSQLGLIMTLLGLGSAAIYFGESVDPAFYSFAIMAAIFHLINHATFKGS 355 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LF +G + + GTRD+ + G++ IMP T + G ++AG+PPFN FLS+ M TA Sbjct: 356 LFMTAGIIDHETGTRDIRKLGGLMAIMPVTFTVSLIGLASMAGLPPFNGFLSKEMFFTA 414 >UniRef50_Q7UXC2 NADH dehydrogenase/oxidoreductase n=1 Tax=Rhodopirellula baltica RepID=Q7UXC2_RHOBA Length = 492 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 113/391 (28%), Positives = 201/391 (51%), Gaps = 29/391 (7%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 +D L + + IG + +Y+ + E+A + +LF T LL +T Sbjct: 74 VDSLSSFVMMFVSGIGAIVLVYAPKSVDDEIARSK------------HYLFYATYLLCLT 121 Query: 132 -------SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTV 184 + +L ++ +E ++LSS L+ + R + AA++Y+II ++G F L G Sbjct: 122 GLMGMCVTGDLFNVFVFLEISSLSSYALISLGQTRRAPLAAFQYLIIGSIGATFILIGIG 181 Query: 185 LVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 L+Y ++ MA + V ++ P +L+AF FL+IG K +FP+H WLP+ Sbjct: 182 LLYQMTGTL----NMADIAARVPHENG---PRTVLVAFGFLVIGLCVKMAVFPLHTWLPN 234 Query: 245 AHSEAPSPVSALLSAVLLNCALLVLIRY-YIIICQAIGSDF-P-NRLLLIFGMLSVAVAA 301 A++ APS V+ ++A ++ IR + II D+ P + L I ++ + VA+ Sbjct: 235 AYTYAPSVVTCFIAATATKVSVYAFIRVIFGIITPGFAFDYLPLDTELTILALVGIFVAS 294 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 + Q ++KRLLAYSSV +G + + + + P G+ A ++H+ NH+L K LF G Sbjct: 295 TAAIYQANVKRLLAYSSVAQIGYMILGISMSTPGGLTAGIVHMFNHALIKGGLFMIVGCF 354 Query: 362 LLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLI 421 L+ G+ L+ G K MP+T++ + G LAL G+P F+S+++ +TA + + + Sbjct: 355 ALRLGSVKLDDWKGAGKTMPWTSLGWAIGGLALIGVPVTAGFISKWLLLTAAMEKGMWPV 414 Query: 422 IVLLLLLLTLVLAGLVRMAARVLMAKPPQAV 452 VL+LL L + + R+ + ++P V Sbjct: 415 AVLMLLSSLLAVVYVWRVVETLYFSEPTAKV 445 >UniRef50_C0GJ41 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ41_9FIRM Length = 794 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 130/429 (30%), Positives = 190/429 (44%), Gaps = 61/429 (14%) Query: 12 LTPLLFSLLCFACR------KRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG---- 61 +TPLL LL FA R R + +T +L ++++ + A + Sbjct: 101 ITPLLVVLLPFAGALISGLIGRSNKDIRDCVATCTAFLTCVLAISMYPMVAAGEVSYALP 160 Query: 62 EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 E GL +D G +F + I FL YS YMRHE A YY F L Sbjct: 161 EFMGLGLLFRVDFFGFVFAVMASFIWFLATFYSGEYMRHEHAS--------TRYYVFLLL 212 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLF 181 L L V + + + ++ EA TL S LV ++ A Y+ + G+F Sbjct: 213 SLGGTLGVFLAGDFLSLFLFFEAMTLFSYVLVVHAQSEEAMAAGRNYLYM-------GIF 265 Query: 182 G---------TVLVYANAASVMPQAEMAIFWSEVLKQSSLLD-PTLMLLAFVFLLIGFGT 231 G V ++A ++ P E SL D T+ +A IGFG Sbjct: 266 GGLCLLVAIMMVTMHAGTTAIAPGLE------------SLADMGTMGYVAAALFFIGFGI 313 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFP------ 285 K G P+H WLP AH AP+P SALLS +++ +IR + ++ + P Sbjct: 314 KAGAAPLHIWLPQAHPVAPTPASALLSGIMIKTGAYGIIRVFTLLYTPAQGESPLWYTTE 373 Query: 286 --NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLV------AVELGIGGPLGI 337 L+ FGM+++ AA LVQR KR+LAYSSV MG + A LG G +G Sbjct: 374 QFGYALIWFGMVTMFTAAVLALVQRHAKRVLAYSSVSQMGYILMGIGAAAYLGFDGAIGF 433 Query: 338 FAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGM 397 HILNH+ K+ +F G + L+ + D + V G+ + P TA F A+AG+ Sbjct: 434 AGWAYHILNHAFFKSAMFLMVGAIYLRTHSLDYSKVGGLWRRFPVTAAAFLVAGAAIAGV 493 Query: 398 PPFNIFLSE 406 P FN ++S+ Sbjct: 494 PGFNGYVSK 502 >UniRef50_B8FRJ9 Proton-translocating NADH-quinone oxidoreductase, chain L n=11 Tax=Firmicutes RepID=B8FRJ9_DESHD Length = 651 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 138/470 (29%), Positives = 227/470 (48%), Gaps = 49/470 (10%) Query: 25 RKRRLSATRTV-TVLHSLGITLLLILALWVVQTAADAGE--IFAAGLWLHIDGL------ 75 R +RLS+T ++ +L S G+++ + L V+Q+ + E + WL I GL Sbjct: 32 RSKRLSSTISILAILTSFGLSI--AIGLGVIQSGSQIVENPVLTTVNWLSIGGLHIDFGT 89 Query: 76 -----GGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVV 130 + L ++ ++ + IYSIGYM HG+ YY F LF +ML +V Sbjct: 90 LIDPMSAMMLFVVTLVASMVQIYSIGYM-----HGDPG---FSRYYAFQSLFAASMLGMV 141 Query: 131 TSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVG---------VAFGL 180 + NL+ ++ E L S L+G + + S+ EAA K I VG + Sbjct: 142 LATNLLQLFIFWELVGLCSYLLIGFWFFKVSAREAAKKAFITTRVGDFGLLLGILFLYNT 201 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 FGT+ Y + +MA + + + T+M + + IG K+G FP+H Sbjct: 202 FGTLDFYGPGSL---SVQMATSFHDFALIGGVSYLTIMA---ILVFIGPVGKSGQFPLHV 255 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLI-RYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLPDA E P+PVSAL+ A + A + L+ R + + A S F +L+ G + Sbjct: 256 WLPDA-MEGPTPVSALIHAATMVVAGVYLVARMFFLFDNA--SPFALQLVAGMGAFTAIF 312 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 AA + Q DIKR+LAYS++ +G + LG+G + A++ H++ H+ K L+F G+G Sbjct: 313 AATIAIAQDDIKRILAYSTLSQLGYMMFALGVG---SLTASMFHLMTHAFFKALMFLGAG 369 Query: 360 NVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH 418 +V+ + +++ + G+ K MP T F G LA+AG+PPF F S+ + A H Sbjct: 370 SVIHALHHKQNIWDMGGLWKKMPITGTTFFIGVLAIAGIPPFAGFFSKDEILLAAY-HGH 428 Query: 419 LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVIL 468 +I + L L + R+ M + + + W+ T P++IL Sbjct: 429 PIIFAVGLFTAFLTAFYMSRLFFVAFMGEEKPENHPHESPWVMTLPLIIL 478 >UniRef50_A2BJA1 NADH-quinone oxidoreductase chain M n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJA1_HYPBU Length = 503 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 93/308 (30%), Positives = 153/308 (49%), Gaps = 16/308 (5%) Query: 92 IYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAF 151 +YS YM H EL + Y+ + LF ML V ++N I+ + +E T + S Sbjct: 107 VYSRPYMEHRFE--ELGGGSWGTYFLLYQLFTAGMLGAVLASNTILFYLFLELTLIPSGL 164 Query: 152 LVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSS 211 L+ +YG L A Y++ VG L G + A V ++ Sbjct: 165 LIALYGYGDRLRVALLYLVWTHVGTLLYLLGVFISGAYDIYVPDTGYTVAAFTG------ 218 Query: 212 LLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIR 271 LL +++G G K + +H WLP AH+EAP+PVSALLS + + L R Sbjct: 219 -------LLPLALIIVGLGVKMAMAGIHFWLPYAHAEAPTPVSALLSPLFIGVGGYALFR 271 Query: 272 YYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGI 331 + + QA + +L + + ++ F +LVQ+D+KRL AYSS+ MG + + L + Sbjct: 272 VGVGMFQADWATL-RPILFAWAVATMLYGGFLVLVQQDVKRLFAYSSISQMGYIMLGLSV 330 Query: 332 GGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGA 391 P A+LH ++H+L K +LF +G ++ GTR++ + G+L +MP+T + G Sbjct: 331 ANPEAEAGAILHYMSHALGKAILFGVAGVFIVALGTRNIREMGGLLGVMPYTGSIALTGF 390 Query: 392 LALAGMPP 399 + ++G+PP Sbjct: 391 MLISGLPP 398 >UniRef50_C6D5D4 Proton-translocating NADH-quinone oxidoreductase, chain L n=82 Tax=Bacillales RepID=C6D5D4_PAESJ Length = 625 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 127/411 (30%), Positives = 204/411 (49%), Gaps = 21/411 (5%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 I L L L I+ V+ FL +YS GYM+ + +T+ +YG+ LF F ML + Sbjct: 82 FEITNLNALMLVIVTVVSFLVNVYSAGYMKKD------ERITV--FYGYVALFTFAMLGL 133 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGT-VLVY 187 V S+N++V + E + S LVG Y + ++ AA K I+ +G A L G VL + Sbjct: 134 VLSDNMLVFYMFWELVGVCSFLLVGFWYAKPAARAAAKKAFIVTRIGDAGLLLGIIVLFW 193 Query: 188 ANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHS 247 + + + ++E QS + T+ + L +G K+G FP+H WLPDA Sbjct: 194 YMPGHALDFSSIHNVFTE--GQSGTITMTITTSIALLLFMGVIGKSGQFPLHVWLPDAM- 250 Query: 248 EAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQ 307 E P+P+SAL+ A + A + L+ I +A S + FG + AA L Q Sbjct: 251 EGPTPISALIHAATMVAAGVFLLARTFDIFEASASAM--HTVAYFGGFTAIFAATVALAQ 308 Query: 308 RDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGT 367 DIKR+LAYS++ +G + + +G+G G + H+ H+ K LLF +G+V+ T Sbjct: 309 NDIKRILAYSTISQLGYMVMAMGLGSMTG---GVFHLFTHAFFKALLFLAAGSVIHAVHT 365 Query: 368 RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLL 427 ++++ + G+ M TA F GAL+L+G+PPF+ F S+ + + L N L V L Sbjct: 366 QNIHEMGGLGSKMRITAWTFAIGALSLSGIPPFSGFWSKDAILASALDENPFLFAVGLAA 425 Query: 428 LLTLVLAGLVRMAARVLMAKP--PQAVNRGDLGWLTTSPMVILLVMMLAMG 476 L + R+ V M K Q + + T P+++L V+ + G Sbjct: 426 AFCTALY-MSRLFFIVFMGKSRLQQPAEVKESSKVMTIPLLVLAVISVGAG 475 >UniRef50_C5QQQ5 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=2 Tax=Staphylococcus RepID=C5QQQ5_STAEP Length = 816 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 119/370 (32%), Positives = 193/370 (52%), Gaps = 34/370 (9%) Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 F L++DGLG LF ++ IG L +YSIGY+ G ++Y + LF+ Sbjct: 83 FGMNFNLYVDGLGLLFSLLITGIGSLVVLYSIGYLSKSEQLG--------NFYCYLLLFM 134 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFG 182 ML VV S+NLI+++ E T+ SS L+ + ++ +S+ A K +I+ TV L G Sbjct: 135 GAMLGVVLSDNLIILYLFWELTSFSSFLLISFWREKKASIYGAQKSLIL-TVLGGLSLLG 193 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 +++ + AA M + K S + + +LA + ++IG TK+ P + WL Sbjct: 194 GIILLSLAADTFSIQTM------IEKASEIQNSPYFILAMILVMIGAFTKSAQVPFYIWL 247 Query: 243 PDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 PDA EAP+PVSA L SA ++ L ++ R I + G + L+ G++++ A+ Sbjct: 248 PDA-MEAPTPVSAYLHSATMVKAGLYLVARMTPIFAISEGWVWTITLV---GLITLFWAS 303 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGP-------------LGIFAALLHILNHS 348 Q+D+K +LA+S+V +G++ LGIG G AA+ H++NH+ Sbjct: 304 LNATKQQDLKGILAFSTVSQLGMIMSMLGIGAVSYHYQGADSQLYVAGFVAAIFHLINHA 363 Query: 349 LAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 K LF +G V GTR++ + G+L IMP + + AL++AG+PPFN FLS+ Sbjct: 364 TFKGALFMITGGVDHATGTRNVKKLGGLLTIMPISFTMTIITALSMAGVPPFNGFLSKEK 423 Query: 409 TITAGLARNH 418 + A + H Sbjct: 424 FLEAMIDVTH 433 >UniRef50_Q7NHD8 NADH dehydrogenase subunit 5 n=1 Tax=Gloeobacter violaceus RepID=Q7NHD8_GLOVI Length = 605 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 127/395 (32%), Positives = 196/395 (49%), Gaps = 26/395 (6%) Query: 86 IGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEAT 145 + L +YS+GYM HE L YYG F ML +V S+NL+ M+ E Sbjct: 98 VSLLVQLYSLGYMDHEP--------RLARYYGLLSFFTMAMLGLVLSDNLLAMYGFWELM 149 Query: 146 TLSSAFLVGIYGQRSSLEAAWKYIIICT-VGVAFGLFGTVLVYANAASVMPQAEMAIFWS 204 LSS LVG + + + AA K + T VG L G +L+Y NA ++ A W+ Sbjct: 150 GLSSYLLVGFWWSKPAAAAAAKKAFLTTRVGDFLLLIGILLLYVNAGTLEITALGE--WA 207 Query: 205 EVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLN 263 E ++ L ++LL F G K+ FP+H WLPDA E P+P SAL+ +A ++ Sbjct: 208 ETATIAAPLATLIVLLLFA----GPVGKSAQFPLHVWLPDAM-EGPTPASALIHAATMVA 262 Query: 264 CALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMG 323 + ++ R + S ++ G ++ +A Q DIKR+LAYS++ +G Sbjct: 263 AGVFMVARLEPVFAL---SSTALMVVAYTGAITALGSALMATAQNDIKRVLAYSTISQLG 319 Query: 324 LVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFT 383 + + LG+G AA+ H+ H+ K +LF G+G+V+ T+D+ + G++ MP T Sbjct: 320 YMFMALGVGNTE---AAMFHLFTHAFFKAMLFLGAGSVIHGAHTQDMREMGGLMGRMPVT 376 Query: 384 AVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL-IIVLLLLLLTLVLAGLVRMAAR 442 A +G G LALAG+ PF F S+ + A L + L + + LL L + R Sbjct: 377 AFTYGIGVLALAGVFPFAGFWSKDAILHA-LEKAELYPVFAMGLLTAGLTAFYMARQYIL 435 Query: 443 VLMAKPPQAVNRG-DLGWLTTSPMVILLVMMLAMG 476 V + KP + +R + W + P+VIL V A G Sbjct: 436 VFLGKPSEKSSRAHESTWTMSLPLVILAVPSAAAG 470 >UniRef50_Q649J3 NADH dehydrogenase/oxidoreductase n=4 Tax=Archaea RepID=Q649J3_9ARCH Length = 513 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 129/449 (28%), Positives = 215/449 (47%), Gaps = 54/449 (12%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 G+ ID L L ++ + F+ IYS + E H + +Y F L + + Sbjct: 73 GIEYVIDTLNAFVLVVVLFMSFMCVIYSKRSIEKEQPH------KIVLFYVVFQLLVTGL 126 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLV 186 + + ++ ++ +E + L++ L+ + G R+ L+A++ Y+I+ ++G F L G + Sbjct: 127 CGITVTGDIFNLYVFLEISALAAYALIALAGGRA-LKASYNYVIMGSLGACFVLLGIGFL 185 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDP----TLMLLAFVFLLIGFGTKTGLFPMHAWL 242 YA ++ + S LL P + AFVF +G K LFP+H W Sbjct: 186 YAVTGTL-----------NIADLSRLLPPLYGNRAVQAAFVFFAVGLSIKVALFPLHVWQ 234 Query: 243 PDAHSEAPSPVSALLSAVLLNCALLVLIRYYI------IICQAIGSDFPNRLLLIFGMLS 296 PDA++ APS VS +++ + ++ LIR I +G D + G+++ Sbjct: 235 PDAYTYAPSVVSVIIATAMAKVSVYALIRVIFSVFTVKFIDTYVGIDVALCWIAAMGIIA 294 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG-GPL---GIFAALLHILNHSLAKT 352 +V A ++Q ++KR+LAYSSV +G + LGIG P+ G+ A+ HILNH++ K Sbjct: 295 GSVLA---IMQTNLKRMLAYSSVAQIGYIV--LGIGLAPMSAWGLVGAVAHILNHAIMKG 349 Query: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LF +G + K G RD+ G+ K MP+ +V F A+++ G+PP F S+ I A Sbjct: 350 CLFMAAGAFIYKLGLRDIRDFEGLGKKMPYASVAFTIAAISMIGVPPCTGFASKLFLILA 409 Query: 413 GLARNHLL-----IIVLLLLLLTLV-LAGLVRMAARVLMAKP-------PQAVNRGDLGW 459 L L I V +LL TL+ LA R+ R+ K Q + D+ + Sbjct: 410 SLQATETLPVSGYIFVAVLLTSTLLNLAYFWRVIDRIYFVKSEEGHEGGGQETKKADVPF 469 Query: 460 LTTSPMVILLVMMLAMG----THIPQPVI 484 PM+IL + + +G T +P P I Sbjct: 470 SMVVPMLILAALCIVLGILWLTKVPLPFI 498 >UniRef50_B0VE74 pH adaptation potassium efflux system transmembrane protein n=22 Tax=cellular organisms RepID=B0VE74_ACIBY Length = 949 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 98/295 (33%), Positives = 163/295 (55%), Gaps = 11/295 (3%) Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLF 181 F+ ML + SNNLI++ E T++SS LVG + + + + + T + Sbjct: 120 FMAAMLGISLSNNLIILLVFWELTSISSFLLVGYWSHYEAAQRGSRMALTITGMGGLAML 179 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 G ++ ++ + ++++ L PTL+L+ L+G TK+ FP H W Sbjct: 180 GGFVLLGQITGTYEINDI-VGMKDLIQSHYLFVPTLLLI-----LLGAFTKSAQFPFHFW 233 Query: 242 LPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 LP+A + AP+PVSA L SA ++ + +L R I IG+ + ++ G+ ++ +A Sbjct: 234 LPNAMA-APTPVSAYLHSATMVKAGIFLLARLAPIF---IGAALYHNIVTFVGLFTLCMA 289 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 A F + + D+K LLAYS++ ++GL+ LGIG PL + AA+ HI+NH+ K LF +G Sbjct: 290 ACFAIFKEDLKGLLAYSTISHLGLIVCLLGIGSPLAVAAAIFHIINHATFKAALFMIAGI 349 Query: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLA 415 + + GTRDL + G+ +++PFTA L A ++AG+P N F+S+ M T LA Sbjct: 350 IDHETGTRDLRKLSGIWQLLPFTATLTMITAASMAGVPLTNGFISKEMFFTELLA 404 >UniRef50_A6LXP7 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=cellular organisms RepID=A6LXP7_CLOB8 Length = 617 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 121/423 (28%), Positives = 201/423 (47%), Gaps = 56/423 (13%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 ID L L I+ IG L IYS+GYM+ E ++ LF +ML +V Sbjct: 84 IDPLTATMLIIVTFIGLLVEIYSLGYMKGEKG--------FSRFFANLSLFTSSMLGLVI 135 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVG------------VAF 178 SNN M+ E L S L+G Y R S+++A K + VG +AF Sbjct: 136 SNNYFQMFFFWELVGLCSYLLIGFYYDRPSAVKANKKAFVANRVGDFGFLVGMLCLFMAF 195 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG--TKTGLF 236 G F + A+ +P + ++ L + LLI G K+ F Sbjct: 196 GTFN----FRELAASIPAYQDVVY-----------------LTIIALLIFAGPVAKSAQF 234 Query: 237 PMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLI--FG 293 P+H WLPDA E P+PVSAL+ +A ++ + +L R YI+ S L+I G Sbjct: 235 PLHVWLPDAM-EGPTPVSALIHAATMVAAGVYLLARGYILF-----SSLHEVSLVIAYIG 288 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 ++ +A +VQRD+KR+LA+S++ +G + + +G+GG + + H+ +H+ K L Sbjct: 289 GITAFMAGTIAIVQRDLKRILAFSTMSQLGYMVMAMGVGG---FTSGMFHLTSHAFFKAL 345 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 LF G+G+++ G +D+ + G++K M ++ F +L+LAG+PP + F S+ +T Sbjct: 346 LFLGAGSIIHSIGVQDIFKMGGLIKKMKLVSITFIIASLSLAGIPPLSGFFSKDEILTVT 405 Query: 414 LARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMML 473 ++ + L L+ L + R+ V + + + W T P++IL V + Sbjct: 406 YEHGYIFLYYLGLITAFLTAFYMARLVLIVFFGEEREKHSVHKTPWCMTVPLIILSVFSV 465 Query: 474 AMG 476 G Sbjct: 466 FYG 468 >UniRef50_A6DPK4 NADH-Ubiquinone/plastoquinone (Complex I), various chains domain protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPK4_9BACT Length = 498 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 123/470 (26%), Positives = 216/470 (45%), Gaps = 32/470 (6%) Query: 20 LCFACRKRRLSATRTVTVLHSL-----GITLLLILALWVVQTAADAGEIFAAGLWLHIDG 74 LC + + L RTV+++ +L LL + +Q + G G+ L D Sbjct: 16 LCCSLFTKNLKLQRTVSLIAALFHLAASFNLLQTVRAEGIQVYLNGGWAANIGIALVADL 75 Query: 75 LGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTS-- 132 + L I G+I + +YS M+ E+ +Y F LF F M+ V S Sbjct: 76 FSSIMLVITGLISLVVLVYSFKEMKEELQ---------ARFY--FPLFNFLMMGVNGSFI 124 Query: 133 -NNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAA 191 ++ ++ E LSS L+ + + LE A KY+ I L G ++YA Sbjct: 125 TGDMFNLYVWFEVMLLSSFILLAMGKKPDQLEGAIKYVTINLFSSILFLSGAAIIYAKTG 184 Query: 192 SVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPS 251 S + A++AI +E LL+ T +L L FG K+ LFPM WLP ++ P Sbjct: 185 S-LNMADIAIRIAES-SDEKLLNSTAILF-----LSSFGIKSALFPMFLWLPASYHTPPV 237 Query: 252 PVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIK 311 +S+L + +L + +IR + +I + + + +L++ V Q +++ Sbjct: 238 SISSLFAGLLTKVGIYAMIRTFTLIF-PLDNGLLQEFFYVIAILTMVVGVLCAASQFEVR 296 Query: 312 RLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLN 371 ++L+ V +G + + L + PLGI A+ ++L++ + KT LF SG +L K G+ DL Sbjct: 297 KILSVHIVSQIGYMILGLSLFTPLGIAGAIFYLLHNIIVKTNLFLLSGVILRKKGSCDLK 356 Query: 372 VVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTL 431 + G+ KI P A +F A ALAG+PP + F ++F+ + A + L++ L + + Sbjct: 357 KIGGLYKINPGFATIFALSAFALAGVPPLSGFWAKFVVLKAAADSHEYLLLGTGLAVGVV 416 Query: 432 VLAGLVRMAARVLMAKPP-----QAVNRGDLGWLTTSPMVILLVMMLAMG 476 L + ++ A K P + ++ G+ W P++ L +G Sbjct: 417 TLFSMTKIWAEAFWKKQPEEYPGEGIDTGNQPWQIMLPIIFLTCCTFGLG 466 >UniRef50_B1ZSE3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSE3_OPITP Length = 683 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 112/361 (31%), Positives = 171/361 (47%), Gaps = 40/361 (11%) Query: 68 LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 L + +D LG FL + + G IYSIG + G + + L Sbjct: 80 LTVRVDALGAFFLVVSSLAGLAISIYSIGAAKGLAGRGNVGVLAALFN-----ALLLATA 134 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLV 186 LV + +L + A E L++ LV + Q + A Y I+ + A + G +L+ Sbjct: 135 LVFMAGDLWLFLGAWELMALTAYGLVSFAHEQPETRRAGVLYFIMSHLDAACVVLGLLLL 194 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 + + S + AI + P AFV L+GFG K G+ P+H WLP AH Sbjct: 195 FQASGSTSFDSLHAI--------GGHMAPGKRDAAFVLFLLGFGIKAGIVPLHIWLPAAH 246 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDF----PN---RLLLIFGMLSVAV 299 APS VSA +S VL+ + LIR + DF P +L+ G +S + Sbjct: 247 PVAPSNVSAFMSGVLIKSGIYGLIR--------VSFDFLGTPPGWWGMTVLVIGTVSAVL 298 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHS 348 + L++ D+KRLLAY S+EN+G++ + +G L + A L H +NH+ Sbjct: 299 GVLYALMEHDLKRLLAYHSIENIGIILMGVGTSLLFLHSGHTALATLALIAGLYHTINHA 358 Query: 349 LAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 K LLF G+G VL T ++ + G+ K MP TA F GA+A++ +PP N F+SE++ Sbjct: 359 TFKGLLFLGAGAVLHATHTHNMEEMGGLAKRMPQTAFCFLIGAVAISALPPLNGFVSEWL 418 Query: 409 T 409 T Sbjct: 419 T 419 >UniRef50_A3DM91 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Staphylothermus marinus F1 RepID=A3DM91_STAMF Length = 532 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 110/380 (28%), Positives = 192/380 (50%), Gaps = 16/380 (4%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 G+ +D LG F ++G+I L I S Y+ H E YY + M Sbjct: 81 GIIYEVDVLGAFFGLLIGLIFPLINIVSYSYLERSSKHNEW-------YYTLYLGLQAGM 133 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVAFGLFGTVL 185 L + + +L ++ +E ++++ L + ++ L A KY + VG V Sbjct: 134 LGIAYTGDLFNLFVMLEVMSITAYGLTAYFREKGKPLNATIKYGLFGAVGSTIYFLAVVF 193 Query: 186 VYANAASV-MPQAEMAIFWSEVLKQSS--LLDPTLMLLAFVFLLI-GFGTKTGLFPMHAW 241 +Y+ ++ MP A A +++ L+P +L+ F L + F ++ +FP H W Sbjct: 194 LYSGIGTLAMPDAAAASMGLSYFGETTGLALNPFPVLILFAGLAVWAFMIESAVFPHHFW 253 Query: 242 LPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 LPDA+S PS V+A ++AV V+IR +I + LL+I G +++ V Sbjct: 254 LPDAYSNMPSSVAATMAAVAEGIGAYVIIRILYVIVGIDKVLWLLSLLVILGTVNIIVGG 313 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 + + V RD KR++AYS++ +MG V + +G+ +G+ +AL +IL H++ K LLF G V Sbjct: 314 YLMAVSRDAKRIIAYSTILDMGYVMIGIGLATNMGLQSALFYILAHTIVKPLLFIAVGEV 373 Query: 362 LLKYGTRDLNVVCGMLKIMPF--TAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 +Y T D++ + + + P+ +A+LFGG LA+ G+PP N+F ++ M A L Sbjct: 374 EAEYKTTDIDKLEEIGGVDPYIASALLFGG--LAVVGIPPLNMFFAKLMLFEAVLDSGIY 431 Query: 420 LIIVLLLLLLTLVLAGLVRM 439 +++++LL L G R+ Sbjct: 432 PLLIVILLGSALSFVGFSRL 451 >UniRef50_D2RZ77 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RZ77_9EURY Length = 681 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 132/434 (30%), Positives = 208/434 (47%), Gaps = 44/434 (10%) Query: 54 VQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 V T A EI A L ID L L L I+ ++ FL ++S+GYM E G L Sbjct: 77 VTTEVGAEEI-AFSFGLLIDPLSALMLIIVSLVAFLVHVFSLGYMNDEGETG------LP 129 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIIC 172 YY LF F+ML V ++NL++ + E L S L+G + + +S+ AA K ++ Sbjct: 130 RYYASLGLFTFSMLAFVYADNLLMAFMFFELVGLCSYLLIGFWFRTKSAPSAAKKAFLVT 189 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLML---------LAFV 223 G F L G V + + +V E + V ++++ D T + + + Sbjct: 190 RFGDYFFLIGVVAIASTFGTVAFAGEESFV---VAAETAIEDGTTLFGFDAQTWVTITGL 246 Query: 224 FLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIR----YYIIICQA 279 +L G K+ FP+H WLPDA E P+ VSAL+ A + A + L+ YY + A Sbjct: 247 LVLGGVIGKSAQFPLHTWLPDA-MEGPTTVSALIHAATMVAAGVYLVARMFGYYALSPTA 305 Query: 280 IGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFA 339 + ++ G + AA +V+ DIK++LAYS++ G + + +G+GG + A Sbjct: 306 LA------IIAFVGGFTALFAATMGVVKDDIKQVLAYSTISQYGYMMLGMGVGGYV---A 356 Query: 340 ALLHILNHSLAKTLLFCGSGNVL-LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMP 398 + H++NH+ K LLF GSG V+ L + +D+ + G+ P T F GALALAG+ Sbjct: 357 GVFHLMNHAFFKALLFLGSGAVIVLMHHEQDMWKMGGLKDKAPVTYYTFLAGALALAGIV 416 Query: 399 PFNIFLSE----FMTITAGLARNHLLIIVLLLLLLTLVLAGLV--RMAARVLMAKP--PQ 450 PF+ F S+ F + GL +++ + LL + G RM +P Sbjct: 417 PFSGFWSKDEVLFDALIVGL-EEPVILAAYAMGLLGVFFTGFYTFRMVFLTFHGEPRSET 475 Query: 451 AVNRGDLGWLTTSP 464 A N +GW +P Sbjct: 476 AENPHGVGWSIKAP 489 >UniRef50_Q21TB8 NADH dehydrogenase (Quinone) n=2 Tax=Proteobacteria RepID=Q21TB8_RHOFD Length = 671 Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 110/357 (30%), Positives = 174/357 (48%), Gaps = 27/357 (7%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 +D LG FL+ + L +Y++GY+R SP + ++G ++ + +LV Sbjct: 71 FRLDALGAFFLSWSLPMTLLGSVYAMGYLRKYFD----SPRHIGVHFGLLNMISLSFILV 126 Query: 130 VTSNNLIVMWAAIEATTLSSAFLV-GIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 + + E LS+ LV Y + A + Y++ VG+ F + +++Y Sbjct: 127 YVGEHAVTFLLGWEIAALSAWLLVIWDYPNQKVRFAGFNYLVSTHVGLIFLVAAVMILYT 186 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 N S F + S T+ F+ L+ FG K+ FP H+WLP AH+ Sbjct: 187 NTQS--------WFLDDYGDWMSQNPGTVRNTVFLLLVTSFGLKSAFFPFHSWLPRAHAA 238 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQR 308 AP+ VSAL+S V+ L L+ + +I + ++ L+ F + S V + + QR Sbjct: 239 APAHVSALMSGVIHKAGLYALVHFLMISGKP--DEWMGWFLIAFSVTSAVVGGLYTVGQR 296 Query: 309 DIKRLLAYSSVENMGLVAVELGIGG-----------PLGIFAALLHILNHSLAKTLLFCG 357 D+KRLL YSS EN+G+ + G+G LG LLH+LNH+ K LF Sbjct: 297 DLKRLLGYSSTENVGIAGIGFGVGCLGLSWDMPTLVALGFGGGLLHVLNHAFFKCQLFYA 356 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 +G V D+ + G+ K+MP TAV F G +A++ +PPFN F SEF+ I +GL Sbjct: 357 AGCVYQIKHVIDIERLGGLFKLMPVTAVCFIIGGVAISALPPFNGFASEFL-IYSGL 412 >UniRef50_B4SLF9 NADH dehydrogenase (Quinone) n=20 Tax=cellular organisms RepID=B4SLF9_STRM5 Length = 943 Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 134/454 (29%), Positives = 224/454 (49%), Gaps = 34/454 (7%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMR-HEVAHGELSPVTLCDYYGFFHLFLFTMLL 128 L +DGL +F ++ IG L +Y+ Y+ + AH +Y + LF+ ML Sbjct: 74 LRLDGLAWMFAGLVLGIGALVVLYARYYLSSQDNAH---------RFYTYLLLFMGAMLG 124 Query: 129 VVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 +V S NL+++ E T++SS L+G + R + ++ T G L G VL+ Sbjct: 125 MVVSGNLLLLMIFWEMTSISSFLLIGFWSHRQDAREGARMALVITGGGGLALLGGVLLIG 184 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 ++ + E ++ S+L L L+ L G TK+ FP H WLP A + Sbjct: 185 RIVGSF-DLDVVLAAGEQIRASALYPYALFLV-----LAGIFTKSAQFPFHFWLPHAMA- 237 Query: 249 APSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQ 307 AP+PVSA L SA ++ + +L R + + GSD + G L++ + A+ + Q Sbjct: 238 APTPVSAYLHSATMVKAGVFLLARLHPALA---GSDLFFYTVSGIGALTLLIGAWNAIFQ 294 Query: 308 RDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGT 367 D+K LLAYS++ ++GL+ + G+ P+ + A + HILNH+ K LF +G + + GT Sbjct: 295 HDLKGLLAYSTISHLGLITLLFGLSTPMAVVAGVFHILNHATFKASLFMAAGIIDHETGT 354 Query: 368 RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM----TITAGLARNHLLIIV 423 RD+ + G+ ++MPFT+ L +LA+AG+P N FLS+ M +TAG + V Sbjct: 355 RDMRKLGGLRRLMPFTSALAIIASLAMAGIPLLNGFLSKEMLFAEALTAGGGPGAMRTAV 414 Query: 424 LLLLLLTLV--LAGLVRMAARVLMAKPPQAVNR---GDLGWLTTSPMVILLVMMLAMGTH 478 + LL V +A +R P ++R W+ P+ +L+V+ +A+G Sbjct: 415 SIAALLAGVFGVAYSLRFVHDTFFGPGPHDLDRVPHEPPRWMKV-PVELLVVICVAVGIA 473 Query: 479 IPQPVIRILAGASTIVLSGTHDLPAQR-STWHDF 511 V +L A+ +L + +P + WH F Sbjct: 474 PALTVAPVLHAAAASILG--NAMPEYSLAVWHGF 505 >UniRef50_UPI00005100B6 putative monovalent cation/H+ antiporter subunit A n=1 Tax=Brevibacterium linens BL2 RepID=UPI00005100B6 Length = 1024 Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 106/350 (30%), Positives = 181/350 (51%), Gaps = 22/350 (6%) Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 F L L DG+G +F I +IG + +YS GY+ +Y +F Sbjct: 64 FGVDLALRADGIGVIFTYIALIIGAVVFVYSTGYLDRGRN---------TSFYWLMVIFT 114 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGT 183 F+M+++V SN+L+V++ E T+L+S FL+ G A I G++ + Sbjct: 115 FSMVMLVLSNDLLVLFVCWELTSLASFFLIARSGSPGQAPALRTMFITFIGGLSLLVATG 174 Query: 184 VLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLP 243 V++ + + +A + WS QS P L+A V + + TK+ FP H+WLP Sbjct: 175 VIIAVTGTTNVHEALSSPVWS---AQS----PVTSLVA-VLIAVAAMTKSAQFPFHSWLP 226 Query: 244 DAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAF 302 DA + A +PVSA L +A ++ + +L+R+ + N LL++ G+++ + + Sbjct: 227 DAMAAA-TPVSAYLHAAAVVKAGIFLLLRFTPAFH---ATPAWNTLLIVAGLITACIGGW 282 Query: 303 FILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVL 362 F L Q D+K+L+AYS+V +GL+ +GIG I AA LH++ H+L K+ LF G V Sbjct: 283 FALNQYDVKKLMAYSTVSQLGLITAVIGIGSEAAIAAATLHVIAHALFKSGLFMMVGVVD 342 Query: 363 LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 GTR+L + +++ P + ++ G +++G+PP F+S+ TA Sbjct: 343 HLAGTRELTRIPQLMRAAPASFIVMIVGCASMSGIPPLLGFVSKEALFTA 392 >UniRef50_C5A3D6 Formate hydrogenlyase I subunit D (Mhy1D) n=2 Tax=Thermococcus RepID=C5A3D6_THEGJ Length = 664 Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 115/387 (29%), Positives = 196/387 (50%), Gaps = 32/387 (8%) Query: 53 VVQTAADAGEIFAA-GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMR--HEVAHGELSP 109 V + E+F+ G+ +++ GL +FL I+G++G +++I YM + G + Sbjct: 44 VYHVYTNGPEMFSLFGIPMNVSGLSNVFLLIIGIVGVAASLFAINYMDLFEKTGKGWVYA 103 Query: 110 VTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYI 169 + ++ FL +M LVVT +++ + E TLSS LV + + A+ KY Sbjct: 104 IA-------YNTFLASMTLVVTVDSMEYFVMSWELMTLSSFILVFFSEKARDVNASVKYY 156 Query: 170 IICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGF 229 I LF L A S++ E F E + + T L+ L+I F Sbjct: 157 ITMHFLDTIPLF---LALGTAYSLIGNFEELTF--ENIGAALSTHHTSRLVFAGLLMIAF 211 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K GLFP W+ + + APS VSA+++ + AL ++ ++ + G + ++ Sbjct: 212 TAKAGLFPFSFWVAETYRAAPSHVSAIMAGAMEKMALYGILA---LVWKTAGIEGDAGII 268 Query: 290 L-IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG-------------GPL 335 + + GM+++ A + L + + KRLLAYSS+ MG + + +GIG G L Sbjct: 269 VALAGMITITYATLYALRENNAKRLLAYSSISQMGYIWLGIGIGMVLVPKGGFLGTIGAL 328 Query: 336 GIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALA 395 G FA L H LNH++ K LF +G V + GT DLN + G+ + M FTA+ +LA++ Sbjct: 329 GAFAGLFHALNHAIFKASLFLSAGAVEYRTGTVDLNELGGLGRRMKFTALAALFASLAIS 388 Query: 396 GMPPFNIFLSEFMTITAGLARNHLLII 422 G+PPFN F+S+++ +G + ++ L+I Sbjct: 389 GVPPFNGFISKWLIYVSGYSSSNPLLI 415 >UniRef50_D2RET4 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RET4_ARCPR Length = 460 Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 109/392 (27%), Positives = 196/392 (50%), Gaps = 29/392 (7%) Query: 68 LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 +L DG+ +F + +I + +YS YM+H L Y+ ++L+ ++ML Sbjct: 57 FYLFSDGISNIFGFTIALISSMVALYSYPYMKHRFEEMGLGEGEFRKYWFLYNLYAYSML 116 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVY 187 L+V S NL++++ +E + +SS L+ YG + A Y + V L G ++V Sbjct: 117 LLVYSANLLLLYVFLEISLVSSFLLIYYYGYGNRRWVALLYFVWTHVAGVLTLIGFIIV- 175 Query: 188 ANAASVMPQAEMAIFWSEVLKQSSLLDPTLM---LLAFVFLLIGFGTKTGLFPMHAWLPD 244 LK +LL P + ++A++ + +G K H WLP Sbjct: 176 ------------------GLKNQTLLMPYIKVIPMVAWILIFLGMVIKLPGLGFHIWLPY 217 Query: 245 AHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFI 304 AH+EAP+PVSALLS + + A +L+R Y I + F +++ L +G L+ VA + Sbjct: 218 AHAEAPTPVSALLSPLTVGLAGYILLRIYEIDPSFV-IKFRDQIFL-YGFLTSFVAGLIV 275 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK 364 QRD KRLLAYS+V MG + + L + G G+F ++ ++H+ K++LF +G +++ Sbjct: 276 FKQRDFKRLLAYSTVSQMGYMLMALCL-GTYGMFGLVIQYVSHAFGKSILFMSAGALIMA 334 Query: 365 YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVL 424 Y RD+ + G+ + +P A G + L+G+ + L EF I G+ + + V Sbjct: 335 YHLRDIEKMGGLHEQVPEIANASLLGFMNLSGIVTIGL-LGEFF-ILRGVVEFYGIGRVA 392 Query: 425 LLLLLTLVLAGLVRMA--ARVLMAKPPQAVNR 454 +++++ +++GL R+ KP ++ Sbjct: 393 MMVIVAFIISGLYSFYTMKRIYYGKPKDYPSK 424 >UniRef50_Q52978 Probable K(+)/H(+) antiporter subunit A/B n=110 Tax=Bacteria RepID=PHAAB_RHIME Length = 999 Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 133/454 (29%), Positives = 222/454 (48%), Gaps = 35/454 (7%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L +DG LF A++ IG L +Y+ YM E PV ++ F F+ +ML V Sbjct: 101 LRMDGFAWLFSALITAIGVLVALYARYYMAEE------DPVP--RFFALFLAFMGSMLGV 152 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLF-GTVLVYA 188 V S NLI++ E T++ S L+G + + + + T +F G +++ Sbjct: 153 VLSGNLILLAVFWELTSIVSFLLIGYWHHNAHARDGARMALTITGTGGLAMFVGLIIIGK 212 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 S A +A ++ + L V +L+G TK+ FP H WLP A + Sbjct: 213 IVGSYELDAVLA-------SGDAIRNHPLYGTVLVLVLLGALTKSAQFPFHFWLPHAMA- 264 Query: 249 APSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQ 307 AP+PVSA L SA ++ + +L+R++ ++ G++ ++ + G+ ++ + A+F + Q Sbjct: 265 APTPVSAYLHSATMVKAGVFLLVRFWPVMA---GTEAWFWIVGLAGLTTLLLGAYFAIFQ 321 Query: 308 RDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGT 367 +D+K LLAYS++ ++GL+ V L +G PL AA+ HI+NH+ K LF +G + + GT Sbjct: 322 QDLKGLLAYSTISHLGLITVLLSLGSPLAAVAAVFHIVNHATFKASLFMAAGIIDHESGT 381 Query: 368 RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLL 427 RD+ + G+ MP TA L + A+AG+P N FLS+ M + HL+ + + Sbjct: 382 RDIRRLGGLFHFMPITATLAMVASAAMAGVPLLNGFLSKEMFFAEAI-ETHLVNPLDTVT 440 Query: 428 LLTLVLAGL------VRMAARVLMAKPPQAVNRGDLG---WLTTSPMVILLVMMLAMGTH 478 +AG+ +R V +PP + R W+ +P+ L++ L +G Sbjct: 441 PYVATIAGMFAVTYSLRFIHGVFFGRPPADLPRKPHEPPRWM-RAPLDFLVLACLVVGII 499 Query: 479 IPQPVIRILAGASTIVL-SGTHDLPAQRSTWHDF 511 Q + L A VL GT D S WH + Sbjct: 500 PAQTIGPFLHTAVLSVLREGTPDY--SLSVWHGW 531 >UniRef50_B5EN60 Proton-translocating NADH-quinone oxidoreductase, chain L n=25 Tax=Proteobacteria RepID=B5EN60_ACIF5 Length = 660 Score = 134 bits (337), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 110/352 (31%), Positives = 182/352 (51%), Gaps = 31/352 (8%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 ID L L L ++ + +Y++GYM HG+ ++ + LF F+M+++V Sbjct: 90 IDSLTALMLVVVTFVSLSVHLYTVGYM-----HGDPG---YARFFSYIALFTFSMIMLVM 141 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVGVAFGLFGTVLVYANA 190 SNN + ++ EA L S L+G + QR S AA K I+ VG L G VY Sbjct: 142 SNNFLQLFFGWEAVGLVSYLLIGFWFQRESANVAAIKAFIVNRVGDFGFLIGIAAVYHYC 201 Query: 191 ASVMPQAEMAIFWSEVLKQSSLLDP----TLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 S+ + A ++ Q+ + P +++ + L +G K+ P+H WLP++ Sbjct: 202 GSLDYRTVFAAV-PHLIGQTLEIIPGHPWSVLTWIALLLFVGAMGKSAQVPLHVWLPES- 259 Query: 247 SEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFI- 304 E P+P+SAL+ +A ++ + ++ R I Q S ++LI G AV AFF+ Sbjct: 260 MEGPTPISALIHAATMVTAGIFMVARMSPIFEQ---SATALSVVLIIG----AVTAFFMG 312 Query: 305 ---LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 LVQ DIKR++AYS++ +G + LG AA+ H++ H+ K LLF +G+V Sbjct: 313 LVGLVQNDIKRIIAYSTISQLGYMTAALGAS---AFSAAIFHLMTHAFFKALLFLAAGSV 369 Query: 362 LLKYGT-RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 + +D+ + G+ K+MP T + F G+L+L+G+PPF F S+ + I A Sbjct: 370 IHAMSNEQDIRKMGGLRKVMPITYITFLIGSLSLSGIPPFAGFFSKDLIIEA 421 >UniRef50_B6J444 Sodium/proton antiporter protein n=5 Tax=Coxiella burnetii RepID=B6J444_COXB2 Length = 768 Score = 134 bits (337), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 118/373 (31%), Positives = 192/373 (51%), Gaps = 44/373 (11%) Query: 45 LLLILALWVVQTAADAGEIFAAGLWL---------HIDGLGGLFLAILGVIGFLTGIYSI 95 LL I + ++ T G I++ W ++DGL LF ++ IG IYS Sbjct: 38 LLFIYFIHLIPTIMHGGTIYSGFRWFPDLNINFSFYVDGLSLLFGLLITGIGIPIVIYSA 97 Query: 96 GYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGI 155 Y+ + H L YYG+ LF+ +ML +V +NNLIV++ E T++SS L+G+ Sbjct: 98 PYLENH-PH-------LTRYYGYLFLFMASMLGLVLANNLIVLFVFWELTSISSFLLIGL 149 Query: 156 YGQR-SSLEAAWKYIIICTVG-----VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQ 209 +R ++ +AA + + + +G +F L G V + A ++ Q + L+ Sbjct: 150 EHERPAARKAAVQALFVTVIGGLSLLASFILIGIVTHTYSVAQLLSQGNL-------LQN 202 Query: 210 SSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLV 268 L P L+L+ LIG TK+ FP H WLP+A EAP+PVSA L SA ++ + + Sbjct: 203 QPLFVPILLLM-----LIGAFTKSAQFPFHFWLPNA-MEAPTPVSAYLHSATMVQVGIYL 256 Query: 269 LIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVE 328 L R++ ++ + + +L G +++ + Q D+K +LAY+++ +G + Sbjct: 257 LARFHPLMSH---NYWWFVILTTIGGITMLAGVLLAVRQTDMKLILAYTTITALGSLVFL 313 Query: 329 LGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMP--FTAVL 386 LG L I AA+ +L H+L K LF G++ + GTRD+ V G+ K MP F AVL Sbjct: 314 LGSTHDLIIKAAVAFLLAHALYKATLFMAVGDIKHQTGTRDIGKVRGLHKAMPITFMAVL 373 Query: 387 FGGGALALAGMPP 399 G ++AG+PP Sbjct: 374 VAGA--SMAGLPP 384 >UniRef50_A9FF71 Hydrogenase-4 component F n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FF71_SORC5 Length = 478 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 110/356 (30%), Positives = 192/356 (53%), Gaps = 4/356 (1%) Query: 133 NNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAAS 192 N+L+++W A+EATTL++A L+ G +S A+W+Y++ +VG+ L G + + S Sbjct: 118 NHLVLLWIALEATTLAAAPLIVRPGIPASHRASWRYLLFSSVGLGVLLVGFICLGRGLES 177 Query: 193 VMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSP 252 QA F +L ++ L L+G GTK GL PM++WLP+A+ EAP Sbjct: 178 -GGQAP-TFFLDRLLAPPAIPVNAWTKLGAALALLGLGTKLGLAPMYSWLPEAYDEAPPA 235 Query: 253 VSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKR 312 V+ALL A+ NC L+ L R ++ S LL + G++SV V+ I+ R++KR Sbjct: 236 VAALLGAIQFNCVLVALFRVVQVLRPTHASLLAGELLTM-GIVSVVVSTVGIIATRNLKR 294 Query: 313 LLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNV 372 L+AY+S+ + G++A+ LG+G + LL++L+++ K +LF +G + Y T+D Sbjct: 295 LIAYASINHAGVIAIGLGVGKSAS-YGLLLYVLSNAFIKAILFLTAGTIKAHYHTKDTRE 353 Query: 373 VCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLV 432 + G+++ +P++ G AL G PPF FL E + ++A + +L+ +L+T+ Sbjct: 354 ISGLIEDLPYSGGFLMVGTFALLGFPPFGSFLGELLILSALVGSGQMLVFAAFCVLITMT 413 Query: 433 LAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILA 488 R ++ +P + + P + LV ++ +G +IP PV +LA Sbjct: 414 FVATGRAVFPMIWGEPTRRRSWPRQTLPVALPKLGFLVALVVLGVYIPPPVSSLLA 469 >UniRef50_Q6GBK7 Putative antiporter subunit mnhA2 n=63 Tax=Staphylococcus RepID=MNHA2_STAAS Length = 800 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 139/492 (28%), Positives = 232/492 (47%), Gaps = 81/492 (16%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 L L +DGL +F I+ +IG Y+ Y+ + L +Y + LF+F+M Sbjct: 71 NLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDN-------LPRFYFYLTLFMFSM 123 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVL 185 + +V S+N I+M+ E T++SS L+ Y S A + +I G L G ++ Sbjct: 124 IGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAMQSFMITVFGGLALLVGFIM 183 Query: 186 VY-----ANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 +Y N ++ QA+ +K L P + F+FLL F TK+ FP H Sbjct: 184 LYIMTGTNNITEILGQADH-------IKNHGLFIPMI----FMFLLGAF-TKSAQFPFHI 231 Query: 241 WLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIG-SDFPNRLLLIFGMLSVA 298 WLP A + AP+PVSA L SA ++ + +L+R+ +G S+ ++ G++++ Sbjct: 232 WLPRAMA-APTPVSAYLHSATMVKAGIFLLLRF----TPLLGLSNMYVYIVTFVGLITML 286 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLG--------------IFAALLHI 344 + L Q D+K +LAYS++ +G++ +GIGG +F AL H+ Sbjct: 287 FGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHQQDAIASIYVFVLFGALFHL 346 Query: 345 LNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 +NH++ K LF G G + + G+RD+ ++ GM ++ P ++ AL++AG+P N FL Sbjct: 347 MNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFL 406 Query: 405 SEFMTITAGLARNHLLIIVLLLLLLTLVLAGLV----------RMAARVLMAKPPQAV-N 453 S+ M + A L + L L+ ++ +V G++ M V K V Sbjct: 407 SKEMFLDA-LTQTGQLSQFSLISMIAIVFVGVIASVFTFTYALYMVKEVFWTKYDSKVFT 465 Query: 454 RGDLG--WLTTSPMVILLVMMLAMGTHIPQPVIRILA---GASTIVLS------GTH--- 499 + ++ WL + P +IL+V++ PVI + G IVL+ G H Sbjct: 466 KKNIHEPWLFSLPSLILMVLV---------PVIFFVPNIFGKGIIVLALRAVSGGNHQID 516 Query: 500 DLPAQRSTWHDF 511 L S WH F Sbjct: 517 QLAPHVSQWHGF 528 >UniRef50_B2KDU2 NADH dehydrogenase (Quinone) n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDU2_ELUMP Length = 476 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 131/499 (26%), Positives = 220/499 (44%), Gaps = 49/499 (9%) Query: 7 FALLLLTPLLFSLL-CFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 F+ +L PL +++ F RK RL AT S+G+ +L LA + A E+F+ Sbjct: 4 FSNFILLPLAAAIIVSFFNRKPRL-ATGLTLFTFSIGLVYVL-LAFLKNKAGAATMEVFS 61 Query: 66 AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFT 125 I LG ++L L V F Y G + L G Sbjct: 62 GEDIFTIMMLGLIYLVGLCVCWF------AAYAEKTERKGTYYALILTATAG-------- 107 Query: 126 MLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVL 185 M + + + ++ +E + + L+ Y + E A KY + ++ +F + Sbjct: 108 MCGITAARDFFTVYVFLEVIAVCAFTLIAFYNREKGTEGALKYFYLSSLASTAIMFAIAI 167 Query: 186 V--YANAASVMPQAEMAIFWSEVLKQ---SSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 + YA S E LK S+ +P ++ + + GF KTGL P H Sbjct: 168 LFLYAGGTSF-----------EHLKSVMASNQANPVVINVFLGIMACGFMVKTGLVPFHT 216 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCA---LLVLIRYYIIICQAIGSDFP-NRLLLIFGMLS 296 W PDA+ A +PVSALL+ ++ A L+ I + I + + P + +++FG +S Sbjct: 217 WTPDAYESASTPVSALLAGIITKAAGAYTLIKIAMMLGITNHLTAHNPVGKAIMVFGAVS 276 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + + L Q KR+LAYSS+ MG + + G+ PLG+ A+ H+ NH+ KT LF Sbjct: 277 IVAGSVMALYQTSFKRMLAYSSISQMGYIFLAAGLSTPLGLAGAIFHLFNHATFKTALFF 336 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 +G + GT ++ + G+ K MP+T+++ L+ AG+PP + F S+F+ I A Sbjct: 337 NAGALESAAGTSNIKELSGLEKQMPYTSMMSLISMLSTAGIPPLSGFWSKFIIILALWQS 396 Query: 417 NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP---QAVNRGDLGWLTTSPMVILLVMML 473 L + L + LA +R + + + V G L P I + +M+ Sbjct: 397 GFYLFAFIALFASVITLAYFLRAQRNIFFGRAEGKMKEVKEVRAGMLI--PAGIFVFIMI 454 Query: 474 AMGTHIP-------QPVIR 485 A+G + P +P I+ Sbjct: 455 AVGLYFPLMYTSFIEPFIK 473 >UniRef50_B1L375 NADH:ubiquinone oxidoreductase subunit 4 (Chain M) n=2 Tax=Archaea RepID=B1L375_KORCO Length = 507 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 106/328 (32%), Positives = 159/328 (48%), Gaps = 21/328 (6%) Query: 83 LGVIGFLTGIYSIGYMRHEVAHGELS---PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMW 139 +G++ + IYS+ YM H E P + Y+ + +F M+ V S NL+ + Sbjct: 88 IGIVTSMISIYSLRYMEHRFEEMEKEGQRPASWGIYFMLYVMFSAAMMGTVLSTNLVEFY 147 Query: 140 AAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAAS------V 193 +E + L S L+ YG A Y+I VG L G +L+ NA + + Sbjct: 148 LFLEVSLLPSFLLIAFYGYGRRERIALLYLIWTHVGALAFLIGALLLGLNARTFDFFNPI 207 Query: 194 MPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPV 253 A M + LL + + F+ +LIG K +F +H WLP AH+EAP+PV Sbjct: 208 KGVANMGL--------GELLPEAMRMPVFIAILIGLFVKMAVFGVHIWLPYAHAEAPTPV 259 Query: 254 SALLSAVLLNCALLVLIRY-YIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKR 312 SALLS L+ A LIR Y++ S P LL +L++ L Q D KR Sbjct: 260 SALLSPNLIGIAGYALIRIAYVLFPSDFASISPY--LLGLALLTIIYGGLMALAQDDFKR 317 Query: 313 LLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK-YGTRDLN 371 LAYSSV MG + + + LG+ ALLH H++ K LLF +G ++ + +G R ++ Sbjct: 318 FLAYSSVSQMGYLLMGVASVTSLGMAGALLHYAAHAVGKALLFATAGVLITQLHGLRSIS 377 Query: 372 VVCGMLKIMPFTAVLFGGGALALAGMPP 399 + G+ MP TA L G + + G+PP Sbjct: 378 KMGGLATKMPMTAALALIGFMHITGVPP 405 >UniRef50_B8J1C9 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Bacteria RepID=B8J1C9_DESDA Length = 642 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 111/348 (31%), Positives = 173/348 (49%), Gaps = 36/348 (10%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 +D L + L ++ + L IYS+GYM+ E + ++ + LF F+ML++V Sbjct: 79 VDQLTAVMLIVVTSVSTLVHIYSVGYMKGEDGYYR--------FFAYLALFSFSMLMLVL 130 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFG----------LF 181 SNN + ++ EA LSS L+G Y +++S A K I FG LF Sbjct: 131 SNNFLQLFFGWEAVGLSSYLLIGFYYEKTSASDAGKKAFIVNRFGDFGFLLGLFCIFTLF 190 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 G+ L Y N V +A + S + S+ TL+ L L G K+ P+H W Sbjct: 191 GS-LHYDN---VFARAGLLQGLSYTIGGISIDAATLVCL---LLFCGAAGKSAQLPLHVW 243 Query: 242 LPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRL--LLIFGMLSVAV 299 LPDA E P+PVSAL+ A + A + L+ C A+ S P L + + G L+ Sbjct: 244 LPDA-MEGPTPVSALIHAATMVTAGVFLVAR----CNALFSLSPTALGVITVVGALTALF 298 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 AA L Q DIKR++AYS++ + + + G+G A + H+ H+ K LLF G G Sbjct: 299 AATIALTQTDIKRVVAYSTISQLAFMFIGCGVGAYA---AGIFHLFTHAFFKALLFLGCG 355 Query: 360 NVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 +V+L + +D+ + G+ K MP T V F +L+++G+P F S+ Sbjct: 356 SVILGMHHEQDMRRMGGLRKYMPVTCVTFLLASLSISGVPGLAGFFSK 403 >UniRef50_Q04YB3 NADH dehydrogenase (Ubiquinone), L chain n=7 Tax=Bacteria RepID=Q04YB3_LEPBL Length = 648 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 109/327 (33%), Positives = 168/327 (51%), Gaps = 30/327 (9%) Query: 86 IGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEAT 145 IG L +YSIGYM+ + Y+ + +LF+F ML +V + NLI+++ E Sbjct: 98 IGSLIHLYSIGYMKDDPG--------FARYFAYLNLFIFAMLNLVLAENLILLFLGWEGV 149 Query: 146 TLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASV-MPQAEMAIFW 203 L S L+G Y + S+ A K I+ +G L G LV+ SV E AI Sbjct: 150 GLCSYLLIGFDYHKESAANAGMKAFIVNRIGDLGMLLGIALVFWYTGSVSFTTIEGAIL- 208 Query: 204 SEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALL-SAVLL 262 E+ +L T V IG K+ P+H WLPDA + P+PVSAL+ +A ++ Sbjct: 209 -EIPSFRYILPVTA-----VCFFIGAIGKSAQLPLHVWLPDAMA-GPTPVSALIHAATMV 261 Query: 263 NCALLVLIRYYIIICQAIGSDFPN--RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVE 320 + ++ R I A P +++ G ++ AA L Q DIK++LAYS+V Sbjct: 262 TAGVFLIARLNPIFLSA-----PQVGHWIVVIGSMTAFFAATIGLFQNDIKKVLAYSTVS 316 Query: 321 NMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKI 379 +G + V +G G + A L H++ H+ K LLF GSG+V+ + +DL + G+ K Sbjct: 317 QLGYMFVAMGAGAYV---AGLFHLMTHAFFKALLFLGSGSVIYALHHEQDLRNMGGLKKR 373 Query: 380 MPFTAVLFGGGALALAGMPPFNIFLSE 406 M T + F G+LA++G+PPF+ F S+ Sbjct: 374 MKITWITFLVGSLAISGIPPFSGFFSK 400 >UniRef50_B8D3Q4 Hydrogenase 4, component F or formate hydrogen lyase n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D3Q4_DESK1 Length = 530 Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 108/341 (31%), Positives = 178/341 (52%), Gaps = 27/341 (7%) Query: 134 NLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFGLFGTVLVYANAAS 192 NL VM +E ++S+ LV + R+ ++EAA KY +I V V++Y S Sbjct: 140 NLFVM---LEVLSVSAYGLVAYHKNRAEAVEAAAKYALIGAVATNLYFAALVIIYVTHGS 196 Query: 193 VMPQAEMAIFWSEVLKQSSLLDPTLM---LLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 + M + S + +Q S + L+A F L F K+ LFP H WLPDAH EA Sbjct: 197 L----NMGLL-SLIARQYSGAGEAVKYAGLIAVAFSLWVFTYKSALFPSHFWLPDAHPEA 251 Query: 250 PSPVSALLSAVLLNCALLVLIR--YYIIICQAIGSDFPNRL---LLIFGMLSVAVAAFFI 304 P+PVSA LS VL+N + ++R Y I + ++F + L I G LS + A + Sbjct: 252 PTPVSATLSGVLVNVGVYAVMRFLYTIFGSDSYLAEFRAIVLATLFILGSLSGLIGALMM 311 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGI--------FAALLHILNHSLAKTLLFC 356 ++Q+D+KRLLAYS++ ++G++ + L IG G+ A+ H+++H +AKT+LF Sbjct: 312 MMQKDVKRLLAYSTISHIGIIYIGLSIGFLSGVGEAVKIAMAGAIAHMISHGIAKTMLFM 371 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 SG + G+RDL+ + G+ + P + + G L+LAG+ PF F S+ + Sbjct: 372 ASGVFIDAAGSRDLDELRGIGRNYPIASFAWLTGFLSLAGLLPFLGFYSKLLIYYGYTYS 431 Query: 417 NHLLIIVLLLLLLTLVLAGLVRMAARVL--MAKPPQAVNRG 455 +L V+++++ L L G + V+ + + + N G Sbjct: 432 GFILGGVMIIVISALSLPGCFKAIYSVIFSIGREREKTNAG 472 >UniRef50_B3EIA1 Proton-translocating NADH-quinone oxidoreductase, chain L n=27 Tax=cellular organisms RepID=B3EIA1_CHLL2 Length = 770 Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 103/337 (30%), Positives = 169/337 (50%), Gaps = 22/337 (6%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 ID L + LA++ +I FL +YS GYM + +G ++ + +F F+ML +V Sbjct: 92 IDNLTAIMLAMVTLISFLVHLYSTGYMAGDPRYGR--------FFAYLGIFTFSMLGIVL 143 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLF-GTVLVYANA 190 S+NL ++ E LSS L+G Y ++ S A K + G++ G +++Y+ Sbjct: 144 SDNLFAIYIFWELVGLSSYLLIGFYFEKDSAADAQKKAFLANRVGDIGMWLGILILYSQF 203 Query: 191 ASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAP 250 + Q A + S + A + L +G K+ FP+H WLPDA E P Sbjct: 204 HTFSYQEIFANLAAGKFGMSQ----AWLTAAGILLFMGCVGKSAQFPLHVWLPDA-MEGP 258 Query: 251 SPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDI 310 +PVSAL+ A + A + + ++ A ++ G + +AA + Q DI Sbjct: 259 TPVSALIHAATMVAAGVYFVARIFVLLTADAL----HVIAFIGAFTAFMAATIAITQHDI 314 Query: 311 KRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK-YGTRD 369 KR+LAYS+V +G + + LG+G AAL H++ H+ K LF GSG ++ + +D Sbjct: 315 KRVLAYSTVSQLGYMVLGLGVG---AYSAALFHLVTHAFFKACLFLGSGAIIHAMHHEQD 371 Query: 370 LNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 + + G+ K MP+T F LALAG+P + F+S+ Sbjct: 372 MRWMGGLRKNMPWTFATFTLATLALAGLPLTSGFMSK 408 >UniRef50_C1F220 NADH dehydrogenase I, L subunit n=2 Tax=Bacteria RepID=C1F220_ACIC5 Length = 687 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 115/354 (32%), Positives = 182/354 (51%), Gaps = 39/354 (11%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 +D L + L ++ +G L IYS+GYM H+ ++ F LF ML VV Sbjct: 79 LDPLCAVMLVMVTFVGLLIFIYSLGYMAHDE--------NFTRFFCFLALFAGAMLGVVL 130 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICT----VGVAFGLF------ 181 +N+L++++ E L+S L+G + + S AA K I T +G+ G+ Sbjct: 131 ANSLLLLFMCWEIVGLTSYLLIGFWFHKPSAAAAAKKAFITTRIGDLGLLLGMVWLYASS 190 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 GT+L Y N A + + +A ++ Q++L + + L G K+G P+H W Sbjct: 191 GTLLFYNNGAGCLEHSALA----AMVTQTTLAGMAVSTAIALLLFCGAAGKSGQVPLHVW 246 Query: 242 LPDAHSEAPSPVSALLSAVLLNCALLVLI-RYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 LPDA E P+PVSAL+ A + A + LI R Y ++ A + L + + A+ Sbjct: 247 LPDAM-EGPTPVSALIHAATMVAAGVYLIARVYPLMAAAATPHTISAALQVVAWVG-AIT 304 Query: 301 AFFI----LVQRDIKRLLAYSSVENMGLVAVELGIGG-PLGIFAALLHILNHSLAKTLLF 355 AFF + Q DIKR+LAYS+V +G + + LG+GG +G+F H++ H+ K LLF Sbjct: 305 AFFAACIAVAQNDIKRILAYSTVSQLGYMMLGLGVGGVAIGMF----HLITHAFFKALLF 360 Query: 356 CGSGNVLLKYG---TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 G+G+V+ +G +D+ + G+ + MP T V + G LAL G P F F S+ Sbjct: 361 LGAGSVI--HGCTEEQDIRNMGGLRRFMPITFVTYMCGMLALCGFPLFAGFWSK 412 >UniRef50_B5YKJ0 NADH-quinone oxidoreductase chain l n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKJ0_THEYD Length = 630 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 112/350 (32%), Positives = 186/350 (53%), Gaps = 40/350 (11%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 ID L + L ++ +G+L IYS+GYM HG+ Y+ + +LF+F+ML++V Sbjct: 80 IDQLTAVMLFVVCFVGWLIHIYSVGYM-----HGDPG---YPRYFAYLNLFVFSMLMLVM 131 Query: 132 SNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTV---GVAFGLFGTVL-V 186 NNL++++ EA L S FL+G Y ++++ +A K I+ + G A G+F + V Sbjct: 132 GNNLVMLYFGWEAVGLCSYFLIGFWYHKKTASDAGKKAFIVNRIGDFGFALGIFLLFINV 191 Query: 187 YA-NAASVMPQ------AEMAIF-WSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 YA N + P+ + IF W+ +D L+ L + L G K+ P+ Sbjct: 192 YALNYTDIFPKIPGLQGHTLNIFGWN--------ID--LITLIALLLFCGAVGKSAQIPL 241 Query: 239 HAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSV 297 H WLPDA E P+PVSAL+ +A ++ + ++ R I S+ ++ I G ++ Sbjct: 242 HVWLPDA-MEGPTPVSALIHAATMVTAGVFMVARLNPIYGM---SEIALAVVAITGAVTS 297 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 AA LVQRD+KR++AYS++ +G + + G+ A + H+ H+ K LLF G Sbjct: 298 FFAATIALVQRDMKRIIAYSTISQIGYMFIGCGMA---AYGAGIFHLYTHAFFKALLFMG 354 Query: 358 SGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 +G+V+ G D+ + G+ K MP T + F +L +AG+P F+ F S+ Sbjct: 355 AGSVMHAMAGELDIYKMGGLRKKMPITYITFLIASLTIAGIPGFSGFFSK 404 >UniRef50_C9RKX6 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKX6_FIBSS Length = 651 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 116/374 (31%), Positives = 187/374 (50%), Gaps = 34/374 (9%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 +D L + L ++ I F+ IYSIGYMR + A G ++ LF F+ML +V Sbjct: 88 VDPLSVMMLVVVTFISFMVNIYSIGYMREDRAAGR--------FFALLSLFSFSMLGLVI 139 Query: 132 SNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLV-YAN 189 + NL M+ E +SS L+G Y + S++ A+ + I+ +F L G VLV Y Sbjct: 140 ATNLFQMFIFWELVGVSSYLLIGFWYHKPSAVSASKQAFILTRFADSFFLLGIVLVSYVV 199 Query: 190 AA---SVMPQAEMAIFWSEVLKQSSLLDPT--LMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 + S + + F + + + P ++L + + G K+ +FPMH WLP+ Sbjct: 200 GSFDFSTLNSLSLIDFQKQFINLGLVTIPKSEALVLGSILIFTGGWGKSAMFPMHIWLPN 259 Query: 245 AHSEAPSPVSALL-SAVLLNCALLVLIRYY--IIICQAIGSDFPNRLLLIF--GMLSVAV 299 A E P+PVS+++ SA ++ + ++ R + IC N L LI G ++ Sbjct: 260 A-MEGPTPVSSIIHSATMVVAGVYLVARLFPFFAICD-------NALTLIMWVGAFTMVF 311 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELG---IGGPL---GIFAALLHILNHSLAKTL 353 AA Q+DIKR+LAYS++ +G + LG IG + G A+ HI H+ K Sbjct: 312 AAVIACTQKDIKRILAYSTLSQLGYMMFALGACKIGQVVAVTGWTASTFHIFTHAFFKCS 371 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 LF +G+++ + GT DL+ + G+ K M T LA++G+PPF+ F S+ I A Sbjct: 372 LFLIAGSLIHQVGTNDLDAMGGLGKKMKLTYACTLISILAISGIPPFSGFFSKDEIILAA 431 Query: 414 LARNHLLIIVLLLL 427 +H ++ L LL Sbjct: 432 FQGHHYVVFGLALL 445 >UniRef50_A8H7R2 NADH dehydrogenase (Quinone) n=8 Tax=Proteobacteria RepID=A8H7R2_SHEPA Length = 492 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 99/327 (30%), Positives = 171/327 (52%), Gaps = 11/327 (3%) Query: 126 MLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVL 185 M +V + +L ++ +E ++LS L+ + R +L AA++Y+I+ T+G F L G L Sbjct: 123 MFGIVATGDLFNVFVFLEISSLSGYALIALGKDRRALWAAYQYLIMGTIGATFILIGIGL 182 Query: 186 VYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDA 245 +Y + ++A EV + ++ AF FL++G K LFP+H WLP+A Sbjct: 183 LY-QMTGTLNMDDLANRLPEVDQTRTVFA------AFAFLIVGVCLKLALFPLHLWLPNA 235 Query: 246 HSEAPSPVSALLSAVLLNCALLVLIR--YYIIICQAIGSDFP-NRLLLIFGMLSVAVAAF 302 ++ APS V+A L+A A+ +LIR Y I + S P L ++ G++ + A+ Sbjct: 236 YAYAPSIVTAFLAATATKVAVYLLIRFTYTIFGIELSFSILPLQNLFMVLGLVGIFAAST 295 Query: 303 FILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVL 362 + + ++K + AYSS+ +G + + I P G+ A LLH+ NH+L K+ LF G V+ Sbjct: 296 AAIYKTNVKHIFAYSSIAQVGYMIIGYAINTPTGLMATLLHLFNHALMKSALFLALGAVM 355 Query: 363 LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLII 422 + G+ L+ G+ + MP T G L+L G+P F+S++ + A + + Sbjct: 356 YRIGSVQLSQFQGLGRQMPLTMAAIVVGGLSLIGVPLTVGFISKWYLLIAAVEAGMWPVA 415 Query: 423 VLLLLLLTLVLAGLVRMAARVLMAKPP 449 VL+LL L + + R+ + KPP Sbjct: 416 VLVLLGSLLAVLYIWRI-VEIAYFKPP 441 >UniRef50_A7JYE7 Na(+) H(+) antiporter subunit A/Na(+) H(+) antiporter subunit B n=7 Tax=Vibrio RepID=A7JYE7_VIBSE Length = 889 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 134/451 (29%), Positives = 226/451 (50%), Gaps = 40/451 (8%) Query: 71 HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVV 130 +DGL LF ++ IG L IY++ Y+R + ++ + LF+ ML +V Sbjct: 61 RLDGLSFLFAGLISGIGALIQIYALAYLRESDSR--------FSFHLYLTLFMLAMLGIV 112 Query: 131 TSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 S+N+++++ E TT++S L+G + ++S + A + +I+ G L G +L+ A Sbjct: 113 MSDNILLLFVFWELTTITSYLLIGFNHENKTSRKNALQSLIVTGAGGLALLAGLILLGAM 172 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 A S + I ++ + Q P+L+L+ L+G TK+ FP H WLP+A + A Sbjct: 173 AGSY--ELHTIIAQADTIAQHEWFMPSLVLI-----LLGAFTKSAQFPFHFWLPNAMA-A 224 Query: 250 PSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQR 308 P+PVSA L SA ++ + +L R + S+ L+I G ++ F L Q Sbjct: 225 PTPVSAYLHSATMVKAGIYLLARLSPVYAH---SEVWFYALVITGSITAVWCTFVALKQT 281 Query: 309 DIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTR 368 D+K +LAYS+ +G + + LG+G L + A L+ IL HS K LF GN+ GTR Sbjct: 282 DLKLMLAYSTNVALGKLTLLLGMGTDLAVSAVLMFILAHSFYKAALFMVVGNIDKATGTR 341 Query: 369 DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH-----LLIIV 423 D++ + G+ ++ + V AL+ AG PP FLS+ + + N+ LL++ Sbjct: 342 DIDQLYGLKSVLVISMVAGSLAALSKAGFPPLLGFLSKEYMYKSAVELNNWIAFVLLMVN 401 Query: 424 LLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPV 483 +L++ LT++L A R L+ + V W+ SP ++LA+G+ I P+ Sbjct: 402 ILMVALTIMLIARPFFARRDLVPIETKPVEAKKAMWV--SP------LLLALGSLI-VPL 452 Query: 484 IRILAGASTIVLSGTHD-LPAQR----STWH 509 + + I+ G+ D LPA S WH Sbjct: 453 VGLNWLDHHIIFPGSADILPAADIKATSLWH 483 >UniRef50_B6YTW5 NADH dehydrogenase (Quinone) n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTW5_THEON Length = 404 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 126/426 (29%), Positives = 203/426 (47%), Gaps = 47/426 (11%) Query: 63 IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 +F L L +D F+ + ++G + S YMR E P YY +F Sbjct: 1 MFDVTLTLSLDRTAVFFVLNVAILGIAALVASFRYMRIY----EFKPK--IPYYPTLAIF 54 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG--QRSSLEAAWKYIIICTVGVAFGL 180 + +MLL+ + + E TL+S FL+ IY + S +A WKY V L Sbjct: 55 IVSMLLIPMVQDWLSFLFLWEIMTLASYFLI-IYDWPEESVKKAGWKYF------VTMHL 107 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 F T + +M M + ++ + + ++A L+GF K GLFP+H Sbjct: 108 FDT-------SPLMLAVTMYYAFHGTFNFGAITEYSNAIVAL--FLLGFAAKAGLFPLHF 158 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFG---MLSV 297 WLPDAH APSPVSAL+S ++ L IR + A+G ++ + G +LS+ Sbjct: 159 WLPDAHPAAPSPVSALMSGAMVELGLYGTIR----VLNAVGWSVATWIVYLIGAMAVLSM 214 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVEL--GIGGPLGIFAAL-LHILNHSLAKTLL 354 A F +Q D+KRL A+S+++NMG + + + G+ G G+ + +++ H LAK Sbjct: 215 LAAIFSYALQDDVKRLFAWSTIDNMGWMYLLILAGLLGVSGVEKGVDYYVVAHGLAKAAA 274 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE------FM 408 F +G +L +GTR L GM+ TA L AL G+PPFN+F+++ + Sbjct: 275 FISTGALLYVFGTRSLKKAKGMMNTDSLTAGLMMASIFALEGVPPFNLFMNKLNVIKTLL 334 Query: 409 TITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVIL 468 T++ LA L V+ +L V+ A +L P+A R G + S +V+L Sbjct: 335 TVSPALAYFTALEWVIAFILFLRVV------HAYILSEGEPEA-KRKLAGSIALSVIVLL 387 Query: 469 LVMMLA 474 ++ M++ Sbjct: 388 ILSMVS 393 >UniRef50_C7R7H2 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Gammaproteobacteria RepID=C7R7H2_KANKD Length = 672 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 124/461 (26%), Positives = 219/461 (47%), Gaps = 47/461 (10%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 ID L L + ++ + + IYSIGYM + + ++ + LF F+ML++V Sbjct: 84 IDSLSALMMVVVTFVSLMVHIYSIGYMHDDDGYQR--------FFSYLSLFTFSMLMLVM 135 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSS----------LEAAWKYIIICTVGVAFGLF 181 +NN + ++ EA L S L+G + Q+ S + + I +G F LF Sbjct: 136 ANNFLQLFFGWEAVGLVSYLLIGFWYQKESAIFANMKAFLVNRVGDFGFILGIGAIFLLF 195 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSL----LDPTLM--------LLAFVF--LLI 227 GT YA M QAE + SE +++L LD + + ++ F+ L I Sbjct: 196 GT-FDYAPIFKSMGQAEEIMQISERSAENALGLMSLDGSFVAWGDTSWPIITFICICLFI 254 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNR 287 G K+ P+H WLPD+ E P+P+SAL+ A + A + ++ + + S+ Sbjct: 255 GAMGKSAQVPLHVWLPDSM-EGPTPISALIHAATMVTAGVFMVARMSPLFEF--SETALT 311 Query: 288 LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNH 347 ++ I G ++ +VQ DIKR++AYS++ +G + V LG+ AA+ H+ H Sbjct: 312 MVTIIGAITALFMGLVAIVQNDIKRIIAYSTLSQLGYMVVALGVS---AYSAAIFHLFTH 368 Query: 348 SLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS- 405 + K LLF G+G+V++ + +++ + G+ K +P T G LAL G P F F S Sbjct: 369 AFFKALLFLGAGSVIVALHHEQNIRKMGGLYKRLPLTYWTTLVGTLALIGTPFFAGFYSK 428 Query: 406 EFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPM 465 + + + A A+ ++ +V+ L M +++ +++ L LT SP Sbjct: 429 DAIIMAASEAQGPAASFAYFAVMAGVVVTALYSMRMLLVVFHGKSSLDEQHLNQLTESPR 488 Query: 466 VI------LLVMMLAMGTHIPQPVIRILAGASTIVLSGTHD 500 VI L V L +G + +P++ A ++++ +HD Sbjct: 489 VITWPLIALAVPSLIIGWFMTKPMLDGDYFAESLMVLTSHD 529 >UniRef50_C5NVG1 Na(+)/H(+) antiporter subunit A n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NVG1_9BACL Length = 788 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 107/372 (28%), Positives = 195/372 (52%), Gaps = 33/372 (8%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L++DGL LF ++ IG L +YS YM ++ L +Y F +F+ ML V Sbjct: 72 LNLDGLSLLFSLLITGIGTLVILYSCYYM-------SITDEKLHKFYIFLLIFMSAMLGV 124 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 V S+N++ M+ E T++SS L+ + + +S + A K +II G L G + + Sbjct: 125 VLSDNMLSMYMFWEMTSVSSFLLISYWHENDASRKGALKSLIITVFGGVLMLAG-IFILN 183 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 N +E+ E K D ++A + ++ G TK+ FP H WLPDA + Sbjct: 184 NITGSFNVSEII----EFTKNHGYNDK--YVVAMILIIFGAFTKSAQFPFHIWLPDAMA- 236 Query: 249 APSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQ 307 AP+P+S+ L SA ++ + +L+R I I + S F N +L+IFG +++ + + + Sbjct: 237 APTPISSYLHSATMVKAGIYLLLR--IGIVFSFTSSFGN-ILIIFGTITMLIGSISAIFL 293 Query: 308 RDIKRLLAYSSVENMGLVAVELGIGG-----------PLGIFAALLHILNHSLAKTLLFC 356 +D+K +LAYS++ +G++ + +GI +A HI+NH+ K LF Sbjct: 294 KDLKGILAYSTISQLGMMTLMIGIANLGLYNDNHYVYTFAFYAVCFHIINHAAFKASLFM 353 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE--FMTITAGL 414 +G + + +RD+ + G+ + MP + +L ++AG+PP + F S+ F+T+ GL Sbjct: 354 ITGIIDHSFHSRDIEKLRGIKRYMPLSFILSIIAGFSMAGIPPLSGFYSKEYFLTVVYGL 413 Query: 415 ARNHLLIIVLLL 426 ++ +L +++++ Sbjct: 414 TQSSMLYMIIVI 425 >UniRef50_Q9PMA7 NADH-quinone oxidoreductase subunit L n=43 Tax=Epsilonproteobacteria RepID=NUOL_CAMJE Length = 596 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 109/361 (30%), Positives = 179/361 (49%), Gaps = 30/361 (8%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 ID + ++++G++ YSI YM H+ + ++ + LF+F+ML +V Sbjct: 73 IDAISLTMMSVVGIVATCVHFYSIFYMAHDEGFNK--------FFAYLGLFVFSMLFLVM 124 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVGVAFGLFGTVLVYANA 190 S+N + ++ E L S L+G + + + AA + I+ + L G +Y A Sbjct: 125 SDNFLGLFVGWEGVGLCSWLLIGFWYKNDTYSFAANEAFIMNRIADLGMLLGIFWLYLQA 184 Query: 191 ASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAP 250 ++ + EV + LD ++L L IG K+ FP H WL DA + P Sbjct: 185 GTLK--------YDEVFSMAQSLDHNALILIATCLFIGAMGKSAQFPFHTWLADAMA-GP 235 Query: 251 SPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAF---FILVQ 307 +PVSAL+ A A +V Y++I + D + I +L VA F LV Sbjct: 236 TPVSALIHA-----ATMVTAGVYLVIRASTLYDLVPEVSYIIALLGAFVAIFAASMALVV 290 Query: 308 RDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGT 367 RD+KR++AYS++ +G + V G+G GI AL H+ H+ K+LLF G+GNV+ Sbjct: 291 RDLKRIIAYSTLSQLGYMFVAAGLGA-YGI--ALFHLATHAFFKSLLFLGAGNVMHAMND 347 Query: 368 R-DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLL 426 + D+ + G+ K + TA+L G+LALAG+ PF F S+ + + H I ++LL Sbjct: 348 KLDIKKMGGLFKPLKITAILMCIGSLALAGIYPFAGFFSKDLILGYSFISFHHGIFLVLL 407 Query: 427 L 427 + Sbjct: 408 I 408 >UniRef50_Q1H3T5 NADH dehydrogenase (Quinone) n=12 Tax=Proteobacteria RepID=Q1H3T5_METFK Length = 966 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 132/458 (28%), Positives = 220/458 (48%), Gaps = 38/458 (8%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 +DGL LF ++ ++G + IY+ Y+ + G +Y + LF+ +ML V Sbjct: 73 FRLDGLSLLFSLMILLVGLIVVIYARYYLSPRDSMGR--------FYSYLLLFMGSMLGV 124 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 V S N+I + E T+LSS L+ + QR + + T G + G L+ N Sbjct: 125 VLSENIIQLLMFWELTSLSSFLLISYWQQREEASRGARMALTITGGGGLAMLGGFLLLGN 184 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 A +++ + + L++L VF TK+ FP H WLP+A + A Sbjct: 185 MAGSYDLSDILLAGDAIRSHEHYPLMLLLILLGVF------TKSAQFPFHFWLPNAMA-A 237 Query: 250 PSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQR 308 P+PVSA L SA ++ + +L R + + G+ ++ G+ + ++ L + Sbjct: 238 PTPVSAYLHSATMVKAGIFLLARLFPALS---GTPEWTWIVSGVGIATFVTGSYIALFKH 294 Query: 309 DIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTR 368 D+K LLAYS++ ++GL+ GIG PL + A + HI+NH+ K LF +G V + GTR Sbjct: 295 DMKALLAYSTISHLGLIVALFGIGTPLAVVAGIFHIINHATFKASLFMLAGIVDHETGTR 354 Query: 369 DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLL 428 D+ + G+ + MP++AVL A A+AG+P N F+S+ M + +A H LL Sbjct: 355 DIRHLGGLRRYMPYSAVLMVIAAAAMAGIPGLNGFISKEMFLDQIVA--HGNTFPHQWLL 412 Query: 429 LTLVLAGLV-------RMAARVLMAKPPQAVNRG--DLGWLTTSPMVILLVMMLAMGT-- 477 +V AG V R+A V P + + D P+ IL+ +A+G Sbjct: 413 PAIVTAGAVFSAAYSIRIAHSVFFGSEPDDLPKAPHDPSSGMQIPVAILVAACVAVGVLP 472 Query: 478 HIPQPVIRILAGASTIVLSGTHDLPA-QRSTWHDFLPS 514 I +P++ ++ AST+ + PA + WH P+ Sbjct: 473 AIAEPLVTLVT-ASTLQTAP----PAFHLAIWHGLTPA 505 >UniRef50_A6Q6W0 Ni-Fe hydrogenase, membrane subunit HycC/HyfB n=4 Tax=Bacteria RepID=A6Q6W0_SULNB Length = 627 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 114/200 (57%), Gaps = 12/200 (6%) Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 +K G P+H WLP AH EAPSPVSAL+S V+L A+ + R+ + ++ ++L Sbjct: 146 SKAGAVPLHVWLPYAHPEAPSPVSALMSGVMLKVAIYGMFRFLFDVLYPWPLEW-GIVIL 204 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFA 339 + G LS V + L + DIK LLA S+EN+G++ + G+G A Sbjct: 205 VIGALSSLVGVLYALSEHDIKALLANHSIENIGIILMGFGMGMIFDSMHLKVLSSFAFIA 264 Query: 340 ALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPP 399 AL H NH K+LLF G+G+VL + T+++ G++K MP TA+ F +++++ +PP Sbjct: 265 ALFHTFNHMSFKSLLFMGAGSVLHQTHTKNIEKYGGLIKSMPITALTFLLASISISALPP 324 Query: 400 FNIFLSEFMTITAGLARNHL 419 N FLSE+M + L +HL Sbjct: 325 TNGFLSEWMIFQSMLGSSHL 344 >UniRef50_A9B485 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=Chloroflexi (class) RepID=A9B485_HERA2 Length = 736 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 114/385 (29%), Positives = 189/385 (49%), Gaps = 35/385 (9%) Query: 57 AADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHE---VAHGELSPVTLC 113 A D F G +DG L LA++ + + ++S+GYM H+ H S Sbjct: 103 APDGSGFFKFGY--RLDGATVLMLAMVTLAAWCIHLFSVGYMAHDEFPTGHQRQS----- 155 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIIC 172 ++ + LF +ML + ++NL++ + E L S L+G + + S+ EAA K I Sbjct: 156 RFFSYIALFTASMLGMTLADNLLLFFICWELMGLCSFLLIGFWFFKPSAREAAKKAFITT 215 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAIFWS----EVLKQSSLLDPTLMLLAFVFLLIG 228 +G + G + +Y A S+ E ++ E +K ++ L P + + + L+ Sbjct: 216 RIGDVGMMLGMMYIYNKAGSLTFGHEPGQIYNGEFLESIKTATSLIPGISAASLMAGLVF 275 Query: 229 FGT--KTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFP 285 GT K+ FP+H WLPDA E P+PVSAL+ +A ++ + ++IR + I A+ P Sbjct: 276 LGTVGKSAQFPLHVWLPDA-MEGPTPVSALIHAATMVAAGVFLVIRTFPIF--AVSEVLP 332 Query: 286 NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 ++ G + AA + Q DIKR+LA+S++ +G + LGIG + AAL H+L Sbjct: 333 --VVAFIGAFTALFAALIAVAQYDIKRILAFSTLSQLGFMVAALGIGAWV---AALFHLL 387 Query: 346 NHSLAKTLLFCGSGNVLL---------KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAG 396 H+ K LLF GSG+V+ +D+ + + K MP T + + G AL G Sbjct: 388 THAFFKALLFLGSGSVIHGMEATVGHDPDKAQDIRNMGTLRKFMPITFLTYMAGFFALIG 447 Query: 397 MPPFNIFLSEFMTITAGLARNHLLI 421 +PPF F S+ I +H ++ Sbjct: 448 IPPFAGFWSKDEIILDAFLHHHYVV 472 >UniRef50_C0JX69 Subunit 5 of NADH-plastoquinone oxidoreductase n=1 Tax=Pyramimonas parkeae RepID=C0JX69_9CHLO Length = 642 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 121/426 (28%), Positives = 199/426 (46%), Gaps = 46/426 (10%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG---- 61 +F L T + L+ F + L + LGI+++ LA++ Q + Sbjct: 14 VFPLFSATVMGLGLISFQKATQSLRRDLAFFTIFLLGISVIFSLAIFFFQYNGNGSYQWE 73 Query: 62 ------EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 + F+ + ID L L ++ + FL IY+ GYM ++ + + Sbjct: 74 MEWVVSQNFSLEMGYLIDPLSSTMLVVVSTVAFLVMIYTDGYMNYDQGY--------VRF 125 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVG 175 + + LF +ML +V S NL+ ++ E L S L+G + R++ A + I Sbjct: 126 FSYLSLFTASMLGLVLSTNLVQVYIFWELIGLCSYLLIGFWFTRTTAGDACQKAFITNRM 185 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVF---LLIGFGTK 232 FGL +L + E+A +L+ +DP L+ L +F L +G +K Sbjct: 186 GDFGLLLGILGFYWLTKSFHFNEIAFRLESLLQ----VDPKLIPLGTLFAILLFLGPISK 241 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLI-RYYIIICQAIGSDFPNRLLLI 291 + FP+H WLPDA E P+P+SAL+ A L A + L+ R + I Q FP + I Sbjct: 242 SAQFPLHVWLPDAM-EGPTPISALIHAATLVAAGVFLVGRMFPIFDQ-----FPIVMSTI 295 Query: 292 --FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 G L+ + A Q D+K+ LAYS+V +G + + +G+G A L H++ H+ Sbjct: 296 AWTGCLTAFLGATIATTQVDLKKGLAYSTVSQLGYMMMAMGVGS---YSAGLFHLITHAY 352 Query: 350 AKTLLFCGSGNVL---------LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 +K LLF GSG+ + Y +++N + G+ K MP TA+ F G L++ G PPF Sbjct: 353 SKALLFLGSGSAIHGMEGAVGFSPYINQNMNQMGGLRKKMPITAITFLIGTLSICGFPPF 412 Query: 401 NIFLSE 406 F S+ Sbjct: 413 ACFWSK 418 >UniRef50_A6Q8K1 NADH-quinone oxidoreductase, chain M n=3 Tax=Epsilonproteobacteria RepID=A6Q8K1_SULNB Length = 479 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 105/354 (29%), Positives = 178/354 (50%), Gaps = 19/354 (5%) Query: 107 LSPVTLCD---YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE 163 LS T+ D Y+ LF + V S NL+ + E T + FLVGI+G + Sbjct: 95 LSSWTMKDPRNYFSLLVLFSGPIFGVFMSTNLLWFFIFWELTLVPMFFLVGIWGAEGRIY 154 Query: 164 AAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFV 223 AA K+ + V L L+Y E IF ++K++ L P L+ + Sbjct: 155 AAVKFFLYTHVASMLILLAFFLIYK---------ETGIFDMTMVKEAMLSTPVLV---WW 202 Query: 224 FLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD 283 L IGF K +FP H WLPDAH +AP+PVSALL+ VLL +IR +++ Sbjct: 203 LLFIGFAVKMPIFPFHTWLPDAHVQAPAPVSALLAGVLLKMGAYAMIRMVVLMLPEQSEH 262 Query: 284 FPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLH 343 F ++L+ G++++ A F L + +K+++AYSS+ +MGLV V + G+ AAL Sbjct: 263 F-AWVILVLGLVTLFYAGFMALYETHLKKMVAYSSISHMGLVTVAIATLSYAGLSAALYE 321 Query: 344 ILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 ++ H+L + LF +G + + G+ + + G+++ P+ + +F LA G+P F Sbjct: 322 MIGHALIISPLFLIAGFLHSRTGSWQMKDMGGLMQKAPYLSAIFVLAGLAALGLPGTMGF 381 Query: 404 LSEFMTITAGLARNHLLIIVLLLLLLTLVLAG-LVRMAARVLMAKPPQAVNRGD 456 + E + A + + + +IV + L +++ AG ++ RV+ + V + D Sbjct: 382 IGELTILIAAIEQYGIGLIV--VALGSMIGAGYIIWTFRRVVYGEKSALVEKSD 433 >UniRef50_B9XHI6 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Verrucomicrobia RepID=B9XHI6_9BACT Length = 636 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 116/410 (28%), Positives = 198/410 (48%), Gaps = 31/410 (7%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L +D L + + I+ +G L I+S YM+ + + Y+ LF+F+ML + Sbjct: 86 LKLDALSMMMMLIVTGVGGLIHIFSWEYMKGDPGYSR--------YFACLSLFIFSMLGI 137 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFG-LFGTVLVYA 188 V ++N ++M+ E +SS L+G + +R S A K + FG L G +LV+A Sbjct: 138 VMADNFLMMFIFWELVGISSYLLIGFWYERPSAADACKKAFLTNRLGDFGFLVGILLVWA 197 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 + + + L + +L + A + + G K+ FP+H WLPDA E Sbjct: 198 TLGHRLNFDAL----KQYLDKHTLEFAGVATAAGLLVFCGAAGKSAQFPLHVWLPDA-ME 252 Query: 249 APSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQ 307 P+PVSAL+ +A ++ + +L R Y ++ + ++ G ++ +AA + Q Sbjct: 253 GPTPVSALIHAATMVAAGVYMLCRIYFLL--DVSGSHALEVIAWIGGITALLAAVIAIQQ 310 Query: 308 RDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK-YG 366 DIKR+LAYS++ +G + + +G GP A+ H+ H+ K LLF G+G V+ + Sbjct: 311 NDIKRILAYSTLSQLGYMVMAVGTHGPT---PAMFHLTTHAFFKALLFLGAGAVIHAVHH 367 Query: 367 TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLL 426 +++ + + K MP T V F G LALAG PP + F S+ + + +H + +L L Sbjct: 368 EQNIWKMGALRKKMPTTFVTFTIGTLALAGCPPLSGFYSKDGILGQAMETHHYGLFILGL 427 Query: 427 LLLTLVLAGLVRMAARVLMAKP-PQAVNR-----GDLGWLTTSPMVILLV 470 L L + R+ P +A + G L W P++IL V Sbjct: 428 LAAILTTFYMFRLVFVAFYGAPRSEAADHAHEAPGMLKW----PLIILAV 473 >UniRef50_Q3ITM9 pH adaptation potassium efflux system protein D 3; sodium/hydrogen antiporter subunit n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3ITM9_NATPD Length = 491 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 104/328 (31%), Positives = 167/328 (50%), Gaps = 13/328 (3%) Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTV 174 +Y F L + M+ ++ + +L M+ +E +SS LV R S AA+KY+++ TV Sbjct: 112 FYSGFLLLVGGMMGILLTGDLFNMYVFLEIMAISSYALVSASKYRWSTYAAFKYLLVGTV 171 Query: 175 GVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 G F L G LV A+ ++ + E+L DP +++ AF+ + +G K Sbjct: 172 GAGFYLLGVALVLASTGTLTMR-----LLPELLAAVGYTDP-VVVAAFILMAVGLAIKIA 225 Query: 235 LFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIR--YYIIICQAIGSDFP--NRLLL 290 LFP+H WL DAH+ AP +SA++SA++ A+ R + + I ++ P LLL Sbjct: 226 LFPVHTWLADAHASAPDGISAVISALVPAVAVYAFARVLFTVYTLDFIAAN-PVIGNLLL 284 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 + + S+ +FF L+Q IK +LAYS+V GL+ V + I +F A+L I H + Sbjct: 285 VAALFSLFAGSFFALLQDHIKLVLAYSTVSQFGLIFVGIAIANETAVFGAILQIFGHGVV 344 Query: 351 KTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 K LF +G L++ G R L G+ + P A F +A+ G+PP F ++ Sbjct: 345 KASLFVLAGMFALRFGGIRTLKEYSGVAERAPIMAGAFAVLGIAMIGLPPTVGFAGKWY- 403 Query: 410 ITAGLARNHLLIIVLLLLLLTLVLAGLV 437 I G L + LL+L TL+ AG + Sbjct: 404 IALGAFEAGLWQVSLLVLGSTLLSAGYI 431 >UniRef50_A8ERK5 NADH-quinone oxidoreductase, L subunit n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ERK5_ARCB4 Length = 628 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 125/480 (26%), Positives = 236/480 (49%), Gaps = 53/480 (11%) Query: 18 SLLCFACRKRRLSATR-----TVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHI 72 SL + +K ++S T+T L S ITL L L + + + IF WL++ Sbjct: 22 SLYFYHIKKSKISENYFALIGTITPLISFLITLSLFLRM-LEEKIIFKQHIFT---WLNV 77 Query: 73 DGLGGLFLAILG------------VIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 D L + +A LG +G+L IY+IGYM+ + G+ ++ +F+ Sbjct: 78 DKLN-IEMAFLGDNLSIFMSMFVTFVGWLIHIYAIGYMKGDDGFGK--------FFAYFN 128 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYIIICTVGVAFG 179 LFL +ML++V ++N I+++ E + S L+ Y G + ++ AA K I+ VG Sbjct: 129 LFLASMLILVLADNPIILFIGWEGVGVCSYLLIKFYYGSKDNVIAANKAFIVNRVGDFGF 188 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L G V ++ + Q +++ + + +L++L+ L +G K+ P++ Sbjct: 189 LLGVVTLFF----ALGQVDLS--FGTIEANIGNTTNSLLILSGFLLFVGAMGKSAQVPLY 242 Query: 240 AWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 WLPDA + P+P+SAL+ +A ++ + ++ R++ + G + + G +S Sbjct: 243 VWLPDAMA-GPTPISALIHAATMVTAGVYMVARFHFLYA---GIEEIGIFIAYIGAISAL 298 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFA-ALLHILNHSLAKTLLFCG 357 +AA Q DIK++LAYS++ +G + + +G LG ++ L H+ H+ K +LF G Sbjct: 299 LAAVIATKQTDIKKILAYSTMSQLGYMFIAVG----LGFYSTGLFHVFTHAFFKAMLFMG 354 Query: 358 SGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 +G +++ + +++ + +P + F G +A++G+PPF+ F S+ + A Sbjct: 355 AGGIIIALHHEQNIFKIAKHRANLPIIGLTFLIGVIAISGIPPFSGFFSKDAILAAAFQE 414 Query: 417 NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMG 476 LI + L L + RM V +A N D+ ++ TS + L +++LA+G Sbjct: 415 GQYLIYGIALFTAFLTAYYMFRMYFIVFVAP-----NHHDVDYVYTSKTITLPLLILAIG 469 >UniRef50_Q3Z7Z2 Proton-translocating NADH-quinone oxidoreductase, M subunit n=5 Tax=Dehalococcoides RepID=Q3Z7Z2_DEHE1 Length = 497 Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 110/369 (29%), Positives = 185/369 (50%), Gaps = 23/369 (6%) Query: 129 VVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 V S +L++ + E + FL+ I+G +A KY++ G AF L G ++++ Sbjct: 129 VFVSLDLLLFFIFWELELIPMYFLISIWGAGRKEYSALKYVLYTLFGGAFILAGILILFF 188 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 S+ ++A S L ++ L P +M+L F IGF K FP H WLPDAH++ Sbjct: 189 ATGSL----DIASLASTDL--NNFLRPAMMVLTFFMFFIGFAIKLPAFPFHTWLPDAHTD 242 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQR 308 AP+ S +L+ LL ++R + + + D+ L+L +++V A L Q Sbjct: 243 APTAASVILAGTLLKMGGYAMLRLNVAMFPDVCRDWAP-LILTIAVINVIYGAAITLKQT 301 Query: 309 DIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTR 368 DIKRL+AYSSV +MG V + + G + + A+L + +H + LLF +G V+ R Sbjct: 302 DIKRLIAYSSVSHMGFVLLGIFTLGEISMNGAVLQMFSHGIITGLLFAITGVVMHNTHER 361 Query: 369 DLNVVCGMLKIMPFTAVLF---GGGALALAGMPPF----NIFLSEFMTITAGLARNHLLI 421 D+N + G+ K MP TA++F G GA+A+ F ++FL F + + + Sbjct: 362 DINKLGGLAKQMPRTAIIFILAGLGAMAVPATSGFIAEVSVFLGSFQS---SVVPGGQVF 418 Query: 422 IVLLLLLLTLVLAGLVRMAARVLMA---KPPQAVNRGDLGWLTTSPMVILLVMMLAMGTH 478 +L LL L L A ++ RV + + Q V D + S ++ LV+M +G + Sbjct: 419 TMLCLLGLVLAAAYILWTVQRVFLGPGLEKFQMVKDADKTEIVFS--LVFLVVMFGVGLY 476 Query: 479 IPQPVIRIL 487 PQ ++ ++ Sbjct: 477 -PQIIVDVI 484 >UniRef50_Q2FZV1 Na(+)/H(+) antiporter subunit A1 n=72 Tax=Bacillales RepID=MNHA1_STAA8 Length = 801 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 106/336 (31%), Positives = 172/336 (51%), Gaps = 34/336 (10%) Query: 86 IGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEAT 145 IG L +YSIGY+ G ++Y + LF+ ML VV S+N+I+++ E T Sbjct: 90 IGSLVVLYSIGYLSKSEQLG--------NFYCYLLLFMGAMLGVVLSDNVIILYLFWELT 141 Query: 146 TLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWS 204 + SS L+ + +R +S+ A K +II G L+ +P +I + Sbjct: 142 SFSSFLLISFWRERQASIYGAQKSLIITV------FGGLSLLGGIILLAIPTQSFSIQY- 194 Query: 205 EVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLN 263 + S + + + A + ++IG TK+ FP + WLPDA EAP+PVSA L SA ++ Sbjct: 195 MIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAM-EAPTPVSAYLHSATMVK 253 Query: 264 CALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMG 323 L ++ R I + G + L+ G++++ A+ Q+D+K +LA+S+V +G Sbjct: 254 AGLYLIARMTPIFAASQGWVWTVTLV---GLITLFWASLNATKQQDLKGILAFSTVSQLG 310 Query: 324 LVAVELGIGG-------------PLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDL 370 ++ LGIG AA+ H++NH+ K LF +G V GTRD+ Sbjct: 311 MIMAMLGIGAISYHYQGDDSKIYAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDV 370 Query: 371 NVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 + G+L IMP + + AL++AG+PPFN FLS+ Sbjct: 371 KKLGGLLTIMPISFTITVITALSMAGVPPFNGFLSK 406 >UniRef50_D2QSX4 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Bacteroidetes RepID=D2QSX4_9SPHI Length = 642 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 106/359 (29%), Positives = 185/359 (51%), Gaps = 34/359 (9%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 ID L L L ++ +G L +YSIGYM H+ G+ + F +LF+F MLL+ Sbjct: 87 FQIDQLSLLMLLVVTGVGSLIHLYSIGYMSHDEGFGK--------FMAFLNLFIFFMLLL 138 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVGVAFGLFGTVLVYA 188 V +N ++M+ E L S L+G + + S AA K ++ +G L G ++ Sbjct: 139 VMGSNYVIMFIGWEGVGLCSYLLIGFWNKNISYNNAARKAFVMNRIGDLGFLLGIFMLIN 198 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLL---DPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDA 245 +V + ++ KQ++ L D T++ + + L +G K+ P++ WLPDA Sbjct: 199 TFGTVE--------YVDIFKQATSLAVGDKTILAIT-LLLFVGAMGKSAQVPLYTWLPDA 249 Query: 246 HSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFG--MLSVAVAAF 302 + P+PVSAL+ +A ++ + +++R ++ A P L +I G +++ +AA Sbjct: 250 MA-GPTPVSALIHAATMVTAGIYMVVRSNVLYTLA-----PLTLEIIGGIAIVTALLAAS 303 Query: 303 FILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVL 362 L+Q DIK++LAYS+V +G + + L A + H++ H+ K LLF G+G+V+ Sbjct: 304 IGLLQNDIKKVLAYSTVSQLGYMFLGL---SATAYTAGMFHVITHAFFKALLFLGAGSVI 360 Query: 363 LKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 +D+ + G+ K +P T + F G +A++G+PPF F S+ + N LL Sbjct: 361 HAMSDEQDIRKMGGLRKALPVTFITFLIGTIAISGLPPFAGFFSKDEILAHVFEHNKLL 419 >UniRef50_B1KJV8 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Shewanella RepID=B1KJV8_SHEWM Length = 622 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 103/344 (29%), Positives = 181/344 (52%), Gaps = 24/344 (6%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L++D L + + I+ IG L +YS YM+ + +C ++ + +LF+ ML + Sbjct: 78 LYLDPLSLVMITIITCIGALIHLYSASYMKEDA--------DICRFFVYLNLFVSAMLFL 129 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 V ++NLI+++ E L S L+G Y + + +AA K II +G L G +L++ Sbjct: 130 VLADNLILLYLGWEGVGLCSYLLIGFWYREVKNSQAANKAFIITRIGDTAMLIGIILIFY 189 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPT---LMLLAFVFLLIGFGTKTGLFPMHAWLPDA 245 ++ Q ++ ++L+ S LL L L + L G K+ P+H+WLPDA Sbjct: 190 QFDTLNIQ-QIQAHSQQLLQNSELLTKGAVGLTSLCCLLLFAGAAGKSAQVPLHSWLPDA 248 Query: 246 HSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRL--LLIFGMLSVAVAAFF 303 + P+PVSAL+ A + A + L+ I + S P+ L + I G++++ + A Sbjct: 249 MA-GPTPVSALIHAATMVTAGIYLVARNI----ELFSLAPDVLHFIAIVGVITLILGATS 303 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLL 363 L Q D+KR+LAYS++ +G + + LG+G AA+ H++ H+ K LLF +G ++ Sbjct: 304 ALAQTDLKRILAYSTISQLGYMFLALGVGSA---SAAVFHLMTHAFFKALLFLSAGALIY 360 Query: 364 -KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 + +++ + G+ K P A+ FG G ALA +P + F S+ Sbjct: 361 CMHHEKNIFKMGGLRKSQPLLALSFGIGCAALASLPMTSGFFSK 404 >UniRef50_A9A3Z6 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Thaumarchaeota RepID=A9A3Z6_NITMS Length = 517 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 116/441 (26%), Positives = 199/441 (45%), Gaps = 47/441 (10%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEV-----AHGELSPVTLCD------------ 114 +DGL F I+ V+ + +YS YM H+ +++P + Sbjct: 72 LDGLASPFAIIIYVLSTILVLYSKPYMIHKFHEQFEEEQKINPSSSGQSSVVESSALSNY 131 Query: 115 -------YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWK 167 Y+ + +F ML V S NLI + E + FLV ++G + Sbjct: 132 VNAKSGLYFALYLVFAMGMLGTVMSTNLIEFYIFFEVMLIPGFFLVALWGDGPRRKIGLM 191 Query: 168 YIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLI 227 ++ G L G +++ S F +K+S + +M+ A + + I Sbjct: 192 FLFWTHAGAVVLLLGFLMIGLTIGS---------FDFADIKESEIPQDVVMISA-IAIAI 241 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNR 287 G G K +F H WLP H AP+P+SALLS ++ + R +I + + S F Sbjct: 242 GLGVKLAVFMFHVWLPYVHGSAPTPISALLSPAMIGIGAYGVFR---LIVEFLPSTFAEL 298 Query: 288 LLL--IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 + I+G++++ L+Q D+KRLLAYSS+ MG + +G +G+ A + + Sbjct: 299 SIWFHIWGLVTMLYGGAMALMQDDLKRLLAYSSISQMGYLLFGIGSMSAMGLAGAEMMYI 358 Query: 346 NHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 H L K +LF +G +++K GTR ++ + G+ MP TAV GAL + G+PP + F+ Sbjct: 359 THGLGKGILFMMAGIIIVKVGTRSISKLGGLAGKMPITAVCAVIGALTIMGVPPTSGFMG 418 Query: 406 EFMTITAGLARN-------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLG 458 E++ L + L L+ L +A ++ M RV K P+ + + G Sbjct: 419 EWILFYGALETAIEEGSTLRAVTFGLGLVATALTMAYMLWMLKRVFFGKTPEHLEKVKEG 478 Query: 459 -WLTTSPMVILLVMMLAMGTH 478 W T+PM++L + +G + Sbjct: 479 SWYMTAPMMVLAGFTVVLGIY 499 >UniRef50_C1SM60 NADH dehydrogenase subunit L n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM60_9BACT Length = 638 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 109/359 (30%), Positives = 184/359 (51%), Gaps = 32/359 (8%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 +D L + L ++ I + IYSIGYM HG+ ++ + +F +ML++V Sbjct: 79 VDPLSSIMLIVVTTISLMVHIYSIGYM-----HGDPG---FWRFFTYLSVFTLSMLVLVL 130 Query: 132 SNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLF-GTVLVYAN 189 NN ++++ E LSS L+G + ++S+ +A K ++ +G FG + G +LV Sbjct: 131 GNNFLMLFVGWELVGLSSYLLIGFWFHKKSAADACKKAFVMNRIG-DFGFYIGLLLVIVT 189 Query: 190 AASVMPQAEMAIFWSEVL---KQSSLL----DPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 SV F SE + K++ + +L+ L L G K+ FP+H WL Sbjct: 190 FRSVNYSDA---FNSEAIHHIKEAGFMLFGMKVSLIDLMTFGLFCGAMGKSAQFPLHTWL 246 Query: 243 PDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD--FPNRLLLIFGMLSVAVA 300 PDA E P+PVSAL+ A + A + Y + C A+ S+ ++ ++ G ++ + Sbjct: 247 PDA-MEGPTPVSALIHAATMVTAGV----YMVARCNALFSEAHMTSQFIVFAGAMTAFLG 301 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 A L Q D+KR+LAYS+V +G + + G+G + AA+ H+ H++ K LLF SG+ Sbjct: 302 ASIGLTQYDLKRILAYSTVSQLGYMIMATGVGAYV---AAIFHLFTHAMFKGLLFLCSGS 358 Query: 361 VLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH 418 V+ + D+ ++ G+ K MPFT + G +A+AG+PP F S+ + A H Sbjct: 359 VMHAMHDQLDVRLMGGLKKKMPFTHWTYLIGCIAIAGIPPLAGFWSKDEILAMTFASGH 417 >UniRef50_C5EMF0 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMF0_9FIRM Length = 494 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 121/473 (25%), Positives = 230/473 (48%), Gaps = 29/473 (6%) Query: 29 LSATRTVTVLHSLG-ITLLLILALWVVQTAADAGEIFAA---------GLWLHIDGLGGL 78 LS R V SLG I+++ +++ V DAGE + G + L GL Sbjct: 25 LSGRRARNV--SLGAISIVTVMSFAVFLYCMDAGESYTYMMGHFPAPWGNEIRAGVLEGL 82 Query: 79 FLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVM 138 + GV+ L+ +G M H E + + L ++ + L ++L ++ +N+L Sbjct: 83 TATVFGVVMLLS---VVGGMDHTYEDVEGTKLNL--FFIMIDMMLSSLLALIYTNDLFTA 137 Query: 139 WAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASV-MPQA 197 + +E T++ L+ I + SL AA +Y+I+ +G L G L+Y + M A Sbjct: 138 YVFVEINTIAGCGLIMIRQKGRSLSAAIRYMIMSQLGSGLFLIGLSLLYDVTGHLLMSPA 197 Query: 198 EMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALL 257 + A+ E + + P L++LA + +G K+GL+P H W+PD + A SA+L Sbjct: 198 KEAVALIEATGKYGI--PMLVILAVIS--VGLAIKSGLYPFHYWIPDTYGYATPTASAIL 253 Query: 258 SAVLLNCALLVLIR-YYIIICQA--IGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLL 314 S ++ + +LI+ +Y ++ + I S N +L +FG+ + + + +++ D +R++ Sbjct: 254 SGLVSKGYIFLLIKIFYRVLGRENVIASQIVN-VLYLFGLAGMIMGSVHAIMEEDTRRMI 312 Query: 315 AYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS-GNVLLKYGTRDLNVV 373 AYSSV +G + + +G+G G+ AA+ H+ HS K LLF + G + +D + Sbjct: 313 AYSSVAQIGYIYMGIGLGTQAGMVAAVFHMFTHSATKALLFISAVGLYEVSGDKKDYRSL 372 Query: 374 CGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVL 433 G P + F GAL++ G P F+S+ + T+ L H +I L++L ++ L Sbjct: 373 RGAGYRNPLAGIGFAVGALSMVGFPMLAGFISKLLFATSALQSPHKMIPTLIVLAVSTTL 432 Query: 434 AGLVRMAARVLMAKPPQAVNRGDL-GWLTTSPMVILLVMMLAMGTHIPQPVIR 485 + + + + + +G+ W + ++ +++ L +G QPV++ Sbjct: 433 NAIYFLRLVITLYSGGGSERKGNASSWKLRAAILCFILLNLVLGLK-SQPVVQ 484 >UniRef50_C8NL94 NADH dehydrogenase (Quinone) n=18 Tax=Bacteria RepID=C8NL94_COREF Length = 516 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 118/419 (28%), Positives = 201/419 (47%), Gaps = 33/419 (7%) Query: 22 FACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA------AGLWLHIDGL 75 F + R+ T+ L + G+ +LL++ L+ V AD F+ + L L +D L Sbjct: 29 FPLPEERVRLRSTIN-LSAAGLKVLLVMLLFPVVLDADLRPEFSMPFLPGSDLVLRVDPL 87 Query: 76 GGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNL 135 F + V+ LT +Y+IGY+ G+ ++GFF L + + + S NL Sbjct: 88 ALFFATLSAVLWLLTTVYAIGYL----GEGQ----NRSRFFGFFSLCVTATVGISFSGNL 139 Query: 136 IVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTV--LVYANAASV 193 I E TL + LV +G R+SL+AA Y+ G L G V +YA Sbjct: 140 ITFLVFYEMLTLVTYPLVAHWGDRASLKAARVYLRYTLSGGLALLIGVVWLTIYAGPVDF 199 Query: 194 MPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPV 253 P + + +EV S P + ++ F L+ G G K L P+H WLP+A AP+PV Sbjct: 200 APGGAVGV--TEVATHS----PGIAIVIFALLVGGLGVKAALVPLHGWLPNAMV-APAPV 252 Query: 254 SALLSAV-LLNCALLVLIR-----YYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQ 307 SALL AV ++ + ++R Y I + +G P LL+ +++ ++ L Q Sbjct: 253 SALLHAVAVVKAGVFGIVRVIDDVYGIGVASELGVLTP---LLVVACVTIIYGSYQALRQ 309 Query: 308 RDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGT 367 D+K+ LA+S+V + VAV + + G+ + H+++ + K LF +G G Sbjct: 310 IDLKKRLAFSTVSQVSYVAVGISLATVAGVTGGVAHLVHQGIMKITLFFCAGLYAETLGA 369 Query: 368 RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLL 426 + ++ + G+ MP T++ F GA + G+PP F+S++ L +H ++ +L+ Sbjct: 370 KRVDQLTGLGHRMPGTSLAFTIGAFGMIGLPPTAGFISKWQLGVGALEADHSWVVAVLV 428 >UniRef50_A2SS19 Membrane bound hydrogenase subunit mbhH n=3 Tax=Euryarchaeota RepID=A2SS19_METLZ Length = 523 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 127/450 (28%), Positives = 213/450 (47%), Gaps = 47/450 (10%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 IDG G L ++ F +Y I + E +Y + L + +V+ Sbjct: 90 IDGFGAFMLLSAAIVSFAVVLYLISSQKERSGKSE--------FYALYLLLTAGVFGMVS 141 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSSL--EAAWKYIIICTVGVAFGLFGTVLVYAN 189 + ++ + +E +L+ A LV Y +R + E A KY+I+ TVG LF L+YA Sbjct: 142 TGDMFNFFVFLEINSLAGAALVS-YHRRGGIAAEGALKYLIVNTVGGLMVLFAIGLLYAQ 200 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 S+ MA+ S++ TL ++A V + K G P H PDA+S A Sbjct: 201 YNSL----NMAVIASQMTLS------TLNIIALVLFVAALAMKAGSVPFHFATPDAYSVA 250 Query: 250 PSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNR----LLLIFGMLSVAVAAFFIL 305 PS ++A + V L + R I+ G F +++I G+LS+ + + Sbjct: 251 PSGITAAM-IVASQAGLYGMFR---ILFTLYGDTFNTVTIGWVVIILGVLSMVIGVTMAI 306 Query: 306 VQRDIKRLLAYSSVENMGLVAVELGI-----GGPLGIFA--------ALLHILNHSLAKT 352 Q+D+KRLLAY +V G + + +G+ G PL + + L HI+NH++ K Sbjct: 307 PQKDVKRLLAYHAVSQTGYMLLGVGVALAVLGDPLAMASYGQTAMEGGLFHIINHAMYKG 366 Query: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LLF G V+ + G LN + G+ M +T + F GALA+AG+PPFN F S+ M + Sbjct: 367 LLFLAVGAVIYRTGVWSLNKMGGLGHNMKWTMIFFLIGALAIAGIPPFNGFASKLMIYES 426 Query: 413 GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA-KPPQAVNRGDLGWLTTSPMVILLVM 471 A N L I+ +++ + L LA +++ + M + P+ ++ L + MVIL + Sbjct: 427 VFAFNPALSIIAMVVSI-LTLASFMKVFHSMFMGPQLPEYAEVKEVPKLMIAGMVILTIF 485 Query: 472 MLAMGTHIPQPVIR--ILAGASTIVLSGTH 499 ++ G +P V+ I A+ ++ G + Sbjct: 486 VIGFGL-VPDLVVNNLIAPAANALIDKGAY 514 >UniRef50_Q49W91 Na(+)/H(+) antiporter subunit A1 n=19 Tax=Bacillales RepID=MNHA1_STAS1 Length = 805 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 113/358 (31%), Positives = 188/358 (52%), Gaps = 34/358 (9%) Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 F L++DGLG LF ++ IG L +YSI Y+ + G +Y + LF+ Sbjct: 68 FGMNFNLYVDGLGLLFSLLITGIGCLIVLYSISYLSRQEQLGH--------FYCYLLLFM 119 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYIIICTVGVAFGLFG 182 ML +V S+NLI+++ E T+ SS L+ + +++S+ A K +++ TV L G Sbjct: 120 GAMLGLVLSDNLIILYLFWELTSFSSFLLISFWRDKQASIYGAQKSMLV-TVFGGLSLLG 178 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 +++ + A E+ SE+ Q+S + + + +LIG TK+ FP + WL Sbjct: 179 GIILLSIAGGTTSIQELINNASEI--QTS----PFFIFSMILVLIGAMTKSAQFPFYVWL 232 Query: 243 PDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 PDA EAP+PVSA L SA ++ L ++ R I + G + + G++++ A+ Sbjct: 233 PDAM-EAPTPVSAYLHSATMVKAGLYLVARMTPIFAVSQGWIWT---VTAVGLITLFWAS 288 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIF-------------AALLHILNHS 348 Q+D+K +LA+S+V +G++ LG+G F AA+ H++NH+ Sbjct: 289 LNATKQQDLKGILAFSTVSQLGMIMAMLGVGAVSFHFEGAESQIYIAAFTAAIFHLINHA 348 Query: 349 LAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 K LF +G V GTRD+ + G+L IMP + + +L++AG+PPFN FLS+ Sbjct: 349 TFKGALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITLITSLSMAGIPPFNGFLSK 406 >UniRef50_Q1QZ48 NADH dehydrogenase (Quinone) n=15 Tax=cellular organisms RepID=Q1QZ48_CHRSD Length = 932 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 99/319 (31%), Positives = 166/319 (52%), Gaps = 15/319 (4%) Query: 97 YMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY 156 Y RH ++ + P +Y F LF+ ML +V ++NLI++W E T+LSS L+G + Sbjct: 95 YARHYLSTADSMP----RFYAFLMLFMAAMLGIVMADNLILLWMFWELTSLSSFLLIGFW 150 Query: 157 GQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPT 216 +S+ + + T L +++ + + + +LD Sbjct: 151 NHQSAARKGARMALAVTGMGGLALLAGLILIGQIVGTFDMQTV------LDSRDVILDDP 204 Query: 217 LMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYII 275 L A + +L+G TK+ FP WLP A + AP+PVSA L SA ++ + +L R + Sbjct: 205 RYLPALLLILLGAFTKSAQFPFQFWLPQAMA-APTPVSAFLHSATMVKAGVFLLARLHPA 263 Query: 276 ICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPL 335 + GS L+ + G++++ A+F L++ D+K +LAYS+V ++GL+ + G+ + Sbjct: 264 LA---GSQEWLYLVSLTGLVTMLYGAYFALIKLDLKAILAYSTVSHLGLITMLFGLDSRM 320 Query: 336 GIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALA 395 + A L HILNH+ K LF +G V + GTRD+ + G+ + MP T L A ++A Sbjct: 321 AVVAGLFHILNHATFKAALFMTAGIVDHECGTRDIRKLKGLWRYMPMTTALAAITAASMA 380 Query: 396 GMPPFNIFLSEFMTITAGL 414 G+P FN FLS+ M + L Sbjct: 381 GVPLFNGFLSKEMMLAETL 399 >UniRef50_B8CXD7 NADH dehydrogenase I subunit L n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXD7_HALOH Length = 506 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 104/353 (29%), Positives = 168/353 (47%), Gaps = 20/353 (5%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 G+ + +DGLG F ++ + FL +YSIG++ H YY L M Sbjct: 74 GINIAVDGLGLFFTILINIAMFLIILYSIGFIGHHEG----------KYYVLLFLLFAAM 123 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLV 186 VV + ++ + IE T++SA LV EA KY+I + G V++ Sbjct: 124 QGVVLTGDIFNQYVFIELITVASAPLVAFTRTEKGTEAGIKYLIYGIISGLLFFIGIVII 183 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 Y ++ MAI ++ K L + + F+ L+ K G+FP H WL AH Sbjct: 184 YQTTGAL----NMAIV-ADRFKHIPLTTRNFIKVIFLTSLL---IKLGVFPFHFWLAKAH 235 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILV 306 S PS +SALLS +LL + V IR + + D +++ ++S + F L Sbjct: 236 SACPSSISALLSGLLLKVYIYVFIRLFWTVFGINQGDKLLPVIIYMALVSSLLGHIFALQ 295 Query: 307 QRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG 366 + DIKR+LA+SS+ + G++ L +G G++ L+H+++H K LF G G +L Sbjct: 296 EEDIKRVLAFSSIAHTGIIIGSLFLGSISGVYGGLIHVISHLTMKITLFLGVGYLLKFTS 355 Query: 367 TRDLNVVCGMLKIM-PFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH 418 + + G+ I P T +F G LA+ G+PP N F ++ + A L + H Sbjct: 356 EHRIKKLKGIAYINPPVTLSIFTAG-LAMIGIPPLNGFYGKWFILKAFLEKGH 407 >UniRef50_B2IHV5 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=cellular organisms RepID=B2IHV5_BEII9 Length = 666 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 115/356 (32%), Positives = 173/356 (48%), Gaps = 26/356 (7%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L ID L + L ++ + L +YSIGYM + + ++ + F FTML + Sbjct: 77 LRIDTLTAVMLVVVTTVSALVHLYSIGYMHEDPSRSR--------FFAYLSFFTFTMLTL 128 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 VT++NL+ M+ E L+S L+G Y + S+ AA K + VG L G LV+ Sbjct: 129 VTADNLVQMFFGWEGVGLASYLLIGFWYEKPSACAAAIKAFVANRVGDFGFLLGIFLVFL 188 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLL--DPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 SV A S K + D M + + L +G K+ F +H WLPDA Sbjct: 189 LTHSVSFDQVFAAAPSLAGKSLHVFGHDFDAMTITCLLLFMGAMGKSAQFLLHTWLPDA- 247 Query: 247 SEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRL--LLIFGMLSVAVAAFF 303 E P+PVSAL+ +A ++ + ++ R + QA P L + I G + AA Sbjct: 248 MEGPTPVSALIHAATMVTAGVFMVARLSPLFEQA-----PVALSFVTIIGATTAFFAATV 302 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIGG-PLGIFAALLHILNHSLAKTLLFCGSGNVL 362 LVQ DIKR++AYS+ +G + V LG+GG LGIF H+ H+ K LLF G+G+V+ Sbjct: 303 GLVQNDIKRVIAYSTCSQLGYMFVALGVGGYSLGIF----HLFTHAFFKALLFLGAGSVI 358 Query: 363 LK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 + +D+ + + +PFT + G LAL G P + S+ I A A Sbjct: 359 HAMHHEQDMRKMGALRDRIPFTFWMMTLGTLALTGFPLTAGYFSKDAIIEAAFASE 414 >UniRef50_Q8RDB8 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit n=5 Tax=Thermoanaerobacterales RepID=Q8RDB8_THETN Length = 628 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 104/338 (30%), Positives = 174/338 (51%), Gaps = 18/338 (5%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 +D L + I+ ++G L +Y+ YM H H +SP ++ +FL M +V Sbjct: 122 VDELAIIMNLIISIVGSLIALYAFSYMDHHEEHLHVSPTRQPRFFAIILVFLGAMNGLVL 181 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAA 191 SNNL+ M+ E TTLSS L+G ++ A + + I +G L G + +YAN + Sbjct: 182 SNNLMWMYFFWEVTTLSSFLLIGHDQTEEAIRNAARALWINMMGGFALLLGIIFIYANYS 241 Query: 192 SVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPS 251 + I EVLK + + + +LL F+ TK+ P +WL A AP+ Sbjct: 242 T--------ISLVEVLK---IQNASYILLPMFFIAFAAFTKSAQMPFQSWLLGAMV-APT 289 Query: 252 PVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDI 310 PVSALL S+ ++ + +L+R+ + + SDF + ++G + AF + Q + Sbjct: 290 PVSALLHSSTMVKAGIYILLRFSPLFRGTLLSDF----IAVYGAFTFLATAFLAVSQSNA 345 Query: 311 KRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDL 370 KR+LAYS+V N+GL+ +GI I AA+L ++ H+++K LLF G + G+RD+ Sbjct: 346 KRILAYSTVSNLGLMIASIGINTSSAIAAAILLLIFHAISKALLFLSVGTIEQHIGSRDI 405 Query: 371 NVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 + G++ MP T + G L L PF + +S+++ Sbjct: 406 EDMKGLINKMPVTTSITFVGILTLMA-APFGMLVSKWL 442 >UniRef50_C7P4L7 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7P4L7_HALMD Length = 522 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 90/304 (29%), Positives = 149/304 (49%), Gaps = 11/304 (3%) Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIIC 172 +YG L +++ V ++ + + E + L+G++G AA K+ + Sbjct: 118 SQFYGLMLLMEVSLIGVFSALDFFFWFVFWEGVLIPMYLLIGVWGGPRRKYAAIKFFVYT 177 Query: 173 TVG--VAF-GLFGTVLVYANAASVM--PQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLI 227 V V F G F V ++ + + P+ A+ E+ + + L LLAFV + + Sbjct: 178 NVASLVMFVGFFALVFSLGDSIATLGLPEITQALVAGEMGSLAGIAVADLKLLAFVLMFV 237 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD---- 283 GF K +FP+H WLPDAH EAP+PVS +L+ VLL L+R+ + + + Sbjct: 238 GFAVKVPVFPLHTWLPDAHVEAPTPVSVMLAGVLLKMGTYALLRFNFTMLSDVATGSVLA 297 Query: 284 -FPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALL 342 P + +I G+ SV A L QRD+KR++AYSS+ +MG V + L P G+ A Sbjct: 298 IMPVAIAVI-GVFSVIYGALLALAQRDLKRIVAYSSISSMGYVILGLVAFTPHGMGGATF 356 Query: 343 HILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNI 402 +++H L L+F G + + TR + + G+ MP+T +F A G+P + Sbjct: 357 QMISHGLISGLMFMAVGVIYNETHTRMVGDMSGLADRMPWTVGIFVSAAFGYMGLPLMSG 416 Query: 403 FLSE 406 F +E Sbjct: 417 FAAE 420 >UniRef50_A4SFL3 NADH dehydrogenase (Quinone) n=6 Tax=Bacteria RepID=A4SFL3_PROVI Length = 506 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 106/401 (26%), Positives = 182/401 (45%), Gaps = 33/401 (8%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 G+ + +D + LA+ +IG T IYSIG + + H P+ G FL Sbjct: 69 GITMVVDTFSCIMLAMASLIGLTTAIYSIGSVDEKQEHNFYHPLIQLLLMGINGAFL--- 125 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKY---------IIICTVGVA 177 + ++ ++ E +SS L+ + G+ E A KY I + VG+ Sbjct: 126 -----TGDIFNLYVWFEVMLISSFVLLVLEGRPEQFEGAIKYVTLNLLSSAIFLAAVGIL 180 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 +G+ GT L A+ A +P E L+ +A V LI FG K +FP Sbjct: 181 YGMAGT-LNMADLAMRLPMLE---------------HRELLSVAAVLFLITFGIKAAVFP 224 Query: 238 MHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSV 297 + WLP ++ VSA+ + +L + +IR++ I + F + +LL ++ Sbjct: 225 LFFWLPASYHTPHVAVSAIFAGLLTKVGVYAIIRFFTTIFTLESTPFIHHILLWVSAFTM 284 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 + Q D+++LL++ + +G + + I PL I LL I+++ AKT LF Sbjct: 285 VTGVLGAVAQYDLRKLLSFHIISQIGYMIFAIAIQSPLAIAGGLLFIVHNIAAKTNLFYL 344 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 SG + L G+ +L + G+ P +LF ALALAG+PP + F ++ I AGL Sbjct: 345 SGIIQLLSGSWNLRQIGGLYATYPLLGLLFLVPALALAGIPPLSGFWAKLTVIQAGLEAQ 404 Query: 418 HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLG 458 L + + L++ L L ++++ + P + + G G Sbjct: 405 QWLAVSVALMVSILTLYSMIKIWNEAFLKDNPLSGDEGQRG 445 >UniRef50_B0R3U9 NADH dehydrogenase-like complex subunit L n=9 Tax=Halobacteriaceae RepID=B0R3U9_HALS3 Length = 692 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 130/444 (29%), Positives = 206/444 (46%), Gaps = 57/444 (12%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 +D L + L I+ ++ FL ++S+GYM E G L YY LF F+ML V Sbjct: 87 VDPLAAMMLVIVSLVAFLVHVFSLGYMNDEGEGG------LHRYYAGLGLFTFSMLAFVV 140 Query: 132 SNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA-- 188 ++NL++ + E L S L+G + Q+ AA K ++ G F L G V V+A Sbjct: 141 ADNLLMAFMFFELVGLCSYLLIGFHFRQQGPPSAAKKAFLVTRFGDYFFLIGVVAVFATF 200 Query: 189 ---------NAASVMPQ-AEMAI--------------FWSEVLKQSSLLDPTLMLLAFVF 224 A P AE A+ + +V+ S+ +++ L + Sbjct: 201 GTARFVATGEGAHAFPHMAEQALAAVGGEGTMPAHVAHFLDVVGMSAQQWFSVVGLLVLG 260 Query: 225 LLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLI-RYYIIICQAIGSD 283 +IG K+ FP+H WLPDA E P+PVSAL+ A + A + L+ R Y Sbjct: 261 GVIG---KSAQFPLHTWLPDA-MEGPTPVSALIHAATMVAAGVYLVARMYGFYAL----- 311 Query: 284 FPNRLLLI--FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAAL 341 P L +I G + AA +V+ ++K++LAYS++ G + + LG GG + AA Sbjct: 312 LPTVLAIIALVGGFTALFAATMGVVKDELKQVLAYSTISQYGYMMLGLGTGGYI---AAS 368 Query: 342 LHILNHSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 H+L H+ K LLF G+G+V++ + ++ + G+ K MP T F G+LALAG+ PF Sbjct: 369 FHLLTHAFFKALLFLGAGSVIIAMHHNENMWDMGGLRKKMPVTYYTFLSGSLALAGIVPF 428 Query: 401 NIFLSE----FMTITAGLARNHLLIIVLLLLLLTLVLAGLV--RMAARVLMAKPPQAVNR 454 F S+ + + G + +L+ + LL + G RM +P Sbjct: 429 AGFWSKDEILYEALIYGAGDSPILLAAYAMGLLAVFFTGFYTFRMVVLTFHGEPRSDTAE 488 Query: 455 GDLG--WLTTSPMVILLVMMLAMG 476 G W P+V+L V+ +G Sbjct: 489 DPHGVRWNVKFPLVVLGVLAATVG 512 >UniRef50_C1TKY1 Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKY1_9BACT Length = 487 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 125/350 (35%), Positives = 186/350 (53%), Gaps = 26/350 (7%) Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 G+ L +D + G FL LG IGF + ++ R LSP +Y F L ++ Sbjct: 66 GISLVVDRISGTFLT-LGAIGFPLSL-AVSTERFG-----LSP---WRFYVIFFLSWASV 115 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS--SLEAAWKYIIICTVGVAFGLFGTV 184 ++ + +L ++ E +++ A+L+ Y RS ++EA+ KY+I+ TVG F L G Sbjct: 116 NGILLTGDLFNLFVFFEIFSVA-AYLMVSYPPRSWRAVEASLKYLILGTVGALFLLLG-- 172 Query: 185 LVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 + Y+ A+ Q MA S VL S+ TL ++A + G K+G P H WLPD Sbjct: 173 IAYSFMAT--GQLNMAAL-SLVLP--SVPSATLAVIAGC-IFTGLFVKSGTVPTHFWLPD 226 Query: 245 AHSEAPSPVSALLSAVLLNCALLVLIR--YYIIICQAIGSDFPNRLLLIFGMLSVAVAAF 302 AHS A + VSALLS VL+ +L +IR Y + + IG ++ FG LSV + Sbjct: 227 AHSSAQTSVSALLSGVLVKVSLYGMIRLSYLLFMDAGIGI---MPVMTAFGTLSVILGHL 283 Query: 303 FILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVL 362 Q D+KRLLAYS+V +G V V +G G LGI AA+LH H +K LF SG ++ Sbjct: 284 MAFQQEDVKRLLAYSTVAQVGTVLVGIGCGSALGISAAILHSFVHMASKMGLFLVSGVLV 343 Query: 363 LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 GTR++ + G+ P +LF A +LAG+PPF+ F S++ + A Sbjct: 344 EDRGTREIAEMRGLFFHRPLFVLLFCFLAASLAGVPPFSGFFSKWYLLRA 393 >UniRef50_A8LTG8 NADH dehydrogenase (Quinone) n=58 Tax=Proteobacteria RepID=A8LTG8_DINSH Length = 969 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 116/395 (29%), Positives = 197/395 (49%), Gaps = 34/395 (8%) Query: 25 RKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGL-WL---------HIDG 74 R R + V +L +LLIL+ V++ GE+ A + WL +DG Sbjct: 27 RAGRTACASFTAVPTALAFIMLLILSPAVLR-----GEVITAEIGWLPQLGLSASFFLDG 81 Query: 75 LGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNN 134 LG LF ++ +G L +Y+ Y+ + G+ +Y + LF ML +V S+N Sbjct: 82 LGLLFALMITGVGLLIILYARFYLSGDDPMGQ--------FYTYLLLFQGAMLGIVLSDN 133 Query: 135 LIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVM 194 ++++ E T+LSS L+G + + + T + G +L+ N Sbjct: 134 ILLLLIFWELTSLSSFLLIGYWKHLPEGRQGARMALAVTGAGGLAMIGGMLILGNIVGSY 193 Query: 195 PQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVS 254 ++ + E ++ S P L+L+ L+G TK+ FP H WLP A + AP+PVS Sbjct: 194 NLTDI-LQAGEQIRASEWYLPALILI-----LLGAFTKSAQFPFHFWLPHAMA-APTPVS 246 Query: 255 ALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRL 313 A L SA ++ + ++ R + ++ G+D ++ G++++ + A L + D+K L Sbjct: 247 AYLHSATMVKAGVFLMARMWPVLA---GTDAWFYIVATTGLVTMVMGAGIALFKDDLKAL 303 Query: 314 LAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVV 373 LA+S+V ++GL+ + LG G AA+ HI+NH K LF +G V + TRD+ + Sbjct: 304 LAFSTVSHLGLLTMLLGFGTQAAAVAAVFHIINHLTFKAALFMTAGIVDHETHTRDIKRL 363 Query: 374 CGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 G+ +MP T + AL++AG+P FN FLS+ M Sbjct: 364 GGLRHLMPITFAIGTVAALSMAGIPLFNGFLSKEM 398 >UniRef50_B1WQD4 NADH dehydrogenase subunit 5 n=9 Tax=Cyanobacteria RepID=B1WQD4_CYAA5 Length = 682 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 119/413 (28%), Positives = 200/413 (48%), Gaps = 46/413 (11%) Query: 19 LLCFACRKRRLSATRTVTVLHSLGITLLLILAL-WVV----QTAADAGEIFAAG-----L 68 L+ F RL V ++ LG +++L AL W +T E AAG + Sbjct: 26 LISFNQVTNRLRQANAVFIISLLGASMVLSFALLWSQIQGHETYTRMIEWAAAGNFHLQM 85 Query: 69 WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLL 128 +D L L I+ + FL +Y+ GYM H+ + +Y + +F +ML Sbjct: 86 GYTLDHLSALMCVIVTTVAFLVMVYTDGYMAHDPGY--------VRFYAYLSIFSASMLG 137 Query: 129 VVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLF-GTVLV 186 +V S NL+ ++ E + S L+G + ++++ +A K + VG FGL G + + Sbjct: 138 LVISPNLVQVYIFWELVGMCSYLLIGFWFDRKAAADACQKAFVTNRVG-DFGLLLGMLGI 196 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 Y + + ++ E L S ++ P L L V + +G K+ FP+H WLPDA Sbjct: 197 YWATGTF--EFDLMGERLESLVSSGMIAPALAGLFAVLVFLGPVAKSAQFPLHVWLPDA- 253 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLI--FGMLSVAVAAFFI 304 E P+P+SAL+ A + A + L+ + + I P + +I G ++ + A Sbjct: 254 MEGPTPISALIHAATMVAAGVFLVARMYPVFEPI----PTAMTIIAWTGAVTSFLGATIA 309 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK 364 L Q DIK+ LAYS++ +G + + +GIG A L H++ H+ K +LF SG+V+ Sbjct: 310 LTQNDIKKGLAYSTISQLGYMVMAMGIG---AYTAGLFHLMTHAYFKAMLFLCSGSVI-- 364 Query: 365 YG-----------TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 +G +D+ ++ G+ K MP T++ F G LA+ G+PPF F S+ Sbjct: 365 HGMEGVVGHDPVLAQDMRLMGGLRKYMPLTSLAFLVGTLAICGIPPFAGFWSK 417 >UniRef50_B3QY40 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QY40_CHLT3 Length = 772 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 98/338 (28%), Positives = 167/338 (49%), Gaps = 24/338 (7%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 ID L + L ++ +I FL I+S+GYM + +G YY + +F F+ML +V Sbjct: 93 IDNLTAIMLVVVTLISFLVHIFSMGYMAGDKYYGR--------YYAYLGIFTFSMLGIVL 144 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAA 191 S+NL ++ E LSS L+G + ++ S A K + G++ +L+ + Sbjct: 145 SDNLFSIYIFWELVGLSSYLLIGFFFEKDSAADAQKKAFLTNRVGDIGMWLGILILYSQF 204 Query: 192 SVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPS 251 E+ + + + L + + L +G K+ FP+H WLPDA E P+ Sbjct: 205 HTFGYEEI---YQNIQDGNFTLSEAWLTAGGLLLFMGCVGKSAQFPLHIWLPDA-MEGPT 260 Query: 252 PVSALLSAVLLNCALLVLIR--YYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRD 309 PVSAL+ A + A + + + I+ A+ ++ G + +AA + Q D Sbjct: 261 PVSALIHAATMVAAGVYFVARIFPILSVDAL------HVIAFIGAFTAFMAATIAITQHD 314 Query: 310 IKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVL-LKYGTR 368 IKR+LAYS++ +G + + +GIG A H++ H+ K LF GSG V+ + + Sbjct: 315 IKRVLAYSTLSQLGYMVMGMGIGAYA---PAFFHLVTHAFFKACLFLGSGAVIHATHHEQ 371 Query: 369 DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 D+ + G+ K MP+T F LAL+G+P + F+S+ Sbjct: 372 DMRWMGGLRKNMPWTFATFTIAMLALSGLPMTSGFMSK 409 >UniRef50_Q1AVJ0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ0_RUBXD Length = 656 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 117/421 (27%), Positives = 204/421 (48%), Gaps = 34/421 (8%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 ++ID L + L ++ + + +YS G+M + YY +LF +ML + Sbjct: 83 VYIDELAAVMLVVVSFVSLMIQLYSGGFMAGDR--------RFAWYYAVLNLFTASMLGL 134 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 V + N I ++ E L S L+G + ++ ++ +AA K I+ +G A G ++ + Sbjct: 135 VVAPNFIELYICWELVGLCSYLLIGHWFEKPAARDAALKAFIVTRIGDAALFVGIIMFWR 194 Query: 189 NAASVMPQ--AEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 + + AE A Q+ + +L+ A V + +G K+ FP+H WLPDA Sbjct: 195 ATGTTAFEGIAEAA--------QAGFIGGSLLTAAVVLVFVGAIGKSAQFPLHVWLPDAM 246 Query: 247 SEAPSPVSALLSAVLLNCALLVLI-RYYIIICQAIGSDFPNRLLLI--FGMLSVAVAAFF 303 E P+PVSAL+ A + A + L+ R Y I Q+ P +L++ G + +AA Sbjct: 247 -EGPTPVSALIHAATMVAAGVYLVARTYDIFVQS-----PTAMLIVAYIGAFTAFMAATM 300 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLL 363 LV++DIKR++AYS+V +G + + LG+G A + H+ NH+ K LLF +G+++ Sbjct: 301 ALVKKDIKRVIAYSTVSQLGYMMLGLGVG---AFSAGMFHLYNHAFFKALLFLCAGSIIH 357 Query: 364 KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIV 423 + +L + G+ + MP T L+LAG+ P F S+ I + ++ ++ Sbjct: 358 AMDSYNLFEMGGLRRRMPLTFWTMVIAGLSLAGIFPLAGFWSKDAIIASAFEEHYYVLYA 417 Query: 424 LLLLLLTLVLAGLVRMAARVLMAKP--PQAVNRGDLGWLTTSPMVILLVMMLAMG-THIP 480 L + + L + R +P A + + T PMVIL V+ +A G IP Sbjct: 418 LAIGTVFLTAFYIFRAIFLAFTGEPRTEGAARAVESPGVMTVPMVILAVLSVASGWVGIP 477 Query: 481 Q 481 + Sbjct: 478 E 478 >UniRef50_B1ZRS2 Proton-translocating NADH-quinone oxidoreductase, chain L n=3 Tax=Verrucomicrobia RepID=B1ZRS2_OPITP Length = 622 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 122/428 (28%), Positives = 197/428 (46%), Gaps = 53/428 (12%) Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 F+ L D L L L ++GV+GF ++S GYMR + A Y+G +F+ Sbjct: 69 FSFPLGFKFDDLAALMLFVVGVVGFFIHVFSFGYMREDTAKAR--------YFGGLSIFM 120 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFG-LFG 182 F+M+ + ++NL +M+ E SS L+G + +R S AA K I FG L G Sbjct: 121 FSMIGITVADNLFMMFVFWELVGFSSWLLIGHWHERPSASAAAKKAFIVNRVGDFGFLLG 180 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 + Y +V L + + P LL + L G K+ P+ WL Sbjct: 181 IAMCYWVHGTV------------TLSELDGVQPVGALLP-LLLFCGAVGKSAQMPLQVWL 227 Query: 243 PDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF--GMLSVAV 299 PDA E P+PVSAL+ +A ++ + +L R +++ P L +I G + Sbjct: 228 PDA-MEGPTPVSALIHAATMVAAGIYMLCRINVLMV-------PEALTVIMWVGTATALY 279 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGG----------------PLGIFAALLH 343 AA +VQ DIK++LAYS++ +G + G+G G+ AA+ H Sbjct: 280 AALCAIVQSDIKKVLAYSTLSQLGYMVAAFGLGSLAERHEMGGAVHEIVIAAGVGAAMFH 339 Query: 344 ILNHSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNI 402 ++ H+ K LLF GSG+V+ + +D+ + G++K MP T F G LA+ GMP Sbjct: 340 LVTHAFFKALLFLGSGSVIHGCHHEQDIFKMGGLVKRMPVTFATFTIGVLAIIGMPGLAG 399 Query: 403 FLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP--PQAVNRGDLGWL 460 F S+ + +N + +VL + L +VR+ P A + + G + Sbjct: 400 FFSKDAILLLAYQKNAAVFVVLAFTAI-LTACYMVRVWKITFFGAPRSEHAEHAHESGSV 458 Query: 461 TTSPMVIL 468 T P+++L Sbjct: 459 LTMPLIVL 466 >UniRef50_Q9V0S9 NuoM NADH dehydrogenase I, subunit M n=3 Tax=Pyrococcus RepID=Q9V0S9_PYRAB Length = 618 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 97/340 (28%), Positives = 159/340 (46%), Gaps = 22/340 (6%) Query: 129 VVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 + T+ +L+V + E T +S +V + + +SL KY ++ +G L L+YA Sbjct: 114 IFTAQDLVVFFIFWEIMTFASFMMVLKFNRAASL----KYFLLSIMGAYAMLVAIGLIYA 169 Query: 189 NAASVMPQAEMAIFWSEVLKQS-------SLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 S A F E + S LD L+ L F L+ FG K G+FP+H W Sbjct: 170 KTGSFSFSDISAFFGKEAVSTMLGGTPAFSKLDVALIYLLF---LLAFGVKAGMFPLHVW 226 Query: 242 LPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPN--------RLLLIFG 293 PDA+SE +A+ S VL + I YI++ + D ++ G Sbjct: 227 APDAYSETDQSYTAIFSGVLSKAGVYGFILLYILMYGKLLIDLGQVRSAPAFGYVIAFLG 286 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 L++ V +Q DI+RL AYSS+ +G + V LGIG LGI AA+ H ++H+L K L Sbjct: 287 GLTIIVGGILAALQEDIRRLFAYSSISQVGYILVGLGIGTSLGIEAAIYHAISHALFKGL 346 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 F ++ + G + G+ + MPFT + L+LAG+PP F S+++ A Sbjct: 347 FFLIVATLIYRTGKTEFKDFGGLAEKMPFTFTMAFIAILSLAGIPPLVGFASKWLIFEAV 406 Query: 414 LARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVN 453 +++N ++ ++ + L+R V + P + Sbjct: 407 ISQNLPILGGMVFFGSAIGFVYLIRFTYAVWFGQRPSDIE 446 >UniRef50_Q5FC98 NADH-quinone oxidoreductase chain L n=18 Tax=Rickettsiales RepID=Q5FC98_EHRRW Length = 641 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 105/353 (29%), Positives = 177/353 (50%), Gaps = 27/353 (7%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L++D L + L I+ + + IYSIGYM H+V + + LF F ML++ Sbjct: 92 LYLDSLSIIMLVIVNTVSVVVHIYSIGYMSHDVGAAR--------FLSYLSLFTFFMLIL 143 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVAFGLFGTVLVYA 188 VTS N + ++ E L S L+G + ++SS +AA K II VG F + G + V+ Sbjct: 144 VTSGNFLQLFLGWEGVGLCSYLLIGFWFEKSSATKAAMKAFIINRVGDFFFILGIIAVFL 203 Query: 189 -----NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLP 243 + A V + + ++ P + ++ V L IG K+ +H WLP Sbjct: 204 VFDSLDFARVFHSIVNSDYRIGIINFFGYQVPYIDVIC-VLLFIGCMGKSAQIGLHTWLP 262 Query: 244 DAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIG--SDFPNRLLLIFGMLSVAVA 300 DA E P+P SAL+ +A ++ + +++R C + SD +LI G ++ A Sbjct: 263 DA-MEGPTPASALIHAATMVTAGVFLVVR-----CSPLFELSDVARHFILIVGTITCLFA 316 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 A +VQ D+K+++AYS+ +G + + G+ A+ H++ H+ K LLF +GN Sbjct: 317 ATIAIVQTDLKKIIAYSTCSQLGYMFLACGLSAYS---VAIFHLMTHAFFKALLFLCAGN 373 Query: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 ++ +D+ + + +PFT VL G+LALAG+ PF F S+ + I + Sbjct: 374 IIHSTHEQDIYKIRASWRQIPFTYVLTWIGSLALAGIFPFAGFYSKDLIIESS 426 >UniRef50_B9LUW7 NADH/Ubiquinone/plastoquinone (Complex I) n=13 Tax=cellular organisms RepID=B9LUW7_HALLT Length = 698 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 116/384 (30%), Positives = 184/384 (47%), Gaps = 30/384 (7%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L D LG LF + + +T YSIGYMR V Y+ F + L + + Sbjct: 79 LRADALGMLFAFLASGLWIVTSFYSIGYMRGN------DEVNQTRYFAAFAVSLSATMGI 132 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 + NL+ ++ E ++++ LV + A KY+ G G VLV A Sbjct: 133 AFAGNLVTIFVFYELLSIATYPLVAHDETDEARAAGRKYLAYTMFG------GGVLVLAG 186 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 A V A F + +++ + DP L +LAF L IGFG K G+ P+H WLP+A A Sbjct: 187 TALVYLIAGNVSFTAGGIEELANADPGLAMLAFFLLAIGFGVKAGIMPLHQWLPEAMV-A 245 Query: 250 PSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM-----------LSV 297 P+PVS LL AV ++ + R ++ G + L L FG +++ Sbjct: 246 PTPVSGLLHAVAVVKSGAFGVSR---VVLDVFGPELVFDLSLPFGFSAGLVLSTIGAITL 302 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAK-TLLFC 356 A+ L + +K+ LAYS+V + + + LG+ G G+ ALLHI H+ K TL FC Sbjct: 303 TAASIIALRKDHLKQRLAYSTVSQLSYIILGLGLFGWYGLVGALLHIPAHAFMKLTLFFC 362 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 +GN+ + T ++ + G+ K MP T F +L +AG+P F+S++ + G+ Sbjct: 363 -AGNLHVSTHTDYISEMAGIGKRMPLTMGAFTVASLGMAGIPLLAGFVSKYYMLIGGIRM 421 Query: 417 NHLLIIVLLLLLLTLVLAGLVRMA 440 L V L+ L+L+G++ +A Sbjct: 422 GAQLTPVAYYLVGALLLSGVLNIA 445 >UniRef50_Q9K1B0 NADH-quinone oxidoreductase subunit L n=127 Tax=Proteobacteria RepID=NUOL_NEIMB Length = 674 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 102/353 (28%), Positives = 172/353 (48%), Gaps = 31/353 (8%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 +D + + + ++ + + IY+IGYM E V ++ + LF F+ML+++ Sbjct: 84 VDTMTAMMMVVVTGVSLMVHIYTIGYMHDE-------KVGYQRFFSYISLFTFSMLMLIM 136 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVGVAFGL---------- 180 SNN I ++ EA L S L+G Y +R S A K +I VG FG Sbjct: 137 SNNFIQLFFGWEAVGLVSYLLIGFYFKRPSATFANLKAFLINRVG-DFGFLLGIGLVLAY 195 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 FG L Y + + +P + A + SL+ T +L L +G K+ FP+H Sbjct: 196 FGGSLRYQDVFAYLPNVQNATIQLFPGVEWSLITVTCLL-----LFVGAMGKSAQFPLHV 250 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 WLPD+ E P+P+SAL+ A + A L ++ I + S ++++ G ++ Sbjct: 251 WLPDS-MEGPTPISALIHAATMVTAGLFMVSRMSPIYEM--SSTALSVIMVIGAITALFM 307 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 F ++Q DIKR++AYS++ +G + V LG A+ H++ H+ K LLF +G+ Sbjct: 308 GFLGVIQNDIKRVVAYSTLSQLGYMTVALGAS---AYSVAMFHVMTHAFFKALLFLAAGS 364 Query: 361 VLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 ++ + +D+ + + K MP T + G L+L G P F+ F S+ I A Sbjct: 365 AIIGMHHDQDMRHMGNLKKYMPVTWLTMLIGNLSLIGTPFFSGFYSKDSIIEA 417 >UniRef50_B8D5B8 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5B8_DESK1 Length = 520 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 98/313 (31%), Positives = 160/313 (51%), Gaps = 18/313 (5%) Query: 129 VVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVAFGLFGTVLVY 187 V+ ++++ ++ +E T +SS LV Y R+ + + KY + +G L ++Y Sbjct: 127 VIMTSDVFNLFVMLEVTGVSSYGLVMYYRHRAGPIVSGIKYAFVGAMGTTLYLLALAIIY 186 Query: 188 ANAASV----MPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLP 243 S+ + S + + D + L F K+G+FP H WLP Sbjct: 187 NVYGSLNLIDLSLKTHGYRGSSITYMGTGYDAVSIGLIMAISFWTFSIKSGVFPNHFWLP 246 Query: 244 DAHSEAPSPVSALLSAVLLNCALLVLIR--YYIIICQAIGSDFPNR-----LLLIFGMLS 296 DAH APSPVSA+LS +++N + L + Y I + S P R L+++ G S Sbjct: 247 DAHPAAPSPVSAMLSGLVVNTGAVGLYKILYLIYGGSILDSLTPARDAISFLIVLTGAFS 306 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + A + +Q D+KR++AYS+V N G + + +GI P GI A L + + HSLAK+ LF Sbjct: 307 AIIGALLMNIQEDVKRMIAYSTVMNTGYIFMGIGILSPFGILAFLYYTVVHSLAKSTLFL 366 Query: 357 GSGNVLLKY-GTRDLNVVCGMLK--IMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 +G +L+KY G+R +N + G K I+P A + L L+G+PP FL + + A Sbjct: 367 STG-LLIKYTGSRRINELAGSFKTHIIPGVASVI--SLLTLSGIPPLPGFLGKLLLYNAL 423 Query: 414 LARNHLLIIVLLL 426 + N + IV+L+ Sbjct: 424 FSYNPVFAIVMLI 436 >UniRef50_B2KDU4 NADH dehydrogenase (Quinone) n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDU4_ELUMP Length = 470 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 115/400 (28%), Positives = 188/400 (47%), Gaps = 28/400 (7%) Query: 93 YSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFL 152 YS GY+ + E YY LFL +M+ +V S NL+ + E T + S L Sbjct: 91 YSTGYIHDKDYENE--------YYTMVILFLGSMMGLVFSFNLVWTFVFWELTAICSWRL 142 Query: 153 VGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSL 212 VG + + + A K +I G F L G +Y F + + + L Sbjct: 143 VGFFRGDTDKKKAVKTFLITVFGALFLLLGIAALY--------------FTNGTVDLTLL 188 Query: 213 LDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIR 271 + L+ L+ G +K+ + P WLPDA APSPV+ALL +AVL+ + V R Sbjct: 189 KGSRVPLIVCALLVAGMFSKSAILPFSTWLPDA-GVAPSPVTALLHAAVLVKIGVYVFAR 247 Query: 272 YYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGI 331 + + + + + LI G+ S+ +A + + +IKR++AYS++ +G + + L Sbjct: 248 VFYTV--NLDPSLGHAVALIAGVSSL-IAGGAAVTETNIKRIIAYSTISQLGFIFLALST 304 Query: 332 GGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGA 391 LG+ A +L I+ H AK LF +G + K T+D+ + G+ K+MP T ++F A Sbjct: 305 RTALGLVAGMLFIMMHGAAKGGLFLCAGIIEHKTHTKDITKMGGLFKVMPLTGLVFAICA 364 Query: 392 LALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA 451 L++ G+PP F S+FM + A +L+ + +L A L+R+ V + P Sbjct: 365 LSVMGIPPMGGFFSKFMVFKSASAAGGVLVFAIFILAACFTAAYLLRVFHIVFLGSPGVE 424 Query: 452 VNRGDLGWLTTSPMV-ILLVMMLAMGTHIPQPVIRILAGA 490 G G T V IL V+ + M + PV ++ A Sbjct: 425 WEMGPEGSKQTLISVSILAVLTVVMSVFVALPVNYLIKAA 464 >UniRef50_B9LA03 CooM n=1 Tax=Nautilia profundicola AmH RepID=B9LA03_NAUPA Length = 1161 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 92/279 (32%), Positives = 146/279 (52%), Gaps = 21/279 (7%) Query: 143 EATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIF 202 E T+SS L+ S+ AA Y ++C G + L ++N + ++ Sbjct: 269 ELMTISSYLLIMHSRSDESISAAKLYFVMCIAGA----YLLQLAFSNFYAFGIES----- 319 Query: 203 WSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLL 262 +SEV K SL L++L GFG K G+ PMH WLP AH EAPS +SA LS +L Sbjct: 320 FSEV-KNLSLSTAILLML-------GFGVKAGMVPMHKWLPVAHPEAPSSISAPLSGILT 371 Query: 263 NCALLVLIR-YYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVEN 321 + +I YI A+ + LL+ G++++ L ++D+KRLLAYS++ Sbjct: 372 KAGIFGIIAIVYIFNFHALVFSY---LLIGIGLVTLFYGEIKTLFEKDLKRLLAYSTIGQ 428 Query: 322 MGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMP 381 +G + LG+ + AL HI+NH++ K LLF +G +++ G+R+L+ + G+ K +P Sbjct: 429 IGEIITVLGLMSTAALSGALYHIINHAVVKDLLFLSAGLLIMSAGSRNLDDLKGIGKKLP 488 Query: 382 FTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 A G G A++ PPF F S+F+ I A ++ L Sbjct: 489 ILAFPLGIGIFAISAFPPFGNFNSKFLMIFAATDTHNYL 527 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 94/358 (26%), Positives = 165/358 (46%), Gaps = 41/358 (11%) Query: 161 SLEAAWKYIIICTVGVAFGLFGTVLV-----YANAASVMPQAEMAIFWSEVLKQSSLLDP 215 S+ A KY+I G + G +V Y + +MP IF Sbjct: 737 SITEASKYLIYNFAGAGVIMIGLSIVMHYGSYFDVFEMMPLTSYTIF------------- 783 Query: 216 TLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIR-YYI 274 A L +GF K FP+ AP+P+S +S+V+L +LI +Y+ Sbjct: 784 -----AVALLTVGFLAKAAQFPVRIDYQMHPKPAPTPISGYISSVMLKTGPFMLIMMFYL 838 Query: 275 I-----ICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVEL 329 I + + + D + G++++ + A F L+ +KRLL + +V +G + + Sbjct: 839 IAAGMSLTKMLAIDSIAHFAAVVGVITIIMGASFGLLTNSMKRLLIFLTVAEIGYIVAGV 898 Query: 330 GIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGG 389 + G+ +LH++NH K LLF +G + K G L+ + G+ + MP T +F Sbjct: 899 SLVTSEGLAGGMLHLINHMFFKDLLFLSAGAIFYKTGIDSLDKLGGIARKMPITFAVFMV 958 Query: 390 GALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLL---LLTLVLAGLVRMAARVLMA 446 A AG+P F+ F+S++M A +A+ ++ + +L +L ++ LV + A M Sbjct: 959 AVFATAGVPMFSGFVSKWMIYHALMAKGYVFLAILTILGSVMILLVFVKFMHSAYFGKMD 1018 Query: 447 KPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIP----QPVIRILA--GASTIVLSGT 498 K + + + DL + PM+IL V+ + +G P +P+ IL G +TI +S T Sbjct: 1019 KSFEKIEKVDL--FMSVPMIILAVLNIILGI-FPYLALKPINMILETFGFNTICISAT 1073 >UniRef50_UPI0001C351BA sodium/proton antiporter shaD n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C351BA Length = 502 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 111/429 (25%), Positives = 208/429 (48%), Gaps = 27/429 (6%) Query: 75 LGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNN 134 L GL A+ G++ L+ +G M H A E + + L +Y L L ++L ++ +N+ Sbjct: 79 LEGLTAAVFGIVMLLS---VLGGMDHTAADVEGTKLNL--FYVMIDLMLSSLLALIYTND 133 Query: 135 LIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVM 194 L + +E T++ L+ I + SL AA +Y+I+ +G L G ++Y + + Sbjct: 134 LFTAYVFVEINTIAGCGLIMIRQKGRSLSAAIRYMIMSQLGSGLFLIGLSMLY-DVTGHL 192 Query: 195 PQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVS 254 + + + S P L++LA + +G K+GL+P H W+PD + A S Sbjct: 193 LMSPAKAAVAAIEAAGSYEIPMLVILAVIS--VGLAIKSGLYPFHYWIPDTYGYATPTAS 250 Query: 255 ALLSAVLLNCALLVLIR-YYIIICQA--IGSDFPNRLLLIFGMLSVAVAAFFILVQRDIK 311 A+LS ++ + +LI+ +Y ++ + + S N +L +FG+ + + + ++++D + Sbjct: 251 AVLSGLVSKGYIFLLIKIFYRVLGRENVVASRIVN-VLFVFGLAGMLMGSLHAILEKDTR 309 Query: 312 RLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS-GNVLLKYGTRDL 370 R++AYSSV +G + + +G+G G+ AA+ H+ HS K LLF + G + +D Sbjct: 310 RMIAYSSVAQIGYIYMGIGLGTEAGMVAAVFHMFTHSATKALLFISAVGLYEVSGDKKDY 369 Query: 371 NVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLL----- 425 + G P + F GAL++ G P F+S+ + T+ L + +I+ L+ Sbjct: 370 KSLRGAGYRNPLAGIGFSVGALSMVGFPMLAGFISKLLFATSALQSPNKMIVTLIGLAVS 429 Query: 426 -----LLLLTLVLAGLVRMAARVLM-AKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHI 479 + L LV+ R R AK AV + W +V + + L +G Sbjct: 430 TTLNAIYFLRLVITLYSREGDRETRGAKERSAVRKSS--WKLRLAVVCFIFLNLVLGLK- 486 Query: 480 PQPVIRILA 488 QP+++ +A Sbjct: 487 SQPIVQAIA 495 >UniRef50_Q9I0J1 NADH-quinone oxidoreductase subunit L n=113 Tax=Gammaproteobacteria RepID=NUOL_PSEAE Length = 615 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 125/446 (28%), Positives = 209/446 (46%), Gaps = 35/446 (7%) Query: 49 LALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 L LW A D F+ L++DGL L ++ +GFL +++ YMR E + Sbjct: 64 LVLWQWMAAGD----FSTNFTLYLDGLSVTMLGVVTGVGFLIHLFASWYMRGETGYSR-- 117 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWK 167 ++ + +LF+ +ML +V +NL+ ++ E L S L+G Y R++ AA K Sbjct: 118 ------FFAYTNLFIASMLFLVLGDNLLFLYFGWEGVGLCSYLLIGFYYSNRNNGNAALK 171 Query: 168 YIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLI 227 I+ VG F FG +++ ++ Q E+ + + + +L L + Sbjct: 172 AFIVTRVGDVFMAFGLFILFQQFGTLNIQ-ELLVLAPQKFPEGNLWLTLATLALLGGAV- 229 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPN- 286 K+ P+ WL DA + P+PVSAL+ A + A + Y I C + + P+ Sbjct: 230 ---GKSAQLPLQTWLADAMA-GPTPVSALIHAATMVTAGV----YLIARCHGLFTLAPDI 281 Query: 287 -RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 L+ I G +++ +A F LVQ DIKR+LAYS++ +G + + LG+G AA+ H++ Sbjct: 282 LELVGIVGAVTLVLAGFAALVQTDIKRILAYSTMSQIGYMFLALGVG---AWDAAIFHLM 338 Query: 346 NHSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNI-F 403 H+ K LLF SG V++ + +++ + G+ K +P F G ALA +P F Sbjct: 339 THAFFKALLFLASGAVIVACHHEQNIFKMGGLWKKLPLAYASFVVGGAALAALPFLTAGF 398 Query: 404 LSEFMTITAGLARNH--LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLT 461 S+ + A H LLI L+ LT + + A K G WL Sbjct: 399 YSKDEILWEAFASGHRELLIAGLVGAFLTSIYTFRLIFVAFHGEPKTEAHAGHGISHWL- 457 Query: 462 TSPMVILLVMMLAMGTHIPQPVIRIL 487 P+ +L+V+ +G I P+ +L Sbjct: 458 --PLSVLIVLSTFVGALITPPLAGVL 481 >UniRef50_Q2RTW0 NADH dehydrogenase (Quinone) n=4 Tax=Proteobacteria RepID=Q2RTW0_RHORT Length = 502 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 159/309 (51%), Gaps = 16/309 (5%) Query: 142 IEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAI 201 +E ++LSS LV + R +L AA+ Y+I+ TVG F + G +Y + + ++A Sbjct: 140 LEISSLSSYALVALGRDRRALYAAYHYLILGTVGATFYVIGIGFLYMMTGT-LNMNDLAQ 198 Query: 202 FWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVL 261 V + + VFL +G K LFP+H WLP A+S APS V A L+A Sbjct: 199 RLPAVAHSRTAVA------GVVFLGVGLSLKLALFPLHKWLPAAYSYAPSAVGAFLAATS 252 Query: 262 LNCALLVLIRYYI-IICQAIGSDF------PNRLLLIFGMLSVAVAAFFILVQRDIKRLL 314 A V++R ++ ++ A ++ ++++ + ++ +F + Q D KRLL Sbjct: 253 TKVAFYVMVRLFLGVLAPAFSANLLPGPVSAREMVMVLALAAILSGSFSAIFQSDAKRLL 312 Query: 315 AYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVC 374 AYSSV +G++ + L + G+ L+H+LNH+L K LF G V L+ G+ ++ + Sbjct: 313 AYSSVSQIGVMVLGLSLFSLDGVAGGLVHMLNHALIKASLFMALGCVFLRIGSVEIADMA 372 Query: 375 GMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLL--LLTLV 432 G+ + MP+T F G L+L G+P F+S++ + +A L + L+ LL +V Sbjct: 373 GIGRRMPWTMAAFVIGGLSLIGIPGTAGFISKWQLAQSAIAEGWWLAVAALIASSLLAVV 432 Query: 433 LAGLVRMAA 441 G V AA Sbjct: 433 YVGKVIEAA 441 >UniRef50_D1A433 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Streptosporangineae RepID=D1A433_THECD Length = 698 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 106/341 (31%), Positives = 167/341 (48%), Gaps = 25/341 (7%) Query: 68 LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 L L +DGL L ++ + +YS+ YM + + Y F LF ML Sbjct: 164 LGLRVDGLAALVALMVCGVALAVQLYSVAYMAEDRRY--------SSYAAFISLFTAAML 215 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVAFGLFGTVLV 186 LVV S +L+V++ E + S FL+G + Q R++ AA K +I +G L G ++ Sbjct: 216 LVVYSGDLLVLYVGWEVMGVCSYFLIGHHWQERANSRAAVKAFLITRLGDVGFLIGIFVL 275 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 A + VL++ L + A + LL G K+ FP+H WLPDA Sbjct: 276 GVGAGT--------FSIGGVLERLPDLPQGTVTAATLLLLAGVAGKSAQFPLHTWLPDAM 327 Query: 247 SEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFIL 305 + P+PVSAL+ +A ++ + V+ R Y + + +L + ML A+AA L Sbjct: 328 A-GPTPVSALIHAATMVAAGIYVVARLYAAFAASAAALTVLGVLAVISMLGSALAA---L 383 Query: 306 VQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY 365 Q D+KR+LAYS++ + +A L +G P+ AA+ H++ H K LLF +G+V+ Sbjct: 384 AQDDLKRVLAYSTISQLACMAAGLAVGAPV---AAIFHLVAHGAFKALLFLAAGSVIFVT 440 Query: 366 GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 G+ L G+ + MP T G AL G+PP + F S+ Sbjct: 441 GSGLLRRHGGLRRAMPVTFWAMTIGYAALVGLPPVSGFFSK 481 >UniRef50_Q1NS05 NADH dehydrogenase (Quinone) n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NS05_9DELT Length = 507 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 99/347 (28%), Positives = 172/347 (49%), Gaps = 29/347 (8%) Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYI---------IICTVGVAFGLFG 182 + +L ++ +E +LS+ LV + G+ + AA++Y+ I+ VGV F L G Sbjct: 144 TADLFNLFVFLEVVSLSAYALVAVGGRPVAELAAFRYLLMGAISSLLILLAVGVLFALTG 203 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 + L A+ A +P+ E P + LA LL+GF K LFP+H WL Sbjct: 204 S-LNLADVAQRLPELE---------------TPAALTLAAAALLVGFMLKAALFPLHNWL 247 Query: 243 PDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIIC--QAIGSDFPNRLLLIFGMLSVAVA 300 P+AH+ AP VSA+LS +++ ++ L+R Y + + + + +LL SV + Sbjct: 248 PEAHASAPGTVSAVLSGLVVKAGIIGLVRTYQLFAGVELLDTATLGAILLWLAAASVVMG 307 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 +FF + Q D+K +LAYS++ N+G + + + P + A LH+ NH+L K LF +G Sbjct: 308 SFFAVFQHDLKLMLAYSTITNIGYIVMGWALASPQAMLGASLHLFNHALIKVTLFLAAGA 367 Query: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 ++ G R L + G+ + MPF+ ALA+ G+PP F+ ++ L + Sbjct: 368 LIYGTGLRTLEELRGIGRTMPFSCAALALAALAIVGVPPTAGFVGKWYIALGALQADRPF 427 Query: 421 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQA--VNRGDLGWLTTSPM 465 ++++L L VR+ + +P Q V ++ W +P+ Sbjct: 428 FALVVILGALLAAVYYVRIINALYFREPEQQAVVTAREVPWSMLAPV 474 >UniRef50_Q6MDQ5 Putative NADH-ubiquinone oxidoreductase chain L n=2 Tax=Parachlamydiaceae RepID=Q6MDQ5_PARUW Length = 628 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 128/432 (29%), Positives = 215/432 (49%), Gaps = 38/432 (8%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILA-LWVVQTAADAGEIF 64 M L L PL+ L+ F +R +T + ++ + L+ L L+ A + F Sbjct: 4 MVGLGLFLPLIGFLILFTNSQRLSRSTTSFIGCSTILLAFLIFLGELYFYVHAGMNSQTF 63 Query: 65 AAGLWL-----------HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 WL H+D L L I+ +GFL +YS+GYM HE Sbjct: 64 PLYQWLTLNGIQVNFSWHLDSLSLLMTLIITGVGFLIHLYSVGYMDHEK--------DFT 115 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIIC 172 Y+ + F+F MLL+V + +L++++ E L+S L+G + Q+ S+ +AA K ++ Sbjct: 116 RYFACLNFFIFAMLLLVLAGDLLMLFIGWEGVGLASYLLIGFWYQKPSAAKAATKAFVVN 175 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQS-SLLDPTLMLLAFVFLLIGFGT 231 +G +L ++A S++ KQ+ S+ P + ++ ++ G Sbjct: 176 RIGDLG----FLLGLLLTLHTFGTTDIASI-SQLAKQTFSIGAPIITVMTLLYFW-GATG 229 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ P++ WLPDA E P+PVSAL+ +A ++ + +++R + + S ++ Sbjct: 230 KSAQLPLYHWLPDA-MEGPTPVSALIHAATMVTAGIYLIVRTHTLFDL---SPLTLHVVG 285 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 I G ++ A L Q D+KR+LAYS+V +GL+ + GIG +AA+ H+ H+ Sbjct: 286 IVGGMTALFAGLCALAQTDLKRVLAYSTVSQLGLMFLACGIG---AYYAAMFHLTIHAFV 342 Query: 351 KTLLFCGSGNVL-LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 K LLF +GNV+ + Y T L + G+ KI T LF GAL+LAG+ PF F S+ + Sbjct: 343 KALLFLSAGNVVHMMYDTTALEKMGGLSKIFTKTRWLFLIGALSLAGVFPFAGFFSKDLI 402 Query: 410 ITAG-LARNHLL 420 + G L+ +HLL Sbjct: 403 LELGYLSGSHLL 414 >UniRef50_C4V3R7 NADH dehydrogenase (Quinone) n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V3R7_9FIRM Length = 634 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 120/404 (29%), Positives = 193/404 (47%), Gaps = 43/404 (10%) Query: 22 FACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA-AGLWLHI-------- 72 F R++ LSAT + V+ +L + +AL V G+ + +W HI Sbjct: 26 FTRREKNLSATIAI-VMMALAFAFSVFVALAAVNYQITMGDPYVMKTVWAHIGAVELSMG 84 Query: 73 ---DGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 D L L L I+ ++ L IYS+ YM H+ G ++ F LF ML + Sbjct: 85 VLIDPLTALMLVIVTLVSLLVYIYSVSYMEHDEGMGR--------FFAFISLFSAAMLGL 136 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 V S N + ++ E L S L+G Y + S+ EAA K I +G FG+ +L+ Sbjct: 137 VVSVNFLQLYVFWEGVGLCSYLLIGFYYDKVSAREAAKKAFITTRIG-DFGMLVGILLVQ 195 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT--KTGLFPMHAWLPDAH 246 + M E+ ++ + +L L + LL+ G K+G FP+H WL DA Sbjct: 196 VSFGTMDFIEL-----RLMMPAYVLVAGTGYLTVIGLLLFMGPIGKSGQFPLHVWLLDA- 249 Query: 247 SEAPSPVSALLSAVLLNCALLVLI-RYYIIICQAIGSDFPNRLLLIFGM--LSVAVAAFF 303 E P+P SAL+ A + A + L+ R + I S+ P + I G+ + AA Sbjct: 250 MEGPTPTSALIHAATMVAAGVFLVARAFFIF-----SECPLVMNFIAGLGAFTALFAAVI 304 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLL 363 + QR K +LAYS++ +G + + +GIG A++ H++ H+ K +LF +G V+ Sbjct: 305 AVTQRRFKAVLAYSTISQLGYMMLAVGIGA---FSASMFHLMTHAFFKAMLFLCAGAVMH 361 Query: 364 K-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 + D+ + G+ K MP T V G LA++G+PPF+ F S+ Sbjct: 362 ALHDETDITKMGGLWKKMPLTFVTMLIGVLAISGIPPFSGFFSK 405 >UniRef50_A7HHY8 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Anaeromyxobacter RepID=A7HHY8_ANADF Length = 676 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 106/365 (29%), Positives = 175/365 (47%), Gaps = 23/365 (6%) Query: 52 WVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 W+ D + + G L +D L G + ++ +G L IYS YM HE G Sbjct: 76 WIRVAGPDGRALVSIGWGLFVDRLSGTMIMVVTGVGTLIHIYSASYMSHEDDAG------ 129 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYII 170 Y+ + +LF+ ML +V + L++ + E L S L+G Y + A K + Sbjct: 130 YARYFTYLNLFVAAMLTLVLGDTLVLTFVGWEGVGLCSYLLIGFWYTDPAKAFAGRKAFV 189 Query: 171 ---ICTVGVAFGLFGTVLVYANAASVMPQA-EMAIFWSEVLKQSSLLDPTL---MLLAFV 223 I G GLF + ++ A+ QA I + ++ + T + A + Sbjct: 190 TNRIGDFGFLIGLFALLSIFGTASYGDLQAIARTIDPAATIQVGTFAGRTFQWAITFALI 249 Query: 224 FLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGS 282 L +G K+ P++ WLPDA + P+PVSAL+ +A ++ + ++ R + A + Sbjct: 250 GLFVGACGKSAQLPLYVWLPDAMA-GPTPVSALIHAATMVTAGVYLVARNAYLFSLAPAA 308 Query: 283 DFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALL 342 + I G L+ AA VQ DIK++LAYS+V +G + + +G+G +A +L Sbjct: 309 ---MATVTIVGALTALFAALIAFVQTDIKKVLAYSTVSQLGFMFIGVGVG---AWWAGVL 362 Query: 343 HILNHSLAKTLLFCGSGNVLLKYGTR-DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFN 401 H++ H+ K LF G+G+V+ G D+ + G+LK MP TA FG LA+ G P + Sbjct: 363 HLVTHAFFKACLFLGAGSVMHGMGDETDIRKMGGLLKKMPHTAATFGIATLAITGFVPLS 422 Query: 402 IFLSE 406 F S+ Sbjct: 423 GFWSK 427 >UniRef50_C0VMK3 NADH dehydrogenase I subunit L n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VMK3_9GAMM Length = 631 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 128/454 (28%), Positives = 208/454 (45%), Gaps = 64/454 (14%) Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 FA G+ L +DGL + + ++ +GFL I++ YMR E + ++ +F+LF+ Sbjct: 73 FAPGISLQLDGLSLIMMGMVTGVGFLIHIFASWYMRGEEDYAR--------FFSYFNLFV 124 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYIIICTVG------- 175 +MLL+V +NL +++ E L S L+G Y ++ AA K + VG Sbjct: 125 ASMLLLVLGDNLALLFLGWEGVGLCSYLLIGFYYSNPANGWAAIKAFTVTRVGDVFLLIA 184 Query: 176 -----VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 FG T + NAA+VM Q+ W+ ++ L +G Sbjct: 185 LFLLYQQFGTLNTQYIVENAATVMTQSSSLSIWTALM-----------------LFLGAA 227 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPN--R 287 K+ P+ WL DA + P+PVSAL+ +A ++ + + R + ++ A P + Sbjct: 228 GKSAQIPLQTWLADAMA-GPTPVSALIHAATMVTAGVYLCCRMFSVMEMA-----PEVMQ 281 Query: 288 LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNH 347 + I G +++ VA F LVQ DIKR+LAYS++ +G + + + G A L H+L H Sbjct: 282 FISITGAVTLLVAGFAALVQTDIKRILAYSTMSQLGYMFMAV---GAEAYQAGLFHMLTH 338 Query: 348 SLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNI-FLS 405 + K LLF SG V+L Y +++ + G+ K F F G ALA +P + F S Sbjct: 339 AFFKALLFLSSGAVILAYHHEQNIFKMGGLFKHNKFLFACFAIGGGALAAIPFLTVGFFS 398 Query: 406 EFMTITAGLARNHLLIIVLLLLLLTLVLAG-------LVRMAARVLMAKPPQAVN--RGD 456 + + A H I L + +AG R+ V + A + +G Sbjct: 399 KDAILWQVWAHGHTTGIETFGTLFWVGVAGAFLTSIYTFRLIWIVFFGEEKTAYHPIKGA 458 Query: 457 LGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGA 490 W +P+ IL V+ +G + PVI IL A Sbjct: 459 TYW---APLAILAVLSTGVGALLQAPVIGILNQA 489 >UniRef50_C6VXR9 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Bacteria RepID=C6VXR9_DYAFD Length = 639 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 135/477 (28%), Positives = 224/477 (46%), Gaps = 61/477 (12%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 ID L L L I+ +G L IYSIGYM H+ G+ ++ + +LFLF MLL+ Sbjct: 81 FQIDQLSLLMLMIITGVGSLIHIYSIGYMHHDSGFGK--------FFAYLNLFLFFMLLL 132 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVGVAFGLFGTVLVYA 188 V +N ++M+ E L S L+G + + ++ AA K I+ VG L G + A Sbjct: 133 VLGSNYVIMFIGWEGVGLCSYLLIGFWNKNTNYNNAARKAFIMNRVGDLGFLLGIFTIIA 192 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 SV E +S+ + DP ++ + +FL +G K+ P++ WLPDA + Sbjct: 193 TFGSV----EYTEVFSKAAAGFQVGDPVIITIT-LFLFVGAMGKSAQIPLYTWLPDAMA- 246 Query: 249 APSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLL--IFGMLSVAVAAFFIL 305 P+PVSAL+ +A ++ + ++IR ++ A P+ L + I G + AA L Sbjct: 247 GPTPVSALIHAATMVTAGIYMVIRSNVLYSLA-----PSTLEIVGIIGGATALFAASIGL 301 Query: 306 VQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY 365 +Q DIK++LAYS+V +G + + L G + A++ H++ H+ K LLF G+G+V+ Sbjct: 302 LQNDIKKVLAYSTVSQLGYMFMGL---GAMAYSASMFHVITHAFFKALLFLGAGSVIHAM 358 Query: 366 GT-RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIV- 423 +D+ + G+ K +P T + F +A++G+PPF F S+ + N +L ++ Sbjct: 359 SDEQDIRSMGGLRKKLPVTFLTFLIATIAISGIPPFAGFFSKDEILAHVFEHNKILWVIG 418 Query: 424 ---------LLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLA 474 + LL L G R Q + + T P++IL ++ A Sbjct: 419 VLGSVMTSFYMFRLLFLTFFGTFR-------GTHEQEHHLHESPASMTVPLIILAILSAA 471 Query: 475 MG-THIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFL----PSGTASVSEKHSER 526 G +P+ L G+H L + +D P+ A S HSE Sbjct: 472 GGFIGVPE------------ALHGSHQLAQFMAPLYDLAKTANPAAFAHTSLSHSEE 516 >UniRef50_D2BHY2 NADH:quinone oxidoreductase subunit 5 (Chain L) n=5 Tax=Dehalococcoides RepID=D2BHY2_DEHSV Length = 654 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 136/459 (29%), Positives = 213/459 (46%), Gaps = 61/459 (13%) Query: 9 LLLLTPLLFSLL-----CFACRKRRLSATRTVTVLHSLGITLLLILALWV---------V 54 L++L PL+ L F C+K LS + G+ L+L++W V Sbjct: 8 LIMLLPLICGALIAMGYAFFCKKPALSGYLGIA-----GVGGSLLLSIWGLTGLLGKEGV 62 Query: 55 QTAADAGEIFAAG------LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 A F+ G L L+ D L G+ ++ + + IYS GYM + + Sbjct: 63 SHYASGFSWFSIGNSVDISLNLNFDPLAGIMCFVILFVSLMVHIYSQGYMHGDKGYPR-- 120 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKY 168 YY F F +ML +V S+NL+ + E L+S L+G + R + A K Sbjct: 121 ------YYAFLSFFTASMLGLVLSDNLLFTFFFWELVGLASYLLIGFWFTRPAAANAAKK 174 Query: 169 IIICTVGVAFGLFGTVLV-YANAA-----SVMPQAEMAIFWSEVLKQSSLLDPTLMLLAF 222 I T G +L+ +AN S+ AEM + + ++L Sbjct: 175 AFIVTRIGDVGFLAAILILFANTGTLDINSLNGMAEMGFIGAGTVTVAALG--------- 225 Query: 223 VFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIG 281 + G K+ FP+H WLPDA E P+PVSAL+ +A ++ + ++ R Y I Sbjct: 226 --IFAGAVGKSAQFPLHVWLPDAM-EGPTPVSALIHAATMVAAGVFLVARTYPIFES--- 279 Query: 282 SDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGG-PLGIFAA 340 S + I G ++ AA LV D+KR+LAYS+V +G + + LG GG +GIF Sbjct: 280 SATAMLWVSIIGAVTAIFAATMALVMNDMKRILAYSTVSQLGYMMLGLGTGGIAIGIF-- 337 Query: 341 LLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 H+ NH+ K+LLF GSG+V GT D+ + G+ K MP T+ F +L+LAG+ P Sbjct: 338 --HLFNHAFFKSLLFLGSGSVNHATGTFDIREMGGLSKPMPVTSKTFLIASLSLAGIWPL 395 Query: 401 NIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRM 439 + F S+ I AG +++ +L L+ + L + R+ Sbjct: 396 SGFFSK-DEILAGAMDGQVILFILALITVFLTAFYMFRL 433 >UniRef50_A9B6Y2 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B6Y2_HERA2 Length = 683 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 122/425 (28%), Positives = 210/425 (49%), Gaps = 39/425 (9%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 ID L + ++ +G L +Y++GYM H+ P ++ + +LF+ ML++V Sbjct: 121 IDQLSVTMMLLVTGVGTLIHLYAVGYMSHDE-----RP---TRFFVYLNLFIVAMLMLVM 172 Query: 132 SNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVL-VYAN 189 NN ++++ E L S L+G + QR A+ K + VG FGL + ++A Sbjct: 173 GNNFVMLFLGWEGVGLCSFLLIGFWFEQRDPPWASVKAFVTNRVG-DFGLLMAMFAIWAL 231 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLD----PTLML---------LAFVFLLIGFGTKTGLF 236 A ++ + EVL+Q ++ T + +AF+ LL+G K+ Sbjct: 232 ARKPDGTFLHSLVFREVLEQGTVFSLQQYSTFFMGTQYTAAGAIAFM-LLLGVTGKSAQI 290 Query: 237 PMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYII--ICQAIGSDFPNRLLLIFG 293 P+ WLPDA + P+PVSAL+ +A ++ + ++IR + I + A+ S + G Sbjct: 291 PLFVWLPDAMA-GPTPVSALIHAATMVTAGVYLMIRTHPIFELSPAVQSS-----VTFIG 344 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 + + VAA L Q DIK++LA+S+V +G + +G+G + AA+ H+L H + K L Sbjct: 345 VATALVAASIALGQYDIKKVLAFSTVSQLGFMVAAVGMGAYV---AAMFHLLTHGIFKAL 401 Query: 354 LFCGSGNVLLKYGT-RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LF GSG+V+ +G +D+ + G+ K MP T + G + L G P + F S+ I Sbjct: 402 LFLGSGSVIHGFGNEQDMRKMGGLRKKMPVTFWTYIVGTMGLIGFPLVSGFWSKDEIIGH 461 Query: 413 GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP-PQAVNRGDLGWLTTSPMVILLVM 471 +H + +LL+L L + R + V + Q ++ + T P+ IL V+ Sbjct: 462 AFDHDHRTVGMLLILGAVLTSFYMGRQISMVFFGEQRDQHIHAHESSRWMTIPLAILAVL 521 Query: 472 MLAMG 476 LA G Sbjct: 522 TLASG 526 >UniRef50_Q1IS43 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Bacteria RepID=Q1IS43_ACIBL Length = 676 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 107/347 (30%), Positives = 170/347 (48%), Gaps = 38/347 (10%) Query: 71 HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF---HLFLFTML 127 ++D L + L ++ +GFL +YS GYM HE YY FF +LF+F ML Sbjct: 83 YLDQLTLIMLGVVTGVGFLIHVYSAGYMEHE-----------GGYYRFFAYLNLFMFFML 131 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFG-LFGTVLV 186 +V ++ ++M+ E L+S L+G + ++ S A K I FG L G L+ Sbjct: 132 TLVLGSSYLLMFVGWEGVGLASYLLIGFFFRKHSAAQAGKKAFITNRVGDFGFLIGLFLI 191 Query: 187 YANAASVMPQAEMAIFWSEVLKQSS----LLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 N ++ ++EV K +S L + LLIG K+ P++ WL Sbjct: 192 IQNWNTLQ--------YTEVFKAASGYGVETHAGLFTAIGICLLIGACGKSAQIPLYVWL 243 Query: 243 PDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLI--FGMLSVAVA 300 PDA E P+PVSAL+ A + A + Y + AI S P+ LLL+ G + A Sbjct: 244 PDA-MEGPTPVSALIHAATMVTAGV----YMVTRSNAIFSRSPHALLLVACIGAATAIFA 298 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 A + Q DIKR+LAYS++ +G + + G+G + + H++ H+ K LLF +G+ Sbjct: 299 ATIGITQTDIKRVLAYSTISQLGYMFLACGVG---AYASGVFHLMTHAFFKALLFLAAGS 355 Query: 361 VLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 V+ G +D+ + G+ K +P+T + +AG PP F S+ Sbjct: 356 VIHAVGGEQDMRNMGGLRKYIPWTFWVMTIATFTIAGFPPLAAFFSK 402 >UniRef50_Q02CT3 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02CT3_SOLUE Length = 624 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 105/354 (29%), Positives = 181/354 (51%), Gaps = 29/354 (8%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF---HLFLFTMLL 128 +D L + L ++ IG L IYSIGYM HE HG +Y FF +LF+F ML+ Sbjct: 85 VDRLTIVMLLVVTGIGSLIHIYSIGYMAHE--HGP----NFGGFYRFFAYLNLFMFFMLV 138 Query: 129 VVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYIIICTVGVAFGL-FGTVLV 186 +V N ++++ E L S L+G Y ++ + A K I+ +G FG L+ Sbjct: 139 LVLGANYLLLFVGWEGVGLCSYLLIGFYFDKKFATNAGNKAFIVNRIG-DFGFSLAMFLI 197 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 + + S+ ++EV ++ + + LL+G K+ P++ WLPDA Sbjct: 198 FHHFGSLD--------FAEVFHKAPGGTEATLTTICLLLLVGACGKSAQIPLYVWLPDAM 249 Query: 247 SEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFIL 305 + P+PVSAL+ +A ++ + + R +++ A G+ ++ I G+ + +AA L Sbjct: 250 A-GPTPVSALIHAATMVTAGVYMTARSWVLFTHAPGA---MDVMAIIGIATAFMAATIGL 305 Query: 306 VQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK- 364 Q DIK++ AYS+V +G + V +G G A + H++ H+ K LLF G+G+V+ Sbjct: 306 AQNDIKKVFAYSTVSQLGYMFVGVGSG---AFSAGVWHLVTHAFFKALLFLGAGSVIHSL 362 Query: 365 YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH 418 G +D+ + G+ K +P T +A++G+PPF+ F S+ + A +H Sbjct: 363 SGEQDMRNMGGLRKKIPITFWTMACAWVAISGIPPFSGFFSKDAILVAAYQHSH 416 >UniRef50_UPI00003837CC COG1009: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003837CC Length = 758 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 153/533 (28%), Positives = 250/533 (46%), Gaps = 49/533 (9%) Query: 1 MSYSVMFALLLLTPLLFSLLCFA--CRKRRLSAT-RTVTVLHSLGITLLLILALWVVQTA 57 MS + + A + P L S+L A R R ++A + L SLG L L L Sbjct: 1 MSSNTLLAAAAILPFLGSVLAGALPSRARNVAAALAGLVTLTSLGCILALTPQL------ 54 Query: 58 ADAGEIFAAGLWL---------HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 A + A WL +DGL LF ++ IG L +Y+ YM Sbjct: 55 AGGSSVVHAIDWLPSLGVRFVLRLDGLAWLFSVLVLAIGALVVLYARYYM------SPAD 108 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWK 167 PV + +F F+ ML ++ S NLI + E T++ S L+G Y ++ + A Sbjct: 109 PVPRL--FAYFLAFVGAMLGIILSGNLIQLVLFWELTSIVSFLLIGYWYDNAAARDGARM 166 Query: 168 YIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLI 227 + I G L GT+L+ S E + + ++ SSL P A V +L Sbjct: 167 SLTITAAGGLCLLVGTILIGRIVGSY--DLETVLASGDTIRNSSLYLP-----ALVLVLA 219 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPN 286 G TK+ FP H WLP A + AP+P+SA L SA ++ + ++IR + ++ G+D Sbjct: 220 GALTKSAQFPFHIWLPRAMA-APTPISAYLHSATMVKAGIFLMIRLWPVLA---GTDAWY 275 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 ++ GM ++ + ++ + Q D+K LLAYS++ ++GL+ + LG+ PL + AA+ H +N Sbjct: 276 WIVGTIGMATMLIGSWSAIFQHDLKGLLAYSTISHLGLITLLLGLDSPLAVVAAIFHTVN 335 Query: 347 HSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 H+ K LF G + + GTRD+ + G+ + MP+TA L A A+AG+P N FLS+ Sbjct: 336 HATFKASLFMAVGIIDHETGTRDMRRLSGLWRAMPYTATLAMVAAAAMAGVPLLNGFLSK 395 Query: 407 FMTITAGLARN-----HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR---GDLG 458 M ++ + HL + VL L + +R + +PP + + Sbjct: 396 EMFLSEAVDNMGDHPIHLALPVLATLASAFTMLYSLRFIRQTFFGRPPHDLPEEPHEPVR 455 Query: 459 WLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDF 511 W+ P+ +L++ +A+G +P I G + + G P + WH F Sbjct: 456 WMRI-PIEMLVLTCIAIGL-VPNLTIGPALGRAVRAVLGDATPPYSLAIWHGF 506 >UniRef50_C6A3Z7 Membrane-bound hydrogenase MBH 2, subunit Mbh2H (Hydrogenase subunit) n=2 Tax=Euryarchaeota RepID=C6A3Z7_THESM Length = 517 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 104/422 (24%), Positives = 198/422 (46%), Gaps = 39/422 (9%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 +D +G ++ F+ IYS +++ + L YY L +L + Sbjct: 83 FEVDAMGAFMAISATLMSFIGAIYSYSHVKKDTG--------LEKYYALLMLLEAGILGM 134 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 V + +L ++ +E ++ + LVG R + EA KY+I+ V LF ++Y Sbjct: 135 VLTGDLFNLFVFLEIAGIAGSALVGFRNYRGEASEAGIKYLIVSAVASLMVLFAVSILYG 194 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 ++ +A V +++D ++A L F K G PMH W+PDA++E Sbjct: 195 QYGNL----NLAYIAKNV--SFNMVD----MIALGLLFTSFAMKCGAVPMHYWVPDAYTE 244 Query: 249 APSPVSA-LLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQ 307 P+ ++ LL A + L + + + I ++ I G+L++ + L+Q Sbjct: 245 VPAGINPPLLVATYASLYALFRVSFTLFANVVIDLARVGWIMSILGVLTMFIGVTMALIQ 304 Query: 308 RDIKRLLAYSSVENMGLVAVELGIG-------------GPLGIFAALLHILNHSLAKTLL 354 +D+KRL+++ ++ G + + +G+G G + + HI+N+ + K+LL Sbjct: 305 KDVKRLMSHHAISQTGYMLLGVGVGLTVLHDPSKLAEFGRDAMAGGVFHIINNIIYKSLL 364 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 +G + GTR+LN + G+ + MP T + F GA A++G+PPFN F S+F+ Sbjct: 365 LMTAGALFYVTGTRNLNEMGGLARKMPITTISFMVGAAAISGLPPFNGFASKFLIYETSY 424 Query: 415 ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV-NRGDLGWLTTSPMVILLVMML 473 N LL V ++ L LA V++ A + P + N+ ++ PM++ ++++ Sbjct: 425 RLNPLL-TVFAMVTSVLTLASFVKVFASAFLGPPLEKFENKREV----PKPMIVAMLILA 479 Query: 474 AM 475 A+ Sbjct: 480 AL 481 >UniRef50_D2MI08 NADH dehydrogenase (Quinone) n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MI08_9BACT Length = 489 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 121/463 (26%), Positives = 224/463 (48%), Gaps = 40/463 (8%) Query: 4 SVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI 63 +V+F L L + ++C + R S ++TVL ++ + +L L + GE+ Sbjct: 7 AVLFLLPLFAAIAMPVVCL--KHREWSRPISLTVLSAMVVVSVLNL-----NSVIRYGEV 59 Query: 64 FAA--------GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 A G+ DGL + L L V+G L +++ G +P L Sbjct: 60 RYAFSGWAPPLGIEWVADGLASVVLVALSVLGLLALVFA----------GPTAPRDLGGR 109 Query: 116 YGFFHLFLFTMLLVVT----SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIII 171 F++ + ++ +T + +L ++ +E ++S LVG+ G ++ L AA++Y+++ Sbjct: 110 VVHFYVLILLLIAALTGIAFAGDLFNLFVFLEVAAIASYGLVGVAGGKA-LFAAFRYLLL 168 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 T+G + L G YA A+ + A+MA E L LL ++ +F+ IG G Sbjct: 169 GTLGASLYLLGVSYFYA-ASGTLNMADMA----EQLPH--LLTSKAVVGGLLFMFIGLGI 221 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIR--YYIIICQAIGSDFPNRLL 289 K L P H WLPDA++ AP +S +L+A++ ALL IR Y+++ + I D P LL Sbjct: 222 KMALVPFHVWLPDAYTHAPESISPILAALVTKVALLGWIRIIYWVLGAKVIIYDIPVLLL 281 Query: 290 LIFGMLSVAV-AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 + AV A L+ R+IK + AY + ++G++ + + G G + ++LN + Sbjct: 282 VGVLGTLAAVIGAVLALMARNIKTMFAYGGISHIGIILIGVTQGNKTGFAGGVFYLLNDA 341 Query: 349 LAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 + + LF +G ++ +YG R + + + K +P+ AL + G+PP F ++ Sbjct: 342 VMQGALFFLAGALVFQYGVRTVQDLGQIGKRVPWLTGALIVIALGMVGLPPTGGFFGKWY 401 Query: 409 TITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA 451 I L ++ + + +LL L LA V++ + +PP++ Sbjct: 402 IILGALEAHNYVAVAAVLLSTLLTLAYFVKLFEAMFRQRPPRS 444 >UniRef50_B5IUC0 NADH-Ubiquinone/plastoquinone (Complex I), domain protein n=2 Tax=Thermococcus RepID=B5IUC0_9EURY Length = 620 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 85/323 (26%), Positives = 153/323 (47%), Gaps = 16/323 (4%) Query: 143 EATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIF 202 E T S +V Y +++SL KY ++ G L ++YA ++ F Sbjct: 130 EIMTFGSFMMVLKYNRKASL----KYFLLSVFGAYAMLIAIGIIYAKVGALDFATIQQAF 185 Query: 203 WSEVLKQS----SLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS 258 + + ++ + +L MLL F L+ FG K G+FP+H W PDA+SE +A+ S Sbjct: 186 YQDAMRGTFGADTLFSRNDMLLVFGLFLVAFGVKAGMFPLHVWAPDAYSETNQSYTAMFS 245 Query: 259 AVLLNCALLVLIRYYIIICQAIGSDFPN--------RLLLIFGMLSVAVAAFFILVQRDI 310 VL + ++ YI++ + F ++ + G L++ V +Q DI Sbjct: 246 GVLSKAGVYGMLVIYILLGTRLVYQFGRIGAAPKFGYIIALLGGLTIIVGGLLAALQEDI 305 Query: 311 KRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDL 370 ++L AYSS+ +G + V +G+G L I AA+ H ++H+L K L F ++L+ G + Sbjct: 306 RKLFAYSSISQIGYILVGIGVGTALSIEAAIYHAISHALFKGLFFLIVATIVLRTGKTEF 365 Query: 371 NVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLT 430 + G+ + MP T + L+LAG+PP F S+++ A + N ++ ++ Sbjct: 366 KDMGGLAEKMPITFAMAFVAILSLAGIPPLVGFASKWLLFEAVIHENMPILGGMIFFGSA 425 Query: 431 LVLAGLVRMAARVLMAKPPQAVN 453 + L+R V + P ++ Sbjct: 426 IGFVYLIRFTYAVWFGQRPTELD 448 >UniRef50_A1ZLY6 NAD(P)H-quinone oxidoreductase chain 5 (NAD(P)Hdehydrogenase I, chain 5) n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZLY6_9SPHI Length = 702 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 102/362 (28%), Positives = 191/362 (52%), Gaps = 42/362 (11%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L+ID L L + ++ ++ L ++S+ YM+ + + Y+ + LF F+ML + Sbjct: 76 LYIDNLSALMMIVVTLVSALVHMFSLEYMKTDKNYNR--------YFAYLGLFTFSMLGI 127 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLV-- 186 + +NL++++ E +SS L+G Y ++S+ A+ K ++ +G L G +LV Sbjct: 128 IIFHNLLIIYIFWELVGVSSYLLIGFWYEKKSATRASQKAFLVNRIGDVGFLAGILLVFN 187 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 Y +++ A+ F S L ++L+ + L G K+ FP+ WLPDA Sbjct: 188 YFGDFNLLSIAQSPQFAS--------LSVGVLLIIGLCLFCGAVGKSAQFPLQVWLPDA- 238 Query: 247 SEAPSPVSALL-SAVLLNCALLVLIR-YYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFI 304 E P+PVSAL+ +A ++ + +L R ++++ +A+ ++ G ++ + AF Sbjct: 239 MEGPTPVSALIHAATMVAAGVYLLARIFFLLNLEAL------SVIATIGCITAFIGAFSA 292 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVL-- 362 L Q DIK++LAYS++ +G + + +G+G A+LLH+L H+ K LF +G V+ Sbjct: 293 LAQSDIKKVLAYSTISQLGYMVMGMGVGAYE---ASLLHLLTHAFFKACLFLCAGAVIHS 349 Query: 363 ---------LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 + + +++ ++ G+ K MPFT + + A ALAG+P F+ FLS+ ++ Sbjct: 350 MHQLEHKLNIHFDAQNMYLMGGLRKAMPFTFMCYVLSAAALAGLPFFSGFLSKDAILSGS 409 Query: 414 LA 415 LA Sbjct: 410 LA 411 >UniRef50_B4U8H9 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=Aquificaceae RepID=B4U8H9_HYDS0 Length = 633 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 120/400 (30%), Positives = 205/400 (51%), Gaps = 66/400 (16%) Query: 92 IYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAF 151 +Y+IGYMR+ + ++ +F LFLF+MLL++ ++LI+M+ E L+S Sbjct: 95 VYAIGYMRYLFGNWTF------KFFAYFSLFLFSMLLILLGDSLILMFFGWEGVGLASYL 148 Query: 152 LVGIYGQ-----RSSLEA-------AWKYI--IICTVGVAFGLFGTV---LVYANAASVM 194 L+G + + ++SLEA W +I II T F LFGT+ ++ NA+ V Sbjct: 149 LIGYFHEEKFATKASLEAFVMNRIGDWSFILGIIYT----FWLFGTLSLPKLFENASYV- 203 Query: 195 PQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVS 254 P +A TL+L G K+G P+H WLP+A + P+PVS Sbjct: 204 PGITLA---------------TLLLFG------GAVGKSGQIPLHTWLPNAMA-GPTPVS 241 Query: 255 ALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRL--LLIFGMLSVAVAAFFILVQRDIK 311 ALL +A ++ + ++ R Y I + P L + I G++++ AA V DIK Sbjct: 242 ALLHAATMVAAGVYMVARLYPIFSLS-----PTTLSYITITGVVTMLFAALVATVHDDIK 296 Query: 312 RLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVL--LKYGTRD 369 +++A+S++ + ++ LG+ P AA+ H+ H+ K LLF +G V+ L + T++ Sbjct: 297 KIIAFSTMSQLAIMFTALGMRFPT---AAIFHLTTHAFFKALLFLAAGAVITGLHHHTQN 353 Query: 370 LNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLL 429 + + G+ K MP T F GALAL+G PPF + S+ ++ + +N L + L+L+ Sbjct: 354 IFEMGGIKKYMPITFGAFMIGALALSGFPPFAGYFSKDAIVSLIMDKNTL--VATLILIT 411 Query: 430 TLVLAGLV-RMAARVLMAKPPQAVNRGDLGWLTTSPMVIL 468 +L+ A + R A V + + ++ + + PM+IL Sbjct: 412 SLLTAYYITREAFVVFLGEGHYHEEPHEVEPIMSFPMLIL 451 >UniRef50_P77416 Hydrogenase-4 component D n=66 Tax=Bacteria RepID=HYFD_ECOLI Length = 479 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 130/433 (30%), Positives = 209/433 (48%), Gaps = 36/433 (8%) Query: 53 VVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 V T + G++ GL ID + L L ++ +G L IYS GY+ + + E Sbjct: 57 VTLTLVNVGDVALFGL--VIDRVSTLILFVVVFLGLLVTIYSTGYLTDK--NREHPHNGT 112 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIIC 172 YY F +F+ M +V S+ L+ E T S L+ Y + +A K ++I Sbjct: 113 NRYYAFLLVFIGAMAGLVLSSTLLGQLLFFEITGGCSWALISYYQSDKAQRSALKALLIT 172 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTK 232 +G + GL Y AA++ Q + L S L L + +L K Sbjct: 173 HIG-SLGL------YLAAATLFLQTG-----TFALSAMSELHGDARYLVYGGILFAAWGK 220 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAI-GSDFPNRLL-- 289 + PM AWLPDA EAP+P+SA L A A +V + YI I G + P+ + Sbjct: 221 SAQLPMQAWLPDAM-EAPTPISAYLHA-----ASMVKVGVYIFARAIIDGGNIPHVIGGV 274 Query: 290 -LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGI---GGPLGIFAALLHIL 345 ++ ++++ L Q+D+KRLLA+S++ +G + L + G L + ++ +I+ Sbjct: 275 GMVMALVTILYGFLMYLPQQDMKRLLAWSTITQLGWMFFGLSLSIFGSRLALEGSIAYIV 334 Query: 346 NHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 NH+ AK+L F +G + GTR L + G+L +P V F ALA+ G+PPFN F S Sbjct: 335 NHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLHTLPLPGVGFCVAALAITGVPPFNGFFS 394 Query: 406 EFMTITAGLA---RNHLLIIVLLLLLLTLV--LAGLVRMAARVLMAKPPQAVNRGDLGWL 460 +F AG A +L+ ++LL++ V A +R RV+ KP +AV D L Sbjct: 395 KFPLFAAGFALSVEYWILLPAMILLMIESVASFAWFIRWFGRVVPGKPSEAV--ADAAPL 452 Query: 461 TTSPMVILLVMML 473 S ++L+V+++ Sbjct: 453 PGSMRLVLIVLIV 465 >UniRef50_Q28T51 Proton-translocating NADH-quinone oxidoreductase chain L n=270 Tax=cellular organisms RepID=Q28T51_JANSC Length = 711 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 125/423 (29%), Positives = 206/423 (48%), Gaps = 52/423 (12%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 M +LL PL+ +L+C RL + V+ + G L L WVV + GE + Sbjct: 1 METILLFAPLVGALIC--GFSWRLIGEQAACVI-ATGFLFLSCLLSWVVFIGFE-GETYT 56 Query: 66 AGL--WLH-----------IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 L W+ +D L + L ++ + L +YS GYM H+ E Sbjct: 57 RSLFTWIESGTLFTDWAIRVDRLTAIMLIVITSVSALVHLYSFGYMAHDENFKE-GESYR 115 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIII 171 ++ + F FTML++VT++NL+ ++ E ++S L+G Y ++ S AA K I+ Sbjct: 116 PRFFAYLSFFTFTMLMLVTADNLLQLFFGWEGVGVASYLLIGFYFRKPSAGAAAMKAFIV 175 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLML-----LAFVFLL 226 VG L G ++ S+ Q ++ + L + S++ + L +AF+ L Sbjct: 176 NRVGDFGFLLGIFALFWMTDSI--QFDVVLGMGAELAEMSIIFLGMELNAAETIAFL-LF 232 Query: 227 IGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-------VLLNCALLVLIRYYIIICQA 279 IG K+ +H WLPDA E P+PVSAL+ A V L C + +I Y Sbjct: 233 IGAMGKSAQLLLHVWLPDA-MEGPTPVSALIHAATMVTAGVFLVCRMSPVIEY------- 284 Query: 280 IGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFA 339 + ++I G LS VAA LVQ DIKR++AYS++ +G + V G+ G+++ Sbjct: 285 --APLAGNFIIIIGALSAFVAATIGLVQNDIKRVIAYSTMSQLGYMFVAAGV----GVYS 338 Query: 340 -ALLHILNHSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFT--AVLFGGGALALA 395 A+ H+L H+ K +LF G+G+V+ + +D+ G+ K +P+T A++ G A+ Sbjct: 339 VAMFHLLTHAFFKAMLFLGAGSVIHAMHHEQDMRNYGGLRKKIPYTFWAMMIGTLAITGV 398 Query: 396 GMP 398 G+P Sbjct: 399 GIP 401 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77437 Hydrogenase-4 component F n=52 Tax=Bacteria RepI... 534 e-150 UniRef50_A1JTZ4 Hydrogenase-4 component F n=19 Tax=Bacteria RepI... 429 e-119 UniRef50_C7MLM5 Formate hydrogenlyase subunit 3/multisubunit Na+... 400 e-110 UniRef50_A4E716 Putative uncharacterized protein n=1 Tax=Collins... 394 e-108 UniRef50_Q0W2B8 Hydrogenase, membrane subunit 1-like protein (Ec... 366 1e-99 UniRef50_UPI00003837CC COG1009: NADH:ubiquinone oxidoreductase s... 361 5e-98 UniRef50_B8I2P6 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 360 7e-98 UniRef50_B9XHI6 Proton-translocating NADH-quinone oxidoreductase... 360 8e-98 UniRef50_Q1IS54 Proton-translocating NADH-quinone oxidoreductase... 351 5e-95 UniRef50_B3EIA1 Proton-translocating NADH-quinone oxidoreductase... 349 2e-94 UniRef50_B1WQD4 NADH dehydrogenase subunit 5 n=9 Tax=Cyanobacter... 349 2e-94 UniRef50_Q2RXM0 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospiril... 347 4e-94 UniRef50_B3QY40 Proton-translocating NADH-quinone oxidoreductase... 346 1e-93 UniRef50_A6LXP7 Proton-translocating NADH-quinone oxidoreductase... 346 1e-93 UniRef50_B0BZT2 Proton-translocating NAD(P)H-quinone oxidoreduct... 345 2e-93 UniRef50_Q24ST7 Hydrogenase-4 component F n=3 Tax=Desulfitobacte... 343 9e-93 UniRef50_Q1H3T5 NADH dehydrogenase (Quinone) n=12 Tax=Proteobact... 343 1e-92 UniRef50_C7R7H2 Proton-translocating NADH-quinone oxidoreductase... 340 5e-92 UniRef50_B8FRJ9 Proton-translocating NADH-quinone oxidoreductase... 340 5e-92 UniRef50_C0YTV8 NADH dehydrogenase I chain L n=1 Tax=Chryseobact... 340 6e-92 UniRef50_C8W239 Hydrogenase 4, membrane subunit n=1 Tax=Desulfot... 340 6e-92 UniRef50_Q04YB3 NADH dehydrogenase (Ubiquinone), L chain n=7 Tax... 339 2e-91 UniRef50_B5YKJ0 NADH-quinone oxidoreductase chain l n=1 Tax=Ther... 339 2e-91 UniRef50_Q55429 NAD(P)H-quinone oxidoreductase chain 5 n=19 Tax=... 339 2e-91 UniRef50_A6TVL5 NADH dehydrogenase (Quinone) n=1 Tax=Alkaliphilu... 338 3e-91 UniRef50_B2A3T0 NADH dehydrogenase (Quinone) n=2 Tax=Clostridia ... 338 3e-91 UniRef50_C0Z765 NADH-quinone oxidoreductase chain L n=2 Tax=Baci... 338 3e-91 UniRef50_A9F578 NADH dehydrogenase I chain M n=1 Tax=Sorangium c... 338 4e-91 UniRef50_B3QXL9 Proton-translocating NADH-quinone oxidoreductase... 335 2e-90 UniRef50_Q11VC3 NADH dehydrogenase I chain L n=5 Tax=Bacteroidet... 335 2e-90 UniRef50_B1KJV8 Proton-translocating NADH-quinone oxidoreductase... 335 2e-90 UniRef50_C5A2R1 Formate hydrogenlyase II subunit D (Mhy2D) n=1 T... 335 2e-90 UniRef50_Q52978 Probable K(+)/H(+) antiporter subunit A/B n=110 ... 335 2e-90 UniRef50_B5EN60 Proton-translocating NADH-quinone oxidoreductase... 335 3e-90 UniRef50_A6TVL4 NADH dehydrogenase (Quinone) n=2 Tax=Alkaliphilu... 334 4e-90 UniRef50_Q9XAR5 NADH-quinone oxidoreductase subunit L n=38 Tax=A... 334 4e-90 UniRef50_Q8M9U5 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 334 5e-90 UniRef50_Q02CT3 Proton-translocating NADH-quinone oxidoreductase... 334 5e-90 UniRef50_Q28T51 Proton-translocating NADH-quinone oxidoreductase... 334 6e-90 UniRef50_P31971 NAD(P)H-quinone oxidoreductase chain 5 n=25 Tax=... 334 7e-90 UniRef50_B2V8R3 NADH dehydrogenase (Quinone) n=1 Tax=Sulfurihydr... 333 9e-90 UniRef50_C9RKX6 Proton-translocating NADH-quinone oxidoreductase... 333 1e-89 UniRef50_A0AL63 Complete genome n=20 Tax=Bacillales RepID=A0AL63... 333 1e-89 UniRef50_Q67NV3 Na+/H+ antiporter subunit n=1 Tax=Symbiobacteriu... 332 1e-89 UniRef50_A8LTG8 NADH dehydrogenase (Quinone) n=58 Tax=Proteobact... 332 1e-89 UniRef50_C1SM60 NADH dehydrogenase subunit L n=1 Tax=Denitrovibr... 332 3e-89 UniRef50_Q12ZH7 Na+/H+ antiporter subunit n=2 Tax=Methanosarcina... 332 3e-89 UniRef50_Q895D8 Sodium/proton antiporter shaA n=1 Tax=Clostridiu... 331 3e-89 UniRef50_D1B460 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 331 4e-89 UniRef50_B8J1C9 Proton-translocating NADH-quinone oxidoreductase... 331 4e-89 UniRef50_A7GV43 Proton-translocating NADH-quinone oxidoreductase... 331 4e-89 UniRef50_B2A694 NADH dehydrogenase (Quinone) n=1 Tax=Natranaerob... 331 4e-89 UniRef50_D0LZ05 Proton-translocating NADH-quinone oxidoreductase... 331 5e-89 UniRef50_Q1AVJ0 Proton-translocating NADH-quinone oxidoreductase... 331 5e-89 UniRef50_A1ALQ0 Proton-translocating NADH-quinone oxidoreductase... 331 5e-89 UniRef50_Q32RH9 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 330 6e-89 UniRef50_C1F220 NADH dehydrogenase I, L subunit n=2 Tax=Bacteria... 330 6e-89 UniRef50_A7ZBL2 Hydrogenase-4 component F n=6 Tax=Epsilonproteob... 330 7e-89 UniRef50_C4V3R7 NADH dehydrogenase (Quinone) n=1 Tax=Selenomonas... 329 1e-88 UniRef50_B4UA28 NADH dehydrogenase (Quinone) n=1 Tax=Hydrogenoba... 329 1e-88 UniRef50_C0JX69 Subunit 5 of NADH-plastoquinone oxidoreductase n... 329 1e-88 UniRef50_Q8R9B0 Formate hydrogenlyase subunit 3/Multisubunit Na+... 329 2e-88 UniRef50_Q1IS53 Proton-translocating NADH-quinone oxidoreductase... 329 2e-88 UniRef50_D2BHY2 NADH:quinone oxidoreductase subunit 5 (Chain L) ... 329 3e-88 UniRef50_D2QSX4 Proton-translocating NADH-quinone oxidoreductase... 328 3e-88 UniRef50_C6VXR9 Proton-translocating NADH-quinone oxidoreductase... 328 3e-88 UniRef50_Q3AH00 Proton-translocating NADH-quinone oxidoreductase... 327 5e-88 UniRef50_A5UVF8 Proton-translocating NADH-quinone oxidoreductase... 327 6e-88 UniRef50_Q12ZH4 Na+/H+ antiporter subunit n=2 Tax=Methanosarcina... 326 1e-87 UniRef50_B6YWQ6 Hydrogenase 4, subunit 3 n=2 Tax=Thermococcus Re... 326 1e-87 UniRef50_B1ZSF1 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus te... 326 1e-87 UniRef50_A4GYW4 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 326 1e-87 UniRef50_B4SLF9 NADH dehydrogenase (Quinone) n=20 Tax=cellular o... 325 2e-87 UniRef50_B9DJY9 Putative NADH dehydrogenase I chain L n=1 Tax=St... 325 2e-87 UniRef50_Q13II8 NADH dehydrogenase (Quinone) n=3 Tax=Proteobacte... 325 2e-87 UniRef50_C6HUH6 NADH dehydrogenase (Quinone), chain L n=2 Tax=Ba... 325 2e-87 UniRef50_A9B6Y2 Proton-translocating NADH-quinone oxidoreductase... 325 2e-87 UniRef50_Q2W3J5 NADH:ubiquinone oxidoreductase subunit 5 n=6 Tax... 325 3e-87 UniRef50_C6D5D4 Proton-translocating NADH-quinone oxidoreductase... 325 3e-87 UniRef50_B6YQ51 NADH dehydrogenase I subunit L n=32 Tax=Bacteroi... 324 4e-87 UniRef50_Q1IS43 Proton-translocating NADH-quinone oxidoreductase... 324 5e-87 UniRef50_C4K6N0 NADH dehydrogenase I chain L, membrane subunit n... 324 5e-87 UniRef50_C5VLQ3 NADH dehydrogenase subunit 5 n=10 Tax=Bacteroida... 324 6e-87 UniRef50_Q3J3E6 NADH dehydrogenase I chain L n=72 Tax=cellular o... 322 2e-86 UniRef50_C5CEV1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 322 2e-86 UniRef50_B2IHV5 Proton-translocating NADH-quinone oxidoreductase... 322 2e-86 UniRef50_B9ZEN4 Proton-translocating NADH-quinone oxidoreductase... 322 3e-86 UniRef50_A7HHY8 Proton-translocating NADH-quinone oxidoreductase... 321 4e-86 UniRef50_B2A693 Proton-translocating NADH-quinone oxidoreductase... 321 4e-86 UniRef50_Q49W91 Na(+)/H(+) antiporter subunit A1 n=19 Tax=Bacill... 321 5e-86 UniRef50_Q2S2L2 NADH dehydrogenase I, L subunit n=3 Tax=Rhodothe... 320 6e-86 UniRef50_P56752 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 320 7e-86 UniRef50_B3Q7M3 Proton-translocating NADH-quinone oxidoreductase... 320 8e-86 UniRef50_Q21TA5 NADH dehydrogenase (Quinone) n=6 Tax=Bacteria Re... 320 8e-86 UniRef50_B2ULN9 Proton-translocating NADH-quinone oxidoreductase... 320 1e-85 UniRef50_Q85FH9 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 320 1e-85 UniRef50_B1NWJ6 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 319 2e-85 UniRef50_Q5FC98 NADH-quinone oxidoreductase chain L n=18 Tax=Ric... 318 3e-85 UniRef50_Q6GBK7 Putative antiporter subunit mnhA2 n=63 Tax=Staph... 318 3e-85 UniRef50_UPI0001C3127D proton-translocating NADH-quinone oxidore... 318 4e-85 UniRef50_B6YWP6 Hydrogenase 4, subunit 3 n=3 Tax=Thermococcus Re... 318 4e-85 UniRef50_C5QQQ5 CPA3 family monovalent cation:proton (H+) antipo... 317 6e-85 UniRef50_Q9K1B0 NADH-quinone oxidoreductase subunit L n=127 Tax=... 317 8e-85 UniRef50_A3ERI6 NADH dehydrogenase (Quinone), chain L n=8 Tax=ce... 317 8e-85 UniRef50_B0SFU4 NADH dehydrogenase (Ubiquinone), M chain n=6 Tax... 317 9e-85 UniRef50_A9B485 Proton-translocating NADH-quinone oxidoreductase... 317 9e-85 UniRef50_A1ZLY6 NAD(P)H-quinone oxidoreductase chain 5 (NAD(P)Hd... 316 1e-84 UniRef50_D0XMF8 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteo... 315 2e-84 UniRef50_A1RWL5 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum... 315 3e-84 UniRef50_B3DZT2 NADH dehydrogenase subunit L n=2 Tax=Verrucomicr... 315 3e-84 UniRef50_B6YTX9 Hydrogenase 4, component F or formate hydrogen l... 315 3e-84 UniRef50_C6W0W0 Proton-translocating NADH-quinone oxidoreductase... 314 5e-84 UniRef50_Q1IZW2 NADH-quinone oxidoreductase, L subunit n=3 Tax=D... 314 6e-84 UniRef50_C7JBM0 NADH-quinone oxidoreductase chain L n=8 Tax=Acet... 314 8e-84 UniRef50_Q9RGZ5 Na(+)/H(+) antiporter subunit A n=9 Tax=Firmicut... 313 1e-83 UniRef50_Q608Y7 NADH dehydrogenase I, L subunit n=2 Tax=Gammapro... 313 1e-83 UniRef50_A8ERK5 NADH-quinone oxidoreductase, L subunit n=1 Tax=A... 313 1e-83 UniRef50_B3PW10 NADH-ubiquinone oxidoreductase protein, chain L ... 313 1e-83 UniRef50_Q9I0J1 NADH-quinone oxidoreductase subunit L n=113 Tax=... 312 1e-83 UniRef50_Q7NHD8 NADH dehydrogenase subunit 5 n=1 Tax=Gloeobacter... 312 2e-83 UniRef50_A1RWL8 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum... 312 2e-83 UniRef50_C7M2U8 Proton-translocating NADH-quinone oxidoreductase... 312 2e-83 UniRef50_Q9UYP1 Hydrogenase 4, component F or formate hydrogen l... 312 3e-83 UniRef50_D2RZ77 Proton-translocating NADH-quinone oxidoreductase... 312 3e-83 UniRef50_C6CN10 NADH/Ubiquinone/plastoquinone (Complex I) n=15 T... 311 4e-83 UniRef50_D1Y0I6 Putative NADH dehydrogenase subunit L n=1 Tax=Pr... 311 5e-83 UniRef50_A5CFN9 NADH dehydrogenase I chain L n=2 Tax=Orientia ts... 311 5e-83 UniRef50_C8W236 Hydrogenase, membrane subunit n=1 Tax=Desulfotom... 310 7e-83 UniRef50_B9LUW7 NADH/Ubiquinone/plastoquinone (Complex I) n=13 T... 310 1e-82 UniRef50_C0GDB1 NADH dehydrogenase (Quinone) n=2 Tax=Dethiobacte... 309 1e-82 UniRef50_B8DNI8 NADH dehydrogenase (Quinone) n=4 Tax=Desulfovibr... 309 1e-82 UniRef50_Q7UXC2 NADH dehydrogenase/oxidoreductase n=1 Tax=Rhodop... 309 1e-82 UniRef50_Q2YA95 Proton-translocating NADH-quinone oxidoreductase... 309 2e-82 UniRef50_Q609T5 Hydrogenase subunit n=1 Tax=Methylococcus capsul... 309 2e-82 UniRef50_A5GD02 Proton-translocating NADH-quinone oxidoreductase... 309 2e-82 UniRef50_C6HVM6 Putative hydrogenase-4 subunit (HyfF) n=1 Tax=Le... 309 3e-82 UniRef50_C0QBF3 HyfB n=1 Tax=Desulfobacterium autotrophicum HRM2... 308 3e-82 UniRef50_Q9UYN2 Hydrogenase 4, component B or formate hydrogen l... 308 3e-82 UniRef50_A1SE38 Proton-translocating NADH-quinone oxidoreductase... 308 3e-82 UniRef50_B1I6I5 NADH-quinone oxidoreductase subunit N n=1 Tax=Ca... 308 5e-82 UniRef50_D1A433 Proton-translocating NADH-quinone oxidoreductase... 307 6e-82 UniRef50_Q4UWA7 NADH-ubiquinone oxidoreductase NQO12 subunit n=5... 307 8e-82 UniRef50_Q3AB32 Carbon monoxide-induced hydrogenase, membrane an... 307 9e-82 UniRef50_Q6MDQ5 Putative NADH-ubiquinone oxidoreductase chain L ... 306 1e-81 UniRef50_Q39QB8 NADH-plastoquinone oxidoreductase, chain 5 n=8 T... 306 1e-81 UniRef50_Q9PMA7 NADH-quinone oxidoreductase subunit L n=43 Tax=E... 306 1e-81 UniRef50_C0A9K9 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae... 306 2e-81 UniRef50_C0GJ30 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacte... 306 2e-81 UniRef50_Q2RXM5 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospiril... 305 2e-81 UniRef50_B1ZRS2 Proton-translocating NADH-quinone oxidoreductase... 305 2e-81 UniRef50_C1ZFV1 NADH dehydrogenase subunit L n=1 Tax=Planctomyce... 305 3e-81 UniRef50_C2FWK2 Possible NADH dehydrogenase (Quinone) n=2 Tax=Sp... 305 3e-81 UniRef50_B8FUM3 NADH dehydrogenase (Quinone) n=3 Tax=Desulfitoba... 305 3e-81 UniRef50_C1A8Y3 NADH-quinone oxidoreductase chain L n=1 Tax=Gemm... 305 4e-81 UniRef50_Q2FZV1 Na(+)/H(+) antiporter subunit A1 n=72 Tax=Bacill... 305 4e-81 UniRef50_C0VMK3 NADH dehydrogenase I subunit L n=1 Tax=Acinetoba... 304 4e-81 UniRef50_B2SEW0 NADH dehydrogenase I, L subunit n=25 Tax=Proteob... 304 4e-81 UniRef50_Q2WAW3 Formate hydrogenlyase subunit 3/Multisubunit Na+... 304 5e-81 UniRef50_B2V982 Proton-translocating NADH-quinone oxidoreductase... 304 5e-81 UniRef50_Q0F380 NADH dehydrogenase subunit N n=1 Tax=Mariprofund... 304 5e-81 UniRef50_B0BZT1 Proton-translocating NAD(P)H-quinone oxidoreduct... 303 7e-81 UniRef50_C1XJC0 NADH dehydrogenase subunit L n=2 Tax=Meiothermus... 303 8e-81 UniRef50_C9RJK6 Proton-translocating NADH-quinone oxidoreductase... 303 8e-81 UniRef50_B1ZSE3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus te... 303 1e-80 UniRef50_A8H7R2 NADH dehydrogenase (Quinone) n=8 Tax=Proteobacte... 303 1e-80 UniRef50_B8I2P9 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 303 1e-80 UniRef50_Q0W2B5 Hydrogenase, membrane subunit 4-like protein (Hy... 303 1e-80 UniRef50_B1ZSD9 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria Re... 302 2e-80 UniRef50_A9A3Z6 Proton-translocating NADH-quinone oxidoreductase... 302 2e-80 UniRef50_B2V8R6 NADH dehydrogenase (Quinone) n=1 Tax=Sulfurihydr... 302 3e-80 UniRef50_UPI00016C46D7 NADH dehydrogenase I chain L n=1 Tax=Gemm... 301 4e-80 UniRef50_A9QPJ4 Formate hydrogenlyase subunit 3 n=1 Tax=Methylac... 301 4e-80 UniRef50_C7NST6 NADH dehydrogenase (Quinone) n=4 Tax=Halobacteri... 301 5e-80 UniRef50_B6YTY8 Membrane bound hydrogenase, MbhH subunit n=9 Tax... 301 5e-80 UniRef50_B6AS28 NADH dehydrogenase (Quinone) n=3 Tax=Leptospiril... 301 5e-80 UniRef50_C5NVG1 Na(+)/H(+) antiporter subunit A n=1 Tax=Gemella ... 300 7e-80 UniRef50_Q28L00 NADH dehydrogenase (Quinone) n=1 Tax=Jannaschia ... 300 1e-79 UniRef50_UPI00005100B6 putative monovalent cation/H+ antiporter ... 299 1e-79 UniRef50_B0VE74 pH adaptation potassium efflux system transmembr... 299 1e-79 UniRef50_P23482 Hydrogenase-4 component B n=69 Tax=Bacteria RepI... 299 1e-79 UniRef50_A6G6F5 NADH dehydrogenase/oxidoreductase n=1 Tax=Plesio... 299 1e-79 UniRef50_Q21AT7 NADH dehydrogenase (Quinone) n=16 Tax=Alphaprote... 299 2e-79 UniRef50_D0LWA1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 299 2e-79 UniRef50_Q6L0I7 NADH-quinone oxidoreductase chain L n=1 Tax=Picr... 299 2e-79 UniRef50_Q6APE8 Probable hydrogenase, component B-formate hydrog... 299 2e-79 UniRef50_Q2RXM6 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospiril... 298 2e-79 UniRef50_A7JYE5 Na(+) H(+) antiporter subunit D n=3 Tax=Vibrio R... 298 3e-79 UniRef50_B0R3U9 NADH dehydrogenase-like complex subunit L n=9 Ta... 298 3e-79 UniRef50_D2QRI2 Proton-translocating NADH-quinone oxidoreductase... 298 3e-79 UniRef50_D2LKE4 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 298 5e-79 UniRef50_C7MLM1 Formate hydrogenlyase subunit 3/multisubunit Na+... 297 5e-79 UniRef50_A6DPK7 NADH-ubiquinone/plastoquinone family protein n=1... 297 5e-79 UniRef50_A6DPK4 NADH-Ubiquinone/plastoquinone (Complex I), vario... 297 5e-79 UniRef50_B5YKQ9 Hydrogenase 4, component B or formate hydrogen l... 297 6e-79 UniRef50_Q466B6 F420H2 dehydrogenase subunit L n=5 Tax=Methanosa... 297 6e-79 UniRef50_C4LLM4 Na(+)/H(+) antiporter subunit n=3 Tax=Corynebact... 297 7e-79 UniRef50_B6YTW6 Hydrogenase 4, component B or formate hydrogen l... 297 8e-79 UniRef50_C0GRM0 Proton-translocating NADH-quinone oxidoreductase... 297 8e-79 UniRef50_C0QBF6 HyfF n=1 Tax=Desulfobacterium autotrophicum HRM2... 297 9e-79 UniRef50_D1C6X8 Proton-translocating NADH-quinone oxidoreductase... 297 9e-79 UniRef50_C8PJ79 ATP-binding protein n=1 Tax=Campylobacter gracil... 297 1e-78 UniRef50_A5G8U2 NADH dehydrogenase (Quinone) n=13 Tax=Desulfurom... 296 1e-78 UniRef50_C0A4J1 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae... 296 1e-78 UniRef50_Q2RUH4 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteo... 296 1e-78 UniRef50_Q1PZK0 Similar to membrane-bound [NiFe]-hydrogenase-3, ... 296 2e-78 UniRef50_D2LH97 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 296 2e-78 UniRef50_A7GWM7 ATP-binding protein n=4 Tax=Epsilonproteobacteri... 296 2e-78 UniRef50_C0GJ41 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacte... 295 3e-78 UniRef50_B9L177 Nadh-quinone oxidoreductase chain m n=1 Tax=Ther... 295 3e-78 UniRef50_C8NL94 NADH dehydrogenase (Quinone) n=18 Tax=Bacteria R... 295 3e-78 UniRef50_C5EMF1 NADH dehydrogenase n=2 Tax=Clostridiales RepID=C... 295 3e-78 UniRef50_C5C4D6 NADH dehydrogenase (Quinone) n=2 Tax=Micrococcin... 294 4e-78 UniRef50_A9B6Y1 Proton-translocating NADH-quinone oxidoreductase... 294 5e-78 UniRef50_A1ALK0 NADH dehydrogenase (Quinone) n=2 Tax=Pelobacter ... 294 5e-78 UniRef50_Q0ARA4 NADH dehydrogenase (Quinone) n=3 Tax=Hyphomonada... 294 6e-78 UniRef50_Q2FKT7 NADH dehydrogenase (Quinone) n=1 Tax=Methanospir... 294 6e-78 UniRef50_Q67P11 NADH dehydrogenase I subunit L n=1 Tax=Symbiobac... 294 6e-78 UniRef50_D2R5F8 Proton-translocating NADH-quinone oxidoreductase... 294 6e-78 UniRef50_A5UV30 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria Re... 294 7e-78 UniRef50_A9WT02 Potassium efflux system protein n=8 Tax=Actinomy... 293 8e-78 UniRef50_Q1QZ48 NADH dehydrogenase (Quinone) n=15 Tax=cellular o... 293 8e-78 UniRef50_B9LT20 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 293 1e-77 UniRef50_A0M796 Na(+)/H(+) antiporter subunit A n=5 Tax=Bacteroi... 293 1e-77 UniRef50_B3QPF9 NADH dehydrogenase (Quinone) n=1 Tax=Chlorobacul... 292 2e-77 UniRef50_B7GME2 NADH dehydrogenase subunit M n=6 Tax=Bacillaceae... 292 2e-77 UniRef50_B6J444 Sodium/proton antiporter protein n=5 Tax=Coxiell... 292 2e-77 UniRef50_C5A4P9 Membrane bound oxidoreductase, MbxH subunit (Mbx... 292 2e-77 UniRef50_A2T411 NADH-ubiquinone oxidoreductase chain 5 n=7 Tax=M... 292 2e-77 Sequences not found previously or not previously below threshold: UniRef50_A9EX64 NADH dehydrogenase (Ubiquinone) n=3 Tax=cellular... 331 5e-89 UniRef50_Q1RKE6 NADH-quinone oxidoreductase subunit L n=15 Tax=R... 328 4e-88 UniRef50_D0D447 NADH-quinone oxidoreductase subunit l n=65 Tax=c... 328 4e-88 UniRef50_P50939 NADH-quinone oxidoreductase subunit L n=36 Tax=c... 325 2e-87 UniRef50_B0SZ37 Proton-translocating NADH-quinone oxidoreductase... 312 2e-83 UniRef50_Q34313 NADH-ubiquinone oxidoreductase chain 5 n=6 Tax=E... 305 3e-81 UniRef50_C6XJX2 Proton-translocating NADH-quinone oxidoreductase... 304 5e-81 UniRef50_C7NIQ7 NADH:ubiquinone oxidoreductase subunit 5 (Chain ... 303 7e-81 UniRef50_Q2C5U2 NADH-plastoquinone oxidoreductase, chain 5 n=2 T... 303 9e-81 UniRef50_B4RCL7 NADH dehydrogenase I, L subunit n=9 Tax=Proteoba... 302 2e-80 UniRef50_D0LZ06 Proton-translocating NADH-quinone oxidoreductase... 301 4e-80 UniRef50_C2KMP0 NADH dehydrogenase (Quinone) n=2 Tax=Mobiluncus ... 299 1e-79 UniRef50_Q67KP4 NADH dehydrogenase I subunit L n=1 Tax=Symbiobac... 298 3e-79 UniRef50_Q9HJK6 NADH dehydrogenase, chain L related protein n=6 ... 298 3e-79 UniRef50_C0WGQ4 CPA3 family monovalent cation:proton (H+) antipo... 298 3e-79 UniRef50_B3QY39 Proton-translocating NADH-quinone oxidoreductase... 297 5e-79 UniRef50_C2BM70 CPA3 family monovalent cation:proton (H+) antipo... 297 6e-79 UniRef50_Q47T29 NADH dehydrogenase (Quinone) n=4 Tax=Actinomycet... 297 7e-79 UniRef50_Q0C1D3 NADH-quinone oxidoreductase, L subunit n=4 Tax=c... 297 1e-78 UniRef50_A0B819 F420H2 dehydrogenase subunit M n=2 Tax=Methanosa... 294 6e-78 UniRef50_Q35099 NADH-ubiquinone oxidoreductase chain 5 n=58 Tax=... 294 7e-78 UniRef50_P29388 NADH-ubiquinone oxidoreductase chain 5 n=133 Tax... 292 2e-77 >UniRef50_P77437 Hydrogenase-4 component F n=52 Tax=Bacteria RepID=HYFF_ECOLI Length = 526 Score = 534 bits (1377), Expect = e-150, Method: Composition-based stats. Identities = 526/526 (100%), Positives = 526/526 (100%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA Sbjct: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH Sbjct: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL Sbjct: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA Sbjct: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA Sbjct: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN Sbjct: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 Query: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL Sbjct: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 Query: 421 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIP 480 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIP Sbjct: 421 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIP 480 Query: 481 QPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEKHSER 526 QPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEKHSER Sbjct: 481 QPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEKHSER 526 >UniRef50_A1JTZ4 Hydrogenase-4 component F n=19 Tax=Bacteria RepID=A1JTZ4_YERE8 Length = 545 Score = 429 bits (1105), Expect = e-119, Method: Composition-based stats. Identities = 352/521 (67%), Positives = 415/521 (79%), Gaps = 1/521 (0%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 MS + + LLL PL+ SLL FACR +A T +H GI+LLLI+AL VV A Sbjct: 1 MSNTDLLLLLLAIPLIASLLAFACRALGSAARMATTWVHFAGISLLLIVALTVVCRVAVG 60 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 GEI A WLHID L LFLAILGVIGF+TG+YS+GYMRHEV +GE++ TLC+YYGFFH Sbjct: 61 GEILAVHHWLHIDSLSALFLAILGVIGFITGLYSLGYMRHEVNNGEITVSTLCNYYGFFH 120 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 LFLFTMLLVVTSNNLI+MW IEATTLSSAFLVG+YGQRSSLEAAWKYIIICTVGVAFGL Sbjct: 121 LFLFTMLLVVTSNNLILMWVGIEATTLSSAFLVGLYGQRSSLEAAWKYIIICTVGVAFGL 180 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 +GTVLVYANAA+V+ AIFW+ V + + LDP+LM LAFVF+LIGFGTKTGLFPMH+ Sbjct: 181 YGTVLVYANAANVLADPSSAIFWTVVAEHAKELDPSLMHLAFVFILIGFGTKTGLFPMHS 240 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 WLPDAHSEAPSP SALLSAVLLNCALLV+IRYYIII AIG FP LLL+FGM+SVAV+ Sbjct: 241 WLPDAHSEAPSPTSALLSAVLLNCALLVIIRYYIIISAAIGPHFPQMLLLVFGMMSVAVS 300 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 AFFIL QRD+KRLLAYSSVENMGL+AV LGIGGPLG+ AAL H +NHSLAKTLLFCGSGN Sbjct: 301 AFFILAQRDMKRLLAYSSVENMGLIAVALGIGGPLGVLAALFHTMNHSLAKTLLFCGSGN 360 Query: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 VLLKYGTRD+ + G++++ P TAV+ GGALALAGMPPFN+F+SEFM + A + H+ Sbjct: 361 VLLKYGTRDMGAIKGIIRVAPLTAVMLAGGALALAGMPPFNVFISEFMVVAAAIKTGHIT 420 Query: 421 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIP 480 ++++LLLLLTLVLAGLVRM A ++ PP AV++G+LG LTT+PM ILL++ML +G HIP Sbjct: 421 LVIVLLLLLTLVLAGLVRMIASTVLGTPPTAVSKGELGILTTAPMAILLLLMLLLGVHIP 480 Query: 481 QPVIRILAGASTIVLSGTHDLPAQRSTWHDF-LPSGTASVS 520 PV R+L A+ IVL+ P Q + LPS +S Sbjct: 481 TPVTRLLTDAAQIVLNNDSRDPIQPPFMLPWQLPSPIKDIS 521 >UniRef50_C7MLM5 Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=4 Tax=Bacteria RepID=C7MLM5_CRYCD Length = 533 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 250/508 (49%), Positives = 339/508 (66%), Gaps = 2/508 (0%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M +S + L+ PL+ L + + +H L +T +L+L VV Sbjct: 1 MDFSALLLTLIAVPLVAGLFMAVLPSKAV-PRVAYEAIHLLSVTAACVLSLAVVVHVMAG 59 Query: 61 G-EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 G + A G+WLH+D LG +F+A++GVIGFLTG+YS+ Y+R++VA G ++ + +Y FF Sbjct: 60 GKPVDALGMWLHLDALGSVFVALIGVIGFLTGLYSVPYVRNDVAIGHMNNARVKQFYLFF 119 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFG 179 LF+FTML+V TSNN+I+MW IEATTLS+ FLVG Y + SLEAAWKY+I+CT GVAFG Sbjct: 120 SLFIFTMLVVATSNNIILMWVGIEATTLSTVFLVGAYDAKLSLEAAWKYVIVCTAGVAFG 179 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L+ TVL+YANAA VM AIF + ++ ++ LD L+ +AFVF IGFGTK GLFPMH Sbjct: 180 LYSTVLIYANAADVMANPHEAIFMTSIMPYATQLDGMLVQVAFVFAAIGFGTKAGLFPMH 239 Query: 240 AWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLPDAHSEAPSPVS LLS VLL CA+L+++R+YI+ CQ+IGS FP ++LI G+LSV + Sbjct: 240 TWLPDAHSEAPSPVSGLLSGVLLKCAMLIIMRFYILACQSIGSQFPRLVMLIIGILSVFM 299 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 AA + Q D+KR LAY S EN+G+VA+ LG GGPLGI AALLH + H K LLFC SG Sbjct: 300 AALAVFSQDDLKRKLAYHSCENVGIVALFLGFGGPLGIAAALLHCITHGFTKALLFCISG 359 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 NVL+KYGTRDLN + G+LK MP T VL G ALAG PPF +F+SE ITAG+ Sbjct: 360 NVLMKYGTRDLNKISGILKTMPATGVLMSIGFFALAGFPPFAMFVSEITGITAGVIEGQW 419 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHI 479 +IV+ ++ LT+V+A + + +M K P+ + +GD+ + P V+L+ ++L G + Sbjct: 420 FVIVVFVIALTIVVAACAHVVTQAVMGKVPEGMKKGDVSPVALIPEVVLVALILWFGVAM 479 Query: 480 PQPVIRILAGASTIVLSGTHDLPAQRST 507 PQPV+ + A+ IVL + Sbjct: 480 PQPVLNGIEQATAIVLQQDDTAALHEAP 507 >UniRef50_A4E716 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E716_9ACTN Length = 521 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 233/522 (44%), Positives = 332/522 (63%), Gaps = 4/522 (0%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M S++ LL PL+FSL+ A K ++ L+++ + L+L++ T + Sbjct: 1 MDVSMLTVALLACPLVFSLIMAALPK--TTSYSVFAGLNTISVAATLVLSVVTAGTMLSS 58 Query: 61 GE-IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 G+ I A GLWLH+D L +F+ ++G+IGF+TG+YSI Y++ ++ + YY F Sbjct: 59 GQNIDALGLWLHLDSLSSIFVLLVGIIGFITGVYSISYIKIDIKEKTMPAERTKQYYALF 118 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFG 179 LF+FTMLL SNN+I+ WAA+EATTLS+ FLVGIY + +LEA+WKY ++CT GVAFG Sbjct: 119 SLFVFTMLLACLSNNIILTWAAVEATTLSTVFLVGIYKNKQALEASWKYAMVCTAGVAFG 178 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 LFGT+L+YANAA +MP A A F + ++ + DP L+ LAF F++IGFGTK GLFPMH Sbjct: 179 LFGTLLIYANAADIMPNAHEAAFLTSIMPYADQFDPMLVRLAFAFIVIGFGTKAGLFPMH 238 Query: 240 AWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLPDAHS+APSPVSALLS VLL CA+LV+IR+Y + +G +P LLLI G LS+ V Sbjct: 239 TWLPDAHSQAPSPVSALLSGVLLKCAMLVIIRFYSLSIITVGDTYPRTLLLILGTLSILV 298 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 AA I Q DIKR AYSSV+N+G+VA+ LGIGGPLGI A LLH + H K L FC +G Sbjct: 299 AALCIFKQDDIKRRFAYSSVDNVGVVALCLGIGGPLGIAACLLHCIFHGFTKALAFCMAG 358 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 N+ Y TRDLN + G+++I P TA L LALA PPF +F+SEF+T AG+ + Sbjct: 359 NIQHIYHTRDLNKIKGVVEIAPVTAALTIIALLALAAFPPFALFISEFLTFVAGIQSGPI 418 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHI 479 ++VL+ + LT V L +A + + K P+ + R ++ L P + L ++++ G Sbjct: 419 WVVVLVAIGLTGVYFALTGIALKSIFGKAPEGMKRHEVPALMIIPEIALAIVVMWFGIAT 478 Query: 480 PQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSE 521 P + + A+++VL+ + + + + + S SE Sbjct: 479 PVAITSGVEDATSVVLNQSVE-ELHEAPLYRMVFSSQTKTSE 519 >UniRef50_Q0W2B8 Hydrogenase, membrane subunit 1-like protein (EchA-like) n=2 Tax=cellular organisms RepID=Q0W2B8_UNCMA Length = 487 Score = 366 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 220/490 (44%), Positives = 334/490 (68%), Gaps = 7/490 (1%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF 64 ++ LL+ PL+ + LC+ + +R TV ++ +LG ++ +++ T G + Sbjct: 1 MIIETLLIIPLITAALCYLIKHKR-----TVEIVSTLGALAIMAGCVYLAYTVFTRGPV- 54 Query: 65 AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLF 124 +G ++D LG L I+ IG IYSIGY+ +E ++ L Y+ FFH+F+F Sbjct: 55 -SGGLWYVDSLGAYMLVIISFIGLAAAIYSIGYLGYEYKEKKIDLGRLRYYFTFFHVFIF 113 Query: 125 TMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTV 184 TMLLV TS+NL +MW AIEATTL+SAFLVG Y + +S+EAAWKYIIIC+VG+ L GT+ Sbjct: 114 TMLLVCTSSNLGIMWIAIEATTLASAFLVGFYNKDTSVEAAWKYIIICSVGITLALLGTI 173 Query: 185 LVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 L+YA++ + + ++ A+ W + +++ LDPTL+ +AF+ ++IG+GTK G PMH WLPD Sbjct: 174 LLYASSVNTLGESADALNWPMLAEKAKSLDPTLLKIAFILVIIGYGTKAGFAPMHTWLPD 233 Query: 245 AHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFI 304 AHSEAP+P+S LLS VLLNCA+ ++RY+II A+G DF LL++FG+LS+A AA FI Sbjct: 234 AHSEAPTPISGLLSGVLLNCAMYGILRYHIITTNALGPDFSGTLLIVFGLLSLAAAAAFI 293 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK 364 ++Q+D KRLLAYSS+E+MG++A+ GIGG +GIF ALLHILNH++ K+L+F G+GN+LLK Sbjct: 294 IIQKDYKRLLAYSSIEHMGIIAIGFGIGGAVGIFGALLHILNHAVTKSLMFFGAGNILLK 353 Query: 365 YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVL 424 + T++++ V G+ +MP+TA+ F GALA+ G PPF+IF+SE + + AG + ++++ VL Sbjct: 354 FKTKNIDEVKGIAALMPWTAMCFVAGALAITGSPPFSIFVSEIIILIAGFTQGNIVVSVL 413 Query: 425 LLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVI 484 LLLL ++ AG + R++ +P +G+ +L M +LL+ L MG ++P + Sbjct: 414 YLLLLVIIFAGFMYHVGRMVFGEPAPGTIKGEPNYLGLCVMAVLLLATLIMGVYVPLALS 473 Query: 485 RILAGASTIV 494 IL TI Sbjct: 474 DILTQIVTIF 483 >UniRef50_UPI00003837CC COG1009: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003837CC Length = 758 Score = 361 bits (926), Expect = 5e-98, Method: Composition-based stats. Identities = 147/537 (27%), Positives = 246/537 (45%), Gaps = 36/537 (6%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRR---LSATRTVTVLHSLGITLLLILALWVVQTA 57 MS + + A + P L S+L A R +A + L SLG L L L + Sbjct: 1 MSSNTLLAAAAILPFLGSVLAGALPSRARNVAAALAGLVTLTSLGCILALTPQLAGGSSV 60 Query: 58 ADAGEIFA---AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 A + L +DGL LF ++ IG L +Y+ YM + Sbjct: 61 VHAIDWLPSLGVRFVLRLDGLAWLFSVLVLAIGALVVLYARYYMS--------PADPVPR 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICT 173 + +F F+ ML ++ S NLI + E T++ S L+G + ++ A + I Sbjct: 113 LFAYFLAFVGAMLGIILSGNLIQLVLFWELTSIVSFLLIGYWYDNAAARDGARMSLTITA 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 G L GT+L+ S + +A ++ + +L L A V +L G TK+ Sbjct: 173 AGGLCLLVGTILIGRIVGSYDLETVLA-------SGDTIRNSSLYLPALVLVLAGALTKS 225 Query: 234 GLFPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 FP H WLP A + AP+P+SA L SA ++ + ++IR + ++ G+D ++ Sbjct: 226 AQFPFHIWLPRAMA-APTPISAYLHSATMVKAGIFLMIRLWPVLA---GTDAWYWIVGTI 281 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 GM ++ + ++ + Q D+K LLAYS++ ++GL+ + LG+ PL + AA+ H +NH+ K Sbjct: 282 GMATMLIGSWSAIFQHDLKGLLAYSTISHLGLITLLLGLDSPLAVVAAIFHTVNHATFKA 341 Query: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LF G + + GTRD+ + G+ + MP+TA L A A+AG+P N FLS+ M ++ Sbjct: 342 SLFMAVGIIDHETGTRDMRRLSGLWRAMPYTATLAMVAAAAMAGVPLLNGFLSKEMFLSE 401 Query: 413 GLARN-----HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV--NRGDLGWLTTSPM 465 + HL + VL L + +R + +PP + + P+ Sbjct: 402 AVDNMGDHPIHLALPVLATLASAFTMLYSLRFIRQTFFGRPPHDLPEEPHEPVRWMRIPI 461 Query: 466 VILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDF-LPSGTASVSE 521 +L++ +A+G + L A VL G P + WH F P + V+ Sbjct: 462 EMLVLTCIAIGLVPNLTIGPALGRAVRAVL-GDATPPYSLAIWHGFNAPLAMSVVAM 517 >UniRef50_B8I2P6 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Clostridium RepID=B8I2P6_CLOCE Length = 495 Score = 360 bits (925), Expect = 7e-98, Method: Composition-based stats. Identities = 188/494 (38%), Positives = 304/494 (61%), Gaps = 5/494 (1%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 M A ++ P+L L + + + + ++ + G+ +L IL+L + Sbjct: 1 MIAAFVVIPVLAGGLVWISKNKFF--IHAINLIGASGLLVLSILSLININKYKVISSSGL 58 Query: 66 AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFT 125 ++D L G L I + FL +YSI Y E+ + ++ L YY + F+ + Sbjct: 59 FKNIFYMDSLSGYILFITTLAFFLVSLYSISYFGQELKNKVITIRKLKLYYSLSNAFVLS 118 Query: 126 MLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVL 185 M+L +T+ N+ VMW +IEATTL+SAFLVG Y + ++EAAWKY+IIC+VG+ F L G +L Sbjct: 119 MILALTTRNMGVMWISIEATTLASAFLVGFYNNKRAIEAAWKYLIICSVGITFALLGIIL 178 Query: 186 VYANAASVMPQAEMA-IFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 ++ ++ + A ++ + WS ++K +S LDP+++ +AF+F+LIGFGTK G PMH WLPD Sbjct: 179 LFYSSTVKLGGARISGMDWSYLIKYASALDPSILKIAFIFILIGFGTKVGFSPMHTWLPD 238 Query: 245 AHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD-FPNRLLLIFGMLSVAVAAFF 303 AHS+APSPVSALLS VLLN A+ +IR I+ + +GS + LL++ +LS+ AA F Sbjct: 239 AHSQAPSPVSALLSGVLLNTAMYGVIRVMSIVNKCLGSSNYTGNLLIVLSVLSIGTAAVF 298 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLL 363 ILVQ+D KR+LAYSS+E+MG++A+ LG+ P+ IFAAL H NH++ K +LF +GNV L Sbjct: 299 ILVQQDYKRILAYSSIEHMGIIALGLGVCTPISIFAALYHTFNHAMTKLMLFLATGNVYL 358 Query: 364 KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIV 423 K+ T+ ++ + G++K MP T ++F G A+ GMPPF +F+SEF T+ + ++ Sbjct: 359 KHHTKKISSIRGLIKTMPVTGIVFVLGTFAITGMPPFGVFMSEFNTVVGTIFSKRYIVTA 418 Query: 424 LLLLLLTLVLAGLVRMAARVLMAKPPQ-AVNRGDLGWLTTSPMVILLVMMLAMGTHIPQP 482 LLL+ L++V AG + ++ + +G++ + + ++ILL + + G +IP P Sbjct: 419 LLLIFLSMVFAGFTKQLGKMFYGNNSNPQIKKGEIDIIGPAVLIILLCITVLAGIYIPVP 478 Query: 483 VIRILAGASTIVLS 496 ++ + I+L Sbjct: 479 FKELMENTTDIILG 492 >UniRef50_B9XHI6 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Verrucomicrobia RepID=B9XHI6_9BACT Length = 636 Score = 360 bits (924), Expect = 8e-98, Method: Composition-based stats. Identities = 119/488 (24%), Positives = 216/488 (44%), Gaps = 36/488 (7%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA-- 65 L+L PL+ L + + + + + L+ ++ + F Sbjct: 11 WLILFLPLVSVALISLIPGIKSRPRVSAQISIAAVVVCFLLTSILYFVLQNSGQQQFPQI 70 Query: 66 -----------AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 + L +D L + + I+ +G L I+S YM+ + + Sbjct: 71 TATWLQVDYLRIDIGLKLDALSMMMMLIVTGVGGLIHIFSWEYMKGDPGY--------SR 122 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICT 173 Y+ LF+F+ML +V ++N ++M+ E +SS L+G + +R + +A K + Sbjct: 123 YFACLSLFIFSMLGIVMADNFLMMFIFWELVGISSYLLIGFWYERPSAADACKKAFLTNR 182 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 +G L G +LV+A + + + L + +L + A + + G K+ Sbjct: 183 LGDFGFLVGILLVWATLGHRLNFDAL----KQYLDKHTLEFAGVATAAGLLVFCGAAGKS 238 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 FP+H WLPDA E P+PVSAL+ A ++ + +L R Y ++ + ++ Sbjct: 239 AQFPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYMLCRIYFLL--DVSGSHALEVIAWI 295 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G ++ +AA + Q DIKR+LAYS++ +G + + +G GP A+ H+ H+ K Sbjct: 296 GGITALLAAVIAIQQNDIKRILAYSTLSQLGYMVMAVGTHGP---TPAMFHLTTHAFFKA 352 Query: 353 LLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 LLF G+G V+ + +++ + + K MP T V F G LALAG PP + F S+ + Sbjct: 353 LLFLGAGAVIHAVHHEQNIWKMGALRKKMPTTFVTFTIGTLALAGCPPLSGFYSKDGILG 412 Query: 412 AGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP--PQAVNRGDLGWLTTSPMVILL 469 + +H + +L LL L + R+ P A + + + P++IL Sbjct: 413 QAMETHHYGLFILGLLAAILTTFYMFRLVFVAFYGAPRSEAADHAHEAPGMLKWPLIILA 472 Query: 470 VMMLAMGT 477 V G Sbjct: 473 VFSFIGGV 480 >UniRef50_Q1IS54 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Acidobacteria RepID=Q1IS54_ACIBL Length = 710 Score = 351 bits (901), Expect = 5e-95, Method: Composition-based stats. Identities = 122/437 (27%), Positives = 198/437 (45%), Gaps = 29/437 (6%) Query: 50 ALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSP 109 L +TA+ A F A +D L ++L + +G L IYS GYM+H+ + Sbjct: 83 GLMTFKTASGATAEFKAEAGFLLDPLSSIWLLFVTGVGMLIHIYSTGYMKHDGGY----- 137 Query: 110 VTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKY 168 ++G+ +LF+F+ML ++ NN +M+ E L S L+G Y + S AA K Sbjct: 138 ---YRFFGYLNLFMFSMLTLILGNNYAMMFVGWEGVGLCSYLLIGFYFHKKSASTAANKA 194 Query: 169 IIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIG 228 I +G A L G + S+ S + + A + L IG Sbjct: 195 FITNRIGDAGVLVGMFTIAWYFGSINFTKVTQAARSGIFHTGDY----WITFATIALFIG 250 Query: 229 FGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNR 287 K+ P++ WLPDA E P+PVSAL+ A ++ + ++ R + A S + Sbjct: 251 ACGKSAQLPLYVWLPDAM-EGPTPVSALIHAATMVTAGVYMVARSNALYILAPNS---MK 306 Query: 288 LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNH 347 ++ I G L+ AA LVQ DIKR+LAYS+V +G + + LG+G A + H+ H Sbjct: 307 VVAIVGALTAVFAASIGLVQNDIKRVLAYSTVSQLGYMFLALGLG---AFTAGVFHVFTH 363 Query: 348 SLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 + K LLF GSG+V+ G +D+ + + K +P T G LA+AG+PP F S+ Sbjct: 364 AFFKALLFLGSGSVIHAMSGEQDMRFMGALRKKIPVTFWTMFAGTLAIAGIPPLAGFFSK 423 Query: 407 FMTITAGLARN---HLLIIVLLLLLLTLVLAGLVRMAARVLMAKP----PQAVNRGDLGW 459 + + N ++ + L + + R+ +P + + Sbjct: 424 DEILWQAWSSNGGTFRVLWGIGFLTALMTSLYMFRLVYLTFFGQPRMSHEVEHHVHESPK 483 Query: 460 LTTSPMVILLVMMLAMG 476 T P+VIL + + G Sbjct: 484 SMTGPLVILAICAVFAG 500 >UniRef50_B3EIA1 Proton-translocating NADH-quinone oxidoreductase, chain L n=27 Tax=cellular organisms RepID=B3EIA1_CHLL2 Length = 770 Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 130/539 (24%), Positives = 224/539 (41%), Gaps = 78/539 (14%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA--- 57 M + ++ +L L S + +RL + LG T L L ++ Sbjct: 1 MHSLIQLSIAVLLLPLLSFVILIFFNKRLPRRGDFIGVGILGTTFALSLYIFWSVVVQAY 60 Query: 58 ------------ADAGEIFAAG-----LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRH 100 D G + G + + ID L + LA++ +I FL +YS GYM Sbjct: 61 DPAFRVAWDFTWIDLGNVPGVGPLVIKMGIVIDNLTAIMLAMVTLISFLVHLYSTGYMAG 120 Query: 101 EVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS 160 + +G ++ + +F F+ML +V S+NL ++ E LSS L+G Y ++ Sbjct: 121 DPRYG--------RFFAYLGIFTFSMLGIVLSDNLFAIYIFWELVGLSSYLLIGFYFEKD 172 Query: 161 SLEAA-WKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLML 219 S A K + VG G +++Y+ + Q A + + + Sbjct: 173 SAADAQKKAFLANRVGDIGMWLGILILYSQFHTFSYQEIFANLAAGKFG----MSQAWLT 228 Query: 220 LAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQ 278 A + L +G K+ FP+H WLPDA E P+PVSAL+ A ++ + + R ++++ Sbjct: 229 AAGILLFMGCVGKSAQFPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYFVARIFVLLTA 287 Query: 279 AIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIF 338 ++ G + +AA + Q DIKR+LAYS+V +G + + LG+G Sbjct: 288 D-----ALHVIAFIGAFTAFMAATIAITQHDIKRVLAYSTVSQLGYMVLGLGVG---AYS 339 Query: 339 AALLHILNHSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGM 397 AAL H++ H+ K LF GSG ++ + +D+ + G+ K MP+T F LALAG+ Sbjct: 340 AALFHLVTHAFFKACLFLGSGAIIHAMHHEQDMRWMGGLRKNMPWTFATFTLATLALAGL 399 Query: 398 PPFNIFLSEFMTITAGLARN-------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKP-- 448 P + F+S+ + + + LI L L + R V + Sbjct: 400 PLTSGFMSKDAILAGAIGFANAEGGGIYYLIPFLGFFSAMLTAFYMGRQIWLVFFGESRT 459 Query: 449 ------------------------PQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPV 483 +A ++ W +P+VIL + + + P P+ Sbjct: 460 HLKPADDHHHGHDAHAAHGHDDHHEEAHGVHEVAWNMRTPLVILAALSI-FAVYSPDPL 517 >UniRef50_B1WQD4 NADH dehydrogenase subunit 5 n=9 Tax=Cyanobacteria RepID=B1WQD4_CYAA5 Length = 682 Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 124/466 (26%), Positives = 208/466 (44%), Gaps = 45/466 (9%) Query: 8 ALLLLTPLLFS------LLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQ-----T 56 L+ + PLL + L+ F RL V ++ LG +++L AL Q T Sbjct: 9 WLIPVLPLLGAMVVGLGLISFNQVTNRLRQANAVFIISLLGASMVLSFALLWSQIQGHET 68 Query: 57 AADAGEIFAAG-----LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 E AAG + +D L L I+ + FL +Y+ GYM H+ + Sbjct: 69 YTRMIEWAAAGNFHLQMGYTLDHLSALMCVIVTTVAFLVMVYTDGYMAHDPGY------- 121 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYII 170 +Y + +F +ML +V S NL+ ++ E + S L+G + R ++ +A K + Sbjct: 122 -VRFYAYLSIFSASMLGLVISPNLVQVYIFWELVGMCSYLLIGFWFDRKAAADACQKAFV 180 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 VG L G + +Y + + ++ E L S ++ P L L V + +G Sbjct: 181 TNRVGDFGLLLGMLGIYWATGTF--EFDLMGERLESLVSSGMIAPALAGLFAVLVFLGPV 238 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ FP+H WLPDA E P+P+SAL+ A ++ + ++ R Y + ++ Sbjct: 239 AKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARMYPVFEPI---PTAMTII 294 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 G ++ + A L Q DIK+ LAYS++ +G + + +GIG A L H++ H+ Sbjct: 295 AWTGAVTSFLGATIALTQNDIKKGLAYSTISQLGYMVMAMGIG---AYTAGLFHLMTHAY 351 Query: 350 AKTLLFCGSGNVLLKYG---------TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 K +LF SG+V+ +D+ ++ G+ K MP T++ F G LA+ G+PPF Sbjct: 352 FKAMLFLCSGSVIHGMEGVVGHDPVLAQDMRLMGGLRKYMPLTSLAFLVGTLAICGIPPF 411 Query: 401 NIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA 446 F S+ + N L +V L + RM Sbjct: 412 AGFWSKDEILGLAFEANPALWLV-GWFTAGLTAFYMFRMYFMTFEG 456 >UniRef50_Q2RXM0 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM0_RHORT Length = 531 Score = 347 bits (892), Expect = 4e-94, Method: Composition-based stats. Identities = 159/458 (34%), Positives = 253/458 (55%), Gaps = 7/458 (1%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M+ S + LL L P L +++ + + R + +V +LG +A+ + A++ Sbjct: 1 MANSSLLLLLFLIPALGAVVEYPLGRARSALAGAPSVAGALG---AFAVAVTMAFRIAES 57 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 G++FA G W H D L + ++ +G ++SIGY+RHEV G+ S L Y+ Sbjct: 58 GDLFALGGWFHADALSAVVAIVVTFVGLAATLFSIGYLRHEVEAGQYSQTRLPVYFVLNS 117 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 +F+ TM V +NN+I+M+ +EATTL+SA LV Y + + EA +KY+++C+VG+ GL Sbjct: 118 VFIATMAAVTVTNNVIMMYVVVEATTLASALLVTYYRKPGAWEAGYKYLLLCSVGITMGL 177 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 G V++Y+ A ++ A+ SE+ + L PT +++ V ++IGFG+K GL P HA Sbjct: 178 LGCVILYSAAVPLLG-GHRAMQISELATVADQLPPTAVVVGCVLIIIGFGSKAGLIPFHA 236 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 WLPDAHS++PSPVSALLS V L A+ + R + G+ ++ G +++ Sbjct: 237 WLPDAHSQSPSPVSALLSGVTLKVAIYAIARIASLFYAGHGA--LGVFCIVLGAITMLGG 294 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 Q D+KRLLAYSSV +G + + LGIG LG + A+ H++NH+L K +LF +G Sbjct: 295 IIAAFSQTDLKRLLAYSSVSQVGYIIMGLGIGSYLGFYGAVYHLMNHALDKAMLFLCTGL 354 Query: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 +L GT + + G K P A+ F GALA++G+PP N F S+F TA + Sbjct: 355 LLYSCGTTSIEEL-GKRKHSPLVALCFFIGALAISGVPPLNGFWSKFAIYTAAAEAHLWW 413 Query: 421 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLG 458 + + LL + +A LVR + + D+ Sbjct: 414 ALGVALLTSLITIAVLVRAGYLIFLRNTDHDHGSTDVS 451 >UniRef50_B3QY40 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QY40_CHLT3 Length = 772 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 121/519 (23%), Positives = 214/519 (41%), Gaps = 65/519 (12%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL--------- 51 + +S++ LL L F + R+ V SL ++L + ++ Sbjct: 6 IQFSIITLLLPLLSFTFLIFFNGKLPRKGDFVGVGLVGISLALSLYIFTSVVFGEYDPNF 65 Query: 52 -------WVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAH 104 W+ + + ID L + L ++ +I FL I+S+GYM + + Sbjct: 66 KVGWSFTWLDFGNVPGVGPLTISMGILIDNLTAIMLVVVTLISFLVHIFSMGYMAGDKYY 125 Query: 105 GELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEA 164 G YY + +F F+ML +V S+NL ++ E LSS L+G + ++ S Sbjct: 126 G--------RYYAYLGIFTFSMLGIVLSDNLFSIYIFWELVGLSSYLLIGFFFEKDSAAD 177 Query: 165 A-WKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFV 223 A K + VG G +++Y+ + + + + + L + + Sbjct: 178 AQKKAFLTNRVGDIGMWLGILILYSQFHTFGYEE----IYQNIQDGNFTLSEAWLTAGGL 233 Query: 224 FLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGS 282 L +G K+ FP+H WLPDA E P+PVSAL+ A ++ + + R + I+ Sbjct: 234 LLFMGCVGKSAQFPLHIWLPDAM-EGPTPVSALIHAATMVAAGVYFVARIFPILSVD--- 289 Query: 283 DFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALL 342 ++ G + +AA + Q DIKR+LAYS++ +G + + +GIG A Sbjct: 290 --ALHVIAFIGAFTAFMAATIAITQHDIKRVLAYSTLSQLGYMVMGMGIG---AYAPAFF 344 Query: 343 HILNHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFN 401 H++ H+ K LF GSG V+ +D+ + G+ K MP+T F LAL+G+P + Sbjct: 345 HLVTHAFFKACLFLGSGAVIHATHHEQDMRWMGGLRKNMPWTFATFTIAMLALSGLPMTS 404 Query: 402 IFLSEFMTITAGL------ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRG 455 F+S+ + L + LI V L + R V + + Sbjct: 405 GFMSKDAILAGSLGFANVEGGFYYLIPVFGFGAAMLTAFYMGRQMWLVFFGENRAHLKPA 464 Query: 456 -------------------DLGWLTTSPMVILLVMMLAM 475 D+ W+ P+V+L + + Sbjct: 465 SHDDHHHGHDDHHGHHSVHDVDWVMRFPLVVLATLSVFF 503 >UniRef50_A6LXP7 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=cellular organisms RepID=A6LXP7_CLOB8 Length = 617 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 118/490 (24%), Positives = 222/490 (45%), Gaps = 36/490 (7%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTV---LHSLGITLLLILALWVVQTA 57 M + + ++ + P + L+ K+ + + + + S +L + + + + Sbjct: 1 MRFIDLAWMIPVFPAIAFLIIGFITKKSKVISSAIAIGGMVLSFIFSLGVFYEVITSKVS 60 Query: 58 ADAGEIFAAG---------LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 + +A + + ID L L I+ IG L IYS+GYM+ E Sbjct: 61 INKPVEYAVSWLSAPIKIEVGVLIDPLTATMLIIVTFIGLLVEIYSLGYMKGEKG----- 115 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWK 167 ++ LF +ML +V SNN M+ E L S L+G Y R +++A K Sbjct: 116 ---FSRFFANLSLFTSSMLGLVISNNYFQMFFFWELVGLCSYLLIGFYYDRPSAVKANKK 172 Query: 168 YIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLI 227 + VG L G + ++ + + A + D + + + + Sbjct: 173 AFVANRVGDFGFLVGMLCLFMAFGTFNFRELAASI-------PAYQDVVYLTIIALLIFA 225 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPN 286 G K+ FP+H WLPDA E P+PVSAL+ A ++ + +L R YI+ + Sbjct: 226 GPVAKSAQFPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYLLARGYILFSSL---HEVS 281 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 ++ G ++ +A +VQRD+KR+LA+S++ +G + + +G+G G + + H+ + Sbjct: 282 LVIAYIGGITAFMAGTIAIVQRDLKRILAFSTMSQLGYMVMAMGVG---GFTSGMFHLTS 338 Query: 347 HSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 H+ K LLF G+G+++ G +D+ + G++K M ++ F +L+LAG+PP + F S+ Sbjct: 339 HAFFKALLFLGAGSIIHSIGVQDIFKMGGLIKKMKLVSITFIIASLSLAGIPPLSGFFSK 398 Query: 407 FMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMV 466 +T ++ + L L+ L + R+ V + + + W T P++ Sbjct: 399 DEILTVTYEHGYIFLYYLGLITAFLTAFYMARLVLIVFFGEEREKHSVHKTPWCMTVPLI 458 Query: 467 ILLVMMLAMG 476 IL V + G Sbjct: 459 ILSVFSVFYG 468 >UniRef50_B0BZT2 Proton-translocating NAD(P)H-quinone oxidoreductase, chain L n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0BZT2_ACAM1 Length = 671 Score = 345 bits (887), Expect = 2e-93, Method: Composition-based stats. Identities = 118/481 (24%), Positives = 211/481 (43%), Gaps = 35/481 (7%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI---- 63 L+ L PL+ + R S + ++VL S+ + + + A WVV Sbjct: 6 YLIPLFPLIAFAVNLFFGHRLGSFSGWISVLTSVASSAIALPAAWVVAQGGQYSHEWLWL 65 Query: 64 ----FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 + +D L L ++ VIG L +YSIGYM E + ++ + Sbjct: 66 TLGNYDLNFGYLLDPLSATLLFVVTVIGTLIQVYSIGYMHGEKYYH--------RFFAYV 117 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAF 178 LF+ ML +V +NN + + A E L S L+G Y + + A+ K + VG Sbjct: 118 SLFMAAMLTLVIANNYVQYFMAWEVMGLCSYLLIGFYFHKDSAANASRKAFLTTRVGDVG 177 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 G + ++ ++ L + L+ LA + G K+ FP+ Sbjct: 178 LFLGIMTLFVTGGTLSFVD---------LPNAVETGAPLLWLAAPLIFCGTVGKSAQFPL 228 Query: 239 HAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSV 297 H WLPDA E P+PVSAL+ A ++ + ++ R +++ ++ G L+ Sbjct: 229 HVWLPDAM-EGPTPVSALIHAATMVAAGVYLVARSFVLFTS---FPMVMPWVMGIGTLTA 284 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 +AA+ L DIK++LA+S++ +G + +G+G G+ A H++ H+ K LLF G Sbjct: 285 FMAAYIALTATDIKKVLAFSTISQLGYMVTAMGLG---GMTAGTFHLMTHAFFKALLFLG 341 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 +G+V+ +D+ + G+ M T F +LA+AG+PP + F S+ + Sbjct: 342 AGSVIHGAHEQDIRQLGGLFSKMKHTGATFVIASLAIAGVPPLSGFWSKDEILLEAYQEG 401 Query: 418 HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ-AVNRGDLGWLTTSPMVILLVMMLAMG 476 H ++ +LLL + + R+ K ++ + L T P+ L + + +G Sbjct: 402 HFVVYGVLLLTAFMTAFYMFRLVFMTFFGKARNPEIHAHESPALMTVPLWCLAIGAIFVG 461 Query: 477 T 477 Sbjct: 462 I 462 >UniRef50_Q24ST7 Hydrogenase-4 component F n=3 Tax=Desulfitobacterium RepID=Q24ST7_DESHY Length = 499 Score = 343 bits (881), Expect = 9e-93, Method: Composition-based stats. Identities = 181/491 (36%), Positives = 286/491 (58%), Gaps = 1/491 (0%) Query: 15 LLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDG 74 + + A +++R + + +SL + LL LA ++ G G + D Sbjct: 2 FIVVAILAAFCMLISTSSRALRLFNSLALIALLGLAGEMILRVFGQGPQSIWGGFFSWDA 61 Query: 75 LGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNN 134 L L L ++ VI +YS YM HEVA G++ L YY + +F+ TML VV++ N Sbjct: 62 LSALLLGVIVVIAAYVIVYSFSYMEHEVAAGKVPQSRLPRYYFWVWMFIGTMLWVVSTPN 121 Query: 135 LIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVM 194 L ++W IE TTL++A LVG Y Q++++EAAWKYI++CTVG++F L GT+++YA + + Sbjct: 122 LGLLWVGIEGTTLATALLVGFYRQKTAVEAAWKYIVLCTVGISFALLGTMILYAASGRIN 181 Query: 195 PQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVS 254 + A+ W ++ + LDP L+ L +F IG+G K G PMH WLPDAHS+APSPVS Sbjct: 182 GYSLAALDWRLLVGMAPQLDPALVKLGCIFAFIGYGAKVGFVPMHPWLPDAHSQAPSPVS 241 Query: 255 ALLSAVLLNCALLVLIRYYIIICQ-AIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRL 313 ALLS VLLNCAL ++R++I++ Q +G DF +LLL+FG++S+ FIL+Q+DIKRL Sbjct: 242 ALLSGVLLNCALYAILRWHILVRQTGLGPDFSGKLLLVFGLISLGAMMAFILLQKDIKRL 301 Query: 314 LAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVV 373 LAYSSVE+MG++A+ LG+G PL ++ A H++ H+L K LF G V+ GTR + + Sbjct: 302 LAYSSVEHMGIIALGLGLGTPLAVWGACFHLILHALTKANLFVVVGRVVQMMGTRQIPKI 361 Query: 374 CGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVL 433 G++ + P+T + G LA+ GMPPF F SE + +H ++ L L L ++ Sbjct: 362 RGVMSLWPYTGGILFMGLLAITGMPPFGTFRSEISIMAGFFQNHHPILGFLTALFLAVIF 421 Query: 434 AGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTI 493 AG + +L P + + + + ++++L +G +P+P+ + L + Sbjct: 422 AGFLYHFLGMLFGTPGERCLKDKGEGKEVLWLAVPMILVLMLGVFVPEPLNQALNQVVEL 481 Query: 494 VLSGTHDLPAQ 504 +L + Sbjct: 482 ILGRGGEYGEF 492 >UniRef50_Q1H3T5 NADH dehydrogenase (Quinone) n=12 Tax=Proteobacteria RepID=Q1H3T5_METFK Length = 966 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 134/525 (25%), Positives = 236/525 (44%), Gaps = 39/525 (7%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLL---ILALW----VVQTAAD 59 A L L P + ++ + ++ V +L ++ LL + W V+Q Sbjct: 3 LAYLTLIPFIGAIFTKLSTRLGRYSSAWVAILSAMLSLFLLWPLAMQAWQGNTVIQRITP 62 Query: 60 AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 L +DGL LF ++ ++G + IY+ Y+ + G +Y + Sbjct: 63 WMPELGISLAFRLDGLSLLFSLMILLVGLIVVIYARYYLSPRDSMG--------RFYSYL 114 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFG 179 LF+ +ML VV S N+I + E T+LSS L+ + QR + + T G Sbjct: 115 LLFMGSMLGVVLSENIIQLLMFWELTSLSSFLLISYWQQREEASRGARMALTITGGGGLA 174 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 + G L+ N A +++ + + L++L G TK+ FP H Sbjct: 175 MLGGFLLLGNMAGSYDLSDILLAGDAIRSHEHYPLMLLLILL------GVFTKSAQFPFH 228 Query: 240 AWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 WLP+A + AP+PVSA L SA ++ + +L R + + G+ ++ G+ + Sbjct: 229 FWLPNAMA-APTPVSAYLHSATMVKAGIFLLARLFPAL---SGTPEWTWIVSGVGIATFV 284 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 ++ L + D+K LLAYS++ ++GL+ GIG PL + A + HI+NH+ K LF + Sbjct: 285 TGSYIALFKHDMKALLAYSTISHLGLIVALFGIGTPLAVVAGIFHIINHATFKASLFMLA 344 Query: 359 GNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN- 417 G V + GTRD+ + G+ + MP++AVL A A+AG+P N F+S+ M + +A Sbjct: 345 GIVDHETGTRDIRHLGGLRRYMPYSAVLMVIAAAAMAGIPGLNGFISKEMFLDQIVAHGN 404 Query: 418 ----HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR--GDLGWLTTSPMVILLVM 471 L+ ++ A +R+A V P + + D P+ IL+ Sbjct: 405 TFPHQWLLPAIVTAGAVFSAAYSIRIAHSVFFGSEPDDLPKAPHDPSSGMQIPVAILVAA 464 Query: 472 MLAMGT--HIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPS 514 +A+G I +P++ ++ ++ T + WH P+ Sbjct: 465 CVAVGVLPAIAEPLVTLVTASTL----QTAPPAFHLAIWHGLTPA 505 >UniRef50_C7R7H2 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Gammaproteobacteria RepID=C7R7H2_KANKD Length = 672 Score = 340 bits (874), Expect = 5e-92, Method: Composition-based stats. Identities = 126/544 (23%), Positives = 233/544 (42%), Gaps = 59/544 (10%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 MS L++L PL+ ++L KR + + I+ +L L ++ DA Sbjct: 1 MSMQTQLLLIVLAPLIGAMLAGLLGKRLGRRLTHRLTIIGVVISFILSLRIFWGFLYGDA 60 Query: 61 GEI------------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 + + ID L L + ++ + + IYSIGYM + + Sbjct: 61 TPVDMTVYHWASFSDLTIQIGFMIDSLSALMMVVVTFVSLMVHIYSIGYMHDDDGYQ--- 117 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWK 167 ++ + LF F+ML++V +NN + ++ EA L S L+G + Q+ ++ A K Sbjct: 118 -----RFFSYLSLFTFSMLMLVMANNFLQLFFGWEAVGLVSYLLIGFWYQKESAIFANMK 172 Query: 168 YIIICTVGVAFGLFGTVLVYANAASV--------MPQAEMAIFWSEVLKQSSL------- 212 ++ VG + G ++ + M QAE + SE +++L Sbjct: 173 AFLVNRVGDFGFILGIGAIFLLFGTFDYAPIFKSMGQAEEIMQISERSAENALGLMSLDG 232 Query: 213 -------LDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNC 264 ++ + L IG K+ P+H WLPD+ E P+P+SAL+ A ++ Sbjct: 233 SFVAWGDTSWPIITFICICLFIGAMGKSAQVPLHVWLPDSM-EGPTPISALIHAATMVTA 291 Query: 265 ALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGL 324 + ++ R + S+ ++ I G ++ +VQ DIKR++AYS++ +G Sbjct: 292 GVFMVARMSPLFE---FSETALTMVTIIGAITALFMGLVAIVQNDIKRIIAYSTLSQLGY 348 Query: 325 VAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFT 383 + V LG+ AA+ H+ H+ K LLF G+G+V++ + +++ + G+ K +P T Sbjct: 349 MVVALGVS---AYSAAIFHLFTHAFFKALLFLGAGSVIVALHHEQNIRKMGGLYKRLPLT 405 Query: 384 AVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL---LIIVLLLLLLTLVLAGLVRMA 440 G LAL G P F F S+ I A ++ + + +RM Sbjct: 406 YWTTLVGTLALIGTPFFAGFYSKDAIIMAASEAQGPAASFAYFAVMAGVVVTALYSMRML 465 Query: 441 ARVLMAKPPQAVNR----GDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLS 496 V K + + T P++ L V L +G + +P++ A ++++ Sbjct: 466 LVVFHGKSSLDEQHLNQLTESPRVITWPLIALAVPSLIIGWFMTKPMLDGDYFAESLMVL 525 Query: 497 GTHD 500 +HD Sbjct: 526 TSHD 529 >UniRef50_B8FRJ9 Proton-translocating NADH-quinone oxidoreductase, chain L n=11 Tax=Firmicutes RepID=B8FRJ9_DESHD Length = 651 Score = 340 bits (874), Expect = 5e-92, Method: Composition-based stats. Identities = 129/490 (26%), Positives = 225/490 (45%), Gaps = 35/490 (7%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLH---SLGITLLLILALWVVQTAADAGEIF 64 L+ P L LL KR + T+++L S G+++ + L + + + Sbjct: 13 WLIPFLPFLSFLLIALVTKRSKRLSSTISILAILTSFGLSIAIGLGVIQSGSQIVENPVL 72 Query: 65 AAGLWLHI-----------DGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 WL I D + + L ++ ++ + IYSIGYM + Sbjct: 73 TTVNWLSIGGLHIDFGTLIDPMSAMMLFVVTLVASMVQIYSIGYMHGDPG--------FS 124 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIIC 172 YY F LF +ML +V + NL+ ++ E L S L+G + + S+ EAA K I Sbjct: 125 RYYAFQSLFAASMLGMVLATNLLQLFIFWELVGLCSYLLIGFWFFKVSAREAAKKAFITT 184 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAI---FWSEVLKQSSLLDPTLMLLAFVFLLIGF 229 VG L G + +Y ++ ++ + + + + + + + + IG Sbjct: 185 RVGDFGLLLGILFLYNTFGTLDFYGPGSLSVQMATSFHDFALIGGVSYLTIMAILVFIGP 244 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRL 288 K+G FP+H WLPDA E P+PVSAL+ A ++ + ++ R + + A S F +L Sbjct: 245 VGKSGQFPLHVWLPDAM-EGPTPVSALIHAATMVVAGVYLVARMFFLFDNA--SPFALQL 301 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 + G + AA + Q DIKR+LAYS++ +G + LG+G + A++ H++ H+ Sbjct: 302 VAGMGAFTAIFAATIAIAQDDIKRILAYSTLSQLGYMMFALGVGS---LTASMFHLMTHA 358 Query: 349 LAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 K L+F G+G+V+ + +++ + G+ K MP T F G LA+AG+PPF F S+ Sbjct: 359 FFKALMFLGAGSVIHALHHKQNIWDMGGLWKKMPITGTTFFIGVLAIAGIPPFAGFFSKD 418 Query: 408 MTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVI 467 + A H +I + L L + R+ M + + + W+ T P++I Sbjct: 419 EILLAAYH-GHPIIFAVGLFTAFLTAFYMSRLFFVAFMGEEKPENHPHESPWVMTLPLII 477 Query: 468 LLVMMLAMGT 477 L + G Sbjct: 478 LAFFSVVGGW 487 >UniRef50_C0YTV8 NADH dehydrogenase I chain L n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YTV8_9FLAO Length = 637 Score = 340 bits (874), Expect = 6e-92, Method: Composition-based stats. Identities = 121/489 (24%), Positives = 222/489 (45%), Gaps = 40/489 (8%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 + ++L PLL L+ K + + + ++L++ + I Sbjct: 4 LVYAIVLLPLLGFLINGLFGKNLPKILVGSLATAVVFGSFCIAVSLFMNFNSESQPVIVK 63 Query: 66 AGLWLH-----------IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 A W ID L + + I+ IG L +YSIGYM H+ Sbjct: 64 AFEWFRVNGVQINFGFQIDQLSLMMVMIITGIGSLIHLYSIGYMSHDKG--------FYK 115 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICT 173 ++ + +LF+F+MLL+V +N ++++ E L S L+G + +AA K I+ Sbjct: 116 FFTYLNLFIFSMLLLVMGSNYLILFIGWEGVGLCSYLLIGFWYTNEEYGKAARKAFIMNR 175 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 +G L G ++ + +V + LD T+++ L IG K+ Sbjct: 176 IGDLALLIGIFMIASQTNAVDYLSVAEN------ASKFELDGTVIIFITASLFIGATGKS 229 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 P++ WLPDA + P+PVSAL+ A ++ + +++R + A ++L Sbjct: 230 AQVPLYTWLPDAMA-GPTPVSALIHAATMVTAGIYLVVRSNFLFTLA---PTVQGVILFI 285 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G L+ A+A F+ L Q DIK++LAYS+V +G + + LG+G A+ H++ H+ K Sbjct: 286 GFLTAALAGFYALRQNDIKKVLAYSTVSQLGFMFIALGLG---AYTTAMFHVMTHAFFKA 342 Query: 353 LLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 LLF G+G+V+ +D+ + G+ K +P T F G LA++G P + +S+ + Sbjct: 343 LLFLGAGSVIHAMSNEQDMRFMGGLKKYIPLTHATFLIGTLAISGFPLLSGMISKDEILV 402 Query: 412 AGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK----PPQAVNRGDLGWLTTSPMVI 467 A A+N + ++L +L + + R+ + Q + + T P+++ Sbjct: 403 AAFAKNPVYWVILFVLA-AITATYMFRLYYLTFHGEFRGTEEQKHHLHESPSNMTLPLIV 461 Query: 468 LLVMMLAMG 476 L V+ + G Sbjct: 462 LAVLSVIGG 470 >UniRef50_C8W239 Hydrogenase 4, membrane subunit n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W239_DESAS Length = 489 Score = 340 bits (874), Expect = 6e-92, Method: Composition-based stats. Identities = 193/492 (39%), Positives = 308/492 (62%), Gaps = 5/492 (1%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 M LLL P++ ++LCF R SA + + +L L A++ + A +G Sbjct: 1 MLYLLLAVPVITAVLCFL--PMRASAVEKINIWGAL---LTGCTAIYCIFQALVSGSAAV 55 Query: 66 AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFT 125 +L +D L +F+ I+GV+G + +Y++ Y+R + GEL ++G HLFL + Sbjct: 56 KSSFLVLDALSSVFVFIIGVVGTICCLYAVSYLRRDQERGELEQRRTGIFFGLLHLFLAS 115 Query: 126 MLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVL 185 M L V ++NL VMW AIEATT+ SA LVG YG + SLEAAWKYIIICTVG+AF + G + Sbjct: 116 MYLAVLADNLGVMWVAIEATTIVSALLVGFYGHKESLEAAWKYIIICTVGIAFAMLGIIF 175 Query: 186 VYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDA 245 Y + E+++ W + + +DP+LM LAF+F+L+G+GTK GLFP+H WLPDA Sbjct: 176 TYYAVRGISGGEEISLSWRLLFSMAGQIDPSLMKLAFIFVLVGYGTKAGLFPLHTWLPDA 235 Query: 246 HSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFIL 305 HS+APSPVSALLS VLLNCA+ +IR++++ +++G +F +LL+IFG+LS+ + FIL Sbjct: 236 HSQAPSPVSALLSGVLLNCAVYAIIRFHLLTVKSVGGNFSAKLLIIFGLLSMVGSLPFIL 295 Query: 306 VQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY 365 VQ+DIKRLLAYSSVE++G++ + +GIGG LG ALLH++NH+L K++LF +G + KY Sbjct: 296 VQKDIKRLLAYSSVEHIGIIVLGVGIGGVLGYTGALLHLINHALGKSVLFLSAGTLTQKY 355 Query: 366 GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLL 425 ++ + + G+ +++P T+ +F LA+ G PPF +F+SE + G A + + Sbjct: 356 NSKLIPKMKGIGQLLPITSTVFMASLLAIGGAPPFGLFISELNVASGGFAYVGKSVGFIF 415 Query: 426 LLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIR 485 L+++ +V AGL+ A ++ + P+ +G+ +++ L +++ G ++P Sbjct: 416 LMVIAIVFAGLIYFAGKMYFSNLPKRFIQGERFSFNHVLILLPLCLLIMQGIYMPDAFQS 475 Query: 486 ILAGASTIVLSG 497 ++ ++ G Sbjct: 476 LIGKVVNYLIVG 487 >UniRef50_Q04YB3 NADH dehydrogenase (Ubiquinone), L chain n=7 Tax=Bacteria RepID=Q04YB3_LEPBL Length = 648 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 131/495 (26%), Positives = 217/495 (43%), Gaps = 41/495 (8%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVT---VLHSLGITLLLILALWVVQ-- 55 M + + L+ PL+ L+ K T + V S G+ L+ + ++ Sbjct: 1 MEIANLIPALVALPLIGFLISGLFGKWLKGFTGIFSTGVVFLSFGLALVSFVLFHPMERT 60 Query: 56 ---TAADAGEIFAAGL----WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 A I G+ +D L I+ IG L +YSIGYM+ + Sbjct: 61 IPEIVAVLPWIETGGIQVSLAYQVDQLSLYMTLIITGIGSLIHLYSIGYMKDDPG----- 115 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWK 167 Y+ + +LF+F ML +V + NLI+++ E L S L+G Y + S+ A K Sbjct: 116 ---FARYFAYLNLFIFAMLNLVLAENLILLFLGWEGVGLCSYLLIGFDYHKESAANAGMK 172 Query: 168 YIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLI 227 I+ +G L G LV+ SV + ++ + V I Sbjct: 173 AFIVNRIGDLGMLLGIALVFWYTGSVSFTTIEGAILEIPSFR------YILPVTAVCFFI 226 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPN 286 G K+ P+H WLPDA + P+PVSAL+ A ++ + ++ R I A Sbjct: 227 GAIGKSAQLPLHVWLPDAMA-GPTPVSALIHAATMVTAGVFLIARLNPIFLSAPQ---VG 282 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 +++ G ++ AA L Q DIK++LAYS+V +G + V +G G A L H++ Sbjct: 283 HWIVVIGSMTAFFAATIGLFQNDIKKVLAYSTVSQLGYMFVAMGAG---AYVAGLFHLMT 339 Query: 347 HSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 H+ K LLF GSG+V+ + +DL + G+ K M T + F G+LA++G+PPF+ F S Sbjct: 340 HAFFKALLFLGSGSVIYALHHEQDLRNMGGLKKRMKITWITFLVGSLAISGIPPFSGFFS 399 Query: 406 EFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLGWLT 461 + + + L L ++ L + RM + +A++ + + Sbjct: 400 KDLILEKSYTYG-ALFYGLGIITALLTAFYMFRMTYLAFYGESRVSSDKALHLHESPLVM 458 Query: 462 TSPMVILLVMMLAMG 476 T P+VIL + G Sbjct: 459 TIPLVILSIGATVTG 473 >UniRef50_B5YKJ0 NADH-quinone oxidoreductase chain l n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKJ0_THEYD Length = 630 Score = 339 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 126/494 (25%), Positives = 222/494 (44%), Gaps = 41/494 (8%) Query: 9 LLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI----- 63 L+LL PL L R + + V+ L I L++AL+ + I Sbjct: 7 LILLFPLAGFLFNILIG--RFISPKVVSWAGVLSILGSLVVALFAIAQVFSGKTIEYNIY 64 Query: 64 -------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 ID L + L ++ +G+L IYS+GYM + + Y+ Sbjct: 65 TWILSDDLKVSFGYLIDQLTAVMLFVVCFVGWLIHIYSVGYMHGDPGY--------PRYF 116 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYIIICTVG 175 + +LF+F+ML++V NNL++++ EA L S FL+G + ++++ +A K I+ +G Sbjct: 117 AYLNLFVFSMLMLVMGNNLVMLYFGWEAVGLCSYFLIGFWYHKKTASDAGKKAFIVNRIG 176 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPT--LMLLAFVFLLIGFGTKT 233 G L++ N ++ ++ L+ L + L G K+ Sbjct: 177 DFGFALGIFLLFINVYALNYTDIFPKIPGLQGHTLNIFGWNIDLITLIALLLFCGAVGKS 236 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 P+H WLPDA E P+PVSAL+ A ++ + ++ R I S+ ++ I Sbjct: 237 AQIPLHVWLPDAM-EGPTPVSALIHAATMVTAGVFMVARLNPIYGM---SEIALAVVAIT 292 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G ++ AA LVQRD+KR++AYS++ +G + + G+ A + H+ H+ K Sbjct: 293 GAVTSFFAATIALVQRDMKRIIAYSTISQIGYMFIGCGMA---AYGAGIFHLYTHAFFKA 349 Query: 353 LLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 LLF G+G+V+ G D+ + G+ K MP T + F +L +AG+P F+ F S+ + Sbjct: 350 LLFMGAGSVMHAMAGELDIYKMGGLRKKMPITYITFLIASLTIAGIPGFSGFFSKDEILW 409 Query: 412 AGLARNHL---LIIVLLLLLLTLVLAGLVRMAARVLMAK----PPQAVNRGDLGWLTTSP 464 A A I +L + L R+ K P + + + + T P Sbjct: 410 AAFASAKPYGKFIWLLGTITAALTAFYTFRILFVAFHGKFRGTPEEFKHVHESPPIMTVP 469 Query: 465 MVILLVMMLAMGTH 478 +++L + + +G Sbjct: 470 LIVLAIGSVIVGYF 483 >UniRef50_Q55429 NAD(P)H-quinone oxidoreductase chain 5 n=19 Tax=cellular organisms RepID=NU5C_SYNY3 Length = 681 Score = 339 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 121/468 (25%), Positives = 197/468 (42%), Gaps = 45/468 (9%) Query: 6 MFALLLLTPLLFS------LLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAAD 59 + L+ + PL + L+ F +L V ++ LG L++ AL Q Sbjct: 7 LAWLIPVLPLFGATVVGIGLISFNQATNKLRQINAVFIISCLGAALVMSGALLWDQIQGH 66 Query: 60 AGEI----------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSP 109 A F + ID L L L I+ + L IY+ GYM H+ + Sbjct: 67 ASYAQMIEWASAGSFHLEMGYVIDHLSALMLVIVTSVALLVMIYTDGYMAHDPGY----- 121 Query: 110 VTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKY 168 +Y + LF +ML +V S NL+ ++ E + S L+G + R ++ +A K Sbjct: 122 ---VRFYAYLSLFASSMLGLVISPNLVQVYIFWELVGMCSYLLIGFWYDRKAAADACQKA 178 Query: 169 IIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIG 228 + VG L G + +Y S E L S +L + + + + +G Sbjct: 179 FVTNRVGDFGLLLGILGLYWATGSFDFGTIGERL--EGLVSSGVLSGAIAAILAILVFLG 236 Query: 229 FGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNR 287 K+ FP+H WLPDA E P+P+SAL+ A ++ + ++ R Y + Sbjct: 237 PVAKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARMYPVFEPI---PVVMN 292 Query: 288 LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNH 347 + G + + A L Q DIK+ LAYS++ +G + + +GIG A L H++ H Sbjct: 293 TIAFTGCFTAFLGATIALTQNDIKKGLAYSTISQLGYMVMAMGIG---AYSAGLFHLMTH 349 Query: 348 SLAKTLLFCGSGNVLLKYG---------TRDLNVVCGMLKIMPFTAVLFGGGALALAGMP 398 + K +LF SG+V+ +D+ ++ G+ K MP TA F G LA+ G+P Sbjct: 350 AYFKAMLFLCSGSVIHGMEGVVGHDPILAQDMRIMGGLRKYMPITATCFLIGTLAICGIP 409 Query: 399 PFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA 446 PF F S+ + N LL V + + RM Sbjct: 410 PFAGFWSKDEILGLAFQANPLLWFV-GWATAGMTAFYMFRMYFMTFEG 456 >UniRef50_A6TVL5 NADH dehydrogenase (Quinone) n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVL5_ALKMQ Length = 498 Score = 338 bits (868), Expect = 3e-91, Method: Composition-based stats. Identities = 124/445 (27%), Positives = 218/445 (48%), Gaps = 16/445 (3%) Query: 56 TAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 T G+ +D L ++ + L IYS+ + HE + Y Sbjct: 61 TYTFGQWNPTIGIEFVVDEFSALMTLVVLSVATLIIIYSLKDIEHE-----ILKEQFFSY 115 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVG 175 Y L LF+M+ ++ +N+L ++ +E +L+S ++ I ++ +L A++KY+++ +G Sbjct: 116 YTLIFLLLFSMIGMIFTNDLFNLYVFMEILSLTSCGIISIKRKKENLMASFKYLMLGAIG 175 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGL 235 L G L+Y + A EV+ Q P +L+A F+L GFG K + Sbjct: 176 SVSILMGIALLYMVTGHLNMTAAY-----EVITQVWQSYPRNILIALGFILTGFGIKAAI 230 Query: 236 FPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIR--YYIIICQAIGSDFPNRLLLIFG 293 FP+H WLPDAHS AP+P SALLS +++ + + + + ++ + S + F Sbjct: 231 FPLHIWLPDAHSNAPTPSSALLSGLVVKVYVFAIAKILFRVLGQDIVQSIGVTEFITYFA 290 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 +LS+ + + F + Q DIKRLLAYSSV +G + + LG+ LG A L H++ H+L K+ Sbjct: 291 VLSMIMGSVFAIGQTDIKRLLAYSSVAQIGYIFLGLGLATELGFSAGLFHVITHALMKSA 350 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 LF +G ++ + G RD+ + G+ MP T +F AL + G+P N F+S++ A Sbjct: 351 LFLSAGAIIYQTGKRDIRDLDGIGYQMPITMGVFSVAALGMIGIPGLNGFMSKWYLSLAV 410 Query: 414 LARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR---GDLGWLTTSPMVILLV 470 L + + ++++L+ L + + + + + N L PMVI+ + Sbjct: 411 LEADKPVFLIMILISSFLNAIYYLPIIIAAFLKESNERDNVMVLDRLPKTMMYPMVIIAI 470 Query: 471 MMLAMGTHIPQPVIRILAGASTIVL 495 + MG P V+ ++ A L Sbjct: 471 GCVVMG-FFPHIVMDVVERAVPTFL 494 >UniRef50_B2A3T0 NADH dehydrogenase (Quinone) n=2 Tax=Clostridia RepID=B2A3T0_NATTJ Length = 500 Score = 338 bits (868), Expect = 3e-91, Method: Composition-based stats. Identities = 124/508 (24%), Positives = 227/508 (44%), Gaps = 34/508 (6%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAAD------ 59 + L++L PL+ + + F ++ + ++V+ S IT L++ A++ V + Sbjct: 10 LPMLIVLFPLIMTGVIFLVEQKSIFGRNLLSVVTS-AITFLMVAAMYPVVIKGEVIYYQL 68 Query: 60 AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 A I G+ +D LG + I L IYS+ YM+ E G YY Sbjct: 69 ANLIPPFGISFMVDTLGFGLSLLASFIWMLVTIYSLEYMKKENYTG--------RYYPAL 120 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFG 179 L L + + + +L M+ E +L S L+ + +L A +KY+I+ +G F Sbjct: 121 SLTLSGSMGLFLAGDLFTMFIFFEIMSLVSYLLIIHNETKEALRAGYKYLIVTIIGGLFL 180 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 FG ++ + + ++ I +L F+ +IGFG K G+ P+H Sbjct: 181 FFGIIITFELSQTITLSEMGIIS----------TPTSLAFAGFLSFVIGFGMKAGMVPLH 230 Query: 240 AWLPDAHSEAPSPVSALLSAVLLNCALLVLIR--YYIIICQAIGSDFPNRLLLIFGMLSV 297 WLP+AH APSP SALLS +++ LIR +++ Q I + +L + ++++ Sbjct: 231 IWLPEAHPVAPSPASALLSGIMIKTGAYGLIRIMFHVFDYQMILEANWHLILAVVAVITI 290 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 + + + Q D+KR LAYSS+ MG + + L I + + HI +H+ K+ LF Sbjct: 291 FLGSAVAITQEDLKRRLAYSSIGQMGYILLGLAILTETAMTGDIFHIFSHAFMKSTLFLA 350 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 +G +++K G + + + G+ + MP T + F ALA+ G+PP N F+S++ L Sbjct: 351 AGAMIMKTGKKKIADLKGVGRAMPLTMLSFTIAALAMIGIPPLNGFISKWSLSLGALEAG 410 Query: 418 HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR-------GDLGWLTTSPMVILLV 470 +V+LL+ + + + K + + + P+ IL Sbjct: 411 QPYYVVILLISSLMNSVYYLPIINTAYFGKSEETDDDVESKGVISEAPMKMVMPVAILGF 470 Query: 471 MMLAMGTHIPQPVIRILAGASTIVLSGT 498 L + + A+ +++G Sbjct: 471 SCLILSLFPTNIPYELAQLAAKALINGN 498 >UniRef50_C0Z765 NADH-quinone oxidoreductase chain L n=2 Tax=Bacillales RepID=C0Z765_BREBN Length = 637 Score = 338 bits (867), Expect = 3e-91, Method: Composition-based stats. Identities = 127/481 (26%), Positives = 214/481 (44%), Gaps = 30/481 (6%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAA- 66 L+ L PLL ++ + ++ V + + + +L W + Sbjct: 9 WLIPLFPLLAFIVIVSFGRQLKEGAAIVGITLTAVSFGIAVLIFWERFQGGGTDYNYVID 68 Query: 67 ---------GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 + ++ L + L I+ ++ L IYS GYM + +Y Sbjct: 69 WLHIGDIVINMGFEVNPLNAMMLVIVTLVSLLVQIYSKGYMHGDE--------RFPVFYQ 120 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYIIICTVGV 176 + LF F+ML +V S NL+ ++ E + S LVG Y + + AA K I+ +G Sbjct: 121 YLALFTFSMLGLVISPNLLQVYIFWELVGVCSFLLVGYYYFKNEAKAAAKKAFIVTRIGD 180 Query: 177 AFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLF 236 G L++ S A L+P ++ LA + + IG K+G F Sbjct: 181 LGLFIGICLLFWWTGSFEYGAIFESIAL------GRLEPWMITLAAILIFIGAMGKSGQF 234 Query: 237 PMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGML 295 P+H WLPDA E P+PVSAL+ A ++ + ++ Y + I SD ++ G Sbjct: 235 PLHTWLPDAM-EGPTPVSALIHAATMVAAGVYLVAATYPLF---IASDTALTVVAYVGGF 290 Query: 296 SVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLF 355 + AA L QRDIKR+LAYS+V +G + + LG+ G G A H++ H+ K LLF Sbjct: 291 TAIFAASIGLTQRDIKRVLAYSTVSQLGYMMMALGVAGAAGYVAGSFHLMTHAFFKALLF 350 Query: 356 CGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLA 415 G+G+V+ T+++ + G+ K MP TA+ F G LA+AG+ PF F S+ + A Sbjct: 351 LGAGSVIHAVHTQNVFEMGGLWKKMPITALTFLIGCLAIAGIFPFAGFWSKEAILGAVYG 410 Query: 416 RNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAM 475 + ++ + LL + R+ K + + T P+++L ++ + Sbjct: 411 AHRYDLLFIALLAAFFTAFYMFRLFFLTFAGKARGKHEAHESPGVMTGPLLVLALLAVVA 470 Query: 476 G 476 G Sbjct: 471 G 471 >UniRef50_A9F578 NADH dehydrogenase I chain M n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F578_SORC5 Length = 754 Score = 338 bits (867), Expect = 4e-91, Method: Composition-based stats. Identities = 121/529 (22%), Positives = 219/529 (41%), Gaps = 53/529 (10%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQT-------- 56 + ++L PLL + F R R + ++ + + + L+LA W+ Sbjct: 193 HILSILTFLPLLGVVAVFLAHLLRYRDDRKLRLMTVVLMGVNLVLAAWLYAQFDRGFTRA 252 Query: 57 -AADAGEIFAAGLWLH---------IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGE 106 D + G+W+ +DG+ + + +I F+ + S Sbjct: 253 DGNDGYQFIEHGVWIRSLNVEYFVGVDGVSISMVLLTALISFVGALASYS---------- 302 Query: 107 LSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAW 166 L Y+ ++L + M V + +L + + E L FL+GI+G AA Sbjct: 303 -VHDQLKGYFAMYNLLVTGMFGVFIALDLFLFFVFWEVMLLPMYFLIGIWGGPRREYAAI 361 Query: 167 KYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAI----------FWSEVLKQSSLLDPT 216 K+ + G F L + Y NA A + + ++L Sbjct: 362 KFFLYTLAGSVFMLLAFIWFYLNAGHTYLVDGQATERIFSIPELSRVAWAAQGLTILGVA 421 Query: 217 LMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIII 276 + + +++L +GF K +FP H WLPDAH EAP+ +S +L+ VLL ++R + Sbjct: 422 AVKVVWIWLFVGFAIKIPMFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGILRINFTL 481 Query: 277 CQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLG 336 + + + +FG++++ AF + Q D+K+L+AYSSV +MG + LG P G Sbjct: 482 LPE-ATQWAAPAMAVFGVVNILYGAFCAMAQSDLKKLVAYSSVSHMGFTLLALGAMTPQG 540 Query: 337 IFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAG 396 I A L+ + NH L +LF G V + TRD++ G+ MP L G +A G Sbjct: 541 IQACLVQMFNHGLITGMLFTLVGVVYDRVHTRDIDRFGGLASEMPLYTALVGFAFMASLG 600 Query: 397 MPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK--------- 447 +P + F E MT R + + +L + + L A + R+ + Sbjct: 601 LPGLSGFWGEAMTFIGAFPR-YRALTILAAVGVILTAAYHLWALQRMFLGTFRASWRQSK 659 Query: 448 --PPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIV 494 P ++ + + L ++L +G P+P++ ++ + V Sbjct: 660 YLEPFGGKFPEISGRELASIAPLAALVLVLG-FWPRPLLSLIDRGALDV 707 >UniRef50_B3QXL9 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXL9_CHLT3 Length = 643 Score = 335 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 108/430 (25%), Positives = 194/430 (45%), Gaps = 35/430 (8%) Query: 68 LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 + ID L L ++ +G L IYSIGYM + ++ + +LF+F M+ Sbjct: 87 ITYRIDSLSLLMGLVVTGVGSLIHIYSIGYMHGDK--------DFARFFSYLNLFIFAMM 138 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS--------SLEAAWKYIIICTVGVAFG 179 ++ + ++ +M+ E L S L+G + + + AA K I+ +G Sbjct: 139 NLILAESMPLMFLGWEGVGLCSYLLIGFWYDKKFDGVGITWTGNAANKAFIVNRIGDFAM 198 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L L++ N + +L ++ LD L + + IG K+ P+ Sbjct: 199 LIAMFLIFQNIGRLDFTG--------ILSGAASLDAGLAFWITLLIFIGSTGKSAQIPLF 250 Query: 240 AWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 WLPDA + P+PVSAL+ A ++ + ++ R + A + ++ + G L+ Sbjct: 251 VWLPDAMA-GPTPVSALIHAATMVTSGIYLIARLSPLFLLAPET---MHIIAVVGTLTAI 306 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 +A +VQ DIK++LAYS+V +G + + LGIG A+ H+ H+ K LF GS Sbjct: 307 MAGTIGIVQNDIKKVLAYSTVSQLGYMFLALGIG---AFSTAIFHVATHAFFKACLFLGS 363 Query: 359 GNVLLKYGT-RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 G+V+ +D+ + G+ K MP TA+ F ALAG P F S+ + A + Sbjct: 364 GSVIHGMHEEQDIRKMGGLFKKMPSTAITFLIATFALAGFPLTAGFFSKDAILAAAFGSH 423 Query: 418 HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP--QAVNRGDLGWLTTSPMVILLVMMLAM 475 + L+ + +L + +R+ + P + + + + T P+ +L + L Sbjct: 424 NTLLYGVGVLTAVITAFYSMRLYTLTFLGNPRWSEHAHPHESPAVMTLPLWVLAALSLVG 483 Query: 476 GTHIPQPVIR 485 G PV++ Sbjct: 484 GFIGLPPVVQ 493 >UniRef50_Q11VC3 NADH dehydrogenase I chain L n=5 Tax=Bacteroidetes RepID=Q11VC3_CYTH3 Length = 636 Score = 335 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 128/487 (26%), Positives = 222/487 (45%), Gaps = 34/487 (6%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF 64 ++ AL LL L+ SL K + +L S I L L+ A +F Sbjct: 7 LIPALPLLGFLILSLFNKHIPKSASGYIASAMMLGSFAIVLTLLCKAAGGDLTATTVTVF 66 Query: 65 AA--------GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 L ID L F++I+ +GFL +YSI YM + + Y+ Sbjct: 67 DWIHVGDLKLALSFQIDNLSVWFMSIITGVGFLIHVYSISYMHDDEG--------VTRYF 118 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVG 175 + +LF+F+MLL+V +N +VM+ E L S L+G + + + AA K I+ +G Sbjct: 119 SYLNLFVFSMLLLVMGSNYVVMFTGWEGVGLCSYLLIGFWFKNQAYNDAAKKAFIMNRIG 178 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGL 235 L G +L+Y S+ +F + + ++ + L +G K+ Sbjct: 179 DLGFLLGMLLIYNQFKSLEYSV---VFDQALKIINPNEPSGIIFAITMLLFVGAMGKSAQ 235 Query: 236 FPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 P++ WLPDA + P+PVSAL+ A ++ + ++ R I+ A + ++ + G Sbjct: 236 IPLYTWLPDAMA-GPTPVSALIHAATMVTAGIYMIARSNILYSMAPCT---LDIIYVVGT 291 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLL 354 + +AA L Q DIK++LAYS+V +G + + +G+G G A + H+ H+ K LL Sbjct: 292 GTAILAALIGLTQTDIKKVLAYSTVSQLGFMFMAIGLG---GYSAGVFHVTTHAFFKALL 348 Query: 355 FCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 F G+G+V+ G +D+ + G++K +P T + F LA+AG+PP F S+ + Sbjct: 349 FLGAGSVIHAMGGEQDIRKMGGLMKKLPITFITFIIATLAIAGIPPLAGFFSKDAILALA 408 Query: 414 LARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK----PPQAVNRGDLGWLTTSPMVILL 469 + L L + L + RM + Q + + L T P+++L Sbjct: 409 FESSPLKW-GLGVFAALLTTFYMFRMLFLTFFGEFRGTTHQKEHLHESPLLMTIPLMVLA 467 Query: 470 VMMLAMG 476 ++ + G Sbjct: 468 LLTVVSG 474 >UniRef50_B1KJV8 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Shewanella RepID=B1KJV8_SHEWM Length = 622 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 108/482 (22%), Positives = 213/482 (44%), Gaps = 29/482 (6%) Query: 36 TVLHSLGITLLLILALW---VVQTAADAGEIF-----AAGLWLHIDGLGGLFLAILGVIG 87 +V + + + L +ALW G+ + L++D L + + I+ IG Sbjct: 36 SVSLAALLAVSLNIALWDQTQFVLQTSLGQWLTIDKLSLSFTLYLDPLSLVMITIITCIG 95 Query: 88 FLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTL 147 L +YS YM+ + +C ++ + +LF+ ML +V ++NLI+++ E L Sbjct: 96 ALIHLYSASYMKED--------ADICRFFVYLNLFVSAMLFLVLADNLILLYLGWEGVGL 147 Query: 148 SSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEV 206 S L+G + + + +AA K II +G L G +L++ ++ Q A + Sbjct: 148 CSYLLIGFWYREVKNSQAANKAFIITRIGDTAMLIGIILIFYQFDTLNIQQIQAHSQQLL 207 Query: 207 LKQSSLLDP--TLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLN 263 L L L + L G K+ P+H+WLPDA + P+PVSAL+ A ++ Sbjct: 208 QNSELLTKGAVGLTSLCCLLLFAGAAGKSAQVPLHSWLPDAMA-GPTPVSALIHAATMVT 266 Query: 264 CALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMG 323 + ++ R + A + I G++++ + A L Q D+KR+LAYS++ +G Sbjct: 267 AGIYLVARNIELFSLAPD---VLHFIAIVGVITLILGATSALAQTDLKRILAYSTISQLG 323 Query: 324 LVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLL-KYGTRDLNVVCGMLKIMPF 382 + + LG+G AA+ H++ H+ K LLF +G ++ + +++ + G+ K P Sbjct: 324 YMFLALGVGSA---SAAVFHLMTHAFFKALLFLSAGALIYCMHHEKNIFKMGGLRKSQPL 380 Query: 383 TAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAAR 442 A+ FG G ALA +P + F S+ + + L ++ ++ ++ Sbjct: 381 LALSFGIGCAALASLPMTSGFFSKELILERTLFAQQPILWWGGVVGAFFTALYSAKLFFV 440 Query: 443 VLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLP 502 + K + + + + ++ L+++ L G A +++ + Sbjct: 441 IFFGKLSR-PSTHNTPRAMAAVLIALMLLSLIGGIQPQGVFAHFAALEQSLITAPPLSAL 499 Query: 503 AQ 504 Sbjct: 500 EH 501 >UniRef50_C5A2R1 Formate hydrogenlyase II subunit D (Mhy2D) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A2R1_THEGJ Length = 694 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 149/533 (27%), Positives = 229/533 (42%), Gaps = 44/533 (8%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M +F L ++ L+ L RK ++ V L LL + V+ A Sbjct: 1 MKMKELFTLTVILYLISILAVLPLRKNYRASITVGHVFTGLASLSLLAFTVSVLPEALKG 60 Query: 61 GEIFAAG------LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 I + H+DGL + +LG +G T IYS YM G Sbjct: 61 KAIEFTYDLGVAKIPFHVDGLSLILCLVLGSLGLATSIYSPKYMEFYERFGRG-----WL 115 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICT 173 Y + F+ +M+L+VT++N + E T +S L+ + A WKY + Sbjct: 116 YVVLYSTFVLSMVLIVTTSNFLWFVFFWEVMTFTSYLLMVWENDEEYVRKAGWKYFVTMH 175 Query: 174 VGVAFGLF-GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTK 232 V L L+YA A S+ E L +L L + ++ L+GFG+K Sbjct: 176 VASTLPLIVALALLYAKAGSI-----------EGLNFDNLSKLHLGPIYYLLFLVGFGSK 224 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 G+ P+H WLPDAH APS VSALLS ++ A+ LIR I ++ ++ I Sbjct: 225 AGVVPLHFWLPDAHPAAPSNVSALLSGAMIKVAVYGLIRTTCFILGL--NETFGYIVAIL 282 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAA------------ 340 G +++ V + L Q D KRLLAY SV MG + + +G G L Sbjct: 283 GTVTLTVGTLYALKQTDAKRLLAYHSVGQMGYIWLGVGAGIALMAKGGSYAAFGAIAMAA 342 Query: 341 -LLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPP 399 L H++NH++ K LLF +G+VL + TR+LNV+ G+ K+MP TA+ A+++AG PP Sbjct: 343 GLYHLVNHAIFKGLLFLSAGSVLYRTHTRELNVLGGLAKLMPLTALFTFIAAMSIAGEPP 402 Query: 400 FNIFLSEFMTITAGLARNHLLII---VLLLLLLTLVLAGLVRMAARVLMAKPPQA-VNRG 455 FN F+S++M L++ V+ L + LA V+ P + N Sbjct: 403 FNGFMSKWMIYQGTFLSGDGLLVFCGVMALFISAATLASFVKFYTTAFGGVPTKVTENAE 462 Query: 456 DLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTW 508 ++ L + L G IP +I +L ++ W Sbjct: 463 EVPSSMLVGKGFLAALCLLFGL-IPSSIIPLLLAPGKVLTGTDLSGWISTKYW 514 >UniRef50_Q52978 Probable K(+)/H(+) antiporter subunit A/B n=110 Tax=Bacteria RepID=PHAAB_RHIME Length = 999 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 134/533 (25%), Positives = 238/533 (44%), Gaps = 36/533 (6%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLL------ILALWVVQTAAD 59 + ++ +L P SL+ + A +L L+ + + V+ D Sbjct: 31 LLSVFILVPFAGSLIAIFFPSDQRGAISWFAGAIALVCFLVTAGLYPYVASGGVLHYRID 90 Query: 60 AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 L +DG LF A++ IG L +Y+ YM E + ++ F Sbjct: 91 WVPELGLNFTLRMDGFAWLFSALITAIGVLVALYARYYMAEED--------PVPRFFALF 142 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAF 178 F+ +ML VV S NLI++ E T++ S L+G + + + + A + I G Sbjct: 143 LAFMGSMLGVVLSGNLILLAVFWELTSIVSFLLIGYWHHNAHARDGARMALTITGTGGLA 202 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 G +++ S A +A ++ + L V +L+G TK+ FP Sbjct: 203 MFVGLIIIGKIVGSYELDAVLA-------SGDAIRNHPLYGTVLVLVLLGALTKSAQFPF 255 Query: 239 HAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSV 297 H WLP A + AP+PVSA L SA ++ + +L+R++ ++ G++ ++ + G+ ++ Sbjct: 256 HFWLPHAMA-APTPVSAYLHSATMVKAGVFLLVRFWPVM---AGTEAWFWIVGLAGLTTL 311 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 + A+F + Q+D+K LLAYS++ ++GL+ V L +G PL AA+ HI+NH+ K LF Sbjct: 312 LLGAYFAIFQQDLKGLLAYSTISHLGLITVLLSLGSPLAAVAAVFHIVNHATFKASLFMA 371 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 +G + + GTRD+ + G+ MP TA L + A+AG+P N FLS+ M + + Sbjct: 372 AGIIDHESGTRDIRRLGGLFHFMPITATLAMVASAAMAGVPLLNGFLSKEMFFAEAIETH 431 Query: 418 -----HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV--NRGDLGWLTTSPMVILLV 470 + + + + +R V +PP + + +P+ L++ Sbjct: 432 LVNPLDTVTPYVATIAGMFAVTYSLRFIHGVFFGRPPADLPRKPHEPPRWMRAPLDFLVL 491 Query: 471 MMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDF-LPSGTASVSEK 522 L +G Q + L A VL S WH + +P + V+ Sbjct: 492 ACLVVGIIPAQTIGPFLHTAVLSVLR-EGTPDYSLSVWHGWNIPLIMSFVALS 543 >UniRef50_B5EN60 Proton-translocating NADH-quinone oxidoreductase, chain L n=25 Tax=Proteobacteria RepID=B5EN60_ACIF5 Length = 660 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 126/528 (23%), Positives = 228/528 (43%), Gaps = 38/528 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA-GEIF 64 ++ ++ + PL+ +L+ R ++ L + LW G+++ Sbjct: 15 VYLVIPVAPLVGALVAGFWGWRLRDHAHWAPIIGVAIAFYLSLAVLWQTGHGITFYGDVY 74 Query: 65 --------AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 + ID L L L ++ + +Y++GYM + + ++ Sbjct: 75 TWAVLGHLPVSVGFDIDSLTALMLVVVTFVSLSVHLYTVGYMHGDPGY--------ARFF 126 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVG 175 + LF F+M+++V SNN + ++ EA L S L+G + QR S AA K I+ VG Sbjct: 127 SYIALFTFSMIMLVMSNNFLQLFFGWEAVGLVSYLLIGFWFQRESANVAAIKAFIVNRVG 186 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAI---FWSEVLKQSSLLDPTLMLLAFVFLLIGFGTK 232 L G VY S+ + A + L+ +++ + L +G K Sbjct: 187 DFGFLIGIAAVYHYCGSLDYRTVFAAVPHLIGQTLEIIPGHPWSVLTWIALLLFVGAMGK 246 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLI 291 + P+H WLP++ E P+P+SAL+ A ++ + ++ R I Q S ++LI Sbjct: 247 SAQVPLHVWLPESM-EGPTPISALIHAATMVTAGIFMVARMSPIFEQ---SATALSVVLI 302 Query: 292 FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAK 351 G ++ LVQ DIKR++AYS++ +G + LG AA+ H++ H+ K Sbjct: 303 IGAVTAFFMGLVGLVQNDIKRIIAYSTISQLGYMTAALGAS---AFSAAIFHLMTHAFFK 359 Query: 352 TLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 LLF +G+V+ +D+ + G+ K+MP T + F G+L+L+G+PPF F S+ + I Sbjct: 360 ALLFLAAGSVIHAMSNEQDIRKMGGLRKVMPITYITFLIGSLSLSGIPPFAGFFSKDLII 419 Query: 411 TAGLAR---NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLGWLTTS 463 A +L+ + RM V P + + W+ T Sbjct: 420 EAVGLSTLPGAGWAEWMLVAGAFVTALYTFRMFFLVFHGAPRMDAHTRAHLHESPWVITV 479 Query: 464 PMVILLVMMLAMGTHIPQPV-IRILAGASTIVLSGTHDLPAQRSTWHD 510 P++ L + + G PV + +S +V + + R+ W Sbjct: 480 PLIALAIPAVYAGWAYIGPVGLGHFLDSSLVVAPQWNTIGEIRAHWQG 527 >UniRef50_A6TVL4 NADH dehydrogenase (Quinone) n=2 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVL4_ALKMQ Length = 694 Score = 334 bits (858), Expect = 4e-90, Method: Composition-based stats. Identities = 129/506 (25%), Positives = 225/506 (44%), Gaps = 48/506 (9%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVV----QT 56 +++ + L+++ PL+ + K+ + R + V+ + +TLLL+LA++ + Sbjct: 84 LNFKALPLLVIMIPLVGGPIEAYIGKKSEN-LRDMAVVDTTFVTLLLVLAMYPQVAQGEM 142 Query: 57 AADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 ++ GL +D L + A GV+ FL IY+ YM E +Y Sbjct: 143 YYHLPKLLGYGLSFKVDMLSFIMAATAGVLWFLVSIYAHDYMGIENHRN--------RFY 194 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGV 176 + + +L V + +L M+ E T SS FLV + S+ A YI + G Sbjct: 195 LWMSVTFGGILGTVMAGDLFTMFLFFEIMTFSSYFLVAHNQSKESILAGNSYIYMGVAGG 254 Query: 177 AFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLF 236 L G +L+YA ++ E SE+ + L + GFG K G+ Sbjct: 255 LSILLGMILLYAYTGTL----EFIPLASEIKDLG-----WVKYLMTGLFVGGFGIKAGML 305 Query: 237 PMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNR--------- 287 P+H WLP AH AP+P SALLS +L+ ++R I ++ Sbjct: 306 PLHIWLPKAHPVAPTPASALLSGILIKVGAYGILRVSISFFVPSITEISGYADSLWEVSQ 365 Query: 288 ----LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAAL-- 341 +++ G++++ V F L Q ++K++LAY S+ MG + + +G+ LG A+ Sbjct: 366 KLGAVIIWIGIITMVVGVFMALQQSNMKKMLAYHSISQMGYIVMGIGVATYLGYKGAMGF 425 Query: 342 ----LHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGM 397 H++NH+L K LLF G V L+ D+ + GM + MPFTA L AL + GM Sbjct: 426 SGGIYHMVNHALFKALLFMVVGLVYLRTHELDMYKLGGMWRKMPFTAFLCIIAALGITGM 485 Query: 398 PPFNIFLSEFMTITAGLARNHL------LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA 451 P FN F S+ + A + ++ ++ + +++ + V + K P+ Sbjct: 486 PGFNGFASKSILHHAIIEAYEYGHPSFRYAEMIFTVVSAGTVCSFIKLFSFVFLGKCPEK 545 Query: 452 VNRGD-LGWLTTSPMVILLVMMLAMG 476 + + M L +M++A+G Sbjct: 546 YKDIEGEKGMMDLAMGGLALMIIAVG 571 >UniRef50_Q9XAR5 NADH-quinone oxidoreductase subunit L n=38 Tax=Actinomycetales RepID=NUOL_STRCO Length = 654 Score = 334 bits (858), Expect = 4e-90, Method: Composition-based stats. Identities = 119/517 (23%), Positives = 222/517 (42%), Gaps = 58/517 (11%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTV-TVLHSLGITLLLILALWVVQTAADAG--- 61 + ALL+ PLL +++ +R + T+L ++ L ++L ++ + A+ Sbjct: 4 LIALLVAAPLLGAVVLLCGGRRLDRVGHWIGTLLAAVSFVLGVVLFADLLGSGAEDRTLT 63 Query: 62 ---------EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 E F A + +D L F+ ++ +G L +YS+ YM H+ Sbjct: 64 QHLFSWIPVEGFQADVAFRLDQLSMTFVLLITGVGSLIHLYSVAYMEHDERRR------- 116 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIII 171 ++G+ +LFL ML++V ++N ++++ E L+S L+G + + S AA K ++ Sbjct: 117 -RFFGYLNLFLAAMLILVLADNYLLLYVGWEGVGLASYLLIGFWQHKPSAATAAKKAFLV 175 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 VG G +L++ + + L + D + + LL+ Sbjct: 176 NRVGDMGLSIGIMLMFLWFGTFAFGPVLGGHGEAGLAAGA--DEGKLTAIALMLLLAACG 233 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ P+ +WL DA E P+PVSAL+ A ++ + +++R I A + ++ Sbjct: 234 KSAQVPLQSWLGDAM-EGPTPVSALIHAATMVTAGVYLIVRSGAIFNGAPDAQL---VVT 289 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 I G +++ A + DIK+ LA S++ +G + + G+G P+G A++H++ H Sbjct: 290 IVGAVTLLFGAIVGCAKDDIKKALAGSTMSQIGYMVLAAGLG-PIGYVFAIMHLVTHGFF 348 Query: 351 KTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 K LF G+G+V+ D+ G+ K MP T V FG G LA+ G P + F S+ Sbjct: 349 KAGLFLGAGSVMHGMNDEVDMRRYGGLRKYMPVTFVTFGLGYLAIIGFPGLSGFFSKDKI 408 Query: 410 ITAGLARN---HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----------------- 449 I A A+ ++ LL + + R+ + Sbjct: 409 IEAAFAKGGTEGWILGACALLGAAITAYYMTRVMLMTFFGEERWRNAPTPSPAKPDVEPA 468 Query: 450 -------QAVNRGDLGWLTTSPMVILLVMMLAMGTHI 479 + + + L T PM++L V + G Sbjct: 469 AETRGTYEPPHPHESPGLMTIPMIVLAVGSVGAGAFF 505 >UniRef50_Q8M9U5 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=5 Tax=Viridiplantae RepID=NU5C_CHAGL Length = 670 Score = 334 bits (857), Expect = 5e-90, Method: Composition-based stats. Identities = 138/553 (24%), Positives = 236/553 (42%), Gaps = 51/553 (9%) Query: 3 YSVMFALLLLTPLLF-SLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG 61 Y+ + +L + P +F + + RK + + V + + L LIL+L Sbjct: 7 YAGLIPILPVFPSIFIGIGLMSFRKSFRNLRKFVGSMSIAFMFLTLILSLLFFNDQLSES 66 Query: 62 EIF------------AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSP 109 + + ID L + L ++ + IYS GYM H+ + Sbjct: 67 YSYRFLFPWLSTKNLTLDIGYLIDPLTSIMLVLVTSVAVTVMIYSDGYMLHDQGY----- 121 Query: 110 VTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKY 168 ++ + LF +ML ++ S NLI ++ E + S LVG + R + A K Sbjct: 122 ---IRFFAYLSLFTASMLGLIVSPNLIQVYVFWELIGMCSYLLVGFWSTRPTAASACQKA 178 Query: 169 IIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIG 228 I VG L G + Y S Q ++ L ++ L+ TL +++ V L +G Sbjct: 179 FITNRVGDFGLLLGILGFYWLTGSF--QFDIIQDRLNELLLTNNLNFTLFIISSVLLFLG 236 Query: 229 FGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNR 287 K+ FP+H WLPDA E P+P+SAL+ A ++ + ++ R I S Sbjct: 237 PIAKSAQFPLHIWLPDAM-EGPTPISALIHAATMVAAGIFLVARLLPIF---QLSPLLMI 292 Query: 288 LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNH 347 L+ G ++ + A + Q D+KR LAYS++ +G + + LGIG G AA+ H++ H Sbjct: 293 LIAFTGAITALLGACLAVAQTDLKRGLAYSTMSQLGYMMLGLGIG---GYQAAIFHLITH 349 Query: 348 SLAKTLLFCGSGNVLLKY---------GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMP 398 + +K LLF GSG+V+ +++++ + G+ K MP T V F G L+L G+P Sbjct: 350 AYSKALLFLGSGSVIHSMEPVVGYDPNKSQNIDYMGGLRKYMPITGVTFLIGTLSLCGIP 409 Query: 399 PFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVN----- 453 PF F S+ I + L+ + L L + R+ + N Sbjct: 410 PFACFWSKDEIIADAFF-HLPLLGFIAWLTAGLTGFYMFRLYLLTFEGEFRAHKNLKSSS 468 Query: 454 ---RGDLGWLTTSPMVILLVMMLAMG-THIPQPVIRILAGASTIVLSGTHDLPAQRSTWH 509 + + T P+++L+ + +G +P + I + + L G S W Sbjct: 469 LEYPHESSFSMTLPLILLMFPTIFIGFLGLPYNLGFIQSQILSTWLVGPSIDLNSSSNWI 528 Query: 510 DFLPSGTASVSEK 522 DF + SV Sbjct: 529 DFFKTSATSVGIA 541 >UniRef50_Q02CT3 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02CT3_SOLUE Length = 624 Score = 334 bits (857), Expect = 5e-90, Method: Composition-based stats. Identities = 115/498 (23%), Positives = 220/498 (44%), Gaps = 39/498 (7%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL------------- 51 + L+ + PL L+ ++ + + + S+ ++ L +L Sbjct: 1 MQLWLIPIFPLAGFLINGLFGRKFSKSLVSTVAVGSVVLSFLWVLKTISAMGDLNTPHLE 60 Query: 52 ----WVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGEL 107 W+ + G +D L + L ++ IG L IYSIGYM HE Sbjct: 61 HYFTWIQSGFPGSPNFVNIGCDFLVDRLTIVMLLVVTGIGSLIHIYSIGYMAHEHG---P 117 Query: 108 SPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAW 166 + ++ + +LF+F ML++V N ++++ E L S L+G Y + + A Sbjct: 118 NFGGFYRFFAYLNLFMFFMLVLVLGANYLLLFVGWEGVGLCSYLLIGFYFDKKFATNAGN 177 Query: 167 KYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLL 226 K I+ +G L++ + S+ ++EV ++ + + LL Sbjct: 178 KAFIVNRIGDFGFSLAMFLIFHHFGSLD--------FAEVFHKAPGGTEATLTTICLLLL 229 Query: 227 IGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFP 285 +G K+ P++ WLPDA + P+PVSAL+ A ++ + + R +++ A G+ Sbjct: 230 VGACGKSAQIPLYVWLPDAMA-GPTPVSALIHAATMVTAGVYMTARSWVLFTHAPGA--- 285 Query: 286 NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 ++ I G+ + +AA L Q DIK++ AYS+V +G + V +G G A + H++ Sbjct: 286 MDVMAIIGIATAFMAATIGLAQNDIKKVFAYSTVSQLGYMFVGVGSG---AFSAGVWHLV 342 Query: 346 NHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 H+ K LLF G+G+V+ G +D+ + G+ K +P T +A++G+PPF+ F Sbjct: 343 THAFFKALLFLGAGSVIHSLSGEQDMRNMGGLRKKIPITFWTMACAWVAISGIPPFSGFF 402 Query: 405 SEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSP 464 S+ + A +H + + ++ L + R + + + + +P Sbjct: 403 SKDAILVAAYQHSHAIYW-IGVITAELTAFYVSRAMFMTFFGEYRGKAHPHESPAVMWAP 461 Query: 465 MVILLVMMLAMGTHIPQP 482 + +L V+ L G P Sbjct: 462 LAVLAVLSLIGGMVFNIP 479 >UniRef50_Q28T51 Proton-translocating NADH-quinone oxidoreductase chain L n=270 Tax=cellular organisms RepID=Q28T51_JANSC Length = 711 Score = 334 bits (857), Expect = 6e-90, Method: Composition-based stats. Identities = 125/505 (24%), Positives = 210/505 (41%), Gaps = 45/505 (8%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI-- 63 M +LL PL+ +L+C RL + V+ + G L L WVV + Sbjct: 1 METILLFAPLVGALIC--GFSWRLIGEQAACVIAT-GFLFLSCLLSWVVFIGFEGETYTR 57 Query: 64 ----------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 + +D L + L ++ + L +YS GYM H+ E Sbjct: 58 SLFTWIESGTLFTDWAIRVDRLTAIMLIVITSVSALVHLYSFGYMAHDENFKE-GESYRP 116 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIIC 172 ++ + F FTML++VT++NL+ ++ E ++S L+G Y ++ S AA K I+ Sbjct: 117 RFFAYLSFFTFTMLMLVTADNLLQLFFGWEGVGVASYLLIGFYFRKPSAGAAAMKAFIVN 176 Query: 173 TVGVAFGLFGTVLVYANAASVMPQA--EMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 VG L G ++ S+ M +E+ ++ L IG Sbjct: 177 RVGDFGFLLGIFALFWMTDSIQFDVVLGMGAELAEMSIIFLGMELNAAETIAFLLFIGAM 236 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ +H WLPDA E P+PVSAL+ A ++ + ++ R +I A + Sbjct: 237 GKSAQLLLHVWLPDAM-EGPTPVSALIHAATMVTAGVFLVCRMSPVIEYA---PLAGNFI 292 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 +I G LS VAA LVQ DIKR++AYS++ +G + V G+G A+ H+L H+ Sbjct: 293 IIIGALSAFVAATIGLVQNDIKRVIAYSTMSQLGYMFVAAGVGV---YSVAMFHLLTHAF 349 Query: 350 AKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALAL--AGMP-------- 398 K +LF G+G+V+ + +D+ G+ K +P+T G LA+ G+P Sbjct: 350 FKAMLFLGAGSVIHAMHHEQDMRNYGGLRKKIPYTFWAMMIGTLAITGVGIPLLYVGFPV 409 Query: 399 PFNIFLSEFMTITAGLARN---HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QA 451 F F+S+ I + A L++ R+ + Sbjct: 410 GFAGFVSKDAVIESAYAFGGDLGQFAFWALVIGALFTSFYSWRLMFLTFYGEARGNKHTH 469 Query: 452 VNRGDLGWLTTSPMVILLVMMLAMG 476 + + P+ L + + G Sbjct: 470 EHAHESPMTMLIPLGALAIGAVVAG 494 >UniRef50_P31971 NAD(P)H-quinone oxidoreductase chain 5 n=25 Tax=cellular organisms RepID=NU5C_SYNP2 Length = 664 Score = 334 bits (856), Expect = 7e-90, Method: Composition-based stats. Identities = 122/519 (23%), Positives = 210/519 (40%), Gaps = 67/519 (12%) Query: 8 ALLLLTPLLFS------LLCFACRKRRLSATRTVTVLHSLGITLLLILAL---------- 51 L+ + PLL + L+ +L V VL +G ++ L L Sbjct: 9 WLIPVLPLLGAMVIGIGLISLNKFTNKLRQLNAVFVLSLIGTSMALSFGLLWSQIQGHEA 68 Query: 52 WVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 + A F + +D L L I+ + L IY+ GYM H+ + Sbjct: 69 FTYTLEWAAAGDFHLQMGYTVDHLSALMSVIVTTVALLVMIYTDGYMAHDPGY------- 121 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYII 170 +Y + +F +ML +V S NL+ ++ E + S L+G + R ++ +A K + Sbjct: 122 -VRFYAYLSIFSSSMLGLVFSPNLVQVYIFWELVGMCSYLLIGFWYDRKAAADACQKAFV 180 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 VG L G + +Y S L + + L ++ V + +G Sbjct: 181 TNRVGDFGLLLGMLGLYWATGSFEFDLMGDRLMD--LVSTGQISSLLAIVFAVLVFLGPV 238 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ FP+H WLPDA E P+P+SAL+ A ++ + ++ R Y + + ++ Sbjct: 239 AKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARMYPVFEPIPEA---MNVI 294 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 G + + A L Q DIK+ LAYS++ +G + + +GIG G A L H++ H+ Sbjct: 295 AWTGATTAFLGATIALTQNDIKKGLAYSTMSQLGYMVMAMGIG---GYTAGLFHLMTHAY 351 Query: 350 AKTLLFCGSGNVLLKYGT---------RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 K +LF GSG+V+ +D+ ++ G+ K MP TA F G LA+ G+PPF Sbjct: 352 FKAMLFLGSGSVIHGMEEVVGHNAVLAQDMRLMGGLRKYMPITATTFLIGTLAICGIPPF 411 Query: 401 NIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK------------- 447 F S+ + N +L + + + RM + Sbjct: 412 AGFWSKDEILGLAFEANPVLWF-IGWATAGMTAFYMFRMYFLTFEGEFRGTDQQLQEKLL 470 Query: 448 ------PPQAV---NRGDLGWLTTSPMVILLVMMLAMGT 477 P + + T P++ L V + +G Sbjct: 471 TAAGQAPEEGHHGSKPHESPLTMTFPLMALAVPSVLIGL 509 >UniRef50_B2V8R3 NADH dehydrogenase (Quinone) n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V8R3_SULSY Length = 484 Score = 333 bits (855), Expect = 9e-90, Method: Composition-based stats. Identities = 162/456 (35%), Positives = 274/456 (60%), Gaps = 6/456 (1%) Query: 41 LGITLLLILALWVVQTAADAGE--IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYM 98 +GIT + ++ + + + + + I+ L +D L + L ++ I F +YS+GYM Sbjct: 28 IGITFINLILGYSLISKINNPQDRIYELNSLLFLDSLNSILLLVILTISFFVSVYSVGYM 87 Query: 99 RHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ 158 + E+ G +S + +YY + +LF+F ML+V SNN ++W AIE TTL++AFL+ Y Sbjct: 88 KREL-KGGISEKKVNEYYFWMNLFIFAMLVVTLSNNFGILWIAIEGTTLATAFLISYYRN 146 Query: 159 RSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLM 218 + ++EA WKYI++C++G+ LFG +L+Y ++ SV+ ++ W+ + SS L+P L+ Sbjct: 147 KEAVEAGWKYIMLCSIGIGLALFGIILLYYSSFSVLGHGLQSLNWTNIYDVSSRLNPKLL 206 Query: 219 LLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQ 278 +LAF+F+L+GFGTK G P+H WLPDAHS+AP+P+SAL+S VLLNCA ++R II Sbjct: 207 MLAFIFVLVGFGTKVGFAPLHFWLPDAHSQAPTPISALMSGVLLNCAFYSILRVQAIINN 266 Query: 279 AIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIF 338 ++ L+ FG+L+V V+A FI+ Q D KRLLAYSS+E+M ++A + L IF Sbjct: 267 NGYGYNTSKYLMFFGVLTVVVSALFIIRQVDYKRLLAYSSMEHMAIIAFAFSVNTKLSIF 326 Query: 339 AALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMP 398 A + H++NH++ KT +F G++L + TRD+ + G+ K +P+T++ A+ G P Sbjct: 327 AGVYHLINHAIVKTSIFMTVGSILTSFHTRDIFSIRGLFKALPYTSIALILSMFAITGTP 386 Query: 399 PFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLG 458 PF+IF+S+ + + ++ ++L+L L L+ G + +LM + Sbjct: 387 PFSIFMSKLFILISSFKAGFIIPSIILMLALVLIFGGFIYHFLNMLMGDTDKRYKE---D 443 Query: 459 WLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIV 494 L P +LL + L + +IP+ V+ ++ I+ Sbjct: 444 LLILLPPFVLLFLSLVLSFYIPEKVLMLINNIPEIL 479 >UniRef50_C9RKX6 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKX6_FIBSS Length = 651 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 133/546 (24%), Positives = 227/546 (41%), Gaps = 47/546 (8%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI---- 63 L+LL PL+ ++ + + + + G+ L ++D Sbjct: 9 YLILLFPLITFVVNGLFLGNKCAKAAAIFAVICNGLAFAAAGTLAFHYFSSDFAPQKAIL 68 Query: 64 -----------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 A + + +D L + L ++ I F+ IYSIGYMR + A G Sbjct: 69 FDHTFIPFIGDLVARIGMLVDPLSVMMLVVVTFISFMVNIYSIGYMREDRAAG------- 121 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWK-YIII 171 ++ LF F+ML +V + NL M+ E +SS L+G + + S +A K I+ Sbjct: 122 -RFFALLSLFSFSMLGLVIATNLFQMFIFWELVGVSSYLLIGFWYHKPSAVSASKQAFIL 180 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQS------SLLDPTLMLLAFVFL 225 +F L G VLV S ++ + KQ ++ ++L + + Sbjct: 181 TRFADSFFLLGIVLVSYVVGSFDFSTLNSLSLIDFQKQFINLGLVTIPKSEALVLGSILI 240 Query: 226 LIGFGTKTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDF 284 G K+ +FPMH WLP+A E P+PVS+++ SA ++ + ++ R + D Sbjct: 241 FTGGWGKSAMFPMHIWLPNAM-EGPTPVSSIIHSATMVVAGVYLVARLFPFFAIC---DN 296 Query: 285 PNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELG------IGGPLGIF 338 L++ G ++ AA Q+DIKR+LAYS++ +G + LG + G Sbjct: 297 ALTLIMWVGAFTMVFAAVIACTQKDIKRILAYSTLSQLGYMMFALGACKIGQVVAVTGWT 356 Query: 339 AALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMP 398 A+ HI H+ K LF +G+++ + GT DL+ + G+ K M T LA++G+P Sbjct: 357 ASTFHIFTHAFFKCSLFLIAGSLIHQVGTNDLDAMGGLGKKMKLTYACTLISILAISGIP 416 Query: 399 PFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA---VNRG 455 PF+ F S+ I A +H ++ L LL L + R+ P Sbjct: 417 PFSGFFSKDEIILAAFQGHHYVVFGLALLTSGLTTFYMFRLFFLAFHGAPRHEGVKAGHV 476 Query: 456 DLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSG 515 + T P+ IL + L G + L+ + + W F+ G Sbjct: 477 HEDFAMTLPIAILAIPALLSGVLGKGIFEQFFVPGQ---LNVPQLVRLDHAEWLPFVAVG 533 Query: 516 TASVSE 521 A V+ Sbjct: 534 IAVVAL 539 >UniRef50_A0AL63 Complete genome n=20 Tax=Bacillales RepID=A0AL63_LISW6 Length = 802 Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats. Identities = 144/543 (26%), Positives = 238/543 (43%), Gaps = 53/543 (9%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWV----VQTAADAGE 62 L +L P + +LL + VL I + L T Sbjct: 4 LHLAILLPFIVALLIPLFYRWTKQVHTGWLVLPIPVILFIYFLTFIPKTMHEATIVSMPW 63 Query: 63 IFAAGLWL--HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 I G+ +DGL LF ++ IG L YSI Y+ + L ++Y F Sbjct: 64 IPRLGINFTVVVDGLSLLFALLITGIGSLVTFYSIYYLGKKKER-------LSNFYTFLF 116 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFG 179 +F+ ML VV S+NLIV++ E T++SS L+G + R S A K ++I G Sbjct: 117 MFMTAMLGVVLSDNLIVLYLFWELTSISSFLLIGYWYHRERSRYGARKSMMITVFGGLMM 176 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L G +L++ + S +A + ++++ +SL P A + +L+G TK+ P H Sbjct: 177 LGGFILLHIMSDSFSIRAIIQN--ADIISHNSLFIP-----AMILVLLGAFTKSAQVPFH 229 Query: 240 AWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 WLPDA EAP+PVSA L SA ++ + ++ R+ + S + + G+ ++ Sbjct: 230 IWLPDAM-EAPTPVSAYLHSATMVKAGIYIVARFTPLFAS---SGVWFWTVSLVGITTLF 285 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGP-------------LGIFAALLHIL 345 + + D+K +LAYS++ +G++ LG+G + I AA+ H+ Sbjct: 286 WGSLNATKKNDLKAILAYSTISQLGMIMALLGVGAASLHFDTLSDDIYVMAIVAAVFHLF 345 Query: 346 NHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 NH+ K LF G V + GTRD+ + G+++IMP TA + G A+AG+PPFN FLS Sbjct: 346 NHATFKGSLFMMVGIVDHETGTRDIRRLGGLMRIMPITATIAFIGTFAMAGIPPFNGFLS 405 Query: 406 EFMTITAGLARNHL----------LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ---AV 452 + M + + HL L+ V+ + + + + K Sbjct: 406 KEMFFESMINITHLQLFDASTWGILLPVVAWVASVFTFVYSMIIFFKTFTGKVKPFLLPK 465 Query: 453 NRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSG-THDLPAQRSTWHDF 511 + + P +IL + ++ +G IL A ++ G D S WH F Sbjct: 466 KPHEAPFGLLLPPIILSIFVVLIGLFPNLIAKPILEPAVRAIVPGLATDFSIHISLWHGF 525 Query: 512 LPS 514 P+ Sbjct: 526 TPA 528 >UniRef50_Q67NV3 Na+/H+ antiporter subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67NV3_SYMTH Length = 754 Score = 332 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 146/492 (29%), Positives = 236/492 (47%), Gaps = 24/492 (4%) Query: 27 RRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVI 86 R L V +T +L++ + L +H+DG G LF ++ I Sbjct: 7 RWLRWRLGVAATAVAAVTFVLVVLTPEMSLVIPWVPQLGIDLSIHVDGWGRLFALLIAGI 66 Query: 87 GFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATT 146 G L +YSI Y+ G+ +Y + LF+ ML VV + NL++M+ E T+ Sbjct: 67 GTLVVLYSIPYLGAREDLGK--------FYAYLLLFMGAMLGVVYAGNLMLMYVFWELTS 118 Query: 147 LSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSE 205 +SS L+G + R + A K I+I G L G ++ + A +A Sbjct: 119 ISSFLLIGFWNTRDDAQYGALKAILITFGGGLCMLGGLAILGTVGGTFELSALLA----- 173 Query: 206 VLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLNC 264 KQ+ LL L+ +A V LLIG TK+ FP H WLPDA + AP+PVSA L SA ++ Sbjct: 174 --KQAELLGHPLVTVALVLLLIGAFTKSAQFPFHIWLPDAMA-APTPVSAYLHSATMVKA 230 Query: 265 ALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGL 324 L ++ R + I ++ GM+++ V +F + + D+K +LA S++ +GL Sbjct: 231 GLYLIGRLWPIFHTH---PLWVPVVAAVGMVTMVVGSFLAVQKTDLKAVLALSTISQLGL 287 Query: 325 VAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTA 384 + G+G P AA H+LNHS K LLF G + + GTR++ ++ G+ + MP +A Sbjct: 288 IMWLFGLGTPEATQAAAFHLLNHSTFKALLFMVVGIIDHQTGTREIPLLSGLRRAMPVSA 347 Query: 385 VLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLL-LLTLVLAGLVRMAARV 443 L GA ++AG+P N FLS+ M +TA + L+ L + + ++ Sbjct: 348 GLAMVGAASMAGVPLLNGFLSKEMFLTAVHGSSMGAAGALVATGASLLTTLYCLILGHKI 407 Query: 444 LMAKPPQAVNRGDLG-WLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLP 502 +P + + + G P ++L V+++A+G + I+ A VL G DLP Sbjct: 408 WFGEPHETPDVPEEGSPSILVPPLLLAVIIVAVGIYPGLVESAIVTPAVAAVLQGPADLP 467 Query: 503 AQRSTWHDFLPS 514 + WH F P+ Sbjct: 468 -HIALWHGFTPA 478 >UniRef50_A8LTG8 NADH dehydrogenase (Quinone) n=58 Tax=Proteobacteria RepID=A8LTG8_DINSH Length = 969 Score = 332 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 141/526 (26%), Positives = 241/526 (45%), Gaps = 34/526 (6%) Query: 7 FALLLLTPLLFSLLC-FACRKRRLSATRTVTVLHSLGITLLLILALWVVQ---TAADAGE 62 ++ L P L +L+ R R + V +L +LLIL+ V++ A+ G Sbjct: 8 LFIIALLPFLGALVPGLMIRAGRTACASFTAVPTALAFIMLLILSPAVLRGEVITAEIGW 67 Query: 63 IFAAGLW--LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 + GL +DGLG LF ++ +G L +Y+ Y+ + G+ +Y + Sbjct: 68 LPQLGLSASFFLDGLGLLFALMITGVGLLIILYARFYLSGDDPMGQ--------FYTYLL 119 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 LF ML +V S+N++++ E T+LSS L+G + + + T + Sbjct: 120 LFQGAMLGIVLSDNILLLLIFWELTSLSSFLLIGYWKHLPEGRQGARMALAVTGAGGLAM 179 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 G +L+ N ++ ++ L A + +L+G TK+ FP H Sbjct: 180 IGGMLILGNIVGSYNLTDILQAGEQIRASEWYLP------ALILILLGAFTKSAQFPFHF 233 Query: 241 WLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLP A + AP+PVSA L SA ++ + ++ R + ++ G+D ++ G++++ + Sbjct: 234 WLPHAMA-APTPVSAYLHSATMVKAGVFLMARMWPVL---AGTDAWFYIVATTGLVTMVM 289 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 A L + D+K LLA+S+V ++GL+ + LG G AA+ HI+NH K LF +G Sbjct: 290 GAGIALFKDDLKALLAFSTVSHLGLLTMLLGFGTQAAAVAAVFHIINHLTFKAALFMTAG 349 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT----AGLA 415 V + TRD+ + G+ +MP T + AL++AG+P FN FLS+ M + G Sbjct: 350 IVDHETHTRDIKRLGGLRHLMPITFAIGTVAALSMAGIPLFNGFLSKEMMLEEASHTGWL 409 Query: 416 RNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA--VNRGDLGWLTTSPMVILLVMML 473 N ++ V+ L +A R V + D + + +L+V++L Sbjct: 410 GNPWVVPVVATFGALLSVAYSFRFIGHVFLGPVRDDYPAKPHDPPFGMWASPALLVVLVL 469 Query: 474 AMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASV 519 +G P I+ AS+ V DL WH F P+ SV Sbjct: 470 VIGMA-PFVAEGIVTAASSAVTG--ADLHPHLKIWHGFTPALWMSV 512 >UniRef50_C1SM60 NADH dehydrogenase subunit L n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM60_9BACT Length = 638 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 116/495 (23%), Positives = 221/495 (44%), Gaps = 35/495 (7%) Query: 9 LLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE------ 62 L LL PL+ L+ +R + + + + ++ + L L+ + + + + Sbjct: 6 LTLLGPLVAFLINGLLGRRYIKNLAPIVAIAGVSVSFVCALILFYLVSQGFSVDGTLYTW 65 Query: 63 ----IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 + + +D L + L ++ I + IYSIGYM + ++ + Sbjct: 66 VVAGKLSIPFGILVDPLSSIMLIVVTTISLMVHIYSIGYMHGDPG--------FWRFFTY 117 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYIIICTVGVA 177 +F +ML++V NN ++++ E LSS L+G + ++S+ +A K ++ +G Sbjct: 118 LSVFTLSMLVLVLGNNFLMLFVGWELVGLSSYLLIGFWFHKKSAADACKKAFVMNRIGDF 177 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLL----DPTLMLLAFVFLLIGFGTKT 233 G +LV SV +K++ + +L+ L L G K+ Sbjct: 178 GFYIGLLLVIVTFRSVNYSDAFNSEAIHHIKEAGFMLFGMKVSLIDLMTFGLFCGAMGKS 237 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 FP+H WLPDA E P+PVSAL+ A ++ + ++ R + +A ++ ++ Sbjct: 238 AQFPLHTWLPDAM-EGPTPVSALIHAATMVTAGVYMVARCNALFSEA---HMTSQFIVFA 293 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G ++ + A L Q D+KR+LAYS+V +G + + G+G AA+ H+ H++ K Sbjct: 294 GAMTAFLGASIGLTQYDLKRILAYSTVSQLGYMIMATGVG---AYVAAIFHLFTHAMFKG 350 Query: 353 LLFCGSGNVLLKYGTR-DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 LLF SG+V+ + D+ ++ G+ K MPFT + G +A+AG+PP F S+ + Sbjct: 351 LLFLCSGSVMHAMHDQLDVRLMGGLKKKMPFTHWTYLIGCIAIAGIPPLAGFWSKDEILA 410 Query: 412 AGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV---NRGDLGWLTTSPMVIL 468 A H + + + + + R V P + + + P+V L Sbjct: 411 MTFASGHNIAWFVGTAVAGMTAFYMFRSYFLVFQGTPRDQHLHDHAHESPFSMWGPLVFL 470 Query: 469 LVMMLAMGTHIPQPV 483 + + +G P+ Sbjct: 471 AFLSIFVGLVFGYPL 485 >UniRef50_Q12ZH7 Na+/H+ antiporter subunit n=2 Tax=Methanosarcinaceae RepID=Q12ZH7_METBU Length = 788 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 129/536 (24%), Positives = 228/536 (42%), Gaps = 40/536 (7%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHS------LGITLLLILALWVV 54 M + + P +F+ L K + +G+ ++ ++ Sbjct: 1 MDSFNAITVAIFLPFIFAGLVPVMEKLLKQRVGWFAAATALASFALIGMAATEVIEGQII 60 Query: 55 QTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 Q + ++ DGL + I IG L YS GYM L Sbjct: 61 QGSISWIPSAGVNFTIYADGLATMIGFIASGIGVLIMSYSNGYMSRTE--------DLTR 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICT 173 YY + LF+ +M+ +V S N I ++ E T+++S L+G + + S+ A K +++ Sbjct: 113 YYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHKPESIYGATKSLLLTA 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 G L G +L+ S E+A ++ +++ + L L+ + +LIG K+ Sbjct: 173 SGGLAMLAGFLLLGNITGSF----ELAAILNDPQVINAIKEHELFLITLILILIGAAAKS 228 Query: 234 GLFPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 P + WLP+A EAP+PVSA L SA ++ + ++ R + I G++ L+ Sbjct: 229 AQGPFYIWLPNAM-EAPTPVSAFLHSATMVKAGIYLVARIHPIF---SGTEAWFILVSGT 284 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGP----LGIFAALLHILNHS 348 G++++ VA F Q DIK +LAYS++ + + G +G+ AA H+LNH+ Sbjct: 285 GIITMLVAGFLAFRQTDIKGILAYSTISQLAYMMTMYGYTTHHEPGIGVAAATFHLLNHA 344 Query: 349 LAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 K LF +G V + TRD+ + G+ + MP T ++ LA+AG+PP N FLS+ M Sbjct: 345 AFKACLFLVAGIVAHEAATRDIRKLGGLRREMPITFIIACIAGLAMAGIPPLNGFLSKEM 404 Query: 409 TITAGLARNH-------LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ---AVNRGDLG 458 + + LI +L A +++ + + + + + + Sbjct: 405 FYESSIEMGASIGGIFTFLIPAFAVLGGVFTFAYSIKLIDGIFLGERDKNAIPHHIHEPP 464 Query: 459 WLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPS 514 P L +++ G P I+ A + +L T L WH F S Sbjct: 465 MTMLIPPAFLAFLVILFGVIPSLPTHYIIEPAVSGILLETAHL--HVKLWHGFTAS 518 >UniRef50_Q895D8 Sodium/proton antiporter shaA n=1 Tax=Clostridium tetani RepID=Q895D8_CLOTE Length = 486 Score = 331 bits (850), Expect = 3e-89, Method: Composition-based stats. Identities = 131/503 (26%), Positives = 243/503 (48%), Gaps = 30/503 (5%) Query: 6 MFALLLLTPLLFSLLC--FACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI 63 M ++L P+LF ++ F R R V ++ + L I+ ++ + A + Sbjct: 1 MNTAIVLIPILFPMVIAIFIGFGRFRENIRNSIVAITVFLNLFFIIYIFKNKGTAFFTVV 60 Query: 64 ---FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 ++L ID LG F ++ ++ T YS+ YM+HE ++ FF Sbjct: 61 KINEFLDIYLKIDKLGVFFSLLVSILWIFTSFYSMEYMKHEGKEN--------RFFAFFL 112 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 + L L + S NL+ ++ E TL++ LV G R +L++ KY+I VG F L Sbjct: 113 VTLGVTLGISFSGNLVTLYLFYEVLTLATFPLVIHSGSREALKSGRKYLIYSFVGATFVL 172 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 G + ++A + F+ + + + L+ TL+ +++ + +GFG K L P H+ Sbjct: 173 LGMIFLFAVTKGLD-------FYPKGIIRDFKLNKTLISTSYIVMFLGFGVKAALVPFHS 225 Query: 241 WLPDAHSEAPSPVSALLSAV-LLNCALLVLIR--YYIIICQAIGSDFPNRLLLIFGMLSV 297 WLP A AP+PVS+LL AV ++ + LIR YY+ + + + + LL+F +S+ Sbjct: 226 WLPKAMV-APTPVSSLLHAVAVVKSGVFALIRITYYVFGGEIVKLIYGRKYLLLFVTISI 284 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 + +F L Q ++K+ LAYS++ +G + + + I + LLH++NH++ K LF Sbjct: 285 LMGSFLALHQSNLKKRLAYSTISQLGYILLGILILNGNSLVGGLLHLINHAVIKITLFFC 344 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 G ++ G D++ + G+ K MP+T F +++L G+PP N F+S++ GL Sbjct: 345 VGTIMYTRGKTDIDEIKGIGKEMPYTMWCFTISSISLIGIPPTNGFVSKWYLAQGGLLEG 404 Query: 418 HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP-----QAVNRGDLGWLTTSPMVILLVMM 472 ++ +LL+ L L+ + K + + + P++++ + Sbjct: 405 KVIFPAILLISALLTAMYLLPIITVAFFKKDEQHKNVEKIEIKEAPKNMLVPIILITCIT 464 Query: 473 LAMGTHIPQPVIRILAGASTIVL 495 + +G + P PV+ L S V+ Sbjct: 465 IVLGLY-PNPVLNFLLEISKEVI 486 >UniRef50_D1B460 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Campylobacteraceae RepID=D1B460_SULD5 Length = 489 Score = 331 bits (850), Expect = 4e-89, Method: Composition-based stats. Identities = 170/492 (34%), Positives = 286/492 (58%), Gaps = 7/492 (1%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAA 66 L+L+ P++ S++ F +R ++V ++ S ++ L++A + E+FA Sbjct: 4 LILILIVPMVCSIIMFCMP-QRFKVLQSVHIVLSFIVSFFLLMA---ISDVVKGNELFAF 59 Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 +L +D +G +FL+++ + G L +Y+ YM+ E+ G ++ + +Y+ +F +TM Sbjct: 60 EHFLFLDAMGAIFLSLIAITGLLVNVYATTYMKWELEEGHMNVREVKNYFALSFIFTWTM 119 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLV 186 L V NN+ MWAAIEATTL+S FLV + + S E+ +KYI++C++G+AF L+ T+L+ Sbjct: 120 SLSVLCNNIAFMWAAIEATTLASVFLVAVKNDKKSTESGYKYIVLCSIGLAFALYATILL 179 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 ++ A A+ ++ +L + L+D + L FV LIGFGTK G P H WLPD H Sbjct: 180 FSAANG--NVEGDAMLYTNLLAHADLIDKEALKLIFVLALIGFGTKAGFAPTHTWLPDVH 237 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILV 306 +E P+P SALLS +LL CALL L+RYY I+ +G DF ++++ L++ ++AFF++ Sbjct: 238 AEGPAPTSALLSGILLKCALLGLVRYYAIVANGVGFDFVESVMIVSATLTLFISAFFLIR 297 Query: 307 QRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG 366 Q ++KR+ AY SV +MG++A LG+GG +G+FAAL H + HS K L FC +GN+ YG Sbjct: 298 QHNVKRMFAYHSVAHMGVIAFGLGVGGAIGLFAALFHCVAHSFTKALAFCSTGNIARIYG 357 Query: 367 TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLL 426 T+D+ + GM++I P TAVLFG +L G+P F IF+SEF+ A +++ + Sbjct: 358 TKDMTKMGGMIRIAPLTAVLFGIAICSLVGVPGFAIFVSEFLIFKAAAIDGKYVLMGIFA 417 Query: 427 LLLTLVLAG-LVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIR 485 L L ++ + + G++ P++ L V+++A G + + Sbjct: 418 LALAIIFIADFSHFFLAAFGKVEGKVEHHGEMKLSENLPLIALAVLIVAFGVWQFESLTF 477 Query: 486 ILAGASTIVLSG 497 +L + +L Sbjct: 478 LLNESVKSILKQ 489 >UniRef50_B8J1C9 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Bacteria RepID=B8J1C9_DESDA Length = 642 Score = 331 bits (849), Expect = 4e-89, Method: Composition-based stats. Identities = 104/426 (24%), Positives = 186/426 (43%), Gaps = 27/426 (6%) Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 + +D L + L ++ + L IYS+GYM+ E + ++ + LF Sbjct: 71 LSVSFGFLVDQLTAVMLIVVTSVSTLVHIYSVGYMKGEDGY--------YRFFAYLALFS 122 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVGVAFGLFG 182 F+ML++V SNN + ++ EA LSS L+G Y +++S +A K I+ G L G Sbjct: 123 FSMLMLVLSNNFLQLFFGWEAVGLSSYLLIGFYYEKTSASDAGKKAFIVNRFGDFGFLLG 182 Query: 183 TVLVYANAASVMPQAEMAI--FWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 ++ S+ A + + L + L G K+ P+H Sbjct: 183 LFCIFTLFGSLHYDNVFARAGLLQGLSYTIGGISIDAATLVCLLLFCGAAGKSAQLPLHV 242 Query: 241 WLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLPDA E P+PVSAL+ A ++ + ++ R + S ++ + G L+ Sbjct: 243 WLPDAM-EGPTPVSALIHAATMVTAGVFLVARCNALF---SLSPTALGVITVVGALTALF 298 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 AA L Q DIKR++AYS++ + + + G+G A + H+ H+ K LLF G G Sbjct: 299 AATIALTQTDIKRVVAYSTISQLAFMFIGCGVG---AYAAGIFHLFTHAFFKALLFLGCG 355 Query: 360 NVLL-KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN- 417 +V+L + +D+ + G+ K MP T V F +L+++G+P F S+ + + Sbjct: 356 SVILGMHHEQDMRRMGGLRKYMPVTCVTFLLASLSISGVPGLAGFFSKDEILLMAFNADT 415 Query: 418 --HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLGWLTTSPMVILLVM 471 + + L R+ + + Q + + + T P+++L Sbjct: 416 TAGYFAWGVGTFVAFLTAFYSFRLFFSIFYGEFRGTQHQREHLRESPLVVTIPLLLLACG 475 Query: 472 MLAMGT 477 + G Sbjct: 476 AVGAGW 481 >UniRef50_A7GV43 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=Bacillaceae RepID=A7GV43_BACCN Length = 620 Score = 331 bits (849), Expect = 4e-89, Method: Composition-based stats. Identities = 130/479 (27%), Positives = 222/479 (46%), Gaps = 31/479 (6%) Query: 8 ALLLLTPLLFSLLCFACRKRRL---SATRTVTVLHSLGITLLLILALWVVQTAADAGEIF 64 L+ L PL +L ++ S ++ SL ++++L + + Sbjct: 6 WLIPLFPLASFMLLILFGRKLKGISSLLGSLFAFLSLVGAVIVLLERFSSENVKHTWLWL 65 Query: 65 AAG-----LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 AG ++ L L L I+ + FL +Y+ GYM+ + L +Y + Sbjct: 66 KAGSVDISFGFEVNALNALMLLIVTTVSFLVHVYAKGYMQGDE--------RLSVFYAYL 117 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAWKYIIICTVGVAF 178 LF F ML +V S NL+ ++ E L S L+G Y + + AA K I+ +G A Sbjct: 118 GLFTFAMLGLVISTNLLQLYVFWELVGLGSFLLIGFYFFKEEAKAAAQKAFIMTRIGDAC 177 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 G +L++ A S +E + P+++ L +F+ IG K+G FP+ Sbjct: 178 LFIGMILLFWQAGSFDYDVIFKAVQTEAI------SPSIITLTALFIFIGAVGKSGQFPL 231 Query: 239 HAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSV 297 H WLPDA E P+PVSAL+ A ++ + ++ + + + S + + I G + Sbjct: 232 HTWLPDAM-EGPTPVSALIHAATMVAAGVYLVAAMFPLF---VASPVAMQTVAIVGGFTA 287 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 AA LVQ DIKR+LAYS+V +G + + LG G A++ H+ H+ K LLF Sbjct: 288 IFAASIALVQTDIKRILAYSTVSQLGYMMLALG---SAGYVASIFHLTTHAFFKALLFLA 344 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 +G+V+ T++++ + G+ K M T +LF G A++G+P F+ F S+ + A Sbjct: 345 AGSVIHAVHTQNIHEMGGLQKKMKVTGLLFLVGTFAISGVPFFSGFFSKDEILMATWMHG 404 Query: 418 HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMG 476 + ++ VL +L L + R+ V + + + T PM L V +A+G Sbjct: 405 NYVLFVLAILATFLTSFYMFRLYFLVFTGEERAKREVRESPRIMTLPMTALGVFAVAIG 463 >UniRef50_B2A694 NADH dehydrogenase (Quinone) n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A694_NATTJ Length = 748 Score = 331 bits (849), Expect = 4e-89, Method: Composition-based stats. Identities = 118/476 (24%), Positives = 209/476 (43%), Gaps = 43/476 (9%) Query: 2 SYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA---A 58 S++ L++ PLL S TV+ S +LL + +VQ Sbjct: 11 FTSILPILIIFVPLLGSFGVILISSVSEKLRDIYTVIISAVPLVLLAVMYPLVQQGIVQY 70 Query: 59 DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 + GL +D LG LF A++ +I FL +Y+ Y+ HE +Y F Sbjct: 71 NIEWFLEIGLIFRLDSLGFLFTALISLIWFLATLYATEYISHEHNRN--------RFYFF 122 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAF 178 + L V + +L ++ E +L+S LV + ++ A ++ + G Sbjct: 123 WLFTFGATLGVFVTGDLFGLFVFFEMMSLTSYVLVIHEEDKDAMRAGNLFLFLGIGGGLA 182 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 LFG ++Y N ++ + + + + + + +IGFG K G+ P+ Sbjct: 183 ILFGLFIMYFNLETLEIAPMLGDMVAAGVN---------IPVLLLLFIIGFGIKAGIVPL 233 Query: 239 HAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDF----------PNRL 288 H WLP AH AP+P SA+LS +L+ + L R ++++ S Sbjct: 234 HIWLPKAHPVAPTPASAILSGLLIKTGVYGLWRVFLMVMGPASSQEVELYQQYITNWGMG 293 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG------GPLGIFAALL 342 L G++++ + A L+Q K++LAYSSV +G + + LG GP+G ++ Sbjct: 294 LFWIGIITMVLGALMALLQTSAKKMLAYSSVSQVGFIIMGLGAAVYLGTDGPIGFAGGIM 353 Query: 343 HILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNI 402 H++NH+L K LF G + ++ D++ V GM K MPF + F AL +AG+P FN Sbjct: 354 HVINHALFKACLFLIVGAIFIRTHLLDIDRVRGMFKQMPFMGIAFIIAALGIAGVPLFNG 413 Query: 403 FLSEFMTITAGLARNHLLIIV-------LLLLLLTLVLAGLVRMAARVLMAKPPQA 451 + S+ + A ++L + + L ++ +++ + + K PQ Sbjct: 414 YASKTILHHALSEVSYLTPGTAMFIADKIFVFTSALTVSYFIKLFRGLFLGKLPQE 469 >UniRef50_D0LZ05 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=cellular organisms RepID=D0LZ05_HALO1 Length = 801 Score = 331 bits (849), Expect = 5e-89, Method: Composition-based stats. Identities = 108/424 (25%), Positives = 186/424 (43%), Gaps = 30/424 (7%) Query: 68 LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 L +D L + L ++ IG L IYSIGYM HE + Y+G+ +LF +ML Sbjct: 103 LAFRVDTLSSVMLLVITFIGSLIHIYSIGYMEHEPRYAA--------YFGYLNLFTGSML 154 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVAFGLFGTVLV 186 ++V ++L VM+ E L S L+G + ++ +A K ++ VG L G L+ Sbjct: 155 ILVLGDSLPVMFIGWEGVGLCSYLLIGFWFNETANADAGRKAFVVNRVGDFSFLIGMFLL 214 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 + + + + + + + A +FL IG K+ P++ WLPDA Sbjct: 215 FQMVGGLDYEVLRSDTAMSIYDNAFWGGERIAFWAGLFLFIGACGKSAQIPLYVWLPDAM 274 Query: 247 SEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFIL 305 + P+PVSAL+ A ++ + ++ R + S ++ G L+ AAF Sbjct: 275 A-GPTPVSALIHAATMVTAGVYMVARLSFLY---ASSTTAMIIVSTVGALTALAAAFMAF 330 Query: 306 VQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY 365 Q D K++LAYS+V +G + V +G+G A + H++ H+ K LF +G+V+ Sbjct: 331 AQTDFKKVLAYSTVSQLGFMFVGVGVG---AYVAGVFHLITHAFFKAGLFLSAGSVMHAM 387 Query: 366 -GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH------ 418 G+ D+ + G+ K MP T F LA+ G+ PF F S+ + Sbjct: 388 SGSGDIMKMGGLRKYMPRTHGAFVVYWLAICGIVPFAGFFSKDEILAGAFFTTPQGWPPG 447 Query: 419 --LLIIVLLLLLLTLVLAGLVRMAARVLMAK----PPQAVNRGDLGWLTTSPMVILLVMM 472 + +L L + R+ V + + + T P+++L V Sbjct: 448 YNYFLWAVLTLAALGTAFYMSRLYFLVFSGECRADEETKAHIHESPPSMTWPLILLAVGT 507 Query: 473 LAMG 476 +G Sbjct: 508 ALVG 511 >UniRef50_A9EX64 NADH dehydrogenase (Ubiquinone) n=3 Tax=cellular organisms RepID=A9EX64_SORC5 Length = 854 Score = 331 bits (849), Expect = 5e-89, Method: Composition-based stats. Identities = 100/515 (19%), Positives = 198/515 (38%), Gaps = 94/515 (18%) Query: 54 VQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 G+ + +DGL G + ++ +GFL +YS YMR + + Sbjct: 79 FSITGRMGQSIPIDVAFSVDGLSGTMILVITGVGFLIHLYSSAYMREDPGY--------Y 130 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAWKYIIIC 172 ++ + +LF+F+ML+++ +NL V++ E + S L+G + + A K ++ Sbjct: 131 RFFAYLNLFIFSMLVLIMGDNLAVLFVGWEGVGMCSYLLIGFWFKDDKNASAGKKAFVVN 190 Query: 173 TVGVAFGLFGTVLVYANAASVMPQ----------------------AEMAIFWSEVLKQS 210 +G L ++ ++ A+ + L S Sbjct: 191 RIGDFGLLVAMAMLAYYTGTLNFDGIAANAGNLLAAVKIWPIGNMSADTVPGFLSFLIPS 250 Query: 211 SLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVL 269 + LA + L +G K+ P++ WLPDA + P+PVSAL+ A ++ + ++ Sbjct: 251 QPVLVYAGTLAALALFLGCAGKSAQIPLYVWLPDAMA-GPTPVSALIHAATMVTAGVYLV 309 Query: 270 IRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVEL 329 R + + S F ++ + G+ + AA L Q D+K++LAYS+V +G + + + Sbjct: 310 ARLSAVF---VLSPFAMAVVAVTGVATALFAASIGLFQNDLKKVLAYSTVSQLGFMFIGV 366 Query: 330 GIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG--------TRDLNVVCGMLKIMP 381 G+G A H+L H+ K LF G+G+V+ ++D+ + G+ MP Sbjct: 367 GVG---AFAAGFFHVLTHAFFKACLFLGAGSVIHAMHARIHDTDQSQDMRNMGGLKNHMP 423 Query: 382 FTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN------------------HLLIIV 423 T F L++AG P F F S+ + + I Sbjct: 424 LTRWTFLLACLSIAGFPGFAGFWSKDEILWRAFSSRIESVSTRGQPVWQWPEWLGPAIYW 483 Query: 424 LLLLLLTLVLAGLVRMAARVLMAKPP-----------------------------QAVNR 454 + +L T+ + R + + + Sbjct: 484 VGILAATMTAFYMFRAYFQTFHGEFRGWTIVRGWKDPHPHGHHDDHHGHAHGEKLEGPEP 543 Query: 455 GDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAG 489 + T P+++L + + G + +P++ + Sbjct: 544 HESPLPMTIPLIVLGALSVFAGFLMAEPLVHLTHN 578 >UniRef50_Q1AVJ0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ0_RUBXD Length = 656 Score = 331 bits (849), Expect = 5e-89, Method: Composition-based stats. Identities = 120/486 (24%), Positives = 216/486 (44%), Gaps = 34/486 (6%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA------- 57 V+ A+ ++ ++F +L R R +A + V++ Sbjct: 9 VIAAIPVIPLVVFFVLALFGRLLRENAQYVAIFGMVFSVVFSFFALYLVIRDGRPLEFSV 68 Query: 58 --ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 + GE + ++ID L + L ++ + + +YS G+M + Y Sbjct: 69 YWINLGEGGGFPIGVYIDELAAVMLVVVSFVSLMIQLYSGGFMAGD--------RRFAWY 120 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTV 174 Y +LF +ML +V + N I ++ E L S L+G + ++ + AA K I+ + Sbjct: 121 YAVLNLFTASMLGLVVAPNFIELYICWELVGLCSYLLIGHWFEKPAARDAALKAFIVTRI 180 Query: 175 GVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 G A G ++ + + A Q+ + +L+ A V + +G K+ Sbjct: 181 GDAALFVGIIMFWRATGTT------AFEGIAEAAQAGFIGGSLLTAAVVLVFVGAIGKSA 234 Query: 235 LFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFG 293 FP+H WLPDA E P+PVSAL+ A ++ + ++ R Y I Q S ++ G Sbjct: 235 QFPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYLVARTYDIFVQ---SPTAMLIVAYIG 290 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 + +AA LV++DIKR++AYS+V +G + + LG+G A + H+ NH+ K L Sbjct: 291 AFTAFMAATMALVKKDIKRVIAYSTVSQLGYMMLGLGVG---AFSAGMFHLYNHAFFKAL 347 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 LF +G+++ + +L + G+ + MP T L+LAG+ P F S+ I + Sbjct: 348 LFLCAGSIIHAMDSYNLFEMGGLRRRMPLTFWTMVIAGLSLAGIFPLAGFWSKDAIIASA 407 Query: 414 LARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP--PQAVNRGDLGWLTTSPMVILLVM 471 ++ ++ L + + L + R +P A + + T PMVIL V+ Sbjct: 408 FEEHYYVLYALAIGTVFLTAFYIFRAIFLAFTGEPRTEGAARAVESPGVMTVPMVILAVL 467 Query: 472 MLAMGT 477 +A G Sbjct: 468 SVASGW 473 >UniRef50_A1ALQ0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALQ0_PELPD Length = 639 Score = 331 bits (849), Expect = 5e-89, Method: Composition-based stats. Identities = 125/485 (25%), Positives = 220/485 (45%), Gaps = 41/485 (8%) Query: 21 CFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF---------AAGLWLH 71 F R R + L +L + L+L +V T E + + Sbjct: 20 LFGNRLPRWVVSTIACGLPALSFLVTLVLYSSLVATGQPIAETLYTWVALDPLNVDVAFY 79 Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 +D + ++ +G L +YS+GYM H+ Y+ + +LFLF ML++V Sbjct: 80 LDQASAVMCLVVTGVGTLIHLYSVGYMSHDE--------DQPRYFAYLNLFLFFMLMLVL 131 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAWKYIIICTVGVAFGLFGTVLVYANA 190 N+I+++A E L+S L+G + A K I+ VG + +L+++ + Sbjct: 132 GKNMIMLFAGWEGVGLASYLLIGFWYQDDEKSAAGMKAFIVNRVGDTGFVLAALLIFSYS 191 Query: 191 ASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAP 250 ++ Q A F ++ L + M L + LLIG K+ P+H WLPDA + P Sbjct: 192 HTLDFQGINAYF------GTAGLPVSTMNLIGILLLIGACGKSAQIPLHVWLPDAMA-GP 244 Query: 251 SPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRD 309 +PVSAL+ A ++ + +L R ++ QA G+ ++++ G L+ V A L Q + Sbjct: 245 TPVSALIHAATMVTAGVYLLSRMNGVLLQAPGA---MQVVMWGGALTAFVGATMGLTQYN 301 Query: 310 IKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK-YGTR 368 +K++LAYS++ +G + + G+G AA+ H+ +H+ K LF G+G VL +G Sbjct: 302 LKKVLAYSTMSQIGYMFMACGLGS---FSAAMFHLYSHAFFKACLFLGAGAVLHALHGEE 358 Query: 369 DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH---LLIIVLL 425 D+ + G+ K MP T V F G+LAL G+PPF F S+ + + A H + ++ Sbjct: 359 DMRKMGGLAKKMPLTFVTFLAGSLALCGVPPFAGFFSKDEILWSAFASAHGGSTALWLVG 418 Query: 426 LLLLTLVLAGLVRMAARVLMAK----PPQAVNRGDLGWLTTSPMVILLVMMLAMG-THIP 480 + + + R + + + ++IL V +A G +P Sbjct: 419 AVAAGMTSFYMFRAIIMTFFGQDNVPAKLKHGIHEPPFSMAIVLIILGVSSVAAGFIGLP 478 Query: 481 QPVIR 485 Q + Sbjct: 479 QVLAD 483 >UniRef50_Q32RH9 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=6 Tax=cellular organisms RepID=NU5C_ZYGCR Length = 702 Score = 330 bits (848), Expect = 6e-89, Method: Composition-based stats. Identities = 133/579 (22%), Positives = 240/579 (41%), Gaps = 82/579 (14%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA----- 60 + L L L+ + + + +L +T+LL + + Q +D+ Sbjct: 13 LLPCLTAVILGLGLISTKNATKSQRLGSAILSIGALLVTMLLSITVLWEQVISDSAYRQL 72 Query: 61 -GEIFAAGLWLHI----DGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 I L+L I D L + L ++ +G L IY+ GYM H+ + + Sbjct: 73 VSWIKVDNLFLEIGCLVDPLSAIMLVLVTTVGVLVMIYTHGYMSHDQGY--------VRF 124 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTV 174 + + LF +ML +V S NL+ ++A E + S LVG + R + A K I V Sbjct: 125 FAYLSLFTASMLGLVLSPNLVQVYAFWELVGMCSYLLVGFWFTRPSAAYACQKAFITNRV 184 Query: 175 GVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 G L G + +Y S+ + +++ S+ + L+ + V L +G K+ Sbjct: 185 GDFGLLLGILALYWLTGSLEFDIVASRAHQLLVENSA--NTVLLTVCCVLLFLGPIAKSA 242 Query: 235 LFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFG 293 FP+H WLPDA E P+P+SAL+ A ++ + ++ R + + ++ G Sbjct: 243 QFPLHVWLPDAM-EGPTPISALIHAATMVAAGVYLVARLLPLFQEV---PLVMDIVAWTG 298 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 ++ + A L Q+D+K+ LAYS++ +G + + LG+G A L H++ H+ +K L Sbjct: 299 GITAVLGATVALAQKDLKKGLAYSTMSQLGYMILALGVGS---YQAGLFHLITHAYSKAL 355 Query: 354 LFCGSGNVLLKYG---------TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 LF GSG+V+ ++++ + G+ MP T V F G L+L G+PPF F Sbjct: 356 LFLGSGSVIHGIEPVVGYNPNQSQNMTYMGGLRSYMPITGVTFLIGTLSLCGVPPFACFW 415 Query: 405 SEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA------------------ 446 S+ + + ++ +L L L + RM Sbjct: 416 SKDEILADAWHK-LPVLGLLAWLTAGLTAFYMFRMYFITFEGTFRGSSLISNKSSKQTLS 474 Query: 447 --------------------KPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRI 486 K + ++ + T P+++L + + +G I P+ Sbjct: 475 VNKMDSVFALSNQTKDNTSLKASKHLDPHESSNAMTIPLIVLTIPTILIG-FIGAPLPNG 533 Query: 487 LAGAST----IVLSGTHDLPAQRSTWHDFLPSGTASVSE 521 L G+S + L T + + W +F + SVS Sbjct: 534 LTGSSLLSHWLYLDNTEIVELSTNGWTEFAITALPSVSI 572 >UniRef50_C1F220 NADH dehydrogenase I, L subunit n=2 Tax=Bacteria RepID=C1F220_ACIC5 Length = 687 Score = 330 bits (848), Expect = 6e-89, Method: Composition-based stats. Identities = 128/509 (25%), Positives = 226/509 (44%), Gaps = 50/509 (9%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWV-----VQTAADA 60 + L+ P+L + L ++R + + LL ++AL V+ + Sbjct: 4 LLWLIPALPMLAAALIALMPRQRRVPAAALAIGSLGISLLLSLVALVQTIANPVRQVYNF 63 Query: 61 GEIFAAGLWLHI----DGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 + W+ + D L + L ++ +G L IYS+GYM H+ ++ Sbjct: 64 NWLQFGSQWVQLGWILDPLCAVMLVMVTFVGLLIFIYSLGYMAHDE--------NFTRFF 115 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVG 175 F LF ML VV +N+L++++ E L+S L+G + + S AA K I +G Sbjct: 116 CFLALFAGAMLGVVLANSLLLLFMCWEIVGLTSYLLIGFWFHKPSAAAAAKKAFITTRIG 175 Query: 176 VAFGLFGTVLVYANAASVMPQAEMA-----IFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 L G V +YA++ +++ A + ++ Q++L + + L G Sbjct: 176 DLGLLLGMVWLYASSGTLLFYNNGAGCLEHSALAAMVTQTTLAGMAVSTAIALLLFCGAA 235 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGS---DFPN 286 K+G P+H WLPDA E P+PVSAL+ A ++ + ++ R Y ++ A Sbjct: 236 GKSGQVPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYLIARVYPLMAAAATPHTISAAL 294 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 +++ G ++ AA + Q DIKR+LAYS+V +G + + LG+G G+ + H++ Sbjct: 295 QVVAWVGAITAFFAACIAVAQNDIKRILAYSTVSQLGYMMLGLGVG---GVAIGMFHLIT 351 Query: 347 HSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 H+ K LLF G+G+V+ +D+ + G+ + MP T V + G LAL G P F F S Sbjct: 352 HAFFKALLFLGAGSVIHGCTEEQDIRNMGGLRRFMPITFVTYMCGMLALCGFPLFAGFWS 411 Query: 406 EFMTITAGLARN-HLLIIVLLLLLLTLVLAGLVRMAARVLMA--------------KPPQ 450 + + A L L L + R V +PP+ Sbjct: 412 KDEILHAAHGWPISLGPFYLGAAGALLTAFYMTRQVCYVFFGPRRLPEATADLSSPRPPE 471 Query: 451 A---VNRGDLGWLTTSPMVILLVMMLAMG 476 A + + + T P+++L + + +G Sbjct: 472 ACVIRDPHESPAVMTVPLIVLALFAVLLG 500 >UniRef50_A7ZBL2 Hydrogenase-4 component F n=6 Tax=Epsilonproteobacteria RepID=A7ZBL2_CAMC1 Length = 493 Score = 330 bits (847), Expect = 7e-89, Method: Composition-based stats. Identities = 172/475 (36%), Positives = 268/475 (56%), Gaps = 4/475 (0%) Query: 23 ACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAI 82 + + + VL S ++ L L V G ++ +L +D LG +FL + Sbjct: 19 FLSPKNYAVLSGLHVLFSAATSVAL---LNNVLKVLSGGTFYSFDKFLFLDSLGCVFLVL 75 Query: 83 LGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAI 142 + V GF+ YSI YMR E+ G + L YY H+F+FTM L V NN+ MWAAI Sbjct: 76 IAVTGFIVNFYSIHYMRWELEDGHIHLSDLKKYYALSHVFIFTMTLSVICNNVAFMWAAI 135 Query: 143 EATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIF 202 EATTL+S FLV I+ + S E+ +KYI++C++G+AF L+ TVL+Y+ S + E ++ Sbjct: 136 EATTLASVFLVAIHKDQKSTESGYKYIVLCSIGLAFALYATVLLYSATYSTLGDGEASMQ 195 Query: 203 WSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLL 262 +S ++ + L+P L FVF LIGFGTK GL P H WLPD H+E P+P+SALLS VLL Sbjct: 196 FSSIMANAKNLNPDAAKLIFVFALIGFGTKAGLAPTHTWLPDVHAEGPAPISALLSGVLL 255 Query: 263 NCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENM 322 CA+L L+RYY I QA+G F ++++ G +++ VA FF++ Q ++KR+ AY S+ +M Sbjct: 256 KCAMLALLRYYAITAQAVGFSFVEGVMIVSGTITLFVAGFFLIRQHNVKRMFAYHSIVHM 315 Query: 323 GLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPF 382 G++A LG+GG G+FAA+ H L HS K L FC +GN+ YG +D++ + GM+KI P Sbjct: 316 GVIAFALGVGGKFGLFAAIFHCLAHSFTKALAFCSTGNIARIYGHKDMSKMGGMVKIAPI 375 Query: 383 TAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAAR 442 T ++FG +L G+P F IF+SE+ + + + L + L ++ Sbjct: 376 TTIMFGAAVCSLVGVPAFAIFVSEYNVFVGAITSGQYIAVALFAIALAVIFIADFAHFNM 435 Query: 443 VLMAKPPQ-AVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLS 496 +P V+ ++ P++ L +++ G ++ I++ Sbjct: 436 ASFGEPKGVVVHNKEMSLFENLPLIALCALIIIFGVWHVDSFYTLVNNGVNIMMG 490 >UniRef50_C4V3R7 NADH dehydrogenase (Quinone) n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V3R7_9FIRM Length = 634 Score = 329 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 117/492 (23%), Positives = 213/492 (43%), Gaps = 35/492 (7%) Query: 2 SYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG 61 + + + + L L F ++ R+ + + V+ +L + +AL V G Sbjct: 5 ALTHAYLIPLFPALAFLIIAPFTRREKNLSATIAIVMMALAFAFSVFVALAAVNYQITMG 64 Query: 62 EIF------------AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSP 109 + + + + ID L L L I+ ++ L IYS+ YM H+ G Sbjct: 65 DPYVMKTVWAHIGAVELSMGVLIDPLTALMLVIVTLVSLLVYIYSVSYMEHDEGMG---- 120 Query: 110 VTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKY 168 ++ F LF ML +V S N + ++ E L S L+G Y + S+ EAA K Sbjct: 121 ----RFFAFISLFSAAMLGLVVSVNFLQLYVFWEGVGLCSYLLIGFYYDKVSAREAAKKA 176 Query: 169 IIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIG 228 I +G L G +LV + ++ + + VL + + + + L +G Sbjct: 177 FITTRIGDFGMLVGILLVQVSFGTMDFIELRLMMPAYVLVAGT----GYLTVIGLLLFMG 232 Query: 229 FGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNR 287 K+G FP+H WL DA E P+P SAL+ A ++ + ++ R + I + Sbjct: 233 PIGKSGQFPLHVWLLDAM-EGPTPTSALIHAATMVAAGVFLVARAFFIFSEC---PLVMN 288 Query: 288 LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNH 347 + G + AA + QR K +LAYS++ +G + + +GIG A++ H++ H Sbjct: 289 FIAGLGAFTALFAAVIAVTQRRFKAVLAYSTISQLGYMMLAVGIG---AFSASMFHLMTH 345 Query: 348 SLAKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 + K +LF +G V+ D+ + G+ K MP T V G LA++G+PPF+ F S+ Sbjct: 346 AFFKAMLFLCAGAVMHALHDETDITKMGGLWKKMPLTFVTMLIGVLAISGIPPFSGFFSK 405 Query: 407 FMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMV 466 + A + + L ++ L + R+ + + ++ PM+ Sbjct: 406 DEILAAAMHASTPL-YLMATFTSFLTAFYMARLLIVAFLGESRSEHEAHEVDAFMRWPMI 464 Query: 467 ILLVMMLAMGTH 478 +L ++ + G Sbjct: 465 MLALLTIVSGLW 476 >UniRef50_B4UA28 NADH dehydrogenase (Quinone) n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA28_HYDS0 Length = 480 Score = 329 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 164/450 (36%), Positives = 282/450 (62%), Gaps = 7/450 (1%) Query: 45 LLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAH 104 + +++ L++ ++ G + G + +D L + + I+ V+GFLT +YSIGY+ E + Sbjct: 34 INVVVFLYLFKSLKTNGPYY--GTYFTLDSLNIVLIGIVSVVGFLTYLYSIGYLEKEKS- 90 Query: 105 GELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEA 164 L + ++Y + + F+F+MLL+V+++NL +MW +IEATTLS+ FL+ Y ++++EA Sbjct: 91 --LKESKIKEFYLWINTFMFSMLLLVSTSNLGIMWVSIEATTLSTTFLISFYKNKTAVEA 148 Query: 165 AWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVF 224 +WKYI++C++G+A LFG +L+Y +++ ++ W ++ + +D L+ +AFVF Sbjct: 149 SWKYIMLCSLGIALALFGIILIYFGVINIIGGGLYSLDWQNIMPIADKIDKNLLKIAFVF 208 Query: 225 LLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDF 284 +L+GFGTK GL P+H WLPDAHSEAP+P+SAL+S+VLL+C+ +IR + I +A F Sbjct: 209 VLVGFGTKMGLAPLHFWLPDAHSEAPTPISALMSSVLLSCSFYTIIRIFSIESKAGIGAF 268 Query: 285 PNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHI 344 +L G+ S+ +A+ FI RD KRLLAYS++E+MG++A LG+G GIFA+LL + Sbjct: 269 TYDTMLYIGLFSIVLASIFIPRSRDYKRLLAYSTMEHMGILAFSLGLGSFEGIFASLLGL 328 Query: 345 LNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 + H+L K L+F SG++L+ T+ + + G+ KI+P TA G A+ G PPF +F+ Sbjct: 329 IAHALTKALMFMSSGSILVNLHTKSIKDIKGLFKILPITATFLAVGVFAITGAPPFLLFI 388 Query: 405 SEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSP 464 SEF+T+ + + +++LL L+L+ G + +L +P + + P Sbjct: 389 SEFLTLISAFKEGFIWQGIVVLLALSLIFFGFIESFFGMLTREPTFEQKKEHM--FMLIP 446 Query: 465 MVILLVMMLAMGTHIPQPVIRILAGASTIV 494 M IL+++++ +G IP + +L A + Sbjct: 447 MGILVILIVGLGLFIPNDIKSLLENAVYTI 476 >UniRef50_C0JX69 Subunit 5 of NADH-plastoquinone oxidoreductase n=1 Tax=Pyramimonas parkeae RepID=C0JX69_9CHLO Length = 642 Score = 329 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 127/495 (25%), Positives = 219/495 (44%), Gaps = 41/495 (8%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG---- 61 +F L T + L+ F + L + LGI+++ LA++ Q + Sbjct: 14 VFPLFSATVMGLGLISFQKATQSLRRDLAFFTIFLLGISVIFSLAIFFFQYNGNGSYQWE 73 Query: 62 ------EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 + F+ + ID L L ++ + FL IY+ GYM ++ + + Sbjct: 74 MEWVVSQNFSLEMGYLIDPLSSTMLVVVSTVAFLVMIYTDGYMNYDQGY--------VRF 125 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTV 174 + + LF +ML +V S NL+ ++ E L S L+G + R ++ +A K I + Sbjct: 126 FSYLSLFTASMLGLVLSTNLVQVYIFWELIGLCSYLLIGFWFTRTTAGDACQKAFITNRM 185 Query: 175 GVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 G L G + Y S E+A +L+ L P L L + L +G +K+ Sbjct: 186 GDFGLLLGILGFYWLTKSF-HFNEIAFRLESLLQVDPKLIP-LGTLFAILLFLGPISKSA 243 Query: 235 LFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFG 293 FP+H WLPDA E P+P+SAL+ A L+ + ++ R + I Q + G Sbjct: 244 QFPLHVWLPDAM-EGPTPISALIHAATLVAAGVFLVGRMFPIFDQ---FPIVMSTIAWTG 299 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 L+ + A Q D+K+ LAYS+V +G + + +G+G A L H++ H+ +K L Sbjct: 300 CLTAFLGATIATTQVDLKKGLAYSTVSQLGYMMMAMGVGS---YSAGLFHLITHAYSKAL 356 Query: 354 LFCGSGNVLLKYG---------TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 LF GSG+ + +++N + G+ K MP TA+ F G L++ G PPF F Sbjct: 357 LFLGSGSAIHGMEGAVGFSPYINQNMNQMGGLRKKMPITAITFLIGTLSICGFPPFACFW 416 Query: 405 SEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA--KPPQAVNRGDLGWLTT 462 S+ ++ N +L + L L + R+ + P + G + Sbjct: 417 SKDAILSDLFQANPILW-LFAWLTAGLTSFYMFRIYFLTFEGTFRGPNISLVKESGPMML 475 Query: 463 SPMVILLVMMLAMGT 477 P+++L + L +G Sbjct: 476 FPLIVLTIPTLILGL 490 >UniRef50_Q8R9B0 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit n=2 Tax=Thermoanaerobacteraceae RepID=Q8R9B0_THETN Length = 673 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 138/537 (25%), Positives = 238/537 (44%), Gaps = 46/537 (8%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA--- 57 M+ +F L + ++ +L+ + A L + A+ V+ Sbjct: 2 MTVQQLFLLSIFLYVVGALISLGLNRDGKIANYVSGTTAFLAGCTGVASAVPVLIEGKGF 61 Query: 58 -ADAGEIFAAG-LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 + E G +++D L ++ ++ TG+YSI Y + G L Sbjct: 62 ILEGMEFIPFGRFTINVDPLSAFMTLVISLLSIATGVYSISYQEEYIGKGTGVMGFLN-- 119 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTV 174 ++F+ +M+LVVTS+N E TL S FLV + R +++A + Y ++ V Sbjct: 120 ----NIFIVSMILVVTSDNAFYFLVFWELMTLVSYFLVCFEQENREAIKAGFVYFVMAHV 175 Query: 175 GVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 G + +L Y + A +++ L P + LAF+ +GFG K G Sbjct: 176 GTVLIMISFILFYVYTGTFDFAA----------FRNANLSPVIKNLAFLLAFLGFGVKAG 225 Query: 235 LFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 + P H WLP AH APS VSAL+S V++ A+ +IR + A + + +L FG Sbjct: 226 IVPFHFWLPQAHPAAPSNVSALMSGVMIKTAIYGIIRVGVDFLGA-ATWWWGLTVLAFGA 284 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLH 343 +S + + + D+KRLLAYSS+EN+G++ + +G G G LGI A L H Sbjct: 285 ISAVFGVLYAVSENDLKRLLAYSSIENVGIILMGVGAGMMGIATGYVSVGILGILAGLYH 344 Query: 344 ILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 ++NH++ K LLF G+G+V+ + TR++ + G+ + MP+T + F GAL+++ +PP N F Sbjct: 345 LINHAVFKGLLFLGAGSVVYRLHTRNMEEMGGLARYMPWTGLTFFIGALSISALPPLNGF 404 Query: 404 LSEFMTITAGLARN----------HLLIIVLLLLLLTLVLAGLVRMAARVLMA--KPPQA 451 +S++ T A + L V L L L V+ + Sbjct: 405 VSKWFTYHTLFAVSTKGSVLIRMAFPLAAVALALTGALTSLCFVKAYGVTFTGPFRGGNE 464 Query: 452 VNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTW 508 + ++ M +L + +G P I AS ++ + + S + Sbjct: 465 LKIKEVPVTMLIGMGLLAIGCFVLGLGAPVGAGYIANVASALLHVSSPKVSDGLSIF 521 >UniRef50_Q1IS53 Proton-translocating NADH-quinone oxidoreductase, chain M n=16 Tax=Bacteria RepID=Q1IS53_ACIBL Length = 559 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 128/512 (25%), Positives = 229/512 (44%), Gaps = 32/512 (6%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSL-GITLLLILALWVVQTAAD 59 M S + +++L TPL ++L K +A R + L +L G + L L W ++ Sbjct: 1 MFRSHILSIVLFTPLAGAILLLMVPKENKNAIRWIANLAALAGFLVSLPLIPWFWAVKSE 60 Query: 60 AGEIF--------------AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHG 105 F AG L IDG+ L + + ++G ++ + S Sbjct: 61 VTPYFKFAEGSTNNWIPSIGAGYQLGIDGISFLLIILTTLLGSISILSSW---------- 110 Query: 106 ELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAA 165 + +YY +F L ML V +N+ + + EA + L+GI+G L AA Sbjct: 111 TAIENRVKEYYAWFLLLQTGMLGVFMANDFFLFFVFWEAMLVPMYLLIGIWGGPRKLYAA 170 Query: 166 WKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFL 225 K+ + G L G + +Y + +V ++ + + L+ + F Sbjct: 171 IKFFLYTLAGSVLMLLGILFLYFHHHTVTGVYTFSL--EALYATAPLITGKAAIFLFFAF 228 Query: 226 LIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGS-DF 284 +GF K +FP H WLPDAH EAP+ S +L+ VLL LIR+ + A+ + + Sbjct: 229 FVGFAIKVPMFPFHTWLPDAHVEAPTAGSVILAGVLLKMGTYGLIRFSLPFFPAVATIKW 288 Query: 285 PNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHI 344 LL+ ++ + A LVQ+D+K+L+AYSSV ++G + + + +GI +++ Sbjct: 289 VQALLITLSLIGILYGALVSLVQKDMKKLVAYSSVSHLGFCTLGIFVFTQMGIAGSVIQQ 348 Query: 345 LNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 +NH ++ LF G + + TR+++ G+ +MP A + ++ G+P N F+ Sbjct: 349 INHGISTGALFLIVGILYERRHTREISEYGGISTVMPVYATIALIMFMSSMGLPLLNGFV 408 Query: 405 SEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA--KPPQAVNRGDLGWLTT 462 E + A N + + + L A L+ + RV P+ DL Sbjct: 409 GEMPIMMATFMVNKTW-AIWAIPGVVLAAAYLLWLYQRVFFGTVTNPKNEKLADLTPREL 467 Query: 463 SPMVILLVMMLAMGTHIPQPVIRILAGASTIV 494 + V L+++ LA+G + PQP+ +IL + + Sbjct: 468 ATFVPLVILALAIGLY-PQPLFKILDQPAAKL 498 >UniRef50_D2BHY2 NADH:quinone oxidoreductase subunit 5 (Chain L) n=5 Tax=Dehalococcoides RepID=D2BHY2_DEHSV Length = 654 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 126/488 (25%), Positives = 219/488 (44%), Gaps = 39/488 (7%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWV---------VQTA 57 L++L PL+ L L G+ L+L++W V Sbjct: 6 LWLIMLLPLICGALIAMGYAFFCKKPALSGYLGIAGVGGSLLLSIWGLTGLLGKEGVSHY 65 Query: 58 ADAGEIFAAG------LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 A F+ G L L+ D L G+ ++ + + IYS GYM + + Sbjct: 66 ASGFSWFSIGNSVDISLNLNFDPLAGIMCFVILFVSLMVHIYSQGYMHGDKGY------- 118 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKY-II 170 YY F F +ML +V S+NL+ + E L+S L+G + R + A K I Sbjct: 119 -PRYYAFLSFFTASMLGLVLSDNLLFTFFFWELVGLASYLLIGFWFTRPAAANAAKKAFI 177 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 + +G L ++++AN ++ + + + + + +A + + G Sbjct: 178 VTRIGDVGFLAAILILFANTGTLDINSLNG------MAEMGFIGAGTVTVAALGIFAGAV 231 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ FP+H WLPDA E P+PVSAL+ A ++ + ++ R Y I + + + Sbjct: 232 GKSAQFPLHVWLPDAM-EGPTPVSALIHAATMVAAGVFLVARTYPIFESSATAMLW---V 287 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 I G ++ AA LV D+KR+LAYS+V +G + + LG G GI + H+ NH+ Sbjct: 288 SIIGAVTAIFAATMALVMNDMKRILAYSTVSQLGYMMLGLGTG---GIAIGIFHLFNHAF 344 Query: 350 AKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 K+LLF GSG+V GT D+ + G+ K MP T+ F +L+LAG+ P + F S+ Sbjct: 345 FKSLLFLGSGSVNHATGTFDIREMGGLSKPMPVTSKTFLIASLSLAGIWPLSGFFSKDEI 404 Query: 410 ITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILL 469 + + +++ +L L+ + L + R+ + + + + P++IL+ Sbjct: 405 LAGAMD-GQVILFILALITVFLTAFYMFRLYFVAFGGTYRGKGHPHESPKVMSWPLLILV 463 Query: 470 VMMLAMGT 477 V + G Sbjct: 464 VPSVISGL 471 >UniRef50_D2QSX4 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Bacteroidetes RepID=D2QSX4_9SPHI Length = 642 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 121/498 (24%), Positives = 219/498 (43%), Gaps = 46/498 (9%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQ----- 55 M ++ AL+ L PL+ L+ +R ++ + L L+ Sbjct: 1 MKIELLCALIPLFPLIGFLINGLGFRRVPKGLAGAISTVAVLASFLTSAYLFGAFLGNAN 60 Query: 56 -TAADAGEIFAAGLW-----------LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVA 103 +A +I W ID L L L ++ +G L +YSIGYM H+ Sbjct: 61 LSANAGPQIATLFDWISVGDLHINFSFQIDQLSLLMLLVVTGVGSLIHLYSIGYMSHDEG 120 Query: 104 HGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE 163 G+ + F +LF+F MLL+V +N ++M+ E L S L+G + + S Sbjct: 121 FGK--------FMAFLNLFIFFMLLLVMGSNYVIMFIGWEGVGLCSYLLIGFWNKNISYN 172 Query: 164 -AAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAF 222 AA K ++ +G L G ++ +V S + ++L Sbjct: 173 NAARKAFVMNRIGDLGFLLGIFMLINTFGTVEYVDIFKQATSLAVGDKTIL------AIT 226 Query: 223 VFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIG 281 + L +G K+ P++ WLPDA + P+PVSAL+ A ++ + +++R ++ A Sbjct: 227 LLLFVGAMGKSAQVPLYTWLPDAMA-GPTPVSALIHAATMVTAGIYMVVRSNVLYTLA-- 283 Query: 282 SDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAAL 341 ++ +++ +AA L+Q DIK++LAYS+V +G + + L A + Sbjct: 284 -PLTLEIIGGIAIVTALLAASIGLLQNDIKKVLAYSTVSQLGYMFLGL---SATAYTAGM 339 Query: 342 LHILNHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 H++ H+ K LLF G+G+V+ +D+ + G+ K +P T + F G +A++G+PPF Sbjct: 340 FHVITHAFFKALLFLGAGSVIHAMSDEQDIRKMGGLRKALPVTFITFLIGTIAISGLPPF 399 Query: 401 NIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK----PPQAVNRGD 456 F S+ + N LL L +L L + R+ + Q + + Sbjct: 400 AGFFSKDEILAHVFEHNKLLW-GLGVLGSGLTSFYMFRLLFLTFFGEFRGTEEQRHHLHE 458 Query: 457 LGWLTTSPMVILLVMMLA 474 T+P+V+L ++ + Sbjct: 459 SPATMTAPLVVLAILSII 476 >UniRef50_C6VXR9 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Bacteria RepID=C6VXR9_DYAFD Length = 639 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 133/531 (25%), Positives = 232/531 (43%), Gaps = 51/531 (9%) Query: 15 LLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAA-------- 66 L+ + K + T+ V+ S ++++ A + +F Sbjct: 18 LINGIGFPNIPKGAVGIIGTLAVVASFVLSVMTFNAFVAAGSQPFVLPLFDWITVGDLHI 77 Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 ID L L L I+ +G L IYSIGYM H+ G+ ++ + +LFLF M Sbjct: 78 PFSFQIDQLSLLMLMIITGVGSLIHIYSIGYMHHDSGFGK--------FFAYLNLFLFFM 129 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVGVAFGLFGTVL 185 LL+V +N ++M+ E L S L+G + + ++ AA K I+ VG L G Sbjct: 130 LLLVLGSNYVIMFIGWEGVGLCSYLLIGFWNKNTNYNNAARKAFIMNRVGDLGFLLGIFT 189 Query: 186 VYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDA 245 + A SV + + +++ +FL +G K+ P++ WLPDA Sbjct: 190 IIATFGSVEYTEVFSK-----AAAGFQVGDPVIITITLFLFVGAMGKSAQIPLYTWLPDA 244 Query: 246 HSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFI 304 + P+PVSAL+ A ++ + ++IR ++ A + ++ I G + AA Sbjct: 245 MA-GPTPVSALIHAATMVTAGIYMVIRSNVLYSLAPST---LEIVGIIGGATALFAASIG 300 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK 364 L+Q DIK++LAYS+V +G + + LG + A++ H++ H+ K LLF G+G+V+ Sbjct: 301 LLQNDIKKVLAYSTVSQLGYMFMGLG---AMAYSASMFHVITHAFFKALLFLGAGSVIHA 357 Query: 365 Y-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIV 423 +D+ + G+ K +P T + F +A++G+PPF F S+ + N +L V Sbjct: 358 MSDEQDIRSMGGLRKKLPVTFLTFLIATIAISGIPPFAGFFSKDEILAHVFEHNKILW-V 416 Query: 424 LLLLLLTLVLAGLVRMAARVLM----AKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHI 479 + +L + + R+ Q + + T P++IL ++ A G Sbjct: 417 IGVLGSVMTSFYMFRLLFLTFFGTFRGTHEQEHHLHESPASMTVPLIILAILSAAGGFI- 475 Query: 480 PQPVIRILAGASTIVLSGTHDLPAQRSTWHDFL----PSGTASVSEKHSER 526 L G+H L + +D P+ A S HSE Sbjct: 476 ----------GVPEALHGSHQLAQFMAPLYDLAKTANPAAFAHTSLSHSEE 516 >UniRef50_Q1RKE6 NADH-quinone oxidoreductase subunit L n=15 Tax=Rickettsia RepID=NUOL_RICBR Length = 642 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 105/490 (21%), Positives = 211/490 (43%), Gaps = 35/490 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWV-------VQTAA 58 + +++L PL +L+ +R ++ L ++ L L ++ + Sbjct: 5 IAIMIILLPLASALINGLFVRRIDKKLASIVATSFLSLSALFALIIFYHTGLNGHIIHIK 64 Query: 59 DAGEI----FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 I F ++ID L + + + + IYS+GYM + + Sbjct: 65 LLPWIEVSQFKVDWSIYIDQLTSIMFIAVTWVSSVVHIYSLGYMSRDKG--------IVR 116 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICT 173 + F LF F ML++V+++N + ++ E + S L+G + + S +AA K I Sbjct: 117 FLSFLSLFTFFMLMLVSADNFLQLFFGWEGVGICSYLLIGFWYSKESANKAAIKAFIANR 176 Query: 174 VGVAFGLFGTV--LVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 VG + G + + Y ++A+ +A + + + +++ +A + L IG Sbjct: 177 VGDFAFILGVITIIFYCHSANYEDVFLLAPKLANTKILLADFEISILDIACLLLFIGCMG 236 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ +H WLPDA E P+PVSAL+ A ++ + ++ R + S + + Sbjct: 237 KSAQIGLHVWLPDAM-EGPTPVSALIHAATMVTAGVFLVARCSYLFEY---SPMVLQFIT 292 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 I G ++ AA ++Q DIK+++AYS+ +G + + G+ + + H++ H+ Sbjct: 293 IIGGITCLFAASIAIMQNDIKKIIAYSTCSQLGYMFMACGVS---AYNSGIFHLVTHAFF 349 Query: 351 KTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 K LLF +G+V+ +D+ + + MP T F G+LAL G+ P F S+ + Sbjct: 350 KALLFLSAGSVIHAVHEQDIFKMGELRNKMPITYGNFLIGSLALIGIYPLAGFYSKDSIL 409 Query: 411 TAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA----VNRGDLGWLTTSPMV 466 A + + + +L L +++ V K + + + +P+ Sbjct: 410 EAAYSSGS-FMFIFGILAAILTAIYSMKIIMLVFHGKTRLEKDVFEHAHEPPKVMNNPLT 468 Query: 467 ILLVMMLAMG 476 +L+ G Sbjct: 469 LLVAGSFFSG 478 >UniRef50_D0D447 NADH-quinone oxidoreductase subunit l n=65 Tax=cellular organisms RepID=D0D447_9RHOB Length = 762 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 116/501 (23%), Positives = 204/501 (40%), Gaps = 38/501 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI-- 63 M ++L PL+ ++L + + L + + L +L+ V T ++ + Sbjct: 1 MVTIILFAPLVGAIL--GGFGWKFMGEKGAMWLTTGLLFLAALLSWIVFLTLGESHTVTL 58 Query: 64 --------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 + + ID L + L ++ + L +YS GYM H+ + Sbjct: 59 FRFIESGTLSTDWAIRIDRLTAIMLIVVTTVSALVHLYSFGYMAHDPQFEHTP--YRARF 116 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTV 174 + + LF F ML +VTS+NL+ M+ E L+S L+G Y ++ S AA K ++ V Sbjct: 117 FAYLSLFTFAMLALVTSDNLVQMFFGWEGVGLASYLLIGFYYKKPSAGAAAIKAFVVNRV 176 Query: 175 GVAFGLFGTVLVYANAASVMPQAEMAIF--WSEVLKQSSLLDPTLMLLAFVFLLIGFGTK 232 G G +Y S+ A +E + L L +G K Sbjct: 177 GDFGFALGIFALYYLTDSIQFDQIFAEIPRLAETQLHFLWTEWNAANLIAFLLFVGAMGK 236 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLI 291 + +H WLPDA E P+PVSAL+ A ++ + ++ R ++ A + + Sbjct: 237 SAQLFLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLVCRMSPLMEYAPQA---TAFITF 292 Query: 292 FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAK 351 G + VAA LVQ DIKR++AYS++ +G + V G+G A+ H+L H+ K Sbjct: 293 LGATTAFVAATIGLVQNDIKRVIAYSTMSQLGYMFVAAGVGV---YSVAMFHLLTHAFFK 349 Query: 352 TLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGM-------PPFNIF 403 +LF G+G+V+ + +D+ + +P T G LA+ G+ F F Sbjct: 350 AMLFLGAGSVIHAMHHEQDMRNYGALRTKIPMTFWAMMIGTLAITGVGIPLTGWFGFAGF 409 Query: 404 LSEFMTITAGLARNH-LLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLG 458 +S+ I + A +L++ R+ K + + Sbjct: 410 VSKDAIIESAWAGTQGGYAFWMLVIAALFTSFYSWRLMFMTFYGKARGDKHTHEHAHESP 469 Query: 459 WLTTSPMVILLVMMLAMGTHI 479 + P+ +L V + G Sbjct: 470 RVMLIPLGVLAVGAVFSGMVF 490 >UniRef50_Q3AH00 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=Chroococcales RepID=Q3AH00_SYNSC Length = 669 Score = 327 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 130/568 (22%), Positives = 240/568 (42%), Gaps = 74/568 (13%) Query: 6 MFALLLLTPLLFS------LLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQT--- 56 + L+ + PL + L+ F RL + ++ +G L ++ Q Sbjct: 7 LAWLIPVLPLFGAVLTGLGLISFNRTINRLRKPVALLLISCVGAAAALSYSILFNQLNGA 66 Query: 57 -------AADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSP 109 + F + +D LG + LA++ I L +YS GYM H+ + Sbjct: 67 PPVEHLFVWASAGSFILPMGYVVDPLGAVMLALVTTIALLVLVYSHGYMAHDKGY----- 121 Query: 110 VTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKY 168 ++ + LF +ML ++ S NL+ ++ E + S LVG + R + AA K Sbjct: 122 ---VRFFTYLALFSSSMLGLIISPNLLEIYVFWELVGMCSYLLVGFWYDRDGAAHAAQKA 178 Query: 169 IIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIG 228 ++ VG L G + ++ S Q + + + + P LL + + +G Sbjct: 179 FVVNRVGDFGLLLGILGLFWATGSFDFQGIADGLQNGL--AAGTVAPWAALLLCLLVFMG 236 Query: 229 FGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNR 287 K+ FP+H WLPDA E P+P+SAL+ A ++ + ++ R + Q Sbjct: 237 PMAKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARLDPLYAQ---FPVVQT 292 Query: 288 LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNH 347 ++ + G ++ + A L Q D+K+ LAYS+V +G + + +G G P+ A + H++ H Sbjct: 293 VIAVVGTITCFLGASIALTQMDLKKGLAYSTVSQLGYMMLAMGCGAPV---AGIFHLVTH 349 Query: 348 SLAKTLLFCGSGNVLLKYGT---------RDLNVVCGMLKIMPFTAVLFGGGALALAGMP 398 + K +LF GSG+V+ +D+ ++ G+ K MP T++ F G +A++G+P Sbjct: 350 AFFKAMLFLGSGSVIHAMEEVVGHEPVLAQDMRLMGGLRKKMPVTSITFFIGCIAISGIP 409 Query: 399 PFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK----------- 447 P F S+ + + L+ V+ L + + R+ + Sbjct: 410 PLAGFWSKDEILGQAFNS-YPLLWVVGFLTAGMTAFYMFRLYFLTFEGEFRGNDTAMQAQ 468 Query: 448 --------PPQAVNRG----DLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVL 495 P + G + W +P+ +L V + +G + P AG +L Sbjct: 469 LLSAAGKDPSEHHAHGGSVHESAWPMAAPLAVLAVPSVLIGL-LGTPWNSRFAG----LL 523 Query: 496 SGTHDLPAQRS-TWHDFLPSGTASVSEK 522 + L +W +FLP +ASV+ Sbjct: 524 NPEEALEMAEHFSWGEFLPLASASVAIS 551 >UniRef50_A5UVF8 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Chloroflexaceae RepID=A5UVF8_ROSS1 Length = 654 Score = 327 bits (839), Expect = 6e-88, Method: Composition-based stats. Identities = 132/510 (25%), Positives = 228/510 (44%), Gaps = 51/510 (10%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 + + L+ PL+ LL +R +A +V+ L I A+ V++ A + Sbjct: 1 MNWIIWLIPAFPLIGFLLNALVVRRERAAGILASVMVGLSFAAT-IAAMVVLEGAPSGAK 59 Query: 63 IFAAGLW-------------LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSP 109 LW L D L + ++ +G L IYSIGYM + Sbjct: 60 RLTWTLWEWIGIADFRVAFGLLFDPLTAVMALLITGVGGLIHIYSIGYMHGD-------- 111 Query: 110 VTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL------- 162 V ++ F +LF+F ML++V ++NL++++ E L S L+G Y R S+ Sbjct: 112 VRPVRFFAFMNLFVFAMLMLVMADNLLLLFLGWEGVGLCSFLLIGHYFDRRSVPPGINPS 171 Query: 163 EAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDP------- 215 EAA K ++ VG A L ++ N ++ + S L Q+ ++ Sbjct: 172 EAAVKAFVVNRVGDAAMLAALFAIFTNFGTLSFYDNPQLSISGYLDQAIVVAGETVDLGA 231 Query: 216 ----TLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLI 270 LM + +L+ K+ FP++ WLPDA + P+PVSAL+ A ++ + +++ Sbjct: 232 FGQLPLMTGITLLMLVAVAGKSAQFPLYTWLPDAMA-GPTPVSALIHAATMVTSGVYLIV 290 Query: 271 RYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELG 330 R + + Q + +L+ G+++ + A + Q DIKR+LAYS+V +G + +G Sbjct: 291 RNHTLFDQPASAA---PWVLVIGVMTAFIGATAAVAQLDIKRVLAYSTVSQLGYMVAAVG 347 Query: 331 IGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGG 389 +G A + H+L H L K LLF +G+V+ G +D+ + G+ +P T L+ Sbjct: 348 MG---AYVAGMYHLLTHGLFKALLFLAAGSVIHGIGDHQDMRRMGGLRNALPTTFRLYVI 404 Query: 390 GALALAGMPPFNIFLSEFMTIT-AGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP 448 GALAL+G+ P F S+ I A L ++L+L + + R V +P Sbjct: 405 GALALSGIFPLAGFWSKDEIIAHAWFDARSPLAAIMLILTSAVTAFYMGRQIGMVFFGRP 464 Query: 449 PQA-VNRGDLGWLTTSPMVILLVMMLAMGT 477 ++ + G MV L + G Sbjct: 465 RDPTIHGHESGAAMRWTMVALAGGAVVGGL 494 >UniRef50_Q12ZH4 Na+/H+ antiporter subunit n=2 Tax=Methanosarcinaceae RepID=Q12ZH4_METBU Length = 513 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 129/516 (25%), Positives = 245/516 (47%), Gaps = 29/516 (5%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAA-- 58 +S + + LL+ P+L S L R + + + V SL + L+ I+ L V Sbjct: 3 ISMTHLPILLVAVPILMSALMIFLRS-NANVQKWLNVSVSLAMMLISIILLLQVWNGGIQ 61 Query: 59 --DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 + GE G+ L D L + + ++ FL +YS+ Y+ + Y+ Sbjct: 62 VYEVGEWGKYGIVLVADLLSSGMVVLSSIVSFLALLYSLDYIEGRSLN--------STYH 113 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLV------GIYGQRSSLEAAWKYII 170 F+L + + + ++ M+ E L+S LV G+ +EA +KY+I Sbjct: 114 SLFNLLVAGLNGTFLTGDIFNMFVFFEILLLASCGLVIANEKGGVTKSSDKMEATFKYLI 173 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 + +G L +YA ++ A++++ S + +L P + + ++ FG Sbjct: 174 LNMIGSFVMLIAVASLYATVGTL-NMADLSVKISTMSAAGTL--PWHIYAIALLFIVVFG 230 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K +FPMH WLPD H APSP+SA+LS V++ ++R + +I + +++ Sbjct: 231 NKAAIFPMHYWLPDVHPTAPSPISAMLSGVMIKVGAYGILRIFFLIFRDALF-LLQPIII 289 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 + ++++ + A + Q D+K+LLAYSSV +G V + +GIG + AAL+++ NH++A Sbjct: 290 LLALVTIIIGAVSAVGQNDVKKLLAYSSVSQIGYVFLGIGIGSVYALAAALVYMANHAIA 349 Query: 351 KTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 K++LF SG ++ GTRD+ + GM K P ++ F GA+++AG+PP F+++F+ Sbjct: 350 KSMLFLTSGGIIHHAGTRDMRHMGGMNKTSPIMSIAFLIGAMSIAGLPPMGGFVAKFILF 409 Query: 411 TAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGD-----LGWLTTSPM 465 AGL + + + + L L + R + + G+ + P+ Sbjct: 410 DAGLRAEYYIPVAIALFFAVFTLFYMFRAWLLMFWGETRDVEEYGEYSSHKPSLMIALPI 469 Query: 466 VILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDL 501 V L ++ G + +P+I + + ++ + Sbjct: 470 VSLAALVFIFGVY-AEPLIALAQAIAEQLIDPQPYI 504 >UniRef50_B6YWQ6 Hydrogenase 4, subunit 3 n=2 Tax=Thermococcus RepID=B6YWQ6_THEON Length = 520 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 127/511 (24%), Positives = 230/511 (45%), Gaps = 28/511 (5%) Query: 15 LLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLW----- 69 F+L F+ + VL G+ L+ L+ A+D ++ G W Sbjct: 14 FAFALPLFSIIIKGNRKIIQAYVLIGTGLALVSTFKLFQKTYASDRPLVYTFGGWSAPVG 73 Query: 70 --LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 +D L L + + FL IYS Y+ HE L YY + +L Sbjct: 74 VIYEVDKLSALIALVTAGLMFLISIYSYRYLEHENG--------LEWYYTLYLGLEAGLL 125 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLV 186 V+ + + ++ IE T++++ LV Y R S+ A KY +I VG ++ Sbjct: 126 GVLLTGDAFNLFVMIEVTSIAAYALVMFYRDRGDSVYAGLKYALIGAVGTTMYFLALGIL 185 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLML---LAFVFLLIGFGTKTGLFPMHAWLP 243 Y +V A + +++ +A F K + P H WLP Sbjct: 186 YGAFGTVNLADLTAKVHGMDFPLTGAPVGDIVVASGVALALATWAFLIKAAIVPNHFWLP 245 Query: 244 DAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD-------FPNRLLLIFGMLS 296 +AH APSP+SA+LS +++N + LIR+ + + ++++ G +S Sbjct: 246 EAHPAAPSPISAILSGLVVNVGVYSLIRFLYTVYGGTLIPELARIVSVLSNIVVVLGAVS 305 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 A + VQ+D+KRL+AYS++ +MG + + +G+G LG+ AAL H++NH++AK LLF Sbjct: 306 SLFGAAMMTVQKDVKRLIAYSTIMHMGYLFMAVGLGTQLGLQAALFHLVNHAIAKALLFL 365 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 +G + G+R+++ + G+ K MP L+L G+PP N+F S+ + A + + Sbjct: 366 AAGAFIHAIGSRNVDDLAGLGKKMPVATFSLAIATLSLVGVPPLNVFFSKLLLFNALMEK 425 Query: 417 NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMG 476 L ++L++ + L VR+ + + KP + + + + ++L V+ + +G Sbjct: 426 G-LGPALILVISSVIALVAYVRVFHIIWLGKPRKDIKIKEHA-SMSLVCLVLAVICIIVG 483 Query: 477 THIPQPVIRILAGASTIVLSGTHDLPAQRST 507 P V ++ A+T + + A Sbjct: 484 LATPIIVDGLINPAATQAMDYNSYINAVLDL 514 >UniRef50_B1ZSF1 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSF1_OPITP Length = 493 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 183/492 (37%), Positives = 286/492 (58%), Gaps = 5/492 (1%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF 64 ++ L+ P L L R R + V ++ L + L A G + Sbjct: 1 MLLTALICIPFLIGLAGLVARPRAVLEAGNVAGFVAV---LAGGIELLRRVLVAPGGAVT 57 Query: 65 AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLF 124 G +L D L + ++ ++ T +Y++GY R ++A G ++ ++Y LF Sbjct: 58 EWGGFLRADALSVWMVLLIAIVSLATSVYAVGYFRRDLAEGAVNEHRFREFYVLTPLFAT 117 Query: 125 TMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTV 184 ML+VV +NNL VMW A+E T L+S LV +Y +++SLEAAWKY+++ VG+ LFGT+ Sbjct: 118 GMLVVVLANNLGVMWVAVEGTALASVLLVALYNRKTSLEAAWKYVMLGGVGLVLALFGTI 177 Query: 185 LVYANAASVMPQAEMAIF-WSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLP 243 YA A A M F WS +L + LDP+L+ LAF+F+L+G+GTK GL PMH WLP Sbjct: 178 FTYAAAIDKTGGAVMPSFNWSSLLAIAPQLDPSLVTLAFIFVLVGYGTKAGLAPMHPWLP 237 Query: 244 DAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFF 303 DAHSEAPSP SA+LS V L A+ L+R++I+ +G+ F R+LL FG+ S+ +A F Sbjct: 238 DAHSEAPSPTSAMLSGVSLKIAVYALLRFHILTTACLGTQFSGRMLLGFGLGSMLLAGPF 297 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLL 363 ILVQ+++KR+LAYSS+E++GL+ V +G+ PL +F ALLH+ H+L K +LF +GN+ Sbjct: 298 ILVQKNLKRMLAYSSLEHVGLICVAIGLNAPLAVFGALLHMGYHALTKPVLFFAAGNIHQ 357 Query: 364 KYGTRDLNVV-CGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLII 422 T D + G+ + MP TAV+ G GA+A+ G+PPF +F+SE I G L + Sbjct: 358 HCHTLDFRRLGGGLGRNMPVTAVVLGVGAVAVCGLPPFGLFVSELTIIAGGFGAQQLWVS 417 Query: 423 VLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQP 482 V++++ LT+V G++ +R+L+ + + + + LV +L +P+P Sbjct: 418 VIVVVSLTVVFCGVLSRLSRLLLGPAVAGRPTEPVSPGRLAVIGLPLVALLVFTVWLPEP 477 Query: 483 VIRILAGASTIV 494 V ++ A+ I+ Sbjct: 478 VFEVMNRAAAII 489 >UniRef50_A4GYW4 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=5090 Tax=Embryophyta RepID=NU5C_POPTR Length = 760 Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats. Identities = 111/457 (24%), Positives = 203/457 (44%), Gaps = 39/457 (8%) Query: 13 TPLL--FSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA---------- 60 P+L LL F ++L + L I ++ + L++ Q + + Sbjct: 18 VPMLIGMGLLLFPVSTKKLHRIWAFPSVLLLSIVMVFSIDLFIQQINSSSIYQYVWSWTI 77 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 F+ ID L + L ++ +G L +YS YM H+ + ++ + Sbjct: 78 NNDFSLEFGYLIDPLTSILLILITTVGILVLVYSDSYMSHDQGY--------LRFFVYMS 129 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVGVAFG 179 F +ML +VTS+NLI ++ E + S L+G + R + A K + VG Sbjct: 130 FFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIVSNACQKAFVTNRVGDFGL 189 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L G + +Y S Q IF + + + + + L L G K+ FP+H Sbjct: 190 LLGILGLYWITGSFEFQDLFEIFNNLIYNNDNEVHFLFVTLCAFLLFSGAIAKSAQFPLH 249 Query: 240 AWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 WLPDA E P+P+SAL+ A ++ + ++ R + + + +L+ + G+++V Sbjct: 250 VWLPDAM-EGPTPISALIHAATMVAAGIFLVARLLPLF---VVIPYIMKLIALIGIITVL 305 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 + A Q+DIKR LAYS++ +G + LG+G AAL H++ H+ +K LLF GS Sbjct: 306 LGATLAFAQKDIKRGLAYSTMSQLGYTMLALGMGS---YRAALFHLITHAYSKALLFLGS 362 Query: 359 GNVLLKY---------GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 G+++ ++++ ++ G+ K +P T + F G L+L G+PP F S+ Sbjct: 363 GSIIHSMEVIVGYSPDKSQNMVLMGGLTKHVPITKIAFLLGTLSLCGIPPLACFWSKDEI 422 Query: 410 ITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA 446 + + + + ++ L + R+ Sbjct: 423 LNDSWSYSP-IFAIIAFSTAGLTAFYMFRVYLLTFEG 458 >UniRef50_P50939 NADH-quinone oxidoreductase subunit L n=36 Tax=cellular organisms RepID=NUOL_RHOCA Length = 712 Score = 325 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 123/502 (24%), Positives = 214/502 (42%), Gaps = 41/502 (8%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 M ++LL PLL +L+ RL + V+ + + L IL+ V T + Sbjct: 1 MTTIILLAPLLGALI--GGFGWRLITEKGALVVTTGLLFLSCILSWVVFLTLPAETQHIH 58 Query: 66 AGLWLH-----------IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 W+ +D L + L ++ + L +YS GYM H+ + Sbjct: 59 LLDWIRSGALDTSWGIRLDRLTAIMLIVVTTVSALVHLYSWGYMAHD-ENWTHHEAYKAR 117 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICT 173 ++ + F F ML++VTS+NL+ M+ E ++S L+G Y ++ S AA K ++ Sbjct: 118 FFAYLSFFTFAMLMLVTSDNLVQMFFGWEGVGVASYLLIGFYYKKPSANAAAIKAFVVNR 177 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDP--TLMLLAFVFLLIGFGT 231 VG G + ++ S+ A + L L V L IG Sbjct: 178 VGDFGFALGIMGLFFLTDSIDMDVIFASAPELAKTELHFLAWEFNAANLLAVLLFIGAMG 237 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ +H WLPDA E P+PVSAL+ A ++ + ++ R + A + +++ Sbjct: 238 KSAQLFLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLVCRMSPLFEYAPEAKM---MVV 293 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 G ++ AA LVQ DIKR++AYS+ +G + V G G A+ H+L H+ Sbjct: 294 YVGAVTAFFAATVGLVQNDIKRVIAYSTCSQLGYMFVAAGSGV---YSVAMFHLLTHAFF 350 Query: 351 KTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALAL--AGMP--------- 398 K +LF G+G+V+ + +D+ G+ K +PFT + G LA+ G+P Sbjct: 351 KAMLFLGAGSVIHAMHHEQDMRNYGGLRKKIPFTFAIMMIGTLAITGVGIPFFSIGGVPV 410 Query: 399 PFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDL- 457 F +LS+ I + A + +L+ + R+ + ++ D Sbjct: 411 GFAGYLSKDAIIESAFASGNGFAFYVLVAAAGMTSFYSWRLIFLTFYGEARGDHHKHDHA 470 Query: 458 ---GWLTTSPMVILLVMMLAMG 476 + +P+ +L V + G Sbjct: 471 HESPAVMLAPLALLAVGSVLAG 492 >UniRef50_B4SLF9 NADH dehydrogenase (Quinone) n=20 Tax=cellular organisms RepID=B4SLF9_STRM5 Length = 943 Score = 325 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 137/493 (27%), Positives = 225/493 (45%), Gaps = 31/493 (6%) Query: 38 LHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGY 97 L LG +L VV+T L +DGL +F ++ IG L +Y+ Y Sbjct: 42 LAILGWLTPSVLDGQVVRTMVPWLPQIGLDFTLRLDGLAWMFAGLVLGIGALVVLYARYY 101 Query: 98 MRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG 157 + S +Y + LF+ ML +V S NL+++ E T++SS L+G + Sbjct: 102 LS--------SQDNAHRFYTYLLLFMGAMLGMVVSGNLLLLMIFWEMTSISSFLLIGFWS 153 Query: 158 QR-SSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPT 216 R + E A ++I G L G +L+ S +A + Sbjct: 154 HRQDAREGARMALVITGGGGLALLGGVLLIGRIVGSFDLDVVLA-------AGEQIRASA 206 Query: 217 LMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYII 275 L A +L G TK+ FP H WLP A + AP+PVSA L SA ++ + +L R + Sbjct: 207 LYPYALFLVLAGIFTKSAQFPFHFWLPHAMA-APTPVSAYLHSATMVKAGVFLLARLHPA 265 Query: 276 ICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPL 335 + GSD + G L++ + A+ + Q D+K LLAYS++ ++GL+ + G+ P+ Sbjct: 266 LA---GSDLFFYTVSGIGALTLLIGAWNAIFQHDLKGLLAYSTISHLGLITLLFGLSTPM 322 Query: 336 GIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALA 395 + A + HILNH+ K LF +G + + GTRD+ + G+ ++MPFT+ L +LA+A Sbjct: 323 AVVAGVFHILNHATFKASLFMAAGIIDHETGTRDMRKLGGLRRLMPFTSALAIIASLAMA 382 Query: 396 GMPPFNIFLSEFMTITAGLARNH------LLIIVLLLLLLTLVLAGLVRMAARVLMAKPP 449 G+P N FLS+ M L + + LL +A +R P Sbjct: 383 GIPLLNGFLSKEMLFAEALTAGGGPGAMRTAVSIAALLAGVFGVAYSLRFVHDTFFGPGP 442 Query: 450 QAVNR--GDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRST 507 ++R + P+ +L+V+ +A+G V +L A+ +L G + Sbjct: 443 HDLDRVPHEPPRWMKVPVELLVVICVAVGIAPALTVAPVLHAAAASIL-GNAMPEYSLAV 501 Query: 508 WHDF-LPSGTASV 519 WH F LP +++ Sbjct: 502 WHGFNLPLAMSAI 514 >UniRef50_B9DJY9 Putative NADH dehydrogenase I chain L n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DJY9_STACT Length = 824 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 132/530 (24%), Positives = 239/530 (45%), Gaps = 57/530 (10%) Query: 17 FSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLG 76 S+ FA ++ + + + + I +DGL Sbjct: 46 ASIKPFARFSGWIALIAPILSALYFVFKISQTADSKITSVSLPWMPIIDLDFAFRLDGLS 105 Query: 77 GLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLI 136 +F ++ +IG +Y+ Y+ E L +Y + LF+F ML VV ++N I Sbjct: 106 MIFALLITLIGTGVVLYANAYLSKEHD-------DLPRFYFYLILFMFAMLGVVLADNTI 158 Query: 137 VMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVGVAFGLFGTVLVYANAASVMP 195 +++ E T+++S L+ + R + + A K +I G F L G +++Y+ + + Sbjct: 159 LLYVFWELTSIASFLLISYWYNRKASQNGALKSFLITVFGGMFMLIGFIIIYSISGT--- 215 Query: 196 QAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSA 255 V + +L A V +LIG TK+ FP H WLPDA EAP+PVSA Sbjct: 216 ----NTISELVTQTDTLRSSPWFPFAVVCILIGAFTKSAQFPFHIWLPDAM-EAPTPVSA 270 Query: 256 LL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLL 314 L SA ++ L +L R+ I+ A + +++ G++++AV +F + QRD+K LL Sbjct: 271 YLHSATMVKAGLYLLFRFTPILSYA---SWVGYIVITVGIITLAVGSFVAVGQRDLKALL 327 Query: 315 AYSSVENMGLVAVELGIGG-------------PLGIFAALLHILNHSLAKTLLFCGSGNV 361 AYS++ +G++ +G G + +FA L H++NH+L K++LF G+G + Sbjct: 328 AYSTISQLGMIMSMVGFGMLTYSLHKSFVEFFVISLFAGLFHLINHALFKSVLFMGAGII 387 Query: 362 LLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL-- 419 + GTR+L + G+ K++P TA + A+A+AG+P FN FLS+ M T + L Sbjct: 388 DHETGTRNLADLGGLRKLLPVTATIMTISAMAMAGLPFFNGFLSKEMFFTTLVNGRKLPI 447 Query: 420 -------LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA----VNRGDLGWLTTSPMVIL 468 +++++ + L +RM + V + + +P++I+ Sbjct: 448 DDQIFMSIMLIIAIGASVLTFVYSLRMIKDTFFGPLNKEKLPHVPGHEPIGMYIAPVIIV 507 Query: 469 LVMML------AMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFL 512 + L +G ++ P +R + + + WH F Sbjct: 508 CGLPLFFIIPNILGKYLISPALRDINHTVVV-----EKYIPHITAWHGFT 552 >UniRef50_Q13II8 NADH dehydrogenase (Quinone) n=3 Tax=Proteobacteria RepID=Q13II8_BURXL Length = 486 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 181/484 (37%), Positives = 279/484 (57%), Gaps = 6/484 (1%) Query: 12 LTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA-GEIFAAGLWL 70 L PL+F++ FA L R V ++G + L A ++ + G +FA G Sbjct: 6 LVPLVFAIPLFAGATLALVGQRPVAPELNVGFSFLTFAAATLLAVQTETHGSVFAPGKLF 65 Query: 71 HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVV 130 +D L +A+ +G+ T I+S YMR E G+++ + Y+ + LF+F MLL + Sbjct: 66 FVDPLNVFLVALTAFVGWTTSIFSRPYMRIERDRGKMTGPRMRLYHSMYQLFIFAMLLAL 125 Query: 131 TSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANA 190 +NN+ ++W A+EA TL++ LV +Y +SLEAAWKY I+C VG+A LFGT+L+Y A Sbjct: 126 LTNNMGILWVAMEAATLATVLLVSVYRTAASLEAAWKYFILCGVGIAQALFGTILLYLAA 185 Query: 191 ASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAP 250 + + + A+ W+ + LDPT+M LAFVFLLIG+GTK GL PMH WLPDAH+E P Sbjct: 186 SRQLGGTD-ALLWTSLDAVKGSLDPTIMSLAFVFLLIGYGTKVGLVPMHNWLPDAHAEGP 244 Query: 251 SPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDI 310 +P+SA+LS +LLN AL ++R ++ A+ + P LL+ FG++SV VA F + Q+D+ Sbjct: 245 TPISAVLSGLLLNVALYAVLRCKVLADGALRNGLPGYLLVGFGLVSVLVATFSLFRQKDV 304 Query: 311 KRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDL 370 KRL +YSS+E+MGL+ G+GGP+ FA LLH+ HSL K+ +F G+ K GT+ + Sbjct: 305 KRLFSYSSIEHMGLMTFAFGLGGPIATFAGLLHMTVHSLVKSAIFFTVGHAAQKAGTQAI 364 Query: 371 NVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLT 430 + + G+L++ P G LA+ GMPPF +F SEF+ +T +++ LLL L Sbjct: 365 DDIRGLLRVSPTVGWGMMLGTLAILGMPPFGVFASEFLILTTAMSKLPWATPFLLLALAV 424 Query: 431 LVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGA 490 A VR+ V + + P+ + L + L +G +IP + A Sbjct: 425 AFAAIFVRVQRMVFGDTTARVLEHPPA----LLPVFVHLGIGLVLGLYIPPWLATWYRQA 480 Query: 491 STIV 494 + ++ Sbjct: 481 AAMI 484 >UniRef50_C6HUH6 NADH dehydrogenase (Quinone), chain L n=2 Tax=Bacteria RepID=C6HUH6_9BACT Length = 643 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 113/432 (26%), Positives = 201/432 (46%), Gaps = 34/432 (7%) Query: 66 AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFT 125 G+ L D L + L ++ + L +Y++GYM + + ++ + LF F+ Sbjct: 72 VGISLQYDHLAAVMLFMVTTVAMLVHLYTVGYMHGDSGYD--------RFFAYISLFTFS 123 Query: 126 MLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVAFGLFGTV 184 M+++V S+NL+ M+ EA L S L+ + + R S AA K I+ VG L G Sbjct: 124 MIMLVLSDNLVEMFIFWEAVGLCSYLLIVHWYERRPSWLAANKAFIMNRVGDFGFLLGIF 183 Query: 185 LVYANAASVMPQAEMAIFWSEVLKQSSLL-------DPTLMLLAFVFLLIGFGTKTGLFP 237 L Y SV S + + +L + ++ + + L +G K+ P Sbjct: 184 LAYTVFGSVRFAEIFPAIGSHLHQSVNLAAVFHGSWNVPVLDVIALLLFLGAVGKSAQIP 243 Query: 238 MHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 +H WLPDA E P+P+SAL+ A ++ + ++ R + A F ++ G ++ Sbjct: 244 LHPWLPDAM-EGPTPISALIHAATMVTAGVFMIARMNPLYNAA---PFALHVVAWTGAIT 299 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 VAA L Q DIK+++AYS++ +G + + G+G G A + H+L H K LLF Sbjct: 300 AIVAATIALTQPDIKKIVAYSTMSQLGYMVMICGLG---GYGAGIFHLLTHGAFKALLFL 356 Query: 357 GSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLA 415 G+G+V+ G +D+ + G+ K + T G+LAL+G+PPF + S+ + + Sbjct: 357 GAGSVIHSLSGEQDVFRMGGLRKYVGLTFATMLIGSLALSGIPPFAGYYSKDLILVTAYQ 416 Query: 416 RNHL--LIIVLLLLLLTLVLAGLVRMAARVLMAKPP-------QAVNRGDLGWLTTSPMV 466 + L ++ ++ +L L R+ V K AV+ + T P++ Sbjct: 417 QGPLGQMLWLIGVLTAVLTAFYSFRLLFLVFGGKERFHSESQGHAVHPHESPLTMTIPLL 476 Query: 467 ILLVMMLAMGTH 478 +L + + G Sbjct: 477 VLSIATVFAGWA 488 >UniRef50_A9B6Y2 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B6Y2_HERA2 Length = 683 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 115/430 (26%), Positives = 196/430 (45%), Gaps = 31/430 (7%) Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 ID L + ++ +G L +Y++GYM H+ ++ + +LF+ Sbjct: 113 LEVPFGFLIDQLSVTMMLLVTGVGTLIHLYAVGYMSHDE--------RPTRFFVYLNLFI 164 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVAFGLFG 182 ML++V NN ++++ E L S L+G + + R A+ K + VG L Sbjct: 165 VAMLMLVMGNNFVMLFLGWEGVGLCSFLLIGFWFEQRDPPWASVKAFVTNRVGDFGLLMA 224 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLD------------PTLMLLAFVFLLIGFG 230 ++A A ++ + EVL+Q ++ T LL+G Sbjct: 225 MFAIWALARKPDGTFLHSLVFREVLEQGTVFSLQQYSTFFMGTQYTAAGAIAFMLLLGVT 284 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ P+ WLPDA + P+PVSAL+ A ++ + ++IR + I S + Sbjct: 285 GKSAQIPLFVWLPDAMA-GPTPVSALIHAATMVTAGVYLMIRTHPIFE---LSPAVQSSV 340 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 G+ + VAA L Q DIK++LA+S+V +G + +G+G AA+ H+L H + Sbjct: 341 TFIGVATALVAASIALGQYDIKKVLAFSTVSQLGFMVAAVGMG---AYVAAMFHLLTHGI 397 Query: 350 AKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 K LLF GSG+V+ +G +D+ + G+ K MP T + G + L G P + F S+ Sbjct: 398 FKALLFLGSGSVIHGFGNEQDMRKMGGLRKKMPVTFWTYIVGTMGLIGFPLVSGFWSKDE 457 Query: 409 TITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP-QAVNRGDLGWLTTSPMVI 467 I +H + +LL+L L + R + V + Q ++ + T P+ I Sbjct: 458 IIGHAFDHDHRTVGMLLILGAVLTSFYMGRQISMVFFGEQRDQHIHAHESSRWMTIPLAI 517 Query: 468 LLVMMLAMGT 477 L V+ LA G Sbjct: 518 LAVLTLASGL 527 >UniRef50_Q2W3J5 NADH:ubiquinone oxidoreductase subunit 5 n=6 Tax=Alphaproteobacteria RepID=Q2W3J5_MAGSA Length = 642 Score = 325 bits (833), Expect = 3e-87, Method: Composition-based stats. Identities = 119/498 (23%), Positives = 209/498 (41%), Gaps = 42/498 (8%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE--- 62 M + PLL +++ R R ++ + +L+ + Q A GE Sbjct: 1 MITATVFLPLLGAVVAGLFG--RFIGDRGAQIVTCALLITSAVLSGLIFQKVALGGEAQT 58 Query: 63 ----------IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 + L +D L + L ++ + +YS+GYM H+ ++ Sbjct: 59 VVVAEWIRSGTMSVNWSLKVDTLTAVMLIVVTWVSAAVHVYSVGYMSHDP--------SI 110 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIII 171 ++ + LF F ML++VTS+NL+ M+ E ++S L+G + ++ S AA K ++ Sbjct: 111 WRFHSYLSLFTFAMLMLVTSDNLVQMFFGWEGVGVASYLLIGFWYEKPSASAAAIKAFVV 170 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTL--MLLAFVFLLIGF 229 VG G VY SV A A + + + + + L +G Sbjct: 171 NRVGDFGFALGIFGVYFLFGSVGFDAIFAAAPEKANATVNFFGGQWHAITICCLLLFVGA 230 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRL 288 K+ +H WLPDA E P+PVSAL+ A ++ + ++ R + SD + Sbjct: 231 MGKSAQLGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFMVARMSPLFE---FSDTALTV 286 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 + + G + AA VQ DIKR++AYS+ +G + +G+ AA+ H++ H+ Sbjct: 287 VTVIGAATAIFAATVGCVQNDIKRVIAYSTCSQLGYMFFAIGVS---AYQAAIFHLMTHA 343 Query: 349 LAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 K LLF G+G+V+ +D+ + G+ K + T VL G+LALAG+P F + S+ Sbjct: 344 FFKALLFLGAGSVIHAMSDEQDIRRMGGIWKHVKVTWVLMWIGSLALAGVPFFAGYYSKD 403 Query: 408 MTITAGLARNHLL---IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV----NRGDLGWL 460 + A A + + L L R+ +P + + + Sbjct: 404 TILEAAWASHTIAGQGAYWLGCTAAFLTAFYSWRLLLLTFHGRPRADEHVMAHVHESPAV 463 Query: 461 TTSPMVILLVMMLAMGTH 478 P++ L L G Sbjct: 464 MLIPLLFLATGALFAGWA 481 >UniRef50_C6D5D4 Proton-translocating NADH-quinone oxidoreductase, chain L n=82 Tax=Bacillales RepID=C6D5D4_PAESJ Length = 625 Score = 325 bits (833), Expect = 3e-87, Method: Composition-based stats. Identities = 133/484 (27%), Positives = 225/484 (46%), Gaps = 32/484 (6%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALW------VVQTAADAG 61 L+ L P LL A + A + + SL ++ +L V + D+ Sbjct: 9 WLIPLFPFASFLLLTALGRSYRLAGVLIGSIGSLASLVMSLLVFIERLGPNAVDYSGDSY 68 Query: 62 EIFAAG-----LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 + G + I L L L I+ V+ FL +YS GYM+ + + +Y Sbjct: 69 KWIGLGEYTLKIGFEITNLNALMLVIVTVVSFLVNVYSAGYMKKDE--------RITVFY 120 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKY-IIICTVG 175 G+ LF F ML +V S+N++V + E + S LVG + + + AA K I+ +G Sbjct: 121 GYVALFTFAMLGLVLSDNMLVFYMFWELVGVCSFLLVGFWYAKPAARAAAKKAFIVTRIG 180 Query: 176 VAFGLFGTVLVYANA-ASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 A L G ++++ + + + ++E QS + T+ + L +G K+G Sbjct: 181 DAGLLLGIIVLFWYMPGHALDFSSIHNVFTE--GQSGTITMTITTSIALLLFMGVIGKSG 238 Query: 235 LFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 FP+H WLPDA E P+P+SAL+ A + A + L+ I +A S + FG Sbjct: 239 QFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLLARTFDIFEASAS--AMHTVAYFGG 295 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLL 354 + AA L Q DIKR+LAYS++ +G + + +G+G + + H+ H+ K LL Sbjct: 296 FTAIFAATVALAQNDIKRILAYSTISQLGYMVMAMGLGS---MTGGVFHLFTHAFFKALL 352 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 F +G+V+ T++++ + G+ M TA F GAL+L+G+PPF+ F S+ + + L Sbjct: 353 FLAAGSVIHAVHTQNIHEMGGLGSKMRITAWTFAIGALSLSGIPPFSGFWSKDAILASAL 412 Query: 415 ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP--QAVNRGDLGWLTTSPMVILLVMM 472 N L + L + R+ V M K Q + + T P+++L V+ Sbjct: 413 DENPFL-FAVGLAAAFCTALYMSRLFFIVFMGKSRLQQPAEVKESSKVMTIPLLVLAVIS 471 Query: 473 LAMG 476 + G Sbjct: 472 VGAG 475 >UniRef50_B6YQ51 NADH dehydrogenase I subunit L n=32 Tax=Bacteroidetes RepID=B6YQ51_AZOPC Length = 637 Score = 324 bits (832), Expect = 4e-87, Method: Composition-based stats. Identities = 117/505 (23%), Positives = 217/505 (42%), Gaps = 45/505 (8%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLIL---------------ALW 52 L+++ P + + S + + I +W Sbjct: 4 LLIIIVPFVLFFVLGLLGTNLKSNISGIIGTGGMSICTFTAYVMAYQYFFRIGKKGEGVW 63 Query: 53 VVQTAADAGEIFAAG-----LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGEL 107 D + G L + +D + + L ++ + + IYS+GYM+ E+ Sbjct: 64 KEIVPLDFQWLHFMGEMHINLGVLLDPISVMMLVVITTVSLMVHIYSLGYMKGEIG---- 119 Query: 108 SPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAW 166 YY F LF F+ML +V + N+ M+ E +SS L+G Y + S++ A+ Sbjct: 120 ----FQRYYAFLSLFSFSMLGLVVATNIFQMYIFWELVGVSSYLLIGFYYIKPSAVAASK 175 Query: 167 KYIIICTVGVAFGLFGTVLVYANAASVMP---QAEMAIFWSEVLKQSSLLDPTLMLLAFV 223 K I+ L G +++ + A A+ + + L ++ + A Sbjct: 176 KAFIVTRFADLGFLIGILILSYYTRTFDFRALTANNAVLVTASTAGRTFLGLSVSVWALA 235 Query: 224 FLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGS 282 + +G K+ +FP+H WLPDA E P+PVSAL+ A ++ + ++ R + + + Sbjct: 236 LIFMGGAGKSAMFPLHIWLPDAM-EGPTPVSALIHAATMVVAGVYLITRLFPVYF--FAA 292 Query: 283 DFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGP-----LGI 337 +++ G + A +VQ DIKR+LA+S++ + + LG+ LG Sbjct: 293 PSVLKMIAFVGAFTSFFTAIIAVVQTDIKRVLAFSTISQISYMMAALGVSKYGGYEGLGY 352 Query: 338 FAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGM 397 A++ H+ H+ K LLF G+G+V+ + ++N +CG+ K MP T + F LA+AG+ Sbjct: 353 TASMFHLFTHAFFKALLFLGAGSVIHVVNSNEMNNMCGLHKYMPITNITFLIACLAIAGI 412 Query: 398 PPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ---AVNR 454 PPF+ F S+ + A L ++ +L ++ L + R+ + + Sbjct: 413 PPFSGFYSKDEVLVATLHYQPIIFWILWVVAG-LTAFYMFRLYFCIFWNGEKKYDIYHAS 471 Query: 455 GDLGWLTTSPMVILLVMMLAMGTHI 479 + +L P+VIL V + G Sbjct: 472 HESPFLMIFPLVILSVFSVFGGLIP 496 >UniRef50_Q1IS43 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Bacteria RepID=Q1IS43_ACIBL Length = 676 Score = 324 bits (831), Expect = 5e-87, Method: Composition-based stats. Identities = 112/522 (21%), Positives = 210/522 (40%), Gaps = 64/522 (12%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALW-VVQTAAD 59 M ++ ++ L PL + + KR + L + + + Sbjct: 1 MDQNLHLWIIPLLPLAGAAINGLLGKRFPNKLVATIALFFTAASFGYFCYVASQFVHLSQ 60 Query: 60 AGEIFAAGLWL-----------HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 + + G W+ ++D L + L ++ +GFL +YS GYM HE + Sbjct: 61 IPHVESYGTWIQVGSFKVEFGAYLDQLTLIMLGVVTGVGFLIHVYSAGYMEHEGGY---- 116 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWK 167 ++ + +LF+F ML +V ++ ++M+ E L+S L+G + ++ S+ +A K Sbjct: 117 ----YRFFAYLNLFMFFMLTLVLGSSYLLMFVGWEGVGLASYLLIGFFFRKHSAAQAGKK 172 Query: 168 YIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLI 227 I VG L G L+ N ++ + + L + LLI Sbjct: 173 AFITNRVGDFGFLIGLFLIIQNWNTL----QYTEVFKAASGYGVETHAGLFTAIGICLLI 228 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPN 286 G K+ P++ WLPDA E P+PVSAL+ A ++ + ++ R I + S Sbjct: 229 GACGKSAQIPLYVWLPDAM-EGPTPVSALIHAATMVTAGVYMVTRSNAIFSR---SPHAL 284 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 L+ G + AA + Q DIKR+LAYS++ +G + + G+G + + H++ Sbjct: 285 LLVACIGAATAIFAATIGITQTDIKRVLAYSTISQLGYMFLACGVG---AYASGVFHLMT 341 Query: 347 HSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 H+ K LLF +G+V+ G +D+ + G+ K +P+T + +AG PP F S Sbjct: 342 HAFFKALLFLAAGSVIHAVGGEQDMRNMGGLRKYIPWTFWVMTIATFTIAGFPPLAAFFS 401 Query: 406 EFMTITAGLARNHL----------LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV--- 452 + + + L + + L+ + + R + A Sbjct: 402 KDEILWKVWSSESLRPVVGEGFNKFLWAVGLITAGVTSFYMFRQWFMTFFGEYRGAKTEA 461 Query: 453 -----------------NRGDLGWLTTSPMVILLVMMLAMGT 477 + + +P+V+L ++ A G Sbjct: 462 SHGHAPAHGAHDDHGHGEPHESPMIMIAPLVVLAILSFAGGW 503 >UniRef50_C4K6N0 NADH dehydrogenase I chain L, membrane subunit n=37 Tax=Gammaproteobacteria RepID=C4K6N0_HAMD5 Length = 633 Score = 324 bits (831), Expect = 5e-87, Method: Composition-based stats. Identities = 112/441 (25%), Positives = 208/441 (47%), Gaps = 21/441 (4%) Query: 62 EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVA---HGELSPVTLCDYYGF 118 + F + L +DGL L+++ +GFL +Y+ YMR + + E + V ++ + Sbjct: 79 DYFHIPITLMLDGLSLTMLSVVIGVGFLIHLYASWYMRAKHSSHDEKEQAKVGYARFFAY 138 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVGVA 177 +LF+ +M+++V ++NL++M+ E L S L+G Y + AA K +I +G Sbjct: 139 TNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTHPANGAAAMKAFVITRIGDV 198 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 F G ++Y ++ + M + + + + + A + LL G K+ P Sbjct: 199 FLALGLFILYQQLGTLNIRELMILAPTHLA-----VGSDAITWATLMLLGGAVGKSAQLP 253 Query: 238 MHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 + WL DA + P+PVSAL+ A ++ + ++ R + + A I G ++ Sbjct: 254 LQTWLADAMA-GPTPVSALIHAATMVTAGVYLIARTHGLFLMAPEILHWAG---IIGAIT 309 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + +A F LVQ DIKR+LAYS++ +G + + LG+ AA+ H++ H+ K LLF Sbjct: 310 LLLAGFAALVQTDIKRILAYSTMSQIGYMFLALGV---QAWDAAIFHLMTHAFFKALLFL 366 Query: 357 GSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPP-FNIFLSEFMTITAGL 414 +G+V+L +++ + G+ K +PF + F G ALA +P F S+ + Sbjct: 367 SAGSVILACHYEQNIFNMGGLRKPLPFLYLCFLVGGSALAALPVITAGFYSKDEILWGAW 426 Query: 415 ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV--NRGDLGWLTTSPMVILLVMM 472 N++ +++ L+ L RM V PP+ P+ +LL++ Sbjct: 427 LHNNIELMIAGLVGAFLTAVYTFRMILIVFHGAPPEHPPYKAAPREISHHVPLWVLLILS 486 Query: 473 LAMGTHIPQPVIRILAGASTI 493 +G I P+ +L + Sbjct: 487 TFIGALIMPPLAGVLPENHAL 507 >UniRef50_C5VLQ3 NADH dehydrogenase subunit 5 n=10 Tax=Bacteroidales RepID=C5VLQ3_9BACT Length = 684 Score = 324 bits (831), Expect = 6e-87, Method: Composition-based stats. Identities = 110/449 (24%), Positives = 191/449 (42%), Gaps = 32/449 (7%) Query: 62 EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYM--RHEVAHGELSPVTLCDYYGFF 119 E+ + + + + L ++ + + IYS GYM R E E +Y + Sbjct: 94 ELLTFNIGFRLSPISVMMLIVITTVSLMVHIYSFGYMAERDENYKFEEYEHGFQRFYAYL 153 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAWKYIIICTVGVAF 178 LF +ML +V + N+ M+ E + S L+G Y + +++ A+ K I+ F Sbjct: 154 SLFTMSMLGLVVATNIFQMYLFWELVGVCSYLLIGFYYPKHTAVHASKKAFIVTRFADLF 213 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLL--AFVFLLIGFGTKTGLF 236 L G + + + E L + +L A + IG K+ +F Sbjct: 214 FLIGILFFSFYVGTFNYDLNVNPGLVETLNGLAKNPHLTWVLPTALFLMFIGGAGKSAMF 273 Query: 237 PMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 P+H WLPDA E P+PVSAL+ A + A + + + I G+ + + Sbjct: 274 PLHIWLPDAM-EGPTPVSALIHAATMVVAGVFQVASLLPIYVQFGAQEQLHWIAWIAAFT 332 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGI-----------------GGPLGIFA 339 AA QRDIKR LA+S++ + + V LG+ G LG A Sbjct: 333 AFYAAAVACAQRDIKRGLAFSTISQIAYMLVALGVCFYEKEHGSFYSAEYLHHGGLGYMA 392 Query: 340 ALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPP 399 A+ H+ H++ K LLF SG +++ G+ + G+ K MP T + F G LA+AG+PP Sbjct: 393 AMFHLFTHAMFKALLFLCSGAIIVIIGSNFKEYMGGLHKYMPITNICFLIGCLAIAGIPP 452 Query: 400 FNIFLSEFMTITAGLARNHL---LIIVLLLLLLTLVLAGLVRMAARVLMAK------PPQ 450 F F S+ I+A A + + ++ L+ + + R+ + + P Sbjct: 453 FAGFFSKDEIISACNALPGVEGQALKWIMTLVAGMTAFYMFRLYYVIFWGESYYEQDPEN 512 Query: 451 AVNRGDLGWLTTSPMVILLVMMLAMGTHI 479 ++ ++ P+V L ++ + G Sbjct: 513 RRRPQEVPFVMWGPLVFLAIISITAGWIP 541 >UniRef50_Q3J3E6 NADH dehydrogenase I chain L n=72 Tax=cellular organisms RepID=Q3J3E6_RHOS4 Length = 720 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 121/498 (24%), Positives = 207/498 (41%), Gaps = 39/498 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA----- 60 M ++LL PLL +L+C RL R V+ + + L L W++ D Sbjct: 1 MATIILLAPLLGALIC--GFGWRLIGERAGQVIAT-ALVFLAALLSWIIFLGFDGEMYQV 57 Query: 61 -------GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 + + +D L + L ++ + L +YS GYM H+ Sbjct: 58 VLLRWIESGSLSTEWAIRVDRLTAIMLVVVNTVSALVHLYSFGYMAHDDNWNHHEHYK-A 116 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIIC 172 ++ + F F ML +VTS+NL+ M+ E ++S L+G Y ++ S AA K ++ Sbjct: 117 RFFAYLSFFTFAMLTLVTSDNLVQMFFGWEGVGVASYLLIGFYYRKPSANAAAIKAFVVN 176 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLL--DPTLMLLAFVFLLIGFG 230 VG G + ++ S+ A + L + L V L IG Sbjct: 177 RVGDFGFALGIMALFFLVDSIRFDDVFAAGPELAQTNLTFLWTEWNAANLIGVLLFIGAM 236 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ +H WLPDA E P+PVSAL+ A ++ + ++ R + A + ++ Sbjct: 237 GKSAQLGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLVCRMSPLYEFAPDA---KTMI 292 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 ++ G + AA LVQ DIKR++AYS+ +G + V G+G AA+ H+ H+ Sbjct: 293 VVVGATTAFFAATVGLVQNDIKRVIAYSTCSQLGYMFVAAGVGV---YSAAMFHLFTHAF 349 Query: 350 AKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALAL--AGMP----PFNI 402 K +LF G+G+V+ + +D+ G+ +P T G LA+ G+P F Sbjct: 350 FKAMLFLGAGSVIHAMHHEQDMRNYGGLRSKIPLTFWAMMIGTLAITGVGIPLTHIGFAG 409 Query: 403 FLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ----AVNRGDLG 458 FLS+ I + + LL++ R+ K + + Sbjct: 410 FLSKDAIIESAWVGSGYAFW-LLVVAACFTSFYSWRLIFLTFFGKERGDHHAHDHAHESP 468 Query: 459 WLTTSPMVILLVMMLAMG 476 + P+ +L + G Sbjct: 469 TVMLIPLGVLALGAAFSG 486 >UniRef50_C5CEV1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEV1_KOSOT Length = 492 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 140/510 (27%), Positives = 240/510 (47%), Gaps = 30/510 (5%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA---- 60 ++ L++ PL L ++ + + + + + +L ++++ A Sbjct: 1 MIIPYLVIIPLAAGFLIVLLGRKNKVLPELIALTATFSLLAISLLLFPMIESEGGAILYE 60 Query: 61 --GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 G + ID L + ++ + L+ IYS+GYMR + +YY Sbjct: 61 LSGWKIPYTISFVIDYLSAFLVTMVSALAVLSTIYSVGYMRKFSG--------IWNYYAL 112 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAF 178 L + + V + +L ++ +E +++ LV +G+ EAA+KY I+ ++ + Sbjct: 113 LMLMITGLNGVAITGDLFNLFVFMEIALIATYALVAFHGEAEHYEAAFKYAIMSSLSSSL 172 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 LFG VY+ +S+ + ++ L + L GFG K +FP Sbjct: 173 VLFGIGCVYSMTSSLTLMQI----------SNKMIGVGETNLVYALFLTGFGLKAAMFPF 222 Query: 239 HAWLPDAHSEAPSPVSALLSAVLLNC-ALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSV 297 H+WLPDAH APSPVSA+LS VL+ LIR + ++ S+ L LIFG LS+ Sbjct: 223 HSWLPDAHPSAPSPVSAMLSGVLIKVLGAYTLIRVFYMVFGV--SELVKELFLIFGTLSM 280 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 + A ++Q+DIKR+L +SSV MG + LGIG PLG+ A+ H+LNH++ K LLF Sbjct: 281 VIGALVAVMQKDIKRMLGFSSVSQMGYIIFALGIGTPLGVLGAIYHMLNHAVLKGLLFMD 340 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 +G V L GTRD+ + G+ T V +L ++G+PPF F S+ + ITA + Sbjct: 341 AGAVELIEGTRDMEEMKGVSDRT--TYVTSLMASLGISGVPPFGGFFSKLIIITAAIYTG 398 Query: 418 HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGT 477 + ++ L + + L + M + + + ++G L PM+IL V+ LA Sbjct: 399 KFIYAIIALAVSVITLGYYLGMLKKAFRKRNKEVNDKGSLPASLKIPMIILAVLTLATAL 458 Query: 478 -HIPQPVIRILAGASTIVLSGTHDLPAQRS 506 ++P IL + + T + + Sbjct: 459 FYVPVVRENILEKVVSCITDRTAYIALFTA 488 >UniRef50_B2IHV5 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=cellular organisms RepID=B2IHV5_BEII9 Length = 666 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 130/521 (24%), Positives = 206/521 (39%), Gaps = 63/521 (12%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI-- 63 M A ++ PL L+ R + A + V SL L+ + VQ Sbjct: 1 MHAAIVFLPLAGFLIA-GIFGRVIGARASEIVTTSLLFVAALLSWITFVQVGLGVAPART 59 Query: 64 -----------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 L ID L + L ++ + L +YSIGYM + + Sbjct: 60 ELLAPWFDSGALQVDWALRIDTLTAVMLVVVTTVSALVHLYSIGYMHEDPSR-------- 111 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIII 171 ++ + F FTML +VT++NL+ M+ E L+S L+G + ++ S AA K + Sbjct: 112 SRFFAYLSFFTFTMLTLVTADNLVQMFFGWEGVGLASYLLIGFWYEKPSACAAAIKAFVA 171 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLL--DPTLMLLAFVFLLIGF 229 VG L G LV+ SV A S K + D M + + L +G Sbjct: 172 NRVGDFGFLLGIFLVFLLTHSVSFDQVFAAAPSLAGKSLHVFGHDFDAMTITCLLLFMGA 231 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRL 288 K+ F +H WLPDA E P+PVSAL+ A ++ + ++ R + QA Sbjct: 232 MGKSAQFLLHTWLPDAM-EGPTPVSALIHAATMVTAGVFMVARLSPLFEQA---PVALSF 287 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 + I G + AA LVQ DIKR++AYS+ +G + V LG+G G + H+ H+ Sbjct: 288 VTIIGATTAFFAATVGLVQNDIKRVIAYSTCSQLGYMFVALGVG---GYSLGIFHLFTHA 344 Query: 349 LAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 K LLF G+G+V+ + +D+ + + +PFT + G LAL G P + S+ Sbjct: 345 FFKALLFLGAGSVIHAMHHEQDMRKMGALRDRIPFTFWMMTLGTLALTGFPLTAGYFSKD 404 Query: 408 MTITAGLAR---NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP---------------- 448 I A A L V ++ L R+ Sbjct: 405 AIIEAAFASERTGALYGYVATVVAAGLTSFYSWRLVFMTFFGPAHWGADAHAAHDDHGHA 464 Query: 449 ----------PQAVNRGDLGWLTTSPMVILLVMMLAMGTHI 479 A+ + ++ P++IL + G Sbjct: 465 HASGHDDHGHAHALEPHEPPFVMRLPLLILGAGAVFAGLLF 505 >UniRef50_B9ZEN4 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZEN4_NATMA Length = 678 Score = 322 bits (825), Expect = 3e-86, Method: Composition-based stats. Identities = 140/514 (27%), Positives = 229/514 (44%), Gaps = 46/514 (8%) Query: 8 ALLLLTPLLFSLLCFACRK---RRLSATRTVTVLHSLGITLLLILA----------LWVV 54 + L PL+ ++ K ++ + + SL +++L+++A L+ Sbjct: 9 PAIALFPLVAFVVALTFGKYMPKKGALAGIIATGGSLALSVLMLVAVASGEVYHETLYQW 68 Query: 55 QTAADAGEIFAAGLWLH----IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPV 110 A EI A G+ ID L L L I+ +I FL I+S+GYM E G Sbjct: 69 AIGDAASEIGADGIEFTFGILIDPLAALMLVIVSLIAFLVHIFSLGYMNAEGETG----- 123 Query: 111 TLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYI 169 L YY LF F+ML V ++NL++ + E L S L+G + RS+ AA K Sbjct: 124 -LPRYYASLGLFTFSMLAFVYADNLLMAFMFFELVGLCSYLLIGFWFRTRSAPSAAKKAF 182 Query: 170 IICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLK------QSSLLDPTLMLLAFV 223 ++ G F L G V + A +V + + + T + + + Sbjct: 183 LVTRFGDYFFLLGVVAIAATFGTVAFAGDNSFVTAAETAIDNGDTLFGFGAETWVTITAL 242 Query: 224 FLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGS 282 +L G K+ FP+H WLPDA E P+ VSAL+ A ++ + ++ R S Sbjct: 243 LVLGGVIGKSAQFPLHTWLPDAM-EGPTTVSALIHAATMVAAGVYLVARM---FGYYALS 298 Query: 283 DFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALL 342 ++ G + AA +V+ DIK++LAYS++ G + + LG+G G A + Sbjct: 299 PTALAIIAFVGGFTALFAATMGVVKDDIKQVLAYSTISQYGYMMLGLGVG---GYVAGVF 355 Query: 343 HILNHSLAKTLLFCGSGNVL-LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFN 401 H++NH+ K LLF G+G V+ L + +D+ + G+ P T F GALALAG+ PF+ Sbjct: 356 HLMNHAFFKALLFLGAGAVIVLMHHEQDMWKMGGLKDKAPITYYTFLAGALALAGIIPFS 415 Query: 402 IFLSEFMTITAGLARN-----HLLIIVLLLLLLTLVLAGLVRMAARVLMAKP--PQAVNR 454 F S+ + L L + L+ + RM +P A + Sbjct: 416 GFWSKDEILYDALIIGIEEPIILAAYAMALVAVFFTGFYTFRMVFLTFHGEPRSEAAEDP 475 Query: 455 GDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILA 488 D+GW +P+++L V+ L G PV ++ Sbjct: 476 HDIGWSMKAPLIVLGVLALVAGIANLAPVAKLAQ 509 >UniRef50_A7HHY8 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Anaeromyxobacter RepID=A7HHY8_ANADF Length = 676 Score = 321 bits (824), Expect = 4e-86, Method: Composition-based stats. Identities = 118/495 (23%), Positives = 209/495 (42%), Gaps = 48/495 (9%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHS-LGITLLLILAL-------------- 51 ++L PL +++ +R T+ L + +G ++ +A Sbjct: 15 LWAIILFPLAGAIVNGLVGRRIGKGNVTLVALGAMIGALIVSTVAFAWVVQGGVLHFRGE 74 Query: 52 -WVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPV 110 W+ D + + G L +D L G + ++ +G L IYS YM HE G Sbjct: 75 PWIRVAGPDGRALVSIGWGLFVDRLSGTMIMVVTGVGTLIHIYSASYMSHEDDAG----- 129 Query: 111 TLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYI 169 Y+ + +LF+ ML +V + L++ + E L S L+G + + A K Sbjct: 130 -YARYFTYLNLFVAAMLTLVLGDTLVLTFVGWEGVGLCSYLLIGFWYTDPAKAFAGRKAF 188 Query: 170 IICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWS-------EVLKQSSLLDPTLMLLAF 222 + +G L G + + + AI + +V + + A Sbjct: 189 VTNRIGDFGFLIGLFALLSIFGTASYGDLQAIARTIDPAATIQVGTFAGRTFQWAITFAL 248 Query: 223 VFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIG 281 + L +G K+ P++ WLPDA + P+PVSAL+ A ++ + ++ R + A Sbjct: 249 IGLFVGACGKSAQLPLYVWLPDAMA-GPTPVSALIHAATMVTAGVYLVARNAYLFSLAPA 307 Query: 282 SDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAAL 341 + + I G L+ AA VQ DIK++LAYS+V +G + + +G+G +A + Sbjct: 308 A---MATVTIVGALTALFAALIAFVQTDIKKVLAYSTVSQLGFMFIGVGVG---AWWAGV 361 Query: 342 LHILNHSLAKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 LH++ H+ K LF G+G+V+ G D+ + G+LK MP TA FG LA+ G P Sbjct: 362 LHLVTHAFFKACLFLGAGSVMHGMGDETDIRKMGGLLKKMPHTAATFGIATLAITGFVPL 421 Query: 401 NIFLSEFMTITAGLARNHLLI-------IVLLLLLLTLVLAGLVRMAARVLMAKPP--QA 451 + F S+ + L ++ VL + + R+ + KP A Sbjct: 422 SGFWSKDAILGNALFSHNPAWHQVGQIAYVLGAVAALGTAFYMSRLFFLTFVGKPRTHAA 481 Query: 452 VNRGDLGWLTTSPMV 466 + + + T P+ Sbjct: 482 EHAHESSPVMTIPLW 496 >UniRef50_B2A693 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Clostridia RepID=B2A693_NATTJ Length = 499 Score = 321 bits (823), Expect = 4e-86, Method: Composition-based stats. Identities = 124/504 (24%), Positives = 236/504 (46%), Gaps = 25/504 (4%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG----- 61 F L ++ L+ + F + + L+L++A+++V + G Sbjct: 5 FHLPIIIVLIGIFVSFILPGLHFIKKNLNEYVSLSAMILMLVIAIYLVIEVSSNGPFTYV 64 Query: 62 ---EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 G+ ++D LG I+ IGFL +Y+ + HE+ L YY Sbjct: 65 VGEWAPPWGIEFNVDYLGVYMTLIITGIGFLALLYASRDLHHELQEN-----ALSLYYPL 119 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAF 178 + L + +M+ +V +N++ ++ +E T L+S ++ + + ++EA+ KY+++ +G A Sbjct: 120 YMLLMASMIGMVLTNDIFNLFVLLEITLLTSVAIICVKENKDTIEASLKYLMLNALGSAT 179 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 L G L+Y + + ++ L + PT+++ +GFG K+ LFPM Sbjct: 180 VLMGIALLYIITGHLNMT-----YIAQELAVNFEQYPTVIMAIVALFFVGFGVKSALFPM 234 Query: 239 HAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDF--PNRLLLIFGMLS 296 H WLPDAH APSP SA+LS +++ ++ LIR+Y I+ + +LL F Sbjct: 235 HVWLPDAHGSAPSPSSAVLSGLVIKVYVVSLIRFYFIVLPEEILELMPVGEILLWFAAAG 294 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + + + F + Q DIK++LAYSSV + V + +G+ LLHILNH++ K++LF Sbjct: 295 MILGSMFAIAQEDIKKMLAYSSVAQISYVFLGIGLLSLTSFQGGLLHILNHAIIKSMLFL 354 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 +G ++ G R ++ + G+ P + F GA A+ G+P N F+S++ L Sbjct: 355 IAGAIIYTSGIRKISHMHGVGLRYPLIMICFTLGAFAMIGIPGTNGFISKWYLALGALDA 414 Query: 417 NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA----VNRGDLGWLTTSPMVILLVMM 472 ++++L+ L + + A + L W P+V+ ++ Sbjct: 415 GRPFFVLVILVSSLLNGVYYLPIVVNSFFGDMQDADINFIKCNKLPWQMFFPIVLCGFLI 474 Query: 473 LAMGTHIPQPVIRILAGASTIVLS 496 + +G + P+ ++ A ++ Sbjct: 475 IFIGLYPALPL-SLVEPAVEFLMP 497 >UniRef50_Q49W91 Na(+)/H(+) antiporter subunit A1 n=19 Tax=Bacillales RepID=MNHA1_STAS1 Length = 805 Score = 321 bits (823), Expect = 5e-86, Method: Composition-based stats. Identities = 130/549 (23%), Positives = 240/549 (43%), Gaps = 55/549 (10%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALW-------VVQTAA 58 + + +L PL+F+L+ + VL + + L+ + A Sbjct: 3 LLHIAVLLPLIFALIIPFVYRFYKRIHLGWFVLPIPVVLFIYFLSYISTTMSGNTIMEKA 62 Query: 59 DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 + F L++DGLG LF ++ IG L +YSI Y+ + G +Y + Sbjct: 63 NWMPHFGMNFNLYVDGLGLLFSLLITGIGCLIVLYSISYLSRQEQLGH--------FYCY 114 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVA 177 LF+ ML +V S+NLI+++ E T+ SS L+ + + +S+ A K +++ G Sbjct: 115 LLLFMGAMLGLVLSDNLIILYLFWELTSFSSFLLISFWRDKQASIYGAQKSMLVTVFGGL 174 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L G +L+ + Q + S + + + + +LIG TK+ FP Sbjct: 175 SLLGGIILLSIAGGTTSIQELIN-------NASEIQTSPFFIFSMILVLIGAMTKSAQFP 227 Query: 238 MHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 + WLPDA EAP+PVSA L SA ++ L ++ R I + G + G+++ Sbjct: 228 FYVWLPDAM-EAPTPVSAYLHSATMVKAGLYLVARMTPIFAVSQG---WIWTVTAVGLIT 283 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGP-------------LGIFAALLH 343 + A+ Q+D+K +LA+S+V +G++ LG+G AA+ H Sbjct: 284 LFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGVGAVSFHFEGAESQIYIAAFTAAIFH 343 Query: 344 ILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 ++NH+ K LF +G V GTRD+ + G+L IMP + + +L++AG+PPFN F Sbjct: 344 LINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITLITSLSMAGIPPFNGF 403 Query: 404 LSEFMTITAGLARNH----------LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA-- 451 LS+ + + + + +LI + ++ +R ++ + + Sbjct: 404 LSKEKFLESMIEVTNVNLFSLDTLGILIPITAIIGSVFTFVYSIRFIGQIFLGSYKEDKL 463 Query: 452 -VNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHD 510 ++ L IL ++++ G I+ A + T+ +H Sbjct: 464 PKKAHEVSPLMLISPSILAILVIVFGLFPAILSGSIIEPAVNAIGQTTNSTAEF-HMFHG 522 Query: 511 FLPSGTASV 519 F P+ +++ Sbjct: 523 FTPAFFSTL 531 >UniRef50_Q2S2L2 NADH dehydrogenase I, L subunit n=3 Tax=Rhodothermaceae RepID=Q2S2L2_SALRD Length = 665 Score = 320 bits (822), Expect = 6e-86, Method: Composition-based stats. Identities = 121/526 (23%), Positives = 216/526 (41%), Gaps = 58/526 (11%) Query: 25 RKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAG-----LWLHIDGLGGLF 79 R+ + T V +T+ L + AD AAG ID L L Sbjct: 34 RETLVGTVGTAVVAIPFVLTVYLFVTFGGDPIVADYFTWMAAGDLDLSFAYRIDQLSLLM 93 Query: 80 LAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMW 139 ++ +G + +YSIGYM + + ++ + +LF+F ML +V +NNL V++ Sbjct: 94 TGVVTGVGGVIHLYSIGYMHGDAGY--------WRFFAYLNLFIFAMLNLVLANNLPVLF 145 Query: 140 AAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAE 198 E L S L+G + S+ AA K I+ VG L LV+ S+ Sbjct: 146 LGWEGVGLCSYLLIGFWYTDLSNSAAANKAFIVNRVGDFAFLVAMFLVFQQLGSL----- 200 Query: 199 MAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS 258 + +L + L + L +G K+ P+ WLPDA + P+PVSAL+ Sbjct: 201 ---SFDVLLTEGPNLPEATLNWIVFLLFVGATGKSAQIPLFVWLPDAMA-GPTPVSALIH 256 Query: 259 -AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYS 317 A ++ L +L R ++ +G+ ++ I G + +AA + Q DIKR+LAYS Sbjct: 257 AATMVTSGLYLLARLSALV---LGAPVVMMIIAIVGAATALMAATIAIAQDDIKRVLAYS 313 Query: 318 SVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGT---------- 367 +V +G + + G+G F ++ H++ H+ K LF GSG+V+ Sbjct: 314 TVSQLGYMFMAAGVG---AFFVSIFHVITHAFFKACLFLGSGSVIHGMEEVEHGLEEQGR 370 Query: 368 -------RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH-- 418 +D+ + G+ + MP T + LA++G+P F S+ + + Sbjct: 371 DTSDFDPQDMRTMGGVGEYMPATRTTYLLATLAISGIPLTAGFFSKDEILFKAFEYGYDG 430 Query: 419 ----LLIIVLLLLLLTLVLAGLVRMAARVLMAKP----PQAVNRGDLGWLTTSPMVILLV 470 + + ++ ++ L ++R +P P ++ + T P+ L + Sbjct: 431 STYAMAVWIVGVVTAVLTAFYMMRSYMLTFEGEPRWPLPDQLSPHESPSTMTGPLWTLGI 490 Query: 471 MMLAMG-THIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSG 515 + L G +P + L + P ++ H +P Sbjct: 491 LSLVGGFIGLPAVIQGGDLNWIHHYLGAKYGGPVAEASVHGHVPLA 536 >UniRef50_P56752 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=1715 Tax=cellular organisms RepID=NU5C_ARATH Length = 746 Score = 320 bits (822), Expect = 7e-86, Method: Composition-based stats. Identities = 110/465 (23%), Positives = 207/465 (44%), Gaps = 41/465 (8%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVV---------- 54 ++ + L P+L + + R T L +++++I ++++ Sbjct: 10 IIPFIPLPVPILLGVGLLLFPTATKNLRRMWTFLSIFLLSIVMIFSIYLSIQQIFLSCIH 69 Query: 55 --QTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 + F+ ID L + ++ +G L IYS YM H+ + Sbjct: 70 QNVWSWTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGY-------- 121 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIII 171 ++ + F +ML +VTS+NLI ++ E + S L+G + R + A K + Sbjct: 122 LRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVT 181 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 VG L G + +Y S Q IF + +L ++ ++ + L L +G Sbjct: 182 NRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLIL--NNRVNLLFLTLCAFLLFVGPIA 239 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ FP+H WLPDA E P+P+SAL+ A ++ + ++ R + I ++ Sbjct: 240 KSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGIFLVARLLPLF---IVIPSIMYIIS 295 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 + G+++V + A L Q+DIKR LAYS++ +G + + LG+G +AL H++ H+ + Sbjct: 296 LIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYS 352 Query: 351 KTLLFCGSGNVLLKY---------GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFN 401 K LLF GSG+++ ++++ ++ G+ K +P T F G L+L G+PP Sbjct: 353 KALLFLGSGSIIHSMEAIVGYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLA 412 Query: 402 IFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA 446 F S+ + L + + ++ L + R+ Sbjct: 413 CFWSKDEILNDSLLFSP-IFAIIACSTAGLTAFYMFRIYLLTFEG 456 >UniRef50_B3Q7M3 Proton-translocating NADH-quinone oxidoreductase, chain L n=3 Tax=Rhodopseudomonas palustris RepID=B3Q7M3_RHOPT Length = 697 Score = 320 bits (821), Expect = 8e-86, Method: Composition-based stats. Identities = 111/418 (26%), Positives = 189/418 (45%), Gaps = 26/418 (6%) Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L +D L + L ++ + L +YSIGYM + ++G+ LF F ML++ Sbjct: 132 LRVDTLTAVMLVVVTTVSSLVHLYSIGYMHEDPHR--------PRFFGYLSLFTFAMLML 183 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVGVAFGLFGTVLVYA 188 VT++NL+ ++ E L+S L+G + Q+ S AA K ++ VG L G ++ Sbjct: 184 VTADNLLQLFFGWEGVGLASYLLIGFWYQKPSANAAAIKAFVVNRVGDFGFLLGIFTIFV 243 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLL--DPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 S + S K + + LA + L +G K+ F +H WLPDA Sbjct: 244 LVGSTDFDTIFSAAPSLTGKTINFFGWHADALTLACLMLFMGAMGKSAQFLLHTWLPDAM 303 Query: 247 SEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFIL 305 E P+PVSAL+ A ++ + ++ R + A + +++ FG + AA L Sbjct: 304 -EGPTPVSALIHAATMVTAGVFMVARMSPLFELAPNA---QAVVMFFGATTAFFAATIGL 359 Query: 306 VQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK- 364 VQ DIKR++AYS+ +G + V +G G + H+ H+ K LLF G+G+V+ Sbjct: 360 VQNDIKRIVAYSTCSQLGYMFVAMGAG---AYSVGMFHLFTHAFFKALLFLGAGSVIHAM 416 Query: 365 YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLI--- 421 + +D+ + G+ +PFT + G LAL G P + S+ I A + L Sbjct: 417 HHEQDIRNMGGLKDRIPFTYGVMLIGTLALTGFPLTAGYFSKDAIIEAAFVSKNPLAFYG 476 Query: 422 IVLLLLLLTLVLAGLVRMAARVLMAKP---PQAVNRGDLGWLTTSPMVILLVMMLAMG 476 ++ ++ L R+ + +P + + T P+ +L LA G Sbjct: 477 FLMTVVAALLTSFYSWRLVFKTFHGEPHDRKHYEAAHESPLVMTIPLFVLAFGALAAG 534 >UniRef50_Q21TA5 NADH dehydrogenase (Quinone) n=6 Tax=Bacteria RepID=Q21TA5_RHOFD Length = 484 Score = 320 bits (821), Expect = 8e-86, Method: Composition-based stats. Identities = 176/488 (36%), Positives = 270/488 (55%), Gaps = 9/488 (1%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAA 66 +L PLL + R S R + V+ SLG + A + G I Sbjct: 4 LFFVLGFPLLGGAVLALIGHR--SYARDINVVFSLG---TFLAACVLTAEIVADGPILVW 58 Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 ID L + + +G T I+S YMR E HG+++P + Y+ + LF FTM Sbjct: 59 HDQFFIDPLNVFLVTLTAFVGMTTAIFSRPYMRIEQDHGKMTPPRMRLYHSMYQLFSFTM 118 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLV 186 LL T+NNL ++W A+EA TL++ LV +Y +SLEAAWKY I+C VG+A LFGTVL+ Sbjct: 119 LLGFTTNNLGILWVAMEAATLTTVLLVSVYRTAASLEAAWKYFILCGVGIAQALFGTVLL 178 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 Y A V+ + W+ + LDP+++ LAF FLLIG+GTK G+ P+H+WLPDAH Sbjct: 179 YMAAEKVLGPEGATLLWTNLDAIKDQLDPSIITLAFAFLLIGYGTKVGMVPLHSWLPDAH 238 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILV 306 +E P+PVSA+LS +LLN A+ L+R ++ A+ +L++ FG+LSV VA FF+ Sbjct: 239 AEGPTPVSAVLSGLLLNVAMYALLRCKVLTDGALMRPLAGQLMMGFGLLSVVVATFFLSR 298 Query: 307 QRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG 366 Q+D+KR+ +YSS+E+MGL+ G+GGP+ FA LLH+ HSL K+ +F G+ K G Sbjct: 299 QKDVKRMFSYSSIEHMGLITFAFGMGGPVANFAGLLHMTVHSLIKSAIFFAVGHATQKAG 358 Query: 367 TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLL 426 T+ ++ + G++K+ P G +A+ GMPPF +F SEF+ +T + L + Sbjct: 359 TQIMSEIRGLIKVNPTIGWGLILGVMAILGMPPFGVFASEFLILTTAMREQPWAAPFLFV 418 Query: 427 LLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRI 486 L + ++R+ V +A+ P+ + L + L +G +IP + Sbjct: 419 SLGVAFASMMIRVLPMVFGETSLKALPHPPA----LVPVFVHLSLGLVLGLYIPPYLNTW 474 Query: 487 LAGASTIV 494 A+ ++ Sbjct: 475 YVQAARML 482 >UniRef50_B2ULN9 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2ULN9_AKKM8 Length = 610 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 123/482 (25%), Positives = 217/482 (45%), Gaps = 33/482 (6%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE----- 62 LLL PL+ + + +R + L T +L L L + Sbjct: 10 WLLLFLPLVVAAFDWFLLTKRPDVAALTSTFSCLA-TFVLSLGLLDRTGSDSFSWLPISD 68 Query: 63 IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 I + L +D L + ++ IG L ++S+GYM + A Y+ LF Sbjct: 69 ISSVDLGFVLDPLSSRMMLVVTGIGLLVHVFSLGYMADDKAK--------TRYFACLSLF 120 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFGLF 181 +F+M +V +NN+ + + E LSS L+G + R + AA K I VG L Sbjct: 121 MFSMTGIVLANNIAMTFIFWELVGLSSYLLIGHWYTRDTAANAAKKAFICNRVGDFGFLI 180 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 G + ++A ++ +++ + + L+ + + L G K+ FP+H W Sbjct: 181 GILTLWALTNTLDF---------SLMEIPAGISENLLNITVLCLFCGAVGKSAQFPLHVW 231 Query: 242 LPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 LPDA E P+PVSAL+ A ++ + +++R I ++ G ++ +A Sbjct: 232 LPDAM-EGPTPVSALIHAATMVAAGVYMMVRVQYSIGIEAFPALACNVIAGIGAITAVIA 290 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 AF Q DIKR+LAYS++ +G + + LG+ L AA+ H+ H+ K LLF G+G Sbjct: 291 AFMATQQNDIKRVLAYSTLSQLGYMVMALGL---LAGEAAMFHLFTHAWFKALLFLGAGA 347 Query: 361 VLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 ++ + +D+ + G++K M T++ F +AL +P + F S+ + A L +N + Sbjct: 348 IIFACHHEQDIWKMGGIMKRMKLTSLTFIIATMALIAIPFTSGFFSKEAILEAALRKNPV 407 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA--VNRGDLGWLTTSPMVILLVMMLAMGT 477 + + L L ++R+ V K + ++G L P++IL V+ L G Sbjct: 408 FFWIGAGVAL-LTTFYMMRVIFVVFFGKSRSHSSEHASEVGGLMLVPLLILAVLALISGY 466 Query: 478 HI 479 Sbjct: 467 GF 468 >UniRef50_Q85FH9 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=8 Tax=Euphyllophyta RepID=NU5C_ADICA Length = 729 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 119/466 (25%), Positives = 198/466 (42%), Gaps = 45/466 (9%) Query: 8 ALLLLTPLLFSL----LCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI 63 ++ L PL+ S L F + R +L+ + + + ++L + Q I Sbjct: 9 WIIPLCPLIASCCTGSLSFFFPRVARGFHRLCALLNVFSLAISMFVSLAIFQEQFVKNPI 68 Query: 64 ------------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 F + +D L + ++ +G L IYS YM ++ + Sbjct: 69 QQYLWIWIPRSTFCVEIGFLVDSLTLVMSLLVTTVGVLVMIYSDSYMCYDRGY------- 121 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAA-WKYII 170 +Y + LF +ML +V S NLI ++ E + S LVG + RSS A K + Sbjct: 122 -TRFYAYLSLFTASMLGLVLSPNLIQLYVFWELVGMCSYLLVGFWFARSSAANACQKAFV 180 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 +G L G + +Y S F LK+ +P L + LL G Sbjct: 181 TNRIGDFGLLLGILGIYWTTGSFEISELCDRFAK--LKEIGFSNPILTNIIAFLLLAGPV 238 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ FP+H WLPDA E P+P+SAL+ A ++ + + R Y +I + L Sbjct: 239 AKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGIFFIARIYGLISTLPLVMQASSWL 297 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 + + A L QRD+K+ LAYS++ +G + + LGIG +AL H++ H+ Sbjct: 298 GGA---TALLGATLALAQRDLKKGLAYSTMSQLGYMVLALGIG---AYQSALFHLVTHAY 351 Query: 350 AKTLLFCGSGNVLLKYG---------TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 +K LLF G+G+V+ ++++ + G+ K MP T F G L+L+G+PP Sbjct: 352 SKALLFLGAGSVIHSIEKVVGYSPNRSQNMFFMGGLRKYMPITGTTFLLGTLSLSGIPPL 411 Query: 401 NIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA 446 F S+ I + L + +L L + R+ Sbjct: 412 ACFWSKDEIIHESWLSS-LPLGILASGTAGLTAFYMFRIYLLTFEG 456 >UniRef50_B1NWJ6 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=3586 Tax=root RepID=NU5C_MANES Length = 752 Score = 319 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 113/465 (24%), Positives = 206/465 (44%), Gaps = 41/465 (8%) Query: 5 VMFALLLLTPLL--FSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL----------W 52 ++ + L P+L LL F ++L + L I ++ + L + Sbjct: 10 IIPFVTLPVPMLIGAGLLLFPAATKKLRRMWAFPSVFLLSIVMIFSIDLSIQQINSSFIY 69 Query: 53 VVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 + F+ ID L + ++ +G L YS YM H+ + Sbjct: 70 QYIWSWTINNDFSLEFGHLIDPLTSILSVLITTVGILVLFYSDNYMSHDQGY-------- 121 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIII 171 ++ + F +ML +VTS+NLI ++ E + S L+G + R + A K + Sbjct: 122 LRFFAYMSFFTTSMLGLVTSSNLIQIYIFWELVGVCSYLLIGFWFTRPIASNACQKAFVT 181 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 VG L G + +Y S + IF + + ++ ++ + L V L G Sbjct: 182 NRVGDFGLLLGILGLYWITGSFEFRDLFKIFNNLI--YNNQVNFLFVTLCAVLLFSGAIA 239 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ FP+H WLPDA E P+P+SAL+ A ++ + ++ R + + + F L+ Sbjct: 240 KSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGIFLVARLFPLF---VIIPFIMNLIA 295 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 + G+++V + A L Q+DIKR LAYS++ +G + + LG+G AAL H++ H+ + Sbjct: 296 LIGIITVFLGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYS 352 Query: 351 KTLLFCGSGNVLLKY---------GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFN 401 K LLF GSG+++ ++++ ++ G+ K +P T F G L+L G+PPF Sbjct: 353 KALLFLGSGSIIHSMEAILGYSPDKSQNMVLMGGLTKHIPITKTAFLLGTLSLCGIPPFA 412 Query: 402 IFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA 446 F S+ + + + ++ L + R+ Sbjct: 413 CFWSKDEILNDSWLYSP-IFAIIACFTAGLTAFYMFRVYLLTFDG 456 >UniRef50_Q5FC98 NADH-quinone oxidoreductase chain L n=18 Tax=Rickettsiales RepID=Q5FC98_EHRRW Length = 641 Score = 318 bits (816), Expect = 3e-85, Method: Composition-based stats. Identities = 119/484 (24%), Positives = 213/484 (44%), Gaps = 27/484 (5%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI-- 63 + L +L PL+ S+ R + V + S + + + D Sbjct: 23 IELLCVLLPLIGSVFANIISHRFFAQLCAVFFITSSSLLSWYLFFNFQNSYIIDLFSWIQ 82 Query: 64 ---FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 L++D L + L I+ + + IYSIGYM H+V + + Sbjct: 83 VYDLKIHWSLYLDSLSIIMLVIVNTVSVVVHIYSIGYMSHDVG--------AARFLSYLS 134 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVGVAFG 179 LF F ML++VTS N + ++ E L S L+G + ++SS +AA K II VG F Sbjct: 135 LFTFFMLILVTSGNFLQLFLGWEGVGLCSYLLIGFWFEKSSATKAAMKAFIINRVGDFFF 194 Query: 180 LFGTVLVYANAASVMP----QAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGL 235 + G + V+ S+ + + + + + + V L IG K+ Sbjct: 195 ILGIIAVFLVFDSLDFARVFHSIVNSDYRIGIINFFGYQVPYIDVICVLLFIGCMGKSAQ 254 Query: 236 FPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 +H WLPDA E P+P SAL+ A ++ + +++R + SD +LI G Sbjct: 255 IGLHTWLPDAM-EGPTPASALIHAATMVTAGVFLVVRCSPLFE---LSDVARHFILIVGT 310 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLL 354 ++ AA +VQ D+K+++AYS+ +G + + G+ A+ H++ H+ K LL Sbjct: 311 ITCLFAATIAIVQTDLKKIIAYSTCSQLGYMFLACGLS---AYSVAIFHLMTHAFFKALL 367 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 F +GN++ +D+ + + +PFT VL G+LALAG+ PF F S+ + I + Sbjct: 368 FLCAGNIIHSTHEQDIYKIRASWRQIPFTYVLTWIGSLALAGIFPFAGFYSKDLIIESSY 427 Query: 415 ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLA 474 ++ ++ ++ L R+ V + + + G + P+++L V + Sbjct: 428 NVSNT-AFIISNIVAFLTAFYSWRLIIIVFHGIDSEKKSIFESGKVMLLPLLVLSVGSIF 486 Query: 475 MGTH 478 G Sbjct: 487 SGMW 490 >UniRef50_Q6GBK7 Putative antiporter subunit mnhA2 n=63 Tax=Staphylococcus RepID=MNHA2_STAAS Length = 800 Score = 318 bits (816), Expect = 3e-85, Method: Composition-based stats. Identities = 131/544 (24%), Positives = 238/544 (43%), Gaps = 56/544 (10%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLIL-------ALWVVQTAA 58 + LL+ ++ +++ ++R L+ L + I+ + L L + T+ Sbjct: 3 LVYLLIAILVIMAMILLMSKRRALAKYAGYIALVAPVISSIYFLIQIPSVAKLQYLSTSI 62 Query: 59 DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 + L L +DGL +F I+ +IG Y+ Y+ + L +Y + Sbjct: 63 PWIKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDN-------LPRFYFY 115 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYIIICTVGVA 177 LF+F+M+ +V S+N I+M+ E T++SS L+ + S A + +I G Sbjct: 116 LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAMQSFMITVFGGL 175 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L G +++Y + + + + + L + L+G TK+ FP Sbjct: 176 ALLVGFIMLYIMTGTNNITEILG-------QADHIKNHGLFIPMIFMFLLGAFTKSAQFP 228 Query: 238 MHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 H WLP A + AP+PVSA L SA ++ + +L+R+ ++ S+ ++ G+++ Sbjct: 229 FHIWLPRAMA-APTPVSAYLHSATMVKAGIFLLLRFTPLLG---LSNMYVYIVTFVGLIT 284 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLG--------------IFAALL 342 + + L Q D+K +LAYS++ +G++ +GIGG +F AL Sbjct: 285 MLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHQQDAIASIYVFVLFGALF 344 Query: 343 HILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNI 402 H++NH++ K LF G G + + G+RD+ ++ GM ++ P ++ AL++AG+P N Sbjct: 345 HLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNG 404 Query: 403 FLSEFMTITAGLARNHL---------LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV- 452 FLS+ M + A L I+ + ++ + M V K V Sbjct: 405 FLSKEMFLDALTQTGQLSQFSLISMIAIVFVGVIASVFTFTYALYMVKEVFWTKYDSKVF 464 Query: 453 --NRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTH---DLPAQRST 507 WL + P +IL+V++ + I+ A V G H L S Sbjct: 465 TKKNIHEPWLFSLPSLILMVLVPVIFFVPNIFGKGIIVLALRAVSGGNHQIDQLAPHVSQ 524 Query: 508 WHDF 511 WH F Sbjct: 525 WHGF 528 >UniRef50_UPI0001C3127D proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3127D Length = 671 Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats. Identities = 102/482 (21%), Positives = 205/482 (42%), Gaps = 38/482 (7%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVV------ 54 MS + L+L PL +++ KR ++ + + + + Sbjct: 1 MSTTTWGWLVLAFPLAGTIIIGLGHKRLARGPAGAIGTLAILLAFVSAVGALLSLQDRDE 60 Query: 55 ---QTAADAGEIFAAG-----LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGE 106 Q + + G L + +D L + ++ + L +YS+ YM+ + + Sbjct: 61 HHRQLVSSLWDYAVTGSIDARLSILVDPLSVFMMLVITGVSTLIHLYSVSYMKSDRGN-- 118 Query: 107 LSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAA 165 Y+ + + F+F+ML++V + N +++ +S L+ + +R + +A Sbjct: 119 ------ARYFAYLNFFVFSMLVLVLAANFLLLIVGWAFVGAASYLLISFWYRRETATKAG 172 Query: 166 WKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFL 225 K +I VG + GT + + ++ + + ++ + L Sbjct: 173 IKAFVINVVGDVGLVLGTFFILRHTGTLDFLGTFEAVENGAFDSHN----GALVAGCLLL 228 Query: 226 LIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDF 284 L+G K+ P H WLPDA E P+PVS+L+ A ++ + ++ R + + A + Sbjct: 229 LVGAFAKSAQVPFHTWLPDAM-EGPTPVSSLIHAATMVTAGVYLISRMFPLFEAAPAAAD 287 Query: 285 PNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHI 344 ++ ++ +A L Q DIKR++AYS++ +G + + + G A L H+ Sbjct: 288 VGAVVG---CATLLIAGTIALTQTDIKRVIAYSTMSQIGYMIMGVSAG---AYAAGLFHL 341 Query: 345 LNHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 L H+ K LLF +G+++ G + L+ + G + MPFT F G LAL+G+PPF+ F Sbjct: 342 LTHAFFKALLFMAAGSIIGAMAGAQSLDKMSGFKRSMPFTFGCFVVGGLALSGVPPFSGF 401 Query: 404 LSEFMTITAGLARNHLLIIVLLL--LLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLT 461 S+ + R ++ ++ + L RM R + +P + G + Sbjct: 402 FSKDEILAFVGHRGGWFSVMYVVGYIGAFLTGIYTWRMIFRAFLGRPSPEAAELEHGHIA 461 Query: 462 TS 463 + Sbjct: 462 HA 463 >UniRef50_B6YWP6 Hydrogenase 4, subunit 3 n=3 Tax=Thermococcus RepID=B6YWP6_THEON Length = 634 Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats. Identities = 141/496 (28%), Positives = 224/496 (45%), Gaps = 26/496 (5%) Query: 17 FSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLG 76 ++L + T+ +G+ + L + ++ +D+ + L L +D L Sbjct: 24 SAILTKLVNALSALGSLTIAYAGIVGLKESVELNITLLHLKSDSIINAFSTLTLKVDPLS 83 Query: 77 GLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLI 136 G F+ ILG++GF T +Y I Y+ L Y + LFL M LV+ S NL+ Sbjct: 84 GFFMIILGILGFCTSVYGIAYLDMYKGDKRL-------YAFNYPLFLLFMFLVLVSWNLL 136 Query: 137 VMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQ 196 E TL S FLV +L A KY + F L VLV + Sbjct: 137 WFVVFWELMTLFSQFLVAFERNEKTLIATLKYFCMTKAAADFMLIAIVLVLITISGGGDY 196 Query: 197 AEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSAL 256 ++ + P M L +IG G K L P H WLPDA+ EAPS VS+L Sbjct: 197 DILSSQLVNYFRS----HPLEMYLVSAGFMIGLGVKAALVPFHVWLPDAYVEAPSNVSSL 252 Query: 257 LSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAY 316 LS + + ++ R+++ + L+ +FG L++ + L Q D KRLLAY Sbjct: 253 LSGAMEKMPVYMMFRFFLSFTPL--TPNIGLLIALFGTLTLFFGTMYALKQTDSKRLLAY 310 Query: 317 SSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY 365 SV +G V LG G G L + A+L H LNH+ K LLF +G++L + Sbjct: 311 HSVGQIGYVVFALGAGIYLLSKGYTTFGALALMASLFHALNHAFFKGLLFLTAGSILYRT 370 Query: 366 GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL--LIIV 423 G+RDL+ + G+ + MP TA G+L++AGMPPFN F+S++M + L L L Sbjct: 371 GSRDLDHLGGLARFMPITAFAALIGSLSIAGMPPFNGFVSKWMIYVSTLPTPTLVSLFGA 430 Query: 424 LLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPV 483 L L + + A V+ + + P + + ++ + +IL V+ + G + P+ Sbjct: 431 LALFISAVTTASFVKYFTSIFVRPPAKEITVKEVPVSMWASQLILAVLCVIFGVYPALPL 490 Query: 484 IRILAGASTIVLSGTH 499 I ++ ++ Sbjct: 491 EAISKAVDSVGVTTPS 506 >UniRef50_C5QQQ5 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=2 Tax=Staphylococcus RepID=C5QQQ5_STAEP Length = 816 Score = 317 bits (813), Expect = 6e-85, Method: Composition-based stats. Identities = 137/548 (25%), Positives = 250/548 (45%), Gaps = 55/548 (10%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA------ 60 + +L PL+F+L+ + VL + + ++L + + + Sbjct: 19 LHIAVLLPLIFALIIPILYRFVKRIHLGWFVLPVPIVLFIYFISLISITMSGNTVMKTLN 78 Query: 61 -GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 F L++DGLG LF ++ IG L +YSIGY+ L ++Y + Sbjct: 79 WMPHFGMNFNLYVDGLGLLFSLLITGIGSLVVLYSIGYLSKSEQ--------LGNFYCYL 130 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVAF 178 LF+ ML VV S+NLI+++ E T+ SS L+ + ++ + + A K +I+ +G Sbjct: 131 LLFMGAMLGVVLSDNLIILYLFWELTSFSSFLLISFWREKKASIYGAQKSLILTVLGGLS 190 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 L G +L+ A + Q + + K S + + +LA + ++IG TK+ P Sbjct: 191 LLGGIILLSLAADTFSIQ-------TMIEKASEIQNSPYFILAMILVMIGAFTKSAQVPF 243 Query: 239 HAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSV 297 + WLPDA EAP+PVSA L SA ++ L ++ R I + G + + G++++ Sbjct: 244 YIWLPDAM-EAPTPVSAYLHSATMVKAGLYLVARMTPIFAISEG---WVWTITLVGLITL 299 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGP-------------LGIFAALLHI 344 A+ Q+D+K +LA+S+V +G++ LGIG G AA+ H+ Sbjct: 300 FWASLNATKQQDLKGILAFSTVSQLGMIMSMLGIGAVSYHYQGADSQLYVAGFVAAIFHL 359 Query: 345 LNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 +NH+ K LF +G V GTR++ + G+L IMP + + AL++AG+PPFN FL Sbjct: 360 INHATFKGALFMITGGVDHATGTRNVKKLGGLLTIMPISFTMTIITALSMAGVPPFNGFL 419 Query: 405 SEFMTITAGLARNH----------LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV-- 452 S+ + A + H ++ ++ ++ ++ + K Sbjct: 420 SKEKFLEAMIDVTHADLMSLNTLGIIFPIIAIVGSIFTFVYSIKFIMHIFFGKYKPDSLP 479 Query: 453 -NRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDF 511 + + L +IL ++++ G I+ A+ V S T + A+ +H Sbjct: 480 KSAHESSMLMLLSPIILTILVVVFGLFPSILTQSIIEPATQAV-SQTTGITAEFHLFHGI 538 Query: 512 LPSGTASV 519 P+ +++ Sbjct: 539 TPAFISTL 546 >UniRef50_Q9K1B0 NADH-quinone oxidoreductase subunit L n=127 Tax=Proteobacteria RepID=NUOL_NEIMB Length = 674 Score = 317 bits (813), Expect = 8e-85, Method: Composition-based stats. Identities = 126/526 (23%), Positives = 221/526 (42%), Gaps = 56/526 (10%) Query: 1 MSYSVMFALLLLTPLLFSLLC-FACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAAD 59 M+ ++ ++ L PL SL+ K + TVT+L +L LW + Sbjct: 1 MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVSAVLSAYVLWGFIDGSR 60 Query: 60 AGEIFAAGLWLH-----------IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 A WL +D + + + ++ + + IY+IGYM E Sbjct: 61 AKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMVHIYTIGYMHDEK------ 114 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWK 167 V ++ + LF F+ML+++ SNN I ++ EA L S L+G Y +R S A K Sbjct: 115 -VGYQRFFSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGFYFKRPSATFANLK 173 Query: 168 YIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPT----LMLLAFV 223 +I VG L G LV A + ++ + V + L P L+ + + Sbjct: 174 AFLINRVGDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQNATIQLFPGVEWSLITVTCL 233 Query: 224 FLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGS 282 L +G K+ FP+H WLPD+ E P+P+SAL+ A ++ L ++ R I S Sbjct: 234 LLFVGAMGKSAQFPLHVWLPDSM-EGPTPISALIHAATMVTAGLFMVSRMSPIYEM---S 289 Query: 283 DFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALL 342 ++++ G ++ F ++Q DIKR++AYS++ +G + V LG A+ Sbjct: 290 STALSVIMVIGAITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTVALGAS---AYSVAMF 346 Query: 343 HILNHSLAKTLLFCGSG-NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFN 401 H++ H+ K LLF +G ++ + +D+ + + K MP T + G L+L G P F+ Sbjct: 347 HVMTHAFFKALLFLAAGSAIIGMHHDQDMRHMGNLKKYMPVTWLTMLIGNLSLIGTPFFS 406 Query: 402 IFLSEFMTITAGLAR---NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP--------- 449 F S+ I A +L + + R V + Sbjct: 407 GFYSKDSIIEAAKYSTLPGSGFAYFAVLASVFVTAFYAFRQYFMVFHGEEKWRSLPEHHS 466 Query: 450 -----------QAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVI 484 + N + + T P+++L V + +G +P++ Sbjct: 467 DGHGEEHHGLGKNDNPHESPLVVTLPLILLAVPSVIIGYIAIEPML 512 >UniRef50_A3ERI6 NADH dehydrogenase (Quinone), chain L n=8 Tax=cellular organisms RepID=A3ERI6_9BACT Length = 639 Score = 317 bits (812), Expect = 8e-85, Method: Composition-based stats. Identities = 118/498 (23%), Positives = 209/498 (41%), Gaps = 42/498 (8%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI--- 63 L+ L PL+ L+ VTV +L I A + Sbjct: 4 IVLIPLLPLIGFLIVGLFWPYFKGKGHWVTVPLVALSAVLSIRAFMDTLNGPPIHFVLYN 63 Query: 64 ------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 F+ + + ID L L ++ V+ L +Y++GYM+ + + ++ Sbjct: 64 WIHSGHFSVPISIMIDHLTAAMLVMVTVVSTLVHLYTVGYMKEDSGYD--------RFFS 115 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGV 176 + LF F M++++ S+NL+ ++ E S L+ + +R S AA K I+ +G Sbjct: 116 YISLFTFAMIVLLLSDNLLELFFGWEGVGFCSYILIVHWYERRPSWMAANKAFIMNRIGD 175 Query: 177 AFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQ-------SSLLDPTLMLLAFVFLLIGF 229 L G L Y ++ + S + S +++ + + L +G Sbjct: 176 FGFLLGIFLTYNVFGTLDYEGIFRAIPSHLHDTIFPFSVFHSTESASVLTVIALLLFVGA 235 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRL 288 K+ P+H WLPDA E P+P+SAL+ A ++ + ++ R I S + Sbjct: 236 VGKSAQIPLHPWLPDAM-EGPTPISALIHAATMVTAGIFMIARLSPIYN---ASPTALMV 291 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 + G ++ VAA L QRDIK+++AYS++ +G + + G+G A + H+L H Sbjct: 292 VGWTGAITAFVAATIALTQRDIKKIVAYSTMSQLGYMVMACGVG---AYGAGIFHLLTHG 348 Query: 349 LAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 K LLF +G+V+ G +D+ + G+ K M T V G+LAL+G+PPF + S+ Sbjct: 349 FFKALLFLAAGSVIHSLNGEQDIFRMGGLSKYMKLTFVTMLLGSLALSGIPPFAGYFSKD 408 Query: 408 MTITAGLARNH--LLIIVLLLLLLTLVLAGLVRMAARVLMAKP------PQAVNRGDLGW 459 + ++ + + L+ L R+ V K + Sbjct: 409 LILSDAFQSGPRGQIFWAIGLITAVLTAFYTFRLIFMVFTGKENFSNDGHHGHAPHESPL 468 Query: 460 LTTSPMVILLVMMLAMGT 477 + T P+VIL + G Sbjct: 469 VMTIPLVILSFGAVFAGW 486 >UniRef50_B0SFU4 NADH dehydrogenase (Ubiquinone), M chain n=6 Tax=Leptospira RepID=B0SFU4_LEPBA Length = 579 Score = 317 bits (812), Expect = 9e-85, Method: Composition-based stats. Identities = 120/524 (22%), Positives = 222/524 (42%), Gaps = 40/524 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 + ++++ P++ + L ++R+ A ++ L S T +L L L+ A+ AG F Sbjct: 5 ILSIIIFLPIVSTFLIVI--QKRVGAVVVISALSS-AFTTILSLGLFFFYDASKAGLQFV 61 Query: 66 AGL-------------WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 + + +DG+ L A+ + FL+ I S P + Sbjct: 62 HWIPDWILSGKLSVDYHVGLDGVSLLLFALTTFMFFLSSIASWS----------NIPKKI 111 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIIC 172 +++ + +L V S NL++ + E L ++GI+G +AA KY + Sbjct: 112 KEFHICLLVLETAVLGVFASGNLVLFYVFWELMVLPMVLMIGIWGGEERTKAALKYFLFS 171 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTK 232 G F L G + +Y + S +L L F + F K Sbjct: 172 MAGSLFMLGGILTLYFKTGKTSIE-------SLSTASLALYSEPLQWFLFFSFFLAFAIK 224 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 LFP H W+PD H++AP+ S L+ VLL IR+ I S + I Sbjct: 225 IPLFPFHTWMPDVHTQAPTVGSVDLAGVLLKIGAYGFIRFCIPFFPE-QSLLSQNGIQIL 283 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 ++ + + LVQ DIKR++AYSS+ ++G + + G+ +L +++H ++ Sbjct: 284 AVIGIVYGSMAALVQTDIKRIIAYSSLSHLGFCILGIFSFTTEGVVGGMLQMVSHGISTG 343 Query: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 ++F G + + TR+++ G+ MP + F L+ G+P N F+ EF+ + Sbjct: 344 MIFLMIGMIYERAHTRNISEFGGLAGQMPVFSTFFLIAVLSSIGLPGTNGFVGEFLILIG 403 Query: 413 GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA--KPPQAVNRGDLGWLTTSPMVILLV 470 + N + + + + L L+ R L K QA DL + + L+V Sbjct: 404 AIKSN-VWLGGIAATGVVLGALYLLWFVKRFLFGVSKTIQAKPYKDLSFREIGILSPLVV 462 Query: 471 MMLAMGTHIPQPVIRILAGASTIVLSGTH--DLPAQRSTWHDFL 512 ++ +G + P+P + IL +S + L+ + ++ DFL Sbjct: 463 LIFWIGLY-PKPFLSILNSSSNVFLNSASVVTIEERKHIQKDFL 505 >UniRef50_A9B485 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=Chloroflexi (class) RepID=A9B485_HERA2 Length = 736 Score = 317 bits (812), Expect = 9e-85, Method: Composition-based stats. Identities = 120/470 (25%), Positives = 198/470 (42%), Gaps = 59/470 (12%) Query: 54 VQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 A D F G +DG L LA++ + + ++S+GYM H+ Sbjct: 100 FAWAPDGSGFFKFG--YRLDGATVLMLAMVTLAAWCIHLFSVGYMAHDEF--PTGHQRQS 155 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAWKYIIIC 172 ++ + LF +ML + ++NL++ + E L S L+G + + S+ EAA K I Sbjct: 156 RFFSYIALFTASMLGMTLADNLLLFFICWELMGLCSFLLIGFWFFKPSAREAAKKAFITT 215 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAIFWS----EVLKQSSLLDPTL--MLLAFVFLL 226 +G + G + +Y A S+ E ++ E +K ++ L P + L + Sbjct: 216 RIGDVGMMLGMMYIYNKAGSLTFGHEPGQIYNGEFLESIKTATSLIPGISAASLMAGLVF 275 Query: 227 IGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFP 285 +G K+ FP+H WLPDA E P+PVSAL+ A ++ + ++IR + I Sbjct: 276 LGTVGKSAQFPLHVWLPDAM-EGPTPVSALIHAATMVAAGVFLVIRTFPIF----AVSEV 330 Query: 286 NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 ++ G + AA + Q DIKR+LA+S++ +G + LGIG AAL H+L Sbjct: 331 LPVVAFIGAFTALFAALIAVAQYDIKRILAFSTLSQLGFMVAALGIG---AWVAALFHLL 387 Query: 346 NHSLAKTLLFCGSGNVLLKY---------GTRDLNVVCGMLKIMPFTAVLFGGGALALAG 396 H+ K LLF GSG+V+ +D+ + + K MP T + + G AL G Sbjct: 388 THAFFKALLFLGSGSVIHGMEATVGHDPDKAQDIRNMGTLRKFMPITFLTYMAGFFALIG 447 Query: 397 MPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR-- 454 +PPF F S+ I +H ++ +L L + R V K R Sbjct: 448 IPPFAGFWSKDEIILDAFLHHHYVVYGVLTAAAFLTAFYMTRQIVVVFFGKFRGYEPRKL 507 Query: 455 ----------------------------GDLGWLTTSPMVILLVMMLAMG 476 + T P++IL + + G Sbjct: 508 AHAAAHGHDDHGHGDHDDHHHHHEAHDPHESPRSMTIPLIILSLFAVFAG 557 >UniRef50_A1ZLY6 NAD(P)H-quinone oxidoreductase chain 5 (NAD(P)Hdehydrogenase I, chain 5) n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZLY6_9SPHI Length = 702 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 118/500 (23%), Positives = 217/500 (43%), Gaps = 61/500 (12%) Query: 14 PLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA---GEIFAAG--- 67 P + L+ +K+ L T+L I+ W V F+ G Sbjct: 12 PFINFLVLLTGQKKIKRGGGHFATAVLLVTTVLAIVTAWQVLGGQPLYIDIYWFSLGTRS 71 Query: 68 --LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFT 125 + L+ID L L + ++ ++ L ++S+ YM+ + + Y+ + LF F+ Sbjct: 72 FKVDLYIDNLSALMMIVVTLVSALVHMFSLEYMKTDKNYN--------RYFAYLGLFTFS 123 Query: 126 MLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVGVAFGLFGTV 184 ML ++ +NL++++ E +SS L+G + ++ S A+ K ++ +G L G + Sbjct: 124 MLGIIIFHNLLIIYIFWELVGVSSYLLIGFWYEKKSATRASQKAFLVNRIGDVGFLAGIL 183 Query: 185 LVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 LV+ + + Q + L ++L+ + L G K+ FP+ WLPD Sbjct: 184 LVFNYFG------DFNLLSIAQSPQFASLSVGVLLIIGLCLFCGAVGKSAQFPLQVWLPD 237 Query: 245 AHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFF 303 A E P+PVSAL+ A ++ + +L R + ++ S ++ G ++ + AF Sbjct: 238 AM-EGPTPVSALIHAATMVAAGVYLLARIFFLLNLEALS-----VIATIGCITAFIGAFS 291 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLL 363 L Q DIK++LAYS++ +G + + +G+G A+LLH+L H+ K LF +G V+ Sbjct: 292 ALAQSDIKKVLAYSTISQLGYMVMGMGVG---AYEASLLHLLTHAFFKACLFLCAGAVIH 348 Query: 364 KYG-----------TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 +++ ++ G+ K MPFT + + A ALAG+P F+ FLS+ ++ Sbjct: 349 SMHQLEHKLNIHFDAQNMYLMGGLRKAMPFTFMCYVLSAAALAGLPFFSGFLSKDAILSG 408 Query: 413 GLARN-------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----------QAVNRG 455 LA L+ + L L + R V Sbjct: 409 SLAWASFKGGGVWYLLPLFGFLSAFLTAFYMGRQLFLVFFGHLELEKVFEEAKGALAKVK 468 Query: 456 DLGWLTTSPMVILLVMMLAM 475 D+ P+ +L + L + Sbjct: 469 DVPLQMKIPLGVLALGALWL 488 >UniRef50_D0XMF8 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteobacteria RepID=D0XMF8_9CAUL Length = 992 Score = 315 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 132/519 (25%), Positives = 226/519 (43%), Gaps = 38/519 (7%) Query: 20 LCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGL----------W 69 + + R + L + +TL ++ L A AGE+ A + Sbjct: 48 IGALAPALAIRRGRNASALAAGAVTLAALVILGSFAPAVLAGEVVQARIDWIPLLGLNLN 107 Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L +D LG +F ++ IG L +Y+ Y+ G ++ + LF M + Sbjct: 108 LFLDALGLMFAGMILGIGLLVIVYARFYLAKADPMG--------RFFVYLLLFQGAMTGI 159 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 V S+N++++ E T+LSS L+G + + A + + G + G +++ Sbjct: 160 VLSDNVLLLLIFWELTSLSSFLLIGFWRHLPEGRQGARMALAVTGAGGLSLIGGLLILGN 219 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 A S + + ++ L L A + +L G TK+ FP H WLP A + Sbjct: 220 IAGSYDLTVILQ-------NREAIQASPLYLPALLLILGGCFTKSAQFPFHFWLPHAMA- 271 Query: 249 APSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQ 307 AP+PVSA L SA ++ + +L R + ++ G+ L+ G++++ AA L + Sbjct: 272 APTPVSAYLHSATMVKAGIFMLARLWPVL---SGTGEWFYLVATTGLVTMVFAAVVALFK 328 Query: 308 RDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGT 367 D+K LLAYS++ ++G + + G G P+ + HILNH+ K LF +G V + GT Sbjct: 329 DDLKGLLAYSTISHLGFLTMLFGFGTPMAAVVGVFHILNHATFKAALFMNAGIVDHEAGT 388 Query: 368 RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG----LARNHLLIIV 423 RD+ + G+ +MP A L L++AG+PP N F+S+ M + L+ Sbjct: 389 RDIKRLGGLATLMPIAATLAVVAGLSMAGIPPLNGFISKEMMLEEASHTVWWSQPWLVPA 448 Query: 424 LLLLLLTLVLAGLVRMAARVLMAKPPQAVNR--GDLGWLTTSPMVILLVMMLAMGTHIPQ 481 L L T +A R V + D G P +L+ +++A+G P Sbjct: 449 LATLGATFSVAYSFRYIVHVYFGTTRTDYPKTPHDPGIGLWGPPAVLVGLVVAIGL-FPA 507 Query: 482 PVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVS 520 V L A + + G S WH P+ S++ Sbjct: 508 VVAGPLVEAVSRAVIGGETPYYSLSLWHGVTPALFMSLA 546 >UniRef50_A1RWL5 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL5_THEPD Length = 491 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 168/487 (34%), Positives = 267/487 (54%), Gaps = 2/487 (0%) Query: 11 LLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWL 70 L L + LC + L R +L + LL ++ ++ + + G Sbjct: 4 YLLVLFAAPLCASAFTALLRNARVGEILTVVSTLLLSAVSCLLMVETSTGRKFLLLGDEF 63 Query: 71 HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVV 130 +D L L L ++ + + +YS Y+ +EV G ++ + +Y + F+FTM+LVV Sbjct: 64 IVDSLTSLMLVVISFVSLMVSLYSPKYLAYEVERGVVAREKVVLFYVLLNAFIFTMILVV 123 Query: 131 TSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANA 190 T+NN+ +MW A+EATT+++A LV Y ++EA+WKYII+C+ G+AFGL+G V +Y A Sbjct: 124 TTNNIAIMWVALEATTIATAHLVATYRTAEAIEASWKYIILCSTGIAFGLYGVVTLYYTA 183 Query: 191 ASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAP 250 A + + T++ +AF L+GFGTK GL P H WLPD +SEAP Sbjct: 184 YLAGIPAPLLWTSLVDHAKMLEAHSTMVKIAFTLALVGFGTKAGLAPFHTWLPDTYSEAP 243 Query: 251 SPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDI 310 VSALL+++L CA+ L+R+Y + A F +LL+ G+ S+ +++ +L D+ Sbjct: 244 PYVSALLASILEGCAIYTLVRFYSVSVLAGVGAFAQTVLLVVGIASLFISSLHMLAVTDV 303 Query: 311 KRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDL 370 RL A SSVE+MG++A LG GG LG AA+ H++NH+L K+ LF SG V L YGTR + Sbjct: 304 NRLFALSSVEHMGIIACALGFGGYLGALAAVFHVVNHALVKSALFLSSGLVTLSYGTRKI 363 Query: 371 NVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLT 430 + GM++ P L GA A+ G PPF F SE + I AG+ + +VL L + Sbjct: 364 EGIRGMMRSYPALGALVLAGAYAIIGGPPFGTFQSELLAIMAGVKSGNPFALVLFLAAIV 423 Query: 431 LVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGA 490 + A L+ ++ +P + + + +P+ ILL++ L +G +IP+P+ L A Sbjct: 424 VAFAALLVSCTNMVFGEPASSTEK--YPHILKAPITILLLLSLLLGVYIPEPLRSCLENA 481 Query: 491 STIVLSG 497 ++ G Sbjct: 482 GRSIVGG 488 >UniRef50_B3DZT2 NADH dehydrogenase subunit L n=2 Tax=Verrucomicrobia RepID=B3DZT2_METI4 Length = 601 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 132/486 (27%), Positives = 227/486 (46%), Gaps = 35/486 (7%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTV-LHSLGITLLLILALWVVQTAAD 59 M+ + LLLL+PL + + +A K S ++ V+V + + L ++L + + Sbjct: 1 MNEQFLAWLLLLSPLSSAFIIWAFLKPFPSLSQWVSVGACGIAFLVSLGISLGSIPEPSP 60 Query: 60 AGEIFAAGLWLHI----DGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 I GL + + D L + L ++ +G + IYS+GYM + + Sbjct: 61 ISWIDVGGLSIQLGMVFDPLSKVMLLVVSGVGLMIHIYSMGYMAEDPGR--------SRF 112 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTV 174 + LF+ +ML +V + N I+M+ E +SS L+G + ++ S AA K + + Sbjct: 113 FAELSLFMLSMLGIVVATNFIMMYIFWELVGVSSYLLIGFWFEKPSAAAAATKAFLANRI 172 Query: 175 GVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 G L G +L + S+M +A + L + L+ + + L G K+ Sbjct: 173 GDFGFLLGIILFWTLTGSLMFDPSVASY---------LKNHPLVTIMGLLLFCGCVGKSA 223 Query: 235 LFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFG 293 P+H WLPDA E P+PVSAL+ A ++ + +L R + ++ Q S ++ G Sbjct: 224 QIPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYMLCRIFFVLEQ---SPQALDVIAWTG 279 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 ++ AVAA Q DIKR+LAYS++ +G + + +G AA+ H+ H+ K L Sbjct: 280 AITAAVAALTATQQDDIKRILAYSTMSQLGYMVMAVG---SSATVAAMFHLCTHAFFKAL 336 Query: 354 LFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LF G+G+VL + +D+ + G+ K MP T + F G+ ALAG+P F+ F S+ I Sbjct: 337 LFLGAGSVLHVLHHEQDIWKMGGLWKKMPLTFLTFLIGSCALAGIPGFSGFFSKDTIIEM 396 Query: 413 GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV--NRGDLGWLTTSPMVILLV 470 +N +L L L L + R+ P V + + + PM++L Sbjct: 397 VGEKNRVLFW-LALFTAGLTAFYMTRLFVVTFFGPPKTEVAAHAKESPLVMVLPMLVLSF 455 Query: 471 MMLAMG 476 + G Sbjct: 456 FAVVGG 461 >UniRef50_B6YTX9 Hydrogenase 4, component F or formate hydrogen lyase, subunit 3 n=3 Tax=Thermococcus RepID=B6YTX9_THEON Length = 522 Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats. Identities = 125/511 (24%), Positives = 227/511 (44%), Gaps = 30/511 (5%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAAD------ 59 + L + P+LF+ + + +G L L+ + + + + Sbjct: 3 IVGLTPVIPILFAFALPLTSIIVRGNRKIIQAYALIGTGLTLLASYELFRQVYNSSKPLI 62 Query: 60 ---AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 G G+ +D + LF + + FL IYS Y+ HE L YY Sbjct: 63 YTFGGWTAPVGIIYEVDRMSALFALVTAALMFLIAIYSYRYLEHEEG--------LEWYY 114 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVG 175 + +L V+ + + ++ IE T++++ LV Y R S+ A KY I +G Sbjct: 115 TLYLGLEAGLLGVLLTGDAFNLFVMIEVTSIAAYALVMFYRDRGDSICAGLKYAFIGALG 174 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLML---LAFVFLLIGFGTK 232 +Y ++ A+ + + + +A F K Sbjct: 175 TTMYFLALGTLYGAFGTLNMANLSALIHGLSFPIAGTTYGNIAIASGVALALATWAFLIK 234 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGS-------DFP 285 + P H WLP+AH APSP+SA+LS +++N + LIR+ + S Sbjct: 235 AAIVPNHFWLPEAHPAAPSPISAILSGLVVNVGVYSLIRFLYTVYGGEVSGSLGGVIHAL 294 Query: 286 NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 + +L++ G +S A + QRD+K+L+AYS++ +MG +A+ +G+G L + AA HI+ Sbjct: 295 SVILIVLGAVSALFGALMMNAQRDVKKLIAYSTIMHMGYLAMAVGVGTQLALQAAAFHII 354 Query: 346 NHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 NH++AK LLF +G + G+RD++ + G+ + MP L+L G+PPFN+F S Sbjct: 355 NHAIAKALLFLAAGAFIHAVGSRDISDLAGLGRQMPVATFGLAIATLSLVGIPPFNVFFS 414 Query: 406 EFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPM 465 + + A + + L ++L+L + L VR+ + + KP + + G + + Sbjct: 415 KLLLFNAFMEESPAL-ALVLVLSSVIALVAYVRVFQEIWLGKPRENTTIREHG-SMSGVL 472 Query: 466 VILLVMMLAMGTHIPQPVIRILAGASTIVLS 496 +IL V+ L +G P + + A + + Sbjct: 473 LILAVICLLLGLFAPYIIEHYINPAVSQAMD 503 >UniRef50_C6W0W0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W0W0_DYAFD Length = 658 Score = 314 bits (805), Expect = 5e-84, Method: Composition-based stats. Identities = 122/499 (24%), Positives = 213/499 (42%), Gaps = 57/499 (11%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI---- 63 LLL P LL + + L ++ L+ + + ++ Sbjct: 11 YLLLGLPFSCFLLLWLGGTSLNKYAGWIGALVTVAGLLISFTYIPNLGIPYSLLQVPLPW 70 Query: 64 FAAG-----LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 FA G L L D L L L I+ + L +YS YM + + Y+ F Sbjct: 71 FAVGERYIDLSLRFDTLSTLMLVIVHFVALLVQLYSTAYMHAD--------RNVNRYFAF 122 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVA 177 LFLF+ML +V ++NL++M+ E LSS L+G + + + AA K ++ +G A Sbjct: 123 IQLFLFSMLGIVLASNLLMMYIFWELVGLSSYLLIGFWYTKKRPVWAAQKAFVLNRIGDA 182 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L G ++++ + + + + ++ + + L G K+ FP Sbjct: 183 AFLTGILMLFYYVGVTDLEV--------LALEIGTIPQGILTVIGICLFGGCVGKSAQFP 234 Query: 238 MHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 + WLPDA E P+PVSAL+ A ++ + +L R ++ ++L+ G ++ Sbjct: 235 LSGWLPDAM-EGPTPVSALIHAATMVAAGIFLLARISFLLTVD-----ARLVILVIGAIT 288 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + + A L DIK++LAYS++ +GL+ + +G G A+ H+ H+ K LF Sbjct: 289 MVIGAVKALNGWDIKKVLAYSTMSQLGLMVMAVGFGS---WQTAMFHLATHAFFKAGLFL 345 Query: 357 GSGNVLLK-------------YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 +G+V+ + +D+ + G+ K +P T + F A ALAG+P F+ F Sbjct: 346 SAGSVIHAVTPHEEHTGAEPQFDPQDMRTMGGLRKALPITFICFSICAAALAGLPFFSGF 405 Query: 404 LSEFMTITAG------LARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP--PQAVNRG 455 LS+ IT G L VL++L L + R + P AV+ Sbjct: 406 LSKDAIITEGFLWASEFGALGYLFPVLVVLSAGLTAFYMTRQVWLIFFGNERFPAAVHPH 465 Query: 456 DLGWLTTSPMVILLVMMLA 474 + PM +L + + Sbjct: 466 ESPVAMWLPMALLSALSVF 484 >UniRef50_Q1IZW2 NADH-quinone oxidoreductase, L subunit n=3 Tax=Deinococcus RepID=Q1IZW2_DEIGD Length = 639 Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats. Identities = 126/501 (25%), Positives = 212/501 (42%), Gaps = 62/501 (12%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILA---------LWVVQTA 57 FALL+L P LF R ++TVL S + +L L LW Sbjct: 14 FALLILFPRLF-------PGRSAGWLGSLTVLASFVVAVLRYLGQTETPAHEVLWTWLPN 66 Query: 58 ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 A G ++D L L I+ +GFL +YSI YM H+ ++ Sbjct: 67 MALNANLAVG--FYLDQLSALMALIITGVGFLIHVYSISYMGHDP--------KFVRFFA 116 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEA------------- 164 F + F+ ML++V +++ +M+ E +S L+G + + EA Sbjct: 117 FMNFFVGMMLILVLADSYPLMFVGWEGVGTASYLLIGFWFSGRNSEAPDRKLREASDREG 176 Query: 165 ------AWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLM 218 A K I+ +G + G L+Y +++ + Q+ + Sbjct: 177 VANSNAARKAFIMNRIGDLGFMLGMFLLYKLYGTLVIPELAGRVAGAQVAQAG------I 230 Query: 219 LLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIIC 277 LA +FLL+G K+G P+ WLPDA + P+PVSAL+ A ++ + ++ R + + Sbjct: 231 ELACLFLLVGAVGKSGQLPLTTWLPDAMA-GPTPVSALIHAATMVTAGVYLIARSHFLYD 289 Query: 278 QAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGI 337 A + + G L+ A L Q DIK++LAYS+V +G + + +G+ Sbjct: 290 LAPTASTW---VAWVGALTALYGALSALNQHDIKKILAYSTVSQLGYMFLAVGLH---AY 343 Query: 338 FAALLHILNHSLAKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAG 396 A + H+L H+ K LLF +G V+ +D+ + G+ MPFT + G LA+AG Sbjct: 344 SAGVFHLLTHAFFKALLFLSAGAVIHALHEEQDVRAMGGLRTFMPFTHLAALMGVLAIAG 403 Query: 397 MPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV-NRG 455 +P ++ F S+ + + +L V+ L + L + R V V + Sbjct: 404 IPIWSGFFSKDAILATAFTADPIL-YVVGLGVALLTAFYMGRWYFLVWQGDYRGHVAHPH 462 Query: 456 DLGWLTTSPMVILLVMMLAMG 476 + L P+ IL + G Sbjct: 463 EADGLMQVPLGILAALATFGG 483 >UniRef50_C7JBM0 NADH-quinone oxidoreductase chain L n=8 Tax=Acetobacter pasteurianus RepID=C7JBM0_ACEP3 Length = 646 Score = 314 bits (804), Expect = 8e-84, Method: Composition-based stats. Identities = 122/498 (24%), Positives = 216/498 (43%), Gaps = 37/498 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL--------WVVQTA 57 +F+ +LTPL+ + + + L +GI L + + T Sbjct: 7 LFSAAVLTPLVGATVAGLGGRFMGDTLAKAVTLLCMGIATLCAIGALWGGWLAGFGHSTV 66 Query: 58 ADAGEIFAAGL----WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 A + A G L D L +A++ V+ L YS+GYM H+ + Sbjct: 67 LLAQWVHAGGFDATWTLRFDALSVTMVAMVLVVSLLVHCYSLGYMSHD-------AMPTY 119 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIIC 172 ++ + LF F ML++V+SN+LI ++ E L+S L+G + R S AA K ++ Sbjct: 120 RFFSYLSLFTFAMLMLVSSNDLIQLFFGWEGVGLASYLLIGYWYDRPSATAAAIKAFVVN 179 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLL--AFVFLLIGFG 230 V F L G L+Y +V A A + +L + +L + L +G Sbjct: 180 RVADLFFLVGIGLIYVLFHTVQYDAIFAQVPQVLNAPYTLFGISFRMLEVICLLLFVGAM 239 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ +H WLPDA E P+PVSAL+ A ++ + ++ R ++ A + + Sbjct: 240 GKSAQLFLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLMARMSPLLEFAPAT---RTFI 295 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 ++ G + AA +VQ DIKR +AYS+ +G + +G+G A++ H+ H+ Sbjct: 296 ILIGATTCFFAATVGMVQPDIKRTIAYSTCSQLGYMFAAVGVG---AYQASVFHLTTHAF 352 Query: 350 AKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 K LLF G+G+V+ +++ + G+ K +P T + G+LALAG+ PF + S+ Sbjct: 353 FKALLFLGAGSVIHAMHDEQNMFKMGGLWKKLPLTYTVMWIGSLALAGVFPFAGYWSKDA 412 Query: 409 TITAGLARN---HLLIIVLLLLLLTLVLAGLVRMAARVLMAK---PPQAVNRGDLGWLTT 462 + A + + L + L R+ V + + + + Sbjct: 413 ILNALWSTGSSASIYAWSLGTITAFLTAFYSWRLIFLVFHGQAADAHARDAAHESPAVMS 472 Query: 463 SPMVILLVMMLAMGTHIP 480 P+V+L + G + Sbjct: 473 VPLVLLAFGAVVAGILLA 490 >UniRef50_Q9RGZ5 Na(+)/H(+) antiporter subunit A n=9 Tax=Firmicutes RepID=MRPA_BACPF Length = 805 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 144/536 (26%), Positives = 233/536 (43%), Gaps = 57/536 (10%) Query: 15 LLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAA----DAGEIFAAGLWL 70 LL L+ F + R T ++ L + + I L + T + + G+ Sbjct: 13 LLAILIPFLYKYARRIHTGWFVLVLPLVLFIYFIQYLSITSTGGVVEHTIPWVPSLGINF 72 Query: 71 --HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLL 128 +DGL LF ++ IG L +YSI Y+ + +L ++Y + +F+ ML Sbjct: 73 TVFVDGLSLLFALLITGIGTLVILYSIFYLSKKTE-------SLNNFYVYLLMFMGAMLG 125 Query: 129 VVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFGLFGTVLVY 187 VV S+NLIV++ E T+L+S+ L+ + R S A K ++I G L G L+Y Sbjct: 126 VVLSDNLIVLYVFWELTSLASSLLISYWFHREKSTYGAQKSMLITVFGGFAMLGGFSLLY 185 Query: 188 ANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHS 247 + + + + L L A + +L+G TK+ FP H WLPDA Sbjct: 186 VMTGTFSIRGIIENVDL-------VTSSELFLPAMILVLLGAFTKSAQFPFHIWLPDAM- 237 Query: 248 EAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILV 306 EAP+PVSA L SA ++ + ++ R + GS LL FG++++ + + Sbjct: 238 EAPTPVSAYLHSATMVKAGIYLVARLTPVFA---GSAEWFWLLTGFGVVTLLWGSTSAVR 294 Query: 307 QRDIKRLLAYSSVENMGLVAVELGIGGPL--------------GIFAALLHILNHSLAKT 352 Q+D+K +LA+S+V +GL+ LG+G I AA+ H++NH+ K Sbjct: 295 QKDLKGILAFSTVSQLGLIMTLLGLGSAAIYFGESVDPAFYSFAIMAAIFHLINHATFKG 354 Query: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LF +G + + GTRD+ + G++ IMP T + G ++AG+PPFN FLS+ M TA Sbjct: 355 SLFMTAGIIDHETGTRDIRKLGGLMAIMPVTFTVSLIGLASMAGLPPFNGFLSKEMFFTA 414 Query: 413 GLARN----------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA---VNRGDLGW 459 L ++I+VL + + M + K V + Sbjct: 415 LLRATEMNAFNMETFGIIIVVLAWIASVFTFLYCLIMFFKTFTGKFKPENYDVKVHEAPI 474 Query: 460 LTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRST----WHDF 511 VIL +++ G I+ A VL WH F Sbjct: 475 GMLISPVILGSLVIVFGFFPNILAYTIIEPAMQAVLPTVLADGELFHVNIYMWHGF 530 >UniRef50_Q608Y7 NADH dehydrogenase I, L subunit n=2 Tax=Gammaproteobacteria RepID=Q608Y7_METCA Length = 613 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 120/524 (22%), Positives = 223/524 (42%), Gaps = 41/524 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL-WVVQTAADAGEIF 64 + L+ PL L+ R A S+G++ L +L + + T +F Sbjct: 4 LLCLVPFLPLTGFLILTCSEGRLPRAYVPWIGAGSVGLSAALATSLAFELLTLEPEARVF 63 Query: 65 AAGLW-------------LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 LW ++D L L ++ IGFL +YS GYM + Sbjct: 64 RQTLWHWMAAGDFGVDFAFYLDALSLNMLLVVTGIGFLIHVYSAGYMADDPG-------- 115 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYII 170 + ++ + +LF+F ML++V ++NL +++ E L S L+G + ++ + AA K + Sbjct: 116 MARFFAYMNLFVFAMLILVLADNLPLLYLGWEGVGLCSYLLIGFWYEKPENGYAARKAFV 175 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 + VG G L+++ ++ Q M+ ++ S+L +LL + Sbjct: 176 VTRVGDTAMALGLFLLFSQLGTLDIQEAMSRAGAQWPAGSTLATAAALLLLGGAV----- 230 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ P+ WLPDA + P+P+SAL+ A ++ + ++ R + + A L+ Sbjct: 231 GKSAQLPLQVWLPDAMA-GPTPISALIHAATMVTAGVYLIARTHALFTLA---PEVQTLV 286 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 + G +++ ++ F L Q DIKR+LAYS++ +G + + LG+G AA+ H+ H+ Sbjct: 287 AVIGAITLLISGFSALTQTDIKRVLAYSTISQIGYMFLALGVG---AWSAAIFHLTTHAF 343 Query: 350 AKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 K LLF G+G V+L + +D+ + G+ + +P F G AL G+P + + S+ Sbjct: 344 FKALLFLGAGAVILSLHHEQDIFRMGGLRRSLPLVFWTFLAGLAALVGLPFTSGYYSKHE 403 Query: 409 TITAGLARNHL--LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMV 466 + + L R+ P + G +P+V Sbjct: 404 ILLTAYGAGSAGSWLWAAGTAGAVLTGLYSTRLLLIAFFG-PERTPAHRHYGSNIAAPLV 462 Query: 467 ILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHD 510 +L ++ LA G P+ L T + L + + Sbjct: 463 VLAILSLAGGLAK-LPLFPALPETGTDQAGDSPGLLTTAAPFLG 505 >UniRef50_A8ERK5 NADH-quinone oxidoreductase, L subunit n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ERK5_ARCB4 Length = 628 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 115/496 (23%), Positives = 227/496 (45%), Gaps = 42/496 (8%) Query: 1 MSYSVMFALLLLTPLLFSLLC----FACRKRRLSATRTVTVLHSLGITLLLILALWVVQT 56 M+ S + ++L PL ++L F K+ + ++ ++ + ++ L + Sbjct: 1 MNTSALVW-IILAPLFGAILNGSLYFYHIKKSKISENYFALIGTITPLISFLITLSLFLR 59 Query: 57 AADAGEIFAAGL--WLHID-----------GLGGLFLAILGVIGFLTGIYSIGYMRHEVA 103 + IF + WL++D L + +G+L IY+IGYM+ + Sbjct: 60 MLEEKIIFKQHIFTWLNVDKLNIEMAFLGDNLSIFMSMFVTFVGWLIHIYAIGYMKGDDG 119 Query: 104 HGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSL 162 G+ ++ +F+LFL +ML++V ++N I+++ E + S L+ Y G + ++ Sbjct: 120 FGK--------FFAYFNLFLASMLILVLADNPIILFIGWEGVGVCSYLLIKFYYGSKDNV 171 Query: 163 EAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAF 222 AA K I+ VG L G V ++ V + + + +L++L+ Sbjct: 172 IAANKAFIVNRVGDFGFLLGVVTLFFALGQVD------LSFGTIEANIGNTTNSLLILSG 225 Query: 223 VFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIG 281 L +G K+ P++ WLPDA + P+P+SAL+ A ++ + ++ R++ + G Sbjct: 226 FLLFVGAMGKSAQVPLYVWLPDAMA-GPTPISALIHAATMVTAGVYMVARFHFLYA---G 281 Query: 282 SDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAAL 341 + + G +S +AA Q DIK++LAYS++ +G + + +G+G L Sbjct: 282 IEEIGIFIAYIGAISALLAAVIATKQTDIKKILAYSTMSQLGYMFIAVGLGF---YSTGL 338 Query: 342 LHILNHSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 H+ H+ K +LF G+G +++ + +++ + +P + F G +A++G+PPF Sbjct: 339 FHVFTHAFFKAMLFMGAGGIIIALHHEQNIFKIAKHRANLPIIGLTFLIGVIAISGIPPF 398 Query: 401 NIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWL 460 + F S+ + A LI + L L + RM V +A V+ Sbjct: 399 SGFFSKDAILAAAFQEGQYLIYGIALFTAFLTAYYMFRMYFIVFVAPNHHDVDYVYTSKT 458 Query: 461 TTSPMVILLVMMLAMG 476 T P++IL + + G Sbjct: 459 ITLPLLILAIGAVGAG 474 >UniRef50_B3PW10 NADH-ubiquinone oxidoreductase protein, chain L n=51 Tax=cellular organisms RepID=B3PW10_RHIE6 Length = 666 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 118/520 (22%), Positives = 217/520 (41%), Gaps = 63/520 (12%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA----- 60 ++ ++ PL+ +++ R + + S + + IL+ +V T Sbjct: 3 LYKAIVFLPLIGAIVAGLFG--RAIGAKASEYVTSGLMIIAAILSWYVFFTVGMGHAEGG 60 Query: 61 -------GEIFAAGL----WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSP 109 I + G+ L +D L + L ++ + L +YSIGYM + Sbjct: 61 PIKVEVLRWIQSGGIDVSWSLRVDTLTSVMLVVVNTVSMLVHVYSIGYMHTDPHR----- 115 Query: 110 VTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKY 168 ++ + LF F ML++VT++NL M+ E L+S L+G + ++ S AA K Sbjct: 116 ---PRFFAYLSLFTFAMLMLVTADNLAQMFFGWEGVGLASYLLIGFWFKKPSATAAAMKA 172 Query: 169 IIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAF------ 222 I+ VG + G V+ ++ A + + ++L F Sbjct: 173 FIVNRVGDFGFVLGIAGVFVLFGAINLDTIFANASNFAPHEGGGEAGEVILNLFGMQLDK 232 Query: 223 --------VFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYY 273 + L +G K+ F +H WLPDA E P+PVSAL+ A ++ + ++ R Sbjct: 233 AHALTGVCLLLFMGAMGKSAQFLLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLVARMS 291 Query: 274 IIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGG 333 + + + ++ + G ++ AA LVQ DIKR++AYS+ +G + V LG+G Sbjct: 292 PLFELSPDA---LTVVTVIGAITAFFAATVGLVQNDIKRVIAYSTCSQLGYMFVALGVG- 347 Query: 334 PLGIFAALLHILNHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGAL 392 AA+ H+ H+ K LLF +G+V+ G +D+ + G+ + T + G L Sbjct: 348 --AYGAAIFHLFTHAFFKALLFLCAGSVIHAVDGEQDMRYMGGLRPHIKVTFWMMIIGTL 405 Query: 393 AL--AGMP----PFNIFLSEFMTITAGLARNHLL---IIVLLLLLLTLVLAGLVRMAARV 443 A+ G+P F F S+ + I A A + + LL++ R+ Sbjct: 406 AITGVGIPFTPIGFAGFFSKDVIIEATYASHSPVSGFAFSLLVIAALFTSFYSWRLIFMT 465 Query: 444 LMAKPPQA----VNRGDLGWLTTSPMVILLVMMLAMGTHI 479 KP + + + + P+ +L + + G Sbjct: 466 FFGKPRASHEVMHHVHESPQVMLVPLYLLAIGAVFAGVIF 505 >UniRef50_Q9I0J1 NADH-quinone oxidoreductase subunit L n=113 Tax=Gammaproteobacteria RepID=NUOL_PSEAE Length = 615 Score = 312 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 121/494 (24%), Positives = 224/494 (45%), Gaps = 39/494 (7%) Query: 16 LFSLLCFACRKRRLSATRTVTVLHSLGITLLLIL-ALWVVQTAADAGEIFAAGLW----- 69 + LL R R + + S+G++ L A++ ++ G ++ LW Sbjct: 13 VGFLLLSFSRGRWSENLSALVGVGSVGLSALSAAWAIFSFHSSPPEGGAYSLVLWQWMAA 72 Query: 70 --------LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 L++DGL L ++ +GFL +++ YMR E + ++ + +L Sbjct: 73 GDFSTNFTLYLDGLSVTMLGVVTGVGFLIHLFASWYMRGETGY--------SRFFAYTNL 124 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAWKYIIICTVGVAFGL 180 F+ +ML +V +NL+ ++ E L S L+G Y R++ AA K I+ VG F Sbjct: 125 FIASMLFLVLGDNLLFLYFGWEGVGLCSYLLIGFYYSNRNNGNAALKAFIVTRVGDVFMA 184 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 FG +++ ++ Q + + + + + L + L + K+ P+ Sbjct: 185 FGLFILFQQFGTLNIQELLVLAPQKFPEGNLWLTLATLALLGGAV-----GKSAQLPLQT 239 Query: 241 WLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WL DA + P+PVSAL+ A ++ + ++ R + + A L+ I G +++ + Sbjct: 240 WLADAMA-GPTPVSALIHAATMVTAGVYLIARCHGLFTLAPD---ILELVGIVGAVTLVL 295 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 A F LVQ DIKR+LAYS++ +G + + LG+G AA+ H++ H+ K LLF SG Sbjct: 296 AGFAALVQTDIKRILAYSTMSQIGYMFLALGVG---AWDAAIFHLMTHAFFKALLFLASG 352 Query: 360 NVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMP-PFNIFLSEFMTITAGLARN 417 V++ + +++ + G+ K +P F G ALA +P F S+ + A Sbjct: 353 AVIVACHHEQNIFKMGGLWKKLPLAYASFVVGGAALAALPFLTAGFYSKDEILWEAFASG 412 Query: 418 HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGT 477 H +++ L+ L R+ +P + G G P+ +L+V+ +G Sbjct: 413 HRELLIAGLVGAFLTSIYTFRLIFVAFHGEPKTEAHAGH-GISHWLPLSVLIVLSTFVGA 471 Query: 478 HIPQPVIRILAGAS 491 I P+ +L + Sbjct: 472 LITPPLAGVLPESV 485 >UniRef50_B0SZ37 Proton-translocating NADH-quinone oxidoreductase, chain L n=7 Tax=Alphaproteobacteria RepID=B0SZ37_CAUSK Length = 694 Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 107/473 (22%), Positives = 196/473 (41%), Gaps = 43/473 (9%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 + +L+L PL+ +++ +R +L ++ L ++ T Sbjct: 1 MQTLVTILVLAPLVAAIIAGLFGRRIGDVASQAITTGALILSCALGWYVFSQWTWGHMEA 60 Query: 63 I------------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPV 110 F + + ID L + L ++ + L +YS GYM + Sbjct: 61 FTVDLLPFIHVGNFVSNWSIRIDALSAVMLIVVTTVSALVHVYSWGYMAEDPDK------ 114 Query: 111 TLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYI 169 ++ + LF F ML +VT+ + + ++ E L+S L+G + ++ + AA K Sbjct: 115 --PRFFAYLSLFTFAMLALVTAADFMQLFFGWEGVGLASYLLIGFWYKKPTASAAAVKAF 172 Query: 170 IICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDP--TLMLLAFVFLLI 227 ++ VG G + + ++ + + + L+ +A L + Sbjct: 173 VVNRVGDFGFALGIMTTFWAYGTIQFHELFPLIAASAPRTWEFAGHVFPLVDIACFLLFV 232 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPN 286 G K+ F +H WLPDA E P+PVSAL+ A ++ + +L + A Sbjct: 233 GAMGKSAQFFLHTWLPDAM-EGPTPVSALIHAATMVTAGVYMLCLLSPMFEYA---PIAK 288 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 ++ + G ++ AA L Q DIKR++AYS+ +G + GIG AA+ H+ Sbjct: 289 NIVTVIGAITALFAATVGLTQNDIKRVIAYSTCSQLGYMFFAAGIG---AYQAAMFHLFT 345 Query: 347 HSLAKTLLFCGSGNVLL-KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGM--PP---- 399 H+ K LLF G+G+V+ + +D+ + K++P T + G +A+ G+ PP Sbjct: 346 HAFFKALLFLGAGSVIHGMHHEQDMRKYGALTKLLPVTFIAMTIGTIAITGLGFPPLHLG 405 Query: 400 FNIFLSEFMTITAGLARNH-----LLIIVLLLLLLTLVLAGLVRMAARVLMAK 447 F F S+ I A A L ++ +L+ L R+A K Sbjct: 406 FAGFYSKDTIIEAAFAAGQANSTALFAWIIGVLVAGLTSFYSWRLAFFTFNGK 458 >UniRef50_Q7NHD8 NADH dehydrogenase subunit 5 n=1 Tax=Gloeobacter violaceus RepID=Q7NHD8_GLOVI Length = 605 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 140/504 (27%), Positives = 222/504 (44%), Gaps = 34/504 (6%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 + L L LFSL +A + + L G+ LL + A G Sbjct: 10 LIPLYCLAGALFSL-PWALTQSKGQRIAAFGGLFFTGLALLHASLMLPEVLAGAGGTFRF 68 Query: 66 AGLWLH---------IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 + I+ L L ++ + L +YS+GYM HE L YY Sbjct: 69 PWIDFGTLNIEVSGLINPLTAGTLVLVAGVSLLVQLYSLGYMDHEP--------RLARYY 120 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKY-IIICTVG 175 G F ML +V S+NL+ M+ E LSS LVG + + + AA K + VG Sbjct: 121 GLLSFFTMAMLGLVLSDNLLAMYGFWELMGLSSYLLVGFWWSKPAAAAAAKKAFLTTRVG 180 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGL 235 L G +L+Y NA ++ A +++ + L L + L G K+ Sbjct: 181 DFLLLIGILLLYVNAGTLEITALGE------WAETATIAAPLATLIVLLLFAGPVGKSAQ 234 Query: 236 FPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 FP+H WLPDA E P+P SAL+ A ++ + ++ R + S ++ G Sbjct: 235 FPLHVWLPDAM-EGPTPASALIHAATMVAAGVFMVARLEPVFA---LSSTALMVVAYTGA 290 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLL 354 ++ +A Q DIKR+LAYS++ +G + + LG+G AA+ H+ H+ K +L Sbjct: 291 ITALGSALMATAQNDIKRVLAYSTISQLGYMFMALGVGNTE---AAMFHLFTHAFFKAML 347 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 F G+G+V+ T+D+ + G++ MP TA +G G LALAG+ PF F S+ + A Sbjct: 348 FLGAGSVIHGAHTQDMREMGGLMGRMPVTAFTYGIGVLALAGVFPFAGFWSKDAILHALE 407 Query: 415 ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR-GDLGWLTTSPMVILLVMML 473 + + LL L + R V + KP + +R + W + P+VIL V Sbjct: 408 KAELYPVFAMGLLTAGLTAFYMARQYILVFLGKPSEKSSRAHESTWTMSLPLVILAVPSA 467 Query: 474 AMGTHIPQPVIRILAGASTIVLSG 497 A G + ++ + +VLS Sbjct: 468 AAGWLGNEWFLKEELDTTLLVLSS 491 >UniRef50_A1RWL8 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL8_THEPD Length = 737 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 140/440 (31%), Positives = 213/440 (48%), Gaps = 42/440 (9%) Query: 68 LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 L++D L L ++ + + I+SIGY E+ GE S L +Y LF+ +M+ Sbjct: 83 FALYVDKLSAFLLLVISFVALYSSIFSIGY--SEMYAGEYSISYLTFFYA---LFVLSMV 137 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLV 186 LVVT+N+ + + + E TLSS LVG + S +AA Y II G A L L+ Sbjct: 138 LVVTANDALSFYLSWELMTLSSYMLVGYEHRSEESRDAAKTYFIIAHAGGACILLSYALL 197 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 Y S+ A + + P + L F+ L+GFG+K G+ P+HAWLP AH Sbjct: 198 YFIKGSLSFDA----------FREGGVPPGIASLIFLLALVGFGSKAGIVPLHAWLPQAH 247 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD--FPNRLLLIFGMLSVAVAAFFI 304 APS VSALLS V+L A+ LIR + G + ++I S + F Sbjct: 248 PAAPSNVSALLSGVMLKVAVYGLIRVVFDFLKPSGVEGGLWGCAVMIIAAFSTIIGVQFA 307 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFA-----------ALLHILNHSLAKTL 353 +VQ D+KRLLAY S+EN+G++ + +G L AL H+LNH++ K+L Sbjct: 308 VVQHDLKRLLAYHSIENIGIILLGVGASLILYSEGLKDVAALALTAALYHLLNHAVFKSL 367 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 LF GSG+VL TR+ ++ G+ K +P+T+V F A+A+AG+PP N F SE++T + Sbjct: 368 LFLGSGSVLKSCRTRNFELLGGLSKYLPWTSVTFLIAAMAIAGVPPLNGFASEWLTYQSL 427 Query: 414 LAR-------------NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWL 460 LA L ++L L L + ++ + + +G Sbjct: 428 LAVVKEAAGKAPWVSLAALFSALMLGLAGALAVLCFTKVYGVTFLGPLGRVKPKGGESLT 487 Query: 461 TTSPMVILLVMMLAMGTHIP 480 M I + +G +P Sbjct: 488 MKIGMAIPAAACIVLGVAMP 507 >UniRef50_C7M2U8 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U8_ACIFD Length = 625 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 117/481 (24%), Positives = 211/481 (43%), Gaps = 46/481 (9%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 + ++ PLL L+ A KR + ++ + LALW V A A E A Sbjct: 3 LITAVIGFPLLGFLVLLAFGKRIGEPRAGWVGTIATTLSFVAALALWGVVLARPADERVA 62 Query: 66 --------------AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 A + +D L + + + L +YSIGYM + Sbjct: 63 VVRLFTWFRAGPLVAHISFRVDELTVFMVLFVTGVSSLIHLYSIGYMHRDP--------R 114 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYII 170 ++ + +LF+F+M ++V+SNNL + + E S +L+ + +R S A K I Sbjct: 115 FHQFFVYLNLFVFSMTVLVSSNNLPLTFLGWEGVGACSYWLISFWFERPSAASAGKKAFI 174 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 + +G A + GT L+ + SV +S +L ++ L + + + Sbjct: 175 VNRIGDAGFILGTALIVDHLHSV--------SYSVILPEAHRLSSGTLEAVALLFFLAAV 226 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ P+ WL DA E P+PVSAL+ A ++ + ++ R + A + ++ Sbjct: 227 GKSAQLPLFVWLLDAM-EGPTPVSALIHAATMVTAGVFLMARLSAFVTPAHDAA---TVI 282 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 G ++ VAA Q DIK+++AYS+V +G + + +G G AAL ++ H+ Sbjct: 283 AWIGAITAFVAAMAATSQHDIKKIVAYSTVSQLGYMMLGIGTG---AYVAALFLMVTHAF 339 Query: 350 AKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 K L+F SG+V+ G +D+ + + + MP TAV L++AG+PPF+ F S+ Sbjct: 340 YKALIFLASGSVIHSLDGEQDVRRMGALRRFMPITAVTMILAWLSIAGVPPFSGFFSKGS 399 Query: 409 TITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP-----QAVNRGDLGWLTTS 463 + A A + ++ + ++ L + R+ V +P + + + T Sbjct: 400 VLEAAFA-HQPVLWAIGVVTAVLTAYYMGRLVYVVFYNEPRYQEVLGERSPHESPRVMTV 458 Query: 464 P 464 P Sbjct: 459 P 459 >UniRef50_Q9UYP1 Hydrogenase 4, component F or formate hydrogen lyase, subunit 3 n=1 Tax=Pyrococcus abyssi RepID=Q9UYP1_PYRAB Length = 499 Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats. Identities = 126/497 (25%), Positives = 228/497 (45%), Gaps = 26/497 (5%) Query: 10 LLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLW 69 ++ F+L F+ L G+TL+ L+ + ++ ++ G W Sbjct: 9 IIPLVFAFALPLFSVVVGGNRKIIQAYALLGTGLTLISTFKLFQLTYSSSLPIVYTFGKW 68 Query: 70 -------LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 +D L L + V+ FL IYS Y+ E L YY + Sbjct: 69 RAPIGIVYEVDRLSSLIALVTAVLMFLIAIYSYRYLEREKG--------LEWYYTLYLGL 120 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLF 181 +L V+ + + ++ IE T++++ LV Y R S+ A KY +I VG Sbjct: 121 ESGLLGVLLTGDAFNLFVMIEVTSIAAYALVMFYRDRKDSVLAGLKYALIGAVGTTMYFL 180 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 + Y +V SS +A V F K +FP H W Sbjct: 181 ALGVFYGTFGTVNFADLSEKL------HSSGNVVLASSVALVLATWAFLIKATIFPNHFW 234 Query: 242 LPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGS--DFPNRLLLIFGMLSVAV 299 LP+AH APSP+SA+LS +++N + +IR+ + + + + ++I G +S Sbjct: 235 LPEAHPAAPSPISAILSGLVVNVGVYAMIRFLYTLYSGLSWIIGWLSFAIIILGAISSIF 294 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 A + QRD+KRL+AYS++ +MG + + +G+G LG+ AAL H++NH++AK LLF G Sbjct: 295 GALMMNTQRDVKRLVAYSTIMHMGYLLMAVGVGTQLGLQAALFHLINHAIAKALLFLAVG 354 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 + G+R+++ + G+ + MP T L+L G+PP N+F S+ + A L ++ Sbjct: 355 VFIHVAGSRNIDDLAGLGRKMPITTFSLAIATLSLVGIPPLNVFFSKLLLFNALLEKSFF 414 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHI 479 L +V+ + + L +R+ + + KP + ++ + + +IL ++ +A+G Sbjct: 415 LALVIAV-TSVIALVAYMRVLYTLWLGKPREDLDVKE-SISMSMICLILALICIAIGLIA 472 Query: 480 PQPVIRILAGASTIVLS 496 P + +++ A + Sbjct: 473 PIVLEKLINPAVIQAMD 489 >UniRef50_D2RZ77 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RZ77_9EURY Length = 681 Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats. Identities = 129/491 (26%), Positives = 210/491 (42%), Gaps = 48/491 (9%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAAD-------- 59 + L PL + + R+L + + + +LL L ++ + + Sbjct: 13 PAIALFPL-AAFVISLVFGRQLPKKGAIPGIFATAASLLFSLWMFATVASGETYHETLYE 71 Query: 60 ----------AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSP 109 E A L ID L L L I+ ++ FL ++S+GYM E G Sbjct: 72 WSAGAVTTEVGAEEIAFSFGLLIDPLSALMLIIVSLVAFLVHVFSLGYMNDEGETG---- 127 Query: 110 VTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKY 168 L YY LF F+ML V ++NL++ + E L S L+G + +S+ AA K Sbjct: 128 --LPRYYASLGLFTFSMLAFVYADNLLMAFMFFELVGLCSYLLIGFWFRTKSAPSAAKKA 185 Query: 169 IIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWS------EVLKQSSLLDPTLMLLAF 222 ++ G F L G V + + +V E + + + T + + Sbjct: 186 FLVTRFGDYFFLIGVVAIASTFGTVAFAGEESFVVAAETAIEDGTTLFGFDAQTWVTITG 245 Query: 223 VFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIG 281 + +L G K+ FP+H WLPDA E P+ VSAL+ A ++ + ++ R Sbjct: 246 LLVLGGVIGKSAQFPLHTWLPDAM-EGPTTVSALIHAATMVAAGVYLVARM---FGYYAL 301 Query: 282 SDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAAL 341 S ++ G + AA +V+ DIK++LAYS++ G + + +G+G G A + Sbjct: 302 SPTALAIIAFVGGFTALFAATMGVVKDDIKQVLAYSTISQYGYMMLGMGVG---GYVAGV 358 Query: 342 LHILNHSLAKTLLFCGSGNVL-LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 H++NH+ K LLF GSG V+ L + +D+ + G+ P T F GALALAG+ PF Sbjct: 359 FHLMNHAFFKALLFLGSGAVIVLMHHEQDMWKMGGLKDKAPVTYYTFLAGALALAGIVPF 418 Query: 401 NIFLSEFMTITAGLARNH-----LLIIVLLLLLLTLVLAGLVRMAARVLMAKP--PQAVN 453 + F S+ + L L + LL + RM +P A N Sbjct: 419 SGFWSKDEVLFDALIVGLEEPVILAAYAMGLLGVFFTGFYTFRMVFLTFHGEPRSETAEN 478 Query: 454 RGDLGWLTTSP 464 +GW +P Sbjct: 479 PHGVGWSIKAP 489 >UniRef50_C6CN10 NADH/Ubiquinone/plastoquinone (Complex I) n=15 Tax=Gammaproteobacteria RepID=C6CN10_DICZE Length = 679 Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 131/500 (26%), Positives = 227/500 (45%), Gaps = 46/500 (9%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF-- 64 L L L +L C +R A R + G ++ A V+ IF Sbjct: 14 LGLSLALYLAGALFSLLCCRRESLAIRLSGLCALAGGCAGVLAAAPVLLGGGALTAIFDG 73 Query: 65 ----AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 A L L D L ++ ++ ++ +YS+ Y+ G + F + Sbjct: 74 PFDAFAHLTLRFDTLAAFMTLVISLLVTVSALYSLAYLEEYRGRGAWAMG------FFMN 127 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 LF+ +M+ +V +N E +LSS FLV ++ A Y +I G + Sbjct: 128 LFVASMVALVVVDNAFYFIVLFEVMSLSSYFLVIADQDDEAVSAGLLYFLIAHAGSVLIM 187 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 L+Y ++AS+ + + L + F+ GFG K G+ P+H Sbjct: 188 AAFFLLYRHSASLDFAD----------FRHASLSAPQASVVFLLAFFGFGAKAGMLPLHG 237 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 WLP AH APS SAL+S V++ + +I+ I + A + + ++L FG +S + Sbjct: 238 WLPRAHPAAPSHASALMSGVMVKIGVFGIIKVGIDLLGATET-WWGVVVLAFGAVSSVLG 296 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSL 349 + L + DIKRLLAY +VEN+G++ + +G+G LG+ L H+LNH++ Sbjct: 297 VLYALAEHDIKRLLAYHTVENIGIILMGVGVGMIGIATHHPLLALLGLLGGLYHLLNHAV 356 Query: 350 AKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 K LLF G+G V+ + T+D+ + G+ ++MP TA+ F G +A++ +PP N F+SE+ T Sbjct: 357 FKGLLFLGAGAVIYRVHTKDMEKMGGLARLMPRTALAFLVGCMAISALPPLNGFVSEWFT 416 Query: 410 ITAGLARNH----------LLIIVLLLLLLTLVLAGLVRMAARVLMAKP--PQAVNRGDL 457 + +H + IV+L + L V++ P +A + ++ Sbjct: 417 YQSLFTLSHDGGIGLRLAAPIAIVMLAITGALAAMCFVKVYGISFCGAPRSEKATHAREV 476 Query: 458 GWLTTSPMVILLVMMLAMGT 477 W T M++L ++ + +G Sbjct: 477 PWPMTVAMLLLALLCVLLGI 496 >UniRef50_D1Y0I6 Putative NADH dehydrogenase subunit L n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1Y0I6_9BACT Length = 686 Score = 311 bits (797), Expect = 5e-83, Method: Composition-based stats. Identities = 108/449 (24%), Positives = 191/449 (42%), Gaps = 32/449 (7%) Query: 62 EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYM--RHEVAHGELSPVTLCDYYGFF 119 E+ + + + + L ++ + F+ IYS GYM R E E +Y + Sbjct: 96 ELLTFNIGFRLSPISVMMLVVITTVSFMVHIYSFGYMAERGEHYEFEEYEHGFQRFYAYL 155 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAWKYIIICTVGVAF 178 +F +ML +V + N+ M+ E + S L+G Y + +++ A+ K I+ F Sbjct: 156 SMFTCSMLGLVVATNIFQMYLFWELVGVCSYLLIGFYYPKHTAVHASKKAFIVTRFADLF 215 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLL--AFVFLLIGFGTKTGLF 236 L G + + + + L + + T + A + IG K+ +F Sbjct: 216 FLIGILFFSFYVGTFNYDLNVNPELTVTLAKLATDPTTAWAIPTALFLMFIGGAGKSAMF 275 Query: 237 PMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 P+H WLPDA E P+PVSAL+ A + A + + + I G+ + + Sbjct: 276 PLHIWLPDAM-EGPTPVSALIHAATMVVAGVFQVASLLPIYLQFGAQEQLHWIAWIAAFT 334 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGI-----------------GGPLGIFA 339 AA Q+DIKR LA+S++ + + V LG+ G LG A Sbjct: 335 AFYAAAVACAQKDIKRGLAFSTISQIAYMLVALGVCFYDAKEGAFGSHGFLHHGGLGYMA 394 Query: 340 ALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPP 399 A+ H+ H++ K LLF SG +++ G+ + G+ K MP T + F G LA+AG+PP Sbjct: 395 AMFHLFTHAMFKALLFLCSGAIIVIIGSNFKEYMGGLHKYMPITNICFLIGCLAIAGIPP 454 Query: 400 FNIFLSEFMTITAGLA---RNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK------PPQ 450 F F S+ I+A A + ++ L+ + + R+ + + P Sbjct: 455 FAGFFSKDEIISACNALPGAEGQALKWIMTLVAGMTAFYMFRLYYVIFWGQSYYELDPEH 514 Query: 451 AVNRGDLGWLTTSPMVILLVMMLAMGTHI 479 ++ ++ P+V L ++ G Sbjct: 515 RRRPQEVPFVMWGPLVFLAIISCVAGLIP 543 >UniRef50_A5CFN9 NADH dehydrogenase I chain L n=2 Tax=Orientia tsutsugamushi RepID=A5CFN9_ORITB Length = 635 Score = 311 bits (797), Expect = 5e-83, Method: Composition-based stats. Identities = 113/493 (22%), Positives = 213/493 (43%), Gaps = 32/493 (6%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 S + LL PL+ ++ +TV+ + IL W + Sbjct: 1 MSFLITLLPCLPLISGVISRLNNSFATKIISYITVMLIASTSFAAILVFWNISKHNSVEH 60 Query: 63 I----------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 I F + ++ID L L L I+ +I + IYSIGY+ + L Sbjct: 61 IILFEWLELLNFKSHWAIYIDKLTALMLVIVSLISTIVHIYSIGYLHDDKE--------L 112 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAWKYIII 171 + + F F ML++V+S+N + ++ E +SS L+G + + +++ AA+K I+ Sbjct: 113 PKFMSYLSFFTFFMLMLVSSDNFLQLFFGWEGVGVSSYLLIGFWHKKYAAIIAAYKAFIV 172 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEM--AIFWSEVLKQSSLLDPTLMLLAFVFLLIGF 229 L + + N SV + A S+ + + +++ L L IG Sbjct: 173 NRFADCAFLLAIIAIIYNCNSVEFKTVFSHAEQLSKTIVSIVDIKISVLDLICCLLFIGC 232 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRL 288 K+ +H WLPDA E P+P SAL+ A ++ + +L R + S L Sbjct: 233 MGKSAQIGLHIWLPDAM-EGPTPASALIHAATMVTAGIFLLARCSFMFEY---STAILNL 288 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 + I G + + + + Q DIK+++AYS+ +G + + G A+ H+L H+ Sbjct: 289 IAITGGFTCILTSIIAVCQNDIKKIIAYSTCSQLGYMVMACG---SSSYNGAMFHLLTHA 345 Query: 349 LAKTLLFCGSGNVLLKYGTRDLNVV-CGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 K +LF +GNV+ +DLN + + ++MP+T LF G LA+ G+ PF+ F S+ Sbjct: 346 FFKAMLFLAAGNVIHMTHQQDLNKMPQQLWRVMPYTYGLFWLGTLAIVGIFPFSGFYSKD 405 Query: 408 MTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR--GDLGWLTTSPM 465 M + + ++ + L ++ + +++ + + ++ + P+ Sbjct: 406 MILESVYLTDNKFVYYLGIIAVFFTAMYSIKLIIGIFHQPSFSSTKHSIKEVSIIMNLPL 465 Query: 466 VILLVMMLAMGTH 478 +IL + G + Sbjct: 466 LILAIGSAISGWY 478 >UniRef50_C8W236 Hydrogenase, membrane subunit n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W236_DESAS Length = 661 Score = 310 bits (796), Expect = 7e-83, Method: Composition-based stats. Identities = 145/517 (28%), Positives = 236/517 (45%), Gaps = 42/517 (8%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF 64 +M LL L+ + LL RK L + L L + +L + Sbjct: 11 LMVILLYLSGAILPLLLKTSRKLSLWLGCFLGGAAGLLGLGLGLASLLAPEPWTVNLGTV 70 Query: 65 AAGLWLHI--DGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 G+ I DGL G F+A + ++ L YS YM + + +++F Sbjct: 71 LPGVVFQIVMDGLSGFFVATISLVVALVSFYSWNYMSIYKTEN------IAWWSFCYNVF 124 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLF 181 + +MLLVVT N I+ E TL+S FLV Y + +A + YI++ +G F + Sbjct: 125 VLSMLLVVTVTNAIMFLIFWELMTLASYFLVTFEYRHQQVRKAGFSYIVMTHLGTVFIMT 184 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 L++ ++ + S L + L FV LIGFGTK G+ P+H W Sbjct: 185 AFFLMFKGTGG--------WDFAVLSANSHGLPDAVKSLIFVCALIGFGTKAGIVPLHIW 236 Query: 242 LPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 LP AH APS VSA++S V+L A+ +IR I I G + ++L G++S + Sbjct: 237 LPLAHPAAPSNVSAVMSGVMLKTAIYGMIRLIIDIL-GPGPAWWGGVVLAVGVVSAVMGV 295 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLA 350 + L++ D+KRLLA+ SVEN+G++ + LG + + A L H+LNH++ Sbjct: 296 LYALMEHDMKRLLAFHSVENIGIILMGLGTALIFYAWSMPVAAAVALAAGLFHVLNHAIF 355 Query: 351 KTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 K+LLF G+G+V ++D+ + G++K MP TA+LF GA++++ +PPFN F SE+ Sbjct: 356 KSLLFLGTGSVYYTTHSKDIEELGGLIKKMPQTALLFLVGAISISAIPPFNGFASEYQIY 415 Query: 411 TAGLARNHLLIIVLLLLLLTLVLAG-----------LVRMAARVLMAKP--PQAVNRGDL 457 + L ++ + + L V+ +A P +A ++ Sbjct: 416 QSLLGMSYQKVSAFWSIAGVLSGVALALTGALAAACFVKAFGISFLALPRTKKAAAAEEV 475 Query: 458 GWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIV 494 +L M L V+ L G + I +V Sbjct: 476 PFLMRISMAPLAVLCLLFGVAPGLVLNNITPLIEQLV 512 >UniRef50_B9LUW7 NADH/Ubiquinone/plastoquinone (Complex I) n=13 Tax=cellular organisms RepID=B9LUW7_HALLT Length = 698 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 118/475 (24%), Positives = 196/475 (41%), Gaps = 32/475 (6%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF 64 ++ L+ F + + R T V + +L L G Sbjct: 12 LLAVLVSFVAAFFIVASYRSPNVREGWTIVAAVAKFAIVASMLPAVLDGAVFEWSLGAFL 71 Query: 65 AAGLW--LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 G+ L D LG LF + + +T YSIGYMR V Y+ F + Sbjct: 72 PGGIEFVLRADALGMLFAFLASGLWIVTSFYSIGYMRGNDE------VNQTRYFAAFAVS 125 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVA-FGLF 181 L + + + NL+ ++ E ++++ LV + A KY+ G L Sbjct: 126 LSATMGIAFAGNLVTIFVFYELLSIATYPLVAHDETDEARAAGRKYLAYTMFGGGVLVLA 185 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 GT LVY A +V F + +++ + DP L +LAF L IGFG K G+ P+H W Sbjct: 186 GTALVYLIAGNVS-------FTAGGIEELANADPGLAMLAFFLLAIGFGVKAGIMPLHQW 238 Query: 242 LPDAHSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQA--------IGSDFPNRLLLIF 292 LP+A AP+PVS LL AV ++ + R + + +L Sbjct: 239 LPEAMV-APTPVSGLLHAVAVVKSGAFGVSRVVLDVFGPELVFDLSLPFGFSAGLVLSTI 297 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G +++ A+ L + +K+ LAYS+V + + + LG+ G G+ ALLHI H+ K Sbjct: 298 GAITLTAASIIALRKDHLKQRLAYSTVSQLSYIILGLGLFGWYGLVGALLHIPAHAFMKL 357 Query: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LF +GN+ + T ++ + G+ K MP T F +L +AG+P F+S++ + Sbjct: 358 TLFFCAGNLHVSTHTDYISEMAGIGKRMPLTMGAFTVASLGMAGIPLLAGFVSKYYMLIG 417 Query: 413 GLARN------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLT 461 G+ ++ LLL L +A + + + + Sbjct: 418 GIRMGAQLTPVAYYLVGALLLSGVLNIAYFWPVIYTAFFEAEDAHDAKPLVDFRM 472 >UniRef50_C0GDB1 NADH dehydrogenase (Quinone) n=2 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDB1_9FIRM Length = 782 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 124/516 (24%), Positives = 217/516 (42%), Gaps = 47/516 (9%) Query: 4 SVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAA----D 59 S++ + PL SLL F R R + + + IT ++ +++ + A + Sbjct: 18 SLLPVFAVAVPLAGSLLVFFA-GRFSEKLRDICAVITALITFGIVFSMYPLVQQAVLQYE 76 Query: 60 AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 + + +D G +F A++ I FL +YSI YM H A YY F Sbjct: 77 FAKFLQVSIHFRVDFFGFVFAALMSCIWFLATLYSIAYMEHGRAKN--------RYYVFL 128 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFG 179 L L VV +L ++ E T SS LV ++ + + G Sbjct: 129 LSTLGHCLGVVLVGDLFSLFLFFELMTFSSYVLVIHEETPDAMAGGAVTLYLGVFGGLCL 188 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L L+Y N ++ + + +++ L+GFG K G+ P+H Sbjct: 189 LMAIFLLYFNVGTMEIIPLYEQIAASAINPYTVVT---------LFLVGFGIKAGMVPLH 239 Query: 240 AWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIIC----------QAIGSDFPNRLL 289 WLP AH AP+P SALLS +++ + R +I +I S + Sbjct: 240 IWLPKAHPVAPAPASALLSGLMIKAGAYGIFRVVGMIFTPSEFSEVAVPSIVSVNFGYAI 299 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVE------LGIGGPLGIFAALLH 343 + G++++ + AF L+ K++LAYSSV MG + + LG GP+G AL H Sbjct: 300 IWMGIITMFLGAFMALLSTGAKKILAYSSVSQMGYILLGVGTAAYLGFAGPMGFAGALYH 359 Query: 344 ILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 I+NH+ K LF G++ + D+ V GM K +PF AV F G + G+P FN + Sbjct: 360 IINHAFFKAGLFMMVGSIYMITHNLDITQVRGMAKKVPFIAVTFLIGYAGIGGIPGFNGY 419 Query: 404 LSEFMTITAGLARNHLLIIV-------LLLLLLTLVLAGLVRMAARVLMAKPPQAVNRG- 455 S+ + A + +L V + ++ + L ++ + + P+ ++ Sbjct: 420 GSKTILHHAIVDAANLHGSVPLHVAEKIFVVTSAMTLCYFAKLFRGLFLGDVPEKYDKKS 479 Query: 456 -DLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGA 490 + W + + +++A+G + R++ A Sbjct: 480 YNFTWPVYAVLGTFGAIIIAIGLFPHFLLNRMVIPA 515 >UniRef50_B8DNI8 NADH dehydrogenase (Quinone) n=4 Tax=Desulfovibrio vulgaris RepID=B8DNI8_DESVM Length = 1264 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 130/457 (28%), Positives = 208/457 (45%), Gaps = 36/457 (7%) Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 ID L LF I+ IG + +YS GY+ H+ G Y+ F L ++ + Sbjct: 278 IDPLSRLFGVIIAGIGLVVAVYSTGYIHHDRRAG--------GYWFFLLLMCGSLSGLAL 329 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAA 191 + + + E T SS FLV + AA KY ++C G L G +L+ A A Sbjct: 330 ARDFGGFYVFWELMTFSSYFLVAHEATDKAFHAAVKYFVMCVAGACAMLPGFMLLSAQAG 389 Query: 192 SVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPS 251 ++ A + + ++ A V +GF K GL P H WLPDAH APS Sbjct: 390 TLDFAALAGLAATLPA--------PVVKGAVVLAFVGFAVKAGLVPGHGWLPDAHPAAPS 441 Query: 252 PVSALLSAVLLNCALLVLIRYYIIICQ----------AIGSDFPNRLLLIFGMLSVAVAA 301 +S LS +L + +R + + A G L+ G ++ Sbjct: 442 SISGPLSGILTKTGVYGTVRLMLAVFGSAVLLKAGESAGGFSSMGLLVTALGTATMLYGE 501 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 L Q D+KRLLAYS++ +G + + +G+G L +LLH+LNH++ K LLF +G + Sbjct: 502 LMALKQDDLKRLLAYSTMGQVGEIFMVIGLGTWLATTGSLLHVLNHAIMKNLLFLCAGGL 561 Query: 362 LLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLI 421 +L+ G++ L + GM ++MPFTA G +++ G+PPFN F+ +++ + A +A H + Sbjct: 562 ILRAGSKKLADLAGMARVMPFTAGCMVVGLISIMGLPPFNGFVGKYLMLQALVAAGHPAV 621 Query: 422 IVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTH--- 478 +LLL +R+ R L+ +P + +L + L +G Sbjct: 622 AAVLLLGSLAGCVYYMRIV-RTLVFQPYTGPMVQEAPVSMRVATGVLAALCLVLGVLPQL 680 Query: 479 ---IPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFL 512 + PV +LAGA + LP TWH F+ Sbjct: 681 GLSLVTPVADMLAGAGKL---DAQALPMLAVTWHPFV 714 Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats. Identities = 119/495 (24%), Positives = 216/495 (43%), Gaps = 46/495 (9%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 +V + +L P+L +++ F R+ R +A + + ++ +++ Sbjct: 706 LAVTWHPFVLVPMLGAVVPFLLRRDRKAAGLSTAITLAVAAIAVVVFGRG---------- 755 Query: 63 IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 +D + F ++ VIG L Y++GYM H T +Y FF Sbjct: 756 ---------LDSISFAFALVVPVIGCLNMFYAVGYMEH--------SHTQWRFYTFFLFM 798 Query: 123 LFTMLLVVTSNNLIVMWAAIEATT-LSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLF 181 + ++ V SN+L + E + S F++ ++L +KY +G AF Sbjct: 799 VGGLMGVAASNDLFGFFTFWEIMSSWSLYFVIVHEENPAALREGFKYFFFNVLGAAFLFL 858 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 G V++ + A + V + L A + IGF K P Sbjct: 859 GVVMLSSMAGD--------PSFGAVRSALPTMPVALAATAVALMAIGFTMKAAQLPFRID 910 Query: 242 LPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAI---------GSDFPNRLLLIF 292 + + AP+PVS +S+VLL AL L + + ++ A G + Sbjct: 911 VQMHPATAPTPVSGYISSVLLKSALFGLAKLFFVLGGAGFFTGLASQWGQPQVMYAIAWV 970 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G +++ +AA ++Q D+K +L YS+V +G + V + +G PLG+ +LH++NH L K Sbjct: 971 GGITIVMAALLAVMQSDLKLVLIYSTVSQLGYMVVGVALGTPLGMAGGMLHLVNHVLFKD 1030 Query: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LLF +G+++L L+ + G+ + MP T +F GAL++ G+PP N F S+++ A Sbjct: 1031 LLFLVAGSLILCTHKHSLDELGGIGQRMPVTLTMFAIGALSVVGVPPTNGFASKWILYHA 1090 Query: 413 GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP-PQAVNRGDLGWLTTSPMVILLVM 471 +A + + +L L L LA + + +P P+ + + + PM IL Sbjct: 1091 LMAEGEVALALLSLAGSVLTLAYFAKFLHSAFLGRPSPELAHVHEAPRIMLVPMGILAAG 1150 Query: 472 MLAMGTHIPQPVIRI 486 + G P++ I Sbjct: 1151 CIITGVFPGLPLLAI 1165 >UniRef50_Q7UXC2 NADH dehydrogenase/oxidoreductase n=1 Tax=Rhodopirellula baltica RepID=Q7UXC2_RHOBA Length = 492 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 121/469 (25%), Positives = 222/469 (47%), Gaps = 19/469 (4%) Query: 17 FSLLCFACRKRRLSATRTVTV---LHSLGITLLLILALWVVQTAADAGEIFAAGLWLHID 73 + LC +R + T + V ++ I L+ ++ V G G+ +D Sbjct: 16 AAPLCVIVHQRTAAYTLALVVSWITFAISIALVAQVSQTGVIRYNLGGWAPPYGIEYLVD 75 Query: 74 GLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSN 133 L + + IG + +Y+ + E+A + +Y + L L ++ + + Sbjct: 76 SLSSFVMMFVSGIGAIVLVYAPKSVDDEIARSKHY-----LFYATYLLCLTGLMGMCVTG 130 Query: 134 NLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASV 193 +L ++ +E ++LSS L+ + R + AA++Y+II ++G F L G L+Y ++ Sbjct: 131 DLFNVFVFLEISSLSSYALISLGQTRRAPLAAFQYLIIGSIGATFILIGIGLLYQMTGTL 190 Query: 194 MPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPV 253 A E P +L+AF FL+IG K +FP+H WLP+A++ APS V Sbjct: 191 NMADIAARVPHE-------NGPRTVLVAFGFLVIGLCVKMAVFPLHTWLPNAYTYAPSVV 243 Query: 254 SALLSAVLLNCALLVLIRY-YIIICQAIGSDFP--NRLLLIFGMLSVAVAAFFILVQRDI 310 + ++A ++ IR + II D+ + L I ++ + VA+ + Q ++ Sbjct: 244 TCFIAATATKVSVYAFIRVIFGIITPGFAFDYLPLDTELTILALVGIFVASTAAIYQANV 303 Query: 311 KRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDL 370 KRLLAYSSV +G + + + + P G+ A ++H+ NH+L K LF G L+ G+ L Sbjct: 304 KRLLAYSSVAQIGYMILGISMSTPGGLTAGIVHMFNHALIKGGLFMIVGCFALRLGSVKL 363 Query: 371 NVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLT 430 + G K MP+T++ + G LAL G+P F+S+++ +TA + + + VL+LL Sbjct: 364 DDWKGAGKTMPWTSLGWAIGGLALIGVPVTAGFISKWLLLTAAMEKGMWPVAVLMLLSSL 423 Query: 431 LVLAGLVRMAARVLMAKPPQAV-NRGDLGWLTTSPMVILLVMMLAMGTH 478 L + + R+ + ++P V + P ++L G Sbjct: 424 LAVVYVWRVVETLYFSEPTAKVLQAKEAPLGMLIPTYVVLAGTFVFGVW 472 >UniRef50_Q2YA95 Proton-translocating NADH-quinone oxidoreductase, chain L n=64 Tax=Bacteria RepID=Q2YA95_NITMU Length = 662 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 111/511 (21%), Positives = 209/511 (40%), Gaps = 42/511 (8%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI-- 63 + L+ PL LL + + S+ ++ L+ + + + A Sbjct: 4 LLWLIPTLPLAGFLLLVLGGNHLGHRSIAMIGTGSVALSALVAILIGIDFITAPPPGFVF 63 Query: 64 ------------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 F+ G+ ++D L + + ++ VI FL +YS +M + + Sbjct: 64 RQEAWTWIAVAGFSPGIVFYLDALSLVMVVVVTVISFLIHLYSTEFMSGDEGY------- 116 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYII 170 ++ + +LF+ +M ++V ++NL+ ++ E L S L+G + ++ AA K I Sbjct: 117 -ARFFAYMNLFVGSMCILVLADNLLFLYLGWEGVGLCSYLLIGFWYRDPANGRAARKAFI 175 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 + VG G L++ + ++ Q M E S L LL Sbjct: 176 VTRVGDTAMAIGFFLLFTHLGTLDIQPLMQRATQEWPVGSELAILAAALLLGGA-----A 230 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ P+ WLPDA + P+PVSAL+ A ++ + ++ R + + A F + Sbjct: 231 GKSAQLPLQTWLPDAMA-GPTPVSALMHAATMVTAGVYLIARTHALFVLAPAVQFA---V 286 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 G L++ +A F L Q DIKR+LAYS++ +G + + LG+G AA+ H++ H+ Sbjct: 287 AAVGALTLLLAGFSALAQNDIKRVLAYSTISQLGYMFLALGVG---AWSAAIFHLVTHAF 343 Query: 350 AKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPP-FNIFLSEF 407 K LLF +G V++ D+ + + K +P T F G+ +LA +P F S+ Sbjct: 344 FKALLFLSAGVVIMSLHEEHDIFRMGALRKKLPVTFWTFLIGSASLAALPLVTAGFYSKD 403 Query: 408 MTITAGLAR--NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR--GDLGWLTTS 463 + + + + + L + R+ V + G T Sbjct: 404 LILWQAWSSRGGNPWLWAAGWGGAILTGLYIFRVVFLVFFGEARTVAPPEIRRPGRRITV 463 Query: 464 PMVILLVMMLAMGTHIPQPVIRILAGASTIV 494 P+++L + G + L S + Sbjct: 464 PLIVLAAFSVVGGWIETPSFLGNLTLFSDFI 494 >UniRef50_Q609T5 Hydrogenase subunit n=1 Tax=Methylococcus capsulatus RepID=Q609T5_METCA Length = 748 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 152/523 (29%), Positives = 246/523 (47%), Gaps = 45/523 (8%) Query: 26 KRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGV 85 +R + A T + + SLG LL + A V G + + +D L FL +LG+ Sbjct: 105 RRMVFALLTASGVSSLGAGLLQLHADAAVSGQLPFGLPWLHW-HVRLDTLSAFFLVVLGL 163 Query: 86 IGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEAT 145 G+Y GY R + L F F+ M V+ +++ + A EA Sbjct: 164 GVIAAGVYGPGYTRQFAGQYSFGALGL-----FTGSFVAGMEGVLIADDAYLFVIAWEAM 218 Query: 146 TLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWS 204 T+SS FLV + +S AA+ Y+++ VG + ++ A + S A Sbjct: 219 TVSSYFLVVYQHEHASHRRAAFLYLLMGEVGAIAIILAFGILAAASHSFAFDAW------ 272 Query: 205 EVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNC 264 + + + P AF+ L GFG K GL P+HAWLP+AH AP+ VS L+S V+L Sbjct: 273 ----RDAHVTPAWGTAAFLLALAGFGMKAGLVPLHAWLPEAHPAAPAHVSGLMSGVMLKI 328 Query: 265 ALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGL 324 A+ L+R+ + + + ++L G S A+ + +VQ D+KRLLAYSS+ENMG+ Sbjct: 329 AVYGLLRFAFDLLGDVQW-YWGAIVLGLGTGSAALGILYAVVQSDLKRLLAYSSIENMGI 387 Query: 325 VAVELGI-----------GGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVV 373 V + LG+ G +G+ AAL H+LNHSL K LLF +G+V+ + DL + Sbjct: 388 VFMGLGLCMVFIGKGHVQLGLIGLVAALYHVLNHSLFKNLLFLAAGSVVHQTHRHDLEHM 447 Query: 374 CGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL-----------II 422 G++K MP TA LF G++A+AG+PP N F+SE++T A L ++ Sbjct: 448 GGLIKRMPVTAGLFLAGSVAIAGLPPLNGFVSEWLTFQAALQAASVIDNGILRSMVSVAA 507 Query: 423 VLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMV---ILLVMMLAMGTHI 479 +L + A V++ + +P + + + + +L + L +G + Sbjct: 508 AILAFTAAVAAACFVKLYGVAFLGQPRERRSAHAHEVSHSGMLWAPAMLAGLCLLLGV-L 566 Query: 480 PQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEK 522 P V+ + + +L T + R W P G ++ S Sbjct: 567 PTWVLDAMRPITRQLLGETLTSASARG-WLWLTPGGVSTASYS 608 >UniRef50_A5GD02 Proton-translocating NADH-quinone oxidoreductase, chain L n=7 Tax=Geobacter RepID=A5GD02_GEOUR Length = 666 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 112/440 (25%), Positives = 200/440 (45%), Gaps = 30/440 (6%) Query: 31 ATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLT 90 V+ + SL + L V + A F A + L++D L + + ++ + L Sbjct: 37 GVVWVSFVCSLSAFVAYRAPLKVELGSWLAAFDFKAPITLYLDPLSLVMVLMITFVCGLI 96 Query: 91 GIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSA 150 +Y++GYM + + ++ +LF+F ML++V + NL +++ E S Sbjct: 97 HVYAVGYMADDPDY--------ARFFALLNLFVFAMLVLVLAENLPLLYLGWEGVGFCSY 148 Query: 151 FLVGIYGQRS-SLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQ 209 L+G + + + A K I+ +G V ++ ++V +E+ Sbjct: 149 ALIGFWYREEKNATAGRKAFIVTRIGDTAFGIAVVWMFQLFSTVSI--------TELNGL 200 Query: 210 SSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSA-LLSAVLLNCALLV 268 L+ ++ + LLIG K+ P+ WLPDA + P+PVSA + +A ++ + + Sbjct: 201 GFLMPAGVITALGLLLLIGAMGKSAQLPLMVWLPDAMA-GPTPVSAQIHAATMVTAGVYL 259 Query: 269 LIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVE 328 L R + +I S + + G L+ AA L QRD+KR+LAYS++ +G + + Sbjct: 260 LARMFPLIG---ASATVQGAIALTGGLTAFYAASCALAQRDLKRVLAYSTISQIGYMMLG 316 Query: 329 LGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLF 387 +G G I AA H+L H+ K LLF +G V+ + +D+ + G+ + +P T F Sbjct: 317 VGCG---AITAATFHLLVHAFFKALLFLAAGCVITALHHEQDIFRMGGLRRNLPLTFWPF 373 Query: 388 GGGALALAGMPPFNIFLSEFMTITAGL---ARNHLLIIVLLLLLLTLVLAGLVRMAARVL 444 GA+ LAG+P F S+ +TA + + +L L L RM V Sbjct: 374 LAGAVCLAGLPLTGGFFSKDAILTAAWGKGGLLYGGLYLLGLFTALLTSVYTFRMVYLVF 433 Query: 445 MAKPP-QAVNRGDLGWLTTS 463 +G LGW++T+ Sbjct: 434 GGTQQIPPFEKGGLGWISTA 453 >UniRef50_C6HVM6 Putative hydrogenase-4 subunit (HyfF) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVM6_9BACT Length = 491 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 169/495 (34%), Positives = 267/495 (53%), Gaps = 6/495 (1%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF 64 ++ L++L+P+ +++ R+++ + L++ + + G + Sbjct: 1 MILVLMILSPITGAIVLGLWGHRKIAPLLNIAFSLLTFFLTLILG-----EEVSLHGPLV 55 Query: 65 AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLF 124 A L D LFL I G + T +S+ YM E +HG L+P Y + +F+ Sbjct: 56 ALDENLFADTFSSLFLVITGGVAATTSFFSLRYMTIEASHGRLTPERTRLYLALYQIFVL 115 Query: 125 TMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTV 184 TM++V+ SNNL ++W A+E TL++ LVG ++++A+WKY I+C VG+A LFGT+ Sbjct: 116 TMIVVLASNNLGLLWVALEGATLATVLLVGWTRTPAAIKASWKYFILCGVGIAQALFGTI 175 Query: 185 LVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 L+Y + + A+ + + S L+PT+M LAFVF ++G+GTK GL P+H WLPD Sbjct: 176 LLYFASEKTLGPGGTALLLTHLETVKSQLEPTVMSLAFVFFMVGYGTKVGLVPLHNWLPD 235 Query: 245 AHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFI 304 AH+E P+P+SA+LS +LLN AL ++R + AI S P+ LL+ FG+ SV +A+ + Sbjct: 236 AHAEGPTPISAVLSGLLLNVALYAILRVKSLADGAIHSSMPSNLLMGFGLASVLLASISM 295 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK 364 ++DIKRL AYSS+E+MGL + GIGGPL FA LLH+ HSL K+ +F G+++ Sbjct: 296 WKRQDIKRLFAYSSIEHMGLATLAFGIGGPLATFAGLLHMTTHSLVKSAIFFAVGHIVQT 355 Query: 365 YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVL 424 G++ + + + P A G A+ G+PPF +F SE + IT + R + L Sbjct: 356 SGSQKIPSIREVALRTPGLARALLAGGFAITGLPPFALFASELLIITEAVKRIPFAVPFL 415 Query: 425 LLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVI 484 LL L + R+ L LT P+ I L + L +GT P + Sbjct: 416 LLALFVTFGVLIFRILEISEGGPSMTTKPLPPLPKLTFFPIWIHLGLALILGTVFPATLY 475 Query: 485 RILAGASTIVLSGTH 499 + A +VL G H Sbjct: 476 SVYQKAL-LVLGGPH 489 >UniRef50_C0QBF3 HyfB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBF3_DESAH Length = 655 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 150/507 (29%), Positives = 235/507 (46%), Gaps = 49/507 (9%) Query: 5 VMFALLLLTPLLFSL-LCFACRKRRLSATRTVTVLHSLGITLLLIL-ALWVVQTAADAGE 62 V+FA ++ L ++ L F R +R + + L + + + A+ Sbjct: 2 VLFAGAMIVFLAGAVFLPFLGRSKRANTAGALFALAGSVMAMAASIDAITRDGFDLVLPW 61 Query: 63 IFAAG-LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 F G L L +D L G F ++ ++ + IY YM L + + + Sbjct: 62 KFLLGSLHLRMDPLSGFFGLVICLVSGFSAIYGARYMDAYAGKKHLGIA-----WSLYLI 116 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVGVAFGL 180 +M+LV+T+ N ++ A E ++SS LV QR + +A W Y++ +G A L Sbjct: 117 LTASMMLVITAWNGVLFLIAWEIMSVSSFLLVIFEFQRPGVLKAGWIYLVATHLGTALLL 176 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 +++ N A + T L F+ +IGFGTK GL P H Sbjct: 177 VMFMVMGKNNAYDFNLVQ--------------ASSTGASLVFILAVIGFGTKAGLLPFHV 222 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 WLP+AH APS VSA++SA ++ + +IR ++I S L+I G ++ Sbjct: 223 WLPEAHPAAPSHVSAVMSAAMIKTGIYGIIRICMLIGPPKAS--WGWTLIIIGAMTGIFG 280 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSL 349 L Q+DIKRLLAYSSVENMG++ + LG+G G LGI +LH+LNH+L Sbjct: 281 VMSALAQQDIKRLLAYSSVENMGIICIGLGLGFLALSTGHPFIGALGISGGMLHVLNHAL 340 Query: 350 AKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 K+LLF G+G+VL TRD+ + G++K MP T F + A+ +PP N F+SEF+ Sbjct: 341 FKSLLFFGAGSVLHSTHTRDMEKMGGLMKSMPVTGTTFVIASAAVCALPPLNGFISEFLI 400 Query: 410 ITAGLAR-----------NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP--QAVNRGD 456 + +L+IV L L+ L LA + A V P +A + + Sbjct: 401 YFGAFSSLYASKGTFSVLAGILVIVSLALIGGLALACFSKAAGIVFSGHPRSSEARDAHE 460 Query: 457 LGWLTTSPMVILLVMMLAMGTHIPQPV 483 PM++L + L +G P + Sbjct: 461 SPLAMGIPMIVLAGLCLLVGIFSPLVI 487 >UniRef50_Q9UYN2 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3 n=1 Tax=Pyrococcus abyssi RepID=Q9UYN2_PYRAB Length = 647 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 130/491 (26%), Positives = 216/491 (43%), Gaps = 33/491 (6%) Query: 15 LLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDG 74 L L+ F + + V + L + V G++ GL ++IDG Sbjct: 6 LALPLVLFILGMLGGLSKKAFKVSSAFAALASLSIVALVFNLKPVEGKLL--GLPVYIDG 63 Query: 75 LGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNN 134 +F+ ILG++GF +YSI YM E P Y ++ FL +M L++ ++N Sbjct: 64 FSLIFMLILGILGFSASLYSIPYM-------ERHPGKEWVYAVAYNAFLLSMFLILITSN 116 Query: 135 LIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLF-GTVLVYANAASV 193 L+ E TLSS L+ + KY I + F LF + Y+ S+ Sbjct: 117 LVWFVFFWELMTLSSFILITW--DEKDFDPGIKYYIAMHILTTFPLFISLGVSYSFLGSL 174 Query: 194 MPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPV 253 L + LL + LI F K+G+ P H W+P + APS + Sbjct: 175 DAMT---------YPNLKSLPSSATLLLYASFLIAFMAKSGIVPFHFWVPSTYKVAPSNI 225 Query: 254 SALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRL 313 S+LL+ + A+ LIR S L+ + G +++ V + L + D K+L Sbjct: 226 SSLLAGAMEKIAVFGLIRIMYTALPTPKS--IGYLVALLGAVTLTVGTLYALRESDAKKL 283 Query: 314 LAYSSVENMGLVAVELGIG-------GPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG 366 LAY S+ MG + + +GIG G LG+FA + H LNHSL K LF +G+V G Sbjct: 284 LAYHSIGQMGYIWLGIGIGLSLDSPLGALGMFAGIFHALNHSLFKGSLFLSAGSVEYATG 343 Query: 367 TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLI---IV 423 +L+ + G+ + M +T + +LA++G+PPFN FLS+++ TAG +++ V Sbjct: 344 ETNLDNLGGLAERMKWTGLATLLASLAISGVPPFNGFLSKWLIYTAGYNSGDMVLSFGAV 403 Query: 424 LLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPV 483 L + + + LA ++ + + + ++ P +IL + L +G V Sbjct: 404 LAVFISAVTLASFIKFYTSQFGGESERYRDVSEVPLSMVVPQLILSSLCLIIGIFPALVV 463 Query: 484 IRILAGASTIV 494 I + Sbjct: 464 PLINEPIGAPI 474 >UniRef50_A1SE38 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Actinomycetales RepID=A1SE38_NOCSJ Length = 643 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 125/522 (23%), Positives = 225/522 (43%), Gaps = 45/522 (8%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE--- 62 + L++ PL + + + + L + ++ +L L L+ D G+ Sbjct: 23 LLWLVVALPLAGAAILLVGGRYTDKWGHLLGTLLPV-VSFILSLVLFFDLLGRDEGDRQF 81 Query: 63 -----------IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 G+ L D L LFL ++ +G L +YSIGYM H+ Sbjct: 82 NQHVFTWFQTGHLDVGMDLLYDPLSALFLLLITGVGSLIHVYSIGYMAHDPRRR------ 135 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAA-WKYII 170 ++G+ +LF+ MLL+V S N + ++ E L+S L+G + R S AA K + Sbjct: 136 --RFFGYLNLFVAAMLLLVLSENYLGLFLGWEGVGLASYLLIGFWQHRPSAAAAGKKAFV 193 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 I VG ++ Y S ++ + + T + + + LL+G Sbjct: 194 INRVGDMGMSTAIMMFYVTFGST--------SFTVISANAPGASDTQLTILGLLLLLGAC 245 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ FP+ AWL DA E P+PVSAL+ A ++ + +++R I A + Sbjct: 246 AKSAQFPLQAWLLDAM-EGPTPVSALIHAATMVTAGVYLIVRSNFIFEAA---PHAQTAV 301 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 ++ ++S+ A + DIK+ LA S++ +G + + G+G F A+ H+L H Sbjct: 302 VVVALISILWGAAIGCAKDDIKKGLAGSTMSQIGYMMLGAGLGAAGYAF-AIFHLLTHGF 360 Query: 350 AKTLLFCGSGNVLLKYGTR-DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 K +F G+G+V+ D+ + K+MP T + F G LA+ G P F+ F S+ Sbjct: 361 FKANMFLGAGSVMHGMNDDVDMRHYGALRKMMPVTFLTFAMGYLAIIGFPGFSGFWSKDK 420 Query: 409 TITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP---PQAVNRGDLGWLTTSPM 465 I LA ++ L+ + ++ + + RM + V+ + + T P+ Sbjct: 421 IIETALA-DNWLVGLCAIIGAGVTGFYMTRMMLMTFFGDDRRWEKDVHPHESPSVMTVPL 479 Query: 466 VILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRST 507 V+L + + G + I+ + +V G HD P + Sbjct: 480 VVLAALSVLGGLMLAGDWIQ--DFLAPVVGVGAHDDPPVPAL 519 >UniRef50_B1I6I5 NADH-quinone oxidoreductase subunit N n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=NUON_DESAP Length = 501 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 127/507 (25%), Positives = 227/507 (44%), Gaps = 34/507 (6%) Query: 4 SVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLH------SLGITLLLILALWVVQTA 57 + + L+++ PL ++ + + TR + S + L L Sbjct: 3 AHLPILIVIIPLFVAMAARLLVRLSVPFTRGFVLAAALAVLASGAVALAETLVRGEPWRY 62 Query: 58 ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 +G G+ L ID L G + ++ G +Y+ Y++ +P +Y Sbjct: 63 YVSGWPPPWGIELVIDPLAGGLIVLVAFFGLAALVYAGPYLQG------RTPREQGSFYA 116 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVA 177 F L +L + + +L ++ +E ++L++ L+ G R S+ AA +Y+II T Sbjct: 117 LFLLAKAGLLGMCATGDLFNLYVFLEISSLAAYALIAF-GGRRSIVAALRYLIIGTAAAC 175 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 F L G +YA S+ + L+D +++LA VF++ G G K LFP Sbjct: 176 FYLLGVGYLYAMTGSLN-------MADLAVLLPPLMDSPVVILALVFIVAGLGIKMALFP 228 Query: 238 MHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPN-RLLLIFGMLS 296 +H WLPDA+S P+PV A ++AV+ + L R + +A G P ++L Sbjct: 229 LHGWLPDAYSYTPAPVLAFMAAVMTKVSAYALYRILYFVTEAAGPVSPTLQVLGWMAAAG 288 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + + + QRD+ R+LAYSSV +G + + L +G L ++ ALLH+L+H+L K LF Sbjct: 289 ILFGSIMAIAQRDLWRMLAYSSVAQVGYIVLGLAVGNVLALYGALLHVLSHALVKGGLFF 348 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 +G V + G R ++ G+ K MP T F AL++ G+PP F S++ + L Sbjct: 349 IAGGVSWETGVRRVSDFVGIAKKMPLTMGAFVAAALSMIGLPPTLGFFSKWYLVLGCLEA 408 Query: 417 NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRG-------------DLGWLTTS 463 + + +L++ L R+ + PQ R +L Sbjct: 409 GAWVFVAVLVVSSLLTAVYFFRVIENAYLKGLPQPGARAERPVPPGARRFRLELPASMLV 468 Query: 464 PMVILLVMMLAMGTHIPQPVIRILAGA 490 P+++L + ++ +G Q + ++ A Sbjct: 469 PILVLGIGVVVLGLFNEQIISNVIQYA 495 >UniRef50_D1A433 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Streptosporangineae RepID=D1A433_THECD Length = 698 Score = 307 bits (788), Expect = 6e-82, Method: Composition-based stats. Identities = 120/477 (25%), Positives = 202/477 (42%), Gaps = 44/477 (9%) Query: 23 ACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAG------LWLHIDGLG 76 + + + + + + L++ +A+W L L +DGL Sbjct: 113 GLPRNGPALIACLPMAVATVLALIVAVAVWRHPGVRTGTLTLIPTGTIDIALGLRVDGLA 172 Query: 77 GLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLI 136 L ++ + +YS+ YM + + Y F LF MLLVV S +L+ Sbjct: 173 ALVALMVCGVALAVQLYSVAYMAEDRRY--------SSYAAFISLFTAAMLLVVYSGDLL 224 Query: 137 VMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMP 195 V++ E + S FL+G + +R++ AA K +I +G L G ++ A + Sbjct: 225 VLYVGWEVMGVCSYFLIGHHWQERANSRAAVKAFLITRLGDVGFLIGIFVLGVGAGTFSI 284 Query: 196 QAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSA 255 VL++ L + A + LL G K+ FP+H WLPDA + P+PVSA Sbjct: 285 GG--------VLERLPDLPQGTVTAATLLLLAGVAGKSAQFPLHTWLPDAMA-GPTPVSA 335 Query: 256 LLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLL 314 L+ A ++ + V+ R Y + + +L + ++S+ +A L Q D+KR+L Sbjct: 336 LIHAATMVAAGIYVVARLYAAFAASAAA---LTVLGVLAVISMLGSALAALAQDDLKRVL 392 Query: 315 AYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVC 374 AYS++ + +A L +G P+ AA+ H++ H K LLF +G+V+ G+ L Sbjct: 393 AYSTISQLACMAAGLAVGAPV---AAIFHLVAHGAFKALLFLAAGSVIFVTGSGLLRRHG 449 Query: 375 GMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN-------------HLLI 421 G+ + MP T G AL G+PP + F S+ + A LI Sbjct: 450 GLRRAMPVTFWAMTIGYAALVGLPPVSGFFSKDAIVGAAWHAAAHGERPAHLPGGVAWLI 509 Query: 422 IVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTH 478 + LL + + A R +P A + L T P+ L V +G Sbjct: 510 CLALLATVAVTAAYATRAWLMTFFGEPRAAFPAREAPPLMTWPVAALAVPAALLGFF 566 >UniRef50_Q4UWA7 NADH-ubiquinone oxidoreductase NQO12 subunit n=52 Tax=cellular organisms RepID=Q4UWA7_XANC8 Length = 727 Score = 307 bits (787), Expect = 8e-82, Method: Composition-based stats. Identities = 110/471 (23%), Positives = 200/471 (42%), Gaps = 44/471 (9%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI-- 63 + ++L PL+ S++ R + + LG+ + +L+ + + G Sbjct: 9 LLIAVVLAPLVGSIVAGLFG--RQVGRKGAQYVTILGVAVSCVLSCLTLYQLVELGASPF 66 Query: 64 ------------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 ++A + +D L + + ++ + L IY+IGYM + + Sbjct: 67 NQNLYTFFDVGNYSAHVGFMVDRLTAMMMVVVTFVSLLVHIYTIGYMEEDPGYQ------ 120 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYII 170 ++ + LF F+ML +V SNN + ++ EA L S L+G + +R ++ A K + Sbjct: 121 --RFFSYISLFTFSMLTLVMSNNFLQLFFGWEAVGLVSYLLIGFWFKRPTAVFANMKAFL 178 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDP---TLMLLAFVFLLI 227 + VG + G V S+ A + + L ++M L + L I Sbjct: 179 VNRVGDFGFILGIAGVLLWFGSLDYSTVFANATTMAGAKVQLFAGHEWSVMTLICICLFI 238 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPN 286 G K+ P+H WLPD+ E P+P+SAL+ A ++ + ++ R + S+ Sbjct: 239 GAMGKSAQVPLHVWLPDSM-EGPTPISALIHAATMVTAGIFMVARMSPLFE---LSETAL 294 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 +L G + +VQ DIKR++AYS++ +G + V LG+ AA+ H++ Sbjct: 295 NFILFIGATTAFFTGLIGIVQNDIKRVVAYSTLSQLGYMTVALGVS---AYSAAVFHLMT 351 Query: 347 HSLAKTLLFCGSGNVLL-KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 H+ K LLF +G+V++ + +D+ + G+ K M T G LAL G P F+ F S Sbjct: 352 HAFFKALLFLAAGSVIIGMHHEQDMRKMGGLRKYMKVTYWTSVIGTLALVGTPFFSGFYS 411 Query: 406 EFMTITAGLARNHLLIIVLL-------LLLLTLVLAGLVRMAARVLMAKPP 449 + I A H + L + + R+ K Sbjct: 412 KDTIIEAAAHHAHESHSWIATYGYWAVLGGVLVTSFYSFRLLFLTFHGKER 462 >UniRef50_Q3AB32 Carbon monoxide-induced hydrogenase, membrane anchor subunit n=2 Tax=Clostridia RepID=Q3AB32_CARHZ Length = 1274 Score = 307 bits (786), Expect = 9e-82, Method: Composition-based stats. Identities = 127/456 (27%), Positives = 220/456 (48%), Gaps = 27/456 (5%) Query: 53 VVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 ++ ++ L + D L F ++ IGFL +YS+GY + + Sbjct: 265 ILAVGITGTTVYLTWLAGNFDSLSKFFALLMAFIGFLVTLYSVGYFKAKPYAN------- 317 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIIC 172 Y+ F L L T+L + TS L + E T +S FLV + +L A +KY I+C Sbjct: 318 -RYFFFLLLMLGTLLGLTTSKELGNFYVFWELMTWTSYFLVIQEQTQKALRAGFKYFIMC 376 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTK 232 T G L + ++ S+ A +L P LML+ +IGFG K Sbjct: 377 TSGAYIMLLAILTLHVKLGSLDLTTISANL--------QVLSPGLMLVVLGMFIIGFGVK 428 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIG---------SD 283 GL P+H+WLPDAH APS +SA +S +L + L+R ++ Sbjct: 429 AGLVPLHSWLPDAHPVAPSSISAPMSGILTKTGIYGLVRILFVVFGVSLLTKVGTTGQFS 488 Query: 284 FPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLH 343 ++ + G ++ L+Q D+K++LAYS++ +G + + LG+G L AL H Sbjct: 489 TIGFIISLLGAFTLLYGEIMALLQTDVKKMLAYSTMAQVGEIVITLGVGTYLSFIGALYH 548 Query: 344 ILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 ILNH++ K LLF G ++L+ ++++N + G+ ++MP T++ F G LA+ G+PPFN F Sbjct: 549 ILNHAIMKNLLFLAVGALILRVKSQEINKLKGIGRVMPVTSLCFSIGILAIMGLPPFNGF 608 Query: 404 LSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTS 463 +S+F+ + A + HL + L+LL L +++ + + + R + Sbjct: 609 ISKFLMLYALVQSGHLALAGLILLGSILGGFYYLKVVRIIFF-EKYEGPARQEAPITMLI 667 Query: 464 PMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTH 499 P+VIL + + G + PQ + ++ + ++ + H Sbjct: 668 PIVILTGLSIFNGVY-PQAGLALIKPVADLIAANGH 702 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 129/502 (25%), Positives = 221/502 (44%), Gaps = 57/502 (11%) Query: 4 SVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI 63 ++ + ++ L P++ +L + +R + + + V + + A Sbjct: 712 TISWPIVTLIPMVGALFAYFFGRRSVKVSGWLAVATMVATLATVFAASTG---------- 761 Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 +D F ++ IG L +YS+GYM HE A +Y FF L + Sbjct: 762 --------LDIFSRSFAFLIAFIGVLNLLYSLGYMEHEHAQN--------RFYLFFTLMI 805 Query: 124 FTMLLVVTSNNLIVMWAAIEATT-LSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFG 182 +L V S +L +A E + + F++ +L +KY I VG L G Sbjct: 806 GGLLGVAVSKDLFNFFAFWEIMSSWTLYFVIIHEETSEALREGFKYFIFNYVGANLLLLG 865 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM---- 238 +++ NA + SE+ + S L L+ L + +LIGF K + P Sbjct: 866 LLVLTVNAGTFE--------MSELAGRLSALPTGLVALGLILMLIGFAMKAAMLPFRIDY 917 Query: 239 --HAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPN---------R 287 H AP+PVS +S+VLL A +++ + + Sbjct: 918 QMHP------PTAPTPVSGYISSVLLKSAPFGMVKLFYVFGGVALLSKLGQLGDMPSLMY 971 Query: 288 LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNH 347 +L L++ +AA L+Q +KRLL Y +V MG + + + +G LG+ LLH++NH Sbjct: 972 ILAWVSGLTILMAAALALLQSGMKRLLIYHTVSQMGYIILGISLGSSLGLAGGLLHLVNH 1031 Query: 348 SLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 L K LLF +G +++K G DL+ + G+ + MP T +F G ++AG+PPFN F S++ Sbjct: 1032 MLFKNLLFLVAGAIMVKTGIGDLDRLGGIGRKMPVTLSVFAIGTFSIAGIPPFNGFTSKW 1091 Query: 408 MTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK-PPQAVNRGDLGWLTTSPMV 466 + A + + ++ + +L LL L LA ++ + P + N + W PMV Sbjct: 1092 LIYEASMEKGYVFLALLSLLASVLTLASFLKFLHSAFFGQIPKELENVTEAPWTMQIPMV 1151 Query: 467 ILLVMMLAMGTHIPQPVIRILA 488 IL V+ + G P+ I A Sbjct: 1152 ILAVLCMVFGIFPGIPLATIAA 1173 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 8/234 (3%) Query: 290 LIFGMLSVAVAAFFILVQ-RDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 +FG++ + V L++ +++ + L SS+ +G V + LG G +G ALLH+ Sbjct: 14 ALFGVMLLLVGELVALLRWKNLIQFLIISSIAEIGFVLLGLGTGTYVGTSGALLHLEYQI 73 Query: 349 LAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 + + L+F + + + + + + G+ + MP T LFG G ++ G+ PF +S+F+ Sbjct: 74 VMRGLVFLAAAAFIFRGHSASVEKLQGIGRKMPVTTTLFGFGLFSVMGLSPFKGSISKFL 133 Query: 409 TITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP----PQAVNRGDLGWLTTSP 464 I A + H L + + +++ + P P A + + Sbjct: 134 IIYAAIESGHWLSAAIATFGSIIEAVYFLQVFQILCFEDPVQEGPGAEEVRETSPGLMAV 193 Query: 465 MVILLVMMLAMGTHIPQPVIRILAGASTIVLSGT--HDLPAQRSTWHDFLPSGT 516 +++L V+ MG IP+P I A+ ++L GT LP S W + Sbjct: 194 LLVLGVLTALMGL-IPEPFIHGAERAAAVLLGGTGPDQLPVFESPWSSLVLVPY 246 >UniRef50_Q6MDQ5 Putative NADH-ubiquinone oxidoreductase chain L n=2 Tax=Parachlamydiaceae RepID=Q6MDQ5_PARUW Length = 628 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 131/490 (26%), Positives = 227/490 (46%), Gaps = 39/490 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILA-LWVVQTAADAGEIF 64 M L L PL+ L+ F +R +T + ++ + L+ L L+ A + F Sbjct: 4 MVGLGLFLPLIGFLILFTNSQRLSRSTTSFIGCSTILLAFLIFLGELYFYVHAGMNSQTF 63 Query: 65 AAGLWL-----------HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 WL H+D L L I+ +GFL +YS+GYM HE Sbjct: 64 PLYQWLTLNGIQVNFSWHLDSLSLLMTLIITGVGFLIHLYSVGYMDHEK--------DFT 115 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIIC 172 Y+ + F+F MLL+V + +L++++ E L+S L+G + Q+ + +AA K ++ Sbjct: 116 RYFACLNFFIFAMLLLVLAGDLLMLFIGWEGVGLASYLLIGFWYQKPSAAKAATKAFVVN 175 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTK 232 +G L G +L + + S++ KQ+ + ++ + + G K Sbjct: 176 RIGDLGFLLGLLLTLHTFGTTDIASI-----SQLAKQTFSIGAPIITVMTLLYFWGATGK 230 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLI 291 + P++ WLPDA E P+PVSAL+ A ++ + +++R + + S ++ I Sbjct: 231 SAQLPLYHWLPDAM-EGPTPVSALIHAATMVTAGIYLIVRTHTLFD---LSPLTLHVVGI 286 Query: 292 FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAK 351 G ++ A L Q D+KR+LAYS+V +GL+ + GIG +AA+ H+ H+ K Sbjct: 287 VGGMTALFAGLCALAQTDLKRVLAYSTVSQLGLMFLACGIG---AYYAAMFHLTIHAFVK 343 Query: 352 TLLFCGSGNVLL-KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 LLF +GNV+ Y T L + G+ KI T LF GAL+LAG+ PF F S+ + + Sbjct: 344 ALLFLSAGNVVHMMYDTTALEKMGGLSKIFTKTRWLFLIGALSLAGVFPFAGFFSKDLIL 403 Query: 411 TAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLGWLTTSPMV 466 G L+ + L+ L ++R+ +P + + + P+ Sbjct: 404 ELGYLSGSHLLFSMGLVASLLTGVYMLRVYCLTFHGEPRSTQQELSQVQEAPAMMVIPVS 463 Query: 467 ILLVMMLAMG 476 IL ++ + G Sbjct: 464 ILGLLSIVGG 473 >UniRef50_Q39QB8 NADH-plastoquinone oxidoreductase, chain 5 n=8 Tax=Deltaproteobacteria RepID=Q39QB8_GEOMG Length = 669 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 127/555 (22%), Positives = 229/555 (41%), Gaps = 57/555 (10%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI---- 63 L+ L PL+ ++ K+ + T + + L+ +++ + + E Sbjct: 6 WLIPLFPLIGVVINGLLGKKIKNETVIGGIGSLMVFGSFLVSFGILIELLSRSAEERVFE 65 Query: 64 -----------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 F A + ID L L + ++ +GFL +YSIGYM E Sbjct: 66 KVLFTWIKSGNFNAEIGFLIDPLSALMIMVVTGVGFLIHVYSIGYMHGEEG--------F 117 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIII 171 Y+ + +LF F+MLL+V NNL++M+ E L S L+G Y + S +A K ++ Sbjct: 118 YRYFTYLNLFTFSMLLLVLGNNLLLMFVGWEGVGLCSYLLIGYYFHKKSAGDAGKKAFVM 177 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 VG L G +Y + F L ++ + + +G Sbjct: 178 NRVGDFGFLLGVFTLYWYLGQNHNVWTIN-FRQLAANAHLLPVGGVVTVIALCFFLGATG 236 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ P++ WLPDA E P+PVSAL+ A ++ + ++ R + I S ++ Sbjct: 237 KSAQLPLYTWLPDAM-EGPTPVSALIHAATMVTAGVYMIGRLNFVY---IRSHETMMIVA 292 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 I G + AA Q DIKR+LAYS+V +G + + +G+G A + H++ H+ Sbjct: 293 IVGAATAIFAATIGTAQNDIKRVLAYSTVSQLGFMFLAMGVG---AFTAGIFHLMTHAFF 349 Query: 351 KTLLFCGSGNVLLKYGT-----------RDLNVVCGMLKIMPFTAVLFGGGALALAGMPP 399 K LF GSG+V+ +D+ + G+ K MP T + F +A+AG+P Sbjct: 350 KACLFLGSGSVIHSMHHALHHAHSHDDPQDMRNMGGLKKQMPITFLTFLVSTIAIAGIPG 409 Query: 400 FNIFLSEFMTITAGLARN-----HLLIIVLLLLLLTLVLAGLVRMAARVLMAK----PPQ 450 F+ F S+ + A ++++ + + R+ + Sbjct: 410 FSGFFSKDEILWQAFANPLHGDLNIILWATGAIAAGFTAFYMFRLVFMTFFGECRIVEKA 469 Query: 451 AVNRGDLGWLTTSPMVILLVMMLAMG-THIPQPVIRILAGASTIVLSGTHDLPAQRSTWH 509 + + + T P+++L ++ + G IP+ + + G + H L Sbjct: 470 KSHLHESPLVITFPLMVLGLLAVVGGYVGIPKLIGELFGGIPNYL---EHYLEPVFKGSE 526 Query: 510 DFLPSGTASVSEKHS 524 +F+ A + HS Sbjct: 527 EFMAQQLAHGAAHHS 541 >UniRef50_Q9PMA7 NADH-quinone oxidoreductase subunit L n=43 Tax=Epsilonproteobacteria RepID=NUOL_CAMJE Length = 596 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 115/479 (24%), Positives = 205/479 (42%), Gaps = 29/479 (6%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG---E 62 + + L +P + L + + ++ L L A + Sbjct: 4 LALISLFSPFVAFLFASCFALSEKKQFVGIICSLLVALSAFCSLYLLFCNEAFNVSLFEW 63 Query: 63 IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 ID + ++++G++ YSI YM H+ + ++ + LF Sbjct: 64 FAGVNFGFDIDAISLTMMSVVGIVATCVHFYSIFYMAHDEGFNK--------FFAYLGLF 115 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVGVAFGLF 181 +F+ML +V S+N + ++ E L S L+G + + + AA + I+ + L Sbjct: 116 VFSMLFLVMSDNFLGLFVGWEGVGLCSWLLIGFWYKNDTYSFAANEAFIMNRIADLGMLL 175 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 G +Y A ++ + EV + LD ++L L IG K+ FP H W Sbjct: 176 GIFWLYLQAGTL--------KYDEVFSMAQSLDHNALILIATCLFIGAMGKSAQFPFHTW 227 Query: 242 LPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 L DA + P+PVSAL+ A ++ + ++IR + + ++ + G A Sbjct: 228 LADAMA-GPTPVSALIHAATMVTAGVYLVIRASTLYDLVPEVSY---IIALLGAFVAIFA 283 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 A LV RD+KR++AYS++ +G + V G+G AL H+ H+ K+LLF G+GN Sbjct: 284 ASMALVVRDLKRIIAYSTLSQLGYMFVAAGLG---AYGIALFHLATHAFFKSLLFLGAGN 340 Query: 361 VLLKYGTR-DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 V+ + D+ + G+ K + TA+L G+LALAG+ PF F S+ + + H Sbjct: 341 VMHAMNDKLDIKKMGGLFKPLKITAILMCIGSLALAGIYPFAGFFSKDLILGYSFISFHH 400 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTH 478 I ++LL+ L R+ V + + + M L+V+ + G Sbjct: 401 GIFLVLLIAAFLTAFYSFRLLMLVFFTPARHDEHPHEASKIALLAMSPLMVLAIIAGFF 459 >UniRef50_C0A9K9 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9K9_9BACT Length = 821 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 125/496 (25%), Positives = 216/496 (43%), Gaps = 36/496 (7%) Query: 6 MFALLLLTPLL-FSLLCFACR---KRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG 61 + + + P + + FA R R V+ ++ + L + A QT + Sbjct: 4 LLIIAIFAPFVWLPVTAFAGRWLGSRTAWFALVAPVVSTVILAALALDARAGAQTVVEIP 63 Query: 62 EIFAAGL--WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 I + GL +DGL F ++ +G L +Y+ Y+ +Y + Sbjct: 64 WIPSLGLNLTFLVDGLSLFFALVVSGMGVLVALYAAAYLDDHYE-------WHGRFYAYL 116 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAF 178 LF+ ML V + NL++++ E T ++S L+G + + S A +++ + Sbjct: 117 LLFMGAMLGTVLAGNLLLLFVFWELTGIASFLLIGFLHDKEESRSGARMALLVTGLTGLV 176 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 L G L A + ++A ++ + L+ +AFV L +G K+ FP Sbjct: 177 MLAGVALTGIAAGTW----DLATLLAKGGEAFGPDSRGLLSVAFVLLAVGAMGKSAQFPF 232 Query: 239 HAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSV 297 H WLP+A + AP+PVSA L SA ++ + + R + I A D LL+ G ++ Sbjct: 233 HFWLPNAMA-APTPVSAYLHSATMVKLGVFFVARVFPIFSDA---DLWMPLLVTVGFGTM 288 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLG---IFAALLHILNHSLAKTLL 354 A+A+ F L+ D+K +LA+S+V +G++ G+G G + LLH+ +H K L Sbjct: 289 ALASLFALLSHDLKAILAWSTVTTLGMLIGFYGMGSRTGANGVQGDLLHVASHVFFKGAL 348 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 F +G + GTRD+ + G+ + +P+ AV+ A ++AG+P F+S+ + A + Sbjct: 349 FMCAGIIDHATGTRDVRELGGLRRRLPWLAVVVTICAASMAGVPGTLGFVSKEYFLKAQM 408 Query: 415 A------RNHLLIIVLLLLLLTLVL--AGLVRMAARVLMAK--PPQAVNRGDLGWLTTSP 464 A I + L L L L A R+ A V P + L P Sbjct: 409 AFLAQGGGGGWAIYAVGLAWLALTLKVAFSARLVAHVFWGPLTPGATEHFHAPARLMLVP 468 Query: 465 MVILLVMMLAMGTHIP 480 IL V + G Sbjct: 469 PAILAVACVLFGVWPA 484 >UniRef50_C0GJ30 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ30_9FIRM Length = 497 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 129/485 (26%), Positives = 229/485 (47%), Gaps = 16/485 (3%) Query: 5 VMFALLLLTPLLFSLLCFACRKR-RLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI 63 V+ L+L+ L RK +A T+ + LI + G Sbjct: 11 VLVLLVLMAAFLMPAFAHFGRKACGPAAVLTMVAAFIYSLHFALITRDGQTIAYSVMGWD 70 Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 G+ + I+ L ++ + + IYS+ + E + + YY F L + Sbjct: 71 APWGIEVIIEPFSAFMLLVISAVCLVIMIYSMSSLGRE-----IPASGIGWYYTTFLLLV 125 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGT 183 +M+ +V +N+L M+ IE T +++ LV G R + EA++KY+++ TVG F L G Sbjct: 126 GSMMGMVMTNDLFNMYVFIEVTGIAACALVLAKGGRLATEASFKYLLLATVGSGFVLTGI 185 Query: 184 VLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLP 243 L+Y ++ A F + P L+ F L+GFG K+ LFP+H WLP Sbjct: 186 ALIYVITGNLNISFVAAEFALVYPQY-----PYLIWTVLSFFLVGFGIKSALFPLHVWLP 240 Query: 244 DAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD--FPNRLLLIFGMLSVAVAA 301 DAHS AP+ SA+LS +++ ++ L ++Y I D F ++LI ++ + Sbjct: 241 DAHSSAPTTSSAVLSGLVVKAYIVALAKFYFQIFGFDLLDQIFIRHMILIMATGAILGGS 300 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 F VQ D+KR LAYSSV +G + + LG+ P+G+ A +LHI NH++ K LF +G + Sbjct: 301 MFAFVQLDLKRRLAYSSVAQIGYIFLGLGLSSPIGLAAGILHIFNHAVMKACLFLAAGAI 360 Query: 362 LLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLI 421 + G + +N + G+ MP T F AL++ G+P F+ F+S++ + + Sbjct: 361 YRQTGEKRVNRLQGLAFQMPITMFAFSIAALSMVGLPLFSGFISKWYLALGSIEAGMPMF 420 Query: 422 IVLLLLLLTLVLAGLVRMAARVLM---AKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTH 478 + L++L L + + + + + P+ + + +V+L + ++ G + Sbjct: 421 VGLIILSGLLNASYFLPIVWQAFFVVDEQEPKTFTMDKIPVSMSVSLVVLAMAVIYFGIN 480 Query: 479 IPQPV 483 P+ Sbjct: 481 PEFPL 485 >UniRef50_Q2RXM5 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM5_RHORT Length = 674 Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 147/515 (28%), Positives = 236/515 (45%), Gaps = 36/515 (6%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAA 66 FA+L P+L LL + S T + L + L + AL V A D G + Sbjct: 11 FAVLAALPVLT-LLAGNRKSLAGSITLVGVGVACLAMLGLAVTALTVGPIAFDLGTVPLF 69 Query: 67 GLW----LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 GL IDGL +F+ ++ V+G + +YS+GY+ H YY F LF Sbjct: 70 GLTSSLAFTIDGLSAIFVILISVLGTASALYSVGYIAHYPDE------DARRYYVPFPLF 123 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLF 181 + ML+V T+++ + E TL S FLV + +L A + Y + + + Sbjct: 124 IAGMLMVATTSDWFCFFFGWEFMTLVSYFLVTFENRDKENLSAGFIYFFMTQLTSMGLML 183 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 +++ S A ++ L +P + IGF TK G+FP+ W Sbjct: 184 AIIVLGTWGGSTSFAA-----VAKTLGALQAENPVALYGLLSLFFIGFATKAGMFPLGIW 238 Query: 242 LPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAI-GSDFPNRLLLIFGMLSVAVA 300 LP AH AP+ VSALLS V++ + ++R ++ + ++ +FG+LS+ V Sbjct: 239 LPKAHPAAPASVSALLSGVMIKLGIYGMLRIFLWALPLGEATHVWGMVITLFGVLSMLVG 298 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELG----------IGGPLGIFAALLHILNHSLA 350 L + D KRLLA S+ MG V + LG + LG L H++NH+ Sbjct: 299 TLRALGEHDCKRLLAQHSIGQMGYVLLGLGLGLTFLGSNPLFAALGFLGCLYHLINHACF 358 Query: 351 KTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 K+LLF +G++L + GTRDL+ + G+ +MP TA GAL++AG PPFN F+S+++ Sbjct: 359 KSLLFFNTGSILYRAGTRDLDSLGGLSAVMPLTAGCALVGALSIAGTPPFNGFVSKWLLY 418 Query: 411 TAGLARN-----HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDL--GWLTTS 463 + + + ++L V+ + + T+ LA V+ + P+ + Sbjct: 419 QSAIFGDVSTPVYILAAVVAIFIGTVTLASFVKYMGTAYLGTLPKRFVGSGFGCPRSMEA 478 Query: 464 PMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGT 498 V L V+ L MG P PV+ L G +G Sbjct: 479 VEVFLAVVCLVMGV-FPGPVVATLLGVLDPAFAGA 512 >UniRef50_B1ZRS2 Proton-translocating NADH-quinone oxidoreductase, chain L n=3 Tax=Verrucomicrobia RepID=B1ZRS2_OPITP Length = 622 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 126/483 (26%), Positives = 212/483 (43%), Gaps = 53/483 (10%) Query: 19 LLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI----FAAGLWLHIDG 74 ++ R+ A + + T LILA + A A + F+ L D Sbjct: 20 VIALFLRRAGEIAAVVSVLAAAGIATGALILAFGNHRFEATAEWLRLGDFSFPLGFKFDD 79 Query: 75 LGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNN 134 L L L ++GV+GF ++S GYMR + A Y+G +F+F+M+ + ++N Sbjct: 80 LAALMLFVVGVVGFFIHVFSFGYMREDTAK--------ARYFGGLSIFMFSMIGITVADN 131 Query: 135 LIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKY-IIICTVGVAFGLFGTVLVYANAASV 193 L +M+ E SS L+G + +R S AA K I+ VG L G + Y +V Sbjct: 132 LFMMFVFWELVGFSSWLLIGHWHERPSASAAAKKAFIVNRVGDFGFLLGIAMCYWVHGTV 191 Query: 194 MPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPV 253 + + L + L G K+ P+ WLPDA E P+PV Sbjct: 192 TLSELDGV-------------QPVGALLPLLLFCGAVGKSAQMPLQVWLPDAM-EGPTPV 237 Query: 254 SALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKR 312 SAL+ A ++ + +L R +++ +++ G + AA +VQ DIK+ Sbjct: 238 SALIHAATMVAAGIYMLCRINVLMVPE-----ALTVIMWVGTATALYAALCAIVQSDIKK 292 Query: 313 LLAYSSVENMGLVAVELGIGG----------------PLGIFAALLHILNHSLAKTLLFC 356 +LAYS++ +G + G+G G+ AA+ H++ H+ K LLF Sbjct: 293 VLAYSTLSQLGYMVAAFGLGSLAERHEMGGAVHEIVIAAGVGAAMFHLVTHAFFKALLFL 352 Query: 357 GSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLA 415 GSG+V+ + +D+ + G++K MP T F G LA+ GMP F S+ + Sbjct: 353 GSGSVIHGCHHEQDIFKMGGLVKRMPVTFATFTIGVLAIIGMPGLAGFFSKDAILLLAYQ 412 Query: 416 RNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP--PQAVNRGDLGWLTTSPMVILLVMML 473 +N + +VL + L +VR+ P A + + G + T P+++L + + Sbjct: 413 KNAAVFVVLAFTAI-LTACYMVRVWKITFFGAPRSEHAEHAHESGSVLTMPLIVLAALAI 471 Query: 474 AMG 476 G Sbjct: 472 LGG 474 >UniRef50_Q34313 NADH-ubiquinone oxidoreductase chain 5 n=6 Tax=Eukaryota RepID=NU5M_DICDI Length = 670 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 110/494 (22%), Positives = 210/494 (42%), Gaps = 38/494 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 M+ + L+ PL+ S++ + + + + +T + L + ++ F Sbjct: 1 MYIVNLILPLIGSIITGIFGHKLGNRISIKIAVGCMMLTAISSLYIGYEILLCNSVVHFK 60 Query: 66 AGLWLHI-----------DGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 G W+ + D L + + ++ I + +YS+ YM+ + Sbjct: 61 LGTWMQVGSLNVEYGLLYDSLTSIMIIVITCISSMVHLYSMDYMKEDPHK--------TR 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICT 173 ++ + LF F M+L+VT++N + ++ E + S L+ + R + ++A K +I+ Sbjct: 113 FFSYLSLFTFFMMLLVTADNFVQLFFGWEGVGIMSYLLINFWYTRLQANKSALKAVILNR 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQ--AEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 G FG +LV+ SV +A F +E + + L F++IG Sbjct: 173 FGDFGLFFGILLVFLVFKSVDFSVIFTIAPFITEYTINLLGYEVNAITLIGSFIVIGVVG 232 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ +H WLPDA E P+PVSALL A ++ + +++R ++ S +L Sbjct: 233 KSAQLGLHMWLPDAM-EGPTPVSALLHAATMVTAGVFLVLRTSPLLSY---SITILNILT 288 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 I G L+ A +VQ DIKR++AYS+ +G + G+ A++ H+ H+ Sbjct: 289 IIGALTTLFATTIGIVQNDIKRVIAYSTCSQLGYMIFACGLLN---YNASIYHLTTHAFF 345 Query: 351 KTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 K LLF +G+V+ +D+ + G++ +MP T G LAL G P + + S+ + Sbjct: 346 KALLFLSAGSVIHGLNDEQDMRKMGGLVNLMPLTYQCMLIGTLALTGFPFLSGYYSKDII 405 Query: 410 ITAGLARNHL---LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVN----RGDLGWLTT 462 + A + ++ + R+ KP + Sbjct: 406 LETSYATYYWEGTFAAIIGYVAAFGTTFYSFRLLILTFFNKPRMQYKTIAGVHEASTNMV 465 Query: 463 SPMVILLVMMLAMG 476 P+VIL + + +G Sbjct: 466 IPLVILALCSIFIG 479 >UniRef50_C1ZFV1 NADH dehydrogenase subunit L n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZFV1_PLALI Length = 696 Score = 305 bits (781), Expect = 3e-81, Method: Composition-based stats. Identities = 112/437 (25%), Positives = 185/437 (42%), Gaps = 36/437 (8%) Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 + L D + L L ++ + L I++ YM + + ++G LF+ Sbjct: 122 LTVDIVLRADAMTALMLVMVNFVSLLVAIFASSYMHGDKGY--------PRFFGAMALFV 173 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVAFGLFG 182 F+M ++V + N I ++ EA L S L+G + + S AA K ++ +G + Sbjct: 174 FSMNMLVLAGNFIEVFIFWEAVGLCSYLLIGHWYHKPSAAAAARKAFVVNRIGDFGLMTA 233 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 L+Y SV + + L + + P L+ + LL+G K+ FP+H WL Sbjct: 234 IFLIYRTFGSVDFE---TVLDPARLAELAAAQPGLVTTIALLLLLGAIGKSAQFPLHVWL 290 Query: 243 PDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 PDA E P+PVSAL+ A ++ + ++ R I S ++ G ++ VAA Sbjct: 291 PDAM-EGPTPVSALIHAATMVTAGVYLIARTTPIFVH---SPTAQLVVAGVGAITALVAA 346 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFA------ALLHILNHSLAKTLLF 355 L Q D+KR+LAYS+V +G + + LG A A+ H+L H+ K +LF Sbjct: 347 ITALCQYDLKRVLAYSTVSQLGYMFMALGAAAASPALAAHAETFAMFHLLTHAFFKAVLF 406 Query: 356 CGSGNVLLKYGTR-DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 +G+V+ G D+ G+ K +P T + F GALALAG P + F S+ + Sbjct: 407 LAAGSVMHAMGDVIDMRRFSGLRKALPITHITFLCGALALAGFPLLSGFWSKDEILAVVW 466 Query: 415 ARNH--------LLIIVLLLLLLTLVLAGLVRMAARVLMA----KPPQAVNRGDLGWLTT 462 LI+ + LL L R + D Sbjct: 467 EATQTGDYKTYFYLILGVGLLTSLLTAFYTFRAYYLTFHGPERFPEEAGHHPHDASPAMA 526 Query: 463 SPMVILLVMMLAMGTHI 479 P+ IL + + G + Sbjct: 527 IPLYILAALAVVAGLIL 543 >UniRef50_C2FWK2 Possible NADH dehydrogenase (Quinone) n=2 Tax=Sphingobacterium spiritivorum RepID=C2FWK2_9SPHI Length = 679 Score = 305 bits (781), Expect = 3e-81, Method: Composition-based stats. Identities = 121/505 (23%), Positives = 211/505 (41%), Gaps = 54/505 (10%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATR-TVTVLHSLGITLLLILALWVVQTAADAGEIFAA 66 L L P L KR S + + S LL + +W +T + F Sbjct: 14 LLTLALPFAAFLYQALLGKRAQSGIIPAIAIALSALFGLLTFVEIWNYRTVHIQTDWFTI 73 Query: 67 G-----LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 G + + ++ L L L I+ VI +YS YM + + Y+ + L Sbjct: 74 GNKTFTVGILLNNLTALMLLIVPVIALPVHLYSRSYMHGDKG--------IHRYWMYLSL 125 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFGL 180 F F ML +V NNL++M+ E +S L+G + + + +A K II +G L Sbjct: 126 FCFAMLGLVMMNNLLLMYIFWELVGFASYLLIGFWFTKESAAQANKKAFIINRIGDLGFL 185 Query: 181 FGTVLVYANAASV----------MPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 G +VY+ ++ + + + ++ + + A + IG Sbjct: 186 TGIAIVYSQFGTLNLVELFGSDGLAYQAILSDGQWISPMNNTMPAGWLTAAGIAFFIGAM 245 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ FP+H WLPDA E P+ VS+L+ A + A + L+ + + ++ Sbjct: 246 AKSAQFPLHVWLPDAM-EGPTSVSSLIHAATMVAAGVFLMATLFPLFN----ETVLLVIA 300 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 + G L+ A AA+F L Q DIKR+LA+S++ +G + V +GIG AA+ H+ H Sbjct: 301 VIGTLTAASAAYFALAQYDIKRILAFSTISQLGYMMVGIGIG---AWDAAIFHLATHVFF 357 Query: 351 KTLLFCGSGNVLLKY-----------GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPP 399 K LLF +G V+ + +DL + G+ K MP T L +LAL+G P Sbjct: 358 KCLLFLCAGAVIHEMVHLKEKSQQDFDAQDLRNMGGLRKYMPKTFALMALSSLALSGFPL 417 Query: 400 FNIFLSEFMTITAGLARN------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA-- 451 + +LS+ + + + + +I V+L+++ L + R+ + + Sbjct: 418 TSGYLSKDSIVISAFEWSSTHGAVYHIIPVVLIVVSILTAFYIGRLIFKAFFGQLRVPSS 477 Query: 452 --VNRGDLGWLTTSPMVILLVMMLA 474 + + PM L + Sbjct: 478 LTAPMHEAPKMMLIPMFFLALWCFF 502 >UniRef50_B8FUM3 NADH dehydrogenase (Quinone) n=3 Tax=Desulfitobacterium RepID=B8FUM3_DESHD Length = 637 Score = 305 bits (781), Expect = 3e-81, Method: Composition-based stats. Identities = 150/512 (29%), Positives = 233/512 (45%), Gaps = 48/512 (9%) Query: 30 SATRTVTVLHSLGITLLLILAL-WVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGF 88 R T+ SL I +L IL L W +G+ G DGL FL +L + Sbjct: 6 RGIRVGTMGLSLMIAILGILFLGWNFHMDNFSGQWHGEG--FSCDGLTAFFLLVLLLGQG 63 Query: 89 LTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLS 148 + +Y +GYM+ +L + + FL +M V+ NN E +L Sbjct: 64 IASLYGLGYMKDYEGKR-----SLLSFSLSWAAFLGSMAGVLIVNNGFYFLFLWELMSLF 118 Query: 149 SAFLVGIYGQRSS-LEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVL 207 S LV + SS AA+ Y ++ VG F + + +Y+ S + + + Sbjct: 119 SFLLVIYEHEESSNRRAAFIYFVMTHVGTVFLIAAVLYLYSKTGSFL--------YGDWA 170 Query: 208 KQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALL 267 + L P F+ LIGFGTK GL P H WLP AH APSPVSAL+S V++ AL Sbjct: 171 AITPTLSPGEKNGLFLCFLIGFGTKAGLVPFHIWLPYAHPVAPSPVSALMSGVMVKIALY 230 Query: 268 VLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAV 327 +++R ++ + A + L+L G+LS + + V++D+KRLLAYS+VENMG++ + Sbjct: 231 MMMR-WVWLTLAPMELWWGGLMLALGVLSAFIGILYACVEQDVKRLLAYSTVENMGILTM 289 Query: 328 ELGIGG-----------PLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGM 376 LG L + A H ++H L K+ LF +GN++ T+ L+ + G+ Sbjct: 290 ALGTAMIARTLGYSDLVVLALAAFFWHGIHHLLFKSGLFMAAGNIIQATHTKRLDQMGGL 349 Query: 377 LKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA-----------GLARNHLLIIVLL 425 LK MP T + GA+ L+ +PP F E++ A L + L Sbjct: 350 LKKMPRTGLWAMVGAVGLSALPPLGGFWGEWLLFHALWKTSVQVEGGLFKLALPLSLAAL 409 Query: 426 LLLLTLVLAGLVRMAARVLMAKPPQ--AVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPV 483 + L LA +V+ A + + A N +L W T M + +++ L + T PQ + Sbjct: 410 AFISALALATMVKWFAGAFLGQARSANAANAQELPWPQTVSMAMAMMLTL-LATLYPQGL 468 Query: 484 IRILAGASTIVLSGTHDLPAQRS----TWHDF 511 +++ VL T D P S W DF Sbjct: 469 WKLI-SVPIHVLKDTSDSPLTDSLALPLWADF 499 >UniRef50_C1A8Y3 NADH-quinone oxidoreductase chain L n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y3_GEMAT Length = 674 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 116/509 (22%), Positives = 212/509 (41%), Gaps = 71/509 (13%) Query: 24 CRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLW-----------LHI 72 R +S ++ + + + L + + + I + G W + Sbjct: 38 ARHPLVSIVGPGVIIAAFAVAMALFMRM---RVGMAGPAIVSLGQWMPVGNLVIDWNFQL 94 Query: 73 DGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTS 132 D L L + ++ +G L ++SIGYM+ + + Y+ + +LF+ ML++V Sbjct: 95 DQLSMLMVLVITGVGSLIHLFSIGYMQDDPGY--------ARYFAYLNLFVAFMLVLVLG 146 Query: 133 NNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAA 191 + VM+ E L+S L+G + +++ +A K ++ VG L L++ Sbjct: 147 GSYPVMFVGWEGVGLASYLLIGFWFSDKANADAGKKAFVVNRVGDFGFLVAMFLIWVTTQ 206 Query: 192 SVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPS 251 + ++ + ++L +FL +G K+ P++ WLPDA + P+ Sbjct: 207 HLDFVGAHSVL-------GGMGGTPVVLAIALFLFVGCAGKSAQLPLYIWLPDAMA-GPT 258 Query: 252 PVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDI 310 PVSAL+ A ++ + ++ R I G+ + ++ G L+ AA L Q DI Sbjct: 259 PVSALIHAATMVTAGVYLVARAAPIF---AGAPEASLVITAIGALTALFAATIALRQWDI 315 Query: 311 KRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGT--- 367 K++LAYS+V +G + V +G G A + H++ H+ K LLF G+G+V+ Sbjct: 316 KKVLAYSTVSQLGYMFVAVGSG---AYTAGVFHLVTHAFFKALLFLGAGSVIHAMHHAYH 372 Query: 368 --------RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH- 418 +DL + G+ + MP TA LA+AG+PP F S+ + AR H Sbjct: 373 HTHRHDDPQDLRNMGGLARFMPATAGAMTLATLAIAGVPPLAGFFSKDEILAGVFARAHD 432 Query: 419 -----------------LLIIVLLLLLLTLVLAGLVRMAARVLMAK----PPQAVNRGDL 457 + +L L + RM + + + Sbjct: 433 SPLANASLLGIPGSTVLYAAYGIGILTALLTAIYMTRMLLLAFYGENRTGEAERSALHEA 492 Query: 458 GWLTTSPMVILLVMMLAMGTHIPQPVIRI 486 + T+P++IL V+ LA G +I I Sbjct: 493 PLIMTAPVLILGVLTLAGGWLNLPALIPI 521 >UniRef50_Q2FZV1 Na(+)/H(+) antiporter subunit A1 n=72 Tax=Bacillales RepID=MNHA1_STAA8 Length = 801 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 132/544 (24%), Positives = 235/544 (43%), Gaps = 55/544 (10%) Query: 6 MFALLLLTPLLFSLLC-----FACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 + + ++ PL+F+L+ F R V ++ + + L+ + Sbjct: 3 LLHIAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTL 62 Query: 61 GEIFAAGLWLHIDGLGGL--FLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 + G+ + G F ++ IG L +YSIGY+ L ++Y + Sbjct: 63 NWMPHFGMNFDLYLDGLGLLFSLLISGIGSLVVLYSIGYLSKSEQ--------LGNFYCY 114 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVA 177 LF+ ML VV S+N+I+++ E T+ SS L+ + +R +S+ A K +II G Sbjct: 115 LLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQKSLIITVFGGL 174 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L G +L+ S Q + S + + + A + ++IG TK+ FP Sbjct: 175 SLLGGIILLAIPTQSFSIQY-------MIQHASEIQNSPFFIFAMILIMIGAFTKSAQFP 227 Query: 238 MHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 + WLPDA EAP+PVSA L SA ++ L ++ R I + G + L+ G+++ Sbjct: 228 FYIWLPDAM-EAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWVWTVTLV---GLIT 283 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGG-------------PLGIFAALLH 343 + A+ Q+D+K +LA+S+V +G++ LGIG AA+ H Sbjct: 284 LFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAISYHYQGDDSKIYAAAFTAAIFH 343 Query: 344 ILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 ++NH+ K LF +G V GTRD+ + G+L IMP + + AL++AG+PPFN F Sbjct: 344 LINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITVITALSMAGVPPFNGF 403 Query: 404 LSEFMTITAGLARNH----------LLIIVLLLLLLTLVLAGLVRMAARVLMA--KPPQA 451 LS+ + + L ++ ++ ++ + KP Q Sbjct: 404 LSKESFLETTFTASQANLFSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQL 463 Query: 452 VNR-GDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHD 510 + ++ L IL +++ G I+ A++ + D +H Sbjct: 464 PKKAHEVSILMLLSPAILATLVIVFGLFPGILTNSIIEPATSSINHTVIDDVEF-HMFHG 522 Query: 511 FLPS 514 P+ Sbjct: 523 LTPA 526 >UniRef50_C0VMK3 NADH dehydrogenase I subunit L n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VMK3_9GAMM Length = 631 Score = 304 bits (780), Expect = 4e-81, Method: Composition-based stats. Identities = 131/508 (25%), Positives = 224/508 (44%), Gaps = 44/508 (8%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI--- 63 L +L PL+ +L A R + + + S+G++ + L + T + Sbjct: 4 LYLTILFPLIGFILLAAGRNKLSENVAAIIGVGSVGLSAVFALIAGLAFTNSGDTVFVQH 63 Query: 64 ---------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 FA G+ L +DGL + + ++ +GFL I++ YMR E + Sbjct: 64 LWTWFNVGGFAPGISLQLDGLSLIMMGMVTGVGFLIHIFASWYMRGEEDYA--------R 115 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICT 173 ++ +F+LF+ +MLL+V +NL +++ E L S L+G Y + AA K + Sbjct: 116 FFSYFNLFVASMLLLVLGDNLALLFLGWEGVGLCSYLLIGFYYSNPANGWAAIKAFTVTR 175 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 VG F L L+Y ++ Q + + + + SS L + + L +G K+ Sbjct: 176 VGDVFLLIALFLLYQQFGTLNTQYIVENAATVMTQSSS-----LSIWTALMLFLGAAGKS 230 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 P+ WL DA + P+PVSAL+ A ++ + + R + ++ A + + I Sbjct: 231 AQIPLQTWLADAMA-GPTPVSALIHAATMVTAGVYLCCRMFSVMEMA---PEVMQFISIT 286 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G +++ VA F LVQ DIKR+LAYS++ +G + + +G A L H+L H+ K Sbjct: 287 GAVTLLVAGFAALVQTDIKRILAYSTMSQLGYMFMAVG---AEAYQAGLFHMLTHAFFKA 343 Query: 353 LLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFN-IFLSEFMTI 410 LLF SG V+L + +++ + G+ K F F G ALA +P F S+ + Sbjct: 344 LLFLSSGAVILAYHHEQNIFKMGGLFKHNKFLFACFAIGGGALAAIPFLTVGFFSKDAIL 403 Query: 411 TAGLARNHL-------LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTS 463 A H + + + L R+ V + A + G + Sbjct: 404 WQVWAHGHTTGIETFGTLFWVGVAGAFLTSIYTFRLIWIVFFGEEKTAYHPIK-GATYWA 462 Query: 464 PMVILLVMMLAMGTHIPQPVIRILAGAS 491 P+ IL V+ +G + PVI IL A Sbjct: 463 PLAILAVLSTGVGALLQAPVIGILNQAG 490 >UniRef50_B2SEW0 NADH dehydrogenase I, L subunit n=25 Tax=Proteobacteria RepID=B2SEW0_FRATM Length = 669 Score = 304 bits (780), Expect = 4e-81, Method: Composition-based stats. Identities = 119/501 (23%), Positives = 217/501 (43%), Gaps = 40/501 (7%) Query: 4 SVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWV---------- 53 +V+ A+++L PLL +L+ K +A + G++ +L + L Sbjct: 9 AVLIAVIVLAPLLGALIAGFGGKSVKNAGVNFFTISLCGLSFVLSVILAYGVFSGAEVYS 68 Query: 54 --VQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 A +FA + ++ + + I+ + L IYSIGYM+ E + Sbjct: 69 VSFYQWAPISNMFAFDVGFTVNKITVYMMLIVTFVSTLVHIYSIGYMKGEEGY------- 121 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYII 170 ++ + F F ML +V NN ++++ E L S L+G Y R A+ + I Sbjct: 122 -ARFFAYISGFTFAMLCLVMGNNFLLLFFGWEGVGLFSYLLIGFYFNRDKANVASLRAFI 180 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQS---SLLDPTLMLLAFVFLLI 227 + +G L G V SV A Q+ + + + L L I Sbjct: 181 VNRIGDLGFLLGIGAVILYTKSVDYTTVFAALPDIDNTQTIHFLGISFSPVTLMCSLLFI 240 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPN 286 G K+ FP+H+WL + E P+P+SAL+ A ++ + ++ R + + S Sbjct: 241 GAMGKSAQFPLHSWLEGSM-EGPTPISALIHAATMVTAGVFMVARLSPMF---VLSPAAL 296 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 +LI G ++ +VQ DIKR++AY ++ +G + V G G + H++ Sbjct: 297 SFVLIIGAITCLFMGLIAIVQTDIKRVIAYCTLSQLGYMMVAQGAG---AFSIGMFHLMT 353 Query: 347 HSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 H++ K LLF +G+V++ + +D+ + G+ K MP T + GA ALA +PPF+ F S Sbjct: 354 HAMFKALLFLAAGSVIVAMHHEQDIRRMGGLRKYMPVTYLCMLIGAWALAALPPFSGFFS 413 Query: 406 EFMTITAGLA---RNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP----PQAVNRGDLG 458 + + I A A H ++L + + RM V K + + + Sbjct: 414 KDLIIEAAQATTVYGHEFAYYMVLACAFVTSFYIFRMFFLVFHGKERMSDEERSHLKESP 473 Query: 459 WLTTSPMVILLVMMLAMGTHI 479 + P+++L + + +G + Sbjct: 474 FSILIPLILLAIPSVFVGEYF 494 >UniRef50_Q2WAW3 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter n=47 Tax=Bacteria RepID=Q2WAW3_MAGSA Length = 496 Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats. Identities = 174/489 (35%), Positives = 271/489 (55%), Gaps = 15/489 (3%) Query: 10 LLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLW 69 +L PL + R R++A V + G+T L L V+ Sbjct: 18 ILGVPLGSAGFLAVLRNWRVAAWVNV---AASGVTFASSLVLIHVRP--------EPTRL 66 Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L ID + + +G T ++S Y+ E LS + L Y+ + F FTMLL Sbjct: 67 LFIDDFNVYLVVLTAFVGLTTSVFSAAYIARESEAQRLSDLHLRFYHSMYQAFSFTMLLA 126 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 + +NN VMW A+EA TL++ +V +Y R ++EAAWKY I+C+VG+ LFGT LVY Sbjct: 127 LCANNTGVMWVAVEAATLTTVLMVSLYRTREAIEAAWKYFILCSVGIGLALFGTTLVYLA 186 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 A VM A+ W+ ++K++ P L+ LAFVF+L+G+GTK GL P+HAWLPDAH+E Sbjct: 187 AQPVMGDGADAMAWTLMIKRAHDFQPDLLNLAFVFVLVGYGTKVGLAPLHAWLPDAHAEG 246 Query: 250 PSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRD 309 P+P+SA+LS +LLN AL L+R+ ++I + P LL++ G+ S+ ++AF + + D Sbjct: 247 PTPISAVLSGLLLNVALYALLRFKMVIAANGNTLTPGPLLVVMGLSSLFLSAFMLYRRGD 306 Query: 310 IKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRD 369 IKRL AYSS+E+MG++ G+GG + FA LLH+ HSL K+ +F G + GT+ Sbjct: 307 IKRLFAYSSIEHMGVITFAFGMGGAVANFAGLLHMTMHSLTKSAIFFAVGIISQNLGTKR 366 Query: 370 LNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLL 429 + + G+ P F LA+AG+PP +F+SEF+ + + AR LL I L + LL Sbjct: 367 IAAIRGLTSSHPVLGWGFVLAVLAIAGLPPMGVFMSEFLVLGSTFARQPLLAIPLAVGLL 426 Query: 430 TLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTS----PMVILLVMMLAMGTHIPQPVIR 485 A + R+ + PP A G G L+T+ P+ + ++++L G ++P+ ++ Sbjct: 427 LAFGALVARLQSMAFGEPPPHAHAHGHAGPLSTALALTPLWVHMLLVLVAGLYLPRELVA 486 Query: 486 ILAGASTIV 494 + I+ Sbjct: 487 WFQNVARIL 495 >UniRef50_C6XJX2 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=cellular organisms RepID=C6XJX2_HIRBI Length = 761 Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats. Identities = 112/523 (21%), Positives = 200/523 (38%), Gaps = 51/523 (9%) Query: 19 LLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGL 78 ++ A L + + T +++A W+ A A + ID + + Sbjct: 79 VVMAALCAASLFFAQFFAASSGVADTQSVLIARWIDVGAMQANW------AIRIDTMSIV 132 Query: 79 FLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVM 138 + ++ + L IYS GYM H++ ++ + LF F ML+++T++N + + Sbjct: 133 MMFVVTSVSSLVHIYSWGYMSHDMGR--------ARFFTYLSLFTFMMLMLITADNFLQL 184 Query: 139 WAAIEATTLSSAFLVGIYGQRSSLEAA-WKYIIICTVGVAFGLFGTVLVYANAASVMPQA 197 + E L+S L+G + + S AA K + VG G + V+ +V Sbjct: 185 FFGWEGVGLASYLLIGFWYHKPSANAASIKAFVTNRVGDVGFALGIMTVFLVFGTVEFAP 244 Query: 198 EM----------------AIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 A +V+ + M + V L IG K+ +H W Sbjct: 245 VFEAIKTNATVTPFAFGEAGHAQDVVISVLGVTAPAMEIIGVLLFIGAMGKSAQLLLHVW 304 Query: 242 LPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 LPDA E P+PVSAL+ A + A +VL+ I + + + + ++ G + AA Sbjct: 305 LPDAM-EGPTPVSALIHAATMVTAGVVLVVLCSPIYEF--TTYASAMITFIGAATAIFAA 361 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 L+Q DIKR++AYS+ +G + G+G AA+ H+ H+ K +LF +G V Sbjct: 362 TVALMQNDIKRVIAYSTCSQLGYMFFAAGVG---AYDAAMFHLFTHAFFKAMLFLTAGAV 418 Query: 362 LLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALAL--AGMP----PFNIFLSEFMTITAGL 414 + +D+ + G+ MP ++ G LA+ G+P F F S+ + Sbjct: 419 IHGLADEQDMRKMGGLRAKMPIAWLMMLIGTLAITGVGIPGTHIGFAGFFSKDAILEEAF 478 Query: 415 ARNHL---LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA----VNRGDLGWLTTSPMVI 467 + ++ L R+ K + D + P+ + Sbjct: 479 LSGGMYAQFAFWAGIVAALLTSFYSWRLMIMTFHGKTRANKHDFDHAHDAPLVMGMPLYL 538 Query: 468 LLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHD 510 L + G I L + + T HD Sbjct: 539 LAGGAVLAGVVFYSAFIGDLTKVNKDFWGSSIYKAEIAETSHD 581 >UniRef50_B2V982 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Aquificales RepID=B2V982_SULSY Length = 648 Score = 304 bits (779), Expect = 5e-81, Method: Composition-based stats. Identities = 114/492 (23%), Positives = 220/492 (44%), Gaps = 45/492 (9%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAA 66 ++ +PL+ ++ + L + ++ +G+ + I ++ A++G+ + Sbjct: 4 LWIIPFSPLIAFVIIGLFGYKLLKEPLS-GIVAVIGVAISAIASVKGFIDVAESGKYYDL 62 Query: 67 GL--WLHI-----------DGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 L WL I D L L ++ + I++ GYM+ + ++ Sbjct: 63 KLFNWLTIGDYSISVSIFWDPLSALMTCVVTCVSTFIFIFATGYMKGDESY--------P 114 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAWKYIIIC 172 ++ + LF+F ML++ S+NL+ ++ E L+S L+G + ++S+ AA + ++ Sbjct: 115 RFFAYLSLFVFMMLMLTLSDNLVQLFFGWEGVGLASYLLIGFWHYKKSAANAAMEAFVVN 174 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTK 232 VG L G +L + ++ + ++ + +D ++ + L G K Sbjct: 175 RVGDWLFLLGILLAFTTFGTLD--------YLQIFNKLHGMDYIIVTFIALLLFGGAVGK 226 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLI 291 + P+H WLP+A E P+PVSAL+ A ++ + ++ R + S+ +L Sbjct: 227 SAQIPLHIWLPNAM-EGPTPVSALIHAATMVAAGVYMVARLMPVF---ASSEIALDTVLF 282 Query: 292 FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAK 351 G +S +AA LVQ DIKR++AYS++ +G + G+G + H+ +H++ K Sbjct: 283 IGTMSAFLAATMGLVQNDIKRIIAYSTLSQLGYMFAAEGLGL---FSEGMFHLTSHAVFK 339 Query: 352 TLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 LLF GSG+VL+ + D+ + + ++MP T F G+LALAG+PPF F S+ I Sbjct: 340 ALLFLGSGSVLIALHHLLDVQKMGQIGRLMPITMGTFLIGSLALAGIPPFVGFFSKDPII 399 Query: 411 TAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA----VNRGDLGWLTTSPMV 466 N L L L + R+ + + T P++ Sbjct: 400 EGAYEIN-TFAFTFLWLGAFLTAFYIFRLFFLTFFDGDRLDHHIREHVHESPPNMTIPLI 458 Query: 467 ILLVMMLAMGTH 478 +L + +G Sbjct: 459 VLATATVILGFF 470 >UniRef50_Q0F380 NADH dehydrogenase subunit N n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F380_9PROT Length = 633 Score = 304 bits (779), Expect = 5e-81, Method: Composition-based stats. Identities = 134/480 (27%), Positives = 215/480 (44%), Gaps = 44/480 (9%) Query: 68 LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 + +DGL FL ++G + IYS GY++ E G L+ F LF+ ML Sbjct: 35 MHFRVDGLSAFFLLVIGTLLLPVAIYSQGYLKGEKRLGALA--------VFLPLFVLGML 86 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLV 186 VV +++ E ++SS FLV +R + +A + Y+++ + L G ++ Sbjct: 87 GVVIADDAFTFMLFWEMMSVSSYFLVTFEHERLENRKAGFIYLLMAHLAGLLILGGFAVL 146 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 YA + S + +++ L P AF+ + GFGTK G+ PMH WLPDAH Sbjct: 147 YAASGSFEFS----------VMRAAHLFPFWATAAFLLVAFGFGTKAGVVPMHGWLPDAH 196 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRY-YIIICQAIGSDFPNRLLLIFGMLSVAVAAFFIL 305 APS VSAL+S ++L A+ +R + +I + L+L G S F L Sbjct: 197 PVAPSNVSALMSGIMLKVAVFGFLRVVWDLIGPGDFQWWWGALVLTAGSASAVSGVLFAL 256 Query: 306 VQRDIKRLLAYSSVENMGLVA-----------VELGIGGPLGIFAALLHILNHSLAKTLL 354 Q D+KRLLAY S+EN+G++ + LG+ A L H +NH+L K LL Sbjct: 257 QQHDLKRLLAYHSIENIGIILIGLGLGMLLAHFGHPLLAALGLIAGLYHTINHALFKGLL 316 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 F G+G VL GTRD+ + G++ MP TA+ F ++++ +PPFN F+SE++T L Sbjct: 317 FMGAGAVLHVTGTRDMETMGGLIHRMPATALFFLVACVSISALPPFNGFVSEWLTFQTAL 376 Query: 415 ARNHLLIIVLLLLL----------LTLVLAGLVRMAARVLMA--KPPQAVNRGDLGWLTT 462 L +L ++ L A V++ V + + ++ Sbjct: 377 MAPQLGGALLTAIVPFSAAMLALAGALAAACFVKVFGVVFLGHARSEHVAGAHEVDGWMK 436 Query: 463 SPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEK 522 M I ++ L + +P I ++ +L + W P S Sbjct: 437 LGMAIPALLCLLL-GLLPVMFIPLMDAIPASLLHVSLGAHLYEHGWLWLTPVDATHASYS 495 >UniRef50_B0BZT1 Proton-translocating NAD(P)H-quinone oxidoreductase, chain M n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0BZT1_ACAM1 Length = 490 Score = 303 bits (778), Expect = 7e-81, Method: Composition-based stats. Identities = 111/486 (22%), Positives = 205/486 (42%), Gaps = 31/486 (6%) Query: 4 SVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI 63 S + +L++ +PL+ +++ K + S + +++ + + ++ L A ++ Sbjct: 3 SHLLSLIIFSPLVGAVIILLLPKAQESLYKWISLANMVVVSALTFAAFLQFDPNQTGFQL 62 Query: 64 FAAGLW---------LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 LW L DG+ + + +I L I S + E Sbjct: 63 VEKTLWIPQLNVYYLLGTDGISFPMVVLTALISTLASIGSFSIKKREKE----------- 111 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTV 174 YY + + M+ + ++I+ + E + FL+GI+G AA K+ + Sbjct: 112 YYCLYLFLVTGMMGTFLALDMILFYVFWEVVLVPMYFLIGIWGGPRKEYAAMKFFLYTFA 171 Query: 175 GVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 G L G + +Y N+A ++ + + + F+ L +GF K Sbjct: 172 GSLLMLVGILGMYFNSA--------PHTFNIMELVAQDFSFGFQKIVFLALFVGFAVKVP 223 Query: 235 LFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 FP H WLPDAH EAP+P+S +L+ VLL R+ I +++ L + Sbjct: 224 TFPFHTWLPDAHVEAPTPISVILAGVLLKMGTYGFFRFSFPILPE-AANWFRPYLAVLAA 282 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLL 354 + + F L Q D K+++AYSS+ +MG V + L G A+L + +H + L Sbjct: 283 IGIVYGGFIALAQTDFKKMVAYSSISHMGFVLLGLAAFSTNGFNGAMLQMFSHGVITGAL 342 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 F G + + TRD+N G+ +P + +LA G+P + F+SEF+ + Sbjct: 343 FLLVGVIYDRAHTRDMNAFGGLNAQLPVYSGFLVFFSLASLGLPGLSGFVSEFLVLLGSY 402 Query: 415 ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK-PPQAVNRGDLGWLTTSPMVILLVMML 473 + L + + L L+ M RVL+ P+ + D+ +V LL++ L Sbjct: 403 EYSKLY-TAFACMGILLAACYLLFMVRRVLLGPANPKWESLPDINMREVVTVVPLLIITL 461 Query: 474 AMGTHI 479 +G + Sbjct: 462 GIGIYP 467 >UniRef50_C7NIQ7 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit n=2 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NIQ7_KYTSD Length = 1003 Score = 303 bits (778), Expect = 7e-81, Method: Composition-based stats. Identities = 117/459 (25%), Positives = 187/459 (40%), Gaps = 31/459 (6%) Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 L +D L + ++ IG L IY +GY + L + G F Sbjct: 81 LGMNLDFRLDSLSWVLAMVVVFIGTLVLIYCVGYFEDDE-------PGLGLFAGSLTAFA 133 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYIIICTVGVAFGLFG 182 ML +VT++N++V++ E T++ S L+G R S AA + +II G L G Sbjct: 134 GAMLGLVTTDNMLVLYVFWEITSVLSFLLIGHRITSRHSRSAAMEALIITASGGLAMLVG 193 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 V + S A MA L+ + V LL+G TK+ + P H WL Sbjct: 194 IVGLGQATGSYSISALMA---------HPPEAGPLVTASVVLLLVGAITKSAMVPFHFWL 244 Query: 243 PDAHSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 P A + AP+PVSA L A ++ + ++ R+ D +L+ G ++ + A Sbjct: 245 PGAMA-APTPVSAYLHAAAMVKAGIYLIARFAPAFADL---DVWKWTVLLLGGPTMLLGA 300 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 + L Q DIK +LAY +V +G + + +G G A L ++ H+L K LF G + Sbjct: 301 WRSLRQVDIKLVLAYGTVSQLGFLVLVVGHGTQDAALAGLTLLVAHALFKGSLFLVVGAI 360 Query: 362 LLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLI 421 GTRDL + G+ + MP A ++AG+PP F+S+ T H Sbjct: 361 DHCTGTRDLRRLSGLARSMPVLFATACVSAASMAGVPPLLGFVSKEGAYTVFNPVEHGWF 420 Query: 422 ------IVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR-GDLGWLTTSPMVILLVMMLA 474 V +L+ + A R + + + D G+ +L V + Sbjct: 421 TVEGVTFVFILVGSMMTFAYSARFLWGAFRTQRTKPLTEVHDPGFFLQFSPALLAVCTIV 480 Query: 475 MGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLP 513 +G + L S + H P WH + P Sbjct: 481 LGLTSKTVLEPWLGNYSGWWAASEH--PLHLGLWHGWTP 517 >UniRef50_C1XJC0 NADH dehydrogenase subunit L n=2 Tax=Meiothermus RepID=C1XJC0_MEIRU Length = 610 Score = 303 bits (778), Expect = 8e-81, Method: Composition-based stats. Identities = 104/418 (24%), Positives = 200/418 (47%), Gaps = 25/418 (5%) Query: 62 EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 + L++D L G+ L ++ +GFL +++IGYM + + ++ +F+L Sbjct: 64 WLPGIPFSLNLDNLSGVMLMVVTGVGFLIHVWAIGYMHGDPGY--------SRFFSYFNL 115 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYIIICTVGVAFGL 180 F+ ML+++ ++L V++ E L+S L+G + +R ++++A K I+ +G L Sbjct: 116 FIAAMLVLILGDSLPVVFIGWEGVGLASYLLIGFWYHERINVDSARKAFIVNRIGDLGFL 175 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 L+++ ++ +I ++ T + LA FLL+G K+ P+ Sbjct: 176 LAMGLLWSMFGTL------SISELAEKVEAGGYSFTTLTLAGFFLLVGAMGKSAQVPLMV 229 Query: 241 WLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLPDA + P+PVSAL+ A ++ + +L+R+ ++ + + L++ G+L+ Sbjct: 230 WLPDAMA-GPTPVSALIHAATMVTAGVYLLVRHAFMLHDDA---YLSGLIVFIGLLTAFY 285 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 A L Q DIKR++AY+++ +G + V +G+G + A+ HI+ H+ K L+F SG Sbjct: 286 GALCSLGQWDIKRIVAYTTLSQLGFMFVAVGVG---AYWVAIFHIVTHAFFKALMFMTSG 342 Query: 360 NVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH 418 +V+ G +D+ + GM K +P T + A G+ P F S+ + Sbjct: 343 SVIHALGGEQDVRKMGGMRKYLPATHLHGLIATFASGGLVPLAGFWSKDAILAYSFEYGP 402 Query: 419 LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMG 476 L L+LL L +R V + + + + P IL+ + +G Sbjct: 403 WLWF-LMLLASVLAALYSIRWYVLVFWGEYRGKEHPHESPAVMLWPNHILMGGAIGVG 459 >UniRef50_C9RJK6 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJK6_FIBSS Length = 647 Score = 303 bits (778), Expect = 8e-81, Method: Composition-based stats. Identities = 119/499 (23%), Positives = 213/499 (42%), Gaps = 42/499 (8%) Query: 5 VMFALLLLTPLLFSLLCFACR-----KRRLSATRTVTVLHSLGITLLLILALWVVQTAAD 59 + L+ L PLL ++ A ++ A V L L L + + Sbjct: 2 ISLGLIPLFPLLGCIILGAIAIISSGSKKGPAEGFVGTLAVLFPALSFAGVALLSLNMPE 61 Query: 60 AG-----------EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 G +F + DGL + L + IG L +YSIGYM + Sbjct: 62 GGVRETLCNWIDIPMFRVDIGFLFDGLSRIMLLFVTGIGSLIALYSIGYMHGDRG----- 116 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWK 167 Y+ + +LFLF+M+++V S+NL++ + E L S L+G + + + AA K Sbjct: 117 ---FARYFAYINLFLFSMIVLVLSDNLLLTFLGWEGVGLCSYLLIGFWNKDIKNCHAANK 173 Query: 168 YIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLD--PTLMLLAFVFL 225 I+ VG L G + + S + ++ + ++ + +D ++ +A + Sbjct: 174 AFIVNRVGDIGFLLGMLCLVTIGGSAILNYDVLTNFISMVISGNHVDLVIPVLSIAGILF 233 Query: 226 LIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDF 284 IG K+ P+ WLPDA + P+PVSAL+ A ++ + +L R + Sbjct: 234 FIGCTGKSAQIPLLTWLPDAMA-GPTPVSALIHAATMVTSGVYLLARLGSMFA---LLPV 289 Query: 285 PNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHI 344 ++++ GML+ AA L Q DIK++LAYS++ +G + + G+ A++ H+ Sbjct: 290 VLDIIVVVGMLTAFWAAVAGLFQNDIKKVLAYSTISQLGYMFMASGV---CAFDASIFHV 346 Query: 345 LNHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 H+ K LF G+G V+ G +D+ + G+LK P TA + LA+ G P F+ F Sbjct: 347 FTHAFFKAALFLGAGAVIHALSGEQDMRKMGGLLKKTPVTACVMIFAFLAIVGFPGFSGF 406 Query: 404 LSEFMTITAGLARNHL--LIIVLLLLLLTLVLAGLVRMAARVLMAK----PPQAVNRGDL 457 S+ + + + + V+ L+ + + R+ + + Sbjct: 407 WSKDLILEKIFMSGTMGQAVYVVGLITAVITAVYMGRLIILTFFGSYRGSKESEEHIHEA 466 Query: 458 GWLTTSPMVILLVMMLAMG 476 + PMVIL + G Sbjct: 467 PAVMLIPMVILAFGAVFAG 485 >UniRef50_Q2C5U2 NADH-plastoquinone oxidoreductase, chain 5 n=2 Tax=Photobacterium RepID=Q2C5U2_9GAMM Length = 626 Score = 303 bits (777), Expect = 9e-81, Method: Composition-based stats. Identities = 113/496 (22%), Positives = 202/496 (40%), Gaps = 42/496 (8%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA-- 60 + L+ PL + L K + + S+ ++ +L LW+ A Sbjct: 1 MNTWLWLIPAAPLFSAALIVLFGKHFPTRASGILASLSVLVSAVLTGMLWLSSDFNPAFH 60 Query: 61 ---GEIFAAGLW-----LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 A G W L +D L + + + +GFL ++S+ +MR + Sbjct: 61 QQLWTWMAVGDWNVNIGLSVDRLSLVMITVTSWVGFLIHLFSVPFMRRDFGER------- 113 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIII 171 Y+ + +LF+ ML V ++NLI+++ E L S L+ Y + ++ + K ++ Sbjct: 114 -RYFCYLNLFVAGMLFFVMADNLILLYTGWEIMGLCSYGLISHYYNKEKNVYSGRKAFVV 172 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 +G G +L + +V I + + L+ + L G Sbjct: 173 TRIGDTLLAIGILLAFTVFKTVNLNEIYTIASQQSMNL------WLIGAICLLFLFGGMA 226 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ FP H WLP++ + PS VSAL+ A ++ + ++ R +++ + L+ Sbjct: 227 KSAQFPFHVWLPESMA-GPSTVSALIHAATMVTAGVYLIARNHVLFNLVPDVTWWVSLV- 284 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 G + AA L Q DIKR+LAYS++ +G + LG+G A+ H++ H+ Sbjct: 285 --GAFTAFYAATCALAQNDIKRILAYSTISQIGYMFAALGVG---AYDLAIFHVIVHACF 339 Query: 351 KTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPP-FNIFLSEFM 408 K LLF SG ++ + D+ + G+ K +P+ + G+ +LA +P F S+ Sbjct: 340 KALLFISSGVIIDMFNHDHDIRKMGGLGKRLPWLKWTYLAGSASLAALPVITASFFSKDA 399 Query: 409 TITAG-LARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK------PPQAVNRGDLGWLT 461 I A L+ L L RM V + P+ + L W Sbjct: 400 IIAATETGHLGWLLGALGLAGALFTSIYSFRMYFMVFNGENRTAFSEPRYLKNNGLPWQM 459 Query: 462 TSPMVILLVMMLAMGT 477 IL V +A+G Sbjct: 460 KVSTGILAVGSIAIGW 475 >UniRef50_B1ZSE3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSE3_OPITP Length = 683 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 128/454 (28%), Positives = 203/454 (44%), Gaps = 39/454 (8%) Query: 68 LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 L + +D LG FL + + G IYSIG + G + + Sbjct: 80 LTVRVDALGAFFLVVSSLAGLAISIYSIGAAKGLAGRGNVGVLAALFNALLLAT-----A 134 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLV 186 LV + +L + A E L++ LV + Q + A Y I+ + A + G +L+ Sbjct: 135 LVFMAGDLWLFLGAWELMALTAYGLVSFAHEQPETRRAGVLYFIMSHLDAACVVLGLLLL 194 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 + + S + AI + P AFV L+GFG K G+ P+H WLP AH Sbjct: 195 FQASGSTSFDSLHAI--------GGHMAPGKRDAAFVLFLLGFGIKAGIVPLHIWLPAAH 246 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILV 306 APS VSA +S VL+ + LIR + +L+ G +S + + L+ Sbjct: 247 PVAPSNVSAFMSGVLIKSGIYGLIRVSFDFLGTPPG-WWGMTVLVIGTVSAVLGVLYALM 305 Query: 307 QRDIKRLLAYSSVENMGLVAVELG-----------IGGPLGIFAALLHILNHSLAKTLLF 355 + D+KRLLAY S+EN+G++ + +G L + A L H +NH+ K LLF Sbjct: 306 EHDLKRLLAYHSIENIGIILMGVGTSLLFLHSGHTALATLALIAGLYHTINHATFKGLLF 365 Query: 356 CGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLA 415 G+G VL T ++ + G+ K MP TA F GA+A++ +PP N F+SE++T + L Sbjct: 366 LGAGAVLHATHTHNMEEMGGLAKRMPQTAFCFLIGAVAISALPPLNGFVSEWLTYQSLLQ 425 Query: 416 RNH----------LLIIVLLLLLLTLVLAGLVRMAARVLMAKP--PQAVNRGDLGWLTTS 463 L +L L L A V+ +A+P A + + G + Sbjct: 426 GFDASQSLERLVLPLSGAMLALTGALAAACFVKAYGVTFLAQPRSEAAAHAQEAGPMLRF 485 Query: 464 PMVILLVMMLAMGTHIPQPVIRILAGASTIVLSG 497 M +L+V + +G P VIR+L + ++ Sbjct: 486 GMAVLVVACVLLGL-FPTTVIRLLDPVTQLLTGQ 518 >UniRef50_A8H7R2 NADH dehydrogenase (Quinone) n=8 Tax=Proteobacteria RepID=A8H7R2_SHEPA Length = 492 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 122/482 (25%), Positives = 219/482 (45%), Gaps = 19/482 (3%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLH---SLGITLLLILALWVVQTAAD 59 + + L ++ PL+ + LC+ + RL + V I LL + Sbjct: 2 LAHLPILQVIVPLMAAPLCWFLDRSRLVWLFALLVSGFSCLTSIALLQQVMSSGTILYQL 61 Query: 60 AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 G G+ ID L L L I+ I + + ++ E+ + Sbjct: 62 GGWDAPWGIEYRIDELNALLLLIISTISTIVLFAAQTSLQKELPKERHTLFYSLY----- 116 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFG 179 L L M +V + +L ++ +E ++LS L+ + R +L AA++Y+I+ T+G F Sbjct: 117 LLSLTGMFGIVATGDLFNVFVFLEISSLSGYALIALGKDRRALWAAYQYLIMGTIGATFI 176 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L G L+Y ++ ++A EV + + + AF FL++G K LFP+H Sbjct: 177 LIGIGLLYQMTGTL-NMDDLANRLPEVDQTRT------VFAAFAFLIVGVCLKLALFPLH 229 Query: 240 AWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQ---AIGSDFPNRLLLIFGMLS 296 WLP+A++ APS V+A L+A A+ +LIR+ I + L ++ G++ Sbjct: 230 LWLPNAYAYAPSIVTAFLAATATKVAVYLLIRFTYTIFGIELSFSILPLQNLFMVLGLVG 289 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + A+ + + ++K + AYSS+ +G + + I P G+ A LLH+ NH+L K+ LF Sbjct: 290 IFAASTAAIYKTNVKHIFAYSSIAQVGYMIIGYAINTPTGLMATLLHLFNHALMKSALFL 349 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 G V+ + G+ L+ G+ + MP T G L+L G+P F+S++ + A + Sbjct: 350 ALGAVMYRIGSVQLSQFQGLGRQMPLTMAAIVVGGLSLIGVPLTVGFISKWYLLIAAVEA 409 Query: 417 NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP-PQAVNRGDLGWLTTSPMVILLVMMLAM 475 + VL+LL L + + R+ P P + W P+ +L++ + Sbjct: 410 GMWPVAVLVLLGSLLAVLYIWRIVEIAYFKPPVPGREPVKEAPWTFLVPIWVLVLANIYF 469 Query: 476 GT 477 G Sbjct: 470 GI 471 >UniRef50_B8I2P9 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Clostridium RepID=B8I2P9_CLOCE Length = 688 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 136/525 (25%), Positives = 244/525 (46%), Gaps = 50/525 (9%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAAD----A 60 ++ +L +T L SL ++ K + + +L S +T L+I L + + Sbjct: 11 IICIVLYMTGALTSLASYSSPKWSNRLSNSFALLASSLLTFLMIYKLIYSRDVSTKLDFN 70 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 I + +ID L F+ I+ ++ + ++S YM H + +S + ++ Sbjct: 71 TNIPFLSIEFNIDSLSAFFIMIISIVAVIVSLFSYTYMSHYFSKKNISV-----FGCLYN 125 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVGVAFG 179 LF+ +M+L+V S+N+++ E +L S FLV ++ + +A YII+ +G Sbjct: 126 LFIVSMVLLVASSNMLLFLVFWELMSLISFFLVIYEHEKDEVQKAGRIYIIMTYIGTVCI 185 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 + VL+ A S + + + F+ LL+GFGTK G+ P+H Sbjct: 186 MAAFVLIAAYTGSFNLSSI----------NPQSIPHGSANIIFLLLLVGFGTKAGIIPVH 235 Query: 240 AWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLP AH APS +SAL+S V++ A+ L R+ I G + +L G+ S + Sbjct: 236 IWLPYAHPVAPSNISALMSGVMIKMAIYGLFRFIFNILPVSGL-WWGVAVLCIGIASALI 294 Query: 300 AAFFILVQ-RDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNH 347 + + +IKRLLAYSS+ENMG++ +G+ L + A LLH LNH Sbjct: 295 GIAYSVASTTNIKRLLAYSSIENMGIILAGIGMMMIARASENYPLLSLSLTATLLHTLNH 354 Query: 348 SLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 ++ K+LLF G+G + T+++ + G++K MP +V G L+++ +PPFN F+SEF Sbjct: 355 AVFKSLLFMGAGTIQYSTHTKNMEKLGGLIKKMPAASVFIFIGCLSISAVPPFNGFISEF 414 Query: 408 MTITAGLARNHLLIIVLLLLLLTL--------------VLAGLVRMAARVLMAKPP--QA 451 M ++ LL+ + V V+ + P +A Sbjct: 415 MIFRTIISSISYFAPSENFLLVVILMVAAAALALTGALVAFCFVKFFGISFLGMPRSLKA 474 Query: 452 VNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLS 496 + + G + + V+ L +G +P+ IR++ G + +++ Sbjct: 475 ESAKEPGKPMLAALASAAVLCLLLGI-LPKYAIRLIDGVGSQLIN 518 >UniRef50_Q0W2B5 Hydrogenase, membrane subunit 4-like protein (HycC-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2B5_UNCMA Length = 681 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 142/529 (26%), Positives = 241/529 (45%), Gaps = 50/529 (9%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF 64 +FA L+LT L+ + R+ + A + + A+ ++ + Sbjct: 7 YLFAALVLTSLIGACGAIVLRRNKYCAYVAFGAATMTSVIGATLAAVILLGPGLNPELSP 66 Query: 65 AA-----------GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 + +D L F+ + ++GF +YSIGY R V + + Sbjct: 67 GLRMILPMYTPFGEMSFTVDPLSAFFILAISIVGFAVSVYSIGYSREYVGKYSIGLLG-- 124 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIIC 172 F+LFL +M+LVVT+ N I E ++ S LV ++ ++ A + YI++ Sbjct: 125 ---SIFNLFLLSMILVVTAGNAIQFLIVWEVMSILSYLLVVYENRKKEAVSAGFLYIVMT 181 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTK 232 +G AF G +L+ S ++ + L + LAFV LIGFGTK Sbjct: 182 HLGTAFITVGFLLLATTTGSFD--------FASFKGAGAALPELVKSLAFVLFLIGFGTK 233 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 G+ P+H WLP AH APS VSAL+S V++ A+ +LIR I + + L+L+ Sbjct: 234 AGIMPLHVWLPYAHPAAPSNVSALMSGVMVKTAIYMLIR-CIFEFLGVADTWWGLLVLLV 292 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAAL----------- 341 LS + F L + D+KRLLAYS+VEN+G++ + +G + Sbjct: 293 ASLSAVLGVLFALNETDLKRLLAYSTVENVGIILIAIGASMVFVSYGLKELAALALIAAL 352 Query: 342 LHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFN 401 H NHSL K LLF G+G+VL T+++ ++ G+ K MP+T V F GAL+++ +PP N Sbjct: 353 FHAFNHSLFKALLFMGAGSVLYAVHTKNIELMGGLAKRMPWTGVFFFVGALSISAIPPLN 412 Query: 402 IFLSEFMTITAGLARNHLLIIVLLLLLLTLV----------LAGLVRMAARVLMAKP--P 449 F+SE++ + L + +++ +L+ + A VR +A P Sbjct: 413 GFVSEWLIFQSLLLSFNFPEMIVKILIPVTIGMLALTGALAAACFVRAYGIAFLAAPRTE 472 Query: 450 QAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGT 498 A D+ + M IL V+ + G + ++ + + ++ + Sbjct: 473 HAAEAKDVPVTMLAGMAILAVLCVVTGL-MSVFIVPAIDSVTATIIGTS 520 >UniRef50_B1ZSD9 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria RepID=B1ZSD9_OPITP Length = 662 Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 140/500 (28%), Positives = 216/500 (43%), Gaps = 45/500 (9%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 S+ LL + A R R T+ + + +L Sbjct: 1 MSIGILLLFAAIAFAGAIAVAWRAPRAWLGFTLLGAAAAFVAGARVLVSGAAWDWRSTWV 60 Query: 63 IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 + L + +D + FL +L V+G +YS Y P + ++ L Sbjct: 61 LGGENLHVRLDAVSAFFLVLLAVVGGAASVYSREYWSD-----RAHPRSARSGRAWWTLL 115 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAA-WKYIIICTVGVAFGLF 181 L TM V+ + N + A E +S FL+ QR + AA W Y G Sbjct: 116 LATMGAVLVAANGLHFLIAWELFAVSGYFLITRERQRREVRAAGWLYFAASHAGTLCLFG 175 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 L+ A S ++ D + F L+GFG K GLFP+H W Sbjct: 176 FFTLLAARTGS--------------WDLGAMQDRRELAPLFWLALVGFGVKAGLFPLHIW 221 Query: 242 LPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 LP AH+ APS VSA+LS V L + L+R+ + + + + ++ + G+ S + Sbjct: 222 LPSAHANAPSHVSAILSGVALKMGIYGLVRFSGWLPVPVAAGW---VIALLGVASAVLGV 278 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLA 350 F L Q D+KRLLAY SVEN+G++ + LG G L + LLHI NH L Sbjct: 279 AFALGQHDLKRLLAYHSVENIGIILIGLGFALVATANGEPAWGRLALAGGLLHIWNHGLF 338 Query: 351 KTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 K LLF G+G+VL GTR+++ + G+ + MP+TA F GA+A++G+PP N F+SE++ Sbjct: 339 KALLFLGAGSVLHATGTREMSRLGGLWRTMPWTAGCFTLGAVAISGLPPLNGFVSEWLVF 398 Query: 411 TAGLARNH---------LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV--NRGDLGW 459 + +LL + L LA ++ V + P AV + + G Sbjct: 399 LGLFDAAGAGGLPAWAAVPAAILLGMTGALALACFAKVCGVVFLGLPRSAVAEHAHESGP 458 Query: 460 LTTSPMVILLVMMLAMGTHI 479 L PM++L +A+G Sbjct: 459 LMRGPMLLLAACCVAIGLAP 478 >UniRef50_A9A3Z6 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Thaumarchaeota RepID=A9A3Z6_NITMS Length = 517 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 121/512 (23%), Positives = 212/512 (41%), Gaps = 45/512 (8%) Query: 11 LLTPLLFSLLCF-ACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAG-L 68 + PLL S + + RK + T L T+L++ A G Sbjct: 9 VFLPLLLSPIAYILGRKVGPTPAMWFTFAILLYTTILVVNAALSGTVEEHYPWTEQFGEF 68 Query: 69 WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHG----------------------- 105 +DGL F I+ V+ + +YS YM H+ Sbjct: 69 GFLLDGLASPFAIIIYVLSTILVLYSKPYMIHKFHEQFEEEQKINPSSSGQSSVVESSAL 128 Query: 106 -ELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEA 164 Y+ + +F ML V S NLI + E + FLV ++G + Sbjct: 129 SNYVNAKSGLYFALYLVFAMGMLGTVMSTNLIEFYIFFEVMLIPGFFLVALWGDGPRRKI 188 Query: 165 AWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVF 224 ++ G L G +++ S + S + +++++ + Sbjct: 189 GLMFLFWTHAGAVVLLLGFLMIGLTIGSFDFADI----------KESEIPQDVVMISAIA 238 Query: 225 LLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDF 284 + IG G K +F H WLP H AP+P+SALLS ++ + R + + ++ Sbjct: 239 IAIGLGVKLAVFMFHVWLPYVHGSAPTPISALLSPAMIGIGAYGVFRLIVEFLPSTFAEL 298 Query: 285 PNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHI 344 + I+G++++ L+Q D+KRLLAYSS+ MG + +G +G+ A + Sbjct: 299 -SIWFHIWGLVTMLYGGAMALMQDDLKRLLAYSSISQMGYLLFGIGSMSAMGLAGAEMMY 357 Query: 345 LNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 + H L K +LF +G +++K GTR ++ + G+ MP TAV GAL + G+PP + F+ Sbjct: 358 ITHGLGKGILFMMAGIIIVKVGTRSISKLGGLAGKMPITAVCAVIGALTIMGVPPTSGFM 417 Query: 405 SEFMTITAGLARN-------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR-GD 456 E++ L + L L+ L +A ++ M RV K P+ + + + Sbjct: 418 GEWILFYGALETAIEEGSTLRAVTFGLGLVATALTMAYMLWMLKRVFFGKTPEHLEKVKE 477 Query: 457 LGWLTTSPMVILLVMMLAMGTHIPQPVIRILA 488 W T+PM++L + +G + + IL Sbjct: 478 GSWYMTAPMMVLAGFTVVLGIYPDIFLKTILP 509 >UniRef50_B4RCL7 NADH dehydrogenase I, L subunit n=9 Tax=Proteobacteria RepID=B4RCL7_PHEZH Length = 738 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 107/488 (21%), Positives = 199/488 (40%), Gaps = 44/488 (9%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRK---RRLSATRTVTVLHSLGITLLLILALWVVQTA 57 M V+ +++L PL+ +++ + ++S T +L ++ W Sbjct: 1 MDPKVLVSIILFGPLVGAIVAGLFGRAIPSKVSQAVTTGLLFLSAALSWVVFGQWTWGGL 60 Query: 58 ADAGEIFAAGLW---------LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 +A + +DGL + L ++ + L +YS GYM + Sbjct: 61 EPFTLTYAPFIHVGDFVSNWSFRLDGLSAVMLVVVTSVSSLVHLYSWGYMAEDPHK---- 116 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAA-WK 167 ++ + LF F ML ++++ + + ++ E L+S L+G + ++ + AA K Sbjct: 117 ----PRFFAYLSLFTFAMLALISAADFMQLFFGWEGVGLASYLLIGFWFKKPTANAASIK 172 Query: 168 YIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLL--DPTLMLLAFVFL 225 ++ VG G + V+ S+ + + S + D L+ LA L Sbjct: 173 AFVVNRVGDFGFALGIMTVFWAFGSIQFAEIFPQMQAAAGRAWSFIGYDWNLVDLACALL 232 Query: 226 LIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDF 284 +G K+ F +H WLPDA E P+PVSAL+ A ++ + ++ + A Sbjct: 233 FVGAMGKSAQFFLHTWLPDAM-EGPTPVSALIHAATMVTAGVYMVCLLSPMFEYA---PV 288 Query: 285 PNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHI 344 ++ + G ++ AA L Q DIKR++AYS+ +G + G+G AA+ H+ Sbjct: 289 AKNIVTVIGAVTALFAATVGLTQNDIKRVIAYSTCSQLGYMFFAAGVG---AYQAAMFHL 345 Query: 345 LNHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALA--GMP--- 398 H+ K LLF G+G+V+ +D+ G++K +P T + G +A+ G+P Sbjct: 346 FTHAFFKALLFLGAGSVIHGMAHEQDMRRYGGLVKYLPVTYAVMTIGTIAITGLGIPGVE 405 Query: 399 -PFNIFLSEFMTITAGLARN------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA 451 F F S+ I A V+ + + L R+A Sbjct: 406 LGFAGFYSKDAIIHAAYEAGGAGHPMGYFAFVIGIFVAGLTAFYSWRLAFFTFNGSARWT 465 Query: 452 VNRGDLGW 459 + W Sbjct: 466 SEDLEHHW 473 >UniRef50_B2V8R6 NADH dehydrogenase (Quinone) n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V8R6_SULSY Length = 662 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 130/448 (29%), Positives = 217/448 (48%), Gaps = 43/448 (9%) Query: 63 IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 I +D L F+ ++ ++ F + IYS+ Y++ L+ ++LF Sbjct: 59 IPFLTFSYKVDNLSLFFVGLVSLLSFASSIYSVSYIKEFENQKVLT--------FLYNLF 110 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLF 181 +F+M++V+ S N+ E ++ S LV Y ++ +L A YI + +G F + Sbjct: 111 IFSMIMVILSANVPTFLIWWEIMSVVSFLLVIFDYKKQENLNAGIFYIFMTHLGTTFIII 170 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 +L+Y + S+ + + + E +K L F+ LIGFGTK G+F +H W Sbjct: 171 SFILLYIYSGSLEFKDFVNVNLPEDVK----------FLVFLTSLIGFGTKAGIFLLHFW 220 Query: 242 LPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 LP AH APS VSAL+S V++ A+ +LIR+Y + + F ++L G LS Sbjct: 221 LPKAHPVAPSNVSALMSGVMIKTAIYMLIRFYFEFLKDMPVAF-GYIVLFIGALSAIYGI 279 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGG-----------PLGIFAALLHILNHSLA 350 + VQ DIK++LAYSS+EN+G++ + +G+ + A L H LNH++ Sbjct: 280 LYAYVQTDIKKMLAYSSMENIGIILIAVGLAMIFKSSHVWILMGISFIAVLYHTLNHTVF 339 Query: 351 KTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 K LLF G+G+VL K T+++ + G+ KIMP T +LF G L + +PPFN F+SE++ Sbjct: 340 KGLLFLGAGSVLFKTHTKNMEELGGLNKIMPKTGILFLIGILGITALPPFNGFVSEWLIY 399 Query: 411 TAGLARNHL----------LIIVLLLLLLTLVLAGLVRMAARVLM--AKPPQAVNRGDLG 458 + L + L L +L L L ++ V + + + + Sbjct: 400 QSLLFGSKLNYEFISFTMPLFASVLALTGAFALGSFAKLYGTVFLGIGRTDKVKKASESD 459 Query: 459 WLTTSPMVILLVMMLAMGTHIPQPVIRI 486 + M L M++ +G PV I Sbjct: 460 GFMLTGMGFLAFMVVILGLIPILPVYVI 487 >UniRef50_D0LZ06 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ06_HALO1 Length = 585 Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 116/497 (23%), Positives = 193/497 (38%), Gaps = 35/497 (7%) Query: 17 FSLLCFACRKRRLSATRTVTVLHSLGITLLLILALW--------VVQTAADAGEIFAAGL 68 +LL + R V + SL +T L L ++ Q D I G Sbjct: 17 GALLIMLLPREEAGLCRAVGLGFSL-LTFGLSLGIFGYFESANAQFQLVIDLPWIDGLGA 75 Query: 69 WLH--IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 IDG+ + + + + S + ++ + M Sbjct: 76 HFKLGIDGISLWLVVLTTFTMPIVLLSSYSSIHKRE----------REFVALMLVLELGM 125 Query: 127 LLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLV 186 L S +L + + E + L+GI+G + A+ K++I VG L V Sbjct: 126 LGAFVSLDLFLFYIFWELMLIPMYLLIGIWGGNRRIYASIKFVIYTMVGSLLMLAAIFYV 185 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 Y A V + + + LL + F + F K LFP+H WLPDAH Sbjct: 186 YVVHAEVAGFYTTDLEAVQRV----LLSRDAQVWCFAAFALAFAIKVPLFPLHTWLPDAH 241 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILV 306 +AP+ S +L+ VLL + +R+ + + G+ L I + + A Sbjct: 242 VQAPTTGSVVLAGVLLKFGVYGFLRFAVPMFP-YGTSVVAPYLAILAVAGIIYGALVAFA 300 Query: 307 QRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG 366 Q D+K+L+AYSSV ++G + L GI ++ +L+H L LF G + + Sbjct: 301 QDDVKKLVAYSSVSHLGFCILGLFSMTARGIEGSIFAMLSHGLTTGGLFLAIGVLYERRH 360 Query: 367 TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN------HLL 420 TR + G+ MP A +F L AG+P + F+ EF+TI + L Sbjct: 361 TRRMAEYGGLWAQMPVFAGVFLICTLGSAGLPGLSGFIGEFLTIFGTFTTSAAYLPAPRL 420 Query: 421 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRG--DLGWLTTSPMVILLVMMLAMGTH 478 + L + L L+ M +++ + NRG DL L+VM+ MG Sbjct: 421 LGALAATGVILGAVYLLFMFQKLMFGPITRDANRGLRDLSGREMVVFAPLVVMIFVMGVA 480 Query: 479 IPQPVIRILAGASTIVL 495 PQP ++ + + + Sbjct: 481 -PQPFLKTMEPSVERFI 496 >UniRef50_UPI00016C46D7 NADH dehydrogenase I chain L n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46D7 Length = 652 Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 108/429 (25%), Positives = 192/429 (44%), Gaps = 37/429 (8%) Query: 68 LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 + +D L + L+++ I +++ GYM + ++ LF+F+M Sbjct: 81 FTIAVDPLSAMMLSMITFIATWIALFASGYMHGDGG--------FARFFAVMSLFVFSMC 132 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVGVAFGLFGTVLV 186 +V +NN +++ A E L S LVG Y ++ S AA K ++ +G L G L+ Sbjct: 133 GLVLANNFLLLVAFWEGVGLCSYLLVGYYFEKPSAATAARKAFLVTRIGDTGFLLGIFLL 192 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 + ++ + + + + + + A + L G K+ FP++ WLPDA Sbjct: 193 WKLGG---WHTDLNLLFDHIQRHPP--EQWQLTTACLLLFCGAVGKSAQFPLYVWLPDAM 247 Query: 247 SEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFIL 305 E P+PVSAL+ A ++ + +L R + A + ++ G ++ +AAF L Sbjct: 248 -EGPTPVSALIHAATMVTAGVYLLARCSPLFAMAPDAQI---VVSWVGGITAILAAFIAL 303 Query: 306 VQRDIKRLLAYSSVENMGLVAVELGIGGPL----GIFAALLHILNHSLAKTLLFCGSGNV 361 Q D+KR+LAYS+V +G + + LG G + + AA+ H+ H+ K LLF +G+V Sbjct: 304 AQTDLKRVLAYSTVSQLGFLFLALGTSGTIDPKFAVVAAMFHLFTHAFFKALLFLAAGSV 363 Query: 362 LLKYGTR-DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLA----- 415 + G D+ G+ K+MP T + F GA ALAG+P + F S+ + + + L Sbjct: 364 MHGMGGVIDVRQFGGLRKVMPITHLTFLCGAGALAGVPLLSGFWSKDLILESLLEASETG 423 Query: 416 ----RNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP----PQAVNRGDLGWLTTSPMVI 467 + + ++ L R + + T P+V+ Sbjct: 424 SRYTAGYFALFLVACTTAFLTAFYTFRAYFLTFWGPEKIPHEAGHHAHESPPSMTIPLVV 483 Query: 468 LLVMMLAMG 476 L V LA+G Sbjct: 484 LAVGALAVG 492 >UniRef50_A9QPJ4 Formate hydrogenlyase subunit 3 n=1 Tax=Methylacidiphilum infernorum V4 RepID=A9QPJ4_METI4 Length = 667 Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 128/518 (24%), Positives = 234/518 (45%), Gaps = 51/518 (9%) Query: 11 LLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGL-- 68 LL +F L ++ ++ ++ L+ +++ + +F GL Sbjct: 9 LLLSFVFYLGLILLARKNYRGVYLLSGFYA--GISFLLSLFFLLFHGSSQAAVFPLGLPG 66 Query: 69 ---WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFT 125 ID L FL ++ + F+ +Y +GY H + P F+ LFL + Sbjct: 67 TGAHFRIDSLSAFFLLVVNLASFMASLYGLGYGSHFAEQQRILP--------FYILFLGS 118 Query: 126 MLLVVTSNNLIVMWAAIEATTLSSAFLV-GIYGQRSSLEAAWKYIIICTVGVAFGLFGTV 184 M +V+ + ++ E +LSS LV + ++ + A + Y+++ +G LF Sbjct: 119 MNMVLLAADMFSFLFFWELMSLSSWALVMSSHKEKETAGAGFIYLLMAVLGTFALLFSMS 178 Query: 185 LVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 L+ +++ + + + L L F L G G+K GL P+HAWLP Sbjct: 179 LLASHSGTFSFEG----------MSKAALPSKSASLVFALALFGAGSKAGLVPLHAWLPR 228 Query: 245 AHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFI 304 AH APS VSAL+S V+ A+ +R + + + + LLL+ +S+ + Sbjct: 229 AHPAAPSHVSALMSGVMTKVAVYGFLRIVFDLLR-TQEKWWSYLLLVIAGVSMIAGVLYA 287 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAAL-----------LHILNHSLAKTL 353 L+Q D+KRLLAY ++EN+G+V V +G+ + + H+LNHSL K L Sbjct: 288 LMQHDLKRLLAYHTIENIGIVFVGIGLAMAFKTYGMVAASALSFSASLFHVLNHSLFKNL 347 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 LF G+G++ G+RD+ + G++ MP+TA F G++A+ +PP N F+SE++ + + Sbjct: 348 LFLGAGSIQSSTGSRDMEKLGGLVSKMPYTAFAFLMGSMAICALPPLNGFVSEWLLMQSI 407 Query: 414 LARNHLLIIVLLLLLLTL----------VLAGLVRMAARVLMAKPP--QAVNRGDLGWLT 461 L L L L+ ++ + +++ + +P A+ + + Sbjct: 408 LLSPQLPSWGLKFLVPSIGAFLALSAALAASCFIKVYGITFLGRPRSMSAMAATETDRWS 467 Query: 462 TSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTH 499 + L + L G P PV+ +L A ++ G + Sbjct: 468 LLALYFLAFLCLLWGV-FPAPVLHLLGPAVGLLSGGEY 504 >UniRef50_C7NST6 NADH dehydrogenase (Quinone) n=4 Tax=Halobacteriaceae RepID=C7NST6_HALUD Length = 801 Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats. Identities = 126/483 (26%), Positives = 210/483 (43%), Gaps = 30/483 (6%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 + ++L P L + + R + + LI + + I + Sbjct: 8 VLLVVLALPFLAAAVAPLV-YRLVGERVAYFGAAVAALAFGLIGTQYGAEGVVSIPWIPS 66 Query: 66 --AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 L L++DGL L ++ IG L YS GYM E + +Y +F+ Sbjct: 67 LDVSLALYVDGLSLLLGFVVSGIGILIFTYSGGYMHDEPGKAK--------FYTTLLVFM 118 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVAFGLFG 182 ML V + +L+ ++ E T++SS L+G Y S AA K +II G F L Sbjct: 119 GAMLGVAFAADLLALFVFWELTSVSSFILIGHYQDDPDSQYAARKAMIITVAGGLFLLIA 178 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFL------LIGFGTKTGLF 236 +L++ +A VM A + + +++ + A +F+ +G K+ Sbjct: 179 FLLLHTVSADVMGTATFRLAGEGSMIENAGAMRERLRSAGLFVPVLALLAVGAAAKSAQV 238 Query: 237 PMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGML 295 P+H WLP+A EAP+PVSA L SA ++ + ++ R+ ++ GS L G+L Sbjct: 239 PLHIWLPNAM-EAPTPVSAFLHSATMVKAGVYLIGRFRPLL----GSTEWELLFAGLGLL 293 Query: 296 SVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLF 355 ++ V A + DIK LLAYS+ ++GL+ GI G HILNH+L K LF Sbjct: 294 TMTVGAMLAIKADDIKELLAYSTASHLGLIVAGFGIQYKYGAETGAFHILNHALFKAALF 353 Query: 356 CGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLA 415 +G V + G+R L+ + G+ + +P TA + AL +AG+PPFN F S+ + A Sbjct: 354 LVAGIVAHEAGSRLLSELGGLWRDLPITAAVAVVAALGMAGLPPFNGFYSKELLFEATFH 413 Query: 416 RN------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILL 469 L+ V+ + ++ + +P + +P VIL Sbjct: 414 AAEHAGGLWWLLPVVAVFGSIFTFLYSIKFLSLFFGDRPDALEHVHSPPLPMLAPPVILA 473 Query: 470 VMM 472 + Sbjct: 474 TLA 476 >UniRef50_B6YTY8 Membrane bound hydrogenase, MbhH subunit n=9 Tax=Thermococcaceae RepID=B6YTY8_THEON Length = 532 Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats. Identities = 125/531 (23%), Positives = 228/531 (42%), Gaps = 54/531 (10%) Query: 1 MSYSVMFALLLLTPLLFSL---LCFACRKRRLSATRTVTVLHSLGITLLLILALW----- 52 M+ + L++ PL + + K+ A + + ++ ++ +W Sbjct: 1 MNGEAILPYLIIIPLFGAFAMPIVNLAGKKAREAWAVLISALTFIVSSVIFYHIWNTGEI 60 Query: 53 -----VVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGEL 107 +T G F + +D G + + I+ + + IYSIGYM+H+ Sbjct: 61 IVYTLGAETPFGQGVDFPIRIVWEVDLFGAIMVFIVAFVSLMAVIYSIGYMKHDTG---- 116 Query: 108 SPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAW 166 L YY + ML + + +L + +E +++S LV +EA Sbjct: 117 ----LDKYYTLILILELGMLGIAITGDLFNFYVFLEIMSIASYALVAFRNDTWEGIEAGI 172 Query: 167 KYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLL 226 KY+ + ++ AF L G L+Y ++ + + +A + Sbjct: 173 KYMFVGSIASAFVLLGIALLYGQYGTLT--------MGYLAVKIVQNPTVTAKVALALFI 224 Query: 227 IGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCA-LLVLIRYYIIIC-------- 277 G K+G P+H WL DAH APS +SA+LS +++ + + R I Sbjct: 225 AGLLFKSGASPVHMWLADAHPAAPSSISAMLSGLVIKIGGIYAIARILFSIYTPMAHSIV 284 Query: 278 ------QAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGI 331 I +++IF L++ + ++Q D+KRLLAYSSV +G + + LGI Sbjct: 285 LEAYLQPHINMSAIGWIIIIFACLTLIIGNAMAVIQTDMKRLLAYSSVGQIGYILLGLGI 344 Query: 332 G--------GPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFT 383 G + + A+ H +NH+L K LLF +G V+ + GTR+LN + G+ K MP T Sbjct: 345 SIAAYGTQTGEIALAGAIYHTVNHALMKALLFLVAGVVIHQLGTRNLNELSGLAKTMPKT 404 Query: 384 AVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARV 443 F GA A+ GMPP N F S+++ + A + ++ + ++ A VR+ Sbjct: 405 TFAFLIGAAAIVGMPPLNGFASKWLIYESS-AIFNPILGAIAIIGTAFCTAAYVRVLYTF 463 Query: 444 LMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIV 494 + + D PM++L++ ++ MG Q +++ A+ ++ Sbjct: 464 FGRPSEKVMAAKDPETSMMLPMLLLVLAIIIMGLLPWQISDKVMIPAARML 514 >UniRef50_B6AS28 NADH dehydrogenase (Quinone) n=3 Tax=Leptospirillum RepID=B6AS28_9BACT Length = 686 Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats. Identities = 147/533 (27%), Positives = 237/533 (44%), Gaps = 37/533 (6%) Query: 11 LLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE-IFAAGLW 69 +L L ++L +K + ++ + L + + + V D Sbjct: 23 ILLGALGAVLAGHGKKASALSFGSLLLPALLASIAGVDILIHPVPQTRDLPFGWPGIPFR 82 Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L +D L G FLA+LG + +++IG+ R + + + LFL TM V Sbjct: 83 LALDPLSGFFLAVLGFVSIPVLLFAIGFFRDDSVRKTRWVL------FWLPLFLGTMSGV 136 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVGVAFGLFGTVLVYA 188 + +++++ E LSS FLV + A + Y+++ +G L L+ Sbjct: 137 LLADDVLTFLVFWEGMALSSFFLVVTDISEEGVRKAGFLYLLMAQIGTGLILLSFFLLAD 196 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 ++ + +A L + P + F GFG K G+ P+H WLP+AH Sbjct: 197 GSSPDGGLSSLAFADLSRLP----VSPGIAGWVFFLSFAGFGAKAGIVPLHVWLPEAHPV 252 Query: 249 APSPVSALLSAVLLNCALLVLIRYYI-IICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQ 307 APSPVSAL+S ++L AL +IR + ++ + F +L G LS LVQ Sbjct: 253 APSPVSALMSGLMLKIALYGMIRVDLGLLGVSHLQPFMGVAVLAIGSLSALFGVLHALVQ 312 Query: 308 RDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKTLLFC 356 D KRLLAY S+EN+G++ + G+ + A+L H+LNH+L K+LLF Sbjct: 313 HDPKRLLAYHSIENIGIILIGFGLFLIFRTTGHPVPAAVAFSASLFHVLNHALFKSLLFL 372 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 G+G +L K GT DLN + G+ + MP T+ LF GALA++G+PP N FLSE++T A L Sbjct: 373 GAGTILKKTGTHDLNDLGGLFRTMPATSFLFLVGALAISGLPPLNGFLSEWLTFQAALFA 432 Query: 417 NHLLIIVL----------LLLLLTLVLAGLVRMAARVLMAKPP--QAVNRGDLGWLTTSP 464 L + L L L V++ + +A + S Sbjct: 433 PSLSTFLFQSAVVLSAALLALSSALTAMCFVKVTGVSFFGQARSVRASLVREDRGFELSA 492 Query: 465 MVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTA 517 M IL + L + P PV+ L+ S + A++ W +P ++ Sbjct: 493 MAILALGCLGL-GLFPSPVLSGLSSVSLSLTGQPLPFDAEKDPWLWLVPVSSS 544 >UniRef50_C5NVG1 Na(+)/H(+) antiporter subunit A n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NVG1_9BACL Length = 788 Score = 300 bits (770), Expect = 7e-80, Method: Composition-based stats. Identities = 109/500 (21%), Positives = 218/500 (43%), Gaps = 51/500 (10%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF- 64 M L + P++ RK + V+ I ++ ++ G I+ Sbjct: 1 MLQLAVFLPVIAMFFVPFFRKNFKTIHTGKFVIVVPLILFGYFIS--NLKYIYSGGTIYK 58 Query: 65 --------AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 + L++DGL LF ++ IG L +YS YM ++ L +Y Sbjct: 59 KLAFVSNVGLDINLNLDGLSLLFSLLITGIGTLVILYSCYYMS-------ITDEKLHKFY 111 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVG 175 F +F+ ML VV S+N++ M+ E T++SS L+ + + + + A K +II G Sbjct: 112 IFLLIFMSAMLGVVLSDNMLSMYMFWEMTSVSSFLLISYWHENDASRKGALKSLIITVFG 171 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGL 235 L G ++ S + + ++A + ++ G TK+ Sbjct: 172 GVLMLAGIFILNNITGSFNVSEIIEFTKNHGYNDK-------YVVAMILIIFGAFTKSAQ 224 Query: 236 FPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 FP H WLPDA + AP+P+S+ L SA ++ + +L+R I+ + +L+IFG Sbjct: 225 FPFHIWLPDAMA-APTPISSYLHSATMVKAGIYLLLRIGIVF---SFTSSFGNILIIFGT 280 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGG-----------PLGIFAALLH 343 +++ + + + +D+K +LAYS++ +G++ + +GI +A H Sbjct: 281 ITMLIGSISAIFLKDLKGILAYSTISQLGMMTLMIGIANLGLYNDNHYVYTFAFYAVCFH 340 Query: 344 ILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 I+NH+ K LF +G + + +RD+ + G+ + MP + +L ++AG+PP + F Sbjct: 341 IINHAAFKASLFMITGIIDHSFHSRDIEKLRGIKRYMPLSFILSIIAGFSMAGIPPLSGF 400 Query: 404 LSEFMTITAGLARN-----HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV----NR 454 S+ +T +++I++ +++ + +A + + K ++ Sbjct: 401 YSKEYFLTVVYGLTQSSMLYMIIVIAVVIGALGTAIYSLIVAFKPFLGKFDNSILGNKKL 460 Query: 455 GDLGWLTTSPMVILLVMMLA 474 +IL+V ++ Sbjct: 461 HLPSNGIFISPIILVVFVII 480 >UniRef50_Q28L00 NADH dehydrogenase (Quinone) n=1 Tax=Jannaschia sp. CCS1 RepID=Q28L00_JANSC Length = 782 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 123/481 (25%), Positives = 208/481 (43%), Gaps = 34/481 (7%) Query: 40 SLGITLLLILALWVVQTAADAGEIFAAGL----------WLHIDGLGGLFLAILGVIGFL 89 S+ + L L A AGE G+ + IDGL F ++ IG L Sbjct: 20 SVVVPAALFLWFAQFLPAVAAGETPLIGIDWVPSMDVRLEMLIDGLSLTFALLITGIGTL 79 Query: 90 TGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSS 149 +YS Y+ + + + + F+ ML +V ++NLI ++ E TT+SS Sbjct: 80 VTLYSTRYLGNHPEY--------PRFVLYLLTFMVGMLGLVLADNLIALFVFWEVTTISS 131 Query: 150 AFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLK 208 L+G S +A + +++ G L G +L+ A A + + + ++ Sbjct: 132 YLLIGFTSDSAKSRRSALQALLVTGTGGLALLAGMILLGAAAGTYSLTEIRGM--GDAIR 189 Query: 209 QSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLNCALL 267 Q L P + L G TK+ FP H WLP+A + AP+PVSA L SA ++ + Sbjct: 190 QHDLYIP-----ILILFLAGAFTKSAQFPFHFWLPNAMA-APTPVSAYLHSATMVKGGVY 243 Query: 268 VLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAV 327 ++ R + G++ L+I G + A+ + Q DIK++LAY+++ +G + + Sbjct: 244 LMARMNPTLG---GTEPWFWALVIAGGFTTVFASVLAIRQTDIKQVLAYTTLMALGALTL 300 Query: 328 ELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLF 387 +G G I AA+L ++ HSL K LF G V + GTR++ + G+ + MP T Sbjct: 301 FIGAGSSDAIKAAMLFLVVHSLYKAALFLMIGIVDNQTGTREVAHLRGLARKMPITFFAG 360 Query: 388 GGGALALAGMPPFNIFLSEFMTITAGLA--RNHLLIIVLLLLLLTLVLAGLVRMAARVLM 445 A+++AG+PPF F+ + AGL L II + L+ AR + Sbjct: 361 ALAAISMAGIPPFVGFIGKEFLYKAGLEIDTAGLWIIGTIFAASVLMFVAAGISVARPFL 420 Query: 446 AKPPQAVNR-GDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQ 504 + P + +IL + L G P + ++ A+ V + Sbjct: 421 GRLPDRFKDTTEGPISMWLGPIILGALSLYFGIFADIPEVWLVGPATDAVYGSDVSVDLY 480 Query: 505 R 505 Sbjct: 481 L 481 >UniRef50_UPI00005100B6 putative monovalent cation/H+ antiporter subunit A n=1 Tax=Brevibacterium linens BL2 RepID=UPI00005100B6 Length = 1024 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 125/516 (24%), Positives = 227/516 (43%), Gaps = 40/516 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 + AL+++TP + +L A +A + L + T ++A + + F Sbjct: 8 LAALIIVTPFITRVLGRASGWLLAAAYLGIAGLFTP--TAAEVMAGSTPEVSYQWIPAFG 65 Query: 66 AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFT 125 L L DG+G +F I +IG + +YS GY+ +Y +F F+ Sbjct: 66 VDLALRADGIGVIFTYIALIIGAVVFVYSTGYLDR---------GRNTSFYWLMVIFTFS 116 Query: 126 MLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVL 185 M+++V SN+L+V++ E T+L+S FL+ G A + + I +G L T + Sbjct: 117 MVMLVLSNDLLVLFVCWELTSLASFFLIARSGSPGQAPA-LRTMFITFIGGLSLLVATGV 175 Query: 186 VYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDA 245 + A + ++ + L V + + TK+ FP H+WLPDA Sbjct: 176 IIAVTGTTNVHEALSSPVWSA-------QSPVTSLVAVLIAVAAMTKSAQFPFHSWLPDA 228 Query: 246 HSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFI 304 + A +PVSA L A ++ + +L+R+ + N LL++ G+++ + +F Sbjct: 229 MAAA-TPVSAYLHAAAVVKAGIFLLLRFTPAFH---ATPAWNTLLIVAGLITACIGGWFA 284 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK 364 L Q D+K+L+AYS+V +GL+ +GIG I AA LH++ H+L K+ LF G V Sbjct: 285 LNQYDVKKLMAYSTVSQLGLITAVIGIGSEAAIAAATLHVIAHALFKSGLFMMVGVVDHL 344 Query: 365 YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA-----GLARNHL 419 GTR+L + +++ P + ++ G +++G+PP F+S+ TA G A Sbjct: 345 AGTRELTRIPQLMRAAPASFIVMIVGCASMSGIPPLLGFVSKEALFTAFGDTPGSAWTGW 404 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLM-AKPPQAVNRGDLGWLTT----SPMVILLVMMLA 474 +++ + L A + + KP G + P++ + + A Sbjct: 405 AALLVAVGASVLTFAYCAKTVWGAFIDGKPVDRARLGHGSPVMLIAAAVPILASIPLSFA 464 Query: 475 MGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHD 510 + P+ + + A P + WH Sbjct: 465 LFVFD-NPISQAVRAALYE-----STGPVHLALWHG 494 >UniRef50_C2KMP0 NADH dehydrogenase (Quinone) n=2 Tax=Mobiluncus mulieris RepID=C2KMP0_9ACTO Length = 710 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 113/498 (22%), Positives = 213/498 (42%), Gaps = 49/498 (9%) Query: 9 LLLLTPLLFSLLCFACRKRRLSATRTVTVLHS-----LGITLLLIL--------ALWVVQ 55 L++ PL+ +L +R + ++VL S +G +L+ + A V Sbjct: 69 LMIAIPLVSALFLLVAGRRVDAWGHWLSVLASWVAFGIGGGVLVEMLGRAPEARAQAVTL 128 Query: 56 TAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 G L +D L F+ ++ +G L +YS+GYM H+ + Sbjct: 129 WQWLPGTELQVNFGLLLDPLSISFVMLVTFVGSLIHVYSVGYMEHDPDRR--------RF 180 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTV 174 + + +LF+ ML +V N+ +V++ E L+S L+G + Q ++ AA K ++ V Sbjct: 181 FAYLNLFVAAMLTLVLGNSYLVLFMGWEGVGLASYLLIGFWNQVHNNALAAKKAFVMNRV 240 Query: 175 GVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 G L + ++A +V + + +FLL+ K+ Sbjct: 241 GDLGLLIAMMAMFARFGAVDFATVLGE------PAGNSGGIPWATFIGMFLLLAACGKSA 294 Query: 235 LFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFG 293 FP+ AWL DA + P+PVSAL+ A ++ + +++R I Q + + I G Sbjct: 295 QFPLQAWLGDAMA-GPTPVSALIHAATMVTAGVYLMVRSGAIYVQTPVAALA---VAIIG 350 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 +++ A + D+K++LA S++ +G + + G+G P+G A+ H++ H K Sbjct: 351 AITLVFGAVVGCAKDDMKKVLAASTMSQIGYMMLGAGLG-PVGWAFAIFHLVMHGFFKAQ 409 Query: 354 LFCGSGNVLLKYGTR-DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LF +G V+ + ++ G+ ++M T F G LA+ G+PPF+ F S+ I A Sbjct: 410 LFLAAGCVMHAMSDQVNMRRFGGLRRVMKITWFAFLVGWLAILGIPPFSGFFSKDKIIEA 469 Query: 413 GL-------ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP-------QAVNRGDLG 458 + + L+ + + R+ + P V+ + Sbjct: 470 AFLPNPHYGEWYPWVFGLTALVGAGITAFYMSRLFFLIFHGSPRWTTELEGAPVHPHEAN 529 Query: 459 WLTTSPMVILLVMMLAMG 476 T P+++L V +A G Sbjct: 530 AWMTVPLLVLSVFSIAAG 547 >UniRef50_B0VE74 pH adaptation potassium efflux system transmembrane protein n=22 Tax=cellular organisms RepID=B0VE74_ACIBY Length = 949 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 132/499 (26%), Positives = 224/499 (44%), Gaps = 39/499 (7%) Query: 33 RTVTVLHSLGITLL----------LILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAI 82 R VT L ++G++L +L +Q + D L +D LG LF + Sbjct: 29 RGVTALGAIGVSLTSFGLLLTQAKTVLGGASIQQSWDWLPQLGINLSFRLDALGLLFSLL 88 Query: 83 LGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAI 142 + IG L + +L Y LF+ ML + SNNLI++ Sbjct: 89 ITGIGTLIY--------IYAYYYLGPKNSLSKLYLLLMLFMAAMLGISLSNNLIILLVFW 140 Query: 143 EATTLSSAFLVGIY-GQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAI 201 E T++SS LVG + ++ + + I +G L G VL+ + + + Sbjct: 141 ELTSISSFLLVGYWSHYEAAQRGSRMALTITGMGGLAMLGGFVLLGQITGTYEINDIVGM 200 Query: 202 FWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALL-SAV 260 + L + + +L+G TK+ FP H WLP+A + AP+PVSA L SA Sbjct: 201 KDL-------IQSHYLFVPTLLLILLGAFTKSAQFPFHFWLPNAMA-APTPVSAYLHSAT 252 Query: 261 LLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVE 320 ++ + +L R I IG+ + ++ G+ ++ +AA F + + D+K LLAYS++ Sbjct: 253 MVKAGIFLLARLAPIF---IGAALYHNIVTFVGLFTLCMAACFAIFKEDLKGLLAYSTIS 309 Query: 321 NMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIM 380 ++GL+ LGIG PL + AA+ HI+NH+ K LF +G + + GTRDL + G+ +++ Sbjct: 310 HLGLIVCLLGIGSPLAVAAAIFHIINHATFKAALFMIAGIIDHETGTRDLRKLSGIWQLL 369 Query: 381 PFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLA----RNHLLIIVLLLLLLTLVLAGL 436 PFTA L A ++AG+P N F+S+ M T LA + ++ L ++ Sbjct: 370 PFTATLTMITAASMAGVPLTNGFISKEMFFTELLASLSGSTVIFASIIATLAGIFAVSYS 429 Query: 437 VRMAARVLMAKPPQAV----NRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGAST 492 +R+ V P N + +P ++L + + +G V ++ + Sbjct: 430 IRLVHGVFFDGPVGKQVPNKNAHEPPIGMRAPAILLATLCILVGIFPALLVEPLVNSVTR 489 Query: 493 IVLSGTHDLPAQRSTWHDF 511 L + WH F Sbjct: 490 ASLMQPDFAGTHLAIWHGF 508 >UniRef50_P23482 Hydrogenase-4 component B n=69 Tax=Bacteria RepID=HYFB_ECOLI Length = 672 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 126/536 (23%), Positives = 228/536 (42%), Gaps = 45/536 (8%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKR-----RLSATRTVTVLHSLGITLLLILALWVVQ 55 M + L+ L SL +LS ++ I+ + L V Sbjct: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 Query: 56 TAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 A A A L L +D L + ++ ++ + +YS+ YMR G + Sbjct: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG----- 115 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVG 175 F ++F+ +M+ ++ +N E +LSS FLV ++S+ A Y I G Sbjct: 116 -FFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAG 174 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGL 235 + +L+ + S+ + + L P L F+ GFG K G+ Sbjct: 175 SVLIMIAFLLMGRESGSLDFASFRTLS----------LSPGLASAVFLLAFFGFGAKAGM 224 Query: 236 FPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD-FPNRLLLIFGM 294 P+H+WLP AH APS SAL+S V++ + +++ + + G + L++ G Sbjct: 225 MPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGA 284 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLH 343 +S + + L ++DIKRLLA+S+VEN+G++ + +G+ +G+ AL H Sbjct: 285 ISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFH 344 Query: 344 ILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 +LNH+L K LLF G+G ++ + T D+ + + K MP+TA G LA++ +PP N F Sbjct: 345 LLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGF 404 Query: 404 LSEFMTITA----------GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP--QA 451 +SE+ T + L + +V+L + L + V+M P A Sbjct: 405 ISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA 464 Query: 452 VNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRST 507 ++ M++L + + + +I+ A + + + + Sbjct: 465 EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIAL 520 >UniRef50_A6G6F5 NADH dehydrogenase/oxidoreductase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G6F5_9DELT Length = 512 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 112/490 (22%), Positives = 216/490 (44%), Gaps = 20/490 (4%) Query: 2 SYSVMFALLLLTPLLFSLLCFACRKRRLSATRTV---TVLHSLGITLLLILALWVVQTAA 58 + L+++ PL LL R T L + + + + L+ V T Sbjct: 8 FRPHLPVLVVILPLFGGLLAPFTALIRRGGGIFAWLWTALITAAVFVCATVLLYDVHTGG 67 Query: 59 D------AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 + G+ +D L + ++ +I FL IY+ + E+ Sbjct: 68 EAITYRLGSWPEQYGIGYTVDSLNAYVIFVVALIAFLATIYA-----KDSVIDEIVIDRH 122 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG--QRSSLEAAWKYII 170 +Y + L + +L + + + ++ +E ++L+ L+ + G R +L A+ KY++ Sbjct: 123 HLFYTVWMLAIAGLLGITVTGDTFNIYVLLEISSLTVYTLIAMGGERDRRALVASLKYLV 182 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 + ++G F L G + ++ A+M E+ + L ++++F FL++G Sbjct: 183 LGSIGATFILLGIGYLLMLTGTL-NMADMHAKLVEMHQAGELAGNKTVMVSFAFLMVGLS 241 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRL-- 288 K LFP+H WLP+A++ APS VSAL+++ + + R+ I D L Sbjct: 242 LKMALFPLHLWLPNAYTYAPSSVSALVASTATKVGVYMTFRFVFTIYGGGVFDSGEDLHF 301 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 L + + V++F + Q ++KR+LAYSSV + + + + G+ A+++HI NH+ Sbjct: 302 LALCASAGIVVSSFSAIRQVNVKRVLAYSSVGQIAYIVLGFSLANQDGVTASVIHIFNHA 361 Query: 349 LAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 + K +F G V L+ G ++ + G+ K MP TA F G L G+P F+S++ Sbjct: 362 VIKGGMFMAIGAVALRMGGTSVDDIKGIGKRMPLTAAAFTVGGCGLIGVPLTAGFVSKWY 421 Query: 409 TITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR-GDLGWLTTSPMVI 467 + + + + ++LL L L + R+ + +P + PM I Sbjct: 422 LVVGTMQEGYWYLAFVVLLGGVLALIYVWRLIEMIWFHEPVDPDKEVEEAPLSMLIPMWI 481 Query: 468 LLVMMLAMGT 477 L+ + G Sbjct: 482 LIGASVFFGV 491 >UniRef50_Q21AT7 NADH dehydrogenase (Quinone) n=16 Tax=Alphaproteobacteria RepID=Q21AT7_RHOPB Length = 687 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 148/520 (28%), Positives = 239/520 (45%), Gaps = 55/520 (10%) Query: 30 SATRTVTVLHSLGITLLLILAL-----WVVQTAADAGEIFAAGL-----WLHIDGLGGLF 79 S TR T + TL+ AL W+ AA + GL +D L F Sbjct: 42 SRTRAATAVVYGATTLVCAGALIGALRWLFAGAAADELVLPIGLPWLGAHFRLDALAAFF 101 Query: 80 LAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMW 139 L ++ + G + +Y++GY +HE A + P FF FL M LVV + + Sbjct: 102 LGVVNLGGAVASLYALGYGQHETAPQRVLP--------FFPAFLAGMNLVVLAADAFSYL 153 Query: 140 AAIEATTLSSAFLVG-IYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAE 198 E +L+S LV + + + A + Y+++ + G L L+ A A Sbjct: 154 LCWEFMSLASWALVMTHHREPGNARAGYVYLLMASFGTLALLLAFGLLAGPAGDYGFAAI 213 Query: 199 MAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS 258 A+ + P L + +L+G G+K GL P+H WLP AH APS VSAL+S Sbjct: 214 RAMPHA----------PAEATLVLILMLLGAGSKAGLVPLHVWLPLAHPAAPSHVSALMS 263 Query: 259 AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSS 318 V+ A+ IR + + L+L G ++ + + L+++D+KRLLAYS+ Sbjct: 264 GVMTKVAVYGFIRVVFDLLGPPNWT-ASVLVLSLGGVTAVMGILYALLEKDLKRLLAYST 322 Query: 319 VENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGT 367 +EN+G++ V LG+ L AAL H+ NHSL K+LLF G+G VL+ G Sbjct: 323 IENIGIIFVCLGLALAFQANGQTLAASLAFTAALFHVFNHSLFKSLLFFGAGAVLVATGA 382 Query: 368 RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLL 427 RD++ + G++ MP T+V+F G +A++ +PPFN F+SE++ A L L L ++ Sbjct: 383 RDMDRLGGLIHRMPVTSVVFLIGCVAISALPPFNGFVSEWLMFQAVLLSPSLPQWGLKIM 442 Query: 428 LLTL----------VLAGLVRMAARVLMAKPPQ--AVNRGDLGWLTTSPMVILLVMMLAM 475 + + A V+ +++P A N ++ + + MVIL + L Sbjct: 443 VPAIGALLALAAALAAACFVKAYGVSFLSRPRSDAAANAQEVDRFSLAAMVILASLCLLA 502 Query: 476 GTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSG 515 G P VI L+ + +L + + W +P Sbjct: 503 GI-FPGLVIDALSPVTQQILDSRLAVQSHL-PWLSIIPIA 540 >UniRef50_D0LWA1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LWA1_HALO1 Length = 827 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 128/465 (27%), Positives = 214/465 (46%), Gaps = 20/465 (4%) Query: 63 IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 + +DGL LF ++ IG L IY+ GY+ G ++ LF Sbjct: 69 WLPDAVAFRLDGLALLFAVLITGIGALVLIYAGGYLGEHPRRG--------TFFASLFLF 120 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLF 181 + ML +V S++ I ++ E T+++S L+G QR + AA K ++I G L Sbjct: 121 MAAMLGIVVSDDAIALFVFWELTSVASFLLIGFEDQRPEARVAARKALLITGAGGMALLV 180 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 G VL+ A + + A S L + L + L A + +L+G TK+ P H W Sbjct: 181 GLVLLAHAAMDLGLSSADATRISR-LSEVPLREHPLYTPALLLVLLGAFTKSAQVPFHIW 239 Query: 242 LPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 LP A + AP+PVSA L SA ++ + +L R + G+ L+ G+L++ VA Sbjct: 240 LPAAMA-APTPVSAYLHSATMVKAGVFLLARLSPALG---GTLLWQGSLITAGVLTMLVA 295 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 + + QRD+KR+LAYS+V +G++ + LGIG + AA++ ++ H+L K LF +GN Sbjct: 296 GYLAVRQRDLKRILAYSTVAVLGILVMLLGIGDRHAVEAAIVFLVAHALYKAALFMVAGN 355 Query: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL- 419 + GTRD+ + G+ + MP T AL+ AG PP FL + + + L R+ L Sbjct: 356 IDHGTGTRDVGRLGGLRRAMPLTCAAALLAALSKAGAPPMFGFLGKELLYGSRLTRDDLS 415 Query: 420 --LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGT 477 LI + + +TLV A + ++ ++ +L + G Sbjct: 416 ALLIAAAVAVNITLVAAAFLVGVRPFFGSRRETPHAPHEMPPSMWLGPALLAAGGIFAGL 475 Query: 478 HIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEK 522 +P P L ++ ++G + + WH P + Sbjct: 476 -VPGPFAHTLGSSAVAAITG-QPARVELALWHGVNPEALLILGLS 518 >UniRef50_Q6L0I7 NADH-quinone oxidoreductase chain L n=1 Tax=Picrophilus torridus RepID=Q6L0I7_PICTO Length = 607 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 107/444 (24%), Positives = 209/444 (47%), Gaps = 27/444 (6%) Query: 49 LALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 ++ + ++ID L + I+ + + ++S+ YM + + Sbjct: 44 AYIYGGNIYVHYTWFYNIDFGIYIDHLSLIMAFIVSSVSLIINVFSVFYMGKDPRNR--- 100 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWK 167 Y+ +F+ +ML +V S+NL+ + E + S L+G + + ++ AA K Sbjct: 101 -----TYFSEISIFVASMLGLVLSSNLVFTFLFWELVGIMSYLLIGFWYFKPNAAYAAKK 155 Query: 168 YIIICTVGVAFGLFGTVLVYANAASVMPQAEMAI--FWSEVLKQSSLLDPTLMLLAFVFL 225 ++I G + G ++Y + + P + ++I S S ++ + L+ +F+ Sbjct: 156 SLLITRFGDLSFIIGLSIIYVSLNRIDPASPLSIPYLISNSGYISKIIGKYTLTLSLMFI 215 Query: 226 LIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDF 284 IG +K+ FP+H WLPD+ E P+ VSAL+ A ++ + ++ R + + + Sbjct: 216 FIGALSKSAQFPLHVWLPDSM-EGPTTVSALIHAATMVTAGVYIIARLFPLFYY----SY 270 Query: 285 PNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGG---PLGIFAAL 341 + I G ++ + A + D+KR+LAYS++ +G + LG+ G G+ A+ Sbjct: 271 SMYTIAIIGSVTAILGALMGIAVNDMKRILAYSTMSQLGYMFSALGMSGIFFYSGVSFAM 330 Query: 342 LHILNHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 +L H++ K LLF + V++ TRD+ + G+ + MP TA+L G++ LAG+PP Sbjct: 331 YQLLVHAVFKALLFMSAAVVMMYTLETRDIRSLGGLFRKMPATAILMLIGSITLAGIPPT 390 Query: 401 NIFLSEFMTITAGLAR----NHLLIIVLLLLLLTLVLAGLVRMAARVLMA--KPPQAVNR 454 F S+ + G A ++L +LLL+ + + RM + + K A N Sbjct: 391 AGFYSKDEIVFLGYAYFERTGNILPFMLLLITEAVTSIYIFRMYFNIFLGKTKTKAAENA 450 Query: 455 GDLGWLTTSPMVILLVMMLAMGTH 478 D ++ P++IL + L +G Sbjct: 451 KDPKFIYLIPLIILAFLSLFLGPF 474 >UniRef50_Q6APE8 Probable hydrogenase, component B-formate hydrogenlyase subunit 3 n=1 Tax=Desulfotalea psychrophila RepID=Q6APE8_DESPS Length = 652 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 148/518 (28%), Positives = 241/518 (46%), Gaps = 44/518 (8%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLH-SLGITLLLILALWVVQTAAD 59 M+ ++ +L +FSLL + +T + ++GI + I V + Sbjct: 2 MNIFLLSLTVLFVGGIFSLLSYRHFNVMKVGYVIITAVGCAIGIYAITIPLHGAVVPSFS 61 Query: 60 AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 + L +D L FL + V+ L +YS YM G + + FF Sbjct: 62 RPWLHLFTLSFSLDALSAFFLIPIFVVCPLAALYSYHYMDKIEEKGRIGVS-----FFFF 116 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAF 178 +L L +M LV ++N+I E +LSS FLV Y + + A + Y + G F Sbjct: 117 NLLLISMALVTAADNIISFLLVWELMSLSSFFLVIHDYQEEDTRRAGYIYFVFAQAGAMF 176 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 + L Y+ + L + L+ F L+GFG+K G+FP+ Sbjct: 177 IIAALALAYSQTG------------IHDFAAFATLPAHIKLIVFFLALVGFGSKAGIFPL 224 Query: 239 HAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 H WLP AH AP +SA++S V++ + +IR Y+ + S + +L GM+S Sbjct: 225 HMWLPHAHPAAPCHISAIMSGVMIKMGIYGIIRLYVELEDT--SLIIGQTVLTLGMISGI 282 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNH 347 + + L ++DIK++LAYSSVEN+G++ + GIG G LLH+LNH Sbjct: 283 LGVVYALGKQDIKKVLAYSSVENIGVILIGAGIGMMGMSTGNMVMASFGFAGCLLHVLNH 342 Query: 348 SLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 SL KTLLF G+G ++ K GTR L+ + G++K +P T F G+++++G+PPFN F+SEF Sbjct: 343 SLFKTLLFLGAGAIVQKTGTRRLDELGGLIKRLPLTGKSFLAGSVSISGLPPFNGFISEF 402 Query: 408 MTITAGLAR---------NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP--QAVNRGD 456 + +L I+ L ++ L + RM + + +P +A + Sbjct: 403 LIYYGAFHGLSLKGSAFLFAMLSILALAIIGGLAASCFTRMMGIIFLGEPRTAKAAKATE 462 Query: 457 LGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIV 494 G+ T PM+ L L +G P P + I+ A + Sbjct: 463 AGFTMTLPMIFLAASCLFIGL-FPAPFVGIVFSALASI 499 >UniRef50_Q2RXM6 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM6_RHORT Length = 505 Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 118/415 (28%), Positives = 194/415 (46%), Gaps = 24/415 (5%) Query: 68 LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 L +D L L L ++ + GFL +YS GYM S L YY F LF+ M+ Sbjct: 92 FGLALDPLSCLMLVVITLCGFLVVLYSGGYMSLGNVE-HPSDANLARYYFFVCLFITAMV 150 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVY 187 +V+S N ++ E TTL S L+ YG +L++A+K ++I F VL+Y Sbjct: 151 GLVSSPNYFQLFLFWELTTLCSWGLISFYGDAEALKSAYKALLITHGAGLFLAAAVVLIY 210 Query: 188 ANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHS 247 S A +LL P L L F+ I K FP WLP A + Sbjct: 211 VETGSFAFDAI------------NLLTPGLKSLVIAFMGIAALAKAAQFPFFTWLPTAMA 258 Query: 248 EAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILV 306 AP+P S+ L A ++ + +L R + L + ++++ +A Sbjct: 259 -APTPASSYLHAAAMVKAGIYLLARLA--LSVDAFPPELGLALSVIAIVTMCLAVVLYFP 315 Query: 307 QRDIKRLLAYSSVENMGLVAVELGIG---GPLGIFAALLHILNHSLAKTLLFCGSGNVLL 363 Q D+KRLLA+S++ N+G + + + +G + +LH++ HS K+LLF G + Sbjct: 316 QDDLKRLLAFSTIANLGYMVLGIAMGAMGSRTALEGGMLHLVGHSFTKSLLFLAVGAISY 375 Query: 364 KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIV 423 GTR + ++ G+ + MP TA+ F GA+A++GMPPFN+F S+++ ++ + + Sbjct: 376 ATGTRKIGLLSGLGRKMPVTALAFVLGAMAISGMPPFNMFWSKYLIVSGAIELSSTWGWT 435 Query: 424 LLLLLLT---LVLAGLVRMAARVLMAK-PPQAVNRGDLGWLTTSPMVILLVMMLA 474 L +L L A + + +V P A N D G P+++L+ + Sbjct: 436 LAVLTLAESVAGFAWFLHIVHKVFFGPVSPTAENARDPGAAMLIPLIVLMAFSVL 490 >UniRef50_Q67KP4 NADH dehydrogenase I subunit L n=1 Tax=Symbiobacterium thermophilum RepID=Q67KP4_SYMTH Length = 685 Score = 298 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 103/453 (22%), Positives = 188/453 (41%), Gaps = 34/453 (7%) Query: 42 GITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHE 101 G L + W + + + +D L L L ++ ++ YS YM + Sbjct: 63 GEVLYNTVPAWKASFDWASFGPYTVRMGFQVDNLTALMLPMITLVSVCVQYYSSAYMHGD 122 Query: 102 VAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS- 160 + +Y +LF ML++V ++NL ++ A E L S L+G + +++ Sbjct: 123 K--------RIPRFYAALNLFTMAMLVLVMADNLFLLLVAWEIMGLCSYLLIGHWYEQAW 174 Query: 161 SLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLL 220 K + VG + G +V+ A + V ++ +L+ L Sbjct: 175 PRYGQIKAFLTTRVGDIGMMVGIFIVFFAARDLTWAGLAEKVPVLVQDPAT---ASLLAL 231 Query: 221 AFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQA 279 L G K+ FP+H WLPDA + P+P SA++ A ++ + ++ R ++I Sbjct: 232 GAFLLFTGAIGKSAQFPLHTWLPDAMA-GPTPGSAIIHAATMVAAGVYLVGRAFMIFGHV 290 Query: 280 IGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFA 339 + ++ G + AA ++ DIK +LAYS++ +G + + +G+G G A Sbjct: 291 PA--WVLVVVTFVGAFTSLFAASIATLRWDIKEVLAYSTISQLGYMIMAMGLG---GWTA 345 Query: 340 ALLHILNHSLAKTLLFCGSGNVLLKYGT-RDLNVVCGMLKIMPFTAVLFGGGALALAGMP 398 H+L H+ K LLF +G+V+ + + L+ + G+ K +P T + G ALAG+P Sbjct: 346 GNFHLLTHAFFKALLFLAAGSVIHAHHHNQLLHKMGGLRKKIPITFWTWMVGYAALAGIP 405 Query: 399 PFNIFLSEFMTITAGLARNHLLI-----------IVLLLLLLTLVLAGLVRMAARVLMAK 447 F+ F S+ + A L ++ L+ + L L + R + Sbjct: 406 GFSGFFSKDELLLAALEWHNPLVATWPIWLQKLPFAMALTTAFLTAYYMTRATYLAFFGE 465 Query: 448 PPQ---AVNRGDLGWLTTSPMVILLVMMLAMGT 477 P + T P++IL V G Sbjct: 466 PRDMHLYEQAHESPKAMTIPLIILAVPAALYGW 498 >UniRef50_Q9HJK6 NADH dehydrogenase, chain L related protein n=6 Tax=Thermoplasmatales RepID=Q9HJK6_THEAC Length = 635 Score = 298 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 113/497 (22%), Positives = 215/497 (43%), Gaps = 30/497 (6%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRK---RRLSATRTVTVLHSLGITLLLILALWVVQTA 57 M+ + ++ ++PL+ LL K R A + + + +++ + Sbjct: 1 MTMYIYGWMIFISPLIGFLLTLIIGKYYRRWSGAIASFFIFLAFIFSVITYFTVIKHPIY 60 Query: 58 ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 + ++ID L + ++ + + +++I YM+ + Y+ Sbjct: 61 NSYTWFYNIDFGIYIDNLAIVMAMMVSFVSLMIHLFAIYYMKDDPNKH--------VYFA 112 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYIIICTVGV 176 LF ML +V S+NL++++ E L S L+G + + ++ AA K I+ VG Sbjct: 113 ETALFTAGMLGLVISSNLVLLFLFWELVGLCSYLLIGFWFFKPNATAAAKKAFIVTRVGD 172 Query: 177 AFGLFGTVLVYANAASVMPQ-AEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGL 235 + G ++Y + +V + S + + + + +F+L K+ Sbjct: 173 LSFIIGMSILYYSLINVTKDPLSIPYLISNASSIAVAIGKVRLGIIAIFILGAAIGKSAQ 232 Query: 236 FPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 FP+H W+PDA E P+ VSAL+ A ++ + ++ R + + A + F + I G Sbjct: 233 FPLHVWIPDAM-EGPTTVSALIHAATMVTAGVYLVARLFQVFLYA--APFAMYAVAIVGS 289 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG---GPLGIFAALLHILNHSLAK 351 + A LV D+KR+LAYS++ +G + +G+ G + + + H+++H++ K Sbjct: 290 FTALYAGIVGLVVNDVKRILAYSTISQLGYMLAAIGLAPIIGGVAVSLGMFHLISHAIFK 349 Query: 352 TLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 LLF +G L+ RD + G+ K MP T LF G+LAL P + + S+ I Sbjct: 350 ALLFMSAGAFLVAMMDLRDAKQMGGLWKRMPVTTTLFFIGSLALVAFPGTSGYFSKDPII 409 Query: 411 TA-------GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ--AVNRGDLGWLT 461 A L+ L ++ L+ L RM V + KP A D + Sbjct: 410 FASYNYFTKSLSVAGFLPLLFLMTGSLLTTLYTFRMFFLVAVGKPRSTLAERARDPPIVA 469 Query: 462 TSPMVILLVMMLAMGTH 478 P+++L + L +G Sbjct: 470 LLPLMVLSIFALILGVW 486 >UniRef50_C0WGQ4 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=2 Tax=Corynebacterium RepID=C0WGQ4_9CORY Length = 1002 Score = 298 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 123/529 (23%), Positives = 216/529 (40%), Gaps = 48/529 (9%) Query: 9 LLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGL 68 L+LL L+ + + + + G+ + LA + T D G + Sbjct: 2 LILLGALIVATVVAPLLIMNVGRPAFGLLAIVPGVGFVWTLAHFARGTFRDGGTLNYTIE 61 Query: 69 W---------LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 W L +D LGGLF I+ +G L +Y GY + L + G Sbjct: 62 WMPAAHLAVDLRMDALGGLFSLIILGMGALVLLYCWGYFD-------STRRRLAMFAGQM 114 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVAF 178 F M +VTS++L++M+ E T+L S LV Y +R+S AA + +++ +G Sbjct: 115 VGFATAMFGLVTSDSLLLMYVFWEITSLLSYLLVSYYAERASSRRAAQQALMVTVLGGLS 174 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 L G L+ A +SE+ + +A V +L+G TK+ + P Sbjct: 175 MLMGICLLGRQTG--------AWTFSEIHAYDHFPQTPYVTVAIVLILVGALTKSAIVPA 226 Query: 239 HAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSV 297 H WLP A + AP+PVSA L SA ++ + ++ R + + + +++ G+ ++ Sbjct: 227 HFWLPGAMA-APTPVSAYLHSAAMVKAGIYLVARLAPDMYEVA---TWHLVVISLGVFTM 282 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 + + L Q+D+K +LAY +V +G + + +G + A L HSL K LF Sbjct: 283 LLGGWMALKQKDLKLILAYGTVSQLGFITSIVAVGSREAMQAGLALTFAHSLFKAALFMV 342 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 G + GTRD+ + G+ + PF L AL++AG+PP F+S+ + + + Sbjct: 343 VGAIDHCSGTRDITKLSGLGRRQPFLYSLALISALSMAGVPPLFGFVSKEAVLESTMHEG 402 Query: 418 HLL------IIVLLLLLLTLVLAGLVRMAARVLM---------AKPPQAVNRGDLGWLTT 462 L+ I+V + L +A +R + Sbjct: 403 LLIGMPRNMILVAYVAGSILTMAYALRFLWGAFASKNLPHDKDGVSAAVATMHKVNVGLW 462 Query: 463 SPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDF 511 +L + +A+G I + +G H + WH + Sbjct: 463 LAPAVLTALTIALGLAPQALSAAIDQHLDSTFGAGEHH---GLALWHGW 508 >UniRef50_A7JYE5 Na(+) H(+) antiporter subunit D n=3 Tax=Vibrio RepID=A7JYE5_VIBSE Length = 498 Score = 298 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 108/509 (21%), Positives = 222/509 (43%), Gaps = 26/509 (5%) Query: 3 YSVMFALLLLTPLLFSLLCFACRK--RRLSATRTVTVLHSLGITLLLI--LALWVVQTAA 58 S++ L ++ L +L F R+ + + + + +L + LL + +Q A Sbjct: 2 SSILLTLPVVLSLSTALTIFFVRRSTKSVEWLSGASAILNLVVAGLLTENIISNGIQAVA 61 Query: 59 DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 G+ D + I VIG + Y++ + + ++ Y+ Sbjct: 62 FGQWQAPFGIVFVADYFSVAMVMITAVIGAICVFYAMADLHRKPSYSN--------YHAL 113 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAF 178 H+ L + + ++ ++ E ++S L+ + ++ ++ A KY+++ + Sbjct: 114 THVLLAGVYGAFLTGDIFNLYVWFEVMLIASFGLMVLDATKTQIDGAVKYVMLNLISTLV 173 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 L L+Y ++ +++ ++ + ++ ++ L F K LFP+ Sbjct: 174 FLLAIGLLYGATGTLN--------LADLYTKAGESELSINMMLSALFLFAFSIKAALFPL 225 Query: 239 HAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 AWLP ++ PS V AL +A+L + LIR + ++ S + L+ I G L++ Sbjct: 226 FAWLPASYHTLPSGVVALFAALLTKVGVYALIRVFTLVFPLAESGWQPTLIWIAG-LTML 284 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 Q DIK++L++ + +G + + L I PL + A+ +I++H + K LF Sbjct: 285 TGVLGAASQFDIKKILSFHIISQIGYMIMGLAIYTPLALAGAIFYIVHHIIVKANLFLIG 344 Query: 359 GNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH 418 G + KYG+ L + G+ K MP+ A LF A +LAG PP + F +F+ I + L + Sbjct: 345 GFIERKYGSSQLEHLGGVYKAMPWLAFLFLVPAFSLAGFPPLSGFWGKFLVIKSSLQAEY 404 Query: 419 LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRG----DLGWLTTSPMVILLVMMLA 474 + LL+ L + + ++ + KP + + WL P+ +L + L Sbjct: 405 YWLAGTALLVGLLTVYSMTKIWSEAFWKKPVREKTEQTLQVKVHWLYCVPIAVLTMFTLI 464 Query: 475 MGTHIPQPVIRILAGASTIVLSGTHDLPA 503 +G + +P + A+ +L+ + A Sbjct: 465 IGL-VAEPFYQFSVQAAEQLLNPNEYIRA 492 >UniRef50_B0R3U9 NADH dehydrogenase-like complex subunit L n=9 Tax=Halobacteriaceae RepID=B0R3U9_HALS3 Length = 692 Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats. Identities = 130/524 (24%), Positives = 219/524 (41%), Gaps = 58/524 (11%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAAD------- 59 LL L +LL + L + + + +L++ + +V + + Sbjct: 11 IPLLPFASFLVALLAGYFAPKLLPKGGAIPGIVATAGSLVVSVWAFVTVSQGEYIAESIY 70 Query: 60 ----AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 A F+ + +D L + L I+ ++ FL ++S+GYM E G L Y Sbjct: 71 TWVAAPNAFSLHFGVLVDPLAAMMLVIVSLVAFLVHVFSLGYMNDEGEGG------LHRY 124 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTV 174 Y LF F+ML V ++NL++ + E L S L+G + ++ AA K ++ Sbjct: 125 YAGLGLFTFSMLAFVVADNLLMAFMFFELVGLCSYLLIGFHFRQQGPPSAAKKAFLVTRF 184 Query: 175 GVAFGLFGTVLVYANAAS-----------------------VMPQAEMAIFWSEVLKQSS 211 G F L G V V+A + V + M + L Sbjct: 185 GDYFFLIGVVAVFATFGTARFVATGEGAHAFPHMAEQALAAVGGEGTMPAHVAHFLDVVG 244 Query: 212 LLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLI 270 + + + +L G K+ FP+H WLPDA E P+PVSAL+ A ++ + ++ Sbjct: 245 MSAQQWFSVVGLLVLGGVIGKSAQFPLHTWLPDAM-EGPTPVSALIHAATMVAAGVYLVA 303 Query: 271 RYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELG 330 R Y ++ + G + AA +V+ ++K++LAYS++ G + + LG Sbjct: 304 RMYGFY---ALLPTVLAIIALVGGFTALFAATMGVVKDELKQVLAYSTISQYGYMMLGLG 360 Query: 331 IGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGG 389 G G AA H+L H+ K LLF G+G+V++ + ++ + G+ K MP T F Sbjct: 361 TG---GYIAASFHLLTHAFFKALLFLGAGSVIIAMHHNENMWDMGGLRKKMPVTYYTFLS 417 Query: 390 GALALAGMPPFNIFLSEFMTITAGLARNH------LLIIVLLLLLLTLVLAGLVRMAARV 443 G+LALAG+ PF F S+ + L L + LL + RM Sbjct: 418 GSLALAGIVPFAGFWSKDEILYEALIYGAGDSPILLAAYAMGLLAVFFTGFYTFRMVVLT 477 Query: 444 LMAKPPQ--AVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIR 485 +P A + + W P+V+L V+ +G PV Sbjct: 478 FHGEPRSDTAEDPHGVRWNVKFPLVVLGVLAATVGLVNMTPVAE 521 >UniRef50_D2QRI2 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QRI2_9SPHI Length = 635 Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats. Identities = 121/488 (24%), Positives = 207/488 (42%), Gaps = 44/488 (9%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL----WVVQTAADA 60 ++ A +LL P L+ +R + L +++LL + L +QT Sbjct: 11 LLMASILLLPFAGFLVLTMASRRVAQLIAVLLTGAGLLLSVLLAVNLPEQGITLQTNWAI 70 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 + + +D L L L ++ + L +YSI Y+ E L Y + Sbjct: 71 LSGASFPVTFRVDALAALMLLLVHFVALLVQVYSISYLHDEP--------KLRRYSSYLQ 122 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVGVAFG 179 LF+ ML +V + NL+VM+ E L+S L+G Y +R + +AA K ++ VG Sbjct: 123 LFVGAMLGIVLAGNLLVMYGFWELVGLASYLLIGFYAERPAASQAAKKAFLMNRVGDIGF 182 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L G L Y ++ A + + L +G K+ FP+ Sbjct: 183 LIGIFLTYYYFDTLDFTALADKGADGIAP----------TALGLCLFMGCVGKSAQFPLL 232 Query: 240 AWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 WLPDA E P+PVSALL A ++ + +L R + ++ + Sbjct: 233 TWLPDAM-EGPTPVSALLHAATMVAAGIFLLARVHPLLSPDALVVITIIGTITT-----L 286 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 + + Q DIK++LA+S+V +GL+ V +G G + A+ H+L H+ K LF + Sbjct: 287 WGGYSAVFQTDIKKVLAFSTVSQLGLMVVGMGTGN---VAGAMFHLLTHAFFKAGLFLSA 343 Query: 359 GNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN- 417 G ++ ++D+ + G+ K++P T + + A AL+G+P + FLS+ + Sbjct: 344 GAIIHAVHSQDMRQMGGLHKVLPTTFIAYTICAAALSGLPFLSGFLSKEAILGGAFGWAE 403 Query: 418 ------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR----GDLGWLTTSPMVI 467 L I VL+L L + R V + + + GWL P+VI Sbjct: 404 AQASGLALSIPVLVLFSSGLTAFYMARQWRLVFFSAYRSEITPLSAAHEPGWLMRGPVVI 463 Query: 468 LLVMMLAM 475 L + L + Sbjct: 464 LAALSLWL 471 >UniRef50_D2LKE4 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Rhizobiales RepID=D2LKE4_RHOVA Length = 499 Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats. Identities = 123/476 (25%), Positives = 206/476 (43%), Gaps = 28/476 (5%) Query: 4 SVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVV----QTAAD 59 S + L++ + LL L+ F + R+ T+ + +L L+ L LW V Q Sbjct: 5 SWVPPLVIASSLLPGLIIFGLPENRVGLRTTLNMFGALFKLSLVGLMLWGVYNERQFETR 64 Query: 60 AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 + L L L LF+ + V+ F T IY+IGY+ E ++GFF Sbjct: 65 VPFLPGLDLVLSASPLALLFVTLSTVLWFFTTIYAIGYLEGEPHR--------SRFFGFF 116 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFG 179 L + + V S NLI E TL++ L+ G ++ A Y+ G A Sbjct: 117 SLCVTATVGVALSGNLITFVLFYELLTLATYPLLVHRGTEAARHAGKIYLAYTMSGGALL 176 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L GT+ +Y ++ ++ ++ S L T ++ FV L+ G G K L P+H Sbjct: 177 LLGTIWLYTLTGTLDFVSQG------FVQHLSPLHDTTLVTIFVLLIAGLGVKAALVPLH 230 Query: 240 AWLPDAHSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDFPNRL--LLIFGMLS 296 WLP+A AP+PVSALL AV ++ ++ + + L L ++ Sbjct: 231 GWLPEAMV-APAPVSALLHAVAVVKAGAFGIVLVVYEVFGVQFAASLGVLSPLAWLAAVT 289 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + + L Q D+KR LAYS+V + + + + I P+ L+H++N + K LF Sbjct: 290 IIYGSLRALFQDDLKRRLAYSTVSQVAYIILGVAIASPIATIGGLVHLVNQGVMKITLFF 349 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 +G+ G ++ + G+ MP+T F GA + G PP F++++ L Sbjct: 350 CAGSFAQTLGVHKVSEMNGIGGRMPWTMAAFTIGAFGMIGAPPVAGFITKWYLGLGALEA 409 Query: 417 NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP------PQAVNRGDLGWLTTSPMV 466 +I++L+ L A + + R A P Q + R GW P++ Sbjct: 410 QQGWVILVLVGSTLLNAAYFLPILNRAWFAAPSPEWPREQNLTRTKKGWALLLPLI 465 >UniRef50_C7MLM1 Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=3 Tax=Bacteria RepID=C7MLM1_CRYCD Length = 672 Score = 297 bits (762), Expect = 5e-79, Method: Composition-based stats. Identities = 132/521 (25%), Positives = 237/521 (45%), Gaps = 46/521 (8%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 MS + +F ++ + +L + + ++ V + + + A+ Sbjct: 1 MSATTLFLTSVVFSCVGALASILAMRNQQASKVIGCVFGMVSALFGIAAGCQAIVGTAEW 60 Query: 61 GEIFA----AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 + A L ++ L GL + ++ V+ F IY + Y G + Sbjct: 61 SSVVTPFSFANFSLLLNPLSGLLMLVISVLAFAAWIYGLNYFDEYKGQGLGTMG------ 114 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGV 176 F +LF+ +M V+ +N + E +L+S FLV + +S++ + Y+I+ +G Sbjct: 115 FFMNLFIASMGFVICVDNALWFLVFFELMSLTSYFLVIVEQNETSIKGGFLYLIMAHIGF 174 Query: 177 AFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLF 236 + ++ S QA ++S P + L FV IGFG K G+ Sbjct: 175 FLIMIAFFVMAGLTGSFEFQA----------FRTSAFSPVISSLVFVLCFIGFGCKAGMI 224 Query: 237 PMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD-FPNRLLLIFGML 295 P H+WLP AH APS VSAL+S ++ + +++ + + Q+ + + L+L+FG + Sbjct: 225 PFHSWLPQAHPAAPSNVSALMSGGMIKIGVFGMVKVGLDLLQSSPVELWWGILVLLFGAV 284 Query: 296 SVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHI 344 S + + L + DIKRLLAY SVEN+G++ + +GIG LG A H+ Sbjct: 285 SSVLGVVYALAEHDIKRLLAYHSVENIGIILLGVGIGFIGVAVGNPIVAVLGFLAGFYHL 344 Query: 345 LNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 NH++ K LLF G+G+VL GTR++ + G+ ++MP TA+ F G+LA++ +PP N F+ Sbjct: 345 FNHAMFKGLLFLGAGSVLYSTGTRNMEKMGGLARVMPVTAMCFLIGSLAISAIPPLNGFV 404 Query: 405 SEFMTITAGLARNH----------LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV-- 452 SE+ T + V L + L + V+ ++ P V Sbjct: 405 SEWFTYQSMFTAAFAGDAVIRLFAAFAAVSLAITGALAVTCFVKAYGVTFLSAPRSDVAR 464 Query: 453 NRGDLGWLTTSPMVILLVMMLAMGTHIP--QPVIRILAGAS 491 N ++ M ++ + + MG P P+++ +A A+ Sbjct: 465 NAQEVPGPMKFAMGLIAFICVCMGLGAPWVAPIMQHIAEAT 505 >UniRef50_A6DPK7 NADH-ubiquinone/plastoquinone family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPK7_9BACT Length = 766 Score = 297 bits (762), Expect = 5e-79, Method: Composition-based stats. Identities = 133/513 (25%), Positives = 236/513 (46%), Gaps = 28/513 (5%) Query: 2 SYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG 61 S +++F TP L + ++R L A T + + I + + Sbjct: 6 SVALIFLAAFATPALARFIP--NKRRALFAIVPATSFYLIFSKAQEIASGTSLSEDYTWI 63 Query: 62 EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 F L +DGL L ++ IG L IY+ GY++ A+ +Y + Sbjct: 64 PRFGINLNFRLDGLSFLMALLITGIGTLILIYAAGYLKDYKAN--------TRFYTIIQI 115 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVAFGL 180 F+ ML +V S+NLI M+ E TT+SS LVG + + + A + +I+ G L Sbjct: 116 FMAAMLGLVLSDNLISMFIFWELTTVSSFLLVGFNHENPDARKKALQALIVTAGGGLAML 175 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLL-DPTLMLLAFVFLLIGFGTKTGLFPMH 239 G +L+ A + SE+++ S L+ + L + + +G TK+ FP H Sbjct: 176 AGLLLLGNIAGTYQ--------VSELIQHSELIKNHKLYEAVVILVCLGAFTKSAQFPFH 227 Query: 240 AWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 WLP+A + AP+PVSA L SA ++ + +L R ++ G+DF LL+ G ++ Sbjct: 228 FWLPNAMA-APTPVSAYLHSATMVKAGVFLLARLTPVLG---GTDFWMYLLVCVGGFTML 283 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 +AA L+ RD+K++LAYS++ +G++ + +G+G AA++ + H+L K LF + Sbjct: 284 LAATLGLIYRDLKKILAYSTLSVLGIITLLIGMGTEFSFKAAIMMLFAHALYKATLFMVA 343 Query: 359 GNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN- 417 G++ + GTRD+ + G+ K+MP+T AL+ AG PPF FL++ + L N Sbjct: 344 GSIDHEAGTRDITKLRGLRKVMPWTFAAAALAALSQAGFPPFTGFLAKEYFYGSALDHNL 403 Query: 418 HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGT 477 ++I + + ++ + + + + ++ + + L + L G Sbjct: 404 KAVLISSAFISSMFLFVLAFKIGFQPFLGRANKKIHAHEAPPSMLLGPIALGSLSLLFGL 463 Query: 478 HIPQPVIRILAGASTIVLSGTHDLPAQRSTWHD 510 IL+ A + H P + WH Sbjct: 464 FPGPIAKYILSPALASFTTSFH--PVKLKLWHG 494 >UniRef50_A6DPK4 NADH-Ubiquinone/plastoquinone (Complex I), various chains domain protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPK4_9BACT Length = 498 Score = 297 bits (762), Expect = 5e-79, Method: Composition-based stats. Identities = 119/498 (23%), Positives = 222/498 (44%), Gaps = 27/498 (5%) Query: 16 LFSLLCFACRKRRLSATRTVTVLHSL-----GITLLLILALWVVQTAADAGEIFAAGLWL 70 + LC + + L RTV+++ +L LL + +Q + G G+ L Sbjct: 12 FMAALCCSLFTKNLKLQRTVSLIAALFHLAASFNLLQTVRAEGIQVYLNGGWAANIGIAL 71 Query: 71 HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVV 130 D + L I G+I + +YS M+ E + Y+ F+ + + Sbjct: 72 VADLFSSIMLVITGLISLVVLVYSFKEMKEE--------LQARFYFPLFNFLMMGVNGSF 123 Query: 131 TSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANA 190 + ++ ++ E LSS L+ + + LE A KY+ I L G ++YA Sbjct: 124 ITGDMFNLYVWFEVMLLSSFILLAMGKKPDQLEGAIKYVTINLFSSILFLSGAAIIYAKT 183 Query: 191 ASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAP 250 S+ A++AI +E D L+ + L FG K+ LFPM WLP ++ P Sbjct: 184 GSL-NMADIAIRIAES------SDEKLLNSTAILFLSSFGIKSALFPMFLWLPASYHTPP 236 Query: 251 SPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDI 310 +S+L + +L + +IR + +I + + + +L++ V Q ++ Sbjct: 237 VSISSLFAGLLTKVGIYAMIRTFTLIFP-LDNGLLQEFFYVIAILTMVVGVLCAASQFEV 295 Query: 311 KRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDL 370 +++L+ V +G + + L + PLGI A+ ++L++ + KT LF SG +L K G+ DL Sbjct: 296 RKILSVHIVSQIGYMILGLSLFTPLGIAGAIFYLLHNIIVKTNLFLLSGVILRKKGSCDL 355 Query: 371 NVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLT 430 + G+ KI P A +F A ALAG+PP + F ++F+ + A + L++ L + Sbjct: 356 KKIGGLYKINPGFATIFALSAFALAGVPPLSGFWAKFVVLKAAADSHEYLLLGTGLAVGV 415 Query: 431 LVLAGLVRMAARVLMAKPPQA-----VNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIR 485 + L + ++ A K P+ ++ G+ W P++ L +G + + Sbjct: 416 VTLFSMTKIWAEAFWKKQPEEYPGEGIDTGNQPWQIMLPIIFLTCCTFGLGIW-GEFIFE 474 Query: 486 ILAGASTIVLSGTHDLPA 503 I A+ +L+ + A Sbjct: 475 ICVEAAEQLLNPEEYIKA 492 >UniRef50_B3QY39 Proton-translocating NADH-quinone oxidoreductase, chain M n=14 Tax=Bacteroidetes/Chlorobi group RepID=B3QY39_CHLT3 Length = 545 Score = 297 bits (762), Expect = 5e-79, Method: Composition-based stats. Identities = 107/547 (19%), Positives = 212/547 (38%), Gaps = 69/547 (12%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 M +L++ P++ ++ A + R V++ ++ +L ++ + Sbjct: 1 MLSLIVFLPIIAFVIVLAIPGSQKQIIRFVSLAAAIAQGVLSVILWQGYDKTMPGIVAGS 60 Query: 66 AG----------------------------LWLHIDGLGGLFLAILGVIGFLTGIYSIGY 97 G +L +DGL + + +I + + S Sbjct: 61 NGNVSETFQFVERLDWITLNFGRFGTLNIEYFLGVDGLSITMVLLTALISIIGVVSSW-- 118 Query: 98 MRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG 157 + Y+ ++L M+ + + + + E L FL+GI+G Sbjct: 119 ---------TIQKQVKGYFLLYNLLSMAMMGCFVALDFFLFYVFWEIMLLPMYFLIGIWG 169 Query: 158 QRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN----AASVMPQAEMAIFWSEVLKQSSLL 213 + AA K+ + G F L + +Y + A + +A+ S+ Sbjct: 170 GPNREYAAIKFFLYTLFGSVFMLLVLIGLYFSVIDPATGNHTFSMVAMVDQANYIPGSIF 229 Query: 214 DPT---LMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLI 270 P AF+ L +GF K +FP H WLPDAH EAP+P+S +L+ VLL ++ Sbjct: 230 GPESTFWRYAAFIALFVGFAIKVPMFPFHTWLPDAHVEAPTPISVILAGVLLKLGTYGML 289 Query: 271 RYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELG 330 R + +D ++ +FG +++ A L Q D+K+++AYSS+ +MG V + + Sbjct: 290 RINFPFFPEVFTDLA-YVIGVFGAINIIYGALCALAQLDLKKMVAYSSISHMGYVLLGMA 348 Query: 331 IGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGG 390 G+ AL + NH +LF G + + +R + G+ MP + + Sbjct: 349 AINTEGMSGALFQMFNHGTITAMLFLLVGVIYDRAHSRQIEKFGGLSSYMPVYSGILTMA 408 Query: 391 ALALAGMPPFNIFLSEFMTITAGLARN-HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP 449 A G+P + F+SE + I ++ +L + A L+ R+ + K Sbjct: 409 FFASLGLPGLSGFISEAFIFVGSFSSEVTRPIAMVSVLGIVFGAAYLLWSLQRMFLGKRR 468 Query: 450 QAV--------------------NRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAG 489 + D+ S ++ L +++L +G + P PV+ ++ Sbjct: 469 PDALYELHEDENGHQEIHFHDWTGKNDVDARELSMLIPLGIIVLFLGIY-PMPVLGLMTE 527 Query: 490 ASTIVLS 496 + ++ Sbjct: 528 SINKLVD 534 >UniRef50_B5YKQ9 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKQ9_THEYD Length = 686 Score = 297 bits (762), Expect = 6e-79, Method: Composition-based stats. Identities = 120/524 (22%), Positives = 227/524 (43%), Gaps = 45/524 (8%) Query: 17 FSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL-----WVVQTAADAGEIFAAGLWLH 71 L F K + ++ S L + ++ Q + + + Sbjct: 15 MVLTSFIKNKNFSGFITLIMMIFSSFCIFYFSLDVIIENKFIEQEIFSLKPLLNSSFTIS 74 Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 ID L LFL I+ ++ F ++S Y+ + + +Y F L + VV+ Sbjct: 75 IDSLSALFLLIISLVSFCVSLFSWKYLDVYKTN------SPKRFYPFLILLFIASIGVVS 128 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVYANA 190 + + E TLSS FLV ++ S+L+ +Y I V AF + +V++Y+ + Sbjct: 129 VKDFLFFIVFWELMTLSSWFLVIFEREKKSALKGGLQYFIATHVTTAFLILASVILYSYS 188 Query: 191 ASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAP 250 + F + Q P L + I F TK G+ P WLP+ + + P Sbjct: 189 NDFSFKEINKSFSLIIKNQ-----PYLSHFILFCIFIAFVTKAGVLPFGFWLPNTYPQPP 243 Query: 251 SPVSALLSAVLLNCALLVLIRYY-IIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRD 309 S S+ V+ A+ L R++ +I + + ++ FG+ S+ V L Q + Sbjct: 244 SSASSFFGGVMSKLAVYALFRFFCSVIPFSFHTQIWGFIIASFGVFSIFVGTIAALTQDE 303 Query: 310 IKRLLAYSSVENMGLVAVELGIG----------GPLGIFAALLHILNHSLAKTLLFCGSG 359 KRL+++ ++ +G + + +G+G + + L H+ N+S+ K+LLF +G Sbjct: 304 AKRLMSFHAIGQVGYMFLGIGVGLYFIRINPFLASIALVGGLFHVFNNSIYKSLLFLNAG 363 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR--- 416 ++ K GT DLN V G++K+MP TA+ G+L++AG+PPFN F+S+ + + + Sbjct: 364 SIFYKTGTTDLNKVSGLMKVMPLTAITALIGSLSIAGVPPFNGFISKLLIFESSIWSAKQ 423 Query: 417 ---------NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVN-RGDLGWLTTSPMV 466 ++ ++ + + + LA ++ M K ++ + +L W + Sbjct: 424 SEVFFLIRGAFIVFGIISVFISAVTLASFLKFVNSAFMGKLQGTIDEKRNLPWSMVLSQI 483 Query: 467 ILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHD 510 IL + L G P ++I+ A V++ + LP S + Sbjct: 484 ILAFICLLAGL-FPFIPLKIIYNA---VIASSGSLPKFSSVFVG 523 >UniRef50_C2BM70 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=5 Tax=Corynebacterium RepID=C2BM70_9CORY Length = 993 Score = 297 bits (762), Expect = 6e-79, Method: Composition-based stats. Identities = 121/533 (22%), Positives = 219/533 (41%), Gaps = 48/533 (9%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE-- 62 V+ L+ ++ LL + A + ++ S G L+ L T + A E Sbjct: 3 VLLGALIAASVVAPLLIMRMGRP---AFGILALVPSAGFVWTLVHFLRGTFTDSGAVERT 59 Query: 63 -----IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 L +DGLG LF I+ +G L +Y GY + L + Sbjct: 60 VEWMPSANLSFSLRLDGLGALFSLIILGMGALVLVYCWGYFDG-------TRRRLAMFAA 112 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGV 176 F M +V ++N ++M+ E T++ S LV Y +R+S AA + +++ +G Sbjct: 113 QMVGFATAMFGLVAADNFLLMYVFWEITSILSYLLVSYYAERASSRRAAQQALMVTALGG 172 Query: 177 AFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLF 236 L G +L+ A +S++ + +A V +L G TK+ + Sbjct: 173 LSMLMGIILLGRQTG--------AWTFSDIAAYQHFAQTPFVTVAIVLILAGALTKSAIA 224 Query: 237 PMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGML 295 P H WLP A + AP+PVSA L SA ++ + ++ R + + + +++ G+ Sbjct: 225 PAHFWLPGAMA-APTPVSAYLHSAAMVKAGIYLVARLAPSMYEVA---TWHVVVISLGVF 280 Query: 296 SVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLF 355 ++ + + L QRD+K +LAY +V +G + +G + AAL HSL K LF Sbjct: 281 TMLLGGWMALKQRDLKLVLAYGTVSQLGFITSIAAVGSREAMQAALALTFAHSLFKAALF 340 Query: 356 CGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLA 415 G + GTRD+ + G+ + PF + L++AG+PP F+++ + A + Sbjct: 341 MVVGAIDHCSGTRDITKLSGLGRKEPFLFGIAIISGLSMAGVPPLFGFVAKEAVLEATMH 400 Query: 416 RNHL------LIIVLLLLLLTLVLAGLVRMAARVL-------MAKPPQAVNR-GDLGWLT 461 L +++V +L L +A +R +P +AV + + Sbjct: 401 EELLAGMPRNMMLVAYVLGSILTMAYTLRFLWGAFATKQEVNGTEPAEAVAKMHPVTMGL 460 Query: 462 TSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPS 514 +L + + +G P+P+ + WH F + Sbjct: 461 WLSPALLTALTVVLGV-FPKPLSAAFDQHLNSTFGPKEHSEL--ALWHGFSVA 510 >UniRef50_Q466B6 F420H2 dehydrogenase subunit L n=5 Tax=Methanosarcinales RepID=Q466B6_METBF Length = 667 Score = 297 bits (761), Expect = 6e-79, Method: Composition-based stats. Identities = 124/502 (24%), Positives = 219/502 (43%), Gaps = 46/502 (9%) Query: 9 LLLLTPLLFSLLCFACRKRRLSATRTVTVLH---SLGITLLLILALWVV---QTAADAGE 62 L+ L P L ++ F ++ S V +L S I+L++ L L + Sbjct: 7 LIPLLPALAFVITFFFGRKMPSGGAIVPILAIAASFVISLMITLRLLANPDEVISQSYPW 66 Query: 63 IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 + + ID L + L+++ + L IY++ YM + Y+ LF Sbjct: 67 FAVLNIGVLIDPLAAVMLSMVSFVSLLIHIYAVSYMSGDPGE--------ARYFAETALF 118 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKY-IIICTVGVAFGLF 181 ML +V S+N++ ++ + E L S L+G + +R S AA K + +G L Sbjct: 119 TAAMLSLVLSDNILQLFVSWELVGLCSYLLIGFWFERPSAAAAAKKAFLTTRIGDVMFLT 178 Query: 182 GTVLVYANA---ASVMPQAEMAIFWSEVLKQSSLLDP----------TLMLLAFVFLLIG 228 G +++ ++ A + + E+ L + + + + G Sbjct: 179 GIIVLTSDILKLAGGFQDGTYLLRFDEIFSYIPQLSALQTNIFGFEVSHLTIITLLFFGG 238 Query: 229 FGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNR 287 K+G FP+H WLPDA E P+ VSAL+ A ++ + ++ R + + A S Sbjct: 239 AVGKSGQFPLHVWLPDAM-EGPTTVSALIHAATMVTAGVYLVARTFPMFIAAPDSLM--- 294 Query: 288 LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFA---ALLHI 344 ++ G + A +V D+KR+LAYS++ +G + + LG+G +G+ A +L H+ Sbjct: 295 VVAYLGGFTALFAGTMGIVMNDLKRVLAYSTISQLGYMMLGLGLGSAIGLEAIGISLFHL 354 Query: 345 LNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALA--GMP---- 398 +NH+ K LLF +G+V+ GT+D+ + G+ K+MP TA ALALA G+P Sbjct: 355 INHAFFKALLFLCAGSVIHAVGTQDMRELGGVRKVMPVTAATMAIAALALAGFGIPGTSI 414 Query: 399 PFNIFLSEFMTITAGL----ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR 454 + F S+ I A N+ + + L + R+ KP + Sbjct: 415 GTSGFFSKDAIIEAAYLFGENSNNWIPYAFSIAAALLTSIYIFRLIFMTFTGKPRSDYHG 474 Query: 455 GDLGWLTTSPMVILLVMMLAMG 476 + + T P+ IL + L G Sbjct: 475 HESPAIMTIPLSILAIFSLVFG 496 >UniRef50_C4LLM4 Na(+)/H(+) antiporter subunit n=3 Tax=Corynebacterium RepID=C4LLM4_CORK4 Length = 999 Score = 297 bits (761), Expect = 7e-79, Method: Composition-based stats. Identities = 111/450 (24%), Positives = 188/450 (41%), Gaps = 27/450 (6%) Query: 68 LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 L D L F + IG IYS Y+ +Y F+ ++ Sbjct: 75 FSLRADALSTFFALLALGIGAAVFIYSTRYLHGGRG--------SMSFYLLMTAFMAAVV 126 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVY 187 +V ++++I+M+ + E +L+S FL+ G L + + II+ G L + Sbjct: 127 TLVLADDVILMFISWELVSLASFFLIARSGPGGEL-GSMRTIILTFFGGLTLLTSLGISA 185 Query: 188 ANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHS 247 + + PTL+ + V + TK+ FP H WLP+A + Sbjct: 186 GVTGTTSLSGI-------IHSPEWAHHPTLLSVIAVLIATSACTKSAQFPFHFWLPEAMA 238 Query: 248 EAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILV 306 A +PVSA L A ++ + +L+R+ + + LL+I GM + +AA F L Sbjct: 239 -ADTPVSAFLHAAAVVKAGIYLLLRFSALFHDDA---WWRGLLIIVGMFTAIMAALFALQ 294 Query: 307 QRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG 366 + D+K+L AYS+V +G + +GIG PL + AA++H L H+L K+ LF G V + G Sbjct: 295 KNDLKKLTAYSTVSQLGWIVCTIGIGTPLAMAAAVVHTLAHALFKSSLFMLIGVVDHQTG 354 Query: 367 TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLL 426 TRD+ + + + MP+T + A ++A +PP F+S+ + A LL Sbjct: 355 TRDIRRLGPIWRKMPWTFSMAVIAATSMAAVPPLFGFISKEGMLDAMAEGELATPATALL 414 Query: 427 L-----LLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQ 481 L L A R + + + P I + L +G +P Sbjct: 415 LICATVGAILTFAYSYRYVFGGFVDGTRDVSDVHEAPLSLWLPAAIPGFLSLPLG-FVPG 473 Query: 482 PVIRILAGASTIVLSGTHDLPAQRSTWHDF 511 + + A+ LS H + +H Sbjct: 474 FMNSFVDAAADSALSTHHATHTHLALFHGI 503 >UniRef50_Q47T29 NADH dehydrogenase (Quinone) n=4 Tax=Actinomycetales RepID=Q47T29_THEFY Length = 982 Score = 297 bits (761), Expect = 7e-79, Method: Composition-based stats. Identities = 120/518 (23%), Positives = 204/518 (39%), Gaps = 35/518 (6%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA----- 60 M LL+ +L RK A + ++ + L A V+ + Sbjct: 1 MIWLLVAHFTAAALAPALVRKWGRQAFFALALVPASAAIWALPRAPGVIAGEPELFFLPW 60 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 + L +D L + L + IG L +Y Y + L + G Sbjct: 61 APNYQLALAFRMDALSLVMLLLAAGIGALILLYCARYFSDDE-------PGLGRFAGVLT 113 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYIIICTVGVAFG 179 F M+ +V +N+LI ++ E TT+ S L+G Y +R + AA I + T+G Sbjct: 114 GFAGAMIGLVLANDLIQLYLYWELTTVFSYLLIGHYPERRDNRRAAAMAINVTTMGGLTM 173 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L G V++ +A + + +A T + +A V +L+G +K+ +FP Sbjct: 174 LVGLVILGESAGTYLISGILA----------EPPSGTAVTVALVLILVGALSKSAIFPFS 223 Query: 240 AWLPDAHSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 WLP A +AP+PVSA L A ++ + ++ R +I G ++ Sbjct: 224 LWLPAAM-QAPTPVSAYLHAAAMVKAGVYLIARLTPAFGDIPA---WQYTAVILGTATMI 279 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 + + L Q D+K LLA+ +V +G + GIG A L + H+L K LF Sbjct: 280 GSGWRALRQHDLKLLLAHGTVSQLGFLTAIFGIGTRDAALAGLAMLCAHALFKAPLFLVV 339 Query: 359 GNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH 418 G + GTRDL + G+ K MP +++AG+PP F ++ A + Sbjct: 340 GIIDHSTGTRDLRELSGLRKKMPVVFWTSVVALMSMAGLPPMAGFAAKEAAFGAFEHADT 399 Query: 419 LLIIVLL---LLLLTLVLAGLVRMAARVLMAKPPQAVNR--GDLGWLTTSPMVILLVMML 473 LL + L ++ + +R K + G L +P ++L + L Sbjct: 400 LLATLALAGVVVGTLFTVGYSLRFLWGAFFDKENTSPTPLLHPPGPLFVAPAIVLAALSL 459 Query: 474 AMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDF 511 G + + + + G PA + WH F Sbjct: 460 LGG--FGASLADPVFASYADTVPGAGHDPAHLALWHGF 495 >UniRef50_B6YTW6 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTW6_THEON Length = 690 Score = 297 bits (761), Expect = 8e-79, Method: Composition-based stats. Identities = 122/510 (23%), Positives = 222/510 (43%), Gaps = 38/510 (7%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF 64 + +L + +L K +S +T L S+ + +++ + + + Sbjct: 6 TLAVILYFLSIPAALALKRSFKASISIGHILTALASIALLAFTFVSIPDILSGKAIEFTY 65 Query: 65 AAG---LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 G + IDGL + I G +G IYS YM G Y + + Sbjct: 66 DLGVAQIPFQIDGLSLIMCFIFGALGLAASIYSPRYMAIYEKSGRG-----WMYITIYSV 120 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVGVAFGL 180 F+ +M+L+VT N+ E T +S L + + A WKY + + Sbjct: 121 FMLSMILIVTIANMFWFIFLWEVMTFTSYLLTIWESDKEDVRKAGWKYFVTMHIVST--- 177 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 + + E L SL L + + LIGFG+K+G+ P+H Sbjct: 178 -------LPLIIALALLYADVSSIEGLNFESLAALKLSPVFYALFLIGFGSKSGVVPLHF 230 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 W P+A++ APS VSAL++ L A+ LIR I + ++ + + G +++ V Sbjct: 231 WAPEAYTVAPSNVSALMAGALEKVAVYALIRTTCFIMKP--NETFGYAVALLGTVTLTVG 288 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIG-------------GPLGIFAALLHILNH 347 + L Q D KRLLAY S+ +G + + +G+G G + + ++L H++NH Sbjct: 289 TLYALKQTDAKRLLAYHSIGQIGYIWLGMGVGIVFIARGDMYSAFGAIALASSLYHLVNH 348 Query: 348 SLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 + K LLF +G++ + +RDLN + G+ K+MPFTA+ A+++AG PPFN F+S++ Sbjct: 349 TFFKGLLFLSTGSIFYRTRSRDLNQLRGLAKLMPFTALFTFIAAMSIAGTPPFNGFMSKW 408 Query: 408 MTITAGLARNHLLII---VLLLLLLTLVLAGLVRMAARVLMAKPPQ-AVNRGDLGWLTTS 463 M + + LI+ V+ L + LA ++ +P + + ++ Sbjct: 409 MIYQSTFLSGNGLIVFFGVMALFISAATLASFIKFYTTAFGGEPTEFTKDAEEVPSPMLI 468 Query: 464 PMVILLVMMLAMGTHIPQPVIRILAGASTI 493 L + + +G + +L+ + + Sbjct: 469 AKGFLASLCILLGLVPSLILPILLSPGAAL 498 >UniRef50_C0GRM0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GRM0_9DELT Length = 699 Score = 297 bits (761), Expect = 8e-79, Method: Composition-based stats. Identities = 112/519 (21%), Positives = 224/519 (43%), Gaps = 59/519 (11%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 + L L+ P + L+ + S V S + + L L+ + +A+A + + Sbjct: 5 LAWLCLIFPFIGVLVTPFLARISTSVMNFGAVFFSF-LAAVCALMLFPLLFSAEALPLES 63 Query: 66 AGLWLH----------IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 +WLH +D L + ++ VI F +Y +GYM+ + + + Sbjct: 64 QLVWLHTPITVSFGVLVDPLSIIVANVVAVISFFIMVYCVGYMKGDPG--------IMRF 115 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE------------ 163 + + F+ +MLL+V +NNLI+++ + L S L+G Y + Sbjct: 116 WMLMNAFIGSMLLLVLANNLIIIFIGWKLVGLCSYGLIGFYYRDEKKYWIGGPEPYSFDT 175 Query: 164 ---AAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLL 220 K I+ +VG L G +++Y A + + + ++ P +++L Sbjct: 176 PSACGVKAFIVTSVGDMLMLGGILIMYFYAGTFNVLELYQTAPEWIPEMAA--TPGMIIL 233 Query: 221 AFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQA 279 + L+ G K+ FP+H WLP+A S P PVSAL+ A ++ + ++ R+ I Sbjct: 234 VSILLIAGPVGKSAQFPLHEWLPEAMS-GPGPVSALIHAATMVKSGVFLIARFIPIFYYG 292 Query: 280 IGSD------FPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGG 333 + + ++ G ++ +AA LV ++K++LAYS+V +G + + LG+ G Sbjct: 293 YWTAGVDEAMYFFLIVAWIGAITAFLAASQGLVALELKKILAYSTVSQIGYMMLALGVAG 352 Query: 334 ------PLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLF 387 G A H+++H++ K LF +G V+ + +N + + K +P+T + Sbjct: 353 FSQDLLVKGYAAGTFHLMSHAMFKACLFLCAGTVIHAAHSIYINDMGALRKFLPYTWLFM 412 Query: 388 GGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK 447 G L+L G+PP F S+ + A L H+++ +++L+ + R + K Sbjct: 413 GLATLSLIGVPPLPGFWSKEAVLLATLESQHIVLFLIVLVSVIFTAFYSTRYFGMMFHGK 472 Query: 448 PPQAVNR---------GDLGWLTTSPMVILLVMMLAMGT 477 + + + + + T +L ++ G Sbjct: 473 QSRHIKQELKKPHNHVHEGYFPQTFACGVLAAGIVIFGL 511 >UniRef50_C0QBF6 HyfF n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBF6_DESAH Length = 496 Score = 297 bits (760), Expect = 9e-79, Method: Composition-based stats. Identities = 174/504 (34%), Positives = 269/504 (53%), Gaps = 25/504 (4%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF 64 +M L+LL P L+CF R R L L + +L W A + Sbjct: 1 MMIWLILLVPAAAGLICFLSRSRSLCRY-----LLCVAAVFHSLLVGWQWFNHGSALQ-- 53 Query: 65 AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGEL--------SPVTLCDYY 116 W+ +D G LFL+I ++ + +Y+ GY++ E + Sbjct: 54 --SAWIGLDDAGLLFLSITSLLFLGSSVYTFGYLKAEAQGHRRDMEENILFKNSNDAVFT 111 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGV 176 G FL TM LV S +L +MW AIEATTLSSA L+ + SLEA WKY++IC++G+ Sbjct: 112 GCLLFFLSTMSLVTVSRHLGLMWVAIEATTLSSAPLIYYHRHHRSLEAVWKYLLICSIGI 171 Query: 177 AFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLF 236 A + G + A S + + ++ ++ L+PT + AFV L+G+GTK GL Sbjct: 172 ALAMLGNFFI-VVAGSNINATGSLLSLDTLMANATRLNPTWLKAAFVLCLVGYGTKMGLA 230 Query: 237 PMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 PMH WLPDAHSEAPS VSALLS LLNCA LVL+R ++++ A RL +I G++S Sbjct: 231 PMHNWLPDAHSEAPSSVSALLSGALLNCAFLVLLRIHVVMTAAGLGQTSGRLFMILGLIS 290 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + +AA FI+ Q+D KR+LAYSSVE+M + G +GI ++ H +NHSL K +LF Sbjct: 291 LVIAAIFIIGQKDFKRMLAYSSVEHM-GIIALGIGVGGIGISGSIFHAVNHSLIKGMLFM 349 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 +GN++ Y T+D+ V G++ P TA+L+ G +A+ G PPF IFLSE + A + + Sbjct: 350 TAGNLMTSYQTKDIAGVSGLIYTRPVTAILWLAGTVAIIGSPPFGIFLSELTILGAMVDK 409 Query: 417 NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDL------GWLTTSPMVILLV 470 + + LL L ++ A L ++ ++PP + + + +P+ + + Sbjct: 410 ARYGVAAVYLLTLGIIFAALSAKVLPMVFSQPPGQTDPKNTSPTDPEPAWSIAPLAVFGI 469 Query: 471 MMLAMGTHIPQPVIRILAGASTIV 494 + L +G ++P + ++L G + V Sbjct: 470 LSLILGIYMPPWLAKVLDGITLYV 493 >UniRef50_D1C6X8 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6X8_SPHTD Length = 527 Score = 297 bits (760), Expect = 9e-79, Method: Composition-based stats. Identities = 119/535 (22%), Positives = 214/535 (40%), Gaps = 58/535 (10%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M + + L PL+ + + F K A R V + SL L ++ L T+A Sbjct: 1 MDGFPILSALTYVPLVGAAIIFFWPKASPQAARWVALGASLVSLALSLVMLAGFDTSASG 60 Query: 61 GEI---------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 + +DG+ L + + ++ + + S ++H Sbjct: 61 MQFVERFEWLPALGVSYHFGVDGISVLLIVLSTLLTTIGIVASWSSIQH----------R 110 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIII 171 + +Y + ML V S +L + + E + A L+G++G + + AA K+ + Sbjct: 111 VREYMITMLMLETGMLGVFVSLDLFLFYIFWEVMLIPMALLIGVWGSANRVYAAVKFFLY 170 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 G L G + +Y + + + Q T + F I F Sbjct: 171 TLAGSLLMLVGIIALYQSYFEQTGIRTLDVLQL----QQGNYGYTFQMWVFAAFFIAFAI 226 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLI 291 K ++P H WLPDAH EAP+ S LL+ VLL L+R+ + + D+ ++++ Sbjct: 227 KVPMWPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFNLPLFPDAARDWA-PVIIV 285 Query: 292 FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAK 351 ++ + A LVQ D+K+L+AYSSV +MG V + + G++ A++ +L+H L Sbjct: 286 LSVIGIIYGALVALVQPDLKKLVAYSSVSHMGFVTLGIFAFNAQGLYGAMIVMLSHGLVT 345 Query: 352 TLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 + LF G + + TR ++ G+ MP A G A G+P + F+ EF++I Sbjct: 346 SALFLCVGVIYDRGHTRLISRFGGLATNMPVYASFLGLFTFASLGLPGLSGFVGEFLSIL 405 Query: 412 AGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLM----AKPPQAVNR------------- 454 ++ L+++ ++ M RV +PP A + Sbjct: 406 GAFRAERAAGVIAFLVVIF-SAWYMLWMYQRVAWQRAPGEPPDANDPEAKLAGDEPRPVM 464 Query: 455 ---------------GDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIV 494 D+ W + L V+ + MG + PQ + L A +V Sbjct: 465 GGAEHGGDVVDPRTFRDVTWREAMTLAPLAVLTIWMGVY-PQWFMNFLRTALELV 518 >UniRef50_C8PJ79 ATP-binding protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PJ79_9PROT Length = 657 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 130/512 (25%), Positives = 229/512 (44%), Gaps = 42/512 (8%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF 64 + L + + S+L + K + + + + + V + G F Sbjct: 2 ISVYTLFIVSAVISILLYCAPKTAVKVGFGLGAISCFYAMCHFVANMGVSDSFVLGGT-F 60 Query: 65 AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLF 124 + LG F ++ IGF + +Y + Y + + + F+ F+ Sbjct: 61 LYAPKFALSPLGNFFSFVVVFIGFASSVYGMSYAEEYIGKANIGV-----FACLFNTFIL 115 Query: 125 TMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTV 184 +MLLV++++N+ E TL S+FL+ + + +L+A Y+ I +G G + Sbjct: 116 SMLLVISADNVFCFAVLWELMTLISSFLIIVNDGKGTLKAVMVYLGIAQIGAFCITCGLL 175 Query: 185 LVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 ++ A S + + + AF+ L+GFG+K G++P H WLP Sbjct: 176 IIANYAGSFEFAEWGKVN----------MPMGASVAAFILFLVGFGSKAGMWPFHVWLPQ 225 Query: 245 AHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFI 304 AH APS VSAL+S V++ AL L+++ + + +I + +LI G S + Sbjct: 226 AHPAAPSNVSALMSGVMIKVALFTLVKFTLFLPLSI---YFGLAVLILGAASSLFGVLYA 282 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKTL 353 L Q D K LLAY SVEN+G++ + LG G +G A H++NH++ K L Sbjct: 283 LCQHDFKALLAYHSVENIGIILLGLGTGIYGVAAGNVTLAAVGFLAGCYHVVNHAIFKGL 342 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 LF +G+V+ T++++V+ G+ K MP TAV G + +A +PP N F+SE+ T Sbjct: 343 LFLCAGSVIHATHTQNMDVLGGLAKKMPLTAVGMFIGIMGIAALPPVNGFVSEWFTYQGM 402 Query: 414 LARN--------HLLIIVLLLLLLTLVLAGL-VRMAARVLMAKPPQA---VNRGDLGWLT 461 L + + ++ L LT VL G+ +++ A + P N + Sbjct: 403 LQGAKESGIFIRYAFSLAVVALALTGVLVGMHLKLYAVIFAGTPRDEKIWENAKESPLGM 462 Query: 462 TSPMVILLVMMLAMGTHIPQPVIRILAGASTI 493 M+IL++ + G V I+ ++I Sbjct: 463 VLGMIILMIGCVGFGVGAHFIVDYIMQAVNSI 494 >UniRef50_Q0C1D3 NADH-quinone oxidoreductase, L subunit n=4 Tax=cellular organisms RepID=Q0C1D3_HYPNA Length = 716 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 101/480 (21%), Positives = 183/480 (38%), Gaps = 68/480 (14%) Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 F A + +D L + +A++ + L +YS GYM E ++ + LF Sbjct: 101 FKANWAIRVDALSIVMMAVITGVSGLVHLYSWGYMSEEPHK--------SRFFAYLSLFT 152 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVAFGLFG 182 F ML++V ++N I ++ E L+S L+G + + + +A+ K + VG G Sbjct: 153 FMMLMLVVADNFIQLFFGWEGVGLASYLLIGFWYTKKAPNDASIKAFVTNRVGDFGLALG 212 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPT----------------LMLLAFVFLL 226 + V+ SV + + + + L + L Sbjct: 213 IMAVFFVFGSVEFGPVLDAIRTNAIVTPVAFAEAAPAREAVIMFLGQRVYALELIGILLF 272 Query: 227 IGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFP 285 IG K+ F +H WLPDA E P+PVSAL+ A ++ + ++ I + Sbjct: 273 IGAMGKSAQFFLHVWLPDAM-EGPTPVSALIHAATMVTAGVYLVCLVSPIYEYTF---YA 328 Query: 286 NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 ++ + G ++ AA + Q DIKR++AYS+ +G + G+G AA+ H+ Sbjct: 329 AGMIALVGAVTALYAATVGMAQNDIKRVIAYSTCSQLGYMFFAAGVG---AYEAAMFHLF 385 Query: 346 NHSLAKTLLFCGSGNVLL-KYGTRDLNVVCGMLKIMPFTAVLFGGGALALA--GMP---- 398 H+ K LLF G+G+V+ + +D+ + G+ K MP T G +A+ G+P Sbjct: 386 THAFFKALLFLGAGSVIHGMHHEQDMRRMGGLAKFMPLTYAAMMIGTIAIIGLGIPHTKL 445 Query: 399 PFNIFLSEFMTITAGLARNHL------LIIVLLLLLLTLVLAGLVRMAARVLMAKP---- 448 F+ F S+ + + A + LL L R+ Sbjct: 446 GFSGFFSKDAILESAFAGGTAQVMFGQMAFWFGLLAAFLTSFYSWRLIYMTFHGPRVVLE 505 Query: 449 ------------------PQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGA 490 + + P+ +L + + G + + A Sbjct: 506 DHGHDHAHADEHAEDDHHGHDHTPHESPMVMLIPLALLSLGAVFAGFYFYDAFVEANNEA 565 >UniRef50_A5G8U2 NADH dehydrogenase (Quinone) n=13 Tax=Desulfuromonadales RepID=A5G8U2_GEOUR Length = 669 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 136/445 (30%), Positives = 210/445 (47%), Gaps = 42/445 (9%) Query: 69 WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLL 128 + +D L +FL I+ +I IY+ GY A + + L ++G L L Sbjct: 82 EIGLDHLSAVFLLIIFLISICCSIYATGYWP--AASNQRTSRKLTFFFGLLTAALV---L 136 Query: 129 VVTSNNLIVMWAAIEATTLSSAF-LVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVY 187 +V + + I+ A E LS+ F L + EA Y++ G L+ Sbjct: 137 LVIARDSILFLMAWEVMALSAYFVLTTEDHKPEVREAGIIYMVATHTGTLALFAMFSLLK 196 Query: 188 ANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHS 247 AAS A AI + P L F L GFG K GL P+H WLP AH+ Sbjct: 197 GAAASHQFSAMTAINPA----------PPLAAAIFCTALFGFGLKAGLMPLHIWLPSAHA 246 Query: 248 EAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQ 307 APS +SA++S V++ + +IR Q + LL+ G++S + F L Q Sbjct: 247 TAPSHISAIMSGVMIKTGIYGIIRVLSFFPQPPI--WWGITLLVAGIVSAVLGVAFALGQ 304 Query: 308 RDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKTLLFC 356 D+KRLLAY S+EN+G++ + +G+ LG+ ALLH LNH+L K+LLF Sbjct: 305 HDLKRLLAYHSIENIGIIFMGIGVAVIGQATGQPLLTVLGMAGALLHTLNHALFKSLLFL 364 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 G+G V+ TR+++ + G+ K MP+TA+LF GA+A+ G+PP N F+SE++ Sbjct: 365 GAGAVIHATHTREIDRMGGLAKAMPWTAILFLLGAVAICGLPPLNGFVSEYLIYLGFFGG 424 Query: 417 ----------NHLLIIVLLLLLLTLVLAGLVRMAARVLMA--KPPQAVNRGDLGWLTTSP 464 L L L+ L +A V++ V + + + D GW +P Sbjct: 425 VNTVSGPAVPAMALAAPSLALVGALAVACFVKVFGIVFLGARRSREIEPLQDAGWPMRAP 484 Query: 465 MVILLVMMLAMGTHIPQPVIRILAG 489 M++L + + +G PQ V R+L Sbjct: 485 MILLGALCVIIGL-FPQLVARLLQP 508 >UniRef50_C0A4J1 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A4J1_9BACT Length = 672 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 105/413 (25%), Positives = 193/413 (46%), Gaps = 29/413 (7%) Query: 76 GGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNL 135 L ++ +GFL ++S GYM+ + +G+ ++ + LF ML ++ SN+L Sbjct: 86 TAFMLVMVTFVGFLIFLFSTGYMKDDPRYGK--------FFCYLSLFAAAMLGLLISNSL 137 Query: 136 IVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVAFGLFGTVLVYANAASVM 194 ++++ E L+S L+G + ++ S AA K I+ +G L G + +++ +++ Sbjct: 138 LLLFVCWELVGLASYLLIGFWFEKPSAAAAAKKAFIVTRIGDLGFLLGILWLHSATDTLL 197 Query: 195 PQAEMAIF-----WSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 A F + + + + + G K+G FP+H WLPDA E Sbjct: 198 FYDNGAGFLETTQLGSLAALALPGGLAVSTAIGLLIFCGAVGKSGQFPLHVWLPDAM-EG 256 Query: 250 PSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQR 308 P+PVSAL+ A ++ + ++ R ++ + ++ G ++ A Q Sbjct: 257 PTPVSALIHAATMVAAGVFLMARIQPLLTPDALA-----VIATIGAITALFGAILATAQN 311 Query: 309 DIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLL-KYGT 367 DIKR+LAYS+V +G + + +G+G AA+ H+L H+ K LLF G+G+V+ + Sbjct: 312 DIKRVLAYSTVSQLGYMMLAIGVG---AWPAAIFHLLTHAFFKALLFLGAGSVIHAAHHE 368 Query: 368 RDLNVVCGMLKIMPFTAVLFGGGALALAGMPP-FNIFLSEFMTITAGLARN-HLLIIVLL 425 +D+ + G+ M T F G +ALAG+P F+ F ++ + A L + Sbjct: 369 QDIRKLGGLAPRMKLTFATFAIGMMALAGVPFVFSGFWAKEAILHGAHAWPVSQLPFLTA 428 Query: 426 LLLLTLVLAGLVRMAARVLMAKP--PQAVNRGDLGWLTTSPMVILLVMMLAMG 476 L + L + R + K P+ R T P+V+L + +A+G Sbjct: 429 LATVILTAFYMTAPRRRGVYGKTPHPRRRTRARNPLSMTLPLVLLAICAIALG 481 >UniRef50_Q2RUH4 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteobacteria RepID=Q2RUH4_RHORT Length = 1265 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 124/454 (27%), Positives = 210/454 (46%), Gaps = 26/454 (5%) Query: 75 LGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNN 134 LGGLF I IG +YS+GYM+H + Y+ F L + +++ V T+N+ Sbjct: 278 LGGLFALIFAAIGLAVTVYSVGYMKHGHG--------VNRYFFFLFLMIGSLIGVATTNH 329 Query: 135 LIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVM 194 L + E T S LV +L+A KY +IC G FG ++++A + Sbjct: 330 LGNFYLFWELMTWMSYLLVIHEQTAKALKAGMKYFLICASGAYVMHFGILVLHAQLGTFE 389 Query: 195 PQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVS 254 SE+ L P L + LIGF K GLFP+++WLP+AH APS +S Sbjct: 390 I--------SEIAPCIGTLSPALAGVVLATFLIGFMAKAGLFPLYSWLPEAHPVAPSSIS 441 Query: 255 ALLSAVLLNCALLVLIRYYIIICQA---------IGSDFPNRLLLIFGMLSVAVAAFFIL 305 +S +L +L +++ I G P +L+ G +++ + Sbjct: 442 GPMSGILTKAGILGMVKLLFGIFGVGALGQFGLFAGLSLPGAVLVALGGITLLLGEVQAY 501 Query: 306 VQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY 365 Q DIKRLLAYS++ +G + + LG+G L + L H+ NH++ KT+LF G ++L+ Sbjct: 502 RQTDIKRLLAYSTLAQIGEITMVLGVGTSLALAGGLFHVTNHAVMKTMLFFAVGALILRS 561 Query: 366 GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLL 425 R L+ + G+ K+MPFT + G G LA+ G+PPF F+S+F+ I A + + + ++ Sbjct: 562 AGRSLDDLKGLGKVMPFTGLCLGIGLLAIMGVPPFGGFVSKFLMIYACVEAGQVGVAAVI 621 Query: 426 LLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIR 485 L+ + R+ V +P + + L +++ G + + Sbjct: 622 LVGSVIGALYYARVLRAVFF-EPYTGPKVVEAPLTMRIALGALAGVVVFTGVYPDAALSV 680 Query: 486 ILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASV 519 ++ T+ G L A ++ + +V Sbjct: 681 VMPVVETLSARGGLPLAALPPLRMEWSLAALIAV 714 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 115/508 (22%), Positives = 215/508 (42%), Gaps = 58/508 (11%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAA 66 ++L L ++ +++ + KR +++V + L LA ++Q+ Sbjct: 706 WSLAALIAVVGAVVVYILGKRSTVVAGSLSV-----AVMALALAGILIQSG--------- 751 Query: 67 GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTM 126 D L F A++ V+G + +YSIGYM H A ++ FF + + + Sbjct: 752 ----RYDLLSFWFAALIVVVGAINLLYSIGYMAHGHAQN--------RFFFFFVMMIGGL 799 Query: 127 LLVVTSNNLIVMWAAIEATT-LSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVL 185 L V S++L +A E + + ++ + SL+ KY I VG +F G + Sbjct: 800 LGVTASDDLFNFFAFWEVMSSWTLYLVIIHEETKDSLDEGTKYFIFNFVGASFLFLGVAI 859 Query: 186 VYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM------H 239 + A A + + + + + + + ++ +L G K P+ H Sbjct: 860 LAAKAGTFE--------MALLPQAALSMPVGWLAVSAGLILAGLLMKAAQLPLRIDYQMH 911 Query: 240 AWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIG----------SDFPNRLL 289 + AP+PVS +SAVLL +++ + + G P ++ Sbjct: 912 P------APAPTPVSGYISAVLLKVGPYGVLKIMVALGAGGGLARIAGLGAWMPDPLVVV 965 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 + L+V A +VQ +KRLL YS+V +G V + L +G LG+ L+H +NH + Sbjct: 966 QVIAALTVLYAGAMAVVQNGVKRLLIYSTVSQLGYVLLGLSLGSALGVAGGLMHFVNHMM 1025 Query: 350 AKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 K +LF +G +L + L+ + G+ + MP T LF L+L+G+PPFN F S+++ Sbjct: 1026 LKDILFLAAGCILAQAHVHSLDDLGGLGRKMPITFGLFLFAGLSLSGIPPFNGFASKWLI 1085 Query: 410 ITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK-PPQAVNRGDLGWLTTSPMVIL 468 H L+ + L+ LA +++ + P A + + PM +L Sbjct: 1086 YQGAFQGGHYLLAMAALMSSLFTLAAVLKFTHSAFLGPLSPAAATMREAPPVMLIPMGLL 1145 Query: 469 LVMMLAMGTHIPQPVIRILAGASTIVLS 496 + +G ++ I + + L Sbjct: 1146 AAGSVIVGVFPGVALVPISRIQAALGLP 1173 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 45/224 (20%), Positives = 99/224 (44%), Gaps = 3/224 (1%) Query: 288 LLLIFGMLSVAVAAFFILVQ-RDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 L G + + L RD+ R+L YS++ +G V + LGIG G A++H+ Sbjct: 6 ALAWAGAALMLIGEGLALRNVRDLARMLTYSTIAEIGYVLMGLGIGTAAGETGAVMHLGY 65 Query: 347 HSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 ++ + L+ + +++ + G+ L+ + G ++ MPF +++FG G ++ G+ PF S+ Sbjct: 66 QAIMRALVVVAAWHLIRRSGSSKLDALVGSVERMPFVSLMFGFGLFSVMGLSPFKGSFSK 125 Query: 407 FMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPM- 465 F+ + A + + + + + + + +V + + P+ Sbjct: 126 FVILYAAIENGYWGLAAVGTVASIIAAFYYIHTIQQVCFQRQSHGILGDKPIPFFQIPVG 185 Query: 466 -VILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTW 508 + ++V+ L P ++ A+ + L H LP + W Sbjct: 186 QLPIVVLALVTVVMSLDPDPFLMLAANAVGLPDHHGLPEFETIW 229 >UniRef50_Q1PZK0 Similar to membrane-bound [NiFe]-hydrogenase-3, subunit C n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZK0_9BACT Length = 678 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 132/523 (25%), Positives = 235/523 (44%), Gaps = 41/523 (7%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF 64 +F + ++ + +L K + + ++ ++L++ V+ F Sbjct: 4 HLFVISIILYAIGALFALCFFKWQAVGNYISLICAAIASCFSIVLSISVLTNGLIIHFDF 63 Query: 65 AAG-----LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 +D L F+ ++ VIGF+ IYS+GY + V + + + Sbjct: 64 LIYHAIIRYNFLLDPLSSFFMLVISVIGFVASIYSMGYTKLYVNKRDTRFLGFA-----Y 118 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVAF 178 +L L +MLLVVT+NN +V E TL S FLV + ++ +A + Y+++ +G Sbjct: 119 NLLLVSMLLVVTANNALVFMIVWELMTLVSFFLVIFEHENPTNRKAGYVYLVMSHIGAGL 178 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 +++A A + + + + P + F ++IGFG K G+FP+ Sbjct: 179 IAVAFFIMFAYAG-----EAFTFSFDDFRHIGAHMPPIYKNIVFFLIIIGFGIKAGIFPL 233 Query: 239 HAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 H WLP AH APS VS ++S V++ A+ IR+Y + ++L+ G S Sbjct: 234 HLWLPMAHPAAPSNVSMVMSGVMIKTAIYGFIRFYFEFLTPC-PPWWGFIVLVAGASSAI 292 Query: 299 VAAFFILVQRDIKRLLAYSSVEN-----------MGLVAVELGIGGPLGIFAALLHILNH 347 + + L++RDIK LLAYSSVEN M + L L + A L H++NH Sbjct: 293 LGILYALMERDIKTLLAYSSVENIGIILIGIGLSMIFKSYNLMTLSSLAMMAGLYHLINH 352 Query: 348 SLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 ++ K LLF +GN+ T+++ + G++K + TA LF GAL+++ +PP N F+SE+ Sbjct: 353 AVFKCLLFGCAGNIYYSTHTKNIEELGGLIKRLRVTAPLFLVGALSISAIPPLNGFMSEW 412 Query: 408 MTITAGLARNHLLII----------VLLLLLLTLVLAGLVRMAARVLMAKPPQAV--NRG 455 + + L ++ + ++ L LV V+ +A P Sbjct: 413 LIFQSLLNGFYIPSVFFKVMTVICGAIVALTGALVAMCFVKAFGVSFLALPRSEHTRKAK 472 Query: 456 DLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGT 498 ++ + M IL M + MG P ++ + +T +L Sbjct: 473 EVPLVMLVSMGILASMCVFMGL-FPATIMATINQVNTHLLGTN 514 >UniRef50_D2LH97 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LH97_RHOVA Length = 478 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 171/492 (34%), Positives = 285/492 (57%), Gaps = 15/492 (3%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 + ++ P L ++L R++A V + G+T + L+ + + Sbjct: 1 MNEAVYAVVGIPFLSAILLALIPSYRVTALGNV---LASGLTFVAGLSFLTLPPVTET-- 55 Query: 63 IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 ++ +D L F+ + ++GF T ++S Y+ HE+ G L+P+ + Y+ F Sbjct: 56 ------YVILDDLNKFFIILNTLVGFTTSLFSRSYIGHEIETGHLTPLFVRFYHAMFQGM 109 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFG 182 + M L + +NN+ +MW +E TL + +VGIY ++LEAAWKY I+ VG++ FG Sbjct: 110 MGAMNLALLANNIGLMWVGLEFATLMTVIMVGIYRTPAALEAAWKYFILGIVGISLAFFG 169 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 T+LVY V+ + E A+ WSE++K + LD L+ +AF+FLL+G+GTK GL P+HAWL Sbjct: 170 TILVYLTGQGVLGEGEAAMTWSELIKIAPQLDAPLLNIAFIFLLVGYGTKVGLAPLHAWL 229 Query: 243 PDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAF 302 PDAH+E P+P+SA+LS +LLN AL L+R+ ++I + P +L+ G++S+ AAF Sbjct: 230 PDAHAEGPTPISAVLSGLLLNVALFALLRFKMLIAANPNALAPGPILITMGLVSLIFAAF 289 Query: 303 FILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVL 362 + ++DIKRL AYSS+E+MGL+ G+GGPL FAALLH++ HSL K+ +F G+V Sbjct: 290 MLYQRQDIKRLFAYSSIEHMGLITFAFGLGGPLLNFAALLHMVMHSLTKSAIFFAVGHVT 349 Query: 363 LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLII 422 GT++L+ + G+ P +V G +A++G+PPF F+SEF+ +T+ AR LL + Sbjct: 350 QAKGTQELSAIRGLSVSNPLLSVALAAGVIAISGLPPFGAFMSEFLILTSTFAREPLLAL 409 Query: 423 VLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQP 482 + LL + A L+R+ +L +P + ++P+ + L ++L G +P Sbjct: 410 AVAFGLLVALGALLMRL-QDILFGEPTTPNHPVSAA---SAPIFVHLSLILIAGMFLPPA 465 Query: 483 VIRILAGASTIV 494 V+ A+ ++ Sbjct: 466 VVVWFKRAAEML 477 >UniRef50_A7GWM7 ATP-binding protein n=4 Tax=Epsilonproteobacteria RepID=A7GWM7_CAMC5 Length = 655 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 133/516 (25%), Positives = 238/516 (46%), Gaps = 42/516 (8%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF 64 V +L + + S+L + K + ++ L + + + + G+ F Sbjct: 2 VTVYMLFVVSAVISILLYGAPKAAVKVGFGLSALSCFYAMCHFVANMGMNDSFTLIGD-F 60 Query: 65 AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLF 124 + LG F ++ IGF + +Y + Y V + + F F+ Sbjct: 61 LYAPKFALTPLGNFFSFVVVFIGFASSVYGMSYADEYVKKANVGV-----FACLFSTFIL 115 Query: 125 TMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTV 184 +MLLV++++N+ E TL S+FL+ + +++L+A Y+ I +G G + Sbjct: 116 SMLLVISADNVFCFVVLWELMTLVSSFLILVNDGKNTLKAVMVYLGIAQIGAFCITCGLL 175 Query: 185 LVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 ++ A S A M + ++ F+ L+GFG+K G++P H WLP Sbjct: 176 IIAYYAGSSEFSAFMNVKMPMGASATT----------FILFLVGFGSKAGMWPFHVWLPQ 225 Query: 245 AHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFI 304 AH APS VSAL+S V++ AL L+++ + + ++ + +LI G S + Sbjct: 226 AHPAAPSNVSALMSGVMIKVALFTLVKFTLYLPLSV---YFGLAILILGAASSLFGVLYA 282 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKTL 353 L Q D K LLAY SVEN+G++ + LG G +G A H++NH++ K L Sbjct: 283 LCQHDFKALLAYHSVENIGIILLGLGTGIYGLAAGNMTLAAIGFLAGCYHVVNHAIFKGL 342 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 LF +G+V+ T++++++ G+ K MP+TAV G + +A +PP N F+SE++T Sbjct: 343 LFLCAGSVIHATHTQNMDILGGLAKKMPWTAVGMFIGIMGIAALPPVNGFVSEWLTYQGM 402 Query: 414 LARN--------HLLIIVLLLLLLTLVLAGL-VRMAARVLMAKPPQA---VNRGDLGWLT 461 L + + ++ L LT VL G+ +++ A + P N + Sbjct: 403 LQGAMGDSILVRYAFTLSVVALALTGVLVGMHLKLYAVIFAGTPRDKKIWENAKESPIGM 462 Query: 462 TSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSG 497 MV+L++ + G V I+ ++I +SG Sbjct: 463 VLGMVVLMIGCVGFGVGANVIVDYIMKAVNSITVSG 498 >UniRef50_C0GJ41 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ41_9FIRM Length = 794 Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats. Identities = 128/523 (24%), Positives = 214/523 (40%), Gaps = 44/523 (8%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAAD----A 60 + L++L P +L+ R R + +T +L ++++ + A + Sbjct: 101 ITPLLVVLLPFAGALISGLI-GRSNKDIRDCVATCTAFLTCVLAISMYPMVAAGEVSYAL 159 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 E GL +D G +F + I FL YS YMRHE A YY F Sbjct: 160 PEFMGLGLLFRVDFFGFVFAVMASFIWFLATFYSGEYMRHEHA--------STRYYVFLL 211 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 L L L V + + + ++ EA TL S LV ++ A Y+ + G L Sbjct: 212 LSLGGTLGVFLAGDFLSLFLFFEAMTLFSYVLVVHAQSEEAMAAGRNYLYMGIFGGLCLL 271 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 ++V +A + + T+ +A IGFG K G P+H Sbjct: 272 VAIMMVTMHAGTTAIAPGLESLADM---------GTMGYVAAALFFIGFGIKAGAAPLHI 322 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFP--------NRLLLIF 292 WLP AH AP+P SALLS +++ +IR + ++ + P L+ F Sbjct: 323 WLPQAHPVAPTPASALLSGIMIKTGAYGIIRVFTLLYTPAQGESPLWYTTEQFGYALIWF 382 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAAL------LHILN 346 GM+++ AA LVQR KR+LAYSSV MG + + +G LG A+ HILN Sbjct: 383 GMVTMFTAAVLALVQRHAKRVLAYSSVSQMGYILMGIGAAAYLGFDGAIGFAGWAYHILN 442 Query: 347 HSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 H+ K+ +F G + L+ + D + V G+ + P TA F A+AG+P FN ++S+ Sbjct: 443 HAFFKSAMFLMVGAIYLRTHSLDYSKVGGLWRRFPVTAAAFLVAGAAIAGVPGFNGYVSK 502 Query: 407 FMTITAGLARNH-------LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR-GDLG 458 + A + + + L + + R+ + + ++ Sbjct: 503 TLLHHAIVDAWQAQGVTSLWYAEKIFTITGGLTVCYIARLFYSLFLGPARDGTHKYARET 562 Query: 459 WLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDL 501 +L + +L G + R++ S+ + + L Sbjct: 563 FLERTIFAGFAAFLLYGGLAYSNVIERVILPMSSGFVYNDYYL 605 >UniRef50_B9L177 Nadh-quinone oxidoreductase chain m n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L177_THERP Length = 524 Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats. Identities = 116/538 (21%), Positives = 215/538 (39%), Gaps = 59/538 (10%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M + +L+ +PL+ + + F A R + +L S LL ++ L Sbjct: 1 MDNLPILSLITYSPLVGAAILFLWGGASPRAARWIALLASSVSFLLSVVMLVAFDRDQST 60 Query: 61 GEIFAAGLWL---------HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 + WL +DG+ + + ++ + + S +RH Sbjct: 61 LQFTETFDWLPELGIAYRLGVDGISAPLVGLTTLLTLIAVLASWDPIRH----------R 110 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIII 171 + +YY L ML V S +L + + E + A ++G++G + + AA K+ + Sbjct: 111 VREYYITLLLLATGMLGVFVSLDLFLFYVFWEIVLIPMALIIGVWGSANRVYAAVKFFLY 170 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 G L G V +Y + + F+ + F Sbjct: 171 TLAGSLLMLVGIVAIYQEYFRQTGIRTLDVLQL----AQGQYSEAFQFWTFLAFFLAFAI 226 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLI 291 K ++P H WLPDAH EAP+ S +L+ VLL +R+ + + + +++ Sbjct: 227 KVPMWPFHTWLPDAHVEAPTAGSVILAGVLLKMGGYGFLRFNLPLFPD-ATRMWAPAIVV 285 Query: 292 FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAK 351 ++++ A LVQ+D K+L+AYSSV +MG V + + + G+ A++ +L+H Sbjct: 286 LSVIAILYGALMALVQQDFKKLVAYSSVSHMGFVTLGIFVLNQPGLSGAMVVMLSHGFVT 345 Query: 352 TLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 + LF G + + TRDL G+ + MP A FG LA G+P + F+ EF+ + Sbjct: 346 SALFLIVGVLYERAHTRDLAAFGGLARNMPVFAAFFGLFTLASLGLPGLSGFVGEFLALL 405 Query: 412 AGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV------------------- 452 G + VL +++ L ++R+ RV + + P Sbjct: 406 GGFRA-YRWAGVLGTIVVILAAWYMLRVYQRVALVRAPGEPPDPDDPERRLALAHGLPPI 464 Query: 453 --------------NRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLS 496 DL W ++ L ++ + +G + P P++ +L A +L Sbjct: 465 AGGSDGPHAYPDPRTFPDLTWREAVSLLPLALLTIWIGVY-PLPLLEMLEPALAALLG 521 >UniRef50_C8NL94 NADH dehydrogenase (Quinone) n=18 Tax=Bacteria RepID=C8NL94_COREF Length = 516 Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats. Identities = 118/440 (26%), Positives = 203/440 (46%), Gaps = 23/440 (5%) Query: 21 CFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA------AGLWLHIDG 74 F + R+ T+ L + G+ +LL++ L+ V AD F+ + L L +D Sbjct: 28 IFPLPEERVRLRSTIN-LSAAGLKVLLVMLLFPVVLDADLRPEFSMPFLPGSDLVLRVDP 86 Query: 75 LGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNN 134 L F + V+ LT +Y+IGY+ ++GFF L + + + S N Sbjct: 87 LALFFATLSAVLWLLTTVYAIGYLGEGQNR--------SRFFGFFSLCVTATVGISFSGN 138 Query: 135 LIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVM 194 LI E TL + LV +G R+SL+AA Y+ G L G V + A V Sbjct: 139 LITFLVFYEMLTLVTYPLVAHWGDRASLKAARVYLRYTLSGGLALLIGVVWLTIYAGPVD 198 Query: 195 PQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVS 254 A+ +EV S P + ++ F L+ G G K L P+H WLP+A AP+PVS Sbjct: 199 FAPGGAVGVTEVATHS----PGIAIVIFALLVGGLGVKAALVPLHGWLPNAMV-APAPVS 253 Query: 255 ALLSAV-LLNCALLVLIRYYIIICQAIGSDFPNRL--LLIFGMLSVAVAAFFILVQRDIK 311 ALL AV ++ + ++R + + L LL+ +++ ++ L Q D+K Sbjct: 254 ALLHAVAVVKAGVFGIVRVIDDVYGIGVASELGVLTPLLVVACVTIIYGSYQALRQIDLK 313 Query: 312 RLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLN 371 + LA+S+V + VAV + + G+ + H+++ + K LF +G G + ++ Sbjct: 314 KRLAFSTVSQVSYVAVGISLATVAGVTGGVAHLVHQGIMKITLFFCAGLYAETLGAKRVD 373 Query: 372 VVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTL 431 + G+ MP T++ F GA + G+PP F+S++ L +H ++ +L+ L Sbjct: 374 QLTGLGHRMPGTSLAFTIGAFGMIGLPPTAGFISKWQLGVGALEADHSWVVAVLVASSLL 433 Query: 432 VLAGLVRMAARVLMAKPPQA 451 + + R+ KP + Sbjct: 434 NSMYFLPIVYRLWFRKPDRD 453 >UniRef50_C5EMF1 NADH dehydrogenase n=2 Tax=Clostridiales RepID=C5EMF1_9FIRM Length = 497 Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats. Identities = 137/511 (26%), Positives = 226/511 (44%), Gaps = 30/511 (5%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M +V+ L +L P++ L + R + + + +L+ ++ Sbjct: 1 MDGNVILLLPVLIPIVMGSLVLTVKGFRKNRNVLIAAVAGTLAAGVLLTWAALLTGGRLT 60 Query: 61 GEIFAAGLW--LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 + L +DG+G LF A+ I L GIYS YM HE ++GF Sbjct: 61 LWQMTEHITVALAVDGVGRLFAALTSGIWLLVGIYSFSYMTHEKDE--------FRFFGF 112 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAF 178 + + L ++ + S NL+ + E TL+S LV + ++ A KY+ G Sbjct: 113 YLIVLGVLIALDFSANLVTFYVCYEMMTLTSLPLVLHEMTKEAVMAGLKYLFYSVAGAFL 172 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 LFG +Y+ A S+ + + L L A +L+GFGTK G+FP+ Sbjct: 173 ALFGIFYLYSVAESLTFTP-----GGVAMGLPANGHDGLFLGAVCCMLVGFGTKAGMFPL 227 Query: 239 HAWLPDAHSEAPSPVSALLSAVLLNCALLVLIR--YYIIICQAIGSDFPNRLLLIFGMLS 296 H WLP AH AP+P SA+LS ++ +L LIR YYI+ + + + + +L+ Sbjct: 228 HGWLPTAHPVAPAPASAVLSGLITKSGVLALIRVAYYIVGPDRLRGTWVQDVWMFLALLT 287 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 V + + + +K+ LAYS+V + + LG+ G AL H++ HSL K LF Sbjct: 288 VFMGSMLAYKEPVLKKRLAYSTVSQVSYIIFGLGLFNGTGFVGALSHVVFHSLVKNGLFL 347 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 +G V+ K G + + G+ ++MP + +LAL G+PP + F+S++ T LA Sbjct: 348 AAGAVIFKTGWTRTSEMDGLGRVMPVMLGCYTLVSLALIGIPPASGFVSKWYLATGALAS 407 Query: 417 N----HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP--------QAVNRGDLGWLTTSP 464 L V+LL+ L L+ +A R + + + WL P Sbjct: 408 GTGVWSWLGPVILLISALLTAGYLLPLAIRGFFPGADFDEGEIRARGLAGQEPSWLMMVP 467 Query: 465 MVILLVMMLAMGTHIPQPVIRILAGASTIVL 495 M+ L + G P P+I +L + VL Sbjct: 468 MLALTAGAILFGC-FPGPLISMLKSIAATVL 497 >UniRef50_C5C4D6 NADH dehydrogenase (Quinone) n=2 Tax=Micrococcineae RepID=C5C4D6_BEUC1 Length = 999 Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats. Identities = 121/514 (23%), Positives = 211/514 (41%), Gaps = 32/514 (6%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 + + L L+ +L +R + + ++ + + A Sbjct: 4 LLTVHLAVALVGPVLVRLWGRRMFAVLALAPLSATVWALAQTPAVMAGDAPVVTTSWVPA 63 Query: 66 AGL--WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 G+ +D LG + I+G +G L +Y Y L + G F F Sbjct: 64 LGIDLSFRLDVLGWFMVLIVGGVGALVLLYCAWYFA-------SGASNLPRFAGVFVAFA 116 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFGLFG 182 ML +VT++N ++A E TT+ S L+G Y R S AA + II+ T G L G Sbjct: 117 GAMLGLVTTDNTFALYAFWELTTVFSYLLIGHYFDRKVSRRAAMQAIIVTTFGGLVMLAG 176 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 V++ E+ +S + L+ +A V +L+G +K+ L P H WL Sbjct: 177 LVMLGELPGGSYSLTELV---------ASAPESPLLPIAIVCVLVGAVSKSALVPFHFWL 227 Query: 243 PDAHSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 P A + AP+PVSA L A ++ + ++ R LL+ ++ + Sbjct: 228 PSAMA-APTPVSAYLHAAAMVKAGVYLVARLAPGYSTLPA---WQWTLLVLASATMILGG 283 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 + L Q D+K LLAY +V +G + + +G A L + H++ K LF G V Sbjct: 284 YRALRQHDLKLLLAYGTVSQLGFLILLVGQPSRAVALAGLALLGAHAMFKAALFLSVGIV 343 Query: 362 LLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN---H 418 GTRDL + G+++ PF AV+ G ++ G+PPF ++++ + + Sbjct: 344 DAAAGTRDLRQLSGLVRTQPFLAVVAGLATASMIGLPPFAGYVAKEAALEGFVHDGDPTS 403 Query: 419 LLIIVLLLLLLTLVLAGLVRMAARVL-MAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGT 477 ++++ +++L L +A +R + K W + +L V LA G Sbjct: 404 IMLLAVVVLGSILTVAYGLRFWWGAFGIKKDLADTEVDREAWPMFAAPTVLAVAGLAAGL 463 Query: 478 HIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDF 511 +P R+L + +G P + W F Sbjct: 464 -VPALGERLLEPFADTYPTGD---PGHLTLWGGF 493 >UniRef50_A9B6Y1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B6Y1_HERA2 Length = 517 Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats. Identities = 103/492 (20%), Positives = 197/492 (40%), Gaps = 31/492 (6%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF 64 + +L++ P + +++ R +R +A +L + L + L+ + A + + Sbjct: 10 TILSLVVFLPAVGAIILAFMRGQRGAARIFALGWSTLVFAVSLPI-LFNFKHDAAGLQFY 68 Query: 65 AAGLW---------LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 W L +DG+ + + + L ++ Sbjct: 69 EYFNWIPDWGVRYELGLDGISLWLVLLTTFVTPLAIW-----------SAWNVEEKTNNF 117 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVG 175 L ML V + +L + + E T + FL+G++G + + A K+ + Sbjct: 118 LMLILLQEMGMLGVFLAQDLFLFYIFWEFTLIPMYFLIGMWGGKRRIYATVKFFLYTFAA 177 Query: 176 VAFGLFGTVLV------YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGF 229 F L G + + Y + + L T + L F+ + F Sbjct: 178 SVFMLIGIIALGLLNYKYLAQQGLPTDTAFQVQTLMANINQFGLSDTELKLLFLSFFVAF 237 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K L+P+H WLPDAH EAP+ S +L+AVLL +IR+ + + I ++ + Sbjct: 238 AVKVPLWPVHTWLPDAHVEAPTAGSVILAAVLLKMGGYGMIRFCVQLFPQIAQEWARP-I 296 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 + ++ + A Q DIK+L+AYSSV +MG + + + +G+ A+L ++NH L Sbjct: 297 ALLAVIGIIYGAVLSYAQSDIKKLVAYSSVSHMGFIVLGIFALNEVGLQGAVLQMINHGL 356 Query: 350 AKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 + LF G V + TR+L G+ K++P +A G+P N F+ EF+ Sbjct: 357 STGALFLLIGMVYERTHTRELADYGGLWKVVPVFVYFLLFATMASVGLPGLNGFVGEFLI 416 Query: 410 ITAGLARN-HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRG--DLGWLTTSPMV 466 + + + L L++M + + DL + ++ Sbjct: 417 MLGAFDSPIGWTFTAFAAVGVILAAVYLLKMFQGIASGPFSERRTPHLSDLTRREVAILL 476 Query: 467 ILLVMMLAMGTH 478 L ++ML +G + Sbjct: 477 PLCILMLVIGLY 488 >UniRef50_A1ALK0 NADH dehydrogenase (Quinone) n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALK0_PELPD Length = 473 Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats. Identities = 116/428 (27%), Positives = 202/428 (47%), Gaps = 19/428 (4%) Query: 69 WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLL 128 +L +DG+ L L +G++ + SI +R + + L L M Sbjct: 63 FLRVDGISMLMLLAIGLVVAASSAISIPMIRDDTQRHN--------FVNLVLLSLLGMNG 114 Query: 129 VVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 +V +L ++ +E ++ S L+ + G+R + A+ YII+ V L +++ Sbjct: 115 MVMVTDLFSLYVFLEIVSVCSFILIALCGEREMFQGAFTYIILSAVATMLMLTSIAILFL 174 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 A + F + ++ ++L V LIG K G+ P H WLPDA+S Sbjct: 175 YAGNTS-------FTTLAAAIAAQQGNAMVLFGVVLFLIGLFIKGGIVPFHGWLPDAYSS 227 Query: 249 APSPVSALLSAVLLNC-ALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQ 307 + +PVS LL+ ++ + LIR + + N +LL G LS+ A L Q Sbjct: 228 SVAPVSILLAGIVTKVSGVYTLIRLVTEVFGP--TPRTNEVLLFVGTLSIVAGALGALGQ 285 Query: 308 RDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGT 367 RD KR+LAYSS+ +G + + LG G LGI A+ H+ NH++ KT LF + V + G+ Sbjct: 286 RDFKRMLAYSSISQVGYIVLSLGAGNALGIAGAIFHLFNHTVFKTQLFMNATAVEEQTGS 345 Query: 368 RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLL 427 RDL + G+ MP T L+ AG+PP F S+ + + A + H + +++ +L Sbjct: 346 RDLERMGGLASRMPVTGWTSIIAFLSAAGIPPLAGFWSKLVIVMALVRSGHEIYMMIAIL 405 Query: 428 LLTLVLAGLVRMAARVLMAKPPQAV-NRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRI 486 L LA + + +V + + + + GWL T+P ++ +++ G IP + I Sbjct: 406 ASLLTLAYFLTLQRKVFFGEIVEEFKDVREAGWLVTAPALVFAAIIVITGLAIPFLLNTI 465 Query: 487 LAGASTIV 494 + +I+ Sbjct: 466 ILPIGSIL 473 >UniRef50_Q0ARA4 NADH dehydrogenase (Quinone) n=3 Tax=Hyphomonadaceae RepID=Q0ARA4_MARMM Length = 507 Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats. Identities = 133/503 (26%), Positives = 233/503 (46%), Gaps = 25/503 (4%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAAD---AGEIF 64 AL+++ PL+ + + RL T+ + + L +L Q G Sbjct: 18 ALIVVIPLIMAAVSALMPNGRLGWLVTLITSALVAVLALNLLGQVATQDVISYHLGGWAP 77 Query: 65 AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLF 124 G+ +D L L ++G++GFL IY++ + E+A + +Y F + Sbjct: 78 PLGIEYRVDMLNIPLLLVVGIVGFLCVIYALPSVADEIAENKQ-----ALFYSAFLVCFA 132 Query: 125 TMLLVVTSNNLIVMWAAIEATTLSSAFLV--GIYGQRSSLEAAWKYIIICTVGVAFGLFG 182 +L V + + ++ +E +++S+ ++ G R +L A++ Y+I+ T+G F + G Sbjct: 133 GLLGVTITGDAFNVFVFLEISSISTYVIIAMGAGKDRRALTASYNYLILGTIGATFFVIG 192 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 +Y ++ AI + AF F+++G G K +FP+H WL Sbjct: 193 VGFLYMATGTLNMADMAAILEETG-------HNRVTQAAFAFIVVGLGLKAAMFPLHLWL 245 Query: 243 PDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQA---IGSDFPNRLLLIFGMLSVAV 299 P+A++ AP+ V+A L++ A LIR+ + S L + G +++ V Sbjct: 246 PNAYAFAPNFVTAFLASTATKVAFYALIRFLFSVFHPDVSFVSMSFTWLFAVVGTIAMVV 305 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 A+ + Q D +RLLAYSSV +G + + LG+G G+ A LLH++NH+L K LF G Sbjct: 306 ASLQAVFQTDARRLLAYSSVAQVGYMMLGLGMGTASGLSAGLLHLMNHALMKGALFMALG 365 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 L +G R + + GM K MP +A F L+L G+P F S++ +TA L R Sbjct: 366 AFALNFGVRRVKDLAGMSKTMPASATAFTIAGLSLVGVPLTVGFTSKWYLVTAALERGWW 425 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLGWLTTSPMVILLVMMLAM 475 + L+L L LA + R+ + + M PP + + R W+ PM L + + Sbjct: 426 WAVAALMLSSLLALAYVARLLSAIWMDAPPSHHGELMQRRLAPWMVLVPMSFLALANVYF 485 Query: 476 GTHIPQPVIRILAGASTIVLSGT 498 P++ + A+ V+ G Sbjct: 486 -FFHADPLVWLARSAAEAVMGGN 507 >UniRef50_Q2FKT7 NADH dehydrogenase (Quinone) n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FKT7_METHJ Length = 643 Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats. Identities = 134/508 (26%), Positives = 231/508 (45%), Gaps = 46/508 (9%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA-- 60 S +F ++L L ++ RK+R+ + ++ + + L L +V +A Sbjct: 1 MSEIFLFIILLYALSGVIPLCIRKKRIWSVSSIIMGGGGILLTLFSLPFLLVSSAKTILF 60 Query: 61 -GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 G + + ID L LF +LG++ +Y+ GY+ + V+ G Sbjct: 61 QGAWVTFPIRIGIDRLSALFCILLGLLSLAVALYTPGYLDRMHGNRRTYVVS-----GLI 115 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVAF 178 LFL +MLLV+ + +I E + S FLV + AA Y+ + + F Sbjct: 116 PLFLLSMLLVIMAETVIAFLVFWELMAILSFFLVLTEFEEEKTRYAALFYLAMTQISTVF 175 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 G +L+ S ++ L+ L+F+ L G K+G+ P Sbjct: 176 VFLGILLIRLGTGSWEYPVHLS------------GSDPLISLSFLCLFFGIAIKSGVIPF 223 Query: 239 HAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 H WLP AH APSPVSAL+S ++++ AL LIR + L+L FG L+ Sbjct: 224 HKWLPHAHPAAPSPVSALMSGMMISTALYALIRVVTGFYAPDAA--WGFLILAFGCLTAV 281 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGI-----------GGPLGIFAALLHILNH 347 + + L ++D+K LLAYSS++N G++ + +G+ + I A+ H ++H Sbjct: 282 LGVMYALKEQDLKGLLAYSSIDNTGIILIGIGLWVLFTVFGSQTLALMAIAGAVFHAISH 341 Query: 348 SLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 L K LLF +G+V GTR+++ + G+L MP+T LF G L++A +PPF+ F+ EF Sbjct: 342 GLFKGLLFLTAGSVCQAAGTRNIDEMGGILVRMPWTGGLFFIGVLSIASIPPFSGFIGEF 401 Query: 408 MTIT---AGLARNHLLIIVLLLLLL-------TLVLAGLVRMAARVLMAKP--PQAVNRG 455 + I GL+ L+ ++++++L L + V+ +A P A Sbjct: 402 LIIMSLIGGLSELSPLLQIVMVVVLSLFSLTGALTVTTFVKAFGLTFLALPRSEGADKAR 461 Query: 456 DLGWLTTSPMVILLVMMLAMGTHIPQPV 483 ++ W + +L +M +G Q Sbjct: 462 EVPWPMYAGPAVLALMSAGLGIFSGQVF 489 >UniRef50_Q67P11 NADH dehydrogenase I subunit L n=1 Tax=Symbiobacterium thermophilum RepID=Q67P11_SYMTH Length = 640 Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats. Identities = 117/453 (25%), Positives = 190/453 (41%), Gaps = 33/453 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA----- 60 M +++ PLL + + R + + S+ I+ L +A+ A Sbjct: 1 MLPAIVVVPLLSAAIVGYFRNTWSKSLVSWVACGSVAISFALTVAVAAQYWGGGAVAPIR 60 Query: 61 ----GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 L L DGL + ++ G L IYS YMR + ++G + Sbjct: 61 SALTSWGSLLDLGLVADGLSLWWALVVTGAGLLIHIYSTAYMREDESYG--------RFM 112 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVG 175 + F+F M L+V S+N + + L+S L+G Y R + AA K ++ +G Sbjct: 113 AKMNFFIFAMTLLVLSDNFVGLAMGWGCVGLASYMLIGFYFTRPGAQNAAIKAFVMNIIG 172 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGL 235 A G +YAN S + S+L L+LL K+ Sbjct: 173 EAGLFAGIAFIYANFGSFKFDDVFGAIAQGPVSASALNLIGLLLLIGA------AAKSAQ 226 Query: 236 FPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 P+H WLP A E P+PVSAL+ A ++ + ++ R Y I A G+ + G Sbjct: 227 LPLHTWLPYAM-EGPTPVSALIHAATMVTAGVYLVSRAYPIYEVATGAAMA---VAWIGG 282 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLL 354 L A Q DIKR+LA+S++ +G + + G+G AA H H+ K L Sbjct: 283 LGALFGALVAAGQFDIKRVLAFSTLSQIGYMFLANGLG---AYVAADFHFFTHAFFKACL 339 Query: 355 FCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 F +G V+ YG +D+ + G+ F + FG ALAL G+PPF F S+ + A Sbjct: 340 FLAAGIVVHHYGGDQDIRHMGGLWYRDRFAGLTFGAAALALIGLPPFAGFFSKDEILLAA 399 Query: 414 LARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA 446 ++ + + ++ L VR+ + V + Sbjct: 400 YSQGQWALFAIAIVAAGLTAFYNVRLFSLVFLG 432 >UniRef50_D2R5F8 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5F8_9PLAN Length = 600 Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats. Identities = 108/489 (22%), Positives = 193/489 (39%), Gaps = 39/489 (7%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 + +F + PL ++L + +A R + +L + + + G Sbjct: 1 MTSLFITTVFLPLAGAILMWILAPLGKNAVRFGALGVTLATLVCTAIVVASFPADGAKGA 60 Query: 63 IFAAGLW---------------LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGEL 107 F W L +DGLG + ++ + S ++ A Sbjct: 61 EFCTVDWPWLAQSGSLLDIRFSLALDGLGLWMFGLSALLMVTAVLVSWEAIKEREA---- 116 Query: 108 SPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWK 167 ++G L F L V T+ +LI+ + E T + FL+GI+G AA K Sbjct: 117 ------LFFGMLLLLEFGCLGVFTARDLILFYVFFEFTLIPLFFLIGIWGSEDRKYAASK 170 Query: 168 YIIICTVGVAFGLFG--TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFL 225 + + G G ++V+ + + +I + + L P L F+ L Sbjct: 171 FFLYTLAGSLLTFLGLLVIVVWCYQQEGVGKLVFSIPELTATLRDAPLPPAWQLAVFIAL 230 Query: 226 LIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFP 285 GF K LFP+H WLP AH +AP+ S +L+ VLL + +R+ + + Sbjct: 231 FAGFAIKVPLFPLHTWLPLAHVQAPTAGSVILAGVLLKIGVYGFLRFSVPMLPDATVTCM 290 Query: 286 NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 LL ++ + A L Q D+KRL+AYSSV ++G + L PLG+ ++L ++ Sbjct: 291 PYLL-WLSVIGIIYGALVALAQGDMKRLIAYSSVSHLGYCTLGLFALNPLGVQGSVLQMV 349 Query: 346 NHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 NH L+ LF G + +Y TR++ + G+ + P+ + + G+P N F Sbjct: 350 NHGLSTGGLFAVIGMLYERYHTREIKQLGGLARQTPWLSFFMLIFTFSSIGLPGLNGFPG 409 Query: 406 EFMTITAGLARNH-----------LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR 454 EFM + R + I VL + + L ++ + V + + Sbjct: 410 EFMILLGMFQRAWAQSSVENFSQLMTIAVLAVTGVVLGAWYMLWLVQHVFFGPLKEPADD 469 Query: 455 GDLGWLTTS 463 + + Sbjct: 470 HGHAPVAVA 478 >UniRef50_A0B819 F420H2 dehydrogenase subunit M n=2 Tax=Methanosarcinales RepID=A0B819_METTP Length = 502 Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats. Identities = 112/506 (22%), Positives = 205/506 (40%), Gaps = 26/506 (5%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAA 66 ++++ PL+ ++L F R R R V ++ SL L + ++ + + Sbjct: 6 ISIMIAVPLVGAVLAFLTRSR--GQARLVALIASLVPLALALQMYTEFDKSSKLMQFVES 63 Query: 67 GLWL---------HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 W+ +D + + + ++ L IY+ G ++ Sbjct: 64 YDWVPSIGVRYTVGVDCISFPLVLLTAIVSVLVVIYAWG-----------ENHRPNQFFA 112 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVA 177 L +L V T+ + + + E + FL+GI+G +A K+ I V Sbjct: 113 LLLLNEVGVLGVFTALDFFLFYIFWEIVLIPMFFLIGIWGGPRKDYSAIKFFIYTHVASL 172 Query: 178 FGLFGTVLVYANAASVMPQAEMAIF-WSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLF 236 L +Y + + ++ P L+ F LL GF K F Sbjct: 173 VMLLAIFAMYFTYRLPDGSRTFDMLTLLQATSDKTVFPPGLINAIFAGLLFGFLVKMPAF 232 Query: 237 PMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 P H WLPDAH EAP+ S +L+A+LL + R + + + F ++ + G+LS Sbjct: 233 PFHTWLPDAHVEAPTAGSVVLAALLLKMGGYGIFRVILPMLPHVDKAFV-TVIAVIGVLS 291 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + AF L Q+DIK+L+AYSS+ +MG V + L I A+ +H + LF Sbjct: 292 IIYGAFLALAQKDIKKLVAYSSISHMGFVTLGAVAFTWLSIQGAMFQQFSHGIITCALFM 351 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 +G + GTR ++ + G+ MP A L LA G+P + F++EFM +T Sbjct: 352 SAGTIQHSVGTRIISELGGLADRMPKFASLMLAAFLASLGLPGMSGFVAEFMVLTGSYPT 411 Query: 417 NHLLIIVLLLLLLTLVLAGLVRMAARVLMAK-PPQAVNRGDLGWLTTSPMVILLVMMLAM 475 + ++++ + + + +VL + ++ D M ++ + L Sbjct: 412 FPVYTMLVVFTSVGVTAGYHLWACQKVLFGPILKKYLDLHDPHAYEILAMSAIVFLTLLF 471 Query: 476 GTHIPQPVIRILAGASTIVLSGTHDL 501 G P + ++ A+ V+ L Sbjct: 472 GLQ-PALITDMMGTAAHQVMEPVVTL 496 >UniRef50_Q35099 NADH-ubiquinone oxidoreductase chain 5 n=58 Tax=Metazoa RepID=NU5M_METSE Length = 600 Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats. Identities = 123/534 (23%), Positives = 225/534 (42%), Gaps = 42/534 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 M+ L+L PLL +L+ ++ + L I+L L ++ T + Sbjct: 1 MYILVLTVPLLGALVSGLFGRKIGEKGAGIFTSGCLIISLSWSLLIFYETTLNFSTTYIK 60 Query: 66 AGLWL-----------HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 WL D L + L ++ I L I+S YM + + Sbjct: 61 LWRWLDSDLVTAYFGLQFDSLTAVMLIVVTSISTLVHIFSTAYMDGDPH--------VPR 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICT 173 + + LF F M+L+VTS+N ++ E L S L+ + R + +AA K +++ Sbjct: 113 FMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNR 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 VG + + ++ + ++ V +L L +FL IG K+ Sbjct: 173 VGDIGFVLAMLAIWDQFG--------CLDFASVFNIVALAPSDNTTLICLFLFIGAVGKS 224 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 +H WLPDA E P+PVSAL+ A ++ + +LIR ++ QA ++ I Sbjct: 225 AQLGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLLIRSSPLLEQA---PMALMVVTIV 280 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G L+ +AA LVQ D+K+++AYS+ +G + + G+ +L H++NH+ K Sbjct: 281 GSLTAFMAATIGLVQNDLKKVIAYSTCSQLGYMVMACGLSQ---YSISLFHLMNHAFFKA 337 Query: 353 LLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 LLF +G+V+ +D+ + G+++ +PFT + G+L+L G P F S+ + + Sbjct: 338 LLFLSAGSVIHALADEQDMRKMGGLIRSIPFTYTMIVIGSLSLMGFPYLTGFYSKDLILE 397 Query: 412 AGLARNHLLII-VLLLLLLTLVLAGLVRMAARVLM----AKPPQAVNRGDLGWLTTSPMV 466 + +L L + L A +R+ + AK + W T P++ Sbjct: 398 LAYDQYYLAFAHWLGVFSALLTAAYSLRLIYLTFISNTNAKKEVFSQAHEGSWNLTLPLI 457 Query: 467 ILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVS 520 +L + + +G + + S I+ + +P S + S Sbjct: 458 LLALGSIFVGYLTKEIIWSFQITLSPIIPTSIKLMPVIFSLFGAGTAVVLYHYS 511 >UniRef50_A5UV30 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria RepID=A5UV30_ROSS1 Length = 793 Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats. Identities = 139/522 (26%), Positives = 237/522 (45%), Gaps = 34/522 (6%) Query: 11 LLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAA---- 66 +L+ ++ + + L + + I + V +A Sbjct: 5 VLSGFGGAIAAPWLHRFAPRHAGWLAALLPFALMIYFISLVPAVAGGDALRFSYAWVPGL 64 Query: 67 --GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLF 124 L IDGL LF ++ IG L IY+ GY+ ++ G + +F+ Sbjct: 65 GVNLSFRIDGLSLLFALLITGIGTLVLIYAGGYLANDPMLGRML--------TLLLIFMA 116 Query: 125 TMLLVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGT 183 ML +VTS+NLI ++ E TT+SS L+G + + +AA + +++ +G L G Sbjct: 117 AMLGIVTSDNLIALFVFWELTTISSYMLIGYKHEYEKARKAALQSLLVTGIGGLALLAGI 176 Query: 184 VLVYANAASVMPQAEMAIFWSEVLKQSSLL-DPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 VL+ A ++ SE+LKQ ++ L +L G TK+ FP H WL Sbjct: 177 VLLGQIAGTLE--------LSEMLKQGDVVRAHPLYGGILALVLFGAFTKSAQFPFHFWL 228 Query: 243 PDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 P A EAP+PVS+ L SA ++ + +L R ++ G++ LL FG ++ V + Sbjct: 229 PGAM-EAPTPVSSYLHSATMVKAGVFLLARLNPVLG---GTEAWQLLLTFFGGATMIVGS 284 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 F + Q D+KR+LAY++V +G + + +G+G I AA++ L H+L K LF +G+V Sbjct: 285 FLAVQQTDLKRILAYTTVSALGTLVLLIGVGTDDAIKAAMVFTLGHALYKGALFQVAGSV 344 Query: 362 LLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLI 421 + G RD++ + G+ MP TA AL++AG+PP F+++ + A L+ L+ Sbjct: 345 DHETGARDISQLGGLRTAMPITAAAAMLAALSMAGLPPMLGFIAKEVQYKANLSEPILIG 404 Query: 422 IVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR-GDLGWLTTSPMVILLVMMLAMGTHIP 480 + LL +LT+V AG V + RV +P + V L + L G Sbjct: 405 VALLTNILTVVAAGFVSL--RVFTGQPVHTPKHAHEAPLSMWLGPVALALGGLGAGLFST 462 Query: 481 QPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEK 522 Q ++ A+ VL + W + +++ Sbjct: 463 QIGNFLIGPATGSVLGKVKAVEL--VLWAGIEGAAGQALALS 502 >UniRef50_A9WT02 Potassium efflux system protein n=8 Tax=Actinomycetales RepID=A9WT02_RENSM Length = 552 Score = 293 bits (752), Expect = 8e-78, Method: Composition-based stats. Identities = 109/464 (23%), Positives = 213/464 (45%), Gaps = 22/464 (4%) Query: 1 MSYSVMFALLLLTPLLFSLLCFAC----RKRRLSATRTVTVLHSLGITLLLILALWVVQT 56 ++ + + L ++ P L + + F + ++ + +T+ L ++LL + Sbjct: 8 LTLASLTPLAIILPFLGAAVAFLLIRHPKAQQAVSIGVLTITLLLELSLLAQVWNGGTVA 67 Query: 57 AADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 G + G+ L +D L L + V+G IY+ G + A + + ++ Sbjct: 68 VNLGGWLPPWGVVLVVDQFSSLMLVVSSVVGLAVLIYATG----QGAADGDAEGPVSIFH 123 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGV 176 + + + + S +L ++ E +S L+ + G + A Y+++ V Sbjct: 124 PTYLILMAGVSNAFLSGDLFNLYVGFEILLTASYVLMTLGGTGPRVRAGVTYVVVSVVSS 183 Query: 177 AFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLF 236 L ++Y AI +++ + + LD + + LLI FG K +F Sbjct: 184 LLFLIAIAMIYGATG--------AINMADLAVKLANLDQGTQTMLHLMLLIAFGIKAAVF 235 Query: 237 PMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 P+ WLPD++ AP+PV+A+ + +L + ++R ++ D N L++ +L+ Sbjct: 236 PLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAMVRTETLLFP---GDTLNDFLMVVALLT 292 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + V + Q DIKRLL+++ V ++G + L I LG+ AA+ ++++H +T LF Sbjct: 293 MVVGILGAIAQTDIKRLLSFTLVSHIGYMVFGLSISSKLGLGAAVYYVVHHITIQTSLFL 352 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 +G + + GT ++ + G+ K+ P VLF A+ LAG+PPF+ FL + + AG A Sbjct: 353 VTGLIERRGGTTSIDRLGGLAKLSPILGVLFFIPAMNLAGIPPFSGFLGKLGLLQAGSAL 412 Query: 417 NHLLIIVLL---LLLLTLVLAGLVRMAARVLMAKPPQAVNRGDL 457 L VL+ + + L L + R+ R P +A N + Sbjct: 413 GTPLAWVLVGGSVAVSLLTLLAIARVWNRAFWRSPEEAENPEPV 456 >UniRef50_Q1QZ48 NADH dehydrogenase (Quinone) n=15 Tax=cellular organisms RepID=Q1QZ48_CHRSD Length = 932 Score = 293 bits (752), Expect = 8e-78, Method: Composition-based stats. Identities = 133/485 (27%), Positives = 230/485 (47%), Gaps = 30/485 (6%) Query: 48 ILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGEL 107 +LA V + A L L +DGL +F+ ++ IG L +Y+ Y+ Sbjct: 50 VLAGDVPRLAFSWVPALGLDLALRLDGLSLMFVLLILGIGLLIILYARHYLS-------- 101 Query: 108 SPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAW 166 + ++ +Y F LF+ ML +V ++NLI++W E T+LSS L+G + +S+ A Sbjct: 102 TADSMPRFYAFLMLFMAAMLGIVMADNLILLWMFWELTSLSSFLLIGFWNHQSAARKGAR 161 Query: 167 KYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLL 226 + + +G L G +L+ + Q + + +LD L A + +L Sbjct: 162 MALAVTGMGGLALLAGLILIGQIVGTFDMQTVLD-------SRDVILDDPRYLPALLLIL 214 Query: 227 IGFGTKTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFP 285 +G TK+ FP WLP A + AP+PVSA L SA ++ + +L R + + GS Sbjct: 215 LGAFTKSAQFPFQFWLPQAMA-APTPVSAFLHSATMVKAGVFLLARLHPAL---AGSQEW 270 Query: 286 NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 L+ + G++++ A+F L++ D+K +LAYS+V ++GL+ + G+ + + A L HIL Sbjct: 271 LYLVSLTGLVTMLYGAYFALIKLDLKAILAYSTVSHLGLITMLFGLDSRMAVVAGLFHIL 330 Query: 346 NHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 NH+ K LF +G V + GTRD+ + G+ + MP T L A ++AG+P FN FLS Sbjct: 331 NHATFKAALFMTAGIVDHECGTRDIRKLKGLWRYMPMTTALAAITAASMAGVPLFNGFLS 390 Query: 406 EFMTITAGLARN-----HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR--GDLG 458 + M + L LI L + L + +R P+ + + + Sbjct: 391 KEMMLAETLGTPLLGGLAWLIPTLATVGSILAASYSLRYVRNTFFDGKPRELEKTPHEAP 450 Query: 459 WLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDF-LPSGTA 517 + P++IL ++ + +G +P L A+ S WH F LP + Sbjct: 451 FPMRLPILILAIICVVVGI-LPALTTTDLLTAAADAALVGAAPELHLSIWHGFNLPLLMS 509 Query: 518 SVSEK 522 +++ Sbjct: 510 AIALA 514 >UniRef50_B9LT20 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LT20_HALLT Length = 798 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 125/512 (24%), Positives = 212/512 (41%), Gaps = 29/512 (5%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 + + P + ++L R+ RT + +LA V Sbjct: 7 IVTTAVALPFVAAVLSPLLY--RVLGERTGYAGAVVAAASFGLLATEVNSHGTVGASWVP 64 Query: 66 A---GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 A G+ +DG G LF + IG L +YS YM E L YY F Sbjct: 65 ALDVGVQFTVDGWGLLFALLASGIGVLVFVYSAAYMHGEEG--------LARYYAALLAF 116 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYIIICTVGVAFGLF 181 + ++L V +++L+ ++ E T+L S L+G Y S +A +++ G L Sbjct: 117 MGSILGVALASDLVFIFLFWELTSLCSFVLIGHYTDDSESRYSARMAMVVTVGGGLCLLA 176 Query: 182 GTVLVYANAASVMPQAEM---AIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 G +++ A + A+ ++ ++SL + L + A ++ K+ P+ Sbjct: 177 GLLMLAVAARGALGGVTFDLTAMIANDEAMRASLRESGLFVPALGLIVAAAAAKSAQVPL 236 Query: 239 HAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSV 297 H WLP+A AP+PVSA L SA ++ + L R ++ S ++ G+L++ Sbjct: 237 HFWLPNAMV-APTPVSAFLHSATMVKVGVYFLGRVRPLLM----SPEWVLVVATLGLLTM 291 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 V A + D K LLAYS+ ++GL+ G G A H+LNH+L K LF Sbjct: 292 TVGALLAVAATDTKELLAYSTASHLGLMVAGFGFDIVYGGEAGAFHLLNHALFKAPLFLV 351 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 +G + + GTR+L+ + G+ + +P TA + AL++AG+PPFN F S+ + A Sbjct: 352 AGIIAHEAGTRNLDNLGGLWRELPVTAAITVVAALSMAGIPPFNGFYSKELLFEATYEVA 411 Query: 418 H------LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVM 471 H L + L L + V+ A + + P +L + Sbjct: 412 HEAGGIAWLYPTVATLASVLTVVYSVKFLALFFGERRAPTADIHRPPIGLVGPPAVLAIA 471 Query: 472 MLAMGTHIPQPVIRILAGASTIVLSGTHDLPA 503 + + V I+ GA +G L Sbjct: 472 AVVVSVAPQLAVDAIVQGAVDATATGEAQLEV 503 >UniRef50_A0M796 Na(+)/H(+) antiporter subunit A n=5 Tax=Bacteroidetes RepID=A0M796_GRAFK Length = 782 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 128/512 (25%), Positives = 228/512 (44%), Gaps = 32/512 (6%) Query: 11 LLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL------WVVQTAADAGEIF 64 +LT LFS+ K + L L + + + V+ + + F Sbjct: 5 ILTGFLFSIFLVFAGKFFKGKLSILASLVPLALFVYFFQFISPISNGEVIMRSYEWIPSF 64 Query: 65 AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLF 124 L +DGL LF ++ IGFL Y+ Y++ L +YG+ F+ Sbjct: 65 GVDLGFKLDGLSLLFSLMITGIGFLVFAYTSSYLKGHEY--------LDRFYGYLGSFMG 116 Query: 125 TMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVAFGLFGT 183 ML +V S+N+I ++ E T++SS FL+G +S ++A + I +G F L G Sbjct: 117 AMLGLVLSDNMITLFVFWELTSISSFFLIGFNNTNPASRKSAMTALGITGIGGLFLLAGA 176 Query: 184 VLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLP 243 +L+ A + + + ++ L LA + + TK+ FP H WLP Sbjct: 177 LLLNNIAGTYSISEMLTMSE-------AIRGNELYFLAVLLIFGAAFTKSAQFPFHFWLP 229 Query: 244 DAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAF 302 A +AP+PVS L SA ++ + +L+R+ ++ G N L++ G ++ +A Sbjct: 230 GAM-KAPTPVSTYLHSATMVKAGIYLLMRFTPVLG---GEQIWNTTLILVGGFTMLYSAI 285 Query: 303 FILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVL 362 + + D+K +LAYS++ +G++ G+G AA + I+ H+L K LF +G + Sbjct: 286 HTVFRTDLKGILAYSTISALGILVFLTGLGTQEAFLAAAVFIVVHALYKATLFLVTGIID 345 Query: 363 LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLII 422 + TRD+ + G+ K+M + A++ AG+PP F+ + +T A L+I Sbjct: 346 HQTHTRDITRLAGLNKVMLPVGIAGILAAISSAGIPPTIGFVGKELTYEASYHAESLVIF 405 Query: 423 VLLLLLLT---LVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHI 479 +L+ ++LT L+ AG V P + N G++ P ++L V+ + G Sbjct: 406 LLIAIVLTKILLLYAGFVAGIKPFTGKLPEEHSNVKMPGFIMWGPPLLLAVLGVVFGVAP 465 Query: 480 PQPVIRILAGASTIVLSGTHDLPAQRSTWHDF 511 ++ T + G + WH F Sbjct: 466 FIIESALIKPVVTAM--GGDASEIHLALWHGF 495 >UniRef50_P29388 NADH-ubiquinone oxidoreductase chain 5 n=133 Tax=Eukaryota RepID=NU5M_ARATH Length = 669 Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 108/493 (21%), Positives = 200/493 (40%), Gaps = 37/493 (7%) Query: 6 MFALLLLTPLLFSLLC-FACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA---- 60 M+ L++ PLL S + F R + +T ++L ++A + V A A Sbjct: 1 MYLLIVFLPLLGSSVAGFFGRFLGSEGSAIMTTTCVSFSSILSLIAFYEVALGASACYLR 60 Query: 61 ------GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 E+F A D L + L ++ I L +YSI YM + Sbjct: 61 IAPWISSEMFDASWGFLFDSLTVVMLIVVTSISSLVHLYSISYMSEDPH--------SPR 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICT 173 + + +F F ML++VT +N + ++ E L+S L+ + R + +AA K +++ Sbjct: 113 FMCYLSIFTFFMLMLVTGDNFLQLFLGWEGVGLASYLLIHFWFTRLQADKAAIKAMLVNR 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSS-LLDPTLMLLAFVFLLIGFGTK 232 VG G + + +V A + + L + L IG K Sbjct: 173 VGDFGLALGILGCFTLFQTVDFSTIFACASVPRNSWIFCNMRLNAISLICILLFIGAVGK 232 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLI 291 + +H WLPDA E P+PVSAL+ A ++ + ++ R + S ++ Sbjct: 233 SAQIGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFMIARCSPLFEY---SPTALIVITS 288 Query: 292 FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAK 351 G ++ +AA ++Q D+KR++AYS+ +G + GI ++ H++NH+ K Sbjct: 289 AGAMTSFLAATTGILQNDLKRVIAYSTCSQLGYMIFACGISN---YSVSVFHLMNHAFFK 345 Query: 352 TLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 LLF +G+V+ +D+ + G+ P T + G+L+L G P F S+ + + Sbjct: 346 ALLFLSAGSVIHAMSDEQDMRKMGGLASSFPLTYAMMLIGSLSLIGFPFLTGFYSKDVIL 405 Query: 411 TAGLARNHL---LIIVLLLLLLTLVLAGLVRMAARVLMAK----PPQAVNRGDLGWLTTS 463 + + L + + R+ + D Sbjct: 406 ELAYTKYTISGNFAFWLGSVSVLFTSYYSFRLLFLTFLVPTNSFGRDISRCHDAPIPMAI 465 Query: 464 PMVILLVMMLAMG 476 P+++L + L +G Sbjct: 466 PLILLALGSLFVG 478 >UniRef50_B3QPF9 NADH dehydrogenase (Quinone) n=1 Tax=Chlorobaculum parvum NCIB 8327 RepID=B3QPF9_CHLP8 Length = 774 Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 129/520 (24%), Positives = 228/520 (43%), Gaps = 32/520 (6%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 ++ L++T S + + + V L + +L V + E Sbjct: 2 RNLSLLFLIITGFAVSAIAPYLYRLLKARFVWFGVAFPLTLFASFMLKYPQVASGVPVRE 61 Query: 63 ------IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 L +DGL F+ ++ +IG +Y+ Y+RH ++ Sbjct: 62 RWSWVPSLGLNLSFVLDGLSLTFVMLVTLIGAAVFLYASVYLRHYEE--------ADRFF 113 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEA-AWKYIIICTVG 175 GF +F+ +ML VV ++N+++++ E T++SS L+G + A A K +++ G Sbjct: 114 GFIGMFMTSMLGVVLADNMLLLFLFWELTSISSFLLIGFNHHAPTSRASALKALLVTGAG 173 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGL 235 L G +L+ + S + A+ + L +L+G TK+ Sbjct: 174 GLALLAGMLLLGSVTGSFEISSFYAMNDL-------ITSHRLYPAIVALILVGAFTKSAQ 226 Query: 236 FPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 FP H WLPDA + APSPVSA L SA ++ + ++ R+ + G+ +L+ G Sbjct: 227 FPFHFWLPDAMA-APSPVSAYLHSATMVKAGIYLIARFN---HEIGGTALWQDTILVAGA 282 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLL 354 ++ A Q D+KRLLAYS++ +G + + LGIG L I A ++++ HSL K L Sbjct: 283 TTMIFAGLLSYRQSDLKRLLAYSTLSVLGTLVMLLGIGSKLAIKAFFIYLIAHSLYKGTL 342 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 F +G + + GTRD++ + G+ K MP TAV + ++ G+ P F+ + A L Sbjct: 343 FLVAGTLDHETGTRDVSKLGGLWKAMPVTAVTAALASFSMMGVIPLIGFIGKETLYKAVL 402 Query: 415 ARNHL--LIIVLLLLLLTLVLAGLVRMAARVLMAKP-PQAVNRGDLGWLTTSPMVILLVM 471 ++IVL + L++ + R + KP P+ + IL + Sbjct: 403 EVQPWGRVLIVLAVAASALLVVVTFLVGFRPFLGKPRPELQKVHEAPVAMLVGPFILALS 462 Query: 472 MLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDF 511 L +G V +L ++ ++S D+ WH F Sbjct: 463 GLLLGLFPDFFVGHLLEESAVSIISQRLDIEI--ELWHGF 500 >UniRef50_B7GME2 NADH dehydrogenase subunit M n=6 Tax=Bacillaceae RepID=B7GME2_ANOFW Length = 503 Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 121/494 (24%), Positives = 208/494 (42%), Gaps = 33/494 (6%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI- 63 +LL+ +PLL L+ K + A + + VL +L L + A W + D ++ Sbjct: 4 YFLSLLIFSPLLGILVLSLFPKEQEKAIKWLGVLATLPSLCLSLFAFWQYRNGYDISKLS 63 Query: 64 ------------------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHG 105 F LH+DG + + + ++ L I S + Sbjct: 64 EKRSWIQFGDFPFLKETDFTVAYELHVDGFALVMIVLTTILATLAAIASTSIQKEWKG-- 121 Query: 106 ELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAA 165 Y+ F L ML V ++NL++ + E T + FL+G +G +AA Sbjct: 122 ---------YFQLFLLLEIGMLGVFAASNLVLFFIFFELTLIPMFFLIGKWGYFEKEKAA 172 Query: 166 WKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFL 225 + Y+I +G A L +++A + I + ++ S + L F+ L Sbjct: 173 YSYLIYNGLGSAVLLIVIAVLFARTGTSNIAELRYILTNSSVQTISPISDDLRYGLFLAL 232 Query: 226 LIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFP 285 L+ FG K + P+H W+ H +AP V L + VLL L+R + F Sbjct: 233 LVAFGVKLPIVPLHRWMLRVHVQAPPSVVMLHAGVLLKIGAFGLVRLAFGLFPGQFQQF- 291 Query: 286 NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 + L++ G++++ AF L Q D K +LAYSSV +MG++ + LG GI A+ + Sbjct: 292 STWLIVLGIVNLLYGAFLALRQTDFKMVLAYSSVSHMGIILIGLGSLNEAGIQGAIFQAV 351 Query: 346 NHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 +H LF G + + T L + GM K MP+ + GA+A G+P + F+S Sbjct: 352 SHGFIAAFLFFFVGVMYERTRTTTLARLGGMAKTMPYVSGFMLAGAMASLGLPGTSGFVS 411 Query: 406 EFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPM 465 EFM L + L + + L+R + + N DL + P Sbjct: 412 EFMAFVGAFQAAPWL-AAIGTLGIIMTAVYLLRAVLHMTFGQ-TAVTNVRDLRGIEWVPA 469 Query: 466 VILLVMMLAMGTHI 479 + LL++++ +G + Sbjct: 470 ISLLLLIIIIGVYP 483 >UniRef50_B6J444 Sodium/proton antiporter protein n=5 Tax=Coxiella burnetii RepID=B6J444_COXB2 Length = 768 Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 129/524 (24%), Positives = 243/524 (46%), Gaps = 40/524 (7%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF 64 ++ ++++T L+ +L+ + L LL I + ++ T G I+ Sbjct: 1 MLTGIVIITLLVSALVPIVVHYLKGPRLGWGLALIPF---LLFIYFIHLIPTIMHGGTIY 57 Query: 65 AAGLWL---------HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 + W ++DGL LF ++ IG IYS Y+ + L Y Sbjct: 58 SGFRWFPDLNINFSFYVDGLSLLFGLLITGIGIPIVIYSAPYLENHPH--------LTRY 109 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTV 174 YG+ LF+ +ML +V +NNLIV++ E T++SS L+G+ +R + AA + + + + Sbjct: 110 YGYLFLFMASMLGLVLANNLIVLFVFWELTSISSFLLIGLEHERPAARKAAVQALFVTVI 169 Query: 175 GVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 G L +L+ + ++ + + L + L + + +LIG TK+ Sbjct: 170 GGLSLLASFILIGIVTHTYSVAQLLS-------QGNLLQNQPLFVPILLLMLIGAFTKSA 222 Query: 235 LFPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFG 293 FP H WLP+A EAP+PVSA L SA ++ + +L R++ ++ + +L G Sbjct: 223 QFPFHFWLPNAM-EAPTPVSAYLHSATMVQVGIYLLARFHPLMSHNY---WWFVILTTIG 278 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 +++ + Q D+K +LAY+++ +G + LG L I AA+ +L H+L K Sbjct: 279 GITMLAGVLLAVRQTDMKLILAYTTITALGSLVFLLGSTHDLIIKAAVAFLLAHALYKAT 338 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 LF G++ + GTRD+ V G+ K MP T + ++AG+PP F + + A Sbjct: 339 LFMAVGDIKHQTGTRDIGKVRGLHKAMPITFMAVLVAGASMAGLPPLLGFYVKELVYGAS 398 Query: 414 LA---RNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLV 470 L +H+L I+ + + + + + + + P+ V ++ + ++ L Sbjct: 399 LVAPLASHILTIIAVFSNMIMAMLAFLLVLRPFWGEQKPKRVREANVNMSVNALLLASLT 458 Query: 471 MMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPS 514 ++L++ + +L+ A + +L L + + WH F PS Sbjct: 459 LLLSIFPFVIN--HTVLSPAVSAILR--RPLKTKLTLWHGFTPS 498 >UniRef50_C5A4P9 Membrane bound oxidoreductase, MbxH subunit (MbxH1) n=9 Tax=Thermococcaceae RepID=C5A4P9_THEGJ Length = 495 Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 107/453 (23%), Positives = 209/453 (46%), Gaps = 23/453 (5%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSL------GITLLLILALWVVQTAADAG 61 +LL+ PL+ + + + +L +L G + + G Sbjct: 7 SLLIAVPLISAFFVPLIKGFGKRTVKYYLMLVTLVQTAIAGAVFVNVYRTGEPMIVMAGG 66 Query: 62 EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 G+ L++ LF+ I+ ++ F ++S+ + E + Y F L Sbjct: 67 WKPPVGINLYVGPFAALFVLIVAIMSFFMAVFSLKAVETEP---------IDKYAMLFLL 117 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLF 181 + ++ + ++ ++ +E T++++ L + EA+ KY+++ +G +F L Sbjct: 118 LMLGSTGMIATGDIFNLFVFMEITSITAYALTAYNKTGEAAEASLKYMVLGGIGSSFFLI 177 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 G L+Y ++ + + + + ++PT+ + L+ G + LFP++AW Sbjct: 178 GVALIYGATGTLN--------MAHIAQLAGGINPTVAQIGLALLIFGLAVEAELFPLNAW 229 Query: 242 LPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 PDA+ AP P++A+ SA ++ L R I+ A G ++++I L+V VA Sbjct: 230 APDAYQAAPHPITAMFSAFVVKAGLYAAARLLYIMQNASGWGSVLKMVVIMAALTVFVAE 289 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 F L QRD+KR++AYSS+ +G++A L +G G+ A + H++NH++ K LLF G V Sbjct: 290 FSALRQRDVKRMIAYSSISQVGMIAFALALGTQAGVEAGVFHMINHAIVKALLFLAVGYV 349 Query: 362 LLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLI 421 + G + G+ + MP TA + G+LA G+P FNIF S+ + AG+ + Sbjct: 350 GITLGGTGIEKFSGLGRRMPLTAFVITVGSLAAVGIPLFNIFWSKIRILIAGVEAGYTWG 409 Query: 422 IVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR 454 + L+L + +R+ + + + Sbjct: 410 VALILGASVVEAVYYIRLIHTMWFGEGEGRIRE 442 >UniRef50_A2T411 NADH-ubiquinone oxidoreductase chain 5 n=7 Tax=Metazoa RepID=A2T411_9METZ Length = 678 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 108/428 (25%), Positives = 192/428 (44%), Gaps = 36/428 (8%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA----- 60 M+ L+L P + + + + + +G + L+ L DA Sbjct: 1 MYLLVLFLPFINAFFLGFFGRLIGTTGSGILSTICMGSSTLIAFFLAYEVLVNDAVVHIE 60 Query: 61 ------GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 EIF + L D L L ++ I L IYS YM + + Sbjct: 61 LYKWIESEIFITHIGLLFDTLSVTMLLVISSISTLVHIYSTSYMSDDPH--------VPR 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICT 173 + + LF F M+++VTS+N + ++ E + S LV + R + +AA K I++ Sbjct: 113 FICYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNR 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVL-------KQSSLLDPTLMLLAFVFLL 226 VG + G VL+Y S+ + +++ + + LL Sbjct: 173 VGDVGVILGMVLIYKTIGSLDFLTFNGGSIGSGIMDRGYSEGRANGAPLAPFAIIGILLL 232 Query: 227 IGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFP 285 IG K+ +H WLPDA E P+PVSAL+ A ++ + ++IR + + +A F Sbjct: 233 IGCIGKSAQLGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLMIRSFPLFEKA---PFT 288 Query: 286 NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 ++ IFG L+ AA LVQ D+K+++AYS+ +G + + +GI G + L H++ Sbjct: 289 LLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSQNV--GLFHLV 346 Query: 346 NHSLAKTLLFCGSGNVLLKY--GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 NH+ K LLF +G+V+ +D+ + G++ +PFT + G+ ++ G+P F Sbjct: 347 NHAFFKALLFLSAGSVIHSMTIDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGF 406 Query: 404 LSEFMTIT 411 S+ + + Sbjct: 407 YSKDLILE 414 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77437 Hydrogenase-4 component F n=52 Tax=Bacteria RepI... 429 e-118 UniRef50_B9XHI6 Proton-translocating NADH-quinone oxidoreductase... 401 e-110 UniRef50_UPI00003837CC COG1009: NADH:ubiquinone oxidoreductase s... 400 e-110 UniRef50_Q1IS54 Proton-translocating NADH-quinone oxidoreductase... 399 e-109 UniRef50_A6LXP7 Proton-translocating NADH-quinone oxidoreductase... 398 e-109 UniRef50_B5YKJ0 NADH-quinone oxidoreductase chain l n=1 Tax=Ther... 395 e-108 UniRef50_B0BZT2 Proton-translocating NAD(P)H-quinone oxidoreduct... 395 e-108 UniRef50_Q04YB3 NADH dehydrogenase (Ubiquinone), L chain n=7 Tax... 393 e-108 UniRef50_B3EIA1 Proton-translocating NADH-quinone oxidoreductase... 391 e-107 UniRef50_C0YTV8 NADH dehydrogenase I chain L n=1 Tax=Chryseobact... 391 e-107 UniRef50_B1WQD4 NADH dehydrogenase subunit 5 n=9 Tax=Cyanobacter... 390 e-107 UniRef50_A0AL63 Complete genome n=20 Tax=Bacillales RepID=A0AL63... 389 e-106 UniRef50_Q12ZH7 Na+/H+ antiporter subunit n=2 Tax=Methanosarcina... 389 e-106 UniRef50_A9EX64 NADH dehydrogenase (Ubiquinone) n=3 Tax=cellular... 388 e-106 UniRef50_B3QY40 Proton-translocating NADH-quinone oxidoreductase... 388 e-106 UniRef50_Q11VC3 NADH dehydrogenase I chain L n=5 Tax=Bacteroidet... 388 e-106 UniRef50_C0Z765 NADH-quinone oxidoreductase chain L n=2 Tax=Baci... 387 e-106 UniRef50_C7R7H2 Proton-translocating NADH-quinone oxidoreductase... 387 e-106 UniRef50_Q1RKE6 NADH-quinone oxidoreductase subunit L n=15 Tax=R... 387 e-106 UniRef50_B3QXL9 Proton-translocating NADH-quinone oxidoreductase... 386 e-105 UniRef50_Q1H3T5 NADH dehydrogenase (Quinone) n=12 Tax=Proteobact... 385 e-105 UniRef50_B5EN60 Proton-translocating NADH-quinone oxidoreductase... 385 e-105 UniRef50_Q02CT3 Proton-translocating NADH-quinone oxidoreductase... 385 e-105 UniRef50_A8LTG8 NADH dehydrogenase (Quinone) n=58 Tax=Proteobact... 384 e-105 UniRef50_D0D447 NADH-quinone oxidoreductase subunit l n=65 Tax=c... 384 e-105 UniRef50_Q9XAR5 NADH-quinone oxidoreductase subunit L n=38 Tax=A... 383 e-105 UniRef50_Q8M9U5 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 383 e-105 UniRef50_Q28T51 Proton-translocating NADH-quinone oxidoreductase... 382 e-104 UniRef50_Q2W3J5 NADH:ubiquinone oxidoreductase subunit 5 n=6 Tax... 381 e-104 UniRef50_D2QSX4 Proton-translocating NADH-quinone oxidoreductase... 380 e-104 UniRef50_Q32RH9 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 380 e-104 UniRef50_Q52978 Probable K(+)/H(+) antiporter subunit A/B n=110 ... 380 e-104 UniRef50_P31971 NAD(P)H-quinone oxidoreductase chain 5 n=25 Tax=... 380 e-104 UniRef50_B8FRJ9 Proton-translocating NADH-quinone oxidoreductase... 380 e-103 UniRef50_Q55429 NAD(P)H-quinone oxidoreductase chain 5 n=19 Tax=... 379 e-103 UniRef50_C1SM60 NADH dehydrogenase subunit L n=1 Tax=Denitrovibr... 379 e-103 UniRef50_B8J1C9 Proton-translocating NADH-quinone oxidoreductase... 379 e-103 UniRef50_Q49W91 Na(+)/H(+) antiporter subunit A1 n=19 Tax=Bacill... 379 e-103 UniRef50_B1KJV8 Proton-translocating NADH-quinone oxidoreductase... 377 e-103 UniRef50_C9RKX6 Proton-translocating NADH-quinone oxidoreductase... 376 e-103 UniRef50_A7GV43 Proton-translocating NADH-quinone oxidoreductase... 376 e-102 UniRef50_A1JTZ4 Hydrogenase-4 component F n=19 Tax=Bacteria RepI... 376 e-102 UniRef50_A5UVF8 Proton-translocating NADH-quinone oxidoreductase... 375 e-102 UniRef50_Q1IS43 Proton-translocating NADH-quinone oxidoreductase... 375 e-102 UniRef50_A3ERI6 NADH dehydrogenase (Quinone), chain L n=8 Tax=ce... 375 e-102 UniRef50_D0LZ05 Proton-translocating NADH-quinone oxidoreductase... 375 e-102 UniRef50_P50939 NADH-quinone oxidoreductase subunit L n=36 Tax=c... 374 e-102 UniRef50_C1F220 NADH dehydrogenase I, L subunit n=2 Tax=Bacteria... 374 e-102 UniRef50_B2IHV5 Proton-translocating NADH-quinone oxidoreductase... 373 e-102 UniRef50_Q1AVJ0 Proton-translocating NADH-quinone oxidoreductase... 373 e-101 UniRef50_A4E716 Putative uncharacterized protein n=1 Tax=Collins... 373 e-101 UniRef50_C5QQQ5 CPA3 family monovalent cation:proton (H+) antipo... 372 e-101 UniRef50_Q5FC98 NADH-quinone oxidoreductase chain L n=18 Tax=Ric... 371 e-101 UniRef50_C4V3R7 NADH dehydrogenase (Quinone) n=1 Tax=Selenomonas... 371 e-101 UniRef50_D2BHY2 NADH:quinone oxidoreductase subunit 5 (Chain L) ... 370 e-101 UniRef50_B9DJY9 Putative NADH dehydrogenase I chain L n=1 Tax=St... 370 e-101 UniRef50_C6VXR9 Proton-translocating NADH-quinone oxidoreductase... 370 e-101 UniRef50_Q3J3E6 NADH dehydrogenase I chain L n=72 Tax=cellular o... 370 e-101 UniRef50_Q3AH00 Proton-translocating NADH-quinone oxidoreductase... 370 e-101 UniRef50_C7MLM5 Formate hydrogenlyase subunit 3/multisubunit Na+... 369 e-100 UniRef50_A1ALQ0 Proton-translocating NADH-quinone oxidoreductase... 369 e-100 UniRef50_Q9RGZ5 Na(+)/H(+) antiporter subunit A n=9 Tax=Firmicut... 369 e-100 UniRef50_C6HUH6 NADH dehydrogenase (Quinone), chain L n=2 Tax=Ba... 369 e-100 UniRef50_A4GYW4 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 368 e-100 UniRef50_B2A3T0 NADH dehydrogenase (Quinone) n=2 Tax=Clostridia ... 367 e-100 UniRef50_Q67NV3 Na+/H+ antiporter subunit n=1 Tax=Symbiobacteriu... 367 e-100 UniRef50_B3PW10 NADH-ubiquinone oxidoreductase protein, chain L ... 367 e-100 UniRef50_C0JX69 Subunit 5 of NADH-plastoquinone oxidoreductase n... 367 e-100 UniRef50_B6YQ51 NADH dehydrogenase I subunit L n=32 Tax=Bacteroi... 367 e-100 UniRef50_Q8R9B0 Formate hydrogenlyase subunit 3/Multisubunit Na+... 367 e-100 UniRef50_A6TVL4 NADH dehydrogenase (Quinone) n=2 Tax=Alkaliphilu... 366 1e-99 UniRef50_C6D5D4 Proton-translocating NADH-quinone oxidoreductase... 365 2e-99 UniRef50_A6TVL5 NADH dehydrogenase (Quinone) n=1 Tax=Alkaliphilu... 365 2e-99 UniRef50_A9B6Y2 Proton-translocating NADH-quinone oxidoreductase... 365 2e-99 UniRef50_B0SZ37 Proton-translocating NADH-quinone oxidoreductase... 365 3e-99 UniRef50_Q2FZV1 Na(+)/H(+) antiporter subunit A1 n=72 Tax=Bacill... 365 3e-99 UniRef50_B3Q7M3 Proton-translocating NADH-quinone oxidoreductase... 365 3e-99 UniRef50_Q2S2L2 NADH dehydrogenase I, L subunit n=3 Tax=Rhodothe... 365 3e-99 UniRef50_B4SLF9 NADH dehydrogenase (Quinone) n=20 Tax=cellular o... 364 7e-99 UniRef50_A9F578 NADH dehydrogenase I chain M n=1 Tax=Sorangium c... 363 8e-99 UniRef50_P56752 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 363 9e-99 UniRef50_C5A2R1 Formate hydrogenlyase II subunit D (Mhy2D) n=1 T... 363 1e-98 UniRef50_C6W0W0 Proton-translocating NADH-quinone oxidoreductase... 363 1e-98 UniRef50_B2ULN9 Proton-translocating NADH-quinone oxidoreductase... 362 1e-98 UniRef50_A7HHY8 Proton-translocating NADH-quinone oxidoreductase... 362 2e-98 UniRef50_A1ZLY6 NAD(P)H-quinone oxidoreductase chain 5 (NAD(P)Hd... 362 2e-98 UniRef50_C5VLQ3 NADH dehydrogenase subunit 5 n=10 Tax=Bacteroida... 360 6e-98 UniRef50_B1NWJ6 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 360 8e-98 UniRef50_A5CFN9 NADH dehydrogenase I chain L n=2 Tax=Orientia ts... 360 1e-97 UniRef50_A9B485 Proton-translocating NADH-quinone oxidoreductase... 360 1e-97 UniRef50_Q34313 NADH-ubiquinone oxidoreductase chain 5 n=6 Tax=E... 359 1e-97 UniRef50_A1SE38 Proton-translocating NADH-quinone oxidoreductase... 359 2e-97 UniRef50_D0XMF8 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteo... 359 2e-97 UniRef50_Q85FH9 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 358 2e-97 UniRef50_Q1IS53 Proton-translocating NADH-quinone oxidoreductase... 358 3e-97 UniRef50_Q2YA95 Proton-translocating NADH-quinone oxidoreductase... 357 5e-97 UniRef50_Q1IZW2 NADH-quinone oxidoreductase, L subunit n=3 Tax=D... 357 7e-97 UniRef50_Q39QB8 NADH-plastoquinone oxidoreductase, chain 5 n=8 T... 357 7e-97 UniRef50_UPI0001C3127D proton-translocating NADH-quinone oxidore... 357 8e-97 UniRef50_Q35099 NADH-ubiquinone oxidoreductase chain 5 n=58 Tax=... 356 1e-96 UniRef50_P29388 NADH-ubiquinone oxidoreductase chain 5 n=133 Tax... 356 1e-96 UniRef50_B9ZEN4 Proton-translocating NADH-quinone oxidoreductase... 356 1e-96 UniRef50_C7JBM0 NADH-quinone oxidoreductase chain L n=8 Tax=Acet... 356 1e-96 UniRef50_Q9K1B0 NADH-quinone oxidoreductase subunit L n=127 Tax=... 356 1e-96 UniRef50_Q12ZH4 Na+/H+ antiporter subunit n=2 Tax=Methanosarcina... 355 2e-96 UniRef50_Q6GBK7 Putative antiporter subunit mnhA2 n=63 Tax=Staph... 355 2e-96 UniRef50_C4K6N0 NADH dehydrogenase I chain L, membrane subunit n... 355 3e-96 UniRef50_B2A694 NADH dehydrogenase (Quinone) n=1 Tax=Natranaerob... 355 3e-96 UniRef50_C4LLM4 Na(+)/H(+) antiporter subunit n=3 Tax=Corynebact... 355 3e-96 UniRef50_B3DZT2 NADH dehydrogenase subunit L n=2 Tax=Verrucomicr... 355 3e-96 UniRef50_C7M2U8 Proton-translocating NADH-quinone oxidoreductase... 354 4e-96 UniRef50_Q608Y7 NADH dehydrogenase I, L subunit n=2 Tax=Gammapro... 354 5e-96 UniRef50_C2FWK2 Possible NADH dehydrogenase (Quinone) n=2 Tax=Sp... 354 6e-96 UniRef50_C0WGQ4 CPA3 family monovalent cation:proton (H+) antipo... 353 8e-96 UniRef50_Q895D8 Sodium/proton antiporter shaA n=1 Tax=Clostridiu... 352 1e-95 UniRef50_C2BM70 CPA3 family monovalent cation:proton (H+) antipo... 352 1e-95 UniRef50_C7NIQ7 NADH:ubiquinone oxidoreductase subunit 5 (Chain ... 352 1e-95 UniRef50_B4RCL7 NADH dehydrogenase I, L subunit n=9 Tax=Proteoba... 352 2e-95 UniRef50_B6YWQ6 Hydrogenase 4, subunit 3 n=2 Tax=Thermococcus Re... 351 3e-95 UniRef50_Q9PMA7 NADH-quinone oxidoreductase subunit L n=43 Tax=E... 351 4e-95 UniRef50_B2V982 Proton-translocating NADH-quinone oxidoreductase... 350 8e-95 UniRef50_B8I2P6 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 350 8e-95 UniRef50_C6XJX2 Proton-translocating NADH-quinone oxidoreductase... 350 1e-94 UniRef50_C9RJK6 Proton-translocating NADH-quinone oxidoreductase... 349 1e-94 UniRef50_Q2C5U2 NADH-plastoquinone oxidoreductase, chain 5 n=2 T... 349 1e-94 UniRef50_D2RZ77 Proton-translocating NADH-quinone oxidoreductase... 349 2e-94 UniRef50_Q47T29 NADH dehydrogenase (Quinone) n=4 Tax=Actinomycet... 349 2e-94 UniRef50_A6DPK7 NADH-ubiquinone/plastoquinone family protein n=1... 349 2e-94 UniRef50_B0VE74 pH adaptation potassium efflux system transmembr... 348 2e-94 UniRef50_Q466B6 F420H2 dehydrogenase subunit L n=5 Tax=Methanosa... 348 3e-94 UniRef50_C2KMP0 NADH dehydrogenase (Quinone) n=2 Tax=Mobiluncus ... 348 3e-94 UniRef50_Q4UWA7 NADH-ubiquinone oxidoreductase NQO12 subunit n=5... 348 3e-94 UniRef50_C1ZFV1 NADH dehydrogenase subunit L n=1 Tax=Planctomyce... 348 4e-94 UniRef50_Q0C1D3 NADH-quinone oxidoreductase, L subunit n=4 Tax=c... 347 6e-94 UniRef50_A8ERK5 NADH-quinone oxidoreductase, L subunit n=1 Tax=A... 347 7e-94 UniRef50_Q2RXM0 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospiril... 347 7e-94 UniRef50_C1XJC0 NADH dehydrogenase subunit L n=2 Tax=Meiothermus... 347 8e-94 UniRef50_B2A693 Proton-translocating NADH-quinone oxidoreductase... 347 9e-94 UniRef50_C0A9K9 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae... 347 9e-94 UniRef50_C0GRM0 Proton-translocating NADH-quinone oxidoreductase... 346 1e-93 UniRef50_Q7NHD8 NADH dehydrogenase subunit 5 n=1 Tax=Gloeobacter... 346 1e-93 UniRef50_C1A8Y3 NADH-quinone oxidoreductase chain L n=1 Tax=Gemm... 346 2e-93 UniRef50_Q9HJK6 NADH dehydrogenase, chain L related protein n=6 ... 345 2e-93 UniRef50_C5NVG1 Na(+)/H(+) antiporter subunit A n=1 Tax=Gemella ... 345 3e-93 UniRef50_Q67KP4 NADH dehydrogenase I subunit L n=1 Tax=Symbiobac... 344 4e-93 UniRef50_A5UV30 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria Re... 344 5e-93 UniRef50_D1Y0I6 Putative NADH dehydrogenase subunit L n=1 Tax=Pr... 343 9e-93 UniRef50_Q0W2B8 Hydrogenase, membrane subunit 1-like protein (Ec... 343 1e-92 UniRef50_Q9I0J1 NADH-quinone oxidoreductase subunit L n=113 Tax=... 343 1e-92 UniRef50_B0SFU4 NADH dehydrogenase (Ubiquinone), M chain n=6 Tax... 343 1e-92 UniRef50_B3QY39 Proton-translocating NADH-quinone oxidoreductase... 343 1e-92 UniRef50_C5CEV1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 343 1e-92 UniRef50_B2SEW0 NADH dehydrogenase I, L subunit n=25 Tax=Proteob... 342 2e-92 UniRef50_B1ZRS2 Proton-translocating NADH-quinone oxidoreductase... 342 2e-92 UniRef50_D2QRI2 Proton-translocating NADH-quinone oxidoreductase... 342 3e-92 UniRef50_D2ILR8 NADH-ubiquinone oxidoreductase chain 5 n=3 Tax=C... 341 3e-92 UniRef50_UPI00005100B6 putative monovalent cation/H+ antiporter ... 341 3e-92 UniRef50_Q9UYP1 Hydrogenase 4, component F or formate hydrogen l... 341 4e-92 UniRef50_Q6MDQ5 Putative NADH-ubiquinone oxidoreductase chain L ... 341 4e-92 UniRef50_B6YTX9 Hydrogenase 4, component F or formate hydrogen l... 341 5e-92 UniRef50_C1AB28 NADH-quinone oxidoreductase chain L n=1 Tax=Gemm... 340 5e-92 UniRef50_UPI00016C46D7 NADH dehydrogenase I chain L n=1 Tax=Gemm... 340 8e-92 UniRef50_C0GDB1 NADH dehydrogenase (Quinone) n=2 Tax=Dethiobacte... 340 9e-92 UniRef50_Q28L00 NADH dehydrogenase (Quinone) n=1 Tax=Jannaschia ... 340 9e-92 UniRef50_A5GD02 Proton-translocating NADH-quinone oxidoreductase... 339 1e-91 UniRef50_C8W236 Hydrogenase, membrane subunit n=1 Tax=Desulfotom... 339 1e-91 UniRef50_C7NST6 NADH dehydrogenase (Quinone) n=4 Tax=Halobacteri... 338 2e-91 UniRef50_Q8HHD2 NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=C... 338 3e-91 UniRef50_P23482 Hydrogenase-4 component B n=69 Tax=Bacteria RepI... 338 3e-91 UniRef50_C8NJU8 NADH ubiquinone oxidoreductase subunit 5 (Chain ... 337 5e-91 UniRef50_A2T411 NADH-ubiquinone oxidoreductase chain 5 n=7 Tax=M... 337 5e-91 UniRef50_C0VMK3 NADH dehydrogenase I subunit L n=1 Tax=Acinetoba... 337 7e-91 UniRef50_Q24ST7 Hydrogenase-4 component F n=3 Tax=Desulfitobacte... 337 8e-91 UniRef50_Q609T5 Hydrogenase subunit n=1 Tax=Methylococcus capsul... 336 1e-90 UniRef50_C5C4D6 NADH dehydrogenase (Quinone) n=2 Tax=Micrococcin... 336 1e-90 UniRef50_B1VI36 pH adaptation potassium efflux system transmembr... 336 1e-90 UniRef50_A9B6Y1 Proton-translocating NADH-quinone oxidoreductase... 336 1e-90 UniRef50_D0LWA1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 336 2e-90 UniRef50_B9LUW7 NADH/Ubiquinone/plastoquinone (Complex I) n=13 T... 336 2e-90 UniRef50_D1C6X8 Proton-translocating NADH-quinone oxidoreductase... 335 2e-90 UniRef50_C6CN10 NADH/Ubiquinone/plastoquinone (Complex I) n=15 T... 335 2e-90 UniRef50_Q2S1W7 NADH dehydrogenase, putative n=1 Tax=Salinibacte... 335 2e-90 UniRef50_Q9RVZ0 NADH-ubiquinone/plastoquinone subunit, putative ... 335 2e-90 UniRef50_Q1QZ48 NADH dehydrogenase (Quinone) n=15 Tax=cellular o... 335 3e-90 UniRef50_A1RWL8 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum... 335 3e-90 UniRef50_Q02CT2 Proton-translocating NADH-quinone oxidoreductase... 335 3e-90 UniRef50_B6J444 Sodium/proton antiporter protein n=5 Tax=Coxiell... 335 4e-90 UniRef50_B0BZT1 Proton-translocating NAD(P)H-quinone oxidoreduct... 335 4e-90 UniRef50_D1A433 Proton-translocating NADH-quinone oxidoreductase... 334 4e-90 UniRef50_P05510 NADH-ubiquinone oxidoreductase chain 5 n=1247 Ta... 334 4e-90 UniRef50_C1YJ06 NADH:ubiquinone oxidoreductase subunit 5 (Chain ... 334 5e-90 UniRef50_B3QPF9 NADH dehydrogenase (Quinone) n=1 Tax=Chlorobacul... 334 6e-90 UniRef50_Q56227 NADH-quinone oxidoreductase subunit 12 n=3 Tax=T... 333 7e-90 UniRef50_C0QBF3 HyfB n=1 Tax=Desulfobacterium autotrophicum HRM2... 333 9e-90 UniRef50_B9L177 Nadh-quinone oxidoreductase chain m n=1 Tax=Ther... 333 9e-90 UniRef50_P50365 NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=A... 333 9e-90 UniRef50_A4XS82 NADH dehydrogenase (Quinone) n=1 Tax=Pseudomonas... 333 9e-90 UniRef50_D0LZ06 Proton-translocating NADH-quinone oxidoreductase... 333 1e-89 UniRef50_A0M796 Na(+)/H(+) antiporter subunit A n=5 Tax=Bacteroi... 332 2e-89 UniRef50_A0B819 F420H2 dehydrogenase subunit M n=2 Tax=Methanosa... 332 2e-89 UniRef50_Q0F380 NADH dehydrogenase subunit N n=1 Tax=Mariprofund... 332 2e-89 UniRef50_A9A3Z6 Proton-translocating NADH-quinone oxidoreductase... 332 3e-89 UniRef50_Q0W2B5 Hydrogenase, membrane subunit 4-like protein (Hy... 331 3e-89 UniRef50_A1WYN7 NADH dehydrogenase (Quinone) n=5 Tax=Gammaproteo... 331 3e-89 UniRef50_C0XU58 CPA3 family monovalent cation (K+ or Na+):proton... 331 4e-89 UniRef50_Q6L0I7 NADH-quinone oxidoreductase chain L n=1 Tax=Picr... 331 4e-89 UniRef50_B6YWP6 Hydrogenase 4, subunit 3 n=3 Tax=Thermococcus Re... 330 5e-89 UniRef50_A4SFL0 NADH dehydrogenase (Quinone) n=5 Tax=cellular or... 330 9e-89 UniRef50_B9LT20 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 330 1e-88 UniRef50_Q9UYN2 Hydrogenase 4, component B or formate hydrogen l... 329 1e-88 UniRef50_A5WG38 Proton-translocating NADH-quinone oxidoreductase... 329 1e-88 UniRef50_Q9ZZQ0 NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=C... 329 2e-88 UniRef50_C7MLM1 Formate hydrogenlyase subunit 3/multisubunit Na+... 329 2e-88 UniRef50_Q7UXC2 NADH dehydrogenase/oxidoreductase n=1 Tax=Rhodop... 329 2e-88 UniRef50_B2V8R6 NADH dehydrogenase (Quinone) n=1 Tax=Sulfurihydr... 329 2e-88 UniRef50_C0GJ30 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacte... 329 2e-88 UniRef50_Q1NQL7 Proton-translocating NADH-quinone oxidoreductase... 328 2e-88 UniRef50_C5C6P2 NADH:ubiquinone oxidoreductase subunit 5 (Chain ... 328 2e-88 UniRef50_Q6MGN7 NADH dehydrogenase I chain M n=3 Tax=Bacteria Re... 328 3e-88 UniRef50_D2R5F8 Proton-translocating NADH-quinone oxidoreductase... 328 3e-88 UniRef50_A0QQR3 NADH ubiquinone oxidoreductase subunit 5 n=9 Tax... 328 3e-88 UniRef50_B9L620 NAD(P)H-quinone oxidoreductase chain 5 (NAD(P)Hd... 328 3e-88 UniRef50_B6YTY8 Membrane bound hydrogenase, MbhH subunit n=9 Tax... 328 3e-88 UniRef50_Q3AB32 Carbon monoxide-induced hydrogenase, membrane an... 328 3e-88 UniRef50_B1I6I5 NADH-quinone oxidoreductase subunit N n=1 Tax=Ca... 328 3e-88 UniRef50_Q67P11 NADH dehydrogenase I subunit L n=1 Tax=Symbiobac... 328 4e-88 UniRef50_B4U8H9 Proton-translocating NADH-quinone oxidoreductase... 328 4e-88 UniRef50_C0A4J1 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae... 327 5e-88 UniRef50_B8DNI8 NADH dehydrogenase (Quinone) n=4 Tax=Desulfovibr... 327 7e-88 UniRef50_Q1PZK0 Similar to membrane-bound [NiFe]-hydrogenase-3, ... 327 7e-88 UniRef50_B1ZSE3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus te... 327 7e-88 UniRef50_A9A3Z7 Proton-translocating NADH-quinone oxidoreductase... 327 7e-88 UniRef50_A8H7R2 NADH dehydrogenase (Quinone) n=8 Tax=Proteobacte... 327 8e-88 UniRef50_Q2S2L1 NADH dehydrogenase i, m subunit n=7 Tax=Bacteria... 327 1e-87 UniRef50_A0RMD9 NADH-quinone oxidoreductase chain l n=2 Tax=Camp... 326 2e-87 UniRef50_Q6UVP8 NADH-ubiquinone oxidoreductase chain 5 n=33 Tax=... 326 2e-87 UniRef50_B0R3U9 NADH dehydrogenase-like complex subunit L n=9 Ta... 325 2e-87 UniRef50_A4X1Y8 Proton-translocating NADH-quinone oxidoreductase... 325 2e-87 UniRef50_C6BS86 Proton-translocating NADH-quinone oxidoreductase... 325 3e-87 UniRef50_Q2GF39 NADH dehydrogenase I, L subunit n=2 Tax=Neoricke... 324 5e-87 UniRef50_B1ZSD9 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria Re... 324 5e-87 UniRef50_A7ZBL2 Hydrogenase-4 component F n=6 Tax=Epsilonproteob... 324 6e-87 UniRef50_C9N684 Proton-translocating NADH-quinone oxidoreductase... 324 6e-87 UniRef50_B6AS28 NADH dehydrogenase (Quinone) n=3 Tax=Leptospiril... 323 7e-87 UniRef50_Q11RU6 NADH dehydrogenase I chain L n=1 Tax=Cytophaga h... 323 7e-87 UniRef50_C4ZJD8 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 323 8e-87 UniRef50_C3PH86 pH adaptation potassium efflux system transmembr... 323 8e-87 UniRef50_C9N9J1 NADH dehydrogenase (Quinone) n=12 Tax=Streptomyc... 323 9e-87 UniRef50_A7JYE5 Na(+) H(+) antiporter subunit D n=3 Tax=Vibrio R... 323 1e-86 UniRef50_C7MG69 NADH:ubiquinone oxidoreductase subunit 5 (Chain ... 323 1e-86 Sequences not found previously or not previously below threshold: >UniRef50_P77437 Hydrogenase-4 component F n=52 Tax=Bacteria RepID=HYFF_ECOLI Length = 526 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 526/526 (100%), Positives = 526/526 (100%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA Sbjct: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH Sbjct: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL Sbjct: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA Sbjct: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA Sbjct: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN Sbjct: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 Query: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL Sbjct: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 Query: 421 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIP 480 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIP Sbjct: 421 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIP 480 Query: 481 QPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEKHSER 526 QPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEKHSER Sbjct: 481 QPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEKHSER 526 >UniRef50_B9XHI6 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Verrucomicrobia RepID=B9XHI6_9BACT Length = 636 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 117/488 (23%), Positives = 214/488 (43%), Gaps = 36/488 (7%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA-- 65 L+L PL+ L + + + + + L+ ++ + F Sbjct: 11 WLILFLPLVSVALISLIPGIKSRPRVSAQISIAAVVVCFLLTSILYFVLQNSGQQQFPQI 70 Query: 66 -----------AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 + L +D L + + I+ +G L I+S YM+ + + Sbjct: 71 TATWLQVDYLRIDIGLKLDALSMMMMLIVTGVGGLIHIFSWEYMKGDPGY--------SR 122 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICT 173 Y+ LF+F+ML +V ++N ++M+ E +SS L+G + +R + +A K + Sbjct: 123 YFACLSLFIFSMLGIVMADNFLMMFIFWELVGISSYLLIGFWYERPSAADACKKAFLTNR 182 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 +G L G +LV+A + + + + +L + A + + G K+ Sbjct: 183 LGDFGFLVGILLVWATLGHRLNFDALKQYLD----KHTLEFAGVATAAGLLVFCGAAGKS 238 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 FP+H WLPDA E P+PVSAL+ A ++ + +L R Y ++ + ++ Sbjct: 239 AQFPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYMLCRIYFLL--DVSGSHALEVIAWI 295 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G ++ +AA + Q DIKR+LAYS++ +G + + +G GP A+ H+ H+ K Sbjct: 296 GGITALLAAVIAIQQNDIKRILAYSTLSQLGYMVMAVGTHGP---TPAMFHLTTHAFFKA 352 Query: 353 LLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 LLF G+G V+ + +++ + + K MP T V F G LALAG PP + F S+ + Sbjct: 353 LLFLGAGAVIHAVHHEQNIWKMGALRKKMPTTFVTFTIGTLALAGCPPLSGFYSKDGILG 412 Query: 412 AGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV--NRGDLGWLTTSPMVILL 469 + +H + +L LL L + R+ P + + + P++IL Sbjct: 413 QAMETHHYGLFILGLLAAILTTFYMFRLVFVAFYGAPRSEAADHAHEAPGMLKWPLIILA 472 Query: 470 VMMLAMGT 477 V G Sbjct: 473 VFSFIGGV 480 >UniRef50_UPI00003837CC COG1009: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003837CC Length = 758 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 140/537 (26%), Positives = 241/537 (44%), Gaps = 36/537 (6%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAA-- 58 MS + + A + P L S+L A R + + L +L ++ + + Sbjct: 1 MSSNTLLAAAAILPFLGSVLAGALPSRARNVAAALAGLVTLTSLGCILALTPQLAGGSSV 60 Query: 59 ----DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 D L +DGL LF ++ IG L +Y+ YM + Sbjct: 61 VHAIDWLPSLGVRFVLRLDGLAWLFSVLVLAIGALVVLYARYYMS--------PADPVPR 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICT 173 + +F F+ ML ++ S NLI + E T++ S L+G + ++ A + I Sbjct: 113 LFAYFLAFVGAMLGIILSGNLIQLVLFWELTSIVSFLLIGYWYDNAAARDGARMSLTITA 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 G L GT+L+ S + +A ++ + +L L A V +L G TK+ Sbjct: 173 AGGLCLLVGTILIGRIVGSYDLETVLA-------SGDTIRNSSLYLPALVLVLAGALTKS 225 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 FP H WLP A + AP+P+SA L A ++ + ++IR + ++ G+D ++ Sbjct: 226 AQFPFHIWLPRAMA-APTPISAYLHSATMVKAGIFLMIRLWPVL---AGTDAWYWIVGTI 281 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 GM ++ + ++ + Q D+K LLAYS++ ++GL+ + LG+ PL + AA+ H +NH+ K Sbjct: 282 GMATMLIGSWSAIFQHDLKGLLAYSTISHLGLITLLLGLDSPLAVVAAIFHTVNHATFKA 341 Query: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LF G + + GTRD+ + G+ + MP+TA L A A+AG+P N FLS+ M ++ Sbjct: 342 SLFMAVGIIDHETGTRDMRRLSGLWRAMPYTATLAMVAAAAMAGVPLLNGFLSKEMFLSE 401 Query: 413 GLARN-----HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA--VNRGDLGWLTTSPM 465 + HL + VL L + +R + +PP + P+ Sbjct: 402 AVDNMGDHPIHLALPVLATLASAFTMLYSLRFIRQTFFGRPPHDLPEEPHEPVRWMRIPI 461 Query: 466 VILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDF-LPSGTASVSE 521 +L++ +A+G + L A VL G P + WH F P + V+ Sbjct: 462 EMLVLTCIAIGLVPNLTIGPALGRAVRAVL-GDATPPYSLAIWHGFNAPLAMSVVAM 517 >UniRef50_Q1IS54 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Acidobacteria RepID=Q1IS54_ACIBL Length = 710 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 130/521 (24%), Positives = 213/521 (40%), Gaps = 62/521 (11%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRR-----LSATRTVTVLHSLGITLLLILALWVVQ 55 M + L+ L P L + F ++ + V + L LA++ Sbjct: 1 MFFLEHIWLIPLFPALGAATMFFFGRKLDDEHDKKWVNGICVGAIVLTFLWSCLAVFQYT 60 Query: 56 TAAD----------------------------AGEIFAAGLWLHIDGLGGLFLAILGVIG 87 A A F A +D L ++L + +G Sbjct: 61 QYAAVDHKPFEKVVYTWLGSNTGLMTFKTASGATAEFKAEAGFLLDPLSSIWLLFVTGVG 120 Query: 88 FLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTL 147 L IYS GYM+H+ + ++G+ +LF+F+ML ++ NN +M+ E L Sbjct: 121 MLIHIYSTGYMKHDGGYY--------RFFGYLNLFMFSMLTLILGNNYAMMFVGWEGVGL 172 Query: 148 SSAFLVGIYGQRSSLE-AAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEV 206 S L+G Y + S AA K I +G A L G + S+ S + Sbjct: 173 CSYLLIGFYFHKKSASTAANKAFITNRIGDAGVLVGMFTIAWYFGSINFTKVTQAARSGI 232 Query: 207 LKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCA 265 + A + L IG K+ P++ WLPDA E P+PVSAL+ A ++ Sbjct: 233 FHTGDY----WITFATIALFIGACGKSAQLPLYVWLPDAM-EGPTPVSALIHAATMVTAG 287 Query: 266 LLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLV 325 + ++ R + A S +++ I G L+ AA LVQ DIKR+LAYS+V +G + Sbjct: 288 VYMVARSNALYILAPNS---MKVVAIVGALTAVFAASIGLVQNDIKRVLAYSTVSQLGYM 344 Query: 326 AVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTA 384 + LG+G A + H+ H+ K LLF GSG+V+ G +D+ + + K +P T Sbjct: 345 FLALGLG---AFTAGVFHVFTHAFFKALLFLGSGSVIHAMSGEQDMRFMGALRKKIPVTF 401 Query: 385 VLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL---LIIVLLLLLLTLVLAGLVRMAA 441 G LA+AG+PP F S+ + + N ++ + L + + R+ Sbjct: 402 WTMFAGTLAIAGIPPLAGFFSKDEILWQAWSSNGGTFRVLWGIGFLTALMTSLYMFRLVY 461 Query: 442 RVLMAKPP----QAVNRGDLGWLTTSPMVILLVMMLAMGTH 478 +P + + T P+VIL + + G Sbjct: 462 LTFFGQPRMSHEVEHHVHESPKSMTGPLVILAICAVFAGFL 502 >UniRef50_A6LXP7 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=cellular organisms RepID=A6LXP7_CLOB8 Length = 617 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 117/491 (23%), Positives = 219/491 (44%), Gaps = 36/491 (7%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M + + ++ + P + L+ K+ + + + + + + + V T+ + Sbjct: 1 MRFIDLAWMIPVFPAIAFLIIGFITKKSKVISSAIAIGGMVLSFIFSLGVFYEVITSKVS 60 Query: 61 ------------GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 + + ID L L I+ IG L IYS+GYM+ E Sbjct: 61 INKPVEYAVSWLSAPIKIEVGVLIDPLTATMLIIVTFIGLLVEIYSLGYMKGEKG----- 115 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWK 167 ++ LF +ML +V SNN M+ E L S L+G Y R +++A K Sbjct: 116 ---FSRFFANLSLFTSSMLGLVISNNYFQMFFFWELVGLCSYLLIGFYYDRPSAVKANKK 172 Query: 168 YIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLI 227 + VG L G + ++ + + A + D + + + + Sbjct: 173 AFVANRVGDFGFLVGMLCLFMAFGTFNFRELAASI-------PAYQDVVYLTIIALLIFA 225 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPN 286 G K+ FP+H WLPDA E P+PVSAL+ A ++ + +L R YI+ + Sbjct: 226 GPVAKSAQFPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYLLARGYILF---SSLHEVS 281 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 ++ G ++ +A +VQRD+KR+LA+S++ +G + + +G+G G + + H+ + Sbjct: 282 LVIAYIGGITAFMAGTIAIVQRDLKRILAFSTMSQLGYMVMAMGVG---GFTSGMFHLTS 338 Query: 347 HSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 H+ K LLF G+G+++ G +D+ + G++K M ++ F +L+LAG+PP + F S+ Sbjct: 339 HAFFKALLFLGAGSIIHSIGVQDIFKMGGLIKKMKLVSITFIIASLSLAGIPPLSGFFSK 398 Query: 407 FMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMV 466 +T ++ + L L+ L + R+ V + + + W T P++ Sbjct: 399 DEILTVTYEHGYIFLYYLGLITAFLTAFYMARLVLIVFFGEEREKHSVHKTPWCMTVPLI 458 Query: 467 ILLVMMLAMGT 477 IL V + G Sbjct: 459 ILSVFSVFYGF 469 >UniRef50_B5YKJ0 NADH-quinone oxidoreductase chain l n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKJ0_THEYD Length = 630 Score = 395 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 128/538 (23%), Positives = 227/538 (42%), Gaps = 38/538 (7%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKR-RLSATRTVTVLHSLGITLLLILALWVVQTA---- 57 + L+LL PL L + VL LG ++ + A+ V + Sbjct: 1 MEKYYILILLFPLAGFLFNILIGRFISPKVVSWAGVLSILGSLVVALFAIAQVFSGKTIE 60 Query: 58 -----ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 + ID L + L ++ +G+L IYS+GYM + + Sbjct: 61 YNIYTWILSDDLKVSFGYLIDQLTAVMLFVVCFVGWLIHIYSVGYMHGDPGY-------- 112 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIII 171 Y+ + +LF+F+ML++V NNL++++ EA L S FL+G + + + +A K I+ Sbjct: 113 PRYFAYLNLFVFSMLMLVMGNNLVMLYFGWEAVGLCSYFLIGFWYHKKTASDAGKKAFIV 172 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPT--LMLLAFVFLLIGF 229 +G G L++ N ++ ++ L+ L + L G Sbjct: 173 NRIGDFGFALGIFLLFINVYALNYTDIFPKIPGLQGHTLNIFGWNIDLITLIALLLFCGA 232 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRL 288 K+ P+H WLPDA E P+PVSAL+ A ++ + ++ R I S+ + Sbjct: 233 VGKSAQIPLHVWLPDAM-EGPTPVSALIHAATMVTAGVFMVARLNPIYG---MSEIALAV 288 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 + I G ++ AA LVQRD+KR++AYS++ +G + + G+ A + H+ H+ Sbjct: 289 VAITGAVTSFFAATIALVQRDMKRIIAYSTISQIGYMFIGCGMA---AYGAGIFHLYTHA 345 Query: 349 LAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 K LLF G+G+V+ G D+ + G+ K MP T + F +L +AG+P F+ F S+ Sbjct: 346 FFKALLFMGAGSVMHAMAGELDIYKMGGLRKKMPITYITFLIASLTIAGIPGFSGFFSKD 405 Query: 408 MTITAGLARNHL---LIIVLLLLLLTLVLAGLVRMAARVLMAK----PPQAVNRGDLGWL 460 + A A I +L + L R+ K P + + + + Sbjct: 406 EILWAAFASAKPYGKFIWLLGTITAALTAFYTFRILFVAFHGKFRGTPEEFKHVHESPPI 465 Query: 461 TTSPMVILLVMMLAMGTH-IPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTA 517 T P+++L + + +G IP + ++ + S A Sbjct: 466 MTVPLIVLAIGSVIVGYFSIPHFLEPVIPKPVFAAPHEQERVVMTMSIIAGVTGILIA 523 >UniRef50_B0BZT2 Proton-translocating NAD(P)H-quinone oxidoreductase, chain L n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0BZT2_ACAM1 Length = 671 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 117/497 (23%), Positives = 213/497 (42%), Gaps = 35/497 (7%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAA---- 58 + L+ L PL+ + R S + ++VL S+ + + + A WVV Sbjct: 1 MTDFAYLIPLFPLIAFAVNLFFGHRLGSFSGWISVLTSVASSAIALPAAWVVAQGGQYSH 60 Query: 59 DAGEI----FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 + + + +D L L ++ VIG L +YSIGYM E + Sbjct: 61 EWLWLTLGNYDLNFGYLLDPLSATLLFVVTVIGTLIQVYSIGYMHGEKYYH--------R 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICT 173 ++ + LF+ ML +V +NN + + A E L S L+G Y + + A+ K + Sbjct: 113 FFAYVSLFMAAMLTLVIANNYVQYFMAWEVMGLCSYLLIGFYFHKDSAANASRKAFLTTR 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 VG G + ++ ++ + L+ LA + G K+ Sbjct: 173 VGDVGLFLGIMTLFVTGGTLSFVDL---------PNAVETGAPLLWLAAPLIFCGTVGKS 223 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 FP+H WLPDA E P+PVSAL+ A ++ + ++ R +++ ++ Sbjct: 224 AQFPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYLVARSFVLFT---SFPMVMPWVMGI 279 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G L+ +AA+ L DIK++LA+S++ +G + +G+G G+ A H++ H+ K Sbjct: 280 GTLTAFMAAYIALTATDIKKVLAFSTISQLGYMVTAMGLG---GMTAGTFHLMTHAFFKA 336 Query: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LLF G+G+V+ +D+ + G+ M T F +LA+AG+PP + F S+ + Sbjct: 337 LLFLGAGSVIHGAHEQDIRQLGGLFSKMKHTGATFVIASLAIAGVPPLSGFWSKDEILLE 396 Query: 413 GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV-NRGDLGWLTTSPMVILLVM 471 H ++ +LLL + + R+ K + + L T P+ L + Sbjct: 397 AYQEGHFVVYGVLLLTAFMTAFYMFRLVFMTFFGKARNPEIHAHESPALMTVPLWCLAIG 456 Query: 472 MLAMGTHIPQPVIRILA 488 + +G + Sbjct: 457 AIFVGIPGSPFMDNWFQ 473 >UniRef50_Q04YB3 NADH dehydrogenase (Ubiquinone), L chain n=7 Tax=Bacteria RepID=Q04YB3_LEPBL Length = 648 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 126/497 (25%), Positives = 212/497 (42%), Gaps = 41/497 (8%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVV------ 54 M + + L+ PL+ L+ K T + L +++ + Sbjct: 1 MEIANLIPALVALPLIGFLISGLFGKWLKGFTGIFSTGVVFLSFGLALVSFVLFHPMERT 60 Query: 55 --QTAADAGEIFAAGL----WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 + A I G+ +D L I+ IG L +YSIGYM+ + Sbjct: 61 IPEIVAVLPWIETGGIQVSLAYQVDQLSLYMTLIITGIGSLIHLYSIGYMKDDPG----- 115 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWK 167 Y+ + +LF+F ML +V + NLI+++ E L S L+G + + A K Sbjct: 116 ---FARYFAYLNLFIFAMLNLVLAENLILLFLGWEGVGLCSYLLIGFDYHKESAANAGMK 172 Query: 168 YIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLI 227 I+ +G L G LV+ SV + ++ + V I Sbjct: 173 AFIVNRIGDLGMLLGIALVFWYTGSVSFTTIEGAILEIPSFR------YILPVTAVCFFI 226 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPN 286 G K+ P+H WLPDA + P+PVSAL+ A ++ + ++ R I A Sbjct: 227 GAIGKSAQLPLHVWLPDAMA-GPTPVSALIHAATMVTAGVFLIARLNPIFLSAPQ---VG 282 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 +++ G ++ AA L Q DIK++LAYS+V +G + V +G G A L H++ Sbjct: 283 HWIVVIGSMTAFFAATIGLFQNDIKKVLAYSTVSQLGYMFVAMGAG---AYVAGLFHLMT 339 Query: 347 HSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 H+ K LLF GSG+V+ + +DL + G+ K M T + F G+LA++G+PPF+ F S Sbjct: 340 HAFFKALLFLGSGSVIYALHHEQDLRNMGGLKKRMKITWITFLVGSLAISGIPPFSGFFS 399 Query: 406 EFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLGWLT 461 + + + L L ++ L + RM + +A++ + + Sbjct: 400 KDLILEKSYTYGA-LFYGLGIITALLTAFYMFRMTYLAFYGESRVSSDKALHLHESPLVM 458 Query: 462 TSPMVILLVMMLAMGTH 478 T P+VIL + G Sbjct: 459 TIPLVILSIGATVTGFL 475 >UniRef50_B3EIA1 Proton-translocating NADH-quinone oxidoreductase, chain L n=27 Tax=cellular organisms RepID=B3EIA1_CHLL2 Length = 770 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 126/535 (23%), Positives = 217/535 (40%), Gaps = 77/535 (14%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAA------- 58 + +LL PLL ++ KR + V L + W V A Sbjct: 7 LSIAVLLLPLLSFVILIFFNKRLPRRGDFIGVGILGTTFALSLYIFWSVVVQAYDPAFRV 66 Query: 59 ------------DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGE 106 + + ID L + LA++ +I FL +YS GYM + +G Sbjct: 67 AWDFTWIDLGNVPGVGPLVIKMGIVIDNLTAIMLAMVTLISFLVHLYSTGYMAGDPRYG- 125 Query: 107 LSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAA 165 ++ + +F F+ML +V S+NL ++ E LSS L+G Y ++ + +A Sbjct: 126 -------RFFAYLGIFTFSMLGIVLSDNLFAIYIFWELVGLSSYLLIGFYFEKDSAADAQ 178 Query: 166 WKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFL 225 K + VG G +++Y+ + Q A + + + A + L Sbjct: 179 KKAFLANRVGDIGMWLGILILYSQFHTFSYQEIFA----NLAAGKFGMSQAWLTAAGILL 234 Query: 226 LIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDF 284 +G K+ FP+H WLPDA E P+PVSAL+ A ++ + + R ++++ Sbjct: 235 FMGCVGKSAQFPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYFVARIFVLLTAD----- 288 Query: 285 PNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHI 344 ++ G + +AA + Q DIKR+LAYS+V +G + + LG+G AAL H+ Sbjct: 289 ALHVIAFIGAFTAFMAATIAITQHDIKRVLAYSTVSQLGYMVLGLGVG---AYSAALFHL 345 Query: 345 LNHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 + H+ K LF GSG ++ +D+ + G+ K MP+T F LALAG+P + F Sbjct: 346 VTHAFFKACLFLGSGAIIHAMHHEQDMRWMGGLRKNMPWTFATFTLATLALAGLPLTSGF 405 Query: 404 LSEFMTITAGLARN-------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR-- 454 +S+ + + + LI L L + R V + + Sbjct: 406 MSKDAILAGAIGFANAEGGGIYYLIPFLGFFSAMLTAFYMGRQIWLVFFGESRTHLKPAD 465 Query: 455 ------------------------GDLGWLTTSPMVILLVMMLAMGTHIPQPVIR 485 ++ W +P+VIL + + + P P+ Sbjct: 466 DHHHGHDAHAAHGHDDHHEEAHGVHEVAWNMRTPLVILAALSI-FAVYSPDPLDG 519 >UniRef50_C0YTV8 NADH dehydrogenase I chain L n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YTV8_9FLAO Length = 637 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 118/493 (23%), Positives = 220/493 (44%), Gaps = 40/493 (8%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 + ++L PLL L+ K + + + ++L++ + Sbjct: 1 MENLVYAIVLLPLLGFLINGLFGKNLPKILVGSLATAVVFGSFCIAVSLFMNFNSESQPV 60 Query: 63 IF-----------AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 I ID L + + I+ IG L +YSIGYM H+ + Sbjct: 61 IVKAFEWFRVNGVQINFGFQIDQLSLMMVMIITGIGSLIHLYSIGYMSHDKGFYK----- 115 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYII 170 ++ + +LF+F+MLL+V +N ++++ E L S L+G + +AA K I Sbjct: 116 ---FFTYLNLFIFSMLLLVMGSNYLILFIGWEGVGLCSYLLIGFWYTNEEYGKAARKAFI 172 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 + +G L G ++ + +V + LD T+++ L IG Sbjct: 173 MNRIGDLALLIGIFMIASQTNAVDYLSVAEN------ASKFELDGTVIIFITASLFIGAT 226 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ P++ WLPDA + P+PVSAL+ A ++ + +++R + + ++ Sbjct: 227 GKSAQVPLYTWLPDAMA-GPTPVSALIHAATMVTAGIYLVVRSNFLFT---LAPTVQGVI 282 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 L G L+ A+A F+ L Q DIK++LAYS+V +G + + LG+G A+ H++ H+ Sbjct: 283 LFIGFLTAALAGFYALRQNDIKKVLAYSTVSQLGFMFIALGLG---AYTTAMFHVMTHAF 339 Query: 350 AKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 K LLF G+G+V+ +D+ + G+ K +P T F G LA++G P + +S+ Sbjct: 340 FKALLFLGAGSVIHAMSNEQDMRFMGGLKKYIPLTHATFLIGTLAISGFPLLSGMISKDE 399 Query: 409 TITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK----PPQAVNRGDLGWLTTSP 464 + A A+N + ++L +L + R+ + Q + + T P Sbjct: 400 ILVAAFAKNPVYWVILFVLAAI-TATYMFRLYYLTFHGEFRGTEEQKHHLHESPSNMTLP 458 Query: 465 MVILLVMMLAMGT 477 +++L V+ + G Sbjct: 459 LIVLAVLSVIGGF 471 >UniRef50_B1WQD4 NADH dehydrogenase subunit 5 n=9 Tax=Cyanobacteria RepID=B1WQD4_CYAA5 Length = 682 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 119/539 (22%), Positives = 207/539 (38%), Gaps = 86/539 (15%) Query: 8 ALLLLTPLLFSLLCFAC--------RKRRLSATRTVTVLHSLGITLLLILALWVVQTA-- 57 L+ + PLL +++ + R + + L + L L +Q Sbjct: 9 WLIPVLPLLGAMVVGLGLISFNQVTNRLRQANAVFIISLLGASMVLSFALLWSQIQGHET 68 Query: 58 ------ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 A F + +D L L I+ + FL +Y+ GYM H+ + Sbjct: 69 YTRMIEWAAAGNFHLQMGYTLDHLSALMCVIVTTVAFLVMVYTDGYMAHDPGY------- 121 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYII 170 +Y + +F +ML +V S NL+ ++ E + S L+G + R + A K + Sbjct: 122 -VRFYAYLSIFSASMLGLVISPNLVQVYIFWELVGMCSYLLIGFWFDRKAAADACQKAFV 180 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 VG L G + +Y + E L S ++ P L L V + +G Sbjct: 181 TNRVGDFGLLLGMLGIYWATGTFEFDLMGERL--ESLVSSGMIAPALAGLFAVLVFLGPV 238 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ FP+H WLPDA E P+P+SAL+ A ++ + ++ R Y + ++ Sbjct: 239 AKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARMYPVFEPI---PTAMTII 294 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 G ++ + A L Q DIK+ LAYS++ +G + + +GIG A L H++ H+ Sbjct: 295 AWTGAVTSFLGATIALTQNDIKKGLAYSTISQLGYMVMAMGIG---AYTAGLFHLMTHAY 351 Query: 350 AKTLLFCGSGNVLLKYG---------TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 K +LF SG+V+ +D+ ++ G+ K MP T++ F G LA+ G+PPF Sbjct: 352 FKAMLFLCSGSVIHGMEGVVGHDPVLAQDMRLMGGLRKYMPLTSLAFLVGTLAICGIPPF 411 Query: 401 NIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----------- 449 F S+ + N L ++ L + RM Sbjct: 412 AGFWSKDEILGLAFEANPALW-LVGWFTAGLTAFYMFRMYFMTFEGDFRGNDMDIRNELS 470 Query: 450 ------------------------------QAVNRGDLGWLTTSPMVILLVMMLAMGTH 478 + + + T P++IL + +G Sbjct: 471 MAAAPVFGPGAMDVKELDHDTEDHGHDDHGHSDSPHESPLTMTLPLLILAIPSTVIGLL 529 >UniRef50_A0AL63 Complete genome n=20 Tax=Bacillales RepID=A0AL63_LISW6 Length = 802 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 141/550 (25%), Positives = 233/550 (42%), Gaps = 53/550 (9%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWV----VQTAADAGE 62 L +L P + +LL + VL I + L T Sbjct: 4 LHLAILLPFIVALLIPLFYRWTKQVHTGWLVLPIPVILFIYFLTFIPKTMHEATIVSMPW 63 Query: 63 IFAAGLWL--HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 I G+ +DGL LF ++ IG L YSI Y+ + L ++Y F Sbjct: 64 IPRLGINFTVVVDGLSLLFALLITGIGSLVTFYSIYYLGKKKE-------RLSNFYTFLF 116 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFG 179 +F+ ML VV S+NLIV++ E T++SS L+G + R S A K ++I G Sbjct: 117 MFMTAMLGVVLSDNLIVLYLFWELTSISSFLLIGYWYHRERSRYGARKSMMITVFGGLMM 176 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L G +L++ + S +A + +L + A + +L+G TK+ P H Sbjct: 177 LGGFILLHIMSDSFSIRAIIQNADIISHN-------SLFIPAMILVLLGAFTKSAQVPFH 229 Query: 240 AWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 WLPDA EAP+PVSA L A ++ + ++ R+ + S + + G+ ++ Sbjct: 230 IWLPDAM-EAPTPVSAYLHSATMVKAGIYIVARFTPLF---ASSGVWFWTVSLVGITTLF 285 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGP-------------LGIFAALLHIL 345 + + D+K +LAYS++ +G++ LG+G + I AA+ H+ Sbjct: 286 WGSLNATKKNDLKAILAYSTISQLGMIMALLGVGAASLHFDTLSDDIYVMAIVAAVFHLF 345 Query: 346 NHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 NH+ K LF G V + GTRD+ + G+++IMP TA + G A+AG+PPFN FLS Sbjct: 346 NHATFKGSLFMMVGIVDHETGTRDIRRLGGLMRIMPITATIAFIGTFAMAGIPPFNGFLS 405 Query: 406 EFMTITAGLARNHL----------LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ---AV 452 + M + + HL L+ V+ + + + + K Sbjct: 406 KEMFFESMINITHLQLFDASTWGILLPVVAWVASVFTFVYSMIIFFKTFTGKVKPFLLPK 465 Query: 453 NRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSG-THDLPAQRSTWHDF 511 + + P +IL + ++ +G IL A ++ G D S WH F Sbjct: 466 KPHEAPFGLLLPPIILSIFVVLIGLFPNLIAKPILEPAVRAIVPGLATDFSIHISLWHGF 525 Query: 512 LPSGTASVSE 521 P+ + Sbjct: 526 TPALLMTFGV 535 >UniRef50_Q12ZH7 Na+/H+ antiporter subunit n=2 Tax=Methanosarcinaceae RepID=Q12ZH7_METBU Length = 788 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 127/541 (23%), Positives = 227/541 (41%), Gaps = 40/541 (7%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHS------LGITLLLILALWVV 54 M + + P +F+ L K + +G+ ++ ++ Sbjct: 1 MDSFNAITVAIFLPFIFAGLVPVMEKLLKQRVGWFAAATALASFALIGMAATEVIEGQII 60 Query: 55 QTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 Q + ++ DGL + I IG L YS GYM L Sbjct: 61 QGSISWIPSAGVNFTIYADGLATMIGFIASGIGVLIMSYSNGYMSR--------TEDLTR 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICT 173 YY + LF+ +M+ +V S N I ++ E T+++S L+G + + S+ A K +++ Sbjct: 113 YYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHKPESIYGATKSLLLTA 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 G L G +L+ S A + + +++ + L L+ + +LIG K+ Sbjct: 173 SGGLAMLAGFLLLGNITGSFELAAILN----DPQVINAIKEHELFLITLILILIGAAAKS 228 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 P + WLP+A EAP+PVSA L A ++ + ++ R + I G++ L+ Sbjct: 229 AQGPFYIWLPNAM-EAPTPVSAFLHSATMVKAGIYLVARIHPIF---SGTEAWFILVSGT 284 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGG----PLGIFAALLHILNHS 348 G++++ VA F Q DIK +LAYS++ + + G +G+ AA H+LNH+ Sbjct: 285 GIITMLVAGFLAFRQTDIKGILAYSTISQLAYMMTMYGYTTHHEPGIGVAAATFHLLNHA 344 Query: 349 LAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 K LF +G V + TRD+ + G+ + MP T ++ LA+AG+PP N FLS+ M Sbjct: 345 AFKACLFLVAGIVAHEAATRDIRKLGGLRREMPITFIIACIAGLAMAGIPPLNGFLSKEM 404 Query: 409 TITAGLARNH-------LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ---AVNRGDLG 458 + + LI +L A +++ + + + + + + Sbjct: 405 FYESSIEMGASIGGIFTFLIPAFAVLGGVFTFAYSIKLIDGIFLGERDKNAIPHHIHEPP 464 Query: 459 WLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTAS 518 P L +++ G P I+ A + +L T L WH F S + Sbjct: 465 MTMLIPPAFLAFLVILFGVIPSLPTHYIIEPAVSGILLETAHL--HVKLWHGFTASLMMT 522 Query: 519 V 519 + Sbjct: 523 I 523 >UniRef50_A9EX64 NADH dehydrogenase (Ubiquinone) n=3 Tax=cellular organisms RepID=A9EX64_SORC5 Length = 854 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 110/581 (18%), Positives = 219/581 (37%), Gaps = 110/581 (18%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA----- 60 + A++L P L + + KR + L +LG L + +++ Sbjct: 15 LLAVILGLPALGAFVNGLFGKRLGKDAVRLMALAALGGAFLAAVTTFLMLPHEGGKLTWT 74 Query: 61 -----------GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSP 109 G+ + +DGL G + ++ +GFL +YS YMR + + Sbjct: 75 AWRWFSITGRMGQSIPIDVAFSVDGLSGTMILVITGVGFLIHLYSSAYMREDPGYY---- 130 Query: 110 VTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAWKY 168 ++ + +LF+F+ML+++ +NL V++ E + S L+G + + A K Sbjct: 131 ----RFFAYLNLFIFSMLVLIMGDNLAVLFVGWEGVGMCSYLLIGFWFKDDKNASAGKKA 186 Query: 169 IIICTVGVAFGLFGTVLVYANAASVMPQAEMAIF----------------------WSEV 206 ++ +G L ++ ++ A + Sbjct: 187 FVVNRIGDFGLLVAMAMLAYYTGTLNFDGIAANAGNLLAAVKIWPIGNMSADTVPGFLSF 246 Query: 207 LKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCA 265 L S + LA + L +G K+ P++ WLPDA + P+PVSAL+ A ++ Sbjct: 247 LIPSQPVLVYAGTLAALALFLGCAGKSAQIPLYVWLPDAMA-GPTPVSALIHAATMVTAG 305 Query: 266 LLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLV 325 + ++ R + + S F ++ + G+ + AA L Q D+K++LAYS+V +G + Sbjct: 306 VYLVARLSAVF---VLSPFAMAVVAVTGVATALFAASIGLFQNDLKKVLAYSTVSQLGFM 362 Query: 326 AVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG--------TRDLNVVCGML 377 + +G+G A H+L H+ K LF G+G+V+ ++D+ + G+ Sbjct: 363 FIGVGVG---AFAAGFFHVLTHAFFKACLFLGAGSVIHAMHARIHDTDQSQDMRNMGGLK 419 Query: 378 KIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN------------------HL 419 MP T F L++AG P F F S+ + + Sbjct: 420 NHMPLTRWTFLLACLSIAGFPGFAGFWSKDEILWRAFSSRIESVSTRGQPVWQWPEWLGP 479 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLMAKPP-----------------------------Q 450 I + +L T+ + R + + + Sbjct: 480 AIYWVGILAATMTAFYMFRAYFQTFHGEFRGWTIVRGWKDPHPHGHHDDHHGHAHGEKLE 539 Query: 451 AVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGAS 491 + T P+++L + + G + +P++ + + Sbjct: 540 GPEPHESPLPMTIPLIVLGALSVFAGFLMAEPLVHLTHNHA 580 >UniRef50_B3QY40 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QY40_CHLT3 Length = 772 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 123/516 (23%), Positives = 211/516 (40%), Gaps = 70/516 (13%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAG 67 + LL PLL + V V +GI+L L L ++ + F G Sbjct: 10 IITLLLPLLSFTFLIFFNGKLPRKGDFVGV-GLVGISLALSLYIFTSVVFGEYDPNFKVG 68 Query: 68 LWLH--------------------IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGEL 107 ID L + L ++ +I FL I+S+GYM + +G Sbjct: 69 WSFTWLDFGNVPGVGPLTISMGILIDNLTAIMLVVVTLISFLVHIFSMGYMAGDKYYG-- 126 Query: 108 SPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAW 166 YY + +F F+ML +V S+NL ++ E LSS L+G + ++ + +A Sbjct: 127 ------RYYAYLGIFTFSMLGIVLSDNLFSIYIFWELVGLSSYLLIGFFFEKDSAADAQK 180 Query: 167 KYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLL 226 K + VG G +++Y+ + + + + + L + + L Sbjct: 181 KAFLTNRVGDIGMWLGILILYSQFHTFGYEEI----YQNIQDGNFTLSEAWLTAGGLLLF 236 Query: 227 IGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFP 285 +G K+ FP+H WLPDA E P+PVSAL+ A ++ + + R + I+ Sbjct: 237 MGCVGKSAQFPLHIWLPDAM-EGPTPVSALIHAATMVAAGVYFVARIFPILSVD-----A 290 Query: 286 NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 ++ G + +AA + Q DIKR+LAYS++ +G + + +GIG A H++ Sbjct: 291 LHVIAFIGAFTAFMAATIAITQHDIKRVLAYSTLSQLGYMVMGMGIG---AYAPAFFHLV 347 Query: 346 NHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 H+ K LF GSG V+ +D+ + G+ K MP+T F LAL+G+P + F+ Sbjct: 348 THAFFKACLFLGSGAVIHATHHEQDMRWMGGLRKNMPWTFATFTIAMLALSGLPMTSGFM 407 Query: 405 SEFMTITAGL------ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRG--- 455 S+ + L + LI V L + R V + + Sbjct: 408 SKDAILAGSLGFANVEGGFYYLIPVFGFGAAMLTAFYMGRQMWLVFFGENRAHLKPASHD 467 Query: 456 ----------------DLGWLTTSPMVILLVMMLAM 475 D+ W+ P+V+L + + Sbjct: 468 DHHHGHDDHHGHHSVHDVDWVMRFPLVVLATLSVFF 503 >UniRef50_Q11VC3 NADH dehydrogenase I chain L n=5 Tax=Bacteroidetes RepID=Q11VC3_CYTH3 Length = 636 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 126/526 (23%), Positives = 221/526 (42%), Gaps = 40/526 (7%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 L+ PLL L+ K + + + ++L L D Sbjct: 1 MMEFVWLIPALPLLGFLILSLFNKHIPKSASGYIASAMMLGSFAIVLTLLCKAAGGDLTA 60 Query: 63 I------------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPV 110 L ID L F++I+ +GFL +YSI YM + Sbjct: 61 TTVTVFDWIHVGDLKLALSFQIDNLSVWFMSIITGVGFLIHVYSISYMHDDEG------- 113 Query: 111 TLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYI 169 + Y+ + +LF+F+MLL+V +N +VM+ E L S L+G + + + +AA K Sbjct: 114 -VTRYFSYLNLFVFSMLLLVMGSNYVVMFTGWEGVGLCSYLLIGFWFKNQAYNDAAKKAF 172 Query: 170 IICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGF 229 I+ +G L G +L+Y S+ + + ++ + L +G Sbjct: 173 IMNRIGDLGFLLGMLLIYNQFKSLEYSVVFDQALKII---NPNEPSGIIFAITMLLFVGA 229 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRL 288 K+ P++ WLPDA + P+PVSAL+ A ++ + ++ R I+ A + + Sbjct: 230 MGKSAQIPLYTWLPDAMA-GPTPVSALIHAATMVTAGIYMIARSNILYSMAPCT---LDI 285 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 + + G + +AA L Q DIK++LAYS+V +G + + +G+G G A + H+ H+ Sbjct: 286 IYVVGTGTAILAALIGLTQTDIKKVLAYSTVSQLGFMFMAIGLG---GYSAGVFHVTTHA 342 Query: 349 LAKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 K LLF G+G+V+ G +D+ + G++K +P T + F LA+AG+PP F S+ Sbjct: 343 FFKALLFLGAGSVIHAMGGEQDIRKMGGLMKKLPITFITFIIATLAIAGIPPLAGFFSKD 402 Query: 408 MTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLGWLTTS 463 + + L L + L + RM + Q + + L T Sbjct: 403 AILALAFESS-PLKWGLGVFAALLTTFYMFRMLFLTFFGEFRGTTHQKEHLHESPLLMTI 461 Query: 464 PMVILLVMMLAMGT--HIPQPVIRILAGASTIVLSGTHDLPAQRST 507 P+++L ++ + G V S + LPA Sbjct: 462 PLMVLALLTVVSGFIEIPHVFVHEGSNWFSHYLAGANIALPAASHL 507 >UniRef50_C0Z765 NADH-quinone oxidoreductase chain L n=2 Tax=Bacillales RepID=C0Z765_BREBN Length = 637 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 132/537 (24%), Positives = 227/537 (42%), Gaps = 35/537 (6%) Query: 2 SYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG 61 + L+ L PLL ++ + ++ V + + + +L W Sbjct: 3 TLMHYAWLIPLFPLLAFIVIVSFGRQLKEGAAIVGITLTAVSFGIAVLIFWERFQGGGTD 62 Query: 62 EIFAAGL----------WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 + ++ L + L I+ ++ L IYS GYM + Sbjct: 63 YNYVIDWLHIGDIVINMGFEVNPLNAMMLVIVTLVSLLVQIYSKGYMHGDE--------R 114 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYII 170 +Y + LF F+ML +V S NL+ ++ E + S LVG Y + + AA K I Sbjct: 115 FPVFYQYLALFTFSMLGLVISPNLLQVYIFWELVGVCSFLLVGYYYFKNEAKAAAKKAFI 174 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 + +G G L++ S A L+P ++ LA + + IG Sbjct: 175 VTRIGDLGLFIGICLLFWWTGSFEYGAIFESI------ALGRLEPWMITLAAILIFIGAM 228 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+G FP+H WLPDA E P+PVSAL+ A ++ + ++ Y + I SD ++ Sbjct: 229 GKSGQFPLHTWLPDAM-EGPTPVSALIHAATMVAAGVYLVAATYPLF---IASDTALTVV 284 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 G + AA L QRDIKR+LAYS+V +G + + LG+ G G A H++ H+ Sbjct: 285 AYVGGFTAIFAASIGLTQRDIKRVLAYSTVSQLGYMMMALGVAGAAGYVAGSFHLMTHAF 344 Query: 350 AKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 K LLF G+G+V+ T+++ + G+ K MP TA+ F G LA+AG+ PF F S+ Sbjct: 345 FKALLFLGAGSVIHAVHTQNVFEMGGLWKKMPITALTFLIGCLAIAGIFPFAGFWSKEAI 404 Query: 410 ITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILL 469 + A + ++ + LL + R+ K + + T P+++L Sbjct: 405 LGAVYGAHRYDLLFIALLAAFFTAFYMFRLFFLTFAGKARGKHEAHESPGVMTGPLLVLA 464 Query: 470 VMMLAMGT----HIPQPVIRILA-GASTIVLSGTHDLPAQRSTWHDFLPSGTASVSE 521 ++ + G + P +L+ T + S + W + + + Sbjct: 465 LLAVVAGFVNTPYAPLLSDWLLSTNTGTAITSIFGGGSEHAAAWLQIVALLISILGV 521 >UniRef50_C7R7H2 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Gammaproteobacteria RepID=C7R7H2_KANKD Length = 672 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 119/544 (21%), Positives = 223/544 (40%), Gaps = 59/544 (10%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 MS L++L PL+ ++L KR + + I+ +L L ++ DA Sbjct: 1 MSMQTQLLLIVLAPLIGAMLAGLLGKRLGRRLTHRLTIIGVVISFILSLRIFWGFLYGDA 60 Query: 61 GEI------------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 + + ID L L + ++ + + IYSIGYM + + Sbjct: 61 TPVDMTVYHWASFSDLTIQIGFMIDSLSALMMVVVTFVSLMVHIYSIGYMHDDDGYQ--- 117 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWK 167 ++ + LF F+ML++V +NN + ++ EA L S L+G + Q+ ++ A K Sbjct: 118 -----RFFSYLSLFTFSMLMLVMANNFLQLFFGWEAVGLVSYLLIGFWYQKESAIFANMK 172 Query: 168 YIIICTVGVAFGLFGTVLVYANAASVMPQAEMA----------------------IFWSE 205 ++ VG + G ++ + + Sbjct: 173 AFLVNRVGDFGFILGIGAIFLLFGTFDYAPIFKSMGQAEEIMQISERSAENALGLMSLDG 232 Query: 206 VLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNC 264 ++ + L IG K+ P+H WLPD+ E P+P+SAL+ A ++ Sbjct: 233 SFVAWGDTSWPIITFICICLFIGAMGKSAQVPLHVWLPDSM-EGPTPISALIHAATMVTA 291 Query: 265 ALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGL 324 + ++ R + S+ ++ I G ++ +VQ DIKR++AYS++ +G Sbjct: 292 GVFMVARMSPLFE---FSETALTMVTIIGAITALFMGLVAIVQNDIKRIIAYSTLSQLGY 348 Query: 325 VAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFT 383 + V LG+ AA+ H+ H+ K LLF G+G+V++ + +++ + G+ K +P T Sbjct: 349 MVVALGVS---AYSAAIFHLFTHAFFKALLFLGAGSVIVALHHEQNIRKMGGLYKRLPLT 405 Query: 384 AVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL---LIIVLLLLLLTLVLAGLVRMA 440 G LAL G P F F S+ I A ++ + + +RM Sbjct: 406 YWTTLVGTLALIGTPFFAGFYSKDAIIMAASEAQGPAASFAYFAVMAGVVVTALYSMRML 465 Query: 441 ARVLMAKPPQAVNR----GDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLS 496 V K + + T P++ L V L +G + +P++ A ++++ Sbjct: 466 LVVFHGKSSLDEQHLNQLTESPRVITWPLIALAVPSLIIGWFMTKPMLDGDYFAESLMVL 525 Query: 497 GTHD 500 +HD Sbjct: 526 TSHD 529 >UniRef50_Q1RKE6 NADH-quinone oxidoreductase subunit L n=15 Tax=Rickettsia RepID=NUOL_RICBR Length = 642 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 104/491 (21%), Positives = 207/491 (42%), Gaps = 35/491 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWV-------VQTAA 58 + +++L PL +L+ +R ++ L ++ L L ++ + Sbjct: 5 IAIMIILLPLASALINGLFVRRIDKKLASIVATSFLSLSALFALIIFYHTGLNGHIIHIK 64 Query: 59 DAGEI----FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 I F ++ID L + + + + IYS+GYM + + Sbjct: 65 LLPWIEVSQFKVDWSIYIDQLTSIMFIAVTWVSSVVHIYSLGYMSRDKG--------IVR 116 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICT 173 + F LF F ML++V+++N + ++ E + S L+G + + S +AA K I Sbjct: 117 FLSFLSLFTFFMLMLVSADNFLQLFFGWEGVGICSYLLIGFWYSKESANKAAIKAFIANR 176 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEM--AIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 VG + G + + S + A + + + +++ +A + L IG Sbjct: 177 VGDFAFILGVITIIFYCHSANYEDVFLLAPKLANTKILLADFEISILDIACLLLFIGCMG 236 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ +H WLPDA E P+PVSAL+ A ++ + ++ R + S + + Sbjct: 237 KSAQIGLHVWLPDAM-EGPTPVSALIHAATMVTAGVFLVARCSYLFEY---SPMVLQFIT 292 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 I G ++ AA ++Q DIK+++AYS+ +G + + G+ + + H++ H+ Sbjct: 293 IIGGITCLFAASIAIMQNDIKKIIAYSTCSQLGYMFMACGVS---AYNSGIFHLVTHAFF 349 Query: 351 KTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 K LLF +G+V+ +D+ + + MP T F G+LAL G+ P F S+ + Sbjct: 350 KALLFLSAGSVIHAVHEQDIFKMGELRNKMPITYGNFLIGSLALIGIYPLAGFYSKDSIL 409 Query: 411 TAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA----VNRGDLGWLTTSPMV 466 A + + + +L L +++ V K + + + +P+ Sbjct: 410 EAAYSSGS-FMFIFGILAAILTAIYSMKIIMLVFHGKTRLEKDVFEHAHEPPKVMNNPLT 468 Query: 467 ILLVMMLAMGT 477 +L+ G Sbjct: 469 LLVAGSFFSGM 479 >UniRef50_B3QXL9 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXL9_CHLT3 Length = 643 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 119/548 (21%), Positives = 220/548 (40%), Gaps = 56/548 (10%) Query: 3 YSVMFALLLLTPLLFSLL------CFACRKRRLSATRTVTVLHSLGITLLLILALWVVQT 56 L +L PL+ L+ +K+ + V + I + + L Sbjct: 1 MENWIFLTVLLPLIGFLINGALYLAGFSKKQEIGREMLVGGFSATVILVPFFILLKTFLD 60 Query: 57 AADAGEIFAA---------------GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHE 101 + + ID L L ++ +G L IYSIGYM + Sbjct: 61 YPSDHDAQPLLFPIYQWIEAGGLDISITYRIDSLSLLMGLVVTGVGSLIHIYSIGYMHGD 120 Query: 102 VAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS- 160 ++ + +LF+F M+ ++ + ++ +M+ E L S L+G + + Sbjct: 121 KD--------FARFFSYLNLFIFAMMNLILAESMPLMFLGWEGVGLCSYLLIGFWYDKKF 172 Query: 161 -------SLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLL 213 + AA K I+ +G L L++ N + ++ ++ L Sbjct: 173 DGVGITWTGNAANKAFIVNRIGDFAMLIAMFLIFQNIGRLDFTGILS--------GAASL 224 Query: 214 DPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRY 272 D L + + IG K+ P+ WLPDA + P+PVSAL+ A ++ + ++ R Sbjct: 225 DAGLAFWITLLIFIGSTGKSAQIPLFVWLPDAMA-GPTPVSALIHAATMVTSGIYLIARL 283 Query: 273 YIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG 332 + A + ++ + G L+ +A +VQ DIK++LAYS+V +G + + LGIG Sbjct: 284 SPLFLLAPET---MHIIAVVGTLTAIMAGTIGIVQNDIKKVLAYSTVSQLGYMFLALGIG 340 Query: 333 GPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGT-RDLNVVCGMLKIMPFTAVLFGGGA 391 A+ H+ H+ K LF GSG+V+ +D+ + G+ K MP TA+ F Sbjct: 341 ---AFSTAIFHVATHAFFKACLFLGSGSVIHGMHEEQDIRKMGGLFKKMPSTAITFLIAT 397 Query: 392 LALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP-- 449 ALAG P F S+ + A ++ L+ + +L + +R+ + P Sbjct: 398 FALAGFPLTAGFFSKDAILAAAFGSHNTLLYGVGVLTAVITAFYSMRLYTLTFLGNPRWS 457 Query: 450 QAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWH 509 + + + + T P+ +L + L G PV++ + S S Sbjct: 458 EHAHPHESPAVMTLPLWVLAALSLVGGFIGLPPVVQETNWIDGWLHSAVEIGHFHLSHET 517 Query: 510 DFLPSGTA 517 ++L + Sbjct: 518 EWLLIALS 525 >UniRef50_Q1H3T5 NADH dehydrogenase (Quinone) n=12 Tax=Proteobacteria RepID=Q1H3T5_METFK Length = 966 Score = 385 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 135/529 (25%), Positives = 229/529 (43%), Gaps = 37/529 (6%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL-------WVVQTAAD 59 A L L P + ++ + ++ V +L ++ LL V+Q Sbjct: 3 LAYLTLIPFIGAIFTKLSTRLGRYSSAWVAILSAMLSLFLLWPLAMQAWQGNTVIQRITP 62 Query: 60 AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 L +DGL LF ++ ++G + IY+ Y+ ++ +Y + Sbjct: 63 WMPELGISLAFRLDGLSLLFSLMILLVGLIVVIYARYYLS--------PRDSMGRFYSYL 114 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAF 178 LF+ +ML VV S N+I + E T+LSS L+ + QR + A + I G Sbjct: 115 LLFMGSMLGVVLSENIIQLLMFWELTSLSSFLLISYWQQREEASRGARMALTITGGGGLA 174 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 L G +L+ A S + L ++ L + +L+G TK+ FP Sbjct: 175 MLGGFLLLGNMAGSYDLSDIL-------LAGDAIRSHEHYPLMLLLILLGVFTKSAQFPF 227 Query: 239 HAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSV 297 H WLP+A + AP+PVSA L A ++ + +L R + + G+ ++ G+ + Sbjct: 228 HFWLPNAMA-APTPVSAYLHSATMVKAGIFLLARLFPAL---SGTPEWTWIVSGVGIATF 283 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 ++ L + D+K LLAYS++ ++GL+ GIG PL + A + HI+NH+ K LF Sbjct: 284 VTGSYIALFKHDMKALLAYSTISHLGLIVALFGIGTPLAVVAGIFHIINHATFKASLFML 343 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 +G V + GTRD+ + G+ + MP++AVL A A+AG+P N F+S+ M + +A Sbjct: 344 AGIVDHETGTRDIRHLGGLRRYMPYSAVLMVIAAAAMAGIPGLNGFISKEMFLDQIVAHG 403 Query: 418 -----HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVN--RGDLGWLTTSPMVILLV 470 L+ ++ A +R+A V P + D P+ IL+ Sbjct: 404 NTFPHQWLLPAIVTAGAVFSAAYSIRIAHSVFFGSEPDDLPKAPHDPSSGMQIPVAILVA 463 Query: 471 MMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASV 519 +A+G + L T T + WH P+ S Sbjct: 464 ACVAVGVLPA--IAEPLVTLVTASTLQTAPPAFHLAIWHGLTPALWMSA 510 >UniRef50_B5EN60 Proton-translocating NADH-quinone oxidoreductase, chain L n=25 Tax=Proteobacteria RepID=B5EN60_ACIF5 Length = 660 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 124/527 (23%), Positives = 224/527 (42%), Gaps = 38/527 (7%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA--------- 57 + ++ + PL+ +L+ R ++ L + LW Sbjct: 16 YLVIPVAPLVGALVAGFWGWRLRDHAHWAPIIGVAIAFYLSLAVLWQTGHGITFYGDVYT 75 Query: 58 ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 + ID L L L ++ + +Y++GYM + + ++ Sbjct: 76 WAVLGHLPVSVGFDIDSLTALMLVVVTFVSLSVHLYTVGYMHGDPGY--------ARFFS 127 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVGV 176 + LF F+M+++V SNN + ++ EA L S L+G + QR S AA K I+ VG Sbjct: 128 YIALFTFSMIMLVMSNNFLQLFFGWEAVGLVSYLLIGFWFQRESANVAAIKAFIVNRVGD 187 Query: 177 AFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDP---TLMLLAFVFLLIGFGTKT 233 L G VY S+ + A + + ++ +++ + L +G K+ Sbjct: 188 FGFLIGIAAVYHYCGSLDYRTVFAAVPHLIGQTLEIIPGHPWSVLTWIALLLFVGAMGKS 247 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 P+H WLP++ E P+P+SAL+ A ++ + ++ R I Q S ++LI Sbjct: 248 AQVPLHVWLPESM-EGPTPISALIHAATMVTAGIFMVARMSPIFEQ---SATALSVVLII 303 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G ++ LVQ DIKR++AYS++ +G + LG AA+ H++ H+ K Sbjct: 304 GAVTAFFMGLVGLVQNDIKRIIAYSTISQLGYMTAALGAS---AFSAAIFHLMTHAFFKA 360 Query: 353 LLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 LLF +G+V+ +D+ + G+ K+MP T + F G+L+L+G+PPF F S+ + I Sbjct: 361 LLFLAAGSVIHAMSNEQDIRKMGGLRKVMPITYITFLIGSLSLSGIPPFAGFFSKDLIIE 420 Query: 412 AGLAR---NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLGWLTTSP 464 A +L+ + RM V P + + W+ T P Sbjct: 421 AVGLSTLPGAGWAEWMLVAGAFVTALYTFRMFFLVFHGAPRMDAHTRAHLHESPWVITVP 480 Query: 465 MVILLVMMLAMGTHIPQPV-IRILAGASTIVLSGTHDLPAQRSTWHD 510 ++ L + + G PV + +S +V + + R+ W Sbjct: 481 LIALAIPAVYAGWAYIGPVGLGHFLDSSLVVAPQWNTIGEIRAHWQG 527 >UniRef50_Q02CT3 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02CT3_SOLUE Length = 624 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 119/533 (22%), Positives = 223/533 (41%), Gaps = 41/533 (7%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLIL--------------- 49 + L+ + PL L+ ++ + + + S+ ++ L +L Sbjct: 1 MQLWLIPIFPLAGFLINGLFGRKFSKSLVSTVAVGSVVLSFLWVLKTISAMGDLNTPHLE 60 Query: 50 --ALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGEL 107 W+ + G +D L + L ++ IG L IYSIGYM HE Sbjct: 61 HYFTWIQSGFPGSPNFVNIGCDFLVDRLTIVMLLVVTGIGSLIHIYSIGYMAHEHG---P 117 Query: 108 SPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAW 166 + ++ + +LF+F ML++V N ++++ E L S L+G Y + + A Sbjct: 118 NFGGFYRFFAYLNLFMFFMLVLVLGANYLLLFVGWEGVGLCSYLLIGFYFDKKFATNAGN 177 Query: 167 KYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLL 226 K I+ +G L++ + S+ ++ + + LL Sbjct: 178 KAFIVNRIGDFGFSLAMFLIFHHFGSLDFAEVFH--------KAPGGTEATLTTICLLLL 229 Query: 227 IGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFP 285 +G K+ P++ WLPDA + P+PVSAL+ A ++ + + R +++ A G Sbjct: 230 VGACGKSAQIPLYVWLPDAMA-GPTPVSALIHAATMVTAGVYMTARSWVLFTHAPG---A 285 Query: 286 NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 ++ I G+ + +AA L Q DIK++ AYS+V +G + V +G G A + H++ Sbjct: 286 MDVMAIIGIATAFMAATIGLAQNDIKKVFAYSTVSQLGYMFVGVGSG---AFSAGVWHLV 342 Query: 346 NHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 H+ K LLF G+G+V+ G +D+ + G+ K +P T +A++G+PPF+ F Sbjct: 343 THAFFKALLFLGAGSVIHSLSGEQDMRNMGGLRKKIPITFWTMACAWVAISGIPPFSGFF 402 Query: 405 SEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSP 464 S+ + A +H I + ++ L + R + + + + +P Sbjct: 403 SKDAILVAAYQHSH-AIYWIGVITAELTAFYVSRAMFMTFFGEYRGKAHPHESPAVMWAP 461 Query: 465 MVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTA 517 + +L V+ L G P L + + + S FL A Sbjct: 462 LAVLAVLSLIGGMVFNIP--EFLKAMFPAMEEVDNPMLMYISIAFGFLGIALA 512 >UniRef50_A8LTG8 NADH dehydrogenase (Quinone) n=58 Tax=Proteobacteria RepID=A8LTG8_DINSH Length = 969 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 134/527 (25%), Positives = 237/527 (44%), Gaps = 36/527 (6%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA----ADAGE 62 ++ L P L +L+ + +A + T + + ++L++ V A+ G Sbjct: 8 LFIIALLPFLGALVPGLMIRAGRTACASFTAVPTALAFIMLLILSPAVLRGEVITAEIGW 67 Query: 63 IFAAGLW--LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 + GL +DGLG LF ++ +G L +Y+ Y+ + G+ +Y + Sbjct: 68 LPQLGLSASFFLDGLGLLFALMITGVGLLIILYARFYLSGDDPMGQ--------FYTYLL 119 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVAFG 179 LF ML +V S+N++++ E T+LSS L+G + + A + + G Sbjct: 120 LFQGAMLGIVLSDNILLLLIFWELTSLSSFLLIGYWKHLPEGRQGARMALAVTGAGGLAM 179 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 + G +++ S + + L A + +L+G TK+ FP H Sbjct: 180 IGGMLILGNIVGSYNLTDILQ-------AGEQIRASEWYLPALILILLGAFTKSAQFPFH 232 Query: 240 AWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 WLP A + AP+PVSA L A ++ + ++ R + ++ G+D ++ G++++ Sbjct: 233 FWLPHAMA-APTPVSAYLHSATMVKAGVFLMARMWPVL---AGTDAWFYIVATTGLVTMV 288 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 + A L + D+K LLA+S+V ++GL+ + LG G AA+ HI+NH K LF + Sbjct: 289 MGAGIALFKDDLKALLAFSTVSHLGLLTMLLGFGTQAAAVAAVFHIINHLTFKAALFMTA 348 Query: 359 GNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG----L 414 G V + TRD+ + G+ +MP T + AL++AG+P FN FLS+ M + Sbjct: 349 GIVDHETHTRDIKRLGGLRHLMPITFAIGTVAALSMAGIPLFNGFLSKEMMLEEASHTGW 408 Query: 415 ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA--VNRGDLGWLTTSPMVILLVMM 472 N ++ V+ L +A R V + D + + +L+V++ Sbjct: 409 LGNPWVVPVVATFGALLSVAYSFRFIGHVFLGPVRDDYPAKPHDPPFGMWASPALLVVLV 468 Query: 473 LAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASV 519 L +G P I+ AS+ V DL WH F P+ SV Sbjct: 469 LVIGMA-PFVAEGIVTAASSAVTG--ADLHPHLKIWHGFTPALWMSV 512 >UniRef50_D0D447 NADH-quinone oxidoreductase subunit l n=65 Tax=cellular organisms RepID=D0D447_9RHOB Length = 762 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 120/524 (22%), Positives = 202/524 (38%), Gaps = 34/524 (6%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 M ++L PL+ ++L K L + LL +++ + +F Sbjct: 1 MVTIILFAPLVGAILGGFGWKFMGEKGAMWLTTGLLFLAALLSWIVFLTLGESHTVTLFR 60 Query: 66 A--------GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 + ID L + L ++ + L +YS GYM H+ ++ Sbjct: 61 FIESGTLSTDWAIRIDRLTAIMLIVVTTVSALVHLYSFGYMAHDPQFEHT--PYRARFFA 118 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVGV 176 + LF F ML +VTS+NL+ M+ E L+S L+G Y ++ S AA K ++ VG Sbjct: 119 YLSLFTFAMLALVTSDNLVQMFFGWEGVGLASYLLIGFYYKKPSAGAAAIKAFVVNRVGD 178 Query: 177 AFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLL--DPTLMLLAFVFLLIGFGTKTG 234 G +Y S+ A Q L + L L +G K+ Sbjct: 179 FGFALGIFALYYLTDSIQFDQIFAEIPRLAETQLHFLWTEWNAANLIAFLLFVGAMGKSA 238 Query: 235 LFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFG 293 +H WLPDA E P+PVSAL+ A ++ + ++ R ++ A + G Sbjct: 239 QLFLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLVCRMSPLMEYAPQ---ATAFITFLG 294 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 + VAA LVQ DIKR++AYS++ +G + V G+G A+ H+L H+ K + Sbjct: 295 ATTAFVAATIGLVQNDIKRVIAYSTMSQLGYMFVAAGVGV---YSVAMFHLLTHAFFKAM 351 Query: 354 LFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALAL--AGMP-----PFNIFLS 405 LF G+G+V+ +D+ + +P T G LA+ G+P F F+S Sbjct: 352 LFLGAGSVIHAMHHEQDMRNYGALRTKIPMTFWAMMIGTLAITGVGIPLTGWFGFAGFVS 411 Query: 406 EFMTITAGLA-RNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLGWL 460 + I + A +L++ R+ K + + + Sbjct: 412 KDAIIESAWAGTQGGYAFWMLVIAALFTSFYSWRLMFMTFYGKARGDKHTHEHAHESPRV 471 Query: 461 TTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQ 504 P+ +L V + G + H A Sbjct: 472 MLIPLGVLAVGAVFSGMVFYATFFGNHDKVLSFFGMPAHHAEAS 515 >UniRef50_Q9XAR5 NADH-quinone oxidoreductase subunit L n=38 Tax=Actinomycetales RepID=NUOL_STRCO Length = 654 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 114/520 (21%), Positives = 212/520 (40%), Gaps = 58/520 (11%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA----- 57 + ALL+ PLL +++ +R + L + +L ++ + + Sbjct: 1 MENLIALLVAAPLLGAVVLLCGGRRLDRVGHWIGTLLAAVSFVLGVVLFADLLGSGAEDR 60 Query: 58 --------ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSP 109 E F A + +D L F+ ++ +G L +YS+ YM H+ Sbjct: 61 TLTQHLFSWIPVEGFQADVAFRLDQLSMTFVLLITGVGSLIHLYSVAYMEHDE------- 113 Query: 110 VTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKY 168 ++G+ +LFL ML++V ++N ++++ E L+S L+G + + S AA K Sbjct: 114 -RRRRFFGYLNLFLAAMLILVLADNYLLLYVGWEGVGLASYLLIGFWQHKPSAATAAKKA 172 Query: 169 IIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIG 228 ++ VG G +L++ + + L + + + L Sbjct: 173 FLVNRVGDMGLSIGIMLMFLWFGTFAFGPVLGGHGEAGLAAGADEGKLTAIALMLLLAA- 231 Query: 229 FGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNR 287 K+ P+ +WL DA E P+PVSAL+ A ++ + +++R I A Sbjct: 232 -CGKSAQVPLQSWLGDAM-EGPTPVSALIHAATMVTAGVYLIVRSGAIFNGAPD---AQL 286 Query: 288 LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNH 347 ++ I G +++ A + DIK+ LA S++ +G + + G+G P+G A++H++ H Sbjct: 287 VVTIVGAVTLLFGAIVGCAKDDIKKALAGSTMSQIGYMVLAAGLG-PIGYVFAIMHLVTH 345 Query: 348 SLAKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 K LF G+G+V+ D+ G+ K MP T V FG G LA+ G P + F S+ Sbjct: 346 GFFKAGLFLGAGSVMHGMNDEVDMRRYGGLRKYMPVTFVTFGLGYLAIIGFPGLSGFFSK 405 Query: 407 FMTITAGLARN---HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP-------------- 449 I A A+ ++ LL + + R+ + Sbjct: 406 DKIIEAAFAKGGTEGWILGACALLGAAITAYYMTRVMLMTFFGEERWRNAPTPSPAKPDV 465 Query: 450 ----------QAVNRGDLGWLTTSPMVILLVMMLAMGTHI 479 + + + L T PM++L V + G Sbjct: 466 EPAAETRGTYEPPHPHESPGLMTIPMIVLAVGSVGAGAFF 505 >UniRef50_Q8M9U5 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=5 Tax=Viridiplantae RepID=NU5C_CHAGL Length = 670 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 131/550 (23%), Positives = 227/550 (41%), Gaps = 50/550 (9%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL------------W 52 ++ L + + + + RK + + V + + L LIL+L + Sbjct: 10 LIPILPVFPSIFIGIGLMSFRKSFRNLRKFVGSMSIAFMFLTLILSLLFFNDQLSESYSY 69 Query: 53 VVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 + + + ID L + L ++ + IYS GYM H+ + Sbjct: 70 RFLFPWLSTKNLTLDIGYLIDPLTSIMLVLVTSVAVTVMIYSDGYMLHDQGYI------- 122 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIII 171 ++ + LF +ML ++ S NLI ++ E + S LVG + R + A K I Sbjct: 123 -RFFAYLSLFTASMLGLIVSPNLIQVYVFWELIGMCSYLLVGFWSTRPTAASACQKAFIT 181 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 VG L G + Y S +L + + ++ V L +G Sbjct: 182 NRVGDFGLLLGILGFYWLTGSFQFDIIQDRLNELLLTNNLNFTLFI--ISSVLLFLGPIA 239 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ FP+H WLPDA E P+P+SAL+ A ++ + ++ R I S L+ Sbjct: 240 KSAQFPLHIWLPDAM-EGPTPISALIHAATMVAAGIFLVARLLPIF---QLSPLLMILIA 295 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 G ++ + A + Q D+KR LAYS++ +G + + LGIG G AA+ H++ H+ + Sbjct: 296 FTGAITALLGACLAVAQTDLKRGLAYSTMSQLGYMMLGLGIG---GYQAAIFHLITHAYS 352 Query: 351 KTLLFCGSGNVLLKY---------GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFN 401 K LLF GSG+V+ +++++ + G+ K MP T V F G L+L G+PPF Sbjct: 353 KALLFLGSGSVIHSMEPVVGYDPNKSQNIDYMGGLRKYMPITGVTFLIGTLSLCGIPPFA 412 Query: 402 IFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVN-------- 453 F S+ I + L+ + L L + R+ + N Sbjct: 413 CFWSKDEIIADAFF-HLPLLGFIAWLTAGLTGFYMFRLYLLTFEGEFRAHKNLKSSSLEY 471 Query: 454 RGDLGWLTTSPMVILLVMMLAMG-THIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFL 512 + + T P+++L+ + +G +P + I + + L G S W DF Sbjct: 472 PHESSFSMTLPLILLMFPTIFIGFLGLPYNLGFIQSQILSTWLVGPSIDLNSSSNWIDFF 531 Query: 513 PSGTASVSEK 522 + SV Sbjct: 532 KTSATSVGIA 541 >UniRef50_Q28T51 Proton-translocating NADH-quinone oxidoreductase chain L n=270 Tax=cellular organisms RepID=Q28T51_JANSC Length = 711 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 120/530 (22%), Positives = 210/530 (39%), Gaps = 39/530 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 M +LL PL+ +L+C + V L ++ LL +++ Sbjct: 1 METILLFAPLVGALICGFSWRLIGEQAACVIATGFLFLSCLLSWVVFIGFEGETYTRSLF 60 Query: 66 AGLW---------LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 + + +D L + L ++ + L +YS GYM H+ E ++ Sbjct: 61 TWIESGTLFTDWAIRVDRLTAIMLIVITSVSALVHLYSFGYMAHDENFKEGESYR-PRFF 119 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVG 175 + F FTML++VT++NL+ ++ E ++S L+G Y ++ S AA K I+ VG Sbjct: 120 AYLSFFTFTMLMLVTADNLLQLFFGWEGVGVASYLLIGFYFRKPSAGAAAMKAFIVNRVG 179 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAI--FWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 L G ++ S+ + + +E+ ++ L IG K+ Sbjct: 180 DFGFLLGIFALFWMTDSIQFDVVLGMGAELAEMSIIFLGMELNAAETIAFLLFIGAMGKS 239 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 +H WLPDA E P+PVSAL+ A ++ + ++ R +I A ++I Sbjct: 240 AQLLLHVWLPDAM-EGPTPVSALIHAATMVTAGVFLVCRMSPVIEYA---PLAGNFIIII 295 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G LS VAA LVQ DIKR++AYS++ +G + V G+G A+ H+L H+ K Sbjct: 296 GALSAFVAATIGLVQNDIKRVIAYSTMSQLGYMFVAAGVGV---YSVAMFHLLTHAFFKA 352 Query: 353 LLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALAL--AGMP--------PFN 401 +LF G+G+V+ +D+ G+ K +P+T G LA+ G+P F Sbjct: 353 MLFLGAGSVIHAMHHEQDMRNYGGLRKKIPYTFWAMMIGTLAITGVGIPLLYVGFPVGFA 412 Query: 402 IFLSEFMTITAGLARN---HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNR 454 F+S+ I + A L++ R+ + + Sbjct: 413 GFVSKDAVIESAYAFGGDLGQFAFWALVIGALFTSFYSWRLMFLTFYGEARGNKHTHEHA 472 Query: 455 GDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQ 504 + P+ L + + G + A Sbjct: 473 HESPMTMLIPLGALAIGAVVAGMVWYGSFFGKTNYVAQFFGVPYAVEEAH 522 >UniRef50_Q2W3J5 NADH:ubiquinone oxidoreductase subunit 5 n=6 Tax=Alphaproteobacteria RepID=Q2W3J5_MAGSA Length = 642 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 122/546 (22%), Positives = 218/546 (39%), Gaps = 44/546 (8%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWV-------VQTAA 58 M + PLL +++ + + L + +L ++ QT Sbjct: 1 MITATVFLPLLGAVVAGLFGRFIGDRGAQIVTCALLITSAVLSGLIFQKVALGGEAQTVV 60 Query: 59 DAGEI----FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 A I + L +D L + L ++ + +YS+GYM H+ ++ Sbjct: 61 VAEWIRSGTMSVNWSLKVDTLTAVMLIVVTWVSAAVHVYSVGYMSHDP--------SIWR 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICT 173 ++ + LF F ML++VTS+NL+ M+ E ++S L+G + ++ S AA K ++ Sbjct: 113 FHSYLSLFTFAMLMLVTSDNLVQMFFGWEGVGVASYLLIGFWYEKPSASAAAIKAFVVNR 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTL--MLLAFVFLLIGFGT 231 VG G VY SV A A + + + + + L +G Sbjct: 173 VGDFGFALGIFGVYFLFGSVGFDAIFAAAPEKANATVNFFGGQWHAITICCLLLFVGAMG 232 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ +H WLPDA E P+PVSAL+ A ++ + ++ R + SD ++ Sbjct: 233 KSAQLGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFMVARMSPLFE---FSDTALTVVT 288 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 + G + AA VQ DIKR++AYS+ +G + +G+ AA+ H++ H+ Sbjct: 289 VIGAATAIFAATVGCVQNDIKRVIAYSTCSQLGYMFFAIGVS---AYQAAIFHLMTHAFF 345 Query: 351 KTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 K LLF G+G+V+ +D+ + G+ K + T VL G+LALAG+P F + S+ Sbjct: 346 KALLFLGAGSVIHAMSDEQDIRRMGGIWKHVKVTWVLMWIGSLALAGVPFFAGYYSKDTI 405 Query: 410 ITAGLARNHLL---IIVLLLLLLTLVLAGLVRMAARVLMAKPPQA----VNRGDLGWLTT 462 + A A + + L L R+ +P + + + Sbjct: 406 LEAAWASHTIAGQGAYWLGCTAAFLTAFYSWRLLLLTFHGRPRADEHVMAHVHESPAVML 465 Query: 463 SPMVILLVMMLAMGTHIPQPVIR------ILAGASTIVLSGTHDLPAQRSTWHDFLPSGT 516 P++ L L G + + + + +W LP+ Sbjct: 466 IPLLFLATGALFAGWAGYDMFVGHHQHDFWRSAILVTEAHPSLENAHHVPSWVALLPTVV 525 Query: 517 ASVSEK 522 A Sbjct: 526 AVSGIA 531 >UniRef50_D2QSX4 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Bacteroidetes RepID=D2QSX4_9SPHI Length = 642 Score = 380 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 117/498 (23%), Positives = 214/498 (42%), Gaps = 46/498 (9%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M ++ AL+ L PL+ L+ +R ++ + L L+ Sbjct: 1 MKIELLCALIPLFPLIGFLINGLGFRRVPKGLAGAISTVAVLASFLTSAYLFGAFLGNAN 60 Query: 61 GEI-----------------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVA 103 ID L L L ++ +G L +YSIGYM H+ Sbjct: 61 LSANAGPQIATLFDWISVGDLHINFSFQIDQLSLLMLLVVTGVGSLIHLYSIGYMSHDEG 120 Query: 104 HGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE 163 G+ + F +LF+F MLL+V +N ++M+ E L S L+G + + S Sbjct: 121 FGK--------FMAFLNLFIFFMLLLVMGSNYVIMFIGWEGVGLCSYLLIGFWNKNISYN 172 Query: 164 -AAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAF 222 AA K ++ +G L G ++ +V S + +L Sbjct: 173 NAARKAFVMNRIGDLGFLLGIFMLINTFGTVEYVDIFKQATSLA------VGDKTILAIT 226 Query: 223 VFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIG 281 + L +G K+ P++ WLPDA + P+PVSAL+ A ++ + +++R ++ A Sbjct: 227 LLLFVGAMGKSAQVPLYTWLPDAMA-GPTPVSALIHAATMVTAGIYMVVRSNVLYTLAPL 285 Query: 282 SDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAAL 341 + ++ +++ +AA L+Q DIK++LAYS+V +G + + L A + Sbjct: 286 T---LEIIGGIAIVTALLAASIGLLQNDIKKVLAYSTVSQLGYMFLGL---SATAYTAGM 339 Query: 342 LHILNHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 H++ H+ K LLF G+G+V+ +D+ + G+ K +P T + F G +A++G+PPF Sbjct: 340 FHVITHAFFKALLFLGAGSVIHAMSDEQDIRKMGGLRKALPVTFITFLIGTIAISGLPPF 399 Query: 401 NIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK----PPQAVNRGD 456 F S+ + N L+ L +L L + R+ + Q + + Sbjct: 400 AGFFSKDEILAHVFEHNK-LLWGLGVLGSGLTSFYMFRLLFLTFFGEFRGTEEQRHHLHE 458 Query: 457 LGWLTTSPMVILLVMMLA 474 T+P+V+L ++ + Sbjct: 459 SPATMTAPLVVLAILSII 476 >UniRef50_Q32RH9 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=6 Tax=cellular organisms RepID=NU5C_ZYGCR Length = 702 Score = 380 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 125/588 (21%), Positives = 236/588 (40%), Gaps = 86/588 (14%) Query: 2 SYSVMFALLLLTPLLFSLLCFAC------RKRRLSATRTVTVLHSLGITLLLILALWVVQ 55 S + ++ L P L +++ + + + +L +T+LL + + Q Sbjct: 3 SINQYVWIIPLLPCLTAVILGLGLISTKNATKSQRLGSAILSIGALLVTMLLSITVLWEQ 62 Query: 56 TAADAGE----------IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHG 105 +D+ + +D L + L ++ +G L IY+ GYM H+ + Sbjct: 63 VISDSAYRQLVSWIKVDNLFLEIGCLVDPLSAIMLVLVTTVGVLVMIYTHGYMSHDQGY- 121 Query: 106 ELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEA 164 ++ + LF +ML +V S NL+ ++A E + S LVG + R + A Sbjct: 122 -------VRFFAYLSLFTASMLGLVLSPNLVQVYAFWELVGMCSYLLVGFWFTRPSAAYA 174 Query: 165 AWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVF 224 K I VG L G + +Y S+ + +++ S+ + L+ + V Sbjct: 175 CQKAFITNRVGDFGLLLGILALYWLTGSLEFDIVASRAHQLLVENSA--NTVLLTVCCVL 232 Query: 225 LLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSD 283 L +G K+ FP+H WLPDA E P+P+SAL+ A ++ + ++ R + + Sbjct: 233 LFLGPIAKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVYLVARLLPLFQEV---P 288 Query: 284 FPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLH 343 ++ G ++ + A L Q+D+K+ LAYS++ +G + + LG+G A L H Sbjct: 289 LVMDIVAWTGGITAVLGATVALAQKDLKKGLAYSTMSQLGYMILALGVGS---YQAGLFH 345 Query: 344 ILNHSLAKTLLFCGSGNVLLKY---------GTRDLNVVCGMLKIMPFTAVLFGGGALAL 394 ++ H+ +K LLF GSG+V+ ++++ + G+ MP T V F G L+L Sbjct: 346 LITHAYSKALLFLGSGSVIHGIEPVVGYNPNQSQNMTYMGGLRSYMPITGVTFLIGTLSL 405 Query: 395 AGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA-------- 446 G+PPF F S+ + + ++ +L L L + RM Sbjct: 406 CGVPPFACFWSKDEILADAWHK-LPVLGLLAWLTAGLTAFYMFRMYFITFEGTFRGSSLI 464 Query: 447 ------------------------------KPPQAVNRGDLGWLTTSPMVILLVMMLAMG 476 K + ++ + T P+++L + + +G Sbjct: 465 SNKSSKQTLSVNKMDSVFALSNQTKDNTSLKASKHLDPHESSNAMTIPLIVLTIPTILIG 524 Query: 477 THIPQPVIRILAGASTI---VLSGTHDLPAQRSTWHDFLPSGTASVSE 521 + + L T + + W +F + SVS Sbjct: 525 FIGAPLPNGLTGSSLLSHWLYLDNTEIVELSTNGWTEFAITALPSVSI 572 >UniRef50_Q52978 Probable K(+)/H(+) antiporter subunit A/B n=110 Tax=Bacteria RepID=PHAAB_RHIME Length = 999 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 133/533 (24%), Positives = 234/533 (43%), Gaps = 36/533 (6%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAA------D 59 + ++ +L P SL+ + A +L L+ V + D Sbjct: 31 LLSVFILVPFAGSLIAIFFPSDQRGAISWFAGAIALVCFLVTAGLYPYVASGGVLHYRID 90 Query: 60 AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 L +DG LF A++ IG L +Y+ YM E + ++ F Sbjct: 91 WVPELGLNFTLRMDGFAWLFSALITAIGVLVALYARYYMAEED--------PVPRFFALF 142 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAF 178 F+ +ML VV S NLI++ E T++ S L+G + + + + A + I G Sbjct: 143 LAFMGSMLGVVLSGNLILLAVFWELTSIVSFLLIGYWHHNAHARDGARMALTITGTGGLA 202 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 G +++ S A +A ++ + L V +L+G TK+ FP Sbjct: 203 MFVGLIIIGKIVGSYELDAVLA-------SGDAIRNHPLYGTVLVLVLLGALTKSAQFPF 255 Query: 239 HAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSV 297 H WLP A + AP+PVSA L A ++ + +L+R++ ++ G++ ++ + G+ ++ Sbjct: 256 HFWLPHAMA-APTPVSAYLHSATMVKAGVFLLVRFWPVM---AGTEAWFWIVGLAGLTTL 311 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 + A+F + Q+D+K LLAYS++ ++GL+ V L +G PL AA+ HI+NH+ K LF Sbjct: 312 LLGAYFAIFQQDLKGLLAYSTISHLGLITVLLSLGSPLAAVAAVFHIVNHATFKASLFMA 371 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 +G + + GTRD+ + G+ MP TA L + A+AG+P N FLS+ M + + Sbjct: 372 AGIIDHESGTRDIRRLGGLFHFMPITATLAMVASAAMAGVPLLNGFLSKEMFFAEAIETH 431 Query: 418 HL-----LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA--VNRGDLGWLTTSPMVILLV 470 + + + + + +R V +PP + +P+ L++ Sbjct: 432 LVNPLDTVTPYVATIAGMFAVTYSLRFIHGVFFGRPPADLPRKPHEPPRWMRAPLDFLVL 491 Query: 471 MMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFL-PSGTASVSEK 522 L +G Q + L A VL S WH + P + V+ Sbjct: 492 ACLVVGIIPAQTIGPFLHTAVLSVLR-EGTPDYSLSVWHGWNIPLIMSFVALS 543 >UniRef50_P31971 NAD(P)H-quinone oxidoreductase chain 5 n=25 Tax=cellular organisms RepID=NU5C_SYNP2 Length = 664 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 119/520 (22%), Positives = 205/520 (39%), Gaps = 67/520 (12%) Query: 8 ALLLLTPLLFSLLCFAC------RKRRLSATRTVTVLHSLGITLLLILAL---------- 51 L+ + PLL +++ +L V VL +G ++ L L Sbjct: 9 WLIPVLPLLGAMVIGIGLISLNKFTNKLRQLNAVFVLSLIGTSMALSFGLLWSQIQGHEA 68 Query: 52 WVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 + A F + +D L L I+ + L IY+ GYM H+ + Sbjct: 69 FTYTLEWAAAGDFHLQMGYTVDHLSALMSVIVTTVALLVMIYTDGYMAHDPGY------- 121 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYII 170 +Y + +F +ML +V S NL+ ++ E + S L+G + R + A K + Sbjct: 122 -VRFYAYLSIFSSSMLGLVFSPNLVQVYIFWELVGMCSYLLIGFWYDRKAAADACQKAFV 180 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 VG L G + +Y S L + + L ++ V + +G Sbjct: 181 TNRVGDFGLLLGMLGLYWATGSFEFDLMGDRLMD--LVSTGQISSLLAIVFAVLVFLGPV 238 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ FP+H WLPDA E P+P+SAL+ A ++ + ++ R Y + ++ Sbjct: 239 AKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARMYPVFEPI---PEAMNVI 294 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 G + + A L Q DIK+ LAYS++ +G + + +GIG G A L H++ H+ Sbjct: 295 AWTGATTAFLGATIALTQNDIKKGLAYSTMSQLGYMVMAMGIG---GYTAGLFHLMTHAY 351 Query: 350 AKTLLFCGSGNVLLKYGT---------RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 K +LF GSG+V+ +D+ ++ G+ K MP TA F G LA+ G+PPF Sbjct: 352 FKAMLFLGSGSVIHGMEEVVGHNAVLAQDMRLMGGLRKYMPITATTFLIGTLAICGIPPF 411 Query: 401 NIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----------- 449 F S+ + N ++ + + + RM + Sbjct: 412 AGFWSKDEILGLAFEAN-PVLWFIGWATAGMTAFYMFRMYFLTFEGEFRGTDQQLQEKLL 470 Query: 450 -----------QAVNRGDLGWLTTSPMVILLVMMLAMGTH 478 + T P++ L V + +G Sbjct: 471 TAAGQAPEEGHHGSKPHESPLTMTFPLMALAVPSVLIGLL 510 >UniRef50_B8FRJ9 Proton-translocating NADH-quinone oxidoreductase, chain L n=11 Tax=Firmicutes RepID=B8FRJ9_DESHD Length = 651 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 127/490 (25%), Positives = 218/490 (44%), Gaps = 35/490 (7%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA---------- 57 L+ P L LL KR + T+++L L L I V + Sbjct: 13 WLIPFLPFLSFLLIALVTKRSKRLSSTISILAILTSFGLSIAIGLGVIQSGSQIVENPVL 72 Query: 58 ----ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 + ID + + L ++ ++ + IYSIGYM + Sbjct: 73 TTVNWLSIGGLHIDFGTLIDPMSAMMLFVVTLVASMVQIYSIGYMHGDPG--------FS 124 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIIC 172 YY F LF +ML +V + NL+ ++ E L S L+G + + S+ EAA K I Sbjct: 125 RYYAFQSLFAASMLGMVLATNLLQLFIFWELVGLCSYLLIGFWFFKVSAREAAKKAFITT 184 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAI---FWSEVLKQSSLLDPTLMLLAFVFLLIGF 229 VG L G + +Y ++ ++ + + + + + + + + IG Sbjct: 185 RVGDFGLLLGILFLYNTFGTLDFYGPGSLSVQMATSFHDFALIGGVSYLTIMAILVFIGP 244 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRL 288 K+G FP+H WLPDA E P+PVSAL+ A ++ + ++ R + + S F +L Sbjct: 245 VGKSGQFPLHVWLPDAM-EGPTPVSALIHAATMVVAGVYLVARMFFLF--DNASPFALQL 301 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 + G + AA + Q DIKR+LAYS++ +G + LG+G + A++ H++ H+ Sbjct: 302 VAGMGAFTAIFAATIAIAQDDIKRILAYSTLSQLGYMMFALGVGS---LTASMFHLMTHA 358 Query: 349 LAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 K L+F G+G+V+ + +++ + G+ K MP T F G LA+AG+PPF F S+ Sbjct: 359 FFKALMFLGAGSVIHALHHKQNIWDMGGLWKKMPITGTTFFIGVLAIAGIPPFAGFFSKD 418 Query: 408 MTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVI 467 + A H +I + L L + R+ M + + + W+ T P++I Sbjct: 419 EILLAAYH-GHPIIFAVGLFTAFLTAFYMSRLFFVAFMGEEKPENHPHESPWVMTLPLII 477 Query: 468 LLVMMLAMGT 477 L + G Sbjct: 478 LAFFSVVGGW 487 >UniRef50_Q55429 NAD(P)H-quinone oxidoreductase chain 5 n=19 Tax=cellular organisms RepID=NU5C_SYNY3 Length = 681 Score = 379 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 125/548 (22%), Positives = 207/548 (37%), Gaps = 85/548 (15%) Query: 6 MFALLLLTPLLFS------LLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAAD 59 + L+ + PL + L+ F +L V ++ LG L++ AL Q Sbjct: 7 LAWLIPVLPLFGATVVGIGLISFNQATNKLRQINAVFIISCLGAALVMSGALLWDQIQGH 66 Query: 60 AGEI----------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSP 109 A F + ID L L L I+ + L IY+ GYM H+ + Sbjct: 67 ASYAQMIEWASAGSFHLEMGYVIDHLSALMLVIVTSVALLVMIYTDGYMAHDPGY----- 121 Query: 110 VTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKY 168 +Y + LF +ML +V S NL+ ++ E + S L+G + R + A K Sbjct: 122 ---VRFYAYLSLFASSMLGLVISPNLVQVYIFWELVGMCSYLLIGFWYDRKAAADACQKA 178 Query: 169 IIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIG 228 + VG L G + +Y S E L S +L + + + + +G Sbjct: 179 FVTNRVGDFGLLLGILGLYWATGSFDFGTIGERL--EGLVSSGVLSGAIAAILAILVFLG 236 Query: 229 FGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNR 287 K+ FP+H WLPDA E P+P+SAL+ A ++ + ++ R Y + Sbjct: 237 PVAKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARMYPVFEPI---PVVMN 292 Query: 288 LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNH 347 + G + + A L Q DIK+ LAYS++ +G + + +GIG A L H++ H Sbjct: 293 TIAFTGCFTAFLGATIALTQNDIKKGLAYSTISQLGYMVMAMGIG---AYSAGLFHLMTH 349 Query: 348 SLAKTLLFCGSGNVLLKYG---------TRDLNVVCGMLKIMPFTAVLFGGGALALAGMP 398 + K +LF SG+V+ +D+ ++ G+ K MP TA F G LA+ G+P Sbjct: 350 AYFKAMLFLCSGSVIHGMEGVVGHDPILAQDMRIMGGLRKYMPITATCFLIGTLAICGIP 409 Query: 399 PFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP--------- 449 PF F S+ + N LL + + + RM Sbjct: 410 PFAGFWSKDEILGLAFQANPLLWF-VGWATAGMTAFYMFRMYFMTFEGGFRGNDQEAKDG 468 Query: 450 -------------------------------QAVNRGDLGWLTTSPMVILLVMMLAMGTH 478 + + T P++ L V + +G Sbjct: 469 VLQFYGLLPNFGPGAMNVKELDHEAGHDDHGHSSEPHESPLTMTFPLMALAVPSVLIGLL 528 Query: 479 IPQPVIRI 486 + Sbjct: 529 GRPWANQF 536 >UniRef50_C1SM60 NADH dehydrogenase subunit L n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM60_9BACT Length = 638 Score = 379 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 115/501 (22%), Positives = 217/501 (43%), Gaps = 35/501 (6%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQT-------- 56 + L LL PL+ L+ +R + + + + ++ + L L+ + + Sbjct: 2 IFAVLTLLGPLVAFLINGLLGRRYIKNLAPIVAIAGVSVSFVCALILFYLVSQGFSVDGT 61 Query: 57 --AADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 + + +D L + L ++ I + IYSIGYM + Sbjct: 62 LYTWVVAGKLSIPFGILVDPLSSIMLIVVTTISLMVHIYSIGYMHGDPG--------FWR 113 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICT 173 ++ + +F +ML++V NN ++++ E LSS L+G + + + +A K ++ Sbjct: 114 FFTYLSVFTLSMLVLVLGNNFLMLFVGWELVGLSSYLLIGFWFHKKSAADACKKAFVMNR 173 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPT----LMLLAFVFLLIGF 229 +G G +LV SV +K++ + L+ L L G Sbjct: 174 IGDFGFYIGLLLVIVTFRSVNYSDAFNSEAIHHIKEAGFMLFGMKVSLIDLMTFGLFCGA 233 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRL 288 K+ FP+H WLPDA E P+PVSAL+ A ++ + ++ R + +A + + Sbjct: 234 MGKSAQFPLHTWLPDAM-EGPTPVSALIHAATMVTAGVYMVARCNALFSEAHMTS---QF 289 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 ++ G ++ + A L Q D+KR+LAYS+V +G + + G+G AA+ H+ H+ Sbjct: 290 IVFAGAMTAFLGASIGLTQYDLKRILAYSTVSQLGYMIMATGVG---AYVAAIFHLFTHA 346 Query: 349 LAKTLLFCGSGNVLLKYGTR-DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 + K LLF SG+V+ + D+ ++ G+ K MPFT + G +A+AG+PP F S+ Sbjct: 347 MFKGLLFLCSGSVMHAMHDQLDVRLMGGLKKKMPFTHWTYLIGCIAIAGIPPLAGFWSKD 406 Query: 408 MTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV---NRGDLGWLTTSP 464 + A H + + + + + R V P + + + P Sbjct: 407 EILAMTFASGHNIAWFVGTAVAGMTAFYMFRSYFLVFQGTPRDQHLHDHAHESPFSMWGP 466 Query: 465 MVILLVMMLAMGTHIPQPVIR 485 +V L + + +G P+ Sbjct: 467 LVFLAFLSIFVGLVFGYPLEN 487 >UniRef50_B8J1C9 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Bacteria RepID=B8J1C9_DESDA Length = 642 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 114/510 (22%), Positives = 203/510 (39%), Gaps = 36/510 (7%) Query: 17 FSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL-----WVVQTAADAGEI----FAAG 67 + C + S + + + ILAL V+ A I + Sbjct: 15 AFAVTLVCGRWWGSRAHWLPIAAIVVSLCCSILALRDVMNGVIVNADVHNWITSGNLSVS 74 Query: 68 LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 +D L + L ++ + L IYS+GYM+ E + ++ + LF F+ML Sbjct: 75 FGFLVDQLTAVMLIVVTSVSTLVHIYSVGYMKGEDGYY--------RFFAYLALFSFSML 126 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVGVAFGLFGTVLV 186 ++V SNN + ++ EA LSS L+G Y +++S +A K I+ G L G + Sbjct: 127 MLVLSNNFLQLFFGWEAVGLSSYLLIGFYYEKTSASDAGKKAFIVNRFGDFGFLLGLFCI 186 Query: 187 YANAASVMPQAEMAI--FWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 + S+ A + + L + L G K+ P+H WLPD Sbjct: 187 FTLFGSLHYDNVFARAGLLQGLSYTIGGISIDAATLVCLLLFCGAAGKSAQLPLHVWLPD 246 Query: 245 AHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFF 303 A E P+PVSAL+ A ++ + ++ R + S ++ + G L+ AA Sbjct: 247 AM-EGPTPVSALIHAATMVTAGVFLVARCNALF---SLSPTALGVITVVGALTALFAATI 302 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLL 363 L Q DIKR++AYS++ + + + G+G A + H+ H+ K LLF G G+V+L Sbjct: 303 ALTQTDIKRVVAYSTISQLAFMFIGCGVG---AYAAGIFHLFTHAFFKALLFLGCGSVIL 359 Query: 364 KYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR---NHL 419 +D+ + G+ K MP T V F +L+++G+P F S+ + Sbjct: 360 GMHHEQDMRRMGGLRKYMPVTCVTFLLASLSISGVPGLAGFFSKDEILLMAFNADTTAGY 419 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLGWLTTSPMVILLVMMLAM 475 + + L R+ + + Q + + + T P+++L + Sbjct: 420 FAWGVGTFVAFLTAFYSFRLFFSIFYGEFRGTQHQREHLRESPLVVTIPLLLLACGAVGA 479 Query: 476 GTHIPQPVIRILAGASTIVLSGTHDLPAQR 505 G V+ + + Sbjct: 480 GWLGIPHVLGGSNLWAGFLEPVVGHPHLHL 509 >UniRef50_Q49W91 Na(+)/H(+) antiporter subunit A1 n=19 Tax=Bacillales RepID=MNHA1_STAS1 Length = 805 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 129/551 (23%), Positives = 239/551 (43%), Gaps = 55/551 (9%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALW-------VVQTAA 58 + + +L PL+F+L+ + VL + + L+ + A Sbjct: 3 LLHIAVLLPLIFALIIPFVYRFYKRIHLGWFVLPIPVVLFIYFLSYISTTMSGNTIMEKA 62 Query: 59 DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 + F L++DGLG LF ++ IG L +YSI Y+ + G +Y + Sbjct: 63 NWMPHFGMNFNLYVDGLGLLFSLLITGIGCLIVLYSISYLSRQEQLGH--------FYCY 114 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVA 177 LF+ ML +V S+NLI+++ E T+ SS L+ + + + + A K +++ G Sbjct: 115 LLLFMGAMLGLVLSDNLIILYLFWELTSFSSFLLISFWRDKQASIYGAQKSMLVTVFGGL 174 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L G +L+ + Q + S + + + + +LIG TK+ FP Sbjct: 175 SLLGGIILLSIAGGTTSIQELIN-------NASEIQTSPFFIFSMILVLIGAMTKSAQFP 227 Query: 238 MHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 + WLPDA EAP+PVSA L A ++ L ++ R I + G + G+++ Sbjct: 228 FYVWLPDAM-EAPTPVSAYLHSATMVKAGLYLVARMTPIFAVSQG---WIWTVTAVGLIT 283 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGP-------------LGIFAALLH 343 + A+ Q+D+K +LA+S+V +G++ LG+G AA+ H Sbjct: 284 LFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGVGAVSFHFEGAESQIYIAAFTAAIFH 343 Query: 344 ILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 ++NH+ K LF +G V GTRD+ + G+L IMP + + +L++AG+PPFN F Sbjct: 344 LINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITLITSLSMAGIPPFNGF 403 Query: 404 LSEFMTITAGLARN----------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA-- 451 LS+ + + + +LI + ++ +R ++ + + Sbjct: 404 LSKEKFLESMIEVTNVNLFSLDTLGILIPITAIIGSVFTFVYSIRFIGQIFLGSYKEDKL 463 Query: 452 -VNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHD 510 ++ L IL ++++ G I+ A + T + A+ +H Sbjct: 464 PKKAHEVSPLMLISPSILAILVIVFGLFPAILSGSIIEPAVNAI-GQTTNSTAEFHMFHG 522 Query: 511 FLPSGTASVSE 521 F P+ +++ Sbjct: 523 FTPAFFSTLGI 533 >UniRef50_B1KJV8 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Shewanella RepID=B1KJV8_SHEWM Length = 622 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 110/500 (22%), Positives = 220/500 (44%), Gaps = 29/500 (5%) Query: 31 ATRTVTVLHSLGITLLLILALWVVQTAADAGEI----FAAGLWLHIDGLGGLFLAILGVI 86 + ++ L ++ + + L V + + + L++D L + + I+ I Sbjct: 35 GSVSLAALLAVSLNIALWDQTQFVLQTSLGQWLTIDKLSLSFTLYLDPLSLVMITIITCI 94 Query: 87 GFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATT 146 G L +YS YM+ + +C ++ + +LF+ ML +V ++NLI+++ E Sbjct: 95 GALIHLYSASYMKED--------ADICRFFVYLNLFVSAMLFLVLADNLILLYLGWEGVG 146 Query: 147 LSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSE 205 L S L+G + + + +AA K II +G L G +L++ ++ Q A Sbjct: 147 LCSYLLIGFWYREVKNSQAANKAFIITRIGDTAMLIGIILIFYQFDTLNIQQIQAHSQQL 206 Query: 206 VLKQSSLL--DPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLL 262 + L L L + L G K+ P+H+WLPDA + P+PVSAL+ A ++ Sbjct: 207 LQNSELLTKGAVGLTSLCCLLLFAGAAGKSAQVPLHSWLPDAMA-GPTPVSALIHAATMV 265 Query: 263 NCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENM 322 + ++ R + A + I G++++ + A L Q D+KR+LAYS++ + Sbjct: 266 TAGIYLVARNIELFSLAPD---VLHFIAIVGVITLILGATSALAQTDLKRILAYSTISQL 322 Query: 323 GLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLL-KYGTRDLNVVCGMLKIMP 381 G + + LG+G AA+ H++ H+ K LLF +G ++ + +++ + G+ K P Sbjct: 323 GYMFLALGVGSA---SAAVFHLMTHAFFKALLFLSAGALIYCMHHEKNIFKMGGLRKSQP 379 Query: 382 FTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAA 441 A+ FG G ALA +P + F S+ + + L ++ ++ ++ Sbjct: 380 LLALSFGIGCAALASLPMTSGFFSKELILERTLFAQQPILWWGGVVGAFFTALYSAKLFF 439 Query: 442 RVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDL 501 + K + + + + ++ L+++ L G A +++ + Sbjct: 440 VIFFGKLSR-PSTHNTPRAMAAVLIALMLLSLIGGIQPQGVFAHFAALEQSLITAPPLSA 498 Query: 502 PAQRSTWHD-FLPSGTASVS 520 W FLP T ++ Sbjct: 499 LEH---WLPIFLPVLTVILA 515 >UniRef50_C9RKX6 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKX6_FIBSS Length = 651 Score = 376 bits (967), Expect = e-103, Method: Composition-based stats. Identities = 131/549 (23%), Positives = 227/549 (41%), Gaps = 47/549 (8%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF 64 + L+LL PL+ ++ + + + + G+ L ++D Sbjct: 6 TLGYLILLFPLITFVVNGLFLGNKCAKAAAIFAVICNGLAFAAAGTLAFHYFSSDFAPQK 65 Query: 65 AA---------------GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSP 109 A + + +D L + L ++ I F+ IYSIGYMR + A G Sbjct: 66 AILFDHTFIPFIGDLVARIGMLVDPLSVMMLVVVTFISFMVNIYSIGYMREDRAAG---- 121 Query: 110 VTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKY 168 ++ LF F+ML +V + NL M+ E +SS L+G + + ++ A+ + Sbjct: 122 ----RFFALLSLFSFSMLGLVIATNLFQMFIFWELVGVSSYLLIGFWYHKPSAVSASKQA 177 Query: 169 IIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLD------PTLMLLAF 222 I+ +F L G VLV S ++ + KQ L ++L Sbjct: 178 FILTRFADSFFLLGIVLVSYVVGSFDFSTLNSLSLIDFQKQFINLGLVTIPKSEALVLGS 237 Query: 223 VFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIG 281 + + G K+ +FPMH WLP+A E P+PVS+++ A ++ + ++ R + Sbjct: 238 ILIFTGGWGKSAMFPMHIWLPNAM-EGPTPVSSIIHSATMVVAGVYLVARLFPFF---AI 293 Query: 282 SDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELG------IGGPL 335 D L++ G ++ AA Q+DIKR+LAYS++ +G + LG + Sbjct: 294 CDNALTLIMWVGAFTMVFAAVIACTQKDIKRILAYSTLSQLGYMMFALGACKIGQVVAVT 353 Query: 336 GIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALA 395 G A+ HI H+ K LF +G+++ + GT DL+ + G+ K M T LA++ Sbjct: 354 GWTASTFHIFTHAFFKCSLFLIAGSLIHQVGTNDLDAMGGLGKKMKLTYACTLISILAIS 413 Query: 396 GMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA---V 452 G+PPF+ F S+ I A +H ++ L LL L + R+ P Sbjct: 414 GIPPFSGFFSKDEIILAAFQGHHYVVFGLALLTSGLTTFYMFRLFFLAFHGAPRHEGVKA 473 Query: 453 NRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFL 512 + T P+ IL + L G + L+ + + W F+ Sbjct: 474 GHVHEDFAMTLPIAILAIPALLSGVLGKGIFEQFFVPGQ---LNVPQLVRLDHAEWLPFV 530 Query: 513 PSGTASVSE 521 G A V+ Sbjct: 531 AVGIAVVAL 539 >UniRef50_A7GV43 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=Bacillaceae RepID=A7GV43_BACCN Length = 620 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 127/490 (25%), Positives = 221/490 (45%), Gaps = 31/490 (6%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAA- 66 L+ L PL +L ++ + + L + + ++ L ++ + + Sbjct: 6 WLIPLFPLASFMLLILFGRKLKGISSLLGSLFAFLSLVGAVIVLLERFSSENVKHTWLWL 65 Query: 67 -------GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 ++ L L L I+ + FL +Y+ GYM+ + L +Y + Sbjct: 66 KAGSVDISFGFEVNALNALMLLIVTTVSFLVHVYAKGYMQGDE--------RLSVFYAYL 117 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAWKYIIICTVGVAF 178 LF F ML +V S NL+ ++ E L S L+G Y + + AA K I+ +G A Sbjct: 118 GLFTFAMLGLVISTNLLQLYVFWELVGLGSFLLIGFYFFKEEAKAAAQKAFIMTRIGDAC 177 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 G +L++ A S +E + P+++ L +F+ IG K+G FP+ Sbjct: 178 LFIGMILLFWQAGSFDYDVIFKAVQTEA------ISPSIITLTALFIFIGAVGKSGQFPL 231 Query: 239 HAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSV 297 H WLPDA E P+PVSAL+ A ++ + ++ + + + S + + I G + Sbjct: 232 HTWLPDAM-EGPTPVSALIHAATMVAAGVYLVAAMFPLF---VASPVAMQTVAIVGGFTA 287 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 AA LVQ DIKR+LAYS+V +G + + LG G A++ H+ H+ K LLF Sbjct: 288 IFAASIALVQTDIKRILAYSTVSQLGYMMLALGSA---GYVASIFHLTTHAFFKALLFLA 344 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 +G+V+ T++++ + G+ K M T +LF G A++G+P F+ F S+ + A Sbjct: 345 AGSVIHAVHTQNIHEMGGLQKKMKVTGLLFLVGTFAISGVPFFSGFFSKDEILMATWMHG 404 Query: 418 HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGT 477 + ++ VL +L L + R+ V + + + T PM L V +A+G Sbjct: 405 NYVLFVLAILATFLTSFYMFRLYFLVFTGEERAKREVRESPRIMTLPMTALGVFAVAIGY 464 Query: 478 HIPQPVIRIL 487 L Sbjct: 465 IHTPWFGTFL 474 >UniRef50_A1JTZ4 Hydrogenase-4 component F n=19 Tax=Bacteria RepID=A1JTZ4_YERE8 Length = 545 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 352/521 (67%), Positives = 415/521 (79%), Gaps = 1/521 (0%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 MS + + LLL PL+ SLL FACR +A T +H GI+LLLI+AL VV A Sbjct: 1 MSNTDLLLLLLAIPLIASLLAFACRALGSAARMATTWVHFAGISLLLIVALTVVCRVAVG 60 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 GEI A WLHID L LFLAILGVIGF+TG+YS+GYMRHEV +GE++ TLC+YYGFFH Sbjct: 61 GEILAVHHWLHIDSLSALFLAILGVIGFITGLYSLGYMRHEVNNGEITVSTLCNYYGFFH 120 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 LFLFTMLLVVTSNNLI+MW IEATTLSSAFLVG+YGQRSSLEAAWKYIIICTVGVAFGL Sbjct: 121 LFLFTMLLVVTSNNLILMWVGIEATTLSSAFLVGLYGQRSSLEAAWKYIIICTVGVAFGL 180 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 +GTVLVYANAA+V+ AIFW+ V + + LDP+LM LAFVF+LIGFGTKTGLFPMH+ Sbjct: 181 YGTVLVYANAANVLADPSSAIFWTVVAEHAKELDPSLMHLAFVFILIGFGTKTGLFPMHS 240 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 WLPDAHSEAPSP SALLSAVLLNCALLV+IRYYIII AIG FP LLL+FGM+SVAV+ Sbjct: 241 WLPDAHSEAPSPTSALLSAVLLNCALLVIIRYYIIISAAIGPHFPQMLLLVFGMMSVAVS 300 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 AFFIL QRD+KRLLAYSSVENMGL+AV LGIGGPLG+ AAL H +NHSLAKTLLFCGSGN Sbjct: 301 AFFILAQRDMKRLLAYSSVENMGLIAVALGIGGPLGVLAALFHTMNHSLAKTLLFCGSGN 360 Query: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 VLLKYGTRD+ + G++++ P TAV+ GGALALAGMPPFN+F+SEFM + A + H+ Sbjct: 361 VLLKYGTRDMGAIKGIIRVAPLTAVMLAGGALALAGMPPFNVFISEFMVVAAAIKTGHIT 420 Query: 421 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIP 480 ++++LLLLLTLVLAGLVRM A ++ PP AV++G+LG LTT+PM ILL++ML +G HIP Sbjct: 421 LVIVLLLLLTLVLAGLVRMIASTVLGTPPTAVSKGELGILTTAPMAILLLLMLLLGVHIP 480 Query: 481 QPVIRILAGASTIVLSGTHDLPAQRSTWHDF-LPSGTASVS 520 PV R+L A+ IVL+ P Q + LPS +S Sbjct: 481 TPVTRLLTDAAQIVLNNDSRDPIQPPFMLPWQLPSPIKDIS 521 >UniRef50_A5UVF8 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Chloroflexaceae RepID=A5UVF8_ROSS1 Length = 654 Score = 375 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 133/531 (25%), Positives = 227/531 (42%), Gaps = 50/531 (9%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILA------------ 50 + + L+ PL+ LL +R +A +V+ L + Sbjct: 1 MNWIIWLIPAFPLIGFLLNALVVRRERAAGILASVMVGLSFAATIAAMVVLEGAPSGAKR 60 Query: 51 LWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPV 110 L F L D L + ++ +G L IYSIGYM + V Sbjct: 61 LTWTLWEWIGIADFRVAFGLLFDPLTAVMALLITGVGGLIHIYSIGYMHGD--------V 112 Query: 111 TLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-------E 163 ++ F +LF+F ML++V ++NL++++ E L S L+G Y R S+ E Sbjct: 113 RPVRFFAFMNLFVFAMLMLVMADNLLLLFLGWEGVGLCSFLLIGHYFDRRSVPPGINPSE 172 Query: 164 AAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDP-------- 215 AA K ++ VG A L ++ N ++ + S L Q+ ++ Sbjct: 173 AAVKAFVVNRVGDAAMLAALFAIFTNFGTLSFYDNPQLSISGYLDQAIVVAGETVDLGAF 232 Query: 216 ---TLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIR 271 LM + +L+ K+ FP++ WLPDA + P+PVSAL+ A ++ + +++R Sbjct: 233 GQLPLMTGITLLMLVAVAGKSAQFPLYTWLPDAMA-GPTPVSALIHAATMVTSGVYLIVR 291 Query: 272 YYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGI 331 + + Q + +L+ G+++ + A + Q DIKR+LAYS+V +G + +G+ Sbjct: 292 NHTLFDQPASAAPW---VLVIGVMTAFIGATAAVAQLDIKRVLAYSTVSQLGYMVAAVGM 348 Query: 332 GGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGG 390 G A + H+L H L K LLF +G+V+ G +D+ + G+ +P T L+ G Sbjct: 349 G---AYVAGMYHLLTHGLFKALLFLAAGSVIHGIGDHQDMRRMGGLRNALPTTFRLYVIG 405 Query: 391 ALALAGMPPFNIFLSEFMTI-TAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP 449 ALAL+G+ P F S+ I A L ++L+L + + R V +P Sbjct: 406 ALALSGIFPLAGFWSKDEIIAHAWFDARSPLAAIMLILTSAVTAFYMGRQIGMVFFGRPR 465 Query: 450 QA-VNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTH 499 ++ + G MV L + G I P + L VL Sbjct: 466 DPTIHGHESGAAMRWTMVALAGGAVVGGL-INLPGLHWLNSYLRPVLQEPE 515 >UniRef50_Q1IS43 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Bacteria RepID=Q1IS43_ACIBL Length = 676 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 113/553 (20%), Positives = 218/553 (39%), Gaps = 65/553 (11%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRT-VTVLHSLGITLLLILALWVVQTAAD 59 M ++ ++ L PL + + KR + + + + + Sbjct: 1 MDQNLHLWIIPLLPLAGAAINGLLGKRFPNKLVATIALFFTAASFGYFCYVASQFVHLSQ 60 Query: 60 AGEIFAAGLWL-----------HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 + + G W+ ++D L + L ++ +GFL +YS GYM HE + Sbjct: 61 IPHVESYGTWIQVGSFKVEFGAYLDQLTLIMLGVVTGVGFLIHVYSAGYMEHEGGYY--- 117 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWK 167 ++ + +LF+F ML +V ++ ++M+ E L+S L+G + ++ S+ +A K Sbjct: 118 -----RFFAYLNLFMFFMLTLVLGSSYLLMFVGWEGVGLASYLLIGFFFRKHSAAQAGKK 172 Query: 168 YIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLI 227 I VG L G L+ N ++ ++ + L + LLI Sbjct: 173 AFITNRVGDFGFLIGLFLIIQNWNTLQYTEVFKAASGYGVETHA----GLFTAIGICLLI 228 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPN 286 G K+ P++ WLPDA E P+PVSAL+ A ++ + ++ R I S Sbjct: 229 GACGKSAQIPLYVWLPDAM-EGPTPVSALIHAATMVTAGVYMVTRSNAIF---SRSPHAL 284 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 L+ G + AA + Q DIKR+LAYS++ +G + + G+G + + H++ Sbjct: 285 LLVACIGAATAIFAATIGITQTDIKRVLAYSTISQLGYMFLACGVG---AYASGVFHLMT 341 Query: 347 HSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 H+ K LLF +G+V+ G +D+ + G+ K +P+T + +AG PP F S Sbjct: 342 HAFFKALLFLAAGSVIHAVGGEQDMRNMGGLRKYIPWTFWVMTIATFTIAGFPPLAAFFS 401 Query: 406 EFMTITAGLARNHL----------LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV--- 452 + + + L + + L+ + + R + A Sbjct: 402 KDEILWKVWSSESLRPVVGEGFNKFLWAVGLITAGVTSFYMFRQWFMTFFGEYRGAKTEA 461 Query: 453 -----------------NRGDLGWLTTSPMVILLVMMLAMG-THIPQPVIRILAGASTIV 494 + + +P+V+L ++ A G I L+ + + Sbjct: 462 SHGHAPAHGAHDDHGHGEPHESPMIMIAPLVVLAILSFAGGWVGIHNKFDNFLSPVTKLQ 521 Query: 495 LSGTHDLPAQRST 507 ++ + Sbjct: 522 MANAPSAEESATP 534 >UniRef50_A3ERI6 NADH dehydrogenase (Quinone), chain L n=8 Tax=cellular organisms RepID=A3ERI6_9BACT Length = 639 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 118/499 (23%), Positives = 209/499 (41%), Gaps = 42/499 (8%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI--- 63 L+ L PL+ L+ VTV +L I A + Sbjct: 4 IVLIPLLPLIGFLIVGLFWPYFKGKGHWVTVPLVALSAVLSIRAFMDTLNGPPIHFVLYN 63 Query: 64 ------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 F+ + + ID L L ++ V+ L +Y++GYM+ + + ++ Sbjct: 64 WIHSGHFSVPISIMIDHLTAAMLVMVTVVSTLVHLYTVGYMKEDSGYD--------RFFS 115 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGV 176 + LF F M++++ S+NL+ ++ E S L+ + +R S AA K I+ +G Sbjct: 116 YISLFTFAMIVLLLSDNLLELFFGWEGVGFCSYILIVHWYERRPSWMAANKAFIMNRIGD 175 Query: 177 AFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQ-------SSLLDPTLMLLAFVFLLIGF 229 L G L Y ++ + S + S +++ + + L +G Sbjct: 176 FGFLLGIFLTYNVFGTLDYEGIFRAIPSHLHDTIFPFSVFHSTESASVLTVIALLLFVGA 235 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRL 288 K+ P+H WLPDA E P+P+SAL+ A ++ + ++ R I S + Sbjct: 236 VGKSAQIPLHPWLPDAM-EGPTPISALIHAATMVTAGIFMIARLSPIY---NASPTALMV 291 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 + G ++ VAA L QRDIK+++AYS++ +G + + G+G A + H+L H Sbjct: 292 VGWTGAITAFVAATIALTQRDIKKIVAYSTMSQLGYMVMACGVG---AYGAGIFHLLTHG 348 Query: 349 LAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 K LLF +G+V+ G +D+ + G+ K M T V G+LAL+G+PPF + S+ Sbjct: 349 FFKALLFLAAGSVIHSLNGEQDIFRMGGLSKYMKLTFVTMLLGSLALSGIPPFAGYFSKD 408 Query: 408 MTITAGLARNHL--LIIVLLLLLLTLVLAGLVRMAARVLMAKPP------QAVNRGDLGW 459 + ++ + + L+ L R+ V K + Sbjct: 409 LILSDAFQSGPRGQIFWAIGLITAVLTAFYTFRLIFMVFTGKENFSNDGHHGHAPHESPL 468 Query: 460 LTTSPMVILLVMMLAMGTH 478 + T P+VIL + G Sbjct: 469 VMTIPLVILSFGAVFAGWL 487 >UniRef50_D0LZ05 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=cellular organisms RepID=D0LZ05_HALO1 Length = 801 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 117/527 (22%), Positives = 203/527 (38%), Gaps = 65/527 (12%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSAT------RTVTVLHSLGITLLLILALWVV 54 M + + L PLL + + R + ++ +L + VV Sbjct: 1 MQPQDLIFWIPLLPLLGATFNLFVGRVLWRWAFKKELPRGLVHFAAVLPVVLACVVSIVV 60 Query: 55 QTAADAGEIFAA-----------------------------GLWLHIDGLGGLFLAILGV 85 L +D L + L ++ Sbjct: 61 IFVGSGSLFAQFQAFDATGNNLLEGLHQTLYTWIEIGTLKIDLAFRVDTLSSVMLLVITF 120 Query: 86 IGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEAT 145 IG L IYSIGYM HE Y+G+ +LF +ML++V ++L VM+ E Sbjct: 121 IGSLIHIYSIGYMEHEP--------RYAAYFGYLNLFTGSMLILVLGDSLPVMFIGWEGV 172 Query: 146 TLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWS 204 L S L+G + ++ +A K ++ VG L G L++ + + + Sbjct: 173 GLCSYLLIGFWFNETANADAGRKAFVVNRVGDFSFLIGMFLLFQMVGGLDYEVLRSDTAM 232 Query: 205 EVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLN 263 + + + A +FL IG K+ P++ WLPDA + P+PVSAL+ A ++ Sbjct: 233 SIYDNAFWGGERIAFWAGLFLFIGACGKSAQIPLYVWLPDAMA-GPTPVSALIHAATMVT 291 Query: 264 CALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMG 323 + ++ R + S ++ G L+ AAF Q D K++LAYS+V +G Sbjct: 292 AGVYMVARLSFLY---ASSTTAMIIVSTVGALTALAAAFMAFAQTDFKKVLAYSTVSQLG 348 Query: 324 LVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPF 382 + V +G+G A + H++ H+ K LF +G+V+ G+ D+ + G+ K MP Sbjct: 349 FMFVGVGVG---AYVAGVFHLITHAFFKAGLFLSAGSVMHAMSGSGDIMKMGGLRKYMPR 405 Query: 383 TAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH--------LLIIVLLLLLLTLVLA 434 T F LA+ G+ PF F S+ + + +L L Sbjct: 406 THGAFVVYWLAICGIVPFAGFFSKDEILAGAFFTTPQGWPPGYNYFLWAVLTLAALGTAF 465 Query: 435 GLVRMAARVLMAK----PPQAVNRGDLGWLTTSPMVILLVMMLAMGT 477 + R+ V + + + T P+++L V +G Sbjct: 466 YMSRLYFLVFSGECRADEETKAHIHESPPSMTWPLILLAVGTALVGF 512 >UniRef50_P50939 NADH-quinone oxidoreductase subunit L n=36 Tax=cellular organisms RepID=NUOL_RHOCA Length = 712 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 117/501 (23%), Positives = 207/501 (41%), Gaps = 37/501 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA-------- 57 M ++LL PLL +L+ + V L ++ +L +++ A Sbjct: 1 MTTIILLAPLLGALIGGFGWRLITEKGALVVTTGLLFLSCILSWVVFLTLPAETQHIHLL 60 Query: 58 -ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 + +D L + L ++ + L +YS GYM H+ + ++ Sbjct: 61 DWIRSGALDTSWGIRLDRLTAIMLIVVTTVSALVHLYSWGYMAHD-ENWTHHEAYKARFF 119 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVG 175 + F F ML++VTS+NL+ M+ E ++S L+G Y ++ S AA K ++ VG Sbjct: 120 AYLSFFTFAMLMLVTSDNLVQMFFGWEGVGVASYLLIGFYYKKPSANAAAIKAFVVNRVG 179 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLD--PTLMLLAFVFLLIGFGTKT 233 G + ++ S+ A + L L V L IG K+ Sbjct: 180 DFGFALGIMGLFFLTDSIDMDVIFASAPELAKTELHFLAWEFNAANLLAVLLFIGAMGKS 239 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 +H WLPDA E P+PVSAL+ A ++ + ++ R + A +++ Sbjct: 240 AQLFLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLVCRMSPLFEYA---PEAKMMVVYV 295 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G ++ AA LVQ DIKR++AYS+ +G + V G G A+ H+L H+ K Sbjct: 296 GAVTAFFAATVGLVQNDIKRVIAYSTCSQLGYMFVAAGSGV---YSVAMFHLLTHAFFKA 352 Query: 353 LLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALAL--AGMP---------PF 400 +LF G+G+V+ +D+ G+ K +PFT + G LA+ G+P F Sbjct: 353 MLFLGAGSVIHAMHHEQDMRNYGGLRKKIPFTFAIMMIGTLAITGVGIPFFSIGGVPVGF 412 Query: 401 NIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV----NRGD 456 +LS+ I + A + +L+ + R+ + + + Sbjct: 413 AGYLSKDAIIESAFASGNGFAFYVLVAAAGMTSFYSWRLIFLTFYGEARGDHHKHDHAHE 472 Query: 457 LGWLTTSPMVILLVMMLAMGT 477 + +P+ +L V + G Sbjct: 473 SPAVMLAPLALLAVGSVLAGM 493 >UniRef50_C1F220 NADH dehydrogenase I, L subunit n=2 Tax=Bacteria RepID=C1F220_ACIC5 Length = 687 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 128/547 (23%), Positives = 225/547 (41%), Gaps = 56/547 (10%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILA-----------L 51 + L+ P+L + L ++R + + LL ++A + Sbjct: 1 MLKLLWLIPALPMLAAALIALMPRQRRVPAAALAIGSLGISLLLSLVALVQTIANPVRQV 60 Query: 52 WVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 + + G L D L + L ++ +G L IYS+GYM H+ Sbjct: 61 YNFNWLQFGSQWVQLGWIL--DPLCAVMLVMVTFVGLLIFIYSLGYMAHDE--------N 110 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYII 170 ++ F LF ML VV +N+L++++ E L+S L+G + + S AA K I Sbjct: 111 FTRFFCFLALFAGAMLGVVLANSLLLLFMCWEIVGLTSYLLIGFWFHKPSAAAAAKKAFI 170 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMA-----IFWSEVLKQSSLLDPTLMLLAFVFL 225 +G L G V +YA++ +++ A + ++ Q++L + + L Sbjct: 171 TTRIGDLGLLLGMVWLYASSGTLLFYNNGAGCLEHSALAAMVTQTTLAGMAVSTAIALLL 230 Query: 226 LIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDF 284 G K+G P+H WLPDA E P+PVSAL+ A ++ + ++ R Y ++ A Sbjct: 231 FCGAAGKSGQVPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYLIARVYPLMAAAATPHT 289 Query: 285 ---PNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAAL 341 +++ G ++ AA + Q DIKR+LAYS+V +G + + LG+G G+ + Sbjct: 290 ISAALQVVAWVGAITAFFAACIAVAQNDIKRILAYSTVSQLGYMMLGLGVG---GVAIGM 346 Query: 342 LHILNHSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 H++ H+ K LLF G+G+V+ +D+ + G+ + MP T V + G LAL G P F Sbjct: 347 FHLITHAFFKALLFLGAGSVIHGCTEEQDIRNMGGLRRFMPITFVTYMCGMLALCGFPLF 406 Query: 401 NIFLSEFMTITAGLARN-HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV------- 452 F S+ + A L L L + R V Sbjct: 407 AGFWSKDEILHAAHGWPISLGPFYLGAAGALLTAFYMTRQVCYVFFGPRRLPEATADLSS 466 Query: 453 ----------NRGDLGWLTTSPMVILLVMMLAMGTH--IPQPVIRILAGASTIVLSGTHD 500 + + + T P+++L + + +G P ++ L T Sbjct: 467 PRPPEACVIRDPHESPAVMTVPLIVLALFAVLLGFISTPAWPWFSNFLISTRATLDLTRF 526 Query: 501 LPAQRST 507 A + Sbjct: 527 AAADLAM 533 >UniRef50_B2IHV5 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=cellular organisms RepID=B2IHV5_BEII9 Length = 666 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 127/526 (24%), Positives = 203/526 (38%), Gaps = 61/526 (11%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE--- 62 M A ++ PL L+ + + + L + LL +V A Sbjct: 1 MHAAIVFLPLAGFLIAGIFGRVIGARASEIVTTSLLFVAALLSWITFVQVGLGVAPARTE 60 Query: 63 ---------IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 L ID L + L ++ + L +YSIGYM + + Sbjct: 61 LLAPWFDSGALQVDWALRIDTLTAVMLVVVTTVSALVHLYSIGYMHEDPSR--------S 112 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIIC 172 ++ + F FTML +VT++NL+ M+ E L+S L+G + ++ S AA K + Sbjct: 113 RFFAYLSFFTFTMLTLVTADNLVQMFFGWEGVGLASYLLIGFWYEKPSACAAAIKAFVAN 172 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDP--TLMLLAFVFLLIGFG 230 VG L G LV+ SV A S K + M + + L +G Sbjct: 173 RVGDFGFLLGIFLVFLLTHSVSFDQVFAAAPSLAGKSLHVFGHDFDAMTITCLLLFMGAM 232 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ F +H WLPDA E P+PVSAL+ A ++ + ++ R + QA + Sbjct: 233 GKSAQFLLHTWLPDAM-EGPTPVSALIHAATMVTAGVFMVARLSPLFEQA---PVALSFV 288 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 I G + AA LVQ DIKR++AYS+ +G + V LG+G G + H+ H+ Sbjct: 289 TIIGATTAFFAATVGLVQNDIKRVIAYSTCSQLGYMFVALGVG---GYSLGIFHLFTHAF 345 Query: 350 AKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 K LLF G+G+V+ +D+ + + +PFT + G LAL G P + S+ Sbjct: 346 FKALLFLGAGSVIHAMHHEQDMRKMGALRDRIPFTFWMMTLGTLALTGFPLTAGYFSKDA 405 Query: 409 TITAGLAR---NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP----------------- 448 I A A L V ++ L R+ Sbjct: 406 IIEAAFASERTGALYGYVATVVAAGLTSFYSWRLVFMTFFGPAHWGADAHAAHDDHGHAH 465 Query: 449 ---------PQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIR 485 A+ + ++ P++IL + G I Sbjct: 466 ASGHDDHGHAHALEPHEPPFVMRLPLLILGAGAVFAGLLFDHSFIG 511 >UniRef50_Q1AVJ0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ0_RUBXD Length = 656 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 123/537 (22%), Positives = 226/537 (42%), Gaps = 40/537 (7%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVV---------- 54 ++ A + + PL+ + + + V + + + AL++V Sbjct: 8 LVIAAIPVIPLVVFFVLALFGRLLRENAQYVAIFGMVFSVVFSFFALYLVIRDGRPLEFS 67 Query: 55 QTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 + GE + ++ID L + L ++ + + +YS G+M + Sbjct: 68 VYWINLGEGGGFPIGVYIDELAAVMLVVVSFVSLMIQLYSGGFMAGD--------RRFAW 119 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICT 173 YY +LF +ML +V + N I ++ E L S L+G + ++ + AA K I+ Sbjct: 120 YYAVLNLFTASMLGLVVAPNFIELYICWELVGLCSYLLIGHWFEKPAARDAALKAFIVTR 179 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 +G A G ++ + + + Q+ + +L+ A V + +G K+ Sbjct: 180 IGDAALFVGIIMFWRATGTTAFEGIAE------AAQAGFIGGSLLTAAVVLVFVGAIGKS 233 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 FP+H WLPDA E P+PVSAL+ A ++ + ++ R Y I Q S ++ Sbjct: 234 AQFPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYLVARTYDIFVQ---SPTAMLIVAYI 289 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G + +AA LV++DIKR++AYS+V +G + + LG+G A + H+ NH+ K Sbjct: 290 GAFTAFMAATMALVKKDIKRVIAYSTVSQLGYMMLGLGVG---AFSAGMFHLYNHAFFKA 346 Query: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LLF +G+++ + +L + G+ + MP T L+LAG+ P F S+ I + Sbjct: 347 LLFLCAGSIIHAMDSYNLFEMGGLRRRMPLTFWTMVIAGLSLAGIFPLAGFWSKDAIIAS 406 Query: 413 GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRG--DLGWLTTSPMVILLV 470 ++ ++ L + + L + R +P + + T PMVIL V Sbjct: 407 AFEEHYYVLYALAIGTVFLTAFYIFRAIFLAFTGEPRTEGAARAVESPGVMTVPMVILAV 466 Query: 471 MMLAMGT-----HIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEK 522 + +A G PV G L + + L + + V Sbjct: 467 LSVASGWVGIPEGFGLPVRDYFGGFVAPSGFARETLEVEPHGFSFLLAAISVLVGLA 523 >UniRef50_A4E716 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E716_9ACTN Length = 521 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 232/521 (44%), Positives = 325/521 (62%), Gaps = 2/521 (0%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M S++ LL PL+FSL+ A K + S+ TL+L + + Sbjct: 1 MDVSMLTVALLACPLVFSLIMAALPKTTSYSVFAGLNTISVAATLVLSVVTAGTML-SSG 59 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 I A GLWLH+D L +F+ ++G+IGF+TG+YSI Y++ ++ + YY F Sbjct: 60 QNIDALGLWLHLDSLSSIFVLLVGIIGFITGVYSISYIKIDIKEKTMPAERTKQYYALFS 119 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 LF+FTMLL SNN+I+ WAA+EATTLS+ FLVGIY + +LEA+WKY ++CT GVAFGL Sbjct: 120 LFVFTMLLACLSNNIILTWAAVEATTLSTVFLVGIYKNKQALEASWKYAMVCTAGVAFGL 179 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 FGT+L+YANAA +MP A A F + ++ + DP L+ LAF F++IGFGTK GLFPMH Sbjct: 180 FGTLLIYANAADIMPNAHEAAFLTSIMPYADQFDPMLVRLAFAFIVIGFGTKAGLFPMHT 239 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 WLPDAHS+APSPVSALLS VLL CA+LV+IR+Y + +G +P LLLI G LS+ VA Sbjct: 240 WLPDAHSQAPSPVSALLSGVLLKCAMLVIIRFYSLSIITVGDTYPRTLLLILGTLSILVA 299 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 A I Q DIKR AYSSV+N+G+VA+ LGIGGPLGI A LLH + H K L FC +GN Sbjct: 300 ALCIFKQDDIKRRFAYSSVDNVGVVALCLGIGGPLGIAACLLHCIFHGFTKALAFCMAGN 359 Query: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 + Y TRDLN + G+++I P TA L LALA PPF +F+SEF+T AG+ + Sbjct: 360 IQHIYHTRDLNKIKGVVEIAPVTAALTIIALLALAAFPPFALFISEFLTFVAGIQSGPIW 419 Query: 421 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIP 480 ++VL+ + LT V L +A + + K P+ + R ++ L P + L ++++ G P Sbjct: 420 VVVLVAIGLTGVYFALTGIALKSIFGKAPEGMKRHEVPALMIIPEIALAIVVMWFGIATP 479 Query: 481 QPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSE 521 + + A+++VL+ + + + + + S SE Sbjct: 480 VAITSGVEDATSVVLNQSVE-ELHEAPLYRMVFSSQTKTSE 519 >UniRef50_C5QQQ5 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=2 Tax=Staphylococcus RepID=C5QQQ5_STAEP Length = 816 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 136/548 (24%), Positives = 247/548 (45%), Gaps = 55/548 (10%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAAD------- 59 + +L PL+F+L+ + VL + + ++L + + + Sbjct: 19 LHIAVLLPLIFALIIPILYRFVKRIHLGWFVLPVPIVLFIYFISLISITMSGNTVMKTLN 78 Query: 60 AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 F L++DGLG LF ++ IG L +YSIGY+ G +Y + Sbjct: 79 WMPHFGMNFNLYVDGLGLLFSLLITGIGSLVVLYSIGYLSKSEQLGN--------FYCYL 130 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVAF 178 LF+ ML VV S+NLI+++ E T+ SS L+ + ++ + + A K +I+ +G Sbjct: 131 LLFMGAMLGVVLSDNLIILYLFWELTSFSSFLLISFWREKKASIYGAQKSLILTVLGGLS 190 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 L G +L+ A + Q + K S + + +LA + ++IG TK+ P Sbjct: 191 LLGGIILLSLAADTFSIQTM-------IEKASEIQNSPYFILAMILVMIGAFTKSAQVPF 243 Query: 239 HAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSV 297 + WLPDA EAP+PVSA L A ++ L ++ R I S+ + + G++++ Sbjct: 244 YIWLPDAM-EAPTPVSAYLHSATMVKAGLYLVARMTPIF---AISEGWVWTITLVGLITL 299 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGP-------------LGIFAALLHI 344 A+ Q+D+K +LA+S+V +G++ LGIG G AA+ H+ Sbjct: 300 FWASLNATKQQDLKGILAFSTVSQLGMIMSMLGIGAVSYHYQGADSQLYVAGFVAAIFHL 359 Query: 345 LNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 +NH+ K LF +G V GTR++ + G+L IMP + + AL++AG+PPFN FL Sbjct: 360 INHATFKGALFMITGGVDHATGTRNVKKLGGLLTIMPISFTMTIITALSMAGVPPFNGFL 419 Query: 405 SEFMTITAGLARNH----------LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA--- 451 S+ + A + H ++ ++ ++ ++ + K Sbjct: 420 SKEKFLEAMIDVTHADLMSLNTLGIIFPIIAIVGSIFTFVYSIKFIMHIFFGKYKPDSLP 479 Query: 452 VNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDF 511 + + L +IL ++++ G I+ A+ V S T + A+ +H Sbjct: 480 KSAHESSMLMLLSPIILTILVVVFGLFPSILTQSIIEPATQAV-SQTTGITAEFHLFHGI 538 Query: 512 LPSGTASV 519 P+ +++ Sbjct: 539 TPAFISTL 546 >UniRef50_Q5FC98 NADH-quinone oxidoreductase chain L n=18 Tax=Rickettsiales RepID=Q5FC98_EHRRW Length = 641 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 119/494 (24%), Positives = 214/494 (43%), Gaps = 27/494 (5%) Query: 2 SYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG 61 + L +L PL+ S+ R + V + S + + + D Sbjct: 19 FMIKIELLCVLLPLIGSVFANIISHRFFAQLCAVFFITSSSLLSWYLFFNFQNSYIIDLF 78 Query: 62 EI-----FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 L++D L + L I+ + + IYSIGYM H+V + Sbjct: 79 SWIQVYDLKIHWSLYLDSLSIIMLVIVNTVSVVVHIYSIGYMSHDVGA--------ARFL 130 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVG 175 + LF F ML++VTS N + ++ E L S L+G + ++SS +AA K II VG Sbjct: 131 SYLSLFTFFMLILVTSGNFLQLFLGWEGVGLCSYLLIGFWFEKSSATKAAMKAFIINRVG 190 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQS----SLLDPTLMLLAFVFLLIGFGT 231 F + G + V+ S+ + + + + V L IG Sbjct: 191 DFFFILGIIAVFLVFDSLDFARVFHSIVNSDYRIGIINFFGYQVPYIDVICVLLFIGCMG 250 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ +H WLPDA E P+P SAL+ A ++ + +++R + SD +L Sbjct: 251 KSAQIGLHTWLPDAM-EGPTPASALIHAATMVTAGVFLVVRCSPLFE---LSDVARHFIL 306 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 I G ++ AA +VQ D+K+++AYS+ +G + + G+ A+ H++ H+ Sbjct: 307 IVGTITCLFAATIAIVQTDLKKIIAYSTCSQLGYMFLACGLS---AYSVAIFHLMTHAFF 363 Query: 351 KTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 K LLF +GN++ +D+ + + +PFT VL G+LALAG+ PF F S+ + I Sbjct: 364 KALLFLCAGNIIHSTHEQDIYKIRASWRQIPFTYVLTWIGSLALAGIFPFAGFYSKDLII 423 Query: 411 TAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLV 470 + ++ ++ ++ L R+ V + + + G + P+++L V Sbjct: 424 ESSYNVSNT-AFIISNIVAFLTAFYSWRLIIIVFHGIDSEKKSIFESGKVMLLPLLVLSV 482 Query: 471 MMLAMGTHIPQPVI 484 + G + ++ Sbjct: 483 GSIFSGMWGEKVLL 496 >UniRef50_C4V3R7 NADH dehydrogenase (Quinone) n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V3R7_9FIRM Length = 634 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 117/491 (23%), Positives = 212/491 (43%), Gaps = 35/491 (7%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 + + + L L F ++ R+ + + V+ +L + +AL V G+ Sbjct: 6 LTHAYLIPLFPALAFLIIAPFTRREKNLSATIAIVMMALAFAFSVFVALAAVNYQITMGD 65 Query: 63 IF------------AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPV 110 + + + ID L L L I+ ++ L IYS+ YM H+ G Sbjct: 66 PYVMKTVWAHIGAVELSMGVLIDPLTALMLVIVTLVSLLVYIYSVSYMEHDEGMG----- 120 Query: 111 TLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYI 169 ++ F LF ML +V S N + ++ E L S L+G Y + S+ EAA K Sbjct: 121 ---RFFAFISLFSAAMLGLVVSVNFLQLYVFWEGVGLCSYLLIGFYYDKVSAREAAKKAF 177 Query: 170 IICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGF 229 I +G L G +LV + ++ + + VL + + + + L +G Sbjct: 178 ITTRIGDFGMLVGILLVQVSFGTMDFIELRLMMPAYVLVAGT----GYLTVIGLLLFMGP 233 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRL 288 K+G FP+H WL DA E P+P SAL+ A ++ + ++ R + I + Sbjct: 234 IGKSGQFPLHVWLLDAM-EGPTPTSALIHAATMVAAGVFLVARAFFIFSEC---PLVMNF 289 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 + G + AA + QR K +LAYS++ +G + + +GIG A++ H++ H+ Sbjct: 290 IAGLGAFTALFAAVIAVTQRRFKAVLAYSTISQLGYMMLAVGIG---AFSASMFHLMTHA 346 Query: 349 LAKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 K +LF +G V+ D+ + G+ K MP T V G LA++G+PPF+ F S+ Sbjct: 347 FFKAMLFLCAGAVMHALHDETDITKMGGLWKKMPLTFVTMLIGVLAISGIPPFSGFFSKD 406 Query: 408 MTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVI 467 + A + + L ++ L + R+ + + ++ PM++ Sbjct: 407 EILAAAMHASTPL-YLMATFTSFLTAFYMARLLIVAFLGESRSEHEAHEVDAFMRWPMIM 465 Query: 468 LLVMMLAMGTH 478 L ++ + G Sbjct: 466 LALLTIVSGLW 476 >UniRef50_D2BHY2 NADH:quinone oxidoreductase subunit 5 (Chain L) n=5 Tax=Dehalococcoides RepID=D2BHY2_DEHSV Length = 654 Score = 370 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 126/492 (25%), Positives = 219/492 (44%), Gaps = 39/492 (7%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWV---------VQTA 57 L++L PL+ L L G+ L+L++W V Sbjct: 6 LWLIMLLPLICGALIAMGYAFFCKKPALSGYLGIAGVGGSLLLSIWGLTGLLGKEGVSHY 65 Query: 58 ADAGEIFAAG------LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 A F+ G L L+ D L G+ ++ + + IYS GYM + + Sbjct: 66 ASGFSWFSIGNSVDISLNLNFDPLAGIMCFVILFVSLMVHIYSQGYMHGDKGY------- 118 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKY-II 170 YY F F +ML +V S+NL+ + E L+S L+G + R + A K I Sbjct: 119 -PRYYAFLSFFTASMLGLVLSDNLLFTFFFWELVGLASYLLIGFWFTRPAAANAAKKAFI 177 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 + +G L ++++AN ++ + + + + + +A + + G Sbjct: 178 VTRIGDVGFLAAILILFANTGTLDINSL------NGMAEMGFIGAGTVTVAALGIFAGAV 231 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ FP+H WLPDA E P+PVSAL+ A ++ + ++ R Y I + + + Sbjct: 232 GKSAQFPLHVWLPDAM-EGPTPVSALIHAATMVAAGVFLVARTYPIFESSATAMLW---V 287 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 I G ++ AA LV D+KR+LAYS+V +G + + LG G GI + H+ NH+ Sbjct: 288 SIIGAVTAIFAATMALVMNDMKRILAYSTVSQLGYMMLGLGTG---GIAIGIFHLFNHAF 344 Query: 350 AKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 K+LLF GSG+V GT D+ + G+ K MP T+ F +L+LAG+ P + F S+ Sbjct: 345 FKSLLFLGSGSVNHATGTFDIREMGGLSKPMPVTSKTFLIASLSLAGIWPLSGFFSKDEI 404 Query: 410 ITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILL 469 + + +++ +L L+ + L + R+ + + + + P++IL+ Sbjct: 405 LAGAMD-GQVILFILALITVFLTAFYMFRLYFVAFGGTYRGKGHPHESPKVMSWPLLILV 463 Query: 470 VMMLAMGTHIPQ 481 V + G Sbjct: 464 VPSVISGLLNAG 475 >UniRef50_B9DJY9 Putative NADH dehydrogenase I chain L n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DJY9_STACT Length = 824 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 126/522 (24%), Positives = 228/522 (43%), Gaps = 53/522 (10%) Query: 26 KRRLSATRTVTVLHSLGITLLLILALWVV------QTAADAGEIFAAGLWLHIDGLGGLF 79 K + + ++ + L + + + I +DGL +F Sbjct: 49 KPFARFSGWIALIAPILSALYFVFKISQTADSKITSVSLPWMPIIDLDFAFRLDGLSMIF 108 Query: 80 LAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMW 139 ++ +IG +Y+ Y+ E L +Y + LF+F ML VV ++N I+++ Sbjct: 109 ALLITLIGTGVVLYANAYLSKEHDD-------LPRFYFYLILFMFAMLGVVLADNTILLY 161 Query: 140 AAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAE 198 E T+++S L+ + R + + A K +I G F L G +++Y+ + + Sbjct: 162 VFWELTSIASFLLISYWYNRKASQNGALKSFLITVFGGMFMLIGFIIIYSISGTNTISEL 221 Query: 199 MAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS 258 V + +L A V +LIG TK+ FP H WLPDA EAP+PVSA L Sbjct: 222 -------VTQTDTLRSSPWFPFAVVCILIGAFTKSAQFPFHIWLPDAM-EAPTPVSAYLH 273 Query: 259 -AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYS 317 A ++ L +L R+ I+ A + +++ G++++AV +F + QRD+K LLAYS Sbjct: 274 SATMVKAGLYLLFRFTPILSYA---SWVGYIVITVGIITLAVGSFVAVGQRDLKALLAYS 330 Query: 318 SVENMGLVAVELGIGG-------------PLGIFAALLHILNHSLAKTLLFCGSGNVLLK 364 ++ +G++ +G G + +FA L H++NH+L K++LF G+G + + Sbjct: 331 TISQLGMIMSMVGFGMLTYSLHKSFVEFFVISLFAGLFHLINHALFKSVLFMGAGIIDHE 390 Query: 365 YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL----- 419 GTR+L + G+ K++P TA + A+A+AG+P FN FLS+ M T + L Sbjct: 391 TGTRNLADLGGLRKLLPVTATIMTISAMAMAGLPFFNGFLSKEMFFTTLVNGRKLPIDDQ 450 Query: 420 ----LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRG---DLGWLTTSPMVILLVMM 472 +++++ + L +RM + VI++ + Sbjct: 451 IFMSIMLIIAIGASVLTFVYSLRMIKDTFFGPLNKEKLPHVPGHEPIGMYIAPVIIVCGL 510 Query: 473 LAMGTHIPQPVIRILAGASTIVLSG--THDLPAQRSTWHDFL 512 +++ A + + WH F Sbjct: 511 PLFFIIPNILGKYLISPALRDINHTVVVEKYIPHITAWHGFT 552 >UniRef50_C6VXR9 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Bacteria RepID=C6VXR9_DYAFD Length = 639 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 130/534 (24%), Positives = 227/534 (42%), Gaps = 55/534 (10%) Query: 16 LFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI------------ 63 + L+ + ++ + +L + + AA + Sbjct: 15 VGFLINGIGFPNIPKGAVGIIGTLAVVASFVLSVMTFNAFVAAGSQPFVLPLFDWITVGD 74 Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 ID L L L I+ +G L IYSIGYM H+ G+ ++ + +LFL Sbjct: 75 LHIPFSFQIDQLSLLMLMIITGVGSLIHIYSIGYMHHDSGFGK--------FFAYLNLFL 126 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVGVAFGLFG 182 F MLL+V +N ++M+ E L S L+G + + ++ AA K I+ VG L G Sbjct: 127 FFMLLLVLGSNYVIMFIGWEGVGLCSYLLIGFWNKNTNYNNAARKAFIMNRVGDLGFLLG 186 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 + A SV + + +++ +FL +G K+ P++ WL Sbjct: 187 IFTIIATFGSVEYTEVFSK-----AAAGFQVGDPVIITITLFLFVGAMGKSAQIPLYTWL 241 Query: 243 PDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 PDA + P+PVSAL+ A ++ + ++IR ++ A + ++ I G + AA Sbjct: 242 PDAMA-GPTPVSALIHAATMVTAGIYMVIRSNVLYSLAPST---LEIVGIIGGATALFAA 297 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 L+Q DIK++LAYS+V +G + + LG A++ H++ H+ K LLF G+G+V Sbjct: 298 SIGLLQNDIKKVLAYSTVSQLGYMFMGLGAM---AYSASMFHVITHAFFKALLFLGAGSV 354 Query: 362 LLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 + +D+ + G+ K +P T + F +A++G+PPF F S+ + N +L Sbjct: 355 IHAMSDEQDIRSMGGLRKKLPVTFLTFLIATIAISGIPPFAGFFSKDEILAHVFEHNKIL 414 Query: 421 IIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLGWLTTSPMVILLVMMLAMG 476 V+ +L + + R+ Q + + T P++IL ++ A G Sbjct: 415 W-VIGVLGSVMTSFYMFRLLFLTFFGTFRGTHEQEHHLHESPASMTVPLIILAILSAAGG 473 Query: 477 THIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFL----PSGTASVSEKHSER 526 L G+H L + +D P+ A S HSE Sbjct: 474 FI-----------GVPEALHGSHQLAQFMAPLYDLAKTANPAAFAHTSLSHSEE 516 >UniRef50_Q3J3E6 NADH dehydrogenase I chain L n=72 Tax=cellular organisms RepID=Q3J3E6_RHOS4 Length = 720 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 118/519 (22%), Positives = 206/519 (39%), Gaps = 33/519 (6%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF- 64 M ++LL PLL +L+C + V + + LL +++ + Sbjct: 1 MATIILLAPLLGALICGFGWRLIGERAGQVIATALVFLAALLSWIIFLGFDGEMYQVVLL 60 Query: 65 --------AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 + + +D L + L ++ + L +YS GYM H+ + ++ Sbjct: 61 RWIESGSLSTEWAIRVDRLTAIMLVVVNTVSALVHLYSFGYMAHDD-NWNHHEHYKARFF 119 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVG 175 + F F ML +VTS+NL+ M+ E ++S L+G Y ++ S AA K ++ VG Sbjct: 120 AYLSFFTFAMLTLVTSDNLVQMFFGWEGVGVASYLLIGFYYRKPSANAAAIKAFVVNRVG 179 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLL--DPTLMLLAFVFLLIGFGTKT 233 G + ++ S+ A + L + L V L IG K+ Sbjct: 180 DFGFALGIMALFFLVDSIRFDDVFAAGPELAQTNLTFLWTEWNAANLIGVLLFIGAMGKS 239 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 +H WLPDA E P+PVSAL+ A ++ + ++ R + A ++++ Sbjct: 240 AQLGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLVCRMSPLYEFAPD---AKTMIVVV 295 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G + AA LVQ DIKR++AYS+ +G + V G+G AA+ H+ H+ K Sbjct: 296 GATTAFFAATVGLVQNDIKRVIAYSTCSQLGYMFVAAGVGV---YSAAMFHLFTHAFFKA 352 Query: 353 LLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALAL--AGMP----PFNIFLS 405 +LF G+G+V+ +D+ G+ +P T G LA+ G+P F FLS Sbjct: 353 MLFLGAGSVIHAMHHEQDMRNYGGLRSKIPLTFWAMMIGTLAITGVGIPLTHIGFAGFLS 412 Query: 406 EFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ----AVNRGDLGWLT 461 + I + + LL++ R+ K + + + Sbjct: 413 KDAIIESAWVGSGYAFW-LLVVAACFTSFYSWRLIFLTFFGKERGDHHAHDHAHESPTVM 471 Query: 462 TSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHD 500 P+ +L + G +T H Sbjct: 472 LIPLGVLALGAAFSGMIWYNSFFGDHNKVATWFGIPHHA 510 >UniRef50_Q3AH00 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=Chroococcales RepID=Q3AH00_SYNSC Length = 669 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 124/568 (21%), Positives = 232/568 (40%), Gaps = 74/568 (13%) Query: 6 MFALLLLTPLLFSLLCFAC------RKRRLSATRTVTVLHSLGITLLLILALWVVQ---- 55 + L+ + PL ++L RL + ++ +G L ++ Q Sbjct: 7 LAWLIPVLPLFGAVLTGLGLISFNRTINRLRKPVALLLISCVGAAAALSYSILFNQLNGA 66 Query: 56 ------TAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSP 109 + F + +D LG + LA++ I L +YS GYM H+ + Sbjct: 67 PPVEHLFVWASAGSFILPMGYVVDPLGAVMLALVTTIALLVLVYSHGYMAHDKGY----- 121 Query: 110 VTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKY 168 ++ + LF +ML ++ S NL+ ++ E + S LVG + R + AA K Sbjct: 122 ---VRFFTYLALFSSSMLGLIISPNLLEIYVFWELVGMCSYLLVGFWYDRDGAAHAAQKA 178 Query: 169 IIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIG 228 ++ VG L G + ++ S Q + + + + P LL + + +G Sbjct: 179 FVVNRVGDFGLLLGILGLFWATGSFDFQGIADGLQNGLA--AGTVAPWAALLLCLLVFMG 236 Query: 229 FGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNR 287 K+ FP+H WLPDA E P+P+SAL+ A ++ + ++ R + Q Sbjct: 237 PMAKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARLDPLYAQ---FPVVQT 292 Query: 288 LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNH 347 ++ + G ++ + A L Q D+K+ LAYS+V +G + + +G G P+ + H++ H Sbjct: 293 VIAVVGTITCFLGASIALTQMDLKKGLAYSTVSQLGYMMLAMGCGAPVA---GIFHLVTH 349 Query: 348 SLAKTLLFCGSGNVLLKYGT---------RDLNVVCGMLKIMPFTAVLFGGGALALAGMP 398 + K +LF GSG+V+ +D+ ++ G+ K MP T++ F G +A++G+P Sbjct: 350 AFFKAMLFLGSGSVIHAMEEVVGHEPVLAQDMRLMGGLRKKMPVTSITFFIGCIAISGIP 409 Query: 399 PFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP--------- 449 P F S+ + + L+ V+ L + + R+ + Sbjct: 410 PLAGFWSKDEILGQAFNS-YPLLWVVGFLTAGMTAFYMFRLYFLTFEGEFRGNDTAMQAQ 468 Query: 450 --------------QAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVL 495 + + W +P+ +L V + +G R +L Sbjct: 469 LLSAAGKDPSEHHAHGGSVHESAWPMAAPLAVLAVPSVLIGLLGTPWNSRF-----AGLL 523 Query: 496 SGTHDLPAQRST-WHDFLPSGTASVSEK 522 + L W +FLP +ASV+ Sbjct: 524 NPEEALEMAEHFSWGEFLPLASASVAIS 551 >UniRef50_C7MLM5 Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=4 Tax=Bacteria RepID=C7MLM5_CRYCD Length = 533 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 245/507 (48%), Positives = 333/507 (65%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M +S + L+ PL+ L + + + ++ VV A Sbjct: 1 MDFSALLLTLIAVPLVAGLFMAVLPSKAVPRVAYEAIHLLSVTAACVLSLAVVVHVMAGG 60 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 + A G+WLH+D LG +F+A++GVIGFLTG+YS+ Y+R++VA G ++ + +Y FF Sbjct: 61 KPVDALGMWLHLDALGSVFVALIGVIGFLTGLYSVPYVRNDVAIGHMNNARVKQFYLFFS 120 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 LF+FTML+V TSNN+I+MW IEATTLS+ FLVG Y + SLEAAWKY+I+CT GVAFGL Sbjct: 121 LFIFTMLVVATSNNIILMWVGIEATTLSTVFLVGAYDAKLSLEAAWKYVIVCTAGVAFGL 180 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 + TVL+YANAA VM AIF + ++ ++ LD L+ +AFVF IGFGTK GLFPMH Sbjct: 181 YSTVLIYANAADVMANPHEAIFMTSIMPYATQLDGMLVQVAFVFAAIGFGTKAGLFPMHT 240 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 WLPDAHSEAPSPVS LLS VLL CA+L+++R+YI+ CQ+IGS FP ++LI G+LSV +A Sbjct: 241 WLPDAHSEAPSPVSGLLSGVLLKCAMLIIMRFYILACQSIGSQFPRLVMLIIGILSVFMA 300 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 A + Q D+KR LAY S EN+G+VA+ LG GGPLGI AALLH + H K LLFC SGN Sbjct: 301 ALAVFSQDDLKRKLAYHSCENVGIVALFLGFGGPLGIAAALLHCITHGFTKALLFCISGN 360 Query: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 VL+KYGTRDLN + G+LK MP T VL G ALAG PPF +F+SE ITAG+ Sbjct: 361 VLMKYGTRDLNKISGILKTMPATGVLMSIGFFALAGFPPFAMFVSEITGITAGVIEGQWF 420 Query: 421 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIP 480 +IV+ ++ LT+V+A + + +M K P+ + +GD+ + P V+L+ ++L G +P Sbjct: 421 VIVVFVIALTIVVAACAHVVTQAVMGKVPEGMKKGDVSPVALIPEVVLVALILWFGVAMP 480 Query: 481 QPVIRILAGASTIVLSGTHDLPAQRST 507 QPV+ + A+ IVL + Sbjct: 481 QPVLNGIEQATAIVLQQDDTAALHEAP 507 >UniRef50_A1ALQ0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALQ0_PELPD Length = 639 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 122/512 (23%), Positives = 217/512 (42%), Gaps = 42/512 (8%) Query: 22 FACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGL------ 75 R + ++ L+ L L+ A W+ +D L Sbjct: 19 GLFGNRLPRWVVSTIACGLPALSFLVTLVLYSSLVATGQPIAETLYTWVALDPLNVDVAF 78 Query: 76 -----GGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVV 130 + ++ +G L +YS+GYM H+ Y+ + +LFLF ML++V Sbjct: 79 YLDQASAVMCLVVTGVGTLIHLYSVGYMSHDED--------QPRYFAYLNLFLFFMLMLV 130 Query: 131 TSNNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 N+I+++A E L+S L+G + A K I+ VG + +L+++ Sbjct: 131 LGKNMIMLFAGWEGVGLASYLLIGFWYQDDEKSAAGMKAFIVNRVGDTGFVLAALLIFSY 190 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 + ++ Q A F ++ L + M L + LLIG K+ P+H WLPDA + Sbjct: 191 SHTLDFQGINAYF------GTAGLPVSTMNLIGILLLIGACGKSAQIPLHVWLPDAMA-G 243 Query: 250 PSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQR 308 P+PVSAL+ A ++ + +L R ++ QA G ++++ G L+ V A L Q Sbjct: 244 PTPVSALIHAATMVTAGVYLLSRMNGVLLQAPG---AMQVVMWGGALTAFVGATMGLTQY 300 Query: 309 DIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK-YGT 367 ++K++LAYS++ +G + + G+G AA+ H+ +H+ K LF G+G VL +G Sbjct: 301 NLKKVLAYSTMSQIGYMFMACGLGS---FSAAMFHLYSHAFFKACLFLGAGAVLHALHGE 357 Query: 368 RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR---NHLLIIVL 424 D+ + G+ K MP T V F G+LAL G+PPF F S+ + + A + ++ Sbjct: 358 EDMRKMGGLAKKMPLTFVTFLAGSLALCGVPPFAGFFSKDEILWSAFASAHGGSTALWLV 417 Query: 425 LLLLLTLVLAGLVRMAARVLMAKPPQAVNR----GDLGWLTTSPMVILLVMMLAMGTHIP 480 + + + R + + + ++IL V +A G Sbjct: 418 GAVAAGMTSFYMFRAIIMTFFGQDNVPAKLKHGIHEPPFSMAIVLIILGVSSVAAGFIGL 477 Query: 481 QPVIRILAGASTIVLSGTHDLPAQRSTWHDFL 512 V+ G + S + + Sbjct: 478 PQVLADKFGFGSPFFSFLEPVFGHHALKAGVT 509 >UniRef50_Q9RGZ5 Na(+)/H(+) antiporter subunit A n=9 Tax=Firmicutes RepID=MRPA_BACPF Length = 805 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 139/557 (24%), Positives = 230/557 (41%), Gaps = 58/557 (10%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLL-----LILALWVVQTAAD 59 + ++P L ++L K VL + + L + Sbjct: 2 TVLHWATISPFLLAILIPFLYKYARRIHTGWFVLVLPLVLFIYFIQYLSITSTGGVVEHT 61 Query: 60 AGEIFAAGLWL--HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 + + G+ +DGL LF ++ IG L +YSI Y+ + +L ++Y Sbjct: 62 IPWVPSLGINFTVFVDGLSLLFALLITGIGTLVILYSIFYLSKKTE-------SLNNFYV 114 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGV 176 + +F+ ML VV S+NLIV++ E T+L+S+ L+ + R S A K ++I G Sbjct: 115 YLLMFMGAMLGVVLSDNLIVLYVFWELTSLASSLLISYWFHREKSTYGAQKSMLITVFGG 174 Query: 177 AFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLF 236 L G L+Y + + + L L A + +L+G TK+ F Sbjct: 175 FAMLGGFSLLYVMTGTFSIRGIIENVDLV-------TSSELFLPAMILVLLGAFTKSAQF 227 Query: 237 PMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGML 295 P H WLPDA EAP+PVSA L A ++ + ++ R + GS LL FG++ Sbjct: 228 PFHIWLPDAM-EAPTPVSAYLHSATMVKAGIYLVARLTPVF---AGSAEWFWLLTGFGVV 283 Query: 296 SVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGP--------------LGIFAAL 341 ++ + + Q+D+K +LA+S+V +GL+ LG+G I AA+ Sbjct: 284 TLLWGSTSAVRQKDLKGILAFSTVSQLGLIMTLLGLGSAAIYFGESVDPAFYSFAIMAAI 343 Query: 342 LHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFN 401 H++NH+ K LF +G + + GTRD+ + G++ IMP T + G ++AG+PPFN Sbjct: 344 FHLINHATFKGSLFMTAGIIDHETGTRDIRKLGGLMAIMPVTFTVSLIGLASMAGLPPFN 403 Query: 402 IFLSEFMTITAGLARN----------HLLIIVLLLLLLTLVLAGLVRMAARVL---MAKP 448 FLS+ M TA L ++I+VL + + M + Sbjct: 404 GFLSKEMFFTALLRATEMNAFNMETFGIIIVVLAWIASVFTFLYCLIMFFKTFTGKFKPE 463 Query: 449 PQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRS-- 506 V + VIL +++ G I+ A VL Sbjct: 464 NYDVKVHEAPIGMLISPVILGSLVIVFGFFPNILAYTIIEPAMQAVLPTVLADGELFHVN 523 Query: 507 --TWHDFLPSGTASVSE 521 WH F ++ Sbjct: 524 IYMWHGFNAELFMTMGV 540 >UniRef50_C6HUH6 NADH dehydrogenase (Quinone), chain L n=2 Tax=Bacteria RepID=C6HUH6_9BACT Length = 643 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 118/486 (24%), Positives = 211/486 (43%), Gaps = 38/486 (7%) Query: 16 LFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI----FAAGLWLH 71 + F K A VT+ ++ I G+ L Sbjct: 18 VGIFWPFFKGKGHFVALPLVTISWAIATVEFFKSFSAPPSLTLVYDWIRSGHLDVGISLQ 77 Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 D L + L ++ + L +Y++GYM + + ++ + LF F+M+++V Sbjct: 78 YDHLAAVMLFMVTTVAMLVHLYTVGYMHGDSGYD--------RFFAYISLFTFSMIMLVL 129 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVAFGLFGTVLVYANA 190 S+NL+ M+ EA L S L+ + + R S AA K I+ VG L G L Y Sbjct: 130 SDNLVEMFIFWEAVGLCSYLLIVHWYERRPSWLAANKAFIMNRVGDFGFLLGIFLAYTVF 189 Query: 191 ASVMPQAEMAIFWSEVLKQSSLL-------DPTLMLLAFVFLLIGFGTKTGLFPMHAWLP 243 SV S + + +L + ++ + + L +G K+ P+H WLP Sbjct: 190 GSVRFAEIFPAIGSHLHQSVNLAAVFHGSWNVPVLDVIALLLFLGAVGKSAQIPLHPWLP 249 Query: 244 DAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAF 302 DA E P+P+SAL+ A ++ + ++ R + + F ++ G ++ VAA Sbjct: 250 DAM-EGPTPISALIHAATMVTAGVFMIARMNPLY---NAAPFALHVVAWTGAITAIVAAT 305 Query: 303 FILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVL 362 L Q DIK+++AYS++ +G + + G+G G A + H+L H K LLF G+G+V+ Sbjct: 306 IALTQPDIKKIVAYSTMSQLGYMVMICGLG---GYGAGIFHLLTHGAFKALLFLGAGSVI 362 Query: 363 LKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL-- 419 G +D+ + G+ K + T G+LAL+G+PPF + S+ + + + L Sbjct: 363 HSLSGEQDVFRMGGLRKYVGLTFATMLIGSLALSGIPPFAGYYSKDLILVTAYQQGPLGQ 422 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLMAKPP-------QAVNRGDLGWLTTSPMVILLVMM 472 ++ ++ +L L R+ V K AV+ + T P+++L + Sbjct: 423 MLWLIGVLTAVLTAFYSFRLLFLVFGGKERFHSESQGHAVHPHESPLTMTIPLLVLSIAT 482 Query: 473 LAMGTH 478 + G Sbjct: 483 VFAGWA 488 >UniRef50_A4GYW4 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=5090 Tax=Embryophyta RepID=NU5C_POPTR Length = 760 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 106/465 (22%), Positives = 200/465 (43%), Gaps = 39/465 (8%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL------------W 52 ++ + L P+L + R L ++++++ ++ + Sbjct: 10 IISFVTLPVPMLIGMGLLLFPVSTKKLHRIWAFPSVLLLSIVMVFSIDLFIQQINSSSIY 69 Query: 53 VVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 + F+ ID L + L ++ +G L +YS YM H+ + Sbjct: 70 QYVWSWTINNDFSLEFGYLIDPLTSILLILITTVGILVLVYSDSYMSHDQGYL------- 122 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIII 171 ++ + F +ML +VTS+NLI ++ E + S L+G + R + A K + Sbjct: 123 -RFFVYMSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIVSNACQKAFVT 181 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 VG L G + +Y S Q IF + + + + + L L G Sbjct: 182 NRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLIYNNDNEVHFLFVTLCAFLLFSGAIA 241 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ FP+H WLPDA E P+P+SAL+ A ++ + ++ R + + + +L+ Sbjct: 242 KSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGIFLVARLLPLF---VVIPYIMKLIA 297 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 + G+++V + A Q+DIKR LAYS++ +G + LG+G AAL H++ H+ + Sbjct: 298 LIGIITVLLGATLAFAQKDIKRGLAYSTMSQLGYTMLALGMGS---YRAALFHLITHAYS 354 Query: 351 KTLLFCGSGNVLLKY---------GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFN 401 K LLF GSG+++ ++++ ++ G+ K +P T + F G L+L G+PP Sbjct: 355 KALLFLGSGSIIHSMEVIVGYSPDKSQNMVLMGGLTKHVPITKIAFLLGTLSLCGIPPLA 414 Query: 402 IFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA 446 F S+ + + ++ L + R+ Sbjct: 415 CFWSKDEILNDSW-SYSPIFAIIAFSTAGLTAFYMFRVYLLTFEG 458 >UniRef50_B2A3T0 NADH dehydrogenase (Quinone) n=2 Tax=Clostridia RepID=B2A3T0_NATTJ Length = 500 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 122/507 (24%), Positives = 220/507 (43%), Gaps = 32/507 (6%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQ-----TAADA 60 + L++L PL+ + + F ++ + ++V+ S L++ VV A Sbjct: 10 LPMLIVLFPLIMTGVIFLVEQKSIFGRNLLSVVTSAITFLMVAAMYPVVIKGEVIYYQLA 69 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 I G+ +D LG + I L IYS+ YM+ E G YY Sbjct: 70 NLIPPFGISFMVDTLGFGLSLLASFIWMLVTIYSLEYMKKENYTG--------RYYPALS 121 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 L L + + + +L M+ E +L S L+ + +L A +KY+I+ +G F Sbjct: 122 LTLSGSMGLFLAGDLFTMFIFFEIMSLVSYLLIIHNETKEALRAGYKYLIVTIIGGLFLF 181 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 FG ++ + + ++ I +L F+ +IGFG K G+ P+H Sbjct: 182 FGIIITFELSQTITLSEMGIIS----------TPTSLAFAGFLSFVIGFGMKAGMVPLHI 231 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIIC--QAIGSDFPNRLLLIFGMLSVA 298 WLP+AH APSP SALLS +++ LIR + Q I + +L + ++++ Sbjct: 232 WLPEAHPVAPSPASALLSGIMIKTGAYGLIRIMFHVFDYQMILEANWHLILAVVAVITIF 291 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 + + + Q D+KR LAYSS+ MG + + L I + + HI +H+ K+ LF + Sbjct: 292 LGSAVAITQEDLKRRLAYSSIGQMGYILLGLAILTETAMTGDIFHIFSHAFMKSTLFLAA 351 Query: 359 GNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH 418 G +++K G + + + G+ + MP T + F ALA+ G+PP N F+S++ L Sbjct: 352 GAMIMKTGKKKIADLKGVGRAMPLTMLSFTIAALAMIGIPPLNGFISKWSLSLGALEAGQ 411 Query: 419 LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVN-------RGDLGWLTTSPMVILLVM 471 +V+LL+ + + + K + + + P+ IL Sbjct: 412 PYYVVILLISSLMNSVYYLPIINTAYFGKSEETDDDVESKGVISEAPMKMVMPVAILGFS 471 Query: 472 MLAMGTHIPQPVIRILAGASTIVLSGT 498 L + + A+ +++G Sbjct: 472 CLILSLFPTNIPYELAQLAAKALINGN 498 >UniRef50_Q67NV3 Na+/H+ antiporter subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67NV3_SYMTH Length = 754 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 145/497 (29%), Positives = 235/497 (47%), Gaps = 24/497 (4%) Query: 27 RRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVI 86 R L V +T +L++ + L +H+DG G LF ++ I Sbjct: 7 RWLRWRLGVAATAVAAVTFVLVVLTPEMSLVIPWVPQLGIDLSIHVDGWGRLFALLIAGI 66 Query: 87 GFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATT 146 G L +YSI Y+ L +Y + LF+ ML VV + NL++M+ E T+ Sbjct: 67 GTLVVLYSIPYLGARED--------LGKFYAYLLLFMGAMLGVVYAGNLMLMYVFWELTS 118 Query: 147 LSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSE 205 +SS L+G + R + A K I+I G L G ++ + A +A Sbjct: 119 ISSFLLIGFWNTRDDAQYGALKAILITFGGGLCMLGGLAILGTVGGTFELSALLA----- 173 Query: 206 VLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNC 264 KQ+ LL L+ +A V LLIG TK+ FP H WLPDA + AP+PVSA L A ++ Sbjct: 174 --KQAELLGHPLVTVALVLLLIGAFTKSAQFPFHIWLPDAMA-APTPVSAYLHSATMVKA 230 Query: 265 ALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGL 324 L ++ R + I ++ GM+++ V +F + + D+K +LA S++ +GL Sbjct: 231 GLYLIGRLWPIFHTH---PLWVPVVAAVGMVTMVVGSFLAVQKTDLKAVLALSTISQLGL 287 Query: 325 VAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTA 384 + G+G P AA H+LNHS K LLF G + + GTR++ ++ G+ + MP +A Sbjct: 288 IMWLFGLGTPEATQAAAFHLLNHSTFKALLFMVVGIIDHQTGTREIPLLSGLRRAMPVSA 347 Query: 385 VLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLL-LTLVLAGLVRMAARV 443 L GA ++AG+P N FLS+ M +TA + L+ L + + ++ Sbjct: 348 GLAMVGAASMAGVPLLNGFLSKEMFLTAVHGSSMGAAGALVATGASLLTTLYCLILGHKI 407 Query: 444 LMAKPPQAVNRGDLG-WLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLP 502 +P + + + G P ++L V+++A+G + I+ A VL G DLP Sbjct: 408 WFGEPHETPDVPEEGSPSILVPPLLLAVIIVAVGIYPGLVESAIVTPAVAAVLQGPADLP 467 Query: 503 AQRSTWHDFLPSGTASV 519 + WH F P+ + Sbjct: 468 -HIALWHGFTPALLMTA 483 >UniRef50_B3PW10 NADH-ubiquinone oxidoreductase protein, chain L n=51 Tax=cellular organisms RepID=B3PW10_RHIE6 Length = 666 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 112/518 (21%), Positives = 209/518 (40%), Gaps = 59/518 (11%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQT--------- 56 ++ ++ PL+ +++ + + + I +L ++ Sbjct: 3 LYKAIVFLPLIGAIVAGLFGRAIGAKASEYVTSGLMIIAAILSWYVFFTVGMGHAEGGPI 62 Query: 57 -AADAGEIFAAGL----WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 I + G+ L +D L + L ++ + L +YSIGYM + Sbjct: 63 KVEVLRWIQSGGIDVSWSLRVDTLTSVMLVVVNTVSMLVHVYSIGYMHTDPHR------- 115 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYII 170 ++ + LF F ML++VT++NL M+ E L+S L+G + ++ S AA K I Sbjct: 116 -PRFFAYLSLFTFAMLMLVTADNLAQMFFGWEGVGLASYLLIGFWFKKPSATAAAMKAFI 174 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTL------------- 217 + VG + G V+ ++ A + + + Sbjct: 175 VNRVGDFGFVLGIAGVFVLFGAINLDTIFANASNFAPHEGGGEAGEVILNLFGMQLDKAH 234 Query: 218 -MLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYII 275 + + L +G K+ F +H WLPDA E P+PVSAL+ A ++ + ++ R + Sbjct: 235 ALTGVCLLLFMGAMGKSAQFLLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLVARMSPL 293 Query: 276 ICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPL 335 + ++ + G ++ AA LVQ DIKR++AYS+ +G + V LG+G Sbjct: 294 FELSPD---ALTVVTVIGAITAFFAATVGLVQNDIKRVIAYSTCSQLGYMFVALGVG--- 347 Query: 336 GIFAALLHILNHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALAL 394 AA+ H+ H+ K LLF +G+V+ G +D+ + G+ + T + G LA+ Sbjct: 348 AYGAAIFHLFTHAFFKALLFLCAGSVIHAVDGEQDMRYMGGLRPHIKVTFWMMIIGTLAI 407 Query: 395 --AGMP----PFNIFLSEFMTITAGLARNHL---LIIVLLLLLLTLVLAGLVRMAARVLM 445 G+P F F S+ + I A A + LL++ R+ Sbjct: 408 TGVGIPFTPIGFAGFFSKDVIIEATYASHSPVSGFAFSLLVIAALFTSFYSWRLIFMTFF 467 Query: 446 AKPPQA----VNRGDLGWLTTSPMVILLVMMLAMGTHI 479 KP + + + + P+ +L + + G Sbjct: 468 GKPRASHEVMHHVHESPQVMLVPLYLLAIGAVFAGVIF 505 >UniRef50_C0JX69 Subunit 5 of NADH-plastoquinone oxidoreductase n=1 Tax=Pyramimonas parkeae RepID=C0JX69_9CHLO Length = 642 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 120/502 (23%), Positives = 212/502 (42%), Gaps = 47/502 (9%) Query: 5 VMFALLLLTPLLFSLLCFAC------RKRRLSATRTVTVLHSLGITLLLILALWVVQTAA 58 L+ + PL + + + L + LGI+++ LA++ Q Sbjct: 7 HYAWLIPVFPLFSATVMGLGLISFQKATQSLRRDLAFFTIFLLGISVIFSLAIFFFQYNG 66 Query: 59 DAGEI----------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 + F+ + ID L L ++ + FL IY+ GYM ++ + Sbjct: 67 NGSYQWEMEWVVSQNFSLEMGYLIDPLSSTMLVVVSTVAFLVMIYTDGYMNYDQGY---- 122 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWK 167 ++ + LF +ML +V S NL+ ++ E L S L+G + R+ + +A K Sbjct: 123 ----VRFFSYLSLFTASMLGLVLSTNLVQVYIFWELIGLCSYLLIGFWFTRTTAGDACQK 178 Query: 168 YIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLI 227 I +G L G + Y S S + L+ L + L + Sbjct: 179 AFITNRMGDFGLLLGILGFYWLTKSFHFNEIAFRLESLLQVDPKLIPLG--TLFAILLFL 236 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPN 286 G +K+ FP+H WLPDA E P+P+SAL+ A L+ + ++ R + I Q Sbjct: 237 GPISKSAQFPLHVWLPDAM-EGPTPISALIHAATLVAAGVFLVGRMFPIFDQ---FPIVM 292 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 + G L+ + A Q D+K+ LAYS+V +G + + +G+G A L H++ Sbjct: 293 STIAWTGCLTAFLGATIATTQVDLKKGLAYSTVSQLGYMMMAMGVGS---YSAGLFHLIT 349 Query: 347 HSLAKTLLFCGSGNVLLKYG---------TRDLNVVCGMLKIMPFTAVLFGGGALALAGM 397 H+ +K LLF GSG+ + +++N + G+ K MP TA+ F G L++ G Sbjct: 350 HAYSKALLFLGSGSAIHGMEGAVGFSPYINQNMNQMGGLRKKMPITAITFLIGTLSICGF 409 Query: 398 PPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA--KPPQAVNRG 455 PPF F S+ ++ N ++ + L L + R+ + P Sbjct: 410 PPFACFWSKDAILSDLFQAN-PILWLFAWLTAGLTSFYMFRIYFLTFEGTFRGPNISLVK 468 Query: 456 DLGWLTTSPMVILLVMMLAMGT 477 + G + P+++L + L +G Sbjct: 469 ESGPMMLFPLIVLTIPTLILGL 490 >UniRef50_B6YQ51 NADH dehydrogenase I subunit L n=32 Tax=Bacteroidetes RepID=B6YQ51_AZOPC Length = 637 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 118/505 (23%), Positives = 218/505 (43%), Gaps = 45/505 (8%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL---------------W 52 L+++ P + + S + + I + W Sbjct: 4 LLIIIVPFVLFFVLGLLGTNLKSNISGIIGTGGMSICTFTAYVMAYQYFFRIGKKGEGVW 63 Query: 53 VVQTAADAGEIFAAG-----LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGEL 107 D + G L + +D + + L ++ + + IYS+GYM+ E+ Sbjct: 64 KEIVPLDFQWLHFMGEMHINLGVLLDPISVMMLVVITTVSLMVHIYSLGYMKGEIG---- 119 Query: 108 SPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAW 166 YY F LF F+ML +V + N+ M+ E +SS L+G Y + S++ A+ Sbjct: 120 ----FQRYYAFLSLFSFSMLGLVVATNIFQMYIFWELVGVSSYLLIGFYYIKPSAVAASK 175 Query: 167 KYIIICTVGVAFGLFGTVLVYANAASVMPQAEMA---IFWSEVLKQSSLLDPTLMLLAFV 223 K I+ L G +++ + +A A + + + L ++ + A Sbjct: 176 KAFIVTRFADLGFLIGILILSYYTRTFDFRALTANNAVLVTASTAGRTFLGLSVSVWALA 235 Query: 224 FLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGS 282 + +G K+ +FP+H WLPDA E P+PVSAL+ A ++ + ++ R + + + Sbjct: 236 LIFMGGAGKSAMFPLHIWLPDAM-EGPTPVSALIHAATMVVAGVYLITRLFPVYF--FAA 292 Query: 283 DFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGP-----LGI 337 +++ G + A +VQ DIKR+LA+S++ + + LG+ LG Sbjct: 293 PSVLKMIAFVGAFTSFFTAIIAVVQTDIKRVLAFSTISQISYMMAALGVSKYGGYEGLGY 352 Query: 338 FAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGM 397 A++ H+ H+ K LLF G+G+V+ + ++N +CG+ K MP T + F LA+AG+ Sbjct: 353 TASMFHLFTHAFFKALLFLGAGSVIHVVNSNEMNNMCGLHKYMPITNITFLIACLAIAGI 412 Query: 398 PPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ---AVNR 454 PPF+ F S+ + A L +I +L ++ L + R+ + + Sbjct: 413 PPFSGFYSKDEVLVATLHY-QPIIFWILWVVAGLTAFYMFRLYFCIFWNGEKKYDIYHAS 471 Query: 455 GDLGWLTTSPMVILLVMMLAMGTHI 479 + +L P+VIL V + G Sbjct: 472 HESPFLMIFPLVILSVFSVFGGLIP 496 >UniRef50_Q8R9B0 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit n=2 Tax=Thermoanaerobacteraceae RepID=Q8R9B0_THETN Length = 673 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 137/537 (25%), Positives = 238/537 (44%), Gaps = 46/537 (8%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSA----TRTVTVLHSLGITLLLILALWVVQT 56 M+ +F L + ++ +L+ + A T + G+ + + + Sbjct: 2 MTVQQLFLLSIFLYVVGALISLGLNRDGKIANYVSGTTAFLAGCTGVASAVPVLIEGKGF 61 Query: 57 AADAGEIFAAG-LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 + E G +++D L ++ ++ TG+YSI Y + G L Sbjct: 62 ILEGMEFIPFGRFTINVDPLSAFMTLVISLLSIATGVYSISYQEEYIGKGTGVMGFLN-- 119 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTV 174 ++F+ +M+LVVTS+N E TL S FLV + R +++A + Y ++ V Sbjct: 120 ----NIFIVSMILVVTSDNAFYFLVFWELMTLVSYFLVCFEQENREAIKAGFVYFVMAHV 175 Query: 175 GVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 G + +L Y + A +++ L P + LAF+ +GFG K G Sbjct: 176 GTVLIMISFILFYVYTGTFDFAAF----------RNANLSPVIKNLAFLLAFLGFGVKAG 225 Query: 235 LFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 + P H WLP AH APS VSAL+S V++ A+ +IR + A + + +L FG Sbjct: 226 IVPFHFWLPQAHPAAPSNVSALMSGVMIKTAIYGIIRVGVDFLGA-ATWWWGLTVLAFGA 284 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLH 343 +S + + + D+KRLLAYSS+EN+G++ + +G G G LGI A L H Sbjct: 285 ISAVFGVLYAVSENDLKRLLAYSSIENVGIILMGVGAGMMGIATGYVSVGILGILAGLYH 344 Query: 344 ILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 ++NH++ K LLF G+G+V+ + TR++ + G+ + MP+T + F GAL+++ +PP N F Sbjct: 345 LINHAVFKGLLFLGAGSVVYRLHTRNMEEMGGLARYMPWTGLTFFIGALSISALPPLNGF 404 Query: 404 LSEFMTITAGLARN----------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ--A 451 +S++ T A + L V L L L V+ Sbjct: 405 VSKWFTYHTLFAVSTKGSVLIRMAFPLAAVALALTGALTSLCFVKAYGVTFTGPFRGGNE 464 Query: 452 VNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTW 508 + ++ M +L + +G P I AS ++ + + S + Sbjct: 465 LKIKEVPVTMLIGMGLLAIGCFVLGLGAPVGAGYIANVASALLHVSSPKVSDGLSIF 521 >UniRef50_A6TVL4 NADH dehydrogenase (Quinone) n=2 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVL4_ALKMQ Length = 694 Score = 366 bits (940), Expect = 1e-99, Method: Composition-based stats. Identities = 123/534 (23%), Positives = 218/534 (40%), Gaps = 46/534 (8%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQT---A 57 +++ + L+++ PL+ + K+ + V + LL++ V Sbjct: 84 LNFKALPLLVIMIPLVGGPIEAYIGKKSENLRDMAVVDTTFVTLLLVLAMYPQVAQGEMY 143 Query: 58 ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 ++ GL +D L + A GV+ FL IY+ YM E +Y Sbjct: 144 YHLPKLLGYGLSFKVDMLSFIMAATAGVLWFLVSIYAHDYMGIENHRN--------RFYL 195 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVA 177 + + +L V + +L M+ E T SS FLV + S+ A YI + G Sbjct: 196 WMSVTFGGILGTVMAGDLFTMFLFFEIMTFSSYFLVAHNQSKESILAGNSYIYMGVAGGL 255 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L G +L+YA ++ + + L + GFG K G+ P Sbjct: 256 SILLGMILLYAYTGTLEFIPLASEIKDL---------GWVKYLMTGLFVGGFGIKAGMLP 306 Query: 238 MHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNR---------- 287 +H WLP AH AP+P SALLS +L+ ++R I ++ Sbjct: 307 LHIWLPKAHPVAPTPASALLSGILIKVGAYGILRVSISFFVPSITEISGYADSLWEVSQK 366 Query: 288 ---LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAAL--- 341 +++ G++++ V F L Q ++K++LAY S+ MG + + +G+ LG A+ Sbjct: 367 LGAVIIWIGIITMVVGVFMALQQSNMKKMLAYHSISQMGYIVMGIGVATYLGYKGAMGFS 426 Query: 342 ---LHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMP 398 H++NH+L K LLF G V L+ D+ + GM + MPFTA L AL + GMP Sbjct: 427 GGIYHMVNHALFKALLFMVVGLVYLRTHELDMYKLGGMWRKMPFTAFLCIIAALGITGMP 486 Query: 399 PFNIFLSEFMTITAGLARNHL------LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV 452 FN F S+ + A + ++ ++ + +++ + V + K P+ Sbjct: 487 GFNGFASKSILHHAIIEAYEYGHPSFRYAEMIFTVVSAGTVCSFIKLFSFVFLGKCPEKY 546 Query: 453 NRGDLGWLTT-SPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQR 505 + M L +M++A+G + + + A+ + Sbjct: 547 KDIEGEKGMMDLAMGGLALMIIAVGQVPNFMMDKFIIPAARTFTYDPAFIDKYL 600 >UniRef50_C6D5D4 Proton-translocating NADH-quinone oxidoreductase, chain L n=82 Tax=Bacillales RepID=C6D5D4_PAESJ Length = 625 Score = 365 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 131/519 (25%), Positives = 227/519 (43%), Gaps = 39/519 (7%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALW-----------VVQT 56 L+ L P LL A + A + + SL ++ +L Sbjct: 9 WLIPLFPFASFLLLTALGRSYRLAGVLIGSIGSLASLVMSLLVFIERLGPNAVDYSGDSY 68 Query: 57 AADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 + + I L L L I+ V+ FL +YS GYM+ + + +Y Sbjct: 69 KWIGLGEYTLKIGFEITNLNALMLVIVTVVSFLVNVYSAGYMKKDE--------RITVFY 120 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKY-IIICTVG 175 G+ LF F ML +V S+N++V + E + S LVG + + + AA K I+ +G Sbjct: 121 GYVALFTFAMLGLVLSDNMLVFYMFWELVGVCSFLLVGFWYAKPAARAAAKKAFIVTRIG 180 Query: 176 VAFGLFGTVLVYAN--AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 A L G ++++ ++ + +F QS + T+ + L +G K+ Sbjct: 181 DAGLLLGIIVLFWYMPGHALDFSSIHNVFTEG---QSGTITMTITTSIALLLFMGVIGKS 237 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 G FP+H WLPDA E P+P+SAL+ A ++ + +L R + I S + F Sbjct: 238 GQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLLARTFDIFE---ASASAMHTVAYF 293 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G + AA L Q DIKR+LAYS++ +G + + +G+G + + H+ H+ K Sbjct: 294 GGFTAIFAATVALAQNDIKRILAYSTISQLGYMVMAMGLGS---MTGGVFHLFTHAFFKA 350 Query: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LLF +G+V+ T++++ + G+ M TA F GAL+L+G+PPF+ F S+ + + Sbjct: 351 LLFLAAGSVIHAVHTQNIHEMGGLGSKMRITAWTFAIGALSLSGIPPFSGFWSKDAILAS 410 Query: 413 GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP--QAVNRGDLGWLTTSPMVILLV 470 L N + + L + R+ V M K Q + + T P+++L V Sbjct: 411 ALDEN-PFLFAVGLAAAFCTALYMSRLFFIVFMGKSRLQQPAEVKESSKVMTIPLLVLAV 469 Query: 471 MMLAMGTH---IPQPVIRILAGASTIVLSGTHDLPAQRS 506 + + G + L + V + + A + Sbjct: 470 ISVGAGFIETPWNGWLGSWLTDGAEEVHASGAAIVASIA 508 >UniRef50_A6TVL5 NADH dehydrogenase (Quinone) n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVL5_ALKMQ Length = 498 Score = 365 bits (938), Expect = 2e-99, Method: Composition-based stats. Identities = 126/475 (26%), Positives = 225/475 (47%), Gaps = 16/475 (3%) Query: 26 KRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGV 85 + + + +L ++LL+ + T G+ +D L ++ Sbjct: 31 GFKWEMMGVLGLAWALSLSLLIFVLRDQSFTYTFGQWNPTIGIEFVVDEFSALMTLVVLS 90 Query: 86 IGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEAT 145 + L IYS+ + HE + YY L LF+M+ ++ +N+L ++ +E Sbjct: 91 VATLIIIYSLKDIEHE-----ILKEQFFSYYTLIFLLLFSMIGMIFTNDLFNLYVFMEIL 145 Query: 146 TLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSE 205 +L+S ++ I ++ +L A++KY+++ +G L G L+Y + A E Sbjct: 146 SLTSCGIISIKRKKENLMASFKYLMLGAIGSVSILMGIALLYMVTGHLNMTAAY-----E 200 Query: 206 VLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCA 265 V+ Q P +L+A F+L GFG K +FP+H WLPDAHS AP+P SALLS +++ Sbjct: 201 VITQVWQSYPRNILIALGFILTGFGIKAAIFPLHIWLPDAHSNAPTPSSALLSGLVVKVY 260 Query: 266 LLVLIRYYIIICQAIGSDFPNR--LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMG 323 + + + + + F +LS+ + + F + Q DIKRLLAYSSV +G Sbjct: 261 VFAIAKILFRVLGQDIVQSIGVTEFITYFAVLSMIMGSVFAIGQTDIKRLLAYSSVAQIG 320 Query: 324 LVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFT 383 + + LG+ LG A L H++ H+L K+ LF +G ++ + G RD+ + G+ MP T Sbjct: 321 YIFLGLGLATELGFSAGLFHVITHALMKSALFLSAGAIIYQTGKRDIRDLDGIGYQMPIT 380 Query: 384 AVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARV 443 +F AL + G+P N F+S++ A L + + ++++L+ L + + Sbjct: 381 MGVFSVAALGMIGIPGLNGFMSKWYLSLAVLEADKPVFLIMILISSFLNAIYYLPIIIAA 440 Query: 444 LMAKPPQAVNR---GDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVL 495 + + + N L PMVI+ + + MG P V+ ++ A L Sbjct: 441 FLKESNERDNVMVLDRLPKTMMYPMVIIAIGCVVMG-FFPHIVMDVVERAVPTFL 494 >UniRef50_A9B6Y2 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B6Y2_HERA2 Length = 683 Score = 365 bits (938), Expect = 2e-99, Method: Composition-based stats. Identities = 120/497 (24%), Positives = 211/497 (42%), Gaps = 34/497 (6%) Query: 15 LLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDG 74 L+ S++ ++ + + + V A ID Sbjct: 64 LIASVMVGLGFVLTVATLIELLGMPAKTTLGENNRWFDVTYWNWMAFGDLEVPFGFLIDQ 123 Query: 75 LGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNN 134 L + ++ +G L +Y++GYM H+ ++ + +LF+ ML++V NN Sbjct: 124 LSVTMMLLVTGVGTLIHLYAVGYMSHDE--------RPTRFFVYLNLFIVAMLMLVMGNN 175 Query: 135 LIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASV 193 ++++ E L S L+G + + R A+ K + VG L ++A A Sbjct: 176 FVMLFLGWEGVGLCSFLLIGFWFEQRDPPWASVKAFVTNRVGDFGLLMAMFAIWALARKP 235 Query: 194 MPQAEMAIFWSEVLKQSSLLDP------------TLMLLAFVFLLIGFGTKTGLFPMHAW 241 ++ + EVL+Q ++ T LL+G K+ P+ W Sbjct: 236 DGTFLHSLVFREVLEQGTVFSLQQYSTFFMGTQYTAAGAIAFMLLLGVTGKSAQIPLFVW 295 Query: 242 LPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 LPDA + P+PVSAL+ A ++ + ++IR + I S + G+ + VA Sbjct: 296 LPDAMA-GPTPVSALIHAATMVTAGVYLMIRTHPIFE---LSPAVQSSVTFIGVATALVA 351 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 A L Q DIK++LA+S+V +G + +G+G AA+ H+L H + K LLF GSG+ Sbjct: 352 ASIALGQYDIKKVLAFSTVSQLGFMVAAVGMG---AYVAAMFHLLTHGIFKALLFLGSGS 408 Query: 361 VLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 V+ +G +D+ + G+ K MP T + G + L G P + F S+ I +H Sbjct: 409 VIHGFGNEQDMRKMGGLRKKMPVTFWTYIVGTMGLIGFPLVSGFWSKDEIIGHAFDHDHR 468 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ-AVNRGDLGWLTTSPMVILLVMMLAMGTH 478 + +LL+L L + R + V + ++ + T P+ IL V+ LA G Sbjct: 469 TVGMLLILGAVLTSFYMGRQISMVFFGEQRDQHIHAHESSRWMTIPLAILAVLTLASGLI 528 Query: 479 ---IPQPVIRILAGAST 492 + P+ L Sbjct: 529 NIVVLHPLTTWLEPIVE 545 >UniRef50_B0SZ37 Proton-translocating NADH-quinone oxidoreductase, chain L n=7 Tax=Alphaproteobacteria RepID=B0SZ37_CAUSK Length = 694 Score = 365 bits (937), Expect = 3e-99, Method: Composition-based stats. Identities = 110/553 (19%), Positives = 206/553 (37%), Gaps = 85/553 (15%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 + +L+L PL+ +++ +R +L ++ L ++ T Sbjct: 1 MQTLVTILVLAPLVAAIIAGLFGRRIGDVASQAITTGALILSCALGWYVFSQWTWGHMEA 60 Query: 63 I------------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPV 110 F + + ID L + L ++ + L +YS GYM + Sbjct: 61 FTVDLLPFIHVGNFVSNWSIRIDALSAVMLIVVTTVSALVHVYSWGYMAEDPDK------ 114 Query: 111 TLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYI 169 ++ + LF F ML +VT+ + + ++ E L+S L+G + ++ + AA K Sbjct: 115 --PRFFAYLSLFTFAMLALVTAADFMQLFFGWEGVGLASYLLIGFWYKKPTASAAAVKAF 172 Query: 170 IICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDP--TLMLLAFVFLLI 227 ++ VG G + + ++ + + + L+ +A L + Sbjct: 173 VVNRVGDFGFALGIMTTFWAYGTIQFHELFPLIAASAPRTWEFAGHVFPLVDIACFLLFV 232 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPN 286 G K+ F +H WLPDA E P+PVSAL+ A ++ + +L + A Sbjct: 233 GAMGKSAQFFLHTWLPDAM-EGPTPVSALIHAATMVTAGVYMLCLLSPMFEYA---PIAK 288 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 ++ + G ++ AA L Q DIKR++AYS+ +G + GIG AA+ H+ Sbjct: 289 NIVTVIGAITALFAATVGLTQNDIKRVIAYSTCSQLGYMFFAAGIG---AYQAAMFHLFT 345 Query: 347 HSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGM--PP---- 399 H+ K LLF G+G+V+ +D+ + K++P T + G +A+ G+ PP Sbjct: 346 HAFFKALLFLGAGSVIHGMHHEQDMRKYGALTKLLPVTFIAMTIGTIAITGLGFPPLHLG 405 Query: 400 FNIFLSEFMTITAGLARNH-----LLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----- 449 F F S+ I A A L ++ +L+ L R+A K Sbjct: 406 FAGFYSKDTIIEAAFAAGQANSTALFAWIIGVLVAGLTSFYSWRLAFFTFNGKARWGHDD 465 Query: 450 -------------------------------------QAVNRGDLGWLTTSPMVILLVMM 472 + + P+++L + Sbjct: 466 HHAHDAHSAHGHEDLVHDETHDEPLADDHAHDDHRHGHDHKPHESPLVMLVPLIVLSIGA 525 Query: 473 LAMGTHIPQPVIR 485 + G + Sbjct: 526 VFAGFLFTDYFVG 538 >UniRef50_Q2FZV1 Na(+)/H(+) antiporter subunit A1 n=72 Tax=Bacillales RepID=MNHA1_STAA8 Length = 801 Score = 365 bits (937), Expect = 3e-99, Method: Composition-based stats. Identities = 132/549 (24%), Positives = 236/549 (42%), Gaps = 55/549 (10%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALW-------VVQTAA 58 + + ++ PL+F+L+ + VL + + +L L V Sbjct: 3 LLHIAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTL 62 Query: 59 DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 + F L++DGLG LF ++ IG L +YSIGY+ G +Y + Sbjct: 63 NWMPHFGMNFDLYLDGLGLLFSLLISGIGSLVVLYSIGYLSKSEQLGN--------FYCY 114 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVA 177 LF+ ML VV S+N+I+++ E T+ SS L+ + +R + + A K +II G Sbjct: 115 LLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQKSLIITVFGGL 174 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L G +L+ S Q + S + + + A + ++IG TK+ FP Sbjct: 175 SLLGGIILLAIPTQSFSIQYM-------IQHASEIQNSPFFIFAMILIMIGAFTKSAQFP 227 Query: 238 MHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 + WLPDA EAP+PVSA L A ++ L ++ R I S + + G+++ Sbjct: 228 FYIWLPDAM-EAPTPVSAYLHSATMVKAGLYLIARMTPIF---AASQGWVWTVTLVGLIT 283 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGG-------------PLGIFAALLH 343 + A+ Q+D+K +LA+S+V +G++ LGIG AA+ H Sbjct: 284 LFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAISYHYQGDDSKIYAAAFTAAIFH 343 Query: 344 ILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 ++NH+ K LF +G V GTRD+ + G+L IMP + + AL++AG+PPFN F Sbjct: 344 LINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITVITALSMAGVPPFNGF 403 Query: 404 LSEFMTITAGLARNH----------LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA-- 451 LS+ + + L ++ ++ ++ + + Sbjct: 404 LSKESFLETTFTASQANLFSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQL 463 Query: 452 -VNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHD 510 ++ L IL +++ G I+ A++ + + T + +H Sbjct: 464 PKKAHEVSILMLLSPAILATLVIVFGLFPGILTNSIIEPATSSI-NHTVIDDVEFHMFHG 522 Query: 511 FLPSGTASV 519 P+ +++ Sbjct: 523 LTPAFLSTL 531 >UniRef50_B3Q7M3 Proton-translocating NADH-quinone oxidoreductase, chain L n=3 Tax=Rhodopseudomonas palustris RepID=B3Q7M3_RHOPT Length = 697 Score = 365 bits (937), Expect = 3e-99, Method: Composition-based stats. Identities = 115/467 (24%), Positives = 198/467 (42%), Gaps = 30/467 (6%) Query: 34 TVTVLHSLGITLLLILALWVVQTAADAGEI----FAAGLWLHIDGLGGLFLAILGVIGFL 89 + +TL+ + + A I L +D L + L ++ + L Sbjct: 92 LLISCALSWVTLVEVGFMHHDSRVALLPWINSGELQVAWALRVDTLTAVMLVVVTTVSSL 151 Query: 90 TGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSS 149 +YSIGYM + ++G+ LF F ML++VT++NL+ ++ E L+S Sbjct: 152 VHLYSIGYMHEDPHR--------PRFFGYLSLFTFAMLMLVTADNLLQLFFGWEGVGLAS 203 Query: 150 AFLVGIYGQRSSL-EAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLK 208 L+G + Q+ S AA K ++ VG L G ++ S + S K Sbjct: 204 YLLIGFWYQKPSANAAAIKAFVVNRVGDFGFLLGIFTIFVLVGSTDFDTIFSAAPSLTGK 263 Query: 209 QSSLL--DPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCA 265 + + LA + L +G K+ F +H WLPDA E P+PVSAL+ A ++ Sbjct: 264 TINFFGWHADALTLACLMLFMGAMGKSAQFLLHTWLPDAM-EGPTPVSALIHAATMVTAG 322 Query: 266 LLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLV 325 + ++ R + A +++ FG + AA LVQ DIKR++AYS+ +G + Sbjct: 323 VFMVARMSPLFELAPN---AQAVVMFFGATTAFFAATIGLVQNDIKRIVAYSTCSQLGYM 379 Query: 326 AVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTA 384 V +G G + H+ H+ K LLF G+G+V+ +D+ + G+ +PFT Sbjct: 380 FVAMGAG---AYSVGMFHLFTHAFFKALLFLGAGSVIHAMHHEQDIRNMGGLKDRIPFTY 436 Query: 385 VLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLI---IVLLLLLLTLVLAGLVRMAA 441 + G LAL G P + S+ I A + L ++ ++ L R+ Sbjct: 437 GVMLIGTLALTGFPLTAGYFSKDAIIEAAFVSKNPLAFYGFLMTVVAALLTSFYSWRLVF 496 Query: 442 RVLMAKPPQAVN---RGDLGWLTTSPMVILLVMMLAMGTHIPQPVIR 485 + +P + + + T P+ +L LA G + Sbjct: 497 KTFHGEPHDRKHYEAAHESPLVMTIPLFVLAFGALAAGYPFKELFAG 543 >UniRef50_Q2S2L2 NADH dehydrogenase I, L subunit n=3 Tax=Rhodothermaceae RepID=Q2S2L2_SALRD Length = 665 Score = 365 bits (937), Expect = 3e-99, Method: Composition-based stats. Identities = 115/538 (21%), Positives = 214/538 (39%), Gaps = 64/538 (11%) Query: 20 LCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI-----------FAAGL 68 + K + V + + + + +L +++ T + Sbjct: 23 VAPLFLKHLRTRETLVGTVGTAVVAIPFVLTVYLFVTFGGDPIVADYFTWMAAGDLDLSF 82 Query: 69 WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLL 128 ID L L ++ +G + +YSIGYM + + ++ + +LF+F ML Sbjct: 83 AYRIDQLSLLMTGVVTGVGGVIHLYSIGYMHGDAGYW--------RFFAYLNLFIFAMLN 134 Query: 129 VVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVY 187 +V +NNL V++ E L S L+G + S+ AA K I+ VG L LV+ Sbjct: 135 LVLANNLPVLFLGWEGVGLCSYLLIGFWYTDLSNSAAANKAFIVNRVGDFAFLVAMFLVF 194 Query: 188 ANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHS 247 S+ +L + L + L +G K+ P+ WLPDA + Sbjct: 195 QQLGSLSF--------DVLLTEGPNLPEATLNWIVFLLFVGATGKSAQIPLFVWLPDAMA 246 Query: 248 EAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILV 306 P+PVSAL+ A ++ L +L R ++ G+ ++ I G + +AA + Sbjct: 247 -GPTPVSALIHAATMVTSGLYLLARLSALVL---GAPVVMMIIAIVGAATALMAATIAIA 302 Query: 307 QRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG 366 Q DIKR+LAYS+V +G + + G+G F ++ H++ H+ K LF GSG+V+ Sbjct: 303 QDDIKRVLAYSTVSQLGYMFMAAGVG---AFFVSIFHVITHAFFKACLFLGSGSVIHGME 359 Query: 367 T-----------------RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 +D+ + G+ + MP T + LA++G+P F S+ Sbjct: 360 EVEHGLEEQGRDTSDFDPQDMRTMGGVGEYMPATRTTYLLATLAISGIPLTAGFFSKDEI 419 Query: 410 ITAGLARNH------LLIIVLLLLLLTLVLAGLVRMAARVLMAKP----PQAVNRGDLGW 459 + + + + ++ ++ L ++R +P P ++ + Sbjct: 420 LFKAFEYGYDGSTYAMAVWIVGVVTAVLTAFYMMRSYMLTFEGEPRWPLPDQLSPHESPS 479 Query: 460 LTTSPMVILLVMMLAMG-THIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGT 516 T P+ L ++ L G +P + L + P ++ H +P Sbjct: 480 TMTGPLWTLGILSLVGGFIGLPAVIQGGDLNWIHHYLGAKYGGPVAEASVHGHVPLAL 537 >UniRef50_B4SLF9 NADH dehydrogenase (Quinone) n=20 Tax=cellular organisms RepID=B4SLF9_STRM5 Length = 943 Score = 364 bits (934), Expect = 7e-99, Method: Composition-based stats. Identities = 135/497 (27%), Positives = 223/497 (44%), Gaps = 31/497 (6%) Query: 36 TVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSI 95 L LG +L VV+T L +DGL +F ++ IG L +Y+ Sbjct: 40 GGLAILGWLTPSVLDGQVVRTMVPWLPQIGLDFTLRLDGLAWMFAGLVLGIGALVVLYAR 99 Query: 96 GYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGI 155 Y+ S +Y + LF+ ML +V S NL+++ E T++SS L+G Sbjct: 100 YYLS--------SQDNAHRFYTYLLLFMGAMLGMVVSGNLLLLMIFWEMTSISSFLLIGF 151 Query: 156 YGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLD 214 + R + E A ++I G L G +L+ S +A + Sbjct: 152 WSHRQDAREGARMALVITGGGGLALLGGVLLIGRIVGSFDLDVVLA-------AGEQIRA 204 Query: 215 PTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYY 273 L A +L G TK+ FP H WLP A + AP+PVSA L A ++ + +L R + Sbjct: 205 SALYPYALFLVLAGIFTKSAQFPFHFWLPHAMA-APTPVSAYLHSATMVKAGVFLLARLH 263 Query: 274 IIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGG 333 + GSD + G L++ + A+ + Q D+K LLAYS++ ++GL+ + G+ Sbjct: 264 PAL---AGSDLFFYTVSGIGALTLLIGAWNAIFQHDLKGLLAYSTISHLGLITLLFGLST 320 Query: 334 PLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALA 393 P+ + A + HILNH+ K LF +G + + GTRD+ + G+ ++MPFT+ L +LA Sbjct: 321 PMAVVAGVFHILNHATFKASLFMAAGIIDHETGTRDMRKLGGLRRLMPFTSALAIIASLA 380 Query: 394 LAGMPPFNIFLSEFMTITAGLARNH------LLIIVLLLLLLTLVLAGLVRMAARVLMAK 447 +AG+P N FLS+ M L + + LL +A +R Sbjct: 381 MAGIPLLNGFLSKEMLFAEALTAGGGPGAMRTAVSIAALLAGVFGVAYSLRFVHDTFFGP 440 Query: 448 PPQAVN--RGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQR 505 P ++ + P+ +L+V+ +A+G V +L A+ +L G Sbjct: 441 GPHDLDRVPHEPPRWMKVPVELLVVICVAVGIAPALTVAPVLHAAAASIL-GNAMPEYSL 499 Query: 506 STWHDF-LPSGTASVSE 521 + WH F LP +++ Sbjct: 500 AVWHGFNLPLAMSAIGV 516 >UniRef50_A9F578 NADH dehydrogenase I chain M n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F578_SORC5 Length = 754 Score = 363 bits (933), Expect = 8e-99, Method: Composition-based stats. Identities = 122/529 (23%), Positives = 218/529 (41%), Gaps = 53/529 (10%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQT-------- 56 + ++L PLL + F R R + ++ + + + L+LA W+ Sbjct: 193 HILSILTFLPLLGVVAVFLAHLLRYRDDRKLRLMTVVLMGVNLVLAAWLYAQFDRGFTRA 252 Query: 57 -AADAGEIFAAGLWLH---------IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGE 106 D + G+W+ +DG+ + + +I F+ + S Sbjct: 253 DGNDGYQFIEHGVWIRSLNVEYFVGVDGVSISMVLLTALISFVGALASYS---------- 302 Query: 107 LSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAW 166 L Y+ ++L + M V + +L + + E L FL+GI+G AA Sbjct: 303 -VHDQLKGYFAMYNLLVTGMFGVFIALDLFLFFVFWEVMLLPMYFLIGIWGGPRREYAAI 361 Query: 167 KYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAI----------FWSEVLKQSSLLDPT 216 K+ + G F L + Y NA A + + ++L Sbjct: 362 KFFLYTLAGSVFMLLAFIWFYLNAGHTYLVDGQATERIFSIPELSRVAWAAQGLTILGVA 421 Query: 217 LMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIII 276 + + +++L +GF K +FP H WLPDAH EAP+ +S +L+ VLL ++R + Sbjct: 422 AVKVVWIWLFVGFAIKIPMFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGILRINFTL 481 Query: 277 CQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLG 336 + + + +FG++++ AF + Q D+K+L+AYSSV +MG + LG P G Sbjct: 482 LPE-ATQWAAPAMAVFGVVNILYGAFCAMAQSDLKKLVAYSSVSHMGFTLLALGAMTPQG 540 Query: 337 IFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAG 396 I A L+ + NH L +LF G V + TRD++ G+ MP L G +A G Sbjct: 541 IQACLVQMFNHGLITGMLFTLVGVVYDRVHTRDIDRFGGLASEMPLYTALVGFAFMASLG 600 Query: 397 MPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK--------- 447 +P + F E MT R L +L + + L A + R+ + Sbjct: 601 LPGLSGFWGEAMTFIGAFPRYRAL-TILAAVGVILTAAYHLWALQRMFLGTFRASWRQSK 659 Query: 448 --PPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIV 494 P ++ + + L ++L +G P+P++ ++ + V Sbjct: 660 YLEPFGGKFPEISGRELASIAPLAALVLVLGFW-PRPLLSLIDRGALDV 707 >UniRef50_P56752 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=1715 Tax=cellular organisms RepID=NU5C_ARATH Length = 746 Score = 363 bits (933), Expect = 9e-99, Method: Composition-based stats. Identities = 110/465 (23%), Positives = 207/465 (44%), Gaps = 41/465 (8%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVV---------- 54 ++ + L P+L + + R T L +++++I ++++ Sbjct: 10 IIPFIPLPVPILLGVGLLLFPTATKNLRRMWTFLSIFLLSIVMIFSIYLSIQQIFLSCIH 69 Query: 55 --QTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 + F+ ID L + ++ +G L IYS YM H+ + Sbjct: 70 QNVWSWTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYL------- 122 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIII 171 ++ + F +ML +VTS+NLI ++ E + S L+G + R + A K + Sbjct: 123 -RFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVT 181 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 VG L G + +Y S Q IF + +L ++ ++ + L L +G Sbjct: 182 NRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLIL--NNRVNLLFLTLCAFLLFVGPIA 239 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ FP+H WLPDA E P+P+SAL+ A ++ + ++ R + I ++ Sbjct: 240 KSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGIFLVARLLPLF---IVIPSIMYIIS 295 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 + G+++V + A L Q+DIKR LAYS++ +G + + LG+G +AL H++ H+ + Sbjct: 296 LIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYS 352 Query: 351 KTLLFCGSGNVLLKY---------GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFN 401 K LLF GSG+++ ++++ ++ G+ K +P T F G L+L G+PP Sbjct: 353 KALLFLGSGSIIHSMEAIVGYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLA 412 Query: 402 IFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA 446 F S+ + L + + ++ L + R+ Sbjct: 413 CFWSKDEILNDSLLFS-PIFAIIACSTAGLTAFYMFRIYLLTFEG 456 >UniRef50_C5A2R1 Formate hydrogenlyase II subunit D (Mhy2D) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A2R1_THEGJ Length = 694 Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats. Identities = 142/533 (26%), Positives = 224/533 (42%), Gaps = 44/533 (8%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRT---VTVLHSLGITLLLILALWVVQTA 57 M +F L ++ L+ L RK ++ T L SL + + L Sbjct: 1 MKMKELFTLTVILYLISILAVLPLRKNYRASITVGHVFTGLASLSLLAFTVSVLPEALKG 60 Query: 58 ADAGEIFAAG---LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 + G + H+DGL + +LG +G T IYS YM G Sbjct: 61 KAIEFTYDLGVAKIPFHVDGLSLILCLVLGSLGLATSIYSPKYMEFYERFG-----RGWL 115 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICT 173 Y + F+ +M+L+VT++N + E T +S L+ +A WKY + Sbjct: 116 YVVLYSTFVLSMVLIVTTSNFLWFVFFWEVMTFTSYLLMVWENDEEYVRKAGWKYFVTMH 175 Query: 174 VGVAFGLF-GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTK 232 V L L+YA A S+ + + + ++ L+GFG+K Sbjct: 176 VASTLPLIVALALLYAKAGSIEGLNFDNLSKLHLGP-----------IYYLLFLVGFGSK 224 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 G+ P+H WLPDAH APS VSALLS ++ A+ LIR I ++ ++ I Sbjct: 225 AGVVPLHFWLPDAHPAAPSNVSALLSGAMIKVAVYGLIRTTCFILG--LNETFGYIVAIL 282 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAA------------ 340 G +++ V + L Q D KRLLAY SV MG + + +G G L Sbjct: 283 GTVTLTVGTLYALKQTDAKRLLAYHSVGQMGYIWLGVGAGIALMAKGGSYAAFGAIAMAA 342 Query: 341 -LLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPP 399 L H++NH++ K LLF +G+VL + TR+LNV+ G+ K+MP TA+ A+++AG PP Sbjct: 343 GLYHLVNHAIFKGLLFLSAGSVLYRTHTRELNVLGGLAKLMPLTALFTFIAAMSIAGEPP 402 Query: 400 FNIFLSEFMTITAGLARNHLLII---VLLLLLLTLVLAGLVRMAARVLMAKPPQ-AVNRG 455 FN F+S++M L++ V+ L + LA V+ P + N Sbjct: 403 FNGFMSKWMIYQGTFLSGDGLLVFCGVMALFISAATLASFVKFYTTAFGGVPTKVTENAE 462 Query: 456 DLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTW 508 ++ L + L G + +LA ++ W Sbjct: 463 EVPSSMLVGKGFLAALCLLFGLIPSSIIPLLLAP-GKVLTGTDLSGWISTKYW 514 >UniRef50_C6W0W0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W0W0_DYAFD Length = 658 Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats. Identities = 128/546 (23%), Positives = 220/546 (40%), Gaps = 63/546 (11%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA-- 65 LLL P LL + + L ++ L+ + + ++ Sbjct: 11 YLLLGLPFSCFLLLWLGGTSLNKYAGWIGALVTVAGLLISFTYIPNLGIPYSLLQVPLPW 70 Query: 66 -------AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 L L D L L L I+ + L +YS YM + + Y+ F Sbjct: 71 FAVGERYIDLSLRFDTLSTLMLVIVHFVALLVQLYSTAYMHAD--------RNVNRYFAF 122 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVA 177 LFLF+ML +V ++NL++M+ E LSS L+G + + + AA K ++ +G A Sbjct: 123 IQLFLFSMLGIVLASNLLMMYIFWELVGLSSYLLIGFWYTKKRPVWAAQKAFVLNRIGDA 182 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L G ++++ + + + + ++ + + L G K+ FP Sbjct: 183 AFLTGILMLFYYVGVTDLE--------VLALEIGTIPQGILTVIGICLFGGCVGKSAQFP 234 Query: 238 MHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 + WLPDA E P+PVSAL+ A ++ + +L R ++ ++L+ G ++ Sbjct: 235 LSGWLPDAM-EGPTPVSALIHAATMVAAGIFLLARISFLLTVD-----ARLVILVIGAIT 288 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + + A L DIK++LAYS++ +GL+ + +G G A+ H+ H+ K LF Sbjct: 289 MVIGAVKALNGWDIKKVLAYSTMSQLGLMVMAVGFGS---WQTAMFHLATHAFFKAGLFL 345 Query: 357 GSGNVLLKY-----GT--------RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 +G+V+ T +D+ + G+ K +P T + F A ALAG+P F+ F Sbjct: 346 SAGSVIHAVTPHEEHTGAEPQFDPQDMRTMGGLRKALPITFICFSICAAALAGLPFFSGF 405 Query: 404 LSEFMTITAG------LARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP--PQAVNRG 455 LS+ IT G L VL++L L + R + P AV+ Sbjct: 406 LSKDAIITEGFLWASEFGALGYLFPVLVVLSAGLTAFYMTRQVWLIFFGNERFPAAVHPH 465 Query: 456 DLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSG 515 + PM +L + + P A L + W F+ S Sbjct: 466 ESPVAMWLPMALLSALSV-FCWFSINPF-----NAEGWFLQWIGQEHGEHLIWVPFVASA 519 Query: 516 TASVSE 521 VS Sbjct: 520 FTFVSI 525 >UniRef50_B2ULN9 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2ULN9_AKKM8 Length = 610 Score = 362 bits (931), Expect = 1e-98, Method: Composition-based stats. Identities = 120/481 (24%), Positives = 216/481 (44%), Gaps = 31/481 (6%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL----WVVQTAADAGEI 63 LLL PL+ + + +R + L +L + L + +I Sbjct: 10 WLLLFLPLVVAAFDWFLLTKRPDVAALTSTFSCLATFVLSLGLLDRTGSDSFSWLPISDI 69 Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 + L +D L + ++ IG L ++S+GYM + A Y+ LF+ Sbjct: 70 SSVDLGFVLDPLSSRMMLVVTGIGLLVHVFSLGYMADDKAK--------TRYFACLSLFM 121 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFGLFG 182 F+M +V +NN+ + + E LSS L+G + R + AA K I VG L G Sbjct: 122 FSMTGIVLANNIAMTFIFWELVGLSSYLLIGHWYTRDTAANAAKKAFICNRVGDFGFLIG 181 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 + ++A ++ +++ + + L+ + + L G K+ FP+H WL Sbjct: 182 ILTLWALTNTLDFS---------LMEIPAGISENLLNITVLCLFCGAVGKSAQFPLHVWL 232 Query: 243 PDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 PDA E P+PVSAL+ A ++ + +++R I ++ G ++ +AA Sbjct: 233 PDAM-EGPTPVSALIHAATMVAAGVYMMVRVQYSIGIEAFPALACNVIAGIGAITAVIAA 291 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 F Q DIKR+LAYS++ +G + + LG+ L AA+ H+ H+ K LLF G+G + Sbjct: 292 FMATQQNDIKRVLAYSTLSQLGYMVMALGL---LAGEAAMFHLFTHAWFKALLFLGAGAI 348 Query: 362 LLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 + + +D+ + G++K M T++ F +AL +P + F S+ + A L +N + Sbjct: 349 IFACHHEQDIWKMGGIMKRMKLTSLTFIIATMALIAIPFTSGFFSKEAILEAALRKN-PV 407 Query: 421 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQA--VNRGDLGWLTTSPMVILLVMMLAMGTH 478 + + L ++R+ V K + ++G L P++IL V+ L G Sbjct: 408 FFWIGAGVALLTTFYMMRVIFVVFFGKSRSHSSEHASEVGGLMLVPLLILAVLALISGYG 467 Query: 479 I 479 Sbjct: 468 F 468 >UniRef50_A7HHY8 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Anaeromyxobacter RepID=A7HHY8_ANADF Length = 676 Score = 362 bits (931), Expect = 2e-98, Method: Composition-based stats. Identities = 116/495 (23%), Positives = 206/495 (41%), Gaps = 48/495 (9%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL--------------- 51 ++L PL +++ +R T+ L ++ L++ Sbjct: 15 LWAIILFPLAGAIVNGLVGRRIGKGNVTLVALGAMIGALIVSTVAFAWVVQGGVLHFRGE 74 Query: 52 -WVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPV 110 W+ D + + G L +D L G + ++ +G L IYS YM HE G Sbjct: 75 PWIRVAGPDGRALVSIGWGLFVDRLSGTMIMVVTGVGTLIHIYSASYMSHEDDAG----- 129 Query: 111 TLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYI 169 Y+ + +LF+ ML +V + L++ + E L S L+G + + A K Sbjct: 130 -YARYFTYLNLFVAAMLTLVLGDTLVLTFVGWEGVGLCSYLLIGFWYTDPAKAFAGRKAF 188 Query: 170 IICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDP-------TLMLLAF 222 + +G L G + + + AI + + + + A Sbjct: 189 VTNRIGDFGFLIGLFALLSIFGTASYGDLQAIARTIDPAATIQVGTFAGRTFQWAITFAL 248 Query: 223 VFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIG 281 + L +G K+ P++ WLPDA + P+PVSAL+ A ++ + ++ R + A Sbjct: 249 IGLFVGACGKSAQLPLYVWLPDAMA-GPTPVSALIHAATMVTAGVYLVARNAYLFSLAPA 307 Query: 282 SDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAAL 341 + I G L+ AA VQ DIK++LAYS+V +G + + +G+G +A + Sbjct: 308 ---AMATVTIVGALTALFAALIAFVQTDIKKVLAYSTVSQLGFMFIGVGVG---AWWAGV 361 Query: 342 LHILNHSLAKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 LH++ H+ K LF G+G+V+ G D+ + G+LK MP TA FG LA+ G P Sbjct: 362 LHLVTHAFFKACLFLGAGSVMHGMGDETDIRKMGGLLKKMPHTAATFGIATLAITGFVPL 421 Query: 401 NIFLSEFMTITAGLARNHL-------LIIVLLLLLLTLVLAGLVRMAARVLMAKPP--QA 451 + F S+ + L ++ + VL + + R+ + KP A Sbjct: 422 SGFWSKDAILGNALFSHNPAWHQVGQIAYVLGAVAALGTAFYMSRLFFLTFVGKPRTHAA 481 Query: 452 VNRGDLGWLTTSPMV 466 + + + T P+ Sbjct: 482 EHAHESSPVMTIPLW 496 >UniRef50_A1ZLY6 NAD(P)H-quinone oxidoreductase chain 5 (NAD(P)Hdehydrogenase I, chain 5) n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZLY6_9SPHI Length = 702 Score = 362 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 121/511 (23%), Positives = 222/511 (43%), Gaps = 61/511 (11%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA-- 60 + + L+LL P + L+ +K+ L T+L I+ W V Sbjct: 1 MTYLTLLILLLPFINFLVLLTGQKKIKRGGGHFATAVLLVTTVLAIVTAWQVLGGQPLYI 60 Query: 61 -GEIFAAG-----LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 F+ G + L+ID L L + ++ ++ L ++S+ YM+ + + Sbjct: 61 DIYWFSLGTRSFKVDLYIDNLSALMMIVVTLVSALVHMFSLEYMKTDKNYN--------R 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICT 173 Y+ + LF F+ML ++ +NL++++ E +SS L+G + ++ S A+ K ++ Sbjct: 113 YFAYLGLFTFSMLGIIIFHNLLIIYIFWELVGVSSYLLIGFWYEKKSATRASQKAFLVNR 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 +G L G +LV+ + Q + L ++L+ + L G K+ Sbjct: 173 IGDVGFLAGILLVFNYFGDFNLLSIAQS------PQFASLSVGVLLIIGLCLFCGAVGKS 226 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 FP+ WLPDA E P+PVSAL+ A ++ + +L R + ++ S ++ Sbjct: 227 AQFPLQVWLPDAM-EGPTPVSALIHAATMVAAGVYLLARIFFLLNLEALS-----VIATI 280 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G ++ + AF L Q DIK++LAYS++ +G + + +G+G A+LLH+L H+ K Sbjct: 281 GCITAFIGAFSALAQSDIKKVLAYSTISQLGYMVMGMGVG---AYEASLLHLLTHAFFKA 337 Query: 353 LLFCGSGNVLLKYG-----------TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFN 401 LF +G V+ +++ ++ G+ K MPFT + + A ALAG+P F+ Sbjct: 338 CLFLCAGAVIHSMHQLEHKLNIHFDAQNMYLMGGLRKAMPFTFMCYVLSAAALAGLPFFS 397 Query: 402 IFLSEFMTITAGLARNH-------LLIIVLLLLLLTLVLAGLVRMAARVLMA-------- 446 FLS+ ++ LA L+ + L L + R V Sbjct: 398 GFLSKDAILSGSLAWASFKGGGVWYLLPLFGFLSAFLTAFYMGRQLFLVFFGHLELEKVF 457 Query: 447 --KPPQAVNRGDLGWLTTSPMVILLVMMLAM 475 D+ P+ +L + L + Sbjct: 458 EEAKGALAKVKDVPLQMKIPLGVLALGALWL 488 >UniRef50_C5VLQ3 NADH dehydrogenase subunit 5 n=10 Tax=Bacteroidales RepID=C5VLQ3_9BACT Length = 684 Score = 360 bits (926), Expect = 6e-98, Method: Composition-based stats. Identities = 120/578 (20%), Positives = 216/578 (37%), Gaps = 68/578 (11%) Query: 9 LLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA-------- 60 L+LL P L +++ + + LG +L L Sbjct: 7 LILLLPFLSAVVLGLFGMKMPRKVAGIIGTCMLGTLFVLSLYTAYHYFFYTGEYTAMGET 66 Query: 61 --------------------------GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYS 94 E+ + + + + L ++ + + IYS Sbjct: 67 FNVTDGRLANGTYPTVTVFNITWLKFTELLTFNIGFRLSPISVMMLIVITTVSLMVHIYS 126 Query: 95 IGYM--RHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFL 152 GYM R E E +Y + LF +ML +V + N+ M+ E + S L Sbjct: 127 FGYMAERDENYKFEEYEHGFQRFYAYLSLFTMSMLGLVVATNIFQMYLFWELVGVCSYLL 186 Query: 153 VGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSS 211 +G Y + +++ A+ K I+ F L G + + + E L + Sbjct: 187 IGFYYPKHTAVHASKKAFIVTRFADLFFLIGILFFSFYVGTFNYDLNVNPGLVETLNGLA 246 Query: 212 LLDP--TLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLV 268 ++ A + IG K+ +FP+H WLPDA E P+PVSAL+ A ++ + Sbjct: 247 KNPHLTWVLPTALFLMFIGGAGKSAMFPLHIWLPDAM-EGPTPVSALIHAATMVVAGVFQ 305 Query: 269 LIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVE 328 + I Q G+ + + AA QRDIKR LA+S++ + + V Sbjct: 306 VASLLPIYVQ-FGAQEQLHWIAWIAAFTAFYAAAVACAQRDIKRGLAFSTISQIAYMLVA 364 Query: 329 LGI-----------------GGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLN 371 LG+ G LG AA+ H+ H++ K LLF SG +++ G+ Sbjct: 365 LGVCFYEKEHGSFYSAEYLHHGGLGYMAAMFHLFTHAMFKALLFLCSGAIIVIIGSNFKE 424 Query: 372 VVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL---LIIVLLLLL 428 + G+ K MP T + F G LA+AG+PPF F S+ I+A A + + ++ L+ Sbjct: 425 YMGGLHKYMPITNICFLIGCLAIAGIPPFAGFFSKDEIISACNALPGVEGQALKWIMTLV 484 Query: 429 LTLVLAGLVRMAARVLMAK------PPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQP 482 + + R+ + + P ++ ++ P+V L ++ + G Sbjct: 485 AGMTAFYMFRLYYVIFWGESYYEQDPENRRRPQEVPFVMWGPLVFLAIISITAGWIPFGH 544 Query: 483 VIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVS 520 + + I + + + + F + Sbjct: 545 FVSANGLSYDIHIDRSIATTSIIAALIGFALATWMYAG 582 >UniRef50_B1NWJ6 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=3586 Tax=root RepID=NU5C_MANES Length = 752 Score = 360 bits (925), Expect = 8e-98, Method: Composition-based stats. Identities = 108/465 (23%), Positives = 202/465 (43%), Gaps = 41/465 (8%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL------------W 52 ++ + L P+L R +++++I ++ + Sbjct: 10 IIPFVTLPVPMLIGAGLLLFPAATKKLRRMWAFPSVFLLSIVMIFSIDLSIQQINSSFIY 69 Query: 53 VVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 + F+ ID L + ++ +G L YS YM H+ + Sbjct: 70 QYIWSWTINNDFSLEFGHLIDPLTSILSVLITTVGILVLFYSDNYMSHDQGYL------- 122 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIII 171 ++ + F +ML +VTS+NLI ++ E + S L+G + R + A K + Sbjct: 123 -RFFAYMSFFTTSMLGLVTSSNLIQIYIFWELVGVCSYLLIGFWFTRPIASNACQKAFVT 181 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 VG L G + +Y S + IF + + ++ ++ + L V L G Sbjct: 182 NRVGDFGLLLGILGLYWITGSFEFRDLFKIFNNLIY--NNQVNFLFVTLCAVLLFSGAIA 239 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ FP+H WLPDA E P+P+SAL+ A ++ + ++ R + + + F L+ Sbjct: 240 KSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGIFLVARLFPLF---VIIPFIMNLIA 295 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 + G+++V + A L Q+DIKR LAYS++ +G + + LG+G AAL H++ H+ + Sbjct: 296 LIGIITVFLGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYS 352 Query: 351 KTLLFCGSGNVLLKY---------GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFN 401 K LLF GSG+++ ++++ ++ G+ K +P T F G L+L G+PPF Sbjct: 353 KALLFLGSGSIIHSMEAILGYSPDKSQNMVLMGGLTKHIPITKTAFLLGTLSLCGIPPFA 412 Query: 402 IFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA 446 F S+ + + + ++ L + R+ Sbjct: 413 CFWSKDEILNDSWLYS-PIFAIIACFTAGLTAFYMFRVYLLTFDG 456 >UniRef50_A5CFN9 NADH dehydrogenase I chain L n=2 Tax=Orientia tsutsugamushi RepID=A5CFN9_ORITB Length = 635 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 112/524 (21%), Positives = 218/524 (41%), Gaps = 33/524 (6%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 S + LL PL+ ++ +TV+ + IL W + Sbjct: 1 MSFLITLLPCLPLISGVISRLNNSFATKIISYITVMLIASTSFAAILVFWNISKHNSVEH 60 Query: 63 I----------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 I F + ++ID L L L I+ +I + IYSIGY+ + L Sbjct: 61 IILFEWLELLNFKSHWAIYIDKLTALMLVIVSLISTIVHIYSIGYLHDDKE--------L 112 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKY-III 171 + + F F ML++V+S+N + ++ E +SS L+G + ++ + A I+ Sbjct: 113 PKFMSYLSFFTFFMLMLVSSDNFLQLFFGWEGVGVSSYLLIGFWHKKYAAIIAAYKAFIV 172 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDP--TLMLLAFVFLLIGF 229 L + + N SV + + S++D +++ L L IG Sbjct: 173 NRFADCAFLLAIIAIIYNCNSVEFKTVFSHAEQLSKTIVSIVDIKISVLDLICCLLFIGC 232 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRL 288 K+ +H WLPDA E P+P SAL+ A ++ + +L R + + L Sbjct: 233 MGKSAQIGLHIWLPDAM-EGPTPASALIHAATMVTAGIFLLARCSFMFEYSTA---ILNL 288 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 + I G + + + + Q DIK+++AYS+ +G + + G A+ H+L H+ Sbjct: 289 IAITGGFTCILTSIIAVCQNDIKKIIAYSTCSQLGYMVMACGSSS---YNGAMFHLLTHA 345 Query: 349 LAKTLLFCGSGNVLLKYGTRDLNVV-CGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 K +LF +GNV+ +DLN + + ++MP+T LF G LA+ G+ PF+ F S+ Sbjct: 346 FFKAMLFLAAGNVIHMTHQQDLNKMPQQLWRVMPYTYGLFWLGTLAIVGIFPFSGFYSKD 405 Query: 408 MTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK--PPQAVNRGDLGWLTTSPM 465 M + + ++ + L ++ + +++ + + ++ + P+ Sbjct: 406 MILESVYLTDNKFVYYLGIIAVFFTAMYSIKLIIGIFHQPSFSSTKHSIKEVSIIMNLPL 465 Query: 466 VILLVMMLAMGTHIPQPV-IRILAGASTIVLSGTHDLPAQRSTW 508 +IL + G + + I + + + + + + W Sbjct: 466 LILAIGSAISGWYCYNILTIGKVEYFANSLFNNGNLENLHINCW 509 >UniRef50_A9B485 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=Chloroflexi (class) RepID=A9B485_HERA2 Length = 736 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 123/574 (21%), Positives = 210/574 (36%), Gaps = 101/574 (17%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M + + L+ L PL +L S + T L +I + Q+ ++ Sbjct: 1 MPFFDLAWLIPLLPLAAFVLITLVPPIGRSRKASYTTALVLLGLATVIAWGVLAQSISEG 60 Query: 61 GEIFA--------------------------------------------AGLWLHIDGLG 76 +DG Sbjct: 61 FPNAPLVAAASQESASEATAEGGHAETAIPTFGNFYAKSFAWAPDGSGFFKFGYRLDGAT 120 Query: 77 GLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLI 136 L LA++ + + ++S+GYM H+ ++ + LF +ML + ++NL+ Sbjct: 121 VLMLAMVTLAAWCIHLFSVGYMAHDE--FPTGHQRQSRFFSYIALFTASMLGMTLADNLL 178 Query: 137 VMWAAIEATTLSSAFLVGIYG-QRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMP 195 + + E L S L+G + + S+ EAA K I +G + G + +Y A S+ Sbjct: 179 LFFICWELMGLCSFLLIGFWFFKPSAREAAKKAFITTRIGDVGMMLGMMYIYNKAGSLTF 238 Query: 196 QAEMAIFWSEVL------KQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 E ++ S + + L + +G K+ FP+H WLPDA E Sbjct: 239 GHEPGQIYNGEFLESIKTATSLIPGISAASLMAGLVFLGTVGKSAQFPLHVWLPDAM-EG 297 Query: 250 PSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQR 308 P+PVSAL+ A ++ + ++IR + I ++ G + AA + Q Sbjct: 298 PTPVSALIHAATMVAAGVFLVIRTFPIF----AVSEVLPVVAFIGAFTALFAALIAVAQY 353 Query: 309 DIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY--- 365 DIKR+LA+S++ +G + LGIG AAL H+L H+ K LLF GSG+V+ Sbjct: 354 DIKRILAFSTLSQLGFMVAALGIG---AWVAALFHLLTHAFFKALLFLGSGSVIHGMEAT 410 Query: 366 ------GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 +D+ + + K MP T + + G AL G+PPF F S+ I +H Sbjct: 411 VGHDPDKAQDIRNMGTLRKFMPITFLTYMAGFFALIGIPPFAGFWSKDEIILDAFLHHHY 470 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVN-------------------------- 453 ++ +L L + R V K Sbjct: 471 VVYGVLTAAAFLTAFYMTRQIVVVFFGKFRGYEPRKLAHAAAHGHDDHGHGDHDDHHHHH 530 Query: 454 ----RGDLGWLTTSPMVILLVMMLAMGTHIPQPV 483 + T P++IL + + G + Sbjct: 531 EAHDPHESPRSMTIPLIILSLFAVFAGFVNAGFL 564 >UniRef50_Q34313 NADH-ubiquinone oxidoreductase chain 5 n=6 Tax=Eukaryota RepID=NU5M_DICDI Length = 670 Score = 359 bits (923), Expect = 1e-97, Method: Composition-based stats. Identities = 109/508 (21%), Positives = 210/508 (41%), Gaps = 38/508 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 M+ + L+ PL+ S++ + + + + +T + L + ++ F Sbjct: 1 MYIVNLILPLIGSIITGIFGHKLGNRISIKIAVGCMMLTAISSLYIGYEILLCNSVVHFK 60 Query: 66 AGLWLHI-----------DGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 G W+ + D L + + ++ I + +YS+ YM+ + Sbjct: 61 LGTWMQVGSLNVEYGLLYDSLTSIMIIVITCISSMVHLYSMDYMKEDPHK--------TR 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICT 173 ++ + LF F M+L+VT++N + ++ E + S L+ + R + ++A K +I+ Sbjct: 113 FFSYLSLFTFFMMLLVTADNFVQLFFGWEGVGIMSYLLINFWYTRLQANKSALKAVILNR 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEM--AIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 G FG +LV+ SV A F +E + + L F++IG Sbjct: 173 FGDFGLFFGILLVFLVFKSVDFSVIFTIAPFITEYTINLLGYEVNAITLIGSFIVIGVVG 232 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ +H WLPDA E P+PVSALL A ++ + +++R ++ +I Sbjct: 233 KSAQLGLHMWLPDAM-EGPTPVSALLHAATMVTAGVFLVLRTSPLLSYSITILNILT--- 288 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 I G L+ A +VQ DIKR++AYS+ +G + G+ A++ H+ H+ Sbjct: 289 IIGALTTLFATTIGIVQNDIKRVIAYSTCSQLGYMIFACGLLN---YNASIYHLTTHAFF 345 Query: 351 KTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 K LLF +G+V+ +D+ + G++ +MP T G LAL G P + + S+ + Sbjct: 346 KALLFLSAGSVIHGLNDEQDMRKMGGLVNLMPLTYQCMLIGTLALTGFPFLSGYYSKDII 405 Query: 410 ITAGLARNHL---LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVN----RGDLGWLTT 462 + A + ++ + R+ KP + Sbjct: 406 LETSYATYYWEGTFAAIIGYVAAFGTTFYSFRLLILTFFNKPRMQYKTIAGVHEASTNMV 465 Query: 463 SPMVILLVMMLAMGTHIPQPVIRILAGA 490 P+VIL + + +G + + Sbjct: 466 IPLVILALCSIFIGYVTKDFFVGLGTPV 493 >UniRef50_A1SE38 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Actinomycetales RepID=A1SE38_NOCSJ Length = 643 Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats. Identities = 119/520 (22%), Positives = 217/520 (41%), Gaps = 42/520 (8%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 + L++ PL + + + + L + +L ++ + + + F Sbjct: 23 LLWLVVALPLAGAAILLVGGRYTDKWGHLLGTLLPVVSFILSLVLFFDLLGRDEGDRQFN 82 Query: 66 -------------AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 G+ L D L LFL ++ +G L +YSIGYM H+ Sbjct: 83 QHVFTWFQTGHLDVGMDLLYDPLSALFLLLITGVGSLIHVYSIGYMAHDP--------RR 134 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAA-WKYIII 171 ++G+ +LF+ MLL+V S N + ++ E L+S L+G + R S AA K +I Sbjct: 135 RRFFGYLNLFVAAMLLLVLSENYLGLFLGWEGVGLASYLLIGFWQHRPSAAAAGKKAFVI 194 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 VG ++ Y S A + T + + + LL+G Sbjct: 195 NRVGDMGMSTAIMMFYVTFGSTSFTVISA--------NAPGASDTQLTILGLLLLLGACA 246 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ FP+ AWL DA E P+PVSAL+ A ++ + +++R I + ++ Sbjct: 247 KSAQFPLQAWLLDAM-EGPTPVSALIHAATMVTAGVYLIVRSNFIFE---AAPHAQTAVV 302 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 + ++S+ A + DIK+ LA S++ +G + + G+G F A+ H+L H Sbjct: 303 VVALISILWGAAIGCAKDDIKKGLAGSTMSQIGYMMLGAGLGAAGYAF-AIFHLLTHGFF 361 Query: 351 KTLLFCGSGNVLLKYGTR-DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 K +F G+G+V+ D+ + K+MP T + F G LA+ G P F+ F S+ Sbjct: 362 KANMFLGAGSVMHGMNDDVDMRHYGALRKMMPVTFLTFAMGYLAIIGFPGFSGFWSKDKI 421 Query: 410 ITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP---QAVNRGDLGWLTTSPMV 466 I L ++ L+ + ++ + + RM + V+ + + T P+V Sbjct: 422 IETAL-ADNWLVGLCAIIGAGVTGFYMTRMMLMTFFGDDRRWEKDVHPHESPSVMTVPLV 480 Query: 467 ILLVMMLAMGTHIPQ-PVIRILAGASTIVLSGTHDLPAQR 505 +L + + G + + LA + +PA Sbjct: 481 VLAALSVLGGLMLAGDWIQDFLAPVVGVGAHDDPPVPALL 520 >UniRef50_D0XMF8 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteobacteria RepID=D0XMF8_9CAUL Length = 992 Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats. Identities = 130/519 (25%), Positives = 226/519 (43%), Gaps = 34/519 (6%) Query: 16 LFSLLCFACRKRRLSATRTVTVLHSLGITLLL------ILALWVVQTAADAGEIFAAGLW 69 + +L +R +A+ +L ++L +LA VVQ D + L Sbjct: 48 IGALAPALAIRRGRNASALAAGAVTLAALVILGSFAPAVLAGEVVQARIDWIPLLGLNLN 107 Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L +D LG +F ++ IG L +Y+ Y+ + ++ + LF M + Sbjct: 108 LFLDALGLMFAGMILGIGLLVIVYARFYLAK--------ADPMGRFFVYLLLFQGAMTGI 159 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 V S+N++++ E T+LSS L+G + + A + + G + G +++ Sbjct: 160 VLSDNVLLLLIFWELTSLSSFLLIGFWRHLPEGRQGARMALAVTGAGGLSLIGGLLILGN 219 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 A S + + ++ L L A + +L G TK+ FP H WLP A + Sbjct: 220 IAGSYDLTVILQ-------NREAIQASPLYLPALLLILGGCFTKSAQFPFHFWLPHAMA- 271 Query: 249 APSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQ 307 AP+PVSA L A ++ + +L R + ++ G+ L+ G++++ AA L + Sbjct: 272 APTPVSAYLHSATMVKAGIFMLARLWPVL---SGTGEWFYLVATTGLVTMVFAAVVALFK 328 Query: 308 RDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGT 367 D+K LLAYS++ ++G + + G G P+ + HILNH+ K LF +G V + GT Sbjct: 329 DDLKGLLAYSTISHLGFLTMLFGFGTPMAAVVGVFHILNHATFKAALFMNAGIVDHEAGT 388 Query: 368 RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG----LARNHLLIIV 423 RD+ + G+ +MP A L L++AG+PP N F+S+ M + L+ Sbjct: 389 RDIKRLGGLATLMPIAATLAVVAGLSMAGIPPLNGFISKEMMLEEASHTVWWSQPWLVPA 448 Query: 424 LLLLLLTLVLAGLVRMAARVLMAKPPQAVN--RGDLGWLTTSPMVILLVMMLAMGTHIPQ 481 L L T +A R V D G P +L+ +++A+G Sbjct: 449 LATLGATFSVAYSFRYIVHVYFGTTRTDYPKTPHDPGIGLWGPPAVLVGLVVAIGLFPAV 508 Query: 482 PVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVS 520 ++ S V+ G S WH P+ S++ Sbjct: 509 VAGPLVEAVSRAVIGGETPY-YSLSLWHGVTPALFMSLA 546 >UniRef50_Q85FH9 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=8 Tax=Euphyllophyta RepID=NU5C_ADICA Length = 729 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 118/466 (25%), Positives = 197/466 (42%), Gaps = 45/466 (9%) Query: 8 ALLLLTPLLFSL----LCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI 63 ++ L PL+ S L F + R +L+ + + + ++L + Q I Sbjct: 9 WIIPLCPLIASCCTGSLSFFFPRVARGFHRLCALLNVFSLAISMFVSLAIFQEQFVKNPI 68 Query: 64 ------------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 F + +D L + ++ +G L IYS YM ++ + Sbjct: 69 QQYLWIWIPRSTFCVEIGFLVDSLTLVMSLLVTTVGVLVMIYSDSYMCYDRGY------- 121 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYII 170 +Y + LF +ML +V S NLI ++ E + S LVG + R S+ A K + Sbjct: 122 -TRFYAYLSLFTASMLGLVLSPNLIQLYVFWELVGMCSYLLVGFWFARSSAANACQKAFV 180 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 +G L G + +Y S F LK+ +P L + LL G Sbjct: 181 TNRIGDFGLLLGILGIYWTTGSFEISELCDRFAK--LKEIGFSNPILTNIIAFLLLAGPV 238 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ FP+H WLPDA E P+P+SAL+ A ++ + + R Y +I + Sbjct: 239 AKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGIFFIARIYGLI---STLPLVMQAS 294 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 G + + A L QRD+K+ LAYS++ +G + + LGIG +AL H++ H+ Sbjct: 295 SWLGGATALLGATLALAQRDLKKGLAYSTMSQLGYMVLALGIG---AYQSALFHLVTHAY 351 Query: 350 AKTLLFCGSGNVLLKY---------GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 +K LLF G+G+V+ ++++ + G+ K MP T F G L+L+G+PP Sbjct: 352 SKALLFLGAGSVIHSIEKVVGYSPNRSQNMFFMGGLRKYMPITGTTFLLGTLSLSGIPPL 411 Query: 401 NIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA 446 F S+ I + L +L L + R+ Sbjct: 412 ACFWSKDEIIHESWLSSLPL-GILASGTAGLTAFYMFRIYLLTFEG 456 >UniRef50_Q1IS53 Proton-translocating NADH-quinone oxidoreductase, chain M n=16 Tax=Bacteria RepID=Q1IS53_ACIBL Length = 559 Score = 358 bits (920), Expect = 3e-97, Method: Composition-based stats. Identities = 122/525 (23%), Positives = 222/525 (42%), Gaps = 31/525 (5%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAAD- 59 M S + +++L TPL ++L K +A R + L +L L+ + + Sbjct: 1 MFRSHILSIVLFTPLAGAILLLMVPKENKNAIRWIANLAALAGFLVSLPLIPWFWAVKSE 60 Query: 60 --------------AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHG 105 AG L IDG+ L + + ++G ++ + S Sbjct: 61 VTPYFKFAEGSTNNWIPSIGAGYQLGIDGISFLLIILTTLLGSISILSSW---------- 110 Query: 106 ELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAA 165 + +YY +F L ML V +N+ + + EA + L+GI+G L AA Sbjct: 111 TAIENRVKEYYAWFLLLQTGMLGVFMANDFFLFFVFWEAMLVPMYLLIGIWGGPRKLYAA 170 Query: 166 WKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFL 225 K+ + G L G + +Y + +V + + L+ + F Sbjct: 171 IKFFLYTLAGSVLMLLGILFLYFHHHTV--TGVYTFSLEALYATAPLITGKAAIFLFFAF 228 Query: 226 LIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGS-DF 284 +GF K +FP H WLPDAH EAP+ S +L+ VLL LIR+ + A+ + + Sbjct: 229 FVGFAIKVPMFPFHTWLPDAHVEAPTAGSVILAGVLLKMGTYGLIRFSLPFFPAVATIKW 288 Query: 285 PNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHI 344 LL+ ++ + A LVQ+D+K+L+AYSSV ++G + + + +GI +++ Sbjct: 289 VQALLITLSLIGILYGALVSLVQKDMKKLVAYSSVSHLGFCTLGIFVFTQMGIAGSVIQQ 348 Query: 345 LNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 +NH ++ LF G + + TR+++ G+ +MP A + ++ G+P N F+ Sbjct: 349 INHGISTGALFLIVGILYERRHTREISEYGGISTVMPVYATIALIMFMSSMGLPLLNGFV 408 Query: 405 SEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA--KPPQAVNRGDLGWLTT 462 E + A N I + + L A L+ + RV P+ DL Sbjct: 409 GEMPIMMATFMVNKTWAIW-AIPGVVLAAAYLLWLYQRVFFGTVTNPKNEKLADLTPREL 467 Query: 463 SPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRST 507 + V L+++ LA+G + + A+ + + + P + Sbjct: 468 ATFVPLVILALAIGLYPQPLFKILDQPAAKLEATINANRPGHVAP 512 >UniRef50_Q2YA95 Proton-translocating NADH-quinone oxidoreductase, chain L n=64 Tax=Bacteria RepID=Q2YA95_NITMU Length = 662 Score = 357 bits (918), Expect = 5e-97, Method: Composition-based stats. Identities = 111/514 (21%), Positives = 209/514 (40%), Gaps = 42/514 (8%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 + L+ PL LL + + S+ ++ L+ + + + A Sbjct: 1 MLSLLWLIPTLPLAGFLLLVLGGNHLGHRSIAMIGTGSVALSALVAILIGIDFITAPPPG 60 Query: 63 I--------------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 F+ G+ ++D L + + ++ VI FL +YS +M + + Sbjct: 61 FVFRQEAWTWIAVAGFSPGIVFYLDALSLVMVVVVTVISFLIHLYSTEFMSGDEGY---- 116 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWK 167 ++ + +LF+ +M ++V ++NL+ ++ E L S L+G + + + AA K Sbjct: 117 ----ARFFAYMNLFVGSMCILVLADNLLFLYLGWEGVGLCSYLLIGFWYRDPANGRAARK 172 Query: 168 YIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLI 227 I+ VG G L++ + ++ Q M E S L LL Sbjct: 173 AFIVTRVGDTAMAIGFFLLFTHLGTLDIQPLMQRATQEWPVGSELAILAAALLLGGA--- 229 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPN 286 K+ P+ WLPDA + P+PVSAL+ A ++ + ++ R + + A F Sbjct: 230 --AGKSAQLPLQTWLPDAMA-GPTPVSALMHAATMVTAGVYLIARTHALFVLAPAVQFA- 285 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 + G L++ +A F L Q DIKR+LAYS++ +G + + LG+G AA+ H++ Sbjct: 286 --VAAVGALTLLLAGFSALAQNDIKRVLAYSTISQLGYMFLALGVG---AWSAAIFHLVT 340 Query: 347 HSLAKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPP-FNIFL 404 H+ K LLF +G V++ D+ + + K +P T F G+ +LA +P F Sbjct: 341 HAFFKALLFLSAGVVIMSLHEEHDIFRMGALRKKLPVTFWTFLIGSASLAALPLVTAGFY 400 Query: 405 SEFMTITAGLAR--NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR--GDLGWL 460 S+ + + + + + L + R+ V + G Sbjct: 401 SKDLILWQAWSSRGGNPWLWAAGWGGAILTGLYIFRVVFLVFFGEARTVAPPEIRRPGRR 460 Query: 461 TTSPMVILLVMMLAMGTHIPQPVIRILAGASTIV 494 T P+++L + G + L S + Sbjct: 461 ITVPLIVLAAFSVVGGWIETPSFLGNLTLFSDFI 494 >UniRef50_Q1IZW2 NADH-quinone oxidoreductase, L subunit n=3 Tax=Deinococcus RepID=Q1IZW2_DEIGD Length = 639 Score = 357 bits (916), Expect = 7e-97, Method: Composition-based stats. Identities = 119/535 (22%), Positives = 213/535 (39%), Gaps = 51/535 (9%) Query: 15 LLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA-------AG 67 L L R ++TVL S + +L L Sbjct: 15 ALLILFPRLFPGRSAGWLGSLTVLASFVVAVLRYLGQTETPAHEVLWTWLPNMALNANLA 74 Query: 68 LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 + ++D L L I+ +GFL +YSI YM H+ ++ F + F+ ML Sbjct: 75 VGFYLDQLSALMALIITGVGFLIHVYSISYMGHDP--------KFVRFFAFMNFFVGMML 126 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEA-------------------AWKY 168 ++V +++ +M+ E +S L+G + + EA A K Sbjct: 127 ILVLADSYPLMFVGWEGVGTASYLLIGFWFSGRNSEAPDRKLREASDREGVANSNAARKA 186 Query: 169 IIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIG 228 I+ +G + G L+Y +++ + Q+ + LA +FLL+G Sbjct: 187 FIMNRIGDLGFMLGMFLLYKLYGTLVIPELAGRVAGAQVAQAG------IELACLFLLVG 240 Query: 229 FGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNR 287 K+G P+ WLPDA + P+PVSAL+ A ++ + ++ R + + A + Sbjct: 241 AVGKSGQLPLTTWLPDAMA-GPTPVSALIHAATMVTAGVYLIARSHFLYDLAPTASTW-- 297 Query: 288 LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNH 347 + G L+ A L Q DIK++LAYS+V +G + + +G+ A + H+L H Sbjct: 298 -VAWVGALTALYGALSALNQHDIKKILAYSTVSQLGYMFLAVGLH---AYSAGVFHLLTH 353 Query: 348 SLAKTLLFCGSGNVLLKYGT-RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 + K LLF +G V+ +D+ + G+ MPFT + G LA+AG+P ++ F S+ Sbjct: 354 AFFKALLFLSAGAVIHALHEEQDVRAMGGLRTFMPFTHLAALMGVLAIAGIPIWSGFFSK 413 Query: 407 FMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA-VNRGDLGWLTTSPM 465 + + ++ V+ L + L + R V + + L P+ Sbjct: 414 DAILATAFTAD-PILYVVGLGVALLTAFYMGRWYFLVWQGDYRGHVAHPHEADGLMQVPL 472 Query: 466 VILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVS 520 IL + G + T + P + ++L + A V+ Sbjct: 473 GILAALATFGGFLNIPSFLGGNHAFDTSLARALPLHPHELPVSTEWLLTLLAVVA 527 >UniRef50_Q39QB8 NADH-plastoquinone oxidoreductase, chain 5 n=8 Tax=Deltaproteobacteria RepID=Q39QB8_GEOMG Length = 669 Score = 357 bits (916), Expect = 7e-97, Method: Composition-based stats. Identities = 127/560 (22%), Positives = 228/560 (40%), Gaps = 57/560 (10%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 L+ L PL+ ++ K+ + T + + L+ +++ + + E Sbjct: 1 MFEYVWLIPLFPLIGVVINGLLGKKIKNETVIGGIGSLMVFGSFLVSFGILIELLSRSAE 60 Query: 63 I---------------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGEL 107 F A + ID L L + ++ +GFL +YSIGYM E Sbjct: 61 ERVFEKVLFTWIKSGNFNAEIGFLIDPLSALMIMVVTGVGFLIHVYSIGYMHGEEG---- 116 Query: 108 SPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAW 166 Y+ + +LF F+MLL+V NNL++M+ E L S L+G Y + S +A Sbjct: 117 ----FYRYFTYLNLFTFSMLLLVLGNNLLLMFVGWEGVGLCSYLLIGYYFHKKSAGDAGK 172 Query: 167 KYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLL 226 K ++ VG L G +Y F L ++ + + Sbjct: 173 KAFVMNRVGDFGFLLGVFTLYWYLGQ-NHNVWTINFRQLAANAHLLPVGGVVTVIALCFF 231 Query: 227 IGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFP 285 +G K+ P++ WLPDA E P+PVSAL+ A ++ + ++ R + I S Sbjct: 232 LGATGKSAQLPLYTWLPDAM-EGPTPVSALIHAATMVTAGVYMIGRLNFVY---IRSHET 287 Query: 286 NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 ++ I G + AA Q DIKR+LAYS+V +G + + +G+G A + H++ Sbjct: 288 MMIVAIVGAATAIFAATIGTAQNDIKRVLAYSTVSQLGFMFLAMGVG---AFTAGIFHLM 344 Query: 346 NHSLAKTLLFCGSGNVLLKY-----------GTRDLNVVCGMLKIMPFTAVLFGGGALAL 394 H+ K LF GSG+V+ +D+ + G+ K MP T + F +A+ Sbjct: 345 THAFFKACLFLGSGSVIHSMHHALHHAHSHDDPQDMRNMGGLKKQMPITFLTFLVSTIAI 404 Query: 395 AGMPPFNIFLSEFMTITAGLARN-----HLLIIVLLLLLLTLVLAGLVRMAARVLMAK-- 447 AG+P F+ F S+ + A ++++ + + R+ + Sbjct: 405 AGIPGFSGFFSKDEILWQAFANPLHGDLNIILWATGAIAAGFTAFYMFRLVFMTFFGECR 464 Query: 448 --PPQAVNRGDLGWLTTSPMVILLVMMLAMG-THIPQPVIRILAGASTIVLSGTHDLPAQ 504 + + + T P+++L ++ + G IP+ + + G + H L Sbjct: 465 IVEKAKSHLHESPLVITFPLMVLGLLAVVGGYVGIPKLIGELFGGIPNYL---EHYLEPV 521 Query: 505 RSTWHDFLPSGTASVSEKHS 524 +F+ A + HS Sbjct: 522 FKGSEEFMAQQLAHGAAHHS 541 >UniRef50_UPI0001C3127D proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3127D Length = 671 Score = 357 bits (916), Expect = 8e-97, Method: Composition-based stats. Identities = 109/559 (19%), Positives = 214/559 (38%), Gaps = 72/559 (12%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAAD- 59 MS + L+L PL +++ KR ++ + + + + D Sbjct: 1 MSTTTWGWLVLAFPLAGTIIIGLGHKRLARGPAGAIGTLAILLAFVSAVGALLSLQDRDE 60 Query: 60 -------AGEIFAAG------LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGE 106 + +A L + +D L + ++ + L +YS+ YM+ + + Sbjct: 61 HHRQLVSSLWDYAVTGSIDARLSILVDPLSVFMMLVITGVSTLIHLYSVSYMKSDRGN-- 118 Query: 107 LSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAA 165 Y+ + + F+F+ML++V + N +++ +S L+ + +R + +A Sbjct: 119 ------ARYFAYLNFFVFSMLVLVLAANFLLLIVGWAFVGAASYLLISFWYRRETATKAG 172 Query: 166 WKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFL 225 K +I VG + GT + + ++ + + ++ + L Sbjct: 173 IKAFVINVVGDVGLVLGTFFILRHTGTLDFLGTFEAVENGAFDSHN----GALVAGCLLL 228 Query: 226 LIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDF 284 L+G K+ P H WLPDA E P+PVS+L+ A ++ + ++ R + + A + Sbjct: 229 LVGAFAKSAQVPFHTWLPDAM-EGPTPVSSLIHAATMVTAGVYLISRMFPLFEAAPAAAD 287 Query: 285 PNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHI 344 ++ ++ +A L Q DIKR++AYS++ +G + + + G A L H+ Sbjct: 288 VGAVVG---CATLLIAGTIALTQTDIKRVIAYSTMSQIGYMIMGVSAG---AYAAGLFHL 341 Query: 345 LNHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 L H+ K LLF +G+++ G + L+ + G + MPFT F G LAL+G+PPF+ F Sbjct: 342 LTHAFFKALLFMAAGSIIGAMAGAQSLDKMSGFKRSMPFTFGCFVVGGLALSGVPPFSGF 401 Query: 404 LSEFMTITAGLARNHLL--IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLG--- 458 S+ + R + V+ + L RM R + +P + G Sbjct: 402 FSKDEILAFVGHRGGWFSVMYVVGYIGAFLTGIYTWRMIFRAFLGRPSPEAAELEHGHIA 461 Query: 459 -------------------------------WLTTSPMVILLVMMLAMGTHIPQPVIRIL 487 M +L V +G V ++ Sbjct: 462 HAEYPTNPANGEREDTEVGFPGPEHVIAEREIPMKVAMGLLAVGATILGVLQIPNVTHVI 521 Query: 488 AGASTIVLSGTHDLPAQRS 506 + + S Sbjct: 522 SSFLEPTFESSKYFHEHPS 540 >UniRef50_Q35099 NADH-ubiquinone oxidoreductase chain 5 n=58 Tax=Metazoa RepID=NU5M_METSE Length = 600 Score = 356 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 120/534 (22%), Positives = 222/534 (41%), Gaps = 42/534 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 M+ L+L PLL +L+ ++ + L I+L L ++ T + Sbjct: 1 MYILVLTVPLLGALVSGLFGRKIGEKGAGIFTSGCLIISLSWSLLIFYETTLNFSTTYIK 60 Query: 66 AG-----------LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 L D L + L ++ I L I+S YM + + Sbjct: 61 LWRWLDSDLVTAYFGLQFDSLTAVMLIVVTSISTLVHIFSTAYMDGDPH--------VPR 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICT 173 + + LF F M+L+VTS+N ++ E L S L+ + R + +AA K +++ Sbjct: 113 FMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNR 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 VG + + ++ + + I +L L +FL IG K+ Sbjct: 173 VGDIGFVLAMLAIWDQFGCLDFASVFNIV--------ALAPSDNTTLICLFLFIGAVGKS 224 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 +H WLPDA E P+PVSAL+ A ++ + +LIR ++ QA ++ I Sbjct: 225 AQLGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLLIRSSPLLEQA---PMALMVVTIV 280 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G L+ +AA LVQ D+K+++AYS+ +G + + G+ +L H++NH+ K Sbjct: 281 GSLTAFMAATIGLVQNDLKKVIAYSTCSQLGYMVMACGLSQ---YSISLFHLMNHAFFKA 337 Query: 353 LLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 LLF +G+V+ +D+ + G+++ +PFT + G+L+L G P F S+ + + Sbjct: 338 LLFLSAGSVIHALADEQDMRKMGGLIRSIPFTYTMIVIGSLSLMGFPYLTGFYSKDLILE 397 Query: 412 AGLARNHLLII-VLLLLLLTLVLAGLVRMAARVLMAKPPQAVN----RGDLGWLTTSPMV 466 + +L L + L A +R+ ++ + W T P++ Sbjct: 398 LAYDQYYLAFAHWLGVFSALLTAAYSLRLIYLTFISNTNAKKEVFSQAHEGSWNLTLPLI 457 Query: 467 ILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVS 520 +L + + +G + + S I+ + +P S + S Sbjct: 458 LLALGSIFVGYLTKEIIWSFQITLSPIIPTSIKLMPVIFSLFGAGTAVVLYHYS 511 >UniRef50_P29388 NADH-ubiquinone oxidoreductase chain 5 n=133 Tax=Eukaryota RepID=NU5M_ARATH Length = 669 Score = 356 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 104/503 (20%), Positives = 198/503 (39%), Gaps = 37/503 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQT--------- 56 M+ L++ PLL S + + S + + + +L L + Sbjct: 1 MYLLIVFLPLLGSSVAGFFGRFLGSEGSAIMTTTCVSFSSILSLIAFYEVALGASACYLR 60 Query: 57 --AADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 + E+F A D L + L ++ I L +YSI YM + Sbjct: 61 IAPWISSEMFDASWGFLFDSLTVVMLIVVTSISSLVHLYSISYMSEDPHS--------PR 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICT 173 + + +F F ML++VT +N + ++ E L+S L+ + R + +AA K +++ Sbjct: 113 FMCYLSIFTFFMLMLVTGDNFLQLFLGWEGVGLASYLLIHFWFTRLQADKAAIKAMLVNR 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSS-LLDPTLMLLAFVFLLIGFGTK 232 VG G + + +V A + + L + L IG K Sbjct: 173 VGDFGLALGILGCFTLFQTVDFSTIFACASVPRNSWIFCNMRLNAISLICILLFIGAVGK 232 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLI 291 + +H WLPDA E P+PVSAL+ A ++ + ++ R + S ++ Sbjct: 233 SAQIGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFMIARCSPLFEY---SPTALIVITS 288 Query: 292 FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAK 351 G ++ +AA ++Q D+KR++AYS+ +G + GI ++ H++NH+ K Sbjct: 289 AGAMTSFLAATTGILQNDLKRVIAYSTCSQLGYMIFACGISN---YSVSVFHLMNHAFFK 345 Query: 352 TLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 LLF +G+V+ +D+ + G+ P T + G+L+L G P F S+ + + Sbjct: 346 ALLFLSAGSVIHAMSDEQDMRKMGGLASSFPLTYAMMLIGSLSLIGFPFLTGFYSKDVIL 405 Query: 411 TAGLARNHL---LIIVLLLLLLTLVLAGLVRMAARVLMAKP----PQAVNRGDLGWLTTS 463 + + L + + R+ + D Sbjct: 406 ELAYTKYTISGNFAFWLGSVSVLFTSYYSFRLLFLTFLVPTNSFGRDISRCHDAPIPMAI 465 Query: 464 PMVILLVMMLAMGTHIPQPVIRI 486 P+++L + L +G +I + Sbjct: 466 PLILLALGSLFVGYLAKDMMIGL 488 >UniRef50_B9ZEN4 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZEN4_NATMA Length = 678 Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats. Identities = 135/514 (26%), Positives = 219/514 (42%), Gaps = 46/514 (8%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAAD-------- 59 + L PL+ ++ K ++ + G L +L L V + Sbjct: 9 PAIALFPLVAFVVALTFGKYMPKKGALAGIIATGGSLALSVLMLVAVASGEVYHETLYQW 68 Query: 60 ---------AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPV 110 + + ID L L L I+ +I FL I+S+GYM E G Sbjct: 69 AIGDAASEIGADGIEFTFGILIDPLAALMLVIVSLIAFLVHIFSLGYMNAEGETG----- 123 Query: 111 TLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYI 169 L YY LF F+ML V ++NL++ + E L S L+G + RS+ AA K Sbjct: 124 -LPRYYASLGLFTFSMLAFVYADNLLMAFMFFELVGLCSYLLIGFWFRTRSAPSAAKKAF 182 Query: 170 IICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQS------SLLDPTLMLLAFV 223 ++ G F L G V + A +V + + + T + + + Sbjct: 183 LVTRFGDYFFLLGVVAIAATFGTVAFAGDNSFVTAAETAIDNGDTLFGFGAETWVTITAL 242 Query: 224 FLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGS 282 +L G K+ FP+H WLPDA E P+ VSAL+ A ++ + ++ R S Sbjct: 243 LVLGGVIGKSAQFPLHTWLPDAM-EGPTTVSALIHAATMVAAGVYLVARM---FGYYALS 298 Query: 283 DFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALL 342 ++ G + AA +V+ DIK++LAYS++ G + + LG+G G A + Sbjct: 299 PTALAIIAFVGGFTALFAATMGVVKDDIKQVLAYSTISQYGYMMLGLGVG---GYVAGVF 355 Query: 343 HILNHSLAKTLLFCGSGNVL-LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFN 401 H++NH+ K LLF G+G V+ L + +D+ + G+ P T F GALALAG+ PF+ Sbjct: 356 HLMNHAFFKALLFLGAGAVIVLMHHEQDMWKMGGLKDKAPITYYTFLAGALALAGIIPFS 415 Query: 402 IFLSEFMTITAGLARN-----HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP--QAVNR 454 F S+ + L L + L+ + RM +P A + Sbjct: 416 GFWSKDEILYDALIIGIEEPIILAAYAMALVAVFFTGFYTFRMVFLTFHGEPRSEAAEDP 475 Query: 455 GDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILA 488 D+GW +P+++L V+ L G PV ++ Sbjct: 476 HDIGWSMKAPLIVLGVLALVAGIANLAPVAKLAQ 509 >UniRef50_C7JBM0 NADH-quinone oxidoreductase chain L n=8 Tax=Acetobacter pasteurianus RepID=C7JBM0_ACEP3 Length = 646 Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats. Identities = 124/503 (24%), Positives = 219/503 (43%), Gaps = 37/503 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLI--------LALWVVQTA 57 +F+ +LTPL+ + + + L +GI L LA + T Sbjct: 7 LFSAAVLTPLVGATVAGLGGRFMGDTLAKAVTLLCMGIATLCAIGALWGGWLAGFGHSTV 66 Query: 58 ADAGEIFAAGL----WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 A + A G L D L +A++ V+ L YS+GYM H+ + Sbjct: 67 LLAQWVHAGGFDATWTLRFDALSVTMVAMVLVVSLLVHCYSLGYMSHD-------AMPTY 119 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIIC 172 ++ + LF F ML++V+SN+LI ++ E L+S L+G + R S AA K ++ Sbjct: 120 RFFSYLSLFTFAMLMLVSSNDLIQLFFGWEGVGLASYLLIGYWYDRPSATAAAIKAFVVN 179 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSL--LDPTLMLLAFVFLLIGFG 230 V F L G L+Y +V A A + +L + ++ + + L +G Sbjct: 180 RVADLFFLVGIGLIYVLFHTVQYDAIFAQVPQVLNAPYTLFGISFRMLEVICLLLFVGAM 239 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ +H WLPDA E P+PVSAL+ A ++ + ++ R ++ A + + Sbjct: 240 GKSAQLFLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLMARMSPLLEFAPAT---RTFI 295 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 ++ G + AA +VQ DIKR +AYS+ +G + +G+G A++ H+ H+ Sbjct: 296 ILIGATTCFFAATVGMVQPDIKRTIAYSTCSQLGYMFAAVGVG---AYQASVFHLTTHAF 352 Query: 350 AKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 K LLF G+G+V+ +++ + G+ K +P T + G+LALAG+ PF + S+ Sbjct: 353 FKALLFLGAGSVIHAMHDEQNMFKMGGLWKKLPLTYTVMWIGSLALAGVFPFAGYWSKDA 412 Query: 409 TITAGLARN---HLLIIVLLLLLLTLVLAGLVRMAARVLMAK---PPQAVNRGDLGWLTT 462 + A + + L + L R+ V + + + + Sbjct: 413 ILNALWSTGSSASIYAWSLGTITAFLTAFYSWRLIFLVFHGQAADAHARDAAHESPAVMS 472 Query: 463 SPMVILLVMMLAMGTHIPQPVIR 485 P+V+L + G + I Sbjct: 473 VPLVLLAFGAVVAGILLAPFYIG 495 >UniRef50_Q9K1B0 NADH-quinone oxidoreductase subunit L n=127 Tax=Proteobacteria RepID=NUOL_NEIMB Length = 674 Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats. Identities = 124/526 (23%), Positives = 217/526 (41%), Gaps = 56/526 (10%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATR-TVTVLHSLGITLLLILALWVVQTA-- 57 M+ ++ ++ L PL SL+ + A TVT+L +L LW Sbjct: 1 MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVSAVLSAYVLWGFIDGSR 60 Query: 58 ---------ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 + +D + + + ++ + + IY+IGYM E Sbjct: 61 AKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMVHIYTIGYMHDEK------ 114 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWK 167 V ++ + LF F+ML+++ SNN I ++ EA L S L+G Y +R S A K Sbjct: 115 -VGYQRFFSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGFYFKRPSATFANLK 173 Query: 168 YIIICTVGVAFGLFGTVLVYANAA-SVMPQAEMAIFWSEVLKQSSLLDP---TLMLLAFV 223 +I VG L G LV A S+ Q A + L +L+ + + Sbjct: 174 AFLINRVGDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQNATIQLFPGVEWSLITVTCL 233 Query: 224 FLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGS 282 L +G K+ FP+H WLPD+ E P+P+SAL+ A ++ L ++ R I S Sbjct: 234 LLFVGAMGKSAQFPLHVWLPDSM-EGPTPISALIHAATMVTAGLFMVSRMSPIYE---MS 289 Query: 283 DFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALL 342 ++++ G ++ F ++Q DIKR++AYS++ +G + V LG A+ Sbjct: 290 STALSVIMVIGAITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTVALGAS---AYSVAMF 346 Query: 343 HILNHSLAKTLLFCGSG-NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFN 401 H++ H+ K LLF +G ++ + +D+ + + K MP T + G L+L G P F+ Sbjct: 347 HVMTHAFFKALLFLAAGSAIIGMHHDQDMRHMGNLKKYMPVTWLTMLIGNLSLIGTPFFS 406 Query: 402 IFLSEFMTITAGLAR---NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP--------- 449 F S+ I A +L + + R V + Sbjct: 407 GFYSKDSIIEAAKYSTLPGSGFAYFAVLASVFVTAFYAFRQYFMVFHGEEKWRSLPEHHS 466 Query: 450 -----------QAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVI 484 + N + + T P+++L V + +G +P++ Sbjct: 467 DGHGEEHHGLGKNDNPHESPLVVTLPLILLAVPSVIIGYIAIEPML 512 >UniRef50_Q12ZH4 Na+/H+ antiporter subunit n=2 Tax=Methanosarcinaceae RepID=Q12ZH4_METBU Length = 513 Score = 355 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 123/519 (23%), Positives = 234/519 (45%), Gaps = 27/519 (5%) Query: 2 SYSVMFALLLLTPLLFSLLCFACRKRR---LSATRTVTVLHSLGITLLLILALWVVQTAA 58 S + + LL+ P+L S L R +V++ L +LL+ Sbjct: 4 SMTHLPILLVAVPILMSALMIFLRSNANVQKWLNVSVSLAMMLISIILLLQVWNGGIQVY 63 Query: 59 DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 + GE G+ L D L + + ++ FL +YS+ Y+ + Y+ Sbjct: 64 EVGEWGKYGIVLVADLLSSGMVVLSSIVSFLALLYSLDYIEGRSLNST--------YHSL 115 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLV------GIYGQRSSLEAAWKYIIIC 172 F+L + + + ++ M+ E L+S LV G+ +EA +KY+I+ Sbjct: 116 FNLLVAGLNGTFLTGDIFNMFVFFEILLLASCGLVIANEKGGVTKSSDKMEATFKYLILN 175 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTK 232 +G L +YA ++ + ++ P + + ++ FG K Sbjct: 176 MIGSFVMLIAVASLYATVGTLNMADLSVKISTM---SAAGTLPWHIYAIALLFIVVFGNK 232 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 +FPMH WLPD H APSP+SA+LS V++ ++R + +I + ++++ Sbjct: 233 AAIFPMHYWLPDVHPTAPSPISAMLSGVMIKVGAYGILRIFFLIFRDALF-LLQPIIILL 291 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 ++++ + A + Q D+K+LLAYSSV +G V + +GIG + AAL+++ NH++AK+ Sbjct: 292 ALVTIIIGAVSAVGQNDVKKLLAYSSVSQIGYVFLGIGIGSVYALAAALVYMANHAIAKS 351 Query: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 +LF SG ++ GTRD+ + GM K P ++ F GA+++AG+PP F+++F+ A Sbjct: 352 MLFLTSGGIIHHAGTRDMRHMGGMNKTSPIMSIAFLIGAMSIAGLPPMGGFVAKFILFDA 411 Query: 413 GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVN-----RGDLGWLTTSPMVI 467 GL + + + + L L + R + + + P+V Sbjct: 412 GLRAEYYIPVAIALFFAVFTLFYMFRAWLLMFWGETRDVEEYGEYSSHKPSLMIALPIVS 471 Query: 468 LLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRS 506 L ++ G + +P+I + + ++ + A + Sbjct: 472 LAALVFIFGVY-AEPLIALAQAIAEQLIDPQPYIDAVMT 509 >UniRef50_Q6GBK7 Putative antiporter subunit mnhA2 n=63 Tax=Staphylococcus RepID=MNHA2_STAAS Length = 800 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 129/545 (23%), Positives = 236/545 (43%), Gaps = 56/545 (10%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILA-------LWVVQTAA 58 + LL+ ++ +++ ++R L+ L + I+ + L L + T+ Sbjct: 3 LVYLLIAILVIMAMILLMSKRRALAKYAGYIALVAPVISSIYFLIQIPSVAKLQYLSTSI 62 Query: 59 DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 + L L +DGL +F I+ +IG Y+ Y+ L +Y + Sbjct: 63 PWIKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKD-------NLPRFYFY 115 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVA 177 LF+F+M+ +V S+N I+M+ E T++SS L+ + S A + +I G Sbjct: 116 LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAMQSFMITVFGGL 175 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L G +++Y + + + + + L + L+G TK+ FP Sbjct: 176 ALLVGFIMLYIMTGTNNITEILG-------QADHIKNHGLFIPMIFMFLLGAFTKSAQFP 228 Query: 238 MHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 H WLP A + AP+PVSA L A ++ + +L+R+ ++ S+ ++ G+++ Sbjct: 229 FHIWLPRAMA-APTPVSAYLHSATMVKAGIFLLLRFTPLLG---LSNMYVYIVTFVGLIT 284 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLG--------------IFAALL 342 + + L Q D+K +LAYS++ +G++ +GIGG +F AL Sbjct: 285 MLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHQQDAIASIYVFVLFGALF 344 Query: 343 HILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNI 402 H++NH++ K LF G G + + G+RD+ ++ GM ++ P ++ AL++AG+P N Sbjct: 345 HLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNG 404 Query: 403 FLSEFMTITAGLARNHL---------LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV- 452 FLS+ M + A L I+ + ++ + M V K V Sbjct: 405 FLSKEMFLDALTQTGQLSQFSLISMIAIVFVGVIASVFTFTYALYMVKEVFWTKYDSKVF 464 Query: 453 --NRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDL---PAQRST 507 WL + P +IL+V++ + I+ A V G H + S Sbjct: 465 TKKNIHEPWLFSLPSLILMVLVPVIFFVPNIFGKGIIVLALRAVSGGNHQIDQLAPHVSQ 524 Query: 508 WHDFL 512 WH F Sbjct: 525 WHGFN 529 >UniRef50_C4K6N0 NADH dehydrogenase I chain L, membrane subunit n=37 Tax=Gammaproteobacteria RepID=C4K6N0_HAMD5 Length = 633 Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 112/448 (25%), Positives = 207/448 (46%), Gaps = 21/448 (4%) Query: 49 LALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEV---AHG 105 + + F + L +DGL L+++ +GFL +Y+ YMR + Sbjct: 66 FFFEQTLWQWISTDYFHIPITLMLDGLSLTMLSVVIGVGFLIHLYASWYMRAKHSSHDEK 125 Query: 106 ELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EA 164 E + V ++ + +LF+ +M+++V ++NL++M+ E L S L+G Y + A Sbjct: 126 EQAKVGYARFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTHPANGAA 185 Query: 165 AWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVF 224 A K +I +G F G ++Y ++ + M + + + + + A + Sbjct: 186 AMKAFVITRIGDVFLALGLFILYQQLGTLNIRELMILAPTHLA-----VGSDAITWATLM 240 Query: 225 LLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSD 283 LL G K+ P+ WL DA + P+PVSAL+ A ++ + ++ R + + A Sbjct: 241 LLGGAVGKSAQLPLQTWLADAMA-GPTPVSALIHAATMVTAGVYLIARTHGLFLMAPEIL 299 Query: 284 FPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLH 343 I G +++ +A F LVQ DIKR+LAYS++ +G + + LG+ AA+ H Sbjct: 300 HWA---GIIGAITLLLAGFAALVQTDIKRILAYSTMSQIGYMFLALGV---QAWDAAIFH 353 Query: 344 ILNHSLAKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPP-FN 401 ++ H+ K LLF +G+V+L +++ + G+ K +PF + F G ALA +P Sbjct: 354 LMTHAFFKALLFLSAGSVILACHYEQNIFNMGGLRKPLPFLYLCFLVGGSALAALPVITA 413 Query: 402 IFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLG--W 459 F S+ + N++ +++ L+ L RM V PP+ Sbjct: 414 GFYSKDEILWGAWLHNNIELMIAGLVGAFLTAVYTFRMILIVFHGAPPEHPPYKAAPREI 473 Query: 460 LTTSPMVILLVMMLAMGTHIPQPVIRIL 487 P+ +LL++ +G I P+ +L Sbjct: 474 SHHVPLWVLLILSTFIGALIMPPLAGVL 501 >UniRef50_B2A694 NADH dehydrogenase (Quinone) n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A694_NATTJ Length = 748 Score = 355 bits (911), Expect = 3e-96, Method: Composition-based stats. Identities = 121/516 (23%), Positives = 224/516 (43%), Gaps = 45/516 (8%) Query: 2 SYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA---A 58 S++ L++ PLL S TV+ S +LL + +VQ Sbjct: 11 FTSILPILIIFVPLLGSFGVILISSVSEKLRDIYTVIISAVPLVLLAVMYPLVQQGIVQY 70 Query: 59 DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 + GL +D LG LF A++ +I FL +Y+ Y+ HE +Y F Sbjct: 71 NIEWFLEIGLIFRLDSLGFLFTALISLIWFLATLYATEYISHEHNRN--------RFYFF 122 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAF 178 + L V + +L ++ E +L+S LV + ++ A ++ + G Sbjct: 123 WLFTFGATLGVFVTGDLFGLFVFFEMMSLTSYVLVIHEEDKDAMRAGNLFLFLGIGGGLA 182 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 LFG ++Y N ++ + + + + + +IGFG K G+ P+ Sbjct: 183 ILFGLFIMYFNLETLEIAPMLGDMVAAGVNIP---------VLLLLFIIGFGIKAGIVPL 233 Query: 239 HAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDF----------PNRL 288 H WLP AH AP+P SA+LS +L+ + L R ++++ S Sbjct: 234 HIWLPKAHPVAPTPASAILSGLLIKTGVYGLWRVFLMVMGPASSQEVELYQQYITNWGMG 293 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG------GPLGIFAALL 342 L G++++ + A L+Q K++LAYSSV +G + + LG GP+G ++ Sbjct: 294 LFWIGIITMVLGALMALLQTSAKKMLAYSSVSQVGFIIMGLGAAVYLGTDGPIGFAGGIM 353 Query: 343 HILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNI 402 H++NH+L K LF G + ++ D++ V GM K MPF + F AL +AG+P FN Sbjct: 354 HVINHALFKACLFLIVGAIFIRTHLLDIDRVRGMFKQMPFMGIAFIIAALGIAGVPLFNG 413 Query: 403 FLSEFMTITAGLARNHLLIIV-------LLLLLLTLVLAGLVRMAARVLMAKPPQAVNRG 455 + S+ + A ++L + + L ++ +++ + + K PQ Sbjct: 414 YASKTILHHALSEVSYLTPGTAMFIADKIFVFTSALTVSYFIKLFRGLFLGKLPQEWQNT 473 Query: 456 D--LGWLTTSPMVILLVMMLAMGTHIPQPVIRILAG 489 + + + + + +V+++A+G + + + Sbjct: 474 NFSVAPIIKVVVSVFVVLIIAIGVFPNFVLEQFVMP 509 >UniRef50_C4LLM4 Na(+)/H(+) antiporter subunit n=3 Tax=Corynebacterium RepID=C4LLM4_CORK4 Length = 999 Score = 355 bits (911), Expect = 3e-96, Method: Composition-based stats. Identities = 115/530 (21%), Positives = 205/530 (38%), Gaps = 38/530 (7%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAA 66 + L +L +L + L + + L+ L + Sbjct: 3 LIAIPLFVVLALILVPLFVRLLDRNAGWPLALIFIASAIPLLRKLPDIIDGNPWTWKVTW 62 Query: 67 G-----------LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 L D L F + IG IYS Y+ + Sbjct: 63 IEDFLPNGADVIFSLRADALSTFFALLALGIGAAVFIYSTRYLHGGRGSMS--------F 114 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVG 175 Y F+ ++ +V ++++I+M+ + E +L+S FL+ G + + II+ G Sbjct: 115 YLLMTAFMAAVVTLVLADDVILMFISWELVSLASFFLIARSG-PGGELGSMRTIILTFFG 173 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGL 235 L + + + PTL+ + V + TK+ Sbjct: 174 GLTLLTSLGISAGVTGTTSLSGI-------IHSPEWAHHPTLLSVIAVLIATSACTKSAQ 226 Query: 236 FPMHAWLPDAHSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 FP H WLP+A + A +PVSA L A ++ + +L+R+ + + LL+I GM Sbjct: 227 FPFHFWLPEAMA-ADTPVSAFLHAAAVVKAGIYLLLRFSALFHDDA---WWRGLLIIVGM 282 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLL 354 + +AA F L + D+K+L AYS+V +G + +GIG PL + AA++H L H+L K+ L Sbjct: 283 FTAIMAALFALQKNDLKKLTAYSTVSQLGWIVCTIGIGTPLAMAAAVVHTLAHALFKSSL 342 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 F G V + GTRD+ + + + MP+T + A ++A +PP F+S+ + A Sbjct: 343 FMLIGVVDHQTGTRDIRRLGPIWRKMPWTFSMAVIAATSMAAVPPLFGFISKEGMLDAMA 402 Query: 415 AR-----NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILL 469 L+++ + L A R + + + P I Sbjct: 403 EGELATPATALLLICATVGAILTFAYSYRYVFGGFVDGTRDVSDVHEAPLSLWLPAAIPG 462 Query: 470 VMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASV 519 + L +G +P + + A+ LS H + +H S+ Sbjct: 463 FLSLPLG-FVPGFMNSFVDAAADSALSTHHATHTHLALFHGINVPLMISL 511 >UniRef50_B3DZT2 NADH dehydrogenase subunit L n=2 Tax=Verrucomicrobia RepID=B3DZT2_METI4 Length = 601 Score = 355 bits (911), Expect = 3e-96, Method: Composition-based stats. Identities = 129/486 (26%), Positives = 224/486 (46%), Gaps = 35/486 (7%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHS-LGITLLLILALWVVQTAAD 59 M+ + LLLL+PL + + +A K S ++ V+V + + L ++L + + Sbjct: 1 MNEQFLAWLLLLSPLSSAFIIWAFLKPFPSLSQWVSVGACGIAFLVSLGISLGSIPEPSP 60 Query: 60 AGEI----FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 I + L + D L + L ++ +G + IYS+GYM + + Sbjct: 61 ISWIDVGGLSIQLGMVFDPLSKVMLLVVSGVGLMIHIYSMGYMAEDPGR--------SRF 112 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIII-CTV 174 + LF+ +ML +V + N I+M+ E +SS L+G + ++ S AA + + Sbjct: 113 FAELSLFMLSMLGIVVATNFIMMYIFWELVGVSSYLLIGFWFEKPSAAAAATKAFLANRI 172 Query: 175 GVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 G L G +L + S+M +A + + L+ + + L G K+ Sbjct: 173 GDFGFLLGIILFWTLTGSLMFDPSVASYLK---------NHPLVTIMGLLLFCGCVGKSA 223 Query: 235 LFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFG 293 P+H WLPDA E P+PVSAL+ A ++ + +L R + ++ Q S ++ G Sbjct: 224 QIPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYMLCRIFFVLEQ---SPQALDVIAWTG 279 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 ++ AVAA Q DIKR+LAYS++ +G + + +G AA+ H+ H+ K L Sbjct: 280 AITAAVAALTATQQDDIKRILAYSTMSQLGYMVMAVG---SSATVAAMFHLCTHAFFKAL 336 Query: 354 LFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LF G+G+VL + +D+ + G+ K MP T + F G+ ALAG+P F+ F S+ I Sbjct: 337 LFLGAGSVLHVLHHEQDIWKMGGLWKKMPLTFLTFLIGSCALAGIPGFSGFFSKDTIIEM 396 Query: 413 GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ--AVNRGDLGWLTTSPMVILLV 470 +N +L L L L + R+ P A + + + PM++L Sbjct: 397 VGEKNRVLFW-LALFTAGLTAFYMTRLFVVTFFGPPKTEVAAHAKESPLVMVLPMLVLSF 455 Query: 471 MMLAMG 476 + G Sbjct: 456 FAVVGG 461 >UniRef50_C7M2U8 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U8_ACIFD Length = 625 Score = 354 bits (910), Expect = 4e-96, Method: Composition-based stats. Identities = 114/481 (23%), Positives = 207/481 (43%), Gaps = 46/481 (9%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE--- 62 + ++ PLL L+ A KR + ++ + LALW V A A E Sbjct: 3 LITAVIGFPLLGFLVLLAFGKRIGEPRAGWVGTIATTLSFVAALALWGVVLARPADERVA 62 Query: 63 -----------IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 A + +D L + + + L +YSIGYM + Sbjct: 63 VVRLFTWFRAGPLVAHISFRVDELTVFMVLFVTGVSSLIHLYSIGYMHRDP--------R 114 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYII 170 ++ + +LF+F+M ++V+SNNL + + E S +L+ + +R + A K I Sbjct: 115 FHQFFVYLNLFVFSMTVLVSSNNLPLTFLGWEGVGACSYWLISFWFERPSAASAGKKAFI 174 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 + +G A + GT L+ + SV S +L ++ L + + + Sbjct: 175 VNRIGDAGFILGTALIVDHLHSVSY--------SVILPEAHRLSSGTLEAVALLFFLAAV 226 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ P+ WL DA E P+PVSAL+ A ++ + ++ R + A ++ Sbjct: 227 GKSAQLPLFVWLLDAM-EGPTPVSALIHAATMVTAGVFLMARLSAFVTPAHD---AATVI 282 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 G ++ VAA Q DIK+++AYS+V +G + + +G G AAL ++ H+ Sbjct: 283 AWIGAITAFVAAMAATSQHDIKKIVAYSTVSQLGYMMLGIGTG---AYVAALFLMVTHAF 339 Query: 350 AKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 K L+F SG+V+ G +D+ + + + MP TAV L++AG+PPF+ F S+ Sbjct: 340 YKALIFLASGSVIHSLDGEQDVRRMGALRRFMPITAVTMILAWLSIAGVPPFSGFFSKGS 399 Query: 409 TITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP-----QAVNRGDLGWLTTS 463 + A + ++ + ++ L + R+ V +P + + + T Sbjct: 400 VLEAAF-AHQPVLWAIGVVTAVLTAYYMGRLVYVVFYNEPRYQEVLGERSPHESPRVMTV 458 Query: 464 P 464 P Sbjct: 459 P 459 >UniRef50_Q608Y7 NADH dehydrogenase I, L subunit n=2 Tax=Gammaproteobacteria RepID=Q608Y7_METCA Length = 613 Score = 354 bits (909), Expect = 5e-96, Method: Composition-based stats. Identities = 117/529 (22%), Positives = 218/529 (41%), Gaps = 41/529 (7%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALW---------- 52 + L+ PL L+ R A S+G++ L +L Sbjct: 1 MLKLLCLVPFLPLTGFLILTCSEGRLPRAYVPWIGAGSVGLSAALATSLAFELLTLEPEA 60 Query: 53 ----VVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 A F ++D L L ++ IGFL +YS GYM + Sbjct: 61 RVFRQTLWHWMAAGDFGVDFAFYLDALSLNMLLVVTGIGFLIHVYSAGYMADDPG----- 115 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWK 167 + ++ + +LF+F ML++V ++NL +++ E L S L+G + ++ + AA K Sbjct: 116 ---MARFFAYMNLFVFAMLILVLADNLPLLYLGWEGVGLCSYLLIGFWYEKPENGYAARK 172 Query: 168 YIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLI 227 ++ VG G L+++ ++ Q M+ ++ S+L +LL + Sbjct: 173 AFVVTRVGDTAMALGLFLLFSQLGTLDIQEAMSRAGAQWPAGSTLATAAALLLLGGAV-- 230 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPN 286 K+ P+ WLPDA + P+P+SAL+ A ++ + ++ R + + + Sbjct: 231 ---GKSAQLPLQVWLPDAMA-GPTPISALIHAATMVTAGVYLIARTHALFT---LAPEVQ 283 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 L+ + G +++ ++ F L Q DIKR+LAYS++ +G + + LG+G AA+ H+ Sbjct: 284 TLVAVIGAITLLISGFSALTQTDIKRVLAYSTISQIGYMFLALGVG---AWSAAIFHLTT 340 Query: 347 HSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 H+ K LLF G+G V+L + +D+ + G+ + +P F G AL G+P + + S Sbjct: 341 HAFFKALLFLGAGAVILSLHHEQDIFRMGGLRRSLPLVFWTFLAGLAALVGLPFTSGYYS 400 Query: 406 EFMTITAGLARNHL--LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTS 463 + + + L R+ +R G + Sbjct: 401 KHEILLTAYGAGSAGSWLWAAGTAGAVLTGLYSTRLLLIAFFGPERTPAHRH-YGSNIAA 459 Query: 464 PMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFL 512 P+V+L ++ LA G P+ L T + L + + Sbjct: 460 PLVVLAILSLAGGLA-KLPLFPALPETGTDQAGDSPGLLTTAAPFLGVA 507 >UniRef50_C2FWK2 Possible NADH dehydrogenase (Quinone) n=2 Tax=Sphingobacterium spiritivorum RepID=C2FWK2_9SPHI Length = 679 Score = 354 bits (909), Expect = 6e-96, Method: Composition-based stats. Identities = 123/553 (22%), Positives = 220/553 (39%), Gaps = 59/553 (10%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGIT-LLLILALWVVQTAADAGEIFAA 66 L L P L KR S + + LL + +W +T + F Sbjct: 14 LLTLALPFAAFLYQALLGKRAQSGIIPAIAIALSALFGLLTFVEIWNYRTVHIQTDWFTI 73 Query: 67 G-----LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 G + + ++ L L L I+ VI +YS YM + + Y+ + L Sbjct: 74 GNKTFTVGILLNNLTALMLLIVPVIALPVHLYSRSYMHGDKG--------IHRYWMYLSL 125 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFGL 180 F F ML +V NNL++M+ E +S L+G + + + +A K II +G L Sbjct: 126 FCFAMLGLVMMNNLLLMYIFWELVGFASYLLIGFWFTKESAAQANKKAFIINRIGDLGFL 185 Query: 181 FGTVLVYANAASVMPQAEMA----------IFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 G +VY+ ++ + ++ + + A + IG Sbjct: 186 TGIAIVYSQFGTLNLVELFGSDGLAYQAILSDGQWISPMNNTMPAGWLTAAGIAFFIGAM 245 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ FP+H WLPDA E P+ VS+L+ A ++ + ++ + + ++ ++ Sbjct: 246 AKSAQFPLHVWLPDAM-EGPTSVSSLIHAATMVAAGVFLMATLFPLF-----NETVLLVI 299 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 + G L+ A AA+F L Q DIKR+LA+S++ +G + V +GIG AA+ H+ H Sbjct: 300 AVIGTLTAASAAYFALAQYDIKRILAFSTISQLGYMMVGIGIG---AWDAAIFHLATHVF 356 Query: 350 AKTLLFCGSGNVLLKY-----------GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMP 398 K LLF +G V+ + +DL + G+ K MP T L +LAL+G P Sbjct: 357 FKCLLFLCAGAVIHEMVHLKEKSQQDFDAQDLRNMGGLRKYMPKTFALMALSSLALSGFP 416 Query: 399 PFNIFLSEFMTITAGLARN------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA- 451 + +LS+ + + + + +I V+L+++ L + R+ + + Sbjct: 417 LTSGYLSKDSIVISAFEWSSTHGAVYHIIPVVLIVVSILTAFYIGRLIFKAFFGQLRVPS 476 Query: 452 ---VNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTW 508 + + PM L + P+ A +L + Sbjct: 477 SLTAPMHEAPKMMLIPMFFLALWC-FFPIFSFNPLSYHHAWIVDGLLDQYPYATNPLA-- 533 Query: 509 HDFLPSGTASVSE 521 H +P + Sbjct: 534 HLVIPVILTLGAL 546 >UniRef50_C0WGQ4 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=2 Tax=Corynebacterium RepID=C0WGQ4_9CORY Length = 1002 Score = 353 bits (907), Expect = 8e-96, Method: Composition-based stats. Identities = 115/531 (21%), Positives = 211/531 (39%), Gaps = 43/531 (8%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALW----VVQTAA 58 ++ L++ ++ LL + V + + + + Sbjct: 1 MLILLGALIVATVVAPLLIMNVGRPAFGLLAIVPGVGFVWTLAHFARGTFRDGGTLNYTI 60 Query: 59 DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 + + L +D LGGLF I+ +G L +Y GY + L + G Sbjct: 61 EWMPAAHLAVDLRMDALGGLFSLIILGMGALVLLYCWGYFD-------STRRRLAMFAGQ 113 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVA 177 F M +VTS++L++M+ E T+L S LV Y +R+S AA + +++ +G Sbjct: 114 MVGFATAMFGLVTSDSLLLMYVFWEITSLLSYLLVSYYAERASSRRAAQQALMVTVLGGL 173 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L G L+ A +SE+ + +A V +L+G TK+ + P Sbjct: 174 SMLMGICLLGRQTG--------AWTFSEIHAYDHFPQTPYVTVAIVLILVGALTKSAIVP 225 Query: 238 MHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 H WLP A + AP+PVSA L A ++ + ++ R + + + +++ G+ + Sbjct: 226 AHFWLPGAMA-APTPVSAYLHSAAMVKAGIYLVARLAPDMYEVA---TWHLVVISLGVFT 281 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + + + L Q+D+K +LAY +V +G + + +G + A L HSL K LF Sbjct: 282 MLLGGWMALKQKDLKLILAYGTVSQLGFITSIVAVGSREAMQAGLALTFAHSLFKAALFM 341 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 G + GTRD+ + G+ + PF L AL++AG+PP F+S+ + + + Sbjct: 342 VVGAIDHCSGTRDITKLSGLGRRQPFLYSLALISALSMAGVPPLFGFVSKEAVLESTMHE 401 Query: 417 NHLL------IIVLLLLLLTLVLAGLVRMAARVLM---------AKPPQAVNRGDLGWLT 461 L+ I+V + L +A +R + Sbjct: 402 GLLIGMPRNMILVAYVAGSILTMAYALRFLWGAFASKNLPHDKDGVSAAVATMHKVNVGL 461 Query: 462 TSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFL 512 +L + +A+G I + +G H + WH + Sbjct: 462 WLAPAVLTALTIALGLAPQALSAAIDQHLDSTFGAGEHH---GLALWHGWS 509 >UniRef50_Q895D8 Sodium/proton antiporter shaA n=1 Tax=Clostridium tetani RepID=Q895D8_CLOTE Length = 486 Score = 352 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 117/501 (23%), Positives = 229/501 (45%), Gaps = 25/501 (4%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALW-VVQTAADAG 61 + + + +L P++ ++ R R V + L + ++ + Sbjct: 2 NTAIVLIPILFPMVIAIFIGFGRFRENIRNSIVAITVFLNLFFIIYIFKNKGTAFFTVVK 61 Query: 62 EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 ++L ID LG F ++ ++ T YS+ YM+HE ++ FF + Sbjct: 62 INEFLDIYLKIDKLGVFFSLLVSILWIFTSFYSMEYMKHE--------GKENRFFAFFLV 113 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLF 181 L L + S NL+ ++ E TL++ LV G R +L++ KY+I VG F L Sbjct: 114 TLGVTLGISFSGNLVTLYLFYEVLTLATFPLVIHSGSREALKSGRKYLIYSFVGATFVLL 173 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 G + ++A + + + + + L+ TL+ +++ + +GFG K L P H+W Sbjct: 174 GMIFLFAVTKGLDF-------YPKGIIRDFKLNKTLISTSYIVMFLGFGVKAALVPFHSW 226 Query: 242 LPDAHSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDFP--NRLLLIFGMLSVA 298 LP A AP+PVS+LL AV ++ + LIR + + LL+F +S+ Sbjct: 227 LPKAMV-APTPVSSLLHAVAVVKSGVFALIRITYYVFGGEIVKLIYGRKYLLLFVTISIL 285 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 + +F L Q ++K+ LAYS++ +G + + + I + LLH++NH++ K LF Sbjct: 286 MGSFLALHQSNLKKRLAYSTISQLGYILLGILILNGNSLVGGLLHLINHAVIKITLFFCV 345 Query: 359 GNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH 418 G ++ G D++ + G+ K MP+T F +++L G+PP N F+S++ GL Sbjct: 346 GTIMYTRGKTDIDEIKGIGKEMPYTMWCFTISSISLIGIPPTNGFVSKWYLAQGGLLEGK 405 Query: 419 LLIIVLLLLLLTLVLAGLVRMAARVLMAKPP-----QAVNRGDLGWLTTSPMVILLVMML 473 ++ +LL+ L L+ + K + + + P++++ + + Sbjct: 406 VIFPAILLISALLTAMYLLPIITVAFFKKDEQHKNVEKIEIKEAPKNMLVPIILITCITI 465 Query: 474 AMGTHIPQPVIRILAGASTIV 494 +G + + +L + ++ Sbjct: 466 VLGLYPNPVLNFLLEISKEVI 486 >UniRef50_C2BM70 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=5 Tax=Corynebacterium RepID=C2BM70_9CORY Length = 993 Score = 352 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 111/537 (20%), Positives = 204/537 (37%), Gaps = 42/537 (7%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALW----VVQTAA 58 V+ L+ ++ LL + V + + + + V+ Sbjct: 1 MLVLLGALIAASVVAPLLIMRMGRPAFGILALVPSAGFVWTLVHFLRGTFTDSGAVERTV 60 Query: 59 DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 + L +DGLG LF I+ +G L +Y GY + L + Sbjct: 61 EWMPSANLSFSLRLDGLGALFSLIILGMGALVLVYCWGYFDG-------TRRRLAMFAAQ 113 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVA 177 F M +V ++N ++M+ E T++ S LV Y +R+S AA + +++ +G Sbjct: 114 MVGFATAMFGLVAADNFLLMYVFWEITSILSYLLVSYYAERASSRRAAQQALMVTALGGL 173 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L G +L+ + A + +A V +L G TK+ + P Sbjct: 174 SMLMGIILLGRQTGAWTFSDIAAYQ--------HFAQTPFVTVAIVLILAGALTKSAIAP 225 Query: 238 MHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 H WLP A + AP+PVSA L A ++ + ++ R + + + +++ G+ + Sbjct: 226 AHFWLPGAMA-APTPVSAYLHSAAMVKAGIYLVARLAPSMYEVA---TWHVVVISLGVFT 281 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + + + L QRD+K +LAY +V +G + +G + AAL HSL K LF Sbjct: 282 MLLGGWMALKQRDLKLVLAYGTVSQLGFITSIAAVGSREAMQAALALTFAHSLFKAALFM 341 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 G + GTRD+ + G+ + PF + L++AG+PP F+++ + A + Sbjct: 342 VVGAIDHCSGTRDITKLSGLGRKEPFLFGIAIISGLSMAGVPPLFGFVAKEAVLEATMHE 401 Query: 417 NHLLII------VLLLLLLTLVLAGLVRMAARVLM--------AKPPQAVNRGDLGWLTT 462 L + V +L L +A +R + Sbjct: 402 ELLAGMPRNMMLVAYVLGSILTMAYTLRFLWGAFATKQEVNGTEPAEAVAKMHPVTMGLW 461 Query: 463 SPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASV 519 +L + + +G P+P+ + WH F + S+ Sbjct: 462 LSPALLTALTVVLGVF-PKPLSAAFDQHLNSTFGPKEHSE--LALWHGFSVALGLSM 515 >UniRef50_C7NIQ7 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit n=2 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NIQ7_KYTSD Length = 1003 Score = 352 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 127/540 (23%), Positives = 206/540 (38%), Gaps = 54/540 (10%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAA--------- 58 L+L L+ +L + S L SL + L+ V + Sbjct: 2 LALILAHLVAALCAPMLVRALGSKAFLPLALPSLASVVYLVAKAPAVHAGSTDHPHHEVG 61 Query: 59 ------------DAGEIFAAGLW--LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAH 104 + G+ +D L + ++ IG L IY +GY + Sbjct: 62 QGAGGLPPAVTESWTWVHQLGMNLDFRLDSLSWVLAMVVVFIGTLVLIYCVGYFEDDE-- 119 Query: 105 GELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLE 163 L + G F ML +VT++N++V++ E T++ S L+G R S Sbjct: 120 -----PGLGLFAGSLTAFAGAMLGLVTTDNMLVLYVFWEITSVLSFLLIGHRITSRHSRS 174 Query: 164 AAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFV 223 AA + +II G L G V + S A MA L+ + V Sbjct: 175 AAMEALIITASGGLAMLVGIVGLGQATGSYSISALMA---------HPPEAGPLVTASVV 225 Query: 224 FLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGS 282 LL+G TK+ + P H WLP A + AP+PVSA L A ++ + ++ R+ Sbjct: 226 LLLVGAITKSAMVPFHFWLPGAMA-APTPVSAYLHAAAMVKAGIYLIARFAPAFADL--- 281 Query: 283 DFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALL 342 D +L+ G ++ + A+ L Q DIK +LAY +V +G + + +G G A L Sbjct: 282 DVWKWTVLLLGGPTMLLGAWRSLRQVDIKLVLAYGTVSQLGFLVLVVGHGTQDAALAGLT 341 Query: 343 HILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNI 402 ++ H+L K LF G + GTRDL + G+ + MP A ++AG+PP Sbjct: 342 LLVAHALFKGSLFLVVGAIDHCTGTRDLRRLSGLARSMPVLFATACVSAASMAGVPPLLG 401 Query: 403 FLSEFMTITAGLARNHLLI------IVLLLLLLTLVLAGLVRMAARVLMAKPPQAV-NRG 455 F+S+ T H V +L+ + A R + + + Sbjct: 402 FVSKEGAYTVFNPVEHGWFTVEGVTFVFILVGSMMTFAYSARFLWGAFRTQRTKPLTEVH 461 Query: 456 DLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSG 515 D G+ +L V + +G + L S + H P WH + P Sbjct: 462 DPGFFLQFSPALLAVCTIVLGLTSKTVLEPWLGNYSGWWAASEH--PLHLGLWHGWTPVL 519 >UniRef50_B4RCL7 NADH dehydrogenase I, L subunit n=9 Tax=Proteobacteria RepID=B4RCL7_PHEZH Length = 738 Score = 352 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 110/558 (19%), Positives = 205/558 (36%), Gaps = 94/558 (16%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M V+ +++L PL+ +++ + S L ++ L ++ T Sbjct: 1 MDPKVLVSIILFGPLVGAIVAGLFGRAIPSKVSQAVTTGLLFLSAALSWVVFGQWTWGGL 60 Query: 61 GEI------------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 F + +DGL + L ++ + L +YS GYM + Sbjct: 61 EPFTLTYAPFIHVGDFVSNWSFRLDGLSAVMLVVVTSVSSLVHLYSWGYMAEDPHK---- 116 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAA-WK 167 ++ + LF F ML ++++ + + ++ E L+S L+G + ++ + AA K Sbjct: 117 ----PRFFAYLSLFTFAMLALISAADFMQLFFGWEGVGLASYLLIGFWFKKPTANAASIK 172 Query: 168 YIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLL--DPTLMLLAFVFL 225 ++ VG G + V+ S+ + + S + D L+ LA L Sbjct: 173 AFVVNRVGDFGFALGIMTVFWAFGSIQFAEIFPQMQAAAGRAWSFIGYDWNLVDLACALL 232 Query: 226 LIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDF 284 +G K+ F +H WLPDA E P+PVSAL+ A ++ + ++ + A Sbjct: 233 FVGAMGKSAQFFLHTWLPDAM-EGPTPVSALIHAATMVTAGVYMVCLLSPMFEYA---PV 288 Query: 285 PNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHI 344 ++ + G ++ AA L Q DIKR++AYS+ +G + G+G AA+ H+ Sbjct: 289 AKNIVTVIGAVTALFAATVGLTQNDIKRVIAYSTCSQLGYMFFAAGVG---AYQAAMFHL 345 Query: 345 LNHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALAL--AGMP--- 398 H+ K LLF G+G+V+ +D+ G++K +P T + G +A+ G+P Sbjct: 346 FTHAFFKALLFLGAGSVIHGMAHEQDMRRYGGLVKYLPVTYAVMTIGTIAITGLGIPGVE 405 Query: 399 -PFNIFLSEFMTITAGLARN------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA 451 F F S+ I A V+ + + L R+A Sbjct: 406 LGFAGFYSKDAIIHAAYEAGGAGHPMGYFAFVIGIFVAGLTAFYSWRLAFFTFNGSARWT 465 Query: 452 VN--------------------------------------------------RGDLGWLT 461 + W Sbjct: 466 SEDLEHHWHNRDHAHDGHDDHATAAQIETHDEPLADDAGHGHGHGHGHGPHLPHESPWSM 525 Query: 462 TSPMVILLVMMLAMGTHI 479 P+++L + + G Sbjct: 526 RLPLILLAIGAVFAGIAF 543 >UniRef50_B6YWQ6 Hydrogenase 4, subunit 3 n=2 Tax=Thermococcus RepID=B6YWQ6_THEON Length = 520 Score = 351 bits (902), Expect = 3e-95, Method: Composition-based stats. Identities = 123/519 (23%), Positives = 228/519 (43%), Gaps = 30/519 (5%) Query: 9 LLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQ---------TAAD 59 + + P++F+ + + +G L L+ + Q Sbjct: 6 ITPVIPVIFAFALPLFSIIIKGNRKIIQAYVLIGTGLALVSTFKLFQKTYASDRPLVYTF 65 Query: 60 AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 G G+ +D L L + + FL IYS Y+ HE L YY + Sbjct: 66 GGWSAPVGVIYEVDKLSALIALVTAGLMFLISIYSYRYLEHENG--------LEWYYTLY 117 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAF 178 +L V+ + + ++ IE T++++ LV Y R S+ A KY +I VG Sbjct: 118 LGLEAGLLGVLLTGDAFNLFVMIEVTSIAAYALVMFYRDRGDSVYAGLKYALIGAVGTTM 177 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLML---LAFVFLLIGFGTKTGL 235 ++Y +V A + +++ +A F K + Sbjct: 178 YFLALGILYGAFGTVNLADLTAKVHGMDFPLTGAPVGDIVVASGVALALATWAFLIKAAI 237 Query: 236 FPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD-------FPNRL 288 P H WLP+AH APSP+SA+LS +++N + LIR+ + + + Sbjct: 238 VPNHFWLPEAHPAAPSPISAILSGLVVNVGVYSLIRFLYTVYGGTLIPELARIVSVLSNI 297 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 +++ G +S A + VQ+D+KRL+AYS++ +MG + + +G+G LG+ AAL H++NH+ Sbjct: 298 VVVLGAVSSLFGAAMMTVQKDVKRLIAYSTIMHMGYLFMAVGLGTQLGLQAALFHLVNHA 357 Query: 349 LAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 +AK LLF +G + G+R+++ + G+ K MP L+L G+PP N+F S+ + Sbjct: 358 IAKALLFLAAGAFIHAIGSRNVDDLAGLGKKMPVATFSLAIATLSLVGVPPLNVFFSKLL 417 Query: 409 TITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVIL 468 A + + L ++L++ + L VR+ + + KP + + + + ++L Sbjct: 418 LFNALMEKG-LGPALILVISSVIALVAYVRVFHIIWLGKPRKDIKIKE-HASMSLVCLVL 475 Query: 469 LVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRST 507 V+ + +G P V ++ A+T + + A Sbjct: 476 AVICIIVGLATPIIVDGLINPAATQAMDYNSYINAVLDL 514 >UniRef50_Q9PMA7 NADH-quinone oxidoreductase subunit L n=43 Tax=Epsilonproteobacteria RepID=NUOL_CAMJE Length = 596 Score = 351 bits (902), Expect = 4e-95, Method: Composition-based stats. Identities = 112/495 (22%), Positives = 204/495 (41%), Gaps = 29/495 (5%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWV---VQTAAD 59 + + L +P + L + + ++ L L + Sbjct: 1 MQNLALISLFSPFVAFLFASCFALSEKKQFVGIICSLLVALSAFCSLYLLFCNEAFNVSL 60 Query: 60 AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 ID + ++++G++ YSI YM H+ + ++ + Sbjct: 61 FEWFAGVNFGFDIDAISLTMMSVVGIVATCVHFYSIFYMAHDEGFNK--------FFAYL 112 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVGVAF 178 LF+F+ML +V S+N + ++ E L S L+G + + + AA + I+ + Sbjct: 113 GLFVFSMLFLVMSDNFLGLFVGWEGVGLCSWLLIGFWYKNDTYSFAANEAFIMNRIADLG 172 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 L G +Y A ++ ++ + LD ++L L IG K+ FP Sbjct: 173 MLLGIFWLYLQAGTLKYDEVFSM--------AQSLDHNALILIATCLFIGAMGKSAQFPF 224 Query: 239 HAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSV 297 H WL DA + P+PVSAL+ A ++ + ++IR + + ++ + G Sbjct: 225 HTWLADAMA-GPTPVSALIHAATMVTAGVYLVIRASTLY---DLVPEVSYIIALLGAFVA 280 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 AA LV RD+KR++AYS++ +G + V G+G AL H+ H+ K+LLF G Sbjct: 281 IFAASMALVVRDLKRIIAYSTLSQLGYMFVAAGLG---AYGIALFHLATHAFFKSLLFLG 337 Query: 358 SGNVLLKYGTR-DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 +GNV+ + D+ + G+ K + TA+L G+LALAG+ PF F S+ + + Sbjct: 338 AGNVMHAMNDKLDIKKMGGLFKPLKITAILMCIGSLALAGIYPFAGFFSKDLILGYSFIS 397 Query: 417 NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMG 476 H I ++LL+ L R+ V + + + M L+V+ + G Sbjct: 398 FHHGIFLVLLIAAFLTAFYSFRLLMLVFFTPARHDEHPHEASKIALLAMSPLMVLAIIAG 457 Query: 477 THIPQPVIRILAGAS 491 + Sbjct: 458 FFEHSFFEYLSTKLV 472 >UniRef50_B2V982 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Aquificales RepID=B2V982_SULSY Length = 648 Score = 350 bits (899), Expect = 8e-95, Method: Composition-based stats. Identities = 111/507 (21%), Positives = 217/507 (42%), Gaps = 46/507 (9%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF-- 64 ++ +PL+ ++ + L + ++ +G+ + I ++ A++G+ + Sbjct: 4 LWIIPFSPLIAFVIIGLFGYKLLKEPLS-GIVAVIGVAISAIASVKGFIDVAESGKYYDL 62 Query: 65 -----------AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 + + + D L L ++ + I++ GYM+ + ++ Sbjct: 63 KLFNWLTIGDYSISVSIFWDPLSALMTCVVTCVSTFIFIFATGYMKGDESY--------P 114 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIIC 172 ++ + LF+F ML++ S+NL+ ++ E L+S L+G + + + AA + ++ Sbjct: 115 RFFAYLSLFVFMMLMLTLSDNLVQLFFGWEGVGLASYLLIGFWHYKKSAANAAMEAFVVN 174 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTK 232 VG L G +L + ++ +D ++ + L G K Sbjct: 175 RVGDWLFLLGILLAFTTFGTLDYLQIFNKL--------HGMDYIIVTFIALLLFGGAVGK 226 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLI 291 + P+H WLP+A E P+PVSAL+ A ++ + ++ R + S+ +L Sbjct: 227 SAQIPLHIWLPNAM-EGPTPVSALIHAATMVAAGVYMVARLMPVF---ASSEIALDTVLF 282 Query: 292 FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAK 351 G +S +AA LVQ DIKR++AYS++ +G + G+G + H+ +H++ K Sbjct: 283 IGTMSAFLAATMGLVQNDIKRIIAYSTLSQLGYMFAAEGLGL---FSEGMFHLTSHAVFK 339 Query: 352 TLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 LLF GSG+VL+ + D+ + + ++MP T F G+LALAG+PPF F S+ I Sbjct: 340 ALLFLGSGSVLIALHHLLDVQKMGQIGRLMPITMGTFLIGSLALAGIPPFVGFFSKDPII 399 Query: 411 TAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV----NRGDLGWLTTSPMV 466 N L L L + R+ + + T P++ Sbjct: 400 EGAYEINT-FAFTFLWLGAFLTAFYIFRLFFLTFFDGDRLDHHIREHVHESPPNMTIPLI 458 Query: 467 ILLVMMLAMGTHIPQPVIRILAGASTI 493 +L + +G + I L + Sbjct: 459 VLATATVILG-FFREFFINFLKPSLDP 484 >UniRef50_B8I2P6 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Clostridium RepID=B8I2P6_CLOCE Length = 495 Score = 350 bits (899), Expect = 8e-95, Method: Composition-based stats. Identities = 188/494 (38%), Positives = 301/494 (60%), Gaps = 5/494 (1%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 M A ++ P+L L + + + + ++ + G+ +L IL+L + Sbjct: 1 MIAAFVVIPVLAGGLVWISKNKF--FIHAINLIGASGLLVLSILSLININKYKVISSSGL 58 Query: 66 AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFT 125 ++D L G L I + FL +YSI Y E+ + ++ L YY + F+ + Sbjct: 59 FKNIFYMDSLSGYILFITTLAFFLVSLYSISYFGQELKNKVITIRKLKLYYSLSNAFVLS 118 Query: 126 MLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVL 185 M+L +T+ N+ VMW +IEATTL+SAFLVG Y + ++EAAWKY+IIC+VG+ F L G +L Sbjct: 119 MILALTTRNMGVMWISIEATTLASAFLVGFYNNKRAIEAAWKYLIICSVGITFALLGIIL 178 Query: 186 V-YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 + Y++ + + WS ++K +S LDP+++ +AF+F+LIGFGTK G PMH WLPD Sbjct: 179 LFYSSTVKLGGARISGMDWSYLIKYASALDPSILKIAFIFILIGFGTKVGFSPMHTWLPD 238 Query: 245 AHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD-FPNRLLLIFGMLSVAVAAFF 303 AHS+APSPVSALLS VLLN A+ +IR I+ + +GS + LL++ +LS+ AA F Sbjct: 239 AHSQAPSPVSALLSGVLLNTAMYGVIRVMSIVNKCLGSSNYTGNLLIVLSVLSIGTAAVF 298 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLL 363 ILVQ+D KR+LAYSS+E+MG++A+ LG+ P+ IFAAL H NH++ K +LF +GNV L Sbjct: 299 ILVQQDYKRILAYSSIEHMGIIALGLGVCTPISIFAALYHTFNHAMTKLMLFLATGNVYL 358 Query: 364 KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIV 423 K+ T+ ++ + G++K MP T ++F G A+ GMPPF +F+SEF T+ + ++ Sbjct: 359 KHHTKKISSIRGLIKTMPVTGIVFVLGTFAITGMPPFGVFMSEFNTVVGTIFSKRYIVTA 418 Query: 424 LLLLLLTLVLAGLVRMAARVLMAKPPQA-VNRGDLGWLTTSPMVILLVMMLAMGTHIPQP 482 LLL+ L++V AG + ++ + +G++ + + ++ILL + + G +IP P Sbjct: 419 LLLIFLSMVFAGFTKQLGKMFYGNNSNPQIKKGEIDIIGPAVLIILLCITVLAGIYIPVP 478 Query: 483 VIRILAGASTIVLS 496 ++ + I+L Sbjct: 479 FKELMENTTDIILG 492 >UniRef50_C6XJX2 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=cellular organisms RepID=C6XJX2_HIRBI Length = 761 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 109/526 (20%), Positives = 200/526 (38%), Gaps = 53/526 (10%) Query: 17 FSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLG 76 ++ A L + + T +++A W+ A A + ID + Sbjct: 77 GLVVMAALCAASLFFAQFFAASSGVADTQSVLIARWIDVGAMQANW------AIRIDTMS 130 Query: 77 GLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLI 136 + + ++ + L IYS GYM H++ ++ + LF F ML+++T++N + Sbjct: 131 IVMMFVVTSVSSLVHIYSWGYMSHDMGR--------ARFFTYLSLFTFMMLMLITADNFL 182 Query: 137 VMWAAIEATTLSSAFLVGIYGQRSSLEAA-WKYIIICTVGVAFGLFGTVLVYANAASVMP 195 ++ E L+S L+G + + S AA K + VG G + V+ +V Sbjct: 183 QLFFGWEGVGLASYLLIGFWYHKPSANAASIKAFVTNRVGDVGFALGIMTVFLVFGTVEF 242 Query: 196 QAEM----------------AIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 A +V+ + M + V L IG K+ +H Sbjct: 243 APVFEAIKTNATVTPFAFGEAGHAQDVVISVLGVTAPAMEIIGVLLFIGAMGKSAQLLLH 302 Query: 240 AWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 WLPDA E P+PVSAL+ A ++ +++++ I + + + ++ G + Sbjct: 303 VWLPDAM-EGPTPVSALIHAATMVTAGVVLVVLCSPIYE---FTTYASAMITFIGAATAI 358 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 AA L+Q DIKR++AYS+ +G + G+G AA+ H+ H+ K +LF + Sbjct: 359 FAATVALMQNDIKRVIAYSTCSQLGYMFFAAGVG---AYDAAMFHLFTHAFFKAMLFLTA 415 Query: 359 GNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALAL--AGMP----PFNIFLSEFMTIT 411 G V+ +D+ + G+ MP ++ G LA+ G+P F F S+ + Sbjct: 416 GAVIHGLADEQDMRKMGGLRAKMPIAWLMMLIGTLAITGVGIPGTHIGFAGFFSKDAILE 475 Query: 412 AGLARNHL---LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV----NRGDLGWLTTSP 464 + ++ L R+ K + D + P Sbjct: 476 EAFLSGGMYAQFAFWAGIVAALLTSFYSWRLMIMTFHGKTRANKHDFDHAHDAPLVMGMP 535 Query: 465 MVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHD 510 + +L + G I L + + T HD Sbjct: 536 LYLLAGGAVLAGVVFYSAFIGDLTKVNKDFWGSSIYKAEIAETSHD 581 >UniRef50_C9RJK6 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJK6_FIBSS Length = 647 Score = 349 bits (897), Expect = 1e-94, Method: Composition-based stats. Identities = 125/542 (23%), Positives = 216/542 (39%), Gaps = 44/542 (8%) Query: 7 FALLLLTPLLFSLLCFAC-----RKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG 61 L+ L PLL ++ A ++ A V L L L + + G Sbjct: 4 LGLIPLFPLLGCIILGAIAIISSGSKKGPAEGFVGTLAVLFPALSFAGVALLSLNMPEGG 63 Query: 62 -----------EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPV 110 +F + DGL + L + IG L +YSIGYM + Sbjct: 64 VRETLCNWIDIPMFRVDIGFLFDGLSRIMLLFVTGIGSLIALYSIGYMHGDRG------- 116 Query: 111 TLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYI 169 Y+ + +LFLF+M+++V S+NL++ + E L S L+G + + + AA K Sbjct: 117 -FARYFAYINLFLFSMIVLVLSDNLLLTFLGWEGVGLCSYLLIGFWNKDIKNCHAANKAF 175 Query: 170 IICTVGVAFGLFGTVLVYANAAS--VMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLI 227 I+ VG L G + + S + + L ++ +A + I Sbjct: 176 IVNRVGDIGFLLGMLCLVTIGGSAILNYDVLTNFISMVISGNHVDLVIPVLSIAGILFFI 235 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPN 286 G K+ P+ WLPDA + P+PVSAL+ A ++ + +L R + Sbjct: 236 GCTGKSAQIPLLTWLPDAMA-GPTPVSALIHAATMVTSGVYLLARLGSMF---ALLPVVL 291 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 ++++ GML+ AA L Q DIK++LAYS++ +G + + G+ A++ H+ Sbjct: 292 DIIVVVGMLTAFWAAVAGLFQNDIKKVLAYSTISQLGYMFMASGV---CAFDASIFHVFT 348 Query: 347 HSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 H+ K LF G+G V+ G +D+ + G+LK P TA + LA+ G P F+ F S Sbjct: 349 HAFFKAALFLGAGAVIHALSGEQDMRKMGGLLKKTPVTACVMIFAFLAIVGFPGFSGFWS 408 Query: 406 EFMTITAGLARNHL--LIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLGW 459 + + + + + V+ L+ + + R+ + + Sbjct: 409 KDLILEKIFMSGTMGQAVYVVGLITAVITAVYMGRLIILTFFGSYRGSKESEEHIHEAPA 468 Query: 460 LTTSPMVILLVMMLAMG-THIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTAS 518 + PMVIL + G I+ A V+ H P A+ Sbjct: 469 VMLIPMVILAFGAVFAGYLWADSIGIKFFAETLAPVVGAAQAYNTPAVVAH-VNPVVFAA 527 Query: 519 VS 520 + Sbjct: 528 LG 529 >UniRef50_Q2C5U2 NADH-plastoquinone oxidoreductase, chain 5 n=2 Tax=Photobacterium RepID=Q2C5U2_9GAMM Length = 626 Score = 349 bits (897), Expect = 1e-94, Method: Composition-based stats. Identities = 108/496 (21%), Positives = 199/496 (40%), Gaps = 42/496 (8%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAAD--- 59 + L+ PL + L K + + S+ ++ +L LW+ Sbjct: 1 MNTWLWLIPAAPLFSAALIVLFGKHFPTRASGILASLSVLVSAVLTGMLWLSSDFNPAFH 60 Query: 60 ---AGEIF----AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 + + L +D L + + + +GFL ++S+ +MR + Sbjct: 61 QQLWTWMAVGDWNVNIGLSVDRLSLVMITVTSWVGFLIHLFSVPFMRRDFGE-------- 112 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIII 171 Y+ + +LF+ ML V ++NLI+++ E L S L+ Y + ++ + K ++ Sbjct: 113 RRYFCYLNLFVAGMLFFVMADNLILLYTGWEIMGLCSYGLISHYYNKEKNVYSGRKAFVV 172 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 +G G +L + +V I ++ L+ + L G Sbjct: 173 TRIGDTLLAIGILLAFTVFKTVNLNEIYTI------ASQQSMNLWLIGAICLLFLFGGMA 226 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ FP H WLP++ + PS VSAL+ A ++ + ++ R +++ + + Sbjct: 227 KSAQFPFHVWLPESMA-GPSTVSALIHAATMVTAGVYLIARNHVLFNLVPDVTWW---VS 282 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 + G + AA L Q DIKR+LAYS++ +G + LG+G A+ H++ H+ Sbjct: 283 LVGAFTAFYAATCALAQNDIKRILAYSTISQIGYMFAALGVG---AYDLAIFHVIVHACF 339 Query: 351 KTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPP-FNIFLSEFM 408 K LLF SG ++ + D+ + G+ K +P+ + G+ +LA +P F S+ Sbjct: 340 KALLFISSGVIIDMFNHDHDIRKMGGLGKRLPWLKWTYLAGSASLAALPVITASFFSKDA 399 Query: 409 TITAG-LARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGD------LGWLT 461 I A L+ L L RM V + A + L W Sbjct: 400 IIAATETGHLGWLLGALGLAGALFTSIYSFRMYFMVFNGENRTAFSEPRYLKNNGLPWQM 459 Query: 462 TSPMVILLVMMLAMGT 477 IL V +A+G Sbjct: 460 KVSTGILAVGSIAIGW 475 >UniRef50_D2RZ77 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RZ77_9EURY Length = 681 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 126/490 (25%), Positives = 203/490 (41%), Gaps = 46/490 (9%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAAD-------- 59 + L PL ++ ++ + + L + V + Sbjct: 13 PAIALFPLAAFVISLVFGRQLPKKGAIPGIFATAASLLFSLWMFATVASGETYHETLYEW 72 Query: 60 ---------AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPV 110 E A L ID L L L I+ ++ FL ++S+GYM E G Sbjct: 73 SAGAVTTEVGAEEIAFSFGLLIDPLSALMLIIVSLVAFLVHVFSLGYMNDEGETG----- 127 Query: 111 TLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYI 169 L YY LF F+ML V ++NL++ + E L S L+G + +S+ AA K Sbjct: 128 -LPRYYASLGLFTFSMLAFVYADNLLMAFMFFELVGLCSYLLIGFWFRTKSAPSAAKKAF 186 Query: 170 IICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLD------PTLMLLAFV 223 ++ G F L G V + + +V E + + T + + + Sbjct: 187 LVTRFGDYFFLIGVVAIASTFGTVAFAGEESFVVAAETAIEDGTTLFGFDAQTWVTITGL 246 Query: 224 FLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGS 282 +L G K+ FP+H WLPDA E P+ VSAL+ A ++ + ++ R S Sbjct: 247 LVLGGVIGKSAQFPLHTWLPDAM-EGPTTVSALIHAATMVAAGVYLVARM---FGYYALS 302 Query: 283 DFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALL 342 ++ G + AA +V+ DIK++LAYS++ G + + +G+G G A + Sbjct: 303 PTALAIIAFVGGFTALFAATMGVVKDDIKQVLAYSTISQYGYMMLGMGVG---GYVAGVF 359 Query: 343 HILNHSLAKTLLFCGSGNVL-LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFN 401 H++NH+ K LLF GSG V+ L + +D+ + G+ P T F GALALAG+ PF+ Sbjct: 360 HLMNHAFFKALLFLGSGAVIVLMHHEQDMWKMGGLKDKAPVTYYTFLAGALALAGIVPFS 419 Query: 402 IFLSEFMTITAGLARNH-----LLIIVLLLLLLTLVLAGLVRMAARVLMAKPP--QAVNR 454 F S+ + L L + LL + RM +P A N Sbjct: 420 GFWSKDEVLFDALIVGLEEPVILAAYAMGLLGVFFTGFYTFRMVFLTFHGEPRSETAENP 479 Query: 455 GDLGWLTTSP 464 +GW +P Sbjct: 480 HGVGWSIKAP 489 >UniRef50_Q47T29 NADH dehydrogenase (Quinone) n=4 Tax=Actinomycetales RepID=Q47T29_THEFY Length = 982 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 119/519 (22%), Positives = 203/519 (39%), Gaps = 35/519 (6%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLL-----ILALWVVQTAADA 60 M LL+ +L RK A + ++ + L ++A Sbjct: 1 MIWLLVAHFTAAALAPALVRKWGRQAFFALALVPASAAIWALPRAPGVIAGEPELFFLPW 60 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 + L +D L + L + IG L +Y Y + L + G Sbjct: 61 APNYQLALAFRMDALSLVMLLLAAGIGALILLYCARYFSDDE-------PGLGRFAGVLT 113 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYIIICTVGVAFG 179 F M+ +V +N+LI ++ E TT+ S L+G Y +R + AA I + T+G Sbjct: 114 GFAGAMIGLVLANDLIQLYLYWELTTVFSYLLIGHYPERRDNRRAAAMAINVTTMGGLTM 173 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L G V++ +A + + +A T + +A V +L+G +K+ +FP Sbjct: 174 LVGLVILGESAGTYLISGILA----------EPPSGTAVTVALVLILVGALSKSAIFPFS 223 Query: 240 AWLPDAHSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 WLP A +AP+PVSA L A ++ + ++ R +I G ++ Sbjct: 224 LWLPAAM-QAPTPVSAYLHAAAMVKAGVYLIARLTPAFGDIPA---WQYTAVILGTATMI 279 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 + + L Q D+K LLA+ +V +G + GIG A L + H+L K LF Sbjct: 280 GSGWRALRQHDLKLLLAHGTVSQLGFLTAIFGIGTRDAALAGLAMLCAHALFKAPLFLVV 339 Query: 359 GNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH 418 G + GTRDL + G+ K MP +++AG+PP F ++ A + Sbjct: 340 GIIDHSTGTRDLRELSGLRKKMPVVFWTSVVALMSMAGLPPMAGFAAKEAAFGAFEHADT 399 Query: 419 LLIIVLL---LLLLTLVLAGLVRMAARVLMAKPPQAVNR--GDLGWLTTSPMVILLVMML 473 LL + L ++ + +R K + G L +P ++L + L Sbjct: 400 LLATLALAGVVVGTLFTVGYSLRFLWGAFFDKENTSPTPLLHPPGPLFVAPAIVLAALSL 459 Query: 474 AMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFL 512 G + + + + G PA + WH F Sbjct: 460 LGGFGAS--LADPVFASYADTVPGAGHDPAHLALWHGFS 496 >UniRef50_A6DPK7 NADH-ubiquinone/plastoquinone family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPK7_9BACT Length = 766 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 128/524 (24%), Positives = 226/524 (43%), Gaps = 26/524 (4%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M AL+ L L +R + V I + D Sbjct: 1 MFLLFSVALIFLAAFATPALARFIPNKRRALFAIVPATSFYLIFSKAQEIASGTSLSEDY 60 Query: 61 GEIFAAGLW--LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 I G+ +DGL L ++ IG L IY+ GY++ A+ +Y Sbjct: 61 TWIPRFGINLNFRLDGLSFLMALLITGIGTLILIYAAGYLKDYKAN--------TRFYTI 112 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVA 177 +F+ ML +V S+NLI M+ E TT+SS LVG + + + A + +I+ G Sbjct: 113 IQIFMAAMLGLVLSDNLISMFIFWELTTVSSFLLVGFNHENPDARKKALQALIVTAGGGL 172 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L G +L+ A + + + + L + + +G TK+ FP Sbjct: 173 AMLAGLLLLGNIAGTYQVSEL-------IQHSELIKNHKLYEAVVILVCLGAFTKSAQFP 225 Query: 238 MHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 H WLP+A + AP+PVSA L A ++ + +L R ++ G+DF LL+ G + Sbjct: 226 FHFWLPNAMA-APTPVSAYLHSATMVKAGVFLLARLTPVLG---GTDFWMYLLVCVGGFT 281 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + +AA L+ RD+K++LAYS++ +G++ + +G+G AA++ + H+L K LF Sbjct: 282 MLLAATLGLIYRDLKKILAYSTLSVLGIITLLIGMGTEFSFKAAIMMLFAHALYKATLFM 341 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 +G++ + GTRD+ + G+ K+MP+T AL+ AG PPF FL++ + L Sbjct: 342 VAGSIDHEAGTRDITKLRGLRKVMPWTFAAAALAALSQAGFPPFTGFLAKEYFYGSALDH 401 Query: 417 N-HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAM 475 N ++I + + ++ + + + + ++ + + L + L Sbjct: 402 NLKAVLISSAFISSMFLFVLAFKIGFQPFLGRANKKIHAHEAPPSMLLGPIALGSLSLLF 461 Query: 476 GTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASV 519 G IL+ A + H P + WH + S+ Sbjct: 462 GLFPGPIAKYILSPALASFTTSFH--PVKLKLWHGVNTALILSL 503 >UniRef50_B0VE74 pH adaptation potassium efflux system transmembrane protein n=22 Tax=cellular organisms RepID=B0VE74_ACIBY Length = 949 Score = 348 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 135/535 (25%), Positives = 235/535 (43%), Gaps = 35/535 (6%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLL------ILALWVV 54 M SV+ ++LL +L + L ++ T + SL LL +L + Sbjct: 1 MDTSVLPIIILLPLILGTTLVSLLQRFSRGVTALGAIGVSLTSFGLLLTQAKTVLGGASI 60 Query: 55 QTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 Q + D L +D LG LF ++ IG L + +L Sbjct: 61 QQSWDWLPQLGINLSFRLDALGLLFSLLITGIGTLIY--------IYAYYYLGPKNSLSK 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYIIICT 173 Y LF+ ML + SNNLI++ E T++SS LVG + ++ + + I Sbjct: 113 LYLLLMLFMAAMLGISLSNNLIILLVFWELTSISSFLLVGYWSHYEAAQRGSRMALTITG 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 +G L G VL+ + + + + + L + + +L+G TK+ Sbjct: 173 MGGLAMLGGFVLLGQITGTYEINDIVGM-------KDLIQSHYLFVPTLLLILLGAFTKS 225 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 FP H WLP+A + AP+PVSA L A ++ + +L R I IG+ + ++ Sbjct: 226 AQFPFHFWLPNAMA-APTPVSAYLHSATMVKAGIFLLARLAPIF---IGAALYHNIVTFV 281 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G+ ++ +AA F + + D+K LLAYS++ ++GL+ LGIG PL + AA+ HI+NH+ K Sbjct: 282 GLFTLCMAACFAIFKEDLKGLLAYSTISHLGLIVCLLGIGSPLAVAAAIFHIINHATFKA 341 Query: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM---- 408 LF +G + + GTRDL + G+ +++PFTA L A ++AG+P N F+S+ M Sbjct: 342 ALFMIAGIIDHETGTRDLRKLSGIWQLLPFTATLTMITAASMAGVPLTNGFISKEMFFTE 401 Query: 409 TITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLM----AKPPQAVNRGDLGWLTTSP 464 + + + ++ L ++ +R+ V K N + +P Sbjct: 402 LLASLSGSTVIFASIIATLAGIFAVSYSIRLVHGVFFDGPVGKQVPNKNAHEPPIGMRAP 461 Query: 465 MVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASV 519 ++L + + +G V ++ + L + WH F S+ Sbjct: 462 AILLATLCILVGIFPALLVEPLVNSVTRASLMQPDFAGTHLAIWHGFNAPLIMSI 516 >UniRef50_Q466B6 F420H2 dehydrogenase subunit L n=5 Tax=Methanosarcinales RepID=Q466B6_METBF Length = 667 Score = 348 bits (894), Expect = 3e-94, Method: Composition-based stats. Identities = 118/520 (22%), Positives = 214/520 (41%), Gaps = 46/520 (8%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVV------QT 56 L+ L P L ++ F ++ S V +L ++ ++ + Sbjct: 1 MEEFAFLIPLLPALAFVITFFFGRKMPSGGAIVPILAIAASFVISLMITLRLLANPDEVI 60 Query: 57 AADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 + + + ID L + L+++ + L IY++ YM + Y+ Sbjct: 61 SQSYPWFAVLNIGVLIDPLAAVMLSMVSFVSLLIHIYAVSYMSGDPGE--------ARYF 112 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKY-IIICTVG 175 LF ML +V S+N++ ++ + E L S L+G + +R S AA K + +G Sbjct: 113 AETALFTAAMLSLVLSDNILQLFVSWELVGLCSYLLIGFWFERPSAAAAAKKAFLTTRIG 172 Query: 176 VAFGLFGTVLV---------YANAAS----VMPQAEMAIFWSEVLKQSSLLDPTLMLLAF 222 L G +++ + S + + + + + Sbjct: 173 DVMFLTGIIVLTSDILKLAGGFQDGTYLLRFDEIFSYIPQLSALQTNIFGFEVSHLTIIT 232 Query: 223 VFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIG 281 + G K+G FP+H WLPDA E P+ VSAL+ A ++ + ++ R + + A Sbjct: 233 LLFFGGAVGKSGQFPLHVWLPDAM-EGPTTVSALIHAATMVTAGVYLVARTFPMFIAAPD 291 Query: 282 SDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFA-- 339 S ++ G + A +V D+KR+LAYS++ +G + + LG+G +G+ A Sbjct: 292 S---LMVVAYLGGFTALFAGTMGIVMNDLKRVLAYSTISQLGYMMLGLGLGSAIGLEAIG 348 Query: 340 -ALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALA--G 396 +L H++NH+ K LLF +G+V+ GT+D+ + G+ K+MP TA ALALA G Sbjct: 349 ISLFHLINHAFFKALLFLCAGSVIHAVGTQDMRELGGVRKVMPVTAATMAIAALALAGFG 408 Query: 397 MP----PFNIFLSEFMTITAGL----ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP 448 +P + F S+ I A N+ + + L + R+ KP Sbjct: 409 IPGTSIGTSGFFSKDAIIEAAYLFGENSNNWIPYAFSIAAALLTSIYIFRLIFMTFTGKP 468 Query: 449 PQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILA 488 + + + T P+ IL + L G + L Sbjct: 469 RSDYHGHESPAIMTIPLSILAIFSLVFGGLTKTGFMNFLE 508 >UniRef50_C2KMP0 NADH dehydrogenase (Quinone) n=2 Tax=Mobiluncus mulieris RepID=C2KMP0_9ACTO Length = 710 Score = 348 bits (894), Expect = 3e-94, Method: Composition-based stats. Identities = 112/530 (21%), Positives = 216/530 (40%), Gaps = 51/530 (9%) Query: 9 LLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL-------------WVVQ 55 L++ PL+ +L +R + ++VL S + L V Sbjct: 69 LMIAIPLVSALFLLVAGRRVDAWGHWLSVLASWVAFGIGGGVLVEMLGRAPEARAQAVTL 128 Query: 56 TAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 G L +D L F+ ++ +G L +YS+GYM H+ + Sbjct: 129 WQWLPGTELQVNFGLLLDPLSISFVMLVTFVGSLIHVYSVGYMEHDPDR--------RRF 180 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTV 174 + + +LF+ ML +V N+ +V++ E L+S L+G + Q ++ AA K ++ V Sbjct: 181 FAYLNLFVAAMLTLVLGNSYLVLFMGWEGVGLASYLLIGFWNQVHNNALAAKKAFVMNRV 240 Query: 175 GVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 G L + ++A +V + + +FLL+ K+ Sbjct: 241 GDLGLLIAMMAMFARFGAVDFATVLGE------PAGNSGGIPWATFIGMFLLLAACGKSA 294 Query: 235 LFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFG 293 FP+ AWL DA + P+PVSAL+ A ++ + +++R I Q + + I G Sbjct: 295 QFPLQAWLGDAMA-GPTPVSALIHAATMVTAGVYLMVRSGAIYVQ---TPVAALAVAIIG 350 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 +++ A + D+K++LA S++ +G + + G+G P+G A+ H++ H K Sbjct: 351 AITLVFGAVVGCAKDDMKKVLAASTMSQIGYMMLGAGLG-PVGWAFAIFHLVMHGFFKAQ 409 Query: 354 LFCGSGNVLLKYGTR-DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LF +G V+ + ++ G+ ++M T F G LA+ G+PPF+ F S+ I A Sbjct: 410 LFLAAGCVMHAMSDQVNMRRFGGLRRVMKITWFAFLVGWLAILGIPPFSGFFSKDKIIEA 469 Query: 413 GL-------ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP-------QAVNRGDLG 458 + + L+ + + R+ + P V+ + Sbjct: 470 AFLPNPHYGEWYPWVFGLTALVGAGITAFYMSRLFFLIFHGSPRWTTELEGAPVHPHEAN 529 Query: 459 WLTTSPMVILLVMMLAMG--THIPQPVIRILAGASTIVLSGTHDLPAQRS 506 T P+++L V +A G + ++ L ++ + + Sbjct: 530 AWMTVPLLVLSVFSIAAGGVLSVGNVFVQWLDPVLSVSAASLGASGEHAA 579 >UniRef50_Q4UWA7 NADH-ubiquinone oxidoreductase NQO12 subunit n=52 Tax=cellular organisms RepID=Q4UWA7_XANC8 Length = 727 Score = 348 bits (894), Expect = 3e-94, Method: Composition-based stats. Identities = 118/557 (21%), Positives = 218/557 (39%), Gaps = 93/557 (16%) Query: 6 MFALLLLTPLLFSLLCFACRKR-RLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI- 63 + ++L PL+ S++ ++ + VT+L +L L L+ + + Sbjct: 9 LLIAVVLAPLVGSIVAGLFGRQVGRKGAQYVTILGVAVSCVLSCLTLYQLVELGASPFNQ 68 Query: 64 ----------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 ++A + +D L + + ++ + L IY+IGYM + + Sbjct: 69 NLYTFFDVGNYSAHVGFMVDRLTAMMMVVVTFVSLLVHIYTIGYMEEDPGYQ-------- 120 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIIC 172 ++ + LF F+ML +V SNN + ++ EA L S L+G + +R ++ A K ++ Sbjct: 121 RFFSYISLFTFSMLTLVMSNNFLQLFFGWEAVGLVSYLLIGFWFKRPTAVFANMKAFLVN 180 Query: 173 TVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDP---TLMLLAFVFLLIGF 229 VG + G V S+ A + + L ++M L + L IG Sbjct: 181 RVGDFGFILGIAGVLLWFGSLDYSTVFANATTMAGAKVQLFAGHEWSVMTLICICLFIGA 240 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRL 288 K+ P+H WLPD+ E P+P+SAL+ A ++ + ++ R + S+ Sbjct: 241 MGKSAQVPLHVWLPDSM-EGPTPISALIHAATMVTAGIFMVARMSPLFE---LSETALNF 296 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 +L G + +VQ DIKR++AYS++ +G + V LG+ AA+ H++ H+ Sbjct: 297 ILFIGATTAFFTGLIGIVQNDIKRVVAYSTLSQLGYMTVALGVS---AYSAAVFHLMTHA 353 Query: 349 LAKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 K LLF +G+V++ +D+ + G+ K M T G LAL G P F+ F S+ Sbjct: 354 FFKALLFLAAGSVIIGMHHEQDMRKMGGLRKYMKVTYWTSVIGTLALVGTPFFSGFYSKD 413 Query: 408 MTITAGLARNHLLIIVLL-------LLLLTLVLAGLVRMAARVLMAKPP----------- 449 I A H + L + + R+ K Sbjct: 414 TIIEAAAHHAHESHSWIATYGYWAVLGGVLVTSFYSFRLLFLTFHGKERFRDAHAHDVHA 473 Query: 450 ------------------------------------------QAVNRGDLGWLTTSPMVI 467 + + W+ T P+++ Sbjct: 474 HHDSAHTDAEAQVHTHDSHGHDAHDAHGHDDHGHGHGHHGAHEPHEPHESKWVVTLPLIL 533 Query: 468 LLVMMLAMGTHIPQPVI 484 L + +A+G P++ Sbjct: 534 LAIPSVAIGFFTIGPML 550 >UniRef50_C1ZFV1 NADH dehydrogenase subunit L n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZFV1_PLALI Length = 696 Score = 348 bits (893), Expect = 4e-94, Method: Composition-based stats. Identities = 112/437 (25%), Positives = 184/437 (42%), Gaps = 36/437 (8%) Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 + L D + L L ++ + L I++ YM + + ++G LF+ Sbjct: 122 LTVDIVLRADAMTALMLVMVNFVSLLVAIFASSYMHGDKGY--------PRFFGAMALFV 173 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAA-WKYIIICTVGVAFGLFG 182 F+M ++V + N I ++ EA L S L+G + + S AA K ++ +G + Sbjct: 174 FSMNMLVLAGNFIEVFIFWEAVGLCSYLLIGHWYHKPSAAAAARKAFVVNRIGDFGLMTA 233 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 L+Y SV + + L + P L+ + LL+G K+ FP+H WL Sbjct: 234 IFLIYRTFGSVDFETVLDPARLAELAAAQ---PGLVTTIALLLLLGAIGKSAQFPLHVWL 290 Query: 243 PDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 PDA E P+PVSAL+ A ++ + ++ R I S ++ G ++ VAA Sbjct: 291 PDAM-EGPTPVSALIHAATMVTAGVYLIARTTPIFVH---SPTAQLVVAGVGAITALVAA 346 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFA------ALLHILNHSLAKTLLF 355 L Q D+KR+LAYS+V +G + + LG A A+ H+L H+ K +LF Sbjct: 347 ITALCQYDLKRVLAYSTVSQLGYMFMALGAAAASPALAAHAETFAMFHLLTHAFFKAVLF 406 Query: 356 CGSGNVLLKYGTR-DLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 +G+V+ G D+ G+ K +P T + F GALALAG P + F S+ + Sbjct: 407 LAAGSVMHAMGDVIDMRRFSGLRKALPITHITFLCGALALAGFPLLSGFWSKDEILAVVW 466 Query: 415 ARNH--------LLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLGWLTT 462 LI+ + LL L R + D Sbjct: 467 EATQTGDYKTYFYLILGVGLLTSLLTAFYTFRAYYLTFHGPERFPEEAGHHPHDASPAMA 526 Query: 463 SPMVILLVMMLAMGTHI 479 P+ IL + + G + Sbjct: 527 IPLYILAALAVVAGLIL 543 >UniRef50_Q0C1D3 NADH-quinone oxidoreductase, L subunit n=4 Tax=cellular organisms RepID=Q0C1D3_HYPNA Length = 716 Score = 347 bits (891), Expect = 6e-94, Method: Composition-based stats. Identities = 101/480 (21%), Positives = 182/480 (37%), Gaps = 68/480 (14%) Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 F A + +D L + +A++ + L +YS GYM E ++ + LF Sbjct: 101 FKANWAIRVDALSIVMMAVITGVSGLVHLYSWGYMSEEPHK--------SRFFAYLSLFT 152 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVAFGLFG 182 F ML++V ++N I ++ E L+S L+G + + + +A+ K + VG G Sbjct: 153 FMMLMLVVADNFIQLFFGWEGVGLASYLLIGFWYTKKAPNDASIKAFVTNRVGDFGLALG 212 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPT----------------LMLLAFVFLL 226 + V+ SV + + + + L + L Sbjct: 213 IMAVFFVFGSVEFGPVLDAIRTNAIVTPVAFAEAAPAREAVIMFLGQRVYALELIGILLF 272 Query: 227 IGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFP 285 IG K+ F +H WLPDA E P+PVSAL+ A ++ + ++ I + Sbjct: 273 IGAMGKSAQFFLHVWLPDAM-EGPTPVSALIHAATMVTAGVYLVCLVSPIYEYTF---YA 328 Query: 286 NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 ++ + G ++ AA + Q DIKR++AYS+ +G + G+G AA+ H+ Sbjct: 329 AGMIALVGAVTALYAATVGMAQNDIKRVIAYSTCSQLGYMFFAAGVG---AYEAAMFHLF 385 Query: 346 NHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALA--GMP---- 398 H+ K LLF G+G+V+ +D+ + G+ K MP T G +A+ G+P Sbjct: 386 THAFFKALLFLGAGSVIHGMHHEQDMRRMGGLAKFMPLTYAAMMIGTIAIIGLGIPHTKL 445 Query: 399 PFNIFLSEFMTITAGLARNHL------LIIVLLLLLLTLVLAGLVRMAARVLMAKP---- 448 F+ F S+ + + A + LL L R+ Sbjct: 446 GFSGFFSKDAILESAFAGGTAQVMFGQMAFWFGLLAAFLTSFYSWRLIYMTFHGPRVVLE 505 Query: 449 ------------------PQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGA 490 + + P+ +L + + G + + A Sbjct: 506 DHGHDHAHADEHAEDDHHGHDHTPHESPMVMLIPLALLSLGAVFAGFYFYDAFVEANNEA 565 >UniRef50_A8ERK5 NADH-quinone oxidoreductase, L subunit n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ERK5_ARCB4 Length = 628 Score = 347 bits (891), Expect = 7e-94, Method: Composition-based stats. Identities = 112/498 (22%), Positives = 222/498 (44%), Gaps = 42/498 (8%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACR----KRRLSATRTVTVLHSLGITLLLILALWVVQT 56 M+ S + ++L PL ++L + K+ + ++ ++ + ++ L + Sbjct: 1 MNTSALVW-IILAPLFGAILNGSLYFYHIKKSKISENYFALIGTITPLISFLITLSLFLR 59 Query: 57 AADAGEIF-------------AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVA 103 + IF + D L + +G+L IY+IGYM+ + Sbjct: 60 MLEEKIIFKQHIFTWLNVDKLNIEMAFLGDNLSIFMSMFVTFVGWLIHIYAIGYMKGDDG 119 Query: 104 HGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSL 162 G+ ++ +F+LFL +ML++V ++N I+++ E + S L+ Y G + ++ Sbjct: 120 FGK--------FFAYFNLFLASMLILVLADNPIILFIGWEGVGVCSYLLIKFYYGSKDNV 171 Query: 163 EAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAF 222 AA K I+ VG L G V ++ V + + +L++L+ Sbjct: 172 IAANKAFIVNRVGDFGFLLGVVTLFFALGQVDLS------FGTIEANIGNTTNSLLILSG 225 Query: 223 VFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIG 281 L +G K+ P++ WLPDA + P+P+SAL+ A ++ + ++ R++ + G Sbjct: 226 FLLFVGAMGKSAQVPLYVWLPDAMA-GPTPISALIHAATMVTAGVYMVARFHFLY---AG 281 Query: 282 SDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAAL 341 + + G +S +AA Q DIK++LAYS++ +G + + +G+G L Sbjct: 282 IEEIGIFIAYIGAISALLAAVIATKQTDIKKILAYSTMSQLGYMFIAVGLGF---YSTGL 338 Query: 342 LHILNHSLAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF 400 H+ H+ K +LF G+G +++ + +++ + +P + F G +A++G+PPF Sbjct: 339 FHVFTHAFFKAMLFMGAGGIIIALHHEQNIFKIAKHRANLPIIGLTFLIGVIAISGIPPF 398 Query: 401 NIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWL 460 + F S+ + A LI + L L + RM V +A V+ Sbjct: 399 SGFFSKDAILAAAFQEGQYLIYGIALFTAFLTAYYMFRMYFIVFVAPNHHDVDYVYTSKT 458 Query: 461 TTSPMVILLVMMLAMGTH 478 T P++IL + + G Sbjct: 459 ITLPLLILAIGAVGAGFL 476 >UniRef50_Q2RXM0 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM0_RHORT Length = 531 Score = 347 bits (890), Expect = 7e-94, Method: Composition-based stats. Identities = 158/458 (34%), Positives = 252/458 (55%), Gaps = 7/458 (1%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M+ S + LL L P L +++ + + R + +V +LG + + + + A++ Sbjct: 1 MANSSLLLLLFLIPALGAVVEYPLGRARSALAGAPSVAGALGAFAVAVTMAFRI---AES 57 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 G++FA G W H D L + ++ +G ++SIGY+RHEV G+ S L Y+ Sbjct: 58 GDLFALGGWFHADALSAVVAIVVTFVGLAATLFSIGYLRHEVEAGQYSQTRLPVYFVLNS 117 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 +F+ TM V +NN+I+M+ +EATTL+SA LV Y + + EA +KY+++C+VG+ GL Sbjct: 118 VFIATMAAVTVTNNVIMMYVVVEATTLASALLVTYYRKPGAWEAGYKYLLLCSVGITMGL 177 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 G V++Y+ A + A+ SE+ + L PT +++ V ++IGFG+K GL P HA Sbjct: 178 LGCVILYSAAVPL-LGGHRAMQISELATVADQLPPTAVVVGCVLIIIGFGSKAGLIPFHA 236 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 WLPDAHS++PSPVSALLS V L A+ + R + G+ ++ G +++ Sbjct: 237 WLPDAHSQSPSPVSALLSGVTLKVAIYAIARIASLFYAGHGA--LGVFCIVLGAITMLGG 294 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 Q D+KRLLAYSSV +G + + LGIG LG + A+ H++NH+L K +LF +G Sbjct: 295 IIAAFSQTDLKRLLAYSSVSQVGYIIMGLGIGSYLGFYGAVYHLMNHALDKAMLFLCTGL 354 Query: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 +L GT + + G K P A+ F GALA++G+PP N F S+F TA + Sbjct: 355 LLYSCGTTSIEEL-GKRKHSPLVALCFFIGALAISGVPPLNGFWSKFAIYTAAAEAHLWW 413 Query: 421 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLG 458 + + LL + +A LVR + + D+ Sbjct: 414 ALGVALLTSLITIAVLVRAGYLIFLRNTDHDHGSTDVS 451 >UniRef50_C1XJC0 NADH dehydrogenase subunit L n=2 Tax=Meiothermus RepID=C1XJC0_MEIRU Length = 610 Score = 347 bits (890), Expect = 8e-94, Method: Composition-based stats. Identities = 108/452 (23%), Positives = 207/452 (45%), Gaps = 25/452 (5%) Query: 29 LSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGF 88 +A ++L L L+L L A + L++D L G+ L ++ +GF Sbjct: 31 PAAGWLASLLVLGSFLLGLVLLLQGGGRWALPDWLPGIPFSLNLDNLSGVMLMVVTGVGF 90 Query: 89 LTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLS 148 L +++IGYM + + ++ +F+LF+ ML+++ ++L V++ E L+ Sbjct: 91 LIHVWAIGYMHGDPGY--------SRFFSYFNLFIAAMLVLILGDSLPVVFIGWEGVGLA 142 Query: 149 SAFLVGIYGQRS-SLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVL 207 S L+G + ++++A K I+ +G L L+++ ++ Sbjct: 143 SYLLIGFWYHERINVDSARKAFIVNRIGDLGFLLAMGLLWSMFGTLSISELAEKV----- 197 Query: 208 KQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCAL 266 ++ T + LA FLL+G K+ P+ WLPDA + P+PVSAL+ A ++ + Sbjct: 198 -EAGGYSFTTLTLAGFFLLVGAMGKSAQVPLMVWLPDAMA-GPTPVSALIHAATMVTAGV 255 Query: 267 LVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVA 326 +L+R+ ++ + + L++ G+L+ A L Q DIKR++AY+++ +G + Sbjct: 256 YLLVRHAFMLHDDA---YLSGLIVFIGLLTAFYGALCSLGQWDIKRIVAYTTLSQLGFMF 312 Query: 327 VELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAV 385 V +G+G + A+ HI+ H+ K L+F SG+V+ G +D+ + GM K +P T + Sbjct: 313 VAVGVG---AYWVAIFHIVTHAFFKALMFMTSGSVIHALGGEQDVRKMGGMRKYLPATHL 369 Query: 386 LFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLM 445 A G+ P F S+ + L ++ LL L +R V Sbjct: 370 HGLIATFASGGLVPLAGFWSKDAILAYSFEYGPWLWFLM-LLASVLAALYSIRWYVLVFW 428 Query: 446 AKPPQAVNRGDLGWLTTSPMVILLVMMLAMGT 477 + + + + P IL+ + +G Sbjct: 429 GEYRGKEHPHESPAVMLWPNHILMGGAIGVGF 460 >UniRef50_B2A693 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Clostridia RepID=B2A693_NATTJ Length = 499 Score = 347 bits (890), Expect = 9e-94, Method: Composition-based stats. Identities = 122/503 (24%), Positives = 230/503 (45%), Gaps = 22/503 (4%) Query: 5 VMFALLLLTPLLFSLLCF---ACRKRRLSATRTVTVLHSLGITLLLI--LALWVVQTAAD 59 + +++L + S + +K ++ L I + L+ ++ T Sbjct: 6 HLPIIIVLIGIFVSFILPGLHFIKKNLNEYVSLSAMILMLVIAIYLVIEVSSNGPFTYVV 65 Query: 60 AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 G+ ++D LG I+ IGFL +Y+ + HE L L YY + Sbjct: 66 GEWAPPWGIEFNVDYLGVYMTLIITGIGFLALLYASRDLHHE-----LQENALSLYYPLY 120 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFG 179 L + +M+ +V +N++ ++ +E T L+S ++ + + ++EA+ KY+++ +G A Sbjct: 121 MLLMASMIGMVLTNDIFNLFVLLEITLLTSVAIICVKENKDTIEASLKYLMLNALGSATV 180 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L G L+Y + + PT+++ +GFG K+ LFPMH Sbjct: 181 LMGIALLYIITGHLNMTYIAQELAVNFEQY-----PTVIMAIVALFFVGFGVKSALFPMH 235 Query: 240 AWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDF--PNRLLLIFGMLSV 297 WLPDAH APSP SA+LS +++ ++ LIR+Y I+ + +LL F + Sbjct: 236 VWLPDAHGSAPSPSSAVLSGLVIKVYVVSLIRFYFIVLPEEILELMPVGEILLWFAAAGM 295 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 + + F + Q DIK++LAYSSV + V + +G+ LLHILNH++ K++LF Sbjct: 296 ILGSMFAIAQEDIKKMLAYSSVAQISYVFLGIGLLSLTSFQGGLLHILNHAIIKSMLFLI 355 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 +G ++ G R ++ + G+ P + F GA A+ G+P N F+S++ L Sbjct: 356 AGAIIYTSGIRKISHMHGVGLRYPLIMICFTLGAFAMIGIPGTNGFISKWYLALGALDAG 415 Query: 418 HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA----VNRGDLGWLTTSPMVILLVMML 473 ++++L+ L + + A + L W P+V+ +++ Sbjct: 416 RPFFVLVILVSSLLNGVYYLPIVVNSFFGDMQDADINFIKCNKLPWQMFFPIVLCGFLII 475 Query: 474 AMGTHIPQPVIRILAGASTIVLS 496 +G + P+ ++ A ++ Sbjct: 476 FIGLYPALPL-SLVEPAVEFLMP 497 >UniRef50_C0A9K9 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9K9_9BACT Length = 821 Score = 347 bits (890), Expect = 9e-94, Method: Composition-based stats. Identities = 128/539 (23%), Positives = 225/539 (41%), Gaps = 37/539 (6%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVV----QTAA 58 + + + P ++ + + S T ++ + T++L QT Sbjct: 1 MLPLLIIAIFAPFVWLPVTAFAGRWLGSRTAWFALVAPVVSTVILAALALDARAGAQTVV 60 Query: 59 DAGEIFAAGL--WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 + I + GL +DGL F ++ +G L +Y+ Y+ +Y Sbjct: 61 EIPWIPSLGLNLTFLVDGLSLFFALVVSGMGVLVALYAAAYLDDHYEWH-------GRFY 113 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVG 175 + LF+ ML V + NL++++ E T ++S L+G + + S A +++ + Sbjct: 114 AYLLLFMGAMLGTVLAGNLLLLFVFWELTGIASFLLIGFLHDKEESRSGARMALLVTGLT 173 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGL 235 L G L A + +A + + L+ +AFV L +G K+ Sbjct: 174 GLVMLAGVALTGIAAGTWDLATLLA----KGGEAFGPDSRGLLSVAFVLLAVGAMGKSAQ 229 Query: 236 FPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 FP H WLP+A + AP+PVSA L A ++ + + R + I A D LL+ G Sbjct: 230 FPFHFWLPNAMA-APTPVSAYLHSATMVKLGVFFVARVFPIFSDA---DLWMPLLVTVGF 285 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLG---IFAALLHILNHSLAK 351 ++A+A+ F L+ D+K +LA+S+V +G++ G+G G + LLH+ +H K Sbjct: 286 GTMALASLFALLSHDLKAILAWSTVTTLGMLIGFYGMGSRTGANGVQGDLLHVASHVFFK 345 Query: 352 TLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 LF +G + GTRD+ + G+ + +P+ AV+ A ++AG+P F+S+ + Sbjct: 346 GALFMCAGIIDHATGTRDVRELGGLRRRLPWLAVVVTICAASMAGVPGTLGFVSKEYFLK 405 Query: 412 AGLA------RNHLLIIVLLLLLLTLVL--AGLVRMAARVLMAK--PPQAVNRGDLGWLT 461 A +A I + L L L L A R+ A V P + L Sbjct: 406 AQMAFLAQGGGGGWAIYAVGLAWLALTLKVAFSARLVAHVFWGPLTPGATEHFHAPARLM 465 Query: 462 TSPMVILLVMMLAMGTHIPQPVIRILAGASTIV-LSGTHDLPAQRSTWHDFLPSGTASV 519 P IL V + G + T + + T L A S W + A++ Sbjct: 466 LVPPAILAVACVLFGVWPAWLGAGLDRLGVTGLQAAETLSLHALPSQWAPEVGLSLAAL 524 >UniRef50_C0GRM0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GRM0_9DELT Length = 699 Score = 346 bits (889), Expect = 1e-93, Method: Composition-based stats. Identities = 106/518 (20%), Positives = 216/518 (41%), Gaps = 57/518 (11%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG---- 61 + L L+ P + L+ + S V S + ++ ++ +A Sbjct: 5 LAWLCLIFPFIGVLVTPFLARISTSVMNFGAVFFSFLAAVCALMLFPLLFSAEALPLESQ 64 Query: 62 -----EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 + +D L + ++ VI F +Y +GYM+ + + ++ Sbjct: 65 LVWLHTPITVSFGVLVDPLSIIVANVVAVISFFIMVYCVGYMKGDPG--------IMRFW 116 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE------------- 163 + F+ +MLL+V +NNLI+++ + L S L+G Y + Sbjct: 117 MLMNAFIGSMLLLVLANNLIIIFIGWKLVGLCSYGLIGFYYRDEKKYWIGGPEPYSFDTP 176 Query: 164 --AAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLA 221 K I+ +VG L G +++Y A + + + ++ P +++L Sbjct: 177 SACGVKAFIVTSVGDMLMLGGILIMYFYAGTFNVLELYQTAPEWIPEMAA--TPGMIILV 234 Query: 222 FVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAI 280 + L+ G K+ FP+H WLP+A S P PVSAL+ A ++ + ++ R+ I Sbjct: 235 SILLIAGPVGKSAQFPLHEWLPEAMS-GPGPVSALIHAATMVKSGVFLIARFIPIFYYGY 293 Query: 281 GSD------FPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGG- 333 + + ++ G ++ +AA LV ++K++LAYS+V +G + + LG+ G Sbjct: 294 WTAGVDEAMYFFLIVAWIGAITAFLAASQGLVALELKKILAYSTVSQIGYMMLALGVAGF 353 Query: 334 -----PLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFG 388 G A H+++H++ K LF +G V+ + +N + + K +P+T + G Sbjct: 354 SQDLLVKGYAAGTFHLMSHAMFKACLFLCAGTVIHAAHSIYINDMGALRKFLPYTWLFMG 413 Query: 389 GGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP 448 L+L G+PP F S+ + A L H+++ +++L+ + R + K Sbjct: 414 LATLSLIGVPPLPGFWSKEAVLLATLESQHIVLFLIVLVSVIFTAFYSTRYFGMMFHGKQ 473 Query: 449 PQAV---------NRGDLGWLTTSPMVILLVMMLAMGT 477 + + + + + T +L ++ G Sbjct: 474 SRHIKQELKKPHNHVHEGYFPQTFACGVLAAGIVIFGL 511 >UniRef50_Q7NHD8 NADH dehydrogenase subunit 5 n=1 Tax=Gloeobacter violaceus RepID=Q7NHD8_GLOVI Length = 605 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 135/492 (27%), Positives = 213/492 (43%), Gaps = 32/492 (6%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF 64 + L L LFSL + + + + L L L V A F Sbjct: 9 WLIPLYCLAGALFSLPWALTQSKGQRIAAFGGLFFTGLALLHASLMLPEVLAGAGGTFRF 68 Query: 65 AA--------GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 + I+ L L ++ + L +YS+GYM HE L YY Sbjct: 69 PWIDFGTLNIEVSGLINPLTAGTLVLVAGVSLLVQLYSLGYMDHEP--------RLARYY 120 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKY-IIICTVG 175 G F ML +V S+NL+ M+ E LSS LVG + + + AA K + VG Sbjct: 121 GLLSFFTMAMLGLVLSDNLLAMYGFWELMGLSSYLLVGFWWSKPAAAAAAKKAFLTTRVG 180 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGL 235 L G +L+Y NA ++ A +++ + L L + L G K+ Sbjct: 181 DFLLLIGILLLYVNAGTLEITALGEW------AETATIAAPLATLIVLLLFAGPVGKSAQ 234 Query: 236 FPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 FP+H WLPDA E P+P SAL+ A ++ + ++ R + S ++ G Sbjct: 235 FPLHVWLPDAM-EGPTPASALIHAATMVAAGVFMVARLEPVF---ALSSTALMVVAYTGA 290 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLL 354 ++ +A Q DIKR+LAYS++ +G + + LG+G AA+ H+ H+ K +L Sbjct: 291 ITALGSALMATAQNDIKRVLAYSTISQLGYMFMALGVGNT---EAAMFHLFTHAFFKAML 347 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 F G+G+V+ T+D+ + G++ MP TA +G G LALAG+ PF F S+ + A Sbjct: 348 FLGAGSVIHGAHTQDMREMGGLMGRMPVTAFTYGIGVLALAGVFPFAGFWSKDAILHALE 407 Query: 415 ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA-VNRGDLGWLTTSPMVILLVMML 473 + + LL L + R V + KP + + W + P+VIL V Sbjct: 408 KAELYPVFAMGLLTAGLTAFYMARQYILVFLGKPSEKSSRAHESTWTMSLPLVILAVPSA 467 Query: 474 AMGTHIPQPVIR 485 A G + ++ Sbjct: 468 AAGWLGNEWFLK 479 >UniRef50_C1A8Y3 NADH-quinone oxidoreductase chain L n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y3_GEMAT Length = 674 Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats. Identities = 110/495 (22%), Positives = 205/495 (41%), Gaps = 61/495 (12%) Query: 31 ATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA----AGLWLHIDGLGGLFLAILGVI 86 ++ + + + + + + + +D L L + ++ + Sbjct: 49 GVIIAAFAVAMALFMRMRVGMAGPAIVSLGQWMPVGNLVIDWNFQLDQLSMLMVLVITGV 108 Query: 87 GFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATT 146 G L ++SIGYM+ + + Y+ + +LF+ ML++V + VM+ E Sbjct: 109 GSLIHLFSIGYMQDDPGY--------ARYFAYLNLFVAFMLVLVLGGSYPVMFVGWEGVG 160 Query: 147 LSSAFLVGIYG-QRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSE 205 L+S L+G + +++ +A K ++ VG L L++ + ++ Sbjct: 161 LASYLLIGFWFSDKANADAGKKAFVVNRVGDFGFLVAMFLIWVTTQHLDFVGAHSVL--- 217 Query: 206 VLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNC 264 + ++L +FL +G K+ P++ WLPDA + P+PVSAL+ A ++ Sbjct: 218 ----GGMGGTPVVLAIALFLFVGCAGKSAQLPLYIWLPDAMA-GPTPVSALIHAATMVTA 272 Query: 265 ALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGL 324 + ++ R I G+ + ++ G L+ AA L Q DIK++LAYS+V +G Sbjct: 273 GVYLVARAAPIF---AGAPEASLVITAIGALTALFAATIALRQWDIKKVLAYSTVSQLGY 329 Query: 325 VAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY-----------GTRDLNVV 373 + V +G G A + H++ H+ K LLF G+G+V+ +DL + Sbjct: 330 MFVAVGSG---AYTAGVFHLVTHAFFKALLFLGAGSVIHAMHHAYHHTHRHDDPQDLRNM 386 Query: 374 CGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH--------------- 418 G+ + MP TA LA+AG+PP F S+ + AR H Sbjct: 387 GGLARFMPATAGAMTLATLAIAGVPPLAGFFSKDEILAGVFARAHDSPLANASLLGIPGS 446 Query: 419 ---LLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLGWLTTSPMVILLVM 471 + +L L + RM + + + + T+P++IL V+ Sbjct: 447 TVLYAAYGIGILTALLTAIYMTRMLLLAFYGENRTGEAERSALHEAPLIMTAPVLILGVL 506 Query: 472 MLAMGTHIPQPVIRI 486 LA G +I I Sbjct: 507 TLAGGWLNLPALIPI 521 >UniRef50_Q9HJK6 NADH dehydrogenase, chain L related protein n=6 Tax=Thermoplasmatales RepID=Q9HJK6_THEAC Length = 635 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 113/512 (22%), Positives = 215/512 (41%), Gaps = 31/512 (6%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQ---TA 57 M+ + ++ ++PL+ LL K + + + ++ + V Sbjct: 1 MTMYIYGWMIFISPLIGFLLTLIIGKYYRRWSGAIASFFIFLAFIFSVITYFTVIKHPIY 60 Query: 58 ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 + ++ID L + ++ + + +++I YM+ + Y+ Sbjct: 61 NSYTWFYNIDFGIYIDNLAIVMAMMVSFVSLMIHLFAIYYMKDDPNKHV--------YFA 112 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYIIICTVGV 176 LF ML +V S+NL++++ E L S L+G + + ++ AA K I+ VG Sbjct: 113 ETALFTAGMLGLVISSNLVLLFLFWELVGLCSYLLIGFWFFKPNATAAAKKAFIVTRVGD 172 Query: 177 AFGLFGTVLVYANAASVMPQAE-MAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGL 235 + G ++Y + +V + S + + + + +F+L K+ Sbjct: 173 LSFIIGMSILYYSLINVTKDPLSIPYLISNASSIAVAIGKVRLGIIAIFILGAAIGKSAQ 232 Query: 236 FPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 FP+H W+PDA E P+ VSAL+ A ++ + ++ R + + A F + I G Sbjct: 233 FPLHVWIPDAM-EGPTTVSALIHAATMVTAGVYLVARLFQVFLYAA--PFAMYAVAIVGS 289 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG---GPLGIFAALLHILNHSLAK 351 + A LV D+KR+LAYS++ +G + +G+ G + + + H+++H++ K Sbjct: 290 FTALYAGIVGLVVNDVKRILAYSTISQLGYMLAAIGLAPIIGGVAVSLGMFHLISHAIFK 349 Query: 352 TLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 LLF +G L+ RD + G+ K MP T LF G+LAL P + + S+ I Sbjct: 350 ALLFMSAGAFLVAMMDLRDAKQMGGLWKRMPVTTTLFFIGSLALVAFPGTSGYFSKDPII 409 Query: 411 TA-------GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ--AVNRGDLGWLT 461 A L+ L ++ L+ L RM V + KP A D + Sbjct: 410 FASYNYFTKSLSVAGFLPLLFLMTGSLLTTLYTFRMFFLVAVGKPRSTLAERARDPPIVA 469 Query: 462 TSPMVILLVMMLAMGTHIPQPVIRILAGASTI 493 P+++L + L +G P + + Sbjct: 470 LLPLMVLSIFALILGVWQ-VPFYSFVKPTLDL 500 >UniRef50_C5NVG1 Na(+)/H(+) antiporter subunit A n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NVG1_9BACL Length = 788 Score = 345 bits (885), Expect = 3e-93, Method: Composition-based stats. Identities = 106/498 (21%), Positives = 212/498 (42%), Gaps = 47/498 (9%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI-- 63 M L + P++ RK + V+ I ++ + Sbjct: 1 MLQLAVFLPVIAMFFVPFFRKNFKTIHTGKFVIVVPLILFGYFISNLKYIYSGGTIYKKL 60 Query: 64 -----FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 + L++DGL LF ++ IG L +YS YM ++ L +Y F Sbjct: 61 AFVSNVGLDINLNLDGLSLLFSLLITGIGTLVILYSCYYMS-------ITDEKLHKFYIF 113 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVA 177 +F+ ML VV S+N++ M+ E T++SS L+ + + + + A K +II G Sbjct: 114 LLIFMSAMLGVVLSDNMLSMYMFWEMTSVSSFLLISYWHENDASRKGALKSLIITVFGGV 173 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L G ++ S + + ++A + ++ G TK+ FP Sbjct: 174 LMLAGIFILNNITGSFNVSEIIEFTKNHGYNDK-------YVVAMILIIFGAFTKSAQFP 226 Query: 238 MHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 H WLPDA + AP+P+S+ L A ++ + +L+R I+ + +L+IFG ++ Sbjct: 227 FHIWLPDAMA-APTPISSYLHSATMVKAGIYLLLRIGIVF---SFTSSFGNILIIFGTIT 282 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGG-----------PLGIFAALLHIL 345 + + + + +D+K +LAYS++ +G++ + +GI +A HI+ Sbjct: 283 MLIGSISAIFLKDLKGILAYSTISQLGMMTLMIGIANLGLYNDNHYVYTFAFYAVCFHII 342 Query: 346 NHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 NH+ K LF +G + + +RD+ + G+ + MP + +L ++AG+PP + F S Sbjct: 343 NHAAFKASLFMITGIIDHSFHSRDIEKLRGIKRYMPLSFILSIIAGFSMAGIPPLSGFYS 402 Query: 406 EFMTITAGLARNH-----LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV----NRGD 456 + +T ++I++ +++ + +A + + K ++ Sbjct: 403 KEYFLTVVYGLTQSSMLYMIIVIAVVIGALGTAIYSLIVAFKPFLGKFDNSILGNKKLHL 462 Query: 457 LGWLTTSPMVILLVMMLA 474 +IL+V ++ Sbjct: 463 PSNGIFISPIILVVFVII 480 >UniRef50_Q67KP4 NADH dehydrogenase I subunit L n=1 Tax=Symbiobacterium thermophilum RepID=Q67KP4_SYMTH Length = 685 Score = 344 bits (884), Expect = 4e-93, Method: Composition-based stats. Identities = 106/518 (20%), Positives = 192/518 (37%), Gaps = 54/518 (10%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL---------------- 51 ++ PL S L + L L + L Sbjct: 9 WVIAALPLAVSALIAMFAGVLRDRAWIPGTVGMLITFLWSVGVLAAVIADPGHGGEVLYN 68 Query: 52 ----WVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGEL 107 W + + + +D L L L ++ ++ YS YM + Sbjct: 69 TVPAWKASFDWASFGPYTVRMGFQVDNLTALMLPMITLVSVCVQYYSSAYMHGDK----- 123 Query: 108 SPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAW 166 + +Y +LF ML++V ++NL ++ A E L S L+G + +++ Sbjct: 124 ---RIPRFYAALNLFTMAMLVLVMADNLFLLLVAWEIMGLCSYLLIGHWYEQAWPRYGQI 180 Query: 167 KYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLL 226 K + VG + G +V+ A + V ++ L Sbjct: 181 KAFLTTRVGDIGMMVGIFIVFFAARDLTWAGLAEKVPVLVQDPATASLLALGAFLLF--- 237 Query: 227 IGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFP 285 G K+ FP+H WLPDA + P+P SA++ A ++ + ++ R ++I + Sbjct: 238 TGAIGKSAQFPLHTWLPDAMA-GPTPGSAIIHAATMVAAGVYLVGRAFMIFGHVPA--WV 294 Query: 286 NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 ++ G + AA ++ DIK +LAYS++ +G + + +G+G G A H+L Sbjct: 295 LVVVTFVGAFTSLFAASIATLRWDIKEVLAYSTISQLGYMIMAMGLG---GWTAGNFHLL 351 Query: 346 NHSLAKTLLFCGSGNVLLKYGT-RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 H+ K LLF +G+V+ + + L+ + G+ K +P T + G ALAG+P F+ F Sbjct: 352 THAFFKALLFLAAGSVIHAHHHNQLLHKMGGLRKKIPITFWTWMVGYAALAGIPGFSGFF 411 Query: 405 SEFMTITAGLARNHLLII-----------VLLLLLLTLVLAGLVRMAARVLMAKPPQ--- 450 S+ + A L ++ L+ + L L + R +P Sbjct: 412 SKDELLLAALEWHNPLVATWPIWLQKLPFAMALTTAFLTAYYMTRATYLAFFGEPRDMHL 471 Query: 451 AVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILA 488 + T P++IL V G Sbjct: 472 YEQAHESPKAMTIPLIILAVPAALYGWLGTPLFNHFTN 509 >UniRef50_A5UV30 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria RepID=A5UV30_ROSS1 Length = 793 Score = 344 bits (884), Expect = 5e-93, Method: Composition-based stats. Identities = 127/524 (24%), Positives = 225/524 (42%), Gaps = 32/524 (6%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA------ADAG 61 +L+ ++ + + L + + I + V Sbjct: 2 LTAVLSGFGGAIAAPWLHRFAPRHAGWLAALLPFALMIYFISLVPAVAGGDALRFSYAWV 61 Query: 62 EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 L IDGL LF ++ IG L IY+ GY+ ++ L + Sbjct: 62 PGLGVNLSFRIDGLSLLFALLITGIGTLVLIYAGGYLANDP--------MLGRMLTLLLI 113 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGL 180 F+ ML +VTS+NLI ++ E TT+SS L+G + + +AA + +++ +G L Sbjct: 114 FMAAMLGIVTSDNLIALFVFWELTTISSYMLIGYKHEYEKARKAALQSLLVTGIGGLALL 173 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 G VL+ A ++ + + + L +L G TK+ FP H Sbjct: 174 AGIVLLGQIAGTLELSEMLK-------QGDVVRAHPLYGGILALVLFGAFTKSAQFPFHF 226 Query: 241 WLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLP A EAP+PVS+ L A ++ + +L R ++ G++ LL FG ++ V Sbjct: 227 WLPGAM-EAPTPVSSYLHSATMVKAGVFLLARLNPVLG---GTEAWQLLLTFFGGATMIV 282 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 +F + Q D+KR+LAY++V +G + + +G+G I AA++ L H+L K LF +G Sbjct: 283 GSFLAVQQTDLKRILAYTTVSALGTLVLLIGVGTDDAIKAAMVFTLGHALYKGALFQVAG 342 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 +V + G RD++ + G+ MP TA AL++AG+PP F+++ + A L+ Sbjct: 343 SVDHETGARDISQLGGLRTAMPITAAAAMLAALSMAGLPPMLGFIAKEVQYKANLSE--P 400 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV-NRGDLGWLTTSPMVILLVMMLAMGTH 478 ++I + LL L + ++ RV +P + + V L + L G Sbjct: 401 ILIGVALLTNILTVVAAGFVSLRVFTGQPVHTPKHAHEAPLSMWLGPVALALGGLGAGLF 460 Query: 479 IPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEK 522 Q ++ A+ VL + W + +++ Sbjct: 461 STQIGNFLIGPATGSVLGKVKAVE--LVLWAGIEGAAGQALALS 502 >UniRef50_D1Y0I6 Putative NADH dehydrogenase subunit L n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1Y0I6_9BACT Length = 686 Score = 343 bits (881), Expect = 9e-93, Method: Composition-based stats. Identities = 118/539 (21%), Positives = 205/539 (38%), Gaps = 70/539 (12%) Query: 9 LLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA-------- 60 L+LL P L L + + LG+ L L Sbjct: 7 LILLLPFLSFLTLGLLGMKMPKKVAGIAGTCMLGVLFALSLYTAYHYFFYTGEYTAMGET 66 Query: 61 ----------------------------GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGI 92 E+ + + + + L ++ + F+ I Sbjct: 67 FKVVNGRLDGGHGAYPTVTVFNFTWLKFTELLTFNIGFRLSPISVMMLVVITTVSFMVHI 126 Query: 93 YSIGYM--RHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSA 150 YS GYM R E E +Y + +F +ML +V + N+ M+ E + S Sbjct: 127 YSFGYMAERGEHYEFEEYEHGFQRFYAYLSMFTCSMLGLVVATNIFQMYLFWELVGVCSY 186 Query: 151 FLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQ 209 L+G Y + +++ A+ K I+ F L G + + + + L + Sbjct: 187 LLIGFYYPKHTAVHASKKAFIVTRFADLFFLIGILFFSFYVGTFNYDLNVNPELTVTLAK 246 Query: 210 SSLLDPTLMLL--AFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCAL 266 + T + A + IG K+ +FP+H WLPDA E P+PVSAL+ A ++ + Sbjct: 247 LATDPTTAWAIPTALFLMFIGGAGKSAMFPLHIWLPDAM-EGPTPVSALIHAATMVVAGV 305 Query: 267 LVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVA 326 + I Q G+ + + AA Q+DIKR LA+S++ + + Sbjct: 306 FQVASLLPIYLQ-FGAQEQLHWIAWIAAFTAFYAAAVACAQKDIKRGLAFSTISQIAYML 364 Query: 327 VELGI-----------------GGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRD 369 V LG+ G LG AA+ H+ H++ K LLF SG +++ G+ Sbjct: 365 VALGVCFYDAKEGAFGSHGFLHHGGLGYMAAMFHLFTHAMFKALLFLCSGAIIVIIGSNF 424 Query: 370 LNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLA---RNHLLIIVLLL 426 + G+ K MP T + F G LA+AG+PPF F S+ I+A A + ++ Sbjct: 425 KEYMGGLHKYMPITNICFLIGCLAIAGIPPFAGFFSKDEIISACNALPGAEGQALKWIMT 484 Query: 427 LLLTLVLAGLVRMAARVLMAK------PPQAVNRGDLGWLTTSPMVILLVMMLAMGTHI 479 L+ + + R+ + + P ++ ++ P+V L ++ G Sbjct: 485 LVAGMTAFYMFRLYYVIFWGQSYYELDPEHRRRPQEVPFVMWGPLVFLAIISCVAGLIP 543 >UniRef50_Q0W2B8 Hydrogenase, membrane subunit 1-like protein (EchA-like) n=2 Tax=cellular organisms RepID=Q0W2B8_UNCMA Length = 487 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 216/494 (43%), Positives = 327/494 (66%), Gaps = 9/494 (1%) Query: 5 VMFALLLLTPLLFSLLCFACRKRR-LSATRTVTVLHSLGITLLLILALWVVQTAADAGEI 63 ++ LL+ PL+ + LC+ + +R + T+ L + + L ++ + Sbjct: 1 MIIETLLIIPLITAALCYLIKHKRTVEIVSTLGALAIMAGCVYLAYTVFTRGPVSGGLW- 59 Query: 64 FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 ++D LG L I+ IG IYSIGY+ +E ++ L Y+ FFH+F+ Sbjct: 60 -------YVDSLGAYMLVIISFIGLAAAIYSIGYLGYEYKEKKIDLGRLRYYFTFFHVFI 112 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGT 183 FTMLLV TS+NL +MW AIEATTL+SAFLVG Y + +S+EAAWKYIIIC+VG+ L GT Sbjct: 113 FTMLLVCTSSNLGIMWIAIEATTLASAFLVGFYNKDTSVEAAWKYIIICSVGITLALLGT 172 Query: 184 VLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLP 243 +L+YA++ + + ++ A+ W + +++ LDPTL+ +AF+ ++IG+GTK G PMH WLP Sbjct: 173 ILLYASSVNTLGESADALNWPMLAEKAKSLDPTLLKIAFILVIIGYGTKAGFAPMHTWLP 232 Query: 244 DAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFF 303 DAHSEAP+P+S LLS VLLNCA+ ++RY+II A+G DF LL++FG+LS+A AA F Sbjct: 233 DAHSEAPTPISGLLSGVLLNCAMYGILRYHIITTNALGPDFSGTLLIVFGLLSLAAAAAF 292 Query: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLL 363 I++Q+D KRLLAYSS+E+MG++A+ GIGG +GIF ALLHILNH++ K+L+F G+GN+LL Sbjct: 293 IIIQKDYKRLLAYSSIEHMGIIAIGFGIGGAVGIFGALLHILNHAVTKSLMFFGAGNILL 352 Query: 364 KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIV 423 K+ T++++ V G+ +MP+TA+ F GALA+ G PPF+IF+SE + + AG + ++++ V Sbjct: 353 KFKTKNIDEVKGIAALMPWTAMCFVAGALAITGSPPFSIFVSEIIILIAGFTQGNIVVSV 412 Query: 424 LLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPV 483 L LLLL ++ AG + R++ +P +G+ +L M +LL+ L MG ++P + Sbjct: 413 LYLLLLVIIFAGFMYHVGRMVFGEPAPGTIKGEPNYLGLCVMAVLLLATLIMGVYVPLAL 472 Query: 484 IRILAGASTIVLSG 497 IL TI Sbjct: 473 SDILTQIVTIFGGS 486 >UniRef50_Q9I0J1 NADH-quinone oxidoreductase subunit L n=113 Tax=Gammaproteobacteria RepID=NUOL_PSEAE Length = 615 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 123/522 (23%), Positives = 224/522 (42%), Gaps = 39/522 (7%) Query: 16 LFSLLCFACRKRRLSATRTVTVLHSLGITLLLIL--------------ALWVVQTAADAG 61 + LL R R + + S+G++ L A +V A Sbjct: 13 VGFLLLSFSRGRWSENLSALVGVGSVGLSALSAAWAIFSFHSSPPEGGAYSLVLWQWMAA 72 Query: 62 EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 F+ L++DGL L ++ +GFL +++ YMR E + ++ + +L Sbjct: 73 GDFSTNFTLYLDGLSVTMLGVVTGVGFLIHLFASWYMRGETGY--------SRFFAYTNL 124 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAWKYIIICTVGVAFGL 180 F+ +ML +V +NL+ ++ E L S L+G Y R++ AA K I+ VG F Sbjct: 125 FIASMLFLVLGDNLLFLYFGWEGVGLCSYLLIGFYYSNRNNGNAALKAFIVTRVGDVFMA 184 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 FG +++ ++ Q + + + + + L + L + K+ P+ Sbjct: 185 FGLFILFQQFGTLNIQELLVLAPQKFPEGNLWLTLATLALLGGAV-----GKSAQLPLQT 239 Query: 241 WLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WL DA + P+PVSAL+ A ++ + ++ R + + A L+ I G +++ + Sbjct: 240 WLADAMA-GPTPVSALIHAATMVTAGVYLIARCHGLFTLAPD---ILELVGIVGAVTLVL 295 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 A F LVQ DIKR+LAYS++ +G + + LG+G AA+ H++ H+ K LLF SG Sbjct: 296 AGFAALVQTDIKRILAYSTMSQIGYMFLALGVG---AWDAAIFHLMTHAFFKALLFLASG 352 Query: 360 NVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPF-NIFLSEFMTITAGLARN 417 V++ + +++ + G+ K +P F G ALA +P F S+ + A Sbjct: 353 AVIVACHHEQNIFKMGGLWKKLPLAYASFVVGGAALAALPFLTAGFYSKDEILWEAFASG 412 Query: 418 HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGT 477 H +++ L+ L R+ +P + G G P+ +L+V+ +G Sbjct: 413 HRELLIAGLVGAFLTSIYTFRLIFVAFHGEPKTEAHAGH-GISHWLPLSVLIVLSTFVGA 471 Query: 478 HIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASV 519 I P+ +L + S A++ Sbjct: 472 LITPPLAGVLPESVGHAGGEAKHSLELASGAIAIAGILLAAL 513 >UniRef50_B0SFU4 NADH dehydrogenase (Ubiquinone), M chain n=6 Tax=Leptospira RepID=B0SFU4_LEPBA Length = 579 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 110/508 (21%), Positives = 209/508 (41%), Gaps = 36/508 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 + ++++ P++ + L ++R+ A ++ L S T+L + + + + Sbjct: 5 ILSIIIFLPIVSTFLIVI--QKRVGAVVVISALSSAFTTILSLGLFFFYDASKAGLQFVH 62 Query: 66 A------------GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 + +DG+ L A+ + FL+ I S P + Sbjct: 63 WIPDWILSGKLSVDYHVGLDGVSLLLFALTTFMFFLSSIASWS----------NIPKKIK 112 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICT 173 +++ + +L V S NL++ + E L ++GI+G +AA KY + Sbjct: 113 EFHICLLVLETAVLGVFASGNLVLFYVFWELMVLPMVLMIGIWGGEERTKAALKYFLFSM 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 G F L G + +Y ++ +L L F + F K Sbjct: 173 AGSLFMLGGILTLYFKTGKTSIESLST-------ASLALYSEPLQWFLFFSFFLAFAIKI 225 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFG 293 LFP H W+PD H++AP+ S L+ VLL IR+ I S + I Sbjct: 226 PLFPFHTWMPDVHTQAPTVGSVDLAGVLLKIGAYGFIRFCIPFFPEQ-SLLSQNGIQILA 284 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 ++ + + LVQ DIKR++AYSS+ ++G + + G+ +L +++H ++ + Sbjct: 285 VIGIVYGSMAALVQTDIKRIIAYSSLSHLGFCILGIFSFTTEGVVGGMLQMVSHGISTGM 344 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 +F G + + TR+++ G+ MP + F L+ G+P N F+ EF+ + Sbjct: 345 IFLMIGMIYERAHTRNISEFGGLAGQMPVFSTFFLIAVLSSIGLPGTNGFVGEFLILIGA 404 Query: 414 LARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP--QAVNRGDLGWLTTSPMVILLVM 471 + N L + + L L+ R L QA DL + + L+V+ Sbjct: 405 IKSNVWL-GGIAATGVVLGALYLLWFVKRFLFGVSKTIQAKPYKDLSFREIGILSPLVVL 463 Query: 472 MLAMGTHIPQPVIRILAGASTIVLSGTH 499 + +G + P+P + IL +S + L+ Sbjct: 464 IFWIGLY-PKPFLSILNSSSNVFLNSAS 490 >UniRef50_B3QY39 Proton-translocating NADH-quinone oxidoreductase, chain M n=14 Tax=Bacteroidetes/Chlorobi group RepID=B3QY39_CHLT3 Length = 545 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 103/547 (18%), Positives = 205/547 (37%), Gaps = 69/547 (12%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI-- 63 M +L++ P++ ++ A + R V++ ++ +L ++ Sbjct: 1 MLSLIVFLPIIAFVIVLAIPGSQKQIIRFVSLAAAIAQGVLSVILWQGYDKTMPGIVAGS 60 Query: 64 --------------------------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGY 97 +L +DGL + + +I + + S Sbjct: 61 NGNVSETFQFVERLDWITLNFGRFGTLNIEYFLGVDGLSITMVLLTALISIIGVVSSW-- 118 Query: 98 MRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG 157 + Y+ ++L M+ + + + + E L FL+GI+G Sbjct: 119 ---------TIQKQVKGYFLLYNLLSMAMMGCFVALDFFLFYVFWEIMLLPMYFLIGIWG 169 Query: 158 QRSSLEAAWKYIIICTVGVAFGLFGTVLVYANA-------ASVMPQAEMAIFWSEVLKQS 210 + AA K+ + G F L + +Y + + A + Sbjct: 170 GPNREYAAIKFFLYTLFGSVFMLLVLIGLYFSVIDPATGNHTFSMVAMVDQANYIPGSIF 229 Query: 211 SLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLI 270 AF+ L +GF K +FP H WLPDAH EAP+P+S +L+ VLL ++ Sbjct: 230 GPESTFWRYAAFIALFVGFAIKVPMFPFHTWLPDAHVEAPTPISVILAGVLLKLGTYGML 289 Query: 271 RYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELG 330 R + +D ++ +FG +++ A L Q D+K+++AYSS+ +MG V + + Sbjct: 290 RINFPFFPEVFTDLA-YVIGVFGAINIIYGALCALAQLDLKKMVAYSSISHMGYVLLGMA 348 Query: 331 IGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGG 390 G+ AL + NH +LF G + + +R + G+ MP + + Sbjct: 349 AINTEGMSGALFQMFNHGTITAMLFLLVGVIYDRAHSRQIEKFGGLSSYMPVYSGILTMA 408 Query: 391 ALALAGMPPFNIFLSEFMTITAGLARN-HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP 449 A G+P + F+SE + I ++ +L + A L+ R+ + K Sbjct: 409 FFASLGLPGLSGFISEAFIFVGSFSSEVTRPIAMVSVLGIVFGAAYLLWSLQRMFLGKRR 468 Query: 450 QAV--------------------NRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAG 489 + D+ S ++ L +++L +G + P PV+ ++ Sbjct: 469 PDALYELHEDENGHQEIHFHDWTGKNDVDARELSMLIPLGIIVLFLGIY-PMPVLGLMTE 527 Query: 490 ASTIVLS 496 + ++ Sbjct: 528 SINKLVD 534 >UniRef50_C5CEV1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEV1_KOSOT Length = 492 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 139/510 (27%), Positives = 238/510 (46%), Gaps = 30/510 (5%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQT------AA 58 ++ L++ PL L ++ + + + + + +L ++++ Sbjct: 1 MIIPYLVIIPLAAGFLIVLLGRKNKVLPELIALTATFSLLAISLLLFPMIESEGGAILYE 60 Query: 59 DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 +G + ID L + ++ + L+ IYS+GYMR + +YY Sbjct: 61 LSGWKIPYTISFVIDYLSAFLVTMVSALAVLSTIYSVGYMRKFSG--------IWNYYAL 112 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAF 178 L + + V + +L ++ +E +++ LV +G+ EAA+KY I+ ++ + Sbjct: 113 LMLMITGLNGVAITGDLFNLFVFMEIALIATYALVAFHGEAEHYEAAFKYAIMSSLSSSL 172 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 LFG VY+ +S+ + ++ L + L GFG K +FP Sbjct: 173 VLFGIGCVYSMTSSLTLMQI----------SNKMIGVGETNLVYALFLTGFGLKAAMFPF 222 Query: 239 HAWLPDAHSEAPSPVSALLSAVLLNC-ALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSV 297 H+WLPDAH APSPVSA+LS VL+ LIR + ++ S+ L LIFG LS+ Sbjct: 223 HSWLPDAHPSAPSPVSAMLSGVLIKVLGAYTLIRVFYMVFGV--SELVKELFLIFGTLSM 280 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 + A ++Q+DIKR+L +SSV MG + LGIG PLG+ A+ H+LNH++ K LLF Sbjct: 281 VIGALVAVMQKDIKRMLGFSSVSQMGYIIFALGIGTPLGVLGAIYHMLNHAVLKGLLFMD 340 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 +G V L GTRD+ + G+ T V +L ++G+PPF F S+ + ITA + Sbjct: 341 AGAVELIEGTRDMEEMKGVSDR--TTYVTSLMASLGISGVPPFGGFFSKLIIITAAIYTG 398 Query: 418 HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGT 477 + ++ L + + L + M + + + ++G L PM+IL V+ LA Sbjct: 399 KFIYAIIALAVSVITLGYYLGMLKKAFRKRNKEVNDKGSLPASLKIPMIILAVLTLATAL 458 Query: 478 HI-PQPVIRILAGASTIVLSGTHDLPAQRS 506 P IL + + T + + Sbjct: 459 FYVPVVRENILEKVVSCITDRTAYIALFTA 488 >UniRef50_B2SEW0 NADH dehydrogenase I, L subunit n=25 Tax=Proteobacteria RepID=B2SEW0_FRATM Length = 669 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 118/501 (23%), Positives = 214/501 (42%), Gaps = 40/501 (7%) Query: 4 SVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWV---------- 53 +V+ A+++L PLL +L+ K +A + G++ +L + L Sbjct: 9 AVLIAVIVLAPLLGALIAGFGGKSVKNAGVNFFTISLCGLSFVLSVILAYGVFSGAEVYS 68 Query: 54 --VQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 A +FA + ++ + + I+ + L IYSIGYM+ E + Sbjct: 69 VSFYQWAPISNMFAFDVGFTVNKITVYMMLIVTFVSTLVHIYSIGYMKGEEGY------- 121 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYII 170 ++ + F F ML +V NN ++++ E L S L+G Y R A+ + I Sbjct: 122 -ARFFAYISGFTFAMLCLVMGNNFLLLFFGWEGVGLFSYLLIGFYFNRDKANVASLRAFI 180 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWS---EVLKQSSLLDPTLMLLAFVFLLI 227 + +G L G V SV A + + + L L I Sbjct: 181 VNRIGDLGFLLGIGAVILYTKSVDYTTVFAALPDIDNTQTIHFLGISFSPVTLMCSLLFI 240 Query: 228 GFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPN 286 G K+ FP+H+WL + E P+P+SAL+ A ++ + ++ R + + S Sbjct: 241 GAMGKSAQFPLHSWLEGSM-EGPTPISALIHAATMVTAGVFMVARLSPMF---VLSPAAL 296 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 +LI G ++ +VQ DIKR++AY ++ +G + V G G + H++ Sbjct: 297 SFVLIIGAITCLFMGLIAIVQTDIKRVIAYCTLSQLGYMMVAQGAG---AFSIGMFHLMT 353 Query: 347 HSLAKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 H++ K LLF +G+V++ +D+ + G+ K MP T + GA ALA +PPF+ F S Sbjct: 354 HAMFKALLFLAAGSVIVAMHHEQDIRRMGGLRKYMPVTYLCMLIGAWALAALPPFSGFFS 413 Query: 406 EFMTITAGLAR---NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLG 458 + + I A A H ++L + + RM V K + + + Sbjct: 414 KDLIIEAAQATTVYGHEFAYYMVLACAFVTSFYIFRMFFLVFHGKERMSDEERSHLKESP 473 Query: 459 WLTTSPMVILLVMMLAMGTHI 479 + P+++L + + +G + Sbjct: 474 FSILIPLILLAIPSVFVGEYF 494 >UniRef50_B1ZRS2 Proton-translocating NADH-quinone oxidoreductase, chain L n=3 Tax=Verrucomicrobia RepID=B1ZRS2_OPITP Length = 622 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 128/502 (25%), Positives = 214/502 (42%), Gaps = 55/502 (10%) Query: 19 LLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI----FAAGLWLHIDG 74 ++ R+ A + + T LILA + A A + F+ L D Sbjct: 20 VIALFLRRAGEIAAVVSVLAAAGIATGALILAFGNHRFEATAEWLRLGDFSFPLGFKFDD 79 Query: 75 LGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNN 134 L L L ++GV+GF ++S GYMR + A Y+G +F+F+M+ + ++N Sbjct: 80 LAALMLFVVGVVGFFIHVFSFGYMREDTAK--------ARYFGGLSIFMFSMIGITVADN 131 Query: 135 LIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKY-IIICTVGVAFGLFGTVLVYANAASV 193 L +M+ E SS L+G + +R S AA K I+ VG L G + Y +V Sbjct: 132 LFMMFVFWELVGFSSWLLIGHWHERPSASAAAKKAFIVNRVGDFGFLLGIAMCYWVHGTV 191 Query: 194 MPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPV 253 + + L + L G K+ P+ WLPDA E P+PV Sbjct: 192 TLSELDGVQ-------------PVGALLPLLLFCGAVGKSAQMPLQVWLPDAM-EGPTPV 237 Query: 254 SALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKR 312 SAL+ A ++ + +L R +++ +++ G + AA +VQ DIK+ Sbjct: 238 SALIHAATMVAAGIYMLCRINVLMVPE-----ALTVIMWVGTATALYAALCAIVQSDIKK 292 Query: 313 LLAYSSVENMGLVAVELGIGG----------------PLGIFAALLHILNHSLAKTLLFC 356 +LAYS++ +G + G+G G+ AA+ H++ H+ K LLF Sbjct: 293 VLAYSTLSQLGYMVAAFGLGSLAERHEMGGAVHEIVIAAGVGAAMFHLVTHAFFKALLFL 352 Query: 357 GSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLA 415 GSG+V+ + +D+ + G++K MP T F G LA+ GMP F S+ + Sbjct: 353 GSGSVIHGCHHEQDIFKMGGLVKRMPVTFATFTIGVLAIIGMPGLAGFFSKDAILLLAYQ 412 Query: 416 RNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP--QAVNRGDLGWLTTSPMVILLVMML 473 +N + V+L L +VR+ P A + + G + T P+++L + + Sbjct: 413 KNA-AVFVVLAFTAILTACYMVRVWKITFFGAPRSEHAEHAHESGSVLTMPLIVLAALAI 471 Query: 474 AMGT--HIPQPVIRILAGASTI 493 G P +L Sbjct: 472 LGGYIGLYPDVFTGVLDLVPEA 493 >UniRef50_D2QRI2 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QRI2_9SPHI Length = 635 Score = 342 bits (877), Expect = 3e-92, Method: Composition-based stats. Identities = 119/488 (24%), Positives = 204/488 (41%), Gaps = 44/488 (9%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI- 63 ++ A +LL P L+ +R + L +++LL + L Sbjct: 11 LLMASILLLPFAGFLVLTMASRRVAQLIAVLLTGAGLLLSVLLAVNLPEQGITLQTNWAI 70 Query: 64 ---FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 + + +D L L L ++ + L +YSI Y+ E L Y + Sbjct: 71 LSGASFPVTFRVDALAALMLLLVHFVALLVQVYSISYLHDEP--------KLRRYSSYLQ 122 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVGVAFG 179 LF+ ML +V + NL+VM+ E L+S L+G Y +R + +AA K ++ VG Sbjct: 123 LFVGAMLGIVLAGNLLVMYGFWELVGLASYLLIGFYAERPAASQAAKKAFLMNRVGDIGF 182 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L G L Y ++ A + + L +G K+ FP+ Sbjct: 183 LIGIFLTYYYFDTLDFTALADKGADGIAP----------TALGLCLFMGCVGKSAQFPLL 232 Query: 240 AWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 WLPDA E P+PVSALL A ++ + +L R + ++ + Sbjct: 233 TWLPDAM-EGPTPVSALLHAATMVAAGIFLLARVHPLLSPDALVVITIIGTITT-----L 286 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 + + Q DIK++LA+S+V +GL+ V +G G + A+ H+L H+ K LF + Sbjct: 287 WGGYSAVFQTDIKKVLAFSTVSQLGLMVVGMGTGN---VAGAMFHLLTHAFFKAGLFLSA 343 Query: 359 GNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN- 417 G ++ ++D+ + G+ K++P T + + A AL+G+P + FLS+ + Sbjct: 344 GAIIHAVHSQDMRQMGGLHKVLPTTFIAYTICAAALSGLPFLSGFLSKEAILGGAFGWAE 403 Query: 418 ------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR----GDLGWLTTSPMVI 467 L I VL+L L + R V + + + GWL P+VI Sbjct: 404 AQASGLALSIPVLVLFSSGLTAFYMARQWRLVFFSAYRSEITPLSAAHEPGWLMRGPVVI 463 Query: 468 LLVMMLAM 475 L + L + Sbjct: 464 LAALSLWL 471 >UniRef50_D2ILR8 NADH-ubiquinone oxidoreductase chain 5 n=3 Tax=Ceractinomorpha RepID=D2ILR8_9METZ Length = 639 Score = 341 bits (876), Expect = 3e-92, Method: Composition-based stats. Identities = 116/498 (23%), Positives = 215/498 (43%), Gaps = 42/498 (8%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLIL----------ALWVVQ 55 M +L PL+ ++L ++ S + + LL++L A++V Sbjct: 1 MIMCILCFPLMGAILAGLWGRKLGSRGSGYWLALLVFGGLLVLLRVVWEIREGGAIYVEL 60 Query: 56 TAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 + ++D + + I+ V+ L +YSIGYM + + + Sbjct: 61 ESWVKAGFVEINWGFYVDYITIAMMFIILVVSGLVHLYSIGYMEGDPH--------VSRF 112 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTV 174 + LF F ML++VT +N ++ E L S L+ +G R ++ +AA K +++ V Sbjct: 113 MSYLSLFTFFMLVLVTGHNYFQLFIGWEGVGLCSYLLINFWGTRLAANKAAIKAMLVNRV 172 Query: 175 GVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 G + G + + ++ +L + + + + LL+G K+ Sbjct: 173 GDMGLIIGMIFLLNQYDTLEYG---------LLSVLYEIGGSELEIIGFCLLVGAVGKSA 223 Query: 235 LFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFG 293 +H WLPDA E P+PVSAL+ A ++ + ++IR + L+ + G Sbjct: 224 QLGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLIIRSADLFVHC---SVVLILMGVIG 279 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 L+ A LVQ D+K+++AYS+ +GL+ + G L +AL H++NH+ K L Sbjct: 280 GLTAFFAGTVGLVQGDLKKVIAYSTCSQLGLMVLACGC---LCFSSALYHLVNHAFFKAL 336 Query: 354 LFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LF +G+++ G +D+ G +MP T V G+L+L G+P F S+ + + Sbjct: 337 LFLSAGSLIHGLGDEQDMRKFGGFRGVMPITYVGILVGSLSLMGVPYLTGFYSKDVGLEL 396 Query: 413 GLARNHL-LIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLGWLTTSPMVI 467 R L+ L + + L A R+ V +P + + W P+VI Sbjct: 397 VYGRYMWGLVYWLGVGSVCLTGAYSGRLIYLVFFGRPRGSWLKYRGVSEGSWCILIPLVI 456 Query: 468 LLVMMLAMGTHIPQPVIR 485 L + + +G + + Sbjct: 457 LSIGSIIVGYGGKEFFLS 474 >UniRef50_UPI00005100B6 putative monovalent cation/H+ antiporter subunit A n=1 Tax=Brevibacterium linens BL2 RepID=UPI00005100B6 Length = 1024 Score = 341 bits (876), Expect = 3e-92, Method: Composition-based stats. Identities = 125/525 (23%), Positives = 229/525 (43%), Gaps = 32/525 (6%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 ++ + AL+++TP + +L A +A + L + T ++A + + Sbjct: 3 LTVVALAALIIVTPFITRVLGRASGWLLAAAYLGIAGLFT--PTAAEVMAGSTPEVSYQW 60 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 F L L DG+G +F I +IG + +YS GY+ +Y Sbjct: 61 IPAFGVDLALRADGIGVIFTYIALIIGAVVFVYSTGYLDR---------GRNTSFYWLMV 111 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 +F F+M+++V SN+L+V++ E T+L+S FL+ G A + + I +G L Sbjct: 112 IFTFSMVMLVLSNDLLVLFVCWELTSLASFFLIARSGSPGQAPA-LRTMFITFIGGLSLL 170 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 T ++ A + ++ + L V + + TK+ FP H+ Sbjct: 171 VATGVIIAVTGTTNVHEALSSPVWSAQ-------SPVTSLVAVLIAVAAMTKSAQFPFHS 223 Query: 241 WLPDAHSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLPDA + A +PVSA L A ++ + +L+R+ + N LL++ G+++ + Sbjct: 224 WLPDAMAAA-TPVSAYLHAAAVVKAGIFLLLRFTPAFH---ATPAWNTLLIVAGLITACI 279 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 +F L Q D+K+L+AYS+V +GL+ +GIG I AA LH++ H+L K+ LF G Sbjct: 280 GGWFALNQYDVKKLMAYSTVSQLGLITAVIGIGSEAAIAAATLHVIAHALFKSGLFMMVG 339 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA-----GL 414 V GTR+L + +++ P + ++ G +++G+PP F+S+ TA G Sbjct: 340 VVDHLAGTRELTRIPQLMRAAPASFIVMIVGCASMSGIPPLLGFVSKEALFTAFGDTPGS 399 Query: 415 ARNHLLIIVLLLLLLTLVLAGLVRMAARVLM-AKPPQAVNRGDLGWLTTSPMVILLVMML 473 A +++ + L A + + KP G + + ++ + Sbjct: 400 AWTGWAALLVAVGASVLTFAYCAKTVWGAFIDGKPVDRARLGHGSPVMLIAAAVPILASI 459 Query: 474 AMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTAS 518 + + ++ A L P + WH AS Sbjct: 460 PLSFAL-FVFDNPISQAVRAAL-YESTGPVHLALWHGVNVELIAS 502 >UniRef50_Q9UYP1 Hydrogenase 4, component F or formate hydrogen lyase, subunit 3 n=1 Tax=Pyrococcus abyssi RepID=Q9UYP1_PYRAB Length = 499 Score = 341 bits (875), Expect = 4e-92, Method: Composition-based stats. Identities = 127/509 (24%), Positives = 226/509 (44%), Gaps = 28/509 (5%) Query: 9 LLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQ---------TAAD 59 L + PL+F+ + + LG L LI + Q Sbjct: 6 LTPIIPLVFAFALPLFSVVVGGNRKIIQAYALLGTGLTLISTFKLFQLTYSSSLPIVYTF 65 Query: 60 AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 G+ +D L L + V+ FL IYS Y+ E L YY + Sbjct: 66 GKWRAPIGIVYEVDRLSSLIALVTAVLMFLIAIYSYRYLEREKG--------LEWYYTLY 117 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAF 178 +L V+ + + ++ IE T++++ LV Y R S+ A KY +I VG Sbjct: 118 LGLESGLLGVLLTGDAFNLFVMIEVTSIAAYALVMFYRDRKDSVLAGLKYALIGAVGTTM 177 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 + Y +V S + +A V F K +FP Sbjct: 178 YFLALGVFYGTFGTVNFADLSEKLHSSGNVVLAS------SVALVLATWAFLIKATIFPN 231 Query: 239 HAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGS--DFPNRLLLIFGMLS 296 H WLP+AH APSP+SA+LS +++N + +IR+ + + + + ++I G +S Sbjct: 232 HFWLPEAHPAAPSPISAILSGLVVNVGVYAMIRFLYTLYSGLSWIIGWLSFAIIILGAIS 291 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 A + QRD+KRL+AYS++ +MG + + +G+G LG+ AAL H++NH++AK LLF Sbjct: 292 SIFGALMMNTQRDVKRLVAYSTIMHMGYLLMAVGVGTQLGLQAALFHLINHAIAKALLFL 351 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 G + G+R+++ + G+ + MP T L+L G+PP N+F S+ + A L + Sbjct: 352 AVGVFIHVAGSRNIDDLAGLGRKMPITTFSLAIATLSLVGIPPLNVFFSKLLLFNALLEK 411 Query: 417 NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMG 476 + L +V+ + + L +R+ + + KP + ++ + + +IL ++ +A+G Sbjct: 412 SFFLALVIAV-TSVIALVAYMRVLYTLWLGKPREDLDVKE-SISMSMICLILALICIAIG 469 Query: 477 THIPQPVIRILAGASTIVLSGTHDLPAQR 505 P + +++ A + + A Sbjct: 470 LIAPIVLEKLINPAVIQAMDYETYVRAAL 498 >UniRef50_Q6MDQ5 Putative NADH-ubiquinone oxidoreductase chain L n=2 Tax=Parachlamydiaceae RepID=Q6MDQ5_PARUW Length = 628 Score = 341 bits (875), Expect = 4e-92, Method: Composition-based stats. Identities = 133/528 (25%), Positives = 232/528 (43%), Gaps = 44/528 (8%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILA-LWVVQTAADAG 61 M L L PL+ L+ F +R +T + ++ + L+ L L+ A Sbjct: 1 MWQMVGLGLFLPLIGFLILFTNSQRLSRSTTSFIGCSTILLAFLIFLGELYFYVHAGMNS 60 Query: 62 EIFAAGLWL-----------HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPV 110 + F WL H+D L L I+ +GFL +YS+GYM HE Sbjct: 61 QTFPLYQWLTLNGIQVNFSWHLDSLSLLMTLIITGVGFLIHLYSVGYMDHEKD------- 113 Query: 111 TLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYI 169 Y+ + F+F MLL+V + +L++++ E L+S L+G + Q+ + +AA K Sbjct: 114 -FTRYFACLNFFIFAMLLLVLAGDLLMLFIGWEGVGLASYLLIGFWYQKPSAAKAATKAF 172 Query: 170 IICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGF 229 ++ +G L G +L + + S++ KQ+ + ++ + + G Sbjct: 173 VVNRIGDLGFLLGLLLTLHTFGTTDIASI-----SQLAKQTFSIGAPIITVMTLLYFWGA 227 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRL 288 K+ P++ WLPDA E P+PVSAL+ A ++ + +++R + + S + Sbjct: 228 TGKSAQLPLYHWLPDAM-EGPTPVSALIHAATMVTAGIYLIVRTHTLF---DLSPLTLHV 283 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 + I G ++ A L Q D+KR+LAYS+V +GL+ + GIG +AA+ H+ H+ Sbjct: 284 VGIVGGMTALFAGLCALAQTDLKRVLAYSTVSQLGLMFLACGIG---AYYAAMFHLTIHA 340 Query: 349 LAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 K LLF +GNV+ T L + G+ KI T LF GAL+LAG+ PF F S+ Sbjct: 341 FVKALLFLSAGNVVHMMYDTTALEKMGGLSKIFTKTRWLFLIGALSLAGVFPFAGFFSKD 400 Query: 408 MTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLGWLTTS 463 + + G L+ + L+ L ++R+ +P + + + Sbjct: 401 LILELGYLSGSHLLFSMGLVASLLTGVYMLRVYCLTFHGEPRSTQQELSQVQEAPAMMVI 460 Query: 464 PMVILLVMMLAMG-----THIPQPVIRILAGASTIVLSGTHDLPAQRS 506 P+ IL ++ + G + +I L + S Sbjct: 461 PVSILGLLSIVGGFLGFRFYSTPALINFLEEIGISSIEKNLSTGLHLS 508 >UniRef50_B6YTX9 Hydrogenase 4, component F or formate hydrogen lyase, subunit 3 n=3 Tax=Thermococcus RepID=B6YTX9_THEON Length = 522 Score = 341 bits (875), Expect = 5e-92, Method: Composition-based stats. Identities = 124/520 (23%), Positives = 226/520 (43%), Gaps = 30/520 (5%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQT--------- 56 + L + P+LF+ + + +G L L+ + + + Sbjct: 3 IVGLTPVIPILFAFALPLTSIIVRGNRKIIQAYALIGTGLTLLASYELFRQVYNSSKPLI 62 Query: 57 AADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 G G+ +D + LF + + FL IYS Y+ HE L YY Sbjct: 63 YTFGGWTAPVGIIYEVDRMSALFALVTAALMFLIAIYSYRYLEHEEG--------LEWYY 114 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVG 175 + +L V+ + + ++ IE T++++ LV Y R S+ A KY I +G Sbjct: 115 TLYLGLEAGLLGVLLTGDAFNLFVMIEVTSIAAYALVMFYRDRGDSICAGLKYAFIGALG 174 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLML---LAFVFLLIGFGTK 232 +Y ++ A+ + + + +A F K Sbjct: 175 TTMYFLALGTLYGAFGTLNMANLSALIHGLSFPIAGTTYGNIAIASGVALALATWAFLIK 234 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPN------ 286 + P H WLP+AH APSP+SA+LS +++N + LIR+ + S Sbjct: 235 AAIVPNHFWLPEAHPAAPSPISAILSGLVVNVGVYSLIRFLYTVYGGEVSGSLGGVIHAL 294 Query: 287 -RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 +L++ G +S A + QRD+K+L+AYS++ +MG +A+ +G+G L + AA HI+ Sbjct: 295 SVILIVLGAVSALFGALMMNAQRDVKKLIAYSTIMHMGYLAMAVGVGTQLALQAAAFHII 354 Query: 346 NHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 NH++AK LLF +G + G+RD++ + G+ + MP L+L G+PPFN+F S Sbjct: 355 NHAIAKALLFLAAGAFIHAVGSRDISDLAGLGRQMPVATFGLAIATLSLVGIPPFNVFFS 414 Query: 406 EFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPM 465 + + A + + + ++L+L + L VR+ + + KP + + G + + Sbjct: 415 KLLLFNAFMEES-PALALVLVLSSVIALVAYVRVFQEIWLGKPRENTTIREHG-SMSGVL 472 Query: 466 VILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQR 505 +IL V+ L +G P + + A + + + Sbjct: 473 LILAVICLLLGLFAPYIIEHYINPAVSQAMDYRLYIQTAL 512 >UniRef50_C1AB28 NADH-quinone oxidoreductase chain L n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AB28_GEMAT Length = 631 Score = 340 bits (874), Expect = 5e-92, Method: Composition-based stats. Identities = 118/530 (22%), Positives = 214/530 (40%), Gaps = 48/530 (9%) Query: 3 YSVMFALLLLTPLLFSLLCF---------ACRKRRLSATRTVTVLHSLGITLLLILALWV 53 S AL+ L PL+ +L R + L S +T+ L+L Sbjct: 1 MSHTLALIALLPLVGFVLNGTFATALGGHRFGHRAAALIGCAAPLASFALTISAFLSLQA 60 Query: 54 VQTAADAGEIF--------AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHG 105 A ++ + + + D L + I+ +G + IYS GYM + + G Sbjct: 61 NGYAPVVEPLYRWATVGGNSFDIAFYFDRLSAIMTLIVTGVGSVIHIYSTGYMHDDKSFG 120 Query: 106 ELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEA 164 ++ + +LFLF MLL+V +++V++ E L+S L+G + ++ A Sbjct: 121 --------RFFAYLNLFLFFMLLLVLGRSMLVLFVGWEGVGLASYLLIGFWFDDLANAAA 172 Query: 165 AWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVF 224 K I +G A L G L+Y ++ + S L + Sbjct: 173 GRKAFITNRIGDAGFLLGMFLLYRAFGTLDMDTINGALVAGQGAMIS------ASLVALL 226 Query: 225 LLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSD 283 L +G K+ P++ WLPDA + P+PVSAL+ A ++ + ++ R + A Sbjct: 227 LFVGATGKSAQIPLYVWLPDAMA-GPTPVSALIHAATMVTAGVYLVARMSAVYVLAPD-- 283 Query: 284 FPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLH 343 ++++ + G+L+ AA LVQ DIK++LAYS+V +G + + LG+G A+ H Sbjct: 284 -ASQVMAVIGVLTAFFAATIALVQTDIKKVLAYSTVSQLGFMFLALGVG---AYGVAIFH 339 Query: 344 ILNHSLAKTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNI 402 ++ H+ K LF G+G+V+ G +D+ + G+ K +P T F A+AG+P Sbjct: 340 VMTHAFFKACLFLGAGSVIHALGGEQDIRKMGGLRKRIPVTFWTFAIATAAIAGIPGLAG 399 Query: 403 FLSEFMTITAGLAR---NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRG 455 F S+ + + + L L + + R+ + Sbjct: 400 FFSKDEILWYAFSSASGGAAWMWGLAALTALMTAFYMTRLLWLTFFGASRMSHEVEHHVH 459 Query: 456 DLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQR 505 + T + +L V+ + G + +V + H Sbjct: 460 ESPLSMTGVLGVLAVLSVVGGYIGVPHFLEPQLPLPQVVPALEHYEHTLL 509 >UniRef50_UPI00016C46D7 NADH dehydrogenase I chain L n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46D7 Length = 652 Score = 340 bits (873), Expect = 8e-92, Method: Composition-based stats. Identities = 112/467 (23%), Positives = 195/467 (41%), Gaps = 37/467 (7%) Query: 30 SATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFL 89 + + +L + A + A + +D L + L+++ I Sbjct: 43 GSAAVIALLLLTKVMDGGNAATFSEPVTWFAAGHLNVRFTIAVDPLSAMMLSMITFIATW 102 Query: 90 TGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSS 149 +++ GYM + ++ LF+F+M +V +NN +++ A E L S Sbjct: 103 IALFASGYMHGDGG--------FARFFAVMSLFVFSMCGLVLANNFLLLVAFWEGVGLCS 154 Query: 150 AFLVGIYGQRSSLE-AAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLK 208 LVG Y ++ S AA K ++ +G L G L++ + Sbjct: 155 YLLVGYYFEKPSAATAARKAFLVTRIGDTGFLLGIFLLWKLGG-----WHTDLNLLFDHI 209 Query: 209 QSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALL 267 Q + + A + L G K+ FP++ WLPDA E P+PVSAL+ A ++ + Sbjct: 210 QRHPPEQWQLTTACLLLFCGAVGKSAQFPLYVWLPDAM-EGPTPVSALIHAATMVTAGVY 268 Query: 268 VLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAV 327 +L R + A ++ G ++ +AAF L Q D+KR+LAYS+V +G + + Sbjct: 269 LLARCSPLFAMAPD---AQIVVSWVGGITAILAAFIALAQTDLKRVLAYSTVSQLGFLFL 325 Query: 328 ELGIGGPL----GIFAALLHILNHSLAKTLLFCGSGNVLLKYGTR-DLNVVCGMLKIMPF 382 LG G + + AA+ H+ H+ K LLF +G+V+ G D+ G+ K+MP Sbjct: 326 ALGTSGTIDPKFAVVAAMFHLFTHAFFKALLFLAAGSVMHGMGGVIDVRQFGGLRKVMPI 385 Query: 383 TAVLFGGGALALAGMPPFNIFLSEFMTITAGLA---------RNHLLIIVLLLLLLTLVL 433 T + F GA ALAG+P + F S+ + + + L + + ++ L Sbjct: 386 THLTFLCGAGALAGVPLLSGFWSKDLILESLLEASETGSRYTAGYFALFLVACTTAFLTA 445 Query: 434 AGLVRMAARVLMAKP----PQAVNRGDLGWLTTSPMVILLVMMLAMG 476 R + + T P+V+L V LA+G Sbjct: 446 FYTFRAYFLTFWGPEKIPHEAGHHAHESPPSMTIPLVVLAVGALAVG 492 >UniRef50_C0GDB1 NADH dehydrogenase (Quinone) n=2 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDB1_9FIRM Length = 782 Score = 340 bits (873), Expect = 9e-92, Method: Composition-based stats. Identities = 124/538 (23%), Positives = 215/538 (39%), Gaps = 45/538 (8%) Query: 4 SVMFALLLLTPLLFSLLCFACRKRRLSAT---RTVTVLHSLGITLLLILALWVVQTAADA 60 S++ + PL SLL F + +T L + GI + + + Sbjct: 18 SLLPVFAVAVPLAGSLLVFFAGRFSEKLRDICAVITALITFGIVFSMYPLVQQAVLQYEF 77 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 + + +D G +F A++ I FL +YSI YM H A YY F Sbjct: 78 AKFLQVSIHFRVDFFGFVFAALMSCIWFLATLYSIAYMEHGRAKN--------RYYVFLL 129 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 L L VV +L ++ E T SS LV ++ + + G L Sbjct: 130 STLGHCLGVVLVGDLFSLFLFFELMTFSSYVLVIHEETPDAMAGGAVTLYLGVFGGLCLL 189 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 L+Y N ++ + + +++ L+GFG K G+ P+H Sbjct: 190 MAIFLLYFNVGTMEIIPLYEQIAASAINPYTVVT---------LFLVGFGIKAGMVPLHI 240 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIIC----------QAIGSDFPNRLLL 290 WLP AH AP+P SALLS +++ + R +I +I S ++ Sbjct: 241 WLPKAHPVAPAPASALLSGLMIKAGAYGIFRVVGMIFTPSEFSEVAVPSIVSVNFGYAII 300 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVE------LGIGGPLGIFAALLHI 344 G++++ + AF L+ K++LAYSSV MG + + LG GP+G AL HI Sbjct: 301 WMGIITMFLGAFMALLSTGAKKILAYSSVSQMGYILLGVGTAAYLGFAGPMGFAGALYHI 360 Query: 345 LNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 +NH+ K LF G++ + D+ V GM K +PF AV F G + G+P FN + Sbjct: 361 INHAFFKAGLFMMVGSIYMITHNLDITQVRGMAKKVPFIAVTFLIGYAGIGGIPGFNGYG 420 Query: 405 SEFMTITAGLARNHLLIIV-------LLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDL 457 S+ + A + +L V + ++ + L ++ + + P+ ++ Sbjct: 421 SKTILHHAIVDAANLHGSVPLHVAEKIFVVTSAMTLCYFAKLFRGLFLGDVPEKYDKKSY 480 Query: 458 G--WLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLP 513 W + + +++A+G + R++ A + + + P Sbjct: 481 NFTWPVYAVLGTFGAIIIAIGLFPHFLLNRMVIPAMAGFTYDPYKVAYLENLSVWIWP 538 >UniRef50_Q28L00 NADH dehydrogenase (Quinone) n=1 Tax=Jannaschia sp. CCS1 RepID=Q28L00_JANSC Length = 782 Score = 340 bits (872), Expect = 9e-92, Method: Composition-based stats. Identities = 117/490 (23%), Positives = 204/490 (41%), Gaps = 24/490 (4%) Query: 21 CFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFL 80 +S + L + A D L + IDGL F Sbjct: 11 VAGGPAGWMSVVVPAALFLWFAQFLPAVAAGETPLIGIDWVPSMDVRLEMLIDGLSLTFA 70 Query: 81 AILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWA 140 ++ IG L +YS Y+ + + + + F+ ML +V ++NLI ++ Sbjct: 71 LLITGIGTLVTLYSTRYLGNHPEY--------PRFVLYLLTFMVGMLGLVLADNLIALFV 122 Query: 141 AIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEM 199 E TT+SS L+G S +A + +++ G L G +L+ A A + Sbjct: 123 FWEVTTISSYLLIGFTSDSAKSRRSALQALLVTGTGGLALLAGMILLGAAAGTYSLTEIR 182 Query: 200 AIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS- 258 + ++ L + + L G TK+ FP H WLP+A + AP+PVSA L Sbjct: 183 GM-------GDAIRQHDLYIPILILFLAGAFTKSAQFPFHFWLPNAMA-APTPVSAYLHS 234 Query: 259 AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSS 318 A ++ + ++ R + G++ L+I G + A+ + Q DIK++LAY++ Sbjct: 235 ATMVKGGVYLMARMNPTLG---GTEPWFWALVIAGGFTTVFASVLAIRQTDIKQVLAYTT 291 Query: 319 VENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLK 378 + +G + + +G G I AA+L ++ HSL K LF G V + GTR++ + G+ + Sbjct: 292 LMALGALTLFIGAGSSDAIKAAMLFLVVHSLYKAALFLMIGIVDNQTGTREVAHLRGLAR 351 Query: 379 IMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLA--RNHLLIIVLLLLLLTLVLAGL 436 MP T A+++AG+PPF F+ + AGL L II + L+ Sbjct: 352 KMPITFFAGALAAISMAGIPPFVGFIGKEFLYKAGLEIDTAGLWIIGTIFAASVLMFVAA 411 Query: 437 VRMAARVLMAK-PPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVL 495 AR + + P + + + +IL + L G P + ++ A+ V Sbjct: 412 GISVARPFLGRLPDRFKDTTEGPISMWLGPIILGALSLYFGIFADIPEVWLVGPATDAVY 471 Query: 496 SGTHDLPAQR 505 + Sbjct: 472 GSDVSVDLYL 481 >UniRef50_A5GD02 Proton-translocating NADH-quinone oxidoreductase, chain L n=7 Tax=Geobacter RepID=A5GD02_GEOUR Length = 666 Score = 339 bits (871), Expect = 1e-91, Method: Composition-based stats. Identities = 104/439 (23%), Positives = 190/439 (43%), Gaps = 33/439 (7%) Query: 18 SLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAG----LWLHID 73 +++ +R V S +L +A + A + L++D Sbjct: 20 AVIGRQLPRRIAETLACGVVWVSFVCSLSAFVAYRAPLKVELGSWLAAFDFKAPITLYLD 79 Query: 74 GLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSN 133 L + + ++ + L +Y++GYM + + ++ +LF+F ML++V + Sbjct: 80 PLSLVMVLMITFVCGLIHVYAVGYMADDPDY--------ARFFALLNLFVFAMLVLVLAE 131 Query: 134 NLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFGLFGTVLVYANAAS 192 NL +++ E S L+G + + + A K I+ +G V ++ ++ Sbjct: 132 NLPLLYLGWEGVGFCSYALIGFWYREEKNATAGRKAFIVTRIGDTAFGIAVVWMFQLFST 191 Query: 193 VMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSP 252 V + + L+ ++ + LLIG K+ P+ WLPDA + P+P Sbjct: 192 VSITELNGLGF--------LMPAGVITALGLLLLIGAMGKSAQLPLMVWLPDAMA-GPTP 242 Query: 253 VSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIK 311 VSA + A ++ + +L R + +I S + + G L+ AA L QRD+K Sbjct: 243 VSAQIHAATMVTAGVYLLARMFPLIG---ASATVQGAIALTGGLTAFYAASCALAQRDLK 299 Query: 312 RLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLK-YGTRDL 370 R+LAYS++ +G + + +G G I AA H+L H+ K LLF +G V+ + +D+ Sbjct: 300 RVLAYSTISQIGYMMLGVGCG---AITAATFHLLVHAFFKALLFLAAGCVITALHHEQDI 356 Query: 371 NVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL---ARNHLLIIVLLLL 427 + G+ + +P T F GA+ LAG+P F S+ +TA + + +L L Sbjct: 357 FRMGGLRRNLPLTFWPFLAGAVCLAGLPLTGGFFSKDAILTAAWGKGGLLYGGLYLLGLF 416 Query: 428 LLTLVLAGLVRMAARVLMA 446 L RM V Sbjct: 417 TALLTSVYTFRMVYLVFGG 435 >UniRef50_C8W236 Hydrogenase, membrane subunit n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W236_DESAS Length = 661 Score = 339 bits (871), Expect = 1e-91, Method: Composition-based stats. Identities = 142/525 (27%), Positives = 234/525 (44%), Gaps = 45/525 (8%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVV-----QTAADA 60 + +++L L ++L + R + L L L L L + T Sbjct: 9 LGLMVILLYLSGAILPLLLKTSRKLSLWLGCFLGGAAGLLGLGLGLASLLAPEPWTVNLG 68 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 + + +DGL G F+A + ++ L YS YM + + ++ Sbjct: 69 TVLPGVVFQIVMDGLSGFFVATISLVVALVSFYSWNYMSIYK------TENIAWWSFCYN 122 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFG 179 +F+ +MLLVVT N I+ E TL+S FLV Y + +A + YI++ +G F Sbjct: 123 VFVLSMLLVVTVTNAIMFLIFWELMTLASYFLVTFEYRHQQVRKAGFSYIVMTHLGTVFI 182 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 + L++ A S L + L FV LIGFGTK G+ P+H Sbjct: 183 MTAFFLMFKGTGGWDFAVLSA--------NSHGLPDAVKSLIFVCALIGFGTKAGIVPLH 234 Query: 240 AWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLP AH APS VSA++S V+L A+ +IR I I G + ++L G++S + Sbjct: 235 IWLPLAHPAAPSNVSAVMSGVMLKTAIYGMIRLIIDILG-PGPAWWGGVVLAVGVVSAVM 293 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHS 348 + L++ D+KRLLA+ SVEN+G++ + LG + + A L H+LNH+ Sbjct: 294 GVLYALMEHDMKRLLAFHSVENIGIILMGLGTALIFYAWSMPVAAAVALAAGLFHVLNHA 353 Query: 349 LAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 + K+LLF G+G+V ++D+ + G++K MP TA+LF GA++++ +PPFN F SE+ Sbjct: 354 IFKSLLFLGTGSVYYTTHSKDIEELGGLIKKMPQTALLFLVGAISISAIPPFNGFASEYQ 413 Query: 409 TITAGLARNHLLIIVLLLLLLTLVLA-----------GLVRMAARVLMAKPP--QAVNRG 455 + L ++ + + L V+ +A P +A Sbjct: 414 IYQSLLGMSYQKVSAFWSIAGVLSGVALALTGALAAACFVKAFGISFLALPRTKKAAAAE 473 Query: 456 DLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHD 500 ++ +L M L V+ L G + I +V Sbjct: 474 EVPFLMRISMAPLAVLCLLFGVAPGLVLNNITPLIEQLVPGTPLP 518 >UniRef50_C7NST6 NADH dehydrogenase (Quinone) n=4 Tax=Halobacteriaceae RepID=C7NST6_HALUD Length = 801 Score = 338 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 122/481 (25%), Positives = 202/481 (41%), Gaps = 28/481 (5%) Query: 7 FALLLLTPLLFSLLCFACRKR-RLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 ++L P L + + + + +L L+ + Sbjct: 9 LLVVLALPFLAAAVAPLVYRLVGERVAYFGAAVAALAFGLIGTQYGAEGVVSIPWIPSLD 68 Query: 66 AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFT 125 L L++DGL L ++ IG L YS GYM E + +Y +F+ Sbjct: 69 VSLALYVDGLSLLLGFVVSGIGILIFTYSGGYMHDEPGKAK--------FYTTLLVFMGA 120 Query: 126 MLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAWKYIIICTVGVAFGLFGTV 184 ML V + +L+ ++ E T++SS L+G Y S AA K +II G F L + Sbjct: 121 MLGVAFAADLLALFVFWELTSVSSFILIGHYQDDPDSQYAARKAMIITVAGGLFLLIAFL 180 Query: 185 LVYAN------AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 L++ A+ E ++ + + L L + L +G K+ P+ Sbjct: 181 LLHTVSADVMGTATFRLAGEGSMIENAGAMRERLRSAGLFVPVLALLAVGAAAKSAQVPL 240 Query: 239 HAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSV 297 H WLP+A EAP+PVSA L A ++ + ++ R+ ++ GS L G+L++ Sbjct: 241 HIWLPNAM-EAPTPVSAFLHSATMVKAGVYLIGRFRPLL----GSTEWELLFAGLGLLTM 295 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 V A + DIK LLAYS+ ++GL+ GI G HILNH+L K LF Sbjct: 296 TVGAMLAIKADDIKELLAYSTASHLGLIVAGFGIQYKYGAETGAFHILNHALFKAALFLV 355 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 +G V + G+R L+ + G+ + +P TA + AL +AG+PPFN F S+ + A Sbjct: 356 AGIVAHEAGSRLLSELGGLWRDLPITAAVAVVAALGMAGLPPFNGFYSKELLFEATFHAA 415 Query: 418 ------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVM 471 L+ V+ + ++ + +P + +P VIL + Sbjct: 416 EHAGGLWWLLPVVAVFGSIFTFLYSIKFLSLFFGDRPDALEHVHSPPLPMLAPPVILATL 475 Query: 472 M 472 Sbjct: 476 A 476 >UniRef50_Q8HHD2 NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Cryphonectria parasitica RepID=NU5M_CRYPA Length = 656 Score = 338 bits (868), Expect = 3e-91, Method: Composition-based stats. Identities = 105/502 (20%), Positives = 213/502 (42%), Gaps = 44/502 (8%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG---- 61 M+ +++ P+L S++ ++ + + +T +L L WV + Sbjct: 1 MYLSIIILPVLGSIVAGFFGRKLGVRGAQIITCSCVIVTTILALLAWVEVGFNNIPVTIN 60 Query: 62 -------EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 E F D L L + +I L IYSI YM + + Sbjct: 61 LFRWIDSEWFNIIWGFQFDSLTVSMLLPVLIISSLVHIYSISYMSGDPHNQ--------R 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICT 173 ++ + LF F M+++VT NN ++M+ E + S LV + R ++ +++ + Sbjct: 113 FFSYLSLFTFMMIILVTGNNYLLMFVGWEGVGVCSYLLVSFWFTRIAANQSSISAFLTNR 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 VG F G + + ++ ++ + ++ ++ + + L+IG K+ Sbjct: 173 VGDCFLTIGMFAILWSLGNLDYATVFSL--------APYINENIITIIGICLVIGAMAKS 224 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 +H WLP A E P+PVSAL+ A ++ + +L+R +I S + L Sbjct: 225 SQVGLHVWLPMAM-EGPTPVSALIHAATMVTAGVYLLMRSSPLIEY---SSTVLLICLWL 280 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G ++ ++ L Q+DIK+++AYS++ +GL+ V +G+ AL H++NH+ K Sbjct: 281 GAITTVFSSLVGLFQQDIKKVIAYSTMSQLGLMVVAIGLSS---YNIALFHLVNHAFYKA 337 Query: 353 LLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 LF G+G+++ +D G+ + +P T + +L+LA P F S+ + + Sbjct: 338 ALFLGAGSIIHAVADNQDFRKYGGLREFLPLTYSIILIASLSLAAFPFLTGFYSKDLILE 397 Query: 412 AGLAR---NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA----VNRGDLGWLTTSP 464 + + + + + + + V++ +A P + + + T P Sbjct: 398 SAFGQFTFSGVSVYAISTIGAIFTTLYSVKVIYLTFLANPNGSLMTVRHAHEGDIFLTLP 457 Query: 465 MVILLVMMLAMGTHIPQPVIRI 486 +VIL + + G I + Sbjct: 458 LVILAIFSIFFGYLTKDIFIGL 479 >UniRef50_P23482 Hydrogenase-4 component B n=69 Tax=Bacteria RepID=HYFB_ECOLI Length = 672 Score = 338 bits (867), Expect = 3e-91, Method: Composition-based stats. Identities = 126/536 (23%), Positives = 228/536 (42%), Gaps = 45/536 (8%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLI-----LALWVVQ 55 M + L+ L SL A + + +G + +I L V Sbjct: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 Query: 56 TAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 A A A L L +D L + ++ ++ + +YS+ YMR G + Sbjct: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG----- 115 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVG 175 F ++F+ +M+ ++ +N E +LSS FLV ++S+ A Y I G Sbjct: 116 -FFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAG 174 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGL 235 + +L+ + S+ + + L P L F+ GFG K G+ Sbjct: 175 SVLIMIAFLLMGRESGSLDFASFRTLS----------LSPGLASAVFLLAFFGFGAKAGM 224 Query: 236 FPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD-FPNRLLLIFGM 294 P+H+WLP AH APS SAL+S V++ + +++ + + G + L++ G Sbjct: 225 MPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGA 284 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLH 343 +S + + L ++DIKRLLA+S+VEN+G++ + +G+ +G+ AL H Sbjct: 285 ISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFH 344 Query: 344 ILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 +LNH+L K LLF G+G ++ + T D+ + + K MP+TA G LA++ +PP N F Sbjct: 345 LLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGF 404 Query: 404 LSEFMTITA----------GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP--QA 451 +SE+ T + L + +V+L + L + V+M P A Sbjct: 405 ISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA 464 Query: 452 VNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRST 507 ++ M++L + + + +I+ A + + + + Sbjct: 465 EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIAL 520 >UniRef50_C8NJU8 NADH ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, A subunit n=16 Tax=Corynebacterineae RepID=C8NJU8_COREF Length = 1018 Score = 337 bits (866), Expect = 5e-91, Method: Composition-based stats. Identities = 116/540 (21%), Positives = 209/540 (38%), Gaps = 48/540 (8%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL-------WVVQTAA 58 M L L R A + ++ + G + + + Sbjct: 1 MLILFLALTAAAVFAPLLIRTLGRPAFGLLALVPAAGFFWVAYEFIQGTFRDGGELLLHY 60 Query: 59 DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 D + + +D L LF I+ +G L +Y GY L + G Sbjct: 61 DWMPSVHLNITMRLDSLAALFSLIILGVGALVLLYCWGYFDSNPG-------RLSAFGGQ 113 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVA 177 F M +V S+N+++M+ E T++ S LVG YG+R+S +A + +++ T+G Sbjct: 114 LVGFAMAMYGLVISDNILLMYVFWEITSVLSFLLVGYYGERASSRRSAGQALMVTTLGGL 173 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L G +L+ A + + D + + + +L G +K+ + P Sbjct: 174 AMLVGIILIGVQTGVWYFSDVPAF-------EGNWADVPYISIGALLILAGALSKSAIAP 226 Query: 238 MHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 H WLP A + AP+PVSA L A ++ + ++ R + L G+ + Sbjct: 227 THFWLPGAMA-APTPVSAYLHSAAMVKAGIYLVARLAPDF---NVVSSWYLITLPLGIFT 282 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + ++ + L Q+D+K +LAY +V +G + GIG + A L +HSL K LF Sbjct: 283 MIMSGWMALRQKDLKLILAYGTVSQLGFIISVAGIGTREALLAGLALTFSHSLFKATLFM 342 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 G + GTRD+N + G+ + P L A ++AG+PP F+++ I + L Sbjct: 343 VVGAIDHTTGTRDINQLSGLWRRQPLMFALAAISAASMAGIPPLFGFIAKETAIDSVLYE 402 Query: 417 NHL------LIIVLLLLLLTLVLAGLVRMAARVLM----------AKPPQAVNRGDLGWL 460 L L++ ++L +A + + + Sbjct: 403 GMLRGMPGNLMLAGIILGSIFTMAYSLYFLYGAFATKRQLFPRNNGVSTAVAESHPVAFK 462 Query: 461 TTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDF-LPSGTASV 519 IL + + +G + A T + + T P + WH F LP +++ Sbjct: 463 LWIAPFILTSLTVLLGLFPA----PLSAPIVTHLDNVTPGEPTYLALWHGFNLPLALSAI 518 >UniRef50_A2T411 NADH-ubiquinone oxidoreductase chain 5 n=7 Tax=Metazoa RepID=A2T411_9METZ Length = 678 Score = 337 bits (866), Expect = 5e-91, Method: Composition-based stats. Identities = 117/548 (21%), Positives = 214/548 (39%), Gaps = 79/548 (14%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA----- 60 M+ L+L P + + + + + +G + L+ L DA Sbjct: 1 MYLLVLFLPFINAFFLGFFGRLIGTTGSGILSTICMGSSTLIAFFLAYEVLVNDAVVHIE 60 Query: 61 ------GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 EIF + L D L L ++ I L IYS YM + + Sbjct: 61 LYKWIESEIFITHIGLLFDTLSVTMLLVISSISTLVHIYSTSYMSDDPH--------VPR 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICT 173 + + LF F M+++VTS+N + ++ E + S LV + R + +AA K I++ Sbjct: 113 FICYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNR 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVL-------KQSSLLDPTLMLLAFVFLL 226 VG + G VL+Y S+ + +++ + + LL Sbjct: 173 VGDVGVILGMVLIYKTIGSLDFLTFNGGSIGSGIMDRGYSEGRANGAPLAPFAIIGILLL 232 Query: 227 IGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFP 285 IG K+ +H WLPDA E P+PVSAL+ A ++ + ++IR + + +A F Sbjct: 233 IGCIGKSAQLGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLMIRSFPLFEKA---PFT 288 Query: 286 NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 ++ IFG L+ AA LVQ D+K+++AYS+ +G + + +GI G + L H++ Sbjct: 289 LLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSQNV--GLFHLV 346 Query: 346 NHSLAKTLLFCGSGNVLLKY--GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIF 403 NH+ K LLF +G+V+ +D+ + G++ +PFT + G+ ++ G+P F Sbjct: 347 NHAFFKALLFLSAGSVIHSMTIDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGF 406 Query: 404 LSEFMTITAGL-------------------------------------ARNHLLIIVLLL 426 S+ + + R L Sbjct: 407 YSKDLILELTYFCKNMAIPDRGSIGSPELYIQKDLGDPYPVQAYGLGPFRASAFAFWLGT 466 Query: 427 LLLTLVLAGLVRMAARVLMAKPPQAV------NRGDLGWLTTSPMVILLVMMLAMGTHIP 480 + L +R+ + P + + + + +L + +G I Sbjct: 467 VAALLTAFYSIRLVYITFIITPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYLIQ 526 Query: 481 QPVIRILA 488 +I + Sbjct: 527 DILIGDIE 534 >UniRef50_C0VMK3 NADH dehydrogenase I subunit L n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VMK3_9GAMM Length = 631 Score = 337 bits (865), Expect = 7e-91, Method: Composition-based stats. Identities = 129/507 (25%), Positives = 223/507 (43%), Gaps = 44/507 (8%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI--- 63 L +L PL+ +L A R + + + S+G++ + L + T + Sbjct: 4 LYLTILFPLIGFILLAAGRNKLSENVAAIIGVGSVGLSAVFALIAGLAFTNSGDTVFVQH 63 Query: 64 ---------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 FA G+ L +DGL + + ++ +GFL I++ YMR E + Sbjct: 64 LWTWFNVGGFAPGISLQLDGLSLIMMGMVTGVGFLIHIFASWYMRGEEDY--------AR 115 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICT 173 ++ +F+LF+ +MLL+V +NL +++ E L S L+G Y + AA K + Sbjct: 116 FFSYFNLFVASMLLLVLGDNLALLFLGWEGVGLCSYLLIGFYYSNPANGWAAIKAFTVTR 175 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 VG F L L+Y ++ Q + + + + +L + + L +G K+ Sbjct: 176 VGDVFLLIALFLLYQQFGTLNTQYIVENAATVMTQ-----SSSLSIWTALMLFLGAAGKS 230 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 P+ WL DA + P+PVSAL+ A ++ + + R + ++ A + + I Sbjct: 231 AQIPLQTWLADAMA-GPTPVSALIHAATMVTAGVYLCCRMFSVMEMA---PEVMQFISIT 286 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G +++ VA F LVQ DIKR+LAYS++ +G + + +G A L H+L H+ K Sbjct: 287 GAVTLLVAGFAALVQTDIKRILAYSTMSQLGYMFMAVGA---EAYQAGLFHMLTHAFFKA 343 Query: 353 LLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFN-IFLSEFMTI 410 LLF SG V+L + +++ + G+ K F F G ALA +P F S+ + Sbjct: 344 LLFLSSGAVILAYHHEQNIFKMGGLFKHNKFLFACFAIGGGALAAIPFLTVGFFSKDAIL 403 Query: 411 TAGLARNHL-------LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTS 463 A H + + + L R+ V + A + G + Sbjct: 404 WQVWAHGHTTGIETFGTLFWVGVAGAFLTSIYTFRLIWIVFFGEEKTAYHPIK-GATYWA 462 Query: 464 PMVILLVMMLAMGTHIPQPVIRILAGA 490 P+ IL V+ +G + PVI IL A Sbjct: 463 PLAILAVLSTGVGALLQAPVIGILNQA 489 >UniRef50_Q24ST7 Hydrogenase-4 component F n=3 Tax=Desulfitobacterium RepID=Q24ST7_DESHY Length = 499 Score = 337 bits (864), Expect = 8e-91, Method: Composition-based stats. Identities = 180/494 (36%), Positives = 285/494 (57%), Gaps = 1/494 (0%) Query: 15 LLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDG 74 + + A +++R + + +SL + LL LA ++ G G + D Sbjct: 2 FIVVAILAAFCMLISTSSRALRLFNSLALIALLGLAGEMILRVFGQGPQSIWGGFFSWDA 61 Query: 75 LGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNN 134 L L L ++ VI +YS YM HEVA G++ L YY + +F+ TML VV++ N Sbjct: 62 LSALLLGVIVVIAAYVIVYSFSYMEHEVAAGKVPQSRLPRYYFWVWMFIGTMLWVVSTPN 121 Query: 135 LIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVM 194 L ++W IE TTL++A LVG Y Q++++EAAWKYI++CTVG++F L GT+++YA + + Sbjct: 122 LGLLWVGIEGTTLATALLVGFYRQKTAVEAAWKYIVLCTVGISFALLGTMILYAASGRIN 181 Query: 195 PQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVS 254 + A+ W ++ + LDP L+ L +F IG+G K G PMH WLPDAHS+APSPVS Sbjct: 182 GYSLAALDWRLLVGMAPQLDPALVKLGCIFAFIGYGAKVGFVPMHPWLPDAHSQAPSPVS 241 Query: 255 ALLSAVLLNCALLVLIRYYIII-CQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRL 313 ALLS VLLNCAL ++R++I++ +G DF +LLL+FG++S+ FIL+Q+DIKRL Sbjct: 242 ALLSGVLLNCALYAILRWHILVRQTGLGPDFSGKLLLVFGLISLGAMMAFILLQKDIKRL 301 Query: 314 LAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVV 373 LAYSSVE+MG++A+ LG+G PL ++ A H++ H+L K LF G V+ GTR + + Sbjct: 302 LAYSSVEHMGIIALGLGLGTPLAVWGACFHLILHALTKANLFVVVGRVVQMMGTRQIPKI 361 Query: 374 CGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVL 433 G++ + P+T + G LA+ GMPPF F SE + +H ++ L L L ++ Sbjct: 362 RGVMSLWPYTGGILFMGLLAITGMPPFGTFRSEISIMAGFFQNHHPILGFLTALFLAVIF 421 Query: 434 AGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTI 493 AG + +L P + + + + ++++L +G +P+P+ + L + Sbjct: 422 AGFLYHFLGMLFGTPGERCLKDKGEGKEVLWLAVPMILVLMLGVFVPEPLNQALNQVVEL 481 Query: 494 VLSGTHDLPAQRST 507 +L + Sbjct: 482 ILGRGGEYGEFGKL 495 >UniRef50_Q609T5 Hydrogenase subunit n=1 Tax=Methylococcus capsulatus RepID=Q609T5_METCA Length = 748 Score = 336 bits (863), Expect = 1e-90, Method: Composition-based stats. Identities = 152/523 (29%), Positives = 246/523 (47%), Gaps = 45/523 (8%) Query: 26 KRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGV 85 +R + A T + + SLG LL + A V G + + +D L FL +LG+ Sbjct: 105 RRMVFALLTASGVSSLGAGLLQLHADAAVSGQLPFG-LPWLHWHVRLDTLSAFFLVVLGL 163 Query: 86 IGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEAT 145 G+Y GY R + L F F+ M V+ +++ + A EA Sbjct: 164 GVIAAGVYGPGYTRQFAGQYSFGALGL-----FTGSFVAGMEGVLIADDAYLFVIAWEAM 218 Query: 146 TLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWS 204 T+SS FLV + +S AA+ Y+++ VG + ++ A + S A Sbjct: 219 TVSSYFLVVYQHEHASHRRAAFLYLLMGEVGAIAIILAFGILAAASHSFAFDAW------ 272 Query: 205 EVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNC 264 + + + P AF+ L GFG K GL P+HAWLP+AH AP+ VS L+S V+L Sbjct: 273 ----RDAHVTPAWGTAAFLLALAGFGMKAGLVPLHAWLPEAHPAAPAHVSGLMSGVMLKI 328 Query: 265 ALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGL 324 A+ L+R+ + + + ++L G S A+ + +VQ D+KRLLAYSS+ENMG+ Sbjct: 329 AVYGLLRFAFDLLGDVQW-YWGAIVLGLGTGSAALGILYAVVQSDLKRLLAYSSIENMGI 387 Query: 325 VAVELGI-----------GGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVV 373 V + LG+ G +G+ AAL H+LNHSL K LLF +G+V+ + DL + Sbjct: 388 VFMGLGLCMVFIGKGHVQLGLIGLVAALYHVLNHSLFKNLLFLAAGSVVHQTHRHDLEHM 447 Query: 374 CGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL-----------II 422 G++K MP TA LF G++A+AG+PP N F+SE++T A L ++ Sbjct: 448 GGLIKRMPVTAGLFLAGSVAIAGLPPLNGFVSEWLTFQAALQAASVIDNGILRSMVSVAA 507 Query: 423 VLLLLLLTLVLAGLVRMAARVLMAKPPQA--VNRGDLGWL-TTSPMVILLVMMLAMGTHI 479 +L + A V++ + +P + + ++ +L + L +G + Sbjct: 508 AILAFTAAVAAACFVKLYGVAFLGQPRERRSAHAHEVSHSGMLWAPAMLAGLCLLLGV-L 566 Query: 480 PQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEK 522 P V+ + + +L T + R W P G ++ S Sbjct: 567 PTWVLDAMRPITRQLLGETLTSASARG-WLWLTPGGVSTASYS 608 >UniRef50_C5C4D6 NADH dehydrogenase (Quinone) n=2 Tax=Micrococcineae RepID=C5C4D6_BEUC1 Length = 999 Score = 336 bits (863), Expect = 1e-90, Method: Composition-based stats. Identities = 121/517 (23%), Positives = 209/517 (40%), Gaps = 32/517 (6%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 + + L L+ +L +R + + ++ + Sbjct: 1 MLQLLTVHLAVALVGPVLVRLWGRRMFAVLALAPLSATVWALAQTPAVMAGDAPVVTTSW 60 Query: 63 IFAAGL--WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 + A G+ +D LG + I+G +G L +Y Y L + G F Sbjct: 61 VPALGIDLSFRLDVLGWFMVLIVGGVGALVLLYCAWYFA-------SGASNLPRFAGVFV 113 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFG 179 F ML +VT++N ++A E TT+ S L+G Y R S AA + II+ T G Sbjct: 114 AFAGAMLGLVTTDNTFALYAFWELTTVFSYLLIGHYFDRKVSRRAAMQAIIVTTFGGLVM 173 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L G V++ +S +S + L+ +A V +L+G +K+ L P H Sbjct: 174 LAGLVMLGELPGG---------SYSLTELVASAPESPLLPIAIVCVLVGAVSKSALVPFH 224 Query: 240 AWLPDAHSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 WLP A + AP+PVSA L A ++ + ++ R LL+ ++ Sbjct: 225 FWLPSAMA-APTPVSAYLHAAAMVKAGVYLVARLAPGYSTLPA---WQWTLLVLASATMI 280 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 + + L Q D+K LLAY +V +G + + +G A L + H++ K LF Sbjct: 281 LGGYRALRQHDLKLLLAYGTVSQLGFLILLVGQPSRAVALAGLALLGAHAMFKAALFLSV 340 Query: 359 GNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH 418 G V GTRDL + G+++ PF AV+ G ++ G+PPF ++++ + + Sbjct: 341 GIVDAAAGTRDLRQLSGLVRTQPFLAVVAGLATASMIGLPPFAGYVAKEAALEGFVHDGD 400 Query: 419 L---LIIVLLLLLLTLVLAGLVRMAARVLMAKPP-QAVNRGDLGWLTTSPMVILLVMMLA 474 +++ +++L L +A +R K W + +L V LA Sbjct: 401 PTSIMLLAVVVLGSILTVAYGLRFWWGAFGIKKDLADTEVDREAWPMFAAPTVLAVAGLA 460 Query: 475 MGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDF 511 G +P R+L + +G P + W F Sbjct: 461 AGL-VPALGERLLEPFADTYPTGD---PGHLTLWGGF 493 >UniRef50_B1VI36 pH adaptation potassium efflux system transmembrane protein n=5 Tax=Actinomycetales RepID=B1VI36_CORU7 Length = 1123 Score = 336 bits (862), Expect = 1e-90, Method: Composition-based stats. Identities = 105/480 (21%), Positives = 197/480 (41%), Gaps = 29/480 (6%) Query: 46 LLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHG 105 + T+A E L +D L F + +IG + IYS Y+ Sbjct: 59 SATWIEGALPTSAAHPEGGDITFGLTMDALSLFFTLLALLIGAVVFIYSTRYLH------ 112 Query: 106 ELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAA 165 + +Y F+ +LL+V ++++ +++ E +L+S FL+ G S A Sbjct: 113 --PGEKILSFYLLMTAFMLAVLLLVLASDVALLFIGWELVSLASFFLIARSGS-SGEAGA 169 Query: 166 WKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFL 225 + +I+ VG F + ++ S +A S + L + + + Sbjct: 170 TRTLILTFVGGLFLIAALGIMVGVTGSTQLADILA-------DPSWGNNTVLTGVTAMLI 222 Query: 226 LIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDF 284 + +K P H WLP+A + A +PVSA L A ++ + +L+R+ I G+ Sbjct: 223 AMAGFSKAAQIPFHFWLPEAMA-ADTPVSAFLHAAAVVKAGVYLLLRFSGIF---AGTVI 278 Query: 285 PNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHI 344 + +L+I GM++ +AA + + + D+K+L AYS+V +G + +G+G P I AA++H Sbjct: 279 WHYVLIITGMVTALMAALYAMQKTDLKKLTAYSTVSQLGWIVATIGVGTPFAITAAIVHT 338 Query: 345 LNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 H+L K+ LF G V + G+RD + + + MPFT A ++A +PP F+ Sbjct: 339 AAHALFKSSLFMLVGVVDHQAGSRDTRRLGSLWRRMPFTFWSAVVAAGSMAAIPPTLGFV 398 Query: 405 SEFMTITA-----GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGW 459 S+ +TA +++ + + R + + Sbjct: 399 SKEGMLTAFQEAPFSQAGVWVLLAVAGVGALATFMYSARYVFGAFVDGKTDESETREAPV 458 Query: 460 LTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASV 519 P + ++ L + P + A + +G + + WH SV Sbjct: 459 SLWLPAALPGLLSLPAVFFLAWPESWLDNIA---LATGVGEAHTHLAMWHGINAPLVISV 515 >UniRef50_A9B6Y1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B6Y1_HERA2 Length = 517 Score = 336 bits (862), Expect = 1e-90, Method: Composition-based stats. Identities = 103/491 (20%), Positives = 197/491 (40%), Gaps = 29/491 (5%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL------WVVQTAA 58 + +L++ P + +++ R +R +A +L + L + +Q Sbjct: 10 TILSLVVFLPAVGAIILAFMRGQRGAARIFALGWSTLVFAVSLPILFNFKHDAAGLQFYE 69 Query: 59 DAGEIFAAGL--WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 I G+ L +DG+ + + + L + ++ Sbjct: 70 YFNWIPDWGVRYELGLDGISLWLVLLTTFVTPLAIWSAW-----------NVEEKTNNFL 118 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGV 176 L ML V + +L + + E T + FL+G++G + + A K+ + Sbjct: 119 MLILLQEMGMLGVFLAQDLFLFYIFWEFTLIPMYFLIGMWGGKRRIYATVKFFLYTFAAS 178 Query: 177 AFGLFGTVLV------YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 F L G + + Y + + L T + L F+ + F Sbjct: 179 VFMLIGIIALGLLNYKYLAQQGLPTDTAFQVQTLMANINQFGLSDTELKLLFLSFFVAFA 238 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K L+P+H WLPDAH EAP+ S +L+AVLL +IR+ + + I ++ + Sbjct: 239 VKVPLWPVHTWLPDAHVEAPTAGSVILAAVLLKMGGYGMIRFCVQLFPQIAQEWARP-IA 297 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 + ++ + A Q DIK+L+AYSSV +MG + + + +G+ A+L ++NH L+ Sbjct: 298 LLAVIGIIYGAVLSYAQSDIKKLVAYSSVSHMGFIVLGIFALNEVGLQGAVLQMINHGLS 357 Query: 351 KTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 LF G V + TR+L G+ K++P +A G+P N F+ EF+ + Sbjct: 358 TGALFLLIGMVYERTHTRELADYGGLWKVVPVFVYFLLFATMASVGLPGLNGFVGEFLIM 417 Query: 411 TAGLARN-HLLIIVLLLLLLTLVLAGLVRMAARVLMAK--PPQAVNRGDLGWLTTSPMVI 467 + + L L++M + + + DL + ++ Sbjct: 418 LGAFDSPIGWTFTAFAAVGVILAAVYLLKMFQGIASGPFSERRTPHLSDLTRREVAILLP 477 Query: 468 LLVMMLAMGTH 478 L ++ML +G + Sbjct: 478 LCILMLVIGLY 488 >UniRef50_D0LWA1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LWA1_HALO1 Length = 827 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 123/529 (23%), Positives = 217/529 (41%), Gaps = 32/529 (6%) Query: 11 LLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLL------------ILALWVVQTAA 58 ++ +L + + L L + + Sbjct: 5 IMVLFAGALWAPLVNRLSARFAGWLCALAPLALLAWFLRETGRLSASVDASGQPQPREWL 64 Query: 59 DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 + + +DGL LF ++ IG L IY+ GY+ G ++ Sbjct: 65 ETLFWLPDAVAFRLDGLALLFAVLITGIGALVLIYAGGYLGEHPRRGT--------FFAS 116 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYIIICTVGVA 177 LF+ ML +V S++ I ++ E T+++S L+G + + AA K ++I G Sbjct: 117 LFLFMAAMLGIVVSDDAIALFVFWELTSVASFLLIGFEDQRPEARVAARKALLITGAGGM 176 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L G VL+ A + + A S + + L + L A + +L+G TK+ P Sbjct: 177 ALLVGLVLLAHAAMDLGLSSADATRISRLSEV-PLREHPLYTPALLLVLLGAFTKSAQVP 235 Query: 238 MHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 H WLP A + AP+PVSA L A ++ + +L R + G+ L+ G+L+ Sbjct: 236 FHIWLPAAMA-APTPVSAYLHSATMVKAGVFLLARLSPALG---GTLLWQGSLITAGVLT 291 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + VA + + QRD+KR+LAYS+V +G++ + LGIG + AA++ ++ H+L K LF Sbjct: 292 MLVAGYLAVRQRDLKRILAYSTVAVLGILVMLLGIGDRHAVEAAIVFLVAHALYKAALFM 351 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL-- 414 +GN+ GTRD+ + G+ + MP T AL+ AG PP FL + + + L Sbjct: 352 VAGNIDHGTGTRDVGRLGGLRRAMPLTCAAALLAALSKAGAPPMFGFLGKELLYGSRLTR 411 Query: 415 -ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMML 473 + LLI + + +TLV A + ++ ++ +L + Sbjct: 412 DDLSALLIAAAVAVNITLVAAAFLVGVRPFFGSRRETPHAPHEMPPSMWLGPALLAAGGI 471 Query: 474 AMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEK 522 G + + A + + + WH P + Sbjct: 472 FAGLVPGPFAHTLGSSAVAAITGQPARVE--LALWHGVNPEALLILGLS 518 >UniRef50_B9LUW7 NADH/Ubiquinone/plastoquinone (Complex I) n=13 Tax=cellular organisms RepID=B9LUW7_HALLT Length = 698 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 116/476 (24%), Positives = 194/476 (40%), Gaps = 35/476 (7%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA---ADAGEI 63 L +L + + A + V ++ + V+ A G Sbjct: 11 PLLAVLVSFVAAFFIVASYRSPNVREGWTIVAAVAKFAIVASMLPAVLDGAVFEWSLGAF 70 Query: 64 FAAGLWL--HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 G+ D LG LF + + +T YSIGYMR V Y+ F + Sbjct: 71 LPGGIEFVLRADALGMLFAFLASGLWIVTSFYSIGYMRGNDE------VNQTRYFAAFAV 124 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGV-AFGL 180 L + + + NL+ ++ E ++++ LV + A KY+ G L Sbjct: 125 SLSATMGIAFAGNLVTIFVFYELLSIATYPLVAHDETDEARAAGRKYLAYTMFGGGVLVL 184 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 GT LVY A +V A +++ + DP L +LAF L IGFG K G+ P+H Sbjct: 185 AGTALVYLIAGNVSFTA-------GGIEELANADPGLAMLAFFLLAIGFGVKAGIMPLHQ 237 Query: 241 WLPDAHSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQA--------IGSDFPNRLLLI 291 WLP+A AP+PVS LL AV ++ + R + + +L Sbjct: 238 WLPEAMV-APTPVSGLLHAVAVVKSGAFGVSRVVLDVFGPELVFDLSLPFGFSAGLVLST 296 Query: 292 FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAK 351 G +++ A+ L + +K+ LAYS+V + + + LG+ G G+ ALLHI H+ K Sbjct: 297 IGAITLTAASIIALRKDHLKQRLAYSTVSQLSYIILGLGLFGWYGLVGALLHIPAHAFMK 356 Query: 352 TLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 LF +GN+ + T ++ + G+ K MP T F +L +AG+P F+S++ + Sbjct: 357 LTLFFCAGNLHVSTHTDYISEMAGIGKRMPLTMGAFTVASLGMAGIPLLAGFVSKYYMLI 416 Query: 412 AGLARN------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLT 461 G+ ++ LLL L +A + + + + Sbjct: 417 GGIRMGAQLTPVAYYLVGALLLSGVLNIAYFWPVIYTAFFEAEDAHDAKPLVDFRM 472 >UniRef50_D1C6X8 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6X8_SPHTD Length = 527 Score = 335 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 120/538 (22%), Positives = 213/538 (39%), Gaps = 58/538 (10%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M + + L PL+ + + F K A R V + SL L ++ L T+A Sbjct: 1 MDGFPILSALTYVPLVGAAIIFFWPKASPQAARWVALGASLVSLALSLVMLAGFDTSASG 60 Query: 61 GEI---------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 + +DG+ L + + ++ + + S ++H Sbjct: 61 MQFVERFEWLPALGVSYHFGVDGISVLLIVLSTLLTTIGIVASWSSIQH----------R 110 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIII 171 + +Y + ML V S +L + + E + A L+G++G + + AA K+ + Sbjct: 111 VREYMITMLMLETGMLGVFVSLDLFLFYIFWEVMLIPMALLIGVWGSANRVYAAVKFFLY 170 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 G L G + +Y + + + Q T + F I F Sbjct: 171 TLAGSLLMLVGIIALYQSY----FEQTGIRTLDVLQLQQGNYGYTFQMWVFAAFFIAFAI 226 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLI 291 K ++P H WLPDAH EAP+ S LL+ VLL L+R+ + + D+ ++++ Sbjct: 227 KVPMWPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFNLPLFPDAARDWA-PVIIV 285 Query: 292 FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAK 351 ++ + A LVQ D+K+L+AYSSV +MG V + + G++ A++ +L+H L Sbjct: 286 LSVIGIIYGALVALVQPDLKKLVAYSSVSHMGFVTLGIFAFNAQGLYGAMIVMLSHGLVT 345 Query: 352 TLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 + LF G + + TR ++ G+ MP A G A G+P + F+ EF++I Sbjct: 346 SALFLCVGVIYDRGHTRLISRFGGLATNMPVYASFLGLFTFASLGLPGLSGFVGEFLSIL 405 Query: 412 AGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLM----AKPPQAVNR------------- 454 V+ L++ ++ M RV +PP A + Sbjct: 406 GAFRAER-AAGVIAFLVVIFSAWYMLWMYQRVAWQRAPGEPPDANDPEAKLAGDEPRPVM 464 Query: 455 ---------------GDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSG 497 D+ W + L V+ + MG + PQ + L A +V Sbjct: 465 GGAEHGGDVVDPRTFRDVTWREAMTLAPLAVLTIWMGVY-PQWFMNFLRTALELVAKP 521 >UniRef50_C6CN10 NADH/Ubiquinone/plastoquinone (Complex I) n=15 Tax=Gammaproteobacteria RepID=C6CN10_DICZE Length = 679 Score = 335 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 132/533 (24%), Positives = 233/533 (43%), Gaps = 46/533 (8%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAA------DA 60 L L L +L C +R A R + G ++ A V+ D Sbjct: 14 LGLSLALYLAGALFSLLCCRRESLAIRLSGLCALAGGCAGVLAAAPVLLGGGALTAIFDG 73 Query: 61 GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 A L L D L ++ ++ ++ +YS+ Y+ G + F + Sbjct: 74 PFDAFAHLTLRFDTLAAFMTLVISLLVTVSALYSLAYLEEYRGRGAWAMG------FFMN 127 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL 180 LF+ +M+ +V +N E +LSS FLV ++ A Y +I G + Sbjct: 128 LFVASMVALVVVDNAFYFIVLFEVMSLSSYFLVIADQDDEAVSAGLLYFLIAHAGSVLIM 187 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 L+Y ++AS+ + + L + F+ GFG K G+ P+H Sbjct: 188 AAFFLLYRHSASLDFADF----------RHASLSAPQASVVFLLAFFGFGAKAGMLPLHG 237 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 WLP AH APS SAL+S V++ + +I+ I + A + + ++L FG +S + Sbjct: 238 WLPRAHPAAPSHASALMSGVMVKIGVFGIIKVGIDLLGATET-WWGVVVLAFGAVSSVLG 296 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSL 349 + L + DIKRLLAY +VEN+G++ + +G+G LG+ L H+LNH++ Sbjct: 297 VLYALAEHDIKRLLAYHTVENIGIILMGVGVGMIGIATHHPLLALLGLLGGLYHLLNHAV 356 Query: 350 AKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 K LLF G+G V+ + T+D+ + G+ ++MP TA+ F G +A++ +PP N F+SE+ T Sbjct: 357 FKGLLFLGAGAVIYRVHTKDMEKMGGLARLMPRTALAFLVGCMAISALPPLNGFVSEWFT 416 Query: 410 ITAGLARNH----------LLIIVLLLLLLTLVLAGLVRMAARVLMAKPP--QAVNRGDL 457 + +H + IV+L + L V++ P +A + ++ Sbjct: 417 YQSLFTLSHDGGIGLRLAAPIAIVMLAITGALAAMCFVKVYGISFCGAPRSEKATHAREV 476 Query: 458 GWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHD 510 W T M++L ++ + +G I A+ + + + + Sbjct: 477 PWPMTVAMLLLALLCVLLGIGASVVSPIITRIAADLAQTPAVAMAQGLGVFPG 529 >UniRef50_Q2S1W7 NADH dehydrogenase, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S1W7_SALRD Length = 794 Score = 335 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 113/519 (21%), Positives = 221/519 (42%), Gaps = 32/519 (6%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTV------TVLHSLGITLLLILALWVVQTAA 58 + + + + +L + AT V + +L + + A ++ + Sbjct: 1 MAILFAVFSGFVLALASPWLTQLTGRATGWVYGLLPAAITGTLATLVGRVAAGETLRVSY 60 Query: 59 DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 L ++DGL F ++ IG L +Y+ GY++ L ++ + Sbjct: 61 TWVPGLDVNLSFYVDGLSLFFALLITGIGTLIYVYAGGYLKGHHH--------LGRFFSY 112 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVA 177 +F+ M+ +V ++NLI + E T+ +S L+G S AAW+ +++ G Sbjct: 113 LSMFMAAMVGLVLADNLITFYIFFELTSFASFVLIGFNHDEAPSRRAAWQALLVTKAGGL 172 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L G +L+ + A + + + L + +L G TK+ FP Sbjct: 173 ALLVGFILMQQATGTFQISAILE-------SGDVIRQHSFYLPIVLLVLAGAFTKSAQFP 225 Query: 238 MHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 + WLP+A EAP+PVSA L A ++ + V+ R++ ++ G+D ++ G L+ Sbjct: 226 FYFWLPNAM-EAPTPVSAYLHSATMVKAGIYVMARFHPVL---SGTDLWMWIVGGIGALT 281 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + ++A+ L D+K +LAY+++ +GL+ + LG+G + + A ++ IL H+ K LF Sbjct: 282 MVLSAWLALQYTDMKAILAYTTIMALGLLTMLLGLGTEVAVEACMVFILVHAFYKAALFM 341 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG--L 414 +G + + RD+ + G+ MP T AL++AG+PPF F+ + + A Sbjct: 342 VAGAIDHEVHVRDITKLRGLWNRMPVTGAAAVLAALSMAGIPPFFGFVGKELIYKAATHF 401 Query: 415 ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK-PPQAVNRGDLGWLTTSPMVILLVMML 473 + + V +L ++A + R + + V+L V + Sbjct: 402 DPAAVAVTVASVLANVALVASAGLLVIRPFSGEVNDVTEHAHRPAAGLWFGPVVLAVFSV 461 Query: 474 AMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFL 512 +G L ++ VL + + + WH F Sbjct: 462 GLGLAPWLLDAAFLGPSAGAVLGAS--IAPHLALWHGFT 498 >UniRef50_Q9RVZ0 NADH-ubiquinone/plastoquinone subunit, putative n=1 Tax=Deinococcus radiodurans RepID=Q9RVZ0_DEIRA Length = 814 Score = 335 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 125/526 (23%), Positives = 215/526 (40%), Gaps = 44/526 (8%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGIT-----LLLILALWVVQTAADAGE 62 L +L P L + +C + T L L + A V Sbjct: 2 TLAVLFPFLMAAVCALLGPQLGRRTGYFAAAGFLPALALIPRLFALPAAAPVSEVTRWVP 61 Query: 63 IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 L DG LF A++GVIG L +YS+ Y+ + +Y + F Sbjct: 62 ELGLNLVFRGDGFSLLFAALIGVIGTLATLYSVAYLS--------AGEKFGRFYPYLLCF 113 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVGVAFGLF 181 +ML +V S+NL+ ++ E T+++S L+G++ RS+ A K +I +G L Sbjct: 114 GGSMLGLVLSDNLVALFGFWEMTSVTSFLLIGLWHTRSAARDGAVKAFLISALGGLGLLA 173 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 ++ S ++ L + A + L+ TK+ P H W Sbjct: 174 AAAMLSIAGGSPNLSQL---------DLGAVRASPLFVPALLCTLLAAFTKSAQLPFHIW 224 Query: 242 LPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 LP A EAP+P+SA L A ++ ++++ ++ +I S + + + G+L++ Sbjct: 225 LPTAM-EAPTPISAFLHSATMVKAGVVLVAKFGLIFGT---SALWSGITVPLGLLTMVWG 280 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 ++ L Q D+K LLAYS+V +GL+ G+ G FAA H+LNH+ K LF G Sbjct: 281 SWLALRQTDLKALLAYSTVSQLGLLMSLYGLADAGGRFAATAHLLNHAAFKAALFFVVGI 340 Query: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 + + GTR + + + + MP T V+ AL++AG+PP F+S+ + L Sbjct: 341 IDHETGTRQIPYLQNLRRQMPVTFVIALLAALSMAGLPPLGGFVSKELFYENMLRAGPGF 400 Query: 421 IIVLLLLLLTLVLAGLVRMAARVL------------MAKPPQAVNRGDLGWLTTSPMVIL 468 I + +L L LA R+ + + + + + T P +L Sbjct: 401 I-AVAVLGSALTLAYSARLLSIFFAPRSGLTPTRRELRQDALKAHVHEAPLGLTLPAGLL 459 Query: 469 LVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPS 514 L G +L + L+ + + WH P+ Sbjct: 460 AGTALLFGLWPHTA--EVLTRTAEAALN-FGAVREHLALWHGVTPA 502 >UniRef50_Q1QZ48 NADH dehydrogenase (Quinone) n=15 Tax=cellular organisms RepID=Q1QZ48_CHRSD Length = 932 Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 135/512 (26%), Positives = 236/512 (46%), Gaps = 35/512 (6%) Query: 26 KRRLSATRTVTVLHSLGITLLL-----ILALWVVQTAADAGEIFAAGLWLHIDGLGGLFL 80 RR + + + + L +LA V + A L L +DGL +F+ Sbjct: 23 HRRHQCALLTAAMPLVALLIALREAPGVLAGDVPRLAFSWVPALGLDLALRLDGLSLMFV 82 Query: 81 AILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWA 140 ++ IG L +Y+ Y+ + ++ +Y F LF+ ML +V ++NLI++W Sbjct: 83 LLILGIGLLIILYARHYLS--------TADSMPRFYAFLMLFMAAMLGIVMADNLILLWM 134 Query: 141 AIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEM 199 E T+LSS L+G + + ++ + A + + +G L G +L+ + Q + Sbjct: 135 FWELTSLSSFLLIGFWNHQSAARKGARMALAVTGMGGLALLAGLILIGQIVGTFDMQTVL 194 Query: 200 AIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS- 258 + +LD L A + +L+G TK+ FP WLP A + AP+PVSA L Sbjct: 195 D-------SRDVILDDPRYLPALLLILLGAFTKSAQFPFQFWLPQAMA-APTPVSAFLHS 246 Query: 259 AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSS 318 A ++ + +L R + + GS L+ + G++++ A+F L++ D+K +LAYS+ Sbjct: 247 ATMVKAGVFLLARLHPAL---AGSQEWLYLVSLTGLVTMLYGAYFALIKLDLKAILAYST 303 Query: 319 VENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLK 378 V ++GL+ + G+ + + A L HILNH+ K LF +G V + GTRD+ + G+ + Sbjct: 304 VSHLGLITMLFGLDSRMAVVAGLFHILNHATFKAALFMTAGIVDHECGTRDIRKLKGLWR 363 Query: 379 IMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN-----HLLIIVLLLLLLTLVL 433 MP T L A ++AG+P FN FLS+ M + L LI L + L Sbjct: 364 YMPMTTALAAITAASMAGVPLFNGFLSKEMMLAETLGTPLLGGLAWLIPTLATVGSILAA 423 Query: 434 AGLVRMAARVLM-AKPPQAVN-RGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGAS 491 + +R KP + + + P++IL ++ + +G +P L A+ Sbjct: 424 SYSLRYVRNTFFDGKPRELEKTPHEAPFPMRLPILILAIICVVVGI-LPALTTTDLLTAA 482 Query: 492 TIVLSGTHDLPAQRSTWHDF-LPSGTASVSEK 522 S WH F LP ++++ Sbjct: 483 ADAALVGAAPELHLSIWHGFNLPLLMSAIALA 514 >UniRef50_A1RWL8 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL8_THEPD Length = 737 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 143/456 (31%), Positives = 218/456 (47%), Gaps = 43/456 (9%) Query: 68 LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTML 127 L++D L L ++ + + I+SIGY E+ GE S L +Y LF+ +M+ Sbjct: 83 FALYVDKLSAFLLLVISFVALYSSIFSIGY--SEMYAGEYSISYLTFFYA---LFVLSMV 137 Query: 128 LVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLV 186 LVVT+N+ + + + E TLSS LVG + S +AA Y II G A L L+ Sbjct: 138 LVVTANDALSFYLSWELMTLSSYMLVGYEHRSEESRDAAKTYFIIAHAGGACILLSYALL 197 Query: 187 YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAH 246 Y S+ A + + P + L F+ L+GFG+K G+ P+HAWLP AH Sbjct: 198 YFIKGSLSFDAF----------REGGVPPGIASLIFLLALVGFGSKAGIVPLHAWLPQAH 247 Query: 247 SEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD--FPNRLLLIFGMLSVAVAAFFI 304 APS VSALLS V+L A+ LIR + G + ++I S + F Sbjct: 248 PAAPSNVSALLSGVMLKVAVYGLIRVVFDFLKPSGVEGGLWGCAVMIIAAFSTIIGVQFA 307 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFA-----------ALLHILNHSLAKTL 353 +VQ D+KRLLAY S+EN+G++ + +G L AL H+LNH++ K+L Sbjct: 308 VVQHDLKRLLAYHSIENIGIILLGVGASLILYSEGLKDVAALALTAALYHLLNHAVFKSL 367 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 LF GSG+VL TR+ ++ G+ K +P+T+V F A+A+AG+PP N F SE++T + Sbjct: 368 LFLGSGSVLKSCRTRNFELLGGLSKYLPWTSVTFLIAAMAIAGVPPLNGFASEWLTYQSL 427 Query: 414 LAR-------------NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWL 460 LA L ++L L L + ++ + + +G Sbjct: 428 LAVVKEAAGKAPWVSLAALFSALMLGLAGALAVLCFTKVYGVTFLGPLGRVKPKGGESLT 487 Query: 461 TTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLS 496 M I + +G +P V + AS + Sbjct: 488 MKIGMAIPAAACIVLGVAMPY-VAVFVDKASRQITG 522 >UniRef50_Q02CT2 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02CT2_SOLUE Length = 518 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 106/503 (21%), Positives = 206/503 (40%), Gaps = 25/503 (4%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTV-----TVLHSLGITLLLILALWVVQ 55 M+ + L L L +L + S + SLG+ L Q Sbjct: 1 MNLLTLVLFLPLAGFLVALAIPRSVSAQGSRMWALLCSLGIFAASLGLLAWFDRGLSGEQ 60 Query: 56 TAADAGEIFAAGLWLHI--DGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLC 113 A D I + + I +G+ + + ++ L + S + Sbjct: 61 FAIDVPWISSPNIHFAISANGVSIWLVLLSTLLTPLCVLVSWNSIHD----------RTK 110 Query: 114 DYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICT 173 ++Y F L F ++ V + +L + + E + F++GI+G + AA K+ + Sbjct: 111 EFYAFLLLLEFGLVGVFLAQDLFLFYVFWEIALVPMYFMIGIWGHDRRIYAAVKFFLYTM 170 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 G L + +Y + A + + + L P +L F+ + F K Sbjct: 171 AGSVLMLAAIIYIYNKTQTFSYPAILEMLSNGRLS----FPPGEQMLLFLAFFLAFAIKV 226 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFG 293 LFP+H WLPDAH EAP+ S +L++V+L ++ + + + + + + Sbjct: 227 PLFPLHTWLPDAHVEAPTAGSIMLASVMLKMGTYGILHFCLPMFPSAARACA-PWITVLA 285 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 ++ + A +VQ ++K+L+AYSSV ++G V + + G+ A+ +LNH ++ Sbjct: 286 IIGIIYGALVAMVQPNMKKLVAYSSVSHLGFVVLGIFTFTQPGLDGAVYQMLNHGISTGA 345 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 LF G + + + ++N G+ + P+ +V F LA G+P N F+ EF+ + Sbjct: 346 LFLVVGLLYERNHSLEINSYGGVATVAPWLSVAFLITTLASVGLPTLNNFVGEFLVLQGA 405 Query: 414 LARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK--PPQAVNRGDLGWLTTSPMVILLVM 471 N + + + L ++ M RV + P + DL + ++ L+ M Sbjct: 406 AIANFPWAVW-ASIGVILSACYMLWMYQRVFYGEVNPHVREHTPDLNLREWAAILPLIAM 464 Query: 472 MLAMGTHIPQPVIRILAGASTIV 494 M+ MG + + + I+ Sbjct: 465 MVWMGVFSQSFLPPVSQNTARIL 487 >UniRef50_B6J444 Sodium/proton antiporter protein n=5 Tax=Coxiella burnetii RepID=B6J444_COXB2 Length = 768 Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats. Identities = 119/525 (22%), Positives = 230/525 (43%), Gaps = 32/525 (6%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLI------LALWVVQTAA 58 ++ ++++T L+ +L+ + L + + I + + + Sbjct: 1 MLTGIVIITLLVSALVPIVVHYLKGPRLGWGLALIPFLLFIYFIHLIPTIMHGGTIYSGF 60 Query: 59 DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 ++DGL LF ++ IG IYS Y+ + L YYG+ Sbjct: 61 RWFPDLNINFSFYVDGLSLLFGLLITGIGIPIVIYSAPYLENHPH--------LTRYYGY 112 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVA 177 LF+ +ML +V +NNLIV++ E T++SS L+G+ +R + +AA + + + +G Sbjct: 113 LFLFMASMLGLVLANNLIVLFVFWELTSISSFLLIGLEHERPAARKAAVQALFVTVIGGL 172 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L +L+ + ++ + + L + L + + +LIG TK+ FP Sbjct: 173 SLLASFILIGIVTHTYSVAQLLS-------QGNLLQNQPLFVPILLLMLIGAFTKSAQFP 225 Query: 238 MHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 H WLP+A EAP+PVSA L A ++ + +L R++ ++ + +L G ++ Sbjct: 226 FHFWLPNAM-EAPTPVSAYLHSATMVQVGIYLLARFHPLMSHNY---WWFVILTTIGGIT 281 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + + Q D+K +LAY+++ +G + LG L I AA+ +L H+L K LF Sbjct: 282 MLAGVLLAVRQTDMKLILAYTTITALGSLVFLLGSTHDLIIKAAVAFLLAHALYKATLFM 341 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 G++ + GTRD+ V G+ K MP T + ++AG+PP F + + A L Sbjct: 342 AVGDIKHQTGTRDIGKVRGLHKAMPITFMAVLVAGASMAGLPPLLGFYVKELVYGASLVA 401 Query: 417 NHL--LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLA 474 ++ ++ + ++ + R + + + + ++L + L Sbjct: 402 PLASHILTIIAVFSNMIMAMLAFLLVLRPFWGE-QKPKRVREANVNMSVNALLLASLTLL 460 Query: 475 MGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASV 519 + +L+ A + +L L + + WH F PS S+ Sbjct: 461 LSIFPFVINHTVLSPAVSAIL--RRPLKTKLTLWHGFTPSLVLSL 503 >UniRef50_B0BZT1 Proton-translocating NAD(P)H-quinone oxidoreductase, chain M n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0BZT1_ACAM1 Length = 490 Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats. Identities = 110/503 (21%), Positives = 207/503 (41%), Gaps = 31/503 (6%) Query: 4 SVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI 63 S + +L++ +PL+ +++ K + S + +++ + + ++ L A ++ Sbjct: 3 SHLLSLIIFSPLVGAVIILLLPKAQESLYKWISLANMVVVSALTFAAFLQFDPNQTGFQL 62 Query: 64 FAAGLW---------LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 LW L DG+ + + +I L I S + Sbjct: 63 VEKTLWIPQLNVYYLLGTDGISFPMVVLTALISTLASIGSFS-----------IKKREKE 111 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTV 174 YY + + M+ + ++I+ + E + FL+GI+G AA K+ + Sbjct: 112 YYCLYLFLVTGMMGTFLALDMILFYVFWEVVLVPMYFLIGIWGGPRKEYAAMKFFLYTFA 171 Query: 175 GVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 G L G + +Y N+ ++ + + + F+ L +GF K Sbjct: 172 GSLLMLVGILGMYFNS--------APHTFNIMELVAQDFSFGFQKIVFLALFVGFAVKVP 223 Query: 235 LFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 FP H WLPDAH EAP+P+S +L+ VLL R+ I + + L + Sbjct: 224 TFPFHTWLPDAHVEAPTPISVILAGVLLKMGTYGFFRFSFPILPEAAN-WFRPYLAVLAA 282 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLL 354 + + F L Q D K+++AYSS+ +MG V + L G A+L + +H + L Sbjct: 283 IGIVYGGFIALAQTDFKKMVAYSSISHMGFVLLGLAAFSTNGFNGAMLQMFSHGVITGAL 342 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 F G + + TRD+N G+ +P + +LA G+P + F+SEF+ + Sbjct: 343 FLLVGVIYDRAHTRDMNAFGGLNAQLPVYSGFLVFFSLASLGLPGLSGFVSEFLVLLGSY 402 Query: 415 ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK-PPQAVNRGDLGWLTTSPMVILLVMML 473 + L + + L L+ M RVL+ P+ + D+ +V LL++ L Sbjct: 403 EYSK-LYTAFACMGILLAACYLLFMVRRVLLGPANPKWESLPDINMREVVTVVPLLIITL 461 Query: 474 AMGTHIPQPVIRILAGASTIVLS 496 +G + + + ++ S Sbjct: 462 GIGIYPRYLLSFFIPTLQDLLAS 484 >UniRef50_D1A433 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Streptosporangineae RepID=D1A433_THECD Length = 698 Score = 334 bits (858), Expect = 4e-90, Method: Composition-based stats. Identities = 118/476 (24%), Positives = 196/476 (41%), Gaps = 44/476 (9%) Query: 24 CRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF------AAGLWLHIDGLGG 77 + + + + + + L++ +A+W L L +DGL Sbjct: 114 LPRNGPALIACLPMAVATVLALIVAVAVWRHPGVRTGTLTLIPTGTIDIALGLRVDGLAA 173 Query: 78 LFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIV 137 L ++ + +YS+ YM + Y F LF MLLVV S +L+V Sbjct: 174 LVALMVCGVALAVQLYSVAYMAED--------RRYSSYAAFISLFTAAMLLVVYSGDLLV 225 Query: 138 MWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQ 196 ++ E + S FL+G + +R++ AA K +I +G L G ++ A + Sbjct: 226 LYVGWEVMGVCSYFLIGHHWQERANSRAAVKAFLITRLGDVGFLIGIFVLGVGAGTFSIG 285 Query: 197 AEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSAL 256 + L + A + LL G K+ FP+H WLPDA + P+PVSAL Sbjct: 286 GVLERLPD--------LPQGTVTAATLLLLAGVAGKSAQFPLHTWLPDAMA-GPTPVSAL 336 Query: 257 LSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLA 315 + A ++ + V+ R Y S +L + ++S+ +A L Q D+KR+LA Sbjct: 337 IHAATMVAAGIYVVARLY---AAFAASAAALTVLGVLAVISMLGSALAALAQDDLKRVLA 393 Query: 316 YSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCG 375 YS++ + +A L +G P+ A+ H++ H K LLF +G+V+ G+ L G Sbjct: 394 YSTISQLACMAAGLAVGAPVA---AIFHLVAHGAFKALLFLAAGSVIFVTGSGLLRRHGG 450 Query: 376 MLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN-------------HLLII 422 + + MP T G AL G+PP + F S+ + A LI Sbjct: 451 LRRAMPVTFWAMTIGYAALVGLPPVSGFFSKDAIVGAAWHAAAHGERPAHLPGGVAWLIC 510 Query: 423 VLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTH 478 + LL + + A R +P A + L T P+ L V +G Sbjct: 511 LALLATVAVTAAYATRAWLMTFFGEPRAAFPAREAPPLMTWPVAALAVPAALLGFF 566 >UniRef50_P05510 NADH-ubiquinone oxidoreductase chain 5 n=1247 Tax=cellular organisms RepID=NU5M_NEUCR Length = 715 Score = 334 bits (858), Expect = 4e-90, Method: Composition-based stats. Identities = 112/589 (19%), Positives = 228/589 (38%), Gaps = 91/589 (15%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG---- 61 M+ +++ PLL S++ ++ + + S+ IT L + + + Sbjct: 1 MYLSIIILPLLGSIVAGFFGRKVGVSGAQLITCLSVIITTGLAILAFFEVGFNNIPVTIN 60 Query: 62 -------EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 E + D L L + +I L IYSI YM H+ + Sbjct: 61 LFRWIDSEWYNILWGFQFDSLTVAMLIPVLIISSLVHIYSISYMSHDPHNQ--------R 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICT 173 ++ + LF F M+++VT+NN ++M+ E + S LV + R ++ +++ + Sbjct: 113 FFSYLSLFTFMMIILVTANNYLLMFVGWEGVGVCSYLLVSFWFTRIAANQSSMSAFLTNR 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKT 233 VG F G +V ++ ++ + ++ + + + LLIG K+ Sbjct: 173 VGDCFLTIGMFVVLWTLGNLDYATVFSL--------APYINSDIATIIGICLLIGAMAKS 224 Query: 234 GLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIF 292 +H WLP A E P+PVSAL+ A ++ + +L+R +I S L L Sbjct: 225 SQVGLHVWLPMAM-EGPTPVSALIHAATMVTAGVYLLMRSSPLIEY---SSTVLLLCLWL 280 Query: 293 GMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKT 352 G ++ ++ L Q+DIK+++AYS++ +G++ + +G+ AL H++NH+ K Sbjct: 281 GAITTVFSSLIGLFQQDIKKVIAYSTMSQLGMMVIAIGLSS---YNVALFHLINHAFYKA 337 Query: 353 LLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 LLF G+G+V+ +D G+ +P T + +L+L P F S+ + Sbjct: 338 LLFLGAGSVIHAVADNQDFRKFGGLKNYLPLTYSVMLIASLSLVAFPYMTGFYSKDFILE 397 Query: 412 AG---LARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVN--------------- 453 + + + + + ++ + V++ +A P ++ Sbjct: 398 SAYGQFSFSGVAVYIIATIGAIFTTLYSVKVLYLTFLANPNGYIHFYRHFILYERLYVYV 457 Query: 454 -------------------------RGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRI-- 486 G+ G+ + P+VIL + + G I + Sbjct: 458 SYTGKEEFYLPKHMSKEINNLPRSVSGEGGFFLSLPLVILALFSIFFGFITKDIFIGLGS 517 Query: 487 ---------LAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEKHSER 526 + I++ +P + ++ SE+ Sbjct: 518 NFFIDNSLFIHPIHEIMIDTEFAVPTLFKLLPFIFTISFSLIALVLSEK 566 >UniRef50_C1YJ06 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit n=4 Tax=Actinomycetales RepID=C1YJ06_NOCDA Length = 968 Score = 334 bits (858), Expect = 5e-90, Method: Composition-based stats. Identities = 119/506 (23%), Positives = 194/506 (38%), Gaps = 28/506 (5%) Query: 24 CRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGL--WLHIDGLGGLFLA 81 + A V + +L + + A L L++D LG + Sbjct: 4 WGRNAFLALAVVPGVSTLWALFQIPAIMRGETLAVSIPWAPEFSLRLGLYMDALGLVMTL 63 Query: 82 ILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAA 141 I +G L IY Y S L + G F F ML +V +++LI ++ Sbjct: 64 IAAGVGALILIYCARYFDD-------SEPGLARFAGVFVAFAGAMLGLVLADDLIQLFVY 116 Query: 142 IEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMA 200 E TT+ S L+G + + S AA + + T G L G +++ A + + +A Sbjct: 117 WELTTVFSYLLIGHSTELKESRRAAMTALTVTTFGGLAMLVGMIMLGETAGTYVISEIVA 176 Query: 201 IFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAV 260 S L+ +A V +++G +K+ L P WLP A AP+PVS L A Sbjct: 177 ----------SPPAGALVNVALVLIMVGAMSKSALLPFSLWLPAAM-RAPTPVSGYLHAA 225 Query: 261 -LLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSV 319 ++ + ++ R L FG L++ +A + L Q D+K +LAY ++ Sbjct: 226 AMVKAGVYLVARLTPAFHDVA---VWKYTALFFGTLTMVLAGWKALRQYDLKLVLAYGTI 282 Query: 320 ENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKI 379 +G + LG G G A + ++ HSL K LF G + GTRDL + G+ Sbjct: 283 SQLGFLITLLGAGTQAGALAGISMLIAHSLFKAPLFLVVGVIDHSTGTRDLRELSGLRSS 342 Query: 380 MPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLL--LLLLTLVLAGLV 437 MP T ++AG+PP F ++ + A I VL ++ T +A + Sbjct: 343 MPVTFWTSVVALASMAGLPPTLGFAAKELAFGAFEHGGGADIAVLAGIVIGSTFTVAYSL 402 Query: 438 RMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSG 497 R K +L + +G + V LA + V Sbjct: 403 RFLWGAFWDKENVPATPLHAPGPLLQAPAAVLAGLGLLGGLLSTLVDPFLAVYADTVPVA 462 Query: 498 THDLPAQRSTWHDF-LPSGTASVSEK 522 D + WH LP ++V Sbjct: 463 EGDYAKHLALWHGLGLPLLLSAVCVA 488 >UniRef50_B3QPF9 NADH dehydrogenase (Quinone) n=1 Tax=Chlorobaculum parvum NCIB 8327 RepID=B3QPF9_CHLP8 Length = 774 Score = 334 bits (857), Expect = 6e-90, Method: Composition-based stats. Identities = 127/526 (24%), Positives = 226/526 (42%), Gaps = 32/526 (6%) Query: 4 SVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA------ 57 ++ L++T S + + + V L + +L V + Sbjct: 3 NLSLLFLIITGFAVSAIAPYLYRLLKARFVWFGVAFPLTLFASFMLKYPQVASGVPVRER 62 Query: 58 ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 L +DGL F+ ++ +IG +Y+ Y+RH ++G Sbjct: 63 WSWVPSLGLNLSFVLDGLSLTFVMLVTLIGAAVFLYASVYLRHYEEAD--------RFFG 114 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEA-AWKYIIICTVGV 176 F +F+ +ML VV ++N+++++ E T++SS L+G + A A K +++ G Sbjct: 115 FIGMFMTSMLGVVLADNMLLLFLFWELTSISSFLLIGFNHHAPTSRASALKALLVTGAGG 174 Query: 177 AFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLF 236 L G +L+ + S + A+ + L +L+G TK+ F Sbjct: 175 LALLAGMLLLGSVTGSFEISSFYAMNDL-------ITSHRLYPAIVALILVGAFTKSAQF 227 Query: 237 PMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGML 295 P H WLPDA + APSPVSA L A ++ + ++ R+ + G+ +L+ G Sbjct: 228 PFHFWLPDAMA-APSPVSAYLHSATMVKAGIYLIARFN---HEIGGTALWQDTILVAGAT 283 Query: 296 SVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLF 355 ++ A Q D+KRLLAYS++ +G + + LGIG L I A ++++ HSL K LF Sbjct: 284 TMIFAGLLSYRQSDLKRLLAYSTLSVLGTLVMLLGIGSKLAIKAFFIYLIAHSLYKGTLF 343 Query: 356 CGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLA 415 +G + + GTRD++ + G+ K MP TAV + ++ G+ P F+ + A L Sbjct: 344 LVAGTLDHETGTRDVSKLGGLWKAMPVTAVTAALASFSMMGVIPLIGFIGKETLYKAVLE 403 Query: 416 RNHL--LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV-NRGDLGWLTTSPMVILLVMM 472 ++IVL + L++ + R + KP + + IL + Sbjct: 404 VQPWGRVLIVLAVAASALLVVVTFLVGFRPFLGKPRPELQKVHEAPVAMLVGPFILALSG 463 Query: 473 LAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTAS 518 L +G V +L ++ ++S D+ WH F S Sbjct: 464 LLLGLFPDFFVGHLLEESAVSIISQRLDIE--IELWHGFNLVLLLS 507 >UniRef50_Q56227 NADH-quinone oxidoreductase subunit 12 n=3 Tax=Thermus RepID=NQO12_THET8 Length = 606 Score = 333 bits (856), Expect = 7e-90, Method: Composition-based stats. Identities = 117/499 (23%), Positives = 212/499 (42%), Gaps = 27/499 (5%) Query: 25 RKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILG 84 ++ R + L LL L A + L +D L G L I+ Sbjct: 22 KRMREPLPGVLASGLVLASFLLGAGLLLSGGARFQAEWLPGIPFSLLLDNLSGFMLLIVT 81 Query: 85 VIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEA 144 +GFL +Y+IGYM + + ++ +F+LF+ ML +V +++ VM+ E Sbjct: 82 GVGFLIHVYAIGYMGGDPGY--------SRFFAYFNLFIAMMLTLVLADSYPVMFIGWEG 133 Query: 145 TTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFW 203 L+S L+G + + ++A K I+ +G + G +++A ++ Sbjct: 134 VGLASFLLIGFWYKNPQYADSARKAFIVNRIGDLGFMLGMAILWALYGTLSISELKEAM- 192 Query: 204 SEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLL 262 + L +P L+ LA + L +G K+ P+ WLPDA + P+PVSAL+ A ++ Sbjct: 193 -----EGPLKNPDLLALAGLLLFLGAVGKSAQIPLMVWLPDAMA-GPTPVSALIHAATMV 246 Query: 263 NCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENM 322 + ++ R + + + + G+L+ A A Q DIK+++AYS++ + Sbjct: 247 TAGVYLIARSSFLYSVLPDVSYA---IAVVGLLTAAYGALSAFGQTDIKKIVAYSTISQL 303 Query: 323 GLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMP 381 G + + G+G + AL H+ H+ K LLF SG+V+ G +D+ + G+ K +P Sbjct: 304 GYMFLAAGVG---AYWVALFHVFTHAFFKALLFLASGSVIHALGGEQDVRKMGGLWKHLP 360 Query: 382 FTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR--NHLLIIVLLLLLLTLVLAGLVRM 439 T GALAL G+P + F S+ + A L + V LL+ L +R Sbjct: 361 QTRWHALIGALALGGLPLLSGFWSKDAILAATLTYPFGGVGFYVGALLVAVLTAMYAMRW 420 Query: 440 AARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMG-THIPQPVIRILAGASTIVLSGT 498 V + + + + + P +L + + G +P P+ +L L+ Sbjct: 421 FVLVFLGEERGHHHPHEAPPVMLWPNHLLALGSVLAGYLALPHPLPNVLEPFLKPALAEV 480 Query: 499 HDLPAQRSTWHDFLPSGTA 517 + A Sbjct: 481 EAHHLSLGAEWGLIALSAA 499 >UniRef50_C0QBF3 HyfB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBF3_DESAH Length = 655 Score = 333 bits (855), Expect = 9e-90, Method: Composition-based stats. Identities = 151/521 (28%), Positives = 235/521 (45%), Gaps = 50/521 (9%) Query: 5 VMFALLLLTPLLFSLLCFACRK--RRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 V+FA ++ L ++ + R +A + S+ I A+ Sbjct: 2 VLFAGAMIVFLAGAVFLPFLGRSKRANTAGALFALAGSVMAMAASIDAITRDGFDLVLPW 61 Query: 63 IFAAG-LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 F G L L +D L G F ++ ++ + IY YM L + + + Sbjct: 62 KFLLGSLHLRMDPLSGFFGLVICLVSGFSAIYGARYMDAYAGKKHLGIA-----WSLYLI 116 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTVGVAFGL 180 +M+LV+T+ N ++ A E ++SS LV QR + +A W Y++ +G A L Sbjct: 117 LTASMMLVITAWNGVLFLIAWEIMSVSSFLLVIFEFQRPGVLKAGWIYLVATHLGTALLL 176 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 +++ N + T L F+ +IGFGTK GL P H Sbjct: 177 VMFMVMGKN--------------NAYDFNLVQASSTGASLVFILAVIGFGTKAGLLPFHV 222 Query: 241 WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA 300 WLP+AH APS VSA++SA ++ + +IR ++I S L+I G ++ Sbjct: 223 WLPEAHPAAPSHVSAVMSAAMIKTGIYGIIRICMLIGPPKAS--WGWTLIIIGAMTGIFG 280 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSL 349 L Q+DIKRLLAYSSVENMG++ + LG+G G LGI +LH+LNH+L Sbjct: 281 VMSALAQQDIKRLLAYSSVENMGIICIGLGLGFLALSTGHPFIGALGISGGMLHVLNHAL 340 Query: 350 AKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 K+LLF G+G+VL TRD+ + G++K MP T F + A+ +PP N F+SEF+ Sbjct: 341 FKSLLFFGAGSVLHSTHTRDMEKMGGLMKSMPVTGTTFVIASAAVCALPPLNGFISEFLI 400 Query: 410 ITAGLAR-----------NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPP--QAVNRGD 456 + +L+IV L L+ L LA + A V P +A + + Sbjct: 401 YFGAFSSLYASKGTFSVLAGILVIVSLALIGGLALACFSKAAGIVFSGHPRSSEARDAHE 460 Query: 457 LGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSG 497 PM++L + L +G P VI V++ Sbjct: 461 SPLAMGIPMIVLAGLCLLVGIFSP-LVIDFFQPVFETVINS 500 >UniRef50_B9L177 Nadh-quinone oxidoreductase chain m n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L177_THERP Length = 524 Score = 333 bits (855), Expect = 9e-90, Method: Composition-based stats. Identities = 116/538 (21%), Positives = 215/538 (39%), Gaps = 59/538 (10%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVV------ 54 M + +L+ +PL+ + + F A R + +L S LL ++ L Sbjct: 1 MDNLPILSLITYSPLVGAAILFLWGGASPRAARWIALLASSVSFLLSVVMLVAFDRDQST 60 Query: 55 -QTAADAGEIFAAGLWLH--IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 Q + G+ +DG+ + + ++ + + S +RH Sbjct: 61 LQFTETFDWLPELGIAYRLGVDGISAPLVGLTTLLTLIAVLASWDPIRH----------R 110 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIII 171 + +YY L ML V S +L + + E + A ++G++G + + AA K+ + Sbjct: 111 VREYYITLLLLATGMLGVFVSLDLFLFYVFWEIVLIPMALIIGVWGSANRVYAAVKFFLY 170 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 G L G V +Y + + F+ + F Sbjct: 171 TLAGSLLMLVGIVAIYQEY----FRQTGIRTLDVLQLAQGQYSEAFQFWTFLAFFLAFAI 226 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLI 291 K ++P H WLPDAH EAP+ S +L+ VLL +R+ + + + +++ Sbjct: 227 KVPMWPFHTWLPDAHVEAPTAGSVILAGVLLKMGGYGFLRFNLPLFPD-ATRMWAPAIVV 285 Query: 292 FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAK 351 ++++ A LVQ+D K+L+AYSSV +MG V + + + G+ A++ +L+H Sbjct: 286 LSVIAILYGALMALVQQDFKKLVAYSSVSHMGFVTLGIFVLNQPGLSGAMVVMLSHGFVT 345 Query: 352 TLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 + LF G + + TRDL G+ + MP A FG LA G+P + F+ EF+ + Sbjct: 346 SALFLIVGVLYERAHTRDLAAFGGLARNMPVFAAFFGLFTLASLGLPGLSGFVGEFLALL 405 Query: 412 AGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP----------------------- 448 G VL +++ L ++R+ RV + + Sbjct: 406 GGFRAYRW-AGVLGTIVVILAAWYMLRVYQRVALVRAPGEPPDPDDPERRLALAHGLPPI 464 Query: 449 ----------PQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLS 496 P DL W ++ L ++ + +G + P P++ +L A +L Sbjct: 465 AGGSDGPHAYPDPRTFPDLTWREAVSLLPLALLTIWIGVY-PLPLLEMLEPALAALLG 521 >UniRef50_P50365 NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Allomyces RepID=NU5M_ALLMA Length = 641 Score = 333 bits (855), Expect = 9e-90, Method: Composition-based stats. Identities = 106/494 (21%), Positives = 201/494 (40%), Gaps = 46/494 (9%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALW---------VVQT 56 M+ ++ PL L ++ + S+ I+ +L L + T Sbjct: 1 MYLTIITLPLFAFLTVGVIGRKLGVRGSQIITSLSIIISAILSLYGFYEIVLLNNLGPIT 60 Query: 57 AADAGEIFAAG----LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 + + G + D + ++ I L +YSIGYM+ + + Sbjct: 61 IYLSPWMNVIGAHADWAFYFDSISITMCVVVSSISSLVHLYSIGYMQGDPH--------I 112 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIII 171 ++ + LF F MLL+VT NN ++M+ E +SS L+ + R + +A+ + +++ Sbjct: 113 QRFFSYLSLFTFFMLLLVTGNNYLLMFVGWEGIGVSSYLLINFWFTRIQANKASMQAMLV 172 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 VG + G ++ S I + LD + + +FLLI Sbjct: 173 NRVGDLGFVLGLFGIFWLFGSSDYDTVGIIAY--------KLDEQYITIVTLFLLIAAIG 224 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ +H WLP A E P+PVSAL+ A L+ + +++R + A S + Sbjct: 225 KSAQLGLHTWLPSAM-EGPTPVSALIHAATLVTAGVYLILRSSPLFELAPTS---LICVC 280 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 + G L+ AA L Q D+KR++AYS+ +G + LG+ A H+ NH+ Sbjct: 281 VIGSLTAIFAATTGLFQNDLKRVIAYSTCSQLGYMVFALGLSQ---YEVAFFHLFNHAYF 337 Query: 351 KTLLFCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 K LLF +G+++ +D+ + G++ I+PFT + G+L+L +P + S+ Sbjct: 338 KALLFLSAGSIIHALHDEQDMRKMGGLVNILPFTYTMILIGSLSLMALPFLTGYYSKDAI 397 Query: 410 ITAG---LARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVN----RGDLGWLTT 462 + L + T+ + P + + + + Sbjct: 398 LEVAYGQFLVTGTFTYWLGTITATITAFYSSKALILGFFGTPNGSKKIYNTIHEAPLIMS 457 Query: 463 SPMVILLVMMLAMG 476 P+ +L + + +G Sbjct: 458 IPLFLLSICSIFIG 471 >UniRef50_A4XS82 NADH dehydrogenase (Quinone) n=1 Tax=Pseudomonas mendocina ymp RepID=A4XS82_PSEMY Length = 906 Score = 333 bits (855), Expect = 9e-90, Method: Composition-based stats. Identities = 120/524 (22%), Positives = 222/524 (42%), Gaps = 30/524 (5%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 + +L+ L + L R ++ + + L Sbjct: 1 MLYLLSLIALAAVSAPALTRLLGARTGWLLMLAPLVAFIWFVQQIPLVAGGETVLQSLSW 60 Query: 63 IFAAGL--WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 I A G+ L +DGL LF ++ IG L +Y+ Y+ V L ++ + Sbjct: 61 IPALGINLSLRLDGLSLLFALLISGIGSLIVLYAGSYLSSHVH--------LGRFHAYLL 112 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFG 179 +F+ ML +V +++L+ M+ E T+++S L+ ++ S AA + ++I G Sbjct: 113 VFMLAMLGLVLADDLVAMFVFWELTSIASFLLISFQHDKAVSRRAALQALLITGGGGLAL 172 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L G +L+ + + A L+ + +L+G TK+ P H Sbjct: 173 LAGLILLGGATGNWQFSSLSAEQIE---------GHALLPAIMLLVLLGCFTKSAQVPFH 223 Query: 240 AWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 WLP+A AP+PVSA L A ++ + +L R ++ +IG LL+ FG + Sbjct: 224 LWLPNAM-NAPTPVSAYLHSATMVKAGIYLLARLNPVLGGSIG---WGTLLITFGAATAV 279 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 + AF Q D+KRLLAY++V +G + + +G G+ A +L+++ HSL K LF Sbjct: 280 LGAFLAFRQTDLKRLLAYTTVTVLGQLTMLIGTNTSYGLQAFVLYLVAHSLYKGALFMAV 339 Query: 359 GNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH 418 G + GTR+L + G+++ MP T A + AG+PPF F+++ + + H Sbjct: 340 GAIDHATGTRELARLGGLIRFMPLTGAAVALAAFSNAGLPPFFGFIAKEFKYSGLIEMGH 399 Query: 419 --LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVN-RGDLGWLTTSPMVILLVMMLAM 475 + ++++L L+ A + + + + ++G ++L + + Sbjct: 400 IGWAVTLVMILTNALLFAAAGLVFLQTFLGRRGDYPRTPHEVGLPMWLGPMLLAIGGFFL 459 Query: 476 GTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASV 519 G P ++ A V G + W P+ AS+ Sbjct: 460 GAWNAWPETWLVNTAVQAVARG--PVDVNLYLWGGITPALVASL 501 >UniRef50_D0LZ06 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ06_HALO1 Length = 585 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 119/512 (23%), Positives = 196/512 (38%), Gaps = 33/512 (6%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL-------WV 53 M+ S + LL PL +LL + R V + SL L + Sbjct: 1 MTGSWLLPALLGLPLCGALLIMLLPREEAGLCRAVGLGFSLLTFGLSLGIFGYFESANAQ 60 Query: 54 VQTAADAGEIFAAGLWL--HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 Q D I G IDG+ + + + + S + Sbjct: 61 FQLVIDLPWIDGLGAHFKLGIDGISLWLVVLTTFTMPIVLLSSYSSIHKRE--------- 111 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIII 171 ++ + ML S +L + + E + L+GI+G + A+ K++I Sbjct: 112 -REFVALMLVLELGMLGAFVSLDLFLFYIFWELMLIPMYLLIGIWGGNRRIYASIKFVIY 170 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 VG L VY A V + + + LL + F + F Sbjct: 171 TMVGSLLMLAAIFYVYVVHAEVAGFYTTDLEAVQRV----LLSRDAQVWCFAAFALAFAI 226 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLI 291 K LFP+H WLPDAH +AP+ S +L+ VLL + +R+ + + G+ L I Sbjct: 227 KVPLFPLHTWLPDAHVQAPTTGSVVLAGVLLKFGVYGFLRFAVPMFP-YGTSVVAPYLAI 285 Query: 292 FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAK 351 + + A Q D+K+L+AYSSV ++G + L GI ++ +L+H L Sbjct: 286 LAVAGIIYGALVAFAQDDVKKLVAYSSVSHLGFCILGLFSMTARGIEGSIFAMLSHGLTT 345 Query: 352 TLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTIT 411 LF G + + TR + G+ MP A +F L AG+P + F+ EF+TI Sbjct: 346 GGLFLAIGVLYERRHTRRMAEYGGLWAQMPVFAGVFLICTLGSAGLPGLSGFIGEFLTIF 405 Query: 412 AGLARN------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR--GDLGWLTTS 463 + L+ L + L L+ M +++ + NR DL Sbjct: 406 GTFTTSAAYLPAPRLLGALAATGVILGAVYLLFMFQKLMFGPITRDANRGLRDLSGREMV 465 Query: 464 PMVILLVMMLAMGTHIPQPVIRILAGASTIVL 495 L+VM+ MG PQP ++ + + + Sbjct: 466 VFAPLVVMIFVMGVA-PQPFLKTMEPSVERFI 496 >UniRef50_A0M796 Na(+)/H(+) antiporter subunit A n=5 Tax=Bacteroidetes RepID=A0M796_GRAFK Length = 782 Score = 332 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 124/523 (23%), Positives = 224/523 (42%), Gaps = 32/523 (6%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA------ADAG 61 +LT LFS+ K + L L + + + + + Sbjct: 2 LTAILTGFLFSIFLVFAGKFFKGKLSILASLVPLALFVYFFQFISPISNGEVIMRSYEWI 61 Query: 62 EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 F L +DGL LF ++ IGFL Y+ Y++ L +YG+ Sbjct: 62 PSFGVDLGFKLDGLSLLFSLMITGIGFLVFAYTSSYLKGHE--------YLDRFYGYLGS 113 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVAFGL 180 F+ ML +V S+N+I ++ E T++SS FL+G +S ++A + I +G F L Sbjct: 114 FMGAMLGLVLSDNMITLFVFWELTSISSFFLIGFNNTNPASRKSAMTALGITGIGGLFLL 173 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 G +L+ A + + + + + L LA + + TK+ FP H Sbjct: 174 AGALLLNNIAGTYSISEMLTMSEAIRGNE-------LYFLAVLLIFGAAFTKSAQFPFHF 226 Query: 241 WLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLP A +AP+PVS L A ++ + +L+R+ ++ G N L++ G ++ Sbjct: 227 WLPGAM-KAPTPVSTYLHSATMVKAGIYLLMRFTPVLG---GEQIWNTTLILVGGFTMLY 282 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 +A + + D+K +LAYS++ +G++ G+G AA + I+ H+L K LF +G Sbjct: 283 SAIHTVFRTDLKGILAYSTISALGILVFLTGLGTQEAFLAAAVFIVVHALYKATLFLVTG 342 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 + + TRD+ + G+ K+M + A++ AG+PP F+ + +T A L Sbjct: 343 IIDHQTHTRDITRLAGLNKVMLPVGIAGILAAISSAGIPPTIGFVGKELTYEASYHAESL 402 Query: 420 LII--VLLLLLLTLVLAGLVRMAARVLMAK-PPQAVNRGDLGWLTTSPMVILLVMMLAMG 476 +I + ++L L+L + K P + N G++ P ++L V+ + G Sbjct: 403 VIFLLIAIVLTKILLLYAGFVAGIKPFTGKLPEEHSNVKMPGFIMWGPPLLLAVLGVVFG 462 Query: 477 THIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASV 519 ++ T + G + WH F S+ Sbjct: 463 VAPFIIESALIKPVVTAM--GGDASEIHLALWHGFNLIFILSL 503 >UniRef50_A0B819 F420H2 dehydrogenase subunit M n=2 Tax=Methanosarcinales RepID=A0B819_METTP Length = 502 Score = 332 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 110/508 (21%), Positives = 200/508 (39%), Gaps = 22/508 (4%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILA-------LWVVQ 55 S ++++ PL+ ++L F R R + + L + L Sbjct: 2 ISNAISIMIAVPLVGAVLAFLTRSRGQARLVALIASLVPLALALQMYTEFDKSSKLMQFV 61 Query: 56 TAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 + D + +D + + + ++ L IY+ G + Sbjct: 62 ESYDWVPSIGVRYTVGVDCISFPLVLLTAIVSVLVVIYAWG-----------ENHRPNQF 110 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVG 175 + L +L V T+ + + + E + FL+GI+G +A K+ I V Sbjct: 111 FALLLLNEVGVLGVFTALDFFLFYIFWEIVLIPMFFLIGIWGGPRKDYSAIKFFIYTHVA 170 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIF-WSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 L +Y + + ++ P L+ F LL GF K Sbjct: 171 SLVMLLAIFAMYFTYRLPDGSRTFDMLTLLQATSDKTVFPPGLINAIFAGLLFGFLVKMP 230 Query: 235 LFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 FP H WLPDAH EAP+ S +L+A+LL + R + + + F ++ + G+ Sbjct: 231 AFPFHTWLPDAHVEAPTAGSVVLAALLLKMGGYGIFRVILPMLPHVDKAFV-TVIAVIGV 289 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLL 354 LS+ AF L Q+DIK+L+AYSS+ +MG V + L I A+ +H + L Sbjct: 290 LSIIYGAFLALAQKDIKKLVAYSSISHMGFVTLGAVAFTWLSIQGAMFQQFSHGIITCAL 349 Query: 355 FCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 F +G + GTR ++ + G+ MP A L LA G+P + F++EFM +T Sbjct: 350 FMSAGTIQHSVGTRIISELGGLADRMPKFASLMLAAFLASLGLPGMSGFVAEFMVLTGSY 409 Query: 415 ARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK-PPQAVNRGDLGWLTTSPMVILLVMML 473 + ++++ + + + +VL + ++ D M ++ + L Sbjct: 410 PTFPVYTMLVVFTSVGVTAGYHLWACQKVLFGPILKKYLDLHDPHAYEILAMSAIVFLTL 469 Query: 474 AMGTHIPQPVIRILAGASTIVLSGTHDL 501 G P + ++ A+ V+ L Sbjct: 470 LFGLQ-PALITDMMGTAAHQVMEPVVTL 496 >UniRef50_Q0F380 NADH dehydrogenase subunit N n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F380_9PROT Length = 633 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 135/513 (26%), Positives = 222/513 (43%), Gaps = 44/513 (8%) Query: 35 VTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYS 94 + + + + L + + + +DGL FL ++G + IYS Sbjct: 2 LAISGLSAMIGGIQGLLTEPTSLILPLGLPWLPMHFRVDGLSAFFLLVIGTLLLPVAIYS 61 Query: 95 IGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVG 154 GY++ E G L+ F LF+ ML VV +++ E ++SS FLV Sbjct: 62 QGYLKGEKRLGALA--------VFLPLFVLGMLGVVIADDAFTFMLFWEMMSVSSYFLVT 113 Query: 155 IYGQR-SSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLL 213 +R + +A + Y+++ + L G ++YA + S + +++ L Sbjct: 114 FEHERLENRKAGFIYLLMAHLAGLLILGGFAVLYAASGSFEFS----------VMRAAHL 163 Query: 214 DPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIR-Y 272 P AF+ + GFGTK G+ PMH WLPDAH APS VSAL+S ++L A+ +R Sbjct: 164 FPFWATAAFLLVAFGFGTKAGVVPMHGWLPDAHPVAPSNVSALMSGIMLKVAVFGFLRVV 223 Query: 273 YIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVA------ 326 + +I + L+L G S F L Q D+KRLLAY S+EN+G++ Sbjct: 224 WDLIGPGDFQWWWGALVLTAGSASAVSGVLFALQQHDLKRLLAYHSIENIGIILIGLGLG 283 Query: 327 -----VELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMP 381 + LG+ A L H +NH+L K LLF G+G VL GTRD+ + G++ MP Sbjct: 284 MLLAHFGHPLLAALGLIAGLYHTINHALFKGLLFMGAGAVLHVTGTRDMETMGGLIHRMP 343 Query: 382 FTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLL----------LTL 431 TA+ F ++++ +PPFN F+SE++T L L +L ++ L Sbjct: 344 ATALFFLVACVSISALPPFNGFVSEWLTFQTALMAPQLGGALLTAIVPFSAAMLALAGAL 403 Query: 432 VLAGLVRMAARVLMA--KPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAG 489 A V++ V + + ++ M I ++ L + +P I ++ Sbjct: 404 AAACFVKVFGVVFLGHARSEHVAGAHEVDGWMKLGMAIPALLCLLL-GLLPVMFIPLMDA 462 Query: 490 ASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEK 522 +L + W P S Sbjct: 463 IPASLLHVSLGAHLYEHGWLWLTPVDATHASYS 495 >UniRef50_A9A3Z6 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Thaumarchaeota RepID=A9A3Z6_NITMS Length = 517 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 118/519 (22%), Positives = 208/519 (40%), Gaps = 45/519 (8%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKR-RLSATRTVTVLHSLGITLLLILALWVVQTAADAG 61 + PLL S + + ++ + T L T+L++ A Sbjct: 1 MEYALLQAVFLPLLLSPIAYILGRKVGPTPAMWFTFAILLYTTILVVNAALSGTVEEHYP 60 Query: 62 EIFAAG-LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL-------- 112 G +DGL F I+ V+ + +YS YM H+ + Sbjct: 61 WTEQFGEFGFLLDGLASPFAIIIYVLSTILVLYSKPYMIHKFHEQFEEEQKINPSSSGQS 120 Query: 113 ----------------CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY 156 Y+ + +F ML V S NLI + E + FLV ++ Sbjct: 121 SVVESSALSNYVNAKSGLYFALYLVFAMGMLGTVMSTNLIEFYIFFEVMLIPGFFLVALW 180 Query: 157 GQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPT 216 G + ++ G L G +++ S + S + Sbjct: 181 GDGPRRKIGLMFLFWTHAGAVVLLLGFLMIGLTIGSFDFADI----------KESEIPQD 230 Query: 217 LMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIII 276 +++++ + + IG G K +F H WLP H AP+P+SALLS ++ + R + Sbjct: 231 VVMISAIAIAIGLGVKLAVFMFHVWLPYVHGSAPTPISALLSPAMIGIGAYGVFRLIVEF 290 Query: 277 CQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLG 336 + ++ + G++++ L+Q D+KRLLAYSS+ MG + +G +G Sbjct: 291 LPSTFAELSIWFHIW-GLVTMLYGGAMALMQDDLKRLLAYSSISQMGYLLFGIGSMSAMG 349 Query: 337 IFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAG 396 + A + + H L K +LF +G +++K GTR ++ + G+ MP TAV GAL + G Sbjct: 350 LAGAEMMYITHGLGKGILFMMAGIIIVKVGTRSISKLGGLAGKMPITAVCAVIGALTIMG 409 Query: 397 MPPFNIFLSEFMTITAGLARN-------HLLIIVLLLLLLTLVLAGLVRMAARVLMAK-P 448 +PP + F+ E++ L + L L+ L +A ++ M RV K P Sbjct: 410 VPPTSGFMGEWILFYGALETAIEEGSTLRAVTFGLGLVATALTMAYMLWMLKRVFFGKTP 469 Query: 449 PQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRIL 487 + W T+PM++L + +G + + IL Sbjct: 470 EHLEKVKEGSWYMTAPMMVLAGFTVVLGIYPDIFLKTIL 508 >UniRef50_Q0W2B5 Hydrogenase, membrane subunit 4-like protein (HycC-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2B5_UNCMA Length = 681 Score = 331 bits (850), Expect = 3e-89, Method: Composition-based stats. Identities = 144/531 (27%), Positives = 238/531 (44%), Gaps = 50/531 (9%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 +FA L+LT L+ + R+ + A + + A+ ++ + Sbjct: 5 LEYLFAALVLTSLIGACGAIVLRRNKYCAYVAFGAATMTSVIGATLAAVILLGPGLNPEL 64 Query: 63 IFAA-----------GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 + +D L F+ + ++GF +YSIGY R V + + Sbjct: 65 SPGLRMILPMYTPFGEMSFTVDPLSAFFILAISIVGFAVSVYSIGYSREYVGKYSIGLLG 124 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIY-GQRSSLEAAWKYII 170 F+LFL +M+LVVT+ N I E ++ S LV ++ ++ A + YI+ Sbjct: 125 -----SIFNLFLLSMILVVTAGNAIQFLIVWEVMSILSYLLVVYENRKKEAVSAGFLYIV 179 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 + +G AF G +L+ S + + L + LAFV LIGFG Sbjct: 180 MTHLGTAFITVGFLLLATTTGSFDFASFKG--------AGAALPELVKSLAFVLFLIGFG 231 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 TK G+ P+H WLP AH APS VSAL+S V++ A+ +LIR + + L+L Sbjct: 232 TKAGIMPLHVWLPYAHPAAPSNVSALMSGVMVKTAIYMLIRCIFEFLGVADT-WWGLLVL 290 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAAL--------- 341 + LS + F L + D+KRLLAYS+VEN+G++ + +G + Sbjct: 291 LVASLSAVLGVLFALNETDLKRLLAYSTVENVGIILIAIGASMVFVSYGLKELAALALIA 350 Query: 342 --LHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPP 399 H NHSL K LLF G+G+VL T+++ ++ G+ K MP+T V F GAL+++ +PP Sbjct: 351 ALFHAFNHSLFKALLFMGAGSVLYAVHTKNIELMGGLAKRMPWTGVFFFVGALSISAIPP 410 Query: 400 FNIFLSEFMTITAGLARNH----------LLIIVLLLLLLTLVLAGLVRMAARVLMAKPP 449 N F+SE++ + L + + I +L L L A VR +A P Sbjct: 411 LNGFVSEWLIFQSLLLSFNFPEMIVKILIPVTIGMLALTGALAAACFVRAYGIAFLAAPR 470 Query: 450 --QAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGT 498 A D+ + M IL V+ + G + ++ + + ++ + Sbjct: 471 TEHAAEAKDVPVTMLAGMAILAVLCVVTGL-MSVFIVPAIDSVTATIIGTS 520 >UniRef50_A1WYN7 NADH dehydrogenase (Quinone) n=5 Tax=Gammaproteobacteria RepID=A1WYN7_HALHL Length = 772 Score = 331 bits (850), Expect = 3e-89, Method: Composition-based stats. Identities = 106/523 (20%), Positives = 208/523 (39%), Gaps = 33/523 (6%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA------ADAG 61 +L+ L ++L + +TL L + Sbjct: 2 LAAVLSGFLLAVLVPWLQPVLGRRAGWAFAALPAVLTLYFATFLPQIVGGETVWMEYTWV 61 Query: 62 EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 L ++DGL LF ++ IG +Y+ Y+ + +Y Sbjct: 62 PGLDVNLSFYVDGLSLLFALLISGIGTFVLLYASDYLDGDD--------RQPRFYVHILA 113 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAWKYIIICTVGVAFGL 180 F+ +ML +V S+NLI ++ E T+++S L+G + A + +++ G L Sbjct: 114 FMASMLGLVLSDNLITLFIFWELTSITSYMLIGYDNEDAKARRYALQGLLVTVGGGLALL 173 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 G +++ + + + + + + + +L+G TK+ P H Sbjct: 174 AGFIMLGIVGDTYTISELLE-------QGDVIREHEWYVPLTLLILLGAFTKSAQVPFHF 226 Query: 241 WLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLP A + AP+PVSA L A ++ + +L + + + + LL + G +++ Sbjct: 227 WLPRAMA-APTPVSAYLHSATMVKAGVFLLAKLHPALGD---TALWMTLLPLVGAITMFT 282 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 A+F + IK +LA S+V +G + + GIG + A +L HSL K LF +G Sbjct: 283 GAYFAVRSTGIKGVLANSTVMALGTLTMLAGIGTEGAMIAFGAFLLAHSLYKGALFLVAG 342 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH- 418 + + GT+++ + G+ MP TAVL AL+LAG+PP FL + + + + L + Sbjct: 343 ALDHETGTKEILQMGGLRHAMPKTAVLAAVSALSLAGIPPLFGFLGKELMLESVLEAPYL 402 Query: 419 --LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMG 476 +L ++ L + +V+ + + + + +L + + G Sbjct: 403 SAVLALLALGTAVLVVIVAGIVAIRPFFGERTETPKEPHEAPPGMLAGPAVLGTLSVLFG 462 Query: 477 THIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASV 519 P ++ ++ + + S WH S+ Sbjct: 463 LFPFLP-EGLIGAVASSLAG--EPVSVSLSLWHGINLPLIMSL 502 >UniRef50_C0XU58 CPA3 family monovalent cation (K+ or Na+):proton (H+) antiporter-3, MnhA subunit n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XU58_9CORY Length = 954 Score = 331 bits (850), Expect = 4e-89, Method: Composition-based stats. Identities = 124/522 (23%), Positives = 213/522 (40%), Gaps = 44/522 (8%) Query: 19 LLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA------ADAGEIFAAGLWLHI 72 +L + + L LG ++ LA L I Sbjct: 14 VLAPFVGRVLGRNAGWMLALPLLGAAVIGALAYVSPSAGDAHAETVAWIPSLNVDFALRI 73 Query: 73 DGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTS 132 DGL +FL ++ +IG YS Y+ + +Y F M +V + Sbjct: 74 DGLSIVFLMLVLLIGAGVLAYSTRYLH----------QSKPSFYLLMCGFAAAMSTLVLT 123 Query: 133 NNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAAS 192 +NL+V + A E TTL S FL+ G A + +++ G L TV++ S Sbjct: 124 DNLVVFYIAWEMTTLCSFFLIA-NGGEKGYAPAIRTLLVTVGGGLLLLTATVIMCITTGS 182 Query: 193 VMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSP 252 +A ++ P L L + + TK+ FP AWLPD+ A +P Sbjct: 183 TQLSVVLA-------DETWTQRPGLTTLVALLVAGAAFTKSAQFPFQAWLPDSMV-AIAP 234 Query: 253 VSALLSAV-LLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIK 311 VSA L A ++ + +++RY + D + L+ G+++ A + Q D+K Sbjct: 235 VSAYLHAAAMVKAGIYLILRYSPMF---AAVDAWHIALVTAGLITSLFGAMTAVKQSDLK 291 Query: 312 RLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLN 371 LLAYS++ +GL+ +GIG + AA++H + H++ K LF G V + GTR+ + Sbjct: 292 ALLAYSTMSQLGLLVAVVGIGTQEALTAAIVHTIAHAVFKAALFMSIGIVEHETGTRNFH 351 Query: 372 VVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH-----LLIIVLLL 426 + + MP T + A ++AG+PP F+S+ M + AGL+ H L+ ++ Sbjct: 352 ELRNLRVRMPVTQAIVVISAASMAGLPPLAGFVSKEMLLAAGLSAPHKEALVTLVTGGIV 411 Query: 427 LLLTLVLAGLVRMAARVLMAKPPQ----AVNRGDLGWLTTSPMVILLVMMLAMGTHIPQP 482 + A R VL + Q + G+ + IL +A+G + Sbjct: 412 VTSIFTFAYSYRYVLGVLGDRRNQLSGTSKTVGEASPSFFAVPAILAAATVAIGIYP--- 468 Query: 483 VIRILAGASTIVLSGTHDLP-AQRSTWHDF-LPSGTASVSEK 522 + + VL+ T + + WH LP +++ Sbjct: 469 -HMLNGPVADAVLATTGEFEDPHLALWHGLNLPLALSALVIA 509 >UniRef50_Q6L0I7 NADH-quinone oxidoreductase chain L n=1 Tax=Picrophilus torridus RepID=Q6L0I7_PICTO Length = 607 Score = 331 bits (849), Expect = 4e-89, Method: Composition-based stats. Identities = 110/490 (22%), Positives = 223/490 (45%), Gaps = 30/490 (6%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 ++ L+++ P L + ++ ++ + +L+ ++ Sbjct: 1 MISLYLLIIIIPAAGFPLEYLLKRF---TGLYSSLAILASLLILIDAYIYGGNIYVHYTW 57 Query: 63 IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 + ++ID L + I+ + + ++S+ YM + + Y+ +F Sbjct: 58 FYNIDFGIYIDHLSLIMAFIVSSVSLIINVFSVFYMGKDPRNRT--------YFSEISIF 109 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYG-QRSSLEAAWKYIIICTVGVAFGLF 181 + +ML +V S+NL+ + E + S L+G + + ++ AA K ++I G + Sbjct: 110 VASMLGLVLSSNLVFTFLFWELVGIMSYLLIGFWYFKPNAAYAAKKSLLITRFGDLSFII 169 Query: 182 GTVLVYANAASVMPQAEMAI--FWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 G ++Y + + P + ++I S S ++ + L+ +F+ IG +K+ FP+H Sbjct: 170 GLSIIYVSLNRIDPASPLSIPYLISNSGYISKIIGKYTLTLSLMFIFIGALSKSAQFPLH 229 Query: 240 AWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 WLPD+ E P+ VSAL+ A ++ + ++ R + + + + I G ++ Sbjct: 230 VWLPDSM-EGPTTVSALIHAATMVTAGVYIIARLFPLFYY----SYSMYTIAIIGSVTAI 284 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFA---ALLHILNHSLAKTLLF 355 + A + D+KR+LAYS++ +G + LG+ G A+ +L H++ K LLF Sbjct: 285 LGALMGIAVNDMKRILAYSTMSQLGYMFSALGMSGIFFYSGVSFAMYQLLVHAVFKALLF 344 Query: 356 CGSGNVL-LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGL 414 + V+ TRD+ + G+ + MP TA+L G++ LAG+PP F S+ + G Sbjct: 345 MSAAVVMMYTLETRDIRSLGGLFRKMPATAILMLIGSITLAGIPPTAGFYSKDEIVFLGY 404 Query: 415 A----RNHLLIIVLLLLLLTLVLAGLVRMAARVLMA--KPPQAVNRGDLGWLTTSPMVIL 468 A ++L +LLL+ + + RM + + K A N D ++ P++IL Sbjct: 405 AYFERTGNILPFMLLLITEAVTSIYIFRMYFNIFLGKTKTKAAENAKDPKFIYLIPLIIL 464 Query: 469 LVMMLAMGTH 478 + L +G Sbjct: 465 AFLSLFLGPF 474 >UniRef50_B6YWP6 Hydrogenase 4, subunit 3 n=3 Tax=Thermococcus RepID=B6YWP6_THEON Length = 634 Score = 330 bits (848), Expect = 5e-89, Method: Composition-based stats. Identities = 144/516 (27%), Positives = 230/516 (44%), Gaps = 34/516 (6%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILAL--------WVVQT 56 + ++++ + + F+ ++ L SL I I+ L ++ Sbjct: 4 IFLFIVIILSVASFIGVFSRSAILTKLVNALSALGSLTIAYAGIVGLKESVELNITLLHL 63 Query: 57 AADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 +D+ + L L +D L G F+ ILG++GF T +Y I Y+ L Y Sbjct: 64 KSDSIINAFSTLTLKVDPLSGFFMIILGILGFCTSVYGIAYLDMYKGDKRL-------YA 116 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGV 176 + LFL M LV+ S NL+ E TL S FLV +L A KY + Sbjct: 117 FNYPLFLLFMFLVLVSWNLLWFVVFWELMTLFSQFLVAFERNEKTLIATLKYFCMTKAAA 176 Query: 177 AFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLF 236 F L VLV + ++ + P M L +IG G K L Sbjct: 177 DFMLIAIVLVLITISGGGDYDILSSQLVNYFRS----HPLEMYLVSAGFMIGLGVKAALV 232 Query: 237 PMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 P H WLPDA+ EAPS VS+LLS + + ++ R+++ + L+ +FG L+ Sbjct: 233 PFHVWLPDAYVEAPSNVSSLLSGAMEKMPVYMMFRFFLSFTP--LTPNIGLLIALFGTLT 290 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHIL 345 + + L Q D KRLLAY SV +G V LG G G L + A+L H L Sbjct: 291 LFFGTMYALKQTDSKRLLAYHSVGQIGYVVFALGAGIYLLSKGYTTFGALALMASLFHAL 350 Query: 346 NHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 NH+ K LLF +G++L + G+RDL+ + G+ + MP TA G+L++AGMPPFN F+S Sbjct: 351 NHAFFKGLLFLTAGSILYRTGSRDLDHLGGLARFMPITAFAALIGSLSIAGMPPFNGFVS 410 Query: 406 EFMTITAGLARNHL--LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTS 463 ++M + L L L L L + + A V+ + + P + + ++ + Sbjct: 411 KWMIYVSTLPTPTLVSLFGALALFISAVTTASFVKYFTSIFVRPPAKEITVKEVPVSMWA 470 Query: 464 PMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTH 499 +IL V+ + G + P+ I ++ ++ Sbjct: 471 SQLILAVLCVIFGVYPALPLEAISKAVDSVGVTTPS 506 >UniRef50_A4SFL0 NADH dehydrogenase (Quinone) n=5 Tax=cellular organisms RepID=A4SFL0_PROVI Length = 767 Score = 330 bits (847), Expect = 9e-89, Method: Composition-based stats. Identities = 119/520 (22%), Positives = 224/520 (43%), Gaps = 32/520 (6%) Query: 10 LLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA----ADAGEIFA 65 L+ T L S + KR + VL L + + + + + Sbjct: 4 LIATGFLASAIAPVLYKRYRENFGWIAVLFPLYMFFGFLSRYPEIAAGNSVRESLPWVPS 63 Query: 66 AGL--WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFL 123 G+ +DGL F I+ ++G +++ YM+ G +Y + +F+ Sbjct: 64 LGINFSFLLDGLSLTFALIISLVGAAVFLFAGAYMKGYRDAG--------RFYLYIGVFM 115 Query: 124 FTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVAFGLFG 182 +ML +V ++N+++++ E T+ SS L+G + S ++A + +++ G L G Sbjct: 116 TSMLGLVLADNMLLLFVFWELTSFSSYLLIGFNHHKESSRKSALQALLVTGGGGLALLAG 175 Query: 183 TVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWL 242 +L+ + + + + + L V LL+G TK+ FP H WL Sbjct: 176 ILLLGSVTGTYEISSFYDMNRI-------ITSSALYPAIVVLLLLGAFTKSAQFPFHFWL 228 Query: 243 PDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 P+A EAP+PVSA L A ++ + ++ R + G+ +LI G +++ A Sbjct: 229 PNAM-EAPTPVSAYLHSATMVKAGIYLIARLN---HEIGGTPLWQDTVLITGAVTMLFTA 284 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 Q D+K+LLAYS++ +G + + LGIG L I A ++++ HSL K LF +G + Sbjct: 285 TLAFRQTDLKKLLAYSTLSVLGTLVMLLGIGSELAIKAFFIYLIAHSLYKGTLFLVAGTI 344 Query: 362 LLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLI 421 + GTRD+ + G+ K MP TA + ++ G+ P F+ + A L + + Sbjct: 345 DHETGTRDVGKLAGLRKAMPVTAAAAALASFSMMGVIPLIGFIGKETVYKAILELDRWGL 404 Query: 422 IVLLLLLLTLVLAGLVRMA--ARVLMAKPPQAVN-RGDLGWLTTSPMVILLVMMLAMGTH 478 ++ +L +V + R + K + + +L V+ L +G Sbjct: 405 PLIGAAVLANACVVMVTLLVGFRPFLGKAKETPRQAHEAPLKMLLGPSLLAVLGLLIGLF 464 Query: 479 IPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTAS 518 + +L ++ +L + +L + WH F S Sbjct: 465 PDFFISAMLEQSARNIL--SEELSLKIVLWHGFNLVLILS 502 >UniRef50_B9LT20 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LT20_HALLT Length = 798 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 126/528 (23%), Positives = 217/528 (41%), Gaps = 26/528 (4%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQT-AADAGEIF 64 + + P + ++L + T + + LL + T A Sbjct: 7 IVTTAVALPFVAAVLSPLLYRVLGERTGYAGAVVAAASFGLLATEVNSHGTVGASWVPAL 66 Query: 65 AAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLF 124 G+ +DG G LF + IG L +YS YM E L YY F+ Sbjct: 67 DVGVQFTVDGWGLLFALLASGIGVLVFVYSAAYMHGEEG--------LARYYAALLAFMG 118 Query: 125 TMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLFGT 183 ++L V +++L+ ++ E T+L S L+G Y S +A +++ G L G Sbjct: 119 SILGVALASDLVFIFLFWELTSLCSFVLIGHYTDDSESRYSARMAMVVTVGGGLCLLAGL 178 Query: 184 VLVYANAASVMPQ---AEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 +++ A + A+ ++ ++SL + L + A ++ K+ P+H Sbjct: 179 LMLAVAARGALGGVTFDLTAMIANDEAMRASLRESGLFVPALGLIVAAAAAKSAQVPLHF 238 Query: 241 WLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLP+A AP+PVSA L A ++ + L R ++ S ++ G+L++ V Sbjct: 239 WLPNAMV-APTPVSAFLHSATMVKVGVYFLGRVRPLLM----SPEWVLVVATLGLLTMTV 293 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 A + D K LLAYS+ ++GL+ G G A H+LNH+L K LF +G Sbjct: 294 GALLAVAATDTKELLAYSTASHLGLMVAGFGFDIVYGGEAGAFHLLNHALFKAPLFLVAG 353 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNH- 418 + + GTR+L+ + G+ + +P TA + AL++AG+PPFN F S+ + A H Sbjct: 354 IIAHEAGTRNLDNLGGLWRELPVTAAITVVAALSMAGIPPFNGFYSKELLFEATYEVAHE 413 Query: 419 -----LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMML 473 L + L L + V+ A + + P +L + + Sbjct: 414 AGGIAWLYPTVATLASVLTVVYSVKFLALFFGERRAPTADIHRPPIGLVGPPAVLAIAAV 473 Query: 474 AMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSE 521 + V I+ GA +G L T H P ++V+ Sbjct: 474 VVSVAPQLAVDAIVQGAVDATATGEAQLEVGLPT-HFSPPVAMSAVAV 520 >UniRef50_Q9UYN2 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3 n=1 Tax=Pyrococcus abyssi RepID=Q9UYN2_PYRAB Length = 647 Score = 329 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 126/491 (25%), Positives = 213/491 (43%), Gaps = 33/491 (6%) Query: 15 LLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDG 74 L L+ F + + V + L + V G++ GL ++IDG Sbjct: 6 LALPLVLFILGMLGGLSKKAFKVSSAFAALASLSIVALVFNLKPVEGKL--LGLPVYIDG 63 Query: 75 LGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNN 134 +F+ ILG++GF +YSI YM Y ++ FL +M L++ ++N Sbjct: 64 FSLIFMLILGILGFSASLYSIPYMERHPGKE-------WVYAVAYNAFLLSMFLILITSN 116 Query: 135 LIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAF-GLFGTVLVYANAASV 193 L+ E TLSS L+ + KY I + F + Y+ S+ Sbjct: 117 LVWFVFFWELMTLSSFILITW--DEKDFDPGIKYYIAMHILTTFPLFISLGVSYSFLGSL 174 Query: 194 MPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPV 253 + L + LL + LI F K+G+ P H W+P + APS + Sbjct: 175 D---------AMTYPNLKSLPSSATLLLYASFLIAFMAKSGIVPFHFWVPSTYKVAPSNI 225 Query: 254 SALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRL 313 S+LL+ + A+ LIR S L+ + G +++ V + L + D K+L Sbjct: 226 SSLLAGAMEKIAVFGLIRIMYTALPTPKS--IGYLVALLGAVTLTVGTLYALRESDAKKL 283 Query: 314 LAYSSVENMGLVAVELGIG-------GPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYG 366 LAY S+ MG + + +GIG G LG+FA + H LNHSL K LF +G+V G Sbjct: 284 LAYHSIGQMGYIWLGIGIGLSLDSPLGALGMFAGIFHALNHSLFKGSLFLSAGSVEYATG 343 Query: 367 TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLI---IV 423 +L+ + G+ + M +T + +LA++G+PPFN FLS+++ TAG +++ V Sbjct: 344 ETNLDNLGGLAERMKWTGLATLLASLAISGVPPFNGFLSKWLIYTAGYNSGDMVLSFGAV 403 Query: 424 LLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPV 483 L + + + LA ++ + + + ++ P +IL + L +G V Sbjct: 404 LAVFISAVTLASFIKFYTSQFGGESERYRDVSEVPLSMVVPQLILSSLCLIIGIFPALVV 463 Query: 484 IRILAGASTIV 494 I + Sbjct: 464 PLINEPIGAPI 474 >UniRef50_A5WG38 Proton-translocating NADH-quinone oxidoreductase, chain L n=16 Tax=Bacteria RepID=A5WG38_PSYWF Length = 624 Score = 329 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 119/516 (23%), Positives = 221/516 (42%), Gaps = 38/516 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEI-- 63 + L + P + L+ R R + + S+G++ L L + + Sbjct: 3 LLPLTFIFPAISFLILAFMRDRLPEVSAKWLGVGSMGLSALCALIASYTYLSQNDPSTVI 62 Query: 64 ------------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVT 111 FA L DGL ++ +GFL +++ YM+ + Sbjct: 63 NIPLWTWLQVGDFAPNFGLSFDGLALTMTGVITGVGFLIHLFASWYMKGDQG-------- 114 Query: 112 LCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYII 170 ++ + +LF+ +MLL+V ++NL++++ E + S L+G Y + AA K Sbjct: 115 FARFFSYMNLFVASMLLLVLADNLLLLYLGWEGVGICSYLLIGFYFDNRANGRAAMKAFT 174 Query: 171 ICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFG 230 + VG F FG L++ ++ Q + + + ++LA + L+ G Sbjct: 175 VTRVGDVFLAFGLFLLFREFGTLNIQDIITQAPQMFAA-----NNSTLVLATMMLVGGAM 229 Query: 231 TKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLL 289 K+ P+H WL DA + P+PVSAL+ A ++ + ++ R + + G + Sbjct: 230 GKSAQIPLHTWLADAMA-GPTPVSALIHAATMVTAGVYLIARLHPLFILTPG--VLLYWV 286 Query: 290 LIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSL 349 G +++ VA F L Q DIKR+LAYS++ +G + + LG+G A+ H++ H+ Sbjct: 287 GAVGAITLVVAGFCALAQTDIKRILAYSTMSQIGYMFLALGVG---AWQGAIFHLMTHAF 343 Query: 350 AKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMP-PFNIFLSEF 407 K LLF +G V+ + +++ + G+ K +P F G ALA +P F S+ Sbjct: 344 FKALLFLSAGAVITAVHHEQNIFKMGGLRKKIPLVFWCFIIGGGALAAIPWVTVGFYSKE 403 Query: 408 MTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVI 467 + A + ++ + + L RM + ++ G P+++ Sbjct: 404 AILWESYATGNQVLFYMGVFGALLTSLYTFRMIWFTFFGEEKTHAHKL-SGLSYQIPLIV 462 Query: 468 LLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPA 503 LLV+ A+G I P+ +L + VL D A Sbjct: 463 LLVLSTAVGALITPPLQGVLPESVGHVLEMNGDAHA 498 >UniRef50_Q9ZZQ0 NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Cyanidioschyzon merolae RepID=Q9ZZQ0_CYAME Length = 666 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 101/503 (20%), Positives = 205/503 (40%), Gaps = 37/503 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALW-----------VV 54 M+ + PLL L C + V I+LL + ++ + Sbjct: 1 MYLTTVFGPLLGFLTCMLFGRFLGKIGACFIVCFCTAISLLFSIIIFYEVCIADYTNNIF 60 Query: 55 QTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 T + + D L + L + + L +YS+ Y+ + Sbjct: 61 FTLWLSTGLLEIPWGFLFDPLTAVILLTINFVSLLVNVYSVEYIGEDPH--------QVR 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICT 173 + + ++F F + ++VT+NN + ++ E L+S L+ + R + ++A K III Sbjct: 113 FIAYLNIFAFFITILVTANNFLQIFLGWEGVGLASYLLINFWFTRLLASKSAIKAIIINR 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIF-WSEVLKQSSLLDPTLMLLAFVFLLIGFGTK 232 VG F L++ S+ +I + + + + + + +FL +G K Sbjct: 173 VGDFFLSLAIFLIFLKYKSLNYDIVFSITPFMSNYIECLGIKFSYLDMIRLFLFLGAIGK 232 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLI 291 + MH WLPDA E P+PVSAL+ A ++ + +++R I+ + + + Sbjct: 233 SAQIGMHIWLPDA-IEGPTPVSALIHADTMVTAGVFLIVRCSPILEYSSN---VLIFISV 288 Query: 292 FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAK 351 G + A + Q D+K+++AYS+ +G + GI ++ H++NH+ K Sbjct: 289 IGASTSLFAGSVAIFQNDLKKVIAYSTCSQLGYMIFACGISN---YIPSIFHLVNHAFFK 345 Query: 352 TLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 LLF +G ++ + +D+ + +L+I+P ++ G+L+L G+P F S+ + + Sbjct: 346 ALLFLSAGYIIHSLFNEQDIRRIGSLLRILPIAYLMIMIGSLSLIGIPFLTGFYSKDLIL 405 Query: 411 TAGLARNHL---LIIVLLLLLLTLVLAGLVRMAARVLMAKPP----QAVNRGDLGWLTTS 463 + + L ++ L R+ + KP + T Sbjct: 406 ELSFTSYFIINDFVYYLAIVSACLTAIYSTRLILLTFITKPNFSKISLIKLHYSSNWITL 465 Query: 464 PMVILLVMMLAMGTHIPQPVIRI 486 P++IL + G + + + Sbjct: 466 PLLILAFASICFGFILKDIFVGL 488 >UniRef50_C7MLM1 Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=3 Tax=Bacteria RepID=C7MLM1_CRYCD Length = 672 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 132/534 (24%), Positives = 235/534 (44%), Gaps = 44/534 (8%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 MS + +F ++ + +L + + ++ V + + + A+ Sbjct: 1 MSATTLFLTSVVFSCVGALASILAMRNQQASKVIGCVFGMVSALFGIAAGCQAIVGTAEW 60 Query: 61 G----EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 A L ++ L GL + ++ V+ F IY + Y G + Sbjct: 61 SSVVTPFSFANFSLLLNPLSGLLMLVISVLAFAAWIYGLNYFDEYKGQGLGTMG------ 114 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGV 176 F +LF+ +M V+ +N + E +L+S FLV + +S++ + Y+I+ +G Sbjct: 115 FFMNLFIASMGFVICVDNALWFLVFFELMSLTSYFLVIVEQNETSIKGGFLYLIMAHIGF 174 Query: 177 AFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLF 236 + ++ S QA ++S P + L FV IGFG K G+ Sbjct: 175 FLIMIAFFVMAGLTGSFEFQAF----------RTSAFSPVISSLVFVLCFIGFGCKAGMI 224 Query: 237 PMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQA-IGSDFPNRLLLIFGML 295 P H+WLP AH APS VSAL+S ++ + +++ + + Q+ + L+L+FG + Sbjct: 225 PFHSWLPQAHPAAPSNVSALMSGGMIKIGVFGMVKVGLDLLQSSPVELWWGILVLLFGAV 284 Query: 296 SVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHI 344 S + + L + DIKRLLAY SVEN+G++ + +GIG LG A H+ Sbjct: 285 SSVLGVVYALAEHDIKRLLAYHSVENIGIILLGVGIGFIGVAVGNPIVAVLGFLAGFYHL 344 Query: 345 LNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFL 404 NH++ K LLF G+G+VL GTR++ + G+ ++MP TA+ F G+LA++ +PP N F+ Sbjct: 345 FNHAMFKGLLFLGAGSVLYSTGTRNMEKMGGLARVMPVTAMCFLIGSLAISAIPPLNGFV 404 Query: 405 SEFMTITAGLARNHL----------LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV-- 452 SE+ T + V L + L + V+ ++ P V Sbjct: 405 SEWFTYQSMFTAAFAGDAVIRLFAAFAAVSLAITGALAVTCFVKAYGVTFLSAPRSDVAR 464 Query: 453 NRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRS 506 N ++ M ++ + + MG P + A V + + + A + Sbjct: 465 NAQEVPGPMKFAMGLIAFICVCMGLGAPWVAPIMQHIAEATVQAPSLGVTAGLA 518 >UniRef50_Q7UXC2 NADH dehydrogenase/oxidoreductase n=1 Tax=Rhodopirellula baltica RepID=Q7UXC2_RHOBA Length = 492 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 119/469 (25%), Positives = 218/469 (46%), Gaps = 19/469 (4%) Query: 17 FSLLCFACRKRRLSATRTVTV---LHSLGITLLLILALWVVQTAADAGEIFAAGLWLHID 73 + LC +R + T + V ++ I L+ ++ V G G+ +D Sbjct: 16 AAPLCVIVHQRTAAYTLALVVSWITFAISIALVAQVSQTGVIRYNLGGWAPPYGIEYLVD 75 Query: 74 GLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSN 133 L + + IG + +Y+ + E+A + +Y + L L ++ + + Sbjct: 76 SLSSFVMMFVSGIGAIVLVYAPKSVDDEIARSKHYL-----FYATYLLCLTGLMGMCVTG 130 Query: 134 NLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASV 193 +L ++ +E ++LSS L+ + R + AA++Y+II ++G F L G L+Y ++ Sbjct: 131 DLFNVFVFLEISSLSSYALISLGQTRRAPLAAFQYLIIGSIGATFILIGIGLLYQMTGTL 190 Query: 194 MPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPV 253 A P +L+AF FL+IG K +FP+H WLP+A++ APS V Sbjct: 191 NMADIAARV-------PHENGPRTVLVAFGFLVIGLCVKMAVFPLHTWLPNAYTYAPSVV 243 Query: 254 SALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRL---LLIFGMLSVAVAAFFILVQRDI 310 + ++A ++ IR I + L L I ++ + VA+ + Q ++ Sbjct: 244 TCFIAATATKVSVYAFIRVIFGIITPGFAFDYLPLDTELTILALVGIFVASTAAIYQANV 303 Query: 311 KRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDL 370 KRLLAYSSV +G + + + + P G+ A ++H+ NH+L K LF G L+ G+ L Sbjct: 304 KRLLAYSSVAQIGYMILGISMSTPGGLTAGIVHMFNHALIKGGLFMIVGCFALRLGSVKL 363 Query: 371 NVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLT 430 + G K MP+T++ + G LAL G+P F+S+++ +TA + + + VL+LL Sbjct: 364 DDWKGAGKTMPWTSLGWAIGGLALIGVPVTAGFISKWLLLTAAMEKGMWPVAVLMLLSSL 423 Query: 431 LVLAGLVRMAARVLMAKPPQAV-NRGDLGWLTTSPMVILLVMMLAMGTH 478 L + + R+ + ++P V + P ++L G Sbjct: 424 LAVVYVWRVVETLYFSEPTAKVLQAKEAPLGMLIPTYVVLAGTFVFGVW 472 >UniRef50_B2V8R6 NADH dehydrogenase (Quinone) n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V8R6_SULSY Length = 662 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 127/448 (28%), Positives = 214/448 (47%), Gaps = 43/448 (9%) Query: 63 IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 I +D L F+ ++ ++ F + IYS+ Y++ L+ ++LF Sbjct: 59 IPFLTFSYKVDNLSLFFVGLVSLLSFASSIYSVSYIKEFENQKVLT--------FLYNLF 110 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFGLF 181 +F+M++V+ S N+ E ++ S LV ++ +L A YI + +G F + Sbjct: 111 IFSMIMVILSANVPTFLIWWEIMSVVSFLLVIFDYKKQENLNAGIFYIFMTHLGTTFIII 170 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 +L+Y + S+ + + + L + L F+ LIGFGTK G+F +H W Sbjct: 171 SFILLYIYSGSLEFKDFVNVN----------LPEDVKFLVFLTSLIGFGTKAGIFLLHFW 220 Query: 242 LPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 LP AH APS VSAL+S V++ A+ +LIR+Y + + F ++L G LS Sbjct: 221 LPKAHPVAPSNVSALMSGVMIKTAIYMLIRFYFEFLKDMPVAF-GYIVLFIGALSAIYGI 279 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGG-----------PLGIFAALLHILNHSLA 350 + VQ DIK++LAYSS+EN+G++ + +G+ + A L H LNH++ Sbjct: 280 LYAYVQTDIKKMLAYSSMENIGIILIAVGLAMIFKSSHVWILMGISFIAVLYHTLNHTVF 339 Query: 351 KTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 K LLF G+G+VL K T+++ + G+ KIMP T +LF G L + +PPFN F+SE++ Sbjct: 340 KGLLFLGAGSVLFKTHTKNMEELGGLNKIMPKTGILFLIGILGITALPPFNGFVSEWLIY 399 Query: 411 TAGLARN----------HLLIIVLLLLLLTLVLAGLVRMAARVLM--AKPPQAVNRGDLG 458 + L + L +L L L ++ V + + + + Sbjct: 400 QSLLFGSKLNYEFISFTMPLFASVLALTGAFALGSFAKLYGTVFLGIGRTDKVKKASESD 459 Query: 459 WLTTSPMVILLVMMLAMGTHIPQPVIRI 486 + M L M++ +G PV I Sbjct: 460 GFMLTGMGFLAFMVVILGLIPILPVYVI 487 >UniRef50_C0GJ30 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ30_9FIRM Length = 497 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 131/499 (26%), Positives = 233/499 (46%), Gaps = 21/499 (4%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGIT-----LLLILALWVVQTAADAG 61 +L+L L+ + L A A VL + LI + G Sbjct: 9 PPVLVLLVLMAAFLMPAFAHFGRKACGPAAVLTMVAAFIYSLHFALITRDGQTIAYSVMG 68 Query: 62 EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 G+ + I+ L ++ + + IYS+ + E + + YY F L Sbjct: 69 WDAPWGIEVIIEPFSAFMLLVISAVCLVIMIYSMSSLGRE-----IPASGIGWYYTTFLL 123 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLF 181 + +M+ +V +N+L M+ IE T +++ LV G R + EA++KY+++ TVG F L Sbjct: 124 LVGSMMGMVMTNDLFNMYVFIEVTGIAACALVLAKGGRLATEASFKYLLLATVGSGFVLT 183 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 G L+Y ++ A F + P L+ F L+GFG K+ LFP+H W Sbjct: 184 GIALIYVITGNLNISFVAAEFALVYPQY-----PYLIWTVLSFFLVGFGIKSALFPLHVW 238 Query: 242 LPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD--FPNRLLLIFGMLSVAV 299 LPDAHS AP+ SA+LS +++ ++ L ++Y I D F ++LI ++ Sbjct: 239 LPDAHSSAPTTSSAVLSGLVVKAYIVALAKFYFQIFGFDLLDQIFIRHMILIMATGAILG 298 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 + F VQ D+KR LAYSSV +G + + LG+ P+G+ A +LHI NH++ K LF +G Sbjct: 299 GSMFAFVQLDLKRRLAYSSVAQIGYIFLGLGLSSPIGLAAGILHIFNHAVMKACLFLAAG 358 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 + + G + +N + G+ MP T F AL++ G+P F+ F+S++ + Sbjct: 359 AIYRQTGEKRVNRLQGLAFQMPITMFAFSIAALSMVGLPLFSGFISKWYLALGSIEAGMP 418 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLM---AKPPQAVNRGDLGWLTTSPMVILLVMMLAMG 476 + + L++L L + + + + + P+ + + +V+L + ++ G Sbjct: 419 MFVGLIILSGLLNASYFLPIVWQAFFVVDEQEPKTFTMDKIPVSMSVSLVVLAMAVIYFG 478 Query: 477 THIPQPVIRILAGASTIVL 495 + P+ + A ++L Sbjct: 479 INPEFPL-ALATKAVGVLL 496 >UniRef50_Q1NQL7 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Bacteria RepID=Q1NQL7_9DELT Length = 507 Score = 328 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 112/516 (21%), Positives = 207/516 (40%), Gaps = 30/516 (5%) Query: 7 FALLLLTPLLFSLLCFACR-----KRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG 61 + L+ PLL +L+ A + +T S+ + L + + Q Sbjct: 13 LSALVFLPLLGALVMLALPGDNACRNWALIVTVITACVSMPLFFLFDRSTHLYQFGEHHT 72 Query: 62 EIFAAGL--WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 I A + L IDG+ L + + +I L + S Y+ + ++ Sbjct: 73 WIEAWNINYTLGIDGISLLLVLMTTLIMPLCVLGSWRYI----------QKRVKEFMICL 122 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFG 179 L ML V + + ++ + EA + L+ ++G + A+ K+ + G Sbjct: 123 LLMETAMLGVFMALDFVLFYIFWEAMLIPMYLLIAVWGGPRRMYASIKFFLYTLAGSVML 182 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L + ++ + +S L T + F+ + F K +FP H Sbjct: 183 LVAIIALFLTS--------EPQTFSIPLLMEQSYSTTFQIWVFLAFFLAFAIKVPMFPFH 234 Query: 240 AWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLP AH EAP+ S +L++VLL +R+ + I + +L ++ + Sbjct: 235 TWLPAAHVEAPTAGSVILASVLLKMGTYGFLRFCLPITPE-ATHIFMPYILWLSIIGILY 293 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 F L Q+D+K+L+AYSSV +MG V + + + GI A+L ++NH + LF G Sbjct: 294 GGFTALAQQDMKKLIAYSSVGHMGFVTLGIFVLNSQGIQGAILQMINHGITTGALFFCVG 353 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 + + +R+L + G+ + MP + G AL+ P N F+ EFM + + Sbjct: 354 MLYERTHSRELALNAGVGRFMPIYVLFLGFFALSSLAFPGTNSFIGEFMILAGSF-SYSI 412 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRG--DLGWLTTSPMVILLVMMLAMGT 477 +I + L A + R+ RV+ +RG DL + LL+ + +G Sbjct: 413 IIAAFAIPGAVLAAAYMFRLLQRVVWGGTDNPEHRGLLDLNLREVVVLAPLLLFVFWIGL 472 Query: 478 HIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLP 513 P P + ++ + +L+ + P Sbjct: 473 -SPAPFLEVMEVSVAHLLTQVGATEGGTTLAQYLAP 507 >UniRef50_C5C6P2 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit n=3 Tax=Micrococcaceae RepID=C5C6P2_MICLC Length = 1032 Score = 328 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 118/550 (21%), Positives = 206/550 (37%), Gaps = 47/550 (8%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG--- 61 ++ L L + + F R+ L + ++ +Q A DAG Sbjct: 2 LVILTALFVVALAAPVIFRWTGRQGFYLLAAAPAAGFVWLLTQLPHVFALQEALDAGRPV 61 Query: 62 --------------EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGEL 107 L +D L I+ +G L Y Y R Sbjct: 62 PASAAHLDRTVPWVPYLEIELAFRMDVLAAFMSLIVLGVGALVLAYCARYFREHE----- 116 Query: 108 SPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAW 166 + G F M +VT+++L+V++ E T++ S L+G G R + +A Sbjct: 117 --PRNAVFGGQLLAFAGAMFGLVTTDDLMVLYTFWEITSVLSFLLIGYSGHRIFARRSAI 174 Query: 167 KYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLL 226 +I+ T G L G +++ A S +A + + L+ +A +L Sbjct: 175 TALIVTTFGGLAMLAGLIMLAHFAGSWRISGVLAAAPGLLADDGGRV---LLEVAVGLVL 231 Query: 227 IGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDFP 285 IG TK+ P H WLP A + AP+PVSA L A ++ + ++ R Sbjct: 232 IGALTKSAQAPFHFWLPAAMA-APTPVSAYLHAAAMVKAGVFLVARLAPEFHGLA---MW 287 Query: 286 NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 L++ G+ ++ + + L Q D+K +LAY +V +G + V G+G A L +L Sbjct: 288 QVLVIGVGLWTLLLGGWRALRQTDVKLVLAYGTVSQLGFLMVANGLGTRDAAMAGLAMLL 347 Query: 346 NHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 H++ K LF G + + GTRDL + G+ + P A + L++AG+PP F++ Sbjct: 348 AHAVFKAPLFMIVGIIDHEAGTRDLRKLSGIGRRHPVLAAVAVAAGLSMAGLPPLFGFVA 407 Query: 406 EFMTITAGLARN-------HLLIIVLLLLLLTLVLAGLVRMAARVL------MAKPPQAV 452 + + + A +V++ L L A R + Sbjct: 408 KESVLESLAAHGAAHGGVWAWSPLVVMALGSVLTFAYTWRFLWGCFAVKRDEAGETVPET 467 Query: 453 NRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLS-GTHDLPAQRSTWHDF 511 LL ++ + +P PV I+ + + + PA + WH + Sbjct: 468 QFHTRVTTLELAPAALLALVGLVLAFLPGPVEGIITAHTGSLPPLDPAEKPAYLALWHGW 527 Query: 512 LPSGTASVSE 521 P S Sbjct: 528 TPILALSAGI 537 >UniRef50_Q6MGN7 NADH dehydrogenase I chain M n=3 Tax=Bacteria RepID=Q6MGN7_BDEBA Length = 517 Score = 328 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 104/506 (20%), Positives = 202/506 (39%), Gaps = 27/506 (5%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTV-----LHSLGITLLLILALWVVQTAAD 59 ++ + ++ PLLF+LL K + + + SL + + +Q Sbjct: 1 MILSSIVFLPLLFALLVAIWPKANTVRHLALGLSVIEFIVSLSLFKNFDASATGLQMVEK 60 Query: 60 AGEIFAAGLWL--HIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 I G+ IDG+ + + + + + S + + ++ Sbjct: 61 FMWIERFGIQYFMGIDGISLWLVLLTTFLTPIIILASWTSITE----------RVKGFHV 110 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVA 177 + ML + + + + E + + F+VGI+G + A K+ I G Sbjct: 111 CMFILQTAMLGTFLAMDAVFFYVFWELSLVPMYFMVGIWGGARRIYATVKFFIYTMAGSV 170 Query: 178 FGLFGTVLVYANA--ASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGL 235 L + + A+ A + F+ + +L L F + F K Sbjct: 171 LMLVAIIYMMYLTQEATGQMSASLLDFYQLQIPFVGGTFFSLQTLLFFAFALAFAIKVPA 230 Query: 236 FPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGML 295 FP+H WLPDAH EAP+P S +L+ V+L +R+ I + S++ L ++ G + Sbjct: 231 FPVHTWLPDAHVEAPTPGSVILAGVMLKMGTYGFMRWVIPLFPE-ASEYWAWLFMLIGTV 289 Query: 296 SVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLF 355 + A +VQ D+K+L+AYSSV +MG + + L G+ L +LNH ++ LF Sbjct: 290 GIIYGALVAMVQPDVKKLVAYSSVSHMGYILLGLFAFNAYGMGGGLYQMLNHGISTGALF 349 Query: 356 CGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLA 415 G + + +R+++ G+ ++P + F L+ +P N F+ EF + Sbjct: 350 ILIGMIYERTHSREISKYGGLAGVLPIFTIFFFIITLSSIAVPMTNGFVGEFFILLGTYQ 409 Query: 416 RNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK-----PPQAVNRGDLGWLTTSPMVILLV 470 H + + + L ++ M RV + + DL + +V L++ Sbjct: 410 A-HPVFAYFAVSGVVLGAVYMLWMFKRVFFGEQGELVKDEHHPLHDLNAREITVLVPLVI 468 Query: 471 MMLAMGTHIPQPVIRILAGASTIVLS 496 M+ MG P + + +++ Sbjct: 469 MVFWMGLF-PNHFLNFSKASIDHLVN 493 >UniRef50_D2R5F8 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5F8_9PLAN Length = 600 Score = 328 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 104/481 (21%), Positives = 191/481 (39%), Gaps = 39/481 (8%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQT------ 56 + +F + PL ++L + +A R + +L + + + Sbjct: 1 MTSLFITTVFLPLAGAILMWILAPLGKNAVRFGALGVTLATLVCTAIVVASFPADGAKGA 60 Query: 57 ---AADAGEIFAAG------LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGEL 107 D + +G L +DGLG + ++ + S ++ Sbjct: 61 EFCTVDWPWLAQSGSLLDIRFSLALDGLGLWMFGLSALLMVTAVLVSWEAIKERE----- 115 Query: 108 SPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWK 167 ++G L F L V T+ +LI+ + E T + FL+GI+G AA K Sbjct: 116 -----ALFFGMLLLLEFGCLGVFTARDLILFYVFFEFTLIPLFFLIGIWGSEDRKYAASK 170 Query: 168 YIIICTVGVAFGLFGTVLV--YANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFL 225 + + G G +++ + + + +I + + L P L F+ L Sbjct: 171 FFLYTLAGSLLTFLGLLVIVVWCYQQEGVGKLVFSIPELTATLRDAPLPPAWQLAVFIAL 230 Query: 226 LIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFP 285 GF K LFP+H WLP AH +AP+ S +L+ VLL + +R+ + + + Sbjct: 231 FAGFAIKVPLFPLHTWLPLAHVQAPTAGSVILAGVLLKIGVYGFLRFSVPMLPD-ATVTC 289 Query: 286 NRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHIL 345 LL ++ + A L Q D+KRL+AYSSV ++G + L PLG+ ++L ++ Sbjct: 290 MPYLLWLSVIGIIYGALVALAQGDMKRLIAYSSVSHLGYCTLGLFALNPLGVQGSVLQMV 349 Query: 346 NHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLS 405 NH L+ LF G + +Y TR++ + G+ + P+ + + G+P N F Sbjct: 350 NHGLSTGGLFAVIGMLYERYHTREIKQLGGLARQTPWLSFFMLIFTFSSIGLPGLNGFPG 409 Query: 406 EFMTITAGLA-----------RNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNR 454 EFM + + I VL + + L ++ + V + + Sbjct: 410 EFMILLGMFQRAWAQSSVENFSQLMTIAVLAVTGVVLGAWYMLWLVQHVFFGPLKEPADD 469 Query: 455 G 455 Sbjct: 470 H 470 >UniRef50_A0QQR3 NADH ubiquinone oxidoreductase subunit 5 n=9 Tax=Actinomycetales RepID=A0QQR3_MYCS2 Length = 993 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 114/537 (21%), Positives = 212/537 (39%), Gaps = 37/537 (6%) Query: 2 SYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALW---VVQTAA 58 S M A+LL + +L + A ++++ + + + + Sbjct: 31 DRSAMLAVLLAHAVATALAPLMVARWGRMAFFPLSLVPLGSLVWVALNWPSPDNIPTVHV 90 Query: 59 DAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGF 118 L D L + ++ IG L Y Y H E L + Sbjct: 91 SWVPELWMDFTLRFDALAAIMSVLVLAIGALVLFYCAHYFHHHDGRME---KRLPSFAAE 147 Query: 119 FHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVGVA 177 F M +V S+N++V++ E TT+ S LVG Y +R+ S AA + +++ T G Sbjct: 148 LVAFSGAMFGLVVSDNMLVLYIFWETTTVLSFLLVGHYAERATSRRAATQALLVTTFGGL 207 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 L G V++ A + + +A + T + +LIG +K+ + P Sbjct: 208 AMLTGIVVLGNMAGTYLLSELIA----------APPTGTAASVGIALILIGALSKSAIVP 257 Query: 238 MHAWLPDAHSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLS 296 MH WLP A + AP+PVSA L A ++ + ++ R + F +++ G+L+ Sbjct: 258 MHFWLPGAMA-APTPVSAYLHAAAMVKAGVYLIARMTPGF---ADTAFWRPMVIGLGLLT 313 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + +A + + + D+K +LA+ +V +GL+ V +G GGP + A L ++ H++ K LF Sbjct: 314 MLLAGWRAVREYDLKLILAFGTVSQLGLITVMVGAGGPDMMLAGLAMLIAHAMFKASLFM 373 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA---- 412 G + GTRD+ + G+ + ++ G ++A +PPF F+++ + Sbjct: 374 VVGVIDHATGTRDIRRLAGLGRAHRPLLIIALGAVASMAALPPFFGFVAKEADLETVLHS 433 Query: 413 -GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK-----PPQAVNRGDLGWLTTSPMV 466 L ++ +++ +R K + Sbjct: 434 PALGTAAPYVLTGIVVGSVFTTIYSLRFLWGAFAGKGLSGPSVRVAEMHRPPVNFLLAPA 493 Query: 467 ILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDF-LPSGTASVSEK 522 IL L G P+ + +L + V G+ + WH LP + V Sbjct: 494 ILSAAGLVFGLW-PKGLDAVLEDYADTVPGGSTY---HLALWHGVGLPLLLSIVVLA 546 >UniRef50_B9L620 NAD(P)H-quinone oxidoreductase chain 5 (NAD(P)Hdehydrogenase I, chain 5) n=1 Tax=Nautilia profundicola AmH RepID=B9L620_NAUPA Length = 617 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 115/531 (21%), Positives = 225/531 (42%), Gaps = 44/531 (8%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 + +LL P L ++L + K +++ V + + L I+ + Sbjct: 1 MNNAVLVLLCAPFLGAVLAYVLGKMKINLAFWVAEIVGAMLFLASIVIFLNYSDTPINID 60 Query: 63 I-------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 ++ID L + L I +GF ++ YM + Y Sbjct: 61 YTWIAYGDLKLPFGIYIDHLSIVMLLIATGLGFADIHFAHDYMGDDPD--------QPRY 112 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTV 174 Y F+ M+L+V + +LI + E L+S L+ + + S+ +A + + Sbjct: 113 YAKVLFFIGGMILLVITKDLIGAFVGWEFMGLASYALISFWYYKNSAADAGMQAFLYTRF 172 Query: 175 GVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 G F L L+ ++ + + L T+ L+ +F+ +G K+G Sbjct: 173 GDIFILAAIGLLVYYTGTLNLVEL------NEMANAGELPKTVALVVALFIFMGAIGKSG 226 Query: 235 LFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFG 293 FP++ WL +A E P+ VSAL+ ++N + ++ R + ++ Sbjct: 227 QFPLYPWLMNAM-EGPTTVSALIHGATMVNSGIYIVARLFDFFAYTD----ALFIVANVA 281 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 LS + A LVQ++IK++LAYS++ ++ + V LG+G + A +LH++NH++ K L Sbjct: 282 ALSAFIGASSALVQKEIKKILAYSTMSHLSIAFVGLGVGS---LAAGMLHLVNHAIFKAL 338 Query: 354 LFCGSGNVLL-KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITA 412 LF +G V+ + T+D + G++K PF A+ G+L+LAG+PPF+ + S+ + A Sbjct: 339 LFLSAGAVIYIAHHTKDAWKLGGLIKTAPFVALFMAMGSLSLAGVPPFSGYFSKEAVVAA 398 Query: 413 GLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRG----DLGWLTTSPMVIL 468 A + V + + L +A + R+ + + +P G P+ +L Sbjct: 399 AWANGNEFTKVFVTIAALLSIAYITRLWVLIFLGEPRNEDIAGSVHAPSNLWIRLPLGVL 458 Query: 469 LVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASV 519 V+ L + +L+G ++ + F+ +G + Sbjct: 459 AVVTLFISIWQAD--------IVHFILNGKEEVEPHIAGLAAFMLTGMMIL 501 >UniRef50_B6YTY8 Membrane bound hydrogenase, MbhH subunit n=9 Tax=Thermococcaceae RepID=B6YTY8_THEON Length = 532 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 126/531 (23%), Positives = 221/531 (41%), Gaps = 54/531 (10%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M+ + L++ PL + A VL S ++ + + + + Sbjct: 1 MNGEAILPYLIIIPLFGAFAMPIVNLAGKKAREAWAVLISALTFIVSSVIFYHIWNTGEI 60 Query: 61 -------------GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGEL 107 G F + +D G + + I+ + + IYSIGYM+H+ Sbjct: 61 IVYTLGAETPFGQGVDFPIRIVWEVDLFGAIMVFIVAFVSLMAVIYSIGYMKHDTG---- 116 Query: 108 SPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAW 166 L YY + ML + + +L + +E +++S LV +EA Sbjct: 117 ----LDKYYTLILILELGMLGIAITGDLFNFYVFLEIMSIASYALVAFRNDTWEGIEAGI 172 Query: 167 KYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLL 226 KY+ + ++ AF L G L+Y ++ +A + Sbjct: 173 KYMFVGSIASAFVLLGIALLYGQYGTLTMGYLAVKIVQN--------PTVTAKVALALFI 224 Query: 227 IGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCA-LLVLIRYYIIIC-------- 277 G K+G P+H WL DAH APS +SA+LS +++ + + R I Sbjct: 225 AGLLFKSGASPVHMWLADAHPAAPSSISAMLSGLVIKIGGIYAIARILFSIYTPMAHSIV 284 Query: 278 ------QAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGI 331 I +++IF L++ + ++Q D+KRLLAYSSV +G + + LGI Sbjct: 285 LEAYLQPHINMSAIGWIIIIFACLTLIIGNAMAVIQTDMKRLLAYSSVGQIGYILLGLGI 344 Query: 332 G--------GPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFT 383 G + + A+ H +NH+L K LLF +G V+ + GTR+LN + G+ K MP T Sbjct: 345 SIAAYGTQTGEIALAGAIYHTVNHALMKALLFLVAGVVIHQLGTRNLNELSGLAKTMPKT 404 Query: 384 AVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARV 443 F GA A+ GMPP N F S+++ + N +L + ++ A VR+ Sbjct: 405 TFAFLIGAAAIVGMPPLNGFASKWLIYESSAIFNPILGAIAIIGTAFCTAAY-VRVLYTF 463 Query: 444 LMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIV 494 + + D PM++L++ ++ MG Q +++ A+ ++ Sbjct: 464 FGRPSEKVMAAKDPETSMMLPMLLLVLAIIIMGLLPWQISDKVMIPAARML 514 >UniRef50_Q3AB32 Carbon monoxide-induced hydrogenase, membrane anchor subunit n=2 Tax=Clostridia RepID=Q3AB32_CARHZ Length = 1274 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 133/499 (26%), Positives = 227/499 (45%), Gaps = 46/499 (9%) Query: 10 LLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLW 69 L+L P + + + + + V + L LA Sbjct: 241 LVLVPYVGGFIVYLAGCFSQALRNILAVGITGTTVYLTWLAG------------------ 282 Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 + D L F ++ IGFL +YS+GY + + Y+ F L L T+L + Sbjct: 283 -NFDSLSKFFALLMAFIGFLVTLYSVGYFKAKPYAN--------RYFFFLLLMLGTLLGL 333 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 TS L + E T +S FLV + +L A +KY I+CT G L + ++ Sbjct: 334 TTSKELGNFYVFWELMTWTSYFLVIQEQTQKALRAGFKYFIMCTSGAYIMLLAILTLHVK 393 Query: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEA 249 S+ A +L P LML+ +IGFG K GL P+H+WLPDAH A Sbjct: 394 LGSLDLTTISANL--------QVLSPGLMLVVLGMFIIGFGVKAGLVPLHSWLPDAHPVA 445 Query: 250 PSPVSALLSAVLLNCALLVLIRYYIIICQAIG---------SDFPNRLLLIFGMLSVAVA 300 PS +SA +S +L + L+R ++ ++ + G ++ Sbjct: 446 PSSISAPMSGILTKTGIYGLVRILFVVFGVSLLTKVGTTGQFSTIGFIISLLGAFTLLYG 505 Query: 301 AFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGN 360 L+Q D+K++LAYS++ +G + + LG+G L AL HILNH++ K LLF G Sbjct: 506 EIMALLQTDVKKMLAYSTMAQVGEIVITLGVGTYLSFIGALYHILNHAIMKNLLFLAVGA 565 Query: 361 VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLL 420 ++L+ ++++N + G+ ++MP T++ F G LA+ G+PPFN F+S+F+ + A + HL Sbjct: 566 LILRVKSQEINKLKGIGRVMPVTSLCFSIGILAIMGLPPFNGFISKFLMLYALVQSGHLA 625 Query: 421 IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIP 480 + L+LL L +++ + K + P+VIL + + G + P Sbjct: 626 LAGLILLGSILGGFYYLKVVRIIFFEKYEGPAR-QEAPITMLIPIVILTGLSIFNGVY-P 683 Query: 481 QPVIRILAGASTIVLSGTH 499 Q + ++ + ++ + H Sbjct: 684 QAGLALIKPVADLIAANGH 702 Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats. Identities = 127/503 (25%), Positives = 218/503 (43%), Gaps = 57/503 (11%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 ++ + ++ L P++ +L + +R + + + V + + A Sbjct: 711 ITISWPIVTLIPMVGALFAYFFGRRSVKVSGWLAVATMVATLATVFAASTG--------- 761 Query: 63 IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 +D F ++ IG L +YS+GYM HE A +Y FF L Sbjct: 762 ---------LDIFSRSFAFLIAFIGVLNLLYSLGYMEHEHAQN--------RFYLFFTLM 804 Query: 123 LFTMLLVVTSNNLIVMWAAIEATT-LSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLF 181 + +L V S +L +A E + + F++ +L +KY I VG L Sbjct: 805 IGGLLGVAVSKDLFNFFAFWEIMSSWTLYFVIIHEETSEALREGFKYFIFNYVGANLLLL 864 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM--- 238 G +++ NA + + S L L+ L + +LIGF K + P Sbjct: 865 GLLVLTVNAGTFEMSELAG--------RLSALPTGLVALGLILMLIGFAMKAAMLPFRID 916 Query: 239 ---HAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIG---------SDFPN 286 H AP+PVS +S+VLL A +++ + + Sbjct: 917 YQMHP------PTAPTPVSGYISSVLLKSAPFGMVKLFYVFGGVALLSKLGQLGDMPSLM 970 Query: 287 RLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILN 346 +L L++ +AA L+Q +KRLL Y +V MG + + + +G LG+ LLH++N Sbjct: 971 YILAWVSGLTILMAAALALLQSGMKRLLIYHTVSQMGYIILGISLGSSLGLAGGLLHLVN 1030 Query: 347 HSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSE 406 H L K LLF +G +++K G DL+ + G+ + MP T +F G ++AG+PPFN F S+ Sbjct: 1031 HMLFKNLLFLVAGAIMVKTGIGDLDRLGGIGRKMPVTLSVFAIGTFSIAGIPPFNGFTSK 1090 Query: 407 FMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK-PPQAVNRGDLGWLTTSPM 465 ++ A + + ++ + +L LL L LA ++ + P + N + W PM Sbjct: 1091 WLIYEASMEKGYVFLALLSLLASVLTLASFLKFLHSAFFGQIPKELENVTEAPWTMQIPM 1150 Query: 466 VILLVMMLAMGTHIPQPVIRILA 488 VIL V+ + G P+ I A Sbjct: 1151 VILAVLCMVFGIFPGIPLATIAA 1173 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 8/234 (3%) Query: 290 LIFGMLSVAVAAFFILVQ-RDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 +FG++ + V L++ +++ + L SS+ +G V + LG G +G ALLH+ Sbjct: 14 ALFGVMLLLVGELVALLRWKNLIQFLIISSIAEIGFVLLGLGTGTYVGTSGALLHLEYQI 73 Query: 349 LAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 + + L+F + + + + + + G+ + MP T LFG G ++ G+ PF +S+F+ Sbjct: 74 VMRGLVFLAAAAFIFRGHSASVEKLQGIGRKMPVTTTLFGFGLFSVMGLSPFKGSISKFL 133 Query: 409 TITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP----PQAVNRGDLGWLTTSP 464 I A + H L + + +++ + P P A + + Sbjct: 134 IIYAAIESGHWLSAAIATFGSIIEAVYFLQVFQILCFEDPVQEGPGAEEVRETSPGLMAV 193 Query: 465 MVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHD--LPAQRSTWHDFLPSGT 516 +++L V+ MG IP+P I A+ ++L GT LP S W + Sbjct: 194 LLVLGVLTALMGL-IPEPFIHGAERAAAVLLGGTGPDQLPVFESPWSSLVLVPY 246 >UniRef50_B1I6I5 NADH-quinone oxidoreductase subunit N n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=NUON_DESAP Length = 501 Score = 328 bits (841), Expect = 3e-88, Method: Composition-based stats. Identities = 125/507 (24%), Positives = 225/507 (44%), Gaps = 34/507 (6%) Query: 4 SVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLH------SLGITLLLILALWVVQTA 57 + + L+++ PL ++ + + TR + S + L L Sbjct: 3 AHLPILIVIIPLFVAMAARLLVRLSVPFTRGFVLAAALAVLASGAVALAETLVRGEPWRY 62 Query: 58 ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 +G G+ L ID L G + ++ G +Y+ Y++ +P +Y Sbjct: 63 YVSGWPPPWGIELVIDPLAGGLIVLVAFFGLAALVYAGPYLQGR------TPREQGSFYA 116 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVA 177 F L +L + + +L ++ +E ++L++ L+ G R S+ AA +Y+II T Sbjct: 117 LFLLAKAGLLGMCATGDLFNLYVFLEISSLAAYALIAF-GGRRSIVAALRYLIIGTAAAC 175 Query: 178 FGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFP 237 F L G +YA S+ + L+D +++LA VF++ G G K LFP Sbjct: 176 FYLLGVGYLYAMTGSLNMADLAVLL-------PPLMDSPVVILALVFIVAGLGIKMALFP 228 Query: 238 MHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGS-DFPNRLLLIFGMLS 296 +H WLPDA+S P+PV A ++AV+ + L R + +A G ++L Sbjct: 229 LHGWLPDAYSYTPAPVLAFMAAVMTKVSAYALYRILYFVTEAAGPVSPTLQVLGWMAAAG 288 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + + + QRD+ R+LAYSSV +G + + L +G L ++ ALLH+L+H+L K LF Sbjct: 289 ILFGSIMAIAQRDLWRMLAYSSVAQVGYIVLGLAVGNVLALYGALLHVLSHALVKGGLFF 348 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 +G V + G R ++ G+ K MP T F AL++ G+PP F S++ + L Sbjct: 349 IAGGVSWETGVRRVSDFVGIAKKMPLTMGAFVAAALSMIGLPPTLGFFSKWYLVLGCLEA 408 Query: 417 NHLLIIVLLLLLLTLVLAGLVRMAARVLMA-------------KPPQAVNRGDLGWLTTS 463 + + +L++ L R+ + P R +L Sbjct: 409 GAWVFVAVLVVSSLLTAVYFFRVIENAYLKGLPQPGARAERPVPPGARRFRLELPASMLV 468 Query: 464 PMVILLVMMLAMGTHIPQPVIRILAGA 490 P+++L + ++ +G Q + ++ A Sbjct: 469 PILVLGIGVVVLGLFNEQIISNVIQYA 495 >UniRef50_Q67P11 NADH dehydrogenase I subunit L n=1 Tax=Symbiobacterium thermophilum RepID=Q67P11_SYMTH Length = 640 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 123/513 (23%), Positives = 201/513 (39%), Gaps = 60/513 (11%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA-------- 57 M +++ PLL + + R + + S+ I+ L +A+ Sbjct: 1 MLPAIVVVPLLSAAIVGYFRNTWSKSLVSWVACGSVAISFALTVAVAAQYWGGGAVAPIR 60 Query: 58 -ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYY 116 A L L DGL + ++ G L IYS YMR + ++G + Sbjct: 61 SALTSWGSLLDLGLVADGLSLWWALVVTGAGLLIHIYSTAYMREDESYG--------RFM 112 Query: 117 GFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTVG 175 + F+F M L+V S+N + + L+S L+G Y R + AA K ++ +G Sbjct: 113 AKMNFFIFAMTLLVLSDNFVGLAMGWGCVGLASYMLIGFYFTRPGAQNAAIKAFVMNIIG 172 Query: 176 VAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGL 235 A G +YAN S + S+L L+LL K+ Sbjct: 173 EAGLFAGIAFIYANFGSFKFDDVFGAIAQGPVSASALNLIGLLLLIGA------AAKSAQ 226 Query: 236 FPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGM 294 P+H WLP A E P+PVSAL+ A ++ + ++ R Y I A G+ + G Sbjct: 227 LPLHTWLPYAM-EGPTPVSALIHAATMVTAGVYLVSRAYPIYEVATGAAMA---VAWIGG 282 Query: 295 LSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLL 354 L A Q DIKR+LA+S++ +G + + G+G AA H H+ K L Sbjct: 283 LGALFGALVAAGQFDIKRVLAFSTLSQIGYMFLANGLG---AYVAADFHFFTHAFFKACL 339 Query: 355 FCGSGNVLLKYG-TRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 F +G V+ YG +D+ + G+ F + FG ALAL G+PPF F S+ + A Sbjct: 340 FLAAGIVVHHYGGDQDIRHMGGLWYRDRFAGLTFGAAALALIGLPPFAGFFSKDEILLAA 399 Query: 414 LARNHLLIIVLLLLLLTLVLAGLVRMAARVLMA----KPPQAVNRGDL------------ 457 ++ + + ++ L VR+ + V + P + + Sbjct: 400 YSQGQWALFAIAIVAAGLTAFYNVRLFSLVFLGDAYVPPAKPAGKKRSRAQAAAEEAAHA 459 Query: 458 -----------GWLTTSPMVILLVMMLAMGTHI 479 P+ IL V+ + G Sbjct: 460 HGHSHGHDHATPAAMKWPVAILAVLSVVSGWLF 492 >UniRef50_B4U8H9 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=Aquificaceae RepID=B4U8H9_HYDS0 Length = 633 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 116/501 (23%), Positives = 225/501 (44%), Gaps = 36/501 (7%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFA 65 M +L+LL PLL + +R V + ++ ++ L + + + Sbjct: 1 MQSLILLFPLLSFITIGLFGRRIGDFASGVINAGAGVLSFIVALITMLSMKGPEDIVFYK 60 Query: 66 A--------GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 + ++ID L + + + +Y+IGYMR+ + ++ Sbjct: 61 FLPISNTSVDIGIYIDKLSITTTVTVTFVASVIFVYAIGYMRYLFGNWTFK------FFA 114 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVG-IYGQRSSLEAAWKYIIICTVGV 176 +F LFLF+MLL++ ++LI+M+ E L+S L+G + ++ + +A+ + ++ +G Sbjct: 115 YFSLFLFSMLLILLGDSLILMFFGWEGVGLASYLLIGYFHEEKFATKASLEAFVMNRIGD 174 Query: 177 AFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLF 236 + G + + ++ + LA + L G K+G Sbjct: 175 WSFILGIIYTFWLFGTLSLPKLFENASYV----------PGITLATLLLFGGAVGKSGQI 224 Query: 237 PMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGML 295 P+H WLP+A + P+PVSALL A ++ + ++ R Y I S + I G++ Sbjct: 225 PLHTWLPNAMA-GPTPVSALLHAATMVAAGVYMVARLYPIF---SLSPTTLSYITITGVV 280 Query: 296 SVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLF 355 ++ AA V DIK+++A+S++ + ++ LG+ P AA+ H+ H+ K LLF Sbjct: 281 TMLFAALVATVHDDIKKIIAFSTMSQLAIMFTALGMRFP---TAAIFHLTTHAFFKALLF 337 Query: 356 CGSGNVL--LKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 +G V+ L + T+++ + G+ K MP T F GALAL+G PPF + S+ + + Sbjct: 338 LAAGAVITGLHHHTQNIFEMGGIKKYMPITFGAFMIGALALSGFPPFAGYFSKDAIV-SL 396 Query: 414 LARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMML 473 + + L+ L+L+ L + R A V + + ++ + + PM+IL + L Sbjct: 397 IMDKNTLVATLILITSLLTAYYITREAFVVFLGEGHYHEEPHEVEPIMSFPMLILSFLSL 456 Query: 474 AMGTHIPQPVIRILAGASTIV 494 G + + + Sbjct: 457 MGGFLLWNYFSYMNSPIEAPF 477 >UniRef50_C0A4J1 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A4J1_9BACT Length = 672 Score = 327 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 119/501 (23%), Positives = 210/501 (41%), Gaps = 38/501 (7%) Query: 7 FALLLLTPLLFSLLCFACRKRRL---------SATRTVTVLHSLGITLLLILALWVVQTA 57 L+ PL ++ R A V SL L A Sbjct: 8 LWLIPALPLAACVIGVFTSARSRLASTAALAAMAAAFVVSCLSLREALASPAAHATATLD 67 Query: 58 ADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYG 117 L L +D L L ++ +GFL ++S GYM+ + +G+ ++ Sbjct: 68 WINAGALKLPLSLLLDPLTAFMLVMVTFVGFLIFLFSTGYMKDDPRYGK--------FFC 119 Query: 118 FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKY-IIICTVGV 176 + LF ML ++ SN+L++++ E L+S L+G + ++ S AA K I+ +G Sbjct: 120 YLSLFAAAMLGLLISNSLLLLFVCWELVGLASYLLIGFWFEKPSAAAAAKKAFIVTRIGD 179 Query: 177 AFGLFGTVLVYANAASVMPQAEMAIFW-----SEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 L G + +++ +++ A F + + + + + G Sbjct: 180 LGFLLGILWLHSATDTLLFYDNGAGFLETTQLGSLAALALPGGLAVSTAIGLLIFCGAVG 239 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+G FP+H WLPDA E P+PVSAL+ A ++ + ++ R ++ ++ Sbjct: 240 KSGQFPLHVWLPDAM-EGPTPVSALIHAATMVAAGVFLMARIQPLLTPD-----ALAVIA 293 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 G ++ A Q DIKR+LAYS+V +G + + +G+G AA+ H+L H+ Sbjct: 294 TIGAITALFGAILATAQNDIKRVLAYSTVSQLGYMMLAIGVG---AWPAAIFHLLTHAFF 350 Query: 351 KTLLFCGSGNVLL-KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPP-FNIFLSEFM 408 K LLF G+G+V+ + +D+ + G+ M T F G +ALAG+P F+ F ++ Sbjct: 351 KALLFLGAGSVIHAAHHEQDIRKLGGLAPRMKLTFATFAIGMMALAGVPFVFSGFWAKEA 410 Query: 409 TITAGLARN-HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDL--GWLTTSPM 465 + A L + L + L + R + K P R T P+ Sbjct: 411 ILHGAHAWPVSQLPFLTALATVILTAFYMTAPRRRGVYGKTPHPRRRTRARNPLSMTLPL 470 Query: 466 VILLVMMLAMGTHIPQPVIRI 486 V+L + +A+G + Sbjct: 471 VLLAICAIALGFLGTPAWPWL 491 >UniRef50_B8DNI8 NADH dehydrogenase (Quinone) n=4 Tax=Desulfovibrio vulgaris RepID=B8DNI8_DESVM Length = 1264 Score = 327 bits (839), Expect = 7e-88, Method: Composition-based stats. Identities = 127/519 (24%), Positives = 214/519 (41%), Gaps = 51/519 (9%) Query: 12 LTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLH 71 L P + + A V+ L Sbjct: 237 LVPYAGAFAVWCIGLASGRARALAGVVLVAASVALTWTDTT------------------- 277 Query: 72 IDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVT 131 ID L LF I+ IG + +YS GY+ H+ Y+ F L ++ + Sbjct: 278 IDPLSRLFGVIIAGIGLVVAVYSTGYIHHD--------RRAGGYWFFLLLMCGSLSGLAL 329 Query: 132 SNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAA 191 + + + E T SS FLV + AA KY ++C G L G +L+ A A Sbjct: 330 ARDFGGFYVFWELMTFSSYFLVAHEATDKAFHAAVKYFVMCVAGACAMLPGFMLLSAQAG 389 Query: 192 SVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPS 251 ++ A + + ++ A V +GF K GL P H WLPDAH APS Sbjct: 390 TLDFAALAGLAATLPA--------PVVKGAVVLAFVGFAVKAGLVPGHGWLPDAHPAAPS 441 Query: 252 PVSALLSAVLLNCALLVLIRYYIIICQAI----------GSDFPNRLLLIFGMLSVAVAA 301 +S LS +L + +R + + + G L+ G ++ Sbjct: 442 SISGPLSGILTKTGVYGTVRLMLAVFGSAVLLKAGESAGGFSSMGLLVTALGTATMLYGE 501 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNV 361 L Q D+KRLLAYS++ +G + + +G+G L +LLH+LNH++ K LLF +G + Sbjct: 502 LMALKQDDLKRLLAYSTMGQVGEIFMVIGLGTWLATTGSLLHVLNHAIMKNLLFLCAGGL 561 Query: 362 LLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLI 421 +L+ G++ L + GM ++MPFTA G +++ G+PPFN F+ +++ + A +A H + Sbjct: 562 ILRAGSKKLADLAGMARVMPFTAGCMVVGLISIMGLPPFNGFVGKYLMLQALVAAGHPAV 621 Query: 422 IVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQ 481 +LLL +R+ ++ +P + +L + L +G +PQ Sbjct: 622 AAVLLLGSLAGCVYYMRIVRTLVF-QPYTGPMVQEAPVSMRVATGVLAALCLVLGV-LPQ 679 Query: 482 PVIRILAGASTIVLS----GTHDLPAQRSTWHDFLPSGT 516 + ++ + ++ LP TWH F+ Sbjct: 680 LGLSLVTPVADMLAGAGKLDAQALPMLAVTWHPFVLVPM 718 Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats. Identities = 118/488 (24%), Positives = 213/488 (43%), Gaps = 46/488 (9%) Query: 10 LLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLW 69 +L P+L +++ F R+ R +A + + ++ +++ Sbjct: 713 FVLVPMLGAVVPFLLRRDRKAAGLSTAITLAVAAIAVVVFGRG----------------- 755 Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 +D + F ++ VIG L Y++GYM H T +Y FF + ++ V Sbjct: 756 --LDSISFAFALVVPVIGCLNMFYAVGYMEH--------SHTQWRFYTFFLFMVGGLMGV 805 Query: 130 VTSNNLIVMWAAIEATT-LSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYA 188 SN+L + E + S F++ ++L +KY +G AF G V++ + Sbjct: 806 AASNDLFGFFTFWEIMSSWSLYFVIVHEENPAALREGFKYFFFNVLGAAFLFLGVVMLSS 865 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 A A + + L A + IGF K P + + Sbjct: 866 MAGDPSFGAVRSAL--------PTMPVALAATAVALMAIGFTMKAAQLPFRIDVQMHPAT 917 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQAI---------GSDFPNRLLLIFGMLSVAV 299 AP+PVS +S+VLL AL L + + ++ A G + G +++ + Sbjct: 918 APTPVSGYISSVLLKSALFGLAKLFFVLGGAGFFTGLASQWGQPQVMYAIAWVGGITIVM 977 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 AA ++Q D+K +L YS+V +G + V + +G PLG+ +LH++NH L K LLF +G Sbjct: 978 AALLAVMQSDLKLVLIYSTVSQLGYMVVGVALGTPLGMAGGMLHLVNHVLFKDLLFLVAG 1037 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 +++L L+ + G+ + MP T +F GAL++ G+PP N F S+++ A +A + Sbjct: 1038 SLILCTHKHSLDELGGIGQRMPVTLTMFAIGALSVVGVPPTNGFASKWILYHALMAEGEV 1097 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLMAKP-PQAVNRGDLGWLTTSPMVILLVMMLAMGTH 478 + +L L L LA + + +P P+ + + + PM IL + G Sbjct: 1098 ALALLSLAGSVLTLAYFAKFLHSAFLGRPSPELAHVHEAPRIMLVPMGILAAGCIITGVF 1157 Query: 479 IPQPVIRI 486 P++ I Sbjct: 1158 PGLPLLAI 1165 >UniRef50_Q1PZK0 Similar to membrane-bound [NiFe]-hydrogenase-3, subunit C n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZK0_9BACT Length = 678 Score = 327 bits (839), Expect = 7e-88, Method: Composition-based stats. Identities = 132/523 (25%), Positives = 235/523 (44%), Gaps = 41/523 (7%) Query: 5 VMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIF 64 +F + ++ + +L K + + ++ ++L++ V+ F Sbjct: 4 HLFVISIILYAIGALFALCFFKWQAVGNYISLICAAIASCFSIVLSISVLTNGLIIHFDF 63 Query: 65 AA-----GLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 +D L F+ ++ VIGF+ IYS+GY + V + + + Sbjct: 64 LIYHAIIRYNFLLDPLSSFFMLVISVIGFVASIYSMGYTKLYVNKRDTRFLGFA-----Y 118 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYIIICTVGVAF 178 +L L +MLLVVT+NN +V E TL S FLV + ++ +A + Y+++ +G Sbjct: 119 NLLLVSMLLVVTANNALVFMIVWELMTLVSFFLVIFEHENPTNRKAGYVYLVMSHIGAGL 178 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 +++A A + + + + P + F ++IGFG K G+FP+ Sbjct: 179 IAVAFFIMFAYAG-----EAFTFSFDDFRHIGAHMPPIYKNIVFFLIIIGFGIKAGIFPL 233 Query: 239 HAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 H WLP AH APS VS ++S V++ A+ IR+Y + ++L+ G S Sbjct: 234 HLWLPMAHPAAPSNVSMVMSGVMIKTAIYGFIRFYFEFL-TPCPPWWGFIVLVAGASSAI 292 Query: 299 VAAFFILVQRDIKRLLAYSSVEN-----------MGLVAVELGIGGPLGIFAALLHILNH 347 + + L++RDIK LLAYSSVEN M + L L + A L H++NH Sbjct: 293 LGILYALMERDIKTLLAYSSVENIGIILIGIGLSMIFKSYNLMTLSSLAMMAGLYHLINH 352 Query: 348 SLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 ++ K LLF +GN+ T+++ + G++K + TA LF GAL+++ +PP N F+SE+ Sbjct: 353 AVFKCLLFGCAGNIYYSTHTKNIEELGGLIKRLRVTAPLFLVGALSISAIPPLNGFMSEW 412 Query: 408 MTITAGLARNHL----------LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV--NRG 455 + + L ++ + ++ L LV V+ +A P Sbjct: 413 LIFQSLLNGFYIPSVFFKVMTVICGAIVALTGALVAMCFVKAFGVSFLALPRSEHTRKAK 472 Query: 456 DLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGT 498 ++ + M IL M + MG P ++ + +T +L Sbjct: 473 EVPLVMLVSMGILASMCVFMGLF-PATIMATINQVNTHLLGTN 514 >UniRef50_B1ZSE3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSE3_OPITP Length = 683 Score = 327 bits (839), Expect = 7e-88, Method: Composition-based stats. Identities = 132/525 (25%), Positives = 214/525 (40%), Gaps = 49/525 (9%) Query: 16 LFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGL------- 68 ++ RR V L ++A + + Sbjct: 18 AAGVVLALLCVRRERLAALVGFGAPALAALAGLVAALRLLLGGVGAPLPRFEFIPPLFPF 77 Query: 69 ---WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFT 125 + +D LG FL + + G IYSIG + G + + + L Sbjct: 78 LTLTVRVDALGAFFLVVSSLAGLAISIYSIGAAKGLAGRGNVGVLAALF-----NALLLA 132 Query: 126 MLLVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGLFGTV 184 LV + +L + A E L++ LV + Q + A Y I+ + A + G + Sbjct: 133 TALVFMAGDLWLFLGAWELMALTAYGLVSFAHEQPETRRAGVLYFIMSHLDAACVVLGLL 192 Query: 185 LVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 L++ + S + AI + P AFV L+GFG K G+ P+H WLP Sbjct: 193 LLFQASGSTSFDSLHAI--------GGHMAPGKRDAAFVLFLLGFGIKAGIVPLHIWLPA 244 Query: 245 AHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFI 304 AH APS VSA +S VL+ + LIR + +L+ G +S + + Sbjct: 245 AHPVAPSNVSAFMSGVLIKSGIYGLIRVSFDFLGTPPG-WWGMTVLVIGTVSAVLGVLYA 303 Query: 305 LVQRDIKRLLAYSSVENMGLVAVELG-----------IGGPLGIFAALLHILNHSLAKTL 353 L++ D+KRLLAY S+EN+G++ + +G L + A L H +NH+ K L Sbjct: 304 LMEHDLKRLLAYHSIENIGIILMGVGTSLLFLHSGHTALATLALIAGLYHTINHATFKGL 363 Query: 354 LFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAG 413 LF G+G VL T ++ + G+ K MP TA F GA+A++ +PP N F+SE++T + Sbjct: 364 LFLGAGAVLHATHTHNMEEMGGLAKRMPQTAFCFLIGAVAISALPPLNGFVSEWLTYQSL 423 Query: 414 LARN----------HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRG--DLGWLT 461 L L +L L L A V+ +A+P + G + Sbjct: 424 LQGFDASQSLERLVLPLSGAMLALTGALAAACFVKAYGVTFLAQPRSEAAAHAQEAGPML 483 Query: 462 TSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRS 506 M +L+V + +G P VIR+L + ++ + Sbjct: 484 RFGMAVLVVACVLLGLF-PTTVIRLLDPVTQLLTGQQLSGQLSLA 527 >UniRef50_A9A3Z7 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Thaumarchaeota RepID=A9A3Z7_NITMS Length = 692 Score = 327 bits (839), Expect = 7e-88, Method: Composition-based stats. Identities = 110/518 (21%), Positives = 206/518 (39%), Gaps = 61/518 (11%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITL----LLILALWVVQTAADAGEI 63 L+ + P +L+ K AT V V +L L LL +A+ + I Sbjct: 18 WLVWILPFAAALIMPGIGKISKRATGYVAVGFALMSALSAASLLPVAIEASEIHHQIMWI 77 Query: 64 FAAGL--WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 A GL + D L + ++ I FL IYS GYM+ + + ++ + Sbjct: 78 EAIGLKGGVLADPLSVIMANVVAWISFLIMIYSTGYMKGDKD--------ITRFWFWMMF 129 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE------------------ 163 F+ +M ++V S+NL+ ++ E L+S L+ + + + Sbjct: 130 FIGSMQIIVLSDNLLQVFFGWEGVGLASYALISFWYRDKKKDHVGQEGRTVLGLLDYYAP 189 Query: 164 --AAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLA 221 A K I+ VG + G +L++ A + + M + + +++ A Sbjct: 190 THAGMKAFIMTKVGDVMMIAGMLLIFLFAGTFGFKELMGDHEWAIAMNAQ----GMLVPA 245 Query: 222 FVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAI 280 FV L G K+ FP++ WL +A + P+ VSAL+ A ++ + ++ R I+ Sbjct: 246 FVLLFGGAIGKSAQFPLNEWLLEAMT-GPTAVSALIHAATMVKAGVFLVARIGPIVFALG 304 Query: 281 GSDF----PNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGG--- 333 + ++ G ++ + A +V +IK++LAYS+ +G + + LG+ G Sbjct: 305 AAGIMADQFFEIVAWVGAITALLLATQGMVNPEIKKVLAYSTGSQIGYMMMALGVAGLSH 364 Query: 334 --PLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGA 391 G A H+++H++ K LF +G++L G+R + + G+ K M T Sbjct: 365 QYVDGYTAGFFHLISHAMFKASLFMAAGSLLHIVGSRFMTDMGGLRKHMKKTYAFMWAAG 424 Query: 392 LALAGMPP-FNIFLSEFMTITAGLARNHLL---IIVLLLLLLTLVLAGLVRMAARVLMAK 447 L L G P F S+ A + + + +L + RM V Sbjct: 425 LGLMGAPFITTGFWSKDAIFAAVYTSGNEWALPLFAIAVLTAIITAFYTTRMIGMVFFGN 484 Query: 448 --------PPQAVNRGDLGWLTTSPMVILLVMMLAMGT 477 + + + +P IL V+ + +G Sbjct: 485 KSKHIQKMEEEGHHIHEASLSMWAPYGILAVLTIGIGL 522 >UniRef50_A8H7R2 NADH dehydrogenase (Quinone) n=8 Tax=Proteobacteria RepID=A8H7R2_SHEPA Length = 492 Score = 327 bits (838), Expect = 8e-88, Method: Composition-based stats. Identities = 120/482 (24%), Positives = 213/482 (44%), Gaps = 19/482 (3%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLH---SLGITLLLILALWVVQTAAD 59 + + L ++ PL+ + LC+ + RL + V I LL + Sbjct: 2 LAHLPILQVIVPLMAAPLCWFLDRSRLVWLFALLVSGFSCLTSIALLQQVMSSGTILYQL 61 Query: 60 AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 G G+ ID L L L I+ I + + ++ E+ + Sbjct: 62 GGWDAPWGIEYRIDELNALLLLIISTISTIVLFAAQTSLQKELPKERHTLFYSLY----- 116 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFG 179 L L M +V + +L ++ +E ++LS L+ + R +L AA++Y+I+ T+G F Sbjct: 117 LLSLTGMFGIVATGDLFNVFVFLEISSLSGYALIALGKDRRALWAAYQYLIMGTIGATFI 176 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L G L+Y ++ + + AF FL++G K LFP+H Sbjct: 177 LIGIGLLYQMTGTLNMDDLANRLPEVDQTR-------TVFAAFAFLIVGVCLKLALFPLH 229 Query: 240 AWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRL---LLIFGMLS 296 WLP+A++ APS V+A L+A A+ +LIR+ I S L ++ G++ Sbjct: 230 LWLPNAYAYAPSIVTAFLAATATKVAVYLLIRFTYTIFGIELSFSILPLQNLFMVLGLVG 289 Query: 297 VAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFC 356 + A+ + + ++K + AYSS+ +G + + I P G+ A LLH+ NH+L K+ LF Sbjct: 290 IFAASTAAIYKTNVKHIFAYSSIAQVGYMIIGYAINTPTGLMATLLHLFNHALMKSALFL 349 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 G V+ + G+ L+ G+ + MP T G L+L G+P F+S++ + A + Sbjct: 350 ALGAVMYRIGSVQLSQFQGLGRQMPLTMAAIVVGGLSLIGVPLTVGFISKWYLLIAAVEA 409 Query: 417 NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP-PQAVNRGDLGWLTTSPMVILLVMMLAM 475 + VL+LL L + + R+ P P + W P+ +L++ + Sbjct: 410 GMWPVAVLVLLGSLLAVLYIWRIVEIAYFKPPVPGREPVKEAPWTFLVPIWVLVLANIYF 469 Query: 476 GT 477 G Sbjct: 470 GI 471 >UniRef50_Q2S2L1 NADH dehydrogenase i, m subunit n=7 Tax=Bacteria RepID=Q2S2L1_SALRD Length = 545 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 117/520 (22%), Positives = 212/520 (40%), Gaps = 31/520 (5%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M+ + +L++ P +LL R+ + + + + + + Sbjct: 2 MNIPYLTSLVVFLPAAGALLTLFLRRASAIRWTALATTTVTFVLSIGLFVGYDPSVSTAL 61 Query: 61 GEIFA------------AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 G A ++ +DGL L + + ++G + + S Y+ + Sbjct: 62 GPQLADVWAGWLPDGYDVKYFVGVDGLSLLLVMLTTLLGPIVVLSSWTYIGEKH------ 115 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKY 168 YY L + V TS +L++ + E T + F++GI+G + + AA K+ Sbjct: 116 ----KGYYALLLLLQTGITGVFTSFDLLLFYIFFELTLIPMYFIIGIWGGKERIYAAVKF 171 Query: 169 IIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIG 228 +I VG L G + + A + W +L+ + + + F Sbjct: 172 VIYTLVGSLLMLVGILYLGYAAGDAVNNGVFTTDWYTLLEYN--IPLAVQGWLFAVFAFS 229 Query: 229 FGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRL 288 F K LFP+H WLPDAH +AP+ S +L+ VLL L+R+ + + + + L Sbjct: 230 FAIKVPLFPLHTWLPDAHVQAPTGGSVILAGVLLKMGTYGLLRFCLPLFPNVAQSYAG-L 288 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 + ++ + A VQ D K L+AYSS+ ++G V + L + A++ ++NH Sbjct: 289 FAVIAIIGIIYGALVARVQDDAKSLVAYSSISHLGFVVLGLFAFTTEAMQGAMIQMVNHG 348 Query: 349 LAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFM 408 L+ LF G + + TR ++ G+ +P L LA AG+P N F+ EF+ Sbjct: 349 LSTGALFLLVGMLYERRHTRLMDDYGGLATSVPVLTTLMVISVLASAGLPGLNGFVGEFL 408 Query: 409 TITAGLAR---NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRG--DLGWLTTS 463 + + ++I + L L+ M R + A N DL Sbjct: 409 ILLGSFKSTVIDSPVLIAFATTGVILAAMYLLHMVYRTFFGELTDAANAQMADLNAREFG 468 Query: 464 PMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPA 503 MV L+V+M +G + P P +R A + +L + A Sbjct: 469 LMVPLIVLMFVLGFY-PGPFLRQTAPTTEFLLETVEEKRA 507 >UniRef50_A0RMD9 NADH-quinone oxidoreductase chain l n=2 Tax=Campylobacter fetus RepID=A0RMD9_CAMFF Length = 603 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 110/521 (21%), Positives = 223/521 (42%), Gaps = 41/521 (7%) Query: 5 VMFALLLLTPLLFSLLCFA--CRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 ++ ++++L P++ S+L + L ++ + + + + ++ + Sbjct: 1 MLVSIVVLAPIIGSILLGLTYLARNTLKISQLGFAFLGMAAPITSFVCMTILFLNSQIEP 60 Query: 63 I------------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPV 110 I F + ++D L L + +G L +YSIGYM ++ G+ Sbjct: 61 INLNMFGWIEAGIFKIDVGFYLDHLSLLMGLFVTFLGMLIHLYSIGYMDKDIGFGK---- 116 Query: 111 TLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQ-RSSLEAAWKYI 169 ++ + +LFL +ML++V +NN ++M+ E S L+ Y + +++A K Sbjct: 117 ----FFCYMNLFLGSMLILVLANNPVLMFVGWEGVGACSYLLISFYFSSKDNVKAGNKAF 172 Query: 170 IICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGF 229 I+ +G + G V +Y + + + K + L+ L + + G Sbjct: 173 ILNRIGDFGFVIGLVSLYLAT------SPYGFNYEILAKSAPLIPSNLAIFIAFCFICGA 226 Query: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLIRYYIIICQAIGSDFPNRL 288 K+ P++ WLPDA + P+P+SAL+ A ++ + +++R+ + +F + Sbjct: 227 LAKSAQIPLYTWLPDAMA-GPTPISALIHAATMVTAGVYMVVRFGFLYEHL---NFVLEI 282 Query: 289 LLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHS 348 L I G+ S AA + DIK++LAYS++ +G + L AAL H+ H Sbjct: 283 LAIIGVASALFAAIIAVKATDIKKILAYSTMSQLGYMFAGLSFSS----QAALYHLFTHG 338 Query: 349 LAKTLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 K LLF G+G+V++ + +++ + + K G+LA++G+ PF F S+ Sbjct: 339 FFKALLFLGAGSVIIALHHEQNIFKMGSLHKN-KVLFYPMLFGSLAISGVFPFAGFFSKD 397 Query: 408 MTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVI 467 I H I +LL L + R+ V ++ +A + L + + VI Sbjct: 398 ALILGAFLSGHYFISGVLLFTAGLTSYYIFRLFFLVFYSQN-EAPKQHKLPFTMSFVNVI 456 Query: 468 LLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTW 508 L + L G + ++ + I+ + + Sbjct: 457 LAIFSLIGGGMAMFLSLEHVSLSVEIIAGVVSLFISFLGIF 497 >UniRef50_Q6UVP8 NADH-ubiquinone oxidoreductase chain 5 n=33 Tax=Eukaryota RepID=Q6UVP8_PSEAK Length = 689 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 112/529 (21%), Positives = 200/529 (37%), Gaps = 63/529 (11%) Query: 6 MFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGI-----------TLLLILALWVV 54 M+ LL PL + + + + + S L +V Sbjct: 1 MYLTLLALPLSCFICLALFGRLLGTRGSALLSVFSSVCCTVISCFIFYEVALCACPCHIV 60 Query: 55 QTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCD 114 E+F A D L + ++ ++ L I+S YM + Sbjct: 61 LAPFFHSELFDANWGFLFDTLSAVMCVVVTLVSCLVVIFSCSYMIEDPH--------FIR 112 Query: 115 YYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICT 173 + + LF ML++VT++N I ++ E L+S L+ + R S +AA + +++ Sbjct: 113 FISYLKLFTVAMLILVTADNYIQLFVGWEMVGLASFLLISFWFTRLQSSKAAIQAMLLNR 172 Query: 174 VGVAFGLFGTVLVYANAASVMPQAEMAIFW-SEVLKQSSLLDPTLMLLAFVFLLIGFGTK 232 VG G + ++ + Q A + L L+ +A + L IG K Sbjct: 173 VGDMGLALGVICLFYMFKTTNYQVIFASAMNTSELLVLGPFTFNLLDVACILLFIGAMGK 232 Query: 233 TGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLI 291 +G F +H WLP+A + AP+PVSALL A ++ + +L R + + + I Sbjct: 233 SGQFGLHVWLPEAMA-APTPVSALLHAATMVTAGVFLLARSSPLFEY---TPTAAAFVTI 288 Query: 292 FGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAK 351 G ++ A LVQ D+KR++AYS+ +G + G + H+ NH+ K Sbjct: 289 VGAITCIFAGTIGLVQNDLKRIIAYSTCSQLGYMVTTCGASN---YAVGIFHLFNHAFFK 345 Query: 352 TLLFCGSGNVLLK-YGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 LLF +G ++ +D+ G+ +++ F+ L G+LAL G P F S+ + + Sbjct: 346 ALLFLSAGAIIHALANEQDIRKYGGLAQVLVFSYTLVLIGSLALIGTPFLTGFYSKDVIL 405 Query: 411 TAGLARNHL---LIIVLLLLLLTLVLAGLVRMAARVL----------------------- 444 AR L +L + R+ Sbjct: 406 ELASARYALSVHFSYLLATFSVLTTSYYSFRLIFFCFSSCFSDPRTTGTKSHLATFEKDQ 465 Query: 445 --MAKPPQAVN-----RGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRI 486 + K P D W+ + P++IL + + G + I + Sbjct: 466 VSLGKLPNLHRQNIKGAHDPDWVMSLPLIILALGSIYAGFLFKEMFIGL 514 >UniRef50_B0R3U9 NADH dehydrogenase-like complex subunit L n=9 Tax=Halobacteriaceae RepID=B0R3U9_HALS3 Length = 692 Score = 325 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 130/524 (24%), Positives = 215/524 (41%), Gaps = 58/524 (11%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWV-----------VQ 55 LL L +LL + L + + + +L++ + +V + Sbjct: 11 IPLLPFASFLVALLAGYFAPKLLPKGGAIPGIVATAGSLVVSVWAFVTVSQGEYIAESIY 70 Query: 56 TAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 T A F+ + +D L + L I+ ++ FL ++S+GYM E G L Y Sbjct: 71 TWVAAPNAFSLHFGVLVDPLAAMMLVIVSLVAFLVHVFSLGYMNDEGEGG------LHRY 124 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSL-EAAWKYIIICTV 174 Y LF F+ML V ++NL++ + E L S L+G + ++ AA K ++ Sbjct: 125 YAGLGLFTFSMLAFVVADNLLMAFMFFELVGLCSYLLIGFHFRQQGPPSAAKKAFLVTRF 184 Query: 175 GVAFGLFGTVLVYANAASVMPQAE------MAIFWSEVLKQSSLLDPTLMLLAFVFLLIG 228 G F L G V V+A + A + L +A ++G Sbjct: 185 GDYFFLIGVVAVFATFGTARFVATGEGAHAFPHMAEQALAAVGGEGTMPAHVAHFLDVVG 244 Query: 229 F-----------------GTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLI 270 K+ FP+H WLPDA E P+PVSAL+ A ++ + ++ Sbjct: 245 MSAQQWFSVVGLLVLGGVIGKSAQFPLHTWLPDAM-EGPTPVSALIHAATMVAAGVYLVA 303 Query: 271 RYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELG 330 R Y ++ + G + AA +V+ ++K++LAYS++ G + + LG Sbjct: 304 RMYGFY---ALLPTVLAIIALVGGFTALFAATMGVVKDELKQVLAYSTISQYGYMMLGLG 360 Query: 331 IGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTR-DLNVVCGMLKIMPFTAVLFGG 389 G G AA H+L H+ K LLF G+G+V++ ++ + G+ K MP T F Sbjct: 361 TG---GYIAASFHLLTHAFFKALLFLGAGSVIIAMHHNENMWDMGGLRKKMPVTYYTFLS 417 Query: 390 GALALAGMPPFNIFLSEFMTITAGLARNH------LLIIVLLLLLLTLVLAGLVRMAARV 443 G+LALAG+ PF F S+ + L L + LL + RM Sbjct: 418 GSLALAGIVPFAGFWSKDEILYEALIYGAGDSPILLAAYAMGLLAVFFTGFYTFRMVVLT 477 Query: 444 LMAKPP--QAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIR 485 +P A + + W P+V+L V+ +G PV Sbjct: 478 FHGEPRSDTAEDPHGVRWNVKFPLVVLGVLAATVGLVNMTPVAE 521 >UniRef50_A4X1Y8 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Micromonosporaceae RepID=A4X1Y8_SALTO Length = 649 Score = 325 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 108/431 (25%), Positives = 177/431 (41%), Gaps = 31/431 (7%) Query: 93 YSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFL 152 YS+GY+R Y LF MLLVV + +LI++ E L S L Sbjct: 110 YSVGYLRSGPHDEVDVDHRYPPYAAQISLFTAAMLLVVVAGDLILLLVGWEVMGLCSYLL 169 Query: 153 VGIYGQ-RSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSS 211 + + ++ AA K ++ VG L G L+ +A S + + L ++ Sbjct: 170 IAHERRLPAAPAAAMKAFLVTRVGDVGFLLGIALLGVSAGSFRIADVLGHDHATGLLTAA 229 Query: 212 LLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSA-VLLNCALLVLI 270 L G K+ FP+H WLPDA + P+P+SAL+ A ++ + V+ Sbjct: 230 CLLLLA----------GVAGKSAQFPLHTWLPDAMA-GPTPISALIHAATMVAAGVYVVA 278 Query: 271 RYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELG 330 R + + Q +L + +++ + AF + Q D+KR+LA+S+V +G + L Sbjct: 279 RLFPLFVQV---PVALAVLGVLASITLLLGAFAAIAQDDLKRVLAWSTVSQLGYLTGALA 335 Query: 331 IGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGG 390 +G P AAL H+L H+ K LLF +G V+ GT ++ + G+ + MP T G Sbjct: 336 VGAP---TAALFHLLTHAAFKALLFLAAGAVIHAAGTALMSQLGGLRRTMPVTFWSMLIG 392 Query: 391 ALALAGMPPFNIFLSEFMTITAGLARN----------HLLIIVLLLLLLTLVLAGLVRMA 440 ALAG+PP + F S+ + A + + L +TL R+ Sbjct: 393 LGALAGLPPLSGFFSKDAVLYAAEEAALHGGPAPTWVGWSVWLAGLAGVTLTAGYATRLL 452 Query: 441 ARVLMAKPPQAVN-RGDLGWLTTSPMVILLVMMLAMGTH-IPQPVIRILAGASTIVLSGT 498 R P + D + P+++L V +G L + + Sbjct: 453 LRTFFGAPRSPLRQPHDPPAVMRWPVLLLTVPAALLGLAGFSGAFAGWLEPSWSATRERP 512 Query: 499 HDLPAQRSTWH 509 DL H Sbjct: 513 ADLLPVDPLVH 523 >UniRef50_C6BS86 Proton-translocating NADH-quinone oxidoreductase, chain M n=8 Tax=Bacteria RepID=C6BS86_DESAD Length = 511 Score = 325 bits (834), Expect = 3e-87, Method: Composition-based stats. Identities = 101/480 (21%), Positives = 191/480 (39%), Gaps = 29/480 (6%) Query: 7 FALLLLTPLLFSLLCFACRKRRLSATRTVTV-----LHSLGITLLLILALWVVQTAADAG 61 +L+ PLL ++ F + T+ V S + L Q Sbjct: 9 LTVLVFFPLLAAVGLFFLKGDNTIRMYTLGVSIIELALSFPLFAGFKLESAAFQFVERMD 68 Query: 62 EIFAAGLWLHI--DGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 + G+ ++ DG+ L + + + L + S Y+ + +++ Sbjct: 69 WVKQWGVEYYLGTDGISFLMVVLTIAVLPLCVLCSWTYI----------QTRVKEFHFCL 118 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFG 179 + V T+ +L++ + EA + L+ ++G A+ K+ + G A Sbjct: 119 LFMTAACVGVFTALDLVLFYVFWEAMLIPMYLLIAVWGGPEKRYASLKFFLYTLAGSALL 178 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L V + M ++ + + L L K +FP H Sbjct: 179 LVAIVAFRIAGGTFAIPELMEQNFAFNFQFWAFLALALAFAI----------KVPMFPFH 228 Query: 240 AWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLP AH +AP+ S +L++VLL +R+ + + A S++ ++ + + Sbjct: 229 TWLPAAHVQAPTAGSVILASVLLKMGTYGFLRFNLPLTPA-ASEYFAPFMIAISIAGILY 287 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 L Q DIK+++AYSSV +MG V + + + G+ AL +LNH + LF G Sbjct: 288 GGIVALGQNDIKKVIAYSSVGHMGFVTLGIFLFNQRGLEGALFQMLNHGITTGGLFMMIG 347 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 V + +R+L+ G+ K MP +G AL+ G P N F+ E + +N Sbjct: 348 AVYERSHSRELDDNLGLGKYMPAYMFFWGLFALSSFGFPGTNSFVGEILVFVGAFEQNPW 407 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHI 479 + L++ + A ++R++ ++ +P DL + +VI V +L +G Sbjct: 408 I-GALMVPGAMVAAAYMLRVSLKLAWGRPTSWKEWPDLNLREWTYLVIPAVFVLYIGLAP 466 >UniRef50_Q2GF39 NADH dehydrogenase I, L subunit n=2 Tax=Neorickettsia RepID=Q2GF39_NEOSM Length = 655 Score = 324 bits (832), Expect = 5e-87, Method: Composition-based stats. Identities = 94/438 (21%), Positives = 186/438 (42%), Gaps = 24/438 (5%) Query: 28 RLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHI--DGLGGLFLAILGV 85 S + + S + L + + + + + D L L ++ Sbjct: 38 LSSFLIGLAAISSWSLFFTLEDGEAFLLPLFEWISVGSLQALFRVNIDKLTVLMFVVVNT 97 Query: 86 IGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEAT 145 + F+ YSI YM+++ ++ + LF F ML++V++ +L+ ++ E Sbjct: 98 VSFVVHCYSIAYMKNDPCK--------SRFFAYLSLFTFAMLVLVSAGDLLQLFLGWEGV 149 Query: 146 TLSSAFLVGIYGQRSSLE-AAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWS 204 + S L+G + ++ S A+ K ++ VG L G VY ++ + ++ Sbjct: 150 GVCSYLLIGFWFRKESANVASMKAFLVNRVGDFCFLIGIFSVYKIFGTLELKGIISDVGF 209 Query: 205 EVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLN 263 + D + + L IG +K+ +H WLPDA E P+PVSAL+ A ++ Sbjct: 210 HSGETILGFDS--LTFICLMLFIGCMSKSAQLGLHTWLPDAM-EGPTPVSALIHAATMVT 266 Query: 264 CALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMG 323 + +L R + ++ +++ G+ + A + L Q DIKR++AYS+ +G Sbjct: 267 AGVFLLARLSPLFE---CTELVRHIIMWVGVSTAAFGSVVALCQDDIKRIIAYSTCSQLG 323 Query: 324 LVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKY-GTRDLNVVCGMLKIMPF 382 + G A+ H+ H+ K LLF +GNV+ G +D++ + + + Sbjct: 324 YMFAACGAS---AYGLAIFHLSTHAFFKALLFLCAGNVIHSVGGEQDVHKMGALRNKIFS 380 Query: 383 TAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAAR 442 T + G+LAL G+ PF F S+ + I++ + +LL+L R+ Sbjct: 381 TYCMMIIGSLALCGIFPFAGFYSKDLIISSLSHAE--IPFILLILTAFCTSVYSCRLLML 438 Query: 443 VLMAKPPQAVNRGDLGWL 460 V + ++ + + Sbjct: 439 VFFGEQNFSLKKFHSPPV 456 >UniRef50_B1ZSD9 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria RepID=B1ZSD9_OPITP Length = 662 Score = 324 bits (831), Expect = 5e-87, Method: Composition-based stats. Identities = 138/511 (27%), Positives = 211/511 (41%), Gaps = 45/511 (8%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 S+ LL + A R R T+ + + +L Sbjct: 1 MSIGILLLFAAIAFAGAIAVAWRAPRAWLGFTLLGAAAAFVAGARVLVSGAAWDWRSTWV 60 Query: 63 IFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLF 122 + L + +D + FL +L V+G +YS Y ++ L Sbjct: 61 LGGENLHVRLDAVSAFFLVLLAVVGGAASVYSREYWSDRAHPRSARSGR-----AWWTLL 115 Query: 123 LFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAA-WKYIIICTVGVAFGLF 181 L TM V+ + N + A E +S FL+ QR + AA W Y G Sbjct: 116 LATMGAVLVAANGLHFLIAWELFAVSGYFLITRERQRREVRAAGWLYFAASHAGTLCLFG 175 Query: 182 GTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAW 241 L+ A S ++ D + F L+GFG K GLFP+H W Sbjct: 176 FFTLLAARTGSWDL--------------GAMQDRRELAPLFWLALVGFGVKAGLFPLHIW 221 Query: 242 LPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAA 301 LP AH+ APS VSA+LS V L + L+R+ + ++ + G+ S + Sbjct: 222 LPSAHANAPSHVSAILSGVALKMGIYGLVRFSGWL---PVPVAAGWVIALLGVASAVLGV 278 Query: 302 FFILVQRDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLA 350 F L Q D+KRLLAY SVEN+G++ + LG G L + LLHI NH L Sbjct: 279 AFALGQHDLKRLLAYHSVENIGIILIGLGFALVATANGEPAWGRLALAGGLLHIWNHGLF 338 Query: 351 KTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTI 410 K LLF G+G+VL GTR+++ + G+ + MP+TA F GA+A++G+PP N F+SE++ Sbjct: 339 KALLFLGAGSVLHATGTREMSRLGGLWRTMPWTAGCFTLGAVAISGLPPLNGFVSEWLVF 398 Query: 411 TAGLARNH---------LLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ--AVNRGDLGW 459 + +LL + L LA ++ V + P A + + G Sbjct: 399 LGLFDAAGAGGLPAWAAVPAAILLGMTGALALACFAKVCGVVFLGLPRSAVAEHAHESGP 458 Query: 460 LTTSPMVILLVMMLAMGTHIPQPVIRILAGA 490 L PM++L +A+G + Sbjct: 459 LMRGPMLLLAACCVAIGLAPVFFWPALAHAI 489 >UniRef50_A7ZBL2 Hydrogenase-4 component F n=6 Tax=Epsilonproteobacteria RepID=A7ZBL2_CAMC1 Length = 493 Score = 324 bits (831), Expect = 6e-87, Method: Composition-based stats. Identities = 171/470 (36%), Positives = 265/470 (56%), Gaps = 1/470 (0%) Query: 28 RLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIG 87 ++ LH L + L V G ++ +L +D LG +FL ++ V G Sbjct: 21 SPKNYAVLSGLHVLFSAATSVALLNNVLKVLSGGTFYSFDKFLFLDSLGCVFLVLIAVTG 80 Query: 88 FLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTL 147 F+ YSI YMR E+ G + L YY H+F+FTM L V NN+ MWAAIEATTL Sbjct: 81 FIVNFYSIHYMRWELEDGHIHLSDLKKYYALSHVFIFTMTLSVICNNVAFMWAAIEATTL 140 Query: 148 SSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVL 207 +S FLV I+ + S E+ +KYI++C++G+AF L+ TVL+Y+ S + E ++ +S ++ Sbjct: 141 ASVFLVAIHKDQKSTESGYKYIVLCSIGLAFALYATVLLYSATYSTLGDGEASMQFSSIM 200 Query: 208 KQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALL 267 + L+P L FVF LIGFGTK GL P H WLPD H+E P+P+SALLS VLL CA+L Sbjct: 201 ANAKNLNPDAAKLIFVFALIGFGTKAGLAPTHTWLPDVHAEGPAPISALLSGVLLKCAML 260 Query: 268 VLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAV 327 L+RYY I QA+G F ++++ G +++ VA FF++ Q ++KR+ AY S+ +MG++A Sbjct: 261 ALLRYYAITAQAVGFSFVEGVMIVSGTITLFVAGFFLIRQHNVKRMFAYHSIVHMGVIAF 320 Query: 328 ELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLF 387 LG+GG G+FAA+ H L HS K L FC +GN+ YG +D++ + GM+KI P T ++F Sbjct: 321 ALGVGGKFGLFAAIFHCLAHSFTKALAFCSTGNIARIYGHKDMSKMGGMVKIAPITTIMF 380 Query: 388 GGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAK 447 G +L G+P F IF+SE+ + + + L + L ++ + Sbjct: 381 GAAVCSLVGVPAFAIFVSEYNVFVGAITSGQYIAVALFAIALAVIFIADFAHFNMASFGE 440 Query: 448 PPQ-AVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLS 496 P V+ ++ P++ L +++ G ++ I++ Sbjct: 441 PKGVVVHNKEMSLFENLPLIALCALIIIFGVWHVDSFYTLVNNGVNIMMG 490 >UniRef50_C9N684 Proton-translocating NADH-quinone oxidoreductase, chain L n=17 Tax=Streptomyces RepID=C9N684_9ACTO Length = 666 Score = 324 bits (831), Expect = 6e-87, Method: Composition-based stats. Identities = 129/550 (23%), Positives = 216/550 (39%), Gaps = 48/550 (8%) Query: 1 MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADA 60 M+ + + L+ L P L + + R + VL +L +L +L Sbjct: 1 MTTTTLAVLVPLLPFLGAAAGLLLGRTAPGFVRPLAVLPTLAAAVLAVLVASRQGGGRPI 60 Query: 61 GEI--------FAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTL 112 L LH+DG L ++G++ +YS Y++ + Sbjct: 61 DAATQLTPTGSVPIDLALHLDGFAVLVAVLVGLVATCVQVYSTAYLKDD--------ARY 112 Query: 113 CDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIII 171 Y LF MLLVV S +L+V+ E + S FLVG + + A+ K ++ Sbjct: 113 PSYAALVSLFTSAMLLVVYSGDLMVLLVGWEIMGICSYFLVGHYWETPEARAASLKAFLV 172 Query: 172 CTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGT 231 +G L G + A+ + +A + L L + LL G Sbjct: 173 TKLGDVPFLIGLFALAADTGTFRITGILAAVNNGGLDHP--------TLIALLLLAGVAG 224 Query: 232 KTGLFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLL 290 K+ FP+H WLPDA + P+PVSAL+ A ++ + + R + + + ++ Sbjct: 225 KSAQFPLHTWLPDAMA-GPTPVSALIHAATMVAAGIYFVARLLPVFAASAAALVVLAVMA 283 Query: 291 IFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLA 350 +++ + L Q DIKR+LAYS++ +G ++ L +G AA+ H+L+H Sbjct: 284 ---AVTMIGSGLAALAQDDIKRVLAYSTIGQLGYMSGALAVGDR---GAAVFHLLSHGAF 337 Query: 351 KTLLFCGSGNVLLKYGTRD---LNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 K +LF +G V+ GT ++ + G+ K +P LALA +PPF F S+ Sbjct: 338 KAVLFLSAGVVIHAAGTNSLAAMSRMSGLTKRIPDAFWTMTVALLALAAIPPFAGFFSKE 397 Query: 408 MTITAGLA-----------RNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGD 456 + A L++V L L A R+ + P+A + G Sbjct: 398 AVLVAAEHTAFGDRDVAPAAAGWLVLVAGLTAAVLTAAYATRLWLLAFRGRGPEAADHGR 457 Query: 457 LGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGT 516 TS + +L V +A G V + T L T L + G Sbjct: 458 QPAAMTSVLWVLAVPTIAFGLLTGVLVDWFDGHSLTPSL-TTAVLSTGVGLVGGLVTYGA 516 Query: 517 ASVSEKHSER 526 + H+ER Sbjct: 517 WRHTTAHAER 526 >UniRef50_B6AS28 NADH dehydrogenase (Quinone) n=3 Tax=Leptospirillum RepID=B6AS28_9BACT Length = 686 Score = 323 bits (830), Expect = 7e-87, Method: Composition-based stats. Identities = 145/538 (26%), Positives = 235/538 (43%), Gaps = 37/538 (6%) Query: 11 LLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE-IFAAGLW 69 +L L ++L +K + ++ + L + + + V D Sbjct: 23 ILLGALGAVLAGHGKKASALSFGSLLLPALLASIAGVDILIHPVPQTRDLPFGWPGIPFR 82 Query: 70 LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129 L +D L G FLA+LG + +++IG+ R + + + LFL TM V Sbjct: 83 LALDPLSGFFLAVLGFVSIPVLLFAIGFFRDDSVRKTRWVL------FWLPLFLGTMSGV 136 Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLE-AAWKYIIICTVGVAFGLFGTVLVYA 188 + +++++ E LSS FLV + A + Y+++ +G L L+ Sbjct: 137 LLADDVLTFLVFWEGMALSSFFLVVTDISEEGVRKAGFLYLLMAQIGTGLILLSFFLL-- 194 Query: 189 NAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSE 248 S ++ ++++ + + P + F GFG K G+ P+H WLP+AH Sbjct: 195 ADGSSPDGGLSSLAFADLSRLP--VSPGIAGWVFFLSFAGFGAKAGIVPLHVWLPEAHPV 252 Query: 249 APSPVSALLSAVLLNCALLVLIRYYIIICQAI-GSDFPNRLLLIFGMLSVAVAAFFILVQ 307 APSPVSAL+S ++L AL +IR + + F +L G LS LVQ Sbjct: 253 APSPVSALMSGLMLKIALYGMIRVDLGLLGVSHLQPFMGVAVLAIGSLSALFGVLHALVQ 312 Query: 308 RDIKRLLAYSSVENMGLVAVELGIG-----------GPLGIFAALLHILNHSLAKTLLFC 356 D KRLLAY S+EN+G++ + G+ + A+L H+LNH+L K+LLF Sbjct: 313 HDPKRLLAYHSIENIGIILIGFGLFLIFRTTGHPVPAAVAFSASLFHVLNHALFKSLLFL 372 Query: 357 GSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLAR 416 G+G +L K GT DLN + G+ + MP T+ LF GALA++G+PP N FLSE++T A L Sbjct: 373 GAGTILKKTGTHDLNDLGGLFRTMPATSFLFLVGALAISGLPPLNGFLSEWLTFQAALFA 432 Query: 417 NHLLIIVL----------LLLLLTLVLAGLVRMAARVLMAKPPQAVN--RGDLGWLTTSP 464 L + L L L V++ + + S Sbjct: 433 PSLSTFLFQSAVVLSAALLALSSALTAMCFVKVTGVSFFGQARSVRASLVREDRGFELSA 492 Query: 465 MVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEK 522 M IL + L + P PV+ L+ S + A++ W +P ++ Sbjct: 493 MAILALGCLGL-GLFPSPVLSGLSSVSLSLTGQPLPFDAEKDPWLWLVPVSSSRAQYS 549 >UniRef50_Q11RU6 NADH dehydrogenase I chain L n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11RU6_CYTH3 Length = 685 Score = 323 bits (830), Expect = 7e-87, Method: Composition-based stats. Identities = 108/560 (19%), Positives = 210/560 (37%), Gaps = 63/560 (11%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 S + + P++ ++ F K ++ R+ +G+ +L L L Sbjct: 18 ISQLALTIFFLPVITFVVLFFAGKHIPASIRSWLATTVMGVMFVLSLYLHTQIEGEHLSR 77 Query: 63 IFAAGLW-------LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDY 115 + L + + I + F+ +YS+ YM+ H + Y Sbjct: 78 WIWFEIGSIQFTTSLLLTNYSSTMMLIATFVSFMVHLYSVQYMKERRNHSK--------Y 129 Query: 116 YGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS-SLEAAWKYIIICTV 174 + + LF+ +ML ++ S+NL++ + E L+S L+G + ++ S AA K + Sbjct: 130 FPYLALFVSSMLGIILSDNLLITFIFWELVGLASFLLIGFWYEKDSSAAAAKKAFLYNKF 189 Query: 175 GVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTG 234 + +++ A + Q+SL+ + LA + + K+ Sbjct: 190 ADLAFVIAIMILSAVYGTTEISVIKEHVHISAALQTSLVGLPV--LAGLAIWFATVGKSA 247 Query: 235 LFPMHAWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFG 293 FP++ WLPDA + P+PVSALL A ++ + +L++ ++ + ++I G Sbjct: 248 QFPLYVWLPDAMA-GPTPVSALLHAATMVAAGVFLLLKTSFLLGG-----WVAHFIVIIG 301 Query: 294 MLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTL 353 ++ +AA + D K++LAYS+V +G + + +G G AA H+ H+ K Sbjct: 302 CITALLAALQAIRTFDAKKVLAYSTVSQLGYMMMAVGAG---ATDAAFFHLATHAFFKAC 358 Query: 354 LFCGSGNVLLKYG----------------TRDLNVVCGMLKIMPFTAVLFGGGALALAGM 397 LF G V+ T D+ ++ K MP T V + AL G+ Sbjct: 359 LFLSVGAVIHAMHHMQSHQFDHGQYKELDTLDMRLMGSFRKKMPITFVSYTVAYAALIGL 418 Query: 398 PPFNIFLSEFMTITAGLARNH------LLIIVLLLLLLTLVLAGLVRMAARVLMAK---- 447 P F+ FLS+ + H LI+ + L + R + Sbjct: 419 PFFSGFLSKDAILGGLYDWAHATGGWSWLIVAAAFATVGLTAFYMTRQFILIFFGDFRLI 478 Query: 448 ------PPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDL 501 + + WL PM+IL + + + + ++G Sbjct: 479 KIDDSYKKFFEHIKESEWLINIPMMILAALSMWFFFSLNPLHAQTGWWMKESFVTGHAHD 538 Query: 502 PAQRSTWHDFLPSGTASVSE 521 + + +V+ Sbjct: 539 ---FHLFIPVVAIAITTVAL 555 >UniRef50_C4ZJD8 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Proteobacteria RepID=C4ZJD8_THASP Length = 911 Score = 323 bits (830), Expect = 8e-87, Method: Composition-based stats. Identities = 112/524 (21%), Positives = 205/524 (39%), Gaps = 30/524 (5%) Query: 3 YSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGE 62 L+ L L +R + + + + + Sbjct: 1 MLASIGLIAFAMLAAVPLVGRLGERAGWVLALAPLAAFVHFLVHMPTVAGGGVVTSSLAW 60 Query: 63 IFAAG--LWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFH 120 + A G L +DGL LF ++ IG L +Y+ Y+ L ++ Sbjct: 61 VPALGVELAFRLDGLSLLFALLITGIGTLIVLYAGAYLSDHHH--------LGRFHACLL 112 Query: 121 LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQR-SSLEAAWKYIIICTVGVAFG 179 F+ ML +V +++LI M+ E T++ S L+ + S AA + ++I G Sbjct: 113 GFMAAMLGLVLADDLIAMFVFWELTSVCSFLLIAFQHDKAESRRAALQALLITGGGGLAL 172 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L G +L+ + S +E L +LIG TK+ P H Sbjct: 173 LAGLILLGSVGGSWQFSGLSGEAIAE---------HALYPAILALVLIGAFTKSAQLPFH 223 Query: 240 AWLPDAHSEAPSPVSALLS-AVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVA 298 WLP+A + AP+PVSA L A ++ + +L R + GS +L+ G + Sbjct: 224 LWLPNAMA-APTPVSAYLHSATMVKAGVYLLARLNPALG---GSTSWGTILITVGAATAL 279 Query: 299 VAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGS 358 V A + Q D+KR+LAY++V +G + + LG G+ A ++++ H+ K LF Sbjct: 280 VGAVLAIRQTDLKRVLAYTTVTVLGQLVMLLGTNTHYGLQAFAIYLVAHAFYKAALFMAV 339 Query: 359 GNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN- 417 G + GTR + ++ G+++ MP T A + AG+PPF F+++ + Sbjct: 340 GAIDHATGTRQIALLGGLIRHMPLTGFAVALAAFSNAGLPPFFGFIAKEFKYAGLIELGV 399 Query: 418 -HLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAV-NRGDLGWLTTSPMVILLVMMLAM 475 + +++L L+L + R + + + ++ ++L + Sbjct: 400 AGWVTTAVMILTNALLLTAAGLVFVRAFLGREGRYPQPPHEVSLPMWLGPMLLAIGGFVF 459 Query: 476 GTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASV 519 G + ++ A V +P W P+ AS+ Sbjct: 460 GAFNNLAEVWLIDAAVQAV--SRATVPVNLYLWGGVTPALLASL 501 >UniRef50_C3PH86 pH adaptation potassium efflux system transmembrane protein n=7 Tax=Corynebacterium RepID=C3PH86_CORA7 Length = 993 Score = 323 bits (830), Expect = 8e-87, Method: Composition-based stats. Identities = 108/477 (22%), Positives = 199/477 (41%), Gaps = 30/477 (6%) Query: 49 LALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELS 108 L+ V L D LG F + VIG + YS Y+ + Sbjct: 56 LSYSVTWVRDVIAPGVDVNLAFRGDALGIFFAMLALVIGAVVFTYSAAYLPKGKGN---- 111 Query: 109 PVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKY 168 +Y F ++LL+V +N+++V++ A E +L+S L+ G +S + + Sbjct: 112 ----VSFYVLMTAFTLSILLLVLANDVVVLFLAWELVSLASFMLIARSG-KSGEAGSQRT 166 Query: 169 IIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIG 228 +I+ +G L G + A + + +A L + + + Sbjct: 167 LILTFIGGLTLLSGVAIAATAAGTTSLEGILASDVWAERT-------GLTAGVAILIAVS 219 Query: 229 FGTKTGLFPMHAWLPDAHSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDFPNR 287 TK+ FP H WLP+A + A +PVSA L A ++ + +LIR+ I N Sbjct: 220 AFTKSAQFPFHFWLPEAMAAA-TPVSAFLHAAAVVKAGVYLLIRFSTIFHDVAA---WNW 275 Query: 288 LLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNH 347 LL++ GM + ++A F + + D+K+L AYS+V ++G + +G+G P I AAL+H L H Sbjct: 276 LLIVAGMGTAVMSAVFAVQKTDLKKLTAYSTVSHLGWIVATIGVGTPFAIAAALVHTLAH 335 Query: 348 SLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEF 407 +L K+ +F G + + G+RD+ + + MP+T GA ++A +PP F+S+ Sbjct: 336 ALFKSSIFMLIGVIDHEAGSRDIRRLGVLWNKMPWTFGSMLIGAASMAAVPPLFGFVSKE 395 Query: 408 MTITAGLAR-----NHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTT 462 +TA L++++ + ++ P + + Sbjct: 396 GMLTAFEEAPIGSTGQALLLIVAGVGAFFTFTYSAKIIFGAFFDGPRNMSHVHEAPVRLW 455 Query: 463 SPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASV 519 P + VM + + + + + L + + + + WH SV Sbjct: 456 LPAALPGVMSVPI-IFVMGALDKPLDNIVAAI---GMEGHSHLALWHGLNVPLLISV 508 >UniRef50_C9N9J1 NADH dehydrogenase (Quinone) n=12 Tax=Streptomyces RepID=C9N9J1_9ACTO Length = 967 Score = 323 bits (830), Expect = 9e-87, Method: Composition-based stats. Identities = 114/523 (21%), Positives = 206/523 (39%), Gaps = 34/523 (6%) Query: 8 ALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTA------ADAG 61 +L+L + + +R V L T+ D Sbjct: 2 TVLVLCHFVLAACAVPLVRRLGRRAFVVLALPPAATTVWAFTQWGTTADGGTVTSSWDWI 61 Query: 62 EIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHL 121 + + L +D L L + + +G L +Y Y L + G Sbjct: 62 ATYDVTVALRLDALAELMVLLAAGVGMLVLLYCASYFTD-------GSPQLAPFAGNLLA 114 Query: 122 FLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTVGVAFGL 180 F ML +V +++LI ++ E TT+ S L+G ++ + +A + + + T+G L Sbjct: 115 FAGAMLALVLADDLITLYVFWELTTVFSYLLIGHTSERKKNRRSALQALTVTTLGGLAML 174 Query: 181 FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHA 240 G +++ A + A +A L S + L G +K+ ++P Sbjct: 175 VGFLILGEAAGTYRISAIVADPPEATLAVSVAVVLVL---------CGALSKSAIWPFSL 225 Query: 241 WLPDAHSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 WLP+A + AP+PVSA L A ++ + ++ R ++L+ G ++ + Sbjct: 226 WLPNAMA-APTPVSAYLHAAAMVKAGVYLVARLAPAFADV---PVWRPVVLVLGGATMLL 281 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 + L D+K +LAY +V +G + V G G AA+ IL H+L K LF +G Sbjct: 282 GGWRALRLHDLKLVLAYGTVSQLGFLTVLAGAGNRNAALAAVAMILAHALFKAALFLVTG 341 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 V GTRDL + G+ + MP+ + A ++A +PP F ++ + A L + Sbjct: 342 IVDHATGTRDLRALSGLGRTMPYLCAVGVLAAASMAAVPPLLGFAAKEAALEALLHGDTA 401 Query: 420 --LIIVLLLLLLTLVLAGLVRMAARVLMAKPP-QAVNRGDLGWLTTSPMVILLVMMLAMG 476 + +++L L +A +R K +G +P +L V L +G Sbjct: 402 DRWELAVVVLGSVLTVAYTLRFVWGAFARKRGVADTPAHRVGAALLAPPAVLAVAGLVLG 461 Query: 477 THIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASV 519 + R+ A + + + H P + WH F + S Sbjct: 462 PGV-GWTDRLFAAYADVFPAPAH--PYHLALWHGFGTALLLSA 501 >UniRef50_A7JYE5 Na(+) H(+) antiporter subunit D n=3 Tax=Vibrio RepID=A7JYE5_VIBSE Length = 498 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 108/510 (21%), Positives = 213/510 (41%), Gaps = 26/510 (5%) Query: 4 SVMFALLLLTPLLFSLLCFACRK--RRLSATRTVTVLHSLGITLLLI--LALWVVQTAAD 59 S++ L ++ L +L F R+ + + + + +L + LL + +Q A Sbjct: 3 SILLTLPVVLSLSTALTIFFVRRSTKSVEWLSGASAILNLVVAGLLTENIISNGIQAVAF 62 Query: 60 AGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 G+ D + I VIG + Y++ + + ++ Y+ Sbjct: 63 GQWQAPFGIVFVADYFSVAMVMITAVIGAICVFYAMADLHRKPSYSN--------YHALT 114 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFG 179 H+ L + + ++ ++ E ++S L+ + ++ ++ A KY+++ + Sbjct: 115 HVLLAGVYGAFLTGDIFNLYVWFEVMLIASFGLMVLDATKTQIDGAVKYVMLNLISTLVF 174 Query: 180 LFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMH 239 L L+Y ++ L + +L L F K LFP+ Sbjct: 175 LLAIGLLYGATGTLNLADLYTKAGESELSINMMLS--------ALFLFAFSIKAALFPLF 226 Query: 240 AWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAV 299 AWLP ++ PS V AL +A+L + LIR + ++ S L+ L++ Sbjct: 227 AWLPASYHTLPSGVVALFAALLTKVGVYALIRVFTLVFPLAESG-WQPTLIWIAGLTMLT 285 Query: 300 AAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSG 359 Q DIK++L++ + +G + + L I PL + A+ +I++H + K LF G Sbjct: 286 GVLGAASQFDIKKILSFHIISQIGYMIMGLAIYTPLALAGAIFYIVHHIIVKANLFLIGG 345 Query: 360 NVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHL 419 + KYG+ L + G+ K MP+ A LF A +LAG PP + F +F+ I + L + Sbjct: 346 FIERKYGSSQLEHLGGVYKAMPWLAFLFLVPAFSLAGFPPLSGFWGKFLVIKSSLQAEYY 405 Query: 420 LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRG----DLGWLTTSPMVILLVMMLAM 475 + LL+ L + + ++ + KP + + WL P+ +L + L + Sbjct: 406 WLAGTALLVGLLTVYSMTKIWSEAFWKKPVREKTEQTLQVKVHWLYCVPIAVLTMFTLII 465 Query: 476 GTHIPQPVIRILAGASTIVLSGTHDLPAQR 505 G + +P + A+ +L+ + A Sbjct: 466 GL-VAEPFYQFSVQAAEQLLNPNEYIRAVL 494 >UniRef50_C7MG69 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MG69_BRAFD Length = 981 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 123/527 (23%), Positives = 213/527 (40%), Gaps = 27/527 (5%) Query: 2 SYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAG 61 S M L+ L+ L + V +L + L AL Sbjct: 4 SVFTMLLAHLVAALVGPFLVRRIGRNAFYPLAVVPGASALWLLTLDPRALADAPRVESVP 63 Query: 62 EIFAAGL--WLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF 119 I A G+ +D L + I IG + +Y Y + + L + G Sbjct: 64 WIPAFGIDLAFRLDTLSWVLTLIATAIGAVVLVYCARYFKD-------TEPGLGRFAGVL 116 Query: 120 HLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS-LEAAWKYIIICTVGVAF 178 F M+ +V ++++++++ E TT+ S LVG Y R + AA +I T G Sbjct: 117 TAFAGAMVGLVLADDVMMIYTFWELTTVFSYLLVGHYQDRQASRRAALNALISTTAGGLA 176 Query: 179 GLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPM 238 L G ++V A+A S V+ +L A +L+G +K+ L P Sbjct: 177 MLVGLLMVAASAGSFRLSEI-------VIDPMWQSAGPYLLTAMALILVGATSKSALVPT 229 Query: 239 HAWLPDAHSEAPSPVSALLSAV-LLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSV 297 H WLP A + AP+PVSA L A ++ + +++R + + +L G ++ Sbjct: 230 HFWLPGAMA-APTPVSAYLHAAAMVKAGVYLILRMAPALTHL---EIVTMILAGLGAATM 285 Query: 298 AVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCG 357 V + L Q DIK LLAY +V +G +A G+ +FA L ++ H++ K LF Sbjct: 286 LVGGWRALRQTDIKLLLAYGTVSQLGFLAAVAGLATHDAVFAGLAMLIAHAVFKAPLFMV 345 Query: 358 SGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARN 417 G + K+GTRDL V+ G+ + P AV+ A ++A +P F+++ TA Sbjct: 346 VGIIDKKFGTRDLRVLSGVGRAAPVVAVIGTLSAASMAAVPSLYGFVAKESIYTALWVAG 405 Query: 418 HL--LIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA-VNRGDLGWLTTSPMVILLVMMLA 474 L+++ L+ L +A R P V + L P ++ V + Sbjct: 406 GWQRLLLLSLVAGSVLTVAYSWRFVHGAFGIAPGAPRVETPRIAVLYWLPPALVAVFSIG 465 Query: 475 MGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSE 521 + P+ +L + ++ ++ H +P + V+ Sbjct: 466 LAVA-AGPLEEVLRAGAGVLPENGSEVHLAVIP-HLGVPLLASVVTL 510 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.317 0.173 0.538 Lambda K H 0.267 0.0529 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,953,674,356 Number of Sequences: 3077464 Number of extensions: 241644244 Number of successful extensions: 1500186 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 5261 Number of HSP's successfully gapped in prelim test: 4797 Number of HSP's that attempted gapping in prelim test: 1442313 Number of HSP's gapped (non-prelim): 24276 length of query: 526 length of database: 1,040,396,356 effective HSP length: 133 effective length of query: 393 effective length of database: 631,093,644 effective search space: 248019802092 effective search space used: 248019802092 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.8 bits) S2: 96 (41.2 bits)