141 c3b9qA_ Probab=98.68   E-value=4.9e-07  Score=62.56  Aligned_columns=132  Identities=14%

Q ss_pred             HCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEC--CCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCE
Q ss_conf             1996999848988789999999998454299399984--80899999999999995797405416554036740489879
Q batch____        19 CAPQVLLSAPTGAGKSTWLPLQLLAHPGINGKIILLE--PRRLAARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRL   96 (809)
Q Consensus        19 ~~~~vIi~ApTGSGKTt~vpl~ll~~~~~~gkilvl~--PrR~lA~q~a~rva~~lg~~vG~~VGy~vr~e~~~s~~t~I   96 (809)
                      ...+++++||||+||||.+..........+.+++++.  +.|.+|.+..+..+..+|.++-...+..             
T Consensus        97 ~~~vi~~vG~~G~GKTTt~aklA~~~~~~g~~v~li~~Dt~R~gA~eQL~~~a~~~gv~~~~~~~~~-------------  163 (298)
T c3b9qA_          97 KPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAEKAK-------------  163 (298)
T ss_dssp             SCEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEECCCCSCHHHHHHHHHHHHHHTCEEECCCCCC-------------
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCC-------------
T ss_conf             9769999728887655699999999996799179985687674689999999887398089728988-------------


Q ss_pred             EEECCHHHHHHHHCCCCCCCCCEEEEECCCCCCHHCCCCHHHHHHHHHHC------CCCCEEEEEECCC---CHHHHHHH
Q ss_conf             99780799999853986104538998383415831264579999999855------9666499992699---98999998
Q batch____        97 EVVTEGVLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGL------RDDLKLLIMSATL---DNDRLQQM  167 (809)
Q Consensus        97 ~v~T~g~Ll~~L~~d~~L~~~~~VIiDE~HeR~~~~Dl~lall~~~~~~~------r~dlkiIlmSATl---d~~~la~~  167 (809)
                          +-..+..........++++|+||.+ -|+.+-+..+.-++.+....      .++..++++|||.   +.+....|
T Consensus       164 ----~~~~~~~~~~~~~~~~~D~IlIDTa-Gr~~~~~~~~~el~~~~~~~~~~~~~~p~~~~LVl~at~~~~~~~~~~~~  238 (298)
T c3b9qA_         164 ----AATVLSKAVKRGKEEGYDVVLCDTS-GRLHTNYSLMEELIACKKAVGKIVSGAPNEILLVLDGNTGLNMLPQAREF  238 (298)
T ss_dssp             ----HHHHHHHHHHHHHHTTCSEEEECCC-CCSSCCHHHHHHHHHHHHHHHTTSTTCCSEEEEEEEGGGGGGGHHHHHHH
T ss_pred             ----HHHHHHHHHHHHHHCCCCEEEECCC-CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHH
T ss_conf             ----7999999999999679979998188-88877579999999999986303456885289994067757999999998


Q ss_pred             H
Q ss_conf             3
Q batch____       168 L  168 (809)
Q Consensus       168 l  168 (809)
                      +
T Consensus       239 ~  239 (298)
T c3b9qA_         239 N  239 (298)
T ss_dssp             H
T ss_pred             H
T ss_conf             6