145 c1vmaA_ Probab=98.62   E-value=5.6e-07  Score=62.19  Aligned_columns=133  Identities=17%

Q ss_pred             HCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEC--CCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCE
Q ss_conf             1996999848988789999999998454299399984--80899999999999995797405416554036740489879
Q batch____        19 CAPQVLLSAPTGAGKSTWLPLQLLAHPGINGKIILLE--PRRLAARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRL   96 (809)
Q Consensus        19 ~~~~vIi~ApTGSGKTt~vpl~ll~~~~~~gkilvl~--PrR~lA~q~a~rva~~lg~~vG~~VGy~vr~e~~~s~~t~I   96 (809)
                      ...+++++||||+||||.+..........+.++.++.  ++|..|.+..+..+..+|.++-.....              
T Consensus        91 ~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~gA~eQL~~~a~~~~v~~~~~~~~--------------  156 (294)
T c1vmaA_          91 PPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEG--------------  156 (294)
T ss_dssp             SCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCSTT--------------
T ss_pred             CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCC--------------
T ss_conf             966999980688760248999999999679948999758768647999999997619828974883--------------


Q ss_pred             EEECCHHHHHHHHCCCCCCCCCEEEEECCCCCCHHCCCCHHHHHHHHHHCC------CCCEEEEEECCCCHHHHHHHH
Q ss_conf             997807999998539861045389983834158312645799999998559------666499992699989999983
Q batch____        97 EVVTEGVLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLR------DDLKLLIMSATLDNDRLQQML  168 (809)
Q Consensus        97 ~v~T~g~Ll~~L~~d~~L~~~~~VIiDE~HeR~~~~Dl~lall~~~~~~~r------~dlkiIlmSATld~~~la~~l  168 (809)
                        ..+.-+++........+++++|+||.+ -|+..-+..+.-++.+.....      ++..++++|||...+.+....
T Consensus       157 --~~~~~~~~~~~~~~~~~~~d~IlIDTa-Gr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~  231 (294)
T c1vmaA_         157 --ADPAAVAFDAVAHALARNKDVVIIDTA-GRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTGQNGLVQAK  231 (294)
T ss_dssp             --CCHHHHHHHHHHHHHHTTCSEEEEEEC-CCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGHHHHHHHHH
T ss_pred             --CCHHHHHHHHHHHHHHCCCCEEEECCC-CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHH
T ss_conf             --698999999999999779989998188-898785799999999999963035668853999811468789999999