BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (564 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q3Z0N3 Cellulose synthesis regulatory protein n=28 Tax=... 1154 0.0 UniRef50_Q5PLI4 Cellulose synthesis regulatory protein n=77 Tax=... 803 0.0 UniRef50_C9XVB6 Cellulose synthesis regulatory protein n=9 Tax=E... 520 e-146 UniRef50_C8QGL2 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b Re... 397 e-109 UniRef50_Q46VS6 GGDEF n=1 Tax=Ralstonia eutropha JMP134 RepID=Q4... 167 1e-39 UniRef50_Q1LHF7 Diguanylate cyclase (GGDEF domain) n=2 Tax=cellu... 164 9e-39 UniRef50_Q1LM75 Diguanylate cyclase (GGDEF domain) n=2 Tax=Cupri... 149 3e-34 UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 140 2e-31 UniRef50_A1AUD4 Diguanylate cyclase n=1 Tax=Pelobacter propionic... 136 2e-30 UniRef50_Q0EZJ4 GGDEF/response regulator receiver domain protein... 135 4e-30 UniRef50_C5S9J2 Diguanylate cyclase n=1 Tax=Allochromatium vinos... 135 5e-30 UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax... 133 2e-29 UniRef50_Q74EL0 GGDEF domain protein n=1 Tax=Geobacter sulfurred... 130 1e-28 UniRef50_A4TZG0 GGDEF n=1 Tax=Magnetospirillum gryphiswaldense R... 130 1e-28 UniRef50_C0N8C3 GGDEF domain protein n=1 Tax=Methylophaga thioox... 130 2e-28 UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnet... 130 2e-28 UniRef50_Q2BMY9 Putative uncharacterized protein n=1 Tax=Neptuni... 129 2e-28 UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobact... 129 4e-28 UniRef50_C5RGU1 Diguanylate cyclase with TPR repeats n=1 Tax=Clo... 128 6e-28 UniRef50_Q7MFB4 GGDEF family protein n=2 Tax=Vibrio vulnificus R... 128 6e-28 UniRef50_Q2RNW0 Putative diguanylate cyclase (GGDEF domain) n=1 ... 127 8e-28 UniRef50_A6VRQ0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 127 1e-27 UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 127 1e-27 UniRef50_C7HYK2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 126 2e-27 UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydroge... 126 2e-27 UniRef50_UPI0001787F83 diguanylate cyclase with PAS/PAC sensor n... 126 2e-27 UniRef50_B8FIF9 Diguanylate cyclase n=1 Tax=Desulfatibacillum al... 126 3e-27 UniRef50_B6IU63 GGDEF domain protein n=1 Tax=Rhodospirillum cent... 126 3e-27 UniRef50_B9QXQ9 GGDEF domain protein n=1 Tax=Labrenzia alexandri... 125 3e-27 UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with... 125 4e-27 UniRef50_C6WY37 Diguanylate cyclase n=1 Tax=Methylotenera mobili... 125 4e-27 UniRef50_A1SRL2 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 125 4e-27 UniRef50_P54595 Uncharacterized protein yhcK n=2 Tax=Bacillus su... 125 4e-27 UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 68... 125 5e-27 UniRef50_B9JTH1 Two component response regulator n=1 Tax=Agrobac... 125 5e-27 UniRef50_C1DSZ2 Guanylyl cyclase n=2 Tax=Pseudomonadaceae RepID=... 125 6e-27 UniRef50_C9QDN5 Putative uncharacterized protein n=1 Tax=Vibrio ... 125 6e-27 UniRef50_Q1NX84 GGDEF:GAF n=3 Tax=delta proteobacterium MLMS-1 R... 125 6e-27 UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors... 124 8e-27 UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 T... 124 8e-27 UniRef50_C6NZP2 Periplasmic/7TM domain sensor diguanylate cyclas... 124 8e-27 UniRef50_C6BSU0 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 124 9e-27 UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 124 1e-26 UniRef50_Q1K453 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 124 1e-26 UniRef50_A6W0K6 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL... 124 1e-26 UniRef50_Q47X90 GGDEF domain protein n=1 Tax=Colwellia psychrery... 124 1e-26 UniRef50_B8IFL7 Diguanylate cyclase n=1 Tax=Methylobacterium nod... 124 1e-26 UniRef50_D1B7Z4 Sensor protein n=1 Tax=Thermanaerovibrio acidami... 124 1e-26 UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 124 1e-26 UniRef50_A4C957 Putative uncharacterized protein n=1 Tax=Pseudoa... 124 1e-26 UniRef50_Q2W7P3 GGDEF domain n=4 Tax=Magnetospirillum RepID=Q2W7... 124 1e-26 UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 124 1e-26 UniRef50_A6W233 Diguanylate cyclase n=2 Tax=Gammaproteobacteria ... 124 1e-26 UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GC... 123 1e-26 UniRef50_D0IB37 Putative uncharacterized protein n=1 Tax=Grimont... 123 2e-26 UniRef50_Q1K456 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 123 2e-26 UniRef50_B5JTF6 Signaling protein with membrane-bound sensor dom... 123 2e-26 UniRef50_A1SY47 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 123 2e-26 UniRef50_A4BRN6 Putative signal transduction protein n=1 Tax=Nit... 123 2e-26 UniRef50_Q1D1X1 FHA/GGDEF domain protein n=2 Tax=Cystobacterinea... 123 2e-26 UniRef50_B4SPL2 Diguanylate cyclase n=3 Tax=Stenotrophomonas Rep... 123 2e-26 UniRef50_B8I5B8 Diguanylate cyclase n=4 Tax=Clostridium RepID=B8... 123 2e-26 UniRef50_C6NZM9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotr... 122 3e-26 UniRef50_UPI0001AEBF6C diguanylate cyclase n=1 Tax=Alteromonas m... 122 3e-26 UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 122 3e-26 UniRef50_A8ZX32 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 122 3e-26 UniRef50_Q2BLJ7 Putative signal transduction protein n=1 Tax=Nep... 122 4e-26 UniRef50_Q2BLU7 Putative uncharacterized protein n=1 Tax=Neptuni... 122 4e-26 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 122 4e-26 UniRef50_B9L9B5 Sensory box/ggdef domain protein n=1 Tax=Nautili... 122 5e-26 UniRef50_Q02P32 Putative two-component response regulator n=6 Ta... 121 6e-26 UniRef50_Q489Q4 Sensory box/GGDEF domain protein n=1 Tax=Colwell... 121 6e-26 UniRef50_C9YC42 Putative uncharacterized protein n=1 Tax=Curviba... 121 7e-26 UniRef50_D2L986 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW... 121 7e-26 UniRef50_Q0EXC8 Signal transduction protein containing a membran... 121 7e-26 UniRef50_A8IN97 Transcriptional regulator n=1 Tax=Azorhizobium c... 121 7e-26 UniRef50_C5SB80 Diguanylate cyclase n=1 Tax=Allochromatium vinos... 121 7e-26 UniRef50_Q30U30 Diguanylate cyclase (GGDEF domain) n=2 Tax=Campy... 121 8e-26 UniRef50_A4YPK6 Putative diguanylate cyclase (GGDEF) with GAF an... 121 9e-26 UniRef50_Q60BH3 GGDEF domain protein n=1 Tax=Methylococcus capsu... 121 9e-26 UniRef50_C0QTH1 Signal transduction response regulator n=1 Tax=P... 121 9e-26 UniRef50_C7LC06 GGDEF domain protein n=28 Tax=Brucella RepID=C7L... 120 1e-25 UniRef50_Q0AV70 Response regulator receiver protein n=1 Tax=Synt... 120 1e-25 UniRef50_D0IXN6 Diguanylate cyclase n=2 Tax=Comamonas testostero... 120 1e-25 UniRef50_Q1JWQ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 120 1e-25 UniRef50_A8FBD0 ABC superfamily ATP binding cassette transporter... 120 1e-25 UniRef50_Q0AG61 Diguanylate cyclase/phosphodiesterase with PAS/P... 120 1e-25 UniRef50_C9R9C2 Diguanylate cyclase n=1 Tax=Ammonifex degensii K... 120 1e-25 UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Camin... 120 1e-25 UniRef50_A0Y806 Predicted signal transduction protein containing... 120 2e-25 UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 120 2e-25 UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 120 2e-25 UniRef50_C4V482 Possible diguanylate cyclase n=2 Tax=Selenomonas... 120 2e-25 UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkonge... 120 2e-25 UniRef50_B7RWX6 GGDEF domain protein n=1 Tax=marine gamma proteo... 120 2e-25 UniRef50_Q1YM41 Conserved hypothetical membrane protein with GGD... 120 2e-25 UniRef50_C1DD63 Sensor protein n=1 Tax=Laribacter hongkongensis ... 120 2e-25 UniRef50_A0Q289 GGDEF domain protein, putative n=2 Tax=Clostridi... 120 2e-25 UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Breviba... 119 2e-25 UniRef50_A4CAZ6 GGDEF domain protein n=1 Tax=Pseudoalteromonas t... 119 2e-25 UniRef50_A6LN72 Diguanylate cyclase n=2 Tax=Thermosipho RepID=A6... 119 2e-25 UniRef50_A6VTA2 Diguanylate cyclase n=2 Tax=Marinomonas RepID=A6... 119 3e-25 UniRef50_Q085X7 Diguanylate cyclase n=2 Tax=Alteromonadales RepI... 119 3e-25 UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 119 3e-25 UniRef50_C1D269 Putative metal dependent phosphohydrolase n=2 Ta... 119 3e-25 UniRef50_Q1JZ09 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 119 3e-25 UniRef50_B9TNG7 Putative uncharacterized protein n=1 Tax=Ricinus... 119 3e-25 UniRef50_Q31IP8 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 119 3e-25 UniRef50_B9R5N2 GGDEF domain protein n=1 Tax=Labrenzia alexandri... 119 3e-25 UniRef50_B1KER8 Diguanylate cyclase n=1 Tax=Shewanella woodyi AT... 119 3e-25 UniRef50_B2TQF1 Ggdef domain protein n=3 Tax=Clostridium botulin... 119 3e-25 UniRef50_Q3A271 Sensor histidine kinase/FOG: GGDEF domain protei... 119 3e-25 UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, puta... 119 4e-25 UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus L... 119 4e-25 UniRef50_C6CSA8 Diguanylate cyclase n=1 Tax=Paenibacillus sp. JD... 119 4e-25 UniRef50_Q089V9 Diguanylate cyclase n=1 Tax=Shewanella frigidima... 119 4e-25 UniRef50_B1KMS8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 119 5e-25 UniRef50_Q12RA2 Diguanylate cyclase n=1 Tax=Shewanella denitrifi... 118 5e-25 UniRef50_B8CXG9 Diguanylate cyclase n=1 Tax=Halothermothrix oren... 118 5e-25 UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 118 5e-25 UniRef50_A8UWW7 Putative uncharacterized protein n=1 Tax=Hydroge... 118 5e-25 UniRef50_Q0ATH2 Response regulator receiver modulated diguanylat... 118 5e-25 UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliil... 118 6e-25 UniRef50_A3Y6S3 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121... 118 6e-25 UniRef50_C7QE19 Diguanylate cyclase n=1 Tax=Catenulispora acidip... 118 6e-25 UniRef50_A7ZJI1 Diguanylate cyclase (GGDEF) domain protein n=3 T... 118 6e-25 UniRef50_Q30PB2 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 118 6e-25 UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthom... 118 7e-25 UniRef50_A8H680 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8H... 118 7e-25 UniRef50_A4G925 Putative uncharacterized protein n=2 Tax=Hermini... 118 7e-25 UniRef50_UPI0001850FCC diguanylate cyclase n=1 Tax=Bacillus coah... 118 7e-25 UniRef50_A8UT68 Putative uncharacterized protein n=2 Tax=Aquific... 118 7e-25 UniRef50_C1DGF8 GGDEF protein n=1 Tax=Azotobacter vinelandii DJ ... 118 8e-25 UniRef50_A0NNQ3 Intracellular signaling protein (PAS,GAF,GGDEF d... 118 8e-25 UniRef50_A6Q580 Putative uncharacterized protein n=1 Tax=Nitrati... 118 8e-25 UniRef50_Q2RR54 Putative diguanylate cyclase (GGDEF domain) n=2 ... 118 8e-25 UniRef50_C6B066 Diguanylate cyclase n=11 Tax=Rhizobium RepID=C6B... 117 8e-25 UniRef50_B4S2W9 Response regulator containing a CheY-like receiv... 117 8e-25 UniRef50_A6Q191 Putative uncharacterized protein n=1 Tax=Nitrati... 117 9e-25 UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=... 117 9e-25 UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus... 117 1e-24 UniRef50_A4W9V5 Diguanylate cyclase n=1 Tax=Enterobacter sp. 638... 117 1e-24 UniRef50_B5XWN5 Diguanylate cyclase (GGDEF) domain protein n=5 T... 117 1e-24 UniRef50_A6DD54 Diguanylate cyclase (GGDEF domain) n=1 Tax=Camin... 117 1e-24 UniRef50_Q3A5K1 Two component signal transduction response regul... 117 1e-24 UniRef50_A4YQK9 Putative uncharacterized protein n=1 Tax=Bradyrh... 117 1e-24 UniRef50_A4BI17 Putative uncharacterized protein n=1 Tax=Reineke... 117 1e-24 UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromato... 117 1e-24 UniRef50_B9L689 Diguanylate cyclase n=1 Tax=Nautilia profundicol... 117 1e-24 UniRef50_A1SVZ1 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 117 1e-24 UniRef50_C4FJS9 Signal transduction response regulator n=1 Tax=S... 117 1e-24 UniRef50_A8UVB7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 117 1e-24 UniRef50_D2U8Z2 Putative two-component system response regulator... 117 1e-24 UniRef50_A0L7H2 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC... 117 1e-24 UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms R... 117 1e-24 UniRef50_Q1K433 Ammonium transporter n=1 Tax=Desulfuromonas acet... 117 1e-24 UniRef50_Q7M861 SIGNAL TRANSDUCTION RESPONSE REGULATOR-CheY like... 117 2e-24 UniRef50_B4U722 Diguanylate cyclase n=1 Tax=Hydrogenobaculum sp.... 117 2e-24 UniRef50_Q7UWZ9 Putative uncharacterized protein n=1 Tax=Rhodopi... 117 2e-24 UniRef50_Q8D5H8 FOG: GGDEF domain n=2 Tax=Vibrio vulnificus RepI... 117 2e-24 UniRef50_A1VD57 Diguanylate cyclase n=3 Tax=Desulfovibrio vulgar... 117 2e-24 UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas ... 117 2e-24 UniRef50_D0XBU8 Putative uncharacterized protein n=1 Tax=Vibrio ... 117 2e-24 UniRef50_A6LJN4 Response regulator receiver modulated diguanylat... 116 2e-24 UniRef50_A0LAY9 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC... 116 2e-24 UniRef50_O66623 Putative uncharacterized protein n=1 Tax=Aquifex... 116 2e-24 UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum al... 116 2e-24 UniRef50_B9M798 Diguanylate cyclase n=1 Tax=Geobacter sp. FRC-32... 116 2e-24 UniRef50_A8UY37 Predicted signal transduction protein n=1 Tax=Hy... 116 2e-24 UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 116 2e-24 UniRef50_C7I354 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 116 2e-24 UniRef50_A0YPS9 Putative uncharacterized protein n=1 Tax=Lyngbya... 116 2e-24 UniRef50_Q4USH9 Sensor histidine kinase n=3 Tax=Xanthomonas camp... 116 2e-24 UniRef50_A8MM09 Diguanylate cyclase n=2 Tax=Clostridiaceae RepID... 116 2e-24 UniRef50_C5BMJ7 GGDEF domain protein n=1 Tax=Teredinibacter turn... 116 2e-24 UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 116 2e-24 UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgar... 116 2e-24 UniRef50_B5JWA7 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 116 2e-24 UniRef50_B9L5Q2 Diguanylate cyclase n=2 Tax=Nautilia profundicol... 116 3e-24 UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0... 116 3e-24 UniRef50_Q7MRL2 Putative uncharacterized protein n=1 Tax=Wolinel... 116 3e-24 UniRef50_A5W338 Diguanylate cyclase n=3 Tax=Pseudomonas putida R... 116 3e-24 UniRef50_Q3JE99 Response regulator receiver modulated diguanylat... 116 3e-24 UniRef50_A6T2S6 Putative uncharacterized protein n=1 Tax=Janthin... 116 3e-24 UniRef50_A0KFF7 GGDEF family protein n=1 Tax=Aeromonas hydrophil... 116 3e-24 UniRef50_UPI0001850EBC integral membrane sensor signal transduct... 116 3e-24 UniRef50_Q1QZQ8 Diguanylate cyclase n=1 Tax=Chromohalobacter sal... 116 3e-24 UniRef50_C6CBV2 Diguanylate cyclase n=9 Tax=Enterobacteriaceae R... 116 3e-24 UniRef50_A1AK83 Response regulator receiver modulated diguanylat... 115 3e-24 UniRef50_B5SJ67 Signal transduction protein ggdef domain n=4 Tax... 115 3e-24 UniRef50_A8ADN2 Putative uncharacterized protein n=1 Tax=Citroba... 115 3e-24 UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 115 3e-24 UniRef50_D0J5H9 Diguanylate cyclase n=2 Tax=Comamonas testostero... 115 3e-24 UniRef50_B8KPY0 Sensory box/ggdef domain protein n=1 Tax=gamma p... 115 4e-24 UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q... 115 4e-24 UniRef50_Q2B8D4 GGDEF n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2... 115 4e-24 UniRef50_C8S5Q5 Diguanylate cyclase n=1 Tax=Rhodobacter sp. SW2 ... 115 4e-24 UniRef50_B4B5Q6 Response regulator receiver modulated diguanylat... 115 4e-24 UniRef50_B6JIE5 Cellulose synthesis regulatory protein n=1 Tax=O... 115 4e-24 UniRef50_D1RF31 Response regulator diguanylate cyclase (GGDEF) d... 115 4e-24 UniRef50_A4VQF4 GGDEF domain protein n=3 Tax=Proteobacteria RepI... 115 4e-24 UniRef50_C4XS30 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 115 4e-24 UniRef50_A7GXF8 3-deoxy-d-manno-octulosonic-acid transferase n=8... 115 4e-24 UniRef50_C7R6L5 Diguanylate cyclase n=4 Tax=Gammaproteobacteria ... 115 4e-24 UniRef50_C9YAH7 Putative uncharacterized protein n=1 Tax=Curviba... 115 4e-24 UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 115 4e-24 UniRef50_Q8DCJ9 FOG: GGDEF domain n=3 Tax=Vibrio RepID=Q8DCJ9_VIBVU 115 5e-24 UniRef50_Q07Y51 Diguanylate cyclase n=2 Tax=Alteromonadales RepI... 115 5e-24 UniRef50_A3YI97 Sensory transduction/ GGDEF family protein n=1 T... 115 5e-24 UniRef50_Q1K3D5 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 115 5e-24 UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hy... 115 5e-24 UniRef50_C0QM24 Putative uncharacterized protein n=1 Tax=Desulfo... 115 6e-24 UniRef50_A6X0V6 Diguanylate cyclase n=3 Tax=Brucellaceae RepID=A... 115 6e-24 UniRef50_C6DY65 Diguanylate cyclase n=3 Tax=Geobacter RepID=C6DY... 115 6e-24 UniRef50_C8Q7A8 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b Re... 115 6e-24 UniRef50_B9YYN2 Diguanylate cyclase with PAS/PAC and GAF sensors... 115 6e-24 UniRef50_A4JS57 Diguanylate cyclase n=3 Tax=Burkholderia vietnam... 115 6e-24 UniRef50_UPI000185121C diguanylate cyclase n=1 Tax=Bacillus coah... 115 6e-24 UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 115 6e-24 UniRef50_A4B9R1 Predicted signal transduction protein containing... 115 7e-24 UniRef50_C0QPX4 Signal transduction response regulator n=1 Tax=P... 115 7e-24 UniRef50_C9Y711 Putative uncharacterized protein n=1 Tax=Curviba... 114 7e-24 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 114 7e-24 UniRef50_Q12S31 Diguanylate cyclase n=17 Tax=Shewanella RepID=Q1... 114 7e-24 UniRef50_B4WZN3 GGDEF domain protein n=1 Tax=Alcanivorax sp. DG8... 114 7e-24 UniRef50_B2V5Y5 Diguanylate cyclase n=3 Tax=Sulfurihydrogenibium... 114 7e-24 UniRef50_A0KRY2 Diguanylate cyclase n=4 Tax=Gammaproteobacteria ... 114 7e-24 UniRef50_Q98G89 Mll3440 protein n=1 Tax=Mesorhizobium loti RepID... 114 8e-24 UniRef50_UPI0000E11028 response regulator receiver modulated dig... 114 8e-24 UniRef50_A8FZA2 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8F... 114 8e-24 UniRef50_C4XKN6 Putative signaling protein n=2 Tax=Desulfovibrio... 114 8e-24 UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya... 114 8e-24 UniRef50_B7KW39 Diguanylate cyclase n=3 Tax=Methylobacterium ext... 114 8e-24 UniRef50_Q6AJ00 Putative uncharacterized protein n=1 Tax=Desulfo... 114 9e-24 UniRef50_A0P392 GGDEF domain protein n=1 Tax=Labrenzia aggregata... 114 9e-24 UniRef50_Q3SEU1 Putative diguanylate cyclase (GGDEF domain) n=1 ... 114 9e-24 UniRef50_Q1QZQ9 Diguanylate cyclase n=1 Tax=Chromohalobacter sal... 114 9e-24 UniRef50_B2T333 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 114 9e-24 UniRef50_B1Y766 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii... 114 9e-24 UniRef50_A8FHG3 Possible diguanylate cyclase n=2 Tax=Bacillus pu... 114 9e-24 UniRef50_Q47V44 GGDEF domain protein n=2 Tax=Gammaproteobacteria... 114 1e-23 UniRef50_UPI000178A26E diguanylate cyclase with GAF sensor n=1 T... 114 1e-23 UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geob... 114 1e-23 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 114 1e-23 UniRef50_B2V8X7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 114 1e-23 UniRef50_B3E4W4 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 114 1e-23 UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 114 1e-23 UniRef50_Q73IE7 Response regulator/GGDEF domain protein n=20 Tax... 114 1e-23 UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing pr... 114 1e-23 UniRef50_A8LJ58 Response regulator n=1 Tax=Dinoroseobacter shiba... 114 1e-23 >UniRef50_Q3Z0N3 Cellulose synthesis regulatory protein n=28 Tax=Enterobacteriaceae RepID=YEDQ_SHISS Length = 569 Score = 1154 bits (2986), Expect = 0.0, Method: Compositional matrix adjust. Identities = 558/564 (98%), Positives = 562/564 (99%) Query: 1 MQHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHL 60 +QHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHL Sbjct: 6 VQHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHL 65 Query: 61 ENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNR 120 ENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLR+AVTEFEQHRDEHAW+IELNR Sbjct: 66 ENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRNAVTEFEQHRDEHAWQIELNR 125 Query: 121 RRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRA 180 RRTL VNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHN+SSMVEQAMYVSRA Sbjct: 126 RRTLSVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNTSSMVEQAMYVSRA 185 Query: 181 GFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV 240 GFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV Sbjct: 186 GFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV 245 Query: 241 SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGN 300 SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGN Sbjct: 246 SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGN 305 Query: 301 IFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI 360 IFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI Sbjct: 306 IFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI 365 Query: 361 ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA 420 ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA Sbjct: 366 ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA 425 Query: 421 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE Sbjct: 426 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 485 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 540 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ Sbjct: 486 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 545 Query: 541 SLADRRLYLAKQAGRNRVFASDNA 564 SLADRRLYLAKQAGRNRV ASDNA Sbjct: 546 SLADRRLYLAKQAGRNRVCASDNA 569 >UniRef50_Q5PLI4 Cellulose synthesis regulatory protein n=77 Tax=Enterobacteriaceae RepID=YEDQ_SALPA Length = 570 Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/562 (65%), Positives = 466/562 (82%) Query: 1 MQHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHL 60 M HET ++NQ W KKLARR GPGHVVN CF++V+LFSTLLTWREV++L+DAY++SQRNHL Sbjct: 1 MPHETLLDNQGWFKKLARRFGPGHVVNTCFLIVMLFSTLLTWREVMILKDAYVASQRNHL 60 Query: 61 ENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNR 120 +VAN LD+ LQ+N+D+LIFLRNGM EALVAPL F++L+ AVT+FEQ R H W++EL++ Sbjct: 61 GSVANVLDRQLQFNMDRLIFLRNGMHEALVAPLAFSALQSAVTQFEQRRVRHFWQLELDK 120 Query: 121 RRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRA 180 RRTLP+ GVSD V+ LLSRE+ L NE+TA LE+GYL RLA +S+ + + MYVSR+ Sbjct: 121 RRTLPLYGVSDQFVARTTLLSRESRDLANELTATLELGYLARLARSSAMLTLETMYVSRS 180 Query: 181 GFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV 240 GFY+ST PT + ++ +RYY YVTQPWFI SQR N R VRWFTS + ++ + +VT Sbjct: 181 GFYLSTLPTAYGSDIVSRYYQYVTQPWFIEQSQRRNPQRGVRWFTSAQPYVTDEQKKVTA 240 Query: 241 SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGN 300 S+P+D +NYWYGVL M IPV ++Q+FLR+A +K+++GEYQLYD+ LR LT S P+ T N Sbjct: 241 SLPLDHDNYWYGVLAMDIPVASLQRFLRDAAEKDIEGEYQLYDNHLRLLTDSAPEQQTAN 300 Query: 301 IFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI 360 + RE ALLA+ +E DT GG+R+ + YVSWERLDHFDGVL+RVHTL EG++G+FGSISI Sbjct: 301 TLNDRERALLAREIEKDTLGGLRLGTHYVSWERLDHFDGVLLRVHTLREGIQGNFGSISI 360 Query: 361 ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA 420 ALTLLW LFT MLLISW VIR +V NM+VLQ+SLQWQAWHD LTRLYNRGALFEKA LA Sbjct: 361 ALTLLWVLFTAMLLISWGVIRHIVKNMFVLQNSLQWQAWHDPLTRLYNRGALFEKASRLA 420 Query: 421 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 K + + PFSVIQ+DLD+FK++NDRFGHQAGDRVLSHAAGLI S++RA D+AGRVGGEE Sbjct: 421 KRYREARQPFSVIQLDLDYFKSVNDRFGHQAGDRVLSHAAGLIGSTIRAHDIAGRVGGEE 480 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 540 FC++LPGA+ +A ++AERIR ++N+KE+L+ KSTT+RISAS+G+SS+EE GDYDFEQLQ Sbjct: 481 FCIVLPGATKAQALQIAERIRQRINDKEILVTKSTTLRISASMGISSAEEYGDYDFEQLQ 540 Query: 541 SLADRRLYLAKQAGRNRVFASD 562 SLAD+RLY AKQ+GRNR+ ASD Sbjct: 541 SLADKRLYYAKQSGRNRICASD 562 >UniRef50_C9XVB6 Cellulose synthesis regulatory protein n=9 Tax=Enterobacteriaceae RepID=C9XVB6_CROTZ Length = 524 Score = 520 bits (1340), Expect = e-146, Method: Compositional matrix adjust. Identities = 259/521 (49%), Positives = 353/521 (67%), Gaps = 3/521 (0%) Query: 40 LTWREVVVLEDAYISSQRNHLENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLR 99 +TWRE V+L+DA+ISSQRN L+++A A+D++LQY+VDKL+F R GMR A+ L+ Sbjct: 1 MTWREGVILQDAFISSQRNQLDSIATAMDRNLQYSVDKLLFYRAGMRYAMHNLLEGPQTD 60 Query: 100 DAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGY 159 + F R + W + R + GVSDA +++ LL R+ L NE+ A L +G+ Sbjct: 61 AVMAGFNADRHKREWMLPTGRDLAPEIQGVSDAFIAQSTLLERDEALLYNELNATLALGH 120 Query: 160 LLRLAHNSSSMVE-QAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRH 218 +L +A S E + YVSRAGFY++ P ++P YY V+ WF+ S R N Sbjct: 121 MLSIADARSERPEVRTFYVSRAGFYLTNLPFFGHGSIPELYYQQVSSRWFLDQSLRRNPG 180 Query: 219 RAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAI-DKNLDG 277 R VRW + + + + +VT S+P+D N W+GVL M P+ M+ FL+NA+ D + G Sbjct: 181 RGVRWLHGR-DLSMPSGQRVTASIPLDDNGRWFGVLAMDFPIPAMRDFLQNALNDDDSGG 239 Query: 278 EYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHF 337 E L+D +L +T+++ + T F ++ A LA+ ME G RMD+R+++W +LD+F Sbjct: 240 EILLFDRQLSPITTTSSRNDTALHFTAQDKAALARQMELANEGDARMDTRFIAWAKLDYF 299 Query: 338 DGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQ 397 DGVLV+V T+S+ G FG +++ L LLW LFT ML ISW VI MV NM +Q SL+W+ Sbjct: 300 DGVLVKVTTVSQSAEGKFGKVAMVLGLLWLLFTAMLFISWRVIVGMVRNMLTMQRSLKWR 359 Query: 398 AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLS 457 AW+DTLTRLYNRGA FE+AR AK C Q PFSVIQ+DLDHFK+INDR+GHQAGD+VL+ Sbjct: 360 AWYDTLTRLYNRGAFFERARLAAKTCDAQQAPFSVIQLDLDHFKSINDRYGHQAGDKVLT 419 Query: 458 HAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTI 517 AAG++S SLRA+D+AGRVGGEEFC+ILPG A +VAERIR ++N +E+L+ TTI Sbjct: 420 WAAGMLSRSLRAEDIAGRVGGEEFCIILPGTPSEGARQVAERIRQRINSQEILVRPDTTI 479 Query: 518 RISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 RIS S+G+S + GDYDFE LQS+ADRRLYLAKQ GRN V Sbjct: 480 RISVSVGISEALRDGDYDFEHLQSIADRRLYLAKQRGRNLV 520 >UniRef50_C8QGL2 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b RepID=C8QGL2_9ENTR Length = 550 Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust. Identities = 219/549 (39%), Positives = 320/549 (58%), Gaps = 6/549 (1%) Query: 16 LARRLG-PGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANALDKHLQYN 74 L R+ G P V+LCF+ V LFS LT E + L+ +Y QR L + LD Q + Sbjct: 6 LPRQSGNPFLPVHLCFLAVFLFSAFLTVHEALELKTSYEDRQRAQLAEIQKNLDSQFQES 65 Query: 75 VDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALV 134 VD+L++ + + AL+ PLD + R+AV F+ R W+++LN R++P+NGV DA + Sbjct: 66 VDELVYYQKMLSYALMHPLDSDNAREAVQRFQTLRQRPLWQLQLNSPRSMPLNGVGDAWL 125 Query: 135 SEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRN 194 + LL R++ +D EI AALE ++++ + + Y+SRAGFY+S++P + Sbjct: 126 ARDPLLKRDSALIDQEIRAALEFSFIMQFSDPDHDFHSRFWYISRAGFYISSRPPQSPQE 185 Query: 195 VPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVL 254 + Y V + +F ++N +RW TS + + +T+S P+ SN YWYGVL Sbjct: 186 LEQSYATMVQRAYFRALDPQQNISPQLRW-TSGYQGLFDEGLMLTLSAPIISNGYWYGVL 244 Query: 255 GMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSN-PDHPTGNIFDPRELALLAQA 313 M P ++ L L G D K+ +T + PD N +EL Sbjct: 245 SMDFPQARIRNLLAETRHTLLQGNLVFLDRKMNEVTRLHAPDEIPLNAEHRQELL---NR 301 Query: 314 MEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTML 373 M+H+ G +R+ +++ SW +L + DG ++ V TL +G++ + G +++ L +W LF ML Sbjct: 302 MQHERSGILRLGTQFASWSKLTNVDGYIINVQTLKQGMKQELGRVTLFLLSMWLLFILML 361 Query: 374 LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 ++ VI R+V L L W+A +D LTRL NR A FE+ A CQ Q P SVI Sbjct: 362 AVAHQVIFRLVRRQDELSERLTWRANYDGLTRLLNRSAFFEQFVAQAAHCQQLQRPLSVI 421 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEA 493 Q+D+DHFK +ND +GH AGD+ L A +IS +LR DVAGR+GGEEFC++LP +L EA Sbjct: 422 QLDVDHFKKVNDTWGHHAGDQALIRVASVISHTLRKYDVAGRIGGEEFCIVLPETTLAEA 481 Query: 494 AEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 + VAERIR +L K +L+ STT I+ S GV+SSEE GDYD E LQ+ AD RLYLAK Sbjct: 482 SAVAERIRARLAAKTILVNASTTFNITLSAGVTSSEEQGDYDAESLQAKADSRLYLAKTN 541 Query: 554 GRNRVFASD 562 GRNRV ++D Sbjct: 542 GRNRVCSAD 550 >UniRef50_Q46VS6 GGDEF n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46VS6_RALEJ Length = 584 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 159/584 (27%), Positives = 277/584 (47%), Gaps = 41/584 (7%) Query: 7 MENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANA 66 + WL +LA + P VV CF VVLL + ++ R+V ++ + + +++++LE A Sbjct: 6 LPQPRWLPRLAV-MRPHRVVVGCFAVVLLLALVVGLRDVYLVRERDLRARQHNLELRALG 64 Query: 67 LDKHLQYNVDKLIFLRNGMRE--ALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTL 124 ++ L+ +L +L + A D + A+ + R+ W+++L Sbjct: 65 VEAVLEGERRRLEYLSTYAERLFEIQASADAVAPDAAIRQAYAQRNATVWQMKL------ 118 Query: 125 PVNGVSDALVSEGNLLS-RENESLDNEITAALEVGY----LLRLAHNSSSMVEQAMYVSR 179 P++G + V L R + D ++ A L VG LL L+ + + A+++S Sbjct: 119 PLDGPALIGVGPAGLTGLRSFDRRDPDLMADLYVGRMISELLGLSIRADHVQGNAIFISS 178 Query: 180 AGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVT 239 GF+V+ P + P+ + + P++ G + N R + W + S T Sbjct: 179 NGFFVAY-PAIDPAVAPSMMQRFDSMPYYRGQTPEVNPGRELYWVPMYDDFQSKRR-MTT 236 Query: 240 VSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDK-------NLDGEY-QLYDSKLRFLTS 291 +SVP+ + + GV+ + + + + + LR A D N G+ + D +R + Sbjct: 237 LSVPIYAGQQFRGVVAIDVEQKRLDELLRAASDPGAVQYMMNAHGDVLAISDDPVRKVQK 296 Query: 292 SNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGV 351 PD GN D L A+ G ++ D Y+ + R +L+ + + Sbjct: 297 W-PDAVPGNWKDFAPADLFARG-----SGMVKHDGDYLLFHRAPQSPWLLMDLVPARKLY 350 Query: 352 RGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGA 411 F S+S L ++W L +L I+ V+ ++ + L LQ A D LT L NR Sbjct: 351 ASMFASMSRPLLMIWVLLPLLLWITLKVVTQLFDHYIALGEKLQEIARQDPLTGLANRRR 410 Query: 412 LFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQD 471 + E A+ + + P +++ +D+D FK +ND +GH +GD+VL A + ++LR D Sbjct: 411 MRELAQSEFERQKRDGQPLALVMIDIDFFKKVNDHWGHASGDKVLVELARTMRANLRNVD 470 Query: 472 VAGRVGGEEFCVILPGASLTEAAEVAERIRLKL------NEKEMLIAKST-TIRISASLG 524 R+GGEEF V++P SL EAA+ AER+R + + E + ++ IR + S+G Sbjct: 471 QPARLGGEEFAVLMPNTSLAEAAQSAERLRRAIAACVVEADLEACVERADRIIRFTISVG 530 Query: 525 VSSSE-ETGD---YDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 V+ + E D + L ++ADRRLY AK GRNRV + DNA Sbjct: 531 VAEARGEAADGVPMTLDGLAAIADRRLYDAKTQGRNRVVSDDNA 574 >UniRef50_Q1LHF7 Diguanylate cyclase (GGDEF domain) n=2 Tax=cellular organisms RepID=Q1LHF7_RALME Length = 587 Score = 164 bits (415), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 154/574 (26%), Positives = 267/574 (46%), Gaps = 38/574 (6%) Query: 12 WLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANALDKHL 71 WL + A + P VV + F + +L ++ R++ +L + + ++ L V AL Sbjct: 12 WLPRAAL-IYPQRVVVVGFGLAMLLMLVVAMRDLYLLRERVLILHQHDL--VLRALGAEA 68 Query: 72 QYNVD--KLIFLRNGMREALVAPLDFTSLRDAVTEFE-QHRDEHAWKIELNRRRTLPVNG 128 N + KL F+R+ ++ L + D E R+E W++++ P+ G Sbjct: 69 VINAERFKLSFVRDYAQQLLELQQGTKASTDGDIERAYAARNEPVWELQVPLGDA-PIVG 127 Query: 129 VSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQP 188 VS ++ R +E L ++ AA ++ ++L ++ S ++S GFYV T P Sbjct: 128 VSPQILKGLQGFERRDEDLRADLLAARQLSHVLGVSQRSDRPDGTVTFISSNGFYV-TYP 186 Query: 189 TLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNN 248 L P + ++ + +RW + S T+ + T+SVPV Sbjct: 187 ALPPDRAPALIKRFSGIDYYRSLLPDRDPSHEMRWAQVYTQFES-TQLRTTLSVPVYVAQ 245 Query: 249 YWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSN---------PDHPTG 299 + GV+ + + +R ++ + + + L L D + SS PD G Sbjct: 246 RFRGVVAVDLEIRRLRDLI--GLPEILGSHRYLLDRNGNVIVSSQTGGKTNLRWPDDFAG 303 Query: 300 NIFDPRELALLAQAMEHDTRGGIR-MDSRYVSWERLDHFDGVLVRVHTLSE-GVRGDFGS 357 ++ + L++Q G+R ++ +YV ++R+ + G + V TL E V Sbjct: 304 DLRNTPVSDLISQGT------GMRHVNGQYVYFQRVGNA-GNWLMVDTLDEYDVYATVAR 356 Query: 358 -ISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKA 416 +S+ L +W L ++ ++ V+ + + LQ A D LT+L NR E+ Sbjct: 357 RLSLPLLTIWFLLPVLMYVTLRVVTLLFDHYLAAGRKLQQMAETDPLTQLANRRRFSEQF 416 Query: 417 RPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRV 476 + Q P +++ +D+D+FK +ND++GH +GD VL A L+ LR D R+ Sbjct: 417 KKETARRQRDGTPLAMLMLDIDYFKRVNDKWGHASGDCVLMAMADLMRKHLREIDFPARL 476 Query: 477 GGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTT--------IRISASLGVSSS 528 GGEEF V+LPGAS EA AER+RL + + A IR + S+GV+ + Sbjct: 477 GGEEFAVLLPGASSDEAVAAAERLRLAVEAAFVEAAPDAPQPDTGDGRIRFTVSIGVAEA 536 Query: 529 EETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 G + + ++ADRRLY+AK+AGRNRV A+D Sbjct: 537 GTDGCQTLDAMLAVADRRLYVAKEAGRNRVCATD 570 >UniRef50_Q1LM75 Diguanylate cyclase (GGDEF domain) n=2 Tax=Cupriavidus RepID=Q1LM75_RALME Length = 586 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 155/573 (27%), Positives = 255/573 (44%), Gaps = 52/573 (9%) Query: 12 WLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANALDKHL 71 WL + R P + + F +L LL +R +++ DA I S R A +++ L Sbjct: 21 WLALIRR---PRRFILIAFSAAILLILLLIFRGMMLSRDAEIESVRQMQAVRAVSINALL 77 Query: 72 QYNVDKLIFLRNGMREALVAPLDFTSL--RDAVTEFEQHRDEHAWKIELNRRRTLPVNGV 129 Q ++L +RN + + +L D T FE HR++ W L R PV GV Sbjct: 78 QLEAERLTNIRNYAEHLMQIQDELPALFAHDIQTAFE-HRNDDVWA--LRTRDAAPVFGV 134 Query: 130 SDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPT 189 S A ++ + R++ L + A+ + ++ HN + E+ YVS G V+ P Sbjct: 135 SAAQLTGLDGFLRDDAKLIPSMAVAIALSHMFSAGHNEPGLRERIAYVSGNGIIVA-YPA 193 Query: 190 LFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNY 249 + ++V + +F + N R +W ++ E + +S PV + N Sbjct: 194 ISEQDVNPTLRSLASAAYFRNNLPLANPTRKQQWSIAR-SMDDIGESSLFLSAPVYAGNA 252 Query: 250 WYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIF------- 302 + VL + IP ++ + L A +++ L D + +S + G Sbjct: 253 FKAVLILEIPRHSLDESLNVAPHHDVNN--YLVDHNGALVGASMRNVHRGESLASVLINK 310 Query: 303 ---DPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVR------VHTLSEGVRG 353 D +A + A G R+ R + L D V R V LS + Sbjct: 311 WPADKLAVAFRSDAGILSNEHGSRLIYRKLGNSGLIMVDEVSTRELLQASVARLSGAIGA 370 Query: 354 DFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALF 413 G++++ L L + L L Y+ R +L+ A D LT L NR Sbjct: 371 --GAVALGLLLCFTLAIVHTLFGHYIAR---------GEALRTLAETDALTGLANRRVFA 419 Query: 414 EKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVA 473 + C+ P S+I +D+D FK INDR+GH +GD VL A + +++R D+ Sbjct: 420 SRFADAYAWCKRDAVPVSLIMLDIDRFKKINDRWGHASGDVVLRTLADALRANVRNVDLP 479 Query: 474 GRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK------STTIRISASLGVS- 526 R+GGEEF V+LP + +AA +AE++RL L + L+ + + +IR +AS GV+ Sbjct: 480 ARLGGEEFAVLLPRTGIADAANLAEKLRLAL---QALVCEPVDSDDTASIRFTASFGVAQ 536 Query: 527 -SSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + +E G+ D L +AD+RLY AK GRN+V Sbjct: 537 IAPDEPGNLD--SLLMVADQRLYAAKAGGRNKV 567 >UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XPG9_DESMR Length = 368 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/175 (43%), Positives = 101/175 (57%), Gaps = 1/175 (0%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 +S L+ L A D LT L NR FE A + + + P S+I +D+DHFKA+ Sbjct: 182 ISARKALEEELLRLAASDPLTGLANRRGFFEGAARMLGMARRCGTPLSMIMLDIDHFKAV 241 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND +GH AGD VL AG + SLR D+AGRVGGEEF V+ PG L E+AER+RL Sbjct: 242 NDAYGHDAGDAVLRAVAGRLRESLRVSDLAGRVGGEEFAVLCPGTDLAGGVELAERLRLA 301 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 L E ++ A ++++AS GV+ + D + ADR LY AK+ GRNRV Sbjct: 302 L-EDMVVTADCRAVKVTASFGVAQCRDDRDAAPSACLTRADRALYAAKRGGRNRV 355 >UniRef50_A1AUD4 Diguanylate cyclase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUD4_PELPD Length = 380 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 76/173 (43%), Positives = 100/173 (57%), Gaps = 1/173 (0%) Query: 393 SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAG 452 S++ A DTLT + NR E A L +LC+ H+HP S VD+DHFK INDR+GH G Sbjct: 205 SIEHTARIDTLTGIANRFHFSEAAPVLLELCRRHEHPISAFMVDIDHFKQINDRYGHPEG 264 Query: 453 DRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA 512 D V+ A + + LR D+ R GGEEF VILP A VAE +R + EK + + Sbjct: 265 DEVIRLVADSMRTKLRNTDLLARYGGEEFVVILPETPPHAAVGVAESVRRTIAEKALALG 324 Query: 513 KSTTIRISASLGVSSSE-ETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 +IRI+ S+GV+ + D E+L AD RLY AK+ GRNRV A+ A Sbjct: 325 AGRSIRITISIGVAGYDLLPDDIGLEELLKQADTRLYEAKEGGRNRVVAALRA 377 >UniRef50_Q0EZJ4 GGDEF/response regulator receiver domain protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZJ4_9PROT Length = 277 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 76/196 (38%), Positives = 113/196 (57%), Gaps = 11/196 (5%) Query: 379 VIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLD 438 +I R++SNM QS L +QA HD LT LYNR + E+ ++HP++++ +DLD Sbjct: 82 LIWRIISNMKDAQSELHFQASHDVLTGLYNRRYMMEQLYQGVSQATRYRHPYAIVVMDLD 141 Query: 439 HFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 FK +ND +GH AGD+VLS AG++ S+R D+AGR GGEEF V+LP L A + AE Sbjct: 142 RFKQVNDIYGHAAGDKVLSTMAGILRESVRDADIAGRWGGEEFLVLLPHTDLDGARQAAE 201 Query: 499 RIRLKLNEKEMLIAKSTTIRISASLGVSSSEETG-----------DYDFEQLQSLADRRL 547 + ++ + + +I++S S GV+ + D E L LAD+R+ Sbjct: 202 QWLKRVLATPLGVGGGKSIQVSFSAGVAMFDPVNGRPAVKQALNIDQQVETLLHLADKRM 261 Query: 548 YLAKQAGRNRVFASDN 563 YLAK +GR+ V S + Sbjct: 262 YLAKDSGRSCVVVSGD 277 >UniRef50_C5S9J2 Diguanylate cyclase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S9J2_CHRVI Length = 498 Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 75/178 (42%), Positives = 106/178 (59%), Gaps = 6/178 (3%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 +S + +Q L+ ++ D LT LYNR L+++ L ++HP +VI DLD FK I Sbjct: 306 ISELKAIQDELRAASFTDPLTGLYNRRYLYQRLAHEIDLANRYKHPLAVILFDLDLFKRI 365 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND FGH GD VL +G + S +R DVAGR GGEEF VILP A LTEA EVAERIR Sbjct: 366 NDTFGHGVGDDVLVCVSGTLKSCIREVDVAGRHGGEEFLVILPHADLTEATEVAERIRAS 425 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + + + ++A++ ++ G+ + +ADRRLY+AK +GRNR+ A+ Sbjct: 426 VAQISWSVEG-----LAATISGGVAQHCGE-SLDAFLDVADRRLYMAKDSGRNRILAA 477 >UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KAX1_PSEFS Length = 388 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 73/158 (46%), Positives = 99/158 (62%), Gaps = 5/158 (3%) Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D LT L NR A FE A+ L + C+ ++ P + +D+DHFK IND +GHQAGD+VL Sbjct: 232 DELTGLMNRRAFFEHAQVLYEQCRHNRQPLCALMMDMDHFKQINDTYGHQAGDQVLRQIG 291 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRIS 520 G+IS+S R DV GR+GGEEF V+LP SL A +AE++ ++ +A +S Sbjct: 292 GVISASFRQADVYGRLGGEEFAVLLPNTSLDTARTIAEQLVKAISG----LASEPVHGLS 347 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 ASLGV+S+ T D D L + AD+ LY AK GRN+V Sbjct: 348 ASLGVAST-HTQDQDLHGLMNTADKALYRAKAQGRNQV 384 >UniRef50_Q74EL0 GGDEF domain protein n=1 Tax=Geobacter sulfurreducens RepID=Q74EL0_GEOSL Length = 430 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 83/213 (38%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 357 SISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALF--- 413 + +I L +L ++F S++VIRRM + ++ L+ A D LT + NR + Sbjct: 207 TFAILLVVLLSVFGC----SFFVIRRMTERLREAEAELKRIAVTDPLTGIANRRQIIHRA 262 Query: 414 --EKARPLAKLCQTHQHP-FSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQ 470 E AR + + Q P +I D+DHFK IND +GH AGD VL A I S LR Sbjct: 263 TEEFARQMRRKQQRTAVPSLGIIMADVDHFKQINDTYGHSAGDDVLREIASRIGSVLRQY 322 Query: 471 DVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEE 530 D GR GGEEF VIL L E +AERIR ++ + +++ + IR+SASLG+++ Sbjct: 323 DAVGRYGGEEFLVILSETELEETWHIAERIRRRVADDPVVV-DNQVIRVSASLGIATV-L 380 Query: 531 TGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 G+ D+ AD+ LYLAK AGRNRV + + Sbjct: 381 AGEADYRPALERADKGLYLAKTAGRNRVMCAGD 413 >UniRef50_A4TZG0 GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZG0_9PROT Length = 392 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 74/174 (42%), Positives = 103/174 (59%), Gaps = 2/174 (1%) Query: 391 QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ 450 + +L+ A D LT + NR + F KA+ L + Q+ PFSV+ +DLD FKAINDR GH Sbjct: 220 ERTLEHLASVDPLTEVLNRRSFFAKAQGLWQSHQSDGRPFSVLMLDLDRFKAINDRHGHP 279 Query: 451 AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEML 510 GDRV+ A L+ ++R D+ GR+GGEEF +ILPG + +A EVAERIR E+L Sbjct: 280 TGDRVIVAFARLLRDAMRHDDLLGRMGGEEFAIILPGVATAQALEVAERIRAASEAVEVL 339 Query: 511 IAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 +R++ S+G++ + G + L AD LY AK GRNRV + A Sbjct: 340 SDDGFRVRLTVSIGLALGD--GATSLDDLMKRADAALYQAKDQGRNRVVMVEQA 391 >UniRef50_C0N8C3 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N8C3_9GAMM Length = 252 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/187 (37%), Positives = 110/187 (58%), Gaps = 3/187 (1%) Query: 374 LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 + W+VI+ M +++ +++ +++ A +D LT L +R A ++ L L PFS+ Sbjct: 59 FVMWFVIQ-MTLDLHHMENKMRYLASYDDLTELLSRRAFLTSSQKLFSLMNRSHKPFSIA 117 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEA 493 +D+D FK IND +GH AGD VL + ++ R+ D+ GR+GGEEF + LP A Sbjct: 118 YIDIDDFKKINDSYGHAAGDEVLKSFSVILEVHTRSSDLVGRIGGEEFAIALPDTGAHGA 177 Query: 494 AEVAERIRLKLNEKEMLIAKS-TTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQ 552 A V E IR +++E++ML S T+ + S+G+S+S+ EQL ADR LY AK Sbjct: 178 ARVVELIR-EVSEQQMLTTSSKATLSYTISIGISTSDSNKTQTLEQLIQQADRALYEAKV 236 Query: 553 AGRNRVF 559 AG+NR+ Sbjct: 237 AGKNRII 243 >UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384142 Length = 445 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 108/188 (57%), Gaps = 2/188 (1%) Query: 371 TMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPF 430 T LL + ++ V+ LQ L A D+LT + NR E+A + P Sbjct: 256 TGLLTHFVALKEDVTETKRLQEELTRLASQDSLTGIANRRHFLERAHTEIIRAGRAKTPL 315 Query: 431 SVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASL 490 +V+ +D+DHFK IND +GH AGD L A S+LR D+ GR+GGEEF ++ PG L Sbjct: 316 AVLMLDVDHFKKINDEYGHAAGDAALKALADTCRSTLRETDLFGRLGGEEFGILFPGDDL 375 Query: 491 TEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLA 550 A E AER+RL + ++ I + TI I+ASLG+S ++ G+ + S AD+ LY+A Sbjct: 376 NAATEAAERLRLAIAATKITIGGA-TIAITASLGLSLLQD-GEKSIDAALSRADQALYVA 433 Query: 551 KQAGRNRV 558 KQAGRNR+ Sbjct: 434 KQAGRNRL 441 >UniRef50_Q2BMY9 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMY9_9GAMM Length = 610 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 74/177 (41%), Positives = 101/177 (57%), Gaps = 2/177 (1%) Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 RM + + + L A HD LT NR ALF AR + V +DLD+FK Sbjct: 434 RMAAAVETKEKVLTEMASHDPLTGCLNRRALFSAAREELRRASRSGSKLCVCLMDLDYFK 493 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 INDRFGHQ GD VL + +++S LR +D GR+GGEEF V+L G+ L A EVAERIR Sbjct: 494 RINDRFGHQVGDNVLREFSSVVNSCLRVEDKFGRIGGEEFAVLLIGSGLESAVEVAERIR 553 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +++ + + + + ++ S+GVS E FEQ S AD ++Y AK GRN+V Sbjct: 554 MEVMKIALQGIEHEDLEVTVSIGVSEWAEVE--PFEQALSRADEKMYKAKNMGRNQV 608 >UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSY0_9GAMM Length = 261 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 73/192 (38%), Positives = 107/192 (55%), Gaps = 11/192 (5%) Query: 373 LLISWYVIRRMVSNMYV-------LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQT 425 L+I ++V +V N+ +Q L+ A D LT LYNR F+ A K C+ Sbjct: 53 LIIPFFVGTPLVHNLIKSNIKLLRVQKQLEELANKDALTGLYNRQYFFDHANEWDKRCRE 112 Query: 426 HQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVIL 485 + FS++ +D+DHFK+INDRFGH GDRVL + +I +R +D+ R GGEEF +L Sbjct: 113 NSGHFSLLMLDVDHFKSINDRFGHPVGDRVLQRVSNVIKGFMRQEDMCARYGGEEFICLL 172 Query: 486 PGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADR 545 P + A VAERIRL + + L A+ +S S+ + ++ + + + E L AD+ Sbjct: 173 PDTNAAGAKAVAERIRLGMEHQAFLKARG----LSLSVSIGATTMSANDNLETLIERADQ 228 Query: 546 RLYLAKQAGRNR 557 LY AK GRNR Sbjct: 229 ALYEAKDGGRNR 240 >UniRef50_C5RGU1 Diguanylate cyclase with TPR repeats n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGU1_CLOCL Length = 1064 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 70/159 (44%), Positives = 95/159 (59%), Gaps = 4/159 (2%) Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D LT+ Y R AL + + + FS+I D+D FK IND FGHQ GD VLS Sbjct: 731 DKLTKAYTRKALESYMIQQLEHSKNNDEEFSLIIFDVDKFKDINDTFGHQTGDLVLSSIC 790 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRIS 520 +I SS+R D+ GR GGEEF V+LP S EA E+AER+R+K+ E ++L + ++ Sbjct: 791 KVILSSIRKHDICGRYGGEEFIVLLPNTSTNEALEIAERLRIKVEEAKILGDRRD---VT 847 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 SLG+SS G D +L AD+ LY+AK+ GRN+ F Sbjct: 848 ISLGISSYPIHGS-DISKLVKRADQALYMAKETGRNKSF 885 >UniRef50_Q7MFB4 GGDEF family protein n=2 Tax=Vibrio vulnificus RepID=Q7MFB4_VIBVY Length = 387 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 83/198 (41%), Positives = 117/198 (59%), Gaps = 13/198 (6%) Query: 362 LTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKA-RPLA 420 L L+ + T W + R+++N+Y Q+SL+ DTLT +YNR A+ E R L+ Sbjct: 196 LALIMLILTLGFTFPWMINARLITNIY--QTSLR-----DTLTNIYNRRAMEEMIPRELS 248 Query: 421 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 + + S+I +DLDHFK IND++GHQ GD+ LS L++S LR QD++ R+GGEE Sbjct: 249 RASRLGAE-LSIIILDLDHFKRINDQYGHQVGDQTLSGIGQLLTSQLRKQDISFRIGGEE 307 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 540 F V+LP + A VAE++R K+ E + T +AS GV + TGD D++ L Sbjct: 308 FLVVLPDTPIESAVLVAEKLRQKIAETRFAPKQRET--WTASFGV-AQLITGD-DWDALM 363 Query: 541 SLADRRLYLAKQAGRNRV 558 AD LYLAK GRNRV Sbjct: 364 KRADAALYLAKHKGRNRV 381 >UniRef50_Q2RNW0 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RNW0_RHORT Length = 360 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 77/169 (45%), Positives = 100/169 (59%), Gaps = 4/169 (2%) Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 L+ A D LT L NR L + H S++ +DLDHFK+INDR+GH+AGD Sbjct: 194 LETLAKSDPLTGLANRRGLLDAFGGAVLTRSRAPHRLSLLVLDLDHFKSINDRYGHEAGD 253 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 VL H A +I +RA D+ R+GGEEF ++LP L A EVAE+IR K E LI Sbjct: 254 GVLCHVAHVIKGMIRANDLIARIGGEEFALLLPDTDLAGAREVAEKIR-KAIESTALIGP 312 Query: 514 STTIRISASLGVSSSEETGDY-DFEQLQSLADRRLYLAKQAGRNRVFAS 561 ++ ++ S+GV +E Y DF L S AD RLY AK+AGRNRV A+ Sbjct: 313 GGSLSVTVSIGV--AELDPQYPDFAALFSSADHRLYQAKKAGRNRVSAA 359 >UniRef50_A6VRQ0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VRQ0_MARMS Length = 469 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 98/169 (57%), Gaps = 1/169 (0%) Query: 391 QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ 450 Q +LQ +A+ D LT L NRG F++ L L + P +++ +D+DHFK +ND FGH+ Sbjct: 292 QEALQKRAYFDHLTELANRGYFFQQCETLLNLSREKNFPLAILMMDVDHFKKVNDEFGHK 351 Query: 451 AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEML 510 GD VL A + S LR D+ R+GGEEF ++LP EA +AE++R + +L Sbjct: 352 TGDLVLQMLAQMSLSILRRDDLIARIGGEEFAILLPFTEKDEALRIAEQLRESIESSMVL 411 Query: 511 IAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 + + SLGV+ ++ GD + + + AD+ LY AK AGRN VF Sbjct: 412 SLDHQEVVFTVSLGVACRQD-GDCTVDDILNKADKALYQAKAAGRNCVF 459 >UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA9_METML Length = 548 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 1/173 (0%) Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 +L+ L +A D LT L NRG E+A Q +Q ++ +D+D FK IND G Sbjct: 376 LLELELNQKAHIDYLTELNNRGHFMEQAEKELSRSQRYQKDMAMFMMDIDFFKKINDSHG 435 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H+ GD VL A + +LR D+ GR+GGEEF ++LP + EA EVAER+RL + + + Sbjct: 436 HKIGDIVLKKLADVCRQTLREVDIIGRIGGEEFAILLPETNRAEALEVAERLRLAVADSK 495 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + + ++ + S+GVSS + D + + L S AD+ LY AKQ+GRNRV A+ Sbjct: 496 VPMKDGLPVQYTVSIGVSSV-ASADDNIDMLLSRADQALYQAKQSGRNRVCAA 547 >UniRef50_C7HYK2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomonas intermedia K12 RepID=C7HYK2_THIIN Length = 780 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 110/350 (31%), Positives = 167/350 (47%), Gaps = 48/350 (13%) Query: 235 EPQVTVSVPVDSNNY---W--------YGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYD 283 +PQ+ ++VPV+ N++ W Y + GMSI + +L Sbjct: 191 QPQLLIAVPVELNDFLERWRRSVAAAEYAMPGMSIALMRADGYLLA-------------- 236 Query: 284 SKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGI------RMDS----RYVSWER 333 R+ D P + + LA+A H G R+DS R +W R Sbjct: 237 ---RWPAPKTDDLP--RFYSAKRQGELARAARHAPDGATSGVFSGRVDSDDIPRLGAWVR 291 Query: 334 LDHFDGVLVRVHTLSEGVRGDF-GSISIALTLLWALFTTMLLISWYVIRRMV---SNMYV 389 L H+D VLV + + DF + ALT+L AL+ +L +++ ++R+ S Sbjct: 292 LPHYD-VLVNMTVPRALIWRDFWRAYWPALTIL-ALWLAVLTLAYRLVRKQAERDSAQLR 349 Query: 390 LQSSLQWQ-AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 +S + ++ A D+LT L NR + E + + H ++++ DLDHFK IND FG Sbjct: 350 DRSEIMYRLANQDSLTGLLNRRGMGEYLQRAHDRARDHGIGYALVLFDLDHFKLINDGFG 409 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H AGD VL A L+ + +R +D R GGEEF V+LP +SL A AE++R ++ Sbjct: 410 HAAGDAVLQQVAHLLQTRVRKEDQVARWGGEEFLVLLPDSSLQTAHATAEKLRELISHTR 469 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 M + +R++AS GVS+ E G +L D LY AK GRNRV Sbjct: 470 MSVG-GAELRLTASFGVSAWEPGGPLASAELLGQCDSALYNAKAGGRNRV 518 >UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY29_9AQUI Length = 336 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 93/281 (33%), Positives = 149/281 (53%), Gaps = 15/281 (5%) Query: 288 FLTSSNPDHPTGNIFDPRELALLA--QAMEHDTRGGIRMDSRYVSWER-LDHFDGVLVRV 344 + T ++ IF+P E + A E + G + Y +ER ++ + + +R Sbjct: 54 YYTKASSTIADSGIFNPEEFRVPVWWSAFEEASDRGYILIEDYQRYERAVESWKKIGLRS 113 Query: 345 HTLSEGVRGD---FGSISIALTLLWALFTT---MLLISWYVIRRMVSNMYVLQSSLQWQA 398 ++ + GD FGS+S+ + FT +L S I + + + L +A Sbjct: 114 KLVA--ILGDKEPFGSLSVGRVMSSKPFTEEDGKILRSLAFIFSFIVKEELEKKRLLEKA 171 Query: 399 WHDTLTRLYNRGALFEK-ARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLS 457 D LT LYNR L E AR +A+ + + P S+I DLD+FK +ND +GHQ GDRVL Sbjct: 172 IIDHLTGLYNRFYLEEAGAREIAR-AKRYGFPISLIMFDLDNFKQVNDTYGHQVGDRVLV 230 Query: 458 HAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTI 517 A ++SS++R+ D+ R GGEEF V+LP EA +VAERIR + EK + + + Sbjct: 231 KFASIVSSNVRSTDMPVRYGGEEFVVLLPHTYPEEAVKVAERIREEF-EKFLFRFEGEVM 289 Query: 518 RISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 R++ S G+S +G+ +L +AD+ +Y AK+ G+NR+ Sbjct: 290 RLTVSAGISFC-NSGECSLGELIQMADKAMYEAKEKGKNRI 329 >UniRef50_UPI0001787F83 diguanylate cyclase with PAS/PAC sensor n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F83 Length = 539 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/194 (36%), Positives = 107/194 (55%), Gaps = 15/194 (7%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 V++ LQ L+ A++D LTR+YNR + + L ++ P + + D+DHFK I Sbjct: 346 VTDKARLQEELRQMAYYDGLTRIYNRSHFMKLSYALLNQAVRNREPLAFLLFDIDHFKRI 405 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND +GH GD+ L H L +LRA+D+ R GGEEF V +PG S +EA AERIR K Sbjct: 406 NDVYGHDIGDQALQHIVELTRKTLRAEDLFARYGGEEFAVAMPGQSTSEATAAAERIRAK 465 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETG--------------DYDFEQLQSLADRRLYL 549 L + M + ++ I+AS GV++ + + D + +++ ADR LY Sbjct: 466 LLAQPMTTPQG-SLMITASFGVAAVKTSSHNGTVDAEAEEAWWDTELKKVLKQADRALYE 524 Query: 550 AKQAGRNRVFASDN 563 AK++GRN + SD Sbjct: 525 AKRSGRNTIRVSDE 538 >UniRef50_B8FIF9 Diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FIF9_DESAA Length = 249 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/173 (41%), Positives = 100/173 (57%), Gaps = 7/173 (4%) Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQH--PFSVIQVDLDHFKAINDRFGHQA 451 ++ A +D LT LYNR K R ++ ++ + P +DLDHFKA+ND +GHQA Sbjct: 78 MRMLAAYDELTGLYNR--RVGKMRLSEEISRSERRGSPLCAAMLDLDHFKAVNDTYGHQA 135 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GDRVL H + LRA+D+ R GGEE ++PG L +A ++ ER+R + + E L Sbjct: 136 GDRVLRHVCRIFRECLRAEDILIRYGGEEILAVMPGTELEDACDILERLRASVAD-EPLN 194 Query: 512 AKSTTIRISASLGVSSSEETGD--YDFEQLQSLADRRLYLAKQAGRNRVFASD 562 K I ++ S G + E GD D L +LADRRLY+AKQ GRN+V D Sbjct: 195 HKGRCIPVTVSAGAARLHEAGDGPNDAGSLVALADRRLYMAKQKGRNQVVCFD 247 >UniRef50_B6IU63 GGDEF domain protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IU63_RHOCS Length = 315 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/159 (45%), Positives = 102/159 (64%), Gaps = 4/159 (2%) Query: 401 DTLTRLYNRGALFEK-ARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHA 459 D LT L NR L+E+ R + + +T + PF + DLD FK++ND +GH AGDRVL Sbjct: 147 DPLTGLRNRTGLYEELEREMNRFRRTGR-PFCIALCDLDRFKSVNDTYGHDAGDRVLVAT 205 Query: 460 AGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRI 519 AG ++ +R D A R+GGEE ++L ASLTE A V ER+R + +++LIA +I + Sbjct: 206 AGAVNRGIRNFDEAFRLGGEEILILLKDASLTEGAGVLERLRADIAAQQVLIADGRSISV 265 Query: 520 SASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +AS GV+ ++ T E L S+ADR LY AK+AGRNRV Sbjct: 266 TASFGVAEADLT--VHPEDLPSIADRALYEAKRAGRNRV 302 >UniRef50_B9QXQ9 GGDEF domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QXQ9_9RHOB Length = 398 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 76/165 (46%), Positives = 98/165 (59%), Gaps = 7/165 (4%) Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTH--QHPFSVIQVDLDHFKAINDRFGHQA 451 L+ QA HD LT + NRGA+F ++LC+ Q P VI DLDHFK+INDRFGH A Sbjct: 231 LKDQAMHDALTGVLNRGAIFNLLE--SELCKAARTQAPLVVIMADLDHFKSINDRFGHLA 288 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GD VL A I +LR D GR GGEEF ++L G A +VAERIR + E++ Sbjct: 289 GDEVLRTVAATIKDTLRGYDHVGRYGGEEFLILLSGTDTNMAVDVAERIRGTVANLEIM- 347 Query: 512 AKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRN 556 K IR + S G++ S+ +G EQ+ + AD LY AK+ GRN Sbjct: 348 HKDGPIRPTISQGLALSDPSGTA--EQVIARADAALYKAKEDGRN 390 >UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM57_9PROT Length = 461 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/176 (39%), Positives = 101/176 (57%), Gaps = 2/176 (1%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 V+ + L+ L+ A D LT L NR A +AR + H P SV+ +D+DHFK++ Sbjct: 283 VTESHRLRQELERLATTDPLTGLSNRRAFLMRAREEVERAVRHDRPMSVVMIDVDHFKSV 342 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLR-AQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 NDR+GH GD VL A + +LR + DVA R GGEEF ++LP +++ A ++AERIR+ Sbjct: 343 NDRYGHDIGDLVLQDVAATVQGALRNSGDVAARFGGEEFVLLLPETTVSGAQQLAERIRV 402 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 E+ + + +R +AS GV D + + AD LY AK+AGRNRV Sbjct: 403 AF-ERTAVETEQGAVRFTASFGVDVFRSDMDTGIDTVLKRADDALYRAKEAGRNRV 457 >UniRef50_C6WY37 Diguanylate cyclase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WY37_METML Length = 395 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 68/177 (38%), Positives = 105/177 (59%), Gaps = 9/177 (5%) Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 R+++++Y + S D LT NR + E+A L C P +++ +D+D FK Sbjct: 216 RLIADVYQMAS-------RDALTGAMNRRRIEEEAVRLRARCIRTGEPLAIMMIDIDFFK 268 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 +INDR+GH AGD+VL A + S+RA+D R GGEEFC++L + +EA ++AER+R Sbjct: 269 SINDRYGHPAGDKVLRAIADIAQKSIRAEDYFARYGGEEFCMLLTSTTESEALDLAERLR 328 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 L E + + K + I+ S+GV+ S G +F + + AD+ LY AK+ GRNRV Sbjct: 329 LAFAEFTLTLGKE-QLNITVSIGVADSSMVG-LEFADMVTAADKALYCAKENGRNRV 383 >UniRef50_A1SRL2 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRL2_PSYIN Length = 611 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 66/158 (41%), Positives = 98/158 (62%), Gaps = 2/158 (1%) Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D LT + NR A FE K ++ +++ +DLDHFK+IND +GH AGD L A Sbjct: 452 DPLTNMLNRRAFFECGSVEIKRSLRYKSSLAIMMIDLDHFKSINDNYGHAAGDNALLSVA 511 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRIS 520 + + +R D+ GR+GGEEF VI+P A L A E+A+R+RL + + E++I + ++I+ Sbjct: 512 NTLKAMIRNVDIIGRIGGEEFAVIIPHADLEIATELAQRLRLGIEKVEIII-DNQPVKIT 570 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 A GV+S + + E L+ AD+ LYLAK+ GRNRV Sbjct: 571 ACFGVTSIDIKSESLDEALKR-ADKALYLAKENGRNRV 607 >UniRef50_P54595 Uncharacterized protein yhcK n=2 Tax=Bacillus subtilis group RepID=YHCK_BACSU Length = 359 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 115/204 (56%), Gaps = 11/204 (5%) Query: 365 LWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPL-AKLC 423 W + ++S Y+I +N ++L ++QA D LT +YNR E + L + Sbjct: 160 FWIISIAGGMLSLYIIDHE-TNAHLLFKQYKFQAHFDFLTGVYNRRKFEETTKALYQQAA 218 Query: 424 QTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCV 483 T F++I +D+DHFK IND++GH GD+VL + ++R D A R+GGEEF V Sbjct: 219 DTPHFQFALIYMDIDHFKTINDQYGHHEGDQVLKELGLRLKQTIRNTDPAARIGGEEFAV 278 Query: 484 ILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVS----SSEETGDYDFEQL 539 +LP SL +AA +AERIR +++ +++ + ++ SLG + ++E+ G L Sbjct: 279 LLPNCSLDKAARIAERIRSTVSDAPIVLTNGDELSVTISLGAAHYPNNTEQPGS-----L 333 Query: 540 QSLADRRLYLAKQAGRNRVFASDN 563 LAD+ LY AK+ GRNRV S+ Sbjct: 334 PILADQMLYKAKETGRNRVCFSEK 357 >UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55906_SYNY3 Length = 768 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 67/172 (38%), Positives = 103/172 (59%), Gaps = 1/172 (0%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L+ L+ Q+ D LT+L+NR L ++ + H + V+ +D+DHFK ND GH Sbjct: 592 LREQLEEQSLRDPLTKLFNRRYLEQRLSQELARAKRHHYSVGVLMIDVDHFKRFNDSLGH 651 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 AGDR+L+ L+ +++R DVA R GGEE +ILP A+L EA++ AE +R + E ++ Sbjct: 652 DAGDRILASIGTLLKNNIRTSDVACRYGGEEITIILPDATLEEASQKAEFLRQAIAEMKI 711 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + ++AS GV+ + G+ E +Q +AD+ LY AKQAGRNRV + Sbjct: 712 EYSGKIVNSVTASFGVACYPDHGETGQEIIQ-IADKALYDAKQAGRNRVIVA 762 >UniRef50_B9JTH1 Two component response regulator n=1 Tax=Agrobacterium vitis S4 RepID=B9JTH1_AGRVS Length = 296 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 75/181 (41%), Positives = 105/181 (58%), Gaps = 7/181 (3%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQH--PFSVIQVDL 437 + +V+ + +L QA D LT L NR F AR L +T + P ++ DL Sbjct: 110 VSALVTELDCSLKTLTLQANTDPLTGLANRR--FILARGTEALDETRRSGDPMCLLLFDL 167 Query: 438 DHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVA 497 DHFK IND FGH+ GD+ L AA I S+LR D+AGR+GGEEFCV+LPG +L +A +A Sbjct: 168 DHFKGINDAFGHETGDKALIAAAQTIRSNLRPNDLAGRIGGEEFCVLLPGTNLVQAQAIA 227 Query: 498 ERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 ER+R L + + + RI+AS G++ S + F++ + D LY AKQ GRNR Sbjct: 228 ERLRTCL--ENICLEPLAPGRITASFGLAQSADHFS-TFQKFMAATDMALYRAKQHGRNR 284 Query: 558 V 558 + Sbjct: 285 I 285 >UniRef50_C1DSZ2 Guanylyl cyclase n=2 Tax=Pseudomonadaceae RepID=C1DSZ2_AZOVD Length = 415 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 96/166 (57%), Gaps = 5/166 (3%) Query: 398 AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLS 457 A+ D LT + NR A L C P +++ DLDHFK +ND GH GD L Sbjct: 255 AYRDPLTDIGNRRAFTSGGEVLLARCAAEGRPAALLLCDLDHFKRLNDTHGHAMGDAALV 314 Query: 458 HAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTI 517 L++ +R QD+ GR+GGEEF +LPGA T + +VAERIR +E + + Sbjct: 315 AFGRLLALGVRQQDICGRIGGEEFACLLPGADRTVSLQVAERIRQACSELSL----EPGV 370 Query: 518 RISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 R+S S+GV+SSE+ G YD +L +L+D+ LY AK GR+RV S + Sbjct: 371 RVSVSIGVASSEQAG-YDLSRLLALSDQALYRAKANGRDRVECSAD 415 >UniRef50_C9QDN5 Putative uncharacterized protein n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QDN5_VIBOR Length = 457 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 73/192 (38%), Positives = 110/192 (57%), Gaps = 10/192 (5%) Query: 375 ISWYVIRRMVSNMYVLQSS----LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPF 430 IS ++++R++ N +++ L +A D LT+L NR FE +L Q P Sbjct: 265 ISAFIVQRIIVNDCAARNAYEQKLYLEATTDPLTKLSNRRHFFEIGE---QLVQNEMEPL 321 Query: 431 SVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASL 490 +V+ +D+DHFK IND +GHQ GD LS A + +RA D+ GR+GGEEF +IL L Sbjct: 322 AVVIIDIDHFKKINDNYGHQVGDLALSRFAEMCCREIRASDIIGRIGGEEFAIILLNVDL 381 Query: 491 TEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLA 550 EV ERIR ++ E ++ +++ ++ SLGV+ S++ + E L AD LY A Sbjct: 382 AIVNEVTERIRKRVAESN-FNSEVSSLSMTISLGVALSDQA--HTLEHLIKRADGALYQA 438 Query: 551 KQAGRNRVFASD 562 K +GRNRV S+ Sbjct: 439 KVSGRNRVVISE 450 >UniRef50_Q1NX84 GGDEF:GAF n=3 Tax=delta proteobacterium MLMS-1 RepID=Q1NX84_9DELT Length = 488 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 68/163 (41%), Positives = 106/163 (65%), Gaps = 3/163 (1%) Query: 397 QAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVL 456 +A HD LT LYNR L + R + + P +++ +DLDHFK +ND +GH GDRVL Sbjct: 196 EAMHDELTGLYNRRYLQDSGRRELHKAERARQPVALLLLDLDHFKEVNDYWGHLRGDRVL 255 Query: 457 SHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTT 516 AGL+ +LR DV R GGEEF V+LP + EA ++A+++R +L E+++++ + Sbjct: 256 RELAGLLRCNLRQSDVPARYGGEEFVVLLPDTASGEAGQLADKLR-RLVEEQLVLEEGEE 314 Query: 517 IR-ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 R ++A++GV++ G+ + E+L ++ADRRLY K AGRN+V Sbjct: 315 RRLVTATIGVAAYPADGN-NLEELLAVADRRLYAGKTAGRNQV 356 >UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGI8_CYAP7 Length = 1079 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 69/169 (40%), Positives = 103/169 (60%), Gaps = 1/169 (0%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L+ SL+ Q+ D+LT LYNR + E + L Q QH +I +D+DHFK ND FGH Sbjct: 903 LRESLKAQSIKDSLTDLYNRRYMEESLKREISLAQRKQHSVGLIMIDVDHFKEFNDTFGH 962 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 +AGD VL + + ++R+ D+A R GGEEF +ILP ASLT++ + AE+IR + + + Sbjct: 963 KAGDLVLQEVSNFLMINVRSGDIACRYGGEEFLLILPEASLTDSQQRAEQIRQGIKQLDF 1022 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + ++ S+GV+S + G + +QL AD LY AK+ GR+RV Sbjct: 1023 KRYDQSFRSVTVSVGVASFPDHGTNN-DQLIQAADTALYQAKKQGRDRV 1070 >UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C0K6_ACAM1 Length = 449 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 73/180 (40%), Positives = 103/180 (57%), Gaps = 1/180 (0%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 M + + Q L A D LT +YNR + Q +HP S+I VD+DHFK Sbjct: 251 MANQLEQSQQDLYRLATLDGLTEVYNRREFNRWLLVEIERSQRGEHPVSLIMVDIDHFKR 310 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 +ND +GHQAGD L A L+ +R D+ R GGEEF VILP A+ ++ +AERIRL Sbjct: 311 LNDTYGHQAGDLALCEVAQLLQREVRPGDIVCRYGGEEFGVILPKATSADSWVIAERIRL 370 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + EK +++ I ++ASLGV++ + D E+L AD+ LY AK GRNRV +++ Sbjct: 371 AIAEKSVVLPSQQHIDMTASLGVATYPDHADCK-ERLVKQADQALYTAKYQGRNRVHSAE 429 >UniRef50_C6NZP2 Periplasmic/7TM domain sensor diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZP2_9PROT Length = 570 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 65/162 (40%), Positives = 99/162 (61%), Gaps = 3/162 (1%) Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D LT L NR A E A P A H+ P S++ +D+DHFK+IND++GHQ GD VL+ A Sbjct: 410 DALTHLNNRRAFMELALPYASTAGRHERPMSLVMMDIDHFKSINDQYGHQTGDLVLTAVA 469 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRIS 520 L+ + R D+ R GGEEF ++LP L +A AER+R + E + + + T+I ++ Sbjct: 470 DLLKNFSRTSDIVARWGGEEFILLLPETGLKQAINHAERLRQAIAEFRIPVGE-TSISLT 528 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 AS G+++ + F+++ AD +LY AK++GRN+V S Sbjct: 529 ASFGIAA--HVANLSFDKMIEQADVQLYEAKRSGRNKVCCSS 568 >UniRef50_C6BSU0 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BSU0_DESAD Length = 333 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 71/178 (39%), Positives = 104/178 (58%), Gaps = 2/178 (1%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 V+ + + S L Q D+LT LY R LF + R + + P SVI +D+D+FK + Sbjct: 156 VAAISIENSRLFRQTIEDSLTGLYMRRYLFIRMREEIQRFKRRGGPLSVIMIDVDNFKNV 215 Query: 444 NDRFGHQAGDRVLSHAAGLI-SSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 ND +GH GD VL ++ +S + D+ R GGEEF +++PG+ EA VAERIR Sbjct: 216 NDTYGHATGDAVLRSVGHILHENSRQGVDIPCRYGGEEFVILMPGSEKREAEIVAERIRA 275 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 E + A I+I+AS G++S EE + + L ++AD+RLY AK++GRNRV A Sbjct: 276 AC-EDATISAPEGKIKITASCGIASVEECQEPSADALLNIADKRLYCAKESGRNRVVA 332 >UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B886_9CHRO Length = 1121 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 68/169 (40%), Positives = 99/169 (58%), Gaps = 1/169 (0%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L+ SL+ Q+ D+LT LYNR + E + L Q QHP +I +D+DHFK ND FGH Sbjct: 947 LRESLESQSIKDSLTGLYNRRYMEESLKREINLAQRKQHPVGLIMIDVDHFKQFNDNFGH 1006 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 +AGD +L + +++R+ D+A R GGEEF +ILP ASL+++ + AE+IR + + Sbjct: 1007 KAGDLILHEVGNFLMANVRSGDIACRYGGEEFLLILPEASLSDSQQRAEQIRKGIKQLNF 1066 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 S ++ S+GV+ G +QS AD LY AK GR+RV Sbjct: 1067 QQYNSAFTSLTVSIGVACFPAHGKQGETLIQS-ADMALYQAKNQGRDRV 1114 >UniRef50_Q1K453 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K453_DESAC Length = 481 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 113/202 (55%), Gaps = 10/202 (4%) Query: 360 IALTLLWAL---FTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKA 416 I LTLL + FT ++ ++ +M N Y Q L+ A D LTR+ NR A+ Sbjct: 281 IRLTLLINVAICFTVTFIV--IILTQMTINRY--QKRLEEMALTDKLTRIANRQAIDLHL 336 Query: 417 RPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRV 476 + L K Q HQ PFSVI DLD+FK IND GH AGD VL + A ++++ LR DV GR Sbjct: 337 QQLFKEQQRHQVPFSVILFDLDNFKQINDTHGHIAGDAVLQNIANIVTTELRDCDVVGRW 396 Query: 477 GGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDF 536 GGEEF V+L L +A + AE IRL + + + T+ +AS GV + D++ Sbjct: 397 GGEEFLVLLKHCQLDDALKRAESIRLAIQSYAIGFEEQ-TLYTTASFGVVEYRDQDDHN- 454 Query: 537 EQLQSLADRRLYLAKQAGRNRV 558 L AD+ LY+AKQ G+NR Sbjct: 455 -TLLKRADQALYIAKQNGKNRC 475 >UniRef50_A6W0K6 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W0K6_MARMS Length = 556 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/241 (35%), Positives = 126/241 (52%), Gaps = 13/241 (5%) Query: 318 TRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISW 377 T I+ R V+++ D L+ V +LS ++ S+ LT +L +++ Sbjct: 325 TAKSIQQGDRKVTFQS----DSKLIEVASLSRSLQEMMSSL---LTREQSLMQMNVMLET 377 Query: 378 YVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDL 437 V R + + SL+ A D LT +YNR AL E + Q + PF+VI +D Sbjct: 378 KVKNR-TAELEASNRSLEAIARKDPLTHIYNRLALDEALHKEYRQAQESKCPFAVIMIDA 436 Query: 438 DHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVA 497 DHFK +ND FGH GD VL A L++ + + + R GGEEF V+LP + EA +A Sbjct: 437 DHFKRVNDSFGHTVGDLVLQKIAKLLTVQVGDKGIVARFGGEEFTVLLPNMNADEAKNIA 496 Query: 498 ERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 E IR L ++EM S + ++AS GV+ E D +EQ+ + AD LY AK+ GRNR Sbjct: 497 EMIREALEKEEM----SDGLYVTASFGVAMY-EIDDSHYEQVLNRADAALYKAKEQGRNR 551 Query: 558 V 558 V Sbjct: 552 V 552 >UniRef50_Q47X90 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47X90_COLP3 Length = 364 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/158 (41%), Positives = 93/158 (58%), Gaps = 2/158 (1%) Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D LT +YNR FE ++ L Q P S+I +D+D FK +ND +GHQAGD +L Sbjct: 207 DNLTNIYNRRYFFEMSKKLIATAFREQKPVSLIMLDIDLFKRVNDNYGHQAGDCILIDLV 266 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRIS 520 + +R DV R+GGEEF ++L SL A +AE++RL + E ++ I +T+I I+ Sbjct: 267 KELEKVMRKSDVFARIGGEEFTILLNNTSLEGAKVIAEKMRLTI-ENKVFIYNTTSIDIT 325 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 S+GVS T + E L AD++LY AK GRNRV Sbjct: 326 ISIGVSEL-NTENTSIEDLYKQADKQLYRAKHKGRNRV 362 >UniRef50_B8IFL7 Diguanylate cyclase n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IFL7_METNO Length = 628 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 76/184 (41%), Positives = 99/184 (53%), Gaps = 12/184 (6%) Query: 379 VIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQT----HQHPFSVIQ 434 V++ + + S L+ QA D LT L NR R L +L Q+ +I Sbjct: 423 VLQGKIEERATMTSELRVQAETDGLTGLLNR-------RMLDRLAQSPPGSADDKVCLIL 475 Query: 435 VDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAA 494 +D+DHFKAIND +GH GDRVL A L+ S LRA DV R GGEEF V++PGA L+ A Sbjct: 476 IDIDHFKAINDTYGHATGDRVLIQMAELLQSVLRASDVIARFGGEEFAVLVPGADLSGAI 535 Query: 495 EVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAG 554 VA ++R+ L T +R++AS GV+ G + L LAD LY AK G Sbjct: 536 TVARKVRIALQRARFTTPDGTPVRVTASFGVARGRR-GQEAWPCLVELADEALYRAKSDG 594 Query: 555 RNRV 558 RNRV Sbjct: 595 RNRV 598 >UniRef50_D1B7Z4 Sensor protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B7Z4_THEAS Length = 917 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 79/182 (43%), Positives = 109/182 (59%), Gaps = 7/182 (3%) Query: 382 RMVSNMYVL--QSSLQWQAWHDTLTRLYNRGALFE-KARPLAKLCQTHQHPFSVIQVDLD 438 R++S V+ Q L++ A HD LT L NR A+ E + R +A+ + SV +D+D Sbjct: 736 RVLSGTRVMEVQRKLRFMARHDQLTGLLNRRAVIEMEEREMARSVR-EGGSLSVAMMDID 794 Query: 439 HFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 FKAIND +GH AGD+VL A + S LR DV GR GGEEF +ILPGASL +A + E Sbjct: 795 RFKAINDTYGHLAGDQVLREVARRVGSKLRVYDVVGRYGGEEFLLILPGASLGDAKRLCE 854 Query: 499 RIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 R+R + E ++ I ++AS GV +E +QL +LAD+ LYLAK +GR+ V Sbjct: 855 RMRSAIG-SEPVLYDGLQIPVTASFGV--AEFVPQLTVDQLNNLADQALYLAKASGRDAV 911 Query: 559 FA 560 A Sbjct: 912 RA 913 >UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U4U5_MARAV Length = 571 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 106/205 (51%), Gaps = 3/205 (1%) Query: 359 SIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARP 418 + + ++ T +IS+ + +++ ++ Q L+ QA D LTRL+NR + Sbjct: 362 GVGIGIVLEALTLAFIISYRI--KVLEDIRSKQDELKRQASTDPLTRLFNRRYFMAEGEY 419 Query: 419 LAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGG 478 + + +T P SVI +D+DHFKA+ND GH GD VL A + R +D+ R GG Sbjct: 420 VLEQARTSGEPLSVIAIDIDHFKAVNDTHGHNVGDLVLVEVASVFRQFSRDRDLVARFGG 479 Query: 479 EEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQ 538 EEF ++LPGA LTE AERIR + + +R++ S+GV+ + E Sbjct: 480 EEFVILLPGADLTEGFGCAERIRNAVEAMVIDGGDGLAVRVTVSVGVAEVNPLLE-SVEG 538 Query: 539 LQSLADRRLYLAKQAGRNRVFASDN 563 ADR LY AK GRNRV D Sbjct: 539 AVKRADRSLYEAKAGGRNRVCGFDG 563 >UniRef50_A4C957 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C957_9GAMM Length = 639 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 76/195 (38%), Positives = 106/195 (54%), Gaps = 6/195 (3%) Query: 364 LLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLC 423 L+ +LF +L++ + R V + L A D+LT+L NR F A+ + K Sbjct: 446 LVNSLFAAILILLSVFVYRQVK----VSKRLNRLANTDSLTQLANRRYTFHFAKIVFKEA 501 Query: 424 QTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCV 483 Q Q P S+I D+DHFK IND +GH GD VL A + LR D+ GR+GGEEF V Sbjct: 502 QIEQKPLSIIIFDIDHFKRINDNYGHPFGDEVLMAVADKAQAGLREPDLLGRIGGEEFMV 561 Query: 484 ILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLA 543 +L + +A E+AER+R +L + A ++++AS GV+ D DF L A Sbjct: 562 VLKNTPINQAVEIAERMR-ELIAQLSFAAAQQQVKVTASFGVAQFNVDVD-DFGSLFQHA 619 Query: 544 DRRLYLAKQAGRNRV 558 D LY AK AGRN+V Sbjct: 620 DEALYRAKNAGRNQV 634 >UniRef50_Q2W7P3 GGDEF domain n=4 Tax=Magnetospirillum RepID=Q2W7P3_MAGSA Length = 395 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/168 (44%), Positives = 95/168 (56%), Gaps = 3/168 (1%) Query: 393 SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAG 452 SL A D LT + NR + A +LC SV+ +D+D+FK +ND FGH AG Sbjct: 214 SLLRMATIDQLTGIPNRAHFLDLAEDRRRLCLRSGQAVSVVMMDVDYFKRVNDEFGHSAG 273 Query: 453 DRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA 512 D VL + LR DV GR+GGEEF ++LPG SL A VA+R+R L E+ A Sbjct: 274 DEVLRRVGCALREHLRDVDVFGRLGGEEFAIVLPGTSLAAAVPVADRLRAILAGLEVETA 333 Query: 513 KSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 K TT RI+ S+G+ ++ G E S AD RLY AK AGRN+V A Sbjct: 334 KGTT-RITVSMGI--ADLGGGRSLELAMSEADGRLYRAKAAGRNKVVA 378 >UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U7E6_MARAV Length = 405 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/169 (40%), Positives = 92/169 (54%), Gaps = 1/169 (0%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 LQ L A D LT LYNR A E Q PF++I DLDHFK +NDR+GH Sbjct: 218 LQDELSEIARIDPLTGLYNRRAFDECCDIEFSRAQRSGAPFAIIMCDLDHFKRVNDRYGH 277 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 GD VL A + +R DV R GGEEF ++LPG + EVAE++R K + ++ Sbjct: 278 HVGDEVLRRFANTLKEHIRKHDVVARFGGEEFVLLLPGKDTEQGLEVAEKLRAKTADTQI 337 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 I + +SAS GV+ + + D ++ + AD LY AK+ GRNRV Sbjct: 338 TIGDDVCLTLSASFGVAHYDSS-DREWSAVLHRADNALYAAKKQGRNRV 385 >UniRef50_A6W233 Diguanylate cyclase n=2 Tax=Gammaproteobacteria RepID=A6W233_MARMS Length = 426 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 68/179 (37%), Positives = 103/179 (57%), Gaps = 2/179 (1%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 + + ++ +L L++ A D+LT + NRG+ FE A+ L +L Q + S I +DLD Sbjct: 248 VAKRTEDLQILNEKLKYLATRDSLTDVLNRGSFFETAQQLLELSQRQKSKASFILMDLDF 307 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK IND +GH GD+VL H + LR D+ GRVGGEEF + LP L A ++A++ Sbjct: 308 FKRINDTYGHFIGDKVLIHFTQTLQGFLRKSDLLGRVGGEEFAIFLPDTGLDAACQLADK 367 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 IR +++ + + + T+ + SLGV SS D ++L D +LY AK GR+RV Sbjct: 368 IRQTISDAALEV-EGKTVTYTVSLGVESSGPE-DQLIDELFKRVDLKLYGAKDKGRDRV 424 >UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GCU4_GEOUR Length = 422 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 2/189 (1%) Query: 372 MLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFS 431 +L I++++ R+V N+ + Q L+ A D LT L NR + ++ + P Sbjct: 235 LLGITYFLTWRLVLNLDMAQKHLKRLASTDELTGLKNRRQIMKRLDEEYQRAIRLGEPLC 294 Query: 432 VIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLT 491 +I +DLDHFK IND +GH GD VL AG + +LR DV GR+GGEEF ++ PG + Sbjct: 295 LIMLDLDHFKKINDTYGHPFGDLVLKCVAGHMKKALRRYDVLGRIGGEEFLIVSPGTTRE 354 Query: 492 EAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAK 551 EA +A+R+R + E E + + + I+ S GV+ + GD + E L AD LY+AK Sbjct: 355 EAVVLAQRLRSTV-EMEKIAYEDKKVTITVSCGVAFLYK-GDDNVEILLKRADSALYIAK 412 Query: 552 QAGRNRVFA 560 Q GRNRV A Sbjct: 413 QEGRNRVVA 421 >UniRef50_D0IB37 Putative uncharacterized protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IB37_VIBHO Length = 294 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/199 (36%), Positives = 112/199 (56%), Gaps = 3/199 (1%) Query: 366 WALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQT 425 +AL+ ++ + VI S ++++ L A D LT +YNR L A+ + + Sbjct: 80 FALYWLQTVVGFLVIWAQTSKLHMMLR-LYRHATLDPLTGIYNRRMLLTLAKRDFENTRI 138 Query: 426 HQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVIL 485 H P+SV+ +DLD FK INDR+GH AGD VL + + R D+ GR GGEEF + L Sbjct: 139 HSRPYSVLLMDLDKFKRINDRYGHHAGDLVLQAFTHAVQETQRKSDIFGRFGGEEFILFL 198 Query: 486 PGASLTEAAEVAERIRLKLNEKEMLI-AKSTTIRISASLGVSSSEETGDYDFEQLQSLAD 544 P S A VA+RI ++ + E+ + S ++++ S+G+S+S D D + + AD Sbjct: 199 PKCSEDNAQLVADRIMTRVRDMEIKVEGLSNPLKVTTSIGISTSRNQND-DLSSILTQAD 257 Query: 545 RRLYLAKQAGRNRVFASDN 563 + LY+AK AGR+R A DN Sbjct: 258 QALYIAKNAGRDRSHAYDN 276 >UniRef50_Q1K456 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K456_DESAC Length = 403 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/158 (39%), Positives = 95/158 (60%), Gaps = 1/158 (0%) Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D +T L +R A E+A+ L ++ + +Q PFS + +D+DHFK +ND +GH GD VL Sbjct: 237 DVVTGLQSRRAFMEEAKSLFQIAERYQRPFSFLIIDIDHFKKVNDTYGHLGGDVVLVELG 296 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRIS 520 ++SS LRA D+ GR+GGEEF VILP AE+ ER+ K+ E+ I T + ++ Sbjct: 297 KIMSSCLRATDILGRIGGEEFAVILPETGPDHTAELIERLLEKVRTTEIRIDDDTLVSVT 356 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 S+GV++ + ++ + AD+ LY AK GRNR Sbjct: 357 VSIGVATVPPLPIH-VGKVMAAADKALYQAKSDGRNRC 393 >UniRef50_B5JTF6 Signaling protein with membrane-bound sensor domain and ggdef domain n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTF6_9GAMM Length = 782 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 71/192 (36%), Positives = 115/192 (59%), Gaps = 1/192 (0%) Query: 368 LFTTML-LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTH 426 F T L L+++ ++ +VS + ++ ++ + D LT+++NR ++ + + Sbjct: 589 FFITFLSLLAFVLMGYVVSRWSLREAEVRQLSLVDPLTQIHNRLSIMQVLDQALSQHRRE 648 Query: 427 QHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILP 486 P +V+ +D+DHFKAIND +GH GDR+L+ AA +++++LR D GR GGEEF ++L Sbjct: 649 GSPIAVVMLDIDHFKAINDNWGHPVGDRILTSAASVLANNLREFDEIGRYGGEEFLLVLQ 708 Query: 487 GASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRR 546 G + A +AER R L ++L + +I +SAS GV++S+ D E L ADR Sbjct: 709 GTDVDGAVVMAERCRQSLATIQVLSDEGASIGVSASFGVAASQAQQPTDIEALIQRADRA 768 Query: 547 LYLAKQAGRNRV 558 LY AK+ GRNRV Sbjct: 769 LYRAKEKGRNRV 780 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 82/168 (48%), Gaps = 2/168 (1%) Query: 397 QAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVL 456 Q+ D LT ++NR +LF+ + P +V +DLDHFK IND +GH GD L Sbjct: 202 QSLTDALTGIHNRRSLFQILDRQVAHAHKQEEPLAVALLDLDHFKRINDEYGHPTGDAAL 261 Query: 457 SHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTT 516 AA ++ L D GR GGEEF +++P S ++ + E +R L E Sbjct: 262 KAAAAVLEKGLSEGDSVGRFGGEEFMLVMPNCSRSQCQQRCEALRKSLERVECYSENGEA 321 Query: 517 IRISASLGVS--SSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 I + S GV S + + + +AD LY AK AGRN+V D Sbjct: 322 IALRGSFGVVWYSGQSQRPLVSDGVVQVADAALYRAKNAGRNQVVLQD 369 >UniRef50_A1SY47 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY47_PSYIN Length = 794 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/165 (41%), Positives = 97/165 (58%), Gaps = 3/165 (1%) Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 LQ A+ D LT ++NR LFE + L + + Q P S++ +D+DHFK IND +GH GD Sbjct: 630 LQDVAFKDNLTSIFNRHYLFEISPMLLTVSEETQTPLSLLLIDVDHFKKINDTYGHLTGD 689 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 +L I + LRA D+ R GGEEF ++LP A+L E+ VAE++RL + E+ Sbjct: 690 NILKFIVKNIQAILRADDIFVRFGGEEFIILLPKANLEESVMVAEKLRLSV-EQNNYHKN 748 Query: 514 STTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 I I+ S+G S + T E+L S AD LY AK+ GRN+V Sbjct: 749 GMDISITVSIGASQYQHTE--TLEKLISRADLALYSAKEKGRNQV 791 >UniRef50_A4BRN6 Putative signal transduction protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BRN6_9GAMM Length = 504 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/179 (41%), Positives = 95/179 (53%), Gaps = 2/179 (1%) Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 R S + LQ A D LT YNR E + HQ P S+ +DLDHFK Sbjct: 322 RKASELERTAVQLQEMARRDPLTGAYNRRYFDEMLSQRFEAATRHQQPLSLGFLDLDHFK 381 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 +NDR+GHQAGD VL+ A ISS LR D R GGEEF ++LP +L A + ERIR Sbjct: 382 MVNDRYGHQAGDVVLAGVAKAISSRLRGDDFLARYGGEEFVLLLPNTNLELAQRILERIR 441 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETG--DYDFEQLQSLADRRLYLAKQAGRNRV 558 + +E +A IRI+ S G ++ + + L ADR LYLAK+ GRNRV Sbjct: 442 AHIETEEHTVAPEHMIRITLSAGAAAHMDGSRISNKLDDLIRAADRALYLAKRQGRNRV 500 >UniRef50_Q1D1X1 FHA/GGDEF domain protein n=2 Tax=Cystobacterineae RepID=Q1D1X1_MYXXD Length = 307 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 7/173 (4%) Query: 391 QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ 450 Q S+ A D LTR+YN+ E R C H+ P S++ D+DHFK IND +GH Sbjct: 133 QRSIYESATRDGLTRVYNKKYFLETVRKEFSYCLRHRVPLSLVLFDVDHFKKINDAYGHP 192 Query: 451 AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEML 510 AGD VL+ A +S ++R +D+ R GGEEF ++L ++ +A AER R +++ + + Sbjct: 193 AGDYVLTRIAQRVSDTVRTEDLLARYGGEEFALMLRESAEDQALACAERCRYAVDKADFV 252 Query: 511 IAKSTTIRISASLGVSSSEETGDYDFEQLQSL---ADRRLYLAKQAGRNRVFA 560 + T I+++ SLGV++ D DF Q + L AD+ LY AK+AGRNRV A Sbjct: 253 FS-GTPIKVTISLGVAT---LLDSDFSQPEDLIAAADKYLYRAKRAGRNRVDA 301 >UniRef50_B4SPL2 Diguanylate cyclase n=3 Tax=Stenotrophomonas RepID=B4SPL2_STRM5 Length = 471 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/167 (41%), Positives = 101/167 (60%), Gaps = 2/167 (1%) Query: 395 QWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDR 454 + A D LT L NR L R +L ++ PFS++ +DLDHFKAIND GH AGDR Sbjct: 292 ELDAGSDALTNLLNRRFLPTVLRREIELATRNRTPFSLLLLDLDHFKAINDGHGHDAGDR 351 Query: 455 VLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKS 514 L H AG++ R D R GGEEF V+L AS ++AA +AE +R ++ + + +A Sbjct: 352 ALQHVAGVLGQLTRGSDYLFRYGGEEFVVVLVAASESQAAVIAESLRRQIAKSPVPLANG 411 Query: 515 TTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + ++AS+GV+ + G D+E+L + AD +Y AK++GRNRV + Sbjct: 412 QVLSLTASIGVAGHD--GHPDYERLMARADAAMYEAKRSGRNRVVVA 456 >UniRef50_B8I5B8 Diguanylate cyclase n=4 Tax=Clostridium RepID=B8I5B8_CLOCE Length = 363 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 84/233 (36%), Positives = 123/233 (52%), Gaps = 15/233 (6%) Query: 342 VRVHTLSEGV-----RGDFGSISIALTLLWALFTTMLLISWYVIRRMV--SNMYVLQSSL 394 + + LS GV + DF SI L++ ++S+ V + M+ +NM L L Sbjct: 134 IYITVLSCGVYFYTFKNDF---SILLSISPYFILGTFIVSYTVYKYMIYLNNMRALFKKL 190 Query: 395 QWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDR 454 + ++ D LT L N + R + ++ H FS++ +D+D FK IND GHQAGD+ Sbjct: 191 KEESTKDYLTGLNNVREFDKLFRLVIDRAVSNNHKFSLLLIDIDFFKKINDTHGHQAGDK 250 Query: 455 VLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKS 514 VL ++ + RA D R GGEEF ++L AS ++A E+AERIR + E E I Sbjct: 251 VLKEIGKILRHNCRANDKISRNGGEEFSILLENASNSKAIEIAERIRRIIEENEFEITSG 310 Query: 515 TTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA----SDN 563 I ++ S+G+SS ET D Q+ AD LY AK++GRN V SDN Sbjct: 311 RKINVTVSIGISSYPETVS-DITQIIERADGALYKAKRSGRNLVVTDSVISDN 362 >UniRef50_C6NZM9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZM9_9PROT Length = 379 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 66/174 (37%), Positives = 98/174 (56%), Gaps = 4/174 (2%) Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 L+ D LT +YNR L + + A + ++ P S + +D+D FK IND FGH GD Sbjct: 186 LKLVGLTDPLTGIYNRRYLETRCQEEAAHVRRYRSPLSCMFLDIDKFKRINDSFGHNIGD 245 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 ++L I S LR+ DV R GGEEF V+LP + A ++AERIR + E+ I + Sbjct: 246 KILCSVTAQIKSQLRSNDVLARYGGEEFVVLLPQTGIRGACDIAERIRRTVAEQAFQIGR 305 Query: 514 STTIRISASLGVSSSEETGDYD----FEQLQSLADRRLYLAKQAGRNRVFASDN 563 ++++ S+GV+ + D D QL + AD LYLAK++GRN+V + N Sbjct: 306 EDELKVTISIGVAQAPVDADGDERTVAHQLLAAADEALYLAKESGRNKVVSDHN 359 >UniRef50_UPI0001AEBF6C diguanylate cyclase n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBF6C Length = 586 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/198 (38%), Positives = 114/198 (57%), Gaps = 12/198 (6%) Query: 362 LTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAK 421 +TLL + TT+L++ W +I R L ++L+ +A D+LT++ NR E A Sbjct: 379 ITLLAS--TTILVLMWAIINRK------LHAALREKAQTDSLTKVANRHYFTELASKALD 430 Query: 422 LCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEF 481 Q S + DLDHFK++ND +GH GD VL + R +DV GR+GGEEF Sbjct: 431 RMSEQQDVLSFVIFDLDHFKSVNDSYGHPTGDWVLKAVVNAVRKHCRKEDVFGRLGGEEF 490 Query: 482 CVILPGASLTEAAEVAERIRLKLNEKEMLIAKST-TIRISASLGVSSSEETGDYDFEQLQ 540 ++LPG + +A E+AE +R + +++ A+S T ISAS G+SS+ + Y FE L Sbjct: 491 GLLLPGCNEKKAKEIAECMRNSI--RQIDTAESGFTFDISASFGISST-ASSKYQFEALY 547 Query: 541 SLADRRLYLAKQAGRNRV 558 + AD LY +K+ GRNRV Sbjct: 548 ANADEALYGSKKHGRNRV 565 >UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Desulfovibrio vulgaris RepID=A1VA66_DESVV Length = 827 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/177 (41%), Positives = 105/177 (59%), Gaps = 4/177 (2%) Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKA-RPLAKLCQTHQHPFSVIQVDLDHF 440 R ++ L+++L +A D LT + NR F A R A+ + H +V+ +D+DHF Sbjct: 632 RDITERKNLEAALLREATTDPLTGVRNRRQFFVDANREFARALR-HDSGLAVLMLDIDHF 690 Query: 441 KAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERI 500 K +ND +GHQAGD VL A +LRA DV GR+GGEEF +LP AS EA E AER+ Sbjct: 691 KNVNDLYGHQAGDEVLRAFAACCVEALRAYDVFGRLGGEEFAALLPAASPEEAMETAERL 750 Query: 501 RLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 R ++ E+ ++ + T ++ + S+GV+S D F+ + ADR LY AK GRNR Sbjct: 751 RKRV-ERRSVVYEGTALQCTVSVGVTSL-AAADLGFDDMLRRADRALYAAKDHGRNR 805 >UniRef50_A8ZX32 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZX32_DESOH Length = 396 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/164 (42%), Positives = 94/164 (57%), Gaps = 6/164 (3%) Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHP---FSVIQVDLDHFKAINDRFGHQAGDRVLS 457 D LTRL NR E++ +L + P S I +D+DHFKAIND +GH AGD+VL Sbjct: 232 DGLTRLTNRRTFIERSE--KELSSGQRRPSSHISCIMIDIDHFKAINDTYGHAAGDKVLV 289 Query: 458 HAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTI 517 A +++ R D GR GGEEF ++LP +L A +VAER R + E +I I Sbjct: 290 KIATILTEKARPTDEVGRYGGEEFAMLLPATTLAGAVKVAERQRASIANAE-IIVDGNII 348 Query: 518 RISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 +++AS GV+S + +L AD LY AK+AGRNRV A+ Sbjct: 349 QVTASFGVASCPSDDIDNINELLKTADVALYEAKRAGRNRVVAA 392 >UniRef50_Q2BLJ7 Putative signal transduction protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLJ7_9GAMM Length = 478 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 108/200 (54%), Gaps = 13/200 (6%) Query: 361 ALTLLWALFTTMLL--ISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARP 418 AL LW + ++ +S Y VL L ++ D+LT LYNR +A Sbjct: 269 ALLDLWGMLASLTFGALSAYTC--------VLMRRLYQRSVTDSLTGLYNRQHFKFRAEQ 320 Query: 419 LAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGG 478 A + P +++ +D+D FK IND+FGHQ GD VL A+ I +LR D+ GR GG Sbjct: 321 EASRAVRYNQPLTMLMIDIDQFKQINDKFGHQTGDTVLQQASQYIRDNLRESDLLGRYGG 380 Query: 479 EEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQ 538 EEF V+LP + L +A + A+RIR L++ + +I +S L S + + +++ Sbjct: 381 EEFIVLLPQSDLEQATQCADRIRDSLDKSIFIYGSLVSISVSVGLAQQSPDT---FVYDE 437 Query: 539 LQSLADRRLYLAKQAGRNRV 558 L S AD+ LY AK+ GRNR+ Sbjct: 438 LVSQADQALYTAKRNGRNRI 457 >UniRef50_Q2BLU7 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLU7_9GAMM Length = 477 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 120/199 (60%), Gaps = 8/199 (4%) Query: 359 SIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARP 418 S+ +T + + T+++++ ++ R++ + Q+ L+ AW D LT L NR A ++ Sbjct: 283 SLIVTAIVCILVTLIVLA--LLLRVIRHY---QAELEGIAWRDPLTSLLNRRAFIDRYAA 337 Query: 419 LAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGG 478 + Q + P S++ VD+DHFK INDR+GH AGD VL + +++ ++R D+ R GG Sbjct: 338 IRNQHQRNGQPLSLLLVDIDHFKEINDRYGHNAGDLVLKGISEILTEAVRPSDLVTRWGG 397 Query: 479 EEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQ 538 +EF ++L G A ++AERIR +++ + L A S R++ S+GV +E+ D+D ++ Sbjct: 398 DEFLLLLSGTDSDNARDIAERIRTRISLEPDLAAISEQ-RLTVSIGV--AEQRDDFDLDR 454 Query: 539 LQSLADRRLYLAKQAGRNR 557 AD LY AK+AGR+R Sbjct: 455 HVQEADSGLYRAKKAGRDR 473 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 67/170 (39%), Positives = 100/170 (58%), Gaps = 1/170 (0%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L+ L+ QA D LT + NR E+A + + P S +D+D FK +ND +GH Sbjct: 419 LEEELKRQARIDFLTGVSNRRYFMEQAEQEIQRTSRYDTPLSFFMLDIDLFKQVNDTYGH 478 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 ++GD VL A + +LR D+ GRVGGEEF ++LP +AAEVAER+R L ++++ Sbjct: 479 KSGDIVLKRMASVCRETLREIDIIGRVGGEEFAILLPETDKAQAAEVAERLRSVLADEKV 538 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 I+ + S+GV+S + D + + L +LAD LY AK+ GRNRV+ Sbjct: 539 PTEAGAPIQFTVSIGVASRVSSQD-NIDMLLNLADEALYQAKKYGRNRVY 587 >UniRef50_B9L9B5 Sensory box/ggdef domain protein n=1 Tax=Nautilia profundicola AmH RepID=B9L9B5_NAUPA Length = 346 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 113/200 (56%), Gaps = 16/200 (8%) Query: 362 LTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAK 421 +TL+ A+ +L I ++V ++++ L+ + D LT+LYNR E Sbjct: 162 ITLITAIL--ILFIIFFV-------YFMIKKGLEKEKIIDPLTKLYNRRHFIENFNYFID 212 Query: 422 LCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEF 481 L + ++ PFS+I +D+D+FK IND +GHQ GD +L + + I LR D+A R GGEE Sbjct: 213 LYERYKRPFSIIFLDIDNFKKINDTYGHQKGDEILINLSKHIMQMLRNTDLAFRYGGEEI 272 Query: 482 CVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQS 541 +ILP L EA ++AER+R + EK + +K T+ S+GV + + G + F + Sbjct: 273 VIILPETELYEAFQIAERLRQSIKEKIQIKSKPVTV----SMGVGTYKGEGMFSFIE--- 325 Query: 542 LADRRLYLAKQAGRNRVFAS 561 D +Y AK+AG+++V S Sbjct: 326 RVDEAVYRAKRAGKDKVIIS 345 >UniRef50_Q02P32 Putative two-component response regulator n=6 Tax=Pseudomonas aeruginosa RepID=Q02P32_PSEAB Length = 525 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 68/175 (38%), Positives = 96/175 (54%), Gaps = 1/175 (0%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 +S ++ L+ A DTLT L+NR + +A + K + +HP + +D+DHFK I Sbjct: 347 ISRRKAMEQELRLLASTDTLTGLHNRHSFLHQAELMLKAAERFRHPCVALMLDIDHFKNI 406 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND GH GDR L A + LR D+ GR+GGEEF +LP SL +A +VAER+R Sbjct: 407 NDSHGHLTGDRALQRVAETLRQGLREVDLLGRLGGEEFAALLPEVSLDQALDVAERLRAG 466 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + + +R++ S+GV+ + GD D E L AD LY AK GRNR Sbjct: 467 VEALRVSNPDGEPLRMTVSIGVALRRDAGD-DLESLLVRADSALYQAKSGGRNRT 520 >UniRef50_Q489Q4 Sensory box/GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q489Q4_COLP3 Length = 451 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 72/178 (40%), Positives = 100/178 (56%), Gaps = 7/178 (3%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 V+ ++ L+ + A D LT LYNR E+A + + + ++I +D+DHFK+I Sbjct: 275 VTELFKLKEEFKLLANTDPLTNLYNRRFFIEQAEKEYQRAKRYSLSMTLISIDIDHFKSI 334 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND+FGH AGD+VL A + +SLR D+ R+GGEEF ++LP S A AERI+ Sbjct: 335 NDQFGHPAGDQVLIEIAKQLKASLRQTDILARIGGEEFSILLPETSAMSAMTFAERIK-- 392 Query: 504 LNEKEMLIAKST---TIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 E+ LI I +S S+GVSS D F+ L S AD+ LY AK GRN V Sbjct: 393 -EEQSRLIITGDWQGEINLSVSIGVSSL-IASDKAFDVLFSRADKALYQAKNTGRNTV 448 >UniRef50_C9YC42 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YC42_9BURK Length = 409 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 123/217 (56%), Gaps = 7/217 (3%) Query: 343 RVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDT 402 R++ L+ V G S+ L+W FTT + + + + + + + + Q L+ D Sbjct: 200 RINGLAVCVIGFCLSV-----LMWRKFTT-IAVQKHQLEKAHTELQLKQRELERLTRQDG 253 Query: 403 LTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGL 462 LT L+NR E + K + +++ +DLDHFK IND +GH AGD VL H A Sbjct: 254 LTGLFNRNTFVELSTNELKRAKRQGSATTILLLDLDHFKRINDTWGHPAGDVVLRHVAQT 313 Query: 463 ISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISAS 522 + +S+R+ D+ GR+GGEEF V+LP + + ++AE+IR +L ++ + I ++AS Sbjct: 314 MVNSVRSTDLVGRLGGEEFIVLLPHTTAEASRKIAEKIRQRLEVSDIRW-EGKRIAVTAS 372 Query: 523 LGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 +G+S + +F+ L + AD+ LYLAKQ GRNRV Sbjct: 373 IGLSGTTAEESREFDSLYTEADKALYLAKQRGRNRVI 409 >UniRef50_D2L986 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L986_9DELT Length = 530 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 68/165 (41%), Positives = 96/165 (58%), Gaps = 4/165 (2%) Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D LT LYNR LF L P + + +DLDHFKAIND GH+ GD+VL+H A Sbjct: 365 DALTGLYNRRFLFSGGAKLLDASARAGRPCTCLMLDLDHFKAINDSHGHRTGDQVLAHVA 424 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRIS 520 G I+ ++R D+ R GGEEF V+L G+ AE+AERIR L + + + + ++ Sbjct: 425 GRIAGAVRRSDLVARYGGEEFAVLLTGSDRQHGAELAERIRQALADAPCQVGDA-YLPVT 483 Query: 521 ASLGVSSSEET---GDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 S+GV+ + E G+ + L + AD+ LY AK AGR+RV A + Sbjct: 484 VSIGVAETRERVQFGESALDDLLARADKALYAAKAAGRDRVAAEE 528 >UniRef50_Q0EXC8 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXC8_9PROT Length = 615 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 73/186 (39%), Positives = 105/186 (56%), Gaps = 2/186 (1%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 I R +++ L+ L+ QA D LT L NR FE A + H + FS++ +D+DH Sbjct: 431 IDRDITDRKELERELESQARTDVLTGLNNRRYFFELAELELARAKRHGNQFSLLMLDVDH 490 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK ND +GH GDRVL + + +LR D++GR+GGEEF ++LP A EVAER Sbjct: 491 FKLFNDSYGHHIGDRVLQKLSEVCMHTLREIDLSGRIGGEEFAIMLPETRGDRAMEVAER 550 Query: 500 IRLKLNEKEMLIA-KSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +RL + +L+ +ST + + S+GV+S G + L AD LY AK AGRN+V Sbjct: 551 LRLAIAGAPVLLEQQSTFVHFTVSIGVTSLVAAG-RQVDDLLKRADDALYAAKNAGRNQV 609 Query: 559 FASDNA 564 D + Sbjct: 610 CKKDES 615 >UniRef50_A8IN97 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IN97_AZOC5 Length = 366 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 85/231 (36%), Positives = 122/231 (52%), Gaps = 27/231 (11%) Query: 355 FG--SISIALTLLWAL-FTTMLLISWYVIRR------MVSNMY---------------VL 390 FG S++ AL ++WA T L +S + + M S M+ Sbjct: 138 FGWFSVACALVMVWAAAMTGALAVSLFAMSTYCFCIVMTSAMFHAYNRHAELALHNIEAA 197 Query: 391 QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ 450 ++L+ HDTLT L N AL + A LA P ++ +D+DHFKAINDRFGH Sbjct: 198 NAALRDATRHDTLTGLLNLPALRDAAAGLAGG-HGESAPLALAFIDVDHFKAINDRFGHA 256 Query: 451 AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEML 510 AGD VL A IS + R QD+ R+GGEEF +I+PG L A A+++RL + E+ + Sbjct: 257 AGDSVLQTVAHAISGAARPQDLVARIGGEEFAIIMPGQDLAHATAAADKVRLAVAERPVT 316 Query: 511 IAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + K T+R++ S+GV++ + LQ AD +Y AK GRNRV A+ Sbjct: 317 VGKE-TLRVTISVGVTACQPPHQALDWMLQR-ADMAMYAAKADGRNRVRAT 365 >UniRef50_C5SB80 Diguanylate cyclase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SB80_CHRVI Length = 317 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 73/164 (44%), Positives = 95/164 (57%), Gaps = 5/164 (3%) Query: 398 AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLS 457 A D LT+L NR E+ + QT HP SV+ +DLDHFK +ND FGH AGDRVL Sbjct: 158 ARTDALTQLPNRRYFMERLNHGVRQAQTRSHPLSVLMMDLDHFKRVNDTFGHAAGDRVLV 217 Query: 458 HAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTI 517 A L+ + +R D+ GR+GGEEF + + A L A VAER+R +N ++ T Sbjct: 218 AFAELMRAQVRLSDLPGRLGGEEFGLYMFDAELEVAVSVAERLRAHVN---LMRPLDTDY 274 Query: 518 RISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 R S S+GV++ D EQL AD LY AK+ GRNRV A+ Sbjct: 275 RPSVSIGVAALAPG--EDTEQLLKRADDGLYRAKETGRNRVIAA 316 >UniRef50_Q30U30 Diguanylate cyclase (GGDEF domain) n=2 Tax=Campylobacterales RepID=Q30U30_SULDN Length = 539 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 70/175 (40%), Positives = 103/175 (58%), Gaps = 6/175 (3%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 ++N YV L+ A D LT+L+NR L + L +T P SVI +D+D+FKA+ Sbjct: 368 ITNEYVKIKELEHMASTDALTKLFNRTKLNDVLEKEMALSRTVPSPLSVIFLDIDYFKAV 427 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND +GH AGDRVL + A +I+SS+RA D+A R GGEEF +IL ++EA+ + E++R + Sbjct: 428 NDTYGHDAGDRVLINIANIITSSIRAGDIAARWGGEEFMIILQATPVSEASVLGEKLRAR 487 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + E + T +I+ SLGV +E E D LY AK+ GRN++ Sbjct: 488 V-EGHLF---ETVGKITISLGV--TEYINAESEESFIKRVDEALYEAKERGRNKI 536 >UniRef50_A4YPK6 Putative diguanylate cyclase (GGDEF) with GAF and HAMP domains n=2 Tax=Bradyrhizobium RepID=A4YPK6_BRASO Length = 648 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 71/175 (40%), Positives = 97/175 (55%), Gaps = 2/175 (1%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 ++NM L+ L+ Q+ D LT L NR L E AR H+ P SV+ +D+DHFK Sbjct: 428 IANMK-LREGLRDQSVRDVLTGLNNRRYLLETARRELLRAARHKSPVSVVTLDVDHFKTF 486 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND GH AGD VL H ++ ++ V R GGEEF V+LPGA+ E AE +R + Sbjct: 487 NDNHGHDAGDTVLRHVGEILRATFADDGVPCRFGGEEFVVLLPGATTEEGGVRAEELRAR 546 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + ++ A S R++ S GV+S + G F + +AD LY AKQ GRNRV Sbjct: 547 IESMKIRYADSYLPRVTISAGVASYPDAGG-SFMDILRVADDALYQAKQKGRNRV 600 >UniRef50_Q60BH3 GGDEF domain protein n=1 Tax=Methylococcus capsulatus RepID=Q60BH3_METCA Length = 385 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 71/169 (42%), Positives = 95/169 (56%), Gaps = 2/169 (1%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L + L A D+LTR+YNR A +T + P S++ +D+DHFK +NDR GH Sbjct: 216 LNAELHQLASFDSLTRIYNRRVFENLATDELLRARTKRVPVSLLMIDIDHFKQVNDRHGH 275 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 AGD L A + SLR +D+ R GGEEF V+LP + +A +AER+RL Sbjct: 276 AAGDAALVRVAETMEESLRHRDLLCRYGGEEFGVLLPATARAQALRIAERLRLATMHAGF 335 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 L I ++ S+GV+ E YD L+ ADR LY+AKQAGRNRV Sbjct: 336 LYGGE-AIPLTVSIGVACIEGP-PYDLSLLKHDADRALYVAKQAGRNRV 382 >UniRef50_C0QTH1 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QTH1_PERMH Length = 683 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 75/221 (33%), Positives = 115/221 (52%), Gaps = 14/221 (6%) Query: 348 SEGVRGDFGSISIA--------LTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAW 399 S G+ G G I + + +L ++ + M L++ R +S + L++ A Sbjct: 214 SPGIGGTLGLIVLPEERLSRKDINILNSILSIMTLVTGS--SRALSKAI---TELEYFAG 268 Query: 400 HDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHA 459 HD LT LYNR + + + + FS+I +DLD+FK IND +GH GD VL Sbjct: 269 HDPLTDLYNRRIFEDLLKYEVSRAKRKNYKFSLILIDLDNFKYINDTYGHHIGDIVLKSV 328 Query: 460 AGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRI 519 A ++ +S+R D+ R+GG+EF ++L L +A VAERIR L ++ I + I + Sbjct: 329 ADILEASIRDGDLVARIGGDEFVILLSETELEKALIVAERIRKNLENNKLCIFEGAVISV 388 Query: 520 SASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 SASLGV G E+L + D LY AK G+N+V+ Sbjct: 389 SASLGVVEFPTHGTTK-EELMMVVDNALYRAKDLGKNKVYV 428 >UniRef50_C7LC06 GGDEF domain protein n=28 Tax=Brucella RepID=C7LC06_BRUMC Length = 264 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 76/208 (36%), Positives = 114/208 (54%), Gaps = 11/208 (5%) Query: 356 GSISIALTLLWAL-----FTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRG 410 G ++I+L+L + L F+ + + + ++ + + LQ +A D +T L NR Sbjct: 35 GLMAISLSLGFPLVMIFPFSAFIFLRYDKLKEAYAQLEKSHVELQARARIDHMTGLLNRE 94 Query: 411 ALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQ 470 ALFE K+ ++ +++ +D DHFKAIND FGH GDR L A + + R Sbjct: 95 ALFEAM----KISRSRIETGTLLVIDADHFKAINDSFGHGVGDRALKLIAFALQNVTRKG 150 Query: 471 DVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEE 530 D+ GR+GGEEFCV LPGAS VA+RIR ++ + ++ S+GV+S+ + Sbjct: 151 DLVGRIGGEEFCVFLPGASGETGVRVAQRIRAEVENTPFHTTEYQVYPLTISIGVASAPK 210 Query: 531 TGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + Q+ S ADR LYLAKQ GRN V Sbjct: 211 SETNS--QVLSRADRCLYLAKQRGRNCV 236 >UniRef50_Q0AV70 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AV70_SYNWW Length = 459 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 71/171 (41%), Positives = 98/171 (57%), Gaps = 10/171 (5%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L LQ QA D+LT LYN + EK + +Q +++ +D+DHFK+IND FGH Sbjct: 295 LNRILQVQAITDSLTGLYNHRQVLEKLQLEIARANRYQQELTIMMLDIDHFKSINDEFGH 354 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 Q GD VL A +I +LR D+AGR GGEEF +ILP +L +V ERIR ++ E+ Sbjct: 355 QVGDVVLVEVAQIIKRNLRNIDIAGRYGGEEFLIILPQTNLNNGRQVGERIRRQV---EI 411 Query: 510 LIAKSTTIRISASLGVS--SSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + + I+ S+G+S EE DY AD+ LY AK+ GRNR+ Sbjct: 412 EGFEDSKEGITVSIGISQHQGEEMVDY-----IERADQLLYRAKRKGRNRI 457 >UniRef50_D0IXN6 Diguanylate cyclase n=2 Tax=Comamonas testosteroni RepID=D0IXN6_COMTE Length = 473 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/166 (40%), Positives = 95/166 (57%), Gaps = 14/166 (8%) Query: 400 HDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHA 459 HD LT + RGA ++ + + + C+ PF+++ +DLDHFK IND FGH GD++L Sbjct: 310 HDFLTDMLARGAFMKQGQRILERCRQDGQPFAILMLDLDHFKQINDSFGHAGGDQLLRSF 369 Query: 460 AGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERI-------RLKLNEKEMLIA 512 + +S LRAQD+ GR+GGEEF V LP + A E+A+RI R+ +N+K M Sbjct: 370 SQTLSQVLRAQDIVGRMGGEEFAVALPKVDASAAQEIAKRINRAIRELRVPMNDKTM--- 426 Query: 513 KSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 S T+ I V ++ + L AD+ LY AK AGRNRV Sbjct: 427 -SATVSIGL---VHTTSLQAHQSLDMLLLQADQALYEAKAAGRNRV 468 >UniRef50_Q1JWQ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWQ3_DESAC Length = 648 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/175 (38%), Positives = 99/175 (56%), Gaps = 2/175 (1%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 ++ M +LQ L+ A D LT NR LF +L + ++ SVI DLDHFKA+ Sbjct: 473 ITTMVLLQQKLERLATTDELTGAVNRRQLFIYTDQFCQLAKRYKKALSVIFYDLDHFKAV 532 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND +GH AGD VL I S LR D+ R GGEEFC+++P A AERIR + Sbjct: 533 NDTYGHAAGDEVLRQITTRIQSMLRDTDILARYGGEEFCILVPETDGDHAYLFAERIRQR 592 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 ++E + ++ +++++ S+GV++ +E D L AD+ +Y AK+ GRN V Sbjct: 593 ISESSVNLSSGESLQVTVSMGVATYQE--DEQGSSLIDRADQGVYEAKRRGRNCV 645 >UniRef50_A8FBD0 ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Bacillus pumilus RepID=A8FBD0_BACP2 Length = 361 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/194 (35%), Positives = 109/194 (56%), Gaps = 3/194 (1%) Query: 366 WALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQT 425 W +L ++YVI + Y L + ++QA +D LT + N+ E + Sbjct: 161 WMFSYIAVLFNFYVIEHQ-TKAYQLLNLYKFQAHYDFLTGVLNKRKFDEVLNDAFSMKFK 219 Query: 426 H-QHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVI 484 H H S+I +D+D+FK+IND++GH GD VL + + R+ D GR+GGEEF V Sbjct: 220 HPTHQMSLIYLDIDYFKSINDQYGHHEGDMVLKEIGKRLIKNTRSSDYIGRIGGEEFAVF 279 Query: 485 LPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLAD 544 LP ++ + ++AER+R K+ ++ + + +I I+ SLG + T D +QL +AD Sbjct: 280 LPNCTVEKTWQIAERLRRKIADQPVYLQNGMSIHITVSLGCAYYSGTSP-DIKQLPIIAD 338 Query: 545 RRLYLAKQAGRNRV 558 + LY AKQ+GRN+V Sbjct: 339 QELYKAKQSGRNQV 352 >UniRef50_Q0AG61 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Nitrosomonadaceae RepID=Q0AG61_NITEC Length = 984 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/176 (39%), Positives = 104/176 (59%), Gaps = 4/176 (2%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 ++ L W A HD LT LYNR E+ + + +QHP +++ DLD FK +ND GH Sbjct: 550 VEGHLAWLADHDPLTNLYNRRRFSEELEQILSWAERYQHPGALLFFDLDRFKFVNDTSGH 609 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 QAGD +L A ++S ++R D+A R+GG+EF VILP A EVA++I +L E ++ Sbjct: 610 QAGDAMLKMVADMLSRTVRTADIAARLGGDEFAVILPEIMPGAAIEVAKKILARLGETQL 669 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRN--RVFASDN 563 + T ISAS+G++ E G+ + L + AD +Y AK+ GR +F+SD+ Sbjct: 670 SL-NGRTHNISASIGIAIFPEHGN-NVHDLLAAADLAMYQAKETGRGTWHLFSSDD 723 >UniRef50_C9R9C2 Diguanylate cyclase n=1 Tax=Ammonifex degensii KC4 RepID=C9R9C2_AMMDK Length = 267 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/193 (37%), Positives = 103/193 (53%), Gaps = 13/193 (6%) Query: 375 ISWYVIRR---------MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQT 425 + W I R +V + ++LQ L+ + D LT LYNR AL+ + K Q Sbjct: 69 VQWIYIERATEFLTQILVVIDAFLLQ--LKDRVERDPLTGLYNRLALYPILSQMLKKSQE 126 Query: 426 HQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVIL 485 + P V +DLD+FK +ND +GH AGD VL AAG+I +LR+ D R GGEEF ++L Sbjct: 127 EESPLVVAMLDLDNFKTVNDEYGHHAGDEVLRAAAGIIKKNLRSGDKVFRYGGEEFLIVL 186 Query: 486 PGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADR 545 P SL +A ERIR ++ L T I+AS+G + G + L AD+ Sbjct: 187 PNTSLDKAVVALERIRGQIAAN--LFIPGTETSITASIGAAGYTGKGSVSPDDLILQADK 244 Query: 546 RLYLAKQAGRNRV 558 LY AK+ G+N+V Sbjct: 245 ALYRAKREGKNKV 257 >UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDS7_9PROT Length = 750 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/175 (37%), Positives = 96/175 (54%), Gaps = 7/175 (4%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 +S + L L+ A++D LT +YNR + + + ++ P S+I +D+D+FK I Sbjct: 580 LSKIKKLSKQLETMAFYDKLTNIYNRAKFKNILKEFIEYSKRYKTPLSLIFLDIDYFKKI 639 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND FGH+ GD VL + SLR DV GR GGEEF ++LP + A VAE+IR Sbjct: 640 NDNFGHEKGDLVLKEMVKVAKLSLRESDVFGRWGGEEFLILLPNTDINGAKIVAEKIRDA 699 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + + I+++ SLGV+ +E D E + AD LY AK+ GRNRV Sbjct: 700 IESHDF-----DGIKVTVSLGVTQLKE--DDTIESFVNRADIALYQAKKEGRNRV 747 >UniRef50_A0Y806 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y806_9GAMM Length = 562 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 84/237 (35%), Positives = 124/237 (52%), Gaps = 14/237 (5%) Query: 332 ERLDHFDGVLVRVHT-LSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNM--- 387 + LD+ DG++ T LS VR +I LT + L L++ + RR+ S + Sbjct: 323 DNLDNLDGLIFESDTGLSSEVRS---AIVFILTFVIVLLAVSGLLAIFN-RRLQSEIRER 378 Query: 388 YVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRF 447 +++ L+ A+ D LT L NR + Q + FSVI +DLD FK +ND++ Sbjct: 379 KLVEEKLETLAYTDPLTNLLNRRGFSTRYADELMRAQRYGDVFSVILIDLDLFKKVNDQY 438 Query: 448 GHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEK 507 GH++GDRVL A L+ R D GR GGEEF ++LP SL EA A R+ + + Sbjct: 439 GHESGDRVLVSVADLLLKDTRETDFCGRFGGEEFILLLPNTSLVEATVYARRLCQHIGDN 498 Query: 508 EMLIAKSTTIRISASLGVSS--SEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + + + I+AS GV+ SE+ G+ + AD+ LY AK GRN+V ASD Sbjct: 499 NVRLQNGRLVTITASAGVTEWLSEDKGEATIRR----ADQALYHAKNNGRNQVVASD 551 >UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47C76_DECAR Length = 548 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/172 (38%), Positives = 99/172 (57%), Gaps = 1/172 (0%) Query: 391 QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ 450 Q L+ + D LT L+NR F A+ ++ SV+ +D+DHFK IND GH+ Sbjct: 373 QKELERLSQFDELTNLFNRRHFFSLAKHELNRSSRYRSKLSVMMLDIDHFKRINDGHGHK 432 Query: 451 AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEML 510 GD VL++ I SLR D+AGR+GGEEF ++LP L +A+ +AER+R ++ E + Sbjct: 433 TGDLVLANIGKQIGDSLRDSDIAGRMGGEEFAILLPETDLEQASIMAERLRKQVAETWLD 492 Query: 511 IAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 I T+ + S+G+++ + D E L AD LY AK +GRN+V +D Sbjct: 493 IGDGRTLNCTLSIGLATKSDQ-QIDLENLLHQADTALYAAKNSGRNKVSCAD 543 >UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRD6_THISH Length = 464 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/158 (44%), Positives = 91/158 (57%), Gaps = 2/158 (1%) Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D LT + NR L E+A + H P S++ +DLDHFK IND +GH AGD VL A Sbjct: 306 DALTGVANRRQLVERADMEVPRSERHGAPLSLLCLDLDHFKRINDDYGHLAGDEVLKQVA 365 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRIS 520 I SLR D+ RVGGEEF V+LP L A +VAERIR+KL ++ + + + ++ Sbjct: 366 EAIQQSLRPSDLLARVGGEEFHVLLPDTDLAGARDVAERIRVKLEGLDIPV-QGVVLHVT 424 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 S+G + G D + L AD RLY AK GRNRV Sbjct: 425 VSVGCAQLGPDGA-DMKSLTHTADERLYQAKALGRNRV 461 >UniRef50_C4V482 Possible diguanylate cyclase n=2 Tax=Selenomonas RepID=C4V482_9FIRM Length = 620 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 101/189 (53%), Gaps = 5/189 (2%) Query: 372 MLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFS 431 ML + IR ++ L A DTLT L NR + + L Q + P S Sbjct: 427 MLAFMSHFIRVSEEELHTANQQLTQLAIRDTLTNLLNRREMERLLKEAVALSQAQKTPLS 486 Query: 432 VIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLT 491 VI +D+DHFKA+ND +GH GD+VL + IS ++R D R GG+EF +IL GA L Sbjct: 487 VILMDIDHFKAVNDNYGHDMGDKVLLTVSDAISRTIRGSDAGCRWGGDEFFIILQGAPLA 546 Query: 492 EAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAK 551 A V ERIR ++ E +M + TI S+G ++ + D + QL AD LY AK Sbjct: 547 VAGRVGERIRRRVEEAKMPFHHNVTI----SVGAAAFDPEQDNEL-QLFKNADEALYQAK 601 Query: 552 QAGRNRVFA 560 +AGRN V+A Sbjct: 602 KAGRNVVYA 610 >UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6I3_LARHH Length = 350 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/167 (40%), Positives = 94/167 (56%), Gaps = 1/167 (0%) Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 L+W D LT LYNR ++ + A+ + H P + + +D DHFK IND +GHQAGD Sbjct: 176 LKWLGLTDPLTGLYNRRYFEQRLQEEAQRTRRHGDPLACLMLDADHFKRINDTWGHQAGD 235 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 VL A + LR DVA R+GGEEF V+LP + VAERIRL + + + ++ Sbjct: 236 VVLKVLARRVRQQLRGCDVAARIGGEEFAVLLPSTPVRHVQLVAERIRLAIAGEPVHVSP 295 Query: 514 STTIRISASLGVSS-SEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 +++S SLG + + D E+L + AD LY AK+ GRNR Sbjct: 296 DCVLQVSVSLGAAMLAPGAADISPERLMARADAALYQAKRNGRNRTM 342 >UniRef50_B7RWX6 GGDEF domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWX6_9GAMM Length = 390 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 110/209 (52%), Gaps = 16/209 (7%) Query: 355 FGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFE 414 FG+ S A L+ F +LI + Q L A D LTRL NR L + Sbjct: 186 FGAHSWAYVLVAVGFLASVLIEY-------------QQHLSHLATEDPLTRLLNRRGLQD 232 Query: 415 KARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAG 474 R + H P S I +D+D+FK +ND FGH+ GD V+ A +I R DV Sbjct: 233 ALRISIAHARRHGLPTSAIMIDIDYFKRVNDSFGHETGDHVIQLVASMIERLCRESDVVA 292 Query: 475 RVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDY 534 R GGEEF +IL A +AER+R + E+ L+ I ++ SLGV+S+ +G++ Sbjct: 293 RTGGEEFLIILANTDSASARILAERVRQAVGERP-LVVDQHRIPVTISLGVASA--SGEF 349 Query: 535 DFEQLQSLADRRLYLAKQAGRNRVFASDN 563 + ++L AD+ +YLAK+ GRNRV + +N Sbjct: 350 NLDELSQEADQAMYLAKRGGRNRVASVEN 378 >UniRef50_Q1YM41 Conserved hypothetical membrane protein with GGDEF domain n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YM41_MOBAS Length = 390 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/193 (40%), Positives = 105/193 (54%), Gaps = 15/193 (7%) Query: 373 LLISWYVIRRMVSNMYVLQSS-------LQWQAWHDTLTRLYNRGALFEKARPLAKLCQT 425 LLI+ VI S +VL + L+ A HD LT L NR A ++ L K Q Sbjct: 200 LLIA--VIHTTASGAFVLSVAYERMARDLRHAAMHDALTGLPNRRAFEQR---LEKALQD 254 Query: 426 HQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVIL 485 H F+++ DLDHFK+INDR+GH AGD L A L S LR QD RVGGEEF IL Sbjct: 255 RGH-FALVVFDLDHFKSINDRYGHAAGDEALRRCALLCPSVLRQQDFVARVGGEEFAAIL 313 Query: 486 PGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADR 545 PG + TEA + + +R + + A + ++ S G++ S E G+ F++L AD Sbjct: 314 PGVTPTEAFMLTDGVRSTVAATR-IAADDVSFGLTLSAGIAHSAE-GEASFDRLMRAADA 371 Query: 546 RLYLAKQAGRNRV 558 LY AK GRNR+ Sbjct: 372 NLYRAKNGGRNRI 384 >UniRef50_C1DD63 Sensor protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD63_LARHH Length = 379 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/169 (39%), Positives = 95/169 (56%), Gaps = 3/169 (1%) Query: 391 QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ 450 ++ L+ +A +D LT+L NRGA+ E L++ C P +VI D+DHFK +ND GHQ Sbjct: 211 KNQLEVRATYDPLTQLLNRGAILEG---LSQSCCDPSQPLAVILADIDHFKNVNDVHGHQ 267 Query: 451 AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEML 510 AGD L A + LR D GR GGEEF ++LPGA+ A VAER+R + + + Sbjct: 268 AGDMALEAVARRLGRVLRGGDAVGRYGGEEFLIVLPGATPDVAMIVAERLRQAVAGEPVD 327 Query: 511 IAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 + + ++ SLGV +D L + AD+ LY AK GRN+V Sbjct: 328 LGGGRSQSLTLSLGVCCQPGGQAHDVACLIAEADQALYAAKAGGRNQVM 376 >UniRef50_A0Q289 GGDEF domain protein, putative n=2 Tax=Clostridium RepID=A0Q289_CLONN Length = 1804 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 63/157 (40%), Positives = 93/157 (59%), Gaps = 4/157 (2%) Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D LT Y R L +K + + FS+I DLDHFK +ND FGHQ GD+VL++ Sbjct: 1471 DKLTGAYTRKYLEDKLSESIECANFNNDKFSIIMFDLDHFKNVNDTFGHQVGDKVLNNVC 1530 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRIS 520 G++ +LR D+ GR GGEEF ILPG ++A +AERIR + + ++L K ++ Sbjct: 1531 GIVMKNLRDGDICGRYGGEEFISILPGIGESKALNIAERIRSAVEDSKILGEKHP---VT 1587 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 S+G+S+ + E ++ AD+ LY+AK +GRNR Sbjct: 1588 ISIGISTYPQQAQLKRELIEK-ADQALYIAKDSGRNR 1623 >UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6I5_BREBN Length = 530 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 76/183 (41%), Positives = 102/183 (55%), Gaps = 9/183 (4%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 IR ++N+ L A D LT L NR L E + Q PFS++ +DLD Sbjct: 355 IRFALTNIKKKTEQLTHDARTDPLTGLTNRRTLEETMQK----WMAEQIPFSIMMMDLDR 410 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FKAIND +GHQAGD VL H A +ISSSLR +DV+ R GGEEF V++ L EA +VAER Sbjct: 411 FKAINDTYGHQAGDEVLRHFAKIISSSLRPEDVSCRFGGEEFVVLVSHTGLEEAYQVAER 470 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 IR L + I + R++ S G++ E L +AD +Y AK+AGRN+ Sbjct: 471 IRRALETRTNPIGQ----RLTVSQGIAHYPSHA-VSPEGLLHVADEAMYKAKRAGRNQTM 525 Query: 560 ASD 562 ++ Sbjct: 526 IAE 528 >UniRef50_A4CAZ6 GGDEF domain protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CAZ6_9GAMM Length = 293 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/160 (42%), Positives = 93/160 (58%), Gaps = 8/160 (5%) Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D+LT L+ R E A+ L + PFS++ +DLD FK +ND+FGH GD+VL A Sbjct: 132 DSLTGLFLRRYFLELAQNEFDLYARKKQPFSILMLDLDFFKRVNDQFGHACGDKVLICFA 191 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRIS 520 L+ SLR DV R GGEEF V+LP L EA E+A+ I + K+M ++ TI I+ Sbjct: 192 QLMKESLRKTDVVARWGGEEFIVLLPNTRLKEAVEIAKLINMHTRNKKM-ACETNTITIT 250 Query: 521 ASLGVSSSEETGDYDFEQLQSL---ADRRLYLAKQAGRNR 557 S+GV + +FE LQ++ AD LY AK GR+R Sbjct: 251 VSIGVIEMHD----EFEHLQTMITQADELLYQAKNNGRDR 286 >UniRef50_A6LN72 Diguanylate cyclase n=2 Tax=Thermosipho RepID=A6LN72_THEM4 Length = 1339 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 95/168 (56%), Gaps = 6/168 (3%) Query: 392 SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQA 451 S L+ +++ D LT+LY R EK + + + S+I DLDHFK IND++GH Sbjct: 1171 SLLRLRSFLDPLTKLYTRYYFAEKIDEYFEKAKKFKERLSIIMCDLDHFKKINDKYGHLL 1230 Query: 452 GDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEML 510 GD VL A ++ ++ R D+ GR GGEEF ++LP +SL A E+AER+R K+ + Sbjct: 1231 GDEVLREIAKILKENVRRNNDIVGRYGGEEFIILLPNSSLNYAKEIAERLRKKIEAIDKF 1290 Query: 511 IAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +++ S G++S E ++L AD LY AK+ GRNRV Sbjct: 1291 -----PFKVTMSFGIASYPEVLVKTSDELVGYADDALYKAKELGRNRV 1333 >UniRef50_A6VTA2 Diguanylate cyclase n=2 Tax=Marinomonas RepID=A6VTA2_MARMS Length = 508 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/185 (40%), Positives = 104/185 (56%), Gaps = 6/185 (3%) Query: 380 IRRMVSNMYVLQSSLQ---WQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVD 436 + RM + L+S LQ QA D+LT L NR A + PL K+ Q Q + D Sbjct: 326 VTRMEKDTVSLRSLLQEKLAQAMTDSLTDLPNRTAYQDAILPLCKIMQKTQKSICLAVCD 385 Query: 437 LDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEV 496 +DHFK +ND +GH AGD+VL I S+L +D+ R GGEEF + P +L +A E Sbjct: 386 IDHFKKVNDTWGHLAGDKVLRLVPKQIRSALLKEDLMFRYGGEEFVIAFPETTLEQAVER 445 Query: 497 AERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRN 556 AE IRL + K + + IS S+G+ +E + E L + AD++LY+AK+AGRN Sbjct: 446 AEAIRLAV-AKTPFNMQGEPVSISISIGI--AELQAQENPESLFARADKQLYMAKEAGRN 502 Query: 557 RVFAS 561 RV A+ Sbjct: 503 RVMAN 507 >UniRef50_Q085X7 Diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q085X7_SHEFN Length = 357 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/199 (36%), Positives = 114/199 (57%), Gaps = 7/199 (3%) Query: 364 LLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQ--AWHDTLTRLYNR-GALFEKARPLA 420 L+ + TT L + Y RM+S L+ ++Q A D LT L NR AL + + Sbjct: 154 LILSFLTTTFLSALYEYSRMLSYNSALKLGKKYQQLALSDPLTTLANRRNALTILQQEKS 213 Query: 421 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 ++ + ++ P SV+ DLDHFK +ND++GH GD VL+ + + S+R QD R GGEE Sbjct: 214 RISRNNE-PLSVLLCDLDHFKMVNDKYGHNCGDMVLTELSQVFKQSVRQQDCVARWGGEE 272 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 540 F ILP S +A+ +AE+IR ++ ++ K IS ++ + S+ T D + ++L Sbjct: 273 FLFILPQTSAEQASVIAEKIRTNVHHHKVHFLKH---EISLTISIGISQLTDDQNIDELI 329 Query: 541 SLADRRLYLAKQAGRNRVF 559 + ADR LY AK+ GRN+V+ Sbjct: 330 NNADRNLYQAKKNGRNQVY 348 >UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X290_DESRD Length = 769 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 85/259 (32%), Positives = 137/259 (52%), Gaps = 17/259 (6%) Query: 310 LAQAMEHDTRGGI--RMDSRYVSWERLDHFDGVLVRVHTLSEG-VRGDFGSISIALTLLW 366 L + ++ R G+ + ++ + HF VL S+G +G+ +++ + + W Sbjct: 510 LTELTTNEVRAGLEAKAGPHFIDGSFIRHFHQVL-----FSKGHWQGELQNVTKSGRVFW 564 Query: 367 ALFTTMLL------ISWYV-IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPL 419 + L ++ YV +R+ V+ +S L+ A D+LT ++NR FE A Sbjct: 565 EFTSISPLQNEKGEVTHYVAVRKEVTAQKQAESKLRELATRDSLTGVWNRRYFFELAARE 624 Query: 420 AKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGE 479 + Q ++HP S+I D+DHFK IND +GH GD VL L+ ++LR D+ RVGGE Sbjct: 625 LESAQRYKHPLSLILYDIDHFKRINDTYGHMIGDEVLRQLTQLVGANLRNVDLLARVGGE 684 Query: 480 EFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQL 539 EF V+LP L +A VA RI +NE ++ ++ ++++ S+G+SSS D E L Sbjct: 685 EFAVLLPHTYLEQAHTVARRILRGVNEA-VIRTEAGPLQLTISIGMSSSAH-ADNCLESL 742 Query: 540 QSLADRRLYLAKQAGRNRV 558 AD+ LY AK GRN + Sbjct: 743 IHDADQALYAAKNKGRNSI 761 >UniRef50_C1D269 Putative metal dependent phosphohydrolase n=2 Tax=Deinococcus deserti VCD115 RepID=C1D269_DEIDV Length = 1251 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 69/167 (41%), Positives = 98/167 (58%), Gaps = 3/167 (1%) Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 L+ Q D LT +YNR + E + + P +++ VD+DHFK INDRF H GD Sbjct: 1088 LERQLREDALTGVYNRRFIEENVTIEYERHRNSGQPLAILMVDIDHFKQINDRFSHPVGD 1147 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 VL A + + RA D+ GR GGEEF +LP +++ +AAEVAERIR + EK Sbjct: 1148 EVLRRVARIFRETCRANDLIGRYGGEEFLFLLPNSNVRQAAEVAERIRSNI-EKYAWHEI 1206 Query: 514 STTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 +R++ SLG+ + +T + E++ S+AD +LY AK GRNRV A Sbjct: 1207 HEDLRVTLSLGICA--DTNVVNHEKMISIADAKLYEAKTGGRNRVVA 1251 >UniRef50_Q1JZ09 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ09_DESAC Length = 521 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/197 (37%), Positives = 110/197 (55%), Gaps = 4/197 (2%) Query: 364 LLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLC 423 +L A+ +LL + + R +Y+ Q L + D LT LYNR K Sbjct: 324 VLVAMAIIVLLTCYLFVSR--RKLYLAQQKLMRISERDPLTGLYNRRKFMNYYEKEWKAA 381 Query: 424 QTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFC 482 Q + P +V+ +D+DHFK ND +GH AGD L+ AG I + + R +D R GGEEF Sbjct: 382 QRSKTPLAVLMIDIDHFKDYNDHYGHLAGDVALTAVAGAIETRITRPRDCTARYGGEEFI 441 Query: 483 VILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTI-RISASLGVSSSEETGDYDFEQLQS 541 +LP AA+VAE+IR+++ + ++ A S T I+ S+G++S +E + +L + Sbjct: 442 GLLPETDDLAAAQVAEKIRIQVEKLQVQHAYSATADHITVSIGITSLQEGDKINRMELIN 501 Query: 542 LADRRLYLAKQAGRNRV 558 LAD+ LY AK+AGRN V Sbjct: 502 LADKALYEAKEAGRNCV 518 >UniRef50_B9TNG7 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TNG7_RICCO Length = 204 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/161 (39%), Positives = 94/161 (58%), Gaps = 2/161 (1%) Query: 398 AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLS 457 A D LT+++NR A +A + P + + +D+DHFK IND++GH AGD VL Sbjct: 27 AMTDPLTKIFNRRAFMIQAEKELAAAERSGLPLAFLMLDIDHFKQINDKYGHAAGDEVLV 86 Query: 458 HAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTI 517 ++SS LR QD GR GGEEFC +LPG A +AE++RL++ + + + ++ Sbjct: 87 RIVEVLSSHLRKQDTLGRYGGEEFCALLPGTDAQGAMALAEKLRLEVAMTRIEV-EENSL 145 Query: 518 RISASLGVSSSEETG-DYDFEQLQSLADRRLYLAKQAGRNR 557 ++ S+G S+ E G D+ +L ADR LY AK GRNR Sbjct: 146 GLTLSIGGSTWEHLGPTKDYRELMEEADRALYQAKTGGRNR 186 >UniRef50_Q31IP8 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31IP8_THICR Length = 540 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/177 (37%), Positives = 98/177 (55%), Gaps = 1/177 (0%) Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 +++ + L + L+ +A D LT L NR A FE+A + + H P S++ +D+DHFK Sbjct: 356 KLMEQLGSLLNQLRDEATKDYLTGLLNRKAFFEQAEQIWLSAKEHHQPISLLMIDIDHFK 415 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 IND FGH AGDRVL A + S + R +D+ R GGEEF ++L E A R++ Sbjct: 416 RINDSFGHDAGDRVLIEVANVFSQNCREEDLVCRYGGEEFIILLENKDEQPTLEFASRLK 475 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 K+ ++ + + IR S S+GV++ E S AD+ LY AK GRNRV Sbjct: 476 -KVIQEMSVSEQGEVIRFSISVGVATGSALELNSIETFISHADQALYQAKANGRNRV 531 >UniRef50_B9R5N2 GGDEF domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R5N2_9RHOB Length = 298 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 78/194 (40%), Positives = 98/194 (50%), Gaps = 10/194 (5%) Query: 366 WALFTTMLLISWYVIRRMVSNMYVLQS---SLQWQAWHDTLTRLYNRGALFEKARPLAKL 422 WALF Y ++ LQ SL A D LT L NR L E+ L Sbjct: 105 WALFDATNRSKLY--DELIETREKLQDQAESLANLAKRDALTGLLNRRELSEQFAMLLSQ 162 Query: 423 CQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFC 482 SV+ +D+DHFK IND +GHQ GD VL GL+ S R DVA R GGEEF Sbjct: 163 ANRADRALSVLLIDIDHFKTINDEYGHQRGDTVLREFGGLLQKSCRTGDVAARYGGEEFV 222 Query: 483 VILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSL 542 V+LP +T+AA+ A+RI KL+ E+ +R S S+G+S + D E + Sbjct: 223 VLLPDTGITDAAKRADRIHEKLSGIEV-----GGLRFSVSIGISEKKAPVATDAENMIKK 277 Query: 543 ADRRLYLAKQAGRN 556 AD LYLAK AGR Sbjct: 278 ADEALYLAKNAGRG 291 >UniRef50_B1KER8 Diguanylate cyclase n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KER8_SHEWM Length = 659 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 75/204 (36%), Positives = 105/204 (51%), Gaps = 21/204 (10%) Query: 355 FGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFE 414 F +S++LT L AL+ I W I A D+LT LYNR L Sbjct: 434 FAIVSVSLTSLAALWINRRRIRWGKI-----------------ANTDSLTNLYNRRYLSH 476 Query: 415 KARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAG 474 K L K + P S I +D+D FK +ND +GH GD VL A L +++R +D+ Sbjct: 477 KLLSLNK--PDNDAPLSCILLDIDLFKVVNDSYGHIVGDEVLVKVATLFINNVREKDICA 534 Query: 475 RVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDY 534 R+GGEEF ++LP +L +A+++AE +RLK+ K I++S GV E + Sbjct: 535 RIGGEEFMILLPNTNLQQASDIAEDLRLKIESLHFASLKGEPFTITSSFGV--VEAGKEQ 592 Query: 535 DFEQLQSLADRRLYLAKQAGRNRV 558 F +L + D LY AKQ GRNRV Sbjct: 593 SFSELSNAVDLLLYTAKQNGRNRV 616 >UniRef50_B2TQF1 Ggdef domain protein n=3 Tax=Clostridium botulinum RepID=B2TQF1_CLOBB Length = 695 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 94/161 (58%), Gaps = 2/161 (1%) Query: 398 AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLS 457 A +D+LT ++NR + + + + FS+I +D+D+FK INDR+GH GD VL Sbjct: 530 AKYDSLTGMFNRNVILTQGERIFNNKLETKQTFSIIMIDVDYFKQINDRYGHDIGDIVLR 589 Query: 458 HAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKL-NEKEMLIAKSTT 516 + +I S +R D GR GGEEF ++LP +L EA ++A+RIR + N K + Sbjct: 590 DISSIIKSEIRNTDSLGRYGGEEFLILLPNINLEEAKKIADRIRKSVENYKYHYLTSEKH 649 Query: 517 IRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 R++ SLGV + ++DF + AD+ LY+AK GRNR Sbjct: 650 NRVTLSLGVYEFNK-NEFDFFEGVKKADKALYMAKSLGRNR 689 >UniRef50_Q3A271 Sensor histidine kinase/FOG: GGDEF domain protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A271_PELCD Length = 422 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 65/156 (41%), Positives = 93/156 (59%), Gaps = 2/156 (1%) Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D LT L NR A FE L H H FS+I +D+DHFK IND +GH+ GD L A Sbjct: 260 DPLTGLSNRRAFFEYGLLLENQIARHHHHFSIIMLDIDHFKKINDCYGHEMGDEALKTLA 319 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRIS 520 +++ +R+ D+ GR+GGEEF +I+P AS EAA ++ER++ ++ K +L IR + Sbjct: 320 EHLNAIVRSSDILGRLGGEEFAIIMPHASSEEAAIMSERLKTAIS-KIVLSDNEQRIRFT 378 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRN 556 S G++ E F+Q+ + AD+ LY AK GRN Sbjct: 379 VSFGIAECNEKIT-SFQQVLNNADKALYQAKNEGRN 413 >UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, putative n=9 Tax=Proteobacteria RepID=Q48M78_PSE14 Length = 459 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 76/185 (41%), Positives = 106/185 (57%), Gaps = 7/185 (3%) Query: 375 ISWYV-IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 I+ YV I + V+ + L A D LT L NR A L + PFS+I Sbjct: 271 ITHYVSISQDVTTRLGREQKLLEIAHSDPLTGLNNRRAAEHTLERLIDTARISGKPFSLI 330 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEA 493 D+DHFK++NDR+GH AGDRVL+ A ++ +R QDVA R GGEEF +++P +SL A Sbjct: 331 IGDIDHFKSVNDRYGHPAGDRVLTSVAVILKQRIRLQDVAARWGGEEFLILVPDSSLDHA 390 Query: 494 AEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 AE+A+RIR + +++LI + ++ IS + S ET L AD+ LY AK+ Sbjct: 391 AELADRIRKGV--EDLLIPNTGSVTISLGVAQLSPGETA----ASLIQRADKALYQAKRR 444 Query: 554 GRNRV 558 GRNRV Sbjct: 445 GRNRV 449 >UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VQN9_VIBSL Length = 405 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 69/171 (40%), Positives = 98/171 (57%), Gaps = 4/171 (2%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L SL + D+LT+LYNR A+ E R H HP SVI +D+DHFK +ND+ GH Sbjct: 217 LMQSLYSSSMKDSLTQLYNRRAMNEMLRREWMRSVRHNHPLSVIILDIDHFKQVNDQHGH 276 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 Q GD+VL ++ +LRA D+ R GGEEF ++LP + EA +VAE++R+ + E + Sbjct: 277 QTGDQVLKKIGIILQHNLRAADIPFRYGGEEFLIVLPDTRIGEACKVAEKLRIIIEETKF 336 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 +S ++AS G+ SE + + AD LY AK+ GRN V A Sbjct: 337 WRQQSA--NLTASFGL--SELWAEDKVPSMIKRADEALYYAKENGRNTVCA 383 >UniRef50_C6CSA8 Diguanylate cyclase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSA8_PAESJ Length = 533 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 71/170 (41%), Positives = 97/170 (57%), Gaps = 9/170 (5%) Query: 391 QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ 450 + L +A D LT L NR + + L + PFSVI +DLDHFK +NDR GHQ Sbjct: 363 KEELHAEANTDALTGLTNRRTM----GAITALWKQQGTPFSVIIMDLDHFKNVNDRHGHQ 418 Query: 451 AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEML 510 GD VL AG++ S D R GGEEF ++LP A+ EA +VAERIRL++ + Sbjct: 419 MGDEVLKFVAGIMVSERGPDDYCCRFGGEEFTMLLPHATEAEAVQVAERIRLRIEQSVTP 478 Query: 511 IAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 I +S T+ SLGV++ + + + +L AD+ LY AK+ GRNR A Sbjct: 479 IGESVTM----SLGVATFPDAAE-EVVELFKYADQALYQAKRDGRNRTVA 523 >UniRef50_Q089V9 Diguanylate cyclase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q089V9_SHEFN Length = 426 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 3/162 (1%) Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D LT L+NR +L K + L + +S++ +DLDHFK IND +GH AGD VL + A Sbjct: 247 DQLTGLWNRHSLLNKLEEVDALWLRNGLAYSLMVLDLDHFKRINDTYGHLAGDMVLKNTA 306 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRIS 520 ++ SLR D R GGEEF +ILP + EA VAE+++ K+NE +L K+ I+ Sbjct: 307 DILQKSLRKIDFVCRYGGEEFLIILPLTNKKEAQIVAEKVQQKINENTVLWQKT---HIN 363 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 +L + + EQL LAD +YLAK GRN + + D Sbjct: 364 TTLSIGYATCKTHLSIEQLLQLADDAMYLAKSKGRNTICSMD 405 >UniRef50_B1KMS8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KMS8_SHEWM Length = 482 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 101/169 (59%), Gaps = 3/169 (1%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L++ L+ A D LT YNR E ++ + + F+++ +DLD FK+IND+FGH Sbjct: 303 LETQLRILASTDPLTGAYNRRCFNELSQKSMSSTERQEQEFTILLIDLDFFKSINDKFGH 362 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 AGD VL I++ +R D+ GR GGEEF V LP + +A EVA RIRL + E + Sbjct: 363 AAGDDVLIETVKAINTCIRESDILGRYGGEEFVVALPNSDNKKAREVANRIRLCI-ENMV 421 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + + I+++AS+G+++S +G + E+ + AD LY AK GRN+V Sbjct: 422 VKTQGHDIKLTASIGLATS--SGGHQLEKQINQADTYLYYAKDNGRNQV 468 >UniRef50_Q12RA2 Diguanylate cyclase n=1 Tax=Shewanella denitrificans OS217 RepID=Q12RA2_SHEDO Length = 604 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 70/162 (43%), Positives = 96/162 (59%), Gaps = 5/162 (3%) Query: 398 AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLS 457 A D LT+L NR + KA K H+ PF++I D+DHFK +ND++GH GD+VL Sbjct: 444 ALTDELTKLANRRHCYAKANTSLKHAIKHRIPFAIISFDIDHFKRVNDQWGHDVGDKVLI 503 Query: 458 HAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE-MLIAKSTT 516 AG+ ++ +R D+ GRVGGEEF V+LP A+ +A E+AERI + + + + T Sbjct: 504 TMAGICTNLMRKSDIIGRVGGEEFLVVLPNANKEQALEIAERIVTSVAQAQWQHLTPDTP 563 Query: 517 IRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 ISA GV+S T + QL AD+ LY AK AGRN V Sbjct: 564 QTISA--GVTSL--TNETSLAQLLLKADQGLYSAKSAGRNCV 601 >UniRef50_B8CXG9 Diguanylate cyclase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXG9_HALOH Length = 499 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 65/174 (37%), Positives = 105/174 (60%), Gaps = 9/174 (5%) Query: 390 LQSSLQWQ-----AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAIN 444 LQ++L ++ A D LT LYN + L K Q ++HP ++I +D+D+FK +N Sbjct: 327 LQNALLYKKQEEMANRDGLTGLYNHAYFQNRLHLLLK--QENKHPLTLIIMDIDNFKQVN 384 Query: 445 DRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKL 504 DRFGH GD+VL A L+ +LR D+ R GGEEF +ILP L + +A+R+R + Sbjct: 385 DRFGHLVGDKVLKELAHLLKHNLREGDLIARYGGEEFAIILPETELKQGEFIAKRLRKLI 444 Query: 505 NEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 ++ E+++ + ++ I+ S+GV+ + + E+ AD+ LY AK+AG+NRV Sbjct: 445 SDNEIVLDNNRSLYITVSIGVAQYNKK--WSQEEFIDKADQALYKAKEAGKNRV 496 >UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRA7_DESBD Length = 495 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 81/205 (39%), Positives = 110/205 (53%), Gaps = 11/205 (5%) Query: 355 FGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFE 414 +G SI L L+ A +T+L+ + R + + S+ D LT NR A E Sbjct: 292 YGGASIVLVLVVAGLSTLLVRGQIRLNRQSRELALAAST-------DMLTGALNRRAFME 344 Query: 415 KA-RPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVA 473 A R A++C+ H S I +DLDHFK +ND +GH AGD VLS +A I+S LR D+ Sbjct: 345 SASREFARVCRYGGH-LSCIMIDLDHFKNVNDTYGHAAGDLVLSSSAHYIASRLREPDMF 403 Query: 474 GRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGD 533 R GGEEF ++LPG AA VAE +R L + L + ++AS GV+ Sbjct: 404 CRYGGEEFVILLPGTDRNGAATVAEELRAGLAGLD-LQRGDEKLPLTASFGVAEIHAQC- 461 Query: 534 YDFEQLQSLADRRLYLAKQAGRNRV 558 + L SLAD+ LY AK+ GRNRV Sbjct: 462 ATLDTLLSLADQALYEAKENGRNRV 486 >UniRef50_A8UWW7 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWW7_9AQUI Length = 540 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 4/162 (2%) Query: 397 QAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVL 456 +A+ D+LT ++NR A E R L + T P SV+ +D+D FK +ND GHQ GD+VL Sbjct: 379 KAYMDSLTGVFNRRAFDEFGRELIERFLTLSKPISVLMIDVDDFKRVNDSHGHQVGDQVL 438 Query: 457 SHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTT 516 + LI +LR D+ R GGEEF +LPG SL A +++R ++ Sbjct: 439 AELGRLIRETLRETDIVFRYGGEEFLALLPGTSLEGALRAGDKVRRRVEAHSFPPGDQ-- 496 Query: 517 IRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 RI+ S+GV+ E GD E + S ADR LY+AK+ G+NRV Sbjct: 497 -RITVSVGVAQGTE-GDERAEDVVSRADRALYIAKKTGKNRV 536 >UniRef50_Q0ATH2 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Maricaulis maris MCS10 RepID=Q0ATH2_MARMM Length = 324 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 71/179 (39%), Positives = 95/179 (53%), Gaps = 3/179 (1%) Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 R S + +Q + A D LT NR A + ++ P SV+ +DLDHFK Sbjct: 129 RAASRLVRMQKQFKRLAETDALTGAANRRAFMQYLEIQSQRATRDDIPLSVVMIDLDHFK 188 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 ++ND GH GD VL A I + LR D+ GR+GGEEFCVILPGA L A ERIR Sbjct: 189 SVNDTHGHATGDTVLIEAVKSIQACLRDNDMLGRLGGEEFCVILPGAGLFSAGIAGERIR 248 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDY--DFEQLQSLADRRLYLAKQAGRNRV 558 + + + + ++ASLGV+S + GD + L AD LY AK+ GRN+V Sbjct: 249 AAVEAMTISTDEGVPVPVTASLGVASLTD-GDLISAPDTLLQTADVALYRAKETGRNKV 306 >UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NS82_9VIBR Length = 385 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 122/229 (53%), Gaps = 24/229 (10%) Query: 332 ERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQ 391 ER+D F + G+ +S L +++ F+ ++W + R+V+ +Y Sbjct: 179 ERIDDF---------MISGMAHQLAFVSTLLMVIFIGFS----VTWMLTGRLVATIY--D 223 Query: 392 SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQA 451 +S++ D LT+LYNR AL E H+ P SV+ +D+DHFK +ND +GHQA Sbjct: 224 TSIK-----DELTQLYNRRALEELLPKEIARSSRHKQPLSVLLLDIDHFKKVNDTYGHQA 278 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GDRVL L+ R D++ R GGEEF V+LP + +A VAE++R + ML Sbjct: 279 GDRVLRTTGKLLILQTRKDDLSFRYGGEEFLVLLPNTDVEKAVIVAEKLREAIKRARML- 337 Query: 512 AKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + +AS GV ++ G+ D++ AD+ LY AK+ GRN+V A Sbjct: 338 -PTNVDSCTASFGV--TQFNGEDDWQTAIERADQALYSAKENGRNQVTA 383 >UniRef50_A3Y6S3 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y6S3_9GAMM Length = 299 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 16/190 (8%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 I+R V+ Q+ L+ + D LT L NR E A Q +S++ +D+D+ Sbjct: 119 IQRDVTEYIYTQNKLEELSRTDPLTGLINRRVFDEMAEKEFYRYQNQNIHYSLLALDIDY 178 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK IND++GH GD VL+ + L ++R+QD R+GGEEFC+ILP A EVAE+ Sbjct: 179 FKRINDKYGHLTGDYVLASFSTLCEKNIRSQDKIARIGGEEFCIILPATDKVGAIEVAEK 238 Query: 500 I-------RLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQ 552 + R K +E E I ++ S+GVS + DYD+ + AD LY AK Sbjct: 239 LRRAISNARFKQDEHE--------IAVTVSIGVSQV-KMSDYDYVAMLKRADENLYRAKH 289 Query: 553 AGRNRVFASD 562 GRN+V++ D Sbjct: 290 QGRNQVYSQD 299 >UniRef50_C7QE19 Diguanylate cyclase n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QE19_CATAD Length = 592 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 96/269 (35%), Positives = 133/269 (49%), Gaps = 18/269 (6%) Query: 305 RELALLAQAMEHDTRGGIRM---DSRYVSWER-----LDHFDGVLVRVHTLSEGV----R 352 RE+AL A + GG R SR+ S R L + L++G+ R Sbjct: 310 REVALTIAAPDIPAPGGTRFIDSPSRWGSLLRTVRGILPYLAAAFCLAGVLADGLDTARR 369 Query: 353 GDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGAL 412 D + +L AL L + + +R+ ++ ++LQ A+HD LT L NR L Sbjct: 370 MDPVVLIAGAAVLVALVARQAL-TLFENQRLTEDLRRAAATLQHHAYHDPLTGLANRALL 428 Query: 413 FEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDV 472 ++ Q P +VI +DLD FK +ND GH+ GDRVL AAG IS SLR D Sbjct: 429 TDRLEHALTQRQAEWEPVAVIFLDLDGFKGVNDSVGHETGDRVLVEAAGRISGSLRVGDT 488 Query: 473 AGRVGGEEFCVILP-GASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEET 531 R GG+EF ++L G ++ A VAERIR +L E+ + + + AS+GV+ SE Sbjct: 489 VARFGGDEFVIVLEVGTTVGGALVVAERIRGRLCEEYRI--EGPAHHLGASIGVAFSEPG 546 Query: 532 GDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 G L AD +Y AK AGRNRV A Sbjct: 547 GSA--SNLLRRADAAMYRAKTAGRNRVVA 573 >UniRef50_A7ZJI1 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Escherichia coli RepID=A7ZJI1_ECO24 Length = 443 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 112/197 (56%), Gaps = 21/197 (10%) Query: 376 SWYVIR--RMVSNMYVLQSSLQW----------QAWHDTLTRLYNRGALFEKARPLAKLC 423 +WY+ + ++S +Y++ + + + A HD LT YNR + + ++K Sbjct: 249 AWYMTKFLELISMIYIISTLMYYVFRKLNHANHMAIHDPLTNTYNRRYFIDSLKNISK-- 306 Query: 424 QTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCV 483 H FSVI +D+D FK+IND++GH GD+V+ +I S+R +D+ GR+GGEEF + Sbjct: 307 ---HHDFSVIMLDIDSFKSINDKWGHHMGDQVIVMVTRIIKKSIRKEDILGRLGGEEFGI 363 Query: 484 ILPGASLTEAAEVAERIRLKLNEK--EMLIAKSTTIRISASLGVSSSEETGDYDFEQLQS 541 I+ G + +AERIR + E+ E L++ +I+ S+G +S+E E L + Sbjct: 364 IIKGNTQKLLLSIAERIRKNIEEQCSEKLLSHGPE-KITVSIGCFTSKENNLSPSEMLVN 422 Query: 542 LADRRLYLAKQAGRNRV 558 AD+ LY AK+ G+N+V Sbjct: 423 -ADKALYQAKRTGKNKV 438 >UniRef50_Q30PB2 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30PB2_SULDN Length = 555 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 64/177 (36%), Positives = 100/177 (56%), Gaps = 8/177 (4%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 +++ + Q L+ D LT++ NR ++ + + +P S++ D+D+FK I Sbjct: 386 ITDEKIYQKELEHTNITDPLTKIRNRYCYNKQIKKECASSNRYFYPLSLVIFDMDNFKNI 445 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND +GH GD+VL LI++ LR D+ R+GGEEF +ILP + ++A ++A++IR K Sbjct: 446 NDNYGHDVGDKVLIEYTKLITTCLRDSDIFCRIGGEEFALILPHVNKSDAYKLADKIRSK 505 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + E ++A I+ S GV +E D D E AD+ LY AK AGRNRV A Sbjct: 506 VQEHNQIVA------ITMSFGV--TEYKKDEDLELTFKRADKALYEAKNAGRNRVVA 554 >UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UB95_XANAL Length = 595 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 71/173 (41%), Positives = 102/173 (58%), Gaps = 3/173 (1%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKA-RPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 L+ L+ Q+ D LT LYNR L E R L++ C P +++ +DLDHFKA+NDRFG Sbjct: 410 LRHRLRTQSIRDPLTGLYNRRYLEESLLRELSR-CARRDLPLALMMLDLDHFKALNDRFG 468 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H GD +L+ L+ +R +D+A R GGEEF VILPGA+ A AE+IR + + + Sbjct: 469 HAGGDALLAAFGQLLGGLVRPEDIACRYGGEEFTVILPGAAADVAQRRAEQIRAAVEQMQ 528 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + I+ S+GV++ E G E+L AD LY K++GRNRV ++ Sbjct: 529 VQHHGQMLPSITVSIGVAAYPEHGSTG-EELLRCADAALYCGKRSGRNRVASA 580 >UniRef50_A8H680 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8H680_SHEPA Length = 261 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 73/190 (38%), Positives = 103/190 (54%), Gaps = 2/190 (1%) Query: 374 LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 ++SW +I ++ + L+ ++ A D LT L NR A F A + SVI Sbjct: 74 IVSWPLIS-LLMKVDSLEKEMRLLASLDPLTELLNRRAFFRDAELYIHRAKQEGRMLSVI 132 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEA 493 +DLD FKAIND +GH AGD VL H + I ++ R D+ GR+GGEEF ++LP S + A Sbjct: 133 ALDLDKFKAINDCYGHSAGDAVLRHFSTTIRANCRTSDLMGRLGGEEFALLLPNTSASAA 192 Query: 494 AEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 +AER+ L + S T+R + S+GV S + E L + ADR LYLAK+ Sbjct: 193 YALAERLHQALRLTAIQYGHS-TMRYTVSIGVISVVPQKTDNIEALLNKADRSLYLAKET 251 Query: 554 GRNRVFASDN 563 GRN D+ Sbjct: 252 GRNCTVVFDS 261 >UniRef50_A4G925 Putative uncharacterized protein n=2 Tax=Herminiimonas arsenicoxydans RepID=A4G925_HERAR Length = 362 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 67/171 (39%), Positives = 93/171 (54%), Gaps = 5/171 (2%) Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 LQ D LT + NR + + Q H H S + +DLD FK +ND +GHQ GD Sbjct: 189 LQHIGLTDPLTGVNNRRYVERRLLEEVGRTQRHGHTLSAMYIDLDFFKKVNDNYGHQGGD 248 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 VL A I + LR D GR GGEEF V+L A + A VAER+R + + ++++ Sbjct: 249 EVLREVAARIKAELRLSDALGRFGGEEFVVLLIDAGMEAALAVAERMRSSIANRPLVLSS 308 Query: 514 STTIRISASLGVSSSEETGDYD-----FEQLQSLADRRLYLAKQAGRNRVF 559 +R+S S+GVS+ + D +QL + AD+ LYLAKQ GRN+V Sbjct: 309 GEQLRLSVSIGVSTLQAIERKDEVATIAQQLLAKADQALYLAKQGGRNKVM 359 >UniRef50_UPI0001850FCC diguanylate cyclase n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850FCC Length = 340 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 67/172 (38%), Positives = 97/172 (56%), Gaps = 8/172 (4%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 +Q L+ A D LT+++NR E A L T Q +V+ D+DHFK +ND +GH Sbjct: 160 MQRQLKELATIDGLTKIWNRTYFMELAEALVDKLHTQQEQLAVVMFDIDHFKQVNDTYGH 219 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 + GD VL H A L+ LR++D+ GR GGEEF + + G + EA E + IRL +++ Sbjct: 220 ETGDYVLEHVASLVKDMLRSEDLFGRYGGEEFIICMAGVTSLEAEERSNDIRLAISKFNQ 279 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSL---ADRRLYLAKQAGRNRV 558 I I++S GV+ G+ + E+L+ L AD LY AK+ GRNRV Sbjct: 280 W-GIGVPITITSSFGVAC----GNINKEELKPLIRKADFALYHAKENGRNRV 326 >UniRef50_A8UT68 Putative uncharacterized protein n=2 Tax=Aquificaceae RepID=A8UT68_9AQUI Length = 620 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 69/169 (40%), Positives = 93/169 (55%), Gaps = 1/169 (0%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L LQ Q++ D LT LYNR L E A L+ + ++ +D+D+FK IND++GH Sbjct: 440 LMELLQQQSYIDQLTGLYNRRFLDEIADKLSAQVKRRGTSLGILMIDIDYFKQINDKYGH 499 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 GDRVL A +I SS+R D R GGEE V+L A +VAE+IR + K + Sbjct: 500 DVGDRVLKEIASIIKSSVREADYVIRFGGEEILVLLVDVREGTAKKVAEKIRRAIENKVI 559 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 I+ I+ + S+GVS + D F Q AD LY AK+ GRNRV Sbjct: 560 EIS-GGVIKKTVSIGVSEFPKDCDGKFWQCIKFADVALYRAKEEGRNRV 607 >UniRef50_C1DGF8 GGDEF protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGF8_AZOVD Length = 318 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 73/178 (41%), Positives = 98/178 (55%), Gaps = 2/178 (1%) Query: 381 RRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHF 440 +R+ + + + A D LT L NR A F+ + P +VI DLDHF Sbjct: 138 KRIEEELAAAKHQAEALAHVDELTGLNNRRAFFQLGLQAFRQAARAAGPIAVIMFDLDHF 197 Query: 441 KAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERI 500 K IND GH GD+VL A + S +R D+AGR+GGEEF +ILP +L+EA AER+ Sbjct: 198 KQINDAHGHLVGDKVLVAVANGMRSQIREADIAGRLGGEEFALILPETTLSEALTAAERL 257 Query: 501 RLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 R + L S I+ ++S GV+ E+ G D E + SLAD LY AK+ GRNRV Sbjct: 258 RGVIAATR-LAHGSIHIQCTSSFGVAVCED-GSLDLEHMLSLADAGLYKAKRNGRNRV 313 >UniRef50_A0NNQ3 Intracellular signaling protein (PAS,GAF,GGDEF domains) n=2 Tax=Labrenzia RepID=A0NNQ3_9RHOB Length = 723 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 67/167 (40%), Positives = 99/167 (59%), Gaps = 5/167 (2%) Query: 393 SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAG 452 +L+ A D LT++ NR A E+A + + + PF+ + +D+D FK IND +GH G Sbjct: 547 NLERVASIDDLTQILNRRAFLERANTEVQRFRRTKRPFTAVMMDIDKFKQINDLYGHATG 606 Query: 453 DRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK-LNEKEMLI 511 D VL A +SS+LR+ D+ GRVGGEEFC+IL A L +A V ER+R + + E ++ I Sbjct: 607 DEVLRKFADTVSSALRSVDIFGRVGGEEFCMILHNADLEDAMLVCERLRQRIIAECQLDI 666 Query: 512 AKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 K T ++ S+G+++ D +F L AD LY AK GRN+ Sbjct: 667 VKQT---VTCSMGLAAVARE-DLEFSTLMQKADTALYEAKSTGRNKC 709 >UniRef50_A6Q580 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q580_NITSB Length = 332 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 105/185 (56%), Gaps = 9/185 (4%) Query: 380 IRRMVSNMYVLQSSLQWQ---AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVD 436 I + + V++ + + Q A HD LT LYNR AL + KL + P+SVI +D Sbjct: 153 IEKSKKKLIVIEDAFKQQEKEAVHDPLTNLYNRNAL----KKEIKLLEEASLPYSVIIID 208 Query: 437 LDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEV 496 +D FK IND FGH AGD+VL + + +R R GGEEF +IL + A ++ Sbjct: 209 IDDFKKINDTFGHIAGDKVLRELGEIFHTYVRKDSKVYRYGGEEFLIILLHTDIDGAKKL 268 Query: 497 AERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRN 556 A+R++ ++ +++ T I ++AS G+ +++ GD FE++ AD+ LY AK+ G+N Sbjct: 269 AQRLKEVISHHTIVLDDGTNIIVTASFGI--AQKKGDESFERVLKRADQALYKAKRDGKN 326 Query: 557 RVFAS 561 RV S Sbjct: 327 RVEVS 331 >UniRef50_Q2RR54 Putative diguanylate cyclase (GGDEF domain) n=2 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RR54_RHORT Length = 582 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 71/187 (37%), Positives = 105/187 (56%), Gaps = 5/187 (2%) Query: 382 RMVSNMYVLQSSLQWQAWH----DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDL 437 R+V Y+ + L+ +A D LT + NR + FE A P +V+ +D+ Sbjct: 392 RLVKESYLAERDLKARAEREARVDYLTGVLNRRSFFELAEGELARSIRFGRPLAVLMIDI 451 Query: 438 DHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVA 497 D+FKA+ND +GH GD VL + AGLI +LR D+ GR GGEEF ++ AS +EA EVA Sbjct: 452 DYFKAVNDTWGHGVGDEVLQNVAGLIGQTLRGADIFGRTGGEEFTAVIVEASGSEALEVA 511 Query: 498 ERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 +R+ + + +++ I ++ S+GVS D FE L AD+ +Y AK+AGRNR Sbjct: 512 QRLCAVVAQGKIVGPGGEAIGVTLSIGVSLLRGR-DMAFEILSREADQAMYGAKRAGRNR 570 Query: 558 VFASDNA 564 V +A Sbjct: 571 VVVHRDA 577 >UniRef50_C6B066 Diguanylate cyclase n=11 Tax=Rhizobium RepID=C6B066_RHILS Length = 539 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 71/184 (38%), Positives = 99/184 (53%), Gaps = 1/184 (0%) Query: 379 VIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLD 438 +I R+ + L L+ A D LT LYNR A L + SV+ DLD Sbjct: 332 LIDRLTQDRETLVGELRSAAQTDLLTGLYNRRGFEVAASALLTQAEHGSRWISVVLFDLD 391 Query: 439 HFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 HFK IND GH AGD VL H AG+ + R+ D+ R GGEEF +LP ++ +AA VAE Sbjct: 392 HFKKINDVHGHDAGDAVLRHVAGVARKNFRSFDLLVRHGGEEFLALLPDSTPDDAAIVAE 451 Query: 499 RIRLKLNEKEMLIAKSTTIRISASLGVSS-SEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 R+RL + E+ + ++++AS G + + E + +FE L AD LY AK +GRN Sbjct: 452 RVRLAIEAAEIPLPSGDVLKVTASFGCAGRANEATNRNFEDLVKRADLALYAAKASGRNC 511 Query: 558 VFAS 561 V + Sbjct: 512 VVSG 515 >UniRef50_B4S2W9 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Alteromonas macleodii RepID=B4S2W9_ALTMD Length = 353 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 70/166 (42%), Positives = 93/166 (56%), Gaps = 11/166 (6%) Query: 397 QAWHDTLTRLYNR----GALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAG 452 QA D LT+L NR FEKA P S + VD+DHFK IND +GH G Sbjct: 193 QANTDPLTKLPNRRFLEAVFFEKAMQ----DPATYFPLSAVVVDIDHFKKINDSYGHDVG 248 Query: 453 DRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA 512 D+VL H L+ ++R+ DV R GGEEF V+ P A+LT+A ++AE +R +L E+ +A Sbjct: 249 DQVLIHVTSLMKEAVRSSDVVARTGGEEFLVLFPHATLTQAVKLAETMR-RLIEERPFVA 307 Query: 513 KSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 I+AS GV+++ D + AD LY AK AGRNRV Sbjct: 308 GDINHPITASFGVATA--LTDTNLHASLKQADDNLYKAKNAGRNRV 351 >UniRef50_A6Q191 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q191_NITSB Length = 622 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 64/177 (36%), Positives = 100/177 (56%), Gaps = 6/177 (3%) Query: 387 MYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDR 446 +Y+ + +L A D LT L NR A K L + +Q FS++ +D+DHFK IND Sbjct: 451 VYLREQNLIKAAQTDVLTNLPNRSAYQMKLEEQMSLFERYQTVFSMLCIDIDHFKKINDT 510 Query: 447 FGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNE 506 +GH+AGD+VL A ++ +LR+ D R+GGEEF +LP L A + A+++R + + Sbjct: 511 YGHKAGDKVLQEVAKIMRKTLRSSDTVFRIGGEEFVALLPETDLVAAKQAAQKLRTMIQD 570 Query: 507 KEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 + K + ++ S+GV+ YD + D+ LY AKQ GRN+V +S+N Sbjct: 571 Q----MKLGSYNVTVSIGVTQVNFDDTYD--SIFMRCDKCLYHAKQNGRNQVVSSEN 621 >UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=Cyanothece RepID=B7JZG8_CYAP8 Length = 668 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 67/173 (38%), Positives = 98/173 (56%), Gaps = 2/173 (1%) Query: 390 LQSSLQWQAWHDTLTRLYNRGAL-FEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 L+ +L+ Q+ D LT L+NR L R L + Q + +I +D+DHFK ND FG Sbjct: 492 LRETLEEQSLRDPLTGLFNRRYLEISINRELNTIIQDQDYSLGLIMLDIDHFKQFNDNFG 551 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H+AGD VL A + + +R D+A R GGEEF +ILP ASL + E AE+IR + + + Sbjct: 552 HEAGDLVLQTVANCLQNHIRQSDIACRFGGEEFMIILPRASLNKTLERAEKIRESIKQLK 611 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + I+AS GV++ + G +L AD+ LY AK+ GR+RV + Sbjct: 612 IEYKSQPLDSITASFGVAAFPQNGT-TLHELFIDADKALYQAKKQGRDRVVCA 663 >UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D439_DEIDV Length = 633 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/175 (39%), Positives = 97/175 (55%), Gaps = 1/175 (0%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L+ SL+ Q+ D LT LYNR L E Q P +VI +D+DHFK ND GH Sbjct: 458 LRESLRQQSIRDPLTGLYNRRYLEESFERELHRAQRSDDPIAVIMLDIDHFKHFNDSHGH 517 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 +AGD +L L+S +RA+DVA R GGEEF ++ PG +L +A A+++R + + Sbjct: 518 EAGDELLRALGQLLSGCIRAEDVACRYGGEEFAMVFPGMTLDQATRWADQLRHTVESTQF 577 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 ++S SLGV++ + G + L AD LY AK+ GRNRV +D A Sbjct: 578 ASRGEALEQVSVSLGVAAFPQHGRH-LADLIRAADAALYRAKREGRNRVITADGA 631 >UniRef50_A4W9V5 Diguanylate cyclase n=1 Tax=Enterobacter sp. 638 RepID=A4W9V5_ENT38 Length = 473 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/164 (43%), Positives = 95/164 (57%), Gaps = 13/164 (7%) Query: 401 DTLTRLYNRGALFEKA-RPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHA 459 D LTRLYNR +E + L K+ T HP SVI DLD+FK IND +GH GD+VL Sbjct: 293 DALTRLYNRSYFYESLNQALGKI--TDSHPVSVIVCDLDYFKRINDNYGHLQGDKVLQFV 350 Query: 460 AGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNE-----KEMLIAKS 514 A L+ S+R QD+ R+GGEEF ++L A VAERIRL L+ E ++ +S Sbjct: 351 ANLLMDSVRPQDITARIGGEEFVLLLSNTHSEAARLVAERIRLSLSSFDRITTEGMLPES 410 Query: 515 TTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 TI S+G+ ++ T E+ AD+ +Y AK+ GRNRV Sbjct: 411 VTI----SMGIYTA-TTLPVTAEECVERADKAMYEAKETGRNRV 449 >UniRef50_B5XWN5 Diguanylate cyclase (GGDEF) domain protein n=5 Tax=Klebsiella RepID=B5XWN5_KLEP3 Length = 453 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 115/199 (57%), Gaps = 15/199 (7%) Query: 363 TLLWALFTTMLLISWYVIRRMVSNMYV--LQSSLQWQAWHDTLTRLYNRGALFEKA-RPL 419 TL +LLI +++ R ++ YV Q+S++ D LTRLYNR ++ + L Sbjct: 259 TLCTLFLILVLLIDVFMLYRESNHKYVHSYQNSIR-----DPLTRLYNRSFFYDTLNQQL 313 Query: 420 AKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGE 479 AK+ QHP SVI DLDHFK IND +GH AGD+V+ AA ++ + R D A R+GGE Sbjct: 314 AKV--NPQHPLSVIISDLDHFKRINDNYGHVAGDKVIQFAASVLENHSRVDDAAARIGGE 371 Query: 480 EFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQL 539 EF ++L + +A +AERIRL +N ++ + + R++ S+G+ ++ + E Sbjct: 372 EFALLLVNTAEKDALAIAERIRLAVNAEQHPLPE----RMTISMGLYTTRDRS-VSAETC 426 Query: 540 QSLADRRLYLAKQAGRNRV 558 AD +Y AK +GRNRV Sbjct: 427 VERADAAMYEAKNSGRNRV 445 >UniRef50_A6DD54 Diguanylate cyclase (GGDEF domain) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DD54_9PROT Length = 508 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 68/170 (40%), Positives = 97/170 (57%), Gaps = 3/170 (1%) Query: 392 SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQA 451 L + D LT + N+ A+ E+ + + + +SV+ D+DHFK IND +GH A Sbjct: 342 KKLSKEVKTDFLTNIANKKAIMEELKRQESSFKRYGTNYSVVFFDIDHFKNINDTYGHDA 401 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GD +L L R D+ GR GGEEF ILP ++ A + AE++R K+ EK + Sbjct: 402 GDVILKSLGLLFKRYARDVDMIGRFGGEEFVAILPNTNIDGACKFAEKLR-KIVEKTKFM 460 Query: 512 AKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 K+T I ++ S GV+S ET D E L+ LAD RLY AK++GRNR+ S Sbjct: 461 YKNTRINVTVSGGVASRNETNSMD-ETLK-LADERLYKAKRSGRNRIVCS 508 >UniRef50_Q3A5K1 Two component signal transduction response regulator n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5K1_PELCD Length = 323 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 7/188 (3%) Query: 375 ISWYVI-RRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 I W++ R + ++ QS L A D+LT LYNR C P S++ Sbjct: 119 IRWHLKNRERIHALHQAQSQLARIALTDSLTGLYNRAYFDATITQEVARCSRRGLPLSLL 178 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEA 493 VDLDHFK IND +GH AGD+ L+ A ++ R D R GGEEF VILP + A Sbjct: 179 MVDLDHFKKINDTYGHLAGDQALAAVALVLKEQSRISDTVCRFGGEEFAVILPETTNANA 238 Query: 494 AEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 A VAERIR K+++ ++ ++AS+GV S++ T + L + AD LY AK Sbjct: 239 ATVAERIRKKISQLDL------AFPVTASIGVGSAKVTNQLLPDHLIAEADGALYEAKSQ 292 Query: 554 GRNRVFAS 561 GRNRV +S Sbjct: 293 GRNRVQSS 300 >UniRef50_A4YQK9 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YQK9_BRASO Length = 379 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/179 (39%), Positives = 103/179 (57%), Gaps = 3/179 (1%) Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 R ++ + V + L+ + D LT +R A + L L + H+HP + +D+DHFK Sbjct: 145 RDLAALAVDELMLRNLSLRDGLTGALSRRAFRSEGERLRALAERHRHPLTCALLDVDHFK 204 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 ++ND GH AGD VLS G + LRA DV GR+GGEEF +ILP SL +A V E++R Sbjct: 205 SVNDNHGHAAGDLVLSKVVGACQNVLRASDVIGRLGGEEFGIILPHTSLDDAMAVLEKMR 264 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + + + + S IRI+AS G + + T F+ + + ADR +Y AK GRN+V A Sbjct: 265 SAVADLS-IESPSGPIRITASFG--AVDLTPGQPFDAMLARADRAMYAAKNGGRNQVIA 320 >UniRef50_A4BI17 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BI17_9GAMM Length = 606 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 93/159 (58%), Gaps = 2/159 (1%) Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D LT LYNR +L + + L + + S+I +D+DHFK INDRFGHQ GD L H A Sbjct: 440 DHLTGLYNRQSLDNRTKALFEQAEQSDSHLSLIMMDIDHFKPINDRFGHQVGDECLVHVA 499 Query: 461 GLISS-SLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRI 519 + +LR +D+ R GGEEF ++LP S+ A + E + +L+ KE + I++ Sbjct: 500 SFLRGLNLRHKDLIARFGGEEFTIVLPDTSIEHAQHLIEDVCTRLS-KETVSGSHYEIQL 558 Query: 520 SASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +AS G++ + +E+L AD+ LY AKQ GRNRV Sbjct: 559 TASFGIAERVISQAPSYEELIQKADQALYQAKQNGRNRV 597 >UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P7Y3_AZOSE Length = 313 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 82/229 (35%), Positives = 118/229 (51%), Gaps = 8/229 (3%) Query: 337 FDGVLVRVHTLSEGVRGDFGSISIALTLL-WALFTTMLLISWYVIRRMVSNMYVLQSSLQ 395 FDG H L R D I LT+ W F +S+ I R ++ L++ L+ Sbjct: 92 FDGETREFHAL----RKDGSEFPIELTVASW--FGEDRRLSFIGIIRDITERKRLEAELR 145 Query: 396 WQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRV 455 A D LT + NR E +HP ++I +D+D FK IND FGH GDRV Sbjct: 146 QLATTDPLTGILNRRRFTELTTQEIHRAHRLRHPLTLIMLDIDWFKRINDAFGHTVGDRV 205 Query: 456 LSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKST 515 + A +S LR D+ GR+GGEEF V+LP + + EVAER+R K+ ++ + Sbjct: 206 IQSLASACASELREIDILGRLGGEEFAVVLPELGASGSLEVAERLRQKVEGLQITLNDGR 265 Query: 516 TIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 +R + SLGV+ ++T D + L AD LY AK+ GRN V A+ ++ Sbjct: 266 IVRFTCSLGVAVLKDT-DQSPDTLLVRADNALYRAKRDGRNCVRAASDS 313 >UniRef50_B9L689 Diguanylate cyclase n=1 Tax=Nautilia profundicola AmH RepID=B9L689_NAUPA Length = 512 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 6/188 (3%) Query: 380 IRRMVSNMYVLQSSLQW---QAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVD 436 I ++ ++ L+ L+ + D LT + N+ A+ ++ + + + +SV+ D Sbjct: 327 IEKLRQKVHFLEGKLKQLSKEVKTDFLTDIANKKAVIDELKKQESIYNRYGTNYSVVFFD 386 Query: 437 LDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEV 496 +DHFK IND +GH AGD +L L R D+ GR GGEEF ILP A + Sbjct: 387 IDHFKNINDTYGHDAGDVILKSLGLLFKRYARDIDMIGRFGGEEFVAILPNTDKEGAYKF 446 Query: 497 AERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRN 556 AE++R ++ EK + K+T I ++ S GV+S ET D E L+ LAD+RLYLAK+ GRN Sbjct: 447 AEKLR-QIIEKTKFMYKNTRIDVTVSGGVASRNETNSSD-ETLK-LADKRLYLAKKTGRN 503 Query: 557 RVFASDNA 564 +V A D Sbjct: 504 KVCADDKC 511 >UniRef50_A1SVZ1 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SVZ1_PSYIN Length = 477 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 113/201 (56%), Gaps = 12/201 (5%) Query: 362 LTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAK 421 LL +L T+L+ ++I + V+ Y ++ A +D LT L NR A E+ Sbjct: 286 FNLLCSLLGTILIA--FLILKTVNKYY---KEMEHLAKYDALTNLKNRRAFNEELEHSLL 340 Query: 422 LCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEF 481 LC+ S+ DLD FK++ND FGHQ GD+VL + A ++ +R D+ GR GGEEF Sbjct: 341 LCKRRASHLSLTFFDLDDFKSVNDTFGHQTGDKVLQYVADILKDDIRQTDIIGRWGGEEF 400 Query: 482 CVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVS--SSEETGDYDFEQL 539 V L +A + E+IR + EK+ +++ ++++AS G++ ++++T D E+ Sbjct: 401 IVAFIDTELEDAKFITEKIRAHI-EKDSFLSQLKNMKVTASFGLTTITTQDTLDSLLER- 458 Query: 540 QSLADRRLYLAKQAGRNRVFA 560 AD+ LY AK+ G+N+VF Sbjct: 459 ---ADQALYKAKENGKNQVFC 476 >UniRef50_C4FJS9 Signal transduction response regulator n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FJS9_9AQUI Length = 349 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/169 (40%), Positives = 97/169 (57%), Gaps = 3/169 (1%) Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 ++ +A D LT L NR + L K + PF++I +DLD+FK IND+FGH AGD Sbjct: 184 VKQEATLDFLTGLTNRRSFDRALNDLIKDFNEKKIPFTLILLDLDNFKQINDKFGHPAGD 243 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 VL + L+ + LRA + GR+GGEEF +ILP +L VAE IR + E + Sbjct: 244 LVLKEVSNLLRTYLRANTIIGRLGGEEFGIILPNVTLENGKNVAEIIR-NVIENHEIKYD 302 Query: 514 STTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 IRISASLGV+ +E GD + + D LY AK+ G+N+V ++ Sbjct: 303 GNVIRISASLGVAQVKE-GDT-IDTIYRRVDEALYQAKRDGKNKVVVAE 349 >UniRef50_A8UVB7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UVB7_9AQUI Length = 525 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/166 (43%), Positives = 95/166 (57%), Gaps = 8/166 (4%) Query: 391 QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ 450 + L A HD LT +YNR AL + + PFSVI +DLD+FK +ND+FGHQ Sbjct: 363 ERKLHTLATHDQLTGVYNRRALLMFFEKYLHSARRYGIPFSVILIDLDNFKYVNDQFGHQ 422 Query: 451 AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEML 510 GDRVL A L+ SLR DV GR GGEEF +LP + VAE++R K+ E E Sbjct: 423 TGDRVLKTFAKLVKGSLRRTDVFGRWGGEEFLALLPFND--KPYMVAEKLRRKVEETEF- 479 Query: 511 IAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRN 556 S R++AS G ++ E GD D + + + AD LY AK+ G+N Sbjct: 480 ---SRVGRVTASFGATTYRE-GD-DIDSMMARADEALYEAKRKGKN 520 >UniRef50_D2U8Z2 Putative two-component system response regulator protein n=1 Tax=Xanthomonas albilineans RepID=D2U8Z2_XANAL Length = 460 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/175 (39%), Positives = 100/175 (57%), Gaps = 14/175 (8%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L +LQ A D LT L NR E+++ + C T Q SV +DLDHFK +ND GH Sbjct: 266 LIGTLQDLATRDFLTGLPNRRHFLEQSQRVLPQCLTDQQSVSVAMLDLDHFKHVNDTLGH 325 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 AGD L A ++++ R QD+ R GGEEFC+++PG + E++R ++ E ++ Sbjct: 326 DAGDEALRAVASVLTAYARPQDLIARFGGEEFCMLVPGLDEAATTDYFEKLRARIAELQV 385 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSL------ADRRLYLAKQAGRNRV 558 + + T+R++ S+GV SS+ Q Q+L AD+ LYLAK AGRNRV Sbjct: 386 NVGEK-TLRLTISIGVCSSQ-------IQNQALHPFLIEADKYLYLAKAAGRNRV 432 >UniRef50_A0L7H2 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7H2_MAGSM Length = 390 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 81/235 (34%), Positives = 118/235 (50%), Gaps = 15/235 (6%) Query: 334 LDHFDGVLVRVHTLSEGV---RGDFGSIS--IALTLLWALFTTMLLISWYVIRRMVSNMY 388 L +G+L V ++ + DFG+IS L L+W L LI + +S ++ Sbjct: 155 LTALEGILFMVPAMAAEIFIGSNDFGTISSDAHLGLIWLL----ALIGGVTLISAMSQLH 210 Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 S + ++ HD LT Y RG E L + + P S++ +DLD+FK+IND +G Sbjct: 211 FF-SEIIHKSSHDPLTTAYTRGTGLELMEKYFLLAERSKTPLSLMFIDLDNFKSINDAYG 269 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H GD VL AA I +S+R D R GGEEF +LP E V +R+ Sbjct: 270 HDRGDEVLKQAASAILTSMRRVDFLVRWGGEEFIAVLPNTKAEEIVYVQDRL-----ADV 324 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 L + ++ASLG++ D E L LAD+R+YLAKQ+G+NR+ DN Sbjct: 325 GLGLRPDGAPVTASLGLAELISDQAKDLESLIELADKRMYLAKQSGKNRICFGDN 379 >UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms RepID=A0L4D8_MAGSM Length = 464 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 87/263 (33%), Positives = 131/263 (49%), Gaps = 15/263 (5%) Query: 306 ELALLAQAMEHDTRGGI-RMD---SRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIA 361 E+A + M D G R+D SR + RL + + + T +E +R S++ + Sbjct: 200 EIADRMRVMRKDASGATGRLDETLSRIRTTTRLGDLESLRGALVTEAEALRSQTQSLATS 259 Query: 362 LTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAK 421 L+ A + R+ + + + ++ D LT++ NR ALF+ Sbjct: 260 LSESQAQLD--------LTRKQLQQVQDDLKKAKEESLTDPLTQVANRRALFQSLTRETA 311 Query: 422 LCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEF 481 + + P S+I +DLDHFK IND +GH GDRVL AG + LR D R GGEEF Sbjct: 312 RTRRYGEPLSLIIIDLDHFKKINDTYGHPVGDRVLKEVAGHARALLRDSDTLARYGGEEF 371 Query: 482 CVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEE--TGDYDFEQL 539 +LP +L +A E AE+IRL + + K ++ ISASLGV+ ++ + D + E Sbjct: 372 VALLPETTLPQAMEKAEQIRLSVAAMRFKL-KGESLSISASLGVAQLDDGASQDANNEAF 430 Query: 540 QSLADRRLYLAKQAGRNRVFASD 562 AD+ LY AK GRN V +D Sbjct: 431 VHRADQALYRAKSGGRNCVIQAD 453 >UniRef50_Q1K433 Ammonium transporter n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K433_DESAC Length = 606 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/169 (42%), Positives = 92/169 (54%), Gaps = 10/169 (5%) Query: 393 SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAG 452 SLQ Q + D LT++YNR EK R QT P SVI +D+DHFK IND +GH G Sbjct: 448 SLQSQVYFDPLTKVYNRRGALEKIRR-----QTPATPMSVIIIDIDHFKTINDTYGHDVG 502 Query: 453 DRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA 512 D VL A LI +R QD+ R GGEEF ++ + L EA +AE++R + Sbjct: 503 DVVLKELAELIQQLIRNQDLFARWGGEEFILLCETSILDEARRIAEKLRSSIAAYPF--- 559 Query: 513 KSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 +T ++ S GV S E D F+ L AD LY AK+ GRNRV S Sbjct: 560 -TTVNHLTCSFGVCSPERP-DQPFDALFKDADEALYRAKELGRNRVCCS 606 >UniRef50_Q7M861 SIGNAL TRANSDUCTION RESPONSE REGULATOR-CheY like receiver and GGDEF domain n=1 Tax=Wolinella succinogenes RepID=Q7M861_WOLSU Length = 501 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/198 (36%), Positives = 110/198 (55%), Gaps = 10/198 (5%) Query: 364 LLWALFTTMLLISW--YVIRRMVSNMYVLQS--SLQWQAWHDTLTRLYNRGALFEKARPL 419 +LW L +L + Y R + ++L+ +L+ ++ D LT++ NR AL E+ R Sbjct: 305 VLWLLILGILRFGYHRYEARMRLYEAWLLEKNQTLEHLSFFDHLTQIANRRALEERIRKS 364 Query: 420 AKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGE 479 + + FS++ D+D FK +ND +GH AGD VL A L S+R +D+AGR GGE Sbjct: 365 ISRFELERQSFSMVIFDIDDFKRVNDTYGHGAGDEVLKQIARLAKESIRGEDMAGRWGGE 424 Query: 480 EFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQL 539 EF + L AS++ A E+AER+R K+ A +++ S GVS E D+D L Sbjct: 425 EFVIYLHHASISSAHEIAERLRQKIARH----AFDPRFKVTCSFGVSEFREGMDFD--SL 478 Query: 540 QSLADRRLYLAKQAGRNR 557 S AD LY AK+ G+N+ Sbjct: 479 ISRADEALYEAKRQGKNQ 496 >UniRef50_B4U722 Diguanylate cyclase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U722_HYDS0 Length = 640 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/170 (37%), Positives = 92/170 (54%), Gaps = 1/170 (0%) Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 +L L+ Q+ D LT YNR + E P+ + V+ +D+DHFK IND++G Sbjct: 459 LLMEKLKEQSIKDQLTGFYNRRYIEEAIDPILNNAKRKGETTGVLMIDVDHFKEINDKYG 518 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H GD VL A I S+R D+ R GGEEF V+L ++ VAE+IR + + Sbjct: 519 HDVGDMVLKTVAQTIKESIRESDIPIRFGGEEFMVLLTNVKPGDSESVAEKIRKNMENRV 578 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + + +TTI+ + S+GVS D F Q AD LY AK++GRN+V Sbjct: 579 IKLPNNTTIKRTISIGVSEIPTDTD-KFWQAVKFADVALYKAKESGRNKV 627 >UniRef50_Q7UWZ9 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UWZ9_RHOBA Length = 875 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/169 (40%), Positives = 94/169 (55%), Gaps = 3/169 (1%) Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 L+ A D LT NR A FE+ + + P S VD+DHFK++ND +GH AGD Sbjct: 384 LEILATRDALTGCLNRRAFFERMEEMLTDYRNAGRPLSCFMVDIDHFKSVNDTYGHHAGD 443 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 VL + ++ V R GGEEFCV+LPG L EA E +ER RL + + + Sbjct: 444 EVLRKVSKVLRDLHEENQVVCRYGGEEFCVMLPGHDLDEAMEQSERTRLAV--MNIRLED 501 Query: 514 STTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 ++R++ASLGVS + G D + L + AD LY+AK+ GRN+ A D Sbjct: 502 PESLRLTASLGVSEL-KFGATDVQSLINQADSCLYVAKRGGRNQSVAFD 549 >UniRef50_Q8D5H8 FOG: GGDEF domain n=2 Tax=Vibrio vulnificus RepID=Q8D5H8_VIBVU Length = 607 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/165 (40%), Positives = 97/165 (58%), Gaps = 14/165 (8%) Query: 398 AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLS 457 A D+LT + NR AL E A ++ V +DLDHFK IND +GH AGD+VL Sbjct: 439 AQQDSLTGVLNRRALIEAANIQRRV----NDKIGVCMMDLDHFKTINDEYGHAAGDKVLK 494 Query: 458 HAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK---- 513 L+S +R QD+ GRVGGEEFC++LP A+L + +AERIRL EM++ Sbjct: 495 AFCQLVSQEIRQQDLFGRVGGEEFCLVLPDANLAQTLLIAERIRLS---AEMVLGSVLEL 551 Query: 514 STTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 ++++ S+G + + + +FE+ +AD+ LY AK GRN+V Sbjct: 552 GDDMKVTVSIGATLWQCS---NFERALFIADKALYRAKHEGRNQV 593 >UniRef50_A1VD57 Diguanylate cyclase n=3 Tax=Desulfovibrio vulgaris RepID=A1VD57_DESVV Length = 487 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 112/212 (52%), Gaps = 9/212 (4%) Query: 352 RGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNM--YVLQSSLQWQAWHDTLTRLYNR 409 + FG+I++AL AL V+R + + V+ ++ QA HD LT+L+NR Sbjct: 265 KNTFGAIAMALAETPALGKDQAQALDSVMRHLTLALRNAVVYREIKLQADHDALTQLHNR 324 Query: 410 GALFEKARPLAKLCQTHQH---PFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSS 466 + + LA+ HQ P +++ +D+DHFKA+ND +GH AGD VL A + ++ Sbjct: 325 RSFDHR---LAEEVDRHQRYGMPMTLLMLDIDHFKAVNDTYGHPAGDAVLREVAQTMRNA 381 Query: 467 LRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVS 526 R D A R GGEEFCVILP AER+R +L + + TI ++ S+G++ Sbjct: 382 CRTTDFAARYGGEEFCVILPHTDGKCGRIFAERLRKRLASSRVEV-DGKTIAVTVSIGLA 440 Query: 527 SSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + E+L AD LY AK AGRN V Sbjct: 441 TLSAAAPLSPERLVCEADGALYAAKAAGRNIV 472 >UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0DE Length = 329 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/180 (39%), Positives = 106/180 (58%), Gaps = 10/180 (5%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L L+ + D LT LYNR E+ + KLC + P + + +D+DHFK IND +GH Sbjct: 154 LNEELKTASRVDGLTGLYNRRYWQERFDEMHKLCVRREKPSTALMLDIDHFKRINDTYGH 213 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 QAGD+V+ A LI +R D+AGR GGEEF +IL +S+ +A VAERIR +L ++ + Sbjct: 214 QAGDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILNDSSVEDAKIVAERIR-QLAQRLV 272 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQS---LADRRLYLAKQAGRN--RVFASDNA 564 + + +I + SLG++ DF+ + AD+ LY AK+ GRN R++A+ A Sbjct: 273 VEHEGESISFTVSLGLAQFSP----DFKGAMAWLECADQALYEAKENGRNQYRIYAAPGA 328 >UniRef50_D0XBU8 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XBU8_VIBHA Length = 543 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/165 (40%), Positives = 95/165 (57%), Gaps = 6/165 (3%) Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 L W A +D LT L+NR AL + H H S+I +DLD+FKA+ND FGH GD Sbjct: 379 LTWLAMYDPLTNLFNRRALINQVHQELVNKAMHSHSTSLILIDLDYFKAVNDTFGHDVGD 438 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 +VL H A +S+++R QD+ R GGEEF ++L S+ E +E+I L EK L Sbjct: 439 QVLMHVADFLSANVRKQDLIARWGGEEFVILLRDTSI----EQSEQIATNLQEKMTLENF 494 Query: 514 STTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 S ++ S GV++ + F+ L + AD+ LY AK++GRN V Sbjct: 495 SPVTSMTFSAGVATL--SAGQSFDDLIANADKALYTAKKSGRNCV 537 >UniRef50_A6LJN4 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Thermosipho RepID=A6LJN4_THEM4 Length = 463 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/178 (38%), Positives = 97/178 (54%), Gaps = 10/178 (5%) Query: 386 NMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAIND 445 N Y L S + D LT++YNR + EK + L +L + P SV +D+D FK +ND Sbjct: 295 NEYNLSKS---KTEFDELTKVYNRAFIMEKLKELLQLSLRQKIPLSVAMIDIDDFKKVND 351 Query: 446 RFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLN 505 +GH GD VL A +I +LR D GR GGEEF VILPG S +A +V ERI K+ Sbjct: 352 TYGHLKGDEVLKKVAQIIRDNLRESDYVGRYGGEEFLVILPGISCNQAKKVLERILDKVR 411 Query: 506 EKEMLIAKSTTI-RISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + KS + ++ S G+ E F + AD+ LY+AK+ G+N+V+ + Sbjct: 412 NTDW---KSLGVNNVTFSAGLCCKPEKSMLGFIK---RADKNLYIAKKRGKNQVYGGE 463 >UniRef50_A0LAY9 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAY9_MAGSM Length = 220 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/177 (37%), Positives = 94/177 (53%), Gaps = 5/177 (2%) Query: 387 MYVLQSSLQW---QAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 +Y L+ +LQ A HD LT + NR E+ + + Q H P +V+ +D+DHFK I Sbjct: 38 IYSLRKALQQLEVMATHDKLTGILNRHGFQERGKYIIDQSQRHSWPLAVVMMDIDHFKKI 97 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND FGH GD VL + S+R+ D+ R+GGEEF +ILP A ++A+ IR K Sbjct: 98 NDSFGHDIGDLVLQSLGSELKKSVRSTDIVARLGGEEFALILPNTDSKHAHQIADSIRKK 157 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + + + + + SLGV+S D L + AD LY AK GRNRV + Sbjct: 158 IETSRLSLPDGKFLTYTLSLGVTSGLGIDKMDL--LLNQADNALYRAKGTGRNRVVS 212 >UniRef50_O66623 Putative uncharacterized protein n=1 Tax=Aquifex aeolicus RepID=O66623_AQUAE Length = 338 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 1/158 (0%) Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D LT L NR L R + +L + PFS+ VD+D+FK IND +GH GD+VL A Sbjct: 180 DPLTGLLNRRVLPYILRDVLELSLYTETPFSIAMVDIDNFKKINDTYGHLFGDKVLKEVA 239 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRIS 520 +I +LR D R GGEEF +++P L +A + E+IR K E + + IR++ Sbjct: 240 KIIKKNLRRSDYVFRYGGEEFLILMPSTELKDAVRILEKIR-KEVENTPICWQGKEIRVT 298 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 S+GV S G E+ AD +LYLAK+ G+NRV Sbjct: 299 ISVGVCSDVYNGLKSPEEYIKCADEKLYLAKRTGKNRV 336 >UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMG8_DESAA Length = 417 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 112/206 (54%), Gaps = 6/206 (2%) Query: 360 IALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPL 419 IA L A+ ++L + W ++ R+ + +++ + D LTRL+NR + Sbjct: 209 IASGLTAAISLSLLSMIWILVSRLARRLTKAYETIEVMSITDELTRLHNRRHFETRLAEE 268 Query: 420 AKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGE 479 + P S++ +D+DHFK +ND +GHQAGD VL+ A L+ ++R DV R GGE Sbjct: 269 ISRSLRYGSPMSLMILDIDHFKRVNDNYGHQAGDWVLTQFATLLKDNVRKADVPARWGGE 328 Query: 480 EFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVS-----SSEETGDY 534 EF VIL +++++A AE++R + E I +I ++ S+GV+ S +E G Sbjct: 329 EFVVILTESTISQARMAAEKVRRNVESAEFNIPDGRSIPVTVSVGVASLDMISGDEMGS- 387 Query: 535 DFEQLQSLADRRLYLAKQAGRNRVFA 560 + + L AD LY AKQ GRNR A Sbjct: 388 EADVLVKTADDALYRAKQEGRNRTVA 413 >UniRef50_B9M798 Diguanylate cyclase n=1 Tax=Geobacter sp. FRC-32 RepID=B9M798_GEOSF Length = 418 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/196 (33%), Positives = 110/196 (56%), Gaps = 3/196 (1%) Query: 364 LLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLC 423 +L + + + + + V+R++ + + + L+ A D LT ++NR + KA A Sbjct: 220 MLLLVISAVHVGALVVVRKLTGQLKKVHAELEQMAIKDELTGIFNRRHILSKANFKAISR 279 Query: 424 QTH-QHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFC 482 Q + V+ +D+D+FK++ND +GH GD VL + ++ S RA D+AGR+GGEEF Sbjct: 280 QREGELTIGVLNMDVDYFKSVNDTYGHLVGDEVLKEISRRLTDSCRASDLAGRIGGEEFI 339 Query: 483 VILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSL 542 V+LP ++TE +AERI + EK + + + ++ S+GV+ + G+ D Q Sbjct: 340 VLLPDTAMTEIIAIAERIHRSVGEKPFHVEQH-DLAVTISVGVACT-LPGEKDLSQAIRR 397 Query: 543 ADRRLYLAKQAGRNRV 558 AD LY AK GRNR+ Sbjct: 398 ADTALYRAKNMGRNRI 413 >UniRef50_A8UY37 Predicted signal transduction protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY37_9AQUI Length = 869 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/164 (41%), Positives = 91/164 (55%), Gaps = 1/164 (0%) Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 L A D LT + NR L +L + + S+I VD+D+FK IND +GHQ GD Sbjct: 450 LTHMATTDPLTGVSNRRVLEHDIAKFGRLVKRYNKSMSLIMVDIDNFKGINDTYGHQVGD 509 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 VL A LI S+R D R GGEEF V+ P A E+AERIR K+ E + I Sbjct: 510 VVLKKVAKLIEESVRETDTVYRYGGEEFAVLCPETDKLGAYELAERIREKIRETKFWIDT 569 Query: 514 STTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 S I I+ SLGV+S E D + +++ ++AD LY AK G++R Sbjct: 570 SRVIYITVSLGVASVPEDTD-NPDEILAIADISLYRAKSEGKDR 612 >UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VTQ5_9CYAN Length = 1341 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/174 (39%), Positives = 97/174 (55%), Gaps = 1/174 (0%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L+ +L Q+ D LT L+NR + E Q HQ P +I +D+DHFK ND FGH Sbjct: 1169 LRETLSQQSIRDALTGLFNRRYMEESLEREIHRAQRHQRPMGIIMLDIDHFKHFNDTFGH 1228 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 +AGD VL + S+RA D+A R GGEE +ILP ASL + + AE+IR + ++ Sbjct: 1229 EAGDAVLRELGIFLQRSIRASDIACRYGGEELMLILPDASLADTKQRAEQIRHDVKGLQI 1288 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 I+ S+GV++ E G ++L + ADR LY AK GR+RV + + Sbjct: 1289 EYHHKLLDAIAISVGVAAFAEHGS-TAQELIAAADRALYQAKAQGRDRVVTASS 1341 >UniRef50_C7I354 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thiomonas intermedia K12 RepID=C7I354_THIIN Length = 752 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/170 (39%), Positives = 98/170 (57%), Gaps = 2/170 (1%) Query: 391 QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ 450 +S L+ A+ DTLT + NR +A + Q PF V+ +D+D FK INDRFGHQ Sbjct: 572 ESELRNLAYTDTLTGIPNRRYFLARAALELRRAQREGSPFVVLALDIDRFKQINDRFGHQ 631 Query: 451 AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEML 510 GD V+ A LR D+ GR+GG+EF ++LP + A +VA+R+RL + E L Sbjct: 632 VGDAVIRCFAQTCMQQLRGPDLCGRLGGDEFAILLPQTTRQVAFDVAQRLRLSIQEASCL 691 Query: 511 IAKST-TIRISASLGVSSSEETGD-YDFEQLQSLADRRLYLAKQAGRNRV 558 + + + ++ S+G++ T D ++L AD+ LY AKQAGRNRV Sbjct: 692 PSSAPDGLTLTTSIGIAEFLPTSTLMDADELLDRADQALYRAKQAGRNRV 741 >UniRef50_A0YPS9 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YPS9_9CYAN Length = 965 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/176 (35%), Positives = 105/176 (59%), Gaps = 2/176 (1%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 +S + ++ L+ D+LT++Y+R L A + + Q + D+DHFK I Sbjct: 786 ISELKNAETKLREMVEFDSLTQVYSRQYLLGLAERMFMRIKQEQTSLLCMMFDIDHFKLI 845 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND++GH+AGD L + ++S +LR+ D+ GR+GGEEF ++P SL ++AERIRL+ Sbjct: 846 NDQYGHKAGDIALIAFSEIVSKNLRSNDIFGRLGGEEFLAVVPEISLEAGKKLAERIRLE 905 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDY-DFEQLQSLADRRLYLAKQAGRNRV 558 + EK + + I ++ S+G+S + + F++L L+D+ LY AK +GRNRV Sbjct: 906 V-EKTPITVGADCITMTVSIGISMYKNNKNLATFDELIELSDKALYTAKNSGRNRV 960 >UniRef50_Q4USH9 Sensor histidine kinase n=3 Tax=Xanthomonas campestris pv. campestris RepID=Q4USH9_XANC8 Length = 578 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/175 (42%), Positives = 99/175 (56%), Gaps = 2/175 (1%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 +SN+ L+ SL+ Q+ D LT LYNR L E C P SV+ +D+DHFK Sbjct: 386 LSNLR-LRESLRRQSIRDALTGLYNRRYLEEALSHELARCARRDLPLSVLMLDVDHFKQF 444 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND GH GD +L+ L+ + LRA+DVA R GGEEF VILP EA VAE+IR Sbjct: 445 NDGQGHAGGDLLLAAVGELLLTRLRAEDVACRYGGEEFTVILPETDGEEAMRVAEQIRGH 504 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + + + R++AS+GV+S G+ +Q AD LY+AK+ GRNRV Sbjct: 505 IAALAVSDGQRALPRVTASIGVASFPADGELGSALIQK-ADAALYVAKRQGRNRV 558 >UniRef50_A8MM09 Diguanylate cyclase n=2 Tax=Clostridiaceae RepID=A8MM09_ALKOO Length = 356 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/167 (42%), Positives = 97/167 (58%), Gaps = 5/167 (2%) Query: 394 LQWQAWHDTLTRLYNRGALFEKA--RPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQA 451 L+ +A D LT LYN FEK A + Q ++ S++ +D+D FK +ND FGH + Sbjct: 192 LKEEATRDFLTGLYNVRE-FEKVTNELFATIVQRKEN-LSLLMIDIDFFKKVNDTFGHSS 249 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GD VL + +I+SS R+ D+ R GGEEF VIL G A E+AERIR + + +I Sbjct: 250 GDLVLKQLSTIITSSCRSFDIVSRQGGEEFTVILLGCDHKTALEIAERIRKNVEDHLFII 309 Query: 512 AKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 K+ I+I+ S+GVSS E + D L AD LY AK+ GRN V Sbjct: 310 DKNEEIKITVSIGVSSYPEVTN-DPHHLLHEADDALYFAKRNGRNLV 355 >UniRef50_C5BMJ7 GGDEF domain protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BMJ7_TERTT Length = 566 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/158 (38%), Positives = 91/158 (57%), Gaps = 3/158 (1%) Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D LT+L RG F++ Q +++++D+D+FK IND FGH AGD V+ H A Sbjct: 408 DHLTQLATRGYFFQRLNEEINRALNEQSSLALLELDIDNFKNINDSFGHPAGDAVIQHMA 467 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRIS 520 + +R+ D+ GR+GGEEF + LP + + A E+A +R + E L S TIR + Sbjct: 468 AICRECVRSNDIIGRIGGEEFAIGLPNCTKSAALEIANTLRRRC-ANEGLTYGSKTIRFT 526 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 S+GV+ G + + L + D+ LY AK+AGRNRV Sbjct: 527 CSIGVTLL--NGRDNIQDLLGVVDKALYAAKKAGRNRV 562 >UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SA57_CHRVI Length = 434 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 1/179 (0%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 I R +++ L+ L+ D LT+L+NR F A + + HP ++ +D+DH Sbjct: 243 IIRDITDSKRLEEDLRQLTRLDPLTQLFNRRYFFTLAEQEYQRFLRYHHPMALCMIDIDH 302 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK++NDR+GH GD VL A + +LR D+ R GGEEF ++LP L A ER Sbjct: 303 FKSVNDRYGHLVGDTVLCIVAQTLHDNLRQVDILARYGGEEFVILLPETDLQTACASTER 362 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +R+ + E+ + S + ++ SLGV + + E+L AD+ LY AKQAGRNRV Sbjct: 363 LRVAVAERR-IETPSGPVSVTLSLGVVAIADGPAMTLERLLDAADQMLYRAKQAGRNRV 420 >UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgaris RepID=B8DLV9_DESVM Length = 381 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/188 (38%), Positives = 100/188 (53%), Gaps = 3/188 (1%) Query: 375 ISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQ 434 ++ Y R + +L L A D LT L NR AL E+ + P S+ Sbjct: 180 LAEYTRRHTQRLLILLTQQLAESARTDELTGLANRRALCERLEYEQVRARRTGRPLSIAI 239 Query: 435 VDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAA 494 D+DHFK++ND +GHQ GD VL AGL+ +LR QD R GGEEF ++LP AA Sbjct: 240 CDIDHFKSVNDCYGHQCGDLVLQSVAGLLHDNLRHQDTICRWGGEEFLLLLPETDEAGAA 299 Query: 495 EVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAG 554 +AE++R L E + ++ S GV + GD D+ + AD++LYLAK+ G Sbjct: 300 RLAEKLR-SLVEAMEYSYHGIPVSVTLSFGVHTCGPEGDIDYHIRK--ADQKLYLAKEQG 356 Query: 555 RNRVFASD 562 RNRVFA + Sbjct: 357 RNRVFAGE 364 >UniRef50_B5JWA7 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JWA7_9GAMM Length = 394 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 76/203 (37%), Positives = 113/203 (55%), Gaps = 14/203 (6%) Query: 360 IALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKA-RP 418 +AL L ++ +L + +V R N+Y S++ D LTRL NR + ++ Sbjct: 195 MALILSALIYLCLLAVGRWVERE---NLYREMSTI------DGLTRLTNRSSFIKRGDEE 245 Query: 419 LAKLCQTHQHP---FSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGR 475 LA+L + P + I +DLDHFK+IND +GH AGD VL A+ ++ + R D GR Sbjct: 246 LARLQRLPSDPSPTLACIMLDLDHFKSINDTWGHHAGDEVLVVASKIMMDNARQYDEVGR 305 Query: 476 VGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYD 535 GGEEF ++LP L A ++AER+R K++E + + I+ +ASLGV+S G + Sbjct: 306 YGGEEFAILLPSVDLALAEKIAERLRKKISEAVVKV-DGKAIQFTASLGVASFPSEGLEN 364 Query: 536 FEQLQSLADRRLYLAKQAGRNRV 558 L AD LY AK+ GRN+V Sbjct: 365 MNDLLKAADAALYEAKEGGRNQV 387 >UniRef50_B9L5Q2 Diguanylate cyclase n=2 Tax=Nautilia profundicola AmH RepID=B9L5Q2_NAUPA Length = 463 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 65/193 (33%), Positives = 104/193 (53%), Gaps = 9/193 (4%) Query: 374 LISWYV-IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSV 432 + W + +++ + + L+ L+ +++D+LT +YNR + + +L + ++ P S+ Sbjct: 278 FVYWIIRLKKEIKKRHKLEEELKKISFYDSLTDIYNRYKIDLSLKSQIELAKKYKIPLSI 337 Query: 433 IQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTE 492 I D+D FK IND +GH+ GD VL + LI ++R D+ GR GGEEF +ILP LT Sbjct: 338 IFFDIDDFKKINDTYGHKVGDEVLIELSKLIKRNIRQTDIFGRWGGEEFIIILPNTDLTT 397 Query: 493 AAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYD-FEQLQSLADRRLYLAK 551 A +A +++ + E I K ++ S GV+ E D D L AD LY AK Sbjct: 398 ATHIANKLKKAIEEHSFPIIK----HLTCSFGVT---ELKDNDSLNTLTVRADSFLYEAK 450 Query: 552 QAGRNRVFASDNA 564 G+NRV + N Sbjct: 451 NKGKNRVISDLNV 463 >UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0YVN1_9CYAN Length = 1252 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 65/174 (37%), Positives = 96/174 (55%), Gaps = 1/174 (0%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 LQ + Q+ D LT L+NR L E + + + ++ +D+DHFK ND+FGH Sbjct: 1078 LQEKFKAQSMRDALTGLFNRRYLEESLEQEIHRARRNHYSVGIVMIDIDHFKRFNDQFGH 1137 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 AGD VL A L+ S+R+ D+A R GGEE +ILP ASL++ +E+IR + ++ Sbjct: 1138 DAGDEVLKTVARLLQGSIRSSDIACRYGGEELTLILPEASLSDTQARSEQIRYMIEHLQL 1197 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 + I+AS GV+ E G+ E + +AD LY AK GRNRV + + Sbjct: 1198 HYENQSLGSITASFGVACFPEHGE-TLEAVLRIADTALYQAKALGRNRVVCATD 1250 >UniRef50_Q7MRL2 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MRL2_WOLSU Length = 480 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 68/164 (41%), Positives = 97/164 (59%), Gaps = 3/164 (1%) Query: 395 QWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDR 454 Q +A D+LT ++ R L E L ++ +SV D+D FK IND++GH+AGDR Sbjct: 315 QEEASIDSLTGVHTRRFLEESLSRFEALFLRYESRYSVAFFDIDFFKKINDKYGHEAGDR 374 Query: 455 VLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKS 514 VL+ L+ S+R +D+A R GGEEF VILP +L EA AERIR L E+ + + + Sbjct: 375 VLATFGRLLKQSVRQEDIAARYGGEEFIVILPEMNLVEAWRFAERIR-ALVERSVFVYQD 433 Query: 515 TTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 I++S S G++ E D + L AD RLY AK+ GRN++ Sbjct: 434 MRIKVSVSGGIAERSECEDR--KALIKFADARLYEAKEGGRNQI 475 >UniRef50_A5W338 Diguanylate cyclase n=3 Tax=Pseudomonas putida RepID=A5W338_PSEP1 Length = 381 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 95/163 (58%), Gaps = 15/163 (9%) Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D LT L NR A F+ A C+ +V+ +D+DHFK IND FGH AGD+VL Sbjct: 215 DELTGLNNRRAFFDNASAQHAQCRDAGKFMAVLMLDVDHFKQINDTFGHAAGDQVLQRIG 274 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR-----LKLNEKEMLIAKST 515 IS+SLR D+AGR+GGEEF ++LP A EVAER+R L++N++ Sbjct: 275 AAISASLRDNDIAGRLGGEEFAILLPNTPPDTAIEVAERLRALIAKLRVNDEH------- 327 Query: 516 TIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 ++AS+G++ ++ + L S AD +YL+K +GRNRV Sbjct: 328 --PVTASIGLAFAKAPAT-ELGALLSSADSAMYLSKVSGRNRV 367 >UniRef50_Q3JE99 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Nitrosococcus oceani RepID=Q3JE99_NITOC Length = 661 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/179 (39%), Positives = 104/179 (58%), Gaps = 2/179 (1%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 +R ++++ V L A D+LT L NR E+ + +Q PFS + +DLD Sbjct: 455 VRGYLADLAVANRRLGQMAMTDSLTGLPNRRYAMERMEQAWAEYERNQTPFSCLVMDLDF 514 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK +ND++GH+ GD VL A + S R+ D+ R+GGEEF V+ P TEA +VAER Sbjct: 515 FKRVNDQYGHEIGDSVLLEIANVFRGSARSSDIICRLGGEEFLVVCPHTVATEAFQVAER 574 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +R + E + ST++ +S S+G+++S E G + L LAD+ LY AK+ GRNRV Sbjct: 575 LRRAVEEHSWTMLDSTSV-LSVSIGLAASSE-GMQHWNDLYRLADQALYQAKRNGRNRV 631 >UniRef50_A6T2S6 Putative uncharacterized protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T2S6_JANMA Length = 352 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 69/174 (39%), Positives = 101/174 (58%), Gaps = 8/174 (4%) Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSV--IQVDLDHFKAINDRFGHQA 451 LQ D LT + NR + + R L ++ +T +H +++ + +DLDHFK +ND FGHQ Sbjct: 180 LQHIGLTDPLTGVNNRR--YVERRLLEEVGRTQRHGYALSGMYIDLDHFKKVNDNFGHQG 237 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GD VL A I + LR D GR GGEEF V+L A L A VAERIR ++E+ +++ Sbjct: 238 GDEVLCEVANRIKAELRLSDALGRFGGEEFVVLLIDAPLDAALVVAERIRASVSERPIVL 297 Query: 512 AKSTTIRISASLGVSSSEETGDYD----FEQLQSLADRRLYLAKQAGRNRVFAS 561 + +R + S+GV+S D +QL + AD LY AK+ GRN+V ++ Sbjct: 298 SSGEELRATVSIGVASLNTADRQDSAAVAQQLLAKADLALYQAKKEGRNKVISA 351 >UniRef50_A0KFF7 GGDEF family protein n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KFF7_AERHH Length = 301 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 101/189 (53%), Gaps = 23/189 (12%) Query: 375 ISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQ 434 ++W + R ++ Y LQ L+ Q+ D LT LYNR FE R + + P +++ Sbjct: 120 VAW--VTRNITRQYELQQRLKLQSETDQLTGLYNRRYFFEHCRQR----RAGEAPCALVM 173 Query: 435 VDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAA 494 +D+DHFK INDRFGHQ GDR L +++ LRA D+ R GGEEF ++LPG S + Sbjct: 174 LDIDHFKQINDRFGHQQGDRALQRFCACVAAQLRADDMFVRSGGEEFLILLPGMSEPDLL 233 Query: 495 EVAERIR-----LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYL 549 +AERIR L + ++ TT+ V EE Q + AD LY Sbjct: 234 ALAERIRAAVAALPADPAAFTVSLGTTL-------VRPGEE-----INQALARADEWLYR 281 Query: 550 AKQAGRNRV 558 AK+AGRNRV Sbjct: 282 AKRAGRNRV 290 >UniRef50_UPI0001850EBC integral membrane sensor signal transduction histidine kinase n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850EBC Length = 721 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 68/178 (38%), Positives = 99/178 (55%), Gaps = 3/178 (1%) Query: 383 MVSNMYVLQS--SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHF 440 VS M ++S SL+ A D LT LYNR FEKA + ++ P S++ +D+D+F Sbjct: 539 FVSKMDQIESYESLKRSAMFDHLTNLYNRKFFFEKAEEIYRVSNQLDLPLSLLLIDMDYF 598 Query: 441 KAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERI 500 K IND FGH GD VL + + ++ + R + + GR GGEEF IL A E+ AE + Sbjct: 599 KKINDTFGHMKGDEVLMYVSSKLNEAFRDKGIIGRYGGEEFIAILQNADEIESYTFAENL 658 Query: 501 RLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 R+ + + + + TI +S S+G+S+ ++ QL AD LY AK GRNRV Sbjct: 659 RMTILDHPFQLPEGITIPLSLSIGISTGIKSTK-TISQLVQEADESLYYAKNNGRNRV 715 >UniRef50_Q1QZQ8 Diguanylate cyclase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZQ8_CHRSD Length = 413 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 7/206 (3%) Query: 357 SISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKA 416 S ++A LLW M ++ V+ + L+ + + +A HD LT NR A+ Sbjct: 180 SPAMATGLLWINLAMMGMLFGGVLMGLEGVTERLERTYRREALHDMLTGALNRRAILS-- 237 Query: 417 RPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRV 476 +A+ + Q PF+++ +D+DHFK ND GH GD L H + LR D+ GR Sbjct: 238 --IAERWRRAQCPFALVLLDVDHFKRFNDLHGHATGDAALCHLVNCLQQGLREGDMLGRY 295 Query: 477 GGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDF 536 GGEEF ++LPG + A VAERI + E+ + + ++ ++ S G+++ +E Sbjct: 296 GGEEFMLLLPGMTRGAAMTVAERIAALVREQPLAL-PDKSLGMTVSQGIAAEDEAA--TL 352 Query: 537 EQLQSLADRRLYLAKQAGRNRVFASD 562 ++ LADRRLY AK AGR+RV A D Sbjct: 353 GEMIELADRRLYAAKHAGRDRVMAWD 378 >UniRef50_C6CBV2 Diguanylate cyclase n=9 Tax=Enterobacteriaceae RepID=C6CBV2_DICDC Length = 241 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 69/179 (38%), Positives = 101/179 (56%), Gaps = 9/179 (5%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 + R+ + ++ L L+++A HD LT ++NR A+ + L L H+ ++I +D+DH Sbjct: 63 LTRLNAQLHKLAVELEYKATHDPLTDVFNRSAIID----LIDLALEHEQA-ALIVLDIDH 117 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK IND +GH GD V+ G I L+ + GRVGGEEF ++L G SL +A E+AE Sbjct: 118 FKKINDTYGHPTGDAVICALIGRIRDVLQGKGSIGRVGGEEFTILLDGYSLMQAVELAEH 177 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 I LN + ++AS G+S + +D +L S AD LY AK AGRNRV Sbjct: 178 IHASLNHTPL--DALPEYLVTASFGISWAPPQAHFD--ELYSAADIALYQAKNAGRNRV 232 >UniRef50_A1AK83 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AK83_PELPD Length = 304 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 69/168 (41%), Positives = 95/168 (56%), Gaps = 3/168 (1%) Query: 391 QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ 450 + +LQ A D LT + NR + + H P S+I D+DHFK++ND FGH Sbjct: 135 EEALQCAARTDHLTGIANRWEFINRFNTEKGRAERHGTPLSIIIADIDHFKSVNDTFGHN 194 Query: 451 AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEML 510 AGDRVL A ISSS+R +D GR GGEEF ++LP +L AA VAE++R ++E + Sbjct: 195 AGDRVLRSVANAISSSIRVEDACGRWGGEEFMLLLPDTNLDAAARVAEKLRQAVSELS-I 253 Query: 511 IAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + +I ++ S+GV D E +Q + D LY AK GRNRV Sbjct: 254 PWEGESIAVTLSMGVGQFRPGMTLD-ECIQPV-DHALYRAKTGGRNRV 299 >UniRef50_B5SJ67 Signal transduction protein ggdef domain n=4 Tax=Ralstonia solanacearum RepID=B5SJ67_RALSO Length = 532 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 73/190 (38%), Positives = 103/190 (54%), Gaps = 17/190 (8%) Query: 376 SWYV----IRRMVSNMYVLQSS----LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQ 427 SWY+ ++R + L SS L +A D LT LYNR + + R LA Q Sbjct: 326 SWYIEAHRLKRALLRGTRLSSSRMARLNHEALTDPLTGLYNRRGVADALRLLAGRHQ--- 382 Query: 428 HPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPG 487 PFS + +D+DHFK INDR GH GD+VL H A LI R D+ GR+GGEEF ++LP Sbjct: 383 -PFSAVTLDVDHFKRINDRDGHDVGDQVLKHIAALIREQARHDDITGRIGGEEFILLLPD 441 Query: 488 ASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRL 547 A+ A + AER+R + + + T+ + + +SEE + + L+D L Sbjct: 442 ATPEGAFKTAERLRRAVEARPNPTGQVVTVSLGVADYPGASEEV-----DAVLKLSDLAL 496 Query: 548 YLAKQAGRNR 557 Y AK++GRNR Sbjct: 497 YQAKRSGRNR 506 >UniRef50_A8ADN2 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8ADN2_CITK8 Length = 520 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 79/195 (40%), Positives = 108/195 (55%), Gaps = 19/195 (9%) Query: 376 SWYV----IRR-MVSNMYVLQSSLQW---QAWHDTLTRLYNRGALFEKARPLAKLCQTHQ 427 SWY+ +RR ++ M +++ ++W QA D LT L NR A A L + Q Sbjct: 336 SWYIEASRLRRALLQGMELIREKMKWLNDQASTDPLTGLVNRRA----AEKLLAEYEHQQ 391 Query: 428 HPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPG 487 F+VI +D+D FKA+ND FGH GD L A L+ S R D A R+GGEEF + P Sbjct: 392 RQFAVISLDIDRFKAVNDTFGHDIGDVTLKALAQLLKRSCRKNDTACRMGGEEFMMFFPE 451 Query: 488 ASLTEAAEVAERIRLKLNEKEMLIAKSTTI-RISASLGVSSSEETGDYDFEQLQSLADRR 546 S+ AA++AER+R KE+ AK T+ I+ SLGV+ D + L+ AD Sbjct: 452 TSVEAAADIAERLR-----KEVAAAKIETVGHITISLGVTVWPSGVDSVSQALKR-ADEL 505 Query: 547 LYLAKQAGRNRVFAS 561 +Y AKQAGRN+V A Sbjct: 506 MYQAKQAGRNQVVAG 520 >UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU2_ALHEH Length = 686 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 68/171 (39%), Positives = 95/171 (55%), Gaps = 6/171 (3%) Query: 391 QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ 450 + +L+++A HD LT LYNR +L HP SV+ DLDHFK +ND GH Sbjct: 519 EQALRYRASHDGLTGLYNRRHTQRALERELRLAARTGHPVSVVLFDLDHFKRVNDTHGHN 578 Query: 451 AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEML 510 AGD+VL AGL++ +R D+ GR GGEEF ++LPG T A ++AE +R + E Sbjct: 579 AGDQVLRQLAGLVTERVRDTDIVGRWGGEEFLLVLPGTDETGAGQLAEVLRAYVAEARFP 638 Query: 511 IAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 I T IS + ++E D F+++ D+ LY AK GRNR A+ Sbjct: 639 IPDPVT--ISLGYAQAGADEGADALFKRV----DQALYAAKANGRNRAQAA 683 >UniRef50_D0J5H9 Diguanylate cyclase n=2 Tax=Comamonas testosteroni RepID=D0J5H9_COMTE Length = 398 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 78/221 (35%), Positives = 128/221 (57%), Gaps = 13/221 (5%) Query: 341 LVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWH 400 L+ VH + E R + ++ A+ LL+A+ W+ + + ++ + ++L+ + Sbjct: 178 LLPVHEVQELTRSGYWLLTQAIALLFAM--------WFAVGLLACSVRDVMTTLREERNR 229 Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D+LTRL NR A E A ++L P++V+ VD+DHFK IND +GH AGD+VL A Sbjct: 230 DSLTRLLNRRAFMEAAE--SRLADQRLVPWAVVAVDIDHFKYINDNWGHAAGDQVLQQLA 287 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRIS 520 L++ +R D+ R GGEEF ++L L EA + ER+R +L + ++L + +R++ Sbjct: 288 QLLTQQVRDCDLVARFGGEEFVLLLSRVQLFEAQAIVERVRDRL-QSQVLGGLAAQLRVT 346 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 AS G+++ DFEQ + AD LY AK+AGR+ V +S Sbjct: 347 ASFGIAALSSA--QDFEQALARADALLYQAKKAGRDCVMSS 385 >UniRef50_B8KPY0 Sensory box/ggdef domain protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPY0_9GAMM Length = 209 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 67/178 (37%), Positives = 99/178 (55%), Gaps = 2/178 (1%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 +S+ +++ L+ HD LT + NR L ++ + + Q P S++ VD+D FKA+ Sbjct: 34 ISDRKLMEDELRELTLHDPLTGVANRRLLQDEGQKELQRSQRTGAPLSMMAVDIDFFKAV 93 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 NDR+GH GD L A L S R D+ R GGEEF V+LP SL +A +AER+R Sbjct: 94 NDRYGHHIGDLALKKVAELCQSVTREYDLVSRTGGEEFTVLLPHTSLEQAHALAERMRCA 153 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + E + I+++ S+GV++ + E+L LAD LY AK AGRNRV + Sbjct: 154 IAES-CAVLNEHEIKLTVSIGVAAL-LSAHQSIEELSQLADDALYRAKNAGRNRVITA 209 >UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q4KDW8_PSEF5 Length = 315 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 69/163 (42%), Positives = 94/163 (57%), Gaps = 15/163 (9%) Query: 401 DTLTRLYNRGAL-----FEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRV 455 D LT+LYNRG FE +R H +++ +D+DHFK+INDR GHQAGD V Sbjct: 158 DHLTQLYNRGHWEQRLQFEYSR--------HGSSIALLMLDIDHFKSINDRHGHQAGDAV 209 Query: 456 LSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKST 515 + + LI +R DVAGR GGEEF ++LP L A +AER+R + E+E +I Sbjct: 210 IKRVSELIHQHVRDSDVAGRYGGEEFAILLPHTDLAGARTLAERLRQSVEEQE-VIHNGQ 268 Query: 516 TIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 I + SLG++ + D L AD+ LY +K+AGRNRV Sbjct: 269 AIAFTISLGIACLDRPAR-DHRCLIEWADQALYASKRAGRNRV 310 >UniRef50_Q2B8D4 GGDEF n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B8D4_9BACI Length = 454 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 68/178 (38%), Positives = 100/178 (56%), Gaps = 4/178 (2%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 ++ ++Q L+ A D LT++YNR +++ + S+I D+DHFK I Sbjct: 266 ITEKILIQEQLKELASIDGLTQVYNRTYFMKQSLESLGGISPNGGDVSLIMFDIDHFKKI 325 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND +GH+ GD VLSH A + S+RA DV GR GGEEF ++LP S EA ++AE IRL Sbjct: 326 NDEYGHETGDLVLSHVARVAKESIRAADVIGRYGGEEFIILLPDTSFDEAYDLAEAIRLN 385 Query: 504 LNEKEMLIAKSTTIRISASLGVSSS---EETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 ++E+ + + + + SLGVS + D + L AD+ LY AK+ GRN V Sbjct: 386 VSEQYTKLGQ-VNVHATLSLGVSHMFLFPQVLDDPIQFLMREADQALYAAKRNGRNNV 442 >UniRef50_C8S5Q5 Diguanylate cyclase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5Q5_9RHOB Length = 551 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 66/173 (38%), Positives = 102/173 (58%), Gaps = 3/173 (1%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 ++ L QA D LT L+NR L ++ ++ + F+++ +D+DHFKA ND +GH Sbjct: 353 MRDELHHQATRDVLTGLFNRRYLMDRLH--RRIERQADESFAIMSIDVDHFKAFNDAYGH 410 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 +AGD VL ++S+S A ++A R+GGEEF ++LP + +A E AE +R+ +NE + Sbjct: 411 EAGDEVLRVLGEMLSASCNAPEIACRMGGEEFILVLPNLAKDQAVERAEALRIAVNELCV 470 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 A +T IS S+GV+ GD + L+ AD LY AK AGRN V ++ Sbjct: 471 HHAGNTLPPISVSVGVALYSGIGDASLDVLRQ-ADEALYAAKSAGRNHVVVAE 522 >UniRef50_B4B5Q6 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B5Q6_9CHRO Length = 813 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 63/165 (38%), Positives = 96/165 (58%), Gaps = 1/165 (0%) Query: 400 HDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHA 459 +D LT + R E L Q PF + +DLDHFK +ND++GH+ GD VLS+ Sbjct: 646 YDELTGVSLRRKALEDLTRAIHLAQRQGQPFCLAILDLDHFKRVNDQYGHETGDLVLSYF 705 Query: 460 AGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRI 519 L++ S R+QD+ GR GGEEF V + G + E ++ E I KLN + A T+ R+ Sbjct: 706 GQLLNKSFRSQDIIGRWGGEEFVVGMIGMTKLEGSKRLENILEKLNNYLFVAANGTSFRV 765 Query: 520 SASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 + S G++ E G+ + + L + AD+ LY AK+AGR R+ A++ + Sbjct: 766 TFSGGIAQLRENGN-ELQMLYTAADQALYQAKEAGRRRIIAAEKS 809 >UniRef50_B6JIE5 Cellulose synthesis regulatory protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JIE5_OLICO Length = 397 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 73/169 (43%), Positives = 99/169 (58%), Gaps = 10/169 (5%) Query: 395 QWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDR 454 Q +A HD+LT L NR ALF+K+ Q P +V+ D+DHFKA+NDR GHQ GD Sbjct: 217 QREAEHDSLTGLLNRRALFDKS-------QRVAAPVAVVVFDVDHFKAVNDRHGHQVGDT 269 Query: 455 VLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKS 514 VL A L++++ R D+A R+GGEEF ++L G +A +VAER+R L + I+ S Sbjct: 270 VLQTFASLLAANTREGDLAARLGGEEFVIVLSGTMAAQAMQVAERVRESLAGQR-FISSS 328 Query: 515 TTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 ++ S GV+ E G+ D L AD LY AK GRNRV S + Sbjct: 329 GDFGVTVSAGVAC--ENGEVDIIALLRRADFALYDAKHTGRNRVLLSSS 375 >UniRef50_D1RF31 Response regulator diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RF31_LEGLO Length = 481 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 60/167 (35%), Positives = 94/167 (56%), Gaps = 3/167 (1%) Query: 392 SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQA 451 S L + D+LT L N ++ + + P S + +D+D+FK IND +GH Sbjct: 308 SILNYYMTTDSLTGLLNHSSVLNRLNIEITRAKQQDSPLSFVMIDIDNFKLINDTYGHPF 367 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GD V+ A ++ SLR QD+ GR GGEEF +ILPGA+L + ++ +RL+ + + Sbjct: 368 GDVVIKKLASMLMMSLRNQDIIGRYGGEEFVLILPGANLENSQKICNNLRLQFSNHTFTV 427 Query: 512 AKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + ++ S+G+SS T YDF + + AD+ LY AKQ G+N+V Sbjct: 428 -NDHQVHVTISIGISSL--THSYDFNDIVNYADQALYKAKQNGKNQV 471 >UniRef50_A4VQF4 GGDEF domain protein n=3 Tax=Proteobacteria RepID=A4VQF4_PSEU5 Length = 466 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 76/193 (39%), Positives = 104/193 (53%), Gaps = 14/193 (7%) Query: 368 LFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQ 427 +F+ MLL S + IRR+ L L+ ++ D+LT L NR AL + + + ++ Sbjct: 276 VFSAMLLTSLFWIRRLRR----LNDQLRIKSQTDSLTGLANRAALDRRFATALEQARRYR 331 Query: 428 HPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPG 487 P S++ +D+DHFK IND FGHQ GDRVL A L+ LR D GR GGEEF V+ P Sbjct: 332 RPLSIVMLDIDHFKRINDDFGHQMGDRVLRDFAALLDDCLRGSDAVGRWGGEEFLVLCPE 391 Query: 488 ASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVS--SSEETGDYDFEQLQSLADR 545 S +A + AER L E+ +T + + S GV+ S +T D L AD Sbjct: 392 TSGPQAVQFAER----LCEQARAFPFATGVSQTLSAGVAELSPSDTPD----SLLRRADA 443 Query: 546 RLYLAKQAGRNRV 558 LY AK GR+RV Sbjct: 444 ALYRAKHEGRDRV 456 >UniRef50_C4XS30 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XS30_DESMR Length = 498 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 66/170 (38%), Positives = 97/170 (57%), Gaps = 1/170 (0%) Query: 392 SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQA 451 + ++ +A HD LTR++NR A E+ + Q ++H S++ VD+DHFK INDR+GH Sbjct: 313 NQVKIRADHDGLTRIHNRRAFDERLIDELRRHQRYRHAMSLLMVDIDHFKGINDRYGHLV 372 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GD VL ++S +LR+ D R GGEEF VILP + +A +AER+R + E + Sbjct: 373 GDHVLREVGSILSETLRSTDFTARYGGEEFVVILPQTAEEQARILAERLRGAIAEAR-FV 431 Query: 512 AKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 I+ S+GVS+ + + L AD+ LY AK GRN+V S Sbjct: 432 HDGEDFSITVSIGVSALQPGALTRRKDLLEKADKALYQAKHLGRNQVCTS 481 >UniRef50_A7GXF8 3-deoxy-d-manno-octulosonic-acid transferase n=8 Tax=Campylobacterales RepID=A7GXF8_CAMC5 Length = 422 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 62/162 (38%), Positives = 94/162 (58%), Gaps = 5/162 (3%) Query: 398 AWHDTLTRLYNRGALFEK-ARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVL 456 A D LT +YNR ++ + LAK +T + P+++ +D+DHFK IND +GH +GD+VL Sbjct: 261 ANRDFLTSVYNRRYFYDDMTQYLAKAEETAE-PYAIAMIDIDHFKNINDTYGHDSGDKVL 319 Query: 457 SHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTT 516 A + + D+ R GGEEFCV+L S EA + +R K+ ++ + K Sbjct: 320 QFLAKKLVDDTKGNDIVARFGGEEFCVVLKNISQEEAVKFFVNLRAKIANSKISL-KKNV 378 Query: 517 IRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 I + S+GV + DY ++L LAD LY+AK++GRNRV Sbjct: 379 INFTVSIGVVFNR--SDYRLDELLELADEALYIAKESGRNRV 418 >UniRef50_C7R6L5 Diguanylate cyclase n=4 Tax=Gammaproteobacteria RepID=C7R6L5_KANKD Length = 393 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 65/170 (38%), Positives = 102/170 (60%), Gaps = 4/170 (2%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L+ L+ A D LT + +RG ++A L + + + PF + +D+D+FK +ND +GH Sbjct: 225 LEERLRTAAESDALTGVDSRGHFMQRAEALLQRSRFEKAPFCLFMIDVDYFKRVNDTWGH 284 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 GD++LS A + SLR D+ GR GGEEF V LP + +EA VA+ RLK N + Sbjct: 285 TCGDQILSKIAEVCQHSLRPNDIIGRFGGEEFVVGLPNTNTSEAKAVAD--RLKDNVAAL 342 Query: 510 -LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 L + + +R+S ++G++ + +T D D + L + AD LY+ K+ GRNRV Sbjct: 343 TLDGEMSELRLSVTIGIAVA-DTEDDDLDVLITRADNMLYVGKREGRNRV 391 >UniRef50_C9YAH7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YAH7_9BURK Length = 359 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 78/171 (45%), Positives = 97/171 (56%), Gaps = 11/171 (6%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEK--ARPLAKLCQTHQHPFSVIQVDLDHFKAINDRF 447 L LQ Q D LT L NR A F+ A A+ Q + P ++ VD DHFKA ND F Sbjct: 191 LNQDLQEQTLTDPLTALKNRRA-FDTLLANEFAR-SQRSKSPLCLLMVDADHFKAYNDAF 248 Query: 448 GHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEK 507 GH AGD+ L + I S RA D R GGEEFCVILP L EA VAERIR + K Sbjct: 249 GHVAGDQALMFVSLAIKSQARAYDHVARYGGEEFCVILPDTKLNEALVVAERIRESI--K 306 Query: 508 EMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 ++ + ++ S+GV+ SE G ++L LADR +YLAKQ GR+RV Sbjct: 307 SIIGLRRP---MTGSIGVAYSE--GVPSPKRLVELADRAMYLAKQGGRDRV 352 >UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASG6_PELPD Length = 505 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 67/172 (38%), Positives = 96/172 (55%), Gaps = 6/172 (3%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 +Q L+ + D LT LYNR L++ + H HP +++ +D+DHFK IND FGH Sbjct: 325 MQEELREASERDPLTSLYNRRKLYQLLTVELTRTRRHGHPLTLMLLDIDHFKRINDTFGH 384 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 +GD VL+ A LIS+ LR+ D+ R GGEEF + P + AA +AE+IR + Sbjct: 385 DSGDLVLTQVAELISAILRSTDILARYGGEEFVIACPETDMDGAAVLAEKIRSSI----A 440 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + + T ++ S+G+S E D + L AD LY AK+ GRNRV S Sbjct: 441 MFSFPTVGAVTISVGISLLESKDDIN--ALIKRADTALYAAKEMGRNRVVRS 490 >UniRef50_Q8DCJ9 FOG: GGDEF domain n=3 Tax=Vibrio RepID=Q8DCJ9_VIBVU Length = 479 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 67/178 (37%), Positives = 100/178 (56%), Gaps = 2/178 (1%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 +S L++ L+ A D LT +NR + E+A + CQ P S++ +D+DHFK Sbjct: 297 ISERKKLEAMLRNLAATDPLTGAFNRRSFMEQAEKSIRTCQRWNCPLSIMILDIDHFKQF 356 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND +GH AGD VL + S R D+ GR+GGEEF V+LPG EA EVA+R+R Sbjct: 357 NDSYGHAAGDLVLVELVKMADLSTREIDIIGRLGGEEFAVVLPGLGEKEAFEVAKRLR-S 415 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETG-DYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + E + + ++++ S+GV++ + + + EQL AD LY AK GRN V + Sbjct: 416 VVENMQVNYEQQPLQMTISIGVATLQPSELNTPLEQLMKQADEGLYYAKAHGRNCVIS 473 >UniRef50_Q07Y51 Diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q07Y51_SHEFN Length = 359 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 68/170 (40%), Positives = 99/170 (58%), Gaps = 3/170 (1%) Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 LQ A D LT L NR L L + SV+ +DLDHFK IND++GH GD Sbjct: 175 LQKMASLDPLTGLNNRLLLDSIFDMLCESLPEQHQSVSVLILDLDHFKRINDQYGHDVGD 234 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 +VL + +I+S R D A R+GGEEFC+++P ++L +A ++AER+R + + + + Sbjct: 235 KVLVEVSRIINSVRRQNDWAFRLGGEEFCMLIPDSNLQQAGQIAERLRKAV--ELVTVID 292 Query: 514 STTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 + + +S S+GVS E G + F Q+ AD RLY AK GRN+V + N Sbjct: 293 GSELNLSISIGVSRWPEDGAH-FSQIYKTADARLYQAKTLGRNKVITTLN 341 >UniRef50_A3YI97 Sensory transduction/ GGDEF family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YI97_9GAMM Length = 416 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 62/177 (35%), Positives = 101/177 (57%), Gaps = 2/177 (1%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 V+ ++ L A D+LT L+NR L EK+ + L Q+ + P + I +DLD FK + Sbjct: 239 VTGQVEMEKKLTLLAMTDSLTGLFNRRFLMEKSAQIFDLQQSLKLPLACILIDLDKFKRV 298 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND+FGH GD +L + ++ + GR GGEEF V++P + +A +A +R + Sbjct: 299 NDKFGHNIGDEILKAFSNRCQRMIQEPHIIGRYGGEEFLVVMPNTNPEDAVTLANTLR-Q 357 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + ++E + + ++++ S G+S+ T D F+QL AD+RLY AK GRNRV + Sbjct: 358 MCDEEAIETGAGDLKVTMSAGISTL-NTDDTHFDQLVDRADKRLYEAKALGRNRVVS 413 >UniRef50_Q1K3D5 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3D5_DESAC Length = 418 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 75/183 (40%), Positives = 101/183 (55%), Gaps = 10/183 (5%) Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 + V +Y+ QS ++ D LTRLYNR L E+ L Q + F++I DLD+FK Sbjct: 234 QQVHQLYLDQSK---RSITDPLTRLYNRFKLDEELETAFSLFQNYNRTFALIMTDLDYFK 290 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 AINDR+GHQ GD VL A L+ S R+ DV GR GGEEF +I A A +AE++R Sbjct: 291 AINDRYGHQVGDTVLQSIATLLKESSRSADVVGRWGGEEFMIICRDADSNGAFHLAEKLR 350 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR-VFA 560 ++ A+ ++AS GV +E QL D LY AK+AGRN+ V A Sbjct: 351 TEIAS----YARKHEYSLTASFGV--AEPQTQQSLPQLLQSVDEALYAAKRAGRNQTVKA 404 Query: 561 SDN 563 SD+ Sbjct: 405 SDD 407 >UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFS2_CARHZ Length = 543 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 62/170 (36%), Positives = 101/170 (59%), Gaps = 2/170 (1%) Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 L+ A D LT LYNR E+ + H+ ++++ +D+D+FK IND +GH GD Sbjct: 375 LKELAQKDELTGLYNRRYFLERLNEEHLRSRRHKLNYTIVLLDIDYFKKINDTYGHDCGD 434 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 VL+ + +LR D++ R GGEEF V+LP EA +AER+R K+ E+ +LI + Sbjct: 435 LVLNDFGRFLKDTLRRTDLSARYGGEEFVVLLPQTGKKEAYLLAERLREKVKER-VLIFQ 493 Query: 514 STTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 ++ + S+G+++ E + ++ +L SLAD+ LY AK GR++V +N Sbjct: 494 GQKVKYTVSMGLAAYPEDAE-EYRELLSLADKALYQAKNRGRDKVVMVNN 542 >UniRef50_C0QM24 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM24_DESAH Length = 488 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 87/276 (31%), Positives = 130/276 (47%), Gaps = 18/276 (6%) Query: 289 LTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGI--RMDSR--YVSWERLDHFDGVLVRV 344 L N P NIF+ +E+A Q + + + D++ YV+ + F L Sbjct: 213 LHGQNFSKPVKNIFEVKEIAEHRQEIHAGSPLSFQYKKDNKNIYVNNRYIPEFGWYLFVE 272 Query: 345 HTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYV--LQSSLQWQAWHDT 402 GD + TL+ L + +I +I V+N+ + Q L A D Sbjct: 273 QC------GDKAIAKVRNTLVLNLVFSFGIIGLILI---VTNLTIASFQKRLTKMASTDK 323 Query: 403 LTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGL 462 LT +YNR A K Q Q P S+I DLDHFK +ND +GH AGD ++ G Sbjct: 324 LTGVYNRRAFDIIIDQTLKEIQRKQTPLSIILFDLDHFKRVNDTYGHLAGDYIIQTTVGT 383 Query: 463 ISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISAS 522 + ++R D+ R GGEEF ++L G L +A + AE+IR + + A+ +I + Sbjct: 384 AARTIRNSDILCRWGGEEFLILLKGCDLGDAMKTAEKIRTAVASQP---ARYGDDQICVT 440 Query: 523 LGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + V +E TG E L AD+ LYLAK +G+NR Sbjct: 441 ISVGVTEHTGQDTKETLLKRADKALYLAKASGKNRC 476 >UniRef50_A6X0V6 Diguanylate cyclase n=3 Tax=Brucellaceae RepID=A6X0V6_OCHA4 Length = 263 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 68/165 (41%), Positives = 95/165 (57%), Gaps = 6/165 (3%) Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 LQ ++ D +T L NR ALFE K+ ++ +++ +D DHFKAIND FGH GD Sbjct: 79 LQARSRIDHMTGLLNREALFEAM----KISRSRIETGTLLVIDADHFKAINDTFGHGVGD 134 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 R L A + + R D+ GR+GGEEFCV LPGAS VA+RIR ++ + Sbjct: 135 RALKLIAFALQNVTRKGDLVGRIGGEEFCVFLPGASGETGMRVAQRIRAEVENTPFHTTE 194 Query: 514 STTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 ++ S+GV+S+ + + Q+ S ADR LY+AKQ GRN V Sbjct: 195 YQVYPLTISIGVASAPK--NETNSQVLSRADRCLYIAKQRGRNCV 237 >UniRef50_C6DY65 Diguanylate cyclase n=3 Tax=Geobacter RepID=C6DY65_GEOSM Length = 408 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 111/206 (53%), Gaps = 8/206 (3%) Query: 359 SIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGAL-FEKAR 417 S+AL L + + IS++++RR + +Q L+ Q D LT +N+ + + Sbjct: 204 SLALGALAVILVVVFGISYFLVRRGTREIKEIQEVLKKQTMTDALTGTFNKSQIELLACK 263 Query: 418 PLAKLCQTHQHPFS-----VIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDV 472 A+ + + + I +D+D FK +ND GH AGD +L A I+ SLR+ D Sbjct: 264 EFARCARRTEKGLAGADLGFIMIDIDRFKEVNDNHGHLAGDVLLQQFAARIARSLRSYDS 323 Query: 473 AGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETG 532 GR GGEEF V+LPG+ L + VA +I L ++ L+ + ++ASLG ++ +E G Sbjct: 324 IGRFGGEEFLVMLPGSDLEQTRVVARKIWSLLRDEPYLV-DGREMNLTASLGAAAVKE-G 381 Query: 533 DYDFEQLQSLADRRLYLAKQAGRNRV 558 D D + AD+RLY AK GR+RV Sbjct: 382 DADLLHVLKRADQRLYAAKSGGRDRV 407 >UniRef50_C8Q7A8 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b RepID=C8Q7A8_9ENTR Length = 389 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 68/158 (43%), Positives = 90/158 (56%), Gaps = 7/158 (4%) Query: 400 HDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHA 459 HD LT ++NR ALF +A + Q PF+ + DLDHFK+INDR+GHQ GDRVL Sbjct: 222 HDPLTSVWNRRALFAQAEKIIARRLRQQLPFTAVLFDLDHFKSINDRYGHQQGDRVLIDF 281 Query: 460 AGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRI 519 + S L + R+GGEEF ILPG S +A V ERIR+ ++ I Sbjct: 282 CQIAQSLLPEEGQFARLGGEEFAAILPGDS-EQAQMVCERIRVATQ-----LSLPDNISY 335 Query: 520 SASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 + S+G ++S + D F L +LAD LY AK +GRNR Sbjct: 336 TVSIGYATSSQE-DLHFPTLLALADEALYRAKASGRNR 372 >UniRef50_B9YYN2 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YYN2_9NEIS Length = 737 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 66/168 (39%), Positives = 96/168 (57%), Gaps = 2/168 (1%) Query: 391 QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ 450 + L + A D LT L NR + E + + H S++ +DLDHFK IND+ GH Sbjct: 559 EKQLYFLATRDGLTGLLNRRSFMEVGEAEVLRSKRYGHDLSIMMMDLDHFKGINDQHGHA 618 Query: 451 AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEML 510 GD+VL H A L ++ R D+ GR+GGEEF V+LP +L EA +AER+R +++ ++ Sbjct: 619 TGDQVLQHFATLCGNTFRHADIVGRLGGEEFGVLLPFTTLAEAGILAERLRAEVD-GSVV 677 Query: 511 IAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +A + + S+G+SS D D + S AD LY AK GRNR+ Sbjct: 678 MACGVAVHYTVSIGISSVFPD-DKDIDGPLSRADTLLYQAKTLGRNRI 724 >UniRef50_A4JS57 Diguanylate cyclase n=3 Tax=Burkholderia vietnamiensis G4 RepID=A4JS57_BURVG Length = 513 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 80/205 (39%), Positives = 111/205 (54%), Gaps = 3/205 (1%) Query: 362 LTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKAR-PLA 420 LT ALF+ ++ ++ R + + LQ A D LT L NRGA E R A Sbjct: 302 LTGFMALFSVVIWAGALLLARELRRRQRAECDLQRLARRDALTGLENRGAFDETLRQEWA 361 Query: 421 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGE 479 +T +H S++ +D+D FK+ ND +GHQ+GDR L A IS+ + R D R GGE Sbjct: 362 NTLRTGRH-LSLLFIDIDQFKSYNDHYGHQSGDRALKAVAHCISACVSRPSDHVARYGGE 420 Query: 480 EFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQL 539 EF VILP + AA VAE IR +++ + KS ++AS+GVSSS +D + L Sbjct: 421 EFVVILPETDVEGAAAVAEEIRQAIHDMHVAHVKSRFNYVTASIGVSSSAHPAVHDGDAL 480 Query: 540 QSLADRRLYLAKQAGRNRVFASDNA 564 +AD +Y AK GRNRV + A Sbjct: 481 IRVADLAVYEAKSQGRNRVCIAAEA 505 >UniRef50_UPI000185121C diguanylate cyclase n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI000185121C Length = 466 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 66/177 (37%), Positives = 102/177 (57%), Gaps = 6/177 (3%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 LQS L+ A++D LT +YNR A F+ + + PF++I +D+D+FK +ND +GH Sbjct: 289 LQSQLEHFAYYDELTGIYNRRAFFQYCEEAFQESKEQDTPFTIILMDIDYFKKVNDTYGH 348 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 GD+VL A + S L ++ R GGEEF + + G + E A +AE++R +E E Sbjct: 349 SVGDQVLEQVAKVCQSQLHGHELFARYGGEEFVLGVKGYTEEEGAALAEQLR---SEVEA 405 Query: 510 LIAKST--TIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 L + I ++ SLGV++ + D Q+ + AD+ LY AK+AGRNRV N+ Sbjct: 406 LTIHTPDGKITVTLSLGVAALTKE-DEALYQILNHADQALYRAKEAGRNRVCVYQNS 461 >UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IX34_RHOP2 Length = 350 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 66/167 (39%), Positives = 93/167 (55%), Gaps = 2/167 (1%) Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 L+ A D +T ++NR A + + P S + +D+DHFK+IND FGHQ GD Sbjct: 161 LERLATTDGMTGIFNRRHFLTLADREWARARRYGRPLSCLMIDIDHFKSINDDFGHQVGD 220 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 ++ H A L R DV R+GGEEF ++LP L +A VAER+R ++ +L+A Sbjct: 221 DMIVHLAKLARDCKRDCDVLARIGGEEFALLLPETDLPQALAVAERLRGEVAASSLLMA- 279 Query: 514 STTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 S ++R + S+G ++S T D L ADR LY AK GRNRV Sbjct: 280 SGSVRATVSIGAATSAATID-GISDLMRAADRALYEAKHGGRNRVVC 325 >UniRef50_A4B9R1 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Reinekea blandensis MED297 RepID=A4B9R1_9GAMM Length = 650 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 76/180 (42%), Positives = 100/180 (55%), Gaps = 7/180 (3%) Query: 385 SNMYVLQSSLQWQAWHDTLTRLYNRGAL-FEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 +N Q ++ + D LT L NR L E R A+ + QH FS+I VDLDHFK I Sbjct: 477 ANDITYQKEVERLSQTDPLTGLANRMKLDLELGREWARFYRYQQH-FSIIIVDLDHFKTI 535 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND++GHQ GD VL AA ++SS LR D+ GR GGEEF ++LP A VAE++R Sbjct: 536 NDQYGHQEGDLVLKKAADVLSSLLRTTDIIGRWGGEEFLILLPQTDADTAYLVAEKLRAG 595 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 L E L + + T S G +S+ E L ADR LY AK +GRNRV +++ Sbjct: 596 LPLIEGLRSPAPT----GSFGTAST-SVFTSSAEDLIRAADRALYQAKASGRNRVMVAES 650 >UniRef50_C0QPX4 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QPX4_PERMH Length = 331 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 70/185 (37%), Positives = 109/185 (58%), Gaps = 9/185 (4%) Query: 380 IRRMVSNMYVLQSSL---QWQAWHDTLTRLYNRGALFEKARPLA-KLCQTHQHPFSVIQV 435 I++ S ++ L+ L + +A D LT L NR FE+A A K + +PFS+I V Sbjct: 146 IKKYHSEIHQLRQELSHAKTEASMDFLTGLVNRRR-FERALEDAIKDFEKRNYPFSLIYV 204 Query: 436 DLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAE 495 D+D+FK IND +GH GD VL A + LRA + GR+GGEEF ++LPG + +A + Sbjct: 205 DVDNFKDINDNYGHSVGDIVLKEIATIFKFYLRANTIIGRIGGEEFAILLPGVEIEDAVK 264 Query: 496 VAERIRLKLNEKEMLIA--KSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 +AER+R + +E+ I + +R++AS GV+ ++ GD + AD +Y AK+ Sbjct: 265 IAERLRNIIQNREIRIGPDRDEILRVTASFGVTQVKK-GDT-VNSILHRADTAMYRAKKT 322 Query: 554 GRNRV 558 G+N+V Sbjct: 323 GKNKV 327 >UniRef50_C9Y711 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y711_9BURK Length = 292 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 73/184 (39%), Positives = 97/184 (52%), Gaps = 11/184 (5%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRG-----ALFEKARPLAKLCQTHQHPFSVIQ 434 ++R + V Q L + A HD LT LYNR A E R C+T +VI Sbjct: 103 LKRSNEALVVQQQELAFLADHDALTGLYNRREFIRLAQMELLRATRVPCET-----AVIM 157 Query: 435 VDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAA 494 VDLD FK INDR+GH GD VL A ++ +LRA D R+GGEEF V+LP A Sbjct: 158 VDLDFFKKINDRYGHPGGDAVLKATAACLNQALRATDTLARLGGEEFIVLLPATGREGAL 217 Query: 495 EVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAG 554 +VA ++R + + I ++AS GVSS + + + ADR LY+AKQ G Sbjct: 218 QVATKLRDAVRNTAIEF-DGGLIAVTASFGVSSVPAQKHGTVDAIYAAADRALYVAKQLG 276 Query: 555 RNRV 558 R+RV Sbjct: 277 RDRV 280 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 77/226 (34%), Positives = 118/226 (52%), Gaps = 8/226 (3%) Query: 338 DGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIR--RMVSNMYVLQSSLQ 395 DG V +E +R D +S+ ++ + L WY + R ++ ++ L Sbjct: 832 DGDAVGAIQETEALRKDGTRVSVERSV----SSFQLGGRWYAVATIRDITERKATEARLH 887 Query: 396 WQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRV 455 A D+LT L+NR E A + +Q +++ +D+DHFK +ND GH GD V Sbjct: 888 ELATTDSLTGLFNRRRFMELAEREFMRTKRYQGALTMLMMDIDHFKRVNDTHGHGVGDEV 947 Query: 456 LSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKST 515 L A + ++LR D+ GR+GGEEF V+LP A EVA+R+R + EK + + Sbjct: 948 LRELARISRTALRELDILGRLGGEEFGVLLPETDAGPAMEVAQRLRRAI-EKASMATDAG 1006 Query: 516 TIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 T+RI+ S+G ++S + E L AD LY AKQ+GRN+V A Sbjct: 1007 TLRITVSIGAATSNNDAET-VETLLKRADVALYEAKQSGRNKVVAG 1051 >UniRef50_Q12S31 Diguanylate cyclase n=17 Tax=Shewanella RepID=Q12S31_SHEDO Length = 641 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 95/163 (58%), Gaps = 2/163 (1%) Query: 397 QAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVL 456 Q D+LT + NR A ++ ++ + Q P +++ +D+D FK+IND FGH GD + Sbjct: 472 QTTLDSLTGVKNRNAFDKRLVAEGRISRRQQTPMAILMLDIDKFKSINDEFGHLGGDHCI 531 Query: 457 SHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKST 515 A +++ L R D+ R GGEEF +ILP L A VAE +R ++E + L+ Sbjct: 532 QSIAKVLTEQLKRPTDLVSRFGGEEFAIILPNTDLDGAMIVAETVRASIDELQ-LVWDEK 590 Query: 516 TIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 ++ISASLGVS++ D +L LAD+ LY AK+ GRNR+ Sbjct: 591 PMKISASLGVSAAVIESDEHPIELLELADKALYQAKRNGRNRI 633 >UniRef50_B4WZN3 GGDEF domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WZN3_9GAMM Length = 395 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 72/169 (42%), Positives = 96/169 (56%), Gaps = 2/169 (1%) Query: 391 QSSLQWQAWHDTLTRLYNRGALFEK-ARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 ++ ++ A D LT L NR ALF++ A +A+ +T + SV +DLDHFK INDR GH Sbjct: 215 EAQVRAMAVQDPLTGLSNRRALFDQFAHEMARARRTGE-ALSVCVMDLDHFKQINDRHGH 273 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 AGD VL A L+ LR D GR+GGEEF ++LP A +V ER R L + Sbjct: 274 AAGDTVLVRVANLLRECLRETDRIGRIGGEEFVLVLPDTGHEGAEKVIERCRAALVGTPV 333 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 ++ + +SAS GV ++ QL S AD LYLAK+ GRNRV Sbjct: 334 MLDVGEPLTVSASFGVVTALAGEQATESQLVSRADDALYLAKKRGRNRV 382 >UniRef50_B2V5Y5 Diguanylate cyclase n=3 Tax=Sulfurihydrogenibium RepID=B2V5Y5_SULSY Length = 411 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 62/172 (36%), Positives = 94/172 (54%), Gaps = 3/172 (1%) Query: 387 MYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDR 446 +Y+ ++ + D LT +NR + L ++ Q P ++ DLD+FK IND Sbjct: 241 LYLNTKFIKLEMSIDPLTGAFNRRGFEIIIQKLLEISQITDAPITLAMADLDYFKKINDT 300 Query: 447 FGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNE 506 FGH AGD L H +I +LR D R+GGEEF ++LP L +A E+ ERIR L E Sbjct: 301 FGHLAGDEALKHFVNIIKRNLRKSDYVFRIGGEEFLILLPNTELKDAVEIVERIRKDLEE 360 Query: 507 KEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 L I+I+AS G++ ++ + ++ AD +LY AK++GRN+V Sbjct: 361 NS-LHYDGKEIKITASFGLAEVDKEKYIN--EIIKKADEKLYKAKESGRNKV 409 >UniRef50_A0KRY2 Diguanylate cyclase n=4 Tax=Gammaproteobacteria RepID=A0KRY2_SHESA Length = 581 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 113/214 (52%), Gaps = 7/214 (3%) Query: 352 RGDFGSIS---IALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYN 408 R +F +S + + ++ L+I++ + R++ + Q L++QA D+LT L+N Sbjct: 361 RAEFSYLSSHGVGVGIMLEALVLALIIAYRI--RLLEEIKASQEELKYQAATDSLTHLFN 418 Query: 409 RGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLR 468 R ++A+ + Q P +VI D+D FK +ND++GH GD+V+ A + R Sbjct: 419 RRHFHKEAQRIYMQASVTQQPMAVIICDIDLFKRVNDKYGHLMGDQVIIDIATTLKQHAR 478 Query: 469 AQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSS 528 D+ R GGEEF ++L SLTEA + AERIR + E + ++ SLGV++ Sbjct: 479 KCDIVARYGGEEFIMLLHDVSLTEAHQCAERIRSAVAELSFMAETQEAFTVTLSLGVAAV 538 Query: 529 EETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + + E LAD LY AK GRN V +S+ Sbjct: 539 DFV--HPLEHAIKLADDALYRAKHQGRNNVQSSE 570 >UniRef50_Q98G89 Mll3440 protein n=1 Tax=Mesorhizobium loti RepID=Q98G89_RHILO Length = 426 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 71/170 (41%), Positives = 100/170 (58%), Gaps = 3/170 (1%) Query: 393 SLQWQAWHDTLTRLYNRGALFE-KARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQA 451 +L+ Q+ D T LYNR L E +R L ++ ++ Q P ++I +D+DHFK ND FGH+A Sbjct: 241 TLRQQSIRDPNTGLYNRRYLEETSSRELRRMERSGQ-PLAMIMLDVDHFKQFNDTFGHEA 299 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GD VL A + R DV R GGEEF +++PG SL +AAE AE +R + + + Sbjct: 300 GDLVLKQVAATLLDHARESDVVSRYGGEEFALMMPGTSLADAAERAEALRKAIKQLHLTH 359 Query: 512 AKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 T I+AS GVS+ E G + ++ + ADR LY AK GR+RV A Sbjct: 360 RGRTLGTITASFGVSAFPELG-ASWVEIVNAADRSLYQAKADGRDRVVAG 408 >UniRef50_UPI0000E11028 response regulator receiver modulated diguanylate cyclase n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E11028 Length = 323 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 67/165 (40%), Positives = 91/165 (55%), Gaps = 2/165 (1%) Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 LQ ++ D LT + NR + + Q H + DLDHFKAIND GH AGD Sbjct: 145 LQKESLTDVLTGISNRRHFKDILKKEMVKAQRHDRAMCIAYFDLDHFKAINDGLGHDAGD 204 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 VL + IS +LRA+D GR+GGEEFC+ +P SL EA +ER RL + EK + Sbjct: 205 EVLRKVSSAISETLRAEDSFGRLGGEEFCICMPDTSLNEALIPSERYRLMI-EKLTIEYN 263 Query: 514 STTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + I ++AS GV+ + +D L + AD LY +K GRN+V Sbjct: 264 NKPINVTASFGVTEFKPFL-HDINSLLAHADEALYKSKHQGRNQV 307 >UniRef50_A8FZA2 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8FZA2_SHESH Length = 610 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 63/171 (36%), Positives = 95/171 (55%), Gaps = 2/171 (1%) Query: 388 YVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRF 447 ++ Q L+ A D LT ++NRG + A+ + C+ S I DLD FK IND + Sbjct: 410 WMTQKRLKQLAEFDALTGVFNRGHFTQLAQSALQYCENSDIYLSCILFDLDKFKTINDSY 469 Query: 448 GHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEK 507 GH GD VL A + R+ D+ R+GGEEFC++LPG L A +AE R + + Sbjct: 470 GHACGDWVLKRVADVCKVQGRSNDIFARLGGEEFCILLPGCDLLTATRLAETCRKAIAQL 529 Query: 508 EMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + + + I I+AS GV+ ++ +G YD E++ + AD +Y +K GRNR Sbjct: 530 DTSDSGAEFI-ITASFGVTDAKLSG-YDLEKITADADMAMYQSKHDGRNRT 578 >UniRef50_C4XKN6 Putative signaling protein n=2 Tax=Desulfovibrio magneticus RS-1 RepID=C4XKN6_DESMR Length = 629 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 1/186 (0%) Query: 378 YVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDL 437 + R ++ +++ L+ A D+LT L NR E + L ++ + H+ S+ D+ Sbjct: 433 FAAARDITERKIMEERLKEMATTDSLTGLNNRQHFLEHSSILFEMAKRHKANLSIALFDI 492 Query: 438 DHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVA 497 DHFK +ND +GH+AGD VL + L + R+ D+ GR+GGEEF VI+P EA + Sbjct: 493 DHFKQVNDTWGHEAGDLVLRELSKLALNCFRSSDIIGRIGGEEFAVIMPETDKEEAILAS 552 Query: 498 ERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 ER R K+ E ++ + I+ S+G++ + L ++D LY AK GRN Sbjct: 553 ERFR-KIVESTRFEYENDLLSITVSIGIAQFNPNTNTTINDLTKISDDALYTAKANGRNM 611 Query: 558 VFASDN 563 VF +++ Sbjct: 612 VFCAND 617 >UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YI13_9CYAN Length = 1006 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 71/177 (40%), Positives = 101/177 (57%), Gaps = 9/177 (5%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEK-ARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 L+ LQ ++ D LT L+NR L E R + + C+ + H VI +D+DHFK ND FG Sbjct: 833 LREELQNRSIRDPLTGLFNRRYLEESLEREINRACR-NDHNVGVIMIDIDHFKRFNDTFG 891 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H GD VL L+ SSLRA D+A R GGEE +ILP AS+ + AE++R + + Sbjct: 892 HDGGDAVLKEVGKLLKSSLRASDIACRYGGEEMTLILPEASIENTYKRAEQVRKLIKQIN 951 Query: 509 MLIAKSTTIRISASLGVSSSEE---TGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + + + I+ASLGV+ E TGD ++ AD LY AK+ GR+RV ++ Sbjct: 952 IEHKRQSLGTITASLGVACFPEHGMTGDAVVQR----ADTALYQAKKEGRDRVVGAE 1004 >UniRef50_B7KW39 Diguanylate cyclase n=3 Tax=Methylobacterium extorquens group RepID=B7KW39_METC4 Length = 574 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 73/175 (41%), Positives = 98/175 (56%), Gaps = 6/175 (3%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 +SN+ L+ L+ QA D LT LYNR + + +L + SVI +DLDHFK + Sbjct: 378 LSNI-ALREKLRNQALRDPLTGLYNRRYMEDSLERYVRLAEREGRKVSVIMIDLDHFKRL 436 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND GH GD VL AA I +LR DVA R GGEE V LP L +AA AE+IR + Sbjct: 437 NDEHGHATGDAVLCEAAAAIVGALRETDVACRYGGEEMIVFLPDCDLEDAAAKAEQIRGR 496 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + ++ + ++SASLGV+S T E +++ AD LY AK GRN+V Sbjct: 497 IES----LSGTHGAKVSASLGVASVPSTSGTSAELIRA-ADTALYRAKHNGRNQV 546 >UniRef50_Q6AJ00 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ00_DESPS Length = 571 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 63/161 (39%), Positives = 94/161 (58%), Gaps = 3/161 (1%) Query: 398 AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLS 457 A D+LT+L NR F L + P SV+ +D+DHFK +ND GHQAGD+VL Sbjct: 410 AATDSLTKLNNRRHFFSLGHEELALHLHNAQPLSVLMLDIDHFKNVNDTLGHQAGDKVLK 469 Query: 458 HAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTI 517 + + + +LR+ D+ GR+GGEEF VIL ++A AERIRL + E K + Sbjct: 470 IFSKICAVNLRSVDIIGRIGGEEFAVILTNTPRSQAQRTAERIRLAI-ETSPEFTKQSLP 528 Query: 518 RISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +I+ S+G+++++ + D + AD+ LY AK GRNR+ Sbjct: 529 KITVSIGIATNQPPENLD--AIICRADKNLYQAKSNGRNRI 567 >UniRef50_A0P392 GGDEF domain protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P392_9RHOB Length = 307 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 118/217 (54%), Gaps = 8/217 (3%) Query: 347 LSEGVRGDFGSISIALTLLWA--LFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLT 404 LS G+ GD S+ + + L + L +++ ++ ++ + N L LQ+ A HD LT Sbjct: 92 LSNGL-GDSASLQLDVMTLVSIRLGISLVALAPIMLSCVTQNRNALVGRLQYLATHDQLT 150 Query: 405 RLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLIS 464 + NR A E+A A+ F+++ VDLD FKA+ND GH GD VL + + Sbjct: 151 NVLNRNAFREEA---ARRLALGTSGFALLMVDLDDFKAVNDTHGHATGDTVLVNFVHRVK 207 Query: 465 SSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLG 524 ++L + GR+GGEEF V++P +A AE IR + + + +R++ASLG Sbjct: 208 NTLPPGSLLGRMGGEEFAVLIPDCRQVDAVAEAENIRQSVGTEPVPAGDGKEVRVTASLG 267 Query: 525 VSSSEETGDYD-FEQLQSLADRRLYLAKQAGRNRVFA 560 V + E GD D + L + ADR YLAK+ GRNRV A Sbjct: 268 VVAVEH-GDADSLDTLLAEADRLCYLAKKRGRNRVEA 303 >UniRef50_Q3SEU1 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SEU1_THIDA Length = 632 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 70/180 (38%), Positives = 101/180 (56%), Gaps = 4/180 (2%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 +R++ + + V L A D LT L NR + ++ P +V+ VD+DH Sbjct: 443 LRQIAAELAVANRRLANAALTDALTGLPNRRSAMDQLEQAWSAAARADTPLAVMVVDIDH 502 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK IND GH GD+VL AA + +S R +D R+GGEEF VI P L A + AER Sbjct: 503 FKHINDTHGHALGDKVLREAANALRASSRREDSVCRIGGEEFLVICPNTDLAAAMQSAER 562 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSE-ETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +R L+ + + + ++ I+AS+GV+ E +T D D L S AD+ LY AK+AGRN+V Sbjct: 563 LRATLSARRIAVGEAECT-ITASIGVAVREYDTADID--GLVSAADQALYAAKEAGRNQV 619 >UniRef50_Q1QZQ9 Diguanylate cyclase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZQ9_CHRSD Length = 363 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 112/200 (56%), Gaps = 15/200 (7%) Query: 365 LWALFTTMLLISW--YVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKL 422 L A+F + LI W +VI + + + A HD LT + NR A+F +A L Sbjct: 169 LVAVFLVLGLIMWRLHVITERCEHHF------RRDATHDYLTTVLNRRAIFHEADMLWH- 221 Query: 423 CQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFC 482 Q F+++ +D DHFK IND +GH AGD VL H A + +LR D GRVGGEEF Sbjct: 222 ---QQRHFTLLLLDADHFKQINDEYGHTAGDEVLRHLANTLRGALREHDRLGRVGGEEFL 278 Query: 483 VILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSL 542 ++LP + E VA IR L+++ + + T+ ++ S+G+++S+E ++ L Sbjct: 279 IVLPESEREEVLAVAAHIRQCLSDRPCQL-DTLTLPVTFSMGLAASDEAA--LLSEVIDL 335 Query: 543 ADRRLYLAKQAGRNRVFASD 562 ADRRLY AK AGR+++ + Sbjct: 336 ADRRLYRAKSAGRDQLVMGE 355 >UniRef50_B2T333 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2T333_BURPP Length = 444 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 73/185 (39%), Positives = 101/185 (54%), Gaps = 3/185 (1%) Query: 375 ISWY-VIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 IS Y V+ R V+ V +L D LT + +R FE A + H SV+ Sbjct: 239 ISGYSVVLRDVTERKVSSDNLARLLTTDHLTGVSSRAHFFEIAEAEVARAERHGRALSVV 298 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEA 493 +D D+FK IND GHQAGD VL AG LR D R+GGEEF ++LP + +EA Sbjct: 299 MLDADYFKRINDTAGHQAGDEVLKRIAGEAKGLLRTSDTVARLGGEEFILMLPSTTTSEA 358 Query: 494 AEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 VAER+R+ + E+ + T++ + SLGV++ T + + L + ADR LY AK+A Sbjct: 359 VAVAERLRVAV-ERARIDTAVGTLKATVSLGVATV-STANPTLQSLLAAADRALYDAKRA 416 Query: 554 GRNRV 558 GRN V Sbjct: 417 GRNCV 421 >UniRef50_B1Y766 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y766_LEPCP Length = 381 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 76/168 (45%), Positives = 97/168 (57%), Gaps = 12/168 (7%) Query: 398 AWHDTLTRLYNR----GALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 A D LT L NR AL E+ + C + FSV +D+DHFK IND +GH GD Sbjct: 215 AERDELTGLPNRRRMQAALAEER----ERCSRNGVSFSVAMLDIDHFKRINDLYGHPMGD 270 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGAS-LTEAAEVAERIRLKLNEKEMLIA 512 VL A L+ ++LR D+ GRVGGEEF +ILPGA+ L EA V ER+R + E A Sbjct: 271 AVLRSVAQLMRTALRKPDLVGRVGGEEFLMILPGAARLEEAKHVVERVRAAI-EGNDWSA 329 Query: 513 KSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 ++++AS+GV+ E E L ADR LYLAKQ GRN+V A Sbjct: 330 TRADLQVTASIGVAVGEP--GESVESLFDRADRGLYLAKQGGRNQVAA 375 >UniRef50_A8FHG3 Possible diguanylate cyclase n=2 Tax=Bacillus pumilus RepID=A8FHG3_BACP2 Length = 529 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 65/184 (35%), Positives = 100/184 (54%), Gaps = 11/184 (5%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 V+ +LQ L+ +A+ D LT ++NR + E+ + + + +V+ D+D FK I Sbjct: 346 VTEQRLLQEELERRAYIDGLTNIFNRSSFIERTQ---MILEEDAQDTAVMLFDIDFFKQI 402 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND GH GD L H + L+ D+ GR GGEEF + LP S EA +AERIR Sbjct: 403 NDTHGHHIGDEALRHVVTICQQHLQMDDLFGRYGGEEFAICLPHHSFEEACHIAERIRHS 462 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSL---ADRRLYLAKQAGRNRVFA 560 E + +R++AS G++ + YD L++L AD+ LY++K+ GRNR++A Sbjct: 463 F-EMSFFENEEEKVRVTASFGIAHTA----YDPNVLETLLFEADQALYMSKRQGRNRIYA 517 Query: 561 SDNA 564 S A Sbjct: 518 STGA 521 >UniRef50_Q47V44 GGDEF domain protein n=2 Tax=Gammaproteobacteria RepID=Q47V44_COLP3 Length = 266 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 117/206 (56%), Gaps = 7/206 (3%) Query: 357 SISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQ--AWHDTLTRLYNR-GALF 413 S L LL++ T L + Y R S + L+ S ++Q A D LT+L NR AL Sbjct: 62 STEFKLRLLYSFLTVTFLSALYEYSRNKSYQHTLELSKKYQQLAHFDPLTQLSNRRDALG 121 Query: 414 EKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVA 473 + A++ ++ + P S+I D+D+FK IND++GH AGD VL A + +S++R QD Sbjct: 122 ILKQEQARMIRS-KEPLSIIICDVDYFKKINDQYGHNAGDAVLIELAKIFTSNIREQDCV 180 Query: 474 GRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGD 533 R GGEEF ILP A A +I+ KL + ++ + I++S S+G+ + G+ Sbjct: 181 ARWGGEEFLFILPQTLARNANVFAVKIQEKL-QNHLVDYQGKEIKVSVSMGI--EQFNGN 237 Query: 534 YDFEQLQSLADRRLYLAKQAGRNRVF 559 + +++ + AD+ LY AK +GRN++F Sbjct: 238 QNIDEIINSADKYLYQAKNSGRNQIF 263 >UniRef50_UPI000178A26E diguanylate cyclase with GAF sensor n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A26E Length = 663 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/170 (39%), Positives = 93/170 (54%), Gaps = 12/170 (7%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L + ++ A D LT LY R L E + CQ S+I VD+D FK +ND FGH Sbjct: 493 LHAEVRRMANRDMLTELYARHYLDE----IIHECQNRDFCGSLIVVDIDEFKQVNDTFGH 548 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 Q GD++L + ++ +++R D+ R GGEE V LPG + +A +VAERIRL+ Sbjct: 549 QRGDKILKQVSSIVKTTIRHSDIPARWGGEELAVYLPGLGIQQAVQVAERIRLR------ 602 Query: 510 LIAKSTTIRISASLGVSSSEETGD-YDFEQLQSLADRRLYLAKQAGRNRV 558 +A+ T R++ S G+S T D E L AD LY AK GRNR+ Sbjct: 603 -VAEETDPRVTVSCGISEWNWTNDKISVESLFYRADMALYEAKNGGRNRI 651 >UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geobacter sp. M18 RepID=C6MUF5_9DELT Length = 739 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 77/179 (43%), Positives = 105/179 (58%), Gaps = 10/179 (5%) Query: 389 VLQSSLQWQ--AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPF--SVIQVDLDHFKAIN 444 VL+ S +++ + D LT LYNR F K+R +L ++ + +VI +DLD FK N Sbjct: 531 VLEESERFEQLSVTDALTGLYNR--RFLKSRLEEELNRSIRQGLNLTVIFIDLDFFKNFN 588 Query: 445 DRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKL 504 D GH AGD L A +I +SLR D+ R GGEEFC +LPG S EA VAERIR ++ Sbjct: 589 DLCGHLAGDEALKITADIIKASLREMDIVARYGGEEFCAVLPGTSKAEAMIVAERIRSEI 648 Query: 505 NEKEMLIAKSTT--IRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 EKE + +R++ASLG++S E G F L +D LY AK +GRNR+ A+ Sbjct: 649 -EKEKFPGEKDIPQMRLTASLGIASFPEDG-RTFTTLVHSSDVALYEAKASGRNRIVAA 705 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 91/172 (52%), Gaps = 6/172 (3%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L L Q+ D LT +YNR L K KL + H P S+I D+D FK IND FGH Sbjct: 607 LSDMLLKQSTEDPLTGIYNRRYLENKLEEYVKLAKRHDRPLSLIMFDIDFFKHINDSFGH 666 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 GD+VL A ++S ++R D+ R GGEEF +I P + +A +AE++R + Sbjct: 667 DVGDKVLKAIAKVVSENIRNTDIFARYGGEEFVIIAPETTKEDAKILAEKLRSLIRN--- 723 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + I ++ S GV+S E+ E L AD LY AK+ GRN+V + Sbjct: 724 -LHFEEGINVTCSFGVASLEKHDTK--ETLLKRADEALYEAKKTGRNKVVVT 772 >UniRef50_B2V8X7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V8X7_SULSY Length = 675 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/176 (36%), Positives = 103/176 (58%), Gaps = 3/176 (1%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 ++SN+ +++ + + + D LT LYNR E + + + P S++ +DLD FK Sbjct: 500 VLSNLRLIEINKEL-SIRDPLTGLYNRRFALEFMNKEIEKSKRNGKPLSIVMIDLDDFKK 558 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 IND GH AGD +L + ++ LR D++ R GGEEF +ILP S + +V ERIR+ Sbjct: 559 INDIHGHSAGDNILKIFSDVLKKELRKSDISCRWGGEEFLLILPETSKDKTLDVIERIRM 618 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 M I S+ ++AS+G++S E D + +++ +AD RLY+AK+ G+NRV Sbjct: 619 TFQLNTMGIV-SSRPYLTASMGIASYPEDSD-NIDEIIKIADDRLYVAKREGKNRV 672 >UniRef50_B3E4W4 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E4W4_GEOLS Length = 346 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/158 (43%), Positives = 91/158 (57%), Gaps = 3/158 (1%) Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D LT+L NR EK + L Q + PFS++ +D+D+FK IND GHQAGDR+L A Sbjct: 175 DGLTQLANRAYFDEKLLEMILLHQRYNEPFSLMMIDVDYFKNINDSHGHQAGDRILKGVA 234 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRIS 520 I +SLR D R GG+EF +IL ASL A +AE+I + E ++ T +++ Sbjct: 235 FKIKASLRESDFLARFGGDEFALILIKASLQPATVLAEKICTNIRESRFIL-DGTEFKVT 293 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 S+GV +E D E L ADR LYL K+ GRN V Sbjct: 294 LSIGV--AEVHADDTPESLLQRADRALYLVKERGRNGV 329 >UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUF5_9AQUI Length = 283 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/168 (39%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L L++ A D+LT YNR + E + + + +P SV+ +D+D+FK +ND +GH Sbjct: 119 LIRELRFLADTDSLTGFYNRRKIEEILAKEIERSRRYGNPLSVLFIDVDNFKELNDTYGH 178 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 ++GD VL A +I S LR D GR GGEEF VILP A VAERIR ++ ++ Sbjct: 179 KSGDEVLRKIAEIIKSELRRTDYVGRFGGEEFMVILPETDSQSALRVAERIRKRVEREDF 238 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 T +++ S+GV+ +E GD D L + DR +YLAK+ G+NR Sbjct: 239 -----KTGKVTVSVGVTELKE-GD-DLNTLFNRVDRAMYLAKERGKNR 279 >UniRef50_Q73IE7 Response regulator/GGDEF domain protein n=20 Tax=Rickettsiales RepID=Q73IE7_WOLPM Length = 460 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/162 (36%), Positives = 95/162 (58%), Gaps = 1/162 (0%) Query: 398 AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLS 457 + D LT YNR R + K S++ +D+D+FK +ND FGH AGD +L Sbjct: 294 SIKDPLTNCYNRRYFDAHLRNIVKDSVEKDRRLSLMILDIDYFKIVNDSFGHSAGDELLK 353 Query: 458 HAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA-KSTT 516 IS ++R D+ R GGEEF V++P ++++A +AERIR + +K ++A K+TT Sbjct: 354 QIQKRISENIRVTDLLARFGGEEFVVVMPDTNVSDAYTIAERIRKIIAKKPFILADKNTT 413 Query: 517 IRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 ++ S+G++ +E+ + ++ AD+ LY AK +GRNRV Sbjct: 414 HDVTVSIGIAEMQESDLDNIKEFIVRADKYLYKAKNSGRNRV 455 >UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TNC9_9BACT Length = 494 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 80/230 (34%), Positives = 115/230 (50%), Gaps = 23/230 (10%) Query: 332 ERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQ 391 ER DG+L + +S G + I AL M+L V++ + N+ Sbjct: 282 ERKTDLDGLLDVMSEISSGASDEISYICEALK-------DMIL----VLKDKMENIQSYS 330 Query: 392 SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQA 451 L++ A D+LT L+NR + + + + SV+ VD+DHFK +ND FGH+ Sbjct: 331 DRLEYLANRDSLTGLWNRRKMDQILLSETERSSRYGSSLSVVMVDIDHFKNVNDNFGHEV 390 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GD VLS A L+ + RA D GR GGEEF V+LP + A E AER+R + + Sbjct: 391 GDTVLSSIAALMKNCTRAGDSVGRWGGEEFLVVLPETDVKGALEYAERMRSAVEDNVF-- 448 Query: 512 AKSTTIRISASLGVS---SSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 IRI++S GV+ S E ++ + AD LY AK+ GRNRV Sbjct: 449 --HDDIRITSSFGVTQYRSGEPVNEF-----VARADEALYDAKEKGRNRV 491 >UniRef50_A8LJ58 Response regulator n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LJ58_DINSH Length = 462 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 66/167 (39%), Positives = 94/167 (56%), Gaps = 8/167 (4%) Query: 397 QAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVL 456 QA D LT LYNR + +A+ F+V+ +D DHFK IND +GH AGD+VL Sbjct: 290 QAVIDPLTGLYNRRFALGQLSNIAQEALKTHRTFAVLLLDFDHFKKINDAYGHAAGDKVL 349 Query: 457 SHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKS-- 514 + A L+ + LR+ DV R+GGEEF ++LP L EA VAER+R +++ + + Sbjct: 350 AETATLLRTRLRSLDVIARIGGEEFLMVLPDTDLDEARRVAERLRASIDDHPIALPHGKG 409 Query: 515 ---TTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 TI I ++G +++ E +L ADR LY AK GRN+V Sbjct: 410 SIPVTISIGLAIGGAAAPEAS---VSELLETADRALYAAKSEGRNQV 453 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q3Z0N3 Cellulose synthesis regulatory protein n=28 Tax=... 822 0.0 UniRef50_Q5PLI4 Cellulose synthesis regulatory protein n=77 Tax=... 737 0.0 UniRef50_C8QGL2 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b Re... 617 e-175 UniRef50_C9XVB6 Cellulose synthesis regulatory protein n=9 Tax=E... 605 e-171 UniRef50_Q1LHF7 Diguanylate cyclase (GGDEF domain) n=2 Tax=cellu... 530 e-149 UniRef50_Q46VS6 GGDEF n=1 Tax=Ralstonia eutropha JMP134 RepID=Q4... 522 e-146 UniRef50_Q1LM75 Diguanylate cyclase (GGDEF domain) n=2 Tax=Cupri... 491 e-137 UniRef50_C0QM24 Putative uncharacterized protein n=1 Tax=Desulfo... 287 6e-76 UniRef50_C7HYK2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 284 5e-75 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 277 9e-73 UniRef50_Q0EXC8 Signal transduction protein containing a membran... 276 2e-72 UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydroge... 275 4e-72 UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 274 7e-72 UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 273 1e-71 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 271 4e-71 UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GC... 270 1e-70 UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7Q... 270 1e-70 UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 269 3e-70 UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 267 6e-70 UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 267 9e-70 UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromato... 265 3e-69 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 265 4e-69 UniRef50_C4XKN6 Putative signaling protein n=2 Tax=Desulfovibrio... 264 1e-68 UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnet... 263 1e-68 UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 263 2e-68 UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnet... 262 3e-68 UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4S... 262 3e-68 UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum al... 262 3e-68 UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobac... 262 3e-68 UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID... 261 4e-68 UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms R... 261 4e-68 UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0... 261 8e-68 UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0... 260 1e-67 UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 260 1e-67 UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 260 1e-67 UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 259 2e-67 UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 259 2e-67 UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 259 3e-67 UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 258 5e-67 UniRef50_Q1JWQ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 258 5e-67 UniRef50_Q489Q4 Sensory box/GGDEF domain protein n=1 Tax=Colwell... 257 6e-67 UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 257 6e-67 UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors... 257 7e-67 UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 T... 257 7e-67 UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 257 8e-67 UniRef50_C6P6Y5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 257 8e-67 UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya... 257 1e-66 UniRef50_A3Y6S3 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121... 257 1e-66 UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 256 2e-66 UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor d... 256 2e-66 UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with... 255 3e-66 UniRef50_Q2W1M0 Response regulator containing a CheY-like receiv... 255 3e-66 UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Camin... 255 3e-66 UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 255 4e-66 UniRef50_A8ZX32 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 254 6e-66 UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgar... 254 1e-65 UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliil... 253 1e-65 UniRef50_A4JS57 Diguanylate cyclase n=3 Tax=Burkholderia vietnam... 253 1e-65 UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors... 253 1e-65 UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus... 253 1e-65 UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 253 2e-65 UniRef50_A0KRY2 Diguanylate cyclase n=4 Tax=Gammaproteobacteria ... 253 2e-65 UniRef50_A0Y806 Predicted signal transduction protein containing... 253 2e-65 UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 252 2e-65 UniRef50_Q0A8G7 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 252 2e-65 UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobact... 252 2e-65 UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 252 2e-65 UniRef50_B8I5B8 Diguanylate cyclase n=4 Tax=Clostridium RepID=B8... 252 2e-65 UniRef50_Q39ZK6 Response regulator receiver modulated diguanylat... 252 3e-65 UniRef50_Q65IC8 GGDEF-domain containing protein n=1 Tax=Bacillus... 252 3e-65 UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 68... 252 3e-65 UniRef50_Q3A5K1 Two component signal transduction response regul... 252 3e-65 UniRef50_Q74EL0 GGDEF domain protein n=1 Tax=Geobacter sulfurred... 252 3e-65 UniRef50_Q0VL34 GAF/PAS/GGDEF domain protein n=2 Tax=Alcanivorax... 252 3e-65 UniRef50_A4TZG0 GGDEF n=1 Tax=Magnetospirillum gryphiswaldense R... 251 5e-65 UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing pr... 251 5e-65 UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 251 6e-65 UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoe... 251 6e-65 UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 250 7e-65 UniRef50_Q2VZ27 Response regulator containing a CheY-like receiv... 250 9e-65 UniRef50_C7I354 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 250 9e-65 UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkonge... 250 9e-65 UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clos... 250 1e-64 UniRef50_B1G121 Diguanylate cyclase n=4 Tax=Burkholderia RepID=B... 250 1e-64 UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis ... 250 1e-64 UniRef50_B6BNQ1 Diguanylate cyclase n=2 Tax=cellular organisms R... 250 1e-64 UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hy... 249 2e-64 UniRef50_C4XS30 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 249 2e-64 UniRef50_Q3JE99 Response regulator receiver modulated diguanylat... 249 2e-64 UniRef50_Q47Y21 GGDEF domain protein n=1 Tax=Colwellia psychrery... 249 2e-64 UniRef50_C6BSU0 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 249 2e-64 UniRef50_Q31IP8 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 249 2e-64 UniRef50_Q39S35 Diguanylate cyclase with GAF sensor n=2 Tax=Geob... 249 2e-64 UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=... 249 2e-64 UniRef50_A4C957 Putative uncharacterized protein n=1 Tax=Pseudoa... 249 3e-64 UniRef50_B5JTF6 Signaling protein with membrane-bound sensor dom... 249 3e-64 UniRef50_Q1JZ09 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 249 3e-64 UniRef50_C6NZM9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotr... 249 3e-64 UniRef50_B4WZN3 GGDEF domain protein n=1 Tax=Alcanivorax sp. DG8... 249 3e-64 UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 248 4e-64 UniRef50_B8KPY0 Sensory box/ggdef domain protein n=1 Tax=gamma p... 248 4e-64 UniRef50_P54595 Uncharacterized protein yhcK n=2 Tax=Bacillus su... 248 4e-64 UniRef50_Q02P32 Putative two-component response regulator n=6 Ta... 248 5e-64 UniRef50_A1VD57 Diguanylate cyclase n=3 Tax=Desulfovibrio vulgar... 248 5e-64 UniRef50_B7WUF6 Diguanylate cyclase n=1 Tax=Comamonas testostero... 248 5e-64 UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiob... 248 5e-64 UniRef50_B8GC13 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 247 6e-64 UniRef50_B6IWW6 Diguanylate cyclase, putative n=1 Tax=Rhodospiri... 247 6e-64 UniRef50_Q1K456 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 247 7e-64 UniRef50_C6NZP2 Periplasmic/7TM domain sensor diguanylate cyclas... 247 7e-64 UniRef50_A8UT68 Putative uncharacterized protein n=2 Tax=Aquific... 247 8e-64 UniRef50_A4BRN6 Putative signal transduction protein n=1 Tax=Nit... 247 8e-64 UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus L... 247 8e-64 UniRef50_C9YC42 Putative uncharacterized protein n=1 Tax=Curviba... 247 8e-64 UniRef50_A6W0K6 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL... 247 9e-64 UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Breviba... 247 1e-63 UniRef50_Q085X7 Diguanylate cyclase n=2 Tax=Alteromonadales RepI... 247 1e-63 UniRef50_Q6AJ00 Putative uncharacterized protein n=1 Tax=Desulfo... 247 1e-63 UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas ... 247 1e-63 UniRef50_Q2RUX2 Putative diguanylate cyclase (GGDEF domain) with... 247 1e-63 UniRef50_A3WKT4 GGDEF domain protein n=2 Tax=Alteromonadales Rep... 247 1e-63 UniRef50_Q0EZJ4 GGDEF/response regulator receiver domain protein... 247 1e-63 UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepI... 246 1e-63 UniRef50_A8UV88 Putative uncharacterized protein n=1 Tax=Hydroge... 246 1e-63 UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromob... 246 1e-63 UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 246 2e-63 UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax... 245 2e-63 UniRef50_D1B7Z4 Sensor protein n=1 Tax=Thermanaerovibrio acidami... 245 3e-63 UniRef50_Q5NP17 Diguanylate cyclase with beta propeller sensor n... 245 3e-63 UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrery... 245 3e-63 UniRef50_C4K9W4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 3e-63 UniRef50_A1AUD4 Diguanylate cyclase n=1 Tax=Pelobacter propionic... 245 3e-63 UniRef50_C0QTH1 Signal transduction response regulator n=1 Tax=P... 245 3e-63 UniRef50_A1SRL2 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 245 4e-63 UniRef50_A6VRQ0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 4e-63 UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobiu... 245 4e-63 UniRef50_D1U9G5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 4e-63 UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 245 4e-63 UniRef50_Q47X90 GGDEF domain protein n=1 Tax=Colwellia psychrery... 245 4e-63 UniRef50_Q8DCJ9 FOG: GGDEF domain n=3 Tax=Vibrio RepID=Q8DCJ9_VIBVU 245 4e-63 UniRef50_Q2RNX7 Putative diguanylate cyclase (GGDEF domain) with... 245 5e-63 UniRef50_Q98G89 Mll3440 protein n=1 Tax=Mesorhizobium loti RepID... 245 5e-63 UniRef50_C7LVZ4 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 244 5e-63 UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteoba... 244 5e-63 UniRef50_A0LAY9 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC... 244 7e-63 UniRef50_C5T8F5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 244 7e-63 UniRef50_Q7MFB4 GGDEF family protein n=2 Tax=Vibrio vulnificus R... 244 7e-63 UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geob... 244 8e-63 UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=... 244 9e-63 UniRef50_C6BU46 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 244 1e-62 UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Rose... 244 1e-62 UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 243 1e-62 UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q... 243 2e-62 UniRef50_Q2BLU7 Putative uncharacterized protein n=1 Tax=Neptuni... 243 2e-62 UniRef50_D1C9S7 Serine/threonine protein kinase n=1 Tax=Sphaerob... 243 2e-62 Sequences not found previously or not previously below threshold: UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 269 2e-70 UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms ... 268 5e-70 UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 266 2e-69 UniRef50_Q04NQ1 GGDEF family protein n=7 Tax=Leptospira RepID=Q0... 264 6e-69 UniRef50_D0J6R3 Diguanylate cyclase n=23 Tax=Burkholderiales Rep... 263 1e-68 UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF dom... 263 1e-68 UniRef50_Q2T680 GGDEF domain protein n=32 Tax=Burkholderia RepID... 262 2e-68 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 261 6e-68 UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 261 7e-68 UniRef50_A4VQQ9 GGDEF domain protein n=1 Tax=Pseudomonas stutzer... 261 8e-68 UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 260 9e-68 UniRef50_C0QLY1 Two domain sensory box histidine kinase (PAS/PAC... 259 2e-67 UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 259 3e-67 UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 256 2e-66 UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID... 256 2e-66 UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 256 2e-66 UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 255 3e-66 UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 255 4e-66 UniRef50_D1TJS9 Response regulator receiver protein n=1 Tax=Burk... 254 5e-66 UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=P... 254 7e-66 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 254 8e-66 UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 254 9e-66 UniRef50_Q3JJL8 GGDEF domain protein n=52 Tax=Burkholderia RepID... 253 1e-65 UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 68... 253 1e-65 UniRef50_B7K273 Response regulator receiver modulated diguanylat... 252 2e-65 UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 252 2e-65 UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 252 2e-65 UniRef50_B2SWP1 Diguanylate cyclase n=5 Tax=Burkholderia RepID=B... 252 2e-65 UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswal... 252 2e-65 UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 252 3e-65 UniRef50_C8VWV8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 251 4e-65 UniRef50_Q4KF29 GGDEF domain protein n=2 Tax=Pseudomonas fluores... 251 5e-65 UniRef50_B8FCK6 Response regulator receiver modulated diguanylat... 251 6e-65 UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidima... 251 7e-65 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 250 8e-65 UniRef50_C1A5L7 Putative two-component response regulator n=1 Ta... 250 9e-65 UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein... 250 1e-64 UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacte... 250 1e-64 UniRef50_A9AKV8 Diguanylate cyclase n=24 Tax=Burkholderia RepID=... 250 1e-64 UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 249 2e-64 UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desul... 249 3e-64 UniRef50_Q486E7 Sensory box/GGDEF domain protein n=2 Tax=Proteob... 249 3e-64 UniRef50_C6CQG0 Diguanylate cyclase n=7 Tax=Enterobacteriaceae R... 249 3e-64 UniRef50_Q2RVQ9 Putative diguanylate cyclase (GGDEF domain) n=1 ... 249 3e-64 UniRef50_Q30SV7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 248 3e-64 UniRef50_Q1JWB7 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 247 6e-64 UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitrati... 247 6e-64 UniRef50_A6Q9K1 Signal transduction response regulator n=1 Tax=S... 247 7e-64 UniRef50_B1ZA72 Diguanylate cyclase n=16 Tax=Alphaproteobacteria... 247 8e-64 UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 247 9e-64 UniRef50_Q2BP61 GGDEF/HAMP domain protein n=1 Tax=Neptuniibacter... 247 1e-63 UniRef50_B6BHU8 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 247 1e-63 UniRef50_D1TF13 Response regulator receiver protein n=1 Tax=Burk... 246 1e-63 UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 246 1e-63 UniRef50_Q21HV6 Response regulator receiver modulated diguanylat... 246 2e-63 UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodi... 246 2e-63 UniRef50_C6BW86 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 246 2e-63 UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 2e-63 UniRef50_UPI0001C3940A response regulator receiver modulated dig... 245 2e-63 UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1T... 245 2e-63 UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longb... 245 3e-63 UniRef50_A3Y5H4 Diguanylate cyclase (GGDEF domain) n=1 Tax=Marin... 245 3e-63 UniRef50_A0YTC6 Sensory transduction histidine kinase n=2 Tax=Os... 245 3e-63 UniRef50_A1HS81 Response regulator receiver modulated diguanylat... 245 4e-63 UniRef50_Q30WV4 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 245 4e-63 UniRef50_D2L2K3 Diguanylate cyclase with GAF sensor n=1 Tax=Desu... 245 4e-63 UniRef50_C7LVW7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 4e-63 UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alterom... 245 4e-63 UniRef50_C1SIQ7 Diguanylate cyclase (GGDEF) domain-containing pr... 245 4e-63 UniRef50_Q2SPL3 Response regulator containing a CheY-like receiv... 245 5e-63 UniRef50_C6CKY4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 5e-63 UniRef50_B1KP16 Diguanylate cyclase n=6 Tax=Proteobacteria RepID... 244 5e-63 UniRef50_B8KV43 Sensory box histidine kinase n=1 Tax=gamma prote... 244 5e-63 UniRef50_D2C2R9 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech... 244 6e-63 UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n... 244 7e-63 UniRef50_B8FL29 Response regulator receiver modulated diguanylat... 244 7e-63 UniRef50_A5IAA0 Sensor histidine kinase n=5 Tax=Legionella pneum... 244 7e-63 UniRef50_A1WM32 Diguanylate cyclase n=2 Tax=Burkholderiales RepI... 244 8e-63 UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thioox... 244 9e-63 UniRef50_C6BZS4 Diguanylate cyclase with PAS/PAC and GAF sensors... 244 9e-63 UniRef50_D1U463 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 244 9e-63 UniRef50_Q2IXE2 Response regulator receiver modulated diguanylat... 244 9e-63 UniRef50_D1SRS2 Diguanylate cyclase n=1 Tax=Acidovorax avenae su... 244 9e-63 UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthono... 243 1e-62 UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 243 1e-62 UniRef50_Q2BLA2 Putative uncharacterized protein n=1 Tax=Neptuni... 243 1e-62 UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3... 243 1e-62 UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain prote... 243 1e-62 UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii ... 243 1e-62 UniRef50_A1TXI5 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 243 1e-62 UniRef50_Q1NY46 GGDEF n=2 Tax=delta proteobacterium MLMS-1 RepID... 243 1e-62 UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing pr... 243 1e-62 UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 243 2e-62 UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 243 2e-62 UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein... 243 2e-62 >UniRef50_Q3Z0N3 Cellulose synthesis regulatory protein n=28 Tax=Enterobacteriaceae RepID=YEDQ_SHISS Length = 569 Score = 822 bits (2124), Expect = 0.0, Method: Composition-based stats. Identities = 558/564 (98%), Positives = 562/564 (99%) Query: 1 MQHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHL 60 +QHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHL Sbjct: 6 VQHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHL 65 Query: 61 ENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNR 120 ENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLR+AVTEFEQHRDEHAW+IELNR Sbjct: 66 ENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRNAVTEFEQHRDEHAWQIELNR 125 Query: 121 RRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRA 180 RRTL VNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHN+SSMVEQAMYVSRA Sbjct: 126 RRTLSVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNTSSMVEQAMYVSRA 185 Query: 181 GFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV 240 GFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV Sbjct: 186 GFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV 245 Query: 241 SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGN 300 SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGN Sbjct: 246 SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGN 305 Query: 301 IFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI 360 IFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI Sbjct: 306 IFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI 365 Query: 361 ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA 420 ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA Sbjct: 366 ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA 425 Query: 421 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE Sbjct: 426 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 485 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 540 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ Sbjct: 486 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 545 Query: 541 SLADRRLYLAKQAGRNRVFASDNA 564 SLADRRLYLAKQAGRNRV ASDNA Sbjct: 546 SLADRRLYLAKQAGRNRVCASDNA 569 >UniRef50_Q5PLI4 Cellulose synthesis regulatory protein n=77 Tax=Enterobacteriaceae RepID=YEDQ_SALPA Length = 570 Score = 737 bits (1904), Expect = 0.0, Method: Composition-based stats. Identities = 370/562 (65%), Positives = 466/562 (82%) Query: 1 MQHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHL 60 M HET ++NQ W KKLARR GPGHVVN CF++V+LFSTLLTWREV++L+DAY++SQRNHL Sbjct: 1 MPHETLLDNQGWFKKLARRFGPGHVVNTCFLIVMLFSTLLTWREVMILKDAYVASQRNHL 60 Query: 61 ENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNR 120 +VAN LD+ LQ+N+D+LIFLRNGM EALVAPL F++L+ AVT+FEQ R H W++EL++ Sbjct: 61 GSVANVLDRQLQFNMDRLIFLRNGMHEALVAPLAFSALQSAVTQFEQRRVRHFWQLELDK 120 Query: 121 RRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRA 180 RRTLP+ GVSD V+ LLSRE+ L NE+TA LE+GYL RLA +S+ + + MYVSR+ Sbjct: 121 RRTLPLYGVSDQFVARTTLLSRESRDLANELTATLELGYLARLARSSAMLTLETMYVSRS 180 Query: 181 GFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV 240 GFY+ST PT + ++ +RYY YVTQPWFI SQR N R VRWFTS + ++ + +VT Sbjct: 181 GFYLSTLPTAYGSDIVSRYYQYVTQPWFIEQSQRRNPQRGVRWFTSAQPYVTDEQKKVTA 240 Query: 241 SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGN 300 S+P+D +NYWYGVL M IPV ++Q+FLR+A +K+++GEYQLYD+ LR LT S P+ T N Sbjct: 241 SLPLDHDNYWYGVLAMDIPVASLQRFLRDAAEKDIEGEYQLYDNHLRLLTDSAPEQQTAN 300 Query: 301 IFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI 360 + RE ALLA+ +E DT GG+R+ + YVSWERLDHFDGVL+RVHTL EG++G+FGSISI Sbjct: 301 TLNDRERALLAREIEKDTLGGLRLGTHYVSWERLDHFDGVLLRVHTLREGIQGNFGSISI 360 Query: 361 ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA 420 ALTLLW LFT MLLISW VIR +V NM+VLQ+SLQWQAWHD LTRLYNRGALFEKA LA Sbjct: 361 ALTLLWVLFTAMLLISWGVIRHIVKNMFVLQNSLQWQAWHDPLTRLYNRGALFEKASRLA 420 Query: 421 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 K + + PFSVIQ+DLD+FK++NDRFGHQAGDRVLSHAAGLI S++RA D+AGRVGGEE Sbjct: 421 KRYREARQPFSVIQLDLDYFKSVNDRFGHQAGDRVLSHAAGLIGSTIRAHDIAGRVGGEE 480 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 540 FC++LPGA+ +A ++AERIR ++N+KE+L+ KSTT+RISAS+G+SS+EE GDYDFEQLQ Sbjct: 481 FCIVLPGATKAQALQIAERIRQRINDKEILVTKSTTLRISASMGISSAEEYGDYDFEQLQ 540 Query: 541 SLADRRLYLAKQAGRNRVFASD 562 SLAD+RLY AKQ+GRNR+ ASD Sbjct: 541 SLADKRLYYAKQSGRNRICASD 562 >UniRef50_C8QGL2 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b RepID=C8QGL2_9ENTR Length = 550 Score = 617 bits (1592), Expect = e-175, Method: Composition-based stats. Identities = 219/549 (39%), Positives = 320/549 (58%), Gaps = 6/549 (1%) Query: 16 LARRLG-PGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANALDKHLQYN 74 L R+ G P V+LCF+ V LFS LT E + L+ +Y QR L + LD Q + Sbjct: 6 LPRQSGNPFLPVHLCFLAVFLFSAFLTVHEALELKTSYEDRQRAQLAEIQKNLDSQFQES 65 Query: 75 VDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALV 134 VD+L++ + + AL+ PLD + R+AV F+ R W+++LN R++P+NGV DA + Sbjct: 66 VDELVYYQKMLSYALMHPLDSDNAREAVQRFQTLRQRPLWQLQLNSPRSMPLNGVGDAWL 125 Query: 135 SEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRN 194 + LL R++ +D EI AALE ++++ + + Y+SRAGFY+S++P + Sbjct: 126 ARDPLLKRDSALIDQEIRAALEFSFIMQFSDPDHDFHSRFWYISRAGFYISSRPPQSPQE 185 Query: 195 VPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVL 254 + Y V + +F ++N +RW TS + + +T+S P+ SN YWYGVL Sbjct: 186 LEQSYATMVQRAYFRALDPQQNISPQLRW-TSGYQGLFDEGLMLTLSAPIISNGYWYGVL 244 Query: 255 GMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSN-PDHPTGNIFDPRELALLAQA 313 M P ++ L L G D K+ +T + PD N +E L Sbjct: 245 SMDFPQARIRNLLAETRHTLLQGNLVFLDRKMNEVTRLHAPDEIPLNAEHRQE---LLNR 301 Query: 314 MEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTML 373 M+H+ G +R+ +++ SW +L + DG ++ V TL +G++ + G +++ L +W LF ML Sbjct: 302 MQHERSGILRLGTQFASWSKLTNVDGYIINVQTLKQGMKQELGRVTLFLLSMWLLFILML 361 Query: 374 LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 ++ VI R+V L L W+A +D LTRL NR A FE+ A CQ Q P SVI Sbjct: 362 AVAHQVIFRLVRRQDELSERLTWRANYDGLTRLLNRSAFFEQFVAQAAHCQQLQRPLSVI 421 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEA 493 Q+D+DHFK +ND +GH AGD+ L A +IS +LR DVAGR+GGEEFC++LP +L EA Sbjct: 422 QLDVDHFKKVNDTWGHHAGDQALIRVASVISHTLRKYDVAGRIGGEEFCIVLPETTLAEA 481 Query: 494 AEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 + VAERIR +L K +L+ STT I+ S GV+SSEE GDYD E LQ+ AD RLYLAK Sbjct: 482 SAVAERIRARLAAKTILVNASTTFNITLSAGVTSSEEQGDYDAESLQAKADSRLYLAKTN 541 Query: 554 GRNRVFASD 562 GRNRV ++D Sbjct: 542 GRNRVCSAD 550 >UniRef50_C9XVB6 Cellulose synthesis regulatory protein n=9 Tax=Enterobacteriaceae RepID=C9XVB6_CROTZ Length = 524 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 259/522 (49%), Positives = 353/522 (67%), Gaps = 3/522 (0%) Query: 40 LTWREVVVLEDAYISSQRNHLENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLR 99 +TWRE V+L+DA+ISSQRN L+++A A+D++LQY+VDKL+F R GMR A+ L+ Sbjct: 1 MTWREGVILQDAFISSQRNQLDSIATAMDRNLQYSVDKLLFYRAGMRYAMHNLLEGPQTD 60 Query: 100 DAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGY 159 + F R + W + R + GVSDA +++ LL R+ L NE+ A L +G+ Sbjct: 61 AVMAGFNADRHKREWMLPTGRDLAPEIQGVSDAFIAQSTLLERDEALLYNELNATLALGH 120 Query: 160 LLRLAHNSSSMVE-QAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRH 218 +L +A S E + YVSRAGFY++ P ++P YY V+ WF+ S R N Sbjct: 121 MLSIADARSERPEVRTFYVSRAGFYLTNLPFFGHGSIPELYYQQVSSRWFLDQSLRRNPG 180 Query: 219 RAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAI-DKNLDG 277 R VRW + + + + +VT S+P+D N W+GVL M P+ M+ FL+NA+ D + G Sbjct: 181 RGVRWLHGR-DLSMPSGQRVTASIPLDDNGRWFGVLAMDFPIPAMRDFLQNALNDDDSGG 239 Query: 278 EYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHF 337 E L+D +L +T+++ + T F ++ A LA+ ME G RMD+R+++W +LD+F Sbjct: 240 EILLFDRQLSPITTTSSRNDTALHFTAQDKAALARQMELANEGDARMDTRFIAWAKLDYF 299 Query: 338 DGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQ 397 DGVLV+V T+S+ G FG +++ L LLW LFT ML ISW VI MV NM +Q SL+W+ Sbjct: 300 DGVLVKVTTVSQSAEGKFGKVAMVLGLLWLLFTAMLFISWRVIVGMVRNMLTMQRSLKWR 359 Query: 398 AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLS 457 AW+DTLTRLYNRGA FE+AR AK C Q PFSVIQ+DLDHFK+INDR+GHQAGD+VL+ Sbjct: 360 AWYDTLTRLYNRGAFFERARLAAKTCDAQQAPFSVIQLDLDHFKSINDRYGHQAGDKVLT 419 Query: 458 HAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTI 517 AAG++S SLRA+D+AGRVGGEEFC+ILPG A +VAERIR ++N +E+L+ TTI Sbjct: 420 WAAGMLSRSLRAEDIAGRVGGEEFCIILPGTPSEGARQVAERIRQRINSQEILVRPDTTI 479 Query: 518 RISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 RIS S+G+S + GDYDFE LQS+ADRRLYLAKQ GRN V Sbjct: 480 RISVSVGISEALRDGDYDFEHLQSIADRRLYLAKQRGRNLVC 521 >UniRef50_Q1LHF7 Diguanylate cyclase (GGDEF domain) n=2 Tax=cellular organisms RepID=Q1LHF7_RALME Length = 587 Score = 530 bits (1365), Expect = e-149, Method: Composition-based stats. Identities = 149/582 (25%), Positives = 263/582 (45%), Gaps = 32/582 (5%) Query: 1 MQHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHL 60 M + WL + A + P VV + F + +L ++ R++ +L + + ++ L Sbjct: 1 MAWHKLLPRPRWLPRAAL-IYPQRVVVVGFGLAMLLMLVVAMRDLYLLRERVLILHQHDL 59 Query: 61 ENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEF-EQHRDEHAWKIELN 119 A + + KL F+R+ ++ L + D E R+E W++++ Sbjct: 60 VLRALGAEAVINAERFKLSFVRDYAQQLLELQQGTKASTDGDIERAYAARNEPVWELQVP 119 Query: 120 RRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSR 179 P+ GVS ++ R +E L ++ AA ++ ++L ++ S ++S Sbjct: 120 LGDA-PIVGVSPQILKGLQGFERRDEDLRADLLAARQLSHVLGVSQRSDRPDGTVTFISS 178 Query: 180 AGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVT 239 GFYV T P L P + ++ + +RW + S T+ + T Sbjct: 179 NGFYV-TYPALPPDRAPALIKRFSGIDYYRSLLPDRDPSHEMRWAQVYTQFES-TQLRTT 236 Query: 240 VSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSN------ 293 +SVPV + GV+ + + +R ++ + + + L L D + SS Sbjct: 237 LSVPVYVAQRFRGVVAVDLEIRRLRDLI--GLPEILGSHRYLLDRNGNVIVSSQTGGKTN 294 Query: 294 ---PDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSE- 349 PD G++ + L++Q G ++ +YV ++R+ + G + V TL E Sbjct: 295 LRWPDDFAGDLRNTPVSDLISQGT-----GMRHVNGQYVYFQRVGNA-GNWLMVDTLDEY 348 Query: 350 -GVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYN 408 +S+ L +W L ++ ++ V+ + + LQ A D LT+L N Sbjct: 349 DVYATVARRLSLPLLTIWFLLPVLMYVTLRVVTLLFDHYLAAGRKLQQMAETDPLTQLAN 408 Query: 409 RGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLR 468 R E+ + Q P +++ +D+D+FK +ND++GH +GD VL A L+ LR Sbjct: 409 RRRFSEQFKKETARRQRDGTPLAMLMLDIDYFKRVNDKWGHASGDCVLMAMADLMRKHLR 468 Query: 469 AQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLN--------EKEMLIAKSTTIRIS 520 D R+GGEEF V+LPGAS EA AER+RL + + IR + Sbjct: 469 EIDFPARLGGEEFAVLLPGASSDEAVAAAERLRLAVEAAFVEAAPDAPQPDTGDGRIRFT 528 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 S+GV+ + G + + ++ADRRLY+AK+AGRNRV A+D Sbjct: 529 VSIGVAEAGTDGCQTLDAMLAVADRRLYVAKEAGRNRVCATD 570 >UniRef50_Q46VS6 GGDEF n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46VS6_RALEJ Length = 584 Score = 522 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 151/579 (26%), Positives = 267/579 (46%), Gaps = 31/579 (5%) Query: 7 MENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANA 66 + WL +LA + P VV CF VVLL + ++ R+V ++ + + +++++LE A Sbjct: 6 LPQPRWLPRLAV-MRPHRVVVGCFAVVLLLALVVGLRDVYLVRERDLRARQHNLELRALG 64 Query: 67 LDKHLQYNVDKLIFLRNGMREA--LVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTL 124 ++ L+ +L +L + A D + A+ + R+ W+++L Sbjct: 65 VEAVLEGERRRLEYLSTYAERLFEIQASADAVAPDAAIRQAYAQRNATVWQMKLPL-DGP 123 Query: 125 PVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYV 184 + GV A ++ R + L ++ + LL L+ + + A+++S GF+V Sbjct: 124 ALIGVGPAGLTGLRSFDRRDPDLMADLYVGRMISELLGLSIRADHVQGNAIFISSNGFFV 183 Query: 185 STQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV 244 + P + P+ + + P++ G + N R + W + S T+SVP+ Sbjct: 184 A-YPAIDPAVAPSMMQRFDSMPYYRGQTPEVNPGRELYWVPMYDDFQSKRR-MTTLSVPI 241 Query: 245 DSNNYWYGVLGMSIPVRTMQQFLRNAIDK-------NLDGEY-QLYDSKLRFLTSSNPDH 296 + + GV+ + + + + + LR A D N G+ + D +R + PD Sbjct: 242 YAGQQFRGVVAIDVEQKRLDELLRAASDPGAVQYMMNAHGDVLAISDDPVRKVQKW-PDA 300 Query: 297 PTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFG 356 GN D L A+ G ++ D Y+ + R +L+ + + F Sbjct: 301 VPGNWKDFAPADLFARG-----SGMVKHDGDYLLFHRAPQSPWLLMDLVPARKLYASMFA 355 Query: 357 SISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKA 416 S+S L ++W L +L I+ V+ ++ + L LQ A D LT L NR + E A Sbjct: 356 SMSRPLLMIWVLLPLLLWITLKVVTQLFDHYIALGEKLQEIARQDPLTGLANRRRMRELA 415 Query: 417 RPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRV 476 + + + P +++ +D+D FK +ND +GH +GD+VL A + ++LR D R+ Sbjct: 416 QSEFERQKRDGQPLALVMIDIDFFKKVNDHWGHASGDKVLVELARTMRANLRNVDQPARL 475 Query: 477 GGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA-------KSTTIRISASLGVSSSE 529 GGEEF V++P SL EAA+ AER+R + + IR + S+GV+ + Sbjct: 476 GGEEFAVLMPNTSLAEAAQSAERLRRAIAACVVEADLEACVERADRIIRFTISVGVAEAR 535 Query: 530 ETG----DYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 + L ++ADRRLY AK GRNRV + DNA Sbjct: 536 GEAADGVPMTLDGLAAIADRRLYDAKTQGRNRVVSDDNA 574 >UniRef50_Q1LM75 Diguanylate cyclase (GGDEF domain) n=2 Tax=Cupriavidus RepID=Q1LM75_RALME Length = 586 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 149/567 (26%), Positives = 247/567 (43%), Gaps = 38/567 (6%) Query: 12 WLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANALDKHL 71 WL + R P + + F +L LL +R +++ DA I S R A +++ L Sbjct: 21 WLALIRR---PRRFILIAFSAAILLILLLIFRGMMLSRDAEIESVRQMQAVRAVSINALL 77 Query: 72 QYNVDKLIFLRNGMREALVAPLDFTSL--RDAVTEFEQHRDEHAWKIELNRRRTLPVNGV 129 Q ++L +RN + + +L D T FE HR++ W L R PV GV Sbjct: 78 QLEAERLTNIRNYAEHLMQIQDELPALFAHDIQTAFE-HRNDDVWA--LRTRDAAPVFGV 134 Query: 130 SDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPT 189 S A ++ + R++ L + A+ + ++ HN + E+ YVS G V+ P Sbjct: 135 SAAQLTGLDGFLRDDAKLIPSMAVAIALSHMFSAGHNEPGLRERIAYVSGNGIIVA-YPA 193 Query: 190 LFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNY 249 + ++V + +F + N R +W ++ E + +S PV + N Sbjct: 194 ISEQDVNPTLRSLASAAYFRNNLPLANPTRKQQWSIAR-SMDDIGESSLFLSAPVYAGNA 252 Query: 250 WYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIF------- 302 + VL + IP ++ + L A +++ L D + +S + G Sbjct: 253 FKAVLILEIPRHSLDESLNVAPHHDVNN--YLVDHNGALVGASMRNVHRGESLASVLINK 310 Query: 303 ---DPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDF---- 355 D +A + A G R+ R + L D V R + R Sbjct: 311 WPADKLAVAFRSDAGILSNEHGSRLIYRKLGNSGLIMVDEVSTRELLQASVARLSGAIGA 370 Query: 356 GSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEK 415 G++++ L L + L L Y+ R +L+ A D LT L NR + Sbjct: 371 GAVALGLLLCFTLAIVHTLFGHYIARG---------EALRTLAETDALTGLANRRVFASR 421 Query: 416 ARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGR 475 C+ P S+I +D+D FK INDR+GH +GD VL A + +++R D+ R Sbjct: 422 FADAYAWCKRDAVPVSLIMLDIDRFKKINDRWGHASGDVVLRTLADALRANVRNVDLPAR 481 Query: 476 VGGEEFCVILPGASLTEAAEVAERIRLKLNE---KEMLIAKSTTIRISASLGVSSSEETG 532 +GGEEF V+LP + +AA +AE++RL L + + + +IR +AS GV+ Sbjct: 482 LGGEEFAVLLPRTGIADAANLAEKLRLALQALVCEPVDSDDTASIRFTASFGVAQIAPDE 541 Query: 533 DYDFEQLQSLADRRLYLAKQAGRNRVF 559 + + L +AD+RLY AK GRN+V Sbjct: 542 PGNLDSLLMVADQRLYAAKAGGRNKVV 568 >UniRef50_C0QM24 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM24_DESAH Length = 488 Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats. Identities = 94/364 (25%), Positives = 154/364 (42%), Gaps = 22/364 (6%) Query: 200 YGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDS-NNYWYGVLGMSI 258 + Q +F + P+ A+ + ++ V + + G G+ + Sbjct: 128 QEFRDQWYFRIKDLDTD-----YEINLDPDMANQDTMTIFINHKVYDYDGNYIGATGVGL 182 Query: 259 PVRTMQQFLRNAIDKNLDGEYQLYDSKLRF-LTSSNPDHPTGNIFDPRELALLAQAMEHD 317 + +++ + N + + D + L N P NIF+ +E+A Q + Sbjct: 183 AIHAVKKMV-NTYQERYNRTIFFTDKEGNITLHGQNFSKPVKNIFEVKEIAEHRQEIHAG 241 Query: 318 TRGGIRMDSR----YVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTML 373 + + YV+ + F L GD + TL+ L + Sbjct: 242 SPLSFQYKKDNKNIYVNNRYIPEFGWYLFVEQC------GDKAIAKVRNTLVLNLVFSFG 295 Query: 374 LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 +I +I ++ + Q L A D LT +YNR A K Q Q P S+I Sbjct: 296 IIGLILIVTNLT-IASFQKRLTKMASTDKLTGVYNRRAFDIIIDQTLKEIQRKQTPLSII 354 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEA 493 DLDHFK +ND +GH AGD ++ G + ++R D+ R GGEEF ++L G L +A Sbjct: 355 LFDLDHFKRVNDTYGHLAGDYIIQTTVGTAARTIRNSDILCRWGGEEFLILLKGCDLGDA 414 Query: 494 AEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 + AE+IR + + I ++ S+GV+ E TG E L AD+ LYLAK + Sbjct: 415 MKTAEKIRTAVASQPARYGDDQ-ICVTISVGVT--EHTGQDTKETLLKRADKALYLAKAS 471 Query: 554 GRNR 557 G+NR Sbjct: 472 GKNR 475 >UniRef50_C7HYK2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomonas intermedia K12 RepID=C7HYK2_THIIN Length = 780 Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats. Identities = 104/355 (29%), Positives = 159/355 (44%), Gaps = 46/355 (12%) Query: 234 TEPQVTVSVPVDSNNY---W--------YGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLY 282 +PQ+ ++VPV+ N++ W Y + GMSI + +L Sbjct: 190 GQPQLLIAVPVELNDFLERWRRSVAAAEYAMPGMSIALMRADGYLLA------------- 236 Query: 283 DSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGI------RMD----SRYVSWE 332 R+ D P + + LA+A H G R+D R +W Sbjct: 237 ----RWPAPKTDDLP--RFYSAKRQGELARAARHAPDGATSGVFSGRVDSDDIPRLGAWV 290 Query: 333 RLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIR----RMVSNMY 388 RL H+D VLV + + DF + AL+ +L +++ ++R R + + Sbjct: 291 RLPHYD-VLVNMTVPRALIWRDFWRAYWPALTILALWLAVLTLAYRLVRKQAERDSAQLR 349 Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 + A D+LT L NR + E + + H ++++ DLDHFK IND FG Sbjct: 350 DRSEIMYRLANQDSLTGLLNRRGMGEYLQRAHDRARDHGIGYALVLFDLDHFKLINDGFG 409 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H AGD VL A L+ + +R +D R GGEEF V+LP +SL A AE++R ++ Sbjct: 410 HAAGDAVLQQVAHLLQTRVRKEDQVARWGGEEFLVLLPDSSLQTAHATAEKLRELISHTR 469 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 M + +R++AS GVS+ E G +L D LY AK GRNRV + Sbjct: 470 MSVG-GAELRLTASFGVSAWEPGGPLASAELLGQCDSALYNAKAGGRNRVKQFEG 523 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 277 bits (708), Expect = 9e-73, Method: Composition-based stats. Identities = 67/179 (37%), Positives = 103/179 (57%), Gaps = 1/179 (0%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 ++ L+ L+ QA D LT + NR E+A + + P S +D+D FK Sbjct: 412 DITERKQLEEELKRQARIDFLTGVSNRRYFMEQAEQEIQRTSRYDTPLSFFMLDIDLFKQ 471 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 +ND +GH++GD VL A + +LR D+ GRVGGEEF ++LP +AAEVAER+R Sbjct: 472 VNDTYGHKSGDIVLKRMASVCRETLREIDIIGRVGGEEFAILLPETDKAQAAEVAERLRS 531 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 L ++++ I+ + S+GV+S + D + + L +LAD LY AK+ GRNRV+ + Sbjct: 532 VLADEKVPTEAGAPIQFTVSIGVASRVSSQD-NIDMLLNLADEALYQAKKYGRNRVYIA 589 >UniRef50_Q0EXC8 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXC8_9PROT Length = 615 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 111/434 (25%), Positives = 176/434 (40%), Gaps = 40/434 (9%) Query: 143 ENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGY 202 E + +D+ +LE+G++ S + ++ V ++ Sbjct: 210 ELDLVDHTANTSLELGHIFGYTSQESEWSFK--------LFLEHVLPEDRSEVSRLFHEA 261 Query: 203 VTQ--PWFIGHSQRENRHRAVRWFTSQPEH--ASNTEPQVTVSVPVDSNNYWYGVLGMSI 258 + + W R +RW T + H S Q + + D V + Sbjct: 262 IARQTDWHCECRIRRTDG-ELRWITVRGRHWHDSEGVVQRMIGIVQDITERKLAVQAVIA 320 Query: 259 PVRTMQQFLRNAID----KNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAM 314 R + + + D + G Y +R L P G P EL A+A Sbjct: 321 SERRFRNLVESLSDWVWEVDEQGRYIYCSPNVRDLLGYEPAELIG--KSPLELMPAAEAA 378 Query: 315 EHDTRGGIRMDSRYVSWERLD---HFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTT 371 G + R + ++ H DG V + T V G+ Sbjct: 379 RVAEIFGTALSERSHLKDLVNINLHKDGHEVVMETSGAPVVDADGT-------------- 424 Query: 372 MLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFS 431 + I R +++ L+ L+ QA D LT L NR FE A + H + FS Sbjct: 425 --FRGYRGIDRDITDRKELERELESQARTDVLTGLNNRRYFFELAELELARAKRHGNQFS 482 Query: 432 VIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLT 491 ++ +D+DHFK ND +GH GDRVL + + +LR D++GR+GGEEF ++LP Sbjct: 483 LLMLDVDHFKLFNDSYGHHIGDRVLQKLSEVCMHTLREIDLSGRIGGEEFAIMLPETRGD 542 Query: 492 EAAEVAERIRLKLNEKEMLIAKSTT-IRISASLGVSSSEETGDYDFEQLQSLADRRLYLA 550 A EVAER+RL + +L+ + +T + + S+GV+S G + L AD LY A Sbjct: 543 RAMEVAERLRLAIAGAPVLLEQQSTFVHFTVSIGVTSLVAAGRQ-VDDLLKRADDALYAA 601 Query: 551 KQAGRNRVFASDNA 564 K AGRN+V D + Sbjct: 602 KNAGRNQVCKKDES 615 >UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY29_9AQUI Length = 336 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 96/324 (29%), Positives = 155/324 (47%), Gaps = 20/324 (6%) Query: 245 DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDP 304 + W G+L M + A + G+Y + T ++ IF+P Sbjct: 22 YEKDNWKGILDMVAELFEADG----AAIGEVRGDYL-------YYTKASSTIADSGIFNP 70 Query: 305 RELALLA--QAMEHDTRGGIRMDSRYVSWER-LDHFDGVLVRVHTLS-EGVRGDFGSISI 360 E + A E + G + Y +ER ++ + + +R ++ G + FGS+S+ Sbjct: 71 EEFRVPVWWSAFEEASDRGYILIEDYQRYERAVESWKKIGLRSKLVAILGDKEPFGSLSV 130 Query: 361 ALTLLWALFT---TMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKAR 417 + FT +L S I + + + L +A D LT LYNR L E Sbjct: 131 GRVMSSKPFTEEDGKILRSLAFIFSFIVKEELEKKRLLEKAIIDHLTGLYNRFYLEEAGA 190 Query: 418 PLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVG 477 + + P S+I DLD+FK +ND +GHQ GDRVL A ++SS++R+ D+ R G Sbjct: 191 REIARAKRYGFPISLIMFDLDNFKQVNDTYGHQVGDRVLVKFASIVSSNVRSTDMPVRYG 250 Query: 478 GEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFE 537 GEEF V+LP EA +VAERIR + EK + + +R++ S G+S +G+ Sbjct: 251 GEEFVVLLPHTYPEEAVKVAERIREEF-EKFLFRFEGEVMRLTVSAGISFCN-SGECSLG 308 Query: 538 QLQSLADRRLYLAKQAGRNRVFAS 561 +L +AD+ +Y AK+ G+NR+ Sbjct: 309 ELIQMADKAMYEAKEKGKNRIEVF 332 >UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0X5_DESAD Length = 779 Score = 274 bits (700), Expect = 7e-72, Method: Composition-based stats. Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 11/297 (3%) Query: 264 QQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIR 323 ++ + +I ++ L D K + NP IF R +L ++++ Sbjct: 480 REDMLQSISDSVQDALVLMDEKG-LVHFWNP--AAEKIFGYRADEMLGESLQCCFHAEDN 536 Query: 324 MDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVI--R 381 + + ++ DG+L + + VR G + A LL L W+V+ Sbjct: 537 LLPENLGNTD-NYIDGLLSSYGSFTVNVRRKGGDVFPAEVLLSPLRKDD---QWWVVGTF 592 Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 R V+ + L+ A D+LT L NR E A + + + S++ +D+D+FK Sbjct: 593 RDVTERKEAEDKLRKLATTDSLTGLSNRRFFMESAEDALERTRRYGRDLSLLMMDIDYFK 652 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 +ND +GH AGD VL + LR DV GR+GGEEF ++LP L A VAER+R Sbjct: 653 TVNDMYGHDAGDDVLKGLSKTGLKILRNIDVFGRIGGEEFSILLPDTGLDGATLVAERLR 712 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 ++ E + +S ++ I+ S+GV++ E EQL AD LY AK+AGRN+V Sbjct: 713 AEI-ETTKMNTRSGSLNITVSIGVATYSEH-TKTLEQLLKAADIGLYAAKEAGRNQV 767 >UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA9_METML Length = 548 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 70/178 (39%), Positives = 105/178 (58%), Gaps = 1/178 (0%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 + + +L+ L +A D LT L NRG E+A Q +Q ++ +D+D FK I Sbjct: 371 IHSRKLLELELNQKAHIDYLTELNNRGHFMEQAEKELSRSQRYQKDMAMFMMDIDFFKKI 430 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND GH+ GD VL A + +LR D+ GR+GGEEF ++LP + EA EVAER+RL Sbjct: 431 NDSHGHKIGDIVLKKLADVCRQTLREVDIIGRIGGEEFAILLPETNRAEALEVAERLRLA 490 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + + ++ + ++ + S+GVSS + D + + L S AD+ LY AKQ+GRNRV A+ Sbjct: 491 VADSKVPMKDGLPVQYTVSIGVSSV-ASADDNIDMLLSRADQALYQAKQSGRNRVCAA 547 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 116/513 (22%), Positives = 190/513 (37%), Gaps = 54/513 (10%) Query: 80 FLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNL 139 FL + REAL L + FE D + PV G D V + + Sbjct: 562 FLSDKRREALRTILSQVMEQAGPVRFEGEHDGRRFHAS-----AYPVTGP-DGAVEQMAV 615 Query: 140 LSRE-------NESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQ----- 187 +R+ +L +V + + + +V+ F + Sbjct: 616 FARDVTEQRKAQAALKRSEQRFRDVSAAVGEYIWETDGRDTFTFVTEDVFSILGYTQEEM 675 Query: 188 ----PTLFTRNVPTRYYGYVTQPWFIGHSQ-----RENRHRAVR--WFTSQ--PEHASNT 234 P LF T + + S R R W S P Sbjct: 676 LGQTPALFVAREHTEDFLRWRADLYRLQSPFSKVELRCLTRDGRAIWLQSSGVPHFDDEG 735 Query: 235 EPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDK----NLDGEYQLYDSKLRFLT 290 + +D + + R ++ +A D ++ G ++ L Sbjct: 736 GFRGYRGADMDITDRKDAENAIKASERKLRALAESAYDAIVMIDMHGNASFWNRAAERLF 795 Query: 291 SSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEG 350 + G P + + + G+R + DG V +E Sbjct: 796 GYTEEEVMGR---PIHELITPPELRDEAMAGMR--------QFAGSGDGDAVGAIQETEA 844 Query: 351 VRGDFGSISIALTLLWALFTTMLLISWYVIR--RMVSNMYVLQSSLQWQAWHDTLTRLYN 408 +R D +S+ ++ + L WY + R ++ ++ L A D+LT L+N Sbjct: 845 LRKDGTRVSVER----SVSSFQLGGRWYAVATIRDITERKATEARLHELATTDSLTGLFN 900 Query: 409 RGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLR 468 R E A + +Q +++ +D+DHFK +ND GH GD VL A + ++LR Sbjct: 901 RRRFMELAEREFMRTKRYQGALTMLMMDIDHFKRVNDTHGHGVGDEVLRELARISRTALR 960 Query: 469 AQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSS 528 D+ GR+GGEEF V+LP A EVA+R+R + + M T+RI+ S+G ++S Sbjct: 961 ELDILGRLGGEEFGVLLPETDAGPAMEVAQRLRRAIEKASMATDAG-TLRITVSIGAATS 1019 Query: 529 EETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + E L AD LY AKQ+GRN+V A Sbjct: 1020 NNDAE-TVETLLKRADVALYEAKQSGRNKVVAG 1051 >UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GCU4_GEOUR Length = 422 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 77/228 (33%), Positives = 116/228 (50%), Gaps = 2/228 (0%) Query: 333 RLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQS 392 ++ G L + +R + + +L I++++ R+V N+ + Q Sbjct: 196 KIGSVMGALSVTIPVVTLIRETDTDKLMIVAATIGTIGLLLGITYFLTWRLVLNLDMAQK 255 Query: 393 SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAG 452 L+ A D LT L NR + ++ + P +I +DLDHFK IND +GH G Sbjct: 256 HLKRLASTDELTGLKNRRQIMKRLDEEYQRAIRLGEPLCLIMLDLDHFKKINDTYGHPFG 315 Query: 453 DRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA 512 D VL AG + +LR DV GR+GGEEF ++ PG + EA +A+R+R + E E + Sbjct: 316 DLVLKCVAGHMKKALRRYDVLGRIGGEEFLIVSPGTTREEAVVLAQRLRSTV-EMEKIAY 374 Query: 513 KSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + + I+ S GV+ GD + E L AD LY+AKQ GRNRV A Sbjct: 375 EDKKVTITVSCGVA-FLYKGDDNVEILLKRADSALYIAKQEGRNRVVA 421 >UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7QLL5_CYAP0 Length = 494 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 120/246 (48%), Gaps = 7/246 (2%) Query: 318 TRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGD-FGSISIALTLLWALFTTMLLIS 376 RG + + S H + ++V + + V G G + T+ L L++ Sbjct: 242 RRGQTHLMNTAYSELACQHLEPLIVESYCIPLIVEGKPMGIFHLGSTIPGKLTEVKQLLA 301 Query: 377 WYVIRRMVSNMYVLQ--SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQ 434 V R + + ++ +L+ Q D LT LYNR L E + + + + +I Sbjct: 302 TNVTRHISLALANIKLCETLKQQNIRDALTGLYNRRYLEESLKKELERAKRKERSLGIIM 361 Query: 435 VDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAA 494 +D+DHFK +ND FGH GD+VL G + +R D+A R GGEE +ILP ASL Sbjct: 362 IDVDHFKNVNDTFGHDKGDQVLKKLGGFLQRHIRGSDIACRYGGEELTLILPEASLENTR 421 Query: 495 EVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAG 554 + AE++R + ++ + T ++ S+G++ E G Y + L AD+ LY AKQ G Sbjct: 422 QRAEQLRQAVKNLDLDLCDHT---LTISVGIACFPEHG-YSGKALLKTADQALYQAKQQG 477 Query: 555 RNRVFA 560 R+RV Sbjct: 478 RDRVIC 483 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 63/188 (33%), Positives = 101/188 (53%), Gaps = 3/188 (1%) Query: 374 LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 + + Y+ + V++ + + L A D LT ++NR L + + + + H +P S++ Sbjct: 115 ISAIYITVQDVTDFVIYEHKLIQMAKVDGLTGVFNRRYLDTRLQEELERSRRHGNPLSIM 174 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEA 493 +D+DHFK IND GH GD L + L+ +R D+ GR GGEEFC ILP S +A Sbjct: 175 MLDIDHFKEINDTHGHICGDYTLRKISELLLELVRTSDILGRYGGEEFCCILPETSFEQA 234 Query: 494 AEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 +AER R ++ + + R++ S+GV+ + D + + AD LY AK+ Sbjct: 235 LVLAERCRTQVAASQFSCTDHQS-RVTVSIGVT--DLHRDDTLDSIIKRADDALYQAKRT 291 Query: 554 GRNRVFAS 561 GRNRV +S Sbjct: 292 GRNRVCSS 299 >UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X290_DESRD Length = 769 Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 115/436 (26%), Positives = 181/436 (41%), Gaps = 26/436 (5%) Query: 138 NLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPT 197 L +RE E +++ L V L ++ + ++ S + P T Sbjct: 339 TLNTREQELRESQERLNLTVNS-AGLGLWDWNLRQGTIFSSSRCSEILDFP---PYEATT 394 Query: 198 RYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMS 257 R + + RE R +R E TE Q+ + W V G Sbjct: 395 RITQWSRRIHPRD---REEVKRRLRAHLLGQEDTFETEFQIQTRDNIW---RWVWVCGRI 448 Query: 258 IPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLT---SSNP------DHPTGNIFDPRELA 308 + + LR + + + KLR LT + NP D + Sbjct: 449 VESDAQDRPLRMTGTALDIAKRKTVEEKLRTLTLAVAQNPVPILITDEVGRLEYANPAYL 508 Query: 309 LLAQAMEHDTRGGI--RMDSRYVSWERLDHFDGVLVRVHTLSEGVRG--DFGSISIALTL 364 L + ++ R G+ + ++ + HF VL ++ G + T Sbjct: 509 ELTELTTNEVRAGLEAKAGPHFIDGSFIRHFHQVLFSKGHWQGELQNVTKSGRVFWEFTS 568 Query: 365 LWALFTTMLLISWYV-IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLC 423 + L ++ YV +R+ V+ +S L+ A D+LT ++NR FE A + Sbjct: 569 ISPLQNEKGEVTHYVAVRKEVTAQKQAESKLRELATRDSLTGVWNRRYFFELAARELESA 628 Query: 424 QTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCV 483 Q ++HP S+I D+DHFK IND +GH GD VL L+ ++LR D+ RVGGEEF V Sbjct: 629 QRYKHPLSLILYDIDHFKRINDTYGHMIGDEVLRQLTQLVGANLRNVDLLARVGGEEFAV 688 Query: 484 ILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLA 543 +LP L +A VA RI +NE + ++++ S+G+SSS D E L A Sbjct: 689 LLPHTYLEQAHTVARRILRGVNEAVIRTEAG-PLQLTISIGMSSS-AHADNCLESLIHDA 746 Query: 544 DRRLYLAKQAGRNRVF 559 D+ LY AK GRN + Sbjct: 747 DQALYAAKNKGRNSIC 762 >UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms RepID=A8I8X7_AZOC5 Length = 510 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 103/434 (23%), Positives = 185/434 (42%), Gaps = 24/434 (5%) Query: 138 NLLSRENESLDNEITAALEVG---YLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRN 194 +LL RE + ++ + G ++R ++S + + + +S +G V++ Sbjct: 78 DLLLREAAAQIVDLPPSRGTGAPANIIRRTMDASRIPAEMILISESGKLVAS------SR 131 Query: 195 VPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGV 253 PT + +FI QR+ + + EP V +S + DS+ + GV Sbjct: 132 HPTNGEQAADRDYFI--IQRDQPATGLYLSRPFRNRL-DQEPCVALSRRLTDSHGNFAGV 188 Query: 254 LGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSK---LRFLTSSNPDHPTGNIFDPRELALL 310 L + +P++++++ + D + +R + N+F + Sbjct: 189 LAILVPLQSVREMFASLTRHRSDAISLIRLDGTILVRQPDLGSFGGFGLNVFGRPNFQRM 248 Query: 311 AQAMEHDTRGGIRMD--SRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWAL 368 + +D RY + R+ ++V V + V + + +A + Sbjct: 249 TTTPQGSFTSTSEIDRVKRYYVFSRVGDL-PLIVVVGVGMDAVTAPWQAQWLAGAATSVV 307 Query: 369 FTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQH 428 ++L + +RR + + ++ + D+LT L NR E + + + Sbjct: 308 LCLLILGAAVALRREMLRRFEIEQEFLRLSQTDSLTGLPNRRHFDEFGQREWQRAARQRS 367 Query: 429 PFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPG 487 +V+ VD+DHFK +NDR GH GDRVL + +I +SL R D AGR GGEEF +ILP Sbjct: 368 SIAVLMVDIDHFKQVNDRIGHPGGDRVLREVSDIIRASLHRPGDFAGRYGGEEFAIILPE 427 Query: 488 ASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRL 547 AA VAERIR + ++ S+G+++ ++ AD L Sbjct: 428 TDAPAAAHVAERIRAAIEANTA----EGVAPVTVSIGLAAGLAAPKGTLAEMMIAADHAL 483 Query: 548 YLAKQAGRNRVFAS 561 Y AK+ GRNRV +S Sbjct: 484 YRAKETGRNRVVSS 497 >UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXK3_DESAC Length = 475 Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 107/476 (22%), Positives = 185/476 (38%), Gaps = 30/476 (6%) Query: 95 FTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAA 154 +++ + A+ E + ++ R GV V NLL +++ N I Sbjct: 24 YSAHKVAIREAYADTTGLVRFLAMDIERM--FYGVEQMFVGLDNLLINNDKTHLNGINDV 81 Query: 155 LEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGY----VTQPWFIG 210 L LRL N+S +++ + ++ Y Y +FIG Sbjct: 82 L-----LRLKTNNSYLMDLLIVAPSGEIVNWSRSEAPPDITERDYLRYHLDHKNSAFFIG 136 Query: 211 HSQRENRHRAVRWFTSQPEHASN--TEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLR 268 + ++ RWF + + + + +D ++ + + +P + + Sbjct: 137 K-PQLSKVHNQRWFFGFSKAERDQYGRLKRILVAIIDIDHLYGRYRELDLP-----EDMI 190 Query: 269 NAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRY 328 I Y + + + P + + + R + Sbjct: 191 ITISSEDGTIYTRIPGHEQVVGQNFPGGTKLLCNLKKSKIFHGASPINGERL-------F 243 Query: 329 VSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMY 388 S ER+ ++ V + D+ S+ + + +L + R + Sbjct: 244 ASLERVGDT-SMIAAVSINEDNFFADWRRHSLLMGGFGLVVGAILFTLSILTVRSQQEQF 302 Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 +Q LQ QA D LT + NR E+A K Q P SV+ +D+DHFK +ND +G Sbjct: 303 RIQQQLQQQATTDPLTGIANRRYALEQAALEIKRNQRTGTPLSVVMMDIDHFKKVNDTYG 362 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H GD+VL A S R D+ R GGEEF ++LP +L A AE+IR + + Sbjct: 363 HHVGDQVLMEVAQTCRSHCRESDLVSRFGGEEFLILLPSTNLNGAQTHAEKIRQAIEDLS 422 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 A+ + ++AS GVS + G+ +++ S AD LY AK GRN V +NA Sbjct: 423 FPTAEG-NVSVTASFGVSQWQ--GETKIDRVVSRADAALYQAKHDGRNCVRRQNNA 475 >UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U7E6_MARAV Length = 405 Score = 267 bits (682), Expect = 9e-70, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 105/206 (50%), Gaps = 3/206 (1%) Query: 354 DFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALF 413 DF + L ++++S + M S+ LQ L A D LT LYNR A Sbjct: 184 DFMNAGWLSALAIVAGEFLVILSSFCTIWMASD--ELQDELSEIARIDPLTGLYNRRAFD 241 Query: 414 EKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVA 473 E Q PF++I DLDHFK +NDR+GH GD VL A + +R DV Sbjct: 242 ECCDIEFSRAQRSGAPFAIIMCDLDHFKRVNDRYGHHVGDEVLRRFANTLKEHIRKHDVV 301 Query: 474 GRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGD 533 R GGEEF ++LPG + EVAE++R K + ++ I + +SAS GV+ ++ D Sbjct: 302 ARFGGEEFVLLLPGKDTEQGLEVAEKLRAKTADTQITIGDDVCLTLSASFGVAHY-DSSD 360 Query: 534 YDFEQLQSLADRRLYLAKQAGRNRVF 559 ++ + AD LY AK+ GRNRV Sbjct: 361 REWSAVLHRADNALYAAKKQGRNRVV 386 >UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0B5_9AQUI Length = 463 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 75/284 (26%), Positives = 127/284 (44%), Gaps = 20/284 (7%) Query: 278 EYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHF 337 + Q+ D + ++ + + + + G + + + +H Sbjct: 199 DIQIKDIPITYINKKIRKKVLKFLGKDKPFSFIYN-----NEGNFYLITFIPVFNLNNHL 253 Query: 338 DGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQ 397 G LVR ++ S +TL + L +L S Y+ + + ++ Sbjct: 254 MGYLVR-YSKDNTYPIILKSFYTNITLSF-LLAVILGFSVYIFLKDL-------EKFRYL 304 Query: 398 AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLS 457 + D LT LYN+G E + + + ++ P S+I D+DHFK IND +GH+ GD VL Sbjct: 305 SETDRLTGLYNKGKFNEVLQREIQRAKRYKRPLSLIIFDIDHFKKINDTYGHKVGDEVLK 364 Query: 458 HAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTI 517 A LI ++R D A R GGEEF ++ P ++ A ++AE++R + + Sbjct: 365 ALAKLIKKNIRKTDFAARWGGEEFVILAPETNVEGAKKLAEKLRQAVETYKFPTVG---- 420 Query: 518 RISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 +++ SLGV+ E D E AD LY AK+ GRNRV + Sbjct: 421 KVTISLGVAQLEP--DEKPEDFIVRADMALYKAKEGGRNRVEIA 462 >UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P7Y3_AZOSE Length = 313 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 81/228 (35%), Positives = 118/228 (51%), Gaps = 6/228 (2%) Query: 337 FDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQW 396 FDG H L R D I LT + + F +S+ I R ++ L++ L+ Sbjct: 92 FDGETREFHAL----RKDGSEFPIELT-VASWFGEDRRLSFIGIIRDITERKRLEAELRQ 146 Query: 397 QAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVL 456 A D LT + NR E +HP ++I +D+D FK IND FGH GDRV+ Sbjct: 147 LATTDPLTGILNRRRFTELTTQEIHRAHRLRHPLTLIMLDIDWFKRINDAFGHTVGDRVI 206 Query: 457 SHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTT 516 A +S LR D+ GR+GGEEF V+LP + + EVAER+R K+ ++ + Sbjct: 207 QSLASACASELREIDILGRLGGEEFAVVLPELGASGSLEVAERLRQKVEGLQITLNDGRI 266 Query: 517 IRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 +R + SLGV+ ++T D + L AD LY AK+ GRN V A+ ++ Sbjct: 267 VRFTCSLGVAVLKDT-DQSPDTLLVRADNALYRAKRDGRNCVRAASDS 313 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 65/178 (36%), Positives = 91/178 (51%), Gaps = 6/178 (3%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 ++ L L Q+ D LT +YNR L K KL + H P S+I D+D FK Sbjct: 600 DITKEKELSDMLLKQSTEDPLTGIYNRRYLENKLEEYVKLAKRHDRPLSLIMFDIDFFKH 659 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 IND FGH GD+VL A ++S ++R D+ R GGEEF +I P + +A +AE++R Sbjct: 660 INDSFGHDVGDKVLKAIAKVVSENIRNTDIFARYGGEEFVIIAPETTKEDAKILAEKLRS 719 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + I ++ S GV+S E+ E L AD LY AK+ GRN+V Sbjct: 720 LIRNLHFEEG----INVTCSFGVASLEKHDTK--ETLLKRADEALYEAKKTGRNKVVV 771 >UniRef50_Q04NQ1 GGDEF family protein n=7 Tax=Leptospira RepID=Q04NQ1_LEPBJ Length = 535 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 111/440 (25%), Positives = 184/440 (41%), Gaps = 37/440 (8%) Query: 128 GVSDALVSEGNLLSRENESLDNEITAALEV-GYLLRLAHNSSSMVEQAMYVSRAGFYVST 186 G ++ + + N SL EI AAL + G L S +V A Y+S+ F Sbjct: 117 GADSGTLTAIGSVYKLNPSLLKEIEAALNLRGQFESLTEKQSEVVW-AYYLSKQKFL--- 172 Query: 187 QPTLFTRNVPTRYYGYVTQ---PWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVP 243 + + YY P++ + + N + T + + +T+S P Sbjct: 173 --YITPKFKDENYYFTDDLYLGPYWTQATPQINPT-GRQIITDLYDDLAGKGLMITISEP 229 Query: 244 VDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFD 303 V N + GV + I + MQ+ L + + GE L D + + S T + Sbjct: 230 VYVNEKFIGVASIDIGLDAMQRILESG---DCIGESMLIDENGKIIAKSG----TFKLDT 282 Query: 304 PRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALT 363 L ++ ME + S ++ + D ++ + + I L Sbjct: 283 RLPLPVITMIMEPQDLFFLEKGSFWIRNKIKDEEIWLVHEIKIFEYII-----YIIKNLL 337 Query: 364 LLWAL-FTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKL 422 W L FT +++ YV R N D LT ++NR + + + Sbjct: 338 PFWVLVFTFFIVLILYVKLRSSMNQVA------KLIHTDPLTGIWNRRGFLKLTQRSLTI 391 Query: 423 CQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFC 482 H ++++ VD+DHFK +ND+FGH GD+ L A ++S S+R D R GGEEF Sbjct: 392 GNRHGKDWTILLVDIDHFKQVNDKFGHDTGDKTLIKVAQVLSRSIRQTDAVCRWGGEEFA 451 Query: 483 VILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSL 542 + L G + ++AE +R ++ E ++ + ++ S+GVS G D E+ Sbjct: 452 IFLFGVGQKASTDIAEDLRKEV-ENQVRLDDGNP--VTLSIGVSQ----GTLDLEEAFVN 504 Query: 543 ADRRLYLAKQAGRNRVFASD 562 AD+ LY AK +GRNRV A D Sbjct: 505 ADQALYRAKSSGRNRVCAFD 524 >UniRef50_C4XKN6 Putative signaling protein n=2 Tax=Desulfovibrio magneticus RS-1 RepID=C4XKN6_DESMR Length = 629 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 1/193 (0%) Query: 371 TMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPF 430 T + + R ++ +++ L+ A D+LT L NR E + L ++ + H+ Sbjct: 426 TGISTGIFAAARDITERKIMEERLKEMATTDSLTGLNNRQHFLEHSSILFEMAKRHKANL 485 Query: 431 SVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASL 490 S+ D+DHFK +ND +GH+AGD VL + L + R+ D+ GR+GGEEF VI+P Sbjct: 486 SIALFDIDHFKQVNDTWGHEAGDLVLRELSKLALNCFRSSDIIGRIGGEEFAVIMPETDK 545 Query: 491 TEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLA 550 EA +ER R K+ E ++ + I+ S+G++ + L ++D LY A Sbjct: 546 EEAILASERFR-KIVESTRFEYENDLLSITVSIGIAQFNPNTNTTINDLTKISDDALYTA 604 Query: 551 KQAGRNRVFASDN 563 K GRN VF +++ Sbjct: 605 KANGRNMVFCAND 617 >UniRef50_D0J6R3 Diguanylate cyclase n=23 Tax=Burkholderiales RepID=D0J6R3_COMTE Length = 521 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 104/485 (21%), Positives = 186/485 (38%), Gaps = 40/485 (8%) Query: 89 LVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLD 148 + ++ + + E + R+ + + L ++G++D V + RE D Sbjct: 48 MKHAVETSRNVALLAENDVVRNLELYSLSLQ----AVIDGLNDPEVMAASPHLREVALFD 103 Query: 149 NEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWF 208 TA+ +G +L L + + + +F Sbjct: 104 KAATAS-YLGSILIL-----DTEGNI--------------AIDAQKINPGNVNLSGHDFF 143 Query: 209 IGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFL 267 H REN + + + + +S + ++ + GV+ + + + ++ L Sbjct: 144 TVH--RENSAKGLYVGDPYASPLHDGALSIPLSRRISHADGSFAGVVLIDVQLEYFRK-L 200 Query: 268 RNAIDKNLDGEYQLYDSKLRFLTSSNPD--HPTGNIFDPRELALLAQAMEHDTRGGIRMD 325 + + +G L + D NI + E +D Sbjct: 201 FSGLSLGENGSLALIRKDGAMMMRQPFDAKVIGRNIRNASTFKRFIAEPEGSFSDTSYLD 260 Query: 326 S--RYVSWERLDHFDGVLVRVHTLSE---GVRGDFGSISIALTLLWALFTTMLLISWYVI 380 R ++ L +++ S+ R I+ + +L A F + + Sbjct: 261 GTHRLYYFKNLPSLPFIIMVAKAHSDIFTAWRKRALIIACLMGVLTAAFIGLSFAFVTQL 320 Query: 381 RRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHF 440 +R + +S L A D LT L NR L E + + FS++ VD+D F Sbjct: 321 QRRIH----AESELALLARTDGLTGLNNRRRLDEMLDQEWHRARRNHSIFSLLFVDIDRF 376 Query: 441 KAINDRFGHQAGDRVLSHAAGLISSSLR-AQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 K ND +GHQAGD V++ A I ++R D+A R GGEEF V+LP SL A+ +AE Sbjct: 377 KVYNDTYGHQAGDDVIATIAQCIGDNIRRPGDIAARYGGEEFIVVLPDTSLEGASCLAES 436 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 IR +++ + + S I+ S+G ++ E D D + AD LY AK GRN+V Sbjct: 437 IRAAVSQLSVEHSGSEFGYITVSIGCAAWEPEHDADVASVIRSADEALYKAKTTGRNKVV 496 Query: 560 ASDNA 564 + Sbjct: 497 VFTKS 501 >UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7F5_MAGSM Length = 320 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 91/286 (31%), Positives = 136/286 (47%), Gaps = 26/286 (9%) Query: 293 NPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYV-----SWERLDHFDGVLVRVHTL 347 +PD+P ++ + L QA H GGI+ + + L D + L Sbjct: 45 SPDYPNDALY----VLLEGQARVHL--GGIQTEPLLILETGSCVGELSIIDQGRASAYVL 98 Query: 348 SEGVRGDFGSISIALTLLWALFTTMLLISWYVI----RRMVSNMYVL------QSSLQWQ 397 +EG +SI + +W+L + ++ ++ +RM +N V+ Q L+ Sbjct: 99 AEGATK---LLSIDESRVWSLIHSSHTLACNLLNILSKRMRNNNRVIIEGSERQRKLETF 155 Query: 398 AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLS 457 A D LT +YNR E + + + Q+P S+I +D+DHFK ND GHQ GD L Sbjct: 156 AKVDPLTGIYNRRWFDESMQRQMRRVEHSQNPLSLIMLDVDHFKRYNDTHGHQGGDEALI 215 Query: 458 HAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTI 517 A IS LR D+A R GGEEF V+LP +AER+R + E+ + ++ Sbjct: 216 ALAHTISLHLRPGDIAARYGGEEFAVVLPDTDAVSGRMIAERLRTAVEALEIKDDEGNSL 275 Query: 518 R-ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 I+ SLGV+ + T D +L + AD LY AK GRNRV D Sbjct: 276 SGITISLGVAQTSGTVD-SVSELIATADAALYQAKNQGRNRVVVGD 320 >UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ4_CARHZ Length = 668 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 65/182 (35%), Positives = 96/182 (52%), Gaps = 6/182 (3%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 ++ L+ L + D LT+ YNR E + + + PF++I +D+DHFK Sbjct: 490 DLTERKKLEEQLYRLSITDYLTQAYNRRYFTEMLEREIERAKRTKMPFALIMLDIDHFKN 549 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 +NDRFGH AGD VL A LI + +R D R GGEEF ++LP + +AA +AE +R Sbjct: 550 VNDRFGHAAGDLVLKTLANLIKNRIRQTDCLARWGGEEFVILLPNTPVEKAAGLAEELRE 609 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 +L+ E+ R++AS GV+ + L AD+ LY AK +GRN V S+ Sbjct: 610 QLSMLEIPGVG----RVTASFGVTGYCPG--DTLDTLLMRADQMLYTAKASGRNCVRFSE 663 Query: 563 NA 564 Sbjct: 664 KC 665 >UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U4U5_MARAV Length = 571 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 107/207 (51%), Gaps = 3/207 (1%) Query: 357 SISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKA 416 S + + ++ T +IS+ + +++ ++ Q L+ QA D LTRL+NR + Sbjct: 360 SHGVGIGIVLEALTLAFIISYRI--KVLEDIRSKQDELKRQASTDPLTRLFNRRYFMAEG 417 Query: 417 RPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRV 476 + + +T P SVI +D+DHFKA+ND GH GD VL A + R +D+ R Sbjct: 418 EYVLEQARTSGEPLSVIAIDIDHFKAVNDTHGHNVGDLVLVEVASVFRQFSRDRDLVARF 477 Query: 477 GGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDF 536 GGEEF ++LPGA LTE AERIR + + +R++ S+GV+ + Sbjct: 478 GGEEFVILLPGADLTEGFGCAERIRNAVEAMVIDGGDGLAVRVTVSVGVAEVNPLLE-SV 536 Query: 537 EQLQSLADRRLYLAKQAGRNRVFASDN 563 E ADR LY AK GRNRV D Sbjct: 537 EGAVKRADRSLYEAKAGGRNRVCGFDG 563 >UniRef50_Q2T680 GGDEF domain protein n=32 Tax=Burkholderia RepID=Q2T680_BURTA Length = 506 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 109/475 (22%), Positives = 196/475 (41%), Gaps = 29/475 (6%) Query: 96 TSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAAL 155 S DA ++ IE + R+ + G + A ++ L R +L ++ + Sbjct: 45 DSRDDAFEHAQRAARNTLQMIERDVTRSFALYGGTLARIA-AQLGDRRIAALPADLRREI 103 Query: 156 EVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRE 215 +++ AMYV A +V+ T +PT + + +F R+ Sbjct: 104 LFD------SAAAANEAGAMYVLDARGHVTLASTRGP--LPT--ASFASYDFFAAQ--RD 151 Query: 216 NRHRAVRWFTSQPEHASNTEPQVTVSVPVD-SNNYWYGVLGMSIPVRTMQQFLRNAIDKN 274 + + EP V +S V+ ++ + GV+ +++ V ++Q L A Sbjct: 152 SPALGTYLSGPYRMPSRGGEPCVALSRRVERADGAFAGVVVLAVRVAYLRQLLAAAS-AG 210 Query: 275 LDGEYQLYDSKLRFLTSSNPDH-------PTGNIFDPRELALLAQAMEHDTRGGIRMDSR 327 G L + R + D +++ + + + + I R Sbjct: 211 PHGVLALVHADGRIVARMPFDETLVGLDLSGTSLYSRMQFGRSGEFFDVEP---IDHMKR 267 Query: 328 YVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNM 387 + + RLD ++V+V + + + + ++ +F + ++ + + Sbjct: 268 FYLYRRLDGV-PLVVQVAIADDDIYATWRVRAWRFGVVTGVFALIFVVMSAYLAHSLWRK 326 Query: 388 YVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRF 447 +++L A D+LT L+NR AL E + + P +++ VD+DHFK ND + Sbjct: 327 STAEAALARLAGTDSLTGLHNRRALDETLEREWRRAVGGERPLAILFVDIDHFKRYNDTY 386 Query: 448 GHQAGDRVLSHAAGLI-SSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNE 506 GHQ GD VL+ + I + R DV R GGEEF V+LP A VAER+RL + Sbjct: 387 GHQVGDEVLATVSRCIAQQAARLGDVVARYGGEEFVVVLPDTPRGGALVVAERVRLGVRM 446 Query: 507 KEMLIAKSTTIRISASLGVSSSEETG--DYDFEQLQSLADRRLYLAKQAGRNRVF 559 + S ++ S+GV+ + G + AD+ LY AK AGRNRV Sbjct: 447 LGIEHEGSEVGFVTVSVGVAVWQPDGARAPHIAAIVEAADQALYQAKAAGRNRVV 501 >UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384142 Length = 445 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 90/306 (29%), Positives = 137/306 (44%), Gaps = 22/306 (7%) Query: 256 MSIPVRTMQQFLRNAID----KNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLA 311 + + +R + + ++ + ++ G + + K +T P+ G + L Sbjct: 153 IEMELRKLTSAVEHSPNLVLITDIAGRIEYVNRKFTAVTGWQPEEVIGKTTSLFKSGLTP 212 Query: 312 QAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTT 371 + D I + DG L VR T Sbjct: 213 PSTYQDLWRTILDGGEWHGEFCNRRKDGSLYWEKCSIAPVRS----------------PT 256 Query: 372 MLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFS 431 LL + ++ V+ LQ L A D+LT + NR E+A + P + Sbjct: 257 GLLTHFVALKEDVTETKRLQEELTRLASQDSLTGIANRRHFLERAHTEIIRAGRAKTPLA 316 Query: 432 VIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLT 491 V+ +D+DHFK IND +GH AGD L A S+LR D+ GR+GGEEF ++ PG L Sbjct: 317 VLMLDVDHFKKINDEYGHAAGDAALKALADTCRSTLRETDLFGRLGGEEFGILFPGDDLN 376 Query: 492 EAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAK 551 A E AER+RL + ++ I TI I+ASLG+S ++ G+ + S AD+ LY+AK Sbjct: 377 AATEAAERLRLAIAATKITIG-GATIAITASLGLSLLQD-GEKSIDAALSRADQALYVAK 434 Query: 552 QAGRNR 557 QAGRNR Sbjct: 435 QAGRNR 440 >UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4SM80_AERS4 Length = 432 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 89/378 (23%), Positives = 148/378 (39%), Gaps = 18/378 (4%) Query: 187 QPTLFTRNVPTRYYGYVTQPW-FIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVD 245 P T ++ + V+Q + R W + ++T + Sbjct: 61 FPRYITGSIEQPMHDCVSQQTGLESELPIDTLSRTSWWRFILSPIIIPEQSRITRII--- 117 Query: 246 SNNYWYGVLGMSI-PVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDP 304 V + I + ++ L+ + + YD + + S + + Sbjct: 118 -------VTAIDITAKKQLEDALKMSRKRFEAVVNSAYDGIISVSSESRIELINTAACEM 170 Query: 305 RELALLAQAMEHDTRGGIRMDSRYVSWERL---DHFDGVLVRVHTLSEGVRGDFGSISIA 361 + +T +R S + S+ R + + G+R D Sbjct: 171 FGVDESYVGKRLETLLPLRFRSNHESYFRAFSNSPINSRPMHARASVMGLRRDGSEFPQE 230 Query: 362 LTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAK 421 +T+ A I R +S L L+ A D LT + NR E + + Sbjct: 231 VTI--AKINLGQTTEMTAILRDISERARLVEELKVAATTDPLTGIANRRRFDELVKQEVQ 288 Query: 422 LCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEF 481 CQ H S++ +D+DHFK +ND GHQ GD+ + I+ LR D+ GR GGEEF Sbjct: 289 RCQRFGHTMSLLLLDIDHFKQVNDTHGHQQGDQAILSLVRRIAKQLREVDILGRWGGEEF 348 Query: 482 CVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQS 541 ++LP SL A AERIRL + + + I ++ S+G+S+S+ D + + + Sbjct: 349 IILLPETSLDLAWASAERIRLAIASESHPLGADIEIPLTVSIGISASQGPQD-NVDNMVR 407 Query: 542 LADRRLYLAKQAGRNRVF 559 AD LYLAK+ GRN Sbjct: 408 RADTALYLAKKQGRNCCI 425 >UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMG8_DESAA Length = 417 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 4/205 (1%) Query: 360 IALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPL 419 IA L A+ ++L + W ++ R+ + +++ + D LTRL+NR + Sbjct: 209 IASGLTAAISLSLLSMIWILVSRLARRLTKAYETIEVMSITDELTRLHNRRHFETRLAEE 268 Query: 420 AKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGE 479 + P S++ +D+DHFK +ND +GHQAGD VL+ A L+ ++R DV R GGE Sbjct: 269 ISRSLRYGSPMSLMILDIDHFKRVNDNYGHQAGDWVLTQFATLLKDNVRKADVPARWGGE 328 Query: 480 EFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSE----ETGDYD 535 EF VIL +++++A AE++R + E I +I ++ S+GV+S + + + Sbjct: 329 EFVVILTESTISQARMAAEKVRRNVESAEFNIPDGRSIPVTVSVGVASLDMISGDEMGSE 388 Query: 536 FEQLQSLADRRLYLAKQAGRNRVFA 560 + L AD LY AKQ GRNR A Sbjct: 389 ADVLVKTADDALYRAKQEGRNRTVA 413 >UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobacterales RepID=B7R5U6_9THEO Length = 692 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 82/301 (27%), Positives = 134/301 (44%), Gaps = 15/301 (4%) Query: 264 QQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIR 323 + + + I + + D + +T NP + E+ + + + +R Sbjct: 404 RNEILSTIMEYAGDAIIMIDDNGK-VTFWNPAAERILGYSKEEI--IGKDLHMFMIQDMR 460 Query: 324 MDSRYV-SWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVI-- 380 + Y ++++ V T+ R G + + +L + SW+ I Sbjct: 461 LYEAYREAFKKFRLTGKGSVVGKTVEMKTRHKNGH---EIDVELSLSAVRIKDSWHAIGI 517 Query: 381 RRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHF 440 R +S + L Q+ D LT +YNR + + + ++ FS+I DLDHF Sbjct: 518 IRDISERKRFEELLYRQSITDPLTNIYNRRFFMQMLEQEIERVKRNKKLFSLIMFDLDHF 577 Query: 441 KAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERI 500 K +NDRFGH AGD VL A + +R D R GGEEF ++LP SL AAE+AE + Sbjct: 578 KNVNDRFGHAAGDMVLKSVADTVKGRIRKTDYFARWGGEEFIILLPETSLNNAAELAEEL 637 Query: 501 RLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 R K++E E+ +++AS GV+ T + + D LY AK +GRN V Sbjct: 638 RKKISETEL----DGIGKVTASFGVTEYRNT--DTVDTVLLRVDGALYEAKGSGRNCVKI 691 Query: 561 S 561 + Sbjct: 692 A 692 >UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID=Q30QX5_SULDN Length = 564 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 108/204 (52%) Query: 359 SIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARP 418 SI L + L + ++ + ++ + + Q L+ A D++T+LYNR E + Sbjct: 359 SIGLIIEAMLLSYLVSYKFIIMEQEKEEEKLKQIELKLLASTDSMTKLYNRRYFTEISAK 418 Query: 419 LAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGG 478 + L + ++ S++ +D+D FK +ND +GHQ GD VL + L+ R D+ R GG Sbjct: 419 VLHLSKREKNNLSILMIDIDRFKVVNDTYGHQFGDEVLIALSRLLVEHQRKSDIVCRYGG 478 Query: 479 EEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQ 538 EEF ++LP SL +A +A++IR+ + M + + + S+GV+ + + D + Sbjct: 479 EEFVILLPNTSLKDATNIAQKIRILVESLTMEAPTNKEFKFTISIGVAQIDVEHEDDIKF 538 Query: 539 LQSLADRRLYLAKQAGRNRVFASD 562 AD LY AK +GRNRV A + Sbjct: 539 ALKRADDALYRAKNSGRNRVCAEE 562 >UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms RepID=A0L4D8_MAGSM Length = 464 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 87/263 (33%), Positives = 129/263 (49%), Gaps = 15/263 (5%) Query: 306 ELALLAQAMEHDTRGGI-RMD---SRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIA 361 E+A + M D G R+D SR + RL + + + T +E +R S++ + Sbjct: 200 EIADRMRVMRKDASGATGRLDETLSRIRTTTRLGDLESLRGALVTEAEALRSQTQSLATS 259 Query: 362 LTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAK 421 L+ A + R+ + + + ++ D LT++ NR ALF+ Sbjct: 260 LSESQAQLD--------LTRKQLQQVQDDLKKAKEESLTDPLTQVANRRALFQSLTRETA 311 Query: 422 LCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEF 481 + + P S+I +DLDHFK IND +GH GDRVL AG + LR D R GGEEF Sbjct: 312 RTRRYGEPLSLIIIDLDHFKKINDTYGHPVGDRVLKEVAGHARALLRDSDTLARYGGEEF 371 Query: 482 CVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDF--EQL 539 +LP +L +A E AE+IRL + + K ++ ISASLGV+ ++ D E Sbjct: 372 VALLPETTLPQAMEKAEQIRLSVAAMRFKL-KGESLSISASLGVAQLDDGASQDANNEAF 430 Query: 540 QSLADRRLYLAKQAGRNRVFASD 562 AD+ LY AK GRN V +D Sbjct: 431 VHRADQALYRAKSGGRNCVIQAD 453 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 102/453 (22%), Positives = 164/453 (36%), Gaps = 64/453 (14%) Query: 112 HAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMV 171 AW+ L R ++ ALV + S ++ E G + + + Sbjct: 319 PAWQEVLGWSREELLDRPWAALVHPD-----DRASTMQDMDTLRERGVITNVENRYQCRD 373 Query: 172 EQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHA 231 ++S +V Q ++ + +R ++ Sbjct: 374 GTWRWISWNSAFVPEQGLIYGVG--------------RDVTALRRMVEELRTSEARLRAM 419 Query: 232 SNTEPQVTVSVPVDSNNYWYGVLG---MSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRF 288 + T P V + W V G + ++ L E+ L D + Sbjct: 420 AATVPGVVL--------QWREVPGDRQFTYVSPRSREILGVPP------EWLLQDWRALP 465 Query: 289 LTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLS 348 + ++ ++ D E R W F+G LV Sbjct: 466 VHPADRTVWELSLRDAME--------------------RRGDW----MFEGRLVLPGGEV 501 Query: 349 EGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYN 408 RG+ + + L ++ +I + Q L+ A D LT L N Sbjct: 502 RWWRGEARPVHGGQSGAAELPEESGIVYCGIIT-DTTEHREAQERLRQLATTDGLTGLAN 560 Query: 409 RGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLR 468 R E + + + P ++I +D+D FK +ND +GH GD VL AG+ + +R Sbjct: 561 RRRFLEALEHEVQRHRRYGTPLALISIDVDRFKRVNDTWGHAVGDEVLRALAGICRAEVR 620 Query: 469 AQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSS 528 D GR+GGEEF V+LP + EA VAER+R + +L + ++ SLGVS+S Sbjct: 621 DVDTVGRIGGEEFAVLLPDTAPEEAMAVAERLRAGVEAAPLLTTAG-PLTVTLSLGVSAS 679 Query: 529 EETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 D L ADR LY AK GRNRV + Sbjct: 680 PPCDGAD--TLLREADRALYRAKAGGRNRVERA 710 >UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6Y7_GEOLS Length = 459 Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 64/181 (35%), Positives = 94/181 (51%), Gaps = 3/181 (1%) Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 R + + Q L A D+LT L NR A E+ Q + F+ + +D+D FK Sbjct: 275 RFLKELREAQEKLVEMATIDSLTGLLNRRAGLERVEEELSRHQRSERAFACLLLDIDRFK 334 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 IND +GHQAGD VLS + +R D+ R GGEEF ++LP S + A AE+IR Sbjct: 335 KINDTYGHQAGDAVLSEFGATLRRHVRKHDIVCRYGGEEFLLLLPDTSPSAARTTAEKIR 394 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 ++ A I ++ S+G+S + GD + + + AD LY AK +GRNRV + Sbjct: 395 AVTAATPIMFA-GRQIAVTTSIGISMMQ--GDETAKAMIARADAALYEAKNSGRNRVVCA 451 Query: 562 D 562 + Sbjct: 452 E 452 >UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0ZGP9_NODSP Length = 1613 Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 79/259 (30%), Positives = 119/259 (45%), Gaps = 6/259 (2%) Query: 308 ALLAQAMEHDTRGGIRMDSRYVSWERLDHF--DGVLVRVHTLSEGVRGD-FGSISIALTL 364 Q RG + + + S R H D + + +G+ G ++ Sbjct: 1355 DFHPQDCWALRRGRLHTCNHHQSGLRCQHIPADEAIATTLCIPMIAQGETLGLFYLSTNN 1414 Query: 365 LWALFTTMLLISWYVIRRMVSNMYVL--QSSLQWQAWHDTLTRLYNRGALFEKARPLAKL 422 AL L I+ V ++ + L + +LQ+Q+ D LT LYNR L E Sbjct: 1415 STALPDAKLQIARTVAEQVALAIANLNLRETLQYQSIRDPLTGLYNRRYLEEVLTQEIAR 1474 Query: 423 CQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFC 482 Q QHP SV+ +D+D+FK ND +GH GD VL ++ ++R D+A R GGEE Sbjct: 1475 GQRRQHPISVVMIDVDYFKRFNDTYGHDVGDYVLQTIGAMLKETVRGSDIACRYGGEEMT 1534 Query: 483 VILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSL 542 +ILP +SL E AE IR + + + +++ SLG++ + G L Sbjct: 1535 LILPESSLEETTIKAEEIREAIAQLTLAYNGQHLGKLTISLGIAGFPKHGTTGI-ALIQA 1593 Query: 543 ADRRLYLAKQAGRNRVFAS 561 AD LY AK AGRN+V + Sbjct: 1594 ADAALYRAKAAGRNQVVVA 1612 >UniRef50_A4VQQ9 GGDEF domain protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VQQ9_PSEU5 Length = 466 Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 93/372 (25%), Positives = 152/372 (40%), Gaps = 22/372 (5%) Query: 202 YVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVR 261 + F H R++ + + + + + + P+ N + GVL +S+P Sbjct: 100 LSDREHFRVH--RDDPQEDRLFISKPVLGRVSKQWTIQFTRPIHQNGEFAGVLVLSVPTS 157 Query: 262 TMQQFLRNAIDKNLDGEYQLY--DSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTR 319 + + ID +G L D +R + S F E E R Sbjct: 158 FFADYYQQ-IDVGPNGSIVLLGTDRSVRAIASGTQIPGRYGRFKVPE-DKPYFDPEAPQR 215 Query: 320 GGIRM------DSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTML 373 G + R ++ RL GV+V V F LT+ + + L Sbjct: 216 GFYEGVSVIDGEYRLGAYRRLID-QGVVVVVLLWPTDFMAAFQERKTLLTVSAGVISLAL 274 Query: 374 LISWYVIR-------RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTH 426 + +I + ++ + + L A D LT + +R A + H Sbjct: 275 SVVALLIFLLSSRYFQSIARLRLAHGQLAQLANTDVLTGVSSRRAFLAGLEAELARARRH 334 Query: 427 QHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILP 486 S++ +D+DHFK +ND GH GD VL + + LRA D+ GR+GGEEF ++LP Sbjct: 335 NESLSLLMLDIDHFKRVNDVHGHPIGDAVLKQFSETCAGMLRAHDLLGRLGGEEFAIVLP 394 Query: 487 GASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRR 546 A VAE+IR + + M A I ++ S+G++ E +QL + AD+ Sbjct: 395 HTDAEGARCVAEKIRTAVAQTPMPTAAGD-ITVTVSIGLAQMEGLPGE-VDQLMARADQA 452 Query: 547 LYLAKQAGRNRV 558 LY AK+ GRN+V Sbjct: 453 LYEAKRGGRNQV 464 >UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX81_9GAMM Length = 384 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 3/199 (1%) Query: 362 LTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAK 421 L LL L T + + + + +S ++ + D LT++ NR L E+ Sbjct: 186 LILLLGLSTPYIGLLVAMNSSAIRRWRQRESEVRQLSTTDPLTQVANRRHLLERLNLEIS 245 Query: 422 LCQTHQHP-FSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 C+ H S++ +DLDHFK+IND GH GD L A ++ R D+ GR GGEE Sbjct: 246 RCERSGHSELSLLMMDLDHFKSINDEHGHLFGDEALRVTARVLREQSRNTDLVGRYGGEE 305 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 540 FC++LP A ++AER R L + ++ + I+ S+G+++ + GD + E L Sbjct: 306 FCLLLPDTGPQGALQIAERCRQALEQADIDREDGEVLHITTSIGLATYQ-MGDTN-ESLL 363 Query: 541 SLADRRLYLAKQAGRNRVF 559 AD LY AK+ GRNR+ Sbjct: 364 HRADEALYQAKEQGRNRIV 382 >UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0YVN1_9CYAN Length = 1252 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 83/324 (25%), Positives = 139/324 (42%), Gaps = 10/324 (3%) Query: 245 DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQL--YDSKLRFLTSSNPDHPTGNIF 302 + N++ + + + L+ G + L + + + + D F Sbjct: 932 EMNSFVQASSSLQEAHQMLADLLKPLFPDCGGGVFMLGESEHYVEAVATWGEDFVIPTFF 991 Query: 303 DPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRG-DFGSISIA 361 E L + H I S + + + D + + +G G + IA Sbjct: 992 RLDECWALRRGCVHW----IEAKSPNLFCQHISQGDFLPAESLCVPMMAQGNTLGLLYIA 1047 Query: 362 LTLLWALFTTMLLISWYVIRRMVSNMY--VLQSSLQWQAWHDTLTRLYNRGALFEKARPL 419 L ++ V+ + + LQ + Q+ D LT L+NR L E Sbjct: 1048 TLTPGQLTPAKRQLARTVVEHLAIALANVKLQEKFKAQSMRDALTGLFNRRYLEESLEQE 1107 Query: 420 AKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGE 479 + + + ++ +D+DHFK ND+FGH AGD VL A L+ S+R+ D+A R GGE Sbjct: 1108 IHRARRNHYSVGIVMIDIDHFKRFNDQFGHDAGDEVLKTVARLLQGSIRSSDIACRYGGE 1167 Query: 480 EFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQL 539 E +ILP ASL++ +E+IR + ++ + I+AS GV+ E G+ E + Sbjct: 1168 ELTLILPEASLSDTQARSEQIRYMIEHLQLHYENQSLGSITASFGVACFPEHGE-TLEAV 1226 Query: 540 QSLADRRLYLAKQAGRNRVFASDN 563 +AD LY AK GRNRV + + Sbjct: 1227 LRIADTALYQAKALGRNRVVCATD 1250 >UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Arthrospira RepID=B5W0E3_SPIMA Length = 1380 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 110/520 (21%), Positives = 193/520 (37%), Gaps = 30/520 (5%) Query: 53 ISSQRNHLENVANALDKH-LQYNVDKLIFLRNGMR-EALVAPLDFTSLRDAVTEFEQHRD 110 I S + L+N N + L ++ +L+ ++ ++ + S + F R+ Sbjct: 877 IVSTTHQLDNQGNFVGAISLLTDISQLVSIQEALKTSEMQLSGILNSSEYGIMAFRSVRN 936 Query: 111 EH----AWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHN 166 E ++ L V G S + LL E + + + + + Sbjct: 937 EQGKIIDFEWLLVNPSAGKVVGKSADELIGKRLLEE-----LPEYQESGLFEHYVEVVES 991 Query: 167 SSSMVEQAMYVS-RAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFT 225 S+ ++ Y F+ + N R Sbjct: 992 EKSVKKEFYYNQYGIDFWFENISVKLGDGFAVTFRDITGIKQSEKALSLANEQLNNR--- 1048 Query: 226 SQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQL--YD 283 E + +S + +++ L + + L + G + + Sbjct: 1049 -INELDQRHAEMLLLS---EISDFMQAALTVQEACEAISYLLEPLFPECAGGIFLMAASR 1104 Query: 284 SKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVR 343 L ++S + + ++F P++ L + H ++ + Sbjct: 1105 DSLEMISSWGKECTSVSVFVPKDCWALRRGRVHLCNH--EKGGISCRHIQVSSTLSCTLC 1162 Query: 344 VHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYV---IRRMVSNMYVLQSSLQWQAWH 400 V +++G G ++ AL ++ V I ++N+ L+++L+ Q+ Sbjct: 1163 VPMMAQG--ETLGLFYLSTDSATALSEGKQQLAHTVAEQIGMAIANL-NLRATLEHQSIR 1219 Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D LT L+NR L E Q +HP VI +D+D+FK ND FGH AGD VL Sbjct: 1220 DPLTGLFNRRYLEEYLSQEIARAQRQKHPIGVIMMDIDNFKHFNDTFGHDAGDYVLQKVG 1279 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRIS 520 L+ +R DVA R GGEE +ILPG+SL + AE+IR + + I+ Sbjct: 1280 ELLKQKVREYDVACRYGGEEMTLILPGSSLENTSMRAEQIREAIASLVVASGGQHLGSIT 1339 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 AS GV++ + G + L AD LY AK GRNRV Sbjct: 1340 ASFGVAAFPKHGSIGID-LIQAADAALYRAKADGRNRVVI 1378 >UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SA57_CHRVI Length = 434 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 66/193 (34%), Positives = 101/193 (52%), Gaps = 1/193 (0%) Query: 370 TTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHP 429 ++ I R +++ L+ L+ D LT+L+NR F A + + HP Sbjct: 233 AAGQVVGAMEIIRDITDSKRLEEDLRQLTRLDPLTQLFNRRYFFTLAEQEYQRFLRYHHP 292 Query: 430 FSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGAS 489 ++ +D+DHFK++NDR+GH GD VL A + +LR D+ R GGEEF ++LP Sbjct: 293 MALCMIDIDHFKSVNDRYGHLVGDTVLCIVAQTLHDNLRQVDILARYGGEEFVILLPETD 352 Query: 490 LTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYL 549 L A ER+R+ + E+ + + ++ SLGV + + E+L AD+ LY Sbjct: 353 LQTACASTERLRVAVAERRIETPSG-PVSVTLSLGVVAIADGPAMTLERLLDAADQMLYR 411 Query: 550 AKQAGRNRVFASD 562 AKQAGRNRV D Sbjct: 412 AKQAGRNRVEIWD 424 >UniRef50_C0QLY1 Two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLY1_DESAH Length = 440 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 5/208 (2%) Query: 352 RGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGA 411 +G F IS + +L + + I ++ ++ L+ A D LT NR + Sbjct: 236 KGQFFFISFSR----SLDISGKFSNAIAIIEDITKRKTMEKELEKLATTDPLTGAKNRRS 291 Query: 412 LFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQD 471 K + + + +++ +D+DHFK IND FGH+ GD++L+ S LR D Sbjct: 292 FLNLFEKEMKRSKRYNYTLALVMIDIDHFKKINDNFGHETGDKILNLLVAKCHSVLRDSD 351 Query: 472 VAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEET 531 + R GGEEF ++LP L +A+ AER+R L + E+ T I + S+G + Sbjct: 352 IFARWGGEEFIILLPETDLLQASSAAERLRGALAQSELRTNDGTNINFTVSIGFTIF-GN 410 Query: 532 GDYDFEQLQSLADRRLYLAKQAGRNRVF 559 + +++ AD+ LYLAK+ GRNR Sbjct: 411 KNILIDEIIKKADKALYLAKKQGRNRAV 438 >UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TWT4_MARAV Length = 407 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 73/251 (29%), Positives = 122/251 (48%), Gaps = 18/251 (7%) Query: 311 AQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFT 370 A + + +R D + + DG + V GV D G++ + +L Sbjct: 164 AGQVAQEVEAAVRKDESFSVEYAITRKDGRKIWVWERGCGVLDDDGTMVLEGIIL----- 218 Query: 371 TMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPF 430 +S+ L++ L+ A D+LT + NR + + + P Sbjct: 219 ------------DISDRKQLENELEALATRDSLTGVLNRRECSRVLIEELERARRYNRPL 266 Query: 431 SVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASL 490 +++ +D DHFK IND +GH AGD VL + L+ S+R+ D GR GGEEF +ILP + Sbjct: 267 ALLWIDFDHFKEINDTWGHAAGDSVLCSISSLLEDSVRSVDTLGRFGGEEFVLILPEMDV 326 Query: 491 TEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLA 550 EA E AER+R ++ + + + IR++ S+GV+ + GD + L + AD+ +Y A Sbjct: 327 AEAEETAERLRQRVCNQPVALESGHNIRLTISIGVAVFPDHGD-TLDALCAAADKAMYRA 385 Query: 551 KQAGRNRVFAS 561 K+ GRN + + Sbjct: 386 KKQGRNCIAMA 396 >UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47C76_DECAR Length = 548 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 67/183 (36%), Positives = 103/183 (56%), Gaps = 1/183 (0%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 I ++ + Q L+ + D LT L+NR F A+ ++ SV+ +D+DH Sbjct: 362 ISTDITPIKHYQKELERLSQFDELTNLFNRRHFFSLAKHELNRSSRYRSKLSVMMLDIDH 421 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK IND GH+ GD VL++ I SLR D+AGR+GGEEF ++LP L +A+ +AER Sbjct: 422 FKRINDGHGHKTGDLVLANIGKQIGDSLRDSDIAGRMGGEEFAILLPETDLEQASIMAER 481 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 +R ++ E + I T+ + S+G+++ + D E L AD LY AK +GRN+V Sbjct: 482 LRKQVAETWLDIGDGRTLNCTLSIGLAT-KSDQQIDLENLLHQADTALYAAKNSGRNKVS 540 Query: 560 ASD 562 +D Sbjct: 541 CAD 543 >UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8W1_MAGSM Length = 564 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 82/314 (26%), Positives = 132/314 (42%), Gaps = 35/314 (11%) Query: 255 GMSIPVRTMQQFLRNAID----KNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALL 310 G+ +Q +R+A + N DG+ L + + D G F + + Sbjct: 277 GLESEQNKLQTIIRSAKEGMIVTNPDGDVVLVNPSAERILGKTDDEIRGEGF-FQLIDDP 335 Query: 311 AQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFT 370 GG M V +R+ + ++ D G + L+ Sbjct: 336 DYIRTFLETGGFEMPETVVYKQRVLNL---------YVRSIKDDHGEPIGSAALIL---- 382 Query: 371 TMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPF 430 V++ L+ L+ + D LT+L NR + E K + Sbjct: 383 ------------DVTDEKRLEQQLRELSTTDGLTKLINRRRMDELLDEELKRAVRYGLNL 430 Query: 431 SVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASL 490 S++ +D+DHFK ND +GH+ GD VL A + S R D R GGEEF VILP Sbjct: 431 SILLLDVDHFKKFNDTYGHEQGDHVLIALAAEMKSYFRNIDYPCRYGGEEFFVILPNTDA 490 Query: 491 TEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLA 550 A +VA+R+R ++ EKE+ +R++ S+GV+S + + + AD LY+A Sbjct: 491 DGAIKVADRLRERVAEKEV-----DGLRVTISIGVASYPDLSITRPDAMVRAADSALYVA 545 Query: 551 KQAGRNRVFASDNA 564 K+ GRN+V + A Sbjct: 546 KEQGRNKVVYASEA 559 >UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X5B9_DESRD Length = 578 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 1/199 (0%) Query: 363 TLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKL 422 T L ++ + S + ++ + L++ A D LT LYNR E + Sbjct: 381 TTLTPVYEEERITSIVGSAQDITERKRAEEHLRYLATTDELTGLYNRRHFMEILDTEIER 440 Query: 423 CQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFC 482 + ++ ++I +D+DHFK IND GH GD L H A + + R D GR+GGEEF Sbjct: 441 AKRYEQSLALISLDIDHFKTINDTHGHAVGDAALEHLAAQLLACKRQPDSLGRLGGEEFA 500 Query: 483 VILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSL 542 +I P A E+AERIR +L + + +ST++ + SLGV++ + + L Sbjct: 501 LIAPHTDRAGATELAERIRSELERTPIEL-ESTSLHPTISLGVTALNIQDNDTIDALLKR 559 Query: 543 ADRRLYLAKQAGRNRVFAS 561 AD LY AK+ GRNR S Sbjct: 560 ADDALYEAKRTGRNRTVTS 578 >UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XPG9_DESMR Length = 368 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 112/212 (52%), Gaps = 4/212 (1%) Query: 351 VRGDFGSISIALTLLWALFTTMLLIS---WYVIRRMVSNMYVLQSSLQWQAWHDTLTRLY 407 VR ++ +W L L+ + + +S L+ L A D LT L Sbjct: 146 VRRMEARLATPRGPVWCLVGAALVEPDGHVVGMTQDISARKALEEELLRLAASDPLTGLA 205 Query: 408 NRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL 467 NR FE A + + + P S+I +D+DHFKA+ND +GH AGD VL AG + SL Sbjct: 206 NRRGFFEGAARMLGMARRCGTPLSMIMLDIDHFKAVNDAYGHDAGDAVLRAVAGRLRESL 265 Query: 468 RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSS 527 R D+AGRVGGEEF V+ PG L E+AER+RL L + ++ A ++++AS GV+ Sbjct: 266 RVSDLAGRVGGEEFAVLCPGTDLAGGVELAERLRLALEDM-VVTADCRAVKVTASFGVAQ 324 Query: 528 SEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 + D + ADR LY AK+ GRNRV Sbjct: 325 CRDDRDAAPSACLTRADRALYAAKRGGRNRVC 356 >UniRef50_Q1JWQ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWQ3_DESAC Length = 648 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 67/186 (36%), Positives = 100/186 (53%), Gaps = 2/186 (1%) Query: 374 LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 L+ ++ M +LQ L+ A D LT NR LF +L + ++ SVI Sbjct: 463 LVGMVGTVLDITTMVLLQQKLERLATTDELTGAVNRRQLFIYTDQFCQLAKRYKKALSVI 522 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEA 493 DLDHFKA+ND +GH AGD VL I S LR D+ R GGEEFC+++P A Sbjct: 523 FYDLDHFKAVNDTYGHAAGDEVLRQITTRIQSMLRDTDILARYGGEEFCILVPETDGDHA 582 Query: 494 AEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 AERIR +++E + ++ +++++ S+GV++ +E L AD+ +Y AK+ Sbjct: 583 YLFAERIRQRISESSVNLSSGESLQVTVSMGVATYQEDEQGS--SLIDRADQGVYEAKRR 640 Query: 554 GRNRVF 559 GRN V Sbjct: 641 GRNCVV 646 >UniRef50_Q489Q4 Sensory box/GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q489Q4_COLP3 Length = 451 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 69/177 (38%), Positives = 99/177 (55%), Gaps = 1/177 (0%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 V+ ++ L+ + A D LT LYNR E+A + + + ++I +D+DHFK+ Sbjct: 274 DVTELFKLKEEFKLLANTDPLTNLYNRRFFIEQAEKEYQRAKRYSLSMTLISIDIDHFKS 333 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 IND+FGH AGD+VL A + +SLR D+ R+GGEEF ++LP S A AERI+ Sbjct: 334 INDQFGHPAGDQVLIEIAKQLKASLRQTDILARIGGEEFSILLPETSAMSAMTFAERIKE 393 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 + + + I +S S+GVSS D F+ L S AD+ LY AK GRN V Sbjct: 394 EQSRLIITGDWQGEINLSVSIGVSSL-IASDKAFDVLFSRADKALYQAKNTGRNTVC 449 >UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VTQ5_9CYAN Length = 1341 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 88/340 (25%), Positives = 149/340 (43%), Gaps = 18/340 (5%) Query: 229 EHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQL--YDSKL 286 E S V + D +++ L + + + + + G + + ++ + Sbjct: 1011 ELGSRNREMVLLG---DLSDFLQACLTVDEAYQAIATLVAPLFPGSSGGVFVINPSENWV 1067 Query: 287 RFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHF--DGVLVRV 344 + + + +F P+ L + H + ++ S R H D + Sbjct: 1068 EAMATWGTALASQTLFSPKSCWALRRGRPH-------LVTQPQSGLRCPHIHSDSSPLES 1120 Query: 345 HTLSEGVRGD-FGSISIALTLLWALFTTMLLISWYVIRRMVSNMY--VLQSSLQWQAWHD 401 + +G G + I+ L L ++ V + ++ L+ +L Q+ D Sbjct: 1121 FCVPMMAQGKALGILYISSPQLGQLTEAKQRLALTVAEHLALSLANLKLRETLSQQSIRD 1180 Query: 402 TLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAG 461 LT L+NR + E Q HQ P +I +D+DHFK ND FGH+AGD VL Sbjct: 1181 ALTGLFNRRYMEESLEREIHRAQRHQRPMGIIMLDIDHFKHFNDTFGHEAGDAVLRELGI 1240 Query: 462 LISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISA 521 + S+RA D+A R GGEE +ILP ASL + + AE+IR + ++ I+ Sbjct: 1241 FLQRSIRASDIACRYGGEELMLILPDASLADTKQRAEQIRHDVKGLQIEYHHKLLDAIAI 1300 Query: 522 SLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 S+GV++ E G ++L + ADR LY AK GR+RV + Sbjct: 1301 SVGVAAFAEHG-STAQELIAAADRALYQAKAQGRDRVVTA 1339 >UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGI8_CYAP7 Length = 1079 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 91/321 (28%), Positives = 149/321 (46%), Gaps = 11/321 (3%) Query: 246 SNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSK--LRFLTSSNPDHPTGNIFD 303 N++ L + + + + L+ G Y L SK + + + + N+F Sbjct: 759 VNDFLQACLNIKEAYQVIGELLQPLFPGCSGGLYMLNSSKTVVEEVATWGEHLSSKNLFT 818 Query: 304 PRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGD-FGSISIAL 362 E L + H + S+ + H LV + +G G ++ Sbjct: 819 FDECWALRRGYIHWVK-----PSQRSLFCTHTHVTPDLVETLCVPMMAQGQAVGLFYLSA 873 Query: 363 TLLWALFTTMLLISWYVIRRMVSNMYVLQ--SSLQWQAWHDTLTRLYNRGALFEKARPLA 420 + L ++ V + + LQ SL+ Q+ D+LT LYNR + E + Sbjct: 874 SEPDKLSEVKQQLARAVSEHISLALVNLQLRESLKAQSIKDSLTDLYNRRYMEESLKREI 933 Query: 421 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 L Q QH +I +D+DHFK ND FGH+AGD VL + + ++R+ D+A R GGEE Sbjct: 934 SLAQRKQHSVGLIMIDVDHFKEFNDTFGHKAGDLVLQEVSNFLMINVRSGDIACRYGGEE 993 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 540 F +ILP ASLT++ + AE+IR + + + + ++ S+GV+S + G + +QL Sbjct: 994 FLLILPEASLTDSQQRAEQIRQGIKQLDFKRYDQSFRSVTVSVGVASFPDHGTNN-DQLI 1052 Query: 541 SLADRRLYLAKQAGRNRVFAS 561 AD LY AK+ GR+RV Sbjct: 1053 QAADTALYQAKKQGRDRVVVF 1073 >UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C0K6_ACAM1 Length = 449 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 73/180 (40%), Positives = 103/180 (57%), Gaps = 1/180 (0%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 M + + Q L A D LT +YNR + Q +HP S+I VD+DHFK Sbjct: 251 MANQLEQSQQDLYRLATLDGLTEVYNRREFNRWLLVEIERSQRGEHPVSLIMVDIDHFKR 310 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 +ND +GHQAGD L A L+ +R D+ R GGEEF VILP A+ ++ +AERIRL Sbjct: 311 LNDTYGHQAGDLALCEVAQLLQREVRPGDIVCRYGGEEFGVILPKATSADSWVIAERIRL 370 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + EK +++ I ++ASLGV++ + D E+L AD+ LY AK GRNRV +++ Sbjct: 371 AIAEKSVVLPSQQHIDMTASLGVATYPDHADCK-ERLVKQADQALYTAKYQGRNRVHSAE 429 >UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X007_DESRD Length = 531 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 68/183 (37%), Positives = 103/183 (56%), Gaps = 2/183 (1%) Query: 379 VIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLD 438 V+ R VS +S L A D LT LYNR FE AR + + P +++ +D+D Sbjct: 338 VLMRDVSERKEAESRLLQMAATDELTGLYNRRRFFELARGEFNRAKRYSSPMTILLLDID 397 Query: 439 HFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 +FK IND +GH AGD L +I+S LR+ DV R+GGEEF +LP +A +AE Sbjct: 398 YFKRINDEYGHDAGDTALRCIVSMIASQLRSLDVLARLGGEEFVALLPETHQFDAERIAE 457 Query: 499 RIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 RIR ++ + + + TT+ ++ S+GV+ + D +L + AD +Y AK+ GRN+V Sbjct: 458 RIRSEIESTAINLFE-TTLFVTVSIGVAGYSKEM-QDVGELINRADEAMYRAKRDGRNQV 515 Query: 559 FAS 561 + Sbjct: 516 CLA 518 >UniRef50_C6P6Y5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y5_9PROT Length = 671 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 90/391 (23%), Positives = 164/391 (41%), Gaps = 23/391 (5%) Query: 178 SRAGFYVSTQPTLFTRNVPTRYYGYVT-QPW--FIGHSQRENRHRAVRWFTSQPEHASNT 234 S G + P+ + Y+ V+ P+ F ++ R + + + A + Sbjct: 298 SSTGSPLPRSPSKHELSAREYYWKIVSFTPYATFTEAAEINEVGRDILYGVAYLLLAFGS 357 Query: 235 EPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNP 294 +++ S + + M +++ D L + + +T +NP Sbjct: 358 -----LAIAFFSLSRKQARVRMEEEEARLREIAVTMSDGLLVADLE------GKITFANP 406 Query: 295 DHPTGNIFDPRELALLAQAME---HDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGV 351 + + E LL + M H G + + S R+ V + Sbjct: 407 E--ACRLLGYSENELLGKDMHGTLHVHGDGKQKEKHECSMLRVARTGETYRAVEEIFRCK 464 Query: 352 RGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGA 411 G IS++++ A+ V ++ + L+ +A D LT L NR Sbjct: 465 NGQLLPISVSVS---AIIREQQAAGIVVAFHDITERKKFEQELERRAQIDALTSLNNRRH 521 Query: 412 LFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQD 471 +E A + + P +++ +D+DHFK IND +GH GD VL + ++R D Sbjct: 522 FYELAEQEILRTKRYGKPLALMMLDVDHFKDINDTYGHHVGDTVLQTLGAVCLQTMREID 581 Query: 472 VAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEET 531 + GR+GGEEF ++LP A+ +A + AER+RL + M + + T+ + S+GV+ Sbjct: 582 IIGRLGGEEFAILLPEATAAQAFDAAERLRLAVAAIAMPLEQGQTLSFTISIGVTGLVAK 641 Query: 532 GDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 D D + AD +Y AK++GRNRV + + Sbjct: 642 -DSDIADMLKRADEAMYQAKRSGRNRVCSQE 671 >UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YI13_9CYAN Length = 1006 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 67/174 (38%), Positives = 94/174 (54%), Gaps = 1/174 (0%) Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 L+ LQ ++ D LT L+NR L E + H VI +D+DHFK ND FG Sbjct: 832 QLREELQNRSIRDPLTGLFNRRYLEESLEREINRACRNDHNVGVIMIDIDHFKRFNDTFG 891 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H GD VL L+ SSLRA D+A R GGEE +ILP AS+ + AE++R + + Sbjct: 892 HDGGDAVLKEVGKLLKSSLRASDIACRYGGEEMTLILPEASIENTYKRAEQVRKLIKQIN 951 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + + + I+ASLGV+ E G + + AD LY AK+ GR+RV ++ Sbjct: 952 IEHKRQSLGTITASLGVACFPEHG-MTGDAVVQRADTALYQAKKEGRDRVVGAE 1004 >UniRef50_A3Y6S3 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y6S3_9GAMM Length = 299 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 79/299 (26%), Positives = 133/299 (44%), Gaps = 8/299 (2%) Query: 264 QQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIR 323 + + A D + + L D + N + E+ + + G Sbjct: 9 KDIVEAAKDVVIVTKADLIDEPGPEIIYVNQAFTELTGYSKEEV--IGKTPRILQSKGTS 66 Query: 324 MDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRM 383 +++ + + L+ V V + S+ + L++ + I+R Sbjct: 67 EETKKLIRKGLEDKVPVRVTIKNYSK----TGKEYWLDLSITPLFNDQGEVTHIVSIQRD 122 Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 V+ Q+ L+ + D LT L NR E A Q +S++ +D+D+FK I Sbjct: 123 VTEYIYTQNKLEELSRTDPLTGLINRRVFDEMAEKEFYRYQNQNIHYSLLALDIDYFKRI 182 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND++GH GD VL+ + L ++R+QD R+GGEEFC+ILP A EVAE++R Sbjct: 183 NDKYGHLTGDYVLASFSTLCEKNIRSQDKIARIGGEEFCIILPATDKVGAIEVAEKLRRA 242 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 ++ I ++ S+GVS + DYD+ + AD LY AK GRN+V++ D Sbjct: 243 ISNARFKQ-DEHEIAVTVSIGVSQVK-MSDYDYVAMLKRADENLYRAKHQGRNQVYSQD 299 >UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IZF7_RHOP2 Length = 753 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 88/342 (25%), Positives = 136/342 (39%), Gaps = 22/342 (6%) Query: 232 SNTEPQVTVSVPV-DSNNYWYGVLGMSIPV----RTMQQFLRNAIDKNLDGEYQLYDSKL 286 + S+P+ D GV+ + + + ++ F + + L Sbjct: 385 FSGRQSYVSSLPLHDPAGSIIGVVALEVLLEKLDARLRGFEQAFFLLDARDVVVLTSRPA 444 Query: 287 RFLTSS--NPDHPTGNIFDPRELALLAQAMEHDTRGG--IRMDSRYVSWERLDHFDGVLV 342 + + PD P ++ + H GG R R R Sbjct: 445 QLSRTLWPRPDMVPAAPEQPSSTP-HSEPLRHAVTGGEWTRFGGRRSYVLRSVVEGTPWS 503 Query: 343 RVHTL------SEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQW 396 V TL + + G ++ +ALT L+ F + V + + S + ++L Sbjct: 504 VVLTLPVAGITASRLLGIIITLQLALTALFYFFGRERGVRDRVQQLLRSELQERAAALAR 563 Query: 397 QAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVL 456 QA D LT L+NR E + P S++ D+DHFK +NDR+GH GD+VL Sbjct: 564 QATTDPLTGLHNRLRFNEGLAQELARVRRTGQPLSLVMFDVDHFKEVNDRYGHPTGDQVL 623 Query: 457 SHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTT 516 + ++ LR D+ R GGEEF ++L A L A EVAE +R + Sbjct: 624 IRLSQTAAAQLRQTDLLARWGGEEFAILLVDADLHAAVEVAENLRRLVARTPF----DQI 679 Query: 517 IRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 ++AS GV+ D + L AD LY AK GRNRV Sbjct: 680 GSVTASFGVAECRP--DESADSLLERADAALYRAKSNGRNRV 719 >UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B886_9CHRO Length = 1121 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 88/321 (27%), Positives = 142/321 (44%), Gaps = 11/321 (3%) Query: 246 SNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSK--LRFLTSSNPDHPTGNIFD 303 N++ L + + + L+ G Y L DSK L + + + + ++F Sbjct: 803 VNDFLQACLNIEEAYEVIGELLQPLFPGCSGGLYMLNDSKTLLEAVVTWGENISSKSLFT 862 Query: 304 PRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGD-FGSISIAL 362 E L + H + + H V + +G G ++ Sbjct: 863 FDECWALRRGYIHLVK---PNQPSLLCLH--THRTPAPVESLCVPMMAQGKAVGLFYLST 917 Query: 363 TLLWALFTTMLLISWYVIRRMVSNMYVLQ--SSLQWQAWHDTLTRLYNRGALFEKARPLA 420 + + ++ V + + LQ SL+ Q+ D+LT LYNR + E + Sbjct: 918 SEPEKISEVKQQLARAVSEHISLALVNLQLRESLESQSIKDSLTGLYNRRYMEESLKREI 977 Query: 421 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 L Q QHP +I +D+DHFK ND FGH+AGD +L + +++R+ D+A R GGEE Sbjct: 978 NLAQRKQHPVGLIMIDVDHFKQFNDNFGHKAGDLILHEVGNFLMANVRSGDIACRYGGEE 1037 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 540 F +ILP ASL+++ + AE+IR + + S ++ S+GV+ G E L Sbjct: 1038 FLLILPEASLSDSQQRAEQIRKGIKQLNFQQYNSAFTSLTVSIGVACFPAHGKQG-ETLI 1096 Query: 541 SLADRRLYLAKQAGRNRVFAS 561 AD LY AK GR+RV Sbjct: 1097 QSADMALYQAKNQGRDRVVVF 1117 >UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor domain and GGDEF domain n=2 Tax=Idiomarina RepID=A3WKY5_9GAMM Length = 999 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 72/203 (35%), Positives = 114/203 (56%), Gaps = 10/203 (4%) Query: 362 LTLLWALFTTMLLISWYVIRRMVSNMYVLQ-------SSLQWQAWHDTLTRLYNRGALFE 414 L++++AL ++ IR + + L+ L+ A D+LT+L NR A E Sbjct: 796 LSIIFALGLAATILVRARIRFLNNQRAQLELMVAEKTKELKGLARQDSLTQLGNRRAFDE 855 Query: 415 KARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAG 474 + + K C+ + P S+ +D+DHFK+INDRF H GD+VL + L+S+ LR D Sbjct: 856 QLQYEFKRCERSEQPLSLAIIDVDHFKSINDRFLHVIGDQVLIELSALLSNMLRDIDYIA 915 Query: 475 RVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDY 534 R GGEEF +++P + EA + AERIR ++ + + + ++ S+GV+SSE ++ Sbjct: 916 RWGGEEFALLMPETTAKEALQAAERIRQRIEDTSYQHL-ADELAVTVSIGVASSEHYPNH 974 Query: 535 DFEQLQSLADRRLYLAKQAGRNR 557 L AD+ LY AKQ+GRNR Sbjct: 975 S--ALLVAADKALYKAKQSGRNR 995 >UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VYV6_MAGSA Length = 578 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 2/179 (1%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 + ++ +++ L+ A D LT ++NR E AR + H P + +D+DH Sbjct: 399 VMLDITERKRMEAELRRLATTDVLTGIFNRRHFMEMARIEVDRARRHGRPLVALMLDIDH 458 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK IND GH GD + A + + +R +DV GR+GGEEF ++L L A VAER Sbjct: 459 FKRINDTHGHPVGDVAIKALADVCTQIIRHEDVLGRMGGEEFAIVLTETDLDGALLVAER 518 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +R + + T+ + S+GV+ GD + + S AD LY AK++GRN+V Sbjct: 519 LRQAVAAIRIPAELG-TVAFTTSIGVAE-RLEGDATIDTILSRADMALYSAKRSGRNKV 575 >UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfuromonadales RepID=A1AK55_PELPD Length = 301 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 64/184 (34%), Positives = 94/184 (51%), Gaps = 3/184 (1%) Query: 374 LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 + S ++I + V+ + + L D LT +YNR L + + + PFS++ Sbjct: 117 ITSLFLIVQDVTELATYEQKLIEMNTVDALTGVYNRRFLESRLKEECDRYGRYSRPFSLM 176 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEA 493 +D+D FK +ND GHQ GD VL + A ++ +R D R GGEEFC +LP A Sbjct: 177 MIDIDFFKKVNDTHGHQGGDLVLKNVAAGAAAMIRKSDFLARYGGEEFCCLLPETDCDAA 236 Query: 494 AEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 VAE +R + E L + IR++ SLG++ D E L AD LY AK++ Sbjct: 237 ETVAEHLRAHIENMEHLF-QKKVIRVTISLGIACFAP--DDSPETLVKRADEALYQAKRS 293 Query: 554 GRNR 557 GRNR Sbjct: 294 GRNR 297 >UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM57_9PROT Length = 461 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 88/287 (30%), Positives = 132/287 (45%), Gaps = 17/287 (5%) Query: 276 DGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLD 335 +G YQ+ + + L + D G + ++EH R D ++E Sbjct: 190 NGRYQMVNQRYAELHGRSRDDVVGRTPAEFLAPAILASIEHWDRALYDGDEPRQAYEDDM 249 Query: 336 HFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQ 395 F GV R L + D + I +T + V+ + L+ L+ Sbjct: 250 SFAGVGARRMVLHKAKMWDASNRLIGVTGVMV---------------DVTESHRLRQELE 294 Query: 396 WQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRV 455 A D LT L NR A +AR + H P SV+ +D+DHFK++NDR+GH GD V Sbjct: 295 RLATTDPLTGLSNRRAFLMRAREEVERAVRHDRPMSVVMIDVDHFKSVNDRYGHDIGDLV 354 Query: 456 LSHAAGLISSSLRAQ-DVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKS 514 L A + +LR DVA R GGEEF ++LP +++ A ++AERIR+ + + Sbjct: 355 LQDVAATVQGALRNSGDVAARFGGEEFVLLLPETTVSGAQQLAERIRVAFERTAVETEQG 414 Query: 515 TTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 +R +AS GV D + + AD LY AK+AGRNRV + Sbjct: 415 A-VRFTASFGVDVFRSDMDTGIDTVLKRADDALYRAKEAGRNRVQLA 460 >UniRef50_Q2W1M0 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W1M0_MAGSA Length = 477 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 67/182 (36%), Positives = 98/182 (53%), Gaps = 2/182 (1%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 I ++ ++S L+ A D LT NR A F A + + + SV+ +D+DH Sbjct: 297 IVTDITERKHMESQLRHLATTDELTGCLNRRAFFVAAEQELERASRYGNAVSVLMIDIDH 356 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK +NDR GH GD+ L A I ++LR D GR+GGEEF +LP +L A VAER Sbjct: 357 FKQVNDRHGHAVGDKALKAATAAIRANLREIDSFGRLGGEEFAAMLPETTLAGALLVAER 416 Query: 500 IRLKLNEKEMLIAKS-TTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +R + + + +R++ SLGV+ + G+ +Q+ + AD LY AK GRNRV Sbjct: 417 LRQAVEAIALPLGDDQPPLRLTTSLGVAERQP-GEVAVDQVLARADTALYRAKAEGRNRV 475 Query: 559 FA 560 A Sbjct: 476 LA 477 >UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA43_HYDS0 Length = 610 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 63/178 (35%), Positives = 91/178 (51%), Gaps = 6/178 (3%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 ++ L L Q+ DTLT +YNR L +K L + ++ P SVI D+D FK Sbjct: 438 DITKEKELSELLLKQSIEDTLTGIYNRRYLKDKLERHVNLAKRYERPLSVIMFDIDFFKH 497 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 IND FGH GD+VL + ++S ++R D+ R GGEEF ++ P + +A +AE++R Sbjct: 498 INDTFGHDVGDKVLIAISKVVSENIRNTDIFARYGGEEFIIVAPETTKEDAKILAEKLRS 557 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + I ++ S GV S E+ E L D LY AK+ GRNRV Sbjct: 558 LIRNLHFEEG----INVTCSFGVVSLEKPDTK--ETLLKRVDNALYEAKRTGRNRVVV 609 >UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDS7_9PROT Length = 750 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 74/232 (31%), Positives = 115/232 (49%), Gaps = 8/232 (3%) Query: 331 WERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLW-ALFTTMLLISWYVIRRMVSNMYV 389 E + H + + ++ + + I +T W + +LL +I +S + Sbjct: 526 LEDIPHIKKEKILSNYINVNYQQGYTEKYIKVTYFWFGIVIIILLGIILIIIYQLSKIKK 585 Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L L+ A++D LT +YNR + + + ++ P S+I +D+D+FK IND FGH Sbjct: 586 LSKQLETMAFYDKLTNIYNRAKFKNILKEFIEYSKRYKTPLSLIFLDIDYFKKINDNFGH 645 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 + GD VL + SLR DV GR GGEEF ++LP + A VAE+IR + + Sbjct: 646 EKGDLVLKEMVKVAKLSLRESDVFGRWGGEEFLILLPNTDINGAKIVAEKIRDAIESHDF 705 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 I+++ SLGV+ +E D E + AD LY AK+ GRNRV Sbjct: 706 -----DGIKVTVSLGVTQLKE--DDTIESFVNRADIALYQAKKEGRNRVVVF 750 >UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BVV0_DESAD Length = 838 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 64/178 (35%), Positives = 92/178 (51%), Gaps = 1/178 (0%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 V+ ++ L+ A D +T+L NR E + + + P S++ D+D FKA Sbjct: 656 DVTESREKENQLRRMATTDDMTKLNNRRYFIELVKSEIERSIRYSRPLSLVMFDVDKFKA 715 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 +ND +GH GD VL A LR D+ GR+GGEEF V LP L A +AER+R+ Sbjct: 716 VNDTYGHDVGDMVLKAIAATAKGVLRDVDIIGRLGGEEFAVGLPETDLKGAMLLAERLRV 775 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 L E + + + + SLGV+ + + D + L AD LY AK+ GRNRV A Sbjct: 776 VLEEASVELPDGGIVDFTVSLGVAVLDRS-ITDVDVLLKHADLALYAAKENGRNRVEA 832 >UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASG6_PELPD Length = 505 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 66/181 (36%), Positives = 96/181 (53%), Gaps = 6/181 (3%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 ++ +Q L+ + D LT LYNR L++ + H HP +++ +D+DHFK Sbjct: 318 DITERTRMQEELREASERDPLTSLYNRRKLYQLLTVELTRTRRHGHPLTLMLLDIDHFKR 377 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 IND FGH +GD VL+ A LIS+ LR+ D+ R GGEEF + P + AA +AE+IR Sbjct: 378 INDTFGHDSGDLVLTQVAELISAILRSTDILARYGGEEFVIACPETDMDGAAVLAEKIRS 437 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + + ++ S+G+S E D + L AD LY AK+ GRNRV S Sbjct: 438 SIAMFSFPTVGA----VTISVGISLLESKDDIN--ALIKRADTALYAAKEMGRNRVVRST 491 Query: 563 N 563 Sbjct: 492 E 492 >UniRef50_D1TJS9 Response regulator receiver protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TJS9_9BURK Length = 577 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 111/571 (19%), Positives = 214/571 (37%), Gaps = 48/571 (8%) Query: 10 QSWLKKLARRLGPGHVV-NLCFIVVLLFSTLLTW-REVVVLEDAYISSQRNHLENVANAL 67 W + +L + ++C+ V + + + R+V A S+ +N V Sbjct: 14 PFWRIRARIQLCKRLPMRHVCYAYVFVGRVIGRYCRDVAAFSRATFSASQNQKRMVTRRP 73 Query: 68 DKHLQYNVD--------KLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELN 119 + + +V + L +AL D + + + + R+ + + L Sbjct: 74 NNVIAISVLLAGAILAIAVSLLAQMREDALRRAQDSIANISLLVQRDVSRNLEIYDLSLR 133 Query: 120 RRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSS-SMVEQAMYVS 178 ++G+ V + R+ D I+A ++G + L N + +A Sbjct: 134 ----AVIDGLRQPGVLDLPPAIRQMVLFDGSISAQ-DMGSVFVLDENGNVRFDSRAW--- 185 Query: 179 RAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQV 238 P R + + + +F QR + + ++ + ++ Sbjct: 186 -----------------PPRAHSHADRDYFK--VQRASPDVGLYISHPFSRSGTDEDLRI 226 Query: 239 TVSVPVDS-NNYWYGVLGMSIPV---RTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNP 294 +S + + + GV+ ++ + + ++ ++ L D + +P Sbjct: 227 ALSRRISRPDGSFGGVVVGTLRLTYFHRLFDGMKLGPSGSMA--LMLSDGTMLMRRPYDP 284 Query: 295 DHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDG--VLVRVHTLSEGVR 352 N+ + + D G +D R W H DG +++ V + + Sbjct: 285 KTIGINLTGTANFSRFVKQPSGDFFGTAAID-RVERWYAFRHIDGFPLILDVALSTRDIY 343 Query: 353 GDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGAL 412 + + + L ++ + R + + L+ A D LT L NR Sbjct: 344 VQWRRRAWIIGTLIVALDVTIIALAILFSRQLRLRRAAEEELRELARTDGLTGLNNRRTF 403 Query: 413 FEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQD 471 E + Q + P S++ +D+D+FK ND +GH AGD L A I+ ++ R D Sbjct: 404 EEHVNDEWRRAQRNGRPLSLLLIDVDNFKGFNDLYGHSAGDEALIGVARCIAQNVRRPGD 463 Query: 472 VAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEET 531 A R GGEEF V+LP T A +AE+IR + + ST ++ S G +++++ Sbjct: 464 TAARFGGEEFAVLLPDTDATGAQRIAEQIRAAVQALQCRHVASTHHVLTVSAGAATAQDA 523 Query: 532 GDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 L AD+ LY AK GRNRV D Sbjct: 524 AFATSRALVDAADQALYRAKDGGRNRVMVFD 554 >UniRef50_A8ZX32 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZX32_DESOH Length = 396 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 72/198 (36%), Positives = 102/198 (51%), Gaps = 2/198 (1%) Query: 365 LWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQ 424 + T L I Y+ V + + + D LTRL NR E++ Q Sbjct: 196 VQVFITVSLTIMLYITIVTFKRWGVREDVYRKMSTVDGLTRLTNRRTFIERSEKELSSGQ 255 Query: 425 TH-QHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCV 483 S I +D+DHFKAIND +GH AGD+VL A +++ R D GR GGEEF + Sbjct: 256 RRPSSHISCIMIDIDHFKAINDTYGHAAGDKVLVKIATILTEKARPTDEVGRYGGEEFAM 315 Query: 484 ILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLA 543 +LP +L A +VAER R + E+++ I+++AS GV+S + +L A Sbjct: 316 LLPATTLAGAVKVAERQRASIANAEIIV-DGNIIQVTASFGVASCPSDDIDNINELLKTA 374 Query: 544 DRRLYLAKQAGRNRVFAS 561 D LY AK+AGRNRV A+ Sbjct: 375 DVALYEAKRAGRNRVVAA 392 >UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QT79_PERMH Length = 509 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 102/207 (49%), Gaps = 17/207 (8%) Query: 352 RGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGA 411 + F + + LL L TM I + V++ + A DTLT +YN+G Sbjct: 307 KNTFIISYVGINLLVGLLLTMSFI-----------LGVIKERFKAMAEIDTLTGIYNKGK 355 Query: 412 LFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQD 471 + + + P S+I D+DHFK IND FGHQAGD VL A ++SS++R+ D Sbjct: 356 FNHLLQVELDRSKRYGRPLSLIIFDIDHFKKINDAFGHQAGDYVLKTLAKIVSSNIRSTD 415 Query: 472 VAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEET 531 R GGEEF ++ P L A +AE+IR + E ++++S GV+ + E Sbjct: 416 FFARWGGEEFVILAPETDLEGAQILAEKIRKAIEEYPFETVG----KVTSSFGVTEAFE- 470 Query: 532 GDYDFEQLQSLADRRLYLAKQAGRNRV 558 + + AD LY AK GRNRV Sbjct: 471 -NDTVDSFVKRADVALYKAKDKGRNRV 496 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats. Identities = 87/311 (27%), Positives = 123/311 (39%), Gaps = 24/311 (7%) Query: 273 KNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRY-VSW 331 +N D R T +P + + P E + R Sbjct: 328 ENSHDVIWTLDIPSRTYTYVSPAIKEMSGYLPEETVGQPLDVRLTPDSAARAARDIDQRL 387 Query: 332 ERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMY--- 388 R+ D V + E VR D I+ + + L + + I R VS Sbjct: 388 RRIAAGDKAASVVVSELEQVRKDGEVITTEVVSSYLLDADGVAQTILGITRNVSERKAVE 447 Query: 389 ------------------VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPF 430 LQ +LQ A D+LT LYNR L E + P Sbjct: 448 SALRETNRQLHARIEEIGRLQVALQELAVRDSLTGLYNRRYLDETLEREVSRARREGIPL 507 Query: 431 SVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASL 490 S++ +D+DHFK +ND +GHQ GD VL A +S+ +RA+DVA R GGEEF ++LP L Sbjct: 508 SLVMLDIDHFKQVNDTYGHQVGDEVLRILASTLSADIRAEDVACRYGGEEFLILLPNMPL 567 Query: 491 TEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLA 550 A+ R + + I + SLGV++ E G + L AD+ LY A Sbjct: 568 ETTMLRAQGWRSAVEALSVKHGN-FQITFTISLGVAAYPEHG-KTPDDLTRCADQALYRA 625 Query: 551 KQAGRNRVFAS 561 K GRN+V Sbjct: 626 KNEGRNQVSVF 636 >UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1TWP6_MARAV Length = 565 Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 63/183 (34%), Positives = 94/183 (51%), Gaps = 2/183 (1%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 +R + L+ + D LT + NR EK H+H S+I +D+DH Sbjct: 372 VRERTEELEQANEQLRAISLTDGLTHVANRRRFDEKLETEWNRALRHEHELSLILLDIDH 431 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 FK +NDRFGH GD L A ++S + R+ D+ R GGEEF ++LP + A +VAE Sbjct: 432 FKQVNDRFGHLVGDDCLVALASILSDEVQRSGDLVARYGGEEFAILLPTTDVAGAQQVAE 491 Query: 499 RIRLKLNEKEMLIAKS-TTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 R+RL + + + + + ++ SLGV++ D ++L AD LY AK GRNR Sbjct: 492 RMRLSVARTPVNSGEHMSPVSLTISLGVATLTPNRQSDCQELIRRADEALYAAKSDGRNR 551 Query: 558 VFA 560 V Sbjct: 552 VVV 554 >UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgaris RepID=B8DLV9_DESVM Length = 381 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 103/206 (50%), Gaps = 5/206 (2%) Query: 359 SIALTLLWALFTTMLLISWYVIRRMVSN--MYVLQSSLQWQAWHDTLTRLYNRGALFEKA 416 + + + AL + R + + +L L A D LT L NR AL E+ Sbjct: 162 AFRIRYMLALLCCGIFAGLAEYTRRHTQRLLILLTQQLAESARTDELTGLANRRALCERL 221 Query: 417 RPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRV 476 + P S+ D+DHFK++ND +GHQ GD VL AGL+ +LR QD R Sbjct: 222 EYEQVRARRTGRPLSIAICDIDHFKSVNDCYGHQCGDLVLQSVAGLLHDNLRHQDTICRW 281 Query: 477 GGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDF 536 GGEEF ++LP AA +AE++R + E + ++ S GV + GD D+ Sbjct: 282 GGEEFLLLLPETDEAGAARLAEKLRSLVEAME-YSYHGIPVSVTLSFGVHTCGPEGDIDY 340 Query: 537 EQLQSLADRRLYLAKQAGRNRVFASD 562 AD++LYLAK+ GRNRVFA + Sbjct: 341 H--IRKADQKLYLAKEQGRNRVFAGE 364 >UniRef50_Q3JJL8 GGDEF domain protein n=52 Tax=Burkholderia RepID=Q3JJL8_BURP1 Length = 528 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 96/376 (25%), Positives = 161/376 (42%), Gaps = 12/376 (3%) Query: 196 PTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVD-SNNYWYGVL 254 P + + +F+ R++ + + P + +S + ++ + GV+ Sbjct: 158 PPAVANFSYRDYFVYQ--RDHPKGGLYIGEPYAARLRHGAPTIALSRRITRADGSFGGVV 215 Query: 255 GMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAM 314 ++ + + L + + DG ++++ +T D P + AL A Sbjct: 216 VGTLGIDYFRSLL-DGLSVGPDGTAAVFETNGLMITRLPFD-PKMVGRSIADSALYAHVR 273 Query: 315 EHDTR-----GGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALF 369 EHD I R ++RL ++V V V + + L +L +F Sbjct: 274 EHDAGVFTGVASIDGVRRLYVYKRLQGL-PIVVNVSPAERHVFMQWRIRAQRLGVLMLVF 332 Query: 370 TTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHP 429 ++ ++ R + + LQ A D LT L NR A E R P Sbjct: 333 GIAIVGGTALLARELRWRRHAEMRLQRLARTDALTGLGNRRAFDENLRSEWARALRTGRP 392 Query: 430 FSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGA 488 S++ VD+D FK ND +GHQAGD VL G ++ ++ RA D R GGEEF + LP Sbjct: 393 LSLLFVDIDQFKDYNDHYGHQAGDDVLREVGGCLAVNVRRAADDVARYGGEEFVITLPDT 452 Query: 489 SLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLY 548 AA +AE IR + + ++ +S R++ S+G+ +S E + L +AD LY Sbjct: 453 DAKSAAAIAEYIRRAVYDLDIEHVRSPYARVTVSIGLVTSHEHIAHSDATLVKMADAALY 512 Query: 549 LAKQAGRNRVFASDNA 564 AK GRNRV + +A Sbjct: 513 QAKSTGRNRVCGAQHA 528 >UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73713_SYNY3 Length = 970 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 64/184 (34%), Positives = 94/184 (51%), Gaps = 2/184 (1%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 + ++N+ L+ L+ Q+ D LT L+NR L + + + H VI D+DH Sbjct: 784 VSLAIANIK-LRERLENQSIRDPLTGLFNRRYLEQFFLQEIGRAKRYNHSIGVIMGDIDH 842 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK ND+ GH AGD VL ++ S++R D+A R GGEE ++LP SL + AE Sbjct: 843 FKQFNDQLGHDAGDHVLKTIGRILQSNIRGSDIACRYGGEEMTIVLPQTSLEDTLVKAES 902 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 +R + E+ ++ SLGV+ G+ + ADR LY AK AGRNRV Sbjct: 903 LRQAIASMEVEYKGKELGTLTVSLGVACYPNHGETMVN-IIQAADRALYQAKAAGRNRVV 961 Query: 560 ASDN 563 +D Sbjct: 962 MADE 965 >UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NS82_9VIBR Length = 385 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 77/224 (34%), Positives = 112/224 (50%), Gaps = 12/224 (5%) Query: 337 FDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQW 396 F L + G ++ TLL +F ++W + R+V+ +Y Sbjct: 172 FIWTLFEERIDDFMISGMAHQLAFVSTLLMVIFI-GFSVTWMLTGRLVATIYDT------ 224 Query: 397 QAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVL 456 + D LT+LYNR AL E H+ P SV+ +D+DHFK +ND +GHQAGDRVL Sbjct: 225 -SIKDELTQLYNRRALEELLPKEIARSSRHKQPLSVLLLDIDHFKKVNDTYGHQAGDRVL 283 Query: 457 SHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTT 516 L+ R D++ R GGEEF V+LP + +A VAE++R + ML Sbjct: 284 RTTGKLLILQTRKDDLSFRYGGEEFLVLLPNTDVEKAVIVAEKLREAIKRARMLPTNVD- 342 Query: 517 IRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 +AS GV+ G+ D++ AD+ LY AK+ GRN+V A Sbjct: 343 -SCTASFGVTQF--NGEDDWQTAIERADQALYSAKENGRNQVTA 383 >UniRef50_A4JS57 Diguanylate cyclase n=3 Tax=Burkholderia vietnamiensis G4 RepID=A4JS57_BURVG Length = 513 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 105/383 (27%), Positives = 166/383 (43%), Gaps = 14/383 (3%) Query: 190 LFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDS-NN 248 + + + P + P+F H +R + + P E + +S ++ N Sbjct: 129 VNSSSAPANRVDWSELPFFRTHQERIDSG--LYISLPYPSEFPPHEKVIALSRRINGPNG 186 Query: 249 YWYGVLGMSIPVRTMQQF--LRNAIDKNLDGEYQLYDSKLRFLT--SSNPDHPTGNIFDP 304 GV+ + ++ F L + + D + + +T N D ++ Sbjct: 187 SLAGVV---VGRLSIDYFNHLFDGLAVGRDETIFIMATNGTLITRLPYNGDVVGKSLQGS 243 Query: 305 RELALLAQAMEHDTRGGIRMDS--RYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIAL 362 L+ L + G R+D R + RL ++ V E V + + + L Sbjct: 244 AVLSGLLRRPSDAVSGISRIDGVHRLYVYRRLPGL-PFVIAVGPAWELVFAGWRTRAEWL 302 Query: 363 TLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKL 422 T ALF+ ++ ++ R + + LQ A D LT L NRGA E R Sbjct: 303 TGFMALFSVVIWAGALLLARELRRRQRAECDLQRLARRDALTGLENRGAFDETLRQEWAN 362 Query: 423 CQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEF 481 S++ +D+D FK+ ND +GHQ+GDR L A IS+ + R D R GGEEF Sbjct: 363 TLRTGRHLSLLFIDIDQFKSYNDHYGHQSGDRALKAVAHCISACVSRPSDHVARYGGEEF 422 Query: 482 CVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQS 541 VILP + AA VAE IR +++ + KS ++AS+GVSSS +D + L Sbjct: 423 VVILPETDVEGAAAVAEEIRQAIHDMHVAHVKSRFNYVTASIGVSSSAHPAVHDGDALIR 482 Query: 542 LADRRLYLAKQAGRNRVFASDNA 564 +AD +Y AK GRNRV + A Sbjct: 483 VADLAVYEAKSQGRNRVCIAAEA 505 >UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DIJ3_DESVM Length = 1000 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 65/182 (35%), Positives = 96/182 (52%), Gaps = 2/182 (1%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 I R +++ L+ +L +A D LT + NR F A + P +V+ +DLD Sbjct: 797 IARDITDRKRLEQALMREATTDPLTGIRNRRQFFVDAEREMGRAVRYGRPLAVLMLDLDR 856 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK +NDRFGH AGD VL +LR D+ GR+GGEEF +L L +A AER Sbjct: 857 FKRVNDRFGHHAGDAVLMGCVQACQQALRETDILGRLGGEEFAAVLLETDLDDALAAAER 916 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 +R + E ++ + +R + S+G++ GD + + AD LY AK+AGRNRV Sbjct: 917 LRRAVEEMDVPFS-GQRLRCTVSIGLA-LRGPGDGALDDILRRADSALYAAKEAGRNRVM 974 Query: 560 AS 561 + Sbjct: 975 LA 976 >UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D439_DEIDV Length = 633 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 69/176 (39%), Positives = 96/176 (54%), Gaps = 1/176 (0%) Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 L+ SL+ Q+ D LT LYNR L E Q P +VI +D+DHFK ND G Sbjct: 457 RLRESLRQQSIRDPLTGLYNRRYLEESFERELHRAQRSDDPIAVIMLDIDHFKHFNDSHG 516 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H+AGD +L L+S +RA+DVA R GGEEF ++ PG +L +A A+++R + + Sbjct: 517 HEAGDELLRALGQLLSGCIRAEDVACRYGGEEFAMVFPGMTLDQATRWADQLRHTVESTQ 576 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 ++S SLGV++ + G L AD LY AK+ GRNRV +D A Sbjct: 577 FASRGEALEQVSVSLGVAAFPQHG-RHLADLIRAADAALYRAKREGRNRVITADGA 631 >UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IX34_RHOP2 Length = 350 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 67/185 (36%), Positives = 98/185 (52%), Gaps = 2/185 (1%) Query: 376 SWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQV 435 +I V+++ L+ A D +T ++NR A + + P S + + Sbjct: 143 GRMLIYSDVTDIVRNAEELERLATTDGMTGIFNRRHFLTLADREWARARRYGRPLSCLMI 202 Query: 436 DLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAE 495 D+DHFK+IND FGHQ GD ++ H A L R DV R+GGEEF ++LP L +A Sbjct: 203 DIDHFKSINDDFGHQVGDDMIVHLAKLARDCKRDCDVLARIGGEEFALLLPETDLPQALA 262 Query: 496 VAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGR 555 VAER+R ++ +L+A ++R + S+G ++S T D L ADR LY AK GR Sbjct: 263 VAERLRGEVAASSLLMASG-SVRATVSIGAATSAATID-GISDLMRAADRALYEAKHGGR 320 Query: 556 NRVFA 560 NRV Sbjct: 321 NRVVC 325 >UniRef50_A0KRY2 Diguanylate cyclase n=4 Tax=Gammaproteobacteria RepID=A0KRY2_SHESA Length = 581 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 113/214 (52%), Gaps = 7/214 (3%) Query: 352 RGDFGSIS---IALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYN 408 R +F +S + + ++ L+I++ + R++ + Q L++QA D+LT L+N Sbjct: 361 RAEFSYLSSHGVGVGIMLEALVLALIIAYRI--RLLEEIKASQEELKYQAATDSLTHLFN 418 Query: 409 RGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLR 468 R ++A+ + Q P +VI D+D FK +ND++GH GD+V+ A + R Sbjct: 419 RRHFHKEAQRIYMQASVTQQPMAVIICDIDLFKRVNDKYGHLMGDQVIIDIATTLKQHAR 478 Query: 469 AQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSS 528 D+ R GGEEF ++L SLTEA + AERIR + E + ++ SLGV++ Sbjct: 479 KCDIVARYGGEEFIMLLHDVSLTEAHQCAERIRSAVAELSFMAETQEAFTVTLSLGVAAV 538 Query: 529 EETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + + E LAD LY AK GRN V +S+ Sbjct: 539 DFV--HPLEHAIKLADDALYRAKHQGRNNVQSSE 570 >UniRef50_A0Y806 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y806_9GAMM Length = 562 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 79/234 (33%), Positives = 118/234 (50%), Gaps = 8/234 (3%) Query: 332 ERLDHFDGVLVRVHT-LSEGVRGDFGSISIALTLLWALFTTMLLISWYV--IRRMVSNMY 388 + LD+ DG++ T LS VR +I LT + L L++ + ++ + Sbjct: 323 DNLDNLDGLIFESDTGLSSEVRS---AIVFILTFVIVLLAVSGLLAIFNRRLQSEIRERK 379 Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 +++ L+ A+ D LT L NR + Q + FSVI +DLD FK +ND++G Sbjct: 380 LVEEKLETLAYTDPLTNLLNRRGFSTRYADELMRAQRYGDVFSVILIDLDLFKKVNDQYG 439 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H++GDRVL A L+ R D GR GGEEF ++LP SL EA A R+ + + Sbjct: 440 HESGDRVLVSVADLLLKDTRETDFCGRFGGEEFILLLPNTSLVEATVYARRLCQHIGDNN 499 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + + + I+AS GV+ + E AD+ LY AK GRN+V ASD Sbjct: 500 VRLQNGRLVTITASAGVTEW--LSEDKGEATIRRADQALYHAKNNGRNQVVASD 551 >UniRef50_B7K273 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Cyanobacteria RepID=B7K273_CYAP8 Length = 308 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 63/181 (34%), Positives = 100/181 (55%), Gaps = 2/181 (1%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 ++++ + +++ A D LT + NR L E A+ + + PF ++ +D+DH Sbjct: 128 LKQVQKQLQEACQTMKKLADTDELTGIANRRCLLEFAQREFQRSLRYGTPFCLLMIDVDH 187 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK IND++GH GD+ + +I LR D GR GGEEF V+LP +L A EVAER Sbjct: 188 FKNINDKYGHPNGDKAIQWVVEIIKLGLREVDFFGRFGGEEFIVVLPQTALGGALEVAER 247 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 IR + + + + + T+ ++AS+GV++ D + AD+ LY AK GRN+V Sbjct: 248 IREAIASQPLTL-EQDTVTLTASIGVATY-TGEDKTVVGMIQRADKSLYQAKAKGRNQVI 305 Query: 560 A 560 A Sbjct: 306 A 306 >UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW3_9GAMM Length = 791 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 75/291 (25%), Positives = 120/291 (41%), Gaps = 22/291 (7%) Query: 273 KNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWE 332 +++G Q ++ LT + G + + +R + Sbjct: 523 TDVEGTIQRVNATFTQLTGYTEEEAVGANPRILNSGRQDRDFYQEMFRTVRETGHWQGEI 582 Query: 333 RLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQS 392 +G + +H + + D G I + + ++ L++ Sbjct: 583 WNRRKNGEIFPLHEVVTAIHDDQGEIEYYIAMF----------------HDITRQKELEA 626 Query: 393 SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAG 452 +L+ QA++D LT NRG A+ Q + HP S++ +D+DHFK IND FGH+ G Sbjct: 627 ALEHQAFYDPLTDAANRGYFETLLDQEARRAQRYAHPCSLLLLDIDHFKRINDTFGHEVG 686 Query: 453 DRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA 512 D VL + LR DV GR GGEEF V+LPG VAE++R ++ Sbjct: 687 DEVLRFLVHALKGRLREADVLGRWGGEEFVVLLPGTDAERGQHVAEQLREQVTATAFPCV 746 Query: 513 KSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 ++ SLGV+ AD +Y+AK+ GRNRV D+ Sbjct: 747 GL----VTISLGVAECRPG--ESIRDWVKRADEAMYVAKKGGRNRVVRLDD 791 >UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW02_9GAMM Length = 595 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 67/186 (36%), Positives = 94/186 (50%), Gaps = 2/186 (1%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 ++ S + L+ + D+LT L NR +L E K P S + +D+D Sbjct: 404 VKERTSALREANEKLEKLSNTDSLTGLNNRRSLDELLAMEVKRTCRTGAPLSAMMMDIDR 463 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 FKA ND GHQ GD L AG+I+S+ R DV GR GGEEFCV+LP L A +AE Sbjct: 464 FKAFNDTHGHQVGDACLKAVAGVIASTAQRPSDVVGRYGGEEFCVLLPDTPLDGAQIIAE 523 Query: 499 RIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 RIR + + ++ + ++ S+GVS + L AD LY AK AGRN V Sbjct: 524 RIRAAVENLDFTVS-GQRVPVTISIGVSELTYCASDSGKALVEAADEALYSAKSAGRNCV 582 Query: 559 FASDNA 564 + ++ Sbjct: 583 RLALDS 588 >UniRef50_Q0A8G7 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8G7_ALHEH Length = 237 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 106/209 (50%), Gaps = 8/209 (3%) Query: 352 RGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGA 411 R D I++ +T A + + LI + R ++ Q +++ A D LT + NRG Sbjct: 28 RKDGSDITVEITTNAAYYKGVKLI--FCNCRDITERKRDQERIRYLATTDALTGIMNRGE 85 Query: 412 LFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQD 471 + P +V+ DLDHFK +ND +GH AGD VL A +++++R D Sbjct: 86 FTRHLTKEIERAARFNRPVAVVMYDLDHFKRVNDTYGHDAGDEVLKTAVAQVNNAIRRVD 145 Query: 472 VAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEET 531 V R GGEEF ++LP L A + AER+R + E + R++AS GV++ Sbjct: 146 VHARWGGEEFILLLPETDLAAAVKSAERLRAAIAEHPFKQPE----RVTASFGVTTLGPR 201 Query: 532 GDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 +D L AD LYLAK AGRNRV A Sbjct: 202 DRFDV--LIKRADDALYLAKHAGRNRVEA 228 >UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSY0_9GAMM Length = 261 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 116/215 (53%), Gaps = 8/215 (3%) Query: 351 VRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRG 410 + G + ++ L+ F L+ + + + + +Q L+ A D LT LYNR Sbjct: 40 IGGKVWNFAVPAALIIPFFVGTPLV--HNLIKSNIKLLRVQKQLEELANKDALTGLYNRQ 97 Query: 411 ALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQ 470 F+ A K C+ + FS++ +D+DHFK+INDRFGH GDRVL + +I +R + Sbjct: 98 YFFDHANEWDKRCRENSGHFSLLMLDVDHFKSINDRFGHPVGDRVLQRVSNVIKGFMRQE 157 Query: 471 DVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEE 530 D+ R GGEEF +LP + A VAERIRL + + L A+ + +S S+G ++ Sbjct: 158 DMCARYGGEEFICLLPDTNAAGAKAVAERIRLGMEHQAFLKARG--LSLSVSIGATTM-- 213 Query: 531 TGDYDFEQLQSLADRRLYLAKQAGRNRVF--ASDN 563 + + + E L AD+ LY AK GRNR A+D+ Sbjct: 214 SANDNLETLIERADQALYEAKDGGRNRAVFKAADD 248 >UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1M6_9DELT Length = 396 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 83/317 (26%), Positives = 134/317 (42%), Gaps = 21/317 (6%) Query: 244 VDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFD 303 +D W + I + +R A +N+ + L K+R G + Sbjct: 95 IDLEGRW----PLGIFLVEPDGTMRLAAHRNVPDHFILAHQKMRVGDCLCGRAARGELII 150 Query: 304 PRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALT 363 A+A H G + +L+ ++ V F + LT Sbjct: 151 TPRC--QAKASRHIAPGPMPEHGH------------LLLPLYAKERVVGVFFYYLPPDLT 196 Query: 364 LLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLC 423 L A T +S+ + + + L +++ + +D LT L+N G + Sbjct: 197 LTKAELETFQTVSYQL--GLAIDNARLYETVRRLSIYDPLTGLFNHGQFYNLLAEELSRH 254 Query: 424 QTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCV 483 Q P S++ +D+DHFK +ND +GH+AGD VL +GL+ RA D R GGEE + Sbjct: 255 QRTGRPLSLLMLDIDHFKKVNDTYGHRAGDAVLQQLSGLLKKQARAIDRVCRYGGEELAL 314 Query: 484 ILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLA 543 ILP A + AER+R + + I ++ S+G ++ + E L + A Sbjct: 315 ILPETDREAARQTAERLRRHVEKCCFATCGQQEIGVTVSIGAATCPDAA-ISAETLVNAA 373 Query: 544 DRRLYLAKQAGRNRVFA 560 DR LY AK+AGRNRV + Sbjct: 374 DRALYAAKRAGRNRVCS 390 >UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRA7_DESBD Length = 495 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 88/290 (30%), Positives = 130/290 (44%), Gaps = 11/290 (3%) Query: 273 KNLDGEYQLY-DSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSW 331 +L+G L+ ++ + + + P+ + D + + D R + D+R + Sbjct: 210 TDLEGRIYLHAPNQEQHVGRTVPEIKNSALRDMQSTPFTS-VSAADHRELVAGDTRISRY 268 Query: 332 ERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQ 391 L V + +G SI L L+ A +T+L+ + R Sbjct: 269 PLLAFASFPREMVLEPWKNHAMVYGGASIVLVLVVAGLSTLLVRGQIRLNRQ-------S 321 Query: 392 SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQA 451 L A D LT NR A E A + S I +DLDHFK +ND +GH A Sbjct: 322 RELALAASTDMLTGALNRRAFMESASREFARVCRYGGHLSCIMIDLDHFKNVNDTYGHAA 381 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GD VLS +A I+S LR D+ R GGEEF ++LPG AA VAE +R L ++ Sbjct: 382 GDLVLSSSAHYIASRLREPDMFCRYGGEEFVILLPGTDRNGAATVAEELRAGLAGLDLQR 441 Query: 512 AKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + ++AS GV+ + L SLAD+ LY AK+ GRNRV + Sbjct: 442 GDEK-LPLTASFGVAEI-HAQCATLDTLLSLADQALYEAKENGRNRVCLA 489 >UniRef50_B2SWP1 Diguanylate cyclase n=5 Tax=Burkholderia RepID=B2SWP1_BURPP Length = 516 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 89/376 (23%), Positives = 153/376 (40%), Gaps = 8/376 (2%) Query: 190 LFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNY 249 ++ P R + +F N + S E + +S + + Sbjct: 119 FDSQATPPRRVNLSDRDYFKVQRDSTNVG--LYISHPFVPKVSGKEISIAMSRRITRPDG 176 Query: 250 WYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSS--NPDHPTGNIFDPREL 307 +G + + T + L ++ G L S L +P N+ Sbjct: 177 SFGGVVVGTMRLTYFRRLFAGMNLGAGGSMALMLSDGTMLMRRPFDPKIIGINLTGTANY 236 Query: 308 ALLAQAMEHDTRGGIRMD--SRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLL 365 + Q D G +D R+ ++ +D + +++ V + + ++ + + L Sbjct: 237 SRFTQQPSGDFFGTAAIDGVERWYAFRHIDMY-PLILDVALSTRDIYVEWRHRAWIIGSL 295 Query: 366 WALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQT 425 A ++ + + + L+ A D LT L NR E A + Q Sbjct: 296 IAALDVTIIALAVLFSYQLRYRRAAEEELRVLARTDGLTGLNNRRTFEEHAEDEWRRAQR 355 Query: 426 HQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLR-AQDVAGRVGGEEFCVI 484 + P S++ +D+D FK ND +GH AGD L+ A IS S+R D A R GGEEF V+ Sbjct: 356 NAWPLSMLLIDVDSFKGFNDLYGHSAGDDALTAVARCISQSVRRPGDTAARYGGEEFAVL 415 Query: 485 LPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLAD 544 LP T AA +AE+IR + ++ S+ ++ S+G++++ L + AD Sbjct: 416 LPDTDETGAAFIAEKIRAAVQALQLRHVASSQHVLTVSIGIATTRGEAFATSRALLNAAD 475 Query: 545 RRLYLAKQAGRNRVFA 560 LY AK AGRNRV + Sbjct: 476 DALYEAKDAGRNRVLS 491 >UniRef50_B8I5B8 Diguanylate cyclase n=4 Tax=Clostridium RepID=B8I5B8_CLOCE Length = 363 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 81/225 (36%), Positives = 120/225 (53%), Gaps = 11/225 (4%) Query: 342 VRVHTLSEGV-----RGDFGSISIALTLLWALFTTMLLISWYVIRRMV--SNMYVLQSSL 394 + + LS GV + DF SI L++ ++S+ V + M+ +NM L L Sbjct: 134 IYITVLSCGVYFYTFKNDF---SILLSISPYFILGTFIVSYTVYKYMIYLNNMRALFKKL 190 Query: 395 QWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDR 454 + ++ D LT L N + R + ++ H FS++ +D+D FK IND GHQAGD+ Sbjct: 191 KEESTKDYLTGLNNVREFDKLFRLVIDRAVSNNHKFSLLLIDIDFFKKINDTHGHQAGDK 250 Query: 455 VLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKS 514 VL ++ + RA D R GGEEF ++L AS ++A E+AERIR + E E I Sbjct: 251 VLKEIGKILRHNCRANDKISRNGGEEFSILLENASNSKAIEIAERIRRIIEENEFEITSG 310 Query: 515 TTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 I ++ S+G+SS ET D Q+ AD LY AK++GRN V Sbjct: 311 RKINVTVSIGISSYPET-VSDITQIIERADGALYKAKRSGRNLVV 354 >UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZM8_9PROT Length = 578 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 57/186 (30%), Positives = 96/186 (51%), Gaps = 1/186 (0%) Query: 375 ISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQ 434 + + +S+ ++ L+ A D+LT +NR A + + +P +++ Sbjct: 388 VGVIGVLTDISDRKAMERELRRLATTDSLTGAFNRRHFLAAAGTELERANRYGNPLTLLM 447 Query: 435 VDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAA 494 +D+D+FK+IND GH GD L + +LR DV GR+GGEEF V+LP + A Sbjct: 448 LDVDYFKSINDAHGHGTGDDALRRLVEGLRHALRDIDVIGRLGGEEFAVLLPETGMAGAL 507 Query: 495 EVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAG 554 AER+R ++ + + + + + S+G+++ D E + + AD+ LY AK G Sbjct: 508 ITAERLRAQVADLRLDLPDGGQLAFTVSIGIAA-PRAEDGSVEAVLARADKALYRAKDEG 566 Query: 555 RNRVFA 560 RNRV A Sbjct: 567 RNRVCA 572 >UniRef50_Q39ZK6 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Geobacter RepID=Q39ZK6_GEOMG Length = 314 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 65/179 (36%), Positives = 98/179 (54%), Gaps = 1/179 (0%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 ++ + + L+ + D LT L+NR L E + P S++ +D+D+ Sbjct: 124 MKGLQDELKRSNEMLRTLSITDPLTHLHNRRHLMEMVDKEFQRSSRKGAPLSLVILDIDY 183 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK IND +GHQ GDRVL+ A ++ LR+ D+A R GGEEF ++LP + EA +AER Sbjct: 184 FKKINDTYGHQEGDRVLTILADIVRRRLRSYDLAARYGGEEFVLLLPETPVQEALSIAER 243 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +RL++ E + + I+ SLGV++ + + L AD LY AKQ GRNRV Sbjct: 244 LRLEVQEHVFEGSLGGLV-ITISLGVATYPSSRVESIDSLFRQADEALYRAKQGGRNRV 301 >UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5K2_HYDS0 Length = 901 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 62/182 (34%), Positives = 95/182 (52%), Gaps = 6/182 (3%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 I + ++ ++ + + D LT + NR L +K L + + P SVI D+D Sbjct: 726 ILQDITEESMIIKYFEELSIKDDLTGICNRRCLEDKLEEYLTLAKRYNRPLSVIMFDIDF 785 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK IND +GH GD+VL A ++ S++RA D+ R GGEEF +I P +L +A +AE+ Sbjct: 786 FKHINDSYGHDIGDKVLKTIANIVLSNIRATDILARYGGEEFVIISPETTLEDAKALAEK 845 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 +R ++ I+ S GV+S + + E + D LY AK+ GRNRV Sbjct: 846 LRKEIENFLFEEG----FSITCSFGVTSLNQ--EDTKETILKRVDEALYKAKREGRNRVV 899 Query: 560 AS 561 AS Sbjct: 900 AS 901 >UniRef50_Q65IC8 GGDEF-domain containing protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65IC8_BACLD Length = 362 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 106/211 (50%), Gaps = 2/211 (0%) Query: 351 VRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRG 410 + DF + + LT W L T S Y++ + + L + ++ D LT L N Sbjct: 153 ILHDFFLMKMLLTWFWILSTIGGFTSVYIVSYL-RKSHFLLKKYEEESSIDYLTGLNNVR 211 Query: 411 ALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQ 470 + S++ +D+D+FK IND +GH GD +L ++ S R++ Sbjct: 212 QFDAIWNAHISNAKEKNEKLSLLLIDIDYFKTINDTYGHSNGDAILKELGTILKKSARSE 271 Query: 471 DVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEE 530 D+ R GGEEF VILP S ++AAE+AER+R ++ I+ S I I+ S+GV++ E Sbjct: 272 DIVSRNGGEEFSVILPNCSHSQAAEIAERVRKEVETHTFFISHSKKIHITVSIGVAAFPE 331 Query: 531 TGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 E L AD+ LY AK GRNRV S Sbjct: 332 VIHSTGE-LIEKADQCLYRAKHLGRNRVCTS 361 >UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55906_SYNY3 Length = 768 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 66/178 (37%), Positives = 107/178 (60%), Gaps = 2/178 (1%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 ++N+ L+ L+ Q+ D LT+L+NR L ++ + H + V+ +D+DHFK Sbjct: 587 IANLK-LREQLEEQSLRDPLTKLFNRRYLEQRLSQELARAKRHHYSVGVLMIDVDHFKRF 645 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND GH AGDR+L+ L+ +++R DVA R GGEE +ILP A+L EA++ AE +R Sbjct: 646 NDSLGHDAGDRILASIGTLLKNNIRTSDVACRYGGEEITIILPDATLEEASQKAEFLRQA 705 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + E ++ + ++AS GV+ + G+ +++ +AD+ LY AKQAGRNRV + Sbjct: 706 IAEMKIEYSGKIVNSVTASFGVACYPDHGETG-QEIIQIADKALYDAKQAGRNRVIVA 762 >UniRef50_Q3A5K1 Two component signal transduction response regulator n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5K1_PELCD Length = 323 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 85/252 (33%), Positives = 121/252 (48%), Gaps = 21/252 (8%) Query: 325 DSRYVSWERLDHFDGVLVR--------VHTLSEGVRGDFGSISIALTLLWALFTTMLL-- 374 D R+ + + + GVL R V S G D + + + L + + Sbjct: 55 DWRWSAVDDVTDLMGVLRRRTEWQDLPVLLFSSGDERDLWMAGMEIGVSECLPMGLPMEE 114 Query: 375 ----ISWYVIRR-MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHP 429 I W++ R + ++ QS L A D+LT LYNR C P Sbjct: 115 HRIKIRWHLKNRERIHALHQAQSQLARIALTDSLTGLYNRAYFDATITQEVARCSRRGLP 174 Query: 430 FSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGAS 489 S++ VDLDHFK IND +GH AGD+ L+ A ++ R D R GGEEF VILP + Sbjct: 175 LSLLMVDLDHFKKINDTYGHLAGDQALAAVALVLKEQSRISDTVCRFGGEEFAVILPETT 234 Query: 490 LTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYL 549 AA VAERIR K+++ ++ ++AS+GV S++ T + L + AD LY Sbjct: 235 NANAATVAERIRKKISQLDLA------FPVTASIGVGSAKVTNQLLPDHLIAEADGALYE 288 Query: 550 AKQAGRNRVFAS 561 AK GRNRV +S Sbjct: 289 AKSQGRNRVQSS 300 >UniRef50_Q74EL0 GGDEF domain protein n=1 Tax=Geobacter sulfurreducens RepID=Q74EL0_GEOSL Length = 430 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 76/208 (36%), Positives = 110/208 (52%), Gaps = 8/208 (3%) Query: 362 LTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAK 421 +L + ++ S++VIRRM + ++ L+ A D LT + NR + +A Sbjct: 208 FAILLVVLLSVFGCSFFVIRRMTERLREAEAELKRIAVTDPLTGIANRRQIIHRATEEFA 267 Query: 422 LCQTHQH------PFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGR 475 + +I D+DHFK IND +GH AGD VL A I S LR D GR Sbjct: 268 RQMRRKQQRTAVPSLGIIMADVDHFKQINDTYGHSAGDDVLREIASRIGSVLRQYDAVGR 327 Query: 476 VGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYD 535 GGEEF VIL L E +AERIR ++ + +++ + IR+SASLG+++ G+ D Sbjct: 328 YGGEEFLVILSETELEETWHIAERIRRRVADDPVVV-DNQVIRVSASLGIATV-LAGEAD 385 Query: 536 FEQLQSLADRRLYLAKQAGRNRVFASDN 563 + AD+ LYLAK AGRNRV + + Sbjct: 386 YRPALERADKGLYLAKTAGRNRVMCAGD 413 >UniRef50_Q0VL34 GAF/PAS/GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q0VL34_ALCBS Length = 487 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 93/274 (33%), Positives = 121/274 (44%), Gaps = 18/274 (6%) Query: 293 NPDHPTGNIFDPRELALL-AQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGV 351 D T D E L + M R M RY+ H +G +V V V Sbjct: 225 ASDFQTITHPDDLETDLHHVEEMLTGKRSSYWMKKRYI------HKNGHIVWVLLAVSLV 278 Query: 352 RGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGA 411 R GS L+ + + T + + +R + L L A D LT LYNR Sbjct: 279 RNGDGSPRYFLSQIEDI--TAQVTAELTLREKQGELEELNQELASMARTDPLTGLYNRLV 336 Query: 412 LFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQD 471 L E R C+ P SVI +D+DHFK ND +GH GD L A + +R D Sbjct: 337 LMEGLRQEFSRCERRSEPMSVIFMDVDHFKQYNDSYGHVEGDAALQAVAEALRPVIRDTD 396 Query: 472 VAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEET 531 V R GGEEF +LP A+ +A VAER R + E L +S S+GV++ Sbjct: 397 VLARYGGEEFVALLPTANSQDAERVAERCRRAVAEISSLSR-----PVSLSVGVATLRFG 451 Query: 532 GDYD----FEQLQSLADRRLYLAKQAGRNRVFAS 561 + D E L S ADR LY+AK AGRNRV + Sbjct: 452 DEADETKSPESLLSAADRALYVAKGAGRNRVHTA 485 >UniRef50_C8VWV8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWV8_DESAS Length = 512 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 1/187 (0%) Query: 375 ISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQ 434 + + + ++ + L A D LT +YNR E + + + P S+I Sbjct: 325 VGFLITFNDITKYMNMMEELNHLASRDALTGVYNRRYFAELSSLELSKSRRYNMPASLII 384 Query: 435 VDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAA 494 +DLD FK IND +GHQAGD VL A + S+R+ D+ GR GGEEF + LP L + Sbjct: 385 LDLDFFKQINDNYGHQAGDTVLKEIADICRKSIRSIDILGRYGGEEFVIFLPNTKLEDCR 444 Query: 495 EVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAG 554 V+ RI + ++ + +I+++AS+G S E D + + AD+ LY AK G Sbjct: 445 MVSNRILNNIASA-VICYEGKSIKVTASIGTSGVEFVSDENLDHFLKTADQALYQAKLDG 503 Query: 555 RNRVFAS 561 RN + +S Sbjct: 504 RNCLRSS 510 >UniRef50_Q4KF29 GGDEF domain protein n=2 Tax=Pseudomonas fluorescens RepID=Q4KF29_PSEF5 Length = 523 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 87/331 (26%), Positives = 140/331 (42%), Gaps = 19/331 (5%) Query: 245 DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDH-------P 297 DS + GVL I + QF + + + G L S + + Sbjct: 182 DSQGNFQGVLMAGIKLAYFDQFF-TSFNIDEQGAMFLALSDGTLIARRPFEERQIGASLA 240 Query: 298 TGNIFDP-RELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFG 356 G IF A AM G+ +R + +L + V+ ++ ++G + Sbjct: 241 RGEIFSKYLPEATTGNAMITSIVDGV---TRLYGYRQLQAYPLVVAAANSKDSVLKGWYA 297 Query: 357 SISIALTLLWALFTTMLLISWYVIR------RMVSNMYVLQSSLQWQAWHDTLTRLYNRG 410 S + ++ + + L W ++ R+ +++ Q +L+ A HD+LT L NR Sbjct: 298 SAYQSTAIVALVLLGVGLFGWVFVQQVRNNERIEADLREAQEALEVIATHDSLTGLANRR 357 Query: 411 ALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RA 469 + P S++ VD+D+FK ND +GH AGD L+ A + R Sbjct: 358 LFERALTVEFGRGARQRSPLSLVMVDIDYFKRYNDTYGHVAGDHCLTEVAQALKGCCQRK 417 Query: 470 QDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSE 529 D+A R GGEEF V+LP + A +AE+IR + ++ + + S ++ SLG + Sbjct: 418 ADLAVRYGGEEFAVLLPDTDIHGALAMAEQIRRSVMQRNIAHSGSPVGCVTVSLGCYAFV 477 Query: 530 ETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 TG E AD LY AK GRNR A Sbjct: 478 PTGRDSIEMFIERADAALYQAKATGRNRAMA 508 >UniRef50_A4TZG0 GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZG0_9PROT Length = 392 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 78/209 (37%), Positives = 116/209 (55%), Gaps = 2/209 (0%) Query: 356 GSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEK 415 + ++A+ L + L + +S + + + +L+ A D LT + NR + F K Sbjct: 185 AAPAVAVWLSYTLMIALFCLSAQIYGLPLQEFTRSERTLEHLASVDPLTEVLNRRSFFAK 244 Query: 416 ARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGR 475 A+ L + Q+ PFSV+ +DLD FKAINDR GH GDRV+ A L+ ++R D+ GR Sbjct: 245 AQGLWQSHQSDGRPFSVLMLDLDRFKAINDRHGHPTGDRVIVAFARLLRDAMRHDDLLGR 304 Query: 476 VGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYD 535 +GGEEF +ILPG + +A EVAERIR E+L +R++ S+G++ + G Sbjct: 305 MGGEEFAIILPGVATAQALEVAERIRAASEAVEVLSDDGFRVRLTVSIGLALGD--GATS 362 Query: 536 FEQLQSLADRRLYLAKQAGRNRVFASDNA 564 + L AD LY AK GRNRV + A Sbjct: 363 LDDLMKRADAALYQAKDQGRNRVVMVEQA 391 >UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TNC9_9BACT Length = 494 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 79/238 (33%), Positives = 115/238 (48%), Gaps = 18/238 (7%) Query: 322 IRMDSRYVSW-ERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVI 380 RM V + ER DG+L + +S G + I AL + V+ Sbjct: 271 TRMVGALVDYSERKTDLDGLLDVMSEISSGASDEISYICEALKDMIL-----------VL 319 Query: 381 RRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHF 440 + + N+ L++ A D+LT L+NR + + + + SV+ VD+DHF Sbjct: 320 KDKMENIQSYSDRLEYLANRDSLTGLWNRRKMDQILLSETERSSRYGSSLSVVMVDIDHF 379 Query: 441 KAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERI 500 K +ND FGH+ GD VLS A L+ + RA D GR GGEEF V+LP + A E AER+ Sbjct: 380 KNVNDNFGHEVGDTVLSSIAALMKNCTRAGDSVGRWGGEEFLVVLPETDVKGALEYAERM 439 Query: 501 RLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 R + + IRI++S GV+ + + + AD LY AK+ GRNRV Sbjct: 440 RSAVEDNVF----HDDIRITSSFGVTQYRSGEPVN--EFVARADEALYDAKEKGRNRV 491 >UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479K2_DECAR Length = 721 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 67/181 (37%), Positives = 99/181 (54%), Gaps = 2/181 (1%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 +R+ + + LQ +L+ QA D+LT +NR L E + +P S++ +DLDH Sbjct: 537 LRKQLEEIEKLQVALREQAIRDSLTGCFNRRYLDETLERELSRSRREGYPLSLLILDLDH 596 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK IND +GH AGD+ L A + + +R +DV R GGEEF +++P L AAE AE Sbjct: 597 FKRINDTYGHMAGDQALIVLAETLRAGIRHEDVLCRYGGEEFVILMPRMPLAIAAERAEL 656 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 R K+ E + + +AS GV++ + G ++L AD+ LY AK GRNRV Sbjct: 657 WRSKIAEIRVTFGN-FELSFTASAGVAAYPDHGKM-PDELTQAADQALYTAKNEGRNRVV 714 Query: 560 A 560 Sbjct: 715 V 715 >UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9C4_9DELT Length = 498 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 80/264 (30%), Positives = 122/264 (46%), Gaps = 20/264 (7%) Query: 314 MEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTML 373 +EH M S V+ + H D +L+ D +++ LT F ++ Sbjct: 228 VEHLMASAAEMGSGPVNGFNILHTDPARRPEFSLTP---KDGKLVTMPLTAAHETFGCLV 284 Query: 374 LISW--YVIRRMVSNMYV--------------LQSSLQWQAWHDTLTRLYNRGALFEKAR 417 L+ Y + R + + ++ +A D LTR+YNR + E+ Sbjct: 285 LLCEPDYRLGRDQVETFRSAVNHLGLALRNALIFKEVKLRADRDGLTRIYNRHSFDERLI 344 Query: 418 PLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVG 477 K + + H S++ VDLDHFK +ND +GH+AGD VL +++ + R D+A R G Sbjct: 345 YEIKRRRRYNHDLSLLMVDLDHFKQVNDTYGHKAGDMVLRKVGEILTETFRTTDLAARYG 404 Query: 478 GEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFE 537 GEEF V+LP S A ++AERIR + ++AS+GV+S E + Sbjct: 405 GEEFVVLLPHTSEEAAWKLAERIRESIQGCVFRF-DGHEFSVTASIGVASVEAGALTRDD 463 Query: 538 QLQSLADRRLYLAKQAGRNRVFAS 561 L AD+ LY AK GRN V S Sbjct: 464 DLLIKADKALYKAKNNGRNMVVIS 487 >UniRef50_B8FCK6 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCK6_DESAA Length = 301 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 61/182 (33%), Positives = 92/182 (50%), Gaps = 1/182 (0%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 I+ + ++ LQ A D LT LYN + + + S + D+D Sbjct: 121 IKELYESLQETNRQLQELANRDGLTGLYNHRYFQDAMTKDFQRAMRYHESLSCVLCDIDF 180 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK ND +GHQ GD VLS A ++ SLR D+A R GGEEF ++L A VAER Sbjct: 181 FKKFNDTYGHQTGDIVLSTLARIVEDSLRDTDLAARYGGEEFALVLYHTPAAAAFMVAER 240 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 +R + + E + A ++ ++ S+GV++ D + L AD+ LY AK+ GRN+V Sbjct: 241 LRESVEQHEFI-ANDLSLSVTISVGVATYPHPDIPDHKTLIECADKALYKAKENGRNQVI 299 Query: 560 AS 561 + Sbjct: 300 SF 301 >UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087A8_SHEFN Length = 321 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 5/188 (2%) Query: 374 LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 LI I ++ Y L+S L+ A D LT L+NR + + PFS++ Sbjct: 139 LIGLIGISTDITAAYHLRSKLERLANTDPLTGLFNRRSFTSFCEHEFFRATRYFQPFSLM 198 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEA 493 +D+D FK +ND +GH GD V+ A + + +R DV R+GGEEF ++LP + A Sbjct: 199 IIDIDLFKKVNDTYGHLVGDEVIKRVANICNEHVREADVLARIGGEEFAILLPDTDIDSA 258 Query: 494 AEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 +AER+R E + + T I+ S+GV++ + D F ++ AD+ LY +K Sbjct: 259 YVLAERLR----EAQQQYEEQKTPSITISIGVATLR-SQDKAFLEIFKRADKALYSSKNV 313 Query: 554 GRNRVFAS 561 GRN V + Sbjct: 314 GRNSVNVA 321 >UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EI0_THICR Length = 620 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 67/180 (37%), Positives = 95/180 (52%), Gaps = 5/180 (2%) Query: 379 VIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLD 438 V+ ++ +S L+ HD LT +YNR K Q +Q PFS+ +D+D Sbjct: 438 VLMTDITEEEHYKSQLEHLIIHDELTGVYNRHYFNRTLEQEIKRHQRYQSPFSMAFMDID 497 Query: 439 HFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 HFK IND +GH GD VL A ISS LR+ DV RVGGEEF +++P SL A ++E Sbjct: 498 HFKMINDTYGHDVGDAVLVSLAKNISSLLRSTDVFCRVGGEEFVIMMPETSLENALIISE 557 Query: 499 RIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 RIR + + +K +I+ S+G+ + + AD LY AK+ GRNR+ Sbjct: 558 RIRSTVEG---ISSKDVPEKITISMGLVELNSW--DNVQSFYKRADEALYKAKENGRNRI 612 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 250 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 83/284 (29%), Positives = 128/284 (45%), Gaps = 12/284 (4%) Query: 281 LYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGV 340 L D + ++N + ++ L+ +E G+ + + E++ + Sbjct: 21 LEDQDYSVIEATNGPQALDLLQSHDDIDLVLLDVEMPKMSGLEVLRKIKQDEQIKDLPVI 80 Query: 341 LVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSS--LQWQA 398 LV + GD ++ L L + ++ R+ S + + ++ A Sbjct: 81 LVTAN-------GDDQNVVDGLDLGAVDYVIKPYSLSVLLARVRSALREKERLDLMEKWA 133 Query: 399 WHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSH 458 D LT LYNR FE+A+ + Q ++ S I +D+DHFK +ND +GH GD VL Sbjct: 134 TTDPLTGLYNRRFFFEQAQRELERVQRNETDASFIILDIDHFKKVNDEYGHLVGDDVLEG 193 Query: 459 AAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIR 518 A L + R D+ R GGEEF + LP A VAER R K+ E K + Sbjct: 194 LAKLFKETFRKVDLCCRFGGEEFVICLPDTDTEGALLVAERTRKKVEELSFNTEKG-PLH 252 Query: 519 ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 ++ SLGVSS+ E + E + AD LY AKQ GRNR + D Sbjct: 253 VTISLGVSSANE--NTTLEDMLKRADDALYQAKQNGRNRTESLD 294 >UniRef50_Q2VZ27 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VZ27_MAGSA Length = 355 Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 64/171 (37%), Positives = 90/171 (52%), Gaps = 1/171 (0%) Query: 392 SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQA 451 + L+ A D+LT+ NR A + F+++ +D+DHFK IND +GH A Sbjct: 186 AELEELASRDSLTQTANRRHFEHLAGLELDHARRMGRSFALLALDIDHFKRINDTWGHAA 245 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GD L A SLR D+ GR+GGEEF V LP A +AER+R + E + Sbjct: 246 GDEALKAFANACRLSLREYDILGRIGGEEFAVALPNTGPDGARVIAERLRAAVEELVVRP 305 Query: 512 AKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 AK ++ S+G++ E GD E + AD+ LY AK +GRNRV A + Sbjct: 306 AKGELFDLTVSIGIAQLRE-GDLTVETMLERADQALYRAKNSGRNRVMAEE 355 >UniRef50_C7I354 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thiomonas intermedia K12 RepID=C7I354_THIIN Length = 752 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 84/314 (26%), Positives = 138/314 (43%), Gaps = 12/314 (3%) Query: 252 GVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLA 311 GV+ + ++Q + + + +S + + + D +F + L Sbjct: 433 GVVTSMQDITAIKQLQQQLSEDEQRFRFLAEESPVPLVITRTSD--AALLFSNKAADSLF 490 Query: 312 QAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTT 371 + + G M + D L R + GV F T +W L + Sbjct: 491 RGSYAEHAGQS-MRPLWGDSVDRDQLLARLQREGGIVRGVEAQFRR--FDGTEVWLLLSV 547 Query: 372 MLLI-----SWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTH 426 + + ++ +S L+ A+ DTLT + NR +A + Q Sbjct: 548 TRGRYRDDDALIFAFKDITEAKARESELRNLAYTDTLTGIPNRRYFLARAALELRRAQRE 607 Query: 427 QHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILP 486 PF V+ +D+D FK INDRFGHQ GD V+ A LR D+ GR+GG+EF ++LP Sbjct: 608 GSPFVVLALDIDRFKQINDRFGHQVGDAVIRCFAQTCMQQLRGPDLCGRLGGDEFAILLP 667 Query: 487 GASLTEAAEVAERIRLKLNEKE-MLIAKSTTIRISASLGVSSSEETGD-YDFEQLQSLAD 544 + A +VA+R+RL + E + + + ++ S+G++ T D ++L AD Sbjct: 668 QTTRQVAFDVAQRLRLSIQEASCLPSSAPDGLTLTTSIGIAEFLPTSTLMDADELLDRAD 727 Query: 545 RRLYLAKQAGRNRV 558 + LY AKQAGRNRV Sbjct: 728 QALYRAKQAGRNRV 741 >UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6I3_LARHH Length = 350 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 102/192 (53%), Gaps = 1/192 (0%) Query: 371 TMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPF 430 T L + I + + + L+W D LT LYNR ++ + A+ + H P Sbjct: 153 TDFLERFAAIVTLCLENVLNRERLKWLGLTDPLTGLYNRRYFEQRLQEEAQRTRRHGDPL 212 Query: 431 SVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASL 490 + + +D DHFK IND +GHQAGD VL A + LR DVA R+GGEEF V+LP + Sbjct: 213 ACLMLDADHFKRINDTWGHQAGDVVLKVLARRVRQQLRGCDVAARIGGEEFAVLLPSTPV 272 Query: 491 TEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVS-SSEETGDYDFEQLQSLADRRLYL 549 VAERIRL + + + ++ +++S SLG + + D E+L + AD LY Sbjct: 273 RHVQLVAERIRLAIAGEPVHVSPDCVLQVSVSLGAAMLAPGAADISPERLMARADAALYQ 332 Query: 550 AKQAGRNRVFAS 561 AK+ GRNR + Sbjct: 333 AKRNGRNRTMLA 344 >UniRef50_C1A5L7 Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5L7_GEMAT Length = 491 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 98/196 (50%), Gaps = 1/196 (0%) Query: 364 LLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLC 423 L +A ++ +MV + + L+ A D LT+L NR AL E+ + Sbjct: 294 LEFAQAVITAAVAVIQRAQMVESTMADNARLEQLAQTDPLTQLLNRRALTERITAEMERA 353 Query: 424 QTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCV 483 + +++ +DLDHFK +ND +GH GD VL L+ ++R D+ R GGEEF V Sbjct: 354 LRYDSTLALLMIDLDHFKKVNDTYGHLVGDDVLRDVGQLLGHTIRGSDITARYGGEEFLV 413 Query: 484 ILPGASLTEAAEVAERIRLKLNEKEMLIAK-STTIRISASLGVSSSEETGDYDFEQLQSL 542 +LP A AERIR+ + E + ++++AS+GV+ + E L + Sbjct: 414 LLPETDDAGAVAFAERIRVAMEEHPFARDSMAEPLKLTASIGVAVFPAARIENVEDLFAR 473 Query: 543 ADRRLYLAKQAGRNRV 558 AD LY AK GRNRV Sbjct: 474 ADAALYRAKAEGRNRV 489 >UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clostridium thermocellum RepID=A3DEY5_CLOTH Length = 550 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 86/311 (27%), Positives = 136/311 (43%), Gaps = 22/311 (7%) Query: 263 MQQFLRNAIDKNLD------GEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALL-----A 311 +++ L++ D + LYD L T NI + +EL +L Sbjct: 243 VRELLKSVNDIIIGVMGVSSSTIILYDENKGRL-----KVHTTNITNRKELIILNDNINC 297 Query: 312 QAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGV--RGDFGSISIALTLLWALF 369 Q + + G + +V E +G + + FG + I A Sbjct: 298 QKLLDALQKGEPILENFVDMEEYPFVEGRGIHSLLCVPLITKAKKFGLVLIEHKYFNAFD 357 Query: 370 TTMLLISWYVIRR--MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQ 427 L + + ++ + L + A D+LT +YNR E+ R + Sbjct: 358 DNNLRLLNIIGQQVGIAMENVELYQRMHEMATIDSLTGIYNRLYFQERLREEFANAKKEN 417 Query: 428 HPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPG 487 + S+ +D+DHFK ND FGH GD+VL H A L+ SLR+ D+ R GGEEF ++LP Sbjct: 418 YDLSLAIMDIDHFKRFNDTFGHLFGDKVLKHIAHLMKKSLRSGDIIARYGGEEFVILLPR 477 Query: 488 ASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRL 547 S+ EA + ER+R + + + + ++ S GVSS E + + E L AD L Sbjct: 478 TSVKEAYDKVERLRNIVAKTTIK-DELVEASVTVSFGVSSYPEFANTESE-LLKTADNAL 535 Query: 548 YLAKQAGRNRV 558 Y AK++GRN V Sbjct: 536 YDAKESGRNCV 546 >UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YVG8_9CYAN Length = 329 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 81/307 (26%), Positives = 134/307 (43%), Gaps = 11/307 (3%) Query: 264 QQFLRNAIDKNLDGEYQLYD---SKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRG 320 Q FL +D L D +T + E L+ + Sbjct: 6 QNFLVLVVDDITRNLQVLADMLEQVGYEVTFATDGQQALERAKVAEPDLILLDLMMPKMN 65 Query: 321 GIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDF--GSISIALTLLWALFTTMLLISWY 378 G+ + + + E+L + + E + F G++ +A + Sbjct: 66 GLEVCQKLKNDEKLCEIPVIFLTASEEKEHLLEAFKQGAVDYITKPFYAPELLARVRVHL 125 Query: 379 VIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLD 438 ++ + ++ + QA D LT ++NR L + + + FS+I +D+D Sbjct: 126 ELKYTKDELNKKSAAFEKQAITDPLTGIFNRRHLMSISEIEYQKAVNYNRLFSIIMLDID 185 Query: 439 HFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 HFK +ND +GH GD+VL + + LR DV GR GGEEF +ILPGA L A ++AE Sbjct: 186 HFKKVNDTYGHIVGDQVLKRMTQEVQNLLREGDVCGRFGGEEFAIILPGADLKIALKIAE 245 Query: 499 RIRLKLNEKEMLIAKSTT-----IRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 R+R + + + I S + I+I+ SLGV++ D +++ AD LY AK Sbjct: 246 RLRQAIADFYIPIYDSNSSSNLKIKITISLGVTTY-HIDDDKLDKMWRRADDALYQAKAK 304 Query: 554 GRNRVFA 560 GRN+V + Sbjct: 305 GRNQVCS 311 >UniRef50_B1G121 Diguanylate cyclase n=4 Tax=Burkholderia RepID=B1G121_9BURK Length = 524 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 92/370 (24%), Positives = 164/370 (44%), Gaps = 10/370 (2%) Query: 201 GYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIP 259 + + +F+ H + N + + + + ++ + D N + GV ++I Sbjct: 149 RFTDRDYFVVH--QRNPAVGLYLSHPFRSRLRDGKLSIGLTRRINDENGGFAGVALLAIR 206 Query: 260 VRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSS--NPDHPTGNIFDPRELALLA--QAME 315 + Q+ L + I G + + +P +I +A + Sbjct: 207 IEYFQRLL-DRISVGQHGSVFIAMDDGTLIARKPYSPRDIGASIAGSPTFLRMAAQRDGS 265 Query: 316 HDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLI 375 + R + R ++ + ++ V + V + ++ + L F T+ +I Sbjct: 266 YVARSAVDGVQRMFTFVHVP-GTPLIAAVAPAVDDVLSPWRHRAMIVGALTLAFGTVFVI 324 Query: 376 SWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQV 435 +++ + + Q++L A D LT L NR L + + + P S + + Sbjct: 325 VSWLLAFALRDKLRAQAALMRLAATDPLTGLSNRRVLDNRLDEEWRRARRTGQPLSALFI 384 Query: 436 DLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAA 494 D+DHFK ND +GH +GD LS A ISS++ RA D+ R GGEEF VILP S AA Sbjct: 385 DIDHFKRFNDTYGHASGDDALSAVAECISSTVRRAVDLVARYGGEEFAVILPDTSADGAA 444 Query: 495 EVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAG 554 VAE+IR + +++L ++ ++ S+G ++ + L + ADR+LYLAK AG Sbjct: 445 AVAEKIRRNVQAQDILHGGDGSVAVTVSVGCATMVPAQGANALDLLAAADRQLYLAKAAG 504 Query: 555 RNRVFASDNA 564 RNRV +A Sbjct: 505 RNRVSCGRSA 514 >UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBK1_DESAH Length = 430 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 101/182 (55%), Gaps = 6/182 (3%) Query: 379 VIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLD 438 V ++ + ++ + L+ QA D LT ++NR + K + ++ S+I D+D Sbjct: 253 VQKKNLQSLEGINELLEKQASTDALTGIFNRMKFNQTLTSEIKRAKRYRVALSLILFDID 312 Query: 439 HFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 HFK +ND +GH +GD VL H A L++S+LR D+ R GGEEF + P SL A ++AE Sbjct: 313 HFKQVNDSYGHLSGDTVLKHLARLVASNLREIDIFARWGGEEFVIQAPETSLESAIKLAE 372 Query: 499 RIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 ++R K+ K +I+ S GV++ + D D L + AD LY AK+ GRN+V Sbjct: 373 KLRSKIENYVFPAPK----KITVSFGVATFR-SSDNDI-TLVNRADEALYRAKEGGRNQV 426 Query: 559 FA 560 + Sbjct: 427 VS 428 >UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6Y0_KANKD Length = 469 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 62/180 (34%), Positives = 99/180 (55%), Gaps = 2/180 (1%) Query: 381 RRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHF 440 R + + + L+ A D+LTR+ NR +++ + ++ +D DHF Sbjct: 283 ERALIELKAVNQKLEELAATDSLTRVANRREFMKRSEEEMSRSSRNSTDLCLMVIDFDHF 342 Query: 441 KAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERI 500 K IND++GHQAGD+VL L +R D+ GR+GGEEF ++LP ++ A +VAER+ Sbjct: 343 KEINDQYGHQAGDKVLKDFVKLAKEVMRPSDLLGRIGGEEFALLLPETNIRSAVKVAERL 402 Query: 501 RLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 R + E+ ++I S I+++ S+GV+ + D ++ AD LY AK GRNRV Sbjct: 403 RQHIEEESIVIG-SKRIKLTISIGVAEYQPKVD-TVKKWLHRADEFLYQAKDKGRNRVVV 460 >UniRef50_A9AKV8 Diguanylate cyclase n=24 Tax=Burkholderia RepID=A9AKV8_BURM1 Length = 529 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 93/377 (24%), Positives = 148/377 (39%), Gaps = 8/377 (2%) Query: 189 TLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVD-SN 247 + ++ R + P+F H R+ + P + +S + ++ Sbjct: 141 AVDGKSDVPRNANFADAPYFSVH--RDRPDVGLYVSDPYRSRLRGGSPSIALSRRITRAD 198 Query: 248 NYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFL-TSSNPDHPTGNIFDPRE 306 + G+ MSI + + + + + + + +P NI Sbjct: 199 GSFGGIAVMSIRLEYFRDLFSRLALGDRGAMSLIGTNGVMVMREPYDPKIVGRNISQAST 258 Query: 307 LALLAQAMEHD--TRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTL 364 +A E R I R ++ LD+ +++ V + + +I + Sbjct: 259 FRQFMRAREGSFFDRASIDGVRRLYAFRHLDNL-PLIMMVAESESEIYAAWYDRAIPIGS 317 Query: 365 LWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQ 424 AL + ++ + + ++ LQ A D LT L NR L + Sbjct: 318 AMALLALGFVGLSLLLDVQLRKRHRAETELQALARTDGLTGLDNRRMLDVTLAREWRRAA 377 Query: 425 THQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLR-AQDVAGRVGGEEFCV 483 QH S++ VD+DHFK ND GHQAGD L+ I+ LR D A R GGEEF V Sbjct: 378 RSQHALSLLFVDVDHFKRYNDSQGHQAGDDALAAVGRCIAGCLRRPADYAARYGGEEFVV 437 Query: 484 ILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLA 543 ILP A +AE IR + E + S ++AS+GV++ D D LA Sbjct: 438 ILPDIGSDGAVAIAETIRTSILELGIRHDGSAFGCLTASIGVATCRPDRDDDMHAALKLA 497 Query: 544 DRRLYLAKQAGRNRVFA 560 D LY AK+ GRNRV Sbjct: 498 DDALYRAKETGRNRVVV 514 >UniRef50_B6BNQ1 Diguanylate cyclase n=2 Tax=cellular organisms RepID=B6BNQ1_9PROT Length = 565 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 8/209 (3%) Query: 360 IALTLLWALFTTMLLISWYV--------IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGA 411 +A + +F T+LL + Y+ + + +++ L +A D L+ L+NR Sbjct: 355 LAGAFIEIIFFTLLLTNRYLDTYSANKCLTMQTKELQEIKAQLTIEAKTDLLSGLHNRRY 414 Query: 412 LFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQD 471 E ++ + ++ S+I +DLD FK IND +GHQ GD V+ A ++ R D Sbjct: 415 FSEMSQKSFLQAKRYEENLSIILLDLDKFKKINDTYGHQTGDIVIKVTADILKYLNREDD 474 Query: 472 VAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEET 531 + R GGEEF ++LP +L EA +AE IR K+ E+ ++AS+GV+ + Sbjct: 475 IVARYGGEEFIILLPHTNLYEALVIAENIRKKIESTEIHSESDDIFHVTASIGVAQLDTI 534 Query: 532 GDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 D + + D +Y AKQ GRN+VF+ Sbjct: 535 NDENISKTIQRCDNAMYKAKQRGRNKVFS 563 >UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFS2_CARHZ Length = 543 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 62/171 (36%), Positives = 100/171 (58%), Gaps = 2/171 (1%) Query: 393 SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAG 452 L+ A D LT LYNR E+ + H+ ++++ +D+D+FK IND +GH G Sbjct: 374 RLKELAQKDELTGLYNRRYFLERLNEEHLRSRRHKLNYTIVLLDIDYFKKINDTYGHDCG 433 Query: 453 DRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA 512 D VL+ + +LR D++ R GGEEF V+LP EA +AER+R K+ E+ +LI Sbjct: 434 DLVLNDFGRFLKDTLRRTDLSARYGGEEFVVLLPQTGKKEAYLLAERLREKVKER-VLIF 492 Query: 513 KSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 + ++ + S+G+++ E + + +L SLAD+ LY AK GR++V +N Sbjct: 493 QGQKVKYTVSMGLAAYPEDAEE-YRELLSLADKALYQAKNRGRDKVVMVNN 542 >UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5N6_ALHEH Length = 419 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 73/288 (25%), Positives = 115/288 (39%), Gaps = 22/288 (7%) Query: 273 KNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWE 332 + +G + +T D G + D + + Sbjct: 151 TDTEGCIVYVNRGFEQITGYRRDEVLGETPAVLNSGEQSARFYRDLWTTLERGETFRGTF 210 Query: 333 RLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQS 392 + G L + VR D G + + + + ++ ++ Sbjct: 211 LNRNRSGALFYLEQSITPVRADQGQV----------------VRYVATGKDITERVRMEE 254 Query: 393 SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAG 452 L+ A D LT L NR + + + C+ + S++ DLDHFKA+ND GH+AG Sbjct: 255 ELKRAATTDALTGLANRLSFEQLLERDYERCRRYGGALSLLMFDLDHFKAVNDAHGHEAG 314 Query: 453 DRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA 512 D VL AGL+ +++R D R GGEEF V+LP L A E+AE++R ++ Sbjct: 315 DAVLQALAGLVLANVRTADTVARWGGEEFMVLLPETPLAAAGELAEKLRERVAAHRFPHG 374 Query: 513 KSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 ++AS GV + + D L AD LY AK GR+RV Sbjct: 375 A----PVTASFGVCALRD--DDTCRTLVRRADEALYRAKHLGRDRVEC 416 >UniRef50_C4XS30 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XS30_DESMR Length = 498 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 66/170 (38%), Positives = 97/170 (57%), Gaps = 1/170 (0%) Query: 392 SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQA 451 + ++ +A HD LTR++NR A E+ + Q ++H S++ VD+DHFK INDR+GH Sbjct: 313 NQVKIRADHDGLTRIHNRRAFDERLIDELRRHQRYRHAMSLLMVDIDHFKGINDRYGHLV 372 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GD VL ++S +LR+ D R GGEEF VILP + +A +AER+R + E + Sbjct: 373 GDHVLREVGSILSETLRSTDFTARYGGEEFVVILPQTAEEQARILAERLRGAIAEARF-V 431 Query: 512 AKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 I+ S+GVS+ + + L AD+ LY AK GRN+V S Sbjct: 432 HDGEDFSITVSIGVSALQPGALTRRKDLLEKADKALYQAKHLGRNQVCTS 481 >UniRef50_Q3JE99 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Nitrosococcus oceani RepID=Q3JE99_NITOC Length = 661 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 70/182 (38%), Positives = 105/182 (57%), Gaps = 2/182 (1%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 +R ++++ V L A D+LT L NR E+ + +Q PFS + +DLD Sbjct: 455 VRGYLADLAVANRRLGQMAMTDSLTGLPNRRYAMERMEQAWAEYERNQTPFSCLVMDLDF 514 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK +ND++GH+ GD VL A + S R+ D+ R+GGEEF V+ P TEA +VAER Sbjct: 515 FKRVNDQYGHEIGDSVLLEIANVFRGSARSSDIICRLGGEEFLVVCPHTVATEAFQVAER 574 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 +R + E + ST++ +S S+G+++S E G + L LAD+ LY AK+ GRNRV Sbjct: 575 LRRAVEEHSWTMLDSTSV-LSVSIGLAASSE-GMQHWNDLYRLADQALYQAKRNGRNRVC 632 Query: 560 AS 561 + Sbjct: 633 MA 634 >UniRef50_Q47Y21 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y21_COLP3 Length = 722 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 63/181 (34%), Positives = 95/181 (52%), Gaps = 1/181 (0%) Query: 381 RRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHF 440 ++ + Q Q A D LT NR E H P S++ +D+DHF Sbjct: 541 QKEIKYRKSQQDHFQQLALTDALTGAVNRHHFNEVLDQEIANVNNHGSPLSIMLLDIDHF 600 Query: 441 KAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERI 500 K++NDR+GH GD VL ++R+ DV R+GGEEF +I+P L A + AER+ Sbjct: 601 KSVNDRYGHGVGDEVLVMFYQTCVEAVRSSDVVARIGGEEFVIIMPNTQLVNAQKFAERL 660 Query: 501 RLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 R K+ + E+ IA + I ++ S+GVS + + E + AD+ LY AK +GRN+V Sbjct: 661 RQKIAKLELNIANNQ-ISVTVSIGVSQWQSEYFTNAETFVAHADKSLYQAKNSGRNKVVV 719 Query: 561 S 561 + Sbjct: 720 A 720 >UniRef50_C6BSU0 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BSU0_DESAD Length = 333 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 70/182 (38%), Positives = 104/182 (57%), Gaps = 2/182 (1%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 I V+ + + S L Q D+LT LY R LF + R + + P SVI +D+D+ Sbjct: 152 IISTVAAISIENSRLFRQTIEDSLTGLYMRRYLFIRMREEIQRFKRRGGPLSVIMIDVDN 211 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQ-DVAGRVGGEEFCVILPGASLTEAAEVAE 498 FK +ND +GH GD VL ++ + R D+ R GGEEF +++PG+ EA VAE Sbjct: 212 FKNVNDTYGHATGDAVLRSVGHILHENSRQGVDIPCRYGGEEFVILMPGSEKREAEIVAE 271 Query: 499 RIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 RIR + + + I+I+AS G++S EE + + L ++AD+RLY AK++GRNRV Sbjct: 272 RIRAACEDATISAPEGK-IKITASCGIASVEECQEPSADALLNIADKRLYCAKESGRNRV 330 Query: 559 FA 560 A Sbjct: 331 VA 332 >UniRef50_Q31IP8 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31IP8_THICR Length = 540 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 67/180 (37%), Positives = 96/180 (53%), Gaps = 1/180 (0%) Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 +++ + L + L+ +A D LT L NR A FE+A + + H P S++ +D+DHFK Sbjct: 356 KLMEQLGSLLNQLRDEATKDYLTGLLNRKAFFEQAEQIWLSAKEHHQPISLLMIDIDHFK 415 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 IND FGH AGDRVL A + S + R +D+ R GGEEF ++L E A R++ Sbjct: 416 RINDSFGHDAGDRVLIEVANVFSQNCREEDLVCRYGGEEFIILLENKDEQPTLEFASRLK 475 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + E + + IR S S+GV++ E S AD+ LY AK GRNRV Sbjct: 476 KVIQEMSV-SEQGEVIRFSISVGVATGSALELNSIETFISHADQALYQAKANGRNRVEVF 534 >UniRef50_Q39S35 Diguanylate cyclase with GAF sensor n=2 Tax=Geobacter RepID=Q39S35_GEOMG Length = 686 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 88/262 (33%), Positives = 125/262 (47%), Gaps = 22/262 (8%) Query: 309 LLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGV--------RGDFGSISI 360 LL +E D R GI R+ + F + +++ GV +G F + Sbjct: 418 LLVNDIEKDKRIGIPNRPRF----KTKSFVSIPIKLRESVAGVLNLSDKKNQGIFTENDL 473 Query: 361 ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA 420 L + +A ++++ I R L+ + D LT LYNR L + Sbjct: 474 NLLITFADHASIMIERALSIERA--------DFLEQLSITDPLTGLYNRRFLKRRMEEEL 525 Query: 421 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 +V+ +DLD+FK ND GH AGDR L A ++S + R DV R GGEE Sbjct: 526 ARSIRQNLSLTVMLIDLDNFKIYNDLCGHLAGDRALKKMARILSDTARQMDVVTRYGGEE 585 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKS-TTIRISASLGVSSSEETGDYDFEQL 539 FC+ILPG S E+ VAERIR ++ +E ++ R++AS+GVSS E G+ + L Sbjct: 586 FCIILPGTSKKESLFVAERIRREIEGEEFSHEENLPQGRLTASIGVSSFPEDGNVEA-VL 644 Query: 540 QSLADRRLYLAKQAGRNRVFAS 561 AD LY AK GRNRV S Sbjct: 645 VKAADVALYRAKSEGRNRVVIS 666 >UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=Cyanothece RepID=B7JZG8_CYAP8 Length = 668 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 65/174 (37%), Positives = 96/174 (55%), Gaps = 2/174 (1%) Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLA-KLCQTHQHPFSVIQVDLDHFKAINDRF 447 L+ +L+ Q+ D LT L+NR L + Q + +I +D+DHFK ND F Sbjct: 491 KLRETLEEQSLRDPLTGLFNRRYLEISINRELNTIIQDQDYSLGLIMLDIDHFKQFNDNF 550 Query: 448 GHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEK 507 GH+AGD VL A + + +R D+A R GGEEF +ILP ASL + E AE+IR + + Sbjct: 551 GHEAGDLVLQTVANCLQNHIRQSDIACRFGGEEFMIILPRASLNKTLERAEKIRESIKQL 610 Query: 508 EMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 ++ I+AS GV++ + G +L AD+ LY AK+ GR+RV + Sbjct: 611 KIEYKSQPLDSITASFGVAAFPQNG-TTLHELFIDADKALYQAKKQGRDRVVCA 663 >UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desulfovibrio RepID=Q310L5_DESDG Length = 525 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 63/176 (35%), Positives = 94/176 (53%), Gaps = 1/176 (0%) Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 +L ++ QA HD LT+L+NR + R + P +++ +D+D+FK INDRFG Sbjct: 342 LLFREMRLQADHDGLTQLHNRRHFDTRLREELDRHGRYSMPLTLMMLDIDYFKQINDRFG 401 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 HQAGD VL A ++ ++R D R GGEEF ILP +A +AER+R + E Sbjct: 402 HQAGDAVLRELASVLRETIRTTDYCARYGGEEFVAILPHTDEQQARVLAERLRKNI-ESR 460 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 + TI+ + S+G++ + ++L AD LYLAK GRN V + Sbjct: 461 VFRHHGKTIQATVSIGLTGFKPGALTPRDELVREADAALYLAKANGRNVVCTFAGS 516 >UniRef50_Q486E7 Sensory box/GGDEF domain protein n=2 Tax=Proteobacteria RepID=Q486E7_COLP3 Length = 428 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 5/266 (1%) Query: 294 PDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSR-YVSWERLDHFDGVLVRVHTLSEGVR 352 + ++F E ++ Q + + YV + D ++ +G+R Sbjct: 163 FNEAAQSMFGYSEQEIMGQPLTKLLPEKYQAKHHGYVEGFKRSQVDSRPMQTRAAVQGLR 222 Query: 353 GDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGAL 412 D +I +T+ + + + R +S L L + D LT LYNR Sbjct: 223 KDGSEFAIEVTISKIRIADN--VEFTAVIRDISEKNQLLEELILSSRRDPLTELYNRRYF 280 Query: 413 FEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDV 472 E + + FS++ +D+DHFK+INDR+GH GD L + +++S+R D Sbjct: 281 TELLHSEITRSRRFKRGFSLLMLDIDHFKSINDRYGHACGDAALIAFSKAVTNSIREVDT 340 Query: 473 AGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETG 532 R GGEEF V+LP A VAE+IR + E I + I+++ S+G+ Sbjct: 341 ICRWGGEEFLVLLPEIPKVTAMVVAEKIRKNIENLE-TIYEGDLIKVTVSIGL-EYFSGD 398 Query: 533 DYDFEQLQSLADRRLYLAKQAGRNRV 558 + + + D+ LY AK GRN++ Sbjct: 399 AIEMSSMINKVDQILYRAKDTGRNKI 424 >UniRef50_A4C957 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C957_9GAMM Length = 639 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 106/197 (53%), Gaps = 6/197 (3%) Query: 364 LLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLC 423 L+ +LF +L++ + R V + L A D+LT+L NR F A+ + K Sbjct: 446 LVNSLFAAILILLSVFVYRQV----KVSKRLNRLANTDSLTQLANRRYTFHFAKIVFKEA 501 Query: 424 QTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCV 483 Q Q P S+I D+DHFK IND +GH GD VL A + LR D+ GR+GGEEF V Sbjct: 502 QIEQKPLSIIIFDIDHFKRINDNYGHPFGDEVLMAVADKAQAGLREPDLLGRIGGEEFMV 561 Query: 484 ILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLA 543 +L + +A E+AER+R + + A+ ++++AS GV+ D DF L A Sbjct: 562 VLKNTPINQAVEIAERMRELIAQLSFAAAQQQ-VKVTASFGVAQFNVDVD-DFGSLFQHA 619 Query: 544 DRRLYLAKQAGRNRVFA 560 D LY AK AGRN+V Sbjct: 620 DEALYRAKNAGRNQVVC 636 >UniRef50_B5JTF6 Signaling protein with membrane-bound sensor domain and ggdef domain n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTF6_9GAMM Length = 782 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 69/191 (36%), Positives = 114/191 (59%) Query: 368 LFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQ 427 T + L+++ ++ +VS + ++ ++ + D LT+++NR ++ + + Sbjct: 590 FITFLSLLAFVLMGYVVSRWSLREAEVRQLSLVDPLTQIHNRLSIMQVLDQALSQHRREG 649 Query: 428 HPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPG 487 P +V+ +D+DHFKAIND +GH GDR+L+ AA +++++LR D GR GGEEF ++L G Sbjct: 650 SPIAVVMLDIDHFKAINDNWGHPVGDRILTSAASVLANNLREFDEIGRYGGEEFLLVLQG 709 Query: 488 ASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRL 547 + A +AER R L ++L + +I +SAS GV++S+ D E L ADR L Sbjct: 710 TDVDGAVVMAERCRQSLATIQVLSDEGASIGVSASFGVAASQAQQPTDIEALIQRADRAL 769 Query: 548 YLAKQAGRNRV 558 Y AK+ GRNRV Sbjct: 770 YRAKEKGRNRV 780 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 59/199 (29%), Positives = 89/199 (44%), Gaps = 3/199 (1%) Query: 367 ALFTTMLLISWYVIRRMVSNMYVL-QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQT 425 F + + ++ + L ++ Q+ D LT ++NR +LF+ Sbjct: 171 LFFAAPHIFFQVAVAALILGQWRLREAEAIRQSLTDALTGIHNRRSLFQILDRQVAHAHK 230 Query: 426 HQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVIL 485 + P +V +DLDHFK IND +GH GD L AA ++ L D GR GGEEF +++ Sbjct: 231 QEEPLAVALLDLDHFKRINDEYGHPTGDAALKAAAAVLEKGLSEGDSVGRFGGEEFMLVM 290 Query: 486 PGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDF--EQLQSLA 543 P S ++ + E +R L E I + S GV + + +A Sbjct: 291 PNCSRSQCQQRCEALRKSLERVECYSENGEAIALRGSFGVVWYSGQSQRPLVSDGVVQVA 350 Query: 544 DRRLYLAKQAGRNRVFASD 562 D LY AK AGRN+V D Sbjct: 351 DAALYRAKNAGRNQVVLQD 369 >UniRef50_Q1JZ09 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ09_DESAC Length = 521 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 111/200 (55%), Gaps = 4/200 (2%) Query: 364 LLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLC 423 +L A+ +LL + + R +Y+ Q L + D LT LYNR K Sbjct: 324 VLVAMAIIVLLTCYLFVSR--RKLYLAQQKLMRISERDPLTGLYNRRKFMNYYEKEWKAA 381 Query: 424 QTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFC 482 Q + P +V+ +D+DHFK ND +GH AGD L+ AG I + + R +D R GGEEF Sbjct: 382 QRSKTPLAVLMIDIDHFKDYNDHYGHLAGDVALTAVAGAIETRITRPRDCTARYGGEEFI 441 Query: 483 VILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTI-RISASLGVSSSEETGDYDFEQLQS 541 +LP AA+VAE+IR+++ + ++ A S T I+ S+G++S +E + +L + Sbjct: 442 GLLPETDDLAAAQVAEKIRIQVEKLQVQHAYSATADHITVSIGITSLQEGDKINRMELIN 501 Query: 542 LADRRLYLAKQAGRNRVFAS 561 LAD+ LY AK+AGRN V + Sbjct: 502 LADKALYEAKEAGRNCVKIA 521 >UniRef50_C6NZM9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZM9_9PROT Length = 379 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 4/203 (1%) Query: 365 LWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQ 424 A +T + I + + L+ D LT +YNR L + + A + Sbjct: 157 FTADSSTDFIERLANIFSICLENSLNHERLKLVGLTDPLTGIYNRRYLETRCQEEAAHVR 216 Query: 425 THQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVI 484 ++ P S + +D+D FK IND FGH GD++L I S LR+ DV R GGEEF V+ Sbjct: 217 RYRSPLSCMFLDIDKFKRINDSFGHNIGDKILCSVTAQIKSQLRSNDVLARYGGEEFVVL 276 Query: 485 LPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYD----FEQLQ 540 LP + A ++AERIR + E+ I + ++++ S+GV+ + D D QL Sbjct: 277 LPQTGIRGACDIAERIRRTVAEQAFQIGREDELKVTISIGVAQAPVDADGDERTVAHQLL 336 Query: 541 SLADRRLYLAKQAGRNRVFASDN 563 + AD LYLAK++GRN+V + N Sbjct: 337 AAADEALYLAKESGRNKVVSDHN 359 >UniRef50_C6CQG0 Diguanylate cyclase n=7 Tax=Enterobacteriaceae RepID=C6CQG0_DICZE Length = 491 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 88/323 (27%), Positives = 144/323 (44%), Gaps = 15/323 (4%) Query: 244 VDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFD 303 +D + + GV G+ +PV+ + Q + ++ + L D + S H NI Sbjct: 180 LDYDGQFLGVTGVGLPVQRVTQLI-ETYEQRYNRTIYLIDENGDVMLHSKNFHRALNIHQ 238 Query: 304 PRELALLAQAMEHDTRGGIR----MDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSIS 359 L LA + G + ++ +++ + F L+ + R + ++ Sbjct: 239 QPGLQPLATQILTSPGGNYQYALNNENIFLNTRIIPEFGWKLMVEQNSTPHDRQLWSTLL 298 Query: 360 IALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPL 419 + + MLL+ W I Q L+ A D LT L NR A R L Sbjct: 299 KNTGISITVSVAMLLLIWLTIG-------AYQRRLELMATTDKLTGLMNRQAFEYVFRTL 351 Query: 420 AKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGE 479 T FS+I +DLD+FK IND++GH GDRVL A LI ++R D A R GGE Sbjct: 352 RIKQSTQHRTFSIILIDLDYFKKINDQYGHHVGDRVLVRTARLIQRTIRKTDSACRWGGE 411 Query: 480 EFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQL 539 EF ++L S ++A +AE+IR + ++ + I ++ S G++ S + L Sbjct: 412 EFVLLLADCSRSQAHFIAEKIRRAIR-FALVSHQHQVINLTISCGIAESHPG--ESIDHL 468 Query: 540 QSLADRRLYLAKQAGRNRVFASD 562 AD LY AK+ GR++ ++ Sbjct: 469 VQRADNALYQAKRQGRDQAVIAE 491 >UniRef50_Q2RVQ9 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RVQ9_RHORT Length = 508 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 112/459 (24%), Positives = 191/459 (41%), Gaps = 28/459 (6%) Query: 116 IELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAM 175 I+ + RRT+ + ++ + + E + + L E AL ++ ++ + + Sbjct: 57 IDADVRRTIELYDLALSGIIEAEKF-KTIKDLSPEARHALIFSRVV-----ATHYMGGLL 110 Query: 176 YVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTE 235 ++ AG ++ + ++ R + + +F + + + S+ E Sbjct: 111 RLNAAGDIIA-----DSTSLEPRVGNFADRDYF--QLHKADPDLGLLIGRPIKVRLSDQE 163 Query: 236 PQVTVSVPVD-SNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLT---- 290 ++ ++ V ++ + GV+ M + L +D G L S L Sbjct: 164 WRIPITRRVSTADGRFDGVV-MGAMRVSYFDHLFGKLDIGSQGSITLLKSDGTLLARRGL 222 Query: 291 SSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMD--SRYVSWERLDHFDGVLVRVHTLS 348 D N D + + G D R S+ +++ ++V V + Sbjct: 223 PGELDMVGRNGLDFPNFHRIINGYSKNFSGSSAYDHIRRIYSFAHVENL-PLIVVVALSA 281 Query: 349 EGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYN 408 V G + +I + + + + ++ R + +S+L A D LT L N Sbjct: 282 NEVYGGWIQAAIVVGGITFVLCLGVGAVVVLLLREFRQRRLTESALSELAVTDGLTGLCN 341 Query: 409 RGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL- 467 R L E R +Q P +++ +D+DHFKA NDR GH+ GD VL A +I + L Sbjct: 342 RRHLEEVLRVECARSARNQQPLALLMIDVDHFKAFNDRHGHRIGDGVLVDLAVIIRALLK 401 Query: 468 RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRI-SASLGVS 526 R DV R GGEEF VILP L VAE IR ++ + + +R + S+GV Sbjct: 402 RPADVGARYGGEEFAVILPDTDLAGGLRVAEAIRARMAGRPPV---GQDLRAGTVSIGVV 458 Query: 527 SSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF-ASDNA 564 S T Y + L AD+ LY AK AGRNRV A+D A Sbjct: 459 SRILTPGYGVDDLVMDADKALYAAKGAGRNRVVPAADEA 497 >UniRef50_B4WZN3 GGDEF domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WZN3_9GAMM Length = 395 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 108/215 (50%), Gaps = 2/215 (0%) Query: 350 GVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNR 409 +G IA T+ +++ +++ ++ ++ ++ ++ A D LT L NR Sbjct: 176 AAKGYLSYYWIASTVAFSVPFVAGVLT--LVSLLLRRWVYREAQVRAMAVQDPLTGLSNR 233 Query: 410 GALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRA 469 ALF++ + SV +DLDHFK INDR GH AGD VL A L+ LR Sbjct: 234 RALFDQFAHEMARARRTGEALSVCVMDLDHFKQINDRHGHAAGDTVLVRVANLLRECLRE 293 Query: 470 QDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSE 529 D GR+GGEEF ++LP A +V ER R L +++ + +SAS GV ++ Sbjct: 294 TDRIGRIGGEEFVLVLPDTGHEGAEKVIERCRAALVGTPVMLDVGEPLTVSASFGVVTAL 353 Query: 530 ETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 QL S AD LYLAK+ GRNRV +A Sbjct: 354 AGEQATESQLVSRADDALYLAKKRGRNRVEFWSSA 388 >UniRef50_Q30SV7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SV7_SULDN Length = 659 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 60/181 (33%), Positives = 89/181 (49%), Gaps = 6/181 (3%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 I R +S + + +L+ A D LT +YNR E + + + S+I +D+DH Sbjct: 484 IARDISELKAMNKTLEKMANTDNLTGIYNRRKFEEIIKIEMERSARYNSNLSLIMIDIDH 543 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK IND +GH GD V+ ++S ++R DV R GGEEF V+ P A+ +AE+ Sbjct: 544 FKRINDTYGHDEGDNVIRKTVEIVSKNIRHLDVFVRWGGEEFIVLCPQTESKNASILAEK 603 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 +R+ + +I+ S GV+S + D D LY AK GRNRV Sbjct: 604 LRVAIESVNYETLG----KITCSFGVTSYIKDEDKS--SFIKRLDTALYSAKDEGRNRVV 657 Query: 560 A 560 A Sbjct: 658 A 658 >UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Desulfovibrio vulgaris RepID=A1VA66_DESVV Length = 827 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 71/176 (40%), Positives = 101/176 (57%), Gaps = 2/176 (1%) Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 R ++ L+++L +A D LT + NR F A H +V+ +D+DHFK Sbjct: 632 RDITERKNLEAALLREATTDPLTGVRNRRQFFVDANREFARALRHDSGLAVLMLDIDHFK 691 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 +ND +GHQAGD VL A +LRA DV GR+GGEEF +LP AS EA E AER+R Sbjct: 692 NVNDLYGHQAGDEVLRAFAACCVEALRAYDVFGRLGGEEFAALLPAASPEEAMETAERLR 751 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 ++ E+ ++ + T ++ + S+GV+S D F+ + ADR LY AK GRNR Sbjct: 752 KRV-ERRSVVYEGTALQCTVSVGVTSL-AAADLGFDDMLRRADRALYAAKDHGRNR 805 >UniRef50_B8KPY0 Sensory box/ggdef domain protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPY0_9GAMM Length = 209 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 2/202 (0%) Query: 360 IALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPL 419 L+ L + + +S+ +++ L+ HD LT + NR L ++ + Sbjct: 10 FLLSQTPMLDVSAKFRGSVIFLTDISDRKLMEDELRELTLHDPLTGVANRRLLQDEGQKE 69 Query: 420 AKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGE 479 + Q P S++ VD+D FKA+NDR+GH GD L A L S R D+ R GGE Sbjct: 70 LQRSQRTGAPLSMMAVDIDFFKAVNDRYGHHIGDLALKKVAELCQSVTREYDLVSRTGGE 129 Query: 480 EFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQL 539 EF V+LP SL +A +AER+R + E ++ I+++ S+GV++ + E+L Sbjct: 130 EFTVLLPHTSLEQAHALAERMRCAIAESCAVL-NEHEIKLTVSIGVAAL-LSAHQSIEEL 187 Query: 540 QSLADRRLYLAKQAGRNRVFAS 561 LAD LY AK AGRNRV + Sbjct: 188 SQLADDALYRAKNAGRNRVITA 209 >UniRef50_P54595 Uncharacterized protein yhcK n=2 Tax=Bacillus subtilis group RepID=YHCK_BACSU Length = 359 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 3/200 (1%) Query: 365 LWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQ 424 W + ++S Y+I +N ++L ++QA D LT +YNR E + L + Sbjct: 160 FWIISIAGGMLSLYIIDHE-TNAHLLFKQYKFQAHFDFLTGVYNRRKFEETTKALYQQAA 218 Query: 425 THQH-PFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCV 483 H F++I +D+DHFK IND++GH GD+VL + ++R D A R+GGEEF V Sbjct: 219 DTPHFQFALIYMDIDHFKTINDQYGHHEGDQVLKELGLRLKQTIRNTDPAARIGGEEFAV 278 Query: 484 ILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLA 543 +LP SL +AA +AERIR +++ +++ + ++ SLG + + L LA Sbjct: 279 LLPNCSLDKAARIAERIRSTVSDAPIVLTNGDELSVTISLGAAHYPNNTEQ-PGSLPILA 337 Query: 544 DRRLYLAKQAGRNRVFASDN 563 D+ LY AK+ GRNRV S+ Sbjct: 338 DQMLYKAKETGRNRVCFSEK 357 >UniRef50_Q02P32 Putative two-component response regulator n=6 Tax=Pseudomonas aeruginosa RepID=Q02P32_PSEAB Length = 525 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 68/176 (38%), Positives = 96/176 (54%), Gaps = 1/176 (0%) Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 +S ++ L+ A DTLT L+NR + +A + K + +HP + +D+DHFK Sbjct: 345 YDISRRKAMEQELRLLASTDTLTGLHNRHSFLHQAELMLKAAERFRHPCVALMLDIDHFK 404 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 IND GH GDR L A + LR D+ GR+GGEEF +LP SL +A +VAER+R Sbjct: 405 NINDSHGHLTGDRALQRVAETLRQGLREVDLLGRLGGEEFAALLPEVSLDQALDVAERLR 464 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 + + +R++ S+GV+ + GD D E L AD LY AK GRNR Sbjct: 465 AGVEALRVSNPDGEPLRMTVSIGVALRRDAGD-DLESLLVRADSALYQAKSGGRNR 519 >UniRef50_A1VD57 Diguanylate cyclase n=3 Tax=Desulfovibrio vulgaris RepID=A1VD57_DESVV Length = 487 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 72/214 (33%), Positives = 108/214 (50%), Gaps = 3/214 (1%) Query: 352 RGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQ--SSLQWQAWHDTLTRLYNR 409 + FG+I++AL AL V+R + + ++ QA HD LT+L+NR Sbjct: 265 KNTFGAIAMALAETPALGKDQAQALDSVMRHLTLALRNAVVYREIKLQADHDALTQLHNR 324 Query: 410 GALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRA 469 + + Q + P +++ +D+DHFKA+ND +GH AGD VL A + ++ R Sbjct: 325 RSFDHRLAEEVDRHQRYGMPMTLLMLDIDHFKAVNDTYGHPAGDAVLREVAQTMRNACRT 384 Query: 470 QDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSE 529 D A R GGEEFCVILP AER+R +L + + TI ++ S+G+++ Sbjct: 385 TDFAARYGGEEFCVILPHTDGKCGRIFAERLRKRLASSRVEV-DGKTIAVTVSIGLATLS 443 Query: 530 ETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 E+L AD LY AK AGRN V + Sbjct: 444 AAAPLSPERLVCEADGALYAAKAAGRNIVCEAQE 477 >UniRef50_B7WUF6 Diguanylate cyclase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WUF6_COMTE Length = 373 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 110/206 (53%), Gaps = 9/206 (4%) Query: 362 LTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQ-------AWHDTLTRLYNRGALFE 414 L L F ++ + + R + ++ L+ L+ Q A D LT + NR A E Sbjct: 158 LALTSLAFCAFVVRATRELSRALQSLLRLRRELEIQHSIASNAARTDDLTGVNNRRAFNE 217 Query: 415 KARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAG 474 KA + + + P + D+DHFK IND GH AGD+VL I S+LR D+ G Sbjct: 218 KAETMFAYTRRYGVPLCALLFDIDHFKQINDTHGHAAGDKVLQAVVRQIKSALREADLCG 277 Query: 475 RVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDY 534 R+GGEEF V+L G ++ EA ++AERIRL + + + TT++++ S+GV+ ++ Sbjct: 278 RLGGEEFGVLLAGTNMQEAVQIAERIRLAVQAIKEPV-NDTTLQVTISVGVAEADSAC-A 335 Query: 535 DFEQLQSLADRRLYLAKQAGRNRVFA 560 D L AD +Y AK GRN+V + Sbjct: 336 DVSTLLKQADAAMYRAKSNGRNQVHS 361 >UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67JR0_SYMTH Length = 425 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 69/185 (37%), Positives = 96/185 (51%), Gaps = 2/185 (1%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 + R +S L+S L+ A D LT YNR + E + P S++ +D+DH Sbjct: 223 VFRDISARKRLESDLKHLATTDGLTGAYNRRSFVEVCGQELQRADRRARPTSLLLMDIDH 282 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK +NDRFGH AGD VL LR++DV GR+GG+EF V+LP +L +A VAE+ Sbjct: 283 FKRLNDRFGHAAGDEVLRQIVETGRRVLRSEDVVGRIGGDEFAVLLPATTLEQAGRVAEQ 342 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 +R + A+ T + S GV+ + E+L ADR LY AK AGRN V Sbjct: 343 LRTTYERLAVP-ARGGTATFTVSFGVAEWKPHL-RTVEELLQRADRALYAAKNAGRNCVR 400 Query: 560 ASDNA 564 + Sbjct: 401 TEEAC 405 >UniRef50_Q1JWB7 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWB7_DESAC Length = 513 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 67/181 (37%), Positives = 98/181 (54%), Gaps = 2/181 (1%) Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 M+ + L LQ + D+LTR+ NR E + + + + S++ +D+DHFK Sbjct: 333 HMLDRIESLNKELQLASMTDSLTRVGNRRQFDEHLQHEWLIARRNGTVVSLLMIDIDHFK 392 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERI 500 ND +GHQ GD+ L A +IS+ + R D+ R GGEEF VILP L A +VAERI Sbjct: 393 LYNDTYGHQDGDQCLQSVAEVISNQVKREADLVARYGGEEFAVILPDVPLIGAQKVAERI 452 Query: 501 RLKLNEKEMLIAKS-TTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 R +N+ + + T I+ S+G S D E+L AD+ LY AK+AGRN + Sbjct: 453 RQAINDLGIPNVDALKTPWITVSIGYESMSPQSGQDCEELIRFADQALYRAKKAGRNCII 512 Query: 560 A 560 + Sbjct: 513 S 513 >UniRef50_B8GC13 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Chloroflexus RepID=B8GC13_CHLAD Length = 728 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 75/219 (34%), Positives = 118/219 (53%), Gaps = 5/219 (2%) Query: 346 TLSEGVRGD-FGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLT 404 + V+GD FG + IA L + +++++ I+ +SN+ L+++L+ QA D LT Sbjct: 503 CIPLVVQGDIFGLLYIAGEELPR--SELIVMTGDTIKLALSNL-ALRATLREQAIIDPLT 559 Query: 405 RLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLIS 464 LYNR L Q Q P +V +D+DHFK ND++GH AGD +L A + Sbjct: 560 GLYNRRYLETSLSRELHRAQREQIPLTVAMIDIDHFKQFNDQYGHDAGDTLLRELAVIFR 619 Query: 465 SSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLG 524 LR D+A R GGEEF +ILPG + A + +R + +++++ A + I+ S+G Sbjct: 620 EHLRQSDLACRFGGEEFVLILPGVNQATAQTRLQHLREVVQQRQIIFAGAPLRPITISIG 679 Query: 525 VSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 + E+ + + L AD LY AK++GRNRV N Sbjct: 680 YFTCEKE-EIEPHILLQRADAALYAAKRSGRNRVIDFSN 717 >UniRef50_B6IWW6 Diguanylate cyclase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IWW6_RHOCS Length = 383 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 78/242 (32%), Positives = 116/242 (47%), Gaps = 11/242 (4%) Query: 326 SRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYV---IRR 382 R L+ V+V L+ G G L + A F T L ++ V + R Sbjct: 128 PRARDVPVLNLAPAVVVLTVLLASGAGG------FTLGNVLAHFGTGLFTAYVVALALER 181 Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 + L+ L+ +A D LT L NR L E+A + + P SV+ +DLDHFK Sbjct: 182 AARQSFALELRLEEEARIDPLTGLANRRRLEEQADLEVERARRFGRPLSVLMLDLDHFKR 241 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 +ND GH GD ++S A L +LR D+ R GG+EF +LP +L +A +AER+R Sbjct: 242 VNDEHGHARGDALMSALATLCRRALRQTDLFARAGGDEFVALLPETALDDATTLAERLRT 301 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + + +L + + S+GV++ G + + AD LY AK AGRNRV + Sbjct: 302 LVEAEPLLRG-PVPVGATVSIGVATYVAHG-RSWAAMLQAADDALYRAKAAGRNRVETAP 359 Query: 563 NA 564 A Sbjct: 360 EA 361 >UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2P1_NITSB Length = 486 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 11/207 (5%) Query: 357 SISIALTLLW--ALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFE 414 +I + T+ W L ++L++ + I + + + + A D LT L+NR E Sbjct: 288 NIKMFDTIFWQNILLGSILILFLFTILFYFA---ISRIKFEEMATVDKLTGLFNRHKFQE 344 Query: 415 KARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAG 474 A K H+ P SVI D+DHFK IND +GH GD VL A +I ++R D A Sbjct: 345 IAEIEIKRSHRHKRPLSVILFDIDHFKKINDTYGHDIGDVVLRELAKIIKQNIRKYDYAI 404 Query: 475 RVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDY 534 R GGEEF ++ P +A +AE++R + +++ SLGV+S + + Sbjct: 405 RWGGEEFLILTPETDEKQAFAMAEKLRKAVESHTFPEVG----KVTISLGVASVDP--NE 458 Query: 535 DFEQLQSLADRRLYLAKQAGRNRVFAS 561 +Q AD LY +K GRN+ + Sbjct: 459 SIDQAIKKADNALYGSKLGGRNKTTVA 485 >UniRef50_Q1K456 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K456_DESAC Length = 403 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 70/233 (30%), Positives = 118/233 (50%), Gaps = 16/233 (6%) Query: 344 VHTLSEGVRGDFGSISIALTLLWAL-FTTMLLISWYVIRRMVSNMYVLQ----------- 391 + + ++ G + L+ + + T +I W+ + ++ ++ Sbjct: 165 AYEIKHRIKRSNGRFTWYLSRAFPIRDETGKIIKWFGTATDIDDIKKVEIKLAQAKKAAE 224 Query: 392 ---SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 L+ A D +T L +R A E+A+ L ++ + +Q PFS + +D+DHFK +ND +G Sbjct: 225 EANQKLKELASTDVVTGLQSRRAFMEEAKSLFQIAERYQRPFSFLIIDIDHFKKVNDTYG 284 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H GD VL ++SS LRA D+ GR+GGEEF VILP AE+ ER+ K+ E Sbjct: 285 HLGGDVVLVELGKIMSSCLRATDILGRIGGEEFAVILPETGPDHTAELIERLLEKVRTTE 344 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + I T + ++ S+GV++ ++ + AD+ LY AK GRNR + Sbjct: 345 IRIDDDTLVSVTVSIGVATVPPLP-IHVGKVMAAADKALYQAKSDGRNRCCEA 396 >UniRef50_C6NZP2 Periplasmic/7TM domain sensor diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZP2_9PROT Length = 570 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 4/196 (2%) Query: 366 WALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQT 425 + L L++ + M N L + + A D LT L NR A E A P A Sbjct: 376 FGLVIEATLLALGLSNWMRENRDALYEA-EQVARLDALTHLNNRRAFMELALPYASTAGR 434 Query: 426 HQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVIL 485 H+ P S++ +D+DHFK+IND++GHQ GD VL+ A L+ + R D+ R GGEEF ++L Sbjct: 435 HERPMSLVMMDIDHFKSINDQYGHQTGDLVLTAVADLLKNFSRTSDIVARWGGEEFILLL 494 Query: 486 PGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADR 545 P L +A AER+R + E + + + T+I ++AS G+++ + F+++ AD Sbjct: 495 PETGLKQAINHAERLRQAIAEFRIPVGE-TSISLTASFGIAA--HVANLSFDKMIEQADV 551 Query: 546 RLYLAKQAGRNRVFAS 561 +LY AK++GRN+V S Sbjct: 552 QLYEAKRSGRNKVCCS 567 >UniRef50_A6Q9K1 Signal transduction response regulator n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q9K1_SULNB Length = 409 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 7/209 (3%) Query: 360 IALTLLWALFTTMLLISWY-------VIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGAL 412 + L WY + + + L+ A D LT L+NR Sbjct: 200 WFVMFLVPFIIFYFRELWYSKKALESKVEKRTKELNKTNEKLKKLASTDPLTELFNRRHF 259 Query: 413 FEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDV 472 P +L + + ++I +D+D+FK IND +GH+ GD V+ A ++ R D+ Sbjct: 260 ESLTEPFLELAKRNDTEIAIIVIDIDNFKKINDTYGHKVGDDVIVDLATILKRGSRQSDI 319 Query: 473 AGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETG 532 R GGEEF ++L + +AE+IR K+ + ++ + S GV+ + Sbjct: 320 VCRWGGEEFIILLANTNGKSVLTIAEKIRKKVENLVRTLEDGNELKFTISCGVALVNKES 379 Query: 533 DYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + + ADR LY AK +G+N+V S Sbjct: 380 NTSIHNVIDRADRALYKAKNSGKNKVVES 408 >UniRef50_A8UT68 Putative uncharacterized protein n=2 Tax=Aquificaceae RepID=A8UT68_9AQUI Length = 620 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 70/176 (39%), Positives = 94/176 (53%), Gaps = 1/176 (0%) Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 V L LQ Q++ D LT LYNR L E A L+ + ++ +D+D+FK I Sbjct: 434 VLESKSLMELLQQQSYIDQLTGLYNRRFLDEIADKLSAQVKRRGTSLGILMIDIDYFKQI 493 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND++GH GDRVL A +I SS+R D R GGEE V+L A +VAE+IR Sbjct: 494 NDKYGHDVGDRVLKEIASIIKSSVREADYVIRFGGEEILVLLVDVREGTAKKVAEKIRRA 553 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 + K + I+ I+ + S+GVS + D F Q AD LY AK+ GRNRV Sbjct: 554 IENKVIEISGG-VIKKTVSIGVSEFPKDCDGKFWQCIKFADVALYRAKEEGRNRVV 608 >UniRef50_B1ZA72 Diguanylate cyclase n=16 Tax=Alphaproteobacteria RepID=B1ZA72_METPB Length = 532 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 115/483 (23%), Positives = 187/483 (38%), Gaps = 24/483 (4%) Query: 88 ALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESL 147 AL A + F RDA + EQ IE + R + + +S + L + Sbjct: 46 ALSAVMLFDLRRDAWEKAEQTSKNLLQVIERDIARNVEIIDLSLQGIV-DTLKMPGLADM 104 Query: 148 DNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPW 207 D + ++ R + V G + + VP R + + Sbjct: 105 DPRLR---QLALFDRATTARDM--GVMLVVDENGDTI-----FDAKTVPARRVNNADREY 154 Query: 208 FIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDS-NNYWYGVLGMSIPVRTMQQF 266 F + ++ EP +S +D + + GV+ S+ + Sbjct: 155 F--QLHKARPDHGLQISPPLISRLL-GEPVTVLSRRIDKPDGSFGGVVQASLKLAYFSAL 211 Query: 267 L-RNAIDKNLDGEYQLYD--SKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIR 323 R + ++ L D +R+ D P LA+ T +R Sbjct: 212 FDRIGLGQDGAINLYLRDGTRLMRYPAVEA-DIGANIAGAPTFQRFLAERSGSFTGTSVR 270 Query: 324 MD-SRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRR 382 RY ++ ++ VL V + + ++ S ++ + L + + ++ + R Sbjct: 271 DGIERYYAFTQVGDLPLVL-NVALGTREIEAEWQSKAVGIGLAILVLCGLTILLSLLFGR 329 Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 + +Q+ L A D LT L NR E AK + P +++ +D DHFK Sbjct: 330 ELRRSADMQAELARLAGTDLLTGLPNRRRFEEAFEQAAKASRRADRPLALLVIDADHFKR 389 Query: 443 INDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 NDR GH GD VL A ++ SL R D+A RVGGEEF V+LP AA +AE I Sbjct: 390 YNDRHGHAVGDAVLKSLAKSLTESLRRPNDLAARVGGEEFAVLLPDTDRAGAARIAEAIH 449 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + + A I+ S+G++ S GD E L AD LY+AK++GRNR + Sbjct: 450 AAVAGLAVPAAGIDPGSITVSIGLAVS--AGDRATEDLYRRADAALYVAKESGRNRTCCA 507 Query: 562 DNA 564 A Sbjct: 508 PGA 510 >UniRef50_A4BRN6 Putative signal transduction protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BRN6_9GAMM Length = 504 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 75/183 (40%), Positives = 97/183 (53%), Gaps = 2/183 (1%) Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 R S + LQ A D LT YNR E + HQ P S+ +DLDHFK Sbjct: 322 RKASELERTAVQLQEMARRDPLTGAYNRRYFDEMLSQRFEAATRHQQPLSLGFLDLDHFK 381 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 +NDR+GHQAGD VL+ A ISS LR D R GGEEF ++LP +L A + ERIR Sbjct: 382 MVNDRYGHQAGDVVLAGVAKAISSRLRGDDFLARYGGEEFVLLLPNTNLELAQRILERIR 441 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYD--FEQLQSLADRRLYLAKQAGRNRVF 559 + +E +A IRI+ S G ++ + + L ADR LYLAK+ GRNRV Sbjct: 442 AHIETEEHTVAPEHMIRITLSAGAAAHMDGSRISNKLDDLIRAADRALYLAKRQGRNRVE 501 Query: 560 ASD 562 ++ Sbjct: 502 VAE 504 >UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VQN9_VIBSL Length = 405 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 76/216 (35%), Positives = 112/216 (51%), Gaps = 6/216 (2%) Query: 345 HTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLT 404 TL E DF S L + + +L + +++ L SL + D+LT Sbjct: 174 ITLKEPNIDDFLQASSIHQLAFIITAILLSTIGFTYNWLLNAR--LMQSLYSSSMKDSLT 231 Query: 405 RLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLIS 464 +LYNR A+ E R H HP SVI +D+DHFK +ND+ GHQ GD+VL ++ Sbjct: 232 QLYNRRAMNEMLRREWMRSVRHNHPLSVIILDIDHFKQVNDQHGHQTGDQVLKKIGIILQ 291 Query: 465 SSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLG 524 +LRA D+ R GGEEF ++LP + EA +VAE++R+ + E + +S ++AS G Sbjct: 292 HNLRAADIPFRYGGEEFLIVLPDTRIGEACKVAEKLRIIIEETKFWRQQSA--NLTASFG 349 Query: 525 VSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 +S + + AD LY AK+ GRN V A Sbjct: 350 LSEL--WAEDKVPSMIKRADEALYYAKENGRNTVCA 383 >UniRef50_C9YC42 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YC42_9BURK Length = 409 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 2/197 (1%) Query: 363 TLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKL 422 L+W FTT + + + + + + + + Q L+ D LT L+NR E + K Sbjct: 215 VLMWRKFTT-IAVQKHQLEKAHTELQLKQRELERLTRQDGLTGLFNRNTFVELSTNELKR 273 Query: 423 CQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFC 482 + +++ +DLDHFK IND +GH AGD VL H A + +S+R+ D+ GR+GGEEF Sbjct: 274 AKRQGSATTILLLDLDHFKRINDTWGHPAGDVVLRHVAQTMVNSVRSTDLVGRLGGEEFI 333 Query: 483 VILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSL 542 V+LP + + ++AE+IR +L ++ + I ++AS+G+S + +F+ L + Sbjct: 334 VLLPHTTAEASRKIAEKIRQRLEVSDIR-WEGKRIAVTASIGLSGTTAEESREFDSLYTE 392 Query: 543 ADRRLYLAKQAGRNRVF 559 AD+ LYLAKQ GRNRV Sbjct: 393 ADKALYLAKQRGRNRVI 409 >UniRef50_A6W0K6 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W0K6_MARMS Length = 556 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 86/244 (35%), Positives = 126/244 (51%), Gaps = 13/244 (5%) Query: 318 TRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISW 377 T I+ R V+++ D L+ V +LS ++ S+ LT +L +++ Sbjct: 325 TAKSIQQGDRKVTFQS----DSKLIEVASLSRSLQEMMSSL---LTREQSLMQMNVMLET 377 Query: 378 YVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDL 437 V R + + SL+ A D LT +YNR AL E + Q + PF+VI +D Sbjct: 378 KVKNR-TAELEASNRSLEAIARKDPLTHIYNRLALDEALHKEYRQAQESKCPFAVIMIDA 436 Query: 438 DHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVA 497 DHFK +ND FGH GD VL A L++ + + + R GGEEF V+LP + EA +A Sbjct: 437 DHFKRVNDSFGHTVGDLVLQKIAKLLTVQVGDKGIVARFGGEEFTVLLPNMNADEAKNIA 496 Query: 498 ERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 E IR L ++EM S + ++AS GV+ E D +EQ+ + AD LY AK+ GRNR Sbjct: 497 EMIREALEKEEM----SDGLYVTASFGVAMY-EIDDSHYEQVLNRADAALYKAKEQGRNR 551 Query: 558 VFAS 561 V Sbjct: 552 VVIG 555 >UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WIR5_CHLAA Length = 589 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 1/168 (0%) Query: 392 SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQA 451 + +Q QA D LT L NR + + + + P S+ +D+DHFK IND FGH A Sbjct: 412 AQIQSQAITDNLTGLANRRHFLQVLHQEMERNRRYHTPVSIAMIDVDHFKQINDTFGHIA 471 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GD VL A LR DV R GGEEF +ILP + +A + ER+R L ++I Sbjct: 472 GDYVLREIARRCRQQLRDVDVLARYGGEEFGLILPETTYEQALKATERLRTVLATTPIMI 531 Query: 512 AKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 I + S+GV+S T D L + ADR LYLAKQ GRNRV Sbjct: 532 -DGRQINPTISIGVASFHPTVYPDPSSLIADADRALYLAKQQGRNRVC 578 >UniRef50_Q2BP61 GGDEF/HAMP domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BP61_9GAMM Length = 580 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 2/182 (1%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 ++ V+ + L A D LTR+ NR A +++R + + ++I +D+DH Sbjct: 395 LQLEVNARKKAEEELIKLASTDPLTRVLNRRAFDQRSREEIERSHRYNRELAIILLDIDH 454 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK IND++GHQ GD+VL A LI SLRA D R GGEEF ++LP A +AER Sbjct: 455 FKQINDQYGHQFGDKVLIDVANLIGPSLRAADCLCRHGGEEFIILLPETDEATALLIAER 514 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 +R + + ++ + ++ I+AS GV+ + D + AD+ +Y AK +GRN+V Sbjct: 515 VRKSIAQHKI-TDRHDSLSITASFGVAVWRRE-EGDIQPAVYRADQAMYKAKNSGRNKVV 572 Query: 560 AS 561 A Sbjct: 573 AF 574 >UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6I5_BREBN Length = 530 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 76/184 (41%), Positives = 102/184 (55%), Gaps = 9/184 (4%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 IR ++N+ L A D LT L NR L E + Q PFS++ +DLD Sbjct: 355 IRFALTNIKKKTEQLTHDARTDPLTGLTNRRTLEETMQKWMA----EQIPFSIMMMDLDR 410 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FKAIND +GHQAGD VL H A +ISSSLR +DV+ R GGEEF V++ L EA +VAER Sbjct: 411 FKAINDTYGHQAGDEVLRHFAKIISSSLRPEDVSCRFGGEEFVVLVSHTGLEEAYQVAER 470 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 IR L + I + R++ S G++ E L +AD +Y AK+AGRN+ Sbjct: 471 IRRALETRTNPIGQ----RLTVSQGIAHYPSHA-VSPEGLLHVADEAMYKAKRAGRNQTM 525 Query: 560 ASDN 563 ++ Sbjct: 526 IAEE 529 >UniRef50_Q085X7 Diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q085X7_SHEFN Length = 357 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 108/205 (52%), Gaps = 5/205 (2%) Query: 357 SISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQ--SSLQWQAWHDTLTRLYNRGALFE 414 S + L+ + TT L + Y RM+S L+ Q A D LT L NR Sbjct: 147 STEFKVRLILSFLTTTFLSALYEYSRMLSYNSALKLGKKYQQLALSDPLTTLANRRNALT 206 Query: 415 KARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAG 474 + + P SV+ DLDHFK +ND++GH GD VL+ + + S+R QD Sbjct: 207 ILQQEKSRISRNNEPLSVLLCDLDHFKMVNDKYGHNCGDMVLTELSQVFKQSVRQQDCVA 266 Query: 475 RVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDY 534 R GGEEF ILP S +A+ +AE+IR ++ ++ K I ++ S+G+S T D Sbjct: 267 RWGGEEFLFILPQTSAEQASVIAEKIRTNVHHHKVHFLKH-EISLTISIGISQL--TDDQ 323 Query: 535 DFEQLQSLADRRLYLAKQAGRNRVF 559 + ++L + ADR LY AK+ GRN+V+ Sbjct: 324 NIDELINNADRNLYQAKKNGRNQVY 348 >UniRef50_B6BHU8 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BHU8_9PROT Length = 588 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 62/185 (33%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 377 WYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVD 436 + ++ ++ + L+ + D LT + NR +K + +QHP S+I D Sbjct: 412 YSIVLTDITEQENYKKELEHLSVTDALTGIGNRRYFHQKIEEEIHRAKRYQHPLSLIMFD 471 Query: 437 LDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEV 496 +D FK +ND+ GH GD VL LI+S LR DV R+GGEEF +ILP A EA ++ Sbjct: 472 IDFFKHVNDKHGHSVGDEVLIEYTKLINSLLREGDVFCRIGGEEFIIILPHALRDEAQKI 531 Query: 497 AERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRN 556 AE++R K+ I I+ S GV + +F + D LY AK++GRN Sbjct: 532 AEKLRAKIE------FCQKVIPITMSFGVVEYIVGEEIEF--IFKRVDDALYKAKESGRN 583 Query: 557 RVFAS 561 V Sbjct: 584 IVVVG 588 >UniRef50_Q6AJ00 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ00_DESPS Length = 571 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 3/176 (1%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 + + L A D+LT+L NR F L + P SV+ +D+DHFK Sbjct: 395 DATKRKKAEEKLVRIAATDSLTKLNNRRHFFSLGHEELALHLHNAQPLSVLMLDIDHFKN 454 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 +ND GHQAGD+VL + + + +LR+ D+ GR+GGEEF VIL ++A AERIRL Sbjct: 455 VNDTLGHQAGDKVLKIFSKICAVNLRSVDIIGRIGGEEFAVILTNTPRSQAQRTAERIRL 514 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + +S +I+ S+G+++++ + + + AD+ LY AK GRNR+ Sbjct: 515 AIETSPEFTKQSLP-KITVSIGIATNQPP--ENLDAIICRADKNLYQAKSNGRNRI 567 >UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0DE Length = 329 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 71/180 (39%), Positives = 103/180 (57%), Gaps = 4/180 (2%) Query: 387 MYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDR 446 M L L+ + D LT LYNR E+ + KLC + P + + +D+DHFK IND Sbjct: 151 MEHLNEELKTASRVDGLTGLYNRRYWQERFDEMHKLCVRREKPSTALMLDIDHFKRINDT 210 Query: 447 FGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNE 506 +GHQAGD+V+ A LI +R D+AGR GGEEF +IL +S+ +A VAERIR L + Sbjct: 211 YGHQAGDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILNDSSVEDAKIVAERIRQ-LAQ 269 Query: 507 KEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRN--RVFASDNA 564 + ++ + +I + SLG++ L AD+ LY AK+ GRN R++A+ A Sbjct: 270 RLVVEHEGESISFTVSLGLAQFSPDFKGAMAWL-ECADQALYEAKENGRNQYRIYAAPGA 328 >UniRef50_Q2RUX2 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RUX2_RHORT Length = 632 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 83/304 (27%), Positives = 130/304 (42%), Gaps = 20/304 (6%) Query: 262 TMQQFLRNAIDK----NLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHD 317 M+ F+ A D + G ++ L + + G + A A+ + Sbjct: 336 RMRGFIMAARDAVVIIDQKGIISEFNPSATELFGYDVEEVRGQSVNMLMPATYARDHDGH 395 Query: 318 TRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISW 377 R G R + R G R + I LT+ F + Sbjct: 396 LRKGKPSGQRAIGRGR-------------EMIGRRKNGSEFPIELTVGTQSFDGTRV--H 440 Query: 378 YVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDL 437 + R ++ + +L+ A D LT + NR + E++ L L H S++ VD Sbjct: 441 IGVIRDITERKATEETLRRLANIDGLTGVLNRRSFTEESELLLSLANRHGRRLSMMIVDA 500 Query: 438 DHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVA 497 DHFK +ND +GH AGDRVL G I+ LR D+ GR+GGEEF ++LP A +A Sbjct: 501 DHFKGVNDTYGHDAGDRVLKALTGEIAGVLRKTDLLGRIGGEEFAILLPETDQEGAEGLA 560 Query: 498 ERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 R+ L + E+ + + ++++ S+GVS T F+ + AD LY AK GR+R Sbjct: 561 WRVVLAIRALEVPLPEGGVLKVTVSVGVSC-RNTEAATFDWMLKEADTALYAAKHGGRDR 619 Query: 558 VFAS 561 V Sbjct: 620 VACF 623 >UniRef50_A3WKT4 GGDEF domain protein n=2 Tax=Alteromonadales RepID=A3WKT4_9GAMM Length = 364 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 102/196 (52%), Gaps = 2/196 (1%) Query: 369 FTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQH 428 T + ++ Y+ ++ + + L++ A D LT+L NR + E + + Q Sbjct: 157 LTVVFIMFGYLALYYLNKVNLTHDQLRFYATTDPLTKLRNRRHMSELLKRALQNKHAEQR 216 Query: 429 PFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGA 488 SV+ +DLDHFK++ND GH+ GD+VL A ++ ++R D R GGEEF V LP Sbjct: 217 NVSVLLLDLDHFKSVNDTHGHEVGDKVLRITADILRDTVRDHDKVSRWGGEEFLVFLPRT 276 Query: 489 SLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLY 548 +L AA+VAERIR + + + I+++ S+GVS + D L AD LY Sbjct: 277 NLNHAAQVAERIRKAIAKYPWHTVINENIQLTTSIGVSELKP--DDSVNTLVKRADDALY 334 Query: 549 LAKQAGRNRVFASDNA 564 K+AGRN V A Sbjct: 335 RGKEAGRNWVELESEA 350 >UniRef50_Q0EZJ4 GGDEF/response regulator receiver domain protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZJ4_9PROT Length = 277 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 113/196 (57%), Gaps = 11/196 (5%) Query: 379 VIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLD 438 +I R++SNM QS L +QA HD LT LYNR + E+ ++HP++++ +DLD Sbjct: 82 LIWRIISNMKDAQSELHFQASHDVLTGLYNRRYMMEQLYQGVSQATRYRHPYAIVVMDLD 141 Query: 439 HFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 FK +ND +GH AGD+VLS AG++ S+R D+AGR GGEEF V+LP L A + AE Sbjct: 142 RFKQVNDIYGHAAGDKVLSTMAGILRESVRDADIAGRWGGEEFLVLLPHTDLDGARQAAE 201 Query: 499 RIRLKLNEKEMLIAKSTTIRISASLGVSSSEETG-----------DYDFEQLQSLADRRL 547 + ++ + + +I++S S GV+ + D E L LAD+R+ Sbjct: 202 QWLKRVLATPLGVGGGKSIQVSFSAGVAMFDPVNGRPAVKQALNIDQQVETLLHLADKRM 261 Query: 548 YLAKQAGRNRVFASDN 563 YLAK +GR+ V S + Sbjct: 262 YLAKDSGRSCVVVSGD 277 >UniRef50_D1TF13 Response regulator receiver protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TF13_9BURK Length = 531 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 84/371 (22%), Positives = 151/371 (40%), Gaps = 18/371 (4%) Query: 202 YVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNN-YWYGVLGMSIPV 260 + +F Q+ N + + +P + ++ +D + G+ ++I + Sbjct: 150 LDDREYF--QVQQRNPAAGLYFSHPFMSRLRGAKPSIALTRRIDDAQGNFAGIALLAIRI 207 Query: 261 RTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPD-------HPTGNIFDPRELALLAQA 313 Q L ++ID G + + L D F P Sbjct: 208 EYFQHLL-DSIDTGEQGSVFIGMADGTLLAHKPVDGRDIGGSVAKSPTFLPMTAHDSGSY 266 Query: 314 MEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTML 373 + G+R Y ++V + + V + S L F + Sbjct: 267 VSVSPVDGVRRIFTYAHVPGTP----LIVAIAPAVDDVLAPWQRRSHVAAALTIAFGAVF 322 Query: 374 LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 ++ +++ + + Q++L A D LT L NR L ++ + P SV+ Sbjct: 323 VVVSWLLAFALRDKQRAQAALLRLASTDPLTGLSNRRVLDKRLDDEWMRARRDNRPLSVL 382 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQ-DVAGRVGGEEFCVILPGASLTE 492 +D+DHFK ND +GH++GD VL A I+S R D+ R GGEEF V+LP + Sbjct: 383 FIDIDHFKRFNDTYGHESGDEVLVAVADCIASVARRSVDLVARYGGEEFAVVLPDTTAQG 442 Query: 493 AAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFE--QLQSLADRRLYLA 550 A VAE+IR K+ + ++ ++ S+G +++ + +L + AD +LY+A Sbjct: 443 AFAVAEQIRRKVESRVIVRGHEAPQAVTVSVGCATARPSTADFANGLELLAAADAQLYVA 502 Query: 551 KQAGRNRVFAS 561 K GRNR ++ Sbjct: 503 KNEGRNRTRSA 513 >UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M6_MAGSA Length = 498 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 81/243 (33%), Positives = 118/243 (48%), Gaps = 13/243 (5%) Query: 326 SRYVSWERLDHFDGVLVRVHTLS---EGVRGDFGSISIALTLLWALFTTMLLISWYVIRR 382 R +L++ +L+ + L+ G ++ LL AL T L +R+ Sbjct: 264 ERIFGLSKLENIPLILMVGYDLAGILTEWSKRAGQLAAGFLLLVALATLGLRSYLTTVRQ 323 Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 + L+ QA D LT + NR L A + ++ VD+DHFKA Sbjct: 324 --------REELRRQADTDPLTGVPNRRHLMSVAEHELARTLRYGGALALFMVDIDHFKA 375 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 IND +GH GDRV+ A +++S R QD AGR+GGEEF +LP L AA +AER+R Sbjct: 376 INDTWGHPTGDRVIQVLAAAMAASAREQDTAGRLGGEEFAAVLPETDLEGAAIMAERLRE 435 Query: 503 KLNE-KEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + L + +R + S+GV++ + GD E + ADR LY AK GRNRV + Sbjct: 436 AVEAITSALDDQGQPVRFTVSIGVAAIQL-GDGSVEDILGRADRALYAAKHGGRNRVEMA 494 Query: 562 DNA 564 A Sbjct: 495 ATA 497 >UniRef50_A8UV88 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UV88_9AQUI Length = 475 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 63/163 (38%), Positives = 91/163 (55%), Gaps = 3/163 (1%) Query: 398 AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLS 457 A+ D LT L NR E AR + L + ++ P S++ +D+D+FK+IND +GH GD VL Sbjct: 307 AYTDPLTGLNNRRFFMENARTIIDLSKRYREPLSLLMMDIDNFKSINDNYGHDVGDLVLK 366 Query: 458 HAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTI 517 A +I ++R D+ R GGEEF V+LP A VAERIR + + + I Sbjct: 367 KLAEVIRKNVRTSDIPARFGGEEFVVLLPRTDEKGALMVAERIRNEFRNSSVKV-DGKDI 425 Query: 518 RISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 S S+G+S E + D + L AD LY AK++G++RV Sbjct: 426 WTSVSIGLSVLSE--EDDIDSLIKKADEALYQAKRSGKDRVVI 466 >UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZV8_CHRVO Length = 383 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 68/174 (39%), Positives = 96/174 (55%), Gaps = 2/174 (1%) Query: 391 QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ 450 + L A D LT L NR E A + + H SV+ +DLDHFK IND +GH Sbjct: 209 EKQLYRLATQDGLTELNNRRQFIELADREIERSRRHGSRMSVLMMDLDHFKDINDHYGHA 268 Query: 451 AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEML 510 GD V+ H + + LRA D+ GR+GGEEF +LP L +A +VAER+R L L Sbjct: 269 VGDEVIRHFSQVCREVLRASDLCGRLGGEEFAAVLPDTGLDDARQVAERLR-SLASSARL 327 Query: 511 IAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 A S ++ + S+GV+ + D +++ AD++LY AK+ GRNRV + A Sbjct: 328 SAVSGSLGYTVSIGVAE-RHADETDIDEVLGRADKQLYQAKRDGRNRVSGAAPA 380 >UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRM4_PSYIN Length = 1078 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 7/208 (3%) Query: 351 VRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRG 410 V+ GSI +A + A V+ ++ ++ A D+LT + NR Sbjct: 875 VKRKNGSIFLA-DISSAAIILDGRTIMVGFFHDVTERKKVEEEIKLLATTDSLTGIANRR 933 Query: 411 ALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQ 470 A + + P S++ D+D+FK +ND FGH AGD VL + L+ ++RA Sbjct: 934 AFSTHLASELERSNRYGTPLSLVMFDIDYFKKVNDNFGHDAGDDVLQALSELVKRNIRAV 993 Query: 471 DVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEE 530 D+ R GGEEF +++P + ++ A E++R ++++ ++ S G++ Sbjct: 994 DIVARWGGEEFMLLMPESDISAATAAIEKLRREISDFPF----GQVGSLTVSFGITVFVL 1049 Query: 531 TGDYDFEQLQSLADRRLYLAKQAGRNRV 558 D D LY AK+ GRNRV Sbjct: 1050 NEDSKV--FLKRVDDALYQAKEKGRNRV 1075 >UniRef50_Q21HV6 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q21HV6_SACD2 Length = 301 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 6/207 (2%) Query: 354 DFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALF 413 DF S I +L A + L + + ++ L+ A D LT + NR + F Sbjct: 100 DFVSKPIEYPVLAARMRSALR-----LIQAKRDLEKANKELERLATRDPLTGINNRRSFF 154 Query: 414 EKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVA 473 + A H +++ +D DHFK IND +GH AGD L + ++ R D+ Sbjct: 155 KLAEAELTKTIRHGRDIALLMLDADHFKMINDTYGHAAGDEALLTITEICQNACRESDIL 214 Query: 474 GRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGD 533 R+GGEEF + P +L A VAERIR + E ++ S + I+ S+G+++ + D Sbjct: 215 ARLGGEEFAICCPDTNLEGAYAVAERIRQQC-ENTVIEHNSASFGITLSIGITTFVPSQD 273 Query: 534 YDFEQLQSLADRRLYLAKQAGRNRVFA 560 ++ AD LY AK+ GRNR A Sbjct: 274 KSITEMLQRADNLLYQAKEMGRNRSIA 300 >UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Idiomarina baltica OS145 RepID=A3WMD3_9GAMM Length = 689 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 64/186 (34%), Positives = 97/186 (52%), Gaps = 6/186 (3%) Query: 376 SWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQV 435 S Y I ++ + L+ D LT+++NR + + K C+ H +VI + Sbjct: 507 SAYQIEQLNQELTEANQRLEHLVHTDALTQVWNRYHMEQTLEEEVKRCKRHGRDLAVILL 566 Query: 436 DLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAE 495 D+DHFK +ND +GH GD+VL + I LR+ DV GR GGEEF +I P L A + Sbjct: 567 DIDHFKRVNDDYGHDVGDKVLKLISEAIHQWLRSSDVFGRWGGEEFLIIAPETDLESANQ 626 Query: 496 VAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGR 555 +AER+R +L+ + +++AS GV+ + D + L AD LY K++GR Sbjct: 627 LAERLRRRLSNLQF----DKVGQVTASFGVAELLPSEDRN--SLVKRADNALYQVKESGR 680 Query: 556 NRVFAS 561 N V S Sbjct: 681 NSVEVS 686 >UniRef50_C6BW86 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BW86_DESAD Length = 555 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 59/174 (33%), Positives = 87/174 (50%), Gaps = 4/174 (2%) Query: 392 SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQA 451 LQ A D LT L NR L ++ L + P S++ +D+DHFK IND +GH Sbjct: 370 QELQKSAVTDQLTGLPNRRYLMKEGTRLVDIAIRAGQPCSLMIMDIDHFKVINDTYGHTV 429 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GD VL + +R+ D+ R GGEEF V+ PG+ + +AER+R + E + Sbjct: 430 GDIVLQQISKAFQEVVRSSDIIARYGGEEFVVVAPGSDIDSGRTLAERLRQSV-EARIFN 488 Query: 512 AKSTTIRISASLGVSSSEET---GDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + + S+GVS G +E + + AD LY AK GRNR+ ++ Sbjct: 489 NDEQPLTCTISIGVSHYATDIKFGVDAYEDMLARADNALYKAKDTGRNRICIAE 542 >UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRD6_THISH Length = 464 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 72/176 (40%), Positives = 96/176 (54%), Gaps = 2/176 (1%) Query: 386 NMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAIND 445 + L+ A D LT + NR L E+A + H P S++ +DLDHFK IND Sbjct: 291 QVQEANRKLEQLASTDALTGVANRRQLVERADMEVPRSERHGAPLSLLCLDLDHFKRIND 350 Query: 446 RFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLN 505 +GH AGD VL A I SLR D+ RVGGEEF V+LP L A +VAERIR+KL Sbjct: 351 DYGHLAGDEVLKQVAEAIQQSLRPSDLLARVGGEEFHVLLPDTDLAGARDVAERIRVKLE 410 Query: 506 EKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 ++ + + + ++ S+G + G D + L AD RLY AK GRNRV + Sbjct: 411 GLDIPV-QGVVLHVTVSVGCAQLGPDG-ADMKSLTHTADERLYQAKALGRNRVVIA 464 >UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KAX1_PSEFS Length = 388 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 78/216 (36%), Positives = 120/216 (55%), Gaps = 12/216 (5%) Query: 354 DFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQ-------AWHDTLTRL 406 S+ + + + +F+T ++ + + + + L ++ A D LT L Sbjct: 178 QPSSMQVGVAIAVLVFSTFVVSATRKLSDALEKAFRLTRQMERAHTISTRAAQTDELTGL 237 Query: 407 YNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSS 466 NR A FE A+ L + C+ ++ P + +D+DHFK IND +GHQAGD+VL G+IS+S Sbjct: 238 MNRRAFFEHAQVLYEQCRHNRQPLCALMMDMDHFKQINDTYGHQAGDQVLRQIGGVISAS 297 Query: 467 LRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVS 526 R DV GR+GGEEF V+LP SL A +AE++ ++ +A +SASLGV+ Sbjct: 298 FRQADVYGRLGGEEFAVLLPNTSLDTARTIAEQLVKAISG----LASEPVHGLSASLGVA 353 Query: 527 SSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 S+ T D D L + AD+ LY AK GRN+V ++ Sbjct: 354 ST-HTQDQDLHGLMNTADKALYRAKAQGRNQVAVAE 388 >UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZ84_DESRD Length = 550 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 75/357 (21%), Positives = 137/357 (38%), Gaps = 28/357 (7%) Query: 208 FIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFL 267 F + + + VRW ++ + ++ V I R +Q+ Sbjct: 202 FNEEYRIVHPEKGVRWIHARTYRFESDHKKLFVGT------------AEDITERKVQEEH 249 Query: 268 RNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSR 327 ++++ Y+ + N D + F+ + + +H + R Sbjct: 250 VLKSKQHVEALYRGIPLPIFTWERRNDD-FMLSSFNTAAVEMTQGKAKH-------LKGR 301 Query: 328 YVSWERLDHFDGVLVRVHT---LSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRM- 383 ++S D V+ +H +R ++ + + + + + M Sbjct: 302 WLSEVYRDQNPQVIEDIHRCFESRSNLRRQMSYTLVSTGEEKYIEASYVYVPDRHVMAMV 361 Query: 384 --VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 +++ Q L+ + D LT L+NR + ++ +D+DHFK Sbjct: 362 NDITHQQQYQEHLKRLSRTDELTGLFNRRHFITLMHKEFSRARRTHERLTLAMLDIDHFK 421 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 +ND++GH GD VL H ++ +R D+A R GGEEF + P L++A + ER+R Sbjct: 422 DVNDKYGHDVGDHVLQHLGRILREDVRPYDIAARYGGEEFAICFPDTDLSQADHICERLR 481 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 E+ TI + S G+S D + L AD LY AK GRNR+ Sbjct: 482 TLCAASEV-SRNGGTIGFTVSFGLSELRPE-HEDLDGLLKSADNALYAAKANGRNRI 536 >UniRef50_UPI0001C3940A response regulator receiver modulated diguanylate cyclase n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C3940A Length = 392 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 80/289 (27%), Positives = 124/289 (42%), Gaps = 12/289 (4%) Query: 277 GEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDH 336 G +L + SN GN D L + +A+ + + + Sbjct: 88 GFERLTGYPAHEILGSNCRFLQGNERDQPALDDIRRAIAEAEECRVILKNYRR------- 140 Query: 337 FDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQW 396 DG + VR + G ++ + + + T S + R + LQ Sbjct: 141 -DGTMFWNELFISPVRNEQGELTNFIGIQTDV--TERKKSEEALERSRIALKKTNQELQR 197 Query: 397 QAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVL 456 A +D LT++ NR E C Q P ++I D+D+FK ND FGHQAGD L Sbjct: 198 LALYDDLTQVANRRRFNEYLAYNWHRCSREQEPIALILCDVDYFKPYNDTFGHQAGDDCL 257 Query: 457 SHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKST 515 A IS ++ R+ D+ R GGEEF +ILP + A +VAERIR ++ + S Sbjct: 258 HKIARAISGAIQRSVDLVARYGGEEFAIILPNTPINGAVKVAERIRKQVENLRVPHPGSQ 317 Query: 516 TIR-ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 + ++ SLGV+ + + L + AD LY AK GRN +++ Sbjct: 318 SSDYVTVSLGVACKIPHSELSVDSLIAQADEALYQAKNQGRNCTVIAES 366 >UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1TWE2_ACIAC Length = 377 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 67/184 (36%), Positives = 90/184 (48%), Gaps = 2/184 (1%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 +R + LQ LQ QA D LT LYNR L C P S++ +D+DH Sbjct: 194 LREQFEEIRALQDQLQEQAVRDPLTGLYNRRHLDATLASEIARCGAQGLPLSLMMIDIDH 253 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK IND GH AGD +L A L+ +R +D+A R+GGEEF ++LP L A E AE Sbjct: 254 FKRINDTHGHAAGDAMLQALAQLLQRHVRVRDLACRLGGEEFVLLLPETPLAVARERAEA 313 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 +R ++ + + S GV++ + L + AD LY AK GRNRV Sbjct: 314 LREAFEALQVRH-DPEVLSATLSCGVAAFPQHARQPL-ALTASADEALYAAKMQGRNRVV 371 Query: 560 ASDN 563 D Sbjct: 372 VQDE 375 >UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longbeachae D-4968 RepID=D1RD98_LEGLO Length = 721 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 1/188 (0%) Query: 372 MLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFS 431 +L+ ++ + + L+ +L++Q+ D LT LYNR L + + + P S Sbjct: 510 LLITAFSELTALAFANVRLRENLRYQSMRDPLTGLYNRRYLEDFLLKQIHQSERTKSPIS 569 Query: 432 VIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLT 491 ++ +DLDHFK IND +GH AGD L ++ +R D+A R GGEEF V Sbjct: 570 LLMLDLDHFKKINDTYGHDAGDVALKELGKILQEDIRVGDIAARYGGEEFIVAFYNTDEK 629 Query: 492 EAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAK 551 AE IR ++ ++ I+ S+GV+ G + +L AD+ LY AK Sbjct: 630 TIKTRAESIREAVSRLQVKYGAQPVGPITVSIGVAVYPTDG-RNTNELIESADKALYFAK 688 Query: 552 QAGRNRVF 559 G+NR+ Sbjct: 689 TNGKNRIV 696 >UniRef50_A3Y5H4 Diguanylate cyclase (GGDEF domain) n=1 Tax=Marinomonas sp. MED121 RepID=A3Y5H4_9GAMM Length = 419 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 4/231 (1%) Query: 329 VSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLIS-WYVIRRMVSNM 387 ++ E + F+ ++ + L L T +I Y + + Sbjct: 164 IAGEFIGAFELYYDISDRIAAMKAHMEWVDRMLLLLSSIAIITAFVIGIGYKKVQQIREE 223 Query: 388 YVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRF 447 Y L+ L A D LT +YNR + + K Q S+I D+DHFK +ND + Sbjct: 224 YELE--LIEMATKDKLTNIYNRRSFEARLLQDLKQYDKFQTELSIILFDVDHFKFVNDTY 281 Query: 448 GHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEK 507 GHQAGD VL+ A + ++R+ D+ R GGEEF ++LP + +AE++R + Sbjct: 282 GHQAGDSVLTLLAEIAQQTVRSNDIVARYGGEEFIILLPNTGKNGSQVIAEKLRSAIENA 341 Query: 508 EMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +S I+I+ SLGV+ + + + L AD LY AK GRN+V Sbjct: 342 AF-DTQSYKIQITISLGVACISDVQHPNLDNLIKSADDALYYAKHNGRNQV 391 >UniRef50_D1B7Z4 Sensor protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B7Z4_THEAS Length = 917 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 90/321 (28%), Positives = 146/321 (45%), Gaps = 14/321 (4%) Query: 242 VPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNI 301 VP+ + GV P M+ + + +G +++ ++ + +++ + Sbjct: 605 VPMGVGGRFGGV---EFPQ-GMRLLVADDNPSTREGILRIFSNRGIRVLTASTGEEALEV 660 Query: 302 FDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIA 361 E+ + GG+ + R E+ ++ + V+ + +A Sbjct: 661 LLKGEVDVALVDYMMPHIGGVEVIRRLREEEQCSERYTYVIMIT-----VKDTKEDLVLA 715 Query: 362 LTLLWALFTTMLLISWYVIRRMVSNMYVL--QSSLQWQAWHDTLTRLYNRGALFEKARPL 419 + + + R++S V+ Q L++ A HD LT L NR A+ E Sbjct: 716 MASGADDYVVKPFDPDDLTLRVLSGTRVMEVQRKLRFMARHDQLTGLLNRRAVIEMEERE 775 Query: 420 AKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGE 479 SV +D+D FKAIND +GH AGD+VL A + S LR DV GR GGE Sbjct: 776 MARSVREGGSLSVAMMDIDRFKAINDTYGHLAGDQVLREVARRVGSKLRVYDVVGRYGGE 835 Query: 480 EFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQL 539 EF +ILPGASL +A + ER+R + + +L I ++AS GV+ +QL Sbjct: 836 EFLLILPGASLGDAKRLCERMRSAIGSEPVL-YDGLQIPVTASFGVAEFVPQ--LTVDQL 892 Query: 540 QSLADRRLYLAKQAGRNRVFA 560 +LAD+ LYLAK +GR+ V A Sbjct: 893 NNLADQALYLAKASGRDAVRA 913 >UniRef50_Q5NP17 Diguanylate cyclase with beta propeller sensor n=3 Tax=Zymomonas mobilis RepID=Q5NP17_ZYMMO Length = 1008 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 108/210 (51%), Gaps = 8/210 (3%) Query: 354 DFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSS-----LQWQAWHDTLTRLYN 408 ++ + IAL ++ LF L+ + R++ L+ L+ A D LT L N Sbjct: 800 EYRFVKIALIIILVLFLYDLISNQIRKLRLMITNKTLELQETNLRLKELANTDELTGLLN 859 Query: 409 RGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLR 468 R A E + FSV +D+D FK IND GH AGD V+ + A I+ ++R Sbjct: 860 RRAFTEMFEKNCAQFSKTKDQFSVFILDIDFFKKINDNEGHLAGDAVIQYIAQKITENIR 919 Query: 469 AQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSS 528 QD A R GGEEF ++LP A + +VA RI ++EK + + I ++ S+GV+ Sbjct: 920 QQDFAARYGGEEFVIMLPNADMETTCQVASRIGNAISEKPVP-YQGREIPVTVSIGVAVM 978 Query: 529 EETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +E D + L AD RLY+AK GRNRV Sbjct: 979 KENDDAN--SLLERADERLYMAKNQGRNRV 1006 >UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47W79_COLP3 Length = 334 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 67/178 (37%), Positives = 96/178 (53%), Gaps = 6/178 (3%) Query: 389 VLQSSLQWQA---WHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAIND 445 LQ +L A D LT++YNR + + H S+I +DLDHFK +ND Sbjct: 156 QLQKTLAEIAQISRIDGLTQVYNRRHWQDSLEQEYAKARRHDKKLSLIMLDLDHFKLLND 215 Query: 446 RFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLN 505 +GHQ GD VL + LIS+ LR +D GR GGEEF +ILP A E+A+RI + Sbjct: 216 NYGHQGGDMVLIEVSALISTLLRVEDTFGRYGGEEFAIILPETDSAGAIELAQRICRIIA 275 Query: 506 EKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF-ASD 562 I+++ SLGV+ + + ++E+L + AD LY AK GRN+V A++ Sbjct: 276 TTPF-TYNDQVIKVTVSLGVAQLS-SKESNYEELITQADSALYQAKSQGRNQVCNAAE 331 >UniRef50_A0YTC6 Sensory transduction histidine kinase n=2 Tax=Oscillatoriales RepID=A0YTC6_9CYAN Length = 738 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 81/304 (26%), Positives = 130/304 (42%), Gaps = 17/304 (5%) Query: 258 IPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPD-HPTGNIFDPRELALLAQAMEH 316 + V T+ + L+ + NL G L + + P G P EL + A+ + Sbjct: 443 VEVTTLDEGLQQVENGNLFGYIDLLPTTSYAIQKRYPSLKIAGRFEQPWELGI---AVRN 499 Query: 317 DTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLIS 376 D + + + ++ G++ ++ D+ + L + + +L Sbjct: 500 DQPELLSIFEKAIASIDEKAKQGIINDWISVRYEQGVDYRIVRRFLFIGLTVLAIVLYRQ 559 Query: 377 WYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVD 436 + + L+ + D LT +NR + E + L +Q FSVI D Sbjct: 560 YL--------LQTYNRKLEKISVTDPLTGCFNRLKIEECLQKQESLFNRYQQTFSVILCD 611 Query: 437 LDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEV 496 +D+FK IND FGH AGD VL L++ LR D+ GR GGEEF ++ P L+ A + Sbjct: 612 IDYFKKINDTFGHLAGDAVLMEMVTLLNQRLRDTDILGRWGGEEFMIVAPNTDLSGATTL 671 Query: 497 AERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRN 556 AE + +L + E + +AS GV+ G + L S D LY AK+ GRN Sbjct: 672 AEALCQQLADHEFITVGHQ----TASFGVAEF-HRGSHSISHLISQVDEALYKAKKKGRN 726 Query: 557 RVFA 560 V A Sbjct: 727 CVVA 730 >UniRef50_C4K9W4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thauera sp. MZ1T RepID=C4K9W4_THASP Length = 710 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 83/273 (30%), Positives = 120/273 (43%), Gaps = 26/273 (9%) Query: 289 LTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLS 348 ++S + +D R+ D Y + RL H G V V L+ Sbjct: 440 VSSWESLVHPDDWYDIRDSLEPHLRGTKDA---------YRAEYRLKHKSGHWVWV--LA 488 Query: 349 EGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYN 408 G D G AL ++ I + +S ++ SL A D LT L+N Sbjct: 489 AGRVLDRGEGGEALRMV-------------GIHQDISQRKAMEESLLQLATSDPLTGLWN 535 Query: 409 RGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLR 468 R E R + +Q P +++ +DLD FK IND GH AGD VL H +S+ LR Sbjct: 536 RRHFVEVVRGELGRVRRNQAPAALLLMDLDFFKRINDTHGHAAGDEVLRHFTATVSAQLR 595 Query: 469 AQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSS 528 DV R+GGEEF V+LP A A+R+R + + + + S S+G ++ Sbjct: 596 EADVFARLGGEEFAVLLPSIDALGAVRAADRLRRVVADSPASVDSGA-LHYSVSIG-ATM 653 Query: 529 EETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + D +E + AD LY AK AGRNRV + Sbjct: 654 LDAADEGYEAAYARADEALYAAKHAGRNRVVLA 686 >UniRef50_A1AUD4 Diguanylate cyclase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUD4_PELPD Length = 380 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 76/173 (43%), Positives = 100/173 (57%), Gaps = 1/173 (0%) Query: 393 SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAG 452 S++ A DTLT + NR E A L +LC+ H+HP S VD+DHFK INDR+GH G Sbjct: 205 SIEHTARIDTLTGIANRFHFSEAAPVLLELCRRHEHPISAFMVDIDHFKQINDRYGHPEG 264 Query: 453 DRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA 512 D V+ A + + LR D+ R GGEEF VILP A VAE +R + EK + + Sbjct: 265 DEVIRLVADSMRTKLRNTDLLARYGGEEFVVILPETPPHAAVGVAESVRRTIAEKALALG 324 Query: 513 KSTTIRISASLGVSSSE-ETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 +IRI+ S+GV+ + D E+L AD RLY AK+ GRNRV A+ A Sbjct: 325 AGRSIRITISIGVAGYDLLPDDIGLEELLKQADTRLYEAKEGGRNRVVAALRA 377 >UniRef50_C0QTH1 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QTH1_PERMH Length = 683 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 73/221 (33%), Positives = 113/221 (51%), Gaps = 14/221 (6%) Query: 348 SEGVRGDFGSISIA--------LTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAW 399 S G+ G G I + + +L ++ + M L++ + + L++ A Sbjct: 214 SPGIGGTLGLIVLPEERLSRKDINILNSILSIMTLVTG-----SSRALSKAITELEYFAG 268 Query: 400 HDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHA 459 HD LT LYNR + + + + FS+I +DLD+FK IND +GH GD VL Sbjct: 269 HDPLTDLYNRRIFEDLLKYEVSRAKRKNYKFSLILIDLDNFKYINDTYGHHIGDIVLKSV 328 Query: 460 AGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRI 519 A ++ +S+R D+ R+GG+EF ++L L +A VAERIR L ++ I + I + Sbjct: 329 ADILEASIRDGDLVARIGGDEFVILLSETELEKALIVAERIRKNLENNKLCIFEGAVISV 388 Query: 520 SASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 SASLGV G E+L + D LY AK G+N+V+ Sbjct: 389 SASLGVVEFPTHG-TTKEELMMVVDNALYRAKDLGKNKVYV 428 >UniRef50_A1HS81 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HS81_9FIRM Length = 553 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 60/182 (32%), Positives = 93/182 (51%), Gaps = 6/182 (3%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 V+ ++ L+ + D+LT +YNR +K + + FS++ +D+D FK+ Sbjct: 377 DVTRYKKMEEELRQLSVTDSLTNVYNRRYFVQKLEEEIERAKRAGSKFSLVMLDIDRFKS 436 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 INDRFGH AGD VL A +I + +R D R GGEEF ++LP ++ +A + E +R Sbjct: 437 INDRFGHNAGDLVLKSMAEMIKNRIRKIDTLARWGGEEFVMLLPETTVNKAVVLVEELRE 496 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 L++ ++ R++AS GV + L D +Y AK AGRN V SD Sbjct: 497 SLSQMDIPGVG----RVTASFGVVGYCPG--DTIDTLMQRVDALMYEAKAAGRNCVRYSD 550 Query: 563 NA 564 Sbjct: 551 KC 552 >UniRef50_A1SRL2 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRL2_PSYIN Length = 611 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 103/180 (57%), Gaps = 2/180 (1%) Query: 379 VIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLD 438 ++ + + + A D LT + NR A FE K ++ +++ +DLD Sbjct: 430 LVTERTEELEQAKDRAELLARTDPLTNMLNRRAFFECGSVEIKRSLRYKSSLAIMMIDLD 489 Query: 439 HFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 HFK+IND +GH AGD L A + + +R D+ GR+GGEEF VI+P A L A E+A+ Sbjct: 490 HFKSINDNYGHAAGDNALLSVANTLKAMIRNVDIIGRIGGEEFAVIIPHADLEIATELAQ 549 Query: 499 RIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 R+RL + + E++I + ++I+A GV+S + + ++ AD+ LYLAK+ GRNRV Sbjct: 550 RLRLGIEKVEIII-DNQPVKITACFGVTSIDIKSE-SLDEALKRADKALYLAKENGRNRV 607 >UniRef50_A6VRQ0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VRQ0_MARMS Length = 469 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 66/176 (37%), Positives = 99/176 (56%), Gaps = 1/176 (0%) Query: 386 NMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAIND 445 + Q +LQ +A+ D LT L NRG F++ L L + P +++ +D+DHFK +ND Sbjct: 287 ESFRAQEALQKRAYFDHLTELANRGYFFQQCETLLNLSREKNFPLAILMMDVDHFKKVND 346 Query: 446 RFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLN 505 FGH+ GD VL A + S LR D+ R+GGEEF ++LP EA +AE++R + Sbjct: 347 EFGHKTGDLVLQMLAQMSLSILRRDDLIARIGGEEFAILLPFTEKDEALRIAEQLRESIE 406 Query: 506 EKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 +L + + SLGV+ + GD + + + AD+ LY AK AGRN VF + Sbjct: 407 SSMVLSLDHQEVVFTVSLGVAC-RQDGDCTVDDILNKADKALYQAKAAGRNCVFLA 461 >UniRef50_Q30WV4 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30WV4_DESDG Length = 398 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 90/194 (46%), Gaps = 22/194 (11%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 V+ + L A D LT L NR E AR + Q+ P S++ +D+DHFK Sbjct: 190 DVTAHRRMLEELSHMARTDPLTGLNNRRFFMEAARAEVERMQSSGRPLSLLMLDIDHFKR 249 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 +ND +GH AGD VL + ++ ++R QDV R+GGEEF V+LP EA AE +R Sbjct: 250 VNDTWGHDAGDMVLKQLSCCLAETMRGQDVCARLGGEEFAVLLPETGHAEACRAAETLRQ 309 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGD-------------------YDFEQLQSLA 543 + +++SLG+++ + G E L A Sbjct: 310 AVAGMAFA---GHGFSVTSSLGLTTLDSAGHAVSGQRPVPGGVAVSACCGQVVEILLKRA 366 Query: 544 DRRLYLAKQAGRNR 557 D LY AK+ GRNR Sbjct: 367 DIALYAAKKNGRNR 380 >UniRef50_D2L2K3 Diguanylate cyclase with GAF sensor n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L2K3_9DELT Length = 499 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 1/170 (0%) Query: 392 SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQA 451 S ++ +A HD LTR++NR A E+ + Q + HP S++ +D+DHFK IND +GH Sbjct: 313 SQVKVRADHDGLTRIHNRRAFDERLVEELRRHQRYHHPMSLLMLDIDHFKGINDTYGHLV 372 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GD VL L++ +LR+ D R GGEEF +ILP + ++ +AER+R + + + Sbjct: 373 GDHVLREVGRLMTETLRSTDFTARYGGEEFVIILPQTAEEQSRVLAERLRGLIADARF-V 431 Query: 512 AKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 I+ S+G ++ + L AD+ LY AK GRN+V + Sbjct: 432 HDGHPFSITVSIGAATLLPGALSKRKDLLDKADKALYQAKTLGRNQVCTA 481 >UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HRM0_AZOC5 Length = 514 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 105/421 (24%), Positives = 176/421 (41%), Gaps = 36/421 (8%) Query: 145 ESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVT 204 + L + +A E ++ L S +V + S +P V T Sbjct: 100 QRLLARMISATERSGVMLLTDASGQVVAR-----------SDRPAGPGERVR-------T 141 Query: 205 QPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTM 263 QP+F H++ + + S+ TEP + +S + D + + GV + +P+ + Sbjct: 142 QPYFALHAKGQVDGPYL----SERVACDGTEPCIALSQALKDPDGQFAGVAAVLLPLSLL 197 Query: 264 QQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIR 323 ++ L+ + D F+ P + +A A+ Sbjct: 198 REPLKAEAAETSDPMLVARIDGTLFVEECGTSGICIRP-PPDLIREIAGAVHAPVTLSYG 256 Query: 324 MDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISW---YVI 380 R + V + +R F + + A T+ S V+ Sbjct: 257 DGKRTFYAAPVPQLP----LVVATGQSIRDIFLPWRYRVLVGTAAVLTVGFASIAIALVL 312 Query: 381 RRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHF 440 R + LQ+ L + D LT + NR F+ A + Q P +V+ +D+D F Sbjct: 313 RHDLMRRSRLQAELLQLSLTDDLTGIANRRRFFDVAIREWQRAQRLGSPVAVLMIDIDRF 372 Query: 441 KAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 K +NDR GH AGD VL A LI SL R D+A R GGEEF ILP + A + AER Sbjct: 373 KLLNDRLGHAAGDAVLQAIAQLIRHSLRRPADLAARYGGEEFTAILPDTDMAGAFQTAER 432 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 IR ++ E++++ ++ S+G++++ + + FE + + ADR LY AK++GRNRV Sbjct: 433 IRTQV-ERDVIRGDH---PVTVSIGIAAAIASPNETFENVVAAADRALYRAKESGRNRVM 488 Query: 560 A 560 Sbjct: 489 V 489 >UniRef50_C7LVW7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVW7_DESBD Length = 572 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 96/201 (47%), Gaps = 3/201 (1%) Query: 360 IALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPL 419 ++L + L + + V+ + + L+ A D LT L NR E R Sbjct: 367 VSLVCGFDLLEDGSMFRLHGAMADVTERRLAELRLERLANTDELTGLPNRRHFLECVRAE 426 Query: 420 AKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGE 479 + V VD+D FK +ND GH GD L H A I+ RA DV GR+GGE Sbjct: 427 MTRSRRFGKSLCVAMVDIDDFKKVNDTHGHGVGDLALRHVAQTINGLRRAVDVVGRLGGE 486 Query: 480 EFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQL 539 EFCV+ P A L AER+R L E +L +R++ S+G++ +GD + L Sbjct: 487 EFCVLFPEAGLAAGITAAERVRKALAEA-VLEHGDLRLRLTVSIGLAEY--SGDESLDGL 543 Query: 540 QSLADRRLYLAKQAGRNRVFA 560 +D LY AK+ G+NRV + Sbjct: 544 LRRSDEALYEAKRTGKNRVCS 564 >UniRef50_D1U9G5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9G5_9DELT Length = 840 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 98/195 (50%), Gaps = 7/195 (3%) Query: 374 LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 + S I + ++ + + L A D+LT L++RG E + + + P SV+ Sbjct: 646 VASIIGINQDITEQRLAEQELVRLATKDSLTGLFSRGHFMELGTRAVEHARRYGEPLSVV 705 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEA 493 D D FKA+ND GH GD VL + +LR DV GR+GGEEF +LP + +A Sbjct: 706 MFDADRFKAVNDTHGHDVGDMVLKAIGRAAARTLRDVDVLGRIGGEEFAAVLPQTTREQA 765 Query: 494 AEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYD-------FEQLQSLADRR 546 VAER+R ++ + + T + ++ SLGV + D D ++L AD Sbjct: 766 LLVAERVRAEIAASRIEVDADTVLSVTVSLGVCVMDTAPDTDPGTATASLDKLLKGADTA 825 Query: 547 LYLAKQAGRNRVFAS 561 LY AKQ GRNR ++ Sbjct: 826 LYKAKQNGRNRTESA 840 >UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A6W8_ALHEH Length = 382 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 91/314 (28%), Positives = 131/314 (41%), Gaps = 26/314 (8%) Query: 249 YWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELA 308 +W G +++P ++ L I L G +L N D G I Sbjct: 90 FWCGREQLTLPQARLRLGLLITIPLLLYGAARLL---------LNGDVAPGLILGYSFFP 140 Query: 309 LLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWAL 368 +L AM +R E L + VL+ L V S+ L L Sbjct: 141 VLTVAMLTVFPLTLR--------EALGYLLPVLLVYTLLEIAVGRTLDLQSLGGLWLLVL 192 Query: 369 FTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQH 428 + S V+ ++ L QA D LT L+NR AL E+ Sbjct: 193 VALVAAWS-------VAGQLLMLLRLYRQATRDPLTGLFNRRALTEQIERERARFLRTGR 245 Query: 429 PFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGA 488 P +V+ DLD FK IND GH GDRVL A ++ +LR D GR GGEEF LP Sbjct: 246 PLTVLLFDLDRFKRINDHHGHLVGDRVLQVFANVVQQNLRTTDHFGRWGGEEFLAALPET 305 Query: 489 SLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLY 548 + +A VAER+R + + +A+ ++ + S+GV++ D + L + D LY Sbjct: 306 TSEQARVVAERVRQACENERLTLAEGPSLGFTTSIGVATL--HRDETLDSLFNRVDEALY 363 Query: 549 LAKQAGRNRVFASD 562 AK GRNRV ++ Sbjct: 364 NAKAYGRNRVVEAE 377 >UniRef50_Q47X90 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47X90_COLP3 Length = 364 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 112/212 (52%), Gaps = 7/212 (3%) Query: 353 GDFGSISIALTLLWALFTTMLLISWYVIRRMVS-----NMYVLQSSLQWQAWHDTLTRLY 407 G+ I + + + + T+LL R+ S ++ + L + D LT +Y Sbjct: 154 GEHQHIGLVVLIFIYIPATILLSRAIYNSRLSSVEANDSLEKSVNELHRLSIMDNLTNIY 213 Query: 408 NRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL 467 NR FE ++ L Q P S+I +D+D FK +ND +GHQAGD +L + + Sbjct: 214 NRRYFFEMSKKLIATAFREQKPVSLIMLDIDLFKRVNDNYGHQAGDCILIDLVKELEKVM 273 Query: 468 RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSS 527 R DV R+GGEEF ++L SL A +AE++RL + E ++ I +T+I I+ S+GVS Sbjct: 274 RKSDVFARIGGEEFTILLNNTSLEGAKVIAEKMRLTI-ENKVFIYNTTSIDITISIGVSE 332 Query: 528 SEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 T + E L AD++LY AK GRNRV Sbjct: 333 LN-TENTSIEDLYKQADKQLYRAKHKGRNRVC 363 >UniRef50_Q8DCJ9 FOG: GGDEF domain n=3 Tax=Vibrio RepID=Q8DCJ9_VIBVU Length = 479 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 66/179 (36%), Positives = 100/179 (55%), Gaps = 2/179 (1%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 +S L++ L+ A D LT +NR + E+A + CQ P S++ +D+DHFK Sbjct: 296 DISERKKLEAMLRNLAATDPLTGAFNRRSFMEQAEKSIRTCQRWNCPLSIMILDIDHFKQ 355 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 ND +GH AGD VL + S R D+ GR+GGEEF V+LPG EA EVA+R+R Sbjct: 356 FNDSYGHAAGDLVLVELVKMADLSTREIDIIGRLGGEEFAVVLPGLGEKEAFEVAKRLRS 415 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETG-DYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + ++ + ++++ S+GV++ + + + EQL AD LY AK GRN V + Sbjct: 416 VVENMQV-NYEQQPLQMTISIGVATLQPSELNTPLEQLMKQADEGLYYAKAHGRNCVIS 473 >UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IJX5_PSEHT Length = 621 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 64/183 (34%), Positives = 90/183 (49%), Gaps = 2/183 (1%) Query: 378 YVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDL 437 + ++ + + L+ D LT + NR +K + + Q P SVI +D+ Sbjct: 428 FELQVTLRELEEKNRELEQLNMEDPLTGIKNRRFFDKKLVMELRRSRREQTPLSVIMLDI 487 Query: 438 DHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEV 496 D FK IND +GH GD+V+ AA I L R D R GGEEF V+LP A + Sbjct: 488 DKFKVINDTYGHLTGDQVIRTAADTIKKQLQRPLDEVARYGGEEFVVLLPNTQNDGAIAI 547 Query: 497 AERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRN 556 AE+IR + + +A TTI + S GV +S + E AD+ LY AKQ GRN Sbjct: 548 AEKIRHAIATNNVHVA-GTTISFTISAGVYTSVAEDINNPEIFTERADKALYFAKQHGRN 606 Query: 557 RVF 559 +V Sbjct: 607 QVI 609 >UniRef50_C1SIQ7 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SIQ7_9BACT Length = 312 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 61/184 (33%), Positives = 93/184 (50%), Gaps = 3/184 (1%) Query: 379 VIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLD 438 ++ + ++ A DTLT + NR + A C+ ++ FS+I D+D Sbjct: 132 LLEEKNKELIEAYDKIEHLALTDTLTGIANRRNITNMLGKEAARCKRNKGKFSLIMCDID 191 Query: 439 HFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 FK +ND +GH AGD VL + +I +LR QD+ R GGEEF ++LP A VAE Sbjct: 192 FFKRVNDTYGHDAGDYVLKTISHVIQQALREQDIVARWGGEEFLIVLPETDAGNAVAVAE 251 Query: 499 RIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 ++R + EM + + ++ + GVS + + E+ AD LY KQ GRN+V Sbjct: 252 KLRTAIGNTEM-SYEGISFSVTMTFGVSEYDVS--LGIEKSIKKADDALYEGKQTGRNKV 308 Query: 559 FASD 562 SD Sbjct: 309 VRSD 312 >UniRef50_Q2SPL3 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPL3_HAHCH Length = 373 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 105/210 (50%), Gaps = 9/210 (4%) Query: 360 IALTLLWALFTTMLLISWYVIRRMVS---NMYVLQSSLQW---QAWHDTLTRLYNRGALF 413 + LT L+ + M LI ++ + S + L +L+ A D LT L R L Sbjct: 160 VLLTALFMVMAQMALIGGFISKLRASLRVKNHQLNEALEKISVMASTDELTGLCTRRELM 219 Query: 414 EKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVA 473 ++ C+ S+ +D+DHFK IND +GHQAGD VL A + S +R+ D Sbjct: 220 KQLSNEFSRCRRSSGALSLCLLDIDHFKRINDSYGHQAGDAVLKKVAQTMQSLVRSIDCL 279 Query: 474 GRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGD 533 GR GGEEF +ILP L A AER+R + + + R++ SLG + EE Sbjct: 280 GRYGGEEFLLILPQTPLDGAFITAERLRRAVMDIPFPEV-APEFRVTISLGAAELEEG-- 336 Query: 534 YDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 E L S D+ LY AK AGRNRV +++ Sbjct: 337 EAMETLISRVDKALYAAKGAGRNRVVSAEQ 366 >UniRef50_Q2RNX7 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RNX7_RHORT Length = 492 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 94/192 (48%), Gaps = 2/192 (1%) Query: 370 TTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHP 429 + + ++ ++ +L+ A D LT NR A E AR L Q H P Sbjct: 303 AAGQAVGLVAVITDITEQKRMEEALRRLATTDPLTGALNRRAFMEAARRDLALAQRHGEP 362 Query: 430 FSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGAS 489 +V D+DHFK +ND+ GH GD L + +LRA DV GR+GGEEF +ILP + Sbjct: 363 VTVALADIDHFKRVNDQHGHATGDEALKTFVATVHGALRASDVLGRMGGEEFALILPHTA 422 Query: 490 LTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYL 549 L A +A+R+R L + + + S+G++ G + L AD LY Sbjct: 423 LASAMLLADRLRQTLANLRVPCPSG-EVEFTVSIGLAELGTHG-TTIDTLLQAADEALYR 480 Query: 550 AKQAGRNRVFAS 561 AK AGRNRV A+ Sbjct: 481 AKSAGRNRVIAA 492 >UniRef50_C6CKY4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dickeya zeae Ech1591 RepID=C6CKY4_DICZE Length = 463 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 80/273 (29%), Positives = 129/273 (47%), Gaps = 23/273 (8%) Query: 294 PDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRG 353 P HP I P +L + Q H G S + S R+ +G + +HT + Sbjct: 207 PGHPLREIILPEDLERIVQ---HYHSGNFHHHS-WRSNFRICAENGDVRWIHTEASASHP 262 Query: 354 DFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALF 413 GSI ++L V+ + ++ LQ A D+LT + NR Sbjct: 263 GDGSIVFYGSML-----------------DVTELKQSETLLQVLAQTDSLTGIANRRHFD 305 Query: 414 EKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQD-V 472 E+ + L + ++ Q P S++ +D+D FK ND +GH GD + +++ L + + + Sbjct: 306 ERYQHLWRQQESMQKPLSLLMIDIDRFKRFNDSYGHSKGDACIKSVVETLAAQLPSSECL 365 Query: 473 AGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETG 532 GR GGEEF ++LP +A +AER R + E+ KS ++ S+GV++++ Sbjct: 366 LGRYGGEEFIMVLPETDHRQALILAERCRQAVESMEIPHTKSPQGVVTVSIGVAAAKPGE 425 Query: 533 D-YDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 QL + AD+ LY AK GRNRV AS +A Sbjct: 426 TGSSMTQLSNDADQALYRAKHQGRNRVEASLSA 458 >UniRef50_Q98G89 Mll3440 protein n=1 Tax=Mesorhizobium loti RepID=Q98G89_RHILO Length = 426 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 68/170 (40%), Positives = 95/170 (55%), Gaps = 1/170 (0%) Query: 392 SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQA 451 +L+ Q+ D T LYNR L E + + + P ++I +D+DHFK ND FGH+A Sbjct: 240 ETLRQQSIRDPNTGLYNRRYLEETSSRELRRMERSGQPLAMIMLDVDHFKQFNDTFGHEA 299 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GD VL A + R DV R GGEEF +++PG SL +AAE AE +R + + + Sbjct: 300 GDLVLKQVAATLLDHARESDVVSRYGGEEFALMMPGTSLADAAERAEALRKAIKQLHLTH 359 Query: 512 AKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 T I+AS GVS+ E G + ++ + ADR LY AK GR+RV A Sbjct: 360 RGRTLGTITASFGVSAFPELG-ASWVEIVNAADRSLYQAKADGRDRVVAG 408 >UniRef50_B1KP16 Diguanylate cyclase n=6 Tax=Proteobacteria RepID=B1KP16_SHEWM Length = 485 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 93/395 (23%), Positives = 161/395 (40%), Gaps = 23/395 (5%) Query: 176 YVSRAGFYVSTQPTLFTRNVPTRYYGYVTQP----WFIGHSQRENRHRAVRWFTSQPEHA 231 Y + F+VS + + + T P +F S + A Sbjct: 104 YDTVTSFFVSEKSRKYYHSTGVLKKIEDTAPNDAWYFRVRSL---PTSESYEVNIDLDTA 160 Query: 232 SNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLT 290 + T V V+ V D + GV G+ + V +Q+ ++ + + D++ Sbjct: 161 NRTRTVVYVNYKVHDFEGNFIGVTGVGLAVERVQKLIKL-YQQRYNRRVYFVDTEGHVTL 219 Query: 291 SSNPDHPTGNIFDPRELALLAQAMEHDTRGGIR----MDSRYVSWERLDHFDGVLVRVHT 346 + + + L A + + Y++ + F L+ Sbjct: 220 HGEQYSGSQTLQNSPGLEKYATRILTSPSASFSYVRDNKTVYLNSRMVSDFKWYLMVEQE 279 Query: 347 LSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRL 406 +EG + + + + L + +L+I+ + R Q L+ A D LT Sbjct: 280 EAEGEKKILNTFWVNIVLGLMVIVVILVIANLTLGRY-------QRKLEVMASTDKLTGA 332 Query: 407 YNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSS 466 NR E + + P SVI +D+D+FK++ND FGH GD V+ A +I Sbjct: 333 TNRQMFEEYFSHSLQNAEISATPVSVILLDIDYFKSVNDNFGHSIGDLVIKTVANIIRRQ 392 Query: 467 LRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVS 526 LR++D+ R GGEEF ++LP L+ AA++AERIR + E+++ + I I+ S GV+ Sbjct: 393 LRSEDIVCRWGGEEFLLLLPNIDLSHAADMAERIRESIAERKISV-NEHEIGITVSSGVA 451 Query: 527 SSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + L + D LY AK GR++V S Sbjct: 452 QYKLGEPR--ADLINRVDVALYQAKDRGRDQVVLS 484 >UniRef50_C7LVZ4 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVZ4_DESBD Length = 483 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 65/167 (38%), Positives = 94/167 (56%), Gaps = 1/167 (0%) Query: 395 QWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDR 454 + +A HD LTR+ NR + R K Q HQ S++ +DLD+FK+IND +GHQAGD Sbjct: 309 KARADHDGLTRISNRHHFDIRLREEMKRHQRHQDELSLMMIDLDYFKSINDTYGHQAGDM 368 Query: 455 VLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKS 514 VL +++++LR D R GGEEF VILP +A +AER+R ++ + ++ Sbjct: 369 VLQEVGKILNNTLRESDFPARYGGEEFVVILPQTREDQAWILAERLRSQIGQT-FFRSQK 427 Query: 515 TTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 R++AS+G++ + E L AD LY AK GRN V S Sbjct: 428 KRFRVTASIGIAGIKPCALTPPETLLRNADTALYQAKTNGRNMVCCS 474 >UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z7X2_9GAMM Length = 365 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 88/286 (30%), Positives = 127/286 (44%), Gaps = 19/286 (6%) Query: 286 LRFLTSSNPDHPTGNIFDPRELALLAQAMEHD---TRGGIRMDSRYVSWERLDHFDGVLV 342 L LT TGN+ ++ AL++ +HD T + V D GVL Sbjct: 80 LNPLTIEMGVGVTGNVALTKQSALISNMNDHDNYVTDIEPALSELCVPIMFGDRLYGVLD 139 Query: 343 RVHTLSEGV----RGDFGSISIALTLLWALFTTMLLISWYV------IRRMVSNMYVLQS 392 ++ G + F +I+ + AL L+ Y+ + + Sbjct: 140 SESKIALGYGEEDKKVFETIARMIAAKLALIEQTELVKKYMAELEAKVEERTLELKRANE 199 Query: 393 SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAG 452 L++ A D LT L NR L E + +Q S+I +D+DHFKA+ND GHQ G Sbjct: 200 KLEYLASTDPLTELVNRRRLDEVLEQEFERTSRYQGELSLILLDIDHFKAVNDTRGHQVG 259 Query: 453 DRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA 512 D V++ + R D AGR GGEEF ++ P S A AE++RL + E Sbjct: 260 DEVIAGVGNIAKQMSRKSDTAGRWGGEEFLIVAPQTSCDNAVAFAEKLRLSIENTEF--- 316 Query: 513 KSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 S+ +R+SAS GV+S E + + AD LY AK GRNRV Sbjct: 317 -SSGVRVSASFGVASLETG--ETIQLVLKRADEALYRAKHNGRNRV 359 >UniRef50_B8KV43 Sensory box histidine kinase n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KV43_9GAMM Length = 494 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 2/194 (1%) Query: 370 TTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHP 429 + + + +S+ ++ L+ A D LT NR AL + H P Sbjct: 296 ISGQFAGSIMFLKDISDRKAVERRLKAIADKDPLTGAGNRRALESVIKSELSRAHRHDEP 355 Query: 430 FSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGAS 489 SV +D+D FK++ND +GH GDRVL A L +R D R+GGEEF ++LP S Sbjct: 356 LSVAILDIDWFKSVNDNYGHLMGDRVLIDIAKLCKDLIRPYDTFARIGGEEFALLLPKTS 415 Query: 490 LTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYL 549 + EA +AER+R ++ E ++ ++++ S+GV+ + G E++ ADR LY Sbjct: 416 VPEAERLAERLRQRVAEHTTQAGENR-VQVTISIGVALLAK-GAKTLEEMIESADRALYC 473 Query: 550 AKQAGRNRVFASDN 563 AK GRNRV + Sbjct: 474 AKLDGRNRVVTFEQ 487 >UniRef50_D2C2R9 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech586 RepID=D2C2R9_DICD5 Length = 501 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 92/322 (28%), Positives = 141/322 (43%), Gaps = 15/322 (4%) Query: 245 DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDP 304 D + + GV G+ +PV+ + Q + ++ + L D + S H NI Sbjct: 191 DYSGNFIGVTGVGLPVQRVTQLI-ETYEQRYNRTIYLIDEDGDVMLHSKAFHRASNIHQQ 249 Query: 305 RELALLAQAMEHDTRGGIRM----DSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI 360 L LA + G R ++ +++ + F L+ R + ++ Sbjct: 250 PGLQSLATQVLTSPGGSYRYSLDGENIFLNTRVIPEFGWKLMVEQNSGPHDRQLWITLLK 309 Query: 361 ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA 420 + MLL+ W I Q L+ A D LT L NR A R L Sbjct: 310 NTGISITASIAMLLLIWLTIG-------AYQRRLELMATTDKLTGLMNRQAFEYIFRTLR 362 Query: 421 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 Q FS+I +DLD FK IND++GH GDRVL A LI ++R D A R GGEE Sbjct: 363 MKQSAQQRTFSIILIDLDFFKKINDQYGHHIGDRVLVKTARLIQRAIRKTDSACRWGGEE 422 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 540 F ++L SL +A VAE+IR + ++ + I ++ S GV+ S + L Sbjct: 423 FVLLLGDCSLHQAHRVAEKIRQAV-HFALVSHRHQVINLTISCGVAESNPG--ESIDHLV 479 Query: 541 SLADRRLYLAKQAGRNRVFASD 562 AD+ LY AK+ GR++ ++ Sbjct: 480 QRADKALYQAKRQGRDQAVMAE 501 >UniRef50_A0LAY9 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAY9_MAGSM Length = 220 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 63/179 (35%), Positives = 94/179 (52%), Gaps = 2/179 (1%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 ++ ++ L+ A HD LT + NR E+ + + Q H P +V+ +D+DHFK Sbjct: 37 LIYSLRKALQQLEVMATHDKLTGILNRHGFQERGKYIIDQSQRHSWPLAVVMMDIDHFKK 96 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 IND FGH GD VL + S+R+ D+ R+GGEEF +ILP A ++A+ IR Sbjct: 97 INDSFGHDIGDLVLQSLGSELKKSVRSTDIVARLGGEEFALILPNTDSKHAHQIADSIRK 156 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 K+ + + + + SLGV+S G + L + AD LY AK GRNRV + Sbjct: 157 KIETSRLSLPDGKFLTYTLSLGVTS--GLGIDKMDLLLNQADNALYRAKGTGRNRVVSF 213 >UniRef50_C5T8F5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8F5_ACIDE Length = 1152 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 5/183 (2%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 I + V+ + +L+ A D LT L NR A + +I +DLDH Sbjct: 963 IAKDVTERRRHEQTLERLATTDALTGLANRRAFMARLEEERMRPSMGGRGGMLIMLDLDH 1022 Query: 440 FKAINDRFGHQAGDRVLSHAAGLIS-SSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 FK +ND +GH AGD VL H A L+ LRA D+AGR+GGEEF V+LP + EA VAE Sbjct: 1023 FKRVNDTWGHAAGDEVLVHLARLLRGDLLRATDLAGRLGGEEFAVLLPDTTAEEALGVAE 1082 Query: 499 RIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 R+R L + ++ + T++++ SLGV+ TGD + + AD LY AK GRN+V Sbjct: 1083 RLRRALEQSKIHVGDGATLQVTMSLGVA--PITGDAL--AVLAHADIALYEAKNTGRNKV 1138 Query: 559 FAS 561 + Sbjct: 1139 VLA 1141 >UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2W1_DEIGD Length = 555 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 1/170 (0%) Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 L+++L+ Q+ D LT LYNR L E Q + P S++ +D+DHFK ND +G Sbjct: 374 RLRATLRQQSIRDPLTGLYNRRYLEETFTRELARVQRRRQPLSLLMIDVDHFKQHNDTYG 433 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H GD +L A + R +D+ R GGEEF V+LP +A AE +R + Sbjct: 434 HALGDTLLRRLATHLQRFFRTEDIVCRYGGEEFVVLLPECDAPQAQARAEALRRSVENLA 493 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + + + ++ S+G +S + E L + AD LY AK GRNRV Sbjct: 494 VTSNDAEFVALTISIGGASWPDHA-TTPEDLLARADAALYRAKHRGRNRV 542 >UniRef50_B8FL29 Response regulator receiver modulated diguanylate cyclase n=5 Tax=Bacteria RepID=B8FL29_DESAA Length = 593 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 61/179 (34%), Positives = 91/179 (50%), Gaps = 1/179 (0%) Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 R+ + Q + + D LT L NR E + + + P ++ +DLDHFK Sbjct: 415 RLRKETRLAQEKIVDMSITDELTGLSNRRYFNEVVDIEVQKARNNGSPLTLCMMDLDHFK 474 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 +ND +GH GD+VL+ L+ R+ D+ R GGEEF VILP L A ER R Sbjct: 475 NVNDTYGHLTGDKVLAETGALLKQGFRSHDMIFRYGGEEFAVILPDTDLEHAKRACERFR 534 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + E ++ AK ++I+ S+G+++ + +L AD LY AK+ GRNRV A Sbjct: 535 ESVQEH-VMDAKVKQVKITISIGIANMPGEQIMEAGELIDAADHALYRAKELGRNRVEA 592 >UniRef50_Q7MFB4 GGDEF family protein n=2 Tax=Vibrio vulnificus RepID=Q7MFB4_VIBVY Length = 387 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 78/198 (39%), Positives = 108/198 (54%), Gaps = 11/198 (5%) Query: 362 LTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAK 421 L L+ + T W + R+++N+Y + DTLT +YNR A+ E Sbjct: 196 LALIMLILTLGFTFPWMINARLITNIY-------QTSLRDTLTNIYNRRAMEEMIPRELS 248 Query: 422 LCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEF 481 S+I +DLDHFK IND++GHQ GD+ LS L++S LR QD++ R+GGEEF Sbjct: 249 RASRLGAELSIIILDLDHFKRINDQYGHQVGDQTLSGIGQLLTSQLRKQDISFRIGGEEF 308 Query: 482 CVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQS 541 V+LP + A VAE++R K+ E + T +AS GV+ TGD D++ L Sbjct: 309 LVVLPDTPIESAVLVAEKLRQKIAETRFAPKQRET--WTASFGVAQL-ITGD-DWDALMK 364 Query: 542 LADRRLYLAKQAGRNRVF 559 AD LYLAK GRNRV Sbjct: 365 RADAALYLAKHKGRNRVC 382 >UniRef50_A5IAA0 Sensor histidine kinase n=5 Tax=Legionella pneumophila RepID=A5IAA0_LEGPC Length = 714 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 78/280 (27%), Positives = 135/280 (48%), Gaps = 9/280 (3%) Query: 284 SKLRFLTSSNPDHPTGNIFDPREL-ALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLV 342 + L TS P F P + A+ + H I + +VS+ L+ D L+ Sbjct: 431 NYLEKTTSWGDPQPHELTFTPEQCWAIRRGRVHHVDSSHIELLCGHVSFS-LEQQDLSLL 489 Query: 343 RVHTLSEGVRGDFGSISIALTL----LWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQA 398 V +++ +G + + + L L+ +L+ ++ + + L SL++Q+ Sbjct: 490 CVPLMAQN--DIYGLLYLEVNLKQLPLFDENQRLLITAFAELTALALANVRLGESLRYQS 547 Query: 399 WHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSH 458 D LT LYNR L + + + F+++ +DLDHFK IND FGH+AGD VL Sbjct: 548 IRDPLTGLYNRRYLEDFLFKQLHQAERTKASFAILMLDLDHFKKINDTFGHEAGDFVLKE 607 Query: 459 AAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIR 518 ++++ +R DVA R GGEEF ++L A A+ +R +++ ++ + Sbjct: 608 IGQILNNDIRLGDVATRYGGEEFVLLLFDVDANAAKTRADNLRSAISKLQVKYGAQYVGQ 667 Query: 519 ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 ++AS+G+S + ++L AD+ LY AK GRN V Sbjct: 668 VTASIGISIYPDDA-KSPDELIEAADKALYQAKNKGRNMV 706 >UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geobacter sp. M18 RepID=C6MUF5_9DELT Length = 739 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 81/258 (31%), Positives = 121/258 (46%), Gaps = 14/258 (5%) Query: 309 LLAQAMEHDTRGGIRMDSRYVSWERL---DHFDGVLVRVHTLSEGVRGD-FGSISIALTL 364 LL +E D+R + +R+ S + ++ V LS+ F + + Sbjct: 457 LLINDVEKDSRVAMTNRTRFKSKSLICLPLKLKYKIIGVINLSDKKNLTPFTEADLRVLT 516 Query: 365 LWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQ 424 +A ++ + + + + + D LT LYNR L + Sbjct: 517 SFANLASLTIER--------TEVLEESERFEQLSVTDALTGLYNRRFLKSRLEEELNRSI 568 Query: 425 THQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVI 484 +VI +DLD FK ND GH AGD L A +I +SLR D+ R GGEEFC + Sbjct: 569 RQGLNLTVIFIDLDFFKNFNDLCGHLAGDEALKITADIIKASLREMDIVARYGGEEFCAV 628 Query: 485 LPGASLTEAAEVAERIRLKLNEKEMLIAKS-TTIRISASLGVSSSEETGDYDFEQLQSLA 543 LPG S EA VAERIR ++ +++ K +R++ASLG++S E G F L + Sbjct: 629 LPGTSKAEAMIVAERIRSEIEKEKFPGEKDIPQMRLTASLGIASFPEDG-RTFTTLVHSS 687 Query: 544 DRRLYLAKQAGRNRVFAS 561 D LY AK +GRNR+ A+ Sbjct: 688 DVALYEAKASGRNRIVAA 705 >UniRef50_A1WM32 Diguanylate cyclase n=2 Tax=Burkholderiales RepID=A1WM32_VEREI Length = 612 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 67/182 (36%), Positives = 92/182 (50%), Gaps = 2/182 (1%) Query: 379 VIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLD 438 ++ S + + + A D LT + NR E A Q Q SVI +D+D Sbjct: 427 MVLERTSELARARDEAEHFARIDMLTGVANRRYFEEVATMEFARTQRGQQALSVILIDID 486 Query: 439 HFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 FK +NDR+GH AGD V+ A L S+R D R+GGEEF V+LPG A AE Sbjct: 487 LFKQVNDRYGHAAGDAVIRAVARLAKESVRESDFVARIGGEEFSVLLPGIGQAPAFATAE 546 Query: 499 RIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 R+R ++ ++ ++ +AS GVS + D F L AD+ LY AKQAGRN+V Sbjct: 547 RLRERIAAC-VVEHDGHSLGFTASFGVSE-QVADDPGFSSLLRRADQALYAAKQAGRNQV 604 Query: 559 FA 560 Sbjct: 605 VV 606 >UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N773_9GAMM Length = 462 Score = 244 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 5/202 (2%) Query: 360 IALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPL 419 + ++ A+ + + ++ + + + L+ + D LT ++NR L + + Sbjct: 266 WRMLIVIAVVVALFFYRYLLVNQHNRELQRVNKKLEQLSQRDHLTGIHNRYYLDQAFQQE 325 Query: 420 AKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGE 479 + +QH F+++ +D+D FK IND +GH GD V+ A L+ +R QDV R GGE Sbjct: 326 LTRYKRYQHGFTIVMLDIDLFKQINDSYGHVVGDDVIKQIAMLLREHVRDQDVVARWGGE 385 Query: 480 EFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQL 539 EF ++ P SL A +AE +R + + K I ++ S GV+ D E + Sbjct: 386 EFLILNPETSLDGARTLAEHLRRLIRRTPFTVDK---IDVTVSFGVTDYR--AGEDIETM 440 Query: 540 QSLADRRLYLAKQAGRNRVFAS 561 AD LY AKQ+GR++ Sbjct: 441 IQRADSALYQAKQSGRDKTVVF 462 >UniRef50_C6BZS4 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZS4_DESAD Length = 635 Score = 244 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 3/182 (1%) Query: 379 VIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLD 438 + ++ + ++ A D LT +NR +A + ++ +D+D Sbjct: 451 ITAHDITEQKEMLEEVKRLASTDYLTGAHNRRHFMSRAETELDRLTRYGGELYLMMLDID 510 Query: 439 HFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 HFK IND +GH GD VL +LR DV GR+GGEEF +L S+ A +VAE Sbjct: 511 HFKNINDTYGHSVGDVVLKEMVKCCIETLRTSDVFGRLGGEEFAALLVHGSIDSAIQVAE 570 Query: 499 RIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 R+R + + E+ I + ++++ S+G++ D D E AD+ LY AK+ GRNRV Sbjct: 571 RLREAIEDMEVRIGRH-VVKLTVSIGLTMV--CADEDIEIALKHADKCLYQAKEQGRNRV 627 Query: 559 FA 560 + Sbjct: 628 VS 629 >UniRef50_D1U463 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U463_9DELT Length = 974 Score = 244 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 57/184 (30%), Positives = 100/184 (54%), Gaps = 2/184 (1%) Query: 377 WYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVD 436 Y + ++ L+ ++ A D+LT NR F A + + H +V+ +D Sbjct: 792 LYSVIHDITERVRLEREMKRLATTDSLTGAANRHEFFRLAELELRRAMRYGHSLAVLMLD 851 Query: 437 LDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEV 496 +D+FK+IND GHQ GD VL + L+ ++LR D+ GR+GGEEF +LP L V Sbjct: 852 IDYFKSINDTHGHQTGDAVLKALSALVRTTLRDTDIFGRLGGEEFAAVLPETDLAGGVLV 911 Query: 497 AERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRN 556 A+R+R +L ++ + + + + S+G++ + ++ + + + AD +Y AK+ GRN Sbjct: 912 ADRLRRELGALKVRL-RDIEVMFTVSIGLTETRKS-ERLIDDAINRADEAMYKAKRMGRN 969 Query: 557 RVFA 560 RV + Sbjct: 970 RVES 973 >UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=2 Tax=Desulfovibrio RepID=B8DIR5_DESVM Length = 474 Score = 244 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 82/285 (28%), Positives = 126/285 (44%), Gaps = 21/285 (7%) Query: 283 DSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDS-------RYVSWERLD 335 D +R L + +F+ + L + G +R D R + L+ Sbjct: 203 DMTMRSLIVAAYTIRQQGLFNLKIAGKLPEYENKLRMGVVRHDPLLRTVLNRGIRSLTLE 262 Query: 336 HFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQ 395 ++ R ++ D+ ++ L +L WY + + + L+ Sbjct: 263 ERQQIVNRHVPITAQTSADYWLVARVAGFFALLVGVVL---WYN-----RRLKRMNAVLE 314 Query: 396 WQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRV 455 A D LT L NR L E R + Q ++ PFS++ +D+DHFK +ND GH AGDR Sbjct: 315 RLARTDPLTDLPNRSRLNELFRREVERAQRYRRPFSIVILDIDHFKRVNDELGHLAGDRT 374 Query: 456 LSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKST 515 L AG++ S+R D GR GGEEF V+ P + EA ++AER+R L + + Sbjct: 375 LQVFAGVVRDSVRGTDTVGRWGGEEFLVLCPETTAEEAVQLAERLRGSLRATQF---EGG 431 Query: 516 TIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 I + S GV++ E + L AD LY AK GR+RV Sbjct: 432 RIH-TLSAGVAAFREG--DSVDTLLHRADTALYRAKNGGRDRVEV 473 >UniRef50_Q2IXE2 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Alphaproteobacteria RepID=Q2IXE2_RHOP2 Length = 457 Score = 244 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 93/304 (30%), Positives = 136/304 (44%), Gaps = 21/304 (6%) Query: 276 DGEYQLYDSKLRFLTSSNP-----------DHPTGNIFDPRE--LALLAQAMEHDTRGGI 322 G L D + P +P+ +F E LL ++ + G+ Sbjct: 155 GGRILLVDDRPSSYERLAPLLAAEHDIDVEPNPSEALFHAAEGNYDLLIVSLGLENFDGL 214 Query: 323 RMDSRYVSWERLDHFD-GVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIR 381 R+ S+ S ER H + + +RG I + LL + LL Sbjct: 215 RLCSQARSLERTRHVPILAIADADNNARLLRG--LEIGVNDYLLRPVDKNELLARARTQI 272 Query: 382 RMVSNMYVLQSSLQW---QAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLD 438 R L+ ++Q A D LT L+NR + LA+ + P +++ +D+D Sbjct: 273 RRRRYTDHLRDNVQHSIEMAITDGLTGLHNRRYMESHLATLAEQAGSRGKPLALMILDID 332 Query: 439 HFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 FKAIND +GH AGD VL A I S+R D+A R GGEEF +++P L A VAE Sbjct: 333 FFKAINDTYGHDAGDDVLREFAVRIKKSIRGIDLACRYGGEEFVIVMPETDLQVAQMVAE 392 Query: 499 RIRLKLNEKEMLIAKST-TIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 R+R + + I K T I ++ S+G+S+ E G+ L AD LY AK GRNR Sbjct: 393 RLRRAIAGEPFAIEKGTKRIAVTISIGLSTLERKGEA-VRDLLKRADTALYRAKHDGRNR 451 Query: 558 VFAS 561 V A+ Sbjct: 452 VVAA 455 >UniRef50_D1SRS2 Diguanylate cyclase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SRS2_9BURK Length = 535 Score = 244 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 109/477 (22%), Positives = 190/477 (39%), Gaps = 35/477 (7%) Query: 109 RDEHAWKIELNRRRTLPVNG----VSDALVSEGNLLSRENESLDNEITAALEVGYLLRLA 164 + + L+R ++G V ALVS L R+ L E AL+ + +++ Sbjct: 55 QQAQVFAQNLSRAVAQQMDGLATEVGRALVSIEYELERDE--LSPEQLDALQPVLVNQVS 112 Query: 165 HNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWF 224 + ++ + V + P +P + +F+ H R+N + + Sbjct: 113 LAE-HLHGLFVFGKNGEWLVHSLP------IPPPAANNADREYFVHH--RDNPS-TLTYV 162 Query: 225 TSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYD 283 + + + E + +S + D+ + GV+ ++ VR +QQ L+ D G L Sbjct: 163 SRPLKSRTTGEWVIPLSRRINDAQGGFAGVVLATLRVRHVQQVLQ-GFDVGHKGAIALLR 221 Query: 284 SKLRFLTSSNPDHPT-GNIFDPRELALLAQAMEHDTRGGIRMDS--RYVSWERLDHFDGV 340 + LT G +L Q+ +D R VS+E + Sbjct: 222 ADGTVLTREPFRVEDLGRTLPASQLQQFLQSRSGLAIMPSPIDGVVRLVSFEHARNVPLA 281 Query: 341 LVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIR----------RMVSNMYVL 390 + + E + ++ + + L + Y+IR R+ + L Sbjct: 282 VAVALSEDEIFTEWRRATAVQIAGILLLLAVIGPAGAYLIRTVKLRRDADLRLRTTHEAL 341 Query: 391 ---QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRF 447 + ++ A HD LT ++NR A + R + C+ +Q P SV+ D+D FK ND Sbjct: 342 VEAHARMEHMAEHDGLTGVHNRRAYDRRIREVMAQCRRYQRPVSVVMFDVDFFKRYNDAL 401 Query: 448 GHQAGDRVLSHAAGLISSSLR-AQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNE 506 GH GD L A ++ S+R D R GGEEF ++LP A +VA+ R + Sbjct: 402 GHPEGDECLRRVANALAGSIRRPGDFIARYGGEEFAIVLPETDAPGALQVAQAARSAVIA 461 Query: 507 KEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 + S ++ S GV+ S E+L AD LY AKQ GR+R+ ++ Sbjct: 462 LRLPHPGSPFGHVTVSGGVACSPGQEPETPEELLGRADTALYEAKQQGRDRIVVANG 518 >UniRef50_C6BU46 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BU46_DESAD Length = 490 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 1/173 (0%) Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 ++ + ++ +A D LTR+YNR + E+ K Q S++ VDLD+FKA+ND +G Sbjct: 310 IMFNKIKTRANRDGLTRVYNRRSFDERLVEEFKRHQRLNTELSLLMVDLDYFKAVNDTYG 369 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H AGD VL A + + R+ D R GGEEF ++LP +A +AERIR K+ Sbjct: 370 HMAGDMVLEKVARMFEKTFRSTDFIARYGGEEFVILLPHTREDQAEMLAERIRAKIESCA 429 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 M + + I+AS+GVSS ++ AD LY AK GRNRV S Sbjct: 430 M-TYQDKSFNITASIGVSSVRPGSLEKDTEIVRKADEALYDAKMQGRNRVVVS 481 >UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Roseiflexus RepID=A5V1I0_ROSS1 Length = 681 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 1/171 (0%) Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L + + A D LT ++NR FE R + Q HP +++ +D+DHFK++ND +GH Sbjct: 501 LFAEARRHATIDELTGVWNRRTFFENVRREFQRSQRTLHPLAILMIDVDHFKSVNDTYGH 560 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 AGD+VL A + LR D+ GR GGEEF V LP + A ++AER+R+ + Sbjct: 561 AAGDQVLRGVAERCRNQLRVIDIIGRYGGEEFAVALPETDIHAAGQIAERLRIAVERAPF 620 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + +I ++ S+G + + + ADR LY+AK++GRN V Sbjct: 621 VTDYG-SISLTISVGAAVYHPDDHVTLDAVIDRADRALYIAKRSGRNSVRV 670 >UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VVS2_9CYAN Length = 314 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 63/179 (35%), Positives = 94/179 (52%), Gaps = 2/179 (1%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 + R+V L + L+ A D LT L+NR A ++ S++ +D+DH Sbjct: 135 LNRLVKEHEKLANLLRKLAITDPLTGLWNRRHFLTVAYQEFNRASRYKRFMSILMIDIDH 194 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK IND +GH GD VL A I SLR D GR GGEEF +LP + A VAER Sbjct: 195 FKQINDEYGHTMGDEVLKGVAKSIVGSLREADYCGRFGGEEFVTLLPETDSSGAVRVAER 254 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +R ++ + + I ++++ ++GV+S + D + E + A++ LY AK G NRV Sbjct: 255 LRKRMEQITIGIGD-KQVQMTVTVGVASYQLD-DANIEVIIQRANKALYHAKSQGYNRV 311 >UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU2_ALHEH Length = 686 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 105/210 (50%), Gaps = 6/210 (2%) Query: 352 RGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGA 411 R D G + ++ T + + + ++ + +L+++A HD LT LYNR Sbjct: 480 RADGGETPLQQLIVAHRDETGRVERYSTVAEDITERKRREQALRYRASHDGLTGLYNRRH 539 Query: 412 LFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQD 471 +L HP SV+ DLDHFK +ND GH AGD+VL AGL++ +R D Sbjct: 540 TQRALERELRLAARTGHPVSVVLFDLDHFKRVNDTHGHNAGDQVLRQLAGLVTERVRDTD 599 Query: 472 VAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEET 531 + GR GGEEF ++LPG T A ++AE +R + E I ++ SLG + + Sbjct: 600 IVGRWGGEEFLLVLPGTDETGAGQLAEVLRAYVAEARFPIPD----PVTISLGYA--QAG 653 Query: 532 GDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 D + L D+ LY AK GRNR A+ Sbjct: 654 ADEGADALFKRVDQALYAAKANGRNRAQAA 683 >UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors n=2 Tax=Synechococcus elongatus RepID=Q31K54_SYNE7 Length = 1099 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 61/172 (35%), Positives = 92/172 (53%), Gaps = 1/172 (0%) Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 L+ +L+ + D LT L+NR L E + ++ +D+D+FK ND FG Sbjct: 900 QLRETLRQENLRDPLTGLFNRRYLQEFFEQELARAKRSGDSIGILMLDIDYFKRFNDEFG 959 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H AGD VL A + + +RA DV R GGEE +++PGASL +A A++IR + + Sbjct: 960 HDAGDMVLKQVARALLNQVRASDVVCRFGGEEIAILMPGASLEVSARKADQIRQAIAQLI 1019 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + + T ++ S+GV++ E+G + L AD LY AK AGRN V Sbjct: 1020 ISYHEQTLPSLTISIGVAAFPESGLAS-DTLIKSADTSLYQAKAAGRNCVVV 1070 >UniRef50_Q2BLA2 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLA2_9GAMM Length = 811 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 100/189 (52%), Gaps = 8/189 (4%) Query: 377 WYVIRR------MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPF 430 Y+I R ++ +++L A D LT L NR + + Sbjct: 614 LYLITRTADFVSLLIEEQQTEANLHRLATTDELTSLANRRKFLTTLEAELARAKRYHREL 673 Query: 431 SVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASL 490 S+ +DLDHFK IND GH AGD VL A ++ + LR D+AGR+GGEEF ++LP S Sbjct: 674 SLCMLDLDHFKRINDDNGHSAGDSVLVEVAKIMEAMLRESDMAGRIGGEEFAILLPDTSE 733 Query: 491 TEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDY-DFEQLQSLADRRLYL 549 +A +AER+R + E+ ++ T++++ S+GV+S + + +L S AD +Y Sbjct: 734 DDALILAERLREAIESLEIK-YQAHTLKLTTSIGVASLNQMPEIVQASELLSAADDCMYY 792 Query: 550 AKQAGRNRV 558 AKQ GRN V Sbjct: 793 AKQNGRNLV 801 >UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C2A6_ACAM1 Length = 420 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 88/177 (49%), Gaps = 2/177 (1%) Query: 386 NMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAIND 445 + L A HD LT L NR E + + K Q Q P S++ D+D FK ND Sbjct: 239 KLDEANKQLSLIANHDALTGLANRRRFDEYLQQIWKQTQREQQPLSLLICDIDFFKQYND 298 Query: 446 RFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKL 504 +GH GD L A I ++ R D+ R GGEEF ++LP L VAER+R+ + Sbjct: 299 TYGHLEGDICLRTVAQKIHQTIVRPLDLVARFGGEEFAIVLPNTDLEGGQVVAERLRMII 358 Query: 505 NEKEMLI-AKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + ++ S + ++ S+G ++ L S AD+ LY AKQ+GR++V A Sbjct: 359 QKSQLPHRGSSVSEFVTVSIGAATVRSHPHTSVSSLISRADQALYQAKQSGRDQVVA 415 >UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC96_DESAH Length = 1268 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 74/238 (31%), Positives = 116/238 (48%), Gaps = 7/238 (2%) Query: 323 RMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRR 382 R+ + V + DG+ + TL R ++ ++ L + LF+ +L + + Sbjct: 1036 RIMRKLVDSLTREEVDGIYQKWVTLRFEHRFNYKNMWRYLFITALLFSGILFWNR-KLSA 1094 Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 M + L+ + D LT LYNR + + + +P S+I +D+D FK Sbjct: 1095 FNRQMAEANAKLEQLSVTDRLTGLYNRMKIDDTLLEEIGRVLRYNYPLSLILMDIDLFKQ 1154 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 +ND GHQAGD VL A + ++R+ D+ GR GGEEF VI P L A +AE +R Sbjct: 1155 VNDTHGHQAGDAVLIQMAKTMDKNIRSTDICGRWGGEEFMVICPHTDLKGALSLAEHLRE 1214 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + + I + S GV+ GD + + L + ADR +YLAK+ GRNRV + Sbjct: 1215 SIARQIFP----HVITQTGSFGVAQY-GNGDSEAD-LIARADRAMYLAKEGGRNRVES 1266 >UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii SH145 RepID=D0SXM5_ACILW Length = 440 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 5/240 (2%) Query: 324 MDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRM 383 + +++ + + + S+ + LW + + +RR Sbjct: 171 VQTQFKVAVYCSILIALFIMLGVSQFMSASQAFIFSVVFSPLWFFSIYINWNNILNVRRS 230 Query: 384 VSNMYVLQ---SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHF 440 + + +L+ A D LT+LYNR + A H ++ D+DHF Sbjct: 231 FLRSLLDEWNYQTLKNLAHTDDLTQLYNRRHFVDMAERSIHQWPKHASS-CLLMFDVDHF 289 Query: 441 KAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERI 500 K IND +GH GDRVL A + +R DV R GGEEF +L L ++ +AERI Sbjct: 290 KNINDSYGHDVGDRVLQLIAEVTRKEMRHSDVLARFGGEEFIALLEDTQLQDSLVIAERI 349 Query: 501 RLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 R + ++ + + + TIR + S+GV+ E E L AD LY AK++GRNR+ Sbjct: 350 RCAIQKQYIYVEPNHTIRFTISIGVAELESH-TQPLEDLIKQADIALYQAKKSGRNRIEV 408 >UniRef50_A1TXI5 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXI5_MARAV Length = 523 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 61/173 (35%), Positives = 95/173 (54%), Gaps = 1/173 (0%) Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 L++ LQ ++ D+LT L NR E R ++ P ++ D+DHFK ND G Sbjct: 350 ALRAELQRFSYEDSLTGLKNRRYFDELFRHEREVSARSDRPLCLLIFDIDHFKLFNDCHG 409 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H+AGD+ L ++++ R D R GGEEF V++PGASL EA + AE++R ++ + Sbjct: 410 HEAGDQALRMVGDVLATCFRGSDTVCRYGGEEFSVLMPGASLDEARQRAEQLRAAISAEP 469 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + ++ S G++ E F++L AD+ LY AK+ GRNRV A+ Sbjct: 470 VEHRGENLGSLTISAGIACWRENCPE-FDELFRAADQALYQAKETGRNRVVAA 521 >UniRef50_Q1NY46 GGDEF n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NY46_9DELT Length = 525 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 87/375 (23%), Positives = 150/375 (40%), Gaps = 29/375 (7%) Query: 204 TQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTM 263 + F + R + + + + + + +L R + Sbjct: 164 SASAFRNVFPLLDNGRHLGSVDLSVPFKALRDEL----AALMPGHEFRYILDRDTAERAL 219 Query: 264 QQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIR 323 + L + L + + DS + S P P E+ + + + HD R + Sbjct: 220 RDQLPLYGEAALHPRFLVEDSGVELPDSLPPP--------PAEVVRINRQLRHDRRFQQQ 271 Query: 324 M-DSRYVSWE-RLDHFDGVLVRVHTLSEGVRGDFGSISIA----LTLLWALFTTMLLISW 377 + D +W+ + + + + R IS A L L F LL++W Sbjct: 272 LPDEHSFTWKVMVGNQPWAVNLLRIHDVEQRPVGYLISYAPDNFLVALRKEFIVSLLVAW 331 Query: 378 YVIRRMVSNMYVL---QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQ 434 + + +L + + A D LT L NR + ++ + + +P ++ Sbjct: 332 LLAAGLGLLFVLLARSRDEMVRLATTDPLTGLANRRSFMDRLGLEQERFKRFGNPVGLLM 391 Query: 435 VDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAA 494 +D+D FK +ND GH GD VL A L+ +LR D+ GR+GGEEF V+LPGA L Sbjct: 392 LDIDFFKKVNDTHGHHVGDEVLGQFATLMRQNLRHVDLVGRLGGEEFAVVLPGADLEGTL 451 Query: 495 EVAERIRLKLNEK-------EMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRL 547 A R+R + E+ + + I+ S+GV+ + GD E + AD L Sbjct: 452 HFANRLRCGVGERLQGEVCGHRFSTSAGILNITVSIGVAVLQP-GDDGVEPVLRRADTAL 510 Query: 548 YLAKQAGRNRVFASD 562 Y AK+ GRNR+ + Sbjct: 511 YRAKENGRNRIEVEE 525 >UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XLF8_MEIRU Length = 373 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 8/226 (3%) Query: 339 GVLVRVHTLSEGVRGDFGSISIALTLL-WALFTTMLLISWYVIRRMVSNMYVLQSSLQWQ 397 ++ V L G G S SI ++ + AL T I++ + M + + + + Sbjct: 140 SLVYLVLGLLAGAVGMLMSPSINVSSINTALQFTFSNIAYLALLYMFAYLRRHYAQMHQM 199 Query: 398 AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLS 457 A D LT L NR A+ +K + + PF+++ DLDHFK IND +GH GD+VL Sbjct: 200 AHTDALTNLTNRRAMQQKLEGELDRARRYNRPFALLLADLDHFKQINDTYGHSVGDQVLR 259 Query: 458 HAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTI 517 AG ++ LR D R GGEEF ++ P L +A +A+R+ + E + + + Sbjct: 260 EVAGRLAQHLRESDSLARWGGEEFLILAPETDLQQAYLLAQRLLGAIRESPI-----SGV 314 Query: 518 RISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 +++ SLGV+ + L S AD +Y AK GRN++ + Sbjct: 315 QVTLSLGVACYRQG--DSIAALLSRADEAMYRAKAGGRNQIVLEEE 358 >UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A0S0_DESOH Length = 374 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 83/342 (24%), Positives = 143/342 (41%), Gaps = 42/342 (12%) Query: 239 TVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNL-----------------DGEYQL 281 T+S + + + V+G+ + Q+ +D L GE ++ Sbjct: 48 TLSTSLHVADLFEVVMGLIGEALNVDQYCLMFLDDELQKLQIRASHGIPETVVMHGEIKV 107 Query: 282 YDS-KLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGV 340 R ++ +P + ++ + G+ + ++ +GV Sbjct: 108 TAGVSGRVVSGGHPVLIDDISKESDFFYFPGSGIKQGSYLGVPLKNQ----------EGV 157 Query: 341 LVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWH 400 ++ V + + F + L +A + I+ VSN LQ + + Sbjct: 158 IIGVLNAHKPMVNGFSKNDLRL---FAAVAENVAIA-------VSNAMTLQQT-RELIRK 206 Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D LT LYNR FE+ + + S++ +D+DHFK ND +GH GDRVL + Sbjct: 207 DELTGLYNRRYFFERFEREVYRSRRYGRTISLMMIDIDHFKEYNDSYGHLRGDRVLKTIS 266 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKS--TTIR 518 + SSLR DV R GGEEF V+LP S A VAE++R + + + Sbjct: 267 RIFESSLRKIDVVARYGGEEFLVLLPETSRENAIRVAEKLRQAVEKVDFNEDAPNLGPCA 326 Query: 519 ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 ++ ++GVS+ + + L LAD+ LY+ K GRN+V + Sbjct: 327 LTITIGVSAIPDDANEPILAL-DLADKALYMGKAQGRNQVCS 367 >UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q4KDW8_PSEF5 Length = 315 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 67/172 (38%), Positives = 97/172 (56%), Gaps = 5/172 (2%) Query: 387 MYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDR 446 + LQ + D LT+LYNRG ++ + H +++ +D+DHFK+INDR Sbjct: 144 LQKANQQLQHLSRTDHLTQLYNRGHWEQRLQFEYS---RHGSSIALLMLDIDHFKSINDR 200 Query: 447 FGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNE 506 GHQAGD V+ + LI +R DVAGR GGEEF ++LP L A +AER+R + E Sbjct: 201 HGHQAGDAVIKRVSELIHQHVRDSDVAGRYGGEEFAILLPHTDLAGARTLAERLRQSVEE 260 Query: 507 KEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +E++ I + SLG++ + D L AD+ LY +K+AGRNRV Sbjct: 261 QEVIH-NGQAIAFTISLGIACLDRPA-RDHRCLIEWADQALYASKRAGRNRV 310 >UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479Y1_DECAR Length = 413 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 69/230 (30%), Positives = 116/230 (50%), Gaps = 7/230 (3%) Query: 336 HFDGVLVRVHTLSEGVRGDF-GSISIALTLLWAL-FTTMLLISWYVIRRMVSNMYVLQSS 393 H +L+R S G G F + +IA++ + +++ + I + + L+ Sbjct: 159 HGAFLLIRPWLFSLGKSGLFDAAQAIAVSQFVMVESIAAIVLMAFGIVMLANEQVTLE-- 216 Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 L+ A D LT ++NR + P S++ +DLDHFK IND +GH++GD Sbjct: 217 LRAIAERDPLTGVFNRRSFLTLLDKSISHSDRMASPLSIMLIDLDHFKKINDTWGHKSGD 276 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 L H + +R D+ GRVGGEEF ++LP +++AA VAER+R ++ + + Sbjct: 277 EALRHFVAVAVPCIRNGDIIGRVGGEEFAILLPDTDISKAATVAERLRCEVAARPVKNEH 336 Query: 514 STTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 +I ++ S+GV+ + D E AD +Y AK GRN+V + + Sbjct: 337 G-SITLTVSIGVTHYRK--DEAPEVTLHRADNAMYTAKDKGRNQVEVTPD 383 >UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QU32_CHLT3 Length = 606 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 3/178 (1%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 ++ + +L+ +D LT L NR E+ + + ++ P S+ D+D FK Sbjct: 432 LLERLREQAETLERLVTYDGLTGLANRRHFDEQFEYEFRRTRRYKRPLSIAMSDIDFFKK 491 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 +ND F HQ GD VL A + ++RA D+ R GGEEF I + A AE+IR Sbjct: 492 VNDNFSHQVGDEVLKKVASIFRENVRAGDLVARYGGEEFVFIFTETNKESAIRAAEKIRK 551 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + + + ++++ S+GV+ E+ G ++L + AD +LY AK+ GRN+V A Sbjct: 552 AIEDYDWSNV-HAGLKVTISIGVA--EDAGFDGCDELIAAADSKLYEAKRNGRNQVRA 606 >UniRef50_Q2BLU7 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLU7_9GAMM Length = 477 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 87/334 (26%), Positives = 161/334 (48%), Gaps = 14/334 (4%) Query: 228 PEHASNTEPQVTVSVPVDS-NNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKL 286 P+ A+ + ++ + + + G G+ + + +++ L ++ Sbjct: 150 PDMANKDALTIFINYKIHGPDGEFIGATGLGLNLESIKSILSEYRER-YSNNVYFVTRLG 208 Query: 287 RFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGI---RMDSRYVSWERLDHFDGVLVR 343 L N+ + + Q++ + +G R Y+ R G+++ Sbjct: 209 NVLLHDEQHQVAENLSQEPGMKEIVQSILTEPQGSFSYQRHGKTYLLNTRHIEELGLILC 268 Query: 344 VHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTL 403 V E V F ++ +L + + + LI ++ R++ + Q+ L+ AW D L Sbjct: 269 VEAEEEKV---FDALRPSLIVTAIVCILVTLIVLALLLRVIRHY---QAELEGIAWRDPL 322 Query: 404 TRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLI 463 T L NR A ++ + Q + P S++ VD+DHFK INDR+GH AGD VL + ++ Sbjct: 323 TSLLNRRAFIDRYAAIRNQHQRNGQPLSLLLVDIDHFKEINDRYGHNAGDLVLKGISEIL 382 Query: 464 SSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASL 523 + ++R D+ R GG+EF ++L G A ++AERIR +++ + L A S R++ S+ Sbjct: 383 TEAVRPSDLVTRWGGDEFLLLLSGTDSDNARDIAERIRTRISLEPDLAAISEQ-RLTVSI 441 Query: 524 GVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 GV+ E+ D+D ++ AD LY AK+AGR+R Sbjct: 442 GVA--EQRDDFDLDRHVQEADSGLYRAKKAGRDR 473 >UniRef50_D1C9S7 Serine/threonine protein kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9S7_SPHTD Length = 1765 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 87/358 (24%), Positives = 139/358 (38%), Gaps = 33/358 (9%) Query: 222 RWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQL 281 R + + S + ++ D L ++ + + L + + Sbjct: 1423 RLAQIEAQFESERQQRLLAERLRDLTGTLTATLDLTQVLDRLLTSLAAVVPYDTAAVVLH 1482 Query: 282 YDSKLRFL---TSSNPDHPTGNIF---------------DPRELALLAQAMEHDTRGGIR 323 + +L ++ PD G + P +A RGG+ Sbjct: 1483 HADRLELAMVRGTTRPDEAPGLVIPLANDILLAEVVATGQPLVIADTRDDPRCAHRGGMP 1542 Query: 324 MDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRM 383 ++ + + + V L+ + G FG + +A + + Sbjct: 1543 DLRAWLGVPLIS--ESRVAGVVVLTSQISGAFGEREAGIAFTFAGQAGVAI--------- 1591 Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 L + +Q A D LT YNR L A Q P + I +D+D FK + Sbjct: 1592 --ENARLFAEVQRLAVTDDLTGTYNRRHLLTTAERELSRAQRFNRPLAAIILDIDEFKRV 1649 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND GH GD VL A + S LR DV GR GGEEF +ILP L A ++AER+R Sbjct: 1650 NDAHGHAVGDEVLRAVADRLRSGLREVDVLGRYGGEEFVIILPETDLISAYQIAERLRNS 1709 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + + + + + ++ SLGV++++ T DF L S D LY AK+ GRNRV Sbjct: 1710 IAAEPIATSTG-PVSVTISLGVAAADPT-TPDFASLLSRIDDLLYTAKRRGRNRVVVG 1765 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q3Z0N3 Cellulose synthesis regulatory protein n=28 Tax=... 647 0.0 UniRef50_Q5PLI4 Cellulose synthesis regulatory protein n=77 Tax=... 590 e-167 UniRef50_C8QGL2 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b Re... 516 e-144 UniRef50_C9XVB6 Cellulose synthesis regulatory protein n=9 Tax=E... 482 e-134 UniRef50_Q1LHF7 Diguanylate cyclase (GGDEF domain) n=2 Tax=cellu... 474 e-132 UniRef50_Q46VS6 GGDEF n=1 Tax=Ralstonia eutropha JMP134 RepID=Q4... 468 e-130 UniRef50_Q1LM75 Diguanylate cyclase (GGDEF domain) n=2 Tax=Cupri... 415 e-114 UniRef50_D1TJS9 Response regulator receiver protein n=1 Tax=Burk... 401 e-110 UniRef50_D0J6R3 Diguanylate cyclase n=23 Tax=Burkholderiales Rep... 367 e-100 UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 358 2e-97 UniRef50_B2SWP1 Diguanylate cyclase n=5 Tax=Burkholderia RepID=B... 358 2e-97 UniRef50_Q3JJL8 GGDEF domain protein n=52 Tax=Burkholderia RepID... 343 9e-93 UniRef50_Q2T680 GGDEF domain protein n=32 Tax=Burkholderia RepID... 341 6e-92 UniRef50_Q2RVQ9 Putative diguanylate cyclase (GGDEF domain) n=1 ... 338 2e-91 UniRef50_A9AKV8 Diguanylate cyclase n=24 Tax=Burkholderia RepID=... 337 6e-91 UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms ... 337 8e-91 UniRef50_D1SRS2 Diguanylate cyclase n=1 Tax=Acidovorax avenae su... 335 2e-90 UniRef50_B1ZA72 Diguanylate cyclase n=16 Tax=Alphaproteobacteria... 333 1e-89 UniRef50_B1G121 Diguanylate cyclase n=4 Tax=Burkholderia RepID=B... 331 4e-89 UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 330 1e-88 UniRef50_Q2P5U8 Response regulator n=12 Tax=Xanthomonas RepID=Q2... 327 6e-88 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 327 8e-88 UniRef50_A4JS57 Diguanylate cyclase n=3 Tax=Burkholderia vietnam... 325 2e-87 UniRef50_B2UHP5 Diguanylate cyclase n=10 Tax=Ralstonia RepID=B2U... 320 9e-86 UniRef50_Q4KF29 GGDEF domain protein n=2 Tax=Pseudomonas fluores... 320 1e-85 UniRef50_D1TF13 Response regulator receiver protein n=1 Tax=Burk... 320 1e-85 UniRef50_Q48MB2 GGDEF domain protein n=14 Tax=Pseudomonas RepID=... 318 3e-85 UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0... 317 7e-85 UniRef50_C0QM24 Putative uncharacterized protein n=1 Tax=Desulfo... 315 2e-84 UniRef50_A4G5V3 Putative uncharacterized protein n=1 Tax=Hermini... 313 1e-83 UniRef50_Q0EXC8 Signal transduction protein containing a membran... 310 9e-83 UniRef50_A4VQQ9 GGDEF domain protein n=1 Tax=Pseudomonas stutzer... 309 2e-82 UniRef50_Q4K7I5 GGDEF domain protein n=1 Tax=Pseudomonas fluores... 308 3e-82 UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya... 308 4e-82 UniRef50_B5SA27 Signal transduction protein ggdef domain n=4 Tax... 306 1e-81 UniRef50_D2M3Q6 Diguanylate cyclase n=1 Tax=Rhodopseudomonas pal... 306 1e-81 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 304 7e-81 UniRef50_B1KP16 Diguanylate cyclase n=6 Tax=Proteobacteria RepID... 301 3e-80 UniRef50_Q04NQ1 GGDEF family protein n=7 Tax=Leptospira RepID=Q0... 300 9e-80 UniRef50_A8IEV2 GGDEF n=1 Tax=Azorhizobium caulinodans ORS 571 R... 298 4e-79 UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 297 8e-79 UniRef50_C7C7Z0 Putative diguanylate cyclase (GGDEF motif) n=1 T... 296 1e-78 UniRef50_B6JAZ4 Diguanylate cyclase n=1 Tax=Oligotropha carboxid... 296 2e-78 UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0... 295 3e-78 UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 294 6e-78 UniRef50_C6CQG0 Diguanylate cyclase n=7 Tax=Enterobacteriaceae R... 293 1e-77 UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 293 1e-77 UniRef50_A8IBW0 GGDEF domain protein n=1 Tax=Azorhizobium caulin... 293 1e-77 UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobiu... 293 1e-77 UniRef50_D2C2R9 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech... 292 2e-77 UniRef50_Q0K115 Diguanylate cyclase/phosphodiesterase domain 1 (... 292 3e-77 UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobac... 291 5e-77 UniRef50_A9C0P7 Diguanylate cyclase n=4 Tax=Proteobacteria RepID... 291 7e-77 UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 288 4e-76 UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors... 288 4e-76 UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 68... 287 8e-76 UniRef50_Q1K453 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 286 2e-75 UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 285 3e-75 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 285 4e-75 UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 285 4e-75 UniRef50_Q2T675 GGDEF domain protein n=24 Tax=Burkholderiaceae R... 282 2e-74 UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 281 5e-74 UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 281 5e-74 UniRef50_C6P6Y5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 281 7e-74 UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4S... 280 9e-74 UniRef50_A4GA83 Putative uncharacterized protein n=1 Tax=Hermini... 280 1e-73 UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 68... 279 2e-73 UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 277 7e-73 UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7Q... 277 9e-73 UniRef50_UPI0001C3940A response regulator receiver modulated dig... 276 2e-72 UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF dom... 276 2e-72 UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein... 276 2e-72 UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnet... 275 2e-72 UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 274 5e-72 UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 274 5e-72 UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepI... 274 6e-72 UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 274 6e-72 UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 273 9e-72 UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum al... 273 1e-71 UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GC... 273 1e-71 UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 273 2e-71 UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromato... 272 2e-71 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 272 3e-71 UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 271 4e-71 UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 271 5e-71 UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 271 5e-71 UniRef50_Q2BLU7 Putative uncharacterized protein n=1 Tax=Neptuni... 271 6e-71 UniRef50_Q1H013 Diguanylate cyclase (GGDEF domain) n=2 Tax=Methy... 271 7e-71 UniRef50_B7K273 Response regulator receiver modulated diguanylat... 270 9e-71 UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 270 9e-71 UniRef50_A4XX59 Diguanylate cyclase n=1 Tax=Pseudomonas mendocin... 269 2e-70 UniRef50_A3Y6S3 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121... 269 2e-70 UniRef50_A4XS06 Diguanylate cyclase n=7 Tax=Pseudomonas RepID=A4... 268 3e-70 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 268 3e-70 UniRef50_Q7NQA3 Probable GGDEF family protein n=1 Tax=Chromobact... 268 3e-70 UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=P... 268 4e-70 UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 268 4e-70 UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 268 4e-70 UniRef50_C0QLY1 Two domain sensory box histidine kinase (PAS/PAC... 268 5e-70 UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacte... 267 7e-70 UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 267 9e-70 UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with... 267 9e-70 UniRef50_C4XKN6 Putative signaling protein n=2 Tax=Desulfovibrio... 267 1e-69 UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 267 1e-69 UniRef50_Q2L341 Putative signaling protein n=3 Tax=Bordetella Re... 266 1e-69 UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 266 1e-69 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 266 1e-69 UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 266 2e-69 UniRef50_Q31M78 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 266 2e-69 UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 266 2e-69 UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium... 266 2e-69 UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 266 2e-69 UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=... 265 3e-69 UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 265 3e-69 UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor d... 265 3e-69 UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain prote... 265 3e-69 UniRef50_Q489Q4 Sensory box/GGDEF domain protein n=1 Tax=Colwell... 265 4e-69 UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnet... 265 4e-69 UniRef50_C6CKY4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 264 5e-69 UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID... 264 7e-69 UniRef50_B9JR22 Two component response regulator n=1 Tax=Agrobac... 264 9e-69 UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thioox... 263 1e-68 UniRef50_B8FCK6 Response regulator receiver modulated diguanylat... 263 1e-68 UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID... 263 1e-68 UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 263 1e-68 UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodi... 263 2e-68 UniRef50_A5IAA0 Sensor histidine kinase n=5 Tax=Legionella pneum... 263 2e-68 UniRef50_Q0VL34 GAF/PAS/GGDEF domain protein n=2 Tax=Alcanivorax... 263 2e-68 UniRef50_C1D915 GGDEF domain protein n=1 Tax=Laribacter hongkong... 263 2e-68 UniRef50_C7I354 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 263 2e-68 UniRef50_Q21HV6 Response regulator receiver modulated diguanylat... 263 2e-68 UniRef50_Q47FN5 Response regulator receiver modulated diguanylat... 262 2e-68 UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 262 2e-68 UniRef50_Q1JWQ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 262 2e-68 UniRef50_Q486E7 Sensory box/GGDEF domain protein n=2 Tax=Proteob... 262 3e-68 UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus... 262 3e-68 UniRef50_Q2BQL8 Probable two-component response regulator n=1 Ta... 262 3e-68 UniRef50_A5EDY2 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=... 262 3e-68 UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidima... 261 4e-68 UniRef50_B3E243 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 261 4e-68 UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 261 5e-68 UniRef50_C7HYK2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 261 6e-68 UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswal... 261 6e-68 UniRef50_Q4USH9 Sensor histidine kinase n=3 Tax=Xanthomonas camp... 261 6e-68 UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Breviba... 261 6e-68 UniRef50_Q1AX52 Diguanylate cyclase n=1 Tax=Rubrobacter xylanoph... 261 6e-68 UniRef50_Q1NY46 GGDEF n=2 Tax=delta proteobacterium MLMS-1 RepID... 261 6e-68 UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitrati... 261 6e-68 UniRef50_Q2W220 Response regulator containing a CheY-like receiv... 261 7e-68 UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 261 7e-68 UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clos... 260 8e-68 UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 T... 260 9e-68 UniRef50_Q1JWB7 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 260 9e-68 UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms R... 260 1e-67 UniRef50_Q2W1M0 Response regulator containing a CheY-like receiv... 260 1e-67 UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydroge... 260 1e-67 UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longb... 259 1e-67 UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 259 1e-67 UniRef50_Q30SV7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 259 2e-67 UniRef50_B6BHU8 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 259 2e-67 UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors... 259 2e-67 UniRef50_Q216C5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Rhodo... 259 2e-67 UniRef50_Q2BLA2 Putative uncharacterized protein n=1 Tax=Neptuni... 259 2e-67 UniRef50_B8DNJ7 Diguanylate cyclase n=1 Tax=Desulfovibrio vulgar... 259 2e-67 UniRef50_A0YTC6 Sensory transduction histidine kinase n=2 Tax=Os... 259 2e-67 UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 259 2e-67 UniRef50_A8IL01 Putative diguanylate cyclase n=2 Tax=Azorhizobiu... 259 2e-67 UniRef50_A9L0C9 Diguanylate cyclase n=2 Tax=Shewanella baltica R... 259 3e-67 UniRef50_C8VWV8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 259 3e-67 UniRef50_A8ZX32 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 259 3e-67 UniRef50_Q47Y21 GGDEF domain protein n=1 Tax=Colwellia psychrery... 258 3e-67 UniRef50_A6EXE2 Serine/threonine kinase with two-component senso... 258 3e-67 UniRef50_D1C9S7 Serine/threonine protein kinase n=1 Tax=Sphaerob... 258 3e-67 UniRef50_Q39ZK6 Response regulator receiver modulated diguanylat... 258 4e-67 UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alterom... 258 4e-67 UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Camin... 258 4e-67 UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrery... 258 4e-67 UniRef50_A3Y5H4 Diguanylate cyclase (GGDEF domain) n=1 Tax=Marin... 258 5e-67 UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8F... 257 5e-67 UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis ... 257 7e-67 UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 257 7e-67 UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 257 9e-67 UniRef50_Q2RUX2 Putative diguanylate cyclase (GGDEF domain) with... 257 9e-67 UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgar... 257 1e-66 UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3... 257 1e-66 UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desul... 256 1e-66 UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteoba... 256 1e-66 UniRef50_B9ZPE0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 256 1e-66 UniRef50_C9YCX8 Putative uncharacterized protein n=1 Tax=Curviba... 256 1e-66 UniRef50_C3JZH6 Putative regulatory protein n=2 Tax=Pseudomonas ... 256 2e-66 UniRef50_Q3A8D4 Putative sensory transduction system, regulatory... 256 2e-66 UniRef50_Q1JZ09 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 256 2e-66 UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n... 256 2e-66 UniRef50_C6BZS4 Diguanylate cyclase with PAS/PAC and GAF sensors... 256 2e-66 UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 256 2e-66 UniRef50_A1HS81 Response regulator receiver modulated diguanylat... 256 3e-66 UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q... 255 3e-66 UniRef50_Q0A8G7 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 255 3e-66 UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 255 3e-66 UniRef50_Q6AJ00 Putative uncharacterized protein n=1 Tax=Desulfo... 255 4e-66 UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthono... 255 4e-66 UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein... 255 4e-66 UniRef50_D1U9G5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 254 5e-66 UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 254 5e-66 UniRef50_B4VK28 GGDEF domain protein n=1 Tax=Microcoleus chthono... 254 5e-66 UniRef50_Q1K485 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 254 5e-66 UniRef50_B9ZM04 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 254 6e-66 UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 254 7e-66 UniRef50_Q2P4J7 Sensor histidine kinase n=16 Tax=Xanthomonas Rep... 254 7e-66 UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 254 8e-66 UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 254 8e-66 UniRef50_Q2RNX7 Putative diguanylate cyclase (GGDEF domain) with... 254 8e-66 UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus L... 254 8e-66 UniRef50_C1A5L7 Putative two-component response regulator n=1 Ta... 254 1e-65 UniRef50_A1KC69 Conserved hypothetical membrane protein n=1 Tax=... 254 1e-65 UniRef50_Q2SPL3 Response regulator containing a CheY-like receiv... 253 1e-65 UniRef50_D1U6K0 Diguanylate cyclase with PAS/PAC sensor and heme... 253 1e-65 UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliob... 253 1e-65 UniRef50_B0CDD6 Diguanylate cyclase (GGDEF domain) n=2 Tax=Bacte... 253 1e-65 UniRef50_Q1K456 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 253 1e-65 UniRef50_B8EJQ5 Diguanylate cyclase n=1 Tax=Methylocella silvest... 253 1e-65 UniRef50_A4C957 Putative uncharacterized protein n=1 Tax=Pseudoa... 253 1e-65 UniRef50_C5T8F5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 253 1e-65 Sequences not found previously or not previously below threshold: UniRef50_Q07TT8 Diguanylate cyclase n=9 Tax=Bradyrhizobiaceae Re... 296 2e-78 UniRef50_Q4ZR62 GGDEF n=5 Tax=Pseudomonas syringae group RepID=Q... 292 3e-77 UniRef50_C5CZH7 Diguanylate cyclase n=1 Tax=Variovorax paradoxus... 289 1e-76 UniRef50_A8GGC9 Diguanylate cyclase n=1 Tax=Serratia proteamacul... 287 6e-76 UniRef50_C5CYX2 Diguanylate cyclase n=1 Tax=Variovorax paradoxus... 280 9e-74 UniRef50_D1RSU9 Diguanylate cyclase n=1 Tax=Serratia odorifera 4... 280 1e-73 UniRef50_Q48HP3 GGDEF domain protein n=6 Tax=Pseudomonas syringa... 278 4e-73 UniRef50_C9Y2B0 Putative uncharacterized protein n=1 Tax=Cronoba... 268 4e-70 UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 T... 267 7e-70 UniRef50_A0YVI7 Regulatory components of sensory transduction sy... 265 3e-69 UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF s... 264 9e-69 UniRef50_A7MGE2 Putative uncharacterized protein n=1 Tax=Cronoba... 263 1e-68 UniRef50_Q88HW1 GGDEF domain protein n=5 Tax=Pseudomonas RepID=Q... 262 2e-68 UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF s... 261 4e-68 UniRef50_Q04S93 GGDEF domain receiver component of a two-compone... 261 7e-68 UniRef50_Q4UQ33 Response regulator n=3 Tax=Xanthomonas campestri... 260 9e-68 UniRef50_A0YS99 Putative diguanylate cyclase/phosphodiesterase (... 260 9e-68 UniRef50_C6N492 Putative uncharacterized protein n=1 Tax=Legione... 260 1e-67 UniRef50_B1WQB8 Putative diguanylate cyclase n=2 Tax=Cyanothece ... 259 2e-67 UniRef50_B4VMP7 GGDEF domain protein n=1 Tax=Microcoleus chthono... 259 2e-67 UniRef50_C1TNZ5 Diguanylate cyclase (GGDEF) domain-containing pr... 259 2e-67 UniRef50_B5VVN4 Response regulator receiver modulated diguanylat... 257 8e-67 UniRef50_B2J0M5 Diguanylate cyclase with PAS/PAC and GAF sensors... 256 2e-66 UniRef50_B2A6L1 Response regulator receiver modulated diguanylat... 255 3e-66 UniRef50_C1F117 Sensory box-containing diguanylate cyclase n=1 T... 255 3e-66 UniRef50_B3PKF1 Response regulator n=1 Tax=Cellvibrio japonicus ... 254 5e-66 UniRef50_C5S6P4 Diguanylate cyclase n=1 Tax=Allochromatium vinos... 254 6e-66 >UniRef50_Q3Z0N3 Cellulose synthesis regulatory protein n=28 Tax=Enterobacteriaceae RepID=YEDQ_SHISS Length = 569 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 558/564 (98%), Positives = 562/564 (99%) Query: 1 MQHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHL 60 +QHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHL Sbjct: 6 VQHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHL 65 Query: 61 ENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNR 120 ENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLR+AVTEFEQHRDEHAW+IELNR Sbjct: 66 ENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRNAVTEFEQHRDEHAWQIELNR 125 Query: 121 RRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRA 180 RRTL VNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHN+SSMVEQAMYVSRA Sbjct: 126 RRTLSVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNTSSMVEQAMYVSRA 185 Query: 181 GFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV 240 GFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV Sbjct: 186 GFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV 245 Query: 241 SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGN 300 SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGN Sbjct: 246 SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGN 305 Query: 301 IFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI 360 IFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI Sbjct: 306 IFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI 365 Query: 361 ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA 420 ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA Sbjct: 366 ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA 425 Query: 421 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE Sbjct: 426 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 485 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 540 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ Sbjct: 486 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 545 Query: 541 SLADRRLYLAKQAGRNRVFASDNA 564 SLADRRLYLAKQAGRNRV ASDNA Sbjct: 546 SLADRRLYLAKQAGRNRVCASDNA 569 >UniRef50_Q5PLI4 Cellulose synthesis regulatory protein n=77 Tax=Enterobacteriaceae RepID=YEDQ_SALPA Length = 570 Score = 590 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 370/562 (65%), Positives = 466/562 (82%) Query: 1 MQHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHL 60 M HET ++NQ W KKLARR GPGHVVN CF++V+LFSTLLTWREV++L+DAY++SQRNHL Sbjct: 1 MPHETLLDNQGWFKKLARRFGPGHVVNTCFLIVMLFSTLLTWREVMILKDAYVASQRNHL 60 Query: 61 ENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNR 120 +VAN LD+ LQ+N+D+LIFLRNGM EALVAPL F++L+ AVT+FEQ R H W++EL++ Sbjct: 61 GSVANVLDRQLQFNMDRLIFLRNGMHEALVAPLAFSALQSAVTQFEQRRVRHFWQLELDK 120 Query: 121 RRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRA 180 RRTLP+ GVSD V+ LLSRE+ L NE+TA LE+GYL RLA +S+ + + MYVSR+ Sbjct: 121 RRTLPLYGVSDQFVARTTLLSRESRDLANELTATLELGYLARLARSSAMLTLETMYVSRS 180 Query: 181 GFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV 240 GFY+ST PT + ++ +RYY YVTQPWFI SQR N R VRWFTS + ++ + +VT Sbjct: 181 GFYLSTLPTAYGSDIVSRYYQYVTQPWFIEQSQRRNPQRGVRWFTSAQPYVTDEQKKVTA 240 Query: 241 SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGN 300 S+P+D +NYWYGVL M IPV ++Q+FLR+A +K+++GEYQLYD+ LR LT S P+ T N Sbjct: 241 SLPLDHDNYWYGVLAMDIPVASLQRFLRDAAEKDIEGEYQLYDNHLRLLTDSAPEQQTAN 300 Query: 301 IFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI 360 + RE ALLA+ +E DT GG+R+ + YVSWERLDHFDGVL+RVHTL EG++G+FGSISI Sbjct: 301 TLNDRERALLAREIEKDTLGGLRLGTHYVSWERLDHFDGVLLRVHTLREGIQGNFGSISI 360 Query: 361 ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA 420 ALTLLW LFT MLLISW VIR +V NM+VLQ+SLQWQAWHD LTRLYNRGALFEKA LA Sbjct: 361 ALTLLWVLFTAMLLISWGVIRHIVKNMFVLQNSLQWQAWHDPLTRLYNRGALFEKASRLA 420 Query: 421 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 K + + PFSVIQ+DLD+FK++NDRFGHQAGDRVLSHAAGLI S++RA D+AGRVGGEE Sbjct: 421 KRYREARQPFSVIQLDLDYFKSVNDRFGHQAGDRVLSHAAGLIGSTIRAHDIAGRVGGEE 480 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 540 FC++LPGA+ +A ++AERIR ++N+KE+L+ KSTT+RISAS+G+SS+EE GDYDFEQLQ Sbjct: 481 FCIVLPGATKAQALQIAERIRQRINDKEILVTKSTTLRISASMGISSAEEYGDYDFEQLQ 540 Query: 541 SLADRRLYLAKQAGRNRVFASD 562 SLAD+RLY AKQ+GRNR+ ASD Sbjct: 541 SLADKRLYYAKQSGRNRICASD 562 >UniRef50_C8QGL2 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b RepID=C8QGL2_9ENTR Length = 550 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 219/549 (39%), Positives = 320/549 (58%), Gaps = 6/549 (1%) Query: 16 LARRLG-PGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANALDKHLQYN 74 L R+ G P V+LCF+ V LFS LT E + L+ +Y QR L + LD Q + Sbjct: 6 LPRQSGNPFLPVHLCFLAVFLFSAFLTVHEALELKTSYEDRQRAQLAEIQKNLDSQFQES 65 Query: 75 VDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALV 134 VD+L++ + + AL+ PLD + R+AV F+ R W+++LN R++P+NGV DA + Sbjct: 66 VDELVYYQKMLSYALMHPLDSDNAREAVQRFQTLRQRPLWQLQLNSPRSMPLNGVGDAWL 125 Query: 135 SEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRN 194 + LL R++ +D EI AALE ++++ + + Y+SRAGFY+S++P + Sbjct: 126 ARDPLLKRDSALIDQEIRAALEFSFIMQFSDPDHDFHSRFWYISRAGFYISSRPPQSPQE 185 Query: 195 VPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVL 254 + Y V + +F ++N +RW TS + + +T+S P+ SN YWYGVL Sbjct: 186 LEQSYATMVQRAYFRALDPQQNISPQLRW-TSGYQGLFDEGLMLTLSAPIISNGYWYGVL 244 Query: 255 GMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSN-PDHPTGNIFDPRELALLAQA 313 M P ++ L L G D K+ +T + PD N +E L Sbjct: 245 SMDFPQARIRNLLAETRHTLLQGNLVFLDRKMNEVTRLHAPDEIPLNAEHRQE---LLNR 301 Query: 314 MEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTML 373 M+H+ G +R+ +++ SW +L + DG ++ V TL +G++ + G +++ L +W LF ML Sbjct: 302 MQHERSGILRLGTQFASWSKLTNVDGYIINVQTLKQGMKQELGRVTLFLLSMWLLFILML 361 Query: 374 LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 ++ VI R+V L L W+A +D LTRL NR A FE+ A CQ Q P SVI Sbjct: 362 AVAHQVIFRLVRRQDELSERLTWRANYDGLTRLLNRSAFFEQFVAQAAHCQQLQRPLSVI 421 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEA 493 Q+D+DHFK +ND +GH AGD+ L A +IS +LR DVAGR+GGEEFC++LP +L EA Sbjct: 422 QLDVDHFKKVNDTWGHHAGDQALIRVASVISHTLRKYDVAGRIGGEEFCIVLPETTLAEA 481 Query: 494 AEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 + VAERIR +L K +L+ STT I+ S GV+SSEE GDYD E LQ+ AD RLYLAK Sbjct: 482 SAVAERIRARLAAKTILVNASTTFNITLSAGVTSSEEQGDYDAESLQAKADSRLYLAKTN 541 Query: 554 GRNRVFASD 562 GRNRV ++D Sbjct: 542 GRNRVCSAD 550 >UniRef50_C9XVB6 Cellulose synthesis regulatory protein n=9 Tax=Enterobacteriaceae RepID=C9XVB6_CROTZ Length = 524 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 259/522 (49%), Positives = 353/522 (67%), Gaps = 3/522 (0%) Query: 40 LTWREVVVLEDAYISSQRNHLENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLR 99 +TWRE V+L+DA+ISSQRN L+++A A+D++LQY+VDKL+F R GMR A+ L+ Sbjct: 1 MTWREGVILQDAFISSQRNQLDSIATAMDRNLQYSVDKLLFYRAGMRYAMHNLLEGPQTD 60 Query: 100 DAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGY 159 + F R + W + R + GVSDA +++ LL R+ L NE+ A L +G+ Sbjct: 61 AVMAGFNADRHKREWMLPTGRDLAPEIQGVSDAFIAQSTLLERDEALLYNELNATLALGH 120 Query: 160 LLRLAHNSSSMVE-QAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRH 218 +L +A S E + YVSRAGFY++ P ++P YY V+ WF+ S R N Sbjct: 121 MLSIADARSERPEVRTFYVSRAGFYLTNLPFFGHGSIPELYYQQVSSRWFLDQSLRRNPG 180 Query: 219 RAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAI-DKNLDG 277 R VRW + + + + +VT S+P+D N W+GVL M P+ M+ FL+NA+ D + G Sbjct: 181 RGVRWLHGR-DLSMPSGQRVTASIPLDDNGRWFGVLAMDFPIPAMRDFLQNALNDDDSGG 239 Query: 278 EYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHF 337 E L+D +L +T+++ + T F ++ A LA+ ME G RMD+R+++W +LD+F Sbjct: 240 EILLFDRQLSPITTTSSRNDTALHFTAQDKAALARQMELANEGDARMDTRFIAWAKLDYF 299 Query: 338 DGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQ 397 DGVLV+V T+S+ G FG +++ L LLW LFT ML ISW VI MV NM +Q SL+W+ Sbjct: 300 DGVLVKVTTVSQSAEGKFGKVAMVLGLLWLLFTAMLFISWRVIVGMVRNMLTMQRSLKWR 359 Query: 398 AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLS 457 AW+DTLTRLYNRGA FE+AR AK C Q PFSVIQ+DLDHFK+INDR+GHQAGD+VL+ Sbjct: 360 AWYDTLTRLYNRGAFFERARLAAKTCDAQQAPFSVIQLDLDHFKSINDRYGHQAGDKVLT 419 Query: 458 HAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTI 517 AAG++S SLRA+D+AGRVGGEEFC+ILPG A +VAERIR ++N +E+L+ TTI Sbjct: 420 WAAGMLSRSLRAEDIAGRVGGEEFCIILPGTPSEGARQVAERIRQRINSQEILVRPDTTI 479 Query: 518 RISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 RIS S+G+S + GDYDFE LQS+ADRRLYLAKQ GRN V Sbjct: 480 RISVSVGISEALRDGDYDFEHLQSIADRRLYLAKQRGRNLVC 521 >UniRef50_Q1LHF7 Diguanylate cyclase (GGDEF domain) n=2 Tax=cellular organisms RepID=Q1LHF7_RALME Length = 587 Score = 474 bits (1219), Expect = e-132, Method: Composition-based stats. Identities = 144/581 (24%), Positives = 262/581 (45%), Gaps = 30/581 (5%) Query: 1 MQHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHL 60 M + WL + A + P VV + F + +L ++ R++ +L + + ++ L Sbjct: 1 MAWHKLLPRPRWLPRAAL-IYPQRVVVVGFGLAMLLMLVVAMRDLYLLRERVLILHQHDL 59 Query: 61 ENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDA-VTEFEQHRDEHAWKIELN 119 A + + KL F+R+ ++ L + D + R+E W++++ Sbjct: 60 VLRALGAEAVINAERFKLSFVRDYAQQLLELQQGTKASTDGDIERAYAARNEPVWELQVP 119 Query: 120 RRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSR 179 P+ GVS ++ R +E L ++ AA ++ ++L ++ S ++S Sbjct: 120 LGDA-PIVGVSPQILKGLQGFERRDEDLRADLLAARQLSHVLGVSQRSDRPDGTVTFISS 178 Query: 180 AGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVT 239 GFYV T P L P + ++ + +RW + S T+ + T Sbjct: 179 NGFYV-TYPALPPDRAPALIKRFSGIDYYRSLLPDRDPSHEMRWAQVYTQFES-TQLRTT 236 Query: 240 VSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSN------ 293 +SVPV + GV+ + + +R ++ + + + L L D + SS Sbjct: 237 LSVPVYVAQRFRGVVAVDLEIRRLRDLI--GLPEILGSHRYLLDRNGNVIVSSQTGGKTN 294 Query: 294 ---PDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHF-DGVLVRVHTLSE 349 PD G++ + L++Q G ++ +YV ++R+ + + ++V + Sbjct: 295 LRWPDDFAGDLRNTPVSDLISQGT-----GMRHVNGQYVYFQRVGNAGNWLMVDTLDEYD 349 Query: 350 GVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNR 409 +S+ L +W L ++ ++ V+ + + LQ A D LT+L NR Sbjct: 350 VYATVARRLSLPLLTIWFLLPVLMYVTLRVVTLLFDHYLAAGRKLQQMAETDPLTQLANR 409 Query: 410 GALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRA 469 E+ + Q P +++ +D+D+FK +ND++GH +GD VL A L+ LR Sbjct: 410 RRFSEQFKKETARRQRDGTPLAMLMLDIDYFKRVNDKWGHASGDCVLMAMADLMRKHLRE 469 Query: 470 QDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLN--------EKEMLIAKSTTIRISA 521 D R+GGEEF V+LPGAS EA AER+RL + + IR + Sbjct: 470 IDFPARLGGEEFAVLLPGASSDEAVAAAERLRLAVEAAFVEAAPDAPQPDTGDGRIRFTV 529 Query: 522 SLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 S+GV+ + G + + ++ADRRLY+AK+AGRNRV A+D Sbjct: 530 SIGVAEAGTDGCQTLDAMLAVADRRLYVAKEAGRNRVCATD 570 >UniRef50_Q46VS6 GGDEF n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46VS6_RALEJ Length = 584 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 149/583 (25%), Positives = 264/583 (45%), Gaps = 31/583 (5%) Query: 3 HETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLEN 62 + WL +LA + P VV CF VVLL + ++ R+V ++ + + +++++LE Sbjct: 2 WRRSLPQPRWLPRLAV-MRPHRVVVGCFAVVLLLALVVGLRDVYLVRERDLRARQHNLEL 60 Query: 63 VANALDKHLQYNVDKLIFLRNGMREA--LVAPLDFTSLRDAVTEFEQHRDEHAWKIELNR 120 A ++ L+ +L +L + A D + A+ + R+ W+++L Sbjct: 61 RALGVEAVLEGERRRLEYLSTYAERLFEIQASADAVAPDAAIRQAYAQRNATVWQMKLPL 120 Query: 121 RRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRA 180 + GV A ++ R + L ++ + LL L+ + + A+++S Sbjct: 121 -DGPALIGVGPAGLTGLRSFDRRDPDLMADLYVGRMISELLGLSIRADHVQGNAIFISSN 179 Query: 181 GFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV 240 GF+V+ P + P+ + + P++ G + N R + W + S T+ Sbjct: 180 GFFVA-YPAIDPAVAPSMMQRFDSMPYYRGQTPEVNPGRELYWVPMYDDFQSKRR-MTTL 237 Query: 241 SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNL--------DGEYQLYDSKLRFLTSS 292 SVP+ + + GV+ + + + + + LR A D + D +R + Sbjct: 238 SVPIYAGQQFRGVVAIDVEQKRLDELLRAASDPGAVQYMMNAHGDVLAISDDPVRKVQKW 297 Query: 293 NPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVR 352 PD GN D L A+ G ++ D Y+ + R +L+ + + Sbjct: 298 -PDAVPGNWKDFAPADLFARG-----SGMVKHDGDYLLFHRAPQSPWLLMDLVPARKLYA 351 Query: 353 GDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGAL 412 F S+S L ++W L +L I+ V+ ++ + L LQ A D LT L NR + Sbjct: 352 SMFASMSRPLLMIWVLLPLLLWITLKVVTQLFDHYIALGEKLQEIARQDPLTGLANRRRM 411 Query: 413 FEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDV 472 E A+ + + P +++ +D+D FK +ND +GH +GD+VL A + ++LR D Sbjct: 412 RELAQSEFERQKRDGQPLALVMIDIDFFKKVNDHWGHASGDKVLVELARTMRANLRNVDQ 471 Query: 473 AGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA-------KSTTIRISASLGV 525 R+GGEEF V++P SL EAA+ AER+R + + IR + S+GV Sbjct: 472 PARLGGEEFAVLMPNTSLAEAAQSAERLRRAIAACVVEADLEACVERADRIIRFTISVGV 531 Query: 526 SSSEETGDY----DFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 + + + L ++ADRRLY AK GRNRV + DNA Sbjct: 532 AEARGEAADGVPMTLDGLAAIADRRLYDAKTQGRNRVVSDDNA 574 >UniRef50_Q1LM75 Diguanylate cyclase (GGDEF domain) n=2 Tax=Cupriavidus RepID=Q1LM75_RALME Length = 586 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 141/558 (25%), Positives = 246/558 (44%), Gaps = 20/558 (3%) Query: 12 WLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANALDKHL 71 WL + R P + + F +L LL +R +++ DA I S R A +++ L Sbjct: 21 WLALIRR---PRRFILIAFSAAILLILLLIFRGMMLSRDAEIESVRQMQAVRAVSINALL 77 Query: 72 QYNVDKLIFLRNGMREALVAPLDFTSL--RDAVTEFEQHRDEHAWKIELNRRRTLPVNGV 129 Q ++L +RN + + +L D T FE HR++ W L R PV GV Sbjct: 78 QLEAERLTNIRNYAEHLMQIQDELPALFAHDIQTAFE-HRNDDVW--ALRTRDAAPVFGV 134 Query: 130 SDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPT 189 S A ++ + R++ L + A+ + ++ HN + E+ YVS G V+ P Sbjct: 135 SAAQLTGLDGFLRDDAKLIPSMAVAIALSHMFSAGHNEPGLRERIAYVSGNGIIVA-YPA 193 Query: 190 LFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNY 249 + ++V + +F + N R +W ++ E + +S PV + N Sbjct: 194 ISEQDVNPTLRSLASAAYFRNNLPLANPTRKQQWSIAR-SMDDIGESSLFLSAPVYAGNA 252 Query: 250 WYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGN-----IFDP 304 + VL + IP ++ + L A +++ L D + +S + G + + Sbjct: 253 FKAVLILEIPRHSLDESLNVAPHHDVNN--YLVDHNGALVGASMRNVHRGESLASVLINK 310 Query: 305 RELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTL 364 LA A D + + +L + ++V + E ++ +S A+ Sbjct: 311 WPADKLAVAFRSDAGILSNEHGSRLIYRKLGNSGLIMVDEVSTRELLQASVARLSGAIGA 370 Query: 365 LWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQ 424 +L + ++ + + +L+ A D LT L NR + C+ Sbjct: 371 GAVALGLLLCFTLAIVHTLFGHYIARGEALRTLAETDALTGLANRRVFASRFADAYAWCK 430 Query: 425 THQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVI 484 P S+I +D+D FK INDR+GH +GD VL A + +++R D+ R+GGEEF V+ Sbjct: 431 RDAVPVSLIMLDIDRFKKINDRWGHASGDVVLRTLADALRANVRNVDLPARLGGEEFAVL 490 Query: 485 LPGASLTEAAEVAERIRLKLNEK---EMLIAKSTTIRISASLGVSSSEETGDYDFEQLQS 541 LP + +AA +AE++RL L + + +IR +AS GV+ + + L Sbjct: 491 LPRTGIADAANLAEKLRLALQALVCEPVDSDDTASIRFTASFGVAQIAPDEPGNLDSLLM 550 Query: 542 LADRRLYLAKQAGRNRVF 559 +AD+RLY AK GRN+V Sbjct: 551 VADQRLYAAKAGGRNKVV 568 >UniRef50_D1TJS9 Response regulator receiver protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TJS9_9BURK Length = 577 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 113/569 (19%), Positives = 215/569 (37%), Gaps = 44/569 (7%) Query: 10 QSWLKKLARRLGPGHVV-NLCFIVVLLFSTLLTW-REVVVLEDAYISSQRNHLENVANAL 67 W + +L + ++C+ V + + + R+V A S+ +N V Sbjct: 14 PFWRIRARIQLCKRLPMRHVCYAYVFVGRVIGRYCRDVAAFSRATFSASQNQKRMVTRRP 73 Query: 68 DKHLQYNVD--------KLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELN 119 + + +V + L +AL D + + + + R+ + + L Sbjct: 74 NNVIAISVLLAGAILAIAVSLLAQMREDALRRAQDSIANISLLVQRDVSRNLEIYDLSLR 133 Query: 120 RRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSR 179 ++G+ V + R+ D I+A ++G + L N + SR Sbjct: 134 ----AVIDGLRQPGVLDLPPAIRQMVLFDGSISAQ-DMGSVFVLDEN-----GNVRFDSR 183 Query: 180 AGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVT 239 A P R + + + +F R + + ++ + ++ Sbjct: 184 A--------------WPPRAHSHADRDYFKVQ--RASPDVGLYISHPFSRSGTDEDLRIA 227 Query: 240 VSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSN--PDH 296 +S + + + GV+ ++ + + L + + G L S L P Sbjct: 228 LSRRISRPDGSFGGVVVGTLRLTYFHR-LFDGMKLGPSGSMALMLSDGTMLMRRPYDPKT 286 Query: 297 PTGNIFDPRELALLAQAMEHDTRGGIRMD--SRYVSWERLDHFDGVLVRVHTLSEGVRGD 354 N+ + + D G +D R+ ++ +D F +++ V + + Sbjct: 287 IGINLTGTANFSRFVKQPSGDFFGTAAIDRVERWYAFRHIDGF-PLILDVALSTRDIYVQ 345 Query: 355 FGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFE 414 + + + L ++ + R + + L+ A D LT L NR E Sbjct: 346 WRRRAWIIGTLIVALDVTIIALAILFSRQLRLRRAAEEELRELARTDGLTGLNNRRTFEE 405 Query: 415 KARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVA 473 + Q + P S++ +D+D+FK ND +GH AGD L A I+ ++ R D A Sbjct: 406 HVNDEWRRAQRNGRPLSLLLIDVDNFKGFNDLYGHSAGDEALIGVARCIAQNVRRPGDTA 465 Query: 474 GRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGD 533 R GGEEF V+LP T A +AE+IR + + ST ++ S G +++++ Sbjct: 466 ARFGGEEFAVLLPDTDATGAQRIAEQIRAAVQALQCRHVASTHHVLTVSAGAATAQDAAF 525 Query: 534 YDFEQLQSLADRRLYLAKQAGRNRVFASD 562 L AD+ LY AK GRNRV D Sbjct: 526 ATSRALVDAADQALYRAKDGGRNRVMVFD 554 >UniRef50_D0J6R3 Diguanylate cyclase n=23 Tax=Burkholderiales RepID=D0J6R3_COMTE Length = 521 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 101/490 (20%), Positives = 184/490 (37%), Gaps = 34/490 (6%) Query: 81 LRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLL 140 L + + ++ + + E + R+ + + L ++G++D V + Sbjct: 40 LYQSRLDTMKHAVETSRNVALLAENDVVRNLELYSLSLQ----AVIDGLNDPEVMAASPH 95 Query: 141 SRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYY 200 RE D TA+ +G +L L + + + Sbjct: 96 LREVALFDKAATAS-YLGSILILDT-------------------EGNIAIDAQKINPGNV 135 Query: 201 GYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIP 259 +F H REN + + + + +S + ++ + GV+ + + Sbjct: 136 NLSGHDFFTVH--RENSAKGLYVGDPYASPLHDGALSIPLSRRISHADGSFAGVVLIDVQ 193 Query: 260 VRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPD--HPTGNIFDPRELALLAQAMEHD 317 + ++ L + + +G L + D NI + E Sbjct: 194 LEYFRK-LFSGLSLGENGSLALIRKDGAMMMRQPFDAKVIGRNIRNASTFKRFIAEPEGS 252 Query: 318 TRGGIRMDS--RYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLI 375 +D R ++ L ++ V + + ++ + L + T + Sbjct: 253 FSDTSYLDGTHRLYYFKNLPSL-PFIIMVAKAHSDIFTAWRKRALIIACLMGVLTAAFIG 311 Query: 376 SWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQV 435 + + +S L A D LT L NR L E + + FS++ V Sbjct: 312 LSFAFVTQLQRRIHAESELALLARTDGLTGLNNRRRLDEMLDQEWHRARRNHSIFSLLFV 371 Query: 436 DLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAA 494 D+D FK ND +GHQAGD V++ A I ++ R D+A R GGEEF V+LP SL A+ Sbjct: 372 DIDRFKVYNDTYGHQAGDDVIATIAQCIGDNIRRPGDIAARYGGEEFIVVLPDTSLEGAS 431 Query: 495 EVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAG 554 +AE IR +++ + + S I+ S+G ++ E D D + AD LY AK G Sbjct: 432 CLAESIRAAVSQLSVEHSGSEFGYITVSIGCAAWEPEHDADVASVIRSADEALYKAKTTG 491 Query: 555 RNRVFASDNA 564 RN+V + Sbjct: 492 RNKVVVFTKS 501 >UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Arthrospira RepID=B5W0E3_SPIMA Length = 1380 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 108/519 (20%), Positives = 190/519 (36%), Gaps = 28/519 (5%) Query: 53 ISSQRNHLENVANALDKH-LQYNVDKLIFLRNGMR-EALVAPLDFTSLRDAVTEFEQHRD 110 I S + L+N N + L ++ +L+ ++ ++ + S + F R+ Sbjct: 877 IVSTTHQLDNQGNFVGAISLLTDISQLVSIQEALKTSEMQLSGILNSSEYGIMAFRSVRN 936 Query: 111 EH----AWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHN 166 E ++ L V G S + LL E + + + + + Sbjct: 937 EQGKIIDFEWLLVNPSAGKVVGKSADELIGKRLLEE-----LPEYQESGLFEHYVEVVES 991 Query: 167 SSSMVEQAMYVS-RAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFT 225 S+ ++ Y F+ + N R Sbjct: 992 EKSVKKEFYYNQYGIDFWFENISVKLGDGFAVTFRDITGIKQSEKALSLANEQLNNRI-- 1049 Query: 226 SQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQL--YD 283 E + +S + +++ L + + L + G + + Sbjct: 1050 --NELDQRHAEMLLLS---EISDFMQAALTVQEACEAISYLLEPLFPECAGGIFLMAASR 1104 Query: 284 SKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVR 343 L ++S + + ++F P++ L + H ++ + Sbjct: 1105 DSLEMISSWGKECTSVSVFVPKDCWALRRGRVHLC--NHEKGGISCRHIQVSSTLSCTLC 1162 Query: 344 VHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQ--SSLQWQAWHD 401 V +++G G ++ AL ++ V ++ + L ++L+ Q+ D Sbjct: 1163 VPMMAQG--ETLGLFYLSTDSATALSEGKQQLAHTVAEQIGMAIANLNLRATLEHQSIRD 1220 Query: 402 TLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAG 461 LT L+NR L E Q +HP VI +D+D+FK ND FGH AGD VL Sbjct: 1221 PLTGLFNRRYLEEYLSQEIARAQRQKHPIGVIMMDIDNFKHFNDTFGHDAGDYVLQKVGE 1280 Query: 462 LISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISA 521 L+ +R DVA R GGEE +ILPG+SL + AE+IR + + I+A Sbjct: 1281 LLKQKVREYDVACRYGGEEMTLILPGSSLENTSMRAEQIREAIASLVVASGGQHLGSITA 1340 Query: 522 SLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 S GV++ + G + L AD LY AK GRNRV Sbjct: 1341 SFGVAAFPKHGSIGID-LIQAADAALYRAKADGRNRVVI 1378 >UniRef50_B2SWP1 Diguanylate cyclase n=5 Tax=Burkholderia RepID=B2SWP1_BURPP Length = 516 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 105/513 (20%), Positives = 192/513 (37%), Gaps = 42/513 (8%) Query: 60 LENVANALDKHLQYNV--------DKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDE 111 V + + ++ + L +AL D + E + R+ Sbjct: 5 KAMVTRRPNIVIAISIVLASAILAIAVWVLAQMRDDALRRAQDSVFNVSLLVERDVSRNL 64 Query: 112 HAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMV 171 + + L ++G+ V E + R+ D +A ++G +L Sbjct: 65 EIYDLSLR----AVIDGLKQPGVLELDPAIRQMVLFDGSA-SAKDMGSILVTDEA----- 114 Query: 172 EQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHA 231 + S + P R + +F R++ + + Sbjct: 115 GNIKFDS--------------QATPPRRVNLSDRDYFKVQ--RDSTNVGLYISHPFVPKV 158 Query: 232 SNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLT 290 S E + +S + + + GV+ ++ + ++ L ++ G L S L Sbjct: 159 SGKEISIAMSRRITRPDGSFGGVVVGTMRLTYFRR-LFAGMNLGAGGSMALMLSDGTMLM 217 Query: 291 SSNPD--HPTGNIFDPRELALLAQAMEHDTRGGIRMD--SRYVSWERLDHFDGVLVRVHT 346 D N+ + Q D G +D R+ ++ + +++ V Sbjct: 218 RRPFDPKIIGINLTGTANYSRFTQQPSGDFFGTAAIDGVERWYAFRHI-DMYPLILDVAL 276 Query: 347 LSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRL 406 + + ++ + + L A ++ + + + L+ A D LT L Sbjct: 277 STRDIYVEWRHRAWIIGSLIAALDVTIIALAVLFSYQLRYRRAAEEELRVLARTDGLTGL 336 Query: 407 YNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSS 466 NR E A + Q + P S++ +D+D FK ND +GH AGD L+ A IS S Sbjct: 337 NNRRTFEEHAEDEWRRAQRNAWPLSMLLIDVDSFKGFNDLYGHSAGDDALTAVARCISQS 396 Query: 467 L-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGV 525 + R D A R GGEEF V+LP T AA +AE+IR + ++ S+ ++ S+G+ Sbjct: 397 VRRPGDTAARYGGEEFAVLLPDTDETGAAFIAEKIRAAVQALQLRHVASSQHVLTVSIGI 456 Query: 526 SSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +++ L + AD LY AK AGRNRV Sbjct: 457 ATTRGEAFATSRALLNAADDALYEAKDAGRNRV 489 >UniRef50_Q3JJL8 GGDEF domain protein n=52 Tax=Burkholderia RepID=Q3JJL8_BURP1 Length = 528 Score = 343 bits (881), Expect = 9e-93, Method: Composition-based stats. Identities = 111/481 (23%), Positives = 191/481 (39%), Gaps = 22/481 (4%) Query: 91 APLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNE 150 A + + S RDA + +E + R + + +S V + +LD Sbjct: 63 ARVLYQSHRDAYLHAVDNAHNLVLLLERDIARNVELYDLSLQAVV-DGVNDPRIMALDPA 121 Query: 151 ITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIG 210 I A + + + ++ G V P + + +F+ Sbjct: 122 IRAKVLFDRA-----ATGKYLGTISVMNEHGDIVLDSHFPH----PPAVANFSYRDYFVY 172 Query: 211 HSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRN 269 R++ + + P + +S + ++ + GV+ ++ + + L + Sbjct: 173 Q--RDHPKGGLYIGEPYAARLRHGAPTIALSRRITRADGSFGGVVVGTLGIDYFRSLL-D 229 Query: 270 AIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTR-----GGIRM 324 + DG ++++ +T D P + AL A EHD I Sbjct: 230 GLSVGPDGTAAVFETNGLMITRLPFD-PKMVGRSIADSALYAHVREHDAGVFTGVASIDG 288 Query: 325 DSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMV 384 R ++RL ++V V V + + L +L +F ++ ++ R + Sbjct: 289 VRRLYVYKRLQGL-PIVVNVSPAERHVFMQWRIRAQRLGVLMLVFGIAIVGGTALLAREL 347 Query: 385 SNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAIN 444 + LQ A D LT L NR A E R P S++ VD+D FK N Sbjct: 348 RWRRHAEMRLQRLARTDALTGLGNRRAFDENLRSEWARALRTGRPLSLLFVDIDQFKDYN 407 Query: 445 DRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 D +GHQAGD VL G ++ ++ RA D R GGEEF + LP AA +AE IR Sbjct: 408 DHYGHQAGDDVLREVGGCLAVNVRRAADDVARYGGEEFVITLPDTDAKSAAAIAEYIRRA 467 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 + + ++ +S R++ S+G+ +S E + L +AD LY AK GRNRV + + Sbjct: 468 VYDLDIEHVRSPYARVTVSIGLVTSHEHIAHSDATLVKMADAALYQAKSTGRNRVCGAQH 527 Query: 564 A 564 A Sbjct: 528 A 528 >UniRef50_Q2T680 GGDEF domain protein n=32 Tax=Burkholderia RepID=Q2T680_BURTA Length = 506 Score = 341 bits (874), Expect = 6e-92, Method: Composition-based stats. Identities = 109/477 (22%), Positives = 189/477 (39%), Gaps = 23/477 (4%) Query: 91 APLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNE 150 A + S DA ++ IE + R+ + G + A ++ L R +L + Sbjct: 40 AAILRDSRDDAFEHAQRAARNTLQMIERDVTRSFALYGGTLARIA-AQLGDRRIAALPAD 98 Query: 151 ITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIG 210 + + AMYV A +V+ T + + +F Sbjct: 99 LRREILFDSAAAANEA------GAMYVLDARGHVTLASTRGPL----PTASFASYDFFAA 148 Query: 211 HSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVD-SNNYWYGVLGMSIPVRTMQQFLRN 269 R++ + EP V +S V+ ++ + GV+ +++ V ++Q L Sbjct: 149 Q--RDSPALGTYLSGPYRMPSRGGEPCVALSRRVERADGAFAGVVVLAVRVAYLRQLLAA 206 Query: 270 AIDKNLDGEYQLYDSKLRFLTSSNPDHP----TGNIFDPRELALLAQAMEHDTRGGIRMD 325 A G L + R + D + ++ E I Sbjct: 207 A-SAGPHGVLALVHADGRIVARMPFDETLVGLDLSGTSLYSRMQFGRSGEFFDVEPIDHM 265 Query: 326 SRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVS 385 R+ + RLD ++V+V + + + + ++ +F + ++ + + Sbjct: 266 KRFYLYRRLDGV-PLVVQVAIADDDIYATWRVRAWRFGVVTGVFALIFVVMSAYLAHSLW 324 Query: 386 NMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAIND 445 +++L A D+LT L+NR AL E + + P +++ VD+DHFK ND Sbjct: 325 RKSTAEAALARLAGTDSLTGLHNRRALDETLEREWRRAVGGERPLAILFVDIDHFKRYND 384 Query: 446 RFGHQAGDRVLSHAAGLI-SSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKL 504 +GHQ GD VL+ + I + R DV R GGEEF V+LP A VAER+RL + Sbjct: 385 TYGHQVGDEVLATVSRCIAQQAARLGDVVARYGGEEFVVVLPDTPRGGALVVAERVRLGV 444 Query: 505 NEKEMLIAKSTTIRISASLGVSSSEETGDYDFE--QLQSLADRRLYLAKQAGRNRVF 559 + S ++ S+GV+ + G + AD+ LY AK AGRNRV Sbjct: 445 RMLGIEHEGSEVGFVTVSVGVAVWQPDGARAPHIAAIVEAADQALYQAKAAGRNRVV 501 >UniRef50_Q2RVQ9 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RVQ9_RHORT Length = 508 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 115/485 (23%), Positives = 197/485 (40%), Gaps = 26/485 (5%) Query: 89 LVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLD 148 LV L +D + E+ I+ + RRT+ + ++ + + E + + L Sbjct: 30 LVTVLLANLWKDTTRDAERSASNLIRLIDADVRRTIELYDLALSGIIEAEKF-KTIKDLS 88 Query: 149 NEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWF 208 E AL ++ ++ + + ++ AG ++ + ++ R + + +F Sbjct: 89 PEARHALIFSRVV-----ATHYMGGLLRLNAAGDIIA-----DSTSLEPRVGNFADRDYF 138 Query: 209 IGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFL 267 + + + S+ E ++ ++ V ++ + GV+ ++ V L Sbjct: 139 --QLHKADPDLGLLIGRPIKVRLSDQEWRIPITRRVSTADGRFDGVVMGAMRVSYFDH-L 195 Query: 268 RNAIDKNLDGEYQLYDSKLRFLTSSNP----DHPTGNIFDPRELALLAQAMEHDTRGG-- 321 +D G L S L D N D + + G Sbjct: 196 FGKLDIGSQGSITLLKSDGTLLARRGLPGELDMVGRNGLDFPNFHRIINGYSKNFSGSSA 255 Query: 322 IRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIR 381 R S+ +++ ++V V + V G + +I + + + + ++ Sbjct: 256 YDHIRRIYSFAHVENL-PLIVVVALSANEVYGGWIQAAIVVGGITFVLCLGVGAVVVLLL 314 Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 R + +S+L A D LT L NR L E R +Q P +++ +D+DHFK Sbjct: 315 REFRQRRLTESALSELAVTDGLTGLCNRRHLEEVLRVECARSARNQQPLALLMIDVDHFK 374 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERI 500 A NDR GH+ GD VL A +I + L R DV R GGEEF VILP L VAE I Sbjct: 375 AFNDRHGHRIGDGVLVDLAVIIRALLKRPADVGARYGGEEFAVILPDTDLAGGLRVAEAI 434 Query: 501 RLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF- 559 R ++ + + + S+GV S T Y + L AD+ LY AK AGRNRV Sbjct: 435 RARMAGRPPVGQDLRAG--TVSIGVVSRILTPGYGVDDLVMDADKALYAAKGAGRNRVVP 492 Query: 560 ASDNA 564 A+D A Sbjct: 493 AADEA 497 >UniRef50_A9AKV8 Diguanylate cyclase n=24 Tax=Burkholderia RepID=A9AKV8_BURM1 Length = 529 Score = 337 bits (865), Expect = 6e-91, Method: Composition-based stats. Identities = 111/480 (23%), Positives = 175/480 (36%), Gaps = 21/480 (4%) Query: 91 APLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNE 150 A + + DA + R + + +S V EG EN+ Sbjct: 54 AIVLYEGRIDARERARTTLQNLVLMASWDIERNIEIYSLSLQAVVEG-----ENDPAIVA 108 Query: 151 ITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIG 210 + L L A + + + SR + ++ R + P+F Sbjct: 109 LPMPLRRQVLFDRATTARYLGGIYVLDSRGNI------AVDGKSDVPRNANFADAPYFSV 162 Query: 211 HSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRN 269 H R+ + P + +S + ++ + G+ MSI + + Sbjct: 163 H--RDRPDVGLYVSDPYRSRLRGGSPSIALSRRITRADGSFGGIAVMSIRLEYFRDLFSR 220 Query: 270 AIDKNLDGEYQLYDSKLRFLTS--SNPDHPTGNIFDPRELALLAQAMEHDT--RGGIRMD 325 + G L + + +P NI +A E R I Sbjct: 221 LALGD-RGAMSLIGTNGVMVMREPYDPKIVGRNISQASTFRQFMRAREGSFFDRASIDGV 279 Query: 326 SRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVS 385 R ++ LD+ +++ V + + +I + AL + ++ + Sbjct: 280 RRLYAFRHLDNL-PLIMMVAESESEIYAAWYDRAIPIGSAMALLALGFVGLSLLLDVQLR 338 Query: 386 NMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAIND 445 + ++ LQ A D LT L NR L + QH S++ VD+DHFK ND Sbjct: 339 KRHRAETELQALARTDGLTGLDNRRMLDVTLAREWRRAARSQHALSLLFVDVDHFKRYND 398 Query: 446 RFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKL 504 GHQAGD L+ I+ L R D A R GGEEF VILP A +AE IR + Sbjct: 399 SQGHQAGDDALAAVGRCIAGCLRRPADYAARYGGEEFVVILPDIGSDGAVAIAETIRTSI 458 Query: 505 NEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 E + S ++AS+GV++ D D LAD LY AK+ GRNRV A Sbjct: 459 LELGIRHDGSAFGCLTASIGVATCRPDRDDDMHAALKLADDALYRAKETGRNRVVVLTAA 518 >UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms RepID=A8I8X7_AZOC5 Length = 510 Score = 337 bits (864), Expect = 8e-91, Method: Composition-based stats. Identities = 102/435 (23%), Positives = 181/435 (41%), Gaps = 26/435 (5%) Query: 138 NLLSRENESLDNEITAALEVG---YLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRN 194 +LL RE + ++ + G ++R ++S + + + +S +G V++ Sbjct: 78 DLLLREAAAQIVDLPPSRGTGAPANIIRRTMDASRIPAEMILISESGKLVAS------SR 131 Query: 195 VPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGV 253 PT + +FI R+ + + EP V +S + DS+ + GV Sbjct: 132 HPTNGEQAADRDYFIIQ--RDQPATGLYLSRPFRNRL-DQEPCVALSRRLTDSHGNFAGV 188 Query: 254 LGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSN----PDHPTGNIFDPRELAL 309 L + +P++++++ + L L N+F Sbjct: 189 LAILVPLQSVREMFASLTRHRS-DAISLIRLDGTILVRQPDLGSFGGFGLNVFGRPNFQR 247 Query: 310 LAQAMEHDTRGGIRMDS--RYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWA 367 + + +D RY + R+ ++V V + V + + +A Sbjct: 248 MTTTPQGSFTSTSEIDRVKRYYVFSRVGDL-PLIVVVGVGMDAVTAPWQAQWLAGAATSV 306 Query: 368 LFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQ 427 + ++L + +RR + + ++ + D+LT L NR E + + + Sbjct: 307 VLCLLILGAAVALRREMLRRFEIEQEFLRLSQTDSLTGLPNRRHFDEFGQREWQRAARQR 366 Query: 428 HPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILP 486 +V+ VD+DHFK +NDR GH GDRVL + +I +SL R D AGR GGEEF +ILP Sbjct: 367 SSIAVLMVDIDHFKQVNDRIGHPGGDRVLREVSDIIRASLHRPGDFAGRYGGEEFAIILP 426 Query: 487 GASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRR 546 AA VAERIR + ++ S+G+++ ++ AD Sbjct: 427 ETDAPAAAHVAERIRAAIEANT----AEGVAPVTVSIGLAAGLAAPKGTLAEMMIAADHA 482 Query: 547 LYLAKQAGRNRVFAS 561 LY AK+ GRNRV +S Sbjct: 483 LYRAKETGRNRVVSS 497 >UniRef50_D1SRS2 Diguanylate cyclase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SRS2_9BURK Length = 535 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 107/484 (22%), Positives = 183/484 (37%), Gaps = 36/484 (7%) Query: 101 AVTEFEQH-RDEHAWKIELNRRRTLPVNG----VSDALVSEGNLLSRENESLDNEITAAL 155 A + + + L+R ++G V ALVS L R+ L E AL Sbjct: 46 AWRARQAEWQQAQVFAQNLSRAVAQQMDGLATEVGRALVSIEYELERDE--LSPEQLDAL 103 Query: 156 EVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRE 215 + + +++ + ++ + V + P +P + +F+ H R+ Sbjct: 104 QPVLVNQVSLAE-HLHGLFVFGKNGEWLVHSLP------IPPPAANNADREYFVHH--RD 154 Query: 216 NRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKN 274 N + E + +S + D+ + GV+ ++ VR +QQ L+ D Sbjct: 155 NPSTLTYVSRPLKSR-TTGEWVIPLSRRINDAQGGFAGVVLATLRVRHVQQVLQ-GFDVG 212 Query: 275 LDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELA---LLAQAMEHDTRGGIRMDSRYVSW 331 G L + LT P L +++ I R VS+ Sbjct: 213 HKGAIALLRADGTVLTREPFRVEDLGRTLPASQLQQFLQSRSGLAIMPSPIDGVVRLVSF 272 Query: 332 ERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMY--- 388 E + + + E + ++ + + L + Y+IR + Sbjct: 273 EHARNVPLAVAVALSEDEIFTEWRRATAVQIAGILLLLAVIGPAGAYLIRTVKLRRDADL 332 Query: 389 ----------VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLD 438 + ++ A HD LT ++NR A + R + C+ +Q P SV+ D+D Sbjct: 333 RLRTTHEALVEAHARMEHMAEHDGLTGVHNRRAYDRRIREVMAQCRRYQRPVSVVMFDVD 392 Query: 439 HFKAINDRFGHQAGDRVLSHAAGLISSSLR-AQDVAGRVGGEEFCVILPGASLTEAAEVA 497 FK ND GH GD L A ++ S+R D R GGEEF ++LP A +VA Sbjct: 393 FFKRYNDALGHPEGDECLRRVANALAGSIRRPGDFIARYGGEEFAIVLPETDAPGALQVA 452 Query: 498 ERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 + R + + S ++ S GV+ S E+L AD LY AKQ GR+R Sbjct: 453 QAARSAVIALRLPHPGSPFGHVTVSGGVACSPGQEPETPEELLGRADTALYEAKQQGRDR 512 Query: 558 VFAS 561 + + Sbjct: 513 IVVA 516 >UniRef50_B1ZA72 Diguanylate cyclase n=16 Tax=Alphaproteobacteria RepID=B1ZA72_METPB Length = 532 Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats. Identities = 112/483 (23%), Positives = 182/483 (37%), Gaps = 24/483 (4%) Query: 88 ALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESL 147 AL A + F RDA + EQ IE + R + + +S + L + Sbjct: 46 ALSAVMLFDLRRDAWEKAEQTSKNLLQVIERDIARNVEIIDLSLQGIV-DTLKMPGLADM 104 Query: 148 DNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPW 207 D + ++ R + + V G + + VP R + + Sbjct: 105 DPRL---RQLALFDRATTARD--MGVMLVVDENGDTI-----FDAKTVPARRVNNADREY 154 Query: 208 FIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVD-SNNYWYGVLGMSIPVRTMQQF 266 F + ++ EP +S +D + + GV+ S+ + Sbjct: 155 F--QLHKARPDHGLQISPPLISRL-LGEPVTVLSRRIDKPDGSFGGVVQASLKLAYFSA- 210 Query: 267 LRNAIDKNLDGEYQLYDSKLRFLTSSN--PDHPTGNIFDPRELALLAQAMEHDTRGGI-- 322 L + I DG LY L NI G Sbjct: 211 LFDRIGLGQDGAINLYLRDGTRLMRYPAVEADIGANIAGAPTFQRFLAERSGSFTGTSVR 270 Query: 323 RMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRR 382 RY ++ ++ +++ V + + ++ S ++ + L + + ++ + R Sbjct: 271 DGIERYYAFTQVGDL-PLVLNVALGTREIEAEWQSKAVGIGLAILVLCGLTILLSLLFGR 329 Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 + +Q+ L A D LT L NR E AK + P +++ +D DHFK Sbjct: 330 ELRRSADMQAELARLAGTDLLTGLPNRRRFEEAFEQAAKASRRADRPLALLVIDADHFKR 389 Query: 443 INDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 NDR GH GD VL A ++ SL R D+A RVGGEEF V+LP AA +AE I Sbjct: 390 YNDRHGHAVGDAVLKSLAKSLTESLRRPNDLAARVGGEEFAVLLPDTDRAGAARIAEAIH 449 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + + A I+ S+G++ GD E L AD LY+AK++GRNR + Sbjct: 450 AAVAGLAVPAAGIDPGSITVSIGLAV--SAGDRATEDLYRRADAALYVAKESGRNRTCCA 507 Query: 562 DNA 564 A Sbjct: 508 PGA 510 >UniRef50_B1G121 Diguanylate cyclase n=4 Tax=Burkholderia RepID=B1G121_9BURK Length = 524 Score = 331 bits (849), Expect = 4e-89, Method: Composition-based stats. Identities = 105/471 (22%), Positives = 194/471 (41%), Gaps = 21/471 (4%) Query: 100 DAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGY 159 DA+ + I + R + + +S + +G + L ++ A+ Sbjct: 59 DALDHARETSQNLVSIISSDLERNVEIYALSLQAMVDGAEH-HLSADLPPDLQRAVLFDR 117 Query: 160 LLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHR 219 A + A V G +++Q + + + +F+ H + N Sbjct: 118 ATTAA-----YLGGAYVVGAKGEVIASQSGEI-----SPTVRFTDRDYFVVH--QRNPAV 165 Query: 220 AVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGE 278 + + + + ++ + D N + GV ++I + Q+ L + I G Sbjct: 166 GLYLSHPFRSRLRDGKLSIGLTRRINDENGGFAGVALLAIRIEYFQRLL-DRISVGQHGS 224 Query: 279 YQLYDSKLRFLTS--SNPDHPTGNIFDPRELALLA--QAMEHDTRGGIRMDSRYVSWERL 334 + + +P +I +A + + R + R ++ + Sbjct: 225 VFIAMDDGTLIARKPYSPRDIGASIAGSPTFLRMAAQRDGSYVARSAVDGVQRMFTFVHV 284 Query: 335 DHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSL 394 ++ V + V + ++ + L F T+ +I +++ + + Q++L Sbjct: 285 PGT-PLIAAVAPAVDDVLSPWRHRAMIVGALTLAFGTVFVIVSWLLAFALRDKLRAQAAL 343 Query: 395 QWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDR 454 A D LT L NR L + + + P S + +D+DHFK ND +GH +GD Sbjct: 344 MRLAATDPLTGLSNRRVLDNRLDEEWRRARRTGQPLSALFIDIDHFKRFNDTYGHASGDD 403 Query: 455 VLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 LS A ISS++ RA D+ R GGEEF VILP S AA VAE+IR + +++L Sbjct: 404 ALSAVAECISSTVRRAVDLVARYGGEEFAVILPDTSADGAAAVAEKIRRNVQAQDILHGG 463 Query: 514 STTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 ++ ++ S+G ++ + L + ADR+LYLAK AGRNRV +A Sbjct: 464 DGSVAVTVSVGCATMVPAQGANALDLLAAADRQLYLAKAAGRNRVSCGRSA 514 >UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXK3_DESAC Length = 475 Score = 330 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 111/491 (22%), Positives = 193/491 (39%), Gaps = 30/491 (6%) Query: 80 FLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNL 139 FL + + + +++ + A+ E + ++ R GV V NL Sbjct: 9 FLSIILTMSFIGSNIYSAHKVAIREAYADTTGLVRFLAMDIERM--FYGVEQMFVGLDNL 66 Query: 140 LSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRY 199 L +++ N I L LRL N+S +++ + ++ Y Sbjct: 67 LINNDKTHLNGINDVL-----LRLKTNNSYLMDLLIVAPSGEIVNWSRSEAPPDITERDY 121 Query: 200 YGY----VTQPWFIGHSQRENRHRAVRWFTSQPEHASN--TEPQVTVSVPVDSNNYWYGV 253 Y +FIG + ++ RWF + + + + +D ++ + Sbjct: 122 LRYHLDHKNSAFFIGK-PQLSKVHNQRWFFGFSKAERDQYGRLKRILVAIIDIDHLYGRY 180 Query: 254 LGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQA 313 + +P + + DG + N T + + ++ + A Sbjct: 181 RELDLPEDMIITI------SSEDGTIYTRIPGHEQVVGQNFPGGTKLLCNLKKSKIFHGA 234 Query: 314 MEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTML 373 I + + S ER+ ++ V + D+ S+ + + +L Sbjct: 235 ------SPINGERLFASLERVGDT-SMIAAVSINEDNFFADWRRHSLLMGGFGLVVGAIL 287 Query: 374 LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 + R + +Q LQ QA D LT + NR E+A K Q P SV+ Sbjct: 288 FTLSILTVRSQQEQFRIQQQLQQQATTDPLTGIANRRYALEQAALEIKRNQRTGTPLSVV 347 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEA 493 +D+DHFK +ND +GH GD+VL A S R D+ R GGEEF ++LP +L A Sbjct: 348 MMDIDHFKKVNDTYGHHVGDQVLMEVAQTCRSHCRESDLVSRFGGEEFLILLPSTNLNGA 407 Query: 494 AEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 AE+IR + + A+ + ++AS GVS + G+ +++ S AD LY AK Sbjct: 408 QTHAEKIRQAIEDLSFPTAEGN-VSVTASFGVSQWQ--GETKIDRVVSRADAALYQAKHD 464 Query: 554 GRNRVFASDNA 564 GRN V +NA Sbjct: 465 GRNCVRRQNNA 475 >UniRef50_Q2P5U8 Response regulator n=12 Tax=Xanthomonas RepID=Q2P5U8_XANOM Length = 502 Score = 327 bits (839), Expect = 6e-88, Method: Composition-based stats. Identities = 105/482 (21%), Positives = 194/482 (40%), Gaps = 28/482 (5%) Query: 84 GMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRE 143 G + T+LR A + + + + TL + +DA++S L+SR Sbjct: 38 GSEYWSIHEERATALRSAQAQSLNLANS----LAQHASDTLSI---ADAVLSG--LVSRV 88 Query: 144 NESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYV 203 + + +L+ A S + +Y + + S+ + R + Sbjct: 89 EHDKRSSAARSAMHEFLVSEARRSDRLHGIFIYAADGSWVSSSL------DSTPRTHNNA 142 Query: 204 TQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVD-SNNYWYGVLGMSIPVRT 262 + +F H + A+ + S+ +T+S V+ + + GV+ +++ ++ Sbjct: 143 DRAYFKYHRDHRD---AMSLVGPPVQSRSDGSWVITLSRRVNTPSGEFAGVVLVTLQLKY 199 Query: 263 MQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDH-PTGNIFDPRELALLAQAMEHDT--- 318 Q + + + G + + L G+ + + +A +H T Sbjct: 200 FQNYY-STFEVGPHGTIGMTNDDGIVLVRRPDKQGVIGSSIAGTSIYVTVRARKHGTATY 258 Query: 319 RGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWY 378 R I R + + + V + ++ + ++ AL +LL Sbjct: 259 RSPIDGVERISGFAPARPY-PLTVLTGVSVDDALANWRETARQRIVVAALGCVLLLGVGI 317 Query: 379 VIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLD 438 + + M+ ++ L +AW D LT + NR A ++ + + P SV+ +D+D Sbjct: 318 WLDLQLRRMHRNEAQLSTEAWVDALTGIANRRAFDDRLSRALQDAIRLEAPLSVLMIDVD 377 Query: 439 HFKAINDRFGHQAGDRVLSHAAGLISSSLRAQ-DVAGRVGGEEFCVILPGASLTEAAEVA 497 HFK ND +GH GD L AG I++ R DVA R GGEEF +ILP A +A Sbjct: 378 HFKLYNDTYGHVNGDACLRVIAGTIAACSRRSEDVAARYGGEEFGMILPHTDAAGALRLA 437 Query: 498 ERIRLKLNEKEMLIAKSTT-IRISASLGVSSSEET-GDYDFEQLQSLADRRLYLAKQAGR 555 + +R + E ++ S T ++ S+GV++ E + AD LY AKQ GR Sbjct: 438 DAVRNAVAELGLMHLSSPTSAHVTVSIGVATFEPGEAPLSPNAIVHDADSALYRAKQKGR 497 Query: 556 NR 557 NR Sbjct: 498 NR 499 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 327 bits (838), Expect = 8e-88, Method: Composition-based stats. Identities = 113/510 (22%), Positives = 188/510 (36%), Gaps = 50/510 (9%) Query: 80 FLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNL 139 FL + REAL L + FE D + PV G D V + + Sbjct: 562 FLSDKRREALRTILSQVMEQAGPVRFEGEHDGRRFH-----ASAYPVTGP-DGAVEQMAV 615 Query: 140 LSRE-------NESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQ----- 187 +R+ +L +V + + + +V+ F + Sbjct: 616 FARDVTEQRKAQAALKRSEQRFRDVSAAVGEYIWETDGRDTFTFVTEDVFSILGYTQEEM 675 Query: 188 ----PTLFTRNVPTRYYGYVTQPWFIGHSQ--------RENRHRAVRWFTSQPEHASN-T 234 P LF T + + S RA+ +S H + Sbjct: 676 LGQTPALFVAREHTEDFLRWRADLYRLQSPFSKVELRCLTRDGRAIWLQSSGVPHFDDEG 735 Query: 235 EPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAID----KNLDGEYQLYDSKLRFLT 290 + +D + + R ++ +A D ++ G ++ L Sbjct: 736 GFRGYRGADMDITDRKDAENAIKASERKLRALAESAYDAIVMIDMHGNASFWNRAAERLF 795 Query: 291 SSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEG 350 + G P + + + G+R + DG V +E Sbjct: 796 GYTEEEVMGR---PIHELITPPELRDEAMAGMR--------QFAGSGDGDAVGAIQETEA 844 Query: 351 VRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRG 410 +R D +S+ ++ F R ++ ++ L A D+LT L+NR Sbjct: 845 LRKDGTRVSVERSVSS--FQLGGRWYAVATIRDITERKATEARLHELATTDSLTGLFNRR 902 Query: 411 ALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQ 470 E A + +Q +++ +D+DHFK +ND GH GD VL A + ++LR Sbjct: 903 RFMELAEREFMRTKRYQGALTMLMMDIDHFKRVNDTHGHGVGDEVLRELARISRTALREL 962 Query: 471 DVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEE 530 D+ GR+GGEEF V+LP A EVA+R+R + + M T+RI+ S+G ++S Sbjct: 963 DILGRLGGEEFGVLLPETDAGPAMEVAQRLRRAIEKASMATDAG-TLRITVSIGAATSNN 1021 Query: 531 TGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + E L AD LY AKQ+GRN+V A Sbjct: 1022 DAE-TVETLLKRADVALYEAKQSGRNKVVA 1050 >UniRef50_A4JS57 Diguanylate cyclase n=3 Tax=Burkholderia vietnamiensis G4 RepID=A4JS57_BURVG Length = 513 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 115/479 (24%), Positives = 194/479 (40%), Gaps = 21/479 (4%) Query: 92 PLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEI 151 + + DA +H + +E + R++ + +S + ++G R SL ++ Sbjct: 42 AMLLEAREDAYDGEVRHARQLVTALERDILRSIELYELSLSAAAQGATDPRVM-SLPVDL 100 Query: 152 TAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGH 211 + ++ + + G + + P + P+F H Sbjct: 101 RDPVLFDRA-----AAAKYLGPISVLDANGKLLVNSS-----SAPANRVDWSELPFFRTH 150 Query: 212 SQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVD-SNNYWYGVLGMSIPVRTMQQFLRNA 270 +R + + P E + +S ++ N GV+ + + L + Sbjct: 151 QERID--SGLYISLPYPSEFPPHEKVIALSRRINGPNGSLAGVVVGRLSIDYF-NHLFDG 207 Query: 271 IDKNLDGEYQLYDSKLRFLTS--SNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDS-- 326 + D + + +T N D ++ L+ L + G R+D Sbjct: 208 LAVGRDETIFIMATNGTLITRLPYNGDVVGKSLQGSAVLSGLLRRPSDAVSGISRIDGVH 267 Query: 327 RYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSN 386 R + RL ++ V E V + + + LT ALF+ ++ ++ R + Sbjct: 268 RLYVYRRLPGL-PFVIAVGPAWELVFAGWRTRAEWLTGFMALFSVVIWAGALLLARELRR 326 Query: 387 MYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDR 446 + LQ A D LT L NRGA E R S++ +D+D FK+ ND Sbjct: 327 RQRAECDLQRLARRDALTGLENRGAFDETLRQEWANTLRTGRHLSLLFIDIDQFKSYNDH 386 Query: 447 FGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLN 505 +GHQ+GDR L A IS+ + R D R GGEEF VILP + AA VAE IR ++ Sbjct: 387 YGHQSGDRALKAVAHCISACVSRPSDHVARYGGEEFVVILPETDVEGAAAVAEEIRQAIH 446 Query: 506 EKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 + + KS ++AS+GVSSS +D + L +AD +Y AK GRNRV + A Sbjct: 447 DMHVAHVKSRFNYVTASIGVSSSAHPAVHDGDALIRVADLAVYEAKSQGRNRVCIAAEA 505 >UniRef50_B2UHP5 Diguanylate cyclase n=10 Tax=Ralstonia RepID=B2UHP5_RALPJ Length = 505 Score = 320 bits (820), Expect = 9e-86, Method: Composition-based stats. Identities = 110/489 (22%), Positives = 192/489 (39%), Gaps = 36/489 (7%) Query: 79 IFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGN 138 + L +AL D + + + R+ + + L ++GV D + Sbjct: 34 LSLWEMRSDALARARDAADNLALILQRDIARNIEVYDLSLQ----AVIDGVRDPAMLALP 89 Query: 139 LLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTR 198 R+ D A ++G LL + + + +VP R Sbjct: 90 PAVRQLVLFDRSTNAQ-DLGSLLVTDKAGDVV-------------------IDSHSVPPR 129 Query: 199 YYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVD-SNNYWYGVLGMS 257 + + +F H ++ + A+ E + +S ++ + + G++ + Sbjct: 130 HIYLGDRDYFQVHQASDDV--GLYISEPFMPRATGLERSLGLSRRLNGPHGEFNGIVVGT 187 Query: 258 IPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDH--PTGNIFDPREL--ALLAQA 313 + + ++ L + I+ L + L + N+ D LLA Sbjct: 188 LRLNYFRR-LFDGINLGPHATVTLIRTDGTLLMRRPYNEKLIGRNLADATAFQKRLLAPE 246 Query: 314 MEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTML 373 + GI R S+ + ++V V +E + ++ + ++ + + + Sbjct: 247 GSYVDIAGIDDIERLFSFRHIGD-HPLIVTVGLATEDIYAEWWRRAWVISGIVLMLDAVF 305 Query: 374 LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 ++ ++ + + ++ L A D+LT L R AL + H P +V+ Sbjct: 306 IVLSFLFAQQLRKRLEMEQQLHLLANTDSLTGLGTRRALDSALDVEWRRANRHHTPMAVL 365 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTE 492 +D+D FK NDR+GH AGD L A I+ S+ R D AGR GGEEFC +LP L Sbjct: 366 MIDVDDFKPYNDRYGHAAGDTALRTVARCINDSIKRPGDFAGRYGGEEFCAVLPNTDLGG 425 Query: 493 AAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSE--ETGDYDFEQLQSLADRRLYLA 550 AA VAE IR + A S +++ S+GV+ D E L LAD RLY A Sbjct: 426 AARVAESIRAAVLAANERNAGSAYGKLTVSIGVAVHSGIAAEDDTLEDLVRLADGRLYEA 485 Query: 551 KQAGRNRVF 559 K AGRN V Sbjct: 486 KAAGRNVVM 494 >UniRef50_Q4KF29 GGDEF domain protein n=2 Tax=Pseudomonas fluorescens RepID=Q4KF29_PSEF5 Length = 523 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 103/483 (21%), Positives = 178/483 (36%), Gaps = 29/483 (6%) Query: 88 ALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESL 147 L L+ + D + + E + I T +A + +L Sbjct: 39 LLYLQLEQSWRHD-LMQAEVNSTNLTRAIAQQAEDTFM-----EADLVLMSLSEWIQALG 92 Query: 148 DNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPW 207 D G R + + +Y + VS+ N + + Sbjct: 93 DGPEQQPRLQGIFARRVQALTQLSGVFLYDRDGQWVVSSFGDSPHGN------DVADRDY 146 Query: 208 FIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQF 266 F H Q + + + +N E + +S + DS + GVL I + QF Sbjct: 147 FRFHQQNASL---LAHISPAIRSRANGEWIIPISRRLNDSQGNFQGVLMAGIKLAYFDQF 203 Query: 267 LRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGG----- 321 + + + G L S + + R E T Sbjct: 204 F-TSFNIDEQGAMFLALSDGTLIARRPFEERQIGASLARGEIFSKYLPEATTGNAMITSI 262 Query: 322 IRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIR 381 + +R + +L + V+ ++ ++G + S + ++ + + L W ++ Sbjct: 263 VDGVTRLYGYRQLQAYPLVVAAANSKDSVLKGWYASAYQSTAIVALVLLGVGLFGWVFVQ 322 Query: 382 ------RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQV 435 R+ +++ Q +L+ A HD+LT L NR + P S++ V Sbjct: 323 QVRNNERIEADLREAQEALEVIATHDSLTGLANRRLFERALTVEFGRGARQRSPLSLVMV 382 Query: 436 DLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAA 494 D+D+FK ND +GH AGD L+ A + R D+A R GGEEF V+LP + A Sbjct: 383 DIDYFKRYNDTYGHVAGDHCLTEVAQALKGCCQRKADLAVRYGGEEFAVLLPDTDIHGAL 442 Query: 495 EVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAG 554 +AE+IR + ++ + + S ++ SLG + TG E AD LY AK G Sbjct: 443 AMAEQIRRSVMQRNIAHSGSPVGCVTVSLGCYAFVPTGRDSIEMFIERADAALYQAKATG 502 Query: 555 RNR 557 RNR Sbjct: 503 RNR 505 >UniRef50_D1TF13 Response regulator receiver protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TF13_9BURK Length = 531 Score = 320 bits (819), Expect = 1e-85, Method: Composition-based stats. Identities = 98/499 (19%), Positives = 190/499 (38%), Gaps = 36/499 (7%) Query: 71 LQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVS 130 L ++ + + G RE L + ++ + R+ + + L V+ Sbjct: 43 LAMSILTAVEVGEGRREMLEHARQTSQNLVSIISADLARNVEIYSLSLQS----MVDAAR 98 Query: 131 DALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTL 190 + + +R+ D TAA + A V G Sbjct: 99 NPDTWTLPVPARQAMLFDRATTAA---------------FLGGAYVVGPDG----EVAAA 139 Query: 191 FTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVD-SNNY 249 + T + + +F Q+ N + + +P + ++ +D + Sbjct: 140 QYDDANTTVH-LDDREYF--QVQQRNPAAGLYFSHPFMSRLRGAKPSIALTRRIDDAQGN 196 Query: 250 WYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELAL 309 + G+ ++I + Q L ++ID G + + L D + Sbjct: 197 FAGIALLAIRIEYFQHLL-DSIDTGEQGSVFIGMADGTLLAHKPVDGRDIGGSVAKSPTF 255 Query: 310 LAQAMEHD----TRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLL 365 L + + R ++ + ++V + + V + S L Sbjct: 256 LPMTAHDSGSYVSVSPVDGVRRIFTYAHVPGT-PLIVAIAPAVDDVLAPWQRRSHVAAAL 314 Query: 366 WALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQT 425 F + ++ +++ + + Q++L A D LT L NR L ++ + Sbjct: 315 TIAFGAVFVVVSWLLAFALRDKQRAQAALLRLASTDPLTGLSNRRVLDKRLDDEWMRARR 374 Query: 426 HQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQ-DVAGRVGGEEFCVI 484 P SV+ +D+DHFK ND +GH++GD VL A I+S R D+ R GGEEF V+ Sbjct: 375 DNRPLSVLFIDIDHFKRFNDTYGHESGDEVLVAVADCIASVARRSVDLVARYGGEEFAVV 434 Query: 485 LPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDY--DFEQLQSL 542 LP + A VAE+IR K+ + ++ ++ S+G +++ + + +L + Sbjct: 435 LPDTTAQGAFAVAEQIRRKVESRVIVRGHEAPQAVTVSVGCATARPSTADFANGLELLAA 494 Query: 543 ADRRLYLAKQAGRNRVFAS 561 AD +LY+AK GRNR ++ Sbjct: 495 ADAQLYVAKNEGRNRTRSA 513 >UniRef50_Q48MB2 GGDEF domain protein n=14 Tax=Pseudomonas RepID=Q48MB2_PSE14 Length = 509 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 89/479 (18%), Positives = 169/479 (35%), Gaps = 25/479 (5%) Query: 89 LVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLD 148 +VA L DA + I+ + + S + + + L Sbjct: 35 IVASLLARERDDAAQTAARAAANIVQLIDADVMHNAELYDSSLQGMISAW-QRPDLQDLS 93 Query: 149 NEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWF 208 E+ + + +S + + ++ + + R + + +F Sbjct: 94 PELRQLVLFDR----STAASYKGDLVLLDNKGAILADSLSVI------PRNDNFSDRSYF 143 Query: 209 IGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVD-SNNYWYGVLGMSIPVRTMQQFL 267 H + + + + ++ S + N + G++ ++ + + L Sbjct: 144 KDH--KADPSLGLHVSAPYKSRWGYKDWCISFSRRMSGPNGEFTGMVSAAMRLVYFKH-L 200 Query: 268 RNAIDKNLDGEYQLYDSKLRFLTSSNP----DHPTGNIFDPRELALLAQAMEHDTRGGIR 323 + + + L ++ + D + + Q + Sbjct: 201 FMSQNLGVGSSINLINTAGILIVRYPDLEGEDLIGKDYSHSPNFQRILQEGDGSFAAMST 260 Query: 324 --MDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIR 381 R ++ R+ + ++V + + V + + + ++ +L +++ Sbjct: 261 QLNARRLYTFSRVGNL-PLVVVIGQSEDEVYAVWRRNAWLVGSATSVLCLGILWLTWLLC 319 Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 R + + + +L A D LT L NR L E Q S++ +D+DHFK Sbjct: 320 RELRRRHRAEDALASLAATDGLTGLDNRRQLDEAMETEWARAQRSGKQLSLLMIDVDHFK 379 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERI 500 A N+R GHQ GD L A IS ++ R D R GGEEF V+LP L A +AE+I Sbjct: 380 AFNERHGHQGGDEALRLIAQTISFNIRRPGDRVARYGGEEFVVVLPETELPGAMMIAEKI 439 Query: 501 RLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 R + I + S+GV S E +AD+ LY AK GRNRV Sbjct: 440 RKAAESLPLFPDAQQPI--TVSIGVVSEMVRQGDKLEAFFGIADKALYQAKHKGRNRVE 496 >UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0ZGP9_NODSP Length = 1613 Score = 317 bits (813), Expect = 7e-85, Method: Composition-based stats. Identities = 103/524 (19%), Positives = 191/524 (36%), Gaps = 34/524 (6%) Query: 53 ISSQRNHLENVANALD-KHLQYNVDKLIFLRNGMREA-LVAPLDFTSLRDAVTEFEQHRD 110 I S L++ +N + L ++ +L+ ++ ++ + + S D + F RD Sbjct: 1110 IVSATPMLDDQSNFMGITGLLTDITELVTVQEALKSSQIQLTSVLNSSLDGIMAFRAVRD 1169 Query: 111 EH----AWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHN 166 + ++ L+ + G S + LL + + + Sbjct: 1170 DQGIIIDFEWLLSNPAACQMVGRSSEQLIGKRLLVE-----MPGNRKEGLFDEYVNVVES 1224 Query: 167 SSSMVEQAMYVSRA-GFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFT 225 + Y + + Q+ N+ R Sbjct: 1225 EKPYKREFYYNHDGIESWFENIAVKLEDGFAVTFRDITAIRQSEQAIQQVNQQLQERVA- 1283 Query: 226 SQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQL--YD 283 + + +S + +++ L ++ + L+ + Sbjct: 1284 ---DLDQRHAEMLILS---EISDFLQASLTVAEACNALCSLLQPLFPDCSGAVFITNSSR 1337 Query: 284 SKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDG--VL 341 +++ ++S + F P++ L + H + + S R H + Sbjct: 1338 NRVEMVSSWGDSLQSAPDFHPQDCWALRRGRLHT-------CNHHQSGLRCQHIPADEAI 1390 Query: 342 VRVHTLSEGVRGD-FGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQ--SSLQWQA 398 + +G+ G ++ AL L I+ V ++ + L +LQ+Q+ Sbjct: 1391 ATTLCIPMIAQGETLGLFYLSTNNSTALPDAKLQIARTVAEQVALAIANLNLRETLQYQS 1450 Query: 399 WHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSH 458 D LT LYNR L E Q QHP SV+ +D+D+FK ND +GH GD VL Sbjct: 1451 IRDPLTGLYNRRYLEEVLTQEIARGQRRQHPISVVMIDVDYFKRFNDTYGHDVGDYVLQT 1510 Query: 459 AAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIR 518 ++ ++R D+A R GGEE +ILP +SL E AE IR + + + + Sbjct: 1511 IGAMLKETVRGSDIACRYGGEEMTLILPESSLEETTIKAEEIREAIAQLTLAYNGQHLGK 1570 Query: 519 ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 ++ SLG++ + G L AD LY AK AGRN+V + Sbjct: 1571 LTISLGIAGFPKHGTTGI-ALIQAADAALYRAKAAGRNQVVVAP 1613 >UniRef50_C0QM24 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM24_DESAH Length = 488 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 94/398 (23%), Positives = 163/398 (40%), Gaps = 26/398 (6%) Query: 173 QAMYVSRAGFYVSTQPTLFTRNV----PTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQP 228 + Y + + F+VS + + + Q +F + P Sbjct: 97 KVKYNTFSSFFVSDNTKQYYYSKGILKTVERQEFRDQWYFRIKDLDTD-----YEINLDP 151 Query: 229 EHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLR 287 + A+ + ++ V D + + G G+ + + +++ + N + + D + Sbjct: 152 DMANQDTMTIFINHKVYDYDGNYIGATGVGLAIHAVKK-MVNTYQERYNRTIFFTDKEGN 210 Query: 288 F-LTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSR----YVSWERLDHFDGVLV 342 L N P NIF+ +E+A Q + + + YV+ + F L Sbjct: 211 ITLHGQNFSKPVKNIFEVKEIAEHRQEIHAGSPLSFQYKKDNKNIYVNNRYIPEFGWYLF 270 Query: 343 RVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDT 402 + + ++ + L + + +L+++ I Q L A D Sbjct: 271 VEQCGDKAIAKVRNTLVLNLVFSFGIIGLILIVTNLTIASF-------QKRLTKMASTDK 323 Query: 403 LTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGL 462 LT +YNR A K Q Q P S+I DLDHFK +ND +GH AGD ++ G Sbjct: 324 LTGVYNRRAFDIIIDQTLKEIQRKQTPLSIILFDLDHFKRVNDTYGHLAGDYIIQTTVGT 383 Query: 463 ISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISAS 522 + ++R D+ R GGEEF ++L G L +A + AE+IR + + I ++ S Sbjct: 384 AARTIRNSDILCRWGGEEFLILLKGCDLGDAMKTAEKIRTAVASQPARYGDDQ-ICVTIS 442 Query: 523 LGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 +GV+ TG E L AD+ LYLAK +G+NR Sbjct: 443 VGVTE--HTGQDTKETLLKRADKALYLAKASGKNRCET 478 >UniRef50_A4G5V3 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G5V3_HERAR Length = 519 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 107/489 (21%), Positives = 190/489 (38%), Gaps = 36/489 (7%) Query: 97 SLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALE 156 + + + E E A + + T V G+ + LVS +L R++ N + Sbjct: 42 ARAEKIRETETATSNMAKALAQHAEDT--VGGIDNLLVSMEEMLERDS---WNPLQLERM 96 Query: 157 VGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQREN 216 +L + + + +Y + ++Q TL T + +FI H + Sbjct: 97 NQFLRQRVTDLPLLHGLFVYDEHGQWVANSQETLRTD------LNNADREYFIFHRTHTD 150 Query: 217 RHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNL 275 + S + +TVS + ++ + GV+ +I ++ + ++ D Sbjct: 151 SGPHL---GPPIRSRSTGDWIITVSRRLEHADGNFAGVVLATINMQYFSAYYKD-FDIGK 206 Query: 276 DGEYQLYDSKLRFLTSSNPDH--PTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWER 333 G L L D G+I + + T R Sbjct: 207 AGAIVLTTDSGTLLVRRPFDEAVIGGDISNGPVYQFYKRQGSSGTAILTANIDRTERIYS 266 Query: 334 LDHFD--GVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQ 391 H D +L+ V ++ V + + ++ A+ +L + + ++ Q Sbjct: 267 YRHLDRYPLLIAVAQSTDEVLESWRNSTMRFAFFSAMVLLLLWLLGARLVHQITVRERAQ 326 Query: 392 SSLQWQ--------------AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDL 437 S L+ A D+LT L NR +Q ++I +D+ Sbjct: 327 SELRTARDDLERSNGELAALALLDSLTGLANRRRFDAALDDEFARAMRNQTSLALIMLDV 386 Query: 438 DHFKAINDRFGHQAGDRVLSHAAGLIS-SSLRAQDVAGRVGGEEFCVILPGASLTEAAEV 496 DHFK NDR+GH GD L + ++ ++ R D+ R GGEEF ++LPG AA V Sbjct: 387 DHFKKYNDRYGHPQGDECLKEISKILKTATARTGDLVARYGGEEFVILLPGTDRAGAAAV 446 Query: 497 AERIRLKLNEKEMLIAKSTTIRISASLGVSSS-EETGDYDFEQLQSLADRRLYLAKQAGR 555 AER+RL + M A++ ++ASLG+++ + +QL AD+ LY AK+ GR Sbjct: 447 AERVRLAIQALNMEHAETPDGIVTASLGIAALIPQRQQNSPQQLVHAADQALYKAKEDGR 506 Query: 556 NRVFASDNA 564 N+ S A Sbjct: 507 NQSCISTQA 515 >UniRef50_Q0EXC8 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXC8_9PROT Length = 615 Score = 310 bits (795), Expect = 9e-83, Method: Composition-based stats. Identities = 105/431 (24%), Positives = 173/431 (40%), Gaps = 34/431 (7%) Query: 143 ENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGY 202 E + +D+ +LE+G++ S + ++ V ++ Sbjct: 210 ELDLVDHTANTSLELGHIFGYTSQESEWSFKL--------FLEHVLPEDRSEVSRLFHEA 261 Query: 203 VTQ--PWFIGHSQRENRHRAVRWFTSQPEH--ASNTEPQVTVSVPVDSNNYWYGVLGMSI 258 + + W R +RW T + H S Q + + D V + Sbjct: 262 IARQTDWHCECRIRRTDG-ELRWITVRGRHWHDSEGVVQRMIGIVQDITERKLAVQAVIA 320 Query: 259 PVRTMQQFLRNAID----KNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAM 314 R + + + D + G Y +R L P G P EL A+A Sbjct: 321 SERRFRNLVESLSDWVWEVDEQGRYIYCSPNVRDLLGYEPAELIGK--SPLELMPAAEAA 378 Query: 315 EHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLL 374 G + R + ++ + D + + + + Sbjct: 379 RVAEIFGTALSERSHLKDLVNI-------------NLHKDGHEVVMETSGAPVVDADGTF 425 Query: 375 ISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQ 434 + I R +++ L+ L+ QA D LT L NR FE A + H + FS++ Sbjct: 426 RGYRGIDRDITDRKELERELESQARTDVLTGLNNRRYFFELAELELARAKRHGNQFSLLM 485 Query: 435 VDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAA 494 +D+DHFK ND +GH GDRVL + + +LR D++GR+GGEEF ++LP A Sbjct: 486 LDVDHFKLFNDSYGHHIGDRVLQKLSEVCMHTLREIDLSGRIGGEEFAIMLPETRGDRAM 545 Query: 495 EVAERIRLKLNEKEMLIAKSTT-IRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 EVAER+RL + +L+ + +T + + S+GV+S G + L AD LY AK A Sbjct: 546 EVAERLRLAIAGAPVLLEQQSTFVHFTVSIGVTSLVAAGRQ-VDDLLKRADDALYAAKNA 604 Query: 554 GRNRVFASDNA 564 GRN+V D + Sbjct: 605 GRNQVCKKDES 615 >UniRef50_A4VQQ9 GGDEF domain protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VQQ9_PSEU5 Length = 466 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 102/442 (23%), Positives = 174/442 (39%), Gaps = 28/442 (6%) Query: 134 VSEGNLLSRENESLDNEITAALEVG-YLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFT 192 +S L+ + ++ ++ G ++ + Q + R G V + Sbjct: 36 LSTIRLMDIVLLDMREDVLEHMDFGRHVDEELKAYGGFIAQLAVIDRDGRLVFSNLGPSG 95 Query: 193 RNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYG 252 ++V + F H R++ + + + + + + P+ N + G Sbjct: 96 KHV-----DLSDREHFRVH--RDDPQEDRLFISKPVLGRVSKQWTIQFTRPIHQNGEFAG 148 Query: 253 VLGMSIPVRTMQQFLRNAIDKNLDGEYQLY--DSKLRFLTSSNPDHPTGNIFDPRELALL 310 VL +S+P + + ID +G L D +R + S F E Sbjct: 149 VLVLSVPTSFFADYYQQ-IDVGPNGSIVLLGTDRSVRAIASGTQIPGRYGRFKVPE-DKP 206 Query: 311 AQAMEHDTRGGIRMDS------RYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTL 364 E RG S R ++ RL GV+V V F LT+ Sbjct: 207 YFDPEAPQRGFYEGVSVIDGEYRLGAYRRLID-QGVVVVVLLWPTDFMAAFQERKTLLTV 265 Query: 365 LWALFTTMLLISWYVIR-------RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKAR 417 + + L + +I + ++ + + L A D LT + +R A Sbjct: 266 SAGVISLALSVVALLIFLLSSRYFQSIARLRLAHGQLAQLANTDVLTGVSSRRAFLAGLE 325 Query: 418 PLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVG 477 + H S++ +D+DHFK +ND GH GD VL + + LRA D+ GR+G Sbjct: 326 AELARARRHNESLSLLMLDIDHFKRVNDVHGHPIGDAVLKQFSETCAGMLRAHDLLGRLG 385 Query: 478 GEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFE 537 GEEF ++LP A VAE+IR + + M A I ++ S+G++ E + Sbjct: 386 GEEFAIVLPHTDAEGARCVAEKIRTAVAQTPMPTAAGD-ITVTVSIGLAQMEGLPGE-VD 443 Query: 538 QLQSLADRRLYLAKQAGRNRVF 559 QL + AD+ LY AK+ GRN+V Sbjct: 444 QLMARADQALYEAKRGGRNQVR 465 >UniRef50_Q4K7I5 GGDEF domain protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4K7I5_PSEF5 Length = 527 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 94/437 (21%), Positives = 166/437 (37%), Gaps = 39/437 (8%) Query: 150 EITAALEVGYLLRLAHNS-SSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWF 208 + + LL N S + +Y + V++ L +F Sbjct: 104 DADQLHLLKRLLSAQRNELSQLHGLFIYDQDGAWIVASNGILPPN------ANNSDSEYF 157 Query: 209 IGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVD-SNNYWYGVLGMSIPVRTMQQFL 267 I H R +R + S E + VS ++ + + GV +I + + Sbjct: 158 IYHRDRPDRGPH---VGPSIKSRSTGEWVLPVSRRINNPDGSFAGVALATIYLDHFLKLY 214 Query: 268 RNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGG------ 321 N+ID +G L S+ + + + + E L Q + G Sbjct: 215 -NSIDIGNNGVINLISSEAKIVLRRPFNEAVIGT-NVAEGPLFTQLLPKGPFGTATVTSY 272 Query: 322 IRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIR 381 + R V + R++ + ++ E + ++ +++ L T + I + I Sbjct: 273 LDGVERVVGYRRVNDYPLIVFSAVNKEEVLASWRQETVMSTAIVFLLMTVLGGIGYRFI- 331 Query: 382 RMVSNMYVLQSSLQWQAWHDTL----------------TRLYNRGALFEKARPLAKLCQT 425 R++ +Q+ L D L T L NR + + Sbjct: 332 RLMKKQGRIQNEL--LGAQDKLMEVNRTLELLALEDALTGLANRRQFDLFTQTEMGRAKR 389 Query: 426 HQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVI 484 Q +++ +D+DHFK NDR+GH GD L + +I ++ R D+A R GGEEF V+ Sbjct: 390 GQRTLALLMIDVDHFKRFNDRYGHLVGDECLRRISAIIRENIRRPGDLAARFGGEEFAVV 449 Query: 485 LPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLAD 544 LP A VAE+IR + E+ S ++ S+GV + + + + L AD Sbjct: 450 LPATDYVGAFIVAEKIRKAVLRAEIEHKDSGIELVTVSIGVGACSPSVEDTLDGLIGAAD 509 Query: 545 RRLYLAKQAGRNRVFAS 561 LY+AK +GRN + Sbjct: 510 EALYVAKTSGRNMSVIA 526 >UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YI13_9CYAN Length = 1006 Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats. Identities = 103/509 (20%), Positives = 184/509 (36%), Gaps = 31/509 (6%) Query: 64 ANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEH----AWKIELN 119 A ++++ + VD L+N L+ S D + F+ RDE ++ L+ Sbjct: 517 AISVNRDITETVDIQEKLKN---SQLLLSGVLNSSIDGIMAFKSVRDETGKIIDFEWLLS 573 Query: 120 RRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSR 179 + G + + LL +++ + Y Sbjct: 574 NPSGCELVGRHENELLGKRLLEE-----LPGNYEVGLFDRYIQVVETGEPQEREFYYEHD 628 Query: 180 A-GFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQV 238 + + ++ N A R + + + Sbjct: 629 GIKSWFVNIAVKLEDGFTVTFRNISRTKESELQLKQLNDELADRL----NQLQQRNQEIL 684 Query: 239 TVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSK--LRFLTSSNPDH 296 +S N++ + +T + ++ G + S+ + + + Sbjct: 685 LLSQ---MNDFLQACFTLEEAYKTFRTLIKPLFPGCSGGIFITKASRDFVEAVATWGNLP 741 Query: 297 PTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGD-F 355 +F P++ L + EH ++ L +G+ Sbjct: 742 IGETVFHPKDCWCLRRGREHWVDT-----DQFDLLCNHSDQTLPPKVSLCLPMMAQGETL 796 Query: 356 GSISIALTLLWALFTTMLLISWYVIRRMVSNMY--VLQSSLQWQAWHDTLTRLYNRGALF 413 G + + L + ++ V +M + L+ LQ ++ D LT L+NR L Sbjct: 797 GLLYLYSDSPDQLCESKRQLARTVAEQMALAIANLQLREELQNRSIRDPLTGLFNRRYLE 856 Query: 414 EKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVA 473 E + H VI +D+DHFK ND FGH GD VL L+ SSLRA D+A Sbjct: 857 ESLEREINRACRNDHNVGVIMIDIDHFKRFNDTFGHDGGDAVLKEVGKLLKSSLRASDIA 916 Query: 474 GRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGD 533 R GGEE +ILP AS+ + AE++R + + + + + I+ASLGV+ E G Sbjct: 917 CRYGGEEMTLILPEASIENTYKRAEQVRKLIKQINIEHKRQSLGTITASLGVACFPEHG- 975 Query: 534 YDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + + AD LY AK+ GR+RV ++ Sbjct: 976 MTGDAVVQRADTALYQAKKEGRDRVVGAE 1004 >UniRef50_B5SA27 Signal transduction protein ggdef domain n=4 Tax=Ralstonia solanacearum RepID=B5SA27_RALSO Length = 507 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 110/506 (21%), Positives = 188/506 (37%), Gaps = 36/506 (7%) Query: 61 ENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNR 120 + AL L + + L +AL D + + E + R+ + + + Sbjct: 11 RLIGAALLFSLTVSAGAALSLYEMRLDALKCAKDAGANIALIIERDVARNLELYSLSV-- 68 Query: 121 RRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRA 180 + ++D V + + R D I A ++G +L Sbjct: 69 --EAVLERLADPEVHQVSNHIRRLVLFDG-IAQARDLGSILVTDTQ-------------- 111 Query: 181 GFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV 240 + TL ++ P R + +F ++ ++ + E + +T+ Sbjct: 112 -----GRVTLDSKADPARDIYIGDRDYFQQQARIDSTAV---LISKPLEARTGFGASITL 163 Query: 241 SVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTG 299 S + D++ + GV+ ++ + L + + G L+ + + TG Sbjct: 164 SRRLNDAHGQFAGVIAGALRISYF-NRLFSGMTLGPKGSIALFYADGTLIARRPAPAATG 222 Query: 300 NIFDPRELALLA----QAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDF 355 L + + R ++ R+ H+ + V V +E + + Sbjct: 223 AAAPRDANVLTRVIDTTDGLYLGKSVRDGIERLYTYRRIGHY-PLYVAVGAATEDIYASW 281 Query: 356 GSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEK 415 S + A+ LL A+F + + Y + + A D LT L NR AL Sbjct: 282 TSRAWAIGLLVAVFNLVTMTLAYQFAKQLEKRLAAGRRHAELAVTDALTGLPNRRALDAG 341 Query: 416 ARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISS-SLRAQDVAG 474 K + P SV+ +D+D FK ND +GH GD L A I + + R D+A Sbjct: 342 LDREWKRALRERWPVSVLMIDVDAFKPYNDHYGHLGGDTALKAVARCIQAKACRPGDLAA 401 Query: 475 RVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSS-SEETGD 533 R GGEEFC++LP L A VAE IR + + A+ +S S+GV+S Sbjct: 402 RYGGEEFCIVLPHTDLAGAVAVAEHIRQAVLALHIPHAQGPAGILSVSIGVASGMPALAA 461 Query: 534 YDFEQLQSLADRRLYLAKQAGRNRVF 559 E L AD LY AK GRNR Sbjct: 462 DRPESLTQAADTELYRAKTQGRNRTM 487 >UniRef50_D2M3Q6 Diguanylate cyclase n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M3Q6_RHOPA Length = 502 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 105/474 (22%), Positives = 180/474 (37%), Gaps = 26/474 (5%) Query: 92 PLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEI 151 + R A Q + A I+ + R + + S V+ NLL E S+ I Sbjct: 42 SVLLDMRRGAEELARQTLENLAASIDADINRNIELYDASLRSVA-NNLLLPELRSVSPPI 100 Query: 152 TAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGH 211 + +L+ + + +Y T + + QP+F H Sbjct: 101 DRLILFDHLV----PAPHLGAIRVYDEHGDL------TRDSAVLHPAKENRSDQPFFAVH 150 Query: 212 SQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVD-SNNYWYGVLGMSIPVRTMQQFLRNA 270 R+ + + Q + + V VS ++ + GV+ SI Q + Sbjct: 151 --RDEPYFGLYISGPQQ---LDGQYSVVVSRRINGPGGQFLGVVAGSIKFGYFQDLFKRL 205 Query: 271 IDKNLDGEYQLYDSKLRFLTSSNP--DHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRY 328 + + + + + N+ + + + G +D Sbjct: 206 R-LRPNDMIAVLAQDGTLVVRNPFTQELIGKNMMFTPGVQKMFERRNGWFAGVGTVDGVQ 264 Query: 329 VSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMY 388 + D ++V V + + + + + ++ + T + R + Sbjct: 265 RMFVWSDSTKPLVVLVAKSWDDIYAMWRREATWIGIVLLVLATFVAAVTVFFLREIDRRA 324 Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 + L+ A D LT L NR + P +++ +D DHFKA NDRFG Sbjct: 325 QAERQLEELAITDPLTGLTNRRKFDAAIDTEWRRAIRQNTPIALLMIDADHFKAYNDRFG 384 Query: 449 HQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEK 507 HQAGD++L A I+ ++ RA D A R GGEEF V+LPG + + A VAE IR K+ E Sbjct: 385 HQAGDQMLVGIAVCIADTVQRAGDCAARFGGEEFAVLLPGLTASAAEAVAETIRRKVQE- 443 Query: 508 EMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 ++ S+GV+S+ + + L ADR LY AK+ GRNR + Sbjct: 444 ----WSDIEGGVTVSVGVASTTPAAAHQWHDLVEAADRALYAAKELGRNRCVVA 493 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 304 bits (778), Expect = 7e-81, Method: Composition-based stats. Identities = 101/451 (22%), Positives = 161/451 (35%), Gaps = 58/451 (12%) Query: 111 EHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSM 170 AW+ L R ++ ALV + S ++ E G + + + Sbjct: 318 NPAWQEVLGWSREELLDRPWAALVHPD-----DRASTMQDMDTLRERGVITNVENRYQCR 372 Query: 171 VEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEH 230 ++S +V Q ++ + +R ++ Sbjct: 373 DGTWRWISWNSAFVPEQGLIYGVG--------------RDVTALRRMVEELRTSEARLRA 418 Query: 231 ASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLT 290 + T P V + W V G D ++ + R + Sbjct: 419 MAATVPGVVL--------QWREVPG--------------------DRQFTYVSPRSREIL 450 Query: 291 SSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEG 350 P+ + D R L + R W F+G LV Sbjct: 451 GVPPE---WLLQDWRALPVHPADRTVWELSLRDAMERRGDWM----FEGRLVLPGGEVRW 503 Query: 351 VRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRG 410 RG+ + + L ++ + I + Q L+ A D LT L NR Sbjct: 504 WRGEARPVHGGQSGAAELPEESGIV-YCGIITDTTEHREAQERLRQLATTDGLTGLANRR 562 Query: 411 ALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQ 470 E + + + P ++I +D+D FK +ND +GH GD VL AG+ + +R Sbjct: 563 RFLEALEHEVQRHRRYGTPLALISIDVDRFKRVNDTWGHAVGDEVLRALAGICRAEVRDV 622 Query: 471 DVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEE 530 D GR+GGEEF V+LP + EA VAER+R + +L + ++ SLGVS+S Sbjct: 623 DTVGRIGGEEFAVLLPDTAPEEAMAVAERLRAGVEAAPLLTTAG-PLTVTLSLGVSASPP 681 Query: 531 TGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + L ADR LY AK GRNRV + Sbjct: 682 C--DGADTLLREADRALYRAKAGGRNRVERA 710 >UniRef50_B1KP16 Diguanylate cyclase n=6 Tax=Proteobacteria RepID=B1KP16_SHEWM Length = 485 Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 91/395 (23%), Positives = 160/395 (40%), Gaps = 23/395 (5%) Query: 176 YVSRAGFYVSTQPTLFTRNVPTRYYGYV----TQPWFIGHSQRENRHRAVRWFTSQPEHA 231 Y + F+VS + + + +F R + A Sbjct: 104 YDTVTSFFVSEKSRKYYHSTGVLKKIEDTAPNDAWYFRV---RSLPTSESYEVNIDLDTA 160 Query: 232 SNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLT 290 + T V V+ V D + GV G+ + V +Q+ ++ + + D++ Sbjct: 161 NRTRTVVYVNYKVHDFEGNFIGVTGVGLAVERVQKLIK-LYQQRYNRRVYFVDTEGHVTL 219 Query: 291 SSNPDHPTGNIFDPRELALLAQAMEHDTRGGI----RMDSRYVSWERLDHFDGVLVRVHT 346 + + + L A + + Y++ + F L+ Sbjct: 220 HGEQYSGSQTLQNSPGLEKYATRILTSPSASFSYVRDNKTVYLNSRMVSDFKWYLMVEQE 279 Query: 347 LSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRL 406 +EG + + + + L + +L+I+ + R Q L+ A D LT Sbjct: 280 EAEGEKKILNTFWVNIVLGLMVIVVILVIANLTLGRY-------QRKLEVMASTDKLTGA 332 Query: 407 YNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSS 466 NR E + + P SVI +D+D+FK++ND FGH GD V+ A +I Sbjct: 333 TNRQMFEEYFSHSLQNAEISATPVSVILLDIDYFKSVNDNFGHSIGDLVIKTVANIIRRQ 392 Query: 467 LRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVS 526 LR++D+ R GGEEF ++LP L+ AA++AERIR + E+++ + + I I+ S GV+ Sbjct: 393 LRSEDIVCRWGGEEFLLLLPNIDLSHAADMAERIRESIAERKISVNEHE-IGITVSSGVA 451 Query: 527 SSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + L + D LY AK GR++V S Sbjct: 452 QYKLGEPR--ADLINRVDVALYQAKDRGRDQVVLS 484 >UniRef50_Q04NQ1 GGDEF family protein n=7 Tax=Leptospira RepID=Q04NQ1_LEPBJ Length = 535 Score = 300 bits (768), Expect = 9e-80, Method: Composition-based stats. Identities = 110/474 (23%), Positives = 193/474 (40%), Gaps = 37/474 (7%) Query: 93 LDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEIT 152 D + V +F+ + + + + I R G ++ + + N SL EI Sbjct: 84 EDTFANPSLVKKFKNYPNINRFGIPHISRENKE--GADSGTLTAIGSVYKLNPSLLKEIE 141 Query: 153 AALEV-GYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQ---PWF 208 AAL + G L S +V A Y+S+ F + + YY P++ Sbjct: 142 AALNLRGQFESLTEKQSEVVW-AYYLSKQKFLY-----ITPKFKDENYYFTDDLYLGPYW 195 Query: 209 IGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLR 268 + + N + T + + +T+S PV N + GV + I + MQ+ L Sbjct: 196 TQATPQINPT-GRQIITDLYDDLAGKGLMITISEPVYVNEKFIGVASIDIGLDAMQRILE 254 Query: 269 NAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRY 328 + + GE L D + + S T + L ++ ME + S + Sbjct: 255 SG---DCIGESMLIDENGKIIAKSG----TFKLDTRLPLPVITMIMEPQDLFFLEKGSFW 307 Query: 329 VSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMY 388 + + D ++ + + I L W L T ++ + + Sbjct: 308 IRNKIKDEEIWLVHEIKIFEYIIY-----IIKNLLPFWVLVFTFFIVLILYV-----KLR 357 Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 + + D LT ++NR + + + H ++++ VD+DHFK +ND+FG Sbjct: 358 SSMNQVAKLIHTDPLTGIWNRRGFLKLTQRSLTIGNRHGKDWTILLVDIDHFKQVNDKFG 417 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H GD+ L A ++S S+R D R GGEEF + L G + ++AE +R ++ + Sbjct: 418 HDTGDKTLIKVAQVLSRSIRQTDAVCRWGGEEFAIFLFGVGQKASTDIAEDLRKEVEN-Q 476 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + + ++ S+GVS G D E+ AD+ LY AK +GRNRV A D Sbjct: 477 VRLDDGNP--VTLSIGVSQ----GTLDLEEAFVNADQALYRAKSSGRNRVCAFD 524 >UniRef50_A8IEV2 GGDEF n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IEV2_AZOC5 Length = 519 Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats. Identities = 78/407 (19%), Positives = 150/407 (36%), Gaps = 17/407 (4%) Query: 164 AHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRW 223 + A+ +S+ + + + +F+ H R+N + Sbjct: 111 TQRGRELEGIAITDPGGRILLSSYSDVPAD------FTVDDRDYFVVH--RDNPSAGLYV 162 Query: 224 FTSQPEHASNTEPQVTVSV-PVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLY 282 + EP + VS+ + + G++ + + + L + +G L+ Sbjct: 163 SLVLRNRFT-GEPGIMVSIGRRAPDGTFLGIMLALVRLSYLDSLL-DGGRLGPEGALSLW 220 Query: 283 DSKLRFLTS----SNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFD 338 S + + P G P LA + + + + D Sbjct: 221 RSDGALVLRNRVSGGHEDPQGRAISPTYLAQILNTHHGTFDAALPPGTPVRRHTFVHVAD 280 Query: 339 -GVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQ 397 ++V + + ++A+ L+ +L + ++ + RR + ++ L Sbjct: 281 APLIVSASIPVSEIYSRWSHRALAMVLVTSLAVSAIMALTVLFRRELLRRAEAEAQLNEL 340 Query: 398 AWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLS 457 A D LT + NR E+ + +++ +D+DHFKA ND GH GD +L Sbjct: 341 ARADGLTGIANRRRFDERLGQEWRRSYRSSGTMALLMIDVDHFKAFNDTHGHWTGDDLLI 400 Query: 458 HAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTT 516 A +S ++ R D+ R GGEEF ILP A +AERI + + Sbjct: 401 RIAATLSQTVHRPGDLIARYGGEEFAAILPDTDREGALRIAERILDAVRALRFEDSAGQV 460 Query: 517 IRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 + ++ S+G + + + LAD LY AK GRN + + + Sbjct: 461 LPVTVSIGACALSPSPGQQVADIVRLADAALYEAKDRGRNCIIMAPD 507 >UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X290_DESRD Length = 769 Score = 297 bits (760), Expect = 8e-79, Method: Composition-based stats. Identities = 110/436 (25%), Positives = 174/436 (39%), Gaps = 26/436 (5%) Query: 138 NLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPT 197 L +RE E +++ L V L ++ + ++ S + P T Sbjct: 339 TLNTREQELRESQERLNLTVNS-AGLGLWDWNLRQGTIFSSSRCSEILDFP---PYEATT 394 Query: 198 RYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMS 257 R + + RE R +R E TE Q+ + W V G Sbjct: 395 RITQWSRRIHPRD---REEVKRRLRAHLLGQEDTFETEFQIQTRDNIW---RWVWVCGRI 448 Query: 258 IPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLT---SSNP------DHPTGNIFDPRELA 308 + + LR + + + KLR LT + NP D + Sbjct: 449 VESDAQDRPLRMTGTALDIAKRKTVEEKLRTLTLAVAQNPVPILITDEVGRLEYANPAYL 508 Query: 309 LLAQAMEHDTRGGIRM--DSRYVSWERLDHFDGVLVR---VHTLSEGVRGDFGSISIALT 363 L + ++ R G+ ++ + HF VL + V + Sbjct: 509 ELTELTTNEVRAGLEAKAGPHFIDGSFIRHFHQVLFSKGHWQGELQNVTKSGRVFWEFTS 568 Query: 364 LLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLC 423 + + + +R+ V+ +S L+ A D+LT ++NR FE A + Sbjct: 569 ISPLQNEKGEVTHYVAVRKEVTAQKQAESKLRELATRDSLTGVWNRRYFFELAARELESA 628 Query: 424 QTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCV 483 Q ++HP S+I D+DHFK IND +GH GD VL L+ ++LR D+ RVGGEEF V Sbjct: 629 QRYKHPLSLILYDIDHFKRINDTYGHMIGDEVLRQLTQLVGANLRNVDLLARVGGEEFAV 688 Query: 484 ILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLA 543 +LP L +A VA RI +NE + ++++ S+G+SS D E L A Sbjct: 689 LLPHTYLEQAHTVARRILRGVNEAVIRTEAG-PLQLTISIGMSS-SAHADNCLESLIHDA 746 Query: 544 DRRLYLAKQAGRNRVF 559 D+ LY AK GRN + Sbjct: 747 DQALYAAKNKGRNSIC 762 >UniRef50_C7C7Z0 Putative diguanylate cyclase (GGDEF motif) n=1 Tax=Methylobacterium extorquens DM4 RepID=C7C7Z0_METED Length = 523 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 100/489 (20%), Positives = 179/489 (36%), Gaps = 27/489 (5%) Query: 88 ALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESL 147 A+ A + + RDA + + R++ + +S + +G ++ Sbjct: 35 AVSAFMLWDMRRDAERRTTAAAQSLVQVLSRDIARSIGMYDLSLRAIVDGW----RLPAV 90 Query: 148 DNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPW 207 N ++ R A+ + + R G + + ++ Y + + Sbjct: 91 MNADPETRQLILFDRAANAENFGH--TLVFDRTGTLI-----ISSKTPSPEPLSYADREY 143 Query: 208 FIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFL 267 F H+ + + + + + + + GV+ SI + +Q L Sbjct: 144 FQYHATHADPV--LHVSVPLVSRLTGRWVLIISRRLSNPDGSFAGVVLGSIYLDYFRQ-L 200 Query: 268 RNAIDKNLDGEYQLYDSKLRFLTSSNPDHP----TGNIFDPRELALLAQAMEHDTRGGIR 323 AID + G LY + D + + + L + + Sbjct: 201 FAAIDPDHAGTVTLYGPGGTIVMREPFDEQLVGRSVSATGSYQRMLQTRQGVFTGPAMMG 260 Query: 324 MDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRM 383 R + ++ L + +E + + ++ L + ++ + RR Sbjct: 261 EGPRTFAVAQVGELPLQL-SIALTAEDIYAAWWQKALVLAAVVLSLCATTVVLTTLFRRE 319 Query: 384 VSNMYVLQS-------SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVD 436 ++ Q LQ A D LT L NR E + P S++ +D Sbjct: 320 LTRRKAAQRATAALNAELQQLASTDALTGLSNRRRFDEVLERECRRAMRTGKPLSLLILD 379 Query: 437 LDHFKAINDRFGHQAGDRVLSHAAGLISSSLRA-QDVAGRVGGEEFCVILPGASLTEAAE 495 D+FK NDR+GHQ GD L A + S+ A D A R+GGEEF V+LP A Sbjct: 380 ADYFKGFNDRYGHQQGDAALRLIAQAMQGSIHAYSDTAYRIGGEEFAVVLPDTGEPGAVT 439 Query: 496 VAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGR 555 A RIR + + M A + ++ S GV++ + D L + AD LY AK+ GR Sbjct: 440 AANRIRQAVLAQAMPHASNPHGLVTVSCGVAAIPAGQNSDLIALVAAADAALYEAKRRGR 499 Query: 556 NRVFASDNA 564 N+V S +A Sbjct: 500 NQVRISTSA 508 >UniRef50_Q07TT8 Diguanylate cyclase n=9 Tax=Bradyrhizobiaceae RepID=Q07TT8_RHOP5 Length = 506 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 98/475 (20%), Positives = 169/475 (35%), Gaps = 26/475 (5%) Query: 92 PLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEI 151 + + A Q + A ++ + R + + S V NL E + + Sbjct: 45 SVLLDMRQSAEQLARQTMENLAATVDADVSRNIELYDQSLQAVV-KNLSVPELADVSKPL 103 Query: 152 TAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGH 211 + AH F + L + +F H Sbjct: 104 LQLILFDRAATAAH----------LGPIQVFDAEGRLRLDATTLKPVEDRRDQDDFFKIH 153 Query: 212 SQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNA 270 R++ + P H EP + +S + D + GV+ SI + + L + Sbjct: 154 --RDDPRAGLYISRPMPYH---GEPSIVLSRRLQDPKGGFAGVVAGSIRISYFRD-LFDR 207 Query: 271 IDKNLDGEYQLYDSKLRFLTSSNPD--HPTGNIFDPRELALLAQAMEHDTRGGIRMDSRY 328 + + L + + ++ + + + G D Sbjct: 208 LRLGDNDVIALLKRDGVLVMRRPFEAELIGRDLSAVPSMTQVLTSNSGWFSGKGLNDRIP 267 Query: 329 VSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMY 388 + D ++V V + + G + +I L + + + R + Sbjct: 268 RMYVWADSNRPLVVLVGRPWQSILGLWRREAIRLGSILLALAVFVAGVTIFLIREIDRRA 327 Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 + L+ + D LT L NR + Q P +++ +D D FK ND G Sbjct: 328 RAEQRLEELSVTDPLTGLTNRRKFDAAIDEEWRRAQRRGSPMALLMIDADLFKQFNDSHG 387 Query: 449 HQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEK 507 HQAGD++L A IS S+ RA D A R GGEEF V+LPG + +A VAE IR K+ Sbjct: 388 HQAGDQMLIGIAVCISDSVHRAGDCAARFGGEEFAVLLPGLAAPDALSVAESIRTKVERW 447 Query: 508 EMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + ++ S+GV+S + +L AD+ LY AK++GRN + Sbjct: 448 SLDQTG-----VTISVGVASLIPAPSVHWSELVEAADKALYAAKESGRNACVVAP 497 >UniRef50_B6JAZ4 Diguanylate cyclase n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JAZ4_OLICO Length = 493 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 96/477 (20%), Positives = 180/477 (37%), Gaps = 31/477 (6%) Query: 92 PLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEI 151 + + R A A I+ + R++ V +S N + Sbjct: 34 SVLLETRRAAGELARSASANLAATIDSDIVRSIEVYDLSLRNAV-------NNMLTLDTE 86 Query: 152 TAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGH 211 +L + +L+ H +++ + + F + + L + + + +F H Sbjct: 87 RISLPILHLILFDHAATAQHYGRIRI----FDETGKLKLDSSTLHPAQESCADKEFFKIH 142 Query: 212 SQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVD-SNNYWYGVLGMSIPVRTMQQFLRNA 270 R + + + P + +S + + + GV+ SI + + Sbjct: 143 --RASSDAGLYVSDPEV---GTGAPALVLSRRITGHDGRFLGVVVGSIRYSYFRDLFSHL 197 Query: 271 IDKNLDGEYQLYDSKLRFLTS--SNPDHPTGNIFDPRELALL--AQAMEHDTRGGIRMDS 326 ++ + R + SN D ++ + + + ++ R + Sbjct: 198 KF-GEGDTATVFRNDGRVMMRQPSNSDTIGKDLSNSAGVRQILATRSGSATLRSTLDNIE 256 Query: 327 RYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSN 386 R W+ D ++V V E + G + + L + + ++ + +++ R ++ Sbjct: 257 RLYVWQNSDRA--LVVVVGKSLESIYGPWWRQVFIIGGLMLMLSAFVIGAAFLLAREMAR 314 Query: 387 MYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDR 446 + L A D LT + NR E+ + + P S++ +D DHFK ND Sbjct: 315 RADAEQRLAQLATTDALTGIDNRRRFDERMLDEWRRGW-QKLPLSLLMIDADHFKTFNDL 373 Query: 447 FGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLN 505 FGHQ GD+VL A I+ S R D A R GGEEF ++LP L +A +AE IR ++ Sbjct: 374 FGHQEGDQVLVRIAKSIAQSSRRPADCAARYGGEEFALLLPDTELDDAMRIAEEIRTRVE 433 Query: 506 EKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + + S+GV+ L AD+ LY AK+ GRNR D Sbjct: 434 RLSTEKWAT-----TVSIGVACVVPDMAGSSRNLIEAADKALYQAKEQGRNRCVGVD 485 >UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0YVN1_9CYAN Length = 1252 Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats. Identities = 94/440 (21%), Positives = 166/440 (37%), Gaps = 20/440 (4%) Query: 129 VSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQP 188 V + + + RE ++ L + + ++ G Q Sbjct: 826 VGNGWIENIHPEDREE--FLKVYQQKFQLRECFSLEYRLRRADGECRWLLETGIPQVNQS 883 Query: 189 TLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNN 248 FT + + + N + + V + + N+ Sbjct: 884 QEFTGYIGSCI-DITESKKIRQQLREIND----QLRDGMNALEQRNQEMVLLG---EMNS 935 Query: 249 YWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSK--LRFLTSSNPDHPTGNIFDPRE 306 + + + + L+ G + L +S+ + + + D F E Sbjct: 936 FVQASSSLQEAHQMLADLLKPLFPDCGGGVFMLGESEHYVEAVATWGEDFVIPTFFRLDE 995 Query: 307 LALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRG-DFGSISIALTLL 365 L + H I S + + + D + + +G G + IA Sbjct: 996 CWALRRGCVHW----IEAKSPNLFCQHISQGDFLPAESLCVPMMAQGNTLGLLYIATLTP 1051 Query: 366 WALFTTMLLISWYVIRRMVSNMY--VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLC 423 L ++ V+ + + LQ + Q+ D LT L+NR L E Sbjct: 1052 GQLTPAKRQLARTVVEHLAIALANVKLQEKFKAQSMRDALTGLFNRRYLEESLEQEIHRA 1111 Query: 424 QTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCV 483 + + + ++ +D+DHFK ND+FGH AGD VL A L+ S+R+ D+A R GGEE + Sbjct: 1112 RRNHYSVGIVMIDIDHFKRFNDQFGHDAGDEVLKTVARLLQGSIRSSDIACRYGGEELTL 1171 Query: 484 ILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLA 543 ILP ASL++ +E+IR + ++ + I+AS GV+ E G+ E + +A Sbjct: 1172 ILPEASLSDTQARSEQIRYMIEHLQLHYENQSLGSITASFGVACFPEHGE-TLEAVLRIA 1230 Query: 544 DRRLYLAKQAGRNRVFASDN 563 D LY AK GRNRV + + Sbjct: 1231 DTALYQAKALGRNRVVCATD 1250 >UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VTQ5_9CYAN Length = 1341 Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats. Identities = 94/410 (22%), Positives = 165/410 (40%), Gaps = 23/410 (5%) Query: 161 LRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRA 220 ++V+ +G + ++ + QR N+ Sbjct: 948 FSREKRYIRKDGSEVWVNLSGSLIRN-SQGEPKSYIAVVQDISDRKQAQATLQRLNQQLT 1006 Query: 221 VRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQ 280 R E S V + D +++ L + + + + + G + Sbjct: 1007 GRV----NELGSRNREMVLLG---DLSDFLQACLTVDEAYQAIATLVAPLFPGSSGGVFV 1059 Query: 281 L--YDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHF- 337 + ++ + + + + +F P+ L + H + ++ S R H Sbjct: 1060 INPSENWVEAMATWGTALASQTLFSPKSCWALRRGRPH-------LVTQPQSGLRCPHIH 1112 Query: 338 -DGVLVRVHTLSEGVRGD-FGSISIALTLLWALFTTMLLISWYVIRRMVSNMY--VLQSS 393 D + + +G G + I+ L L ++ V + ++ L+ + Sbjct: 1113 SDSSPLESFCVPMMAQGKALGILYISSPQLGQLTEAKQRLALTVAEHLALSLANLKLRET 1172 Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 L Q+ D LT L+NR + E Q HQ P +I +D+DHFK ND FGH+AGD Sbjct: 1173 LSQQSIRDALTGLFNRRYMEESLEREIHRAQRHQRPMGIIMLDIDHFKHFNDTFGHEAGD 1232 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 VL + S+RA D+A R GGEE +ILP ASL + + AE+IR + ++ Sbjct: 1233 AVLRELGIFLQRSIRASDIACRYGGEELMLILPDASLADTKQRAEQIRHDVKGLQIEYHH 1292 Query: 514 STTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 I+ S+GV++ E G ++L + ADR LY AK GR+RV + + Sbjct: 1293 KLLDAIAISVGVAAFAEHG-STAQELIAAADRALYQAKAQGRDRVVTASS 1341 >UniRef50_C6CQG0 Diguanylate cyclase n=7 Tax=Enterobacteriaceae RepID=C6CQG0_DICZE Length = 491 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 97/396 (24%), Positives = 164/396 (41%), Gaps = 23/396 (5%) Query: 176 YVSRAGFYVST--QPTLFTRNVPTRYYGYV--TQPWFIGHSQRENRHRAVRWFTSQPEHA 231 + + F+VS + V Q +F + ++N + Sbjct: 110 FNTVVSFFVSNNTRRYYDPEKVTHTLSEQSPDDQWFFDIKNAQDNEP---YDIEIGVDPE 166 Query: 232 SNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLT 290 T + ++ V D + + GV G+ +PV+ + Q + ++ + L D + Sbjct: 167 KRTRMDIFINYKVLDYDGQFLGVTGVGLPVQRVTQLI-ETYEQRYNRTIYLIDENGDVML 225 Query: 291 SSNPDHPTGNIFDPRELALLAQAMEHDTRGGIR----MDSRYVSWERLDHFDGVLVRVHT 346 S H NI L LA + G + ++ +++ + F L+ Sbjct: 226 HSKNFHRALNIHQQPGLQPLATQILTSPGGNYQYALNNENIFLNTRIIPEFGWKLMVEQN 285 Query: 347 LSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRL 406 + R + ++ + + MLL+ W I Q L+ A D LT L Sbjct: 286 STPHDRQLWSTLLKNTGISITVSVAMLLLIWLTIG-------AYQRRLELMATTDKLTGL 338 Query: 407 YNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSS 466 NR A R L T FS+I +DLD+FK IND++GH GDRVL A LI + Sbjct: 339 MNRQAFEYVFRTLRIKQSTQHRTFSIILIDLDYFKKINDQYGHHVGDRVLVRTARLIQRT 398 Query: 467 LRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVS 526 +R D A R GGEEF ++L S ++A +AE+IR + ++ + I ++ S G++ Sbjct: 399 IRKTDSACRWGGEEFVLLLADCSRSQAHFIAEKIRRAIR-FALVSHQHQVINLTISCGIA 457 Query: 527 SSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 S + L AD LY AK+ GR++ ++ Sbjct: 458 ESHPG--ESIDHLVQRADNALYQAKRQGRDQAVIAE 491 >UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0X5_DESAD Length = 779 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 99/432 (22%), Positives = 168/432 (38%), Gaps = 28/432 (6%) Query: 146 SLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQ 205 +L++ ++V + ++V+ V + + +V + Sbjct: 349 ALEDSEKIFMDVADAAGEFIWETGPDGSFVFVTGRAEDVLGYSA--EELIGRSPFDFVDE 406 Query: 206 PW-------FIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSN-----NYWYGV 253 + F+ +Q N + VPV + Sbjct: 407 EYSWDVRKEFLDAAQFGNSFNGL--VFRFVNRDGRKIWLEFNGVPVFDAEGVVTGFRGAT 464 Query: 254 LGMSIPVRTMQQF-----LRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELA 308 +S + +Q + +I ++ L D K + NP IF R Sbjct: 465 SDISAQKKALQDLQDREDMLQSISDSVQDALVLMDEKG-LVHFWNP--AAEKIFGYRADE 521 Query: 309 LLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWAL 368 +L ++++ + + ++ DG+L + + VR G + A LL L Sbjct: 522 MLGESLQCCFHAEDNLLPENLGNTD-NYIDGLLSSYGSFTVNVRRKGGDVFPAEVLLSPL 580 Query: 369 FTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQH 428 R V+ + L+ A D+LT L NR E A + + + Sbjct: 581 RKDDQWW-VVGTFRDVTERKEAEDKLRKLATTDSLTGLSNRRFFMESAEDALERTRRYGR 639 Query: 429 PFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGA 488 S++ +D+D+FK +ND +GH AGD VL + LR DV GR+GGEEF ++LP Sbjct: 640 DLSLLMMDIDYFKTVNDMYGHDAGDDVLKGLSKTGLKILRNIDVFGRIGGEEFSILLPDT 699 Query: 489 SLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLY 548 L A VAER+R ++ +M ++ I+ S+GV++ E EQL AD LY Sbjct: 700 GLDGATLVAERLRAEIETTKMNTRSG-SLNITVSIGVATYSEH-TKTLEQLLKAADIGLY 757 Query: 549 LAKQAGRNRVFA 560 AK+AGRN+V Sbjct: 758 AAKEAGRNQVKV 769 >UniRef50_A8IBW0 GGDEF domain protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IBW0_AZOC5 Length = 506 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 121/481 (25%), Positives = 191/481 (39%), Gaps = 19/481 (3%) Query: 91 APLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNE 150 A + FT + ++ ++ +DE + + RR V +S S ++L L++E Sbjct: 31 ALVLFTLRQYSIFYYDAAKDEAIAEAQDTIRR--VVLDISQTFYSYDSILKSAIAVLEDE 88 Query: 151 ITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYG-YVTQPWFI 209 A L RL + MV Q YV + + T Y +F Sbjct: 89 AIATLAPDVQDRLL---ARMVVQFPYVRSIVVLTPSGTVRNSSISGTPVQDDYGGSDFFR 145 Query: 210 GHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRN 269 + F+ E E QV +S + + GV + + +R + N Sbjct: 146 EQVSGALVGPYMALFS--REGLKGLEYQVAISRRITYAGQFRGVAVVFVRLRDFRDQFTN 203 Query: 270 AIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNI---FDPRELALLAQAMEHDTRGGIRMDS 326 I+ L + LT G+ P +LA L + E R+D Sbjct: 204 -INIGGGNTLVLVHDSGQILTRKPSRDGLGDFGTAVSPSKLARLQRTSEGSYFDVSRLDG 262 Query: 327 R--YVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMV 384 R ++R+ + +LV V T + + ++ AL L + + +RR Sbjct: 263 RQRLFVFQRVPEWPLMLV-VGTPVDAIDAEWRQRIAIAGSASALSCFALAVLGFRLRRER 321 Query: 385 SNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAIN 444 +++L+ + D LT L NR E + + SV+ +D DHFKA+N Sbjct: 322 IKRAEAEAALEQLSVTDFLTGLANRRRFDEVVQREFRRAVRTDGWLSVVIIDADHFKALN 381 Query: 445 DRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 DRFGH AGD L A ISS RA D+ R+GGEEF ++LP S A E+ ERIR Sbjct: 382 DRFGHSAGDETLKMIATAISSCARRASDLGARLGGEEFAIVLPDTSAAAAYELTERIRRT 441 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEET-GDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + + S G++S+++ L AD+ LY AK AGRNR + Sbjct: 442 MEAHAF-NPDGPPAT-TLSAGIASTKDRPAPESVRALIEAADQALYRAKNAGRNRTELAA 499 Query: 563 N 563 + Sbjct: 500 S 500 >UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HRM0_AZOC5 Length = 514 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 104/471 (22%), Positives = 176/471 (37%), Gaps = 38/471 (8%) Query: 100 DAVTEFEQHRDEHAWKIELNRRRTLPV--NGVSDALVSEGNLLSRENE------SLDNEI 151 E L R + V V+ + ++ L + Sbjct: 47 YGDVAREAASHGEQRVDSLARDVAGQIFPYRVLLRQVAADYADPQTDQTPAGWQRLLARM 106 Query: 152 TAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGH 211 +A E ++ L S +V + S +P V T QP+F H Sbjct: 107 ISATERSGVMLLTDASGQVVAR-----------SDRPAGPGERVRT-------QPYFALH 148 Query: 212 SQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNA 270 ++ + + S+ TEP + +S + D + + GV + +P+ +++ L+ Sbjct: 149 AKGQVDGPYL----SERVACDGTEPCIALSQALKDPDGQFAGVAAVLLPLSLLREPLKAE 204 Query: 271 IDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVS 330 + D P + +A A+ R Sbjct: 205 AAETSDPMLV-ARIDGTLFVEECGTSGICIRPPPDLIREIAGAVHAPVTLSYGDGKRTFY 263 Query: 331 WERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVL 390 + ++V + + + T + V+R + L Sbjct: 264 AAPVPQL-PLVVATGQSIRDIFLPWRYRVLVGTAAVLTVGFASIAIALVLRHDLMRRSRL 322 Query: 391 QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ 450 Q+ L + D LT + NR F+ A + Q P +V+ +D+D FK +NDR GH Sbjct: 323 QAELLQLSLTDDLTGIANRRRFFDVAIREWQRAQRLGSPVAVLMIDIDRFKLLNDRLGHA 382 Query: 451 AGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 AGD VL A LI SL R D+A R GGEEF ILP + A + AERIR ++ + Sbjct: 383 AGDAVLQAIAQLIRHSLRRPADLAARYGGEEFTAILPDTDMAGAFQTAERIRTQVERDVI 442 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 ++ S+G++++ + + FE + + ADR LY AK++GRNRV Sbjct: 443 RGDH----PVTVSIGIAAAIASPNETFENVVAAADRALYRAKESGRNRVMV 489 >UniRef50_D2C2R9 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech586 RepID=D2C2R9_DICD5 Length = 501 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 99/396 (25%), Positives = 161/396 (40%), Gaps = 23/396 (5%) Query: 176 YVSRAGFYVSTQ--PTLFTRNVPTRYYGYV--TQPWFIGHSQRENRHRAVRWFTSQPEHA 231 + + F+VS + + +F R+ + + Sbjct: 120 FNTVVSFFVSNNTHRYYDPEKISHTLLETSPEDKWFFDI---RDEKDGDPYDIEIGVDPE 176 Query: 232 SNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLT 290 + T + ++ V D + + GV G+ +PV+ + Q + ++ + L D + Sbjct: 177 NRTRMDIFINYKVFDYSGNFIGVTGVGLPVQRVTQLI-ETYEQRYNRTIYLIDEDGDVML 235 Query: 291 SSNPDHPTGNIFDPRELALLAQAMEHDTRGGIR----MDSRYVSWERLDHFDGVLVRVHT 346 S H NI L LA + G R ++ +++ + F L+ Sbjct: 236 HSKAFHRASNIHQQPGLQSLATQVLTSPGGSYRYSLDGENIFLNTRVIPEFGWKLMVEQN 295 Query: 347 LSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRL 406 R + ++ + MLL+ W I Q L+ A D LT L Sbjct: 296 SGPHDRQLWITLLKNTGISITASIAMLLLIWLTIG-------AYQRRLELMATTDKLTGL 348 Query: 407 YNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSS 466 NR A R L Q FS+I +DLD FK IND++GH GDRVL A LI + Sbjct: 349 MNRQAFEYIFRTLRMKQSAQQRTFSIILIDLDFFKKINDQYGHHIGDRVLVKTARLIQRA 408 Query: 467 LRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVS 526 +R D A R GGEEF ++L SL +A VAE+IR + ++ + I ++ S GV+ Sbjct: 409 IRKTDSACRWGGEEFVLLLGDCSLHQAHRVAEKIRQAV-HFALVSHRHQVINLTISCGVA 467 Query: 527 SSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 S + L AD+ LY AK+ GR++ ++ Sbjct: 468 ESNPG--ESIDHLVQRADKALYQAKRQGRDQAVMAE 501 >UniRef50_Q0K115 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF) n=1 Tax=Ralstonia eutropha H16 RepID=Q0K115_RALEH Length = 538 Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats. Identities = 104/485 (21%), Positives = 186/485 (38%), Gaps = 26/485 (5%) Query: 88 ALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESL 147 AL A RDA+ + A +E + R L ++ ++ + E + +L Sbjct: 60 ALGALALVQMRRDALDNASEASANLALTLERSITRNLQIHELAIGGIVEAM----HDPAL 115 Query: 148 DNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPW 207 + A + RL + + + G V + P R + + Sbjct: 116 LAQPPALRQRLLFDRLINAED--MGSLLVTDANGTLV-----FDSHQWPPRPVNVSDRDY 168 Query: 208 FIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDS-NNYWYGVLGMSIPVRTMQQF 266 F H + H + + + +S + + + + G + ++ + ++ Sbjct: 169 FQVHRSGD--HSGLFLSRPFQPRLAPENKSIGISRRLSAPDGSFAGTVVGTLRLNYFRK- 225 Query: 267 LRNAIDKNLDGEYQLYDSKLRFLTSSNPD--HPTGNIFDPRELALLAQAMEHDTRGGIRM 324 L + + G L + + + +I A L Q + G + Sbjct: 226 LFDGVSLGAGGTLTLLRTDGTIIMRRPYEAESIGRDISGSPSFAPLLQGTQGTFIGVAAV 285 Query: 325 DS--RYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRR 382 D R S+ R F +LV V + V + + + ++ ++ R Sbjct: 286 DGVQRLYSFRRTPGF-PLLVVVGRATHDVLAPWHKRAWVFGAMIIALDAAIIALSVLLSR 344 Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 ++ L+W D LT L +R AL + A + + H P S++ +D+DHFK Sbjct: 345 QWRRRVEMEEHLRWMVNTDGLTGLGSRRALDDAADVEWRRARRHSQPLSLLMLDVDHFKE 404 Query: 443 INDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 NDR+GHQAGD L+ I + R D AGR GGEEF ++LP + AA +AE IR Sbjct: 405 FNDRYGHQAGDDALAAVGACIQRQVRRPGDYAGRYGGEEFAILLPHTNAAGAAAMAEAIR 464 Query: 502 LKLNEKEMLIAKSTTIRISASLG-VSSSEETGDY----DFEQLQSLADRRLYLAKQAGRN 556 + ++ A ++ S+G V+ + G+ + D LYLAK++GRN Sbjct: 465 AAVQALQIPNAAGADGHLTVSIGAVTDANGPGNEKDFAELRAFLRAGDEALYLAKRSGRN 524 Query: 557 RVFAS 561 V Sbjct: 525 CVATF 529 >UniRef50_Q4ZR62 GGDEF n=5 Tax=Pseudomonas syringae group RepID=Q4ZR62_PSEU2 Length = 548 Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats. Identities = 92/438 (21%), Positives = 168/438 (38%), Gaps = 28/438 (6%) Query: 138 NLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPT 197 +L R + + + + N + +Y ++ + ++ Sbjct: 102 DLAERVEQDGAAGEQQSRLTRLMAQDLVNVKGLQGLFIYDAQGNWVANSF------AKGV 155 Query: 198 RYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDS-NNYWYGVLGM 256 + + +FI H + S E + + + VS +++ + + GV Sbjct: 156 QTRNNEDRAYFIYHRDNPDPSIH---IGSIVESRNTGDMIIPVSRRINAADGSFAGVALA 212 Query: 257 SIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEH 316 ++PV Q F + +D + G L + L P + + + + + + Sbjct: 213 TVPVTYFQAFFQR-MDVDDKGVIFLALNNGDLLARR-PTLTALMTTNVAKGDIFTRYLPY 270 Query: 317 DTRGG------IRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFT 370 G + R ++ R+ ++ S+ V + + + + + Sbjct: 271 SDSGTAVINSVVDGVERIYAYRRVSGL-PIVAAAGISSQHVFAPWWAYAQRSMTITGIII 329 Query: 371 TMLLISWYVIRRMVSNMYVLQSSL-------QWQAWHDTLTRLYNRGALFEKARPLAKLC 423 L+ ++ R + + + L + A D+LT L NR + Sbjct: 330 LALVFLGVLLYRQIQQLITAEGELNIARNDLEIIAHTDSLTHLANRRCFDTALQQEWGRA 389 Query: 424 QTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFC 482 + ++I +D+D FK ND +GH GD L AGLI +SL R+ D+A R GGEEF Sbjct: 390 SRNDATIAIILLDIDWFKQYNDTYGHLQGDDCLRQVAGLIGNSLDRSGDMAARYGGEEFV 449 Query: 483 VILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFE-QLQS 541 ++LP L A ++AE+IR + + + S R+S S GV + D Sbjct: 450 ILLPETDLAGALKLAEKIRSSIEASCIEHSSSPLGRLSISSGVVAINAAEKKDAHTAALK 509 Query: 542 LADRRLYLAKQAGRNRVF 559 ADR LYLAK GRNRV Sbjct: 510 EADRLLYLAKTKGRNRVE 527 >UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobacterales RepID=B7R5U6_9THEO Length = 692 Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 141/350 (40%), Gaps = 14/350 (4%) Query: 212 SQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAI 271 + + ++ E + +V V++ +D M ++ + + + I Sbjct: 357 AMHRRKDGSLYPVEIHLELVEFDKEKVFVALVIDITERRE----MEKELKE-RNEILSTI 411 Query: 272 DKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSW 331 + + D + +T NP + E+ + + + +R+ Y Sbjct: 412 MEYAGDAIIMIDDNGK-VTFWNPAAERILGYSKEEI--IGKDLHMFMIQDMRLYEAYREA 468 Query: 332 ERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQ 391 + G V E I + L + I R +S + Sbjct: 469 FKKFRLTGKGSVVGKTVEMKTRHKNGHEIDVELSLSAVRIKDSWHAIGIIRDISERKRFE 528 Query: 392 SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQA 451 L Q+ D LT +YNR + + + ++ FS+I DLDHFK +NDRFGH A Sbjct: 529 ELLYRQSITDPLTNIYNRRFFMQMLEQEIERVKRNKKLFSLIMFDLDHFKNVNDRFGHAA 588 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GD VL A + +R D R GGEEF ++LP SL AAE+AE +R K++E E+ Sbjct: 589 GDMVLKSVADTVKGRIRKTDYFARWGGEEFIILLPETSLNNAAELAEELRKKISETEL-- 646 Query: 512 AKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 +++AS GV+ T + + D LY AK +GRN V + Sbjct: 647 --DGIGKVTASFGVTEYRNT--DTVDTVLLRVDGALYEAKGSGRNCVKIA 692 >UniRef50_A9C0P7 Diguanylate cyclase n=4 Tax=Proteobacteria RepID=A9C0P7_DELAS Length = 531 Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats. Identities = 104/507 (20%), Positives = 179/507 (35%), Gaps = 63/507 (12%) Query: 105 FEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLA 164 F W++ R+RTL S+ +++ L + + L + L + Sbjct: 33 FVSVSAATVWQLVAARQRTLAEVDTSNRNLAQ-TLNTYAEGVITQSSMLLLGIAERLEVD 91 Query: 165 HNSSSMVEQAMY-----------------VSRAGFYVSTQPTLFTRNVPTRYYGYVTQPW 207 S ++E+ +Y V G ++ + +F + + Sbjct: 92 GTSPVLLERVLYLVNRQEQLLNQLNELLIVDAQGHWLMSSKGVFPEGSES-----SGLDY 146 Query: 208 FIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVP-VDSNNYWYGVLGMSIPVRTMQQF 266 F H R++ + S E +T+S D+ + G + +++ V + Sbjct: 147 FTHH--RDDASSGIYIGPPIRSR-STGEWVITISRRYTDAEGQFAGAVVVALGVENFLR- 202 Query: 267 LRNAIDKNLDGEYQLYDSKLRFLTSSNPDHP--TGNIFDPRELALL---AQAMEHDTRGG 321 L ID G L + L + A + R Sbjct: 203 LFGKIDIGEKGAIALSTPGGQLLVRHPFREQDLGRDFSQSPNFLRHYVGAMSGTASFRSA 262 Query: 322 IRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYV-- 379 + R ++ R + + V E + + L ++ LF + LI W + Sbjct: 263 LDGTERIYAFLRSERYPLVTTVALGRDEALSSWRRQALLTLAVVLGLFLAIALIGWRLTA 322 Query: 380 -----------IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQH 428 + + L+ A D LT L NR E A+ Sbjct: 323 AMRLRSRAECSLVSAREELLDANRRLEVLAAQDQLTGLANRRRFDEVLEREARRAAREGT 382 Query: 429 PFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPG 487 P S++ +DLD+FK ND +GH AGD L ++ ++ R D+A R GGEE V+LP Sbjct: 383 PLSLLLIDLDYFKGYNDAYGHVAGDACLQAVCSALAQAVQRPGDMAARYGGEELAVVLPN 442 Query: 488 ASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFE---------- 537 A +VAER+R ++ + S ++AS+GV++++ + Sbjct: 443 TDKAGAQQVAERLRARIEGLALEHRISRFGHVTASIGVATAQGDEAGATQGATQGTTQGS 502 Query: 538 ------QLQSLADRRLYLAKQAGRNRV 558 L ADR LY AK AGRN V Sbjct: 503 TQGAAVALVEAADRALYRAKAAGRNCV 529 >UniRef50_C5CZH7 Diguanylate cyclase n=1 Tax=Variovorax paradoxus S110 RepID=C5CZH7_VARPS Length = 512 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 100/491 (20%), Positives = 169/491 (34%), Gaps = 40/491 (8%) Query: 97 SLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALE 156 + D + + + + T+ +D ++ + R + A Sbjct: 33 ARTDQLQQMNVATSNLSRAMAQQADDTIK---KADTVLVGM--VERVEHDGTDPSDVARL 87 Query: 157 VGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQREN 216 L + +Y + +++PT + +F H Sbjct: 88 RQLLALRVAELPQLDGLHIYDQDGNWIANSRPT------RPENLNNADREYFAFHRTHAE 141 Query: 217 RHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNL 275 R + ++ V VS + ++ + GV +I V +F +++D Sbjct: 142 RGPH---IGIPVQSRTSGRLLVPVSRRINHADGSFAGVALATIHVDFFSRFY-DSLDIGQ 197 Query: 276 DGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDS------RYV 329 G L +T P P + E L H G + S R Sbjct: 198 AGAVALVLENGTMMTRR-PYSPDMVGRNMLETQLFRSYAAHGPVGTAYIKSAQDGVTRLN 256 Query: 330 SWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYV---------- 379 S+ RLD++ + + E + + + L + I W + Sbjct: 257 SFRRLDNYPLFVSAALSKDEILANWWRDTLWHSGGVVLLSLIVGFIGWRLVRQFQLQTRT 316 Query: 380 ---IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVD 436 +R+ + L +L A D LT L NR + ++I +D Sbjct: 317 EAELRQARDALETLNKTLNTLAMEDGLTGLANRRQFDVALDSEYSRAARNASTLALIMMD 376 Query: 437 LDHFKAINDRFGHQAGDRVLSHAAGLISSSL--RAQDVAGRVGGEEFCVILPGASLTEAA 494 +D FK ND +GH AGD L I+ R D+A R GGEE V+LP + A Sbjct: 377 VDCFKQYNDIYGHAAGDECLQTIGRTIARVASRRPGDLAARYGGEELAVLLPNTDVAGAV 436 Query: 495 EVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYD--FEQLQSLADRRLYLAKQ 552 +AERIR + E ++ A + ++ S GV + ++L AD+ LY AK Sbjct: 437 MLAERIRSAVRELKIEHAGTADGFVTLSAGVDALSPQAGIGGQPKELIRSADKALYAAKS 496 Query: 553 AGRNRVFASDN 563 GRNRV AS Sbjct: 497 GGRNRVCASTG 507 >UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0B5_9AQUI Length = 463 Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 20/292 (6%) Query: 270 AIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYV 329 D+ + Q+ D + ++ + + + + G + + Sbjct: 191 LSDRYYYEDIQIKDIPITYINKKIRKKVLKFLGKDKPFSFIYN-----NEGNFYLITFIP 245 Query: 330 SWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYV 389 + +H G LVR ++ S +TL + L + + ++ + Sbjct: 246 VFNLNNHLMGYLVR-YSKDNTYPIILKSFYTNITLSFLLAVILGFSVYIFLKDL------ 298 Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 ++ + D LT LYN+G E + + + ++ P S+I D+DHFK IND +GH Sbjct: 299 --EKFRYLSETDRLTGLYNKGKFNEVLQREIQRAKRYKRPLSLIIFDIDHFKKINDTYGH 356 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 + GD VL A LI ++R D A R GGEEF ++ P ++ A ++AE++R + + Sbjct: 357 KVGDEVLKALAKLIKKNIRKTDFAARWGGEEFVILAPETNVEGAKKLAEKLRQAVETYKF 416 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 +++ SLGV+ E D E AD LY AK+ GRNRV + Sbjct: 417 PTVG----KVTISLGVAQLEP--DEKPEDFIVRADMALYKAKEGGRNRVEIA 462 >UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGI8_CYAP7 Length = 1079 Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats. Identities = 90/321 (28%), Positives = 149/321 (46%), Gaps = 11/321 (3%) Query: 246 SNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSK--LRFLTSSNPDHPTGNIFD 303 N++ L + + + + L+ G Y L SK + + + + N+F Sbjct: 759 VNDFLQACLNIKEAYQVIGELLQPLFPGCSGGLYMLNSSKTVVEEVATWGEHLSSKNLFT 818 Query: 304 PRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDF-GSISIAL 362 E L + H + S+ + H LV + +G G ++ Sbjct: 819 FDECWALRRGYIHWVK-----PSQRSLFCTHTHVTPDLVETLCVPMMAQGQAVGLFYLSA 873 Query: 363 TLLWALFTTMLLISWYVIRRMVSNMY--VLQSSLQWQAWHDTLTRLYNRGALFEKARPLA 420 + L ++ V + + L+ SL+ Q+ D+LT LYNR + E + Sbjct: 874 SEPDKLSEVKQQLARAVSEHISLALVNLQLRESLKAQSIKDSLTDLYNRRYMEESLKREI 933 Query: 421 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 L Q QH +I +D+DHFK ND FGH+AGD VL + + ++R+ D+A R GGEE Sbjct: 934 SLAQRKQHSVGLIMIDVDHFKEFNDTFGHKAGDLVLQEVSNFLMINVRSGDIACRYGGEE 993 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 540 F +ILP ASLT++ + AE+IR + + + + ++ S+GV+S + G + +QL Sbjct: 994 FLLILPEASLTDSQQRAEQIRQGIKQLDFKRYDQSFRSVTVSVGVASFPDHGTNN-DQLI 1052 Query: 541 SLADRRLYLAKQAGRNRVFAS 561 AD LY AK+ GR+RV Sbjct: 1053 QAADTALYQAKKQGRDRVVVF 1073 >UniRef50_A8GGC9 Diguanylate cyclase n=1 Tax=Serratia proteamaculans 568 RepID=A8GGC9_SERP5 Length = 516 Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats. Identities = 89/491 (18%), Positives = 172/491 (35%), Gaps = 38/491 (7%) Query: 93 LDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEIT 152 + + + + E A + + T + + +S R Sbjct: 42 QIWNAHQRDLQSAENESANLARALAQHADDTFMQTDSTLSDLS-----ERIQVDGLARPQ 96 Query: 153 AALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHS 212 + N + +Y ++ + V++ + + +F H Sbjct: 97 LLRLQKVMQTQVGNLPQLHGLFVYDAQGNWVVTSSGRF------VQNANNADREYFKYHL 150 Query: 213 QRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAI 271 E+ AV S + + VS + + GV+ ++ + +QF + Sbjct: 151 --EHNSNAVYIGKVVRSR-STGDLIIPVSRRFNHPDGSFAGVVLATLYINYFRQFY-DTF 206 Query: 272 DKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSW 331 N D L + L + E L + + H G + SRY Sbjct: 207 ALNSDASLNLLLADGTILYRRPYSLAAIG-KNISEGVLFREILPHSEFGNATITSRYDKV 265 Query: 332 ERLDHF-----DGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSN 386 ER+ + +++ + V D+ + S L A +LL V+ R +++ Sbjct: 266 ERIYGYSRVTRYPLVIAAGLSKKDVLADWRNDSGLFALGGATLLAILLAMGMVLMRQINH 325 Query: 387 MYVLQSSL--------------QWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSV 432 ++ L + A D LT L NR + + ++ Sbjct: 326 SVRTEAELMRTRDQLTSINRTLEELALLDGLTGLANRRQFDIALKNELMRASRNYRSVAL 385 Query: 433 IQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLT 491 + +D+D+FK ND +GH AGD+ L ++ R+ D+ R GGEE +ILP Sbjct: 386 LMLDIDYFKQYNDIYGHVAGDQCLQQIGQMLKGMASRSNDIMARYGGEEMAIILPDTDAQ 445 Query: 492 EAAEVAERIRLKLNEKEMLIAKSTTIRISASLGV-SSSEETGDYDFEQLQSLADRRLYLA 550 A AER+ + E ++ + I+ S+G+ + + + AD LY A Sbjct: 446 GALIFAERVIEAVRELKIPHDGNPHGVITISIGIYAKVPHMYNDTPMSFINQADSALYQA 505 Query: 551 KQAGRNRVFAS 561 K G+NR++++ Sbjct: 506 KAQGKNRIYSA 516 >UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55906_SYNY3 Length = 768 Score = 287 bits (734), Expect = 8e-76, Method: Composition-based stats. Identities = 117/582 (20%), Positives = 211/582 (36%), Gaps = 55/582 (9%) Query: 3 HETKMENQSWLKKLARRLGPGHVVNLCFIV--VLLFSTLLTWREVVV---------LEDA 51 HET W K+ R+ G V + V L T+ ++ L +A Sbjct: 217 HET--PEP-WQKEYYRKDGSRIPVLVGVASIDVELEYTVCIVVDMTEQQKTLDQCRLTEA 273 Query: 52 YISSQRNHLENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDE 111 ++ LE K LQ N D+L L F + + + + Sbjct: 274 KLAELNAQLEQRVLERTKSLQENEDRL-------------KLAFNAANMGYWDLDLLTNG 320 Query: 112 HAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMV 171 W L + G+ + + + + + L + HN Sbjct: 321 IVWSESL-----EQMMGLKPGSFDGD---LEKVAQMMHPDDRGIVLKALEQSIHNDEPYD 372 Query: 172 EQAMYVSRAG---FYVSTQPTLFTRNVPTRYYGYVT-----QPWFIGHSQRENRHRAVRW 223 + ++ G + S + +N V + F Q+ N+ R Sbjct: 373 LEFRFIKPDGTLRWAASQATVIRDQNNVPLRVIGVDVDITRRKQFEEELQKVNQVLEERL 432 Query: 224 FTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYD 283 E + +S +Y + + + G + L Sbjct: 433 G----ELKQRNAEMLILS---GITDYLQSCFTVKDACGVIAALAQPLFPDCCGGIFILSA 485 Query: 284 SK--LRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVL 341 L +T + ++F P + L + H + G + + H Sbjct: 486 QNNCLERVTFWGNPFCSDDVFTPLDCWALRRGRSHGVKQGQHAL--FCNHVNDQHLPLAS 543 Query: 342 VRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHD 401 + + +++G + + L + + L+ L+ Q+ D Sbjct: 544 LCIPLIAQGETLGLLFLCTFKGEILPDIRQQLAKTVAEQLALAIANLKLREQLEEQSLRD 603 Query: 402 TLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAG 461 LT+L+NR L ++ + H + V+ +D+DHFK ND GH AGDR+L+ Sbjct: 604 PLTKLFNRRYLEQRLSQELARAKRHHYSVGVLMIDVDHFKRFNDSLGHDAGDRILASIGT 663 Query: 462 LISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISA 521 L+ +++R DVA R GGEE +ILP A+L EA++ AE +R + E ++ + ++A Sbjct: 664 LLKNNIRTSDVACRYGGEEITIILPDATLEEASQKAEFLRQAIAEMKIEYSGKIVNSVTA 723 Query: 522 SLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 S GV+ + G+ +++ +AD+ LY AKQAGRNRV + Sbjct: 724 SFGVACYPDHGETG-QEIIQIADKALYDAKQAGRNRVIVAPK 764 >UniRef50_Q1K453 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K453_DESAC Length = 481 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 98/395 (24%), Positives = 169/395 (42%), Gaps = 26/395 (6%) Query: 176 YVSRAGFYVS----TQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHA 231 Y + F+VS +F +++ P+ A Sbjct: 99 YGTVTSFFVSDHTYHYYYADGILKTVSADEPRDVWYFRVRDMQQD-----YEINVDPDMA 153 Query: 232 SNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRF-L 289 ++ + ++ V D + + G G+ + V ++ + N +N D + L Sbjct: 154 NHDSMTIFINYRVKDYQDQFIGATGVGLTVSAVKNLIEN-YQQNYQRTIFFVDPQGVLTL 212 Query: 290 TSSNPDHPTGNIFDPRELALLAQAMEHDTRGGI---RMDSRY-VSWERLDHFDGVLVRVH 345 ++ D L+ + ++ + + R + ++ + F L+ Sbjct: 213 AGKEFPTSITSLADIEGLSAHRDQLLNEQQNTLVYQRNGETFHLNTRYISEFGWYLMVEQ 272 Query: 346 TLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTR 405 + +R ++ I + + + + +++++ I R Q L+ A D LTR Sbjct: 273 SEEPMLRQIRLTLLINVAICFTVTFIVIILTQMTINRY-------QKRLEEMALTDKLTR 325 Query: 406 LYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISS 465 + NR A+ + L K Q HQ PFSVI DLD+FK IND GH AGD VL + A ++++ Sbjct: 326 IANRQAIDLHLQQLFKEQQRHQVPFSVILFDLDNFKQINDTHGHIAGDAVLQNIANIVTT 385 Query: 466 SLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGV 525 LR DV GR GGEEF V+L L +A + AE IRL + + + T+ +AS GV Sbjct: 386 ELRDCDVVGRWGGEEFLVLLKHCQLDDALKRAESIRLAIQSYAIGFEE-QTLYTTASFGV 444 Query: 526 SSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + D++ L AD+ LY+AKQ G+NR Sbjct: 445 VEYRDQDDHN--TLLKRADQALYIAKQNGKNRCEV 477 >UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IZF7_RHOP2 Length = 753 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 99/448 (22%), Positives = 164/448 (36%), Gaps = 29/448 (6%) Query: 127 NGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVST 186 G +DA+V L + A ++ + H ++ + + R G V T Sbjct: 289 VGTADAVVRVLAASPVIAPLLVSPERANRDLARAVIDLHVETAGASRGFILDRNGHIVET 348 Query: 187 QPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-D 245 + + T WF R ++ + S+P+ D Sbjct: 349 TDRHDFDVLGA--ASHKTTVWFQSSIGGRT-GRNLQIDP------FSGRQSYVSSLPLHD 399 Query: 246 SNNYWYGVLGMSIPVR----TMQQFLRNAIDKNLDGEYQLYDSKLRFL-TSSNPDHPTGN 300 GV+ + + + ++ F + + L + T Sbjct: 400 PAGSIIGVVALEVLLEKLDARLRGFEQAFFLLDARDVVVLTSRPAQLSRTLWPRPDMVPA 459 Query: 301 IFDPRELALLAQAMEHDTRGG--IRMDSRYVSWER--LDHFDGVLV----RVHTLSEGVR 352 + ++ + H GG R R R ++ +V + + Sbjct: 460 APEQPSSTPHSEPLRHAVTGGEWTRFGGRRSYVLRSVVEGTPWSVVLTLPVAGITASRLL 519 Query: 353 GDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGAL 412 G ++ +ALT L+ F + V + + S + ++L QA D LT L+NR Sbjct: 520 GIIITLQLALTALFYFFGRERGVRDRVQQLLRSELQERAAALARQATTDPLTGLHNRLRF 579 Query: 413 FEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDV 472 E + P S++ D+DHFK +NDR+GH GD+VL + ++ LR D+ Sbjct: 580 NEGLAQELARVRRTGQPLSLVMFDVDHFKEVNDRYGHPTGDQVLIRLSQTAAAQLRQTDL 639 Query: 473 AGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETG 532 R GGEEF ++L A L A EVAE +R + ++AS GV+ Sbjct: 640 LARWGGEEFAILLVDADLHAAVEVAENLRRLVARTPF----DQIGSVTASFGVAECRP-- 693 Query: 533 DYDFEQLQSLADRRLYLAKQAGRNRVFA 560 D + L AD LY AK GRNRV Sbjct: 694 DESADSLLERADAALYRAKSNGRNRVEI 721 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 108/202 (53%), Gaps = 1/202 (0%) Query: 360 IALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPL 419 + ++ + + + ++ L+ L+ QA D LT + NR E+A Sbjct: 389 LNRGMVISRSSDGKPLRMIGTSTDITERKQLEEELKRQARIDFLTGVSNRRYFMEQAEQE 448 Query: 420 AKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGE 479 + + P S +D+D FK +ND +GH++GD VL A + +LR D+ GRVGGE Sbjct: 449 IQRTSRYDTPLSFFMLDIDLFKQVNDTYGHKSGDIVLKRMASVCRETLREIDIIGRVGGE 508 Query: 480 EFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQL 539 EF ++LP +AAEVAER+R L ++++ I+ + S+GV+S + + + L Sbjct: 509 EFAILLPETDKAQAAEVAERLRSVLADEKVPTEAGAPIQFTVSIGVAS-RVSSQDNIDML 567 Query: 540 QSLADRRLYLAKQAGRNRVFAS 561 +LAD LY AK+ GRNRV+ + Sbjct: 568 LNLADEALYQAKKYGRNRVYIA 589 >UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B886_9CHRO Length = 1121 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 87/323 (26%), Positives = 144/323 (44%), Gaps = 11/323 (3%) Query: 246 SNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSK--LRFLTSSNPDHPTGNIFD 303 N++ L + + + L+ G Y L DSK L + + + + ++F Sbjct: 803 VNDFLQACLNIEEAYEVIGELLQPLFPGCSGGLYMLNDSKTLLEAVVTWGENISSKSLFT 862 Query: 304 PRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDF-GSISIAL 362 E L + H + ++ H V + +G G ++ Sbjct: 863 FDECWALRRGYIHLVK-----PNQPSLLCLHTHRTPAPVESLCVPMMAQGKAVGLFYLST 917 Query: 363 TLLWALFTTMLLISWYVIRRMVSNMY--VLQSSLQWQAWHDTLTRLYNRGALFEKARPLA 420 + + ++ V + + L+ SL+ Q+ D+LT LYNR + E + Sbjct: 918 SEPEKISEVKQQLARAVSEHISLALVNLQLRESLESQSIKDSLTGLYNRRYMEESLKREI 977 Query: 421 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 L Q QHP +I +D+DHFK ND FGH+AGD +L + +++R+ D+A R GGEE Sbjct: 978 NLAQRKQHPVGLIMIDVDHFKQFNDNFGHKAGDLILHEVGNFLMANVRSGDIACRYGGEE 1037 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 540 F +ILP ASL+++ + AE+IR + + S ++ S+GV+ G E L Sbjct: 1038 FLLILPEASLSDSQQRAEQIRKGIKQLNFQQYNSAFTSLTVSIGVACFPAHGKQG-ETLI 1096 Query: 541 SLADRRLYLAKQAGRNRVFASDN 563 AD LY AK GR+RV + Sbjct: 1097 QSADMALYQAKNQGRDRVVVFSS 1119 >UniRef50_Q2T675 GGDEF domain protein n=24 Tax=Burkholderiaceae RepID=Q2T675_BURTA Length = 572 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 91/490 (18%), Positives = 171/490 (34%), Gaps = 35/490 (7%) Query: 78 LIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEG 137 L+ LR +A+ + + + R + + G+ + Sbjct: 105 LVTLRAARNQAIEHAHEMSRNIATIIVSNIARTID----SSDHSLLTLIAGLDQPEIRRL 160 Query: 138 NLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPT 197 +R D A YV+ G + + Sbjct: 161 ERATRHELLFD---------------------RTAAAKYVTGMGVMSVHGRIVDGCCNAS 199 Query: 198 RYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVD-SNNYWYGVLGM 256 R + + +F+ H + + A + + +S + ++ + GV + Sbjct: 200 RAGVFSDRDYFLVHRNTRD--AGLFVSKPYRSRARDGVESIALSRRISKADGSFDGVAVV 257 Query: 257 SIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSN--PDHPTGNIFDPRELALLAQ-- 312 +I V + L + ++ +G + + + P + + Sbjct: 258 AIDVAYFRHLL-SKLNVGPNGVSAIVHVDGTLVARNPGLPHAGPSIVVKSPTFPRMVNHD 316 Query: 313 AMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTM 372 A + R I R ++ER+ ++ V + V + S+++ + + A + Sbjct: 317 AGFYAARSSIDGVLRLYTFERIPGT-PLIAVVAPAQQDVLASWHSLALGVGISAACVSVA 375 Query: 373 LLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSV 432 +++ + + + L + D LT L NR AL + + Q + S+ Sbjct: 376 FSGVVWLLAFALRDRTAARDRLLELSRTDPLTGLGNRRALDDALQSEWARLQRNDSCLSI 435 Query: 433 IQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLT 491 + +D DHFK ND GH GD L A I+ R+ D+A R GGEEF ILP A Sbjct: 436 LFIDADHFKRYNDAHGHTQGDLALKRLAACIARHAGRSGDLAARYGGEEFVAILPDADEA 495 Query: 492 EAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAK 551 AA +A IR + + A R + S+G +++ + AD LY AK Sbjct: 496 AAARIAASIRAGIRDATRAGATPPIPRFTVSVGCATARRGAHASLDAFVRAADDALYRAK 555 Query: 552 QAGRNRVFAS 561 GR+R A+ Sbjct: 556 ADGRDRTVAA 565 >UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRA7_DESBD Length = 495 Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats. Identities = 98/488 (20%), Positives = 175/488 (35%), Gaps = 17/488 (3%) Query: 78 LIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEG 137 ++ + +G+ A +A + + + + R + L + V + ++E Sbjct: 17 VVLVASGLTLATLALVVVMACSSYRSTLDAARQNARFISSLVATQMGMVLIDIENSLTET 76 Query: 138 NLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPT 197 L ++L L + S + + S+ T P + Sbjct: 77 ARLVAMMQNLPPREQNDQLREVLGSIQRKKSYIQTMFITDSQGQVMSWTGPGIAP----- 131 Query: 198 RYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGM 256 + + + H + V VS+ + D ++G Sbjct: 132 ---DISDRDYVVAH---QGNDLGVFIGVPMHSKVRPETWVFGVSLGMRDRQGQLTHIVGA 185 Query: 257 SIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEH 316 + + + + + +++D + D + R + P + M+ Sbjct: 186 VVALLPLLE-IFDSVDMPQGTHLMVTDLEGRIYLHAPNQEQHVGRTVPEIKNSALRDMQS 244 Query: 317 DTRGGIRMDSR--YVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLL 374 + V+ + +L E V + + ++ + ++ Sbjct: 245 TPFTSVSAADHRELVAGDTRISRYPLLAFASFPREMVLEPWKNHAMVYGGASIVLVLVVA 304 Query: 375 ISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQ 434 ++ R + L A D LT NR A E A + S I Sbjct: 305 GLSTLLVRGQIRLNRQSRELALAASTDMLTGALNRRAFMESASREFARVCRYGGHLSCIM 364 Query: 435 VDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAA 494 +DLDHFK +ND +GH AGD VLS +A I+S LR D+ R GGEEF ++LPG AA Sbjct: 365 IDLDHFKNVNDTYGHAAGDLVLSSSAHYIASRLREPDMFCRYGGEEFVILLPGTDRNGAA 424 Query: 495 EVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAG 554 VAE +R L ++ + ++AS GV+ + L SLAD+ LY AK+ G Sbjct: 425 TVAEELRAGLAGLDLQRGDEK-LPLTASFGVAEI-HAQCATLDTLLSLADQALYEAKENG 482 Query: 555 RNRVFASD 562 RNRV + Sbjct: 483 RNRVCLAP 490 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats. Identities = 70/270 (25%), Positives = 119/270 (44%), Gaps = 3/270 (1%) Query: 293 NPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVR 352 + D P I + + E+ ++ + ++ + G Sbjct: 34 HSDIPAERIIGRKICDVFPALCENSFIRIVKSVFAFGNYASYSQKLHKYLFPMKNPHGSS 93 Query: 353 GDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGAL 412 F + T + + Y+ + V++ + + L A D LT ++NR L Sbjct: 94 ALFPQMQQNCTFGPLRNDNKEISAIYITVQDVTDFVIYEHKLIQMAKVDGLTGVFNRRYL 153 Query: 413 FEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDV 472 + + + + H +P S++ +D+DHFK IND GH GD L + L+ +R D+ Sbjct: 154 DTRLQEELERSRRHGNPLSIMMLDIDHFKEINDTHGHICGDYTLRKISELLLELVRTSDI 213 Query: 473 AGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETG 532 GR GGEEFC ILP S +A +AER R ++ + + R++ S+GV+ + Sbjct: 214 LGRYGGEEFCCILPETSFEQALVLAERCRTQVAASQFSCTDHQS-RVTVSIGVT--DLHR 270 Query: 533 DYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 D + + AD LY AK+ GRNRV +S Sbjct: 271 DDTLDSIIKRADDALYQAKRTGRNRVCSSP 300 >UniRef50_C6P6Y5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y5_9PROT Length = 671 Score = 281 bits (718), Expect = 7e-74, Method: Composition-based stats. Identities = 90/391 (23%), Positives = 162/391 (41%), Gaps = 23/391 (5%) Query: 178 SRAGFYVSTQPTLFTRNVPTRYYGYVT-QPW--FIGHSQRENRHRAVRWFTSQPEHASNT 234 S G + P+ + Y+ V+ P+ F ++ R + + + A + Sbjct: 298 SSTGSPLPRSPSKHELSAREYYWKIVSFTPYATFTEAAEINEVGRDILYGVAYLLLAFGS 357 Query: 235 EPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNP 294 +++ S + + M +++ D L +T +NP Sbjct: 358 -----LAIAFFSLSRKQARVRMEEEEARLREIAVTMSDG------LLVADLEGKITFANP 406 Query: 295 DHPTGNIFDPRELALLAQAME---HDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGV 351 + + E LL + M H G + + S R+ V + Sbjct: 407 E--ACRLLGYSENELLGKDMHGTLHVHGDGKQKEKHECSMLRVARTGETYRAVEEIFRCK 464 Query: 352 RGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGA 411 G IS++++ A+ V ++ + L+ +A D LT L NR Sbjct: 465 NGQLLPISVSVS---AIIREQQAAGIVVAFHDITERKKFEQELERRAQIDALTSLNNRRH 521 Query: 412 LFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQD 471 +E A + + P +++ +D+DHFK IND +GH GD VL + ++R D Sbjct: 522 FYELAEQEILRTKRYGKPLALMMLDVDHFKDINDTYGHHVGDTVLQTLGAVCLQTMREID 581 Query: 472 VAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEET 531 + GR+GGEEF ++LP A+ +A + AER+RL + M + + T+ + S+GV+ Sbjct: 582 IIGRLGGEEFAILLPEATAAQAFDAAERLRLAVAAIAMPLEQGQTLSFTISIGVTGLV-A 640 Query: 532 GDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 D D + AD +Y AK++GRNRV + + Sbjct: 641 KDSDIADMLKRADEAMYQAKRSGRNRVCSQE 671 >UniRef50_C5CYX2 Diguanylate cyclase n=1 Tax=Variovorax paradoxus S110 RepID=C5CYX2_VARPS Length = 534 Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats. Identities = 106/491 (21%), Positives = 180/491 (36%), Gaps = 33/491 (6%) Query: 92 PLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSE----GNLLSRENESL 147 V +E + N R + S A ++E G + E + Sbjct: 53 AALLVMNAWLVVRARTAENEQIARANTNLARAVSQQIDSTAALAEHIISGLVFELERADI 112 Query: 148 DNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPW 207 + L+ + +A + + +Y + + V ++ P + + Sbjct: 113 TPDSLQRLQPVLVNHVAEVQA-IKGIFIYDEQGRWLV------YSDASPAGTRSNSDREY 165 Query: 208 FIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQF 266 FI H R N +S E + VS + D + + GV+ +++ V+ + Sbjct: 166 FIHH--RTNPSARTLISGPIVSRSS-GEWVIPVSRRINDPDGNFAGVVLVTLSVKHLLSV 222 Query: 267 LRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDT---RGGIR 323 L + G L+ + L + G L +A T R I Sbjct: 223 LDH-FQIGEQGAIALFGTDQLLLRRPFREADLGRRSTDTPLQQRFRAARSGTVEGRSAID 281 Query: 324 MDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRM 383 +R +S+E L ++ + E ++ + + L + + ++IR M Sbjct: 282 GVTRIISFEHLLNYPLFVTVAVGKDEALQEWKSASIYQTAWVVLLCLVVGVSGRHLIRSM 341 Query: 384 VSNMY-------------VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPF 430 + L+ A D LT L NR + + Q Sbjct: 342 RRRLVAELQLRSARDALTEANERLEHLAQEDGLTGLANRRYFDARLALNFQQALASQTAL 401 Query: 431 SVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGAS 489 +V+ VD+D FK ND +GH GD L + + S++ R+ D+ R GGEE ++LP Sbjct: 402 AVVMVDVDEFKKYNDLYGHLEGDDCLRRVSQALRSAVWRSSDLVARYGGEEMVLLLPATD 461 Query: 490 LTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYL 549 A EVA+R RL + + ++ A S +S SLGV+S +L AD LYL Sbjct: 462 AAGALEVAQRARLAVADLQIPHAASALGTVSVSLGVASGVPQPGSTPFELLRAADEALYL 521 Query: 550 AKQAGRNRVFA 560 AKQ GRN V Sbjct: 522 AKQEGRNTVRV 532 >UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4SM80_AERS4 Length = 432 Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats. Identities = 83/380 (21%), Positives = 142/380 (37%), Gaps = 22/380 (5%) Query: 187 QPTLFTRNVPTRYYGYVTQPW-FIGHSQRENRHRAVRWFTSQPEHASNTEPQVT--VSVP 243 P T ++ + V+Q + R W + ++T + Sbjct: 61 FPRYITGSIEQPMHDCVSQQTGLESELPIDTLSRTSWWRFILSPIIIPEQSRITRIIVTA 120 Query: 244 VDSNNYWYGVLGMSIPVRTMQQFLRNAIDKN----LDGEYQLYDSKLRFLTSSNPDHPTG 299 +D + + + + + +A D + +L ++ + + + Sbjct: 121 IDITAKKQLEDALKMSRKRFEAVVNSAYDGIISVSSESRIELINTAACEMFGVDESYVGK 180 Query: 300 NIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSIS 359 + L + Y + + G+R D Sbjct: 181 RLETLLPLRFRSN------------HESYFRAFSNSPINSRPMHARASVMGLRRDGSEFP 228 Query: 360 IALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPL 419 +T+ A I R +S L L+ A D LT + NR E + Sbjct: 229 QEVTI--AKINLGQTTEMTAILRDISERARLVEELKVAATTDPLTGIANRRRFDELVKQE 286 Query: 420 AKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGE 479 + CQ H S++ +D+DHFK +ND GHQ GD+ + I+ LR D+ GR GGE Sbjct: 287 VQRCQRFGHTMSLLLLDIDHFKQVNDTHGHQQGDQAILSLVRRIAKQLREVDILGRWGGE 346 Query: 480 EFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQL 539 EF ++LP SL A AERIRL + + + I ++ S+G+S+S+ + + + Sbjct: 347 EFIILLPETSLDLAWASAERIRLAIASESHPLGADIEIPLTVSIGISASQ-GPQDNVDNM 405 Query: 540 QSLADRRLYLAKQAGRNRVF 559 AD LYLAK+ GRN Sbjct: 406 VRRADTALYLAKKQGRNCCI 425 >UniRef50_A4GA83 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4GA83_HERAR Length = 492 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 84/367 (22%), Positives = 149/367 (40%), Gaps = 24/367 (6%) Query: 203 VTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVR 261 ++ + + A+ + ++ V D + + G G+ + + Sbjct: 133 RDTWFYRVRDMQPE-----YETNVDIDMANRDAMTIFINHRVLDYDGNFIGATGVGLTLD 187 Query: 262 TMQQFLRNAIDKNLDGEYQLYDSKLRF-LTSSNPDHPTGNIFDPRELALLAQAMEHDTRG 320 TM L ++ K D+K +T + G I ++ +A+ + + Sbjct: 188 TMTDIL-DSYQKRFHRNIYFTDAKGEIKMTGKSMQDIHGPIAKLPGVSAIAKDILNRDVR 246 Query: 321 GIRMDSR------YVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLL 374 +++ + +S + D L+ +++ VR I + + +L Sbjct: 247 PTQLEYQHNGATILMSSRFIPELDWYLLVEQDITDDVRPIERVFVINIIVSAVATLLILA 306 Query: 375 ISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQ 434 ++ + + R Q L+ A DTLT L NR A + + + P S I Sbjct: 307 LTLFAVNRY-------QRRLEQIAGTDTLTGLLNRQAFEIVFQQAILDSERRRIPLSAIL 359 Query: 435 VDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAA 494 D+D FK +ND GH AGDR+L A + +++R D+ R GGEEF V+L L +A Sbjct: 360 FDIDFFKMVNDNHGHLAGDRILQSIAAITKNAVRESDIVTRWGGEEFLVLLKDCPLEQAT 419 Query: 495 EVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAG 554 +AE+IR + + + S + ++ SLGV+ + AD LY AK G Sbjct: 420 ALAEKIRSMIAGHDFELPASA-LHLTVSLGVAEY--AYRETWLSFFGRADTALYQAKSEG 476 Query: 555 RNRVFAS 561 RNRV S Sbjct: 477 RNRVIVS 483 >UniRef50_D1RSU9 Diguanylate cyclase n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RSU9_SEROD Length = 520 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 86/531 (16%), Positives = 179/531 (33%), Gaps = 38/531 (7%) Query: 56 QRNHLENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWK 115 Q + N + L + + + + + + + E A Sbjct: 5 QPQDADLPRNGKNSPLLFQAGVFVIIVAATLILFNVWQIWNAHQRDLKSAEYESANLARS 64 Query: 116 IELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAM 175 + + T + + ++ R + + N + + Sbjct: 65 LAQHADDTFLQVDSTLSDLT-----ERIQTDGLGQPQQLRLQKLMQGQVGNLPQLHGLFI 119 Query: 176 YVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTE 235 Y S + V++ + + +F H E+ A+ S + Sbjct: 120 YDSHGSWIVTSSGRF------VQGANNADREYFKYHL--EHNSNAIYIGKVVRSR-STGD 170 Query: 236 PQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNP 294 + VS + + + GV+ ++ V +QF + N D L + L Sbjct: 171 LIIPVSRRLNHPDGSFAGVVLATLYVDYFRQFY-DTFALNSDAALSLLLADGTILYRRPY 229 Query: 295 DHPT-----GNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSE 349 + RE+ ++ R + R++ + +++ E Sbjct: 230 SAASIGKNISQGVLFREILPHSEFGNATITSLYDKVERIYGYSRVNRY-PLVITAGLSKE 288 Query: 350 GVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSL--------------Q 395 D+ + S A +LL V+ R +++ ++ L + Sbjct: 289 DALADWRNDSGLFVAGGATLLAILLALGLVLMRQINHSVRTEAELMRTRDQLTSINLRLE 348 Query: 396 WQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRV 455 A D LT L NR + + +++ +D+D+FK ND +GH AGD+ Sbjct: 349 ELALLDGLTGLANRRQFDIALKNELARAARNYRSVALLMLDIDYFKQYNDIYGHVAGDQC 408 Query: 456 LSHAAGLISS-SLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKS 514 L ++ + R+ D+ R GGEE +ILP A A+R+ + E ++ + Sbjct: 409 LQQIGQMLKGLASRSNDIMARYGGEEMSIILPDTDAQGALIFADRVMQAVRELKIPHQGN 468 Query: 515 TTIRISASLGV-SSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 I+ S+G+ + + ++AD LY AK+ G+NR+ ++ A Sbjct: 469 PHGVITLSIGICAKVPHMYNDTPIGFINMADSALYQAKKEGKNRIVCNNAA 519 >UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73713_SYNY3 Length = 970 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 94/470 (20%), Positives = 162/470 (34%), Gaps = 18/470 (3%) Query: 98 LRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGN-LLSRENESLDNEITAALE 156 L + ++Q +L L + G + E R L E Sbjct: 510 LEAGLMRWDQITPPEYKSQDLEAIENLRIYGFTKPWEKEYYHKNGRRVPILMGASPFEGE 569 Query: 157 VGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQREN 216 + + + R + + V R R N Sbjct: 570 PDLTICVVVPMEEQKKALYQRDRIEAELEKLNAKLEQRVLERTQALAESQ---EQVNRVN 626 Query: 217 RHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLD 276 A R E + +S N Y + ++ ++ N+ Sbjct: 627 EQLAQRL----EELKRRNQEMELLST---LNQYLQSCVVVADACASLAALAPPLFP-NIA 678 Query: 277 GEYQLYDSKLRF---LTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWER 333 G ++DS + + + + +F+ + L H G++ S Sbjct: 679 GTISIFDSTANYFEQVKTWGNLACSEPLFNGTDCWALRLGQPHLV--GVQQHDLLCSHLN 736 Query: 334 LDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSS 393 + + + +++G ++ + + L + + L+ Sbjct: 737 PECLPQESLCIPLIAQGETLGLLNLCSDRAGVISSDQQQLAKAVAEQVSLAIANIKLRER 796 Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 L+ Q+ D LT L+NR L + + + H VI D+DHFK ND+ GH AGD Sbjct: 797 LENQSIRDPLTGLFNRRYLEQFFLQEIGRAKRYNHSIGVIMGDIDHFKQFNDQLGHDAGD 856 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 VL ++ S++R D+A R GGEE ++LP SL + AE +R + E+ Sbjct: 857 HVLKTIGRILQSNIRGSDIACRYGGEEMTIVLPQTSLEDTLVKAESLRQAIASMEVEYKG 916 Query: 514 STTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 ++ SLGV+ G+ + ADR LY AK AGRNRV +D Sbjct: 917 KELGTLTVSLGVACYPNHGE-TMVNIIQAADRALYQAKAAGRNRVVMADE 965 >UniRef50_Q48HP3 GGDEF domain protein n=6 Tax=Pseudomonas syringae group RepID=Q48HP3_PSE14 Length = 604 Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats. Identities = 106/482 (21%), Positives = 182/482 (37%), Gaps = 36/482 (7%) Query: 113 AWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVE 172 AW+ RR TL S ++ L + + + + + +E Sbjct: 101 AWQAWTARRNTLENIQTSTINLAGA-LSTYTDGIFKQSELMLIGLTERVERDGAGPEQME 159 Query: 173 QAMYV-----------SRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAV 221 + +V Y + F+ N + +F H Q +A Sbjct: 160 RLRWVIAREMGALPQIDTVSLYNADGICTFSTNPKAIGVNSAQREFFQHHLQ--TPGKAP 217 Query: 222 RWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQ 280 + AS E ++VS + ++ + G++ ++I V + +F + I G Sbjct: 218 FIGPTIRSRAS-GEWVISVSRRINHPDSSFAGLMVVTIGVDHLLKFYSD-IQVGKTGIIS 275 Query: 281 LYDSKLRFLTSSN--PDHPTGNIFDPRELALLAQAMEHDTRGGIRMDS--RYVSWERLDH 336 L + + ++ T+ R+D R+ +++R Sbjct: 276 LTSAAGQLRVRYPHLEVEIGRDLSSTPIFTSERNRPSGTTQFVSRIDGVARFYAFKRSAV 335 Query: 337 FDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMY-------- 388 + V V E + G ++ ++ L ++ + +I + S + Sbjct: 336 YPIVTVVALGQKEAMLDWLGQTKQSILVMLVLLGLVVGLGIRLIGHIHSRIRAEDQLLDS 395 Query: 389 -----VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 L L++ A D LT L NR + K + + S+I +D DHFK Sbjct: 396 QAALIQLNQHLEFIASEDKLTGLANRRRFDQFLEVEFKRARRERSLLSLILIDADHFKRY 455 Query: 444 NDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 ND +GH AGD L A ++ + R DVA R GGEE V+LPG + A +VAE I Sbjct: 456 NDHYGHLAGDECLVALARVVEQCIRRPGDVAARYGGEEIAVVLPGTDESSARQVAENILQ 515 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDY-DFEQLQSLADRRLYLAKQAGRNRVFAS 561 + ++++ S ++ SLGV++ T D L LADR LY AK GRNRV + Sbjct: 516 AIRDEQIEHPASPFGIVTVSLGVATFVGTDRQLDQRSLIELADRALYAAKSQGRNRVNVA 575 Query: 562 DN 563 Sbjct: 576 SE 577 >UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW02_9GAMM Length = 595 Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 104/227 (45%), Gaps = 2/227 (0%) Query: 339 GVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQA 398 G +V L+ + + A + + + ++ S + L+ + Sbjct: 363 GTVVLSAALAVRLNDEKNKRYHAQAEALRVQRESVELLEERVKERTSALREANEKLEKLS 422 Query: 399 WHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSH 458 D+LT L NR +L E K P S + +D+D FKA ND GHQ GD L Sbjct: 423 NTDSLTGLNNRRSLDELLAMEVKRTCRTGAPLSAMMMDIDRFKAFNDTHGHQVGDACLKA 482 Query: 459 AAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTI 517 AG+I+S+ R DV GR GGEEFCV+LP L A +AERIR + + + + Sbjct: 483 VAGVIASTAQRPSDVVGRYGGEEFCVLLPDTPLDGAQIIAERIRAAVENLDFTV-SGQRV 541 Query: 518 RISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 ++ S+GVS + L AD LY AK AGRN V + ++ Sbjct: 542 PVTISIGVSELTYCASDSGKALVEAADEALYSAKSAGRNCVRLALDS 588 >UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7QLL5_CYAP0 Length = 494 Score = 277 bits (708), Expect = 9e-73, Method: Composition-based stats. Identities = 83/313 (26%), Positives = 133/313 (42%), Gaps = 12/313 (3%) Query: 256 MSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFD-----PRELALL 310 MS ++ Q +L + + +N + P Sbjct: 175 MSELLQACQNLEEAYTVISLSSKLLFKELIGSLFVINNSQQVVEQVASWGQPKPSYKQFT 234 Query: 311 AQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGD-FGSISIALTLLWALF 369 Q RG + + S H + ++V + + V G G + T+ L Sbjct: 235 TQDCWCLRRGQTHLMNTAYSELACQHLEPLIVESYCIPLIVEGKPMGIFHLGSTIPGKLT 294 Query: 370 TTMLLISWYVIRRMVSNMY--VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQ 427 L++ V R + + L +L+ Q D LT LYNR L E + + + + Sbjct: 295 EVKQLLATNVTRHISLALANIKLCETLKQQNIRDALTGLYNRRYLEESLKKELERAKRKE 354 Query: 428 HPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPG 487 +I +D+DHFK +ND FGH GD+VL G + +R D+A R GGEE +ILP Sbjct: 355 RSLGIIMIDVDHFKNVNDTFGHDKGDQVLKKLGGFLQRHIRGSDIACRYGGEELTLILPE 414 Query: 488 ASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRL 547 ASL + AE++R + ++ + T ++ S+G++ E G Y + L AD+ L Sbjct: 415 ASLENTRQRAEQLRQAVKNLDLDLCDHT---LTISVGIACFPEHG-YSGKALLKTADQAL 470 Query: 548 YLAKQAGRNRVFA 560 Y AKQ GR+RV Sbjct: 471 YQAKQQGRDRVIC 483 >UniRef50_UPI0001C3940A response regulator receiver modulated diguanylate cyclase n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C3940A Length = 392 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 88/369 (23%), Positives = 143/369 (38%), Gaps = 10/369 (2%) Query: 202 YVTQPWFIGH-SQRENRHRAVRWFTSQPEHASNT-EPQVTVSVPVDSNNYWYGVL---GM 256 Y+T+P+ R N + Q E + + + Q+ +S + ++ + Sbjct: 1 YITKPFHNSEVLIRVNTQLRLYQLQKQLELQNQSLQEQIRLSQ-IYLHDRQVAEATSKLL 59 Query: 257 SIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEH 316 + Q + D + LT G+ + Q Sbjct: 60 EKAIAATQNGVVITDPNQPDNPIIYVNFGFERLTGYPAHEILGSNCRFLQGNERDQPALD 119 Query: 317 DTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLIS 376 D R I + DG + VR + G ++ + + + S Sbjct: 120 DIRRAIAEAEECRVILKNYRRDGTMFWNELFISPVRNEQGELTNFIGIQTDVTERK--KS 177 Query: 377 WYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVD 436 + R + LQ A +D LT++ NR E C Q P ++I D Sbjct: 178 EEALERSRIALKKTNQELQRLALYDDLTQVANRRRFNEYLAYNWHRCSREQEPIALILCD 237 Query: 437 LDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAE 495 +D+FK ND FGHQAGD L A IS ++ R+ D+ R GGEEF +ILP + A + Sbjct: 238 VDYFKPYNDTFGHQAGDDCLHKIARAISGAIQRSVDLVARYGGEEFAIILPNTPINGAVK 297 Query: 496 VAERIRLKLNEKEMLIAKSTTIR-ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAG 554 VAERIR ++ + S + ++ SLGV+ + + L + AD LY AK G Sbjct: 298 VAERIRKQVENLRVPHPGSQSSDYVTVSLGVACKIPHSELSVDSLIAQADEALYQAKNQG 357 Query: 555 RNRVFASDN 563 RN +++ Sbjct: 358 RNCTVIAES 366 >UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ4_CARHZ Length = 668 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 65/182 (35%), Positives = 96/182 (52%), Gaps = 6/182 (3%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 ++ L+ L + D LT+ YNR E + + + PF++I +D+DHFK Sbjct: 490 DLTERKKLEEQLYRLSITDYLTQAYNRRYFTEMLEREIERAKRTKMPFALIMLDIDHFKN 549 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 +NDRFGH AGD VL A LI + +R D R GGEEF ++LP + +AA +AE +R Sbjct: 550 VNDRFGHAAGDLVLKTLANLIKNRIRQTDCLARWGGEEFVILLPNTPVEKAAGLAEELRE 609 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 +L+ E+ R++AS GV+ + L AD+ LY AK +GRN V S+ Sbjct: 610 QLSMLEIP----GVGRVTASFGVTGYCPG--DTLDTLLMRADQMLYTAKASGRNCVRFSE 663 Query: 563 NA 564 Sbjct: 664 KC 665 >UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YVG8_9CYAN Length = 329 Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 81/307 (26%), Positives = 134/307 (43%), Gaps = 11/307 (3%) Query: 264 QQFLRNAIDKNLDGEYQLYD---SKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRG 320 Q FL +D L D +T + E L+ + Sbjct: 6 QNFLVLVVDDITRNLQVLADMLEQVGYEVTFATDGQQALERAKVAEPDLILLDLMMPKMN 65 Query: 321 GIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDF--GSISIALTLLWALFTTMLLISWY 378 G+ + + + E+L + + E + F G++ +A + Sbjct: 66 GLEVCQKLKNDEKLCEIPVIFLTASEEKEHLLEAFKQGAVDYITKPFYAPELLARVRVHL 125 Query: 379 VIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLD 438 ++ + ++ + QA D LT ++NR L + + + FS+I +D+D Sbjct: 126 ELKYTKDELNKKSAAFEKQAITDPLTGIFNRRHLMSISEIEYQKAVNYNRLFSIIMLDID 185 Query: 439 HFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 HFK +ND +GH GD+VL + + LR DV GR GGEEF +ILPGA L A ++AE Sbjct: 186 HFKKVNDTYGHIVGDQVLKRMTQEVQNLLREGDVCGRFGGEEFAIILPGADLKIALKIAE 245 Query: 499 RIRLKLNEKEMLIAKSTT-----IRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 R+R + + + I S + I+I+ SLGV++ D +++ AD LY AK Sbjct: 246 RLRQAIADFYIPIYDSNSSSNLKIKITISLGVTTY-HIDDDKLDKMWRRADDALYQAKAK 304 Query: 554 GRNRVFA 560 GRN+V + Sbjct: 305 GRNQVCS 311 >UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384142 Length = 445 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 91/310 (29%), Positives = 138/310 (44%), Gaps = 22/310 (7%) Query: 256 MSIPVRTMQQFLRNAID----KNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLA 311 + + +R + + ++ + ++ G + + K +T P+ G + L Sbjct: 153 IEMELRKLTSAVEHSPNLVLITDIAGRIEYVNRKFTAVTGWQPEEVIGKTTSLFKSGLTP 212 Query: 312 QAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTT 371 + D I + DG L VR T Sbjct: 213 PSTYQDLWRTILDGGEWHGEFCNRRKDGSLYWEKCSIAPVRS----------------PT 256 Query: 372 MLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFS 431 LL + ++ V+ LQ L A D+LT + NR E+A + P + Sbjct: 257 GLLTHFVALKEDVTETKRLQEELTRLASQDSLTGIANRRHFLERAHTEIIRAGRAKTPLA 316 Query: 432 VIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLT 491 V+ +D+DHFK IND +GH AGD L A S+LR D+ GR+GGEEF ++ PG L Sbjct: 317 VLMLDVDHFKKINDEYGHAAGDAALKALADTCRSTLRETDLFGRLGGEEFGILFPGDDLN 376 Query: 492 EAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAK 551 A E AER+RL + ++ I TI I+ASLG+S + G+ + S AD+ LY+AK Sbjct: 377 AATEAAERLRLAIAATKITIG-GATIAITASLGLSLLQ-DGEKSIDAALSRADQALYVAK 434 Query: 552 QAGRNRVFAS 561 QAGRNR+ S Sbjct: 435 QAGRNRLEIS 444 >UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8W1_MAGSM Length = 564 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 83/314 (26%), Positives = 131/314 (41%), Gaps = 35/314 (11%) Query: 255 GMSIPVRTMQQFLRNA----IDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALL 310 G+ +Q +R+A I N DG+ L + + D G F + + Sbjct: 277 GLESEQNKLQTIIRSAKEGMIVTNPDGDVVLVNPSAERILGKTDDEIRGEGF-FQLIDDP 335 Query: 311 AQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFT 370 GG M V +R+ + ++ D G Sbjct: 336 DYIRTFLETGGFEMPETVVYKQRVLNLY---------VRSIKDDHGEP------------ 374 Query: 371 TMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPF 430 I + V++ L+ L+ + D LT+L NR + E K + Sbjct: 375 ----IGSAALILDVTDEKRLEQQLRELSTTDGLTKLINRRRMDELLDEELKRAVRYGLNL 430 Query: 431 SVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASL 490 S++ +D+DHFK ND +GH+ GD VL A + S R D R GGEEF VILP Sbjct: 431 SILLLDVDHFKKFNDTYGHEQGDHVLIALAAEMKSYFRNIDYPCRYGGEEFFVILPNTDA 490 Query: 491 TEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLA 550 A +VA+R+R ++ EKE+ +R++ S+GV+S + + + AD LY+A Sbjct: 491 DGAIKVADRLRERVAEKEV-----DGLRVTISIGVASYPDLSITRPDAMVRAADSALYVA 545 Query: 551 KQAGRNRVFASDNA 564 K+ GRN+V + A Sbjct: 546 KEQGRNKVVYASEA 559 >UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA9_METML Length = 548 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 1/187 (0%) Query: 375 ISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQ 434 I + + + +L+ L +A D LT L NRG E+A Q +Q ++ Sbjct: 362 IRMIGVHANIHSRKLLELELNQKAHIDYLTELNNRGHFMEQAEKELSRSQRYQKDMAMFM 421 Query: 435 VDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAA 494 +D+D FK IND GH+ GD VL A + +LR D+ GR+GGEEF ++LP + EA Sbjct: 422 MDIDFFKKINDSHGHKIGDIVLKKLADVCRQTLREVDIIGRIGGEEFAILLPETNRAEAL 481 Query: 495 EVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAG 554 EVAER+RL + + ++ + ++ + S+GVSS + D + + L S AD+ LY AKQ+G Sbjct: 482 EVAERLRLAVADSKVPMKDGLPVQYTVSIGVSSV-ASADDNIDMLLSRADQALYQAKQSG 540 Query: 555 RNRVFAS 561 RNRV A+ Sbjct: 541 RNRVCAA 547 >UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M6_MAGSA Length = 498 Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats. Identities = 99/438 (22%), Positives = 163/438 (37%), Gaps = 25/438 (5%) Query: 134 VSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTR 193 V LD E L G L + + ++Y S F + L Sbjct: 78 VIGQTGPEVLRPRLDPERGRQLN-GMLAEKTASVPRLTGISIYNSDCVFVAAADTRLLG- 135 Query: 194 NVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSV-PVDSNNYWYG 252 + +P E E +++ P + VS + ++ G Sbjct: 136 -FRSNQKSCAERP--------EALTDKTYIQYVPAEKSASRRPVILVSRHLLSADGKLLG 186 Query: 253 VLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSN--PDHPTGNIFDPRELALL 310 +I + Q ++ + ++ + D L + P P Sbjct: 187 GALAAIDLSHAQDWISSFTVED-RDVLAIVDGDGVLLARNPELPAVIGTRTPQPTGQPSF 245 Query: 311 AQAMEHDTR---GGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWA 367 + + + R +L++ +++ V G+ ++ + L + Sbjct: 246 GEQRSSASFVAVSPLDGRERIFGLSKLENI-PLILMVGYDLAGILTEWSKRAGQLAAGFL 304 Query: 368 LFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQ 427 L + + V L+ QA D LT + NR L A + Sbjct: 305 LLVALATLGLRSYLTTVRQR----EELRRQADTDPLTGVPNRRHLMSVAEHELARTLRYG 360 Query: 428 HPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPG 487 ++ VD+DHFKAIND +GH GDRV+ A +++S R QD AGR+GGEEF +LP Sbjct: 361 GALALFMVDIDHFKAINDTWGHPTGDRVIQVLAAAMAASAREQDTAGRLGGEEFAAVLPE 420 Query: 488 ASLTEAAEVAERIRLKLNEKEMLIAK-STTIRISASLGVSSSEETGDYDFEQLQSLADRR 546 L AA +AER+R + + +R + S+GV++ + GD E + ADR Sbjct: 421 TDLEGAAIMAERLREAVEAITSALDDQGQPVRFTVSIGVAAIQL-GDGSVEDILGRADRA 479 Query: 547 LYLAKQAGRNRVFASDNA 564 LY AK GRNRV + A Sbjct: 480 LYAAKHGGRNRVEMAATA 497 >UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRM4_PSYIN Length = 1078 Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats. Identities = 74/333 (22%), Positives = 126/333 (37%), Gaps = 19/333 (5%) Query: 228 PEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLR 287 P + + Q D + + L A D L D + R Sbjct: 764 PLFSDDGIFQGFFGTEHDITERKQAKEALEESEYKFRTILDVAADG-----VCLVDKQTR 818 Query: 288 FLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTL 347 N + EL L H + ++ + G ++ V + Sbjct: 819 KFIQGNNAICKMLGYRDDELYELGIEDIHPAEALAEVFLQFNKKRQ-----GEIIVVPNI 873 Query: 348 SEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLY 407 V+ GSI +A A+ I V+ ++ ++ A D+LT + Sbjct: 874 P--VKRKNGSIFLADISSAAIILDGRTIM-VGFFHDVTERKKVEEEIKLLATTDSLTGIA 930 Query: 408 NRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL 467 NR A + + P S++ D+D+FK +ND FGH AGD VL + L+ ++ Sbjct: 931 NRRAFSTHLASELERSNRYGTPLSLVMFDIDYFKKVNDNFGHDAGDDVLQALSELVKRNI 990 Query: 468 RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSS 527 RA D+ R GGEEF +++P + ++ A E++R ++++ ++ S G++ Sbjct: 991 RAVDIVARWGGEEFMLLMPESDISAATAAIEKLRREISDFPF----GQVGSLTVSFGITV 1046 Query: 528 SEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 D D LY AK+ GRNRV Sbjct: 1047 FVLNEDSKV--FLKRVDDALYQAKEKGRNRVEI 1077 >UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SA57_CHRVI Length = 434 Score = 273 bits (699), Expect = 9e-72, Method: Composition-based stats. Identities = 82/354 (23%), Positives = 141/354 (39%), Gaps = 12/354 (3%) Query: 209 IGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLR 268 I H + + + S + ++ S+ DS V + Sbjct: 83 ITHIPQRDSAGTLVQIQSLGRDITQRHQRIEQSLR-DSQRQLADV---------IDFLPD 132 Query: 269 NAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRY 328 + + D +++ + LT P+ G + + + D+ Sbjct: 133 ALLAIDRDKRVIIWNKAVAKLTGIPPEAMLGRGDYAYTVPFYGERRPQLMDLVFQSDTDL 192 Query: 329 VSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMY 388 +G + + G+ I + ++ I R +++ Sbjct: 193 ERRYAHVTREGDTLTAEGFCNALHDGHGA-WILARVAPLRDAAGQVVGAMEIIRDITDSK 251 Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 L+ L+ D LT+L+NR F A + + HP ++ +D+DHFK++NDR+G Sbjct: 252 RLEEDLRQLTRLDPLTQLFNRRYFFTLAEQEYQRFLRYHHPMALCMIDIDHFKSVNDRYG 311 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H GD VL A + +LR D+ R GGEEF ++LP L A ER+R+ + E+ Sbjct: 312 HLVGDTVLCIVAQTLHDNLRQVDILARYGGEEFVILLPETDLQTACASTERLRVAVAERR 371 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + + ++ SLGV + + E+L AD+ LY AKQAGRNRV D Sbjct: 372 IETPSG-PVSVTLSLGVVAIADGPAMTLERLLDAADQMLYRAKQAGRNRVEIWD 424 >UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMG8_DESAA Length = 417 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 70/230 (30%), Positives = 117/230 (50%), Gaps = 4/230 (1%) Query: 335 DHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSL 394 G + +++ + IA L A+ ++L + W ++ R+ + ++ Sbjct: 184 GEVRGGISVELDVTDIYSQIRANTLIASGLTAAISLSLLSMIWILVSRLARRLTKAYETI 243 Query: 395 QWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDR 454 + + D LTRL+NR + + P S++ +D+DHFK +ND +GHQAGD Sbjct: 244 EVMSITDELTRLHNRRHFETRLAEEISRSLRYGSPMSLMILDIDHFKRVNDNYGHQAGDW 303 Query: 455 VLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKS 514 VL+ A L+ ++R DV R GGEEF VIL +++++A AE++R + E I Sbjct: 304 VLTQFATLLKDNVRKADVPARWGGEEFVVILTESTISQARMAAEKVRRNVESAEFNIPDG 363 Query: 515 TTIRISASLGVSSSE----ETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 +I ++ S+GV+S + + + + L AD LY AKQ GRNR A Sbjct: 364 RSIPVTVSVGVASLDMISGDEMGSEADVLVKTADDALYRAKQEGRNRTVA 413 >UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GCU4_GEOUR Length = 422 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 75/234 (32%), Positives = 115/234 (49%), Gaps = 2/234 (0%) Query: 327 RYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSN 386 ++ G L + +R + + +L I++++ R+V N Sbjct: 190 HRSQGYKIGSVMGALSVTIPVVTLIRETDTDKLMIVAATIGTIGLLLGITYFLTWRLVLN 249 Query: 387 MYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDR 446 + + Q L+ A D LT L NR + ++ + P +I +DLDHFK IND Sbjct: 250 LDMAQKHLKRLASTDELTGLKNRRQIMKRLDEEYQRAIRLGEPLCLIMLDLDHFKKINDT 309 Query: 447 FGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNE 506 +GH GD VL AG + +LR DV GR+GGEEF ++ PG + EA +A+R+R + Sbjct: 310 YGHPFGDLVLKCVAGHMKKALRRYDVLGRIGGEEFLIVSPGTTREEAVVLAQRLRSTVEM 369 Query: 507 KEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 +++ + I+ S GV+ GD + E L AD LY+AKQ GRNRV A Sbjct: 370 EKIAYED-KKVTITVSCGVA-FLYKGDDNVEILLKRADSALYIAKQEGRNRVVA 421 >UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW3_9GAMM Length = 791 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 89/420 (21%), Positives = 150/420 (35%), Gaps = 38/420 (9%) Query: 149 NEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWF 208 +EI + EV + + + + F + P R F Sbjct: 405 HEIRWSDEVYRIFGMERSRWE-------GTHGAFMQAVHPGDRERVQAAVDRALAGLEQF 457 Query: 209 IGHSQRENRHRAVRWFT--SQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQF 266 + R + E + P V D ++ + R + Sbjct: 458 DVTHRILRPDGTERVVRELASVELSPCGTPARMVGTVQDITEQYH----LEQEQRLLAAT 513 Query: 267 LRNA---IDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIR 323 ++ +++G Q ++ LT + G + + +R Sbjct: 514 FESSQAIFITDVEGTIQRVNATFTQLTGYTEEEAVGANPRILNSGRQDRDFYQEMFRTVR 573 Query: 324 MDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRM 383 + +G + +H + + D G I + + Sbjct: 574 ETGHWQGEIWNRRKNGEIFPLHEVVTAIHDDQGEIEYYIAMF----------------HD 617 Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 ++ L+++L+ QA++D LT NRG A+ Q + HP S++ +D+DHFK I Sbjct: 618 ITRQKELEAALEHQAFYDPLTDAANRGYFETLLDQEARRAQRYAHPCSLLLLDIDHFKRI 677 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND FGH+ GD VL + LR DV GR GGEEF V+LPG VAE++R + Sbjct: 678 NDTFGHEVGDEVLRFLVHALKGRLREADVLGRWGGEEFVVLLPGTDAERGQHVAEQLREQ 737 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 + ++ SLGV+ AD +Y+AK+ GRNRV D+ Sbjct: 738 VTATAFPCVG----LVTISLGVAECRPG--ESIRDWVKRADEAMYVAKKGGRNRVVRLDD 791 >UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P7Y3_AZOSE Length = 313 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 83/294 (28%), Positives = 129/294 (43%), Gaps = 14/294 (4%) Query: 271 IDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVS 330 I + G Q ++ + + + G P + + R Sbjct: 34 ITIDEHGTIQSFNLCAERMFGRSAESMIGQKLHPIIPERYRRLHDDGVSRVSRSGETPFD 93 Query: 331 WERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVL 390 E +R D I LT + + F +S+ I R ++ L Sbjct: 94 GE------------TREFHALRKDGSEFPIELT-VASWFGEDRRLSFIGIIRDITERKRL 140 Query: 391 QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ 450 ++ L+ A D LT + NR E +HP ++I +D+D FK IND FGH Sbjct: 141 EAELRQLATTDPLTGILNRRRFTELTTQEIHRAHRLRHPLTLIMLDIDWFKRINDAFGHT 200 Query: 451 AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEML 510 GDRV+ A +S LR D+ GR+GGEEF V+LP + + EVAER+R K+ ++ Sbjct: 201 VGDRVIQSLASACASELREIDILGRLGGEEFAVVLPELGASGSLEVAERLRQKVEGLQIT 260 Query: 511 IAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 + +R + SLGV+ ++T D + L AD LY AK+ GRN V A+ ++ Sbjct: 261 LNDGRIVRFTCSLGVAVLKDT-DQSPDTLLVRADNALYRAKRDGRNCVRAASDS 313 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 65/178 (36%), Positives = 91/178 (51%), Gaps = 6/178 (3%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 ++ L L Q+ D LT +YNR L K KL + H P S+I D+D FK Sbjct: 600 DITKEKELSDMLLKQSTEDPLTGIYNRRYLENKLEEYVKLAKRHDRPLSLIMFDIDFFKH 659 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 IND FGH GD+VL A ++S ++R D+ R GGEEF +I P + +A +AE++R Sbjct: 660 INDSFGHDVGDKVLKAIAKVVSENIRNTDIFARYGGEEFVIIAPETTKEDAKILAEKLRS 719 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + I ++ S GV+S E+ E L AD LY AK+ GRN+V Sbjct: 720 LIRNLHFEEG----INVTCSFGVASLEKH--DTKETLLKRADEALYEAKKTGRNKVVV 771 >UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6Y7_GEOLS Length = 459 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 3/230 (1%) Query: 333 RLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQS 392 ++ G + + E V + + + +L + + R + + Q Sbjct: 226 KVGDIRGGISVSIPMKEVVAKMRMNRLLTAASAVLVLGLLLGLLAVINNRFLKELREAQE 285 Query: 393 SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAG 452 L A D+LT L NR A E+ Q + F+ + +D+D FK IND +GHQAG Sbjct: 286 KLVEMATIDSLTGLLNRRAGLERVEEELSRHQRSERAFACLLLDIDRFKKINDTYGHQAG 345 Query: 453 DRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA 512 D VLS + +R D+ R GGEEF ++LP S + A AE+IR ++ A Sbjct: 346 DAVLSEFGATLRRHVRKHDIVCRYGGEEFLLLLPDTSPSAARTTAEKIRAVTAATPIMFA 405 Query: 513 KSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 I ++ S+G+S + GD + + + AD LY AK +GRNRV ++ Sbjct: 406 -GRQIAVTTSIGISMMQ--GDETAKAMIARADAALYEAKNSGRNRVVCAE 452 >UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X5B9_DESRD Length = 578 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 100/495 (20%), Positives = 170/495 (34%), Gaps = 42/495 (8%) Query: 98 LRDAVTEFEQHRDEHAWKIELNRRRTLPVNG---VSDALVSEGNLLSRENESLDNEITAA 154 R + + E + + V+G V+D + + + A Sbjct: 95 SRQLLDQQPVVTTETVRFTKSGTPVQVRVSGAPIVTDGTLHGIVAVYTDISERIATEDAL 154 Query: 155 LEVGYLLRLAHNSSSMVE--------------QAMYVSRAGFYVSTQPT--LFTRNVPTR 198 E AH + + +RA +P L T Sbjct: 155 REQKRAAEQAHGQWQRTFDAVPDLIALIDTDHRIIRTNRAMAERLGRPAAELTGCACHTV 214 Query: 199 YYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGM-- 256 + T P F HSQ + + E + +TV+ D+ G + + Sbjct: 215 VHNRETPPAFCPHSQLLDEGDSS--PVEITEDNLGGDFLITVTPLHDAEGRLLGSVHIAR 272 Query: 257 --------SIPVRTMQQFLRNAIDKNLDGEYQLY--DSKLRFLTSSNPDHPTGNIFDPRE 306 + M + D + + + +N H + + Sbjct: 273 DITKRKRDEKRLAKMSKEFEQVFHGTQDAMFLIAVEEEGGFRFIRTNKAHQRATGLELKT 332 Query: 307 LALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLW 366 + G ++ + Y E + G+ T L Sbjct: 333 VRGKTPLELLGEEAGAQVSANYQRCVDAGAPLSY-------EEELVLPGGTRVW-HTTLT 384 Query: 367 ALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTH 426 ++ + S + ++ + L++ A D LT LYNR E + + + Sbjct: 385 PVYEEERITSIVGSAQDITERKRAEEHLRYLATTDELTGLYNRRHFMEILDTEIERAKRY 444 Query: 427 QHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILP 486 + ++I +D+DHFK IND GH GD L H A + + R D GR+GGEEF +I P Sbjct: 445 EQSLALISLDIDHFKTINDTHGHAVGDAALEHLAAQLLACKRQPDSLGRLGGEEFALIAP 504 Query: 487 GASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRR 546 A E+AERIR +L + + +ST++ + SLGV++ + + L AD Sbjct: 505 HTDRAGATELAERIRSELERTPIEL-ESTSLHPTISLGVTALNIQDNDTIDALLKRADDA 563 Query: 547 LYLAKQAGRNRVFAS 561 LY AK+ GRNR S Sbjct: 564 LYEAKRTGRNRTVTS 578 >UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1TWP6_MARAV Length = 565 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 2/224 (0%) Query: 340 VLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAW 399 V++ L+ + + A + L +R + L+ + Sbjct: 332 VILLSFALAYRINMERRRRQQAQEHALDIQRQANLTLESRVRERTEELEQANEQLRAISL 391 Query: 400 HDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHA 459 D LT + NR EK H+H S+I +D+DHFK +NDRFGH GD L Sbjct: 392 TDGLTHVANRRRFDEKLETEWNRALRHEHELSLILLDIDHFKQVNDRFGHLVGDDCLVAL 451 Query: 460 AGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKS-TTI 517 A ++S + R+ D+ R GGEEF ++LP + A +VAER+RL + + + + + Sbjct: 452 ASILSDEVQRSGDLVARYGGEEFAILLPTTDVAGAQQVAERMRLSVARTPVNSGEHMSPV 511 Query: 518 RISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 ++ SLGV++ D ++L AD LY AK GRNRV Sbjct: 512 SLTISLGVATLTPNRQSDCQELIRRADEALYAAKSDGRNRVVVW 555 >UniRef50_Q2BLU7 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLU7_9GAMM Length = 477 Score = 271 bits (692), Expect = 6e-71, Method: Composition-based stats. Identities = 105/480 (21%), Positives = 190/480 (39%), Gaps = 28/480 (5%) Query: 88 ALVAPLDFTSLRDAVTEFEQHRDEHAWK--IELNRRRTLPVNGVSDALVSEGNLLSRENE 145 A+ A + F R A E + I +R L + + + L ++ Sbjct: 20 AITATVSFVISRQAALEAMVQHELPLTSDNIYAEVQRDLILPRTVSSFMGNDTFL--QDW 77 Query: 146 SLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQ 205 L+ E A YL + + + +Y + R + Sbjct: 78 ILEGETDIAAVTRYLNGIKQKYGAFTAFMVSEKSGNYYHAGGWLKQVSKTDPR-----DE 132 Query: 206 PWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVD-SNNYWYGVLGMSIPVRTMQ 264 +F E P+ A+ + ++ + + + G G+ + + +++ Sbjct: 133 WYFRVRLMEEES-----ELNIDPDMANKDALTIFINYKIHGPDGEFIGATGLGLNLESIK 187 Query: 265 QFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGI-- 322 L + L N+ + + Q++ + +G Sbjct: 188 SILSE-YRERYSNNVYFVTRLGNVLLHDEQHQVAENLSQEPGMKEIVQSILTEPQGSFSY 246 Query: 323 -RMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIR 381 R Y+ R G+++ V E V I ++ L T ++L + Sbjct: 247 QRHGKTYLLNTRHIEELGLILCVEAEEEKVFDALRPSLIVTAIVCILVTLIVLALLLRVI 306 Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 R Q+ L+ AW D LT L NR A ++ + Q + P S++ VD+DHFK Sbjct: 307 R------HYQAELEGIAWRDPLTSLLNRRAFIDRYAAIRNQHQRNGQPLSLLLVDIDHFK 360 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 INDR+GH AGD VL + +++ ++R D+ R GG+EF ++L G A ++AERIR Sbjct: 361 EINDRYGHNAGDLVLKGISEILTEAVRPSDLVTRWGGDEFLLLLSGTDSDNARDIAERIR 420 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 +++ + L A S R++ S+GV+ + D+D ++ AD LY AK+AGR+R + Sbjct: 421 TRISLEPDLAAISEQ-RLTVSIGVAEQRD--DFDLDRHVQEADSGLYRAKKAGRDRAELA 477 >UniRef50_Q1H013 Diguanylate cyclase (GGDEF domain) n=2 Tax=Methylophilaceae RepID=Q1H013_METFK Length = 487 Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 91/377 (24%), Positives = 154/377 (40%), Gaps = 23/377 (6%) Query: 198 RYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGM 256 R ++ + + A + ++ V D +N + G +G+ Sbjct: 124 RPNEERDAWYYRVRDMQV-----PYEINVDRDMAHADALTIFINYRVLDYDNQYLGAVGV 178 Query: 257 SIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEH 316 + V ++Q+ + + D+ Y + S L L+ S NI LA + Q + + Sbjct: 179 GLTVDSVQKLISHYQDRFRRDVYFVDSSGLIRLSGSKHQVVGQNINQQPALAGIFQQVLN 238 Query: 317 DTRGGIRMDS---------RYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWA 367 + I S + ++ + L E ++ + L L Sbjct: 239 TAKDDIHGGSFQYEDAETKQLINIRYIPELQWYLFVGQDELEATSDIRQALQLNLLLCLV 298 Query: 368 LFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQ 427 + ++ ++ +RR Q L+ A DTLT L NR A + + Sbjct: 299 VTAIVVALTHVALRRY-------QDKLETMATTDTLTGLPNRRAFDVVIDVFLNENERAR 351 Query: 428 HPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPG 487 + I +D+DHFK+INDR GH GD VL+ A +I + RA D R GGEEF + + Sbjct: 352 STLAFILLDVDHFKSINDRLGHLGGDYVLTVVARIIKGNTRAADFICRWGGEEFLIAIKD 411 Query: 488 ASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRL 547 A +AE+IR + E++ + + + I+ASLGV E + AD+ + Sbjct: 412 CDEHNALLLAEKIRSAIEN-ELIAYQGSQVAITASLGVGVGVARAGEKLEPVLERADKAM 470 Query: 548 YLAKQAGRNRVFASDNA 564 Y AK AGRN+V D+A Sbjct: 471 YAAKAAGRNQVQLGDSA 487 >UniRef50_B7K273 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Cyanobacteria RepID=B7K273_CYAP8 Length = 308 Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats. Identities = 75/297 (25%), Positives = 132/297 (44%), Gaps = 4/297 (1%) Query: 266 FLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMD 325 + + I KN+ ++ D+ T + + L+ + G+ + Sbjct: 12 LVVDDISKNVQLLIEILDTVGYATTFAIGGKQALERVKSVKPDLILLDLMMPEINGLEVC 71 Query: 326 SRYVSWERLDHFDGVLVRVHTLSEGVRGDF--GSISIALTLLWALFTTMLLISWYVIRRM 383 S E + + + E + F G++ + + ++++ Sbjct: 72 KILKSDEATANIPILFLTASNDKEHLIKAFEQGAVDYVTKPFKVPELLARVKTHVELKQV 131 Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 + +++ A D LT + NR L E A+ + + PF ++ +D+DHFK I Sbjct: 132 QKQLQEACQTMKKLADTDELTGIANRRCLLEFAQREFQRSLRYGTPFCLLMIDVDHFKNI 191 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND++GH GD+ + +I LR D GR GGEEF V+LP +L A EVAERIR Sbjct: 192 NDKYGHPNGDKAIQWVVEIIKLGLREVDFFGRFGGEEFIVVLPQTALGGALEVAERIREA 251 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + + + + + T+ ++AS+GV++ D + AD+ LY AK GRN+V A Sbjct: 252 IASQPLTL-EQDTVTLTASIGVATY-TGEDKTVVGMIQRADKSLYQAKAKGRNQVIA 306 >UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5N6_ALHEH Length = 419 Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats. Identities = 83/380 (21%), Positives = 140/380 (36%), Gaps = 26/380 (6%) Query: 184 VSTQPTLFTRNVPTRYYGYVTQPWFIG---HSQRENRHRAVRWFTSQPEHASNTEPQVTV 240 + + T F G + +++ R V W S P + + Sbjct: 60 ILQGAATDPAVLRTLRQRLAAGQGFEGSAINYRKDGRPYHVEWLIS-PVRDDSGRITAWL 118 Query: 241 SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGN 300 S+ D + + ++ + + + +G + +T D G Sbjct: 119 SIQRDVTHERELEQEARLLSTAVESSAASILITDTEGCIVYVNRGFEQITGYRRDEVLGE 178 Query: 301 IFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI 360 + D + + + G L + VR D G + Sbjct: 179 TPAVLNSGEQSARFYRDLWTTLERGETFRGTFLNRNRSGALFYLEQSITPVRADQGQV-- 236 Query: 361 ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA 420 + + + ++ ++ L+ A D LT L NR + + Sbjct: 237 --------------VRYVATGKDITERVRMEEELKRAATTDALTGLANRLSFEQLLERDY 282 Query: 421 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 + C+ + S++ DLDHFKA+ND GH+AGD VL AGL+ +++R D R GGEE Sbjct: 283 ERCRRYGGALSLLMFDLDHFKAVNDAHGHEAGDAVLQALAGLVLANVRTADTVARWGGEE 342 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 540 F V+LP L A E+AE++R ++ ++AS GV + + D L Sbjct: 343 FMVLLPETPLAAAGELAEKLRERVAAHRFPHGA----PVTASFGVCALRD--DDTCRTLV 396 Query: 541 SLADRRLYLAKQAGRNRVFA 560 AD LY AK GR+RV Sbjct: 397 RRADEALYRAKHLGRDRVEC 416 >UniRef50_A4XX59 Diguanylate cyclase n=1 Tax=Pseudomonas mendocina ymp RepID=A4XX59_PSEMY Length = 518 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 98/487 (20%), Positives = 179/487 (36%), Gaps = 41/487 (8%) Query: 112 HAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMV 171 AW+I +R R + V++ + + L + + +++ ++ A + Sbjct: 23 TAWQIWFSRERAIRELNVANLNLVQA-LDNYTEGVIRQSELVLIDLSERVQGADLAPQEQ 81 Query: 172 EQAMYVSRAGFYVSTQ------------PTLFTRNVPTRYYGYVTQPWFIGHSQRENRHR 219 E+ + + V L + + P + +FI H R + Sbjct: 82 ERIKTLLQRQTQVLGLANAIVVYDAQGDRLLASSSAPHSGLNAADRAFFIHH--RNDPST 139 Query: 220 AVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGE 278 + + + + TVS + D++ + G + +++ V F ++ G Sbjct: 140 DIFIGPTIKSRIT-GDWVFTVSRRLNDADGRFAGAVAVTLGVEHFLHFYG-GLNLGEHGS 197 Query: 279 YQLYDSKLRFLTSSNPDH--PTGNIFDPRELALLAQAMEHDTRGGIRMD--SRYVSWERL 334 L S L + D L +L + E + R+D R ++ R Sbjct: 198 MSLSSSDGLLLFRQPFREQDVGLDWSDSPVLQILREKNEGTSIQTSRIDGLERLYAFRRN 257 Query: 335 DHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSL 394 +H ++ + + + + L L + I + + ++ L Sbjct: 258 EHL-PLITVIAVSRDEALAAWRRDAELFAALILLLLLAIGIIGQRLILDIRRRSRMEQQL 316 Query: 395 --------------QWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHF 440 + A D LT L NR + + + Q P S++ +D+D F Sbjct: 317 LNAREELLDANARLEVLASQDALTGLANRRSFDQTLEVEIRRAQRRGSPLSLMLLDIDLF 376 Query: 441 KAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 K NDR+GH AGD L A ++ + R D+A R GGEE VILP + A VA Sbjct: 377 KRYNDRYGHVAGDACLRAVADVLRQCMRRPGDLAARYGGEELAVILPNVDIEGAQTVART 436 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQ---LQSLADRRLYLAKQAGRN 556 L ++ + S R++ S GV+S Q L AD+ LY AK GRN Sbjct: 437 FMQALEQRHLAHQGSPFQRVTVSAGVASLVPDAGDSSAQALALIRAADQALYRAKSNGRN 496 Query: 557 RVFASDN 563 R+ +++ Sbjct: 497 RLECAES 503 >UniRef50_A3Y6S3 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y6S3_9GAMM Length = 299 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 78/301 (25%), Positives = 131/301 (43%), Gaps = 8/301 (2%) Query: 262 TMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGG 321 + + A D + + L D + N + E+ + + G Sbjct: 7 EFKDIVEAAKDVVIVTKADLIDEPGPEIIYVNQAFTELTGYSKEEV--IGKTPRILQSKG 64 Query: 322 IRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIR 381 +++ + + L+ V V + + L++ + I+ Sbjct: 65 TSEETKKLIRKGLEDKVPVRVTIKN----YSKTGKEYWLDLSITPLFNDQGEVTHIVSIQ 120 Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 R V+ Q+ L+ + D LT L NR E A Q +S++ +D+D+FK Sbjct: 121 RDVTEYIYTQNKLEELSRTDPLTGLINRRVFDEMAEKEFYRYQNQNIHYSLLALDIDYFK 180 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 IND++GH GD VL+ + L ++R+QD R+GGEEFC+ILP A EVAE++R Sbjct: 181 RINDKYGHLTGDYVLASFSTLCEKNIRSQDKIARIGGEEFCIILPATDKVGAIEVAEKLR 240 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 ++ I ++ S+GVS + DYD+ + AD LY AK GRN+V++ Sbjct: 241 RAISNARFK-QDEHEIAVTVSIGVSQVK-MSDYDYVAMLKRADENLYRAKHQGRNQVYSQ 298 Query: 562 D 562 D Sbjct: 299 D 299 >UniRef50_A4XS06 Diguanylate cyclase n=7 Tax=Pseudomonas RepID=A4XS06_PSEMY Length = 508 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 91/399 (22%), Positives = 152/399 (38%), Gaps = 30/399 (7%) Query: 176 YVSRAGFYVSTQPTLFTRNVPTRYYGY----VTQPWFIGHSQRENRHRAVRWFTSQPEHA 231 Y + F++S + + + +F + P+ A Sbjct: 124 YGTFTSFFISERTRTYYQAKGVLKQVREDEPRDAWYFRVRQM-----SEPYEISVDPDMA 178 Query: 232 SNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLT 290 + ++ V D + GV G+ + V + + + + + D D + Sbjct: 179 NADRLTFFINFKVFDYEERFIGVAGVGLTVDAVVKLVDD-YQRRYDRSIFFTDRSGLLVL 237 Query: 291 SSNPDHPTGN-----IFDPRELALLAQAMEHDTRGGI----RMDSRYVSWERLDHFDGVL 341 + P G+ + L L + G +++ + D L Sbjct: 238 TGADGGPMGSRRGQALNTIDGLENLLFELPRPESGNFSYQEHGRGHFLNVRYIPELDWYL 297 Query: 342 VRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHD 401 + G S+ + L + + +LL+ + RR Q + A D Sbjct: 298 FVDKHEEGALAGIRKSLYLNLLICTLITLAVLLLVYLATRRY-------QRRIAALATTD 350 Query: 402 TLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAG 461 +LT L NR A + Q P + +DLD+FKA+ND GH AGD VL A Sbjct: 351 SLTELPNRRGFDILAAQALQEAQRDSSPLCAVLLDLDNFKALNDAHGHLAGDDVLRRFAR 410 Query: 462 LISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISA 521 + SLR D+ R GGEEF ++L A E+AE++R + E+ +A ++++ Sbjct: 411 QLRGSLRQADILCRWGGEEFILLLKNTDRNAAHELAEKLRQQCAEQRYPVA-GKALQVTV 469 Query: 522 SLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 SLG+S +E L DR LY AKQAGR+RV Sbjct: 470 SLGLSQWQEG--ETLHDLLGRTDRALYRAKQAGRDRVCV 506 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 83/284 (29%), Positives = 128/284 (45%), Gaps = 12/284 (4%) Query: 281 LYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGV 340 L D + ++N + ++ L+ +E G+ + + E++ + Sbjct: 21 LEDQDYSVIEATNGPQALDLLQSHDDIDLVLLDVEMPKMSGLEVLRKIKQDEQIKDLPVI 80 Query: 341 LVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSS--LQWQA 398 LV + GD ++ L L + ++ R+ S + + ++ A Sbjct: 81 LVTAN-------GDDQNVVDGLDLGAVDYVIKPYSLSVLLARVRSALREKERLDLMEKWA 133 Query: 399 WHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSH 458 D LT LYNR FE+A+ + Q ++ S I +D+DHFK +ND +GH GD VL Sbjct: 134 TTDPLTGLYNRRFFFEQAQRELERVQRNETDASFIILDIDHFKKVNDEYGHLVGDDVLEG 193 Query: 459 AAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIR 518 A L + R D+ R GGEEF + LP A VAER R K+ E K + Sbjct: 194 LAKLFKETFRKVDLCCRFGGEEFVICLPDTDTEGALLVAERTRKKVEELSFNTEKG-PLH 252 Query: 519 ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 ++ SLGVSS+ E + E + AD LY AKQ GRNR + D Sbjct: 253 VTISLGVSSANE--NTTLEDMLKRADDALYQAKQNGRNRTESLD 294 >UniRef50_Q7NQA3 Probable GGDEF family protein n=1 Tax=Chromobacterium violaceum RepID=Q7NQA3_CHRVO Length = 490 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 93/450 (20%), Positives = 166/450 (36%), Gaps = 40/450 (8%) Query: 134 VSEGNLLSRENESLDNEITAALEVGYLLRLAHN------SSSMVEQAM------YVSRAG 181 ++ + S ++S+ ++ A + L V + + Y Sbjct: 48 LTGDTIFSEIDKSILRPLSVAALMANDTFLQDWLKDGERDPERVARYLAAINGRYGITGS 107 Query: 182 FYVSTQPTLFTRN----VPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQ 237 F VS + +F + T + + + Sbjct: 108 FLVSENSRRYYYAGGVLKTVSPADREDVWYFHSRQI-----KEAYDITLDEDMTNGGKTT 162 Query: 238 VTVSVP-VDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDH 296 + ++ +D GV+G+ +P + L A ++ D R + S+ Sbjct: 163 LFINHRMLDGKGKLLGVIGVGLPQLELSAQL-AAHEQRFQRRIYFIDRSGRIVLDSSGTT 221 Query: 297 PTGNIFDP----RELALLAQAMEHDTRGGIRMDSRYVSWERL-DHFDGVLVRVHTLSEGV 351 P P A+LA E R +RY+ RL L+ + + Sbjct: 222 PRRLAEQPGLANLASAILAGGTEPKKLEYSRDGNRYLLTSRLLPELGWHLLVEQNETLAL 281 Query: 352 RGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGA 411 + ++ + L + + +L+ ++ Q ++ A D LT NR A Sbjct: 282 QPLHAALQVNLAINTTILLLVLIAVLATLQHY-------QRRMRQLATTDPLTGCLNRLA 334 Query: 412 LFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQD 471 + + C+ ++ +D+DHFK +ND+ GHQ GD+VL A L+ S LR D Sbjct: 335 FLDLLPGWLRACERTGAEPQLLMIDIDHFKQVNDKHGHQIGDQVLREIADLLRSQLRGSD 394 Query: 472 VAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEET 531 + R GGEEF V++ +A +AER+R + ++ A + ++ SLG+ Sbjct: 395 LLIRWGGEEFVVLVGSHGEDDA--LAERLRTAVARH-VMSASGKRLTVTVSLGLCQWLP- 450 Query: 532 GDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 E + AD LY AKQ GRNRV + Sbjct: 451 -PETLEAAVARADLALYAAKQGGRNRVCHA 479 >UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QT79_PERMH Length = 509 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 97/498 (19%), Positives = 178/498 (35%), Gaps = 38/498 (7%) Query: 79 IFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGN 138 +FL N E + L + + ++ +V+ + Sbjct: 23 VFLSNKREE-----NERVYLHQKIEKASAEFKATLNGYDMVIYFVYKRYMYDPEIVNALS 77 Query: 139 LLSRENESLDNEITAALEVGYLLRLAHNSSSMVE-QAMYVSRAGFYVSTQPTLFTRNVPT 197 R+ ++LD + L + + + F +P F Sbjct: 78 KAYRDRKNLDKLRKRVYTLLRPLYSDLKRYQIKFFKFYFPDGTTFIRFHRPDKFGDKPEK 137 Query: 198 RYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEH-ASNTEPQVTV---SVPVDSNNYWYG- 252 + +G + ++ + + T+ +V V+ + G Sbjct: 138 ERFSIFD----LGKGGNDRDTIGFKYTFPVTDGNIFIGNVEFTLPFSAVRVEMRKIFRGE 193 Query: 253 ----VLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELA 308 ++ I + + +N I +D ++ + + N + + + Sbjct: 194 YNFLIIKDLIYSKKFSEEKQNYIQSEIDPDFYYEEDPEFKVIRWNIPEEIISEINLQIRN 253 Query: 309 LLAQAMEHDTRGGIRMD--SRYVSWERLDHFDG----VLVRVHTLSEGVRGDFGSISIAL 362 L +E I +D Y + + + V+ + G F + I Sbjct: 254 KLKGNLEDFKPKSIAVDINGDYYIASFIPISNKKEKYIGYLVYYEKDNTYGVFKNTFIIS 313 Query: 363 TLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKL 422 + L +LL +++ V++ + A DTLT +YN+G + Sbjct: 314 YVGINLLVGLLLTMSFILG-------VIKERFKAMAEIDTLTGIYNKGKFNHLLQVELDR 366 Query: 423 CQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFC 482 + + P S+I D+DHFK IND FGHQAGD VL A ++SS++R+ D R GGEEF Sbjct: 367 SKRYGRPLSLIIFDIDHFKKINDAFGHQAGDYVLKTLAKIVSSNIRSTDFFARWGGEEFV 426 Query: 483 VILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSL 542 ++ P L A +AE+IR + E ++++S GV+ + + Sbjct: 427 ILAPETDLEGAQILAEKIRKAIEEYPFETVG----KVTSSFGVTE--AFENDTVDSFVKR 480 Query: 543 ADRRLYLAKQAGRNRVFA 560 AD LY AK GRNRV Sbjct: 481 ADVALYKAKDKGRNRVEI 498 >UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TWT4_MARAV Length = 407 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 21/291 (7%) Query: 274 NLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPREL---ALLAQAMEHDTRGGIRMDSRYVS 330 + + + LT P+ N A + + +R D + Sbjct: 124 DENWTMLFVSAGCADLTGYQPEELIRNRTTSYAALMDEEDAGQVAQEVEAAVRKDESFSV 183 Query: 331 WERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVL 390 + DG + V GV D G++ + +L +S+ L Sbjct: 184 EYAITRKDGRKIWVWERGCGVLDDDGTMVLEGIIL-----------------DISDRKQL 226 Query: 391 QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ 450 ++ L+ A D+LT + NR + + + P +++ +D DHFK IND +GH Sbjct: 227 ENELEALATRDSLTGVLNRRECSRVLIEELERARRYNRPLALLWIDFDHFKEINDTWGHA 286 Query: 451 AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEML 510 AGD VL + L+ S+R+ D GR GGEEF +ILP + EA E AER+R ++ + + Sbjct: 287 AGDSVLCSISSLLEDSVRSVDTLGRFGGEEFVLILPEMDVAEAEETAERLRQRVCNQPVA 346 Query: 511 IAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + IR++ S+GV+ + GD + L + AD+ +Y AK+ GRN + + Sbjct: 347 LESGHNIRLTISIGVAVFPDHGD-TLDALCAAADKAMYRAKKQGRNCIAMA 396 >UniRef50_C9Y2B0 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y2B0_CROTZ Length = 495 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 100/478 (20%), Positives = 167/478 (34%), Gaps = 36/478 (7%) Query: 106 EQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAH 165 E R I L R+ V ++ L+ R + G L + Sbjct: 18 ETERQARNQSISLARQAEDTFLQV---QLTLDELVRRSEDIFLQPADWNGSRGLLAQQQR 74 Query: 166 NSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFT 225 + +Y + + ++ + + + +F H+Q + + Sbjct: 75 QLPQLHGLFVYDANGDWIATSASVIPAQG------NSADRDYFRWHTQHSD--TGIHIGH 126 Query: 226 SQPEHASNTEPQVTVSVPVDS-NNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGE-YQLYD 283 S E V VSV +++ ++GVL ++ + +QF D D Sbjct: 127 VIRSR-STGELVVPVSVRLNNREGRFHGVLLATVKLDYFRQFYGYYEMGPSDTLGITFAD 185 Query: 284 SKLRFLTSSNPDHPTGNIFDPRELAL---LAQAMEHDTRGGIRMDSRYVSWERLDHFDGV 340 S + ++ + + +A + I R + L + Sbjct: 186 STVLYVRPFPDSYINRTLSSSPLFTRMLKIAPTGGGAWKSAIDGVPRIFGYATL-ERYPL 244 Query: 341 LVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSL------ 394 +V + +R + +I L A+ ++LI ++ R + Q L Sbjct: 245 VVSAGYDVDELRAAWWRNNIPTLALNAVLFGVVLIFGVLVLRQIRASLRYQRELIGLRDD 304 Query: 395 --------QWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDR 446 Q A D LT L NR Q P S++ D+D+FK ND Sbjct: 305 LTRSNHILQDLALLDGLTGLANRRQFDIYLEQCITRAQATGAPVSLVMFDIDYFKIYNDT 364 Query: 447 FGHQAGDRVLSHAAGLISSS-LRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLN 505 GH AGD L ++ L D R GGEEF +ILPGA A VA R ++ Sbjct: 365 QGHVAGDACLKAVGDILRHLPLHNTDRVARYGGEEFAIILPGADAHAAQRVALRALEAIH 424 Query: 506 EKEMLIAKSTTIR--ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + + ++ S G ++ GD + E L+S AD LY AK+AGRN V + Sbjct: 425 HARLSHPATPREEKVLTISAGAATV-TGGDVNGETLKSRADDALYQAKRAGRNCVVGA 481 >UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfuromonadales RepID=A1AK55_PELPD Length = 301 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 63/184 (34%), Positives = 94/184 (51%), Gaps = 3/184 (1%) Query: 374 LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 + S ++I + V+ + + L D LT +YNR L + + + PFS++ Sbjct: 117 ITSLFLIVQDVTELATYEQKLIEMNTVDALTGVYNRRFLESRLKEECDRYGRYSRPFSLM 176 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEA 493 +D+D FK +ND GHQ GD VL + A ++ +R D R GGEEFC +LP A Sbjct: 177 MIDIDFFKKVNDTHGHQGGDLVLKNVAAGAAAMIRKSDFLARYGGEEFCCLLPETDCDAA 236 Query: 494 AEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 VAE +R + E + + IR++ SLG++ D E L AD LY AK++ Sbjct: 237 ETVAEHLRAHIENME-HLFQKKVIRVTISLGIACFAP--DDSPETLVKRADEALYQAKRS 293 Query: 554 GRNR 557 GRNR Sbjct: 294 GRNR 297 >UniRef50_C0QLY1 Two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLY1_DESAH Length = 440 Score = 268 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 1/200 (0%) Query: 360 IALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPL 419 ++ +L + + I ++ ++ L+ A D LT NR + Sbjct: 240 FFISFSRSLDISGKFSNAIAIIEDITKRKTMEKELEKLATTDPLTGAKNRRSFLNLFEKE 299 Query: 420 AKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGE 479 K + + + +++ +D+DHFK IND FGH+ GD++L+ S LR D+ R GGE Sbjct: 300 MKRSKRYNYTLALVMIDIDHFKKINDNFGHETGDKILNLLVAKCHSVLRDSDIFARWGGE 359 Query: 480 EFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQL 539 EF ++LP L +A+ AER+R L + E+ T I + S+G + + +++ Sbjct: 360 EFIILLPETDLLQASSAAERLRGALAQSELRTNDGTNINFTVSIGFTIF-GNKNILIDEI 418 Query: 540 QSLADRRLYLAKQAGRNRVF 559 AD+ LYLAK+ GRNR Sbjct: 419 IKKADKALYLAKKQGRNRAV 438 >UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLJ7_DESAH Length = 576 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 86/415 (20%), Positives = 149/415 (35%), Gaps = 28/415 (6%) Query: 147 LDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGY-VTQ 205 L+ E G+ + V++A+ S +Q L + Y ++ Sbjct: 176 LEGEAADMTLDGFFNSINDQDRKRVKEAVECSIQSIKPLSQHCLIHCPDESHKYILNKSE 235 Query: 206 PWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQ 265 P F H N + + +T+S V+ + Sbjct: 236 PLFDEH---NNPALMLGVVQDITQLKEAEYRLITLSQAVEQSGSTI-------------- 278 Query: 266 FLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMD 325 + +L+G + + +T P+ G + + + I Sbjct: 279 -----LITDLNGVIEFVNPAFTHVTGYTPEEAVGKSTSILKSGMHPPEFYKNLWDTIISG 333 Query: 326 SRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVS 385 + DG L V G G+I+ + T + +++ Sbjct: 334 DTWKGQIINRKKDGELYWESATISPVMGKDGNITHYSAV--KEDITSRKKAEKLLKETQK 391 Query: 386 NMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAIND 445 + LQ D LT + NR E + C+ + S++ D+D+FK ND Sbjct: 392 RLETANQKLQTLVTSDGLTMIANRRKFDEYLDQEWQRCKRAKVWLSLLMCDIDYFKHYND 451 Query: 446 RFGHQAGDRVLSHAAGLISSS-LRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKL 504 +GHQAGD L A + + +R D+ R GGEEF VIL L A VA RI+ + Sbjct: 452 TYGHQAGDDCLRKIAQAMEKTVVRPMDLVARYGGEEFAVILSDTGLNGACHVARRIQEDV 511 Query: 505 NEKEMLIAKST-TIRISASLGVSSS-EETGDYDFEQLQSLADRRLYLAKQAGRNR 557 + ++S+ + ++ S+G++ + D + L AD LY AK+ GRNR Sbjct: 512 KNLNIAHSESSVSTHVTLSIGITCLIPDDEDLSMDLLIKTADEALYKAKRKGRNR 566 >UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBK1_DESAH Length = 430 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 80/362 (22%), Positives = 150/362 (41%), Gaps = 34/362 (9%) Query: 217 RHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYW---YGVLGMSIPVRTM-QQFLRNAID 272 + ++ + + + ++ V + + + +S+ + + +Q L+ D Sbjct: 83 PLKGLQASLAHMTWQARQVAEGDLNQQVHFLGEFSYSFNCMILSLREKEIIKQRLKQITD 142 Query: 273 KNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWE 332 +G L DS + + +NP+ + + + H+ + D + Sbjct: 143 VLGEGVL-LVDSDGKII-FANPEAMRLLGYS---FDEIEGCLIHEVIHKQQPDGTLYNSG 197 Query: 333 RLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLI-------SWYVIRRMVS 385 F+ ++ D G + LL + + + R ++ Sbjct: 198 ENPFFNAIV-----SGNDYNNDDGVFTCKSGLLMPISFACRAVFKNETRDGAVIAFRDIT 252 Query: 386 NMYV-------LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLD 438 + L+ QA D LT ++NR + K + ++ S+I D+D Sbjct: 253 VQKKNLQSLEGINELLEKQASTDALTGIFNRMKFNQTLTSEIKRAKRYRVALSLILFDID 312 Query: 439 HFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 HFK +ND +GH +GD VL H A L++S+LR D+ R GGEEF + P SL A ++AE Sbjct: 313 HFKQVNDSYGHLSGDTVLKHLARLVASNLREIDIFARWGGEEFVIQAPETSLESAIKLAE 372 Query: 499 RIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 ++R K+ K +I+ S GV++ + + L + AD LY AK+ GRN+V Sbjct: 373 KLRSKIENYVFPAPK----KITVSFGVATFRSSDNDI--TLVNRADEALYRAKEGGRNQV 426 Query: 559 FA 560 + Sbjct: 427 VS 428 >UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX81_9GAMM Length = 384 Score = 267 bits (682), Expect = 9e-70, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 3/199 (1%) Query: 362 LTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAK 421 L LL L T + + + + +S ++ + D LT++ NR L E+ Sbjct: 186 LILLLGLSTPYIGLLVAMNSSAIRRWRQRESEVRQLSTTDPLTQVANRRHLLERLNLEIS 245 Query: 422 LCQTHQHP-FSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 C+ H S++ +DLDHFK+IND GH GD L A ++ R D+ GR GGEE Sbjct: 246 RCERSGHSELSLLMMDLDHFKSINDEHGHLFGDEALRVTARVLREQSRNTDLVGRYGGEE 305 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 540 FC++LP A ++AER R L + ++ + I+ S+G+++ + E L Sbjct: 306 FCLLLPDTGPQGALQIAERCRQALEQADIDREDGEVLHITTSIGLATYQMG--DTNESLL 363 Query: 541 SLADRRLYLAKQAGRNRVF 559 AD LY AK+ GRNR+ Sbjct: 364 HRADEALYQAKEQGRNRIV 382 >UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM57_9PROT Length = 461 Score = 267 bits (682), Expect = 9e-70, Method: Composition-based stats. Identities = 88/293 (30%), Positives = 132/293 (45%), Gaps = 17/293 (5%) Query: 270 AIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYV 329 +G YQ+ + + L + D G + ++EH R D Sbjct: 184 FFRSRENGRYQMVNQRYAELHGRSRDDVVGRTPAEFLAPAILASIEHWDRALYDGDEPRQ 243 Query: 330 SWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYV 389 ++E F GV R L + D + I +T + V+ + Sbjct: 244 AYEDDMSFAGVGARRMVLHKAKMWDASNRLIGVTGVMV---------------DVTESHR 288 Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L+ L+ A D LT L NR A +AR + H P SV+ +D+DHFK++NDR+GH Sbjct: 289 LRQELERLATTDPLTGLSNRRAFLMRAREEVERAVRHDRPMSVVMIDVDHFKSVNDRYGH 348 Query: 450 QAGDRVLSHAAGLISSSLRAQ-DVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 GD VL A + +LR DVA R GGEEF ++LP +++ A ++AERIR+ Sbjct: 349 DIGDLVLQDVAATVQGALRNSGDVAARFGGEEFVLLLPETTVSGAQQLAERIRVAFERTA 408 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + + +R +AS GV D + + AD LY AK+AGRNRV + Sbjct: 409 VETEQGA-VRFTASFGVDVFRSDMDTGIDTVLKRADDALYRAKEAGRNRVQLA 460 >UniRef50_C4XKN6 Putative signaling protein n=2 Tax=Desulfovibrio magneticus RS-1 RepID=C4XKN6_DESMR Length = 629 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 1/194 (0%) Query: 370 TTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHP 429 T + + R ++ +++ L+ A D+LT L NR E + L ++ + H+ Sbjct: 425 ETGISTGIFAAARDITERKIMEERLKEMATTDSLTGLNNRQHFLEHSSILFEMAKRHKAN 484 Query: 430 FSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGAS 489 S+ D+DHFK +ND +GH+AGD VL + L + R+ D+ GR+GGEEF VI+P Sbjct: 485 LSIALFDIDHFKQVNDTWGHEAGDLVLRELSKLALNCFRSSDIIGRIGGEEFAVIMPETD 544 Query: 490 LTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYL 549 EA +ER R + ++ + I+ S+G++ + L ++D LY Sbjct: 545 KEEAILASERFRKIVESTRFEY-ENDLLSITVSIGIAQFNPNTNTTINDLTKISDDALYT 603 Query: 550 AKQAGRNRVFASDN 563 AK GRN VF +++ Sbjct: 604 AKANGRNMVFCAND 617 >UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1M6_9DELT Length = 396 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 83/322 (25%), Positives = 135/322 (41%), Gaps = 21/322 (6%) Query: 239 TVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPT 298 ++ +D W + I + +R A +N+ + L K+R Sbjct: 90 AMARLIDLEGRW----PLGIFLVEPDGTMRLAAHRNVPDHFILAHQKMRVGDCLCGRAAR 145 Query: 299 GNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSI 358 G + A+A H G + L+ ++ V F + Sbjct: 146 GELIITPRCQ--AKASRHIAPGPMPEHGHL------------LLPLYAKERVVGVFFYYL 191 Query: 359 SIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARP 418 LTL A T +S+ + + + L +++ + +D LT L+N G + Sbjct: 192 PPDLTLTKAELETFQTVSYQL--GLAIDNARLYETVRRLSIYDPLTGLFNHGQFYNLLAE 249 Query: 419 LAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGG 478 Q P S++ +D+DHFK +ND +GH+AGD VL +GL+ RA D R GG Sbjct: 250 ELSRHQRTGRPLSLLMLDIDHFKKVNDTYGHRAGDAVLQQLSGLLKKQARAIDRVCRYGG 309 Query: 479 EEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQ 538 EE +ILP A + AER+R + + I ++ S+G ++ + E Sbjct: 310 EELALILPETDREAARQTAERLRRHVEKCCFATCGQQEIGVTVSIGAATCPDAA-ISAET 368 Query: 539 LQSLADRRLYLAKQAGRNRVFA 560 L + ADR LY AK+AGRNRV + Sbjct: 369 LVNAADRALYAAKRAGRNRVCS 390 >UniRef50_Q2L341 Putative signaling protein n=3 Tax=Bordetella RepID=Q2L341_BORA1 Length = 521 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 107/502 (21%), Positives = 167/502 (33%), Gaps = 78/502 (15%) Query: 115 KIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGY--LLRLAHNSSSMVE 172 +E NR + +D + E + L A+ E+ L RL H SS Sbjct: 42 SLEDNRAFAQKLARSADIFLRESLGELSYSARLIGADDASPEIVRRELERLKHQSSRFNA 101 Query: 173 QAMYVSRAGFYVSTQP---TLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPE 229 A Y++ G V P L R + T R S P Sbjct: 102 TA-YINAEGVLVDVLPGGEALPGRVISTTQMEQALA----SRLPR----------VSDPF 146 Query: 230 HASNTEPQVTVSVPVDSNNYWYGVLGMSI----PVRTMQQFLRNAIDKNLDGEYQLYDSK 285 A+ + +S PV + +G M + + + L +N + D + Sbjct: 147 LAATGRWVLALSQPVFKADGRFGGFVMGVLHLHERNALAELLGEQTHQN-GSYQYVVDRR 205 Query: 286 LRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRG-GIRMDSRYVSWERLDHFDGVLVRV 344 L + + + + E R + + +V Sbjct: 206 GVLLFHPDTPRVGRLVDQNPVVLAIMNGEEGTRRLFNNDGVDMLSGYALVHETGWGVVAQ 265 Query: 345 HTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNM----------------- 387 + + G + + + LL W++ R+ + Sbjct: 266 RPVDSVLAGTRKLLLLTIQTSLPWLCLSLLCVWWLANRIARPLSQLAAAAADLDKPRIAE 325 Query: 388 ---------YVLQS-----------------SLQWQAWHDTLTRLYNRGALFEKARPLAK 421 + L+ + D LT L NR L E + Sbjct: 326 RLASVGTWYREAEQLKTALATVSRKIGTKFNQLRQDSLTDALTGLLNRRGLDEILQSE-- 383 Query: 422 LCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEF 481 + SV+ VD+DHFKAIND GH AGD V+ A L+ S RA D+ GR+GGEEF Sbjct: 384 --PRYGRAMSVLAVDIDHFKAINDELGHAAGDAVIRGIAALLRSRARASDILGRLGGEEF 441 Query: 482 CVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQS 541 V+LP +A + AERIR + + + + S+GV+ G + Sbjct: 442 VVLLPNTDRAQALQAAERIRAAVETFQAVPGG----ACTVSIGVAVYPHEG-ASLTAVLE 496 Query: 542 LADRRLYLAKQAGRNRVFASDN 563 AD LY AK+ GRNRV + Sbjct: 497 RADEALYEAKRGGRNRVCDAAE 518 >UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZ84_DESRD Length = 550 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 78/391 (19%), Positives = 138/391 (35%), Gaps = 28/391 (7%) Query: 175 MYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNT 234 MY F R + F + + + VRW ++ + Sbjct: 169 MYSDSRAFMRMIDERDLARVQRAFQAVRNERIDFNEEYRIVHPEKGVRWIHARTYRFESD 228 Query: 235 EPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNP 294 ++ V I R +Q+ ++++ Y+ + N Sbjct: 229 HKKLFVG------------TAEDITERKVQEEHVLKSKQHVEALYRGIPLPIFTWERRND 276 Query: 295 DHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVH---TLSEGV 351 D + A+E + R++S D V+ +H + Sbjct: 277 DFMLSSFNTA--------AVEMTQGKAKHLKGRWLSEVYRDQNPQVIEDIHRCFESRSNL 328 Query: 352 RGDFGSISIALTLLWALFTTMLLI---SWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYN 408 R ++ + + + + + +++ Q L+ + D LT L+N Sbjct: 329 RRQMSYTLVSTGEEKYIEASYVYVPDRHVMAMVNDITHQQQYQEHLKRLSRTDELTGLFN 388 Query: 409 RGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLR 468 R + ++ +D+DHFK +ND++GH GD VL H ++ +R Sbjct: 389 RRHFITLMHKEFSRARRTHERLTLAMLDIDHFKDVNDKYGHDVGDHVLQHLGRILREDVR 448 Query: 469 AQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSS 528 D+A R GGEEF + P L++A + ER+R E+ TI + S G+S Sbjct: 449 PYDIAARYGGEEFAICFPDTDLSQADHICERLRTLCAASEV-SRNGGTIGFTVSFGLSEL 507 Query: 529 EETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 D + L AD LY AK GRNR+ Sbjct: 508 RP-EHEDLDGLLKSADNALYAAKANGRNRIE 537 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 87/311 (27%), Positives = 123/311 (39%), Gaps = 24/311 (7%) Query: 273 KNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRY-VSW 331 +N D R T +P + + P E + R Sbjct: 328 ENSHDVIWTLDIPSRTYTYVSPAIKEMSGYLPEETVGQPLDVRLTPDSAARAARDIDQRL 387 Query: 332 ERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMY--- 388 R+ D V + E VR D I+ + + L + + I R VS Sbjct: 388 RRIAAGDKAASVVVSELEQVRKDGEVITTEVVSSYLLDADGVAQTILGITRNVSERKAVE 447 Query: 389 ------------------VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPF 430 LQ +LQ A D+LT LYNR L E + P Sbjct: 448 SALRETNRQLHARIEEIGRLQVALQELAVRDSLTGLYNRRYLDETLEREVSRARREGIPL 507 Query: 431 SVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASL 490 S++ +D+DHFK +ND +GHQ GD VL A +S+ +RA+DVA R GGEEF ++LP L Sbjct: 508 SLVMLDIDHFKQVNDTYGHQVGDEVLRILASTLSADIRAEDVACRYGGEEFLILLPNMPL 567 Query: 491 TEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLA 550 A+ R + + I + SLGV++ E G + L AD+ LY A Sbjct: 568 ETTMLRAQGWRSAVEALSVKHGN-FQITFTISLGVAAYPEHG-KTPDDLTRCADQALYRA 625 Query: 551 KQAGRNRVFAS 561 K GRN+V Sbjct: 626 KNEGRNQVSVF 636 >UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47C76_DECAR Length = 548 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 84/335 (25%), Positives = 141/335 (42%), Gaps = 18/335 (5%) Query: 236 PQVTVSVPVDSNNYWYGVLGMSI--------PVRTMQQFLRNAIDKNLDGEYQLYDSKLR 287 Q+ V+ ++ ++ L + + + FL + I+ + Y Sbjct: 219 MQLGVTDVATPDDRFFVGLIRDLSSEKMLRKRLAESRNFLADVIEHSPSATYVKSREGRY 278 Query: 288 FLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTL 347 L + + TG +L + R V E + V Sbjct: 279 LLVNRKHEEVTGLSR----AQVLGKTDAEIFPAAAAEAYRRVDLEVMASGHTV-----EA 329 Query: 348 SEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLY 407 E + G ++ + I ++ + Q L+ + D LT L+ Sbjct: 330 EEKLHKGQGEAFFLSVKFPTRNSSNEITGICGISTDITPIKHYQKELERLSQFDELTNLF 389 Query: 408 NRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL 467 NR F A+ ++ SV+ +D+DHFK IND GH+ GD VL++ I SL Sbjct: 390 NRRHFFSLAKHELNRSSRYRSKLSVMMLDIDHFKRINDGHGHKTGDLVLANIGKQIGDSL 449 Query: 468 RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSS 527 R D+AGR+GGEEF ++LP L +A+ +AER+R ++ E + I T+ + S+G+++ Sbjct: 450 RDSDIAGRMGGEEFAILLPETDLEQASIMAERLRKQVAETWLDIGDGRTLNCTLSIGLAT 509 Query: 528 SEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + D E L AD LY AK +GRN+V +D Sbjct: 510 -KSDQQIDLENLLHQADTALYAAKNSGRNKVSCAD 543 >UniRef50_Q31M78 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=3 Tax=Synechococcus elongatus RepID=Q31M78_SYNE7 Length = 1037 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 88/408 (21%), Positives = 160/408 (39%), Gaps = 27/408 (6%) Query: 166 NSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWF- 224 SS+ A+Y Y L + + + + ++ ++ RW Sbjct: 642 RSSASEWSALYN----IYQPNGSDLMPTDALPLFRAFRHEIVQDVEMMIKDPSKSERWVV 697 Query: 225 -TSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYD 283 + P + V D + + Q+ LR A+D+ + + D Sbjct: 698 CSGGPFFDDQNQFLGAVIAMRDVTAERKTKQQLQEALVEAQR-LRAALDQ-VSSHIYMKD 755 Query: 284 SKLRFL--TSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVL 341 + R++ S D ++ + E + +DSR E+ Sbjct: 756 LQFRYIYANRSALDFVDRSLEEILGKDDFFFFSEEAAKLLQAIDSRVFQGEQTTE----- 810 Query: 342 VRVHTLSEGVRGDFGSISIALTLLWALFTTML---LISWYVIRRMVSNMYVLQSSLQWQA 398 V G + + L + ++ + +I I ++ L+ LQ QA Sbjct: 811 -----EIHLVNPKDGQLRVYLEIKTPIYESAQSSNIIGLLGISTDITEQKKLEQKLQQQA 865 Query: 399 WHDTLTRLYNRGALFEKARPLAKLCQTHQH--PFSVIQVDLDHFKAINDRFGHQAGDRVL 456 D LT + NR A+ Q S++ +D+DHFK IND +GH GD+VL Sbjct: 866 TTDALTGILNRRQFITLAQAELNRIYRIQRDTSLSLVIIDIDHFKTINDSYGHTVGDQVL 925 Query: 457 SHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTT 516 + ++R D+ R+GG+EF ++LP + +A +V +RIR + ++ + + + Sbjct: 926 ILWTNICQQNIREVDIFARLGGDEFVLMLPETNGKQAYQVMDRIRQLVIQQSLHLPQ-QA 984 Query: 517 IRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 I I+ S+G++ +Q ADR LY AKQ GR+R+ D + Sbjct: 985 IAITISVGIAVWTP-EILTLDQFLERADRALYQAKQQGRDRIILLDTS 1031 >UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BVV0_DESAD Length = 838 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 64/185 (34%), Positives = 92/185 (49%), Gaps = 1/185 (0%) Query: 376 SWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQV 435 + V+ ++ L+ A D +T+L NR E + + + P S++ Sbjct: 649 LLIGVNWDVTESREKENQLRRMATTDDMTKLNNRRYFIELVKSEIERSIRYSRPLSLVMF 708 Query: 436 DLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAE 495 D+D FKA+ND +GH GD VL A LR D+ GR+GGEEF V LP L A Sbjct: 709 DVDKFKAVNDTYGHDVGDMVLKAIAATAKGVLRDVDIIGRLGGEEFAVGLPETDLKGAML 768 Query: 496 VAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGR 555 +AER+R+ L E + + + + SLGV+ + D + L AD LY AK+ GR Sbjct: 769 LAERLRVVLEEASVELPDGGIVDFTVSLGVAVLD-RSITDVDVLLKHADLALYAAKENGR 827 Query: 556 NRVFA 560 NRV A Sbjct: 828 NRVEA 832 >UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V6Y8_SULSY Length = 492 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 81/342 (23%), Positives = 137/342 (40%), Gaps = 28/342 (8%) Query: 242 VPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNL-----DGEYQLYDSKLRFLTSSNPDH 296 P+ NN + +++P + L N +K+ L ++K + +PD+ Sbjct: 155 YPIFLNNKRVCDVYLNVPFYKISDDLANTFNKSYLFIIKKDFLNLKENKGYIQSDLSPDY 214 Query: 297 PTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRV----HTLSEGVR 352 + F + L + + R + + + ++ + Sbjct: 215 FVESKFYNQILKTKNNDSFSLSEINKKAKKEIDKKLREEVSFSYPIDINGNTILMTFMLI 274 Query: 353 GDFGSISIALTLL-------------WALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAW 399 F +ISI + + + + LL +I + N+ L++ + +A Sbjct: 275 KSFNNISIGYLISYEADTTFKVFSKSFYIMISSLLFIMIIINIFIINIIKLKNVAEKKAI 334 Query: 400 HDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHA 459 D LT L+NR + + + + + P S++ D+DHFK IND +GH GD L Sbjct: 335 TDKLTGLFNRSIIDTLIQVEIERAKRNNKPISILLFDIDHFKKINDTYGHDKGDYALKTI 394 Query: 460 AGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRI 519 A + +LR D R GGEEF ILP L A +VAE+IR + R+ Sbjct: 395 AEIARRTLRKSDYVLRWGGEEFLAILPETDLDGATKVAEKIRSNIENYNFK----DIGRV 450 Query: 520 SASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + S+GV+ + + AD LY AK GRNRV S Sbjct: 451 TVSIGVTMLKIG--EPLDNAIKRADEALYAAKNKGRNRVEVS 490 >UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTU2_DESBD Length = 339 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 109/265 (41%), Gaps = 7/265 (2%) Query: 298 TGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGS 357 I E +A+ + R + R + D + G Sbjct: 76 DQLISGYHECMARGEAVTFEQRPVLNGSQRLFETLLVPVKD-----EAGTITHIWGMARD 130 Query: 358 ISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKAR 417 ++ L AL + +++R + L + D LT + NR Sbjct: 131 LTRFLVSQNALVHLNEQLEAKILQR-TRELEEANHRLSELSLTDGLTGIANRRRFDAALA 189 Query: 418 PLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRV 476 ++I +D+DHFK ND +GHQ GD L A ++ SS R D+ R Sbjct: 190 EEWSRSARTGSTLALIMLDIDHFKKYNDHYGHQQGDDCLRRVAEVLRSSARRQGDLVSRY 249 Query: 477 GGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDF 536 GGEEFC+ILP +L A E+AER+R ++ +M S R++AS+GV++S Sbjct: 250 GGEEFCMILPDTALPGAFEIAERLRREVENMDMPHVLSDVGRVTASMGVAASMPCKAMSP 309 Query: 537 EQLQSLADRRLYLAKQAGRNRVFAS 561 +L AD LY AK GRN V + Sbjct: 310 AELLRRADESLYQAKSEGRNCVRGA 334 >UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=Cyanothece RepID=B7JZG8_CYAP8 Length = 668 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 101/567 (17%), Positives = 204/567 (35%), Gaps = 45/567 (7%) Query: 30 FIVVLLFSTLLTWREVVVLEDAYISSQRNHLENV------ANALDKHLQYNVD-KLIFLR 82 F + LF+ + + + + + + + + L+N A + + L ++ ++ Sbjct: 107 FTAIQLFTLIP--KALSLPSPSQLEALNHQLQNQIKEREAAEQIVRQLNEELEHRVQQRT 164 Query: 83 NGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSR 142 ++ A R V + +I L V + D N + Sbjct: 165 TELKTANQKLQKEILERQQVELALRESQRFTKRIADLTPNLLYVYDIVDQKNIYCNRFIK 224 Query: 143 ENESLDNEITAALEVGYLLRLAHNSSS--------------------MVEQAMYVSRAGF 182 + E + ++ L H + + Sbjct: 225 DLLGYTPEEIQQKNIDIIVSLIHPDDQQKLNRCRTRLFNLRDEDYLQIEGRLKDSEDNWH 284 Query: 183 YVSTQPTLFTRNV---PTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVT 239 ++ + T+F R + P + + ++ + ++ E T+ + Sbjct: 285 WIQIRKTIFERTIDGEPKQILSVASDITPSKEAEITLQQVNLQLAERVQELEIRTQELIC 344 Query: 240 VSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYD--SKLRFLTSSNPDHP 297 + + + L +S + + ++ + + D + Sbjct: 345 LG---EITDLLQACLSVSEAEKILADLVKPLFPNYSGAIFTIKDLSDTFELVAHWGNSLN 401 Query: 298 TGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGS 357 T + L + H Y ++ G + + ++ G G Sbjct: 402 TAKSLLASQCWGLRRGNTHGNNPDFPGL--YCQHIYVNEGIGRTLCIPMIAHG--ETLGL 457 Query: 358 ISIALTLLWALFTTMLLISWYVIRRMVSN--MYVLQSSLQWQAWHDTLTRLYNRGALFEK 415 + + L+ + + ++ V +++ L+ +L+ Q+ D LT L+NR L Sbjct: 458 LYLNLSNVELFNPSQQHLAEAVSKQIAIAFANLKLRETLEEQSLRDPLTGLFNRRYLEIS 517 Query: 416 ARPLAK-LCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAG 474 + Q + +I +D+DHFK ND FGH+AGD VL A + + +R D+A Sbjct: 518 INRELNTIIQDQDYSLGLIMLDIDHFKQFNDNFGHEAGDLVLQTVANCLQNHIRQSDIAC 577 Query: 475 RVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDY 534 R GGEEF +ILP ASL + E AE+IR + + ++ I+AS GV++ + G Sbjct: 578 RFGGEEFMIILPRASLNKTLERAEKIRESIKQLKIEYKSQPLDSITASFGVAAFPQNG-T 636 Query: 535 DFEQLQSLADRRLYLAKQAGRNRVFAS 561 +L AD+ LY AK+ GR+RV + Sbjct: 637 TLHELFIDADKALYQAKKQGRDRVVCA 663 >UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U7E6_MARAV Length = 405 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 105/207 (50%), Gaps = 3/207 (1%) Query: 353 GDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGAL 412 DF + L ++++S + M S+ LQ L A D LT LYNR A Sbjct: 183 EDFMNAGWLSALAIVAGEFLVILSSFCTIWMASD--ELQDELSEIARIDPLTGLYNRRAF 240 Query: 413 FEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDV 472 E Q PF++I DLDHFK +NDR+GH GD VL A + +R DV Sbjct: 241 DECCDIEFSRAQRSGAPFAIIMCDLDHFKRVNDRYGHHVGDEVLRRFANTLKEHIRKHDV 300 Query: 473 AGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETG 532 R GGEEF ++LPG + EVAE++R K + ++ I + +SAS GV+ + + Sbjct: 301 VARFGGEEFVLLLPGKDTEQGLEVAEKLRAKTADTQITIGDDVCLTLSASFGVAHYDSS- 359 Query: 533 DYDFEQLQSLADRRLYLAKQAGRNRVF 559 D ++ + AD LY AK+ GRNRV Sbjct: 360 DREWSAVLHRADNALYAAKKQGRNRVV 386 >UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor domain and GGDEF domain n=2 Tax=Idiomarina RepID=A3WKY5_9GAMM Length = 999 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 72/214 (33%), Positives = 115/214 (53%), Gaps = 10/214 (4%) Query: 355 FGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQ-------SSLQWQAWHDTLTRLY 407 + L++++AL ++ IR + + L+ L+ A D+LT+L Sbjct: 789 WQQSWFWLSIIFALGLAATILVRARIRFLNNQRAQLELMVAEKTKELKGLARQDSLTQLG 848 Query: 408 NRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL 467 NR A E+ + K C+ + P S+ +D+DHFK+INDRF H GD+VL + L+S+ L Sbjct: 849 NRRAFDEQLQYEFKRCERSEQPLSLAIIDVDHFKSINDRFLHVIGDQVLIELSALLSNML 908 Query: 468 RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSS 527 R D R GGEEF +++P + EA + AERIR ++ + + ++ S+GV+S Sbjct: 909 RDIDYIARWGGEEFALLMPETTAKEALQAAERIRQRIEDTSYQHLADE-LAVTVSIGVAS 967 Query: 528 SEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 SE ++ L AD+ LY AKQ+GRNR + Sbjct: 968 SEHYPNHS--ALLVAADKALYKAKQSGRNRTELA 999 >UniRef50_A0YVI7 Regulatory components of sensory transduction system n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YVI7_9CYAN Length = 477 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 82/288 (28%), Positives = 120/288 (41%), Gaps = 11/288 (3%) Query: 275 LDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERL 334 D + +T + G + Q R ++ D + R Sbjct: 180 SDNPIIYVNQAFEKITGYSVSEVWGKNCRFLQGEDRDQPNLDIIRNALKNDEDCLVIIRN 239 Query: 335 DHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSL 394 DG L VR G+I+ + + + RM + L Sbjct: 240 YRKDGTLFWNEVSISPVRDAGGNITHYIGIQSDITER---------HRMQIALEEANRKL 290 Query: 395 QWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDR 454 Q A D LT++ NR + E K C Q P ++I D+D+FKA ND +GH GD Sbjct: 291 QHLANIDGLTQIANRRSFDETLEQEWKRCFREQQPIALILCDVDYFKAYNDYYGHLQGDE 350 Query: 455 VLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 L A IS + R D+ R GGEEF VILP + A +VA+ I+ ++ + + K Sbjct: 351 CLIQVAQAISQVIKRPADLVARYGGEEFVVILPNTDGSGARQVAQLIQDQIRQLQSPHVK 410 Query: 514 STTIR-ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 S I+ SLG+SS +G EQL + AD LY AKQ GR+++ Sbjct: 411 SDVSSYITLSLGISSIIPSGMTSPEQLVNAADSALYQAKQQGRDQIVV 458 >UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC96_DESAH Length = 1268 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 112/238 (47%), Gaps = 7/238 (2%) Query: 323 RMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRR 382 R+ + V + DG+ + TL R ++ ++ L + LF+ +L + + Sbjct: 1036 RIMRKLVDSLTREEVDGIYQKWVTLRFEHRFNYKNMWRYLFITALLFSGILFWNR-KLSA 1094 Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 M + L+ + D LT LYNR + + + +P S+I +D+D FK Sbjct: 1095 FNRQMAEANAKLEQLSVTDRLTGLYNRMKIDDTLLEEIGRVLRYNYPLSLILMDIDLFKQ 1154 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 +ND GHQAGD VL A + ++R+ D+ GR GGEEF VI P L A +AE +R Sbjct: 1155 VNDTHGHQAGDAVLIQMAKTMDKNIRSTDICGRWGGEEFMVICPHTDLKGALSLAEHLRE 1214 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + + I + S GV+ L + ADR +YLAK+ GRNRV + Sbjct: 1215 SIARQIFPH----VITQTGSFGVAQY--GNGDSEADLIARADRAMYLAKEGGRNRVES 1266 >UniRef50_Q489Q4 Sensory box/GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q489Q4_COLP3 Length = 451 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 109/215 (50%), Gaps = 1/215 (0%) Query: 345 HTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLT 404 + E G+ G ++ L + V+ ++ L+ + A D LT Sbjct: 236 QVIEETTHGENGDNCHYISTKVPFDRPDKLPALIGFSTDVTELFKLKEEFKLLANTDPLT 295 Query: 405 RLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLIS 464 LYNR E+A + + + ++I +D+DHFK+IND+FGH AGD+VL A + Sbjct: 296 NLYNRRFFIEQAEKEYQRAKRYSLSMTLISIDIDHFKSINDQFGHPAGDQVLIEIAKQLK 355 Query: 465 SSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLG 524 +SLR D+ R+GGEEF ++LP S A AERI+ + + + I +S S+G Sbjct: 356 ASLRQTDILARIGGEEFSILLPETSAMSAMTFAERIKEEQSRLIITGDWQGEINLSVSIG 415 Query: 525 VSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 VSS + D F+ L S AD+ LY AK GRN V Sbjct: 416 VSSLIAS-DKAFDVLFSRADKALYQAKNTGRNTVC 449 >UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7F5_MAGSM Length = 320 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 81/311 (26%), Positives = 132/311 (42%), Gaps = 15/311 (4%) Query: 265 QFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRM 324 L + + + T + D + L +L + GGI+ Sbjct: 12 DQLHLFYGVGYESVAYVLEDC-WVYTMQHDDIIISPDYPNDALYVLLEGQARVHLGGIQT 70 Query: 325 DSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIAL--TLLWALFTTMLLISWYVIR- 381 + + + ++ S V + + +++ + +W+L + ++ ++ Sbjct: 71 EPLLILETGSCVGELSIIDQGRASAYVLAEGATKLLSIDESRVWSLIHSSHTLACNLLNI 130 Query: 382 ---------RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSV 432 R++ Q L+ A D LT +YNR E + + + Q+P S+ Sbjct: 131 LSKRMRNNNRVIIEGSERQRKLETFAKVDPLTGIYNRRWFDESMQRQMRRVEHSQNPLSL 190 Query: 433 IQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTE 492 I +D+DHFK ND GHQ GD L A IS LR D+A R GGEEF V+LP Sbjct: 191 IMLDVDHFKRYNDTHGHQGGDEALIALAHTISLHLRPGDIAARYGGEEFAVVLPDTDAVS 250 Query: 493 AAEVAERIRLKLNEKEMLIAKSTTIR-ISASLGVSSSEETGDYDFEQLQSLADRRLYLAK 551 +AER+R + E+ + ++ I+ SLGV+ + T D +L + AD LY AK Sbjct: 251 GRMIAERLRTAVEALEIKDDEGNSLSGITISLGVAQTSGTVD-SVSELIATADAALYQAK 309 Query: 552 QAGRNRVFASD 562 GRNRV D Sbjct: 310 NQGRNRVVVGD 320 >UniRef50_C6CKY4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dickeya zeae Ech1591 RepID=C6CKY4_DICZE Length = 463 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 82/318 (25%), Positives = 137/318 (43%), Gaps = 27/318 (8%) Query: 256 MSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPREL-------A 308 M + ++ L + D + L P T F P Sbjct: 159 MDLLLQRAPSVLYTFQVRGEDRRFVYCSPVSTRLLGLTPQMMTAVPFGPGHPLREIILPE 218 Query: 309 LLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWAL 368 L + ++H G S + S R+ +G + +HT + GSI ++L Sbjct: 219 DLERIVQHYHSGNFHHHS-WRSNFRICAENGDVRWIHTEASASHPGDGSIVFYGSML--- 274 Query: 369 FTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQH 428 V+ + ++ LQ A D+LT + NR E+ + L + ++ Q Sbjct: 275 --------------DVTELKQSETLLQVLAQTDSLTGIANRRHFDERYQHLWRQQESMQK 320 Query: 429 PFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQD-VAGRVGGEEFCVILPG 487 P S++ +D+D FK ND +GH GD + +++ L + + + GR GGEEF ++LP Sbjct: 321 PLSLLMIDIDRFKRFNDSYGHSKGDACIKSVVETLAAQLPSSECLLGRYGGEEFIMVLPE 380 Query: 488 ASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETG-DYDFEQLQSLADRR 546 +A +AER R + E+ KS ++ S+GV++++ QL + AD+ Sbjct: 381 TDHRQALILAERCRQAVESMEIPHTKSPQGVVTVSIGVAAAKPGETGSSMTQLSNDADQA 440 Query: 547 LYLAKQAGRNRVFASDNA 564 LY AK GRNRV AS +A Sbjct: 441 LYRAKHQGRNRVEASLSA 458 >UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VYV6_MAGSA Length = 578 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 78/346 (22%), Positives = 124/346 (35%), Gaps = 18/346 (5%) Query: 215 ENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKN 274 + +R + E QV V + ++ K+ Sbjct: 250 RDITGQIRAVAALRHMNDTLEQQVAARTRELDEERARAVEARAFVESLLEAVPNPLWWKD 309 Query: 275 LDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERL 334 G Y Y+ R L P G A + R L Sbjct: 310 TRGRYLGYNGAFRELHGVGPTDWIGRTTAEMVNPGFAAIASQADTQALAEAGRVQFEAHL 369 Query: 335 DHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSL 394 + + V G + ++ ++ +++ L Sbjct: 370 EVAADRALDVVVNKTVWHGRDNRPEGVIGVML----------------DITERKRMEAEL 413 Query: 395 QWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDR 454 + A D LT ++NR E AR + H P + +D+DHFK IND GH GD Sbjct: 414 RRLATTDVLTGIFNRRHFMEMARIEVDRARRHGRPLVALMLDIDHFKRINDTHGHPVGDV 473 Query: 455 VLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKS 514 + A + + +R +DV GR+GGEEF ++L L A VAER+R + + Sbjct: 474 AIKALADVCTQIIRHEDVLGRMGGEEFAIVLTETDLDGALLVAERLRQAVAAIRIPAELG 533 Query: 515 TTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 T+ + S+GV+ GD + + S AD LY AK++GRN+V Sbjct: 534 -TVAFTTSIGVAE-RLEGDATIDTILSRADMALYSAKRSGRNKVAV 577 >UniRef50_B9JR22 Two component response regulator n=1 Tax=Agrobacterium vitis S4 RepID=B9JR22_AGRVS Length = 649 Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 74/312 (23%), Positives = 127/312 (40%), Gaps = 7/312 (2%) Query: 256 MSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLT-----SSNPDHPTGNIFDPRELALL 310 + + +Q L +A+ DG ++D + + + S +L + Sbjct: 315 LEQQLAESRQQLADALANMADG-LVMFDRQGKLVYCNERYRSMFSKTADIRVPGADLHDI 373 Query: 311 AQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFT 370 A DS + E++ VL V E D S+ + + Sbjct: 374 IAASRARGEEMTPRDSDPILPEQVFDSLPVLPLVPGKREITLWDGRSLEAQTRSVGGGGS 433 Query: 371 TMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPF 430 ++ ++ + +L+ A+ D LT LYNR A + R Sbjct: 434 LIVFTDITRAKQAEGLLRHTNRALEKAAFTDGLTGLYNRRAFDVQLRQEFARSHRTGSGV 493 Query: 431 SVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGAS 489 S++ +D+DHFK NDR+GHQAGD+ L A + S R+ D+A R GGEE +IL Sbjct: 494 SLLMIDIDHFKLFNDRYGHQAGDQCLRQIAATLRSVAKRSTDIAARYGGEEMALILSDTD 553 Query: 490 LTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYL 549 L + VAE + + + S ++ S+GV+++ + L + AD LY Sbjct: 554 LAGGSTVAEYYCQAVRDLHIPHGDSEKGIVTVSIGVAAAPSDDIQSSDDLVASADAALYQ 613 Query: 550 AKQAGRNRVFAS 561 AK +GR++ + Sbjct: 614 AKHSGRDQYVTA 625 >UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Cyanobacteria RepID=B4B904_9CHRO Length = 1297 Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 3/198 (1%) Query: 366 WALFTTMLLISWYVIRR--MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLC 423 L + + + + I + + + L+ + D LT++ NR + Sbjct: 1098 ITLLSQITITAAIAIHQGELHQQLQNANLELKKLSAIDGLTQVANRHRFDVYLEQEWRRL 1157 Query: 424 QTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFC 482 +H S+I D+DHFK ND +GH AGD L A +I +S+ R D+ R GGEEF Sbjct: 1158 MRSRHSLSLILSDVDHFKWYNDTYGHLAGDHCLQQIARVIKTSVGRPADLVARYGGEEFA 1217 Query: 483 VILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSL 542 ++LP SL A VAE+IR K+ + KS ++ SLGV+S +G + L + Sbjct: 1218 IVLPETSLKGALFVAEQIRQKVKNLTIPHTKSAYQCVTLSLGVASLIPSGALSPKALINA 1277 Query: 543 ADRRLYLAKQAGRNRVFA 560 AD LY AK GR+RV + Sbjct: 1278 ADEALYQAKANGRDRVVS 1295 Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 99/269 (36%), Gaps = 17/269 (6%) Query: 302 FDPRELALLAQAMEHDTRGGIRMDSRYVSWERL--DHFDGVLVRVHTLSEGVRGDFGSIS 359 + A Q+++ +R S++V L + + + R S Sbjct: 323 YHLLSKAFSNQSIQSFLFIPLRSRSQWVGCLTLFRQEREWETLWAGRENPDQRNQMPRQS 382 Query: 360 IAL-------TLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGAL 412 W L + M+ L + QA +D +T+L N Sbjct: 383 FVAWCEIQRGVPDWTGEQLKLAEILGLHLYMILTQQRLTHLIHHQASYDPITQLPNWIIF 442 Query: 413 FEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQD- 471 + + V+ +DL+ FK IND GH GD +L A+ + + L + Sbjct: 443 NHRLALALVDATHGSNMLGVLIIDLNQFKRINDSLGHGVGDYLLQKASDRLQNCLESYSF 502 Query: 472 ---VAGRVGGEEFCVILPG-ASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSS 527 + R G F V+L A + EA ++++ E +S I + S+G++ Sbjct: 503 LEPLLARWHGAGFIVLLSQLAYVDEAINFSQKLLNDFQE-PF-YVQSQAIYLGVSIGIAL 560 Query: 528 SEETGDYDFEQLQSLADRRLYLAKQAGRN 556 + GD E L A+ +Y AKQ G+N Sbjct: 561 APYDGDSS-EVLLKNAESAMYQAKQQGKN 588 >UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N773_9GAMM Length = 462 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 5/205 (2%) Query: 357 SISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKA 416 + + ++ A+ + + ++ + + + L+ + D LT ++NR L + Sbjct: 263 TWLWRMLIVIAVVVALFFYRYLLVNQHNRELQRVNKKLEQLSQRDHLTGIHNRYYLDQAF 322 Query: 417 RPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRV 476 + + +QH F+++ +D+D FK IND +GH GD V+ A L+ +R QDV R Sbjct: 323 QQELTRYKRYQHGFTIVMLDIDLFKQINDSYGHVVGDDVIKQIAMLLREHVRDQDVVARW 382 Query: 477 GGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDF 536 GGEEF ++ P SL A +AE +R + + K I ++ S GV+ D Sbjct: 383 GGEEFLILNPETSLDGARTLAEHLRRLIRRTPFTVDK---IDVTVSFGVTDYRAG--EDI 437 Query: 537 EQLQSLADRRLYLAKQAGRNRVFAS 561 E + AD LY AKQ+GR++ Sbjct: 438 ETMIQRADSALYQAKQSGRDKTVVF 462 >UniRef50_B8FCK6 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCK6_DESAA Length = 301 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 114/283 (40%), Gaps = 3/283 (1%) Query: 281 LYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGV 340 + ++ +T + + L+ + G + + + Sbjct: 20 MLTARGHEVTVATNGEEGLEAVATIKPDLILLDLIMPGMDGYAVCEKIKGSPATADIPVI 79 Query: 341 LVRVHTLSEGVRG--DFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQA 398 ++ + + G+ + + I+ + ++ LQ A Sbjct: 80 MLTSKAETADKVRGLEAGASDYVTKPFEEGELVARVNTHLRIKELYESLQETNRQLQELA 139 Query: 399 WHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSH 458 D LT LYN + + + S + D+D FK ND +GHQ GD VLS Sbjct: 140 NRDGLTGLYNHRYFQDAMTKDFQRAMRYHESLSCVLCDIDFFKKFNDTYGHQTGDIVLST 199 Query: 459 AAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIR 518 A ++ SLR D+A R GGEEF ++L A VAER+R + + E IA ++ Sbjct: 200 LARIVEDSLRDTDLAARYGGEEFALVLYHTPAAAAFMVAERLRESVEQHEF-IANDLSLS 258 Query: 519 ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 ++ S+GV++ D + L AD+ LY AK+ GRN+V + Sbjct: 259 VTISVGVATYPHPDIPDHKTLIECADKALYKAKENGRNQVISF 301 >UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID=Q30QX5_SULDN Length = 564 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 108/204 (52%) Query: 359 SIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARP 418 SI L + L + ++ + ++ + + Q L+ A D++T+LYNR E + Sbjct: 359 SIGLIIEAMLLSYLVSYKFIIMEQEKEEEKLKQIELKLLASTDSMTKLYNRRYFTEISAK 418 Query: 419 LAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGG 478 + L + ++ S++ +D+D FK +ND +GHQ GD VL + L+ R D+ R GG Sbjct: 419 VLHLSKREKNNLSILMIDIDRFKVVNDTYGHQFGDEVLIALSRLLVEHQRKSDIVCRYGG 478 Query: 479 EEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQ 538 EEF ++LP SL +A +A++IR+ + M + + + S+GV+ + + D + Sbjct: 479 EEFVILLPNTSLKDATNIAQKIRILVESLTMEAPTNKEFKFTISIGVAQIDVEHEDDIKF 538 Query: 539 LQSLADRRLYLAKQAGRNRVFASD 562 AD LY AK +GRNRV A + Sbjct: 539 ALKRADDALYRAKNSGRNRVCAEE 562 >UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IX34_RHOP2 Length = 350 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 85/304 (27%), Positives = 126/304 (41%), Gaps = 4/304 (1%) Query: 259 PVRTMQQFLRNAIDKNLDGEYQL--YDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEH 316 ++ LR A L DS L L + I A + + Sbjct: 24 EAARLRHELREASQALETLYAALDNVDSGLLILNKELRAVYSNPILHVMFRANSCEEIRQ 83 Query: 317 DTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLIS 376 M + +D D V R+ + G I L + Sbjct: 84 TRPFYADMLAAAAQAVAVDLDDYVARRLAWVQSGDPKPMDLAMIDGKALRCHLAVLPDGG 143 Query: 377 WYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVD 436 +I V+++ L+ A D +T ++NR A + + P S + +D Sbjct: 144 RMLIYSDVTDIVRNAEELERLATTDGMTGIFNRRHFLTLADREWARARRYGRPLSCLMID 203 Query: 437 LDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEV 496 +DHFK+IND FGHQ GD ++ H A L R DV R+GGEEF ++LP L +A V Sbjct: 204 IDHFKSINDDFGHQVGDDMIVHLAKLARDCKRDCDVLARIGGEEFALLLPETDLPQALAV 263 Query: 497 AERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRN 556 AER+R ++ +L+A ++R + S+G ++S T D L ADR LY AK GRN Sbjct: 264 AERLRGEVAASSLLMASG-SVRATVSIGAATSAATID-GISDLMRAADRALYEAKHGGRN 321 Query: 557 RVFA 560 RV Sbjct: 322 RVVC 325 >UniRef50_A7MGE2 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MGE2_ENTS8 Length = 507 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 99/481 (20%), Positives = 173/481 (35%), Gaps = 38/481 (7%) Query: 106 EQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAH 165 E R I L R+ V ++ +L R ++ G L + Sbjct: 30 ETERQARNQAISLARQAEDTFFQV---QLTLDDLSRRADDIFLQPAEWNGPRGLLAQQQR 86 Query: 166 NSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFT 225 + + +Y +R + ++ + + +FI HSQ + +R Sbjct: 87 QLTQLQGLFVYDTRGDWLATSASGFPAQ------ANSADRDYFIWHSQHSD--TGIRIGH 138 Query: 226 SQPEHASNTEPQVTVSVPVD-SNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGE--YQLY 282 A+ E V VS+ ++ + GVL ++ + +QF + Sbjct: 139 VIRSRAT-GELVVPVSMRLNTPEGRFRGVLLATVKLDYFRQFYG-YYEMGPGDTLGITFT 196 Query: 283 DSKLRFLTSSNPDHPTGNIFDPRELAL---LAQAMEHDTRGGIRMDSRYVSWERLDHFDG 339 DS + ++ + + +A + I R + L + Sbjct: 197 DSTVLYVRPFPDSYINRTLSSSPLFTRMLKIAPTGGGAWKSAIDGVPRIFGYATLARY-P 255 Query: 340 VLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSL----- 394 ++V + +R + +I L A+ ++L+ ++ R + Q L Sbjct: 256 LVVSAGYDVDELRAAWWRNNIPTLALNAVLLGVVLVFGVLVLRQIRASLRYQRELIVLRD 315 Query: 395 ---------QWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAIND 445 Q A D LT L NR Q P S++ D+D+FK+ ND Sbjct: 316 DLTRSNHILQDLALLDGLTGLPNRRQFDIYLEQCMTRAQATGAPVSLVMCDIDYFKSYND 375 Query: 446 RFGHQAGDRVLSHAAGLISSS-LRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKL 504 GH AGD L ++ L D R GGEEF +ILPGA+ A +VA R + Sbjct: 376 TLGHVAGDECLKAVGEILHHLPLHKSDRVARYGGEEFAIILPGANAHAAEQVAMRALQAI 435 Query: 505 NEKEMLIAKSTTIR--ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + + + + ++ S G ++ D E L++ AD LY AK+AGRN V + Sbjct: 436 QQARLAHPATPMVEKVLTISAGTATM-TGDDASGETLKNQADEALYQAKRAGRNCVVGAT 494 Query: 563 N 563 Sbjct: 495 G 495 >UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Idiomarina baltica OS145 RepID=A3WMD3_9GAMM Length = 689 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 74/263 (28%), Positives = 114/263 (43%), Gaps = 12/263 (4%) Query: 301 IFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI 360 F +E + A + + R V R +G + I I Sbjct: 438 FFRVQETEVFRWAGKLEKGEVREYKGRQVLSPRHSFEQW-----QQDVDGYAPIWTEIQI 492 Query: 361 ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA 420 A + S Y I ++ + L+ D LT+++NR + + Sbjct: 493 EAAKTLA-EDLAIGASAYQIEQLNQELTEANQRLEHLVHTDALTQVWNRYHMEQTLEEEV 551 Query: 421 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 K C+ H +VI +D+DHFK +ND +GH GD+VL + I LR+ DV GR GGEE Sbjct: 552 KRCKRHGRDLAVILLDIDHFKRVNDDYGHDVGDKVLKLISEAIHQWLRSSDVFGRWGGEE 611 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ 540 F +I P L A ++AER+R +L+ + +++AS GV+ + D + L Sbjct: 612 FLIIAPETDLESANQLAERLRRRLSNLQF----DKVGQVTASFGVAELLPSEDRN--SLV 665 Query: 541 SLADRRLYLAKQAGRNRVFASDN 563 AD LY K++GRN V S Sbjct: 666 KRADNALYQVKESGRNSVEVSPG 688 >UniRef50_A5IAA0 Sensor histidine kinase n=5 Tax=Legionella pneumophila RepID=A5IAA0_LEGPC Length = 714 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 77/312 (24%), Positives = 136/312 (43%), Gaps = 11/312 (3%) Query: 257 SIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFL---TSSNPDHPTGNIFDPRELALLAQA 313 + + Q+ LR G + +L TS P F P + + + Sbjct: 406 DVLSKYSQRLLR-----FSSGYLFIMHPSKNYLEKTTSWGDPQPHELTFTPEQCWAIRRG 460 Query: 314 -MEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGD-FGSISIALTLLWALFTT 371 + H I + +VS+ +L + G + +++ L+ Sbjct: 461 RVHHVDSSHIELLCGHVSFSLEQQDLSLLCVPLMAQNDIYGLLYLEVNLKQLPLFDENQR 520 Query: 372 MLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFS 431 +L+ ++ + + L SL++Q+ D LT LYNR L + + + F+ Sbjct: 521 LLITAFAELTALALANVRLGESLRYQSIRDPLTGLYNRRYLEDFLFKQLHQAERTKASFA 580 Query: 432 VIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLT 491 ++ +DLDHFK IND FGH+AGD VL ++++ +R DVA R GGEEF ++L Sbjct: 581 ILMLDLDHFKKINDTFGHEAGDFVLKEIGQILNNDIRLGDVATRYGGEEFVLLLFDVDAN 640 Query: 492 EAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAK 551 A A+ +R +++ ++ +++AS+G+S + ++L AD+ LY AK Sbjct: 641 AAKTRADNLRSAISKLQVKYGAQYVGQVTASIGISIYPDDA-KSPDELIEAADKALYQAK 699 Query: 552 QAGRNRVFASDN 563 GRN V Sbjct: 700 NKGRNMVLLFSE 711 >UniRef50_Q0VL34 GAF/PAS/GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q0VL34_ALCBS Length = 487 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 99/359 (27%), Positives = 144/359 (40%), Gaps = 21/359 (5%) Query: 216 NRHRAVRWFTSQPEHASNTEPQVTVSVPVDSN----NYWYGVLGMSIPVRTMQQFLRNAI 271 + R S E ++S ++ + V M + + R+A Sbjct: 135 DPSP-RREAFSIEEMEFLELMGKSLSQTLEQDRLSQQQQAAVSKMEENMALFEGAFRHAA 193 Query: 272 DK----NLDGEYQLYDSKLRFLTSSNPDHPTGNIFDP-RELALLAQAMEHDTRGGIRMDS 326 + G + + L + + + + F L + H S Sbjct: 194 IGMAIVSPQGGWMRVNQALCSILGYDEEALLASDFQTITHPDDLETDLHHVEEMLTGKRS 253 Query: 327 RYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSN 386 Y +R H +G +V V VR GS L+ + + T + + +R Sbjct: 254 SYWMKKRYIHKNGHIVWVLLAVSLVRNGDGSPRYFLSQIEDI--TAQVTAELTLREKQGE 311 Query: 387 MYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDR 446 + L L A D LT LYNR L E R C+ P SVI +D+DHFK ND Sbjct: 312 LEELNQELASMARTDPLTGLYNRLVLMEGLRQEFSRCERRSEPMSVIFMDVDHFKQYNDS 371 Query: 447 FGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNE 506 +GH GD L A + +R DV R GGEEF +LP A+ +A VAER R + E Sbjct: 372 YGHVEGDAALQAVAEALRPVIRDTDVLARYGGEEFVALLPTANSQDAERVAERCRRAVAE 431 Query: 507 KEMLIAKSTTIRISASLGVSSSEETGDYD----FEQLQSLADRRLYLAKQAGRNRVFAS 561 S + +S S+GV++ + D E L S ADR LY+AK AGRNRV + Sbjct: 432 IS-----SLSRPVSLSVGVATLRFGDEADETKSPESLLSAADRALYVAKGAGRNRVHTA 485 >UniRef50_C1D915 GGDEF domain protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D915_LARHH Length = 879 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 104/467 (22%), Positives = 160/467 (34%), Gaps = 61/467 (13%) Query: 124 LPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFY 183 + V+ V+E L RE + A LE+ ++ Sbjct: 434 AALVDVTQRCVAEARLALREQQLDMALRGAELEL--------WDWNLE-------SGSLE 478 Query: 184 VSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVP 243 + +P+ + W H P + V Sbjct: 479 LLHPRQTDPVCLPSWQALIHSDDWARVKL-------------IFDMHLVGHSPMIEVEYR 525 Query: 244 VDSNNYWYGVLGMSI---------PVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNP 294 V + W V PVR + L K + E + KL LT+ P Sbjct: 526 VRDDERWRWVQCRGRVMDRDEQNRPVRALGTHLDVTQRKLSESERRATQRKLEKLTAQLP 585 Query: 295 DHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLS------ 348 R L A + G + ++ D F V+V Sbjct: 586 SVVFQL--RRRADGLYAMPYANPALGTLCGVDPLAVRDQADAFFAVIVSADREECLASLE 643 Query: 349 ------EGVRGDFGSISIALTLLWALFTTM------LLISWYVIRRMVSNMYVLQSSLQW 396 + R +F ++ + W L + W+ +S + L Sbjct: 644 HSSCHLQSWRMEFRIVNPLGEIRWMLGHASPEKDLDGSVLWHGYLNDISERKAHEDDLVK 703 Query: 397 QAWHDTLTRLYNRGALFEKARPLAKLCQTH--QHPFSVIQVDLDHFKAINDRFGHQAGDR 454 QA D LT L NR + A C+ + + +V+ +D+DHFK +ND GH GD+ Sbjct: 704 QASTDGLTGLANRRSWLVHANRELTRCRRYPDEADCAVVMLDIDHFKRVNDSHGHAVGDQ 763 Query: 455 VLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKS 514 VL A + + LR D GR+GGEEF ++LP S A AER+ K+ Sbjct: 764 VLQELARRMQAGLRETDCLGRMGGEEFAILLPQTSQDGACLFAERLCRKIAGVPFATEAG 823 Query: 515 TTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + ++ SLGVS + + D + + AD LY AK GRNRV A+ Sbjct: 824 ALV-VTISLGVSQMQ-SDDASVDCALARADGALYAAKSGGRNRVEAA 868 Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 65/209 (31%), Gaps = 9/209 (4%) Query: 197 TRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGM 256 + + F+ H +E ++ + + S V + + GVL Sbjct: 127 PKAISIADREHFLVHLDQE--VSSLYISKP-VFGRLSQAWSIQFSRQVRRHGKFAGVLVA 183 Query: 257 SIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEH 316 S+ + L++ L +L + P + + + Sbjct: 184 SVSPSYFSSLFHEVSAGD-RDVVFLFNQNLDYLARTRMQDEVMGRQLPESYRWITELTSN 242 Query: 317 --DTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLL 374 D+R G +R + + + V V + + + L + ++L Sbjct: 243 RFDSRAGPDGLARVYGIHSVARW-PLYVGVGIELQSIMAPVDEAIESSLFGNLLGSLLIL 301 Query: 375 ISWYVIRRMVSNMYVLQSSLQWQAWHDTL 403 ++ I ++ + QS L+ A +D L Sbjct: 302 LAVGWIYWLLYRQWRQQSLLK--AIYDVL 328 >UniRef50_C7I354 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thiomonas intermedia K12 RepID=C7I354_THIIN Length = 752 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 112/521 (21%), Positives = 201/521 (38%), Gaps = 30/521 (5%) Query: 63 VANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRR 122 V+ AL + + L+ G +++ F S++ + F L R Sbjct: 236 VSAALSAVISLLIVTATVLQQGPMYSMLGSDRFMSMQIILLAF---ASAMLLAGLLANER 292 Query: 123 TLPVNGVSDALVSEGNLLSRENESL-DNEITAALEVGYLLRLAHN------SSSMVEQAM 175 T+ + V D + ++R +L ++ T ++ + L + S + Sbjct: 293 TVALKQVRDINATLEKKVNRRTAALQISQATTQAQLRFQESLLNALPNPVAFSDPQGRFT 352 Query: 176 YVSRAGFYV--STQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASN 233 V+ A + + P + R + + W E +++ P + Sbjct: 353 RVNVAFNLLVGLSGPEIHGRTGTQILGTTLGRIW--EDMDSELLSGSLQVTREAPYLHPD 410 Query: 234 TEPQVTVSVPVDSNN----YWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFL 289 EP V + + GV+ + ++Q + + + +S + + Sbjct: 411 HEPTVWILNKALVRDAVSRQIVGVVTSMQDITAIKQLQQQLSEDEQRFRFLAEESPVPLV 470 Query: 290 TSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSE 349 + D +F + L + + G M + D L R + Sbjct: 471 ITRTSD--AALLFSNKAADSLFRGSYAEHAGQS-MRPLWGDSVDRDQLLARLQREGGIVR 527 Query: 350 GVRGDFGSISIALTLLWALFTTMLLI-----SWYVIRRMVSNMYVLQSSLQWQAWHDTLT 404 GV F T +W L + + + ++ +S L+ A+ DTLT Sbjct: 528 GVEAQFRRFD--GTEVWLLLSVTRGRYRDDDALIFAFKDITEAKARESELRNLAYTDTLT 585 Query: 405 RLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLIS 464 + NR +A + Q PF V+ +D+D FK INDRFGHQ GD V+ A Sbjct: 586 GIPNRRYFLARAALELRRAQREGSPFVVLALDIDRFKQINDRFGHQVGDAVIRCFAQTCM 645 Query: 465 SSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE-MLIAKSTTIRISASL 523 LR D+ GR+GG+EF ++LP + A +VA+R+RL + E + + + ++ S+ Sbjct: 646 QQLRGPDLCGRLGGDEFAILLPQTTRQVAFDVAQRLRLSIQEASCLPSSAPDGLTLTTSI 705 Query: 524 GVSSSEETGD-YDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 G++ T D ++L AD+ LY AKQAGRNRV Sbjct: 706 GIAEFLPTSTLMDADELLDRADQALYRAKQAGRNRVEIWTG 746 >UniRef50_Q21HV6 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q21HV6_SACD2 Length = 301 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 118/296 (39%), Gaps = 7/296 (2%) Query: 268 RNAIDKNLDGEYQLY----DSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIR 323 + + +++ L + + + + + ++ + G+ Sbjct: 3 KILVVDDVEDNIVLLTFDLEDDGFDVEPARSGQECLDKVAAEKPDMILLDIRMPGLSGLE 62 Query: 324 MDSRYVSWERLDHFDGVLVRVHTLSEGVRG--DFGSISIALTLLWALFTTMLLISWYVIR 381 S E ++V T + + D G+ + + S + Sbjct: 63 TLEILKSDEATRMIPVIMVSATTGDQSIIRALDLGAHDFVSKPIEYPVLAARMRSALRLI 122 Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 + ++ L+ A D LT + NR + F+ A H +++ +D DHFK Sbjct: 123 QAKRDLEKANKELERLATRDPLTGINNRRSFFKLAEAELTKTIRHGRDIALLMLDADHFK 182 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 IND +GH AGD L + ++ R D+ R+GGEEF + P +L A VAERIR Sbjct: 183 MINDTYGHAAGDEALLTITEICQNACRESDILARLGGEEFAICCPDTNLEGAYAVAERIR 242 Query: 502 LKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 + + S + I+ S+G+++ + D ++ AD LY AK+ GRNR Sbjct: 243 QQCENTVIEH-NSASFGITLSIGITTFVPSQDKSITEMLQRADNLLYQAKEMGRNR 297 >UniRef50_Q47FN5 Response regulator receiver modulated diguanylate cyclase n=3 Tax=Betaproteobacteria RepID=Q47FN5_DECAR Length = 313 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 1/191 (0%) Query: 373 LLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSV 432 +++ + + + L + D+LT + NR E + + H + ++ Sbjct: 121 IVLMRASLLAVTRKLDAANQELIRISSTDSLTGVANRRYFDEAMSIEWRRARRHSNSIAL 180 Query: 433 IQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLT 491 + D+D+FK ND +GHQAGD L A IS R D R GGE+F VILP S+ Sbjct: 181 LMCDIDYFKLYNDTYGHQAGDECLRKIAAAISRHTERPSDTVARYGGEKFAVILPETSIG 240 Query: 492 EAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAK 551 A VAE+IR E + A S T ++ S+G++S+ D + L AD+ LY AK Sbjct: 241 GALMVAEKIRQATKELNITHASSPTGQVGLSIGIASAAPGFDNPPDDLILAADKALYRAK 300 Query: 552 QAGRNRVFASD 562 + GR+RV+ +D Sbjct: 301 KEGRDRVYRAD 311 >UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA43_HYDS0 Length = 610 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 63/178 (35%), Positives = 91/178 (51%), Gaps = 6/178 (3%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 ++ L L Q+ DTLT +YNR L +K L + ++ P SVI D+D FK Sbjct: 438 DITKEKELSELLLKQSIEDTLTGIYNRRYLKDKLERHVNLAKRYERPLSVIMFDIDFFKH 497 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 IND FGH GD+VL + ++S ++R D+ R GGEEF ++ P + +A +AE++R Sbjct: 498 INDTFGHDVGDKVLIAISKVVSENIRNTDIFARYGGEEFIIVAPETTKEDAKILAEKLRS 557 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + I ++ S GV S E+ E L D LY AK+ GRNRV Sbjct: 558 LIRNLHFEEG----INVTCSFGVVSLEK--PDTKETLLKRVDNALYEAKRTGRNRVVV 609 >UniRef50_Q88HW1 GGDEF domain protein n=5 Tax=Pseudomonas RepID=Q88HW1_PSEPK Length = 522 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 89/438 (20%), Positives = 158/438 (36%), Gaps = 26/438 (5%) Query: 139 LLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTR 198 L R + I L + + +Y + V+ Q + + Sbjct: 87 LAERLEGDGFDHIDRPRLHALLAQQKRIMPQLHGLFVYGPDGSWIVTDQAAIPPK----- 141 Query: 199 YYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMS 257 + +F H + S S + + +S + ++ + GVL + Sbjct: 142 -ANNADRDYFAYHRSHNDPGVH---IGSVVRSRSTGDLIIPISRRLEHADGSFAGVLLGT 197 Query: 258 IPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNP-DHPTGNIFDPRELAL----LAQ 312 I V ++ + + G L L + G E+ A Sbjct: 198 IKVAWFVRYYGD-FKIDERGALVLAKRDGTLLVRRPFVEQVIGRSLANSEIFRNHLPYAT 256 Query: 313 AMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTM 372 + + R + L + ++V E + + +I + L Sbjct: 257 EGVAEAVAVVDGTPRLYGYRALSSY-PLVVEAGLSRESIVAPWRYDAIKSVAVLLLLLVG 315 Query: 373 LLISWYVIRRMVSNM-------YVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQT 425 L V+ R + +L+ A D+LT L NR L P + + Sbjct: 316 LAAFGGVVLRQLRERIVIERALLQAHQTLKALALTDSLTGLGNRRRLDGVFEPELRRARR 375 Query: 426 HQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVI 484 +P +++ +DLD+FKA ND +GH AGD+ L A ++ +L R D+A R GGEEF ++ Sbjct: 376 QGYPLALVMLDLDYFKAYNDHYGHPAGDQCLRRFAEVLQQALKRPADLAVRYGGEEFTLL 435 Query: 485 LPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSE-ETGDYDFEQLQSLA 543 LP A + + ++ L + + A S R+S S G++ + E L + A Sbjct: 436 LPDTDGRGAELLVQELQQLLRRQALEHAASPLGRVSFSAGIAVVDLAREGGTIEALVAAA 495 Query: 544 DRRLYLAKQAGRNRVFAS 561 D LY AKQ GR+ + Sbjct: 496 DGALYQAKQQGRDGYCVA 513 >UniRef50_Q1JWQ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWQ3_DESAC Length = 648 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 67/186 (36%), Positives = 100/186 (53%), Gaps = 2/186 (1%) Query: 374 LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 L+ ++ M +LQ L+ A D LT NR LF +L + ++ SVI Sbjct: 463 LVGMVGTVLDITTMVLLQQKLERLATTDELTGAVNRRQLFIYTDQFCQLAKRYKKALSVI 522 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEA 493 DLDHFKA+ND +GH AGD VL I S LR D+ R GGEEFC+++P A Sbjct: 523 FYDLDHFKAVNDTYGHAAGDEVLRQITTRIQSMLRDTDILARYGGEEFCILVPETDGDHA 582 Query: 494 AEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQA 553 AERIR +++E + ++ +++++ S+GV++ +E L AD+ +Y AK+ Sbjct: 583 YLFAERIRQRISESSVNLSSGESLQVTVSMGVATYQEDEQGS--SLIDRADQGVYEAKRR 640 Query: 554 GRNRVF 559 GRN V Sbjct: 641 GRNCVV 646 >UniRef50_Q486E7 Sensory box/GGDEF domain protein n=2 Tax=Proteobacteria RepID=Q486E7_COLP3 Length = 428 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 82/407 (20%), Positives = 153/407 (37%), Gaps = 18/407 (4%) Query: 158 GYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVT----QPWFIGHSQ 213 L +S + Y S ++ + Sbjct: 30 SVAFELVSCNSRYEDLMGYSSAKALGQPLTTIFPRYIHNPLKEAFIHCKNERIALETEIV 89 Query: 214 RENRHRAVRWFTSQPEHASN-TEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAID 272 + + + W + ++ E + V+ +++ ++ + + NA D Sbjct: 90 LDYKGQERCWRSIVSPIVNSADEKFRIIQTCVEITEKKVLEKQLNLSMKRFEAVVNNAYD 149 Query: 273 KNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSR-YVSW 331 G + + + L + ++F E ++ Q + + YV Sbjct: 150 ----GIITIDEQQNVKL----FNEAAQSMFGYSEQEIMGQPLTKLLPEKYQAKHHGYVEG 201 Query: 332 ERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQ 391 + D ++ +G+R D +I +T+ + + + R +S L Sbjct: 202 FKRSQVDSRPMQTRAAVQGLRKDGSEFAIEVTISKIRIADN--VEFTAVIRDISEKNQLL 259 Query: 392 SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQA 451 L + D LT LYNR E + + FS++ +D+DHFK+INDR+GH Sbjct: 260 EELILSSRRDPLTELYNRRYFTELLHSEITRSRRFKRGFSLLMLDIDHFKSINDRYGHAC 319 Query: 452 GDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLI 511 GD L + +++S+R D R GGEEF V+LP A VAE+IR + E I Sbjct: 320 GDAALIAFSKAVTNSIREVDTICRWGGEEFLVLLPEIPKVTAMVVAEKIRKNIENLE-TI 378 Query: 512 AKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + I+++ S+G+ + + + D+ LY AK GRN++ Sbjct: 379 YEGDLIKVTVSIGL-EYFSGDAIEMSSMINKVDQILYRAKDTGRNKI 424 >UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D439_DEIDV Length = 633 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 88/322 (27%), Positives = 136/322 (42%), Gaps = 9/322 (2%) Query: 245 DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSK--LRFLTSSNPDHPTGNIF 302 + ++ L +S + + Q Y S+ L+ S N + ++F Sbjct: 317 EMSDMLQACLTISEVEQVVAQHASELFPGVGGALYAFESSRTVLQETISWNGGSSSSSVF 376 Query: 303 DPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIAL 362 P E L + G + R+ S + V L++G + Sbjct: 377 VPVECWGLRRGRPFSALGEEGLHCRHSSASHST------LCVPMLAQGETVGLLHLEAGS 430 Query: 363 TLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKL 422 L + + L+ SL+ Q+ D LT LYNR L E Sbjct: 431 AAPLTRRQERLAQTVAETAALAIVNLRLRESLRQQSIRDPLTGLYNRRYLEESFERELHR 490 Query: 423 CQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFC 482 Q P +VI +D+DHFK ND GH+AGD +L L+S +RA+DVA R GGEEF Sbjct: 491 AQRSDDPIAVIMLDIDHFKHFNDSHGHEAGDELLRALGQLLSGCIRAEDVACRYGGEEFA 550 Query: 483 VILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSL 542 ++ PG +L +A A+++R + + ++S SLGV++ + G + L Sbjct: 551 MVFPGMTLDQATRWADQLRHTVESTQFASRGEALEQVSVSLGVAAFPQHGRH-LADLIRA 609 Query: 543 ADRRLYLAKQAGRNRVFASDNA 564 AD LY AK+ GRNRV +D A Sbjct: 610 ADAALYRAKREGRNRVITADGA 631 >UniRef50_Q2BQL8 Probable two-component response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQL8_9GAMM Length = 505 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 81/338 (23%), Positives = 128/338 (37%), Gaps = 15/338 (4%) Query: 231 ASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLT 290 A + + + P D ++ G +S + D + + Sbjct: 166 AEDGRVSLGLPSPEDLKAFFKGEDIISQEQVR-----ESCPRAEQQTIAIFCDHGIEKIW 220 Query: 291 SSNPDHPTG-NIFDPRELALLAQAMEHDTRGGIRMDS--RYVSWERLD-----HFDGVLV 342 NI P L + D + + + ++ L + D + Sbjct: 221 PMIATLRNEFNILLPSSKGELTTLLAEDQPDLLLLCTEQQWQEMLSLCQEITANKDDYTL 280 Query: 343 RVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDT 402 V +S + + L +++ + Q L A D Sbjct: 281 PVAFVSADLDDQRELDAYNAGAADFLTLNRAPAVLQSRIQILMQLKQSQDQLARSARVDG 340 Query: 403 LTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGL 462 LT++ NR + Q + ++I +D+DHFK ND +GH AGD L A Sbjct: 341 LTQVNNRREFERNIEMEWRRAQRSKRSLALIMLDIDHFKPFNDGYGHLAGDGCLRTVAQT 400 Query: 463 ISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA-KSTTIRIS 520 I S+ RAQD+ R GGEEF VILP L A +AERIR + + ++ ST I+ Sbjct: 401 IKHSIQRAQDMVCRYGGEEFVVILPETDLDGAQMIAERIRKAIAKLKINHEFSSTDNTIT 460 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 S GV+ + + +L LAD+ LY AK GRN+V Sbjct: 461 ISAGVACLSPSQEGSPHELILLADQGLYQAKAQGRNQV 498 >UniRef50_A5EDY2 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=Bradyrhizobium RepID=A5EDY2_BRASB Length = 636 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 82/307 (26%), Positives = 126/307 (41%), Gaps = 7/307 (2%) Query: 264 QQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELAL---LAQAMEHDTRG 320 +Q L +A+ + L + +T D G + L +Q + Sbjct: 315 RQRLASALAAKEENFRLLAEGSSDIVTRIELDECIGYVSPSTMRVLGWHPSQLLGKRAIS 374 Query: 321 GIRMDSRYVSWERLDHFD-GVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYV 379 G+ R E LD G++ R D I + T+ L + Sbjct: 375 GVNPLDRPQLQEMLDQIKKGIVDEARATYRMRRRDKSEIWVEATIRATRRPDGTLDGFVA 434 Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 + R V+ LQ L+ A D LT L NR E+ + +++ +D+DH Sbjct: 435 VTRDVTQQKALQGRLETLAIEDGLTGLANRRRFDERLLEEWGRAYRDKTSLALLMIDIDH 494 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 FKA ND +GH AGD L AG+++ R+ D+A R GGEEF ++LP A + E Sbjct: 495 FKAFNDSYGHPAGDECLHTVAGILADEAQRSSDLAARYGGEEFAILLPNTDAAGCARLGE 554 Query: 499 RIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYD--FEQLQSLADRRLYLAKQAGRN 556 RIR L+E + + ++AS+G + + L ADR LY AK GR+ Sbjct: 555 RIRRALHEARITHDHNGPGIVTASIGGAVCRPGFERSAGPASLIEAADRALYAAKDGGRD 614 Query: 557 RVFASDN 563 RV + Sbjct: 615 RVVMAGE 621 Score = 71.6 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 41/295 (13%), Positives = 82/295 (27%), Gaps = 16/295 (5%) Query: 104 EFEQHRDEHAWKIELNRRRTLPVNG---VSDALVSEGNLLSRENESLDNEITAALEVGYL 160 + R+ L R T V ++D+L+ ++ I L Sbjct: 40 RNNELRNAEVELGNLTRSLTQHVEDTFELADSLIRGVVTALERDDGKPGGIERLQAF--L 97 Query: 161 LRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRA 220 N + Y + +T +V Y + +F H R + R+ Sbjct: 98 TARKANLGRVRGIFAYDQSGAWLATT------EDVNLSNYNNADRDYFARH--RISADRS 149 Query: 221 VRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEY 279 + S + +T+S ++ + GV+ +I V QF R D G Sbjct: 150 LLIGRPVRS-KSGGQWVITLSRRWNHADGRFGGVVAATIDVAYFAQFYRQ-FDVGHRGTI 207 Query: 280 QLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDG 339 L L ++ +P E D + + Sbjct: 208 SLMARDGTLLADNSIPNPQELGRPMLETIPYHPLSGVLRFRLADDDLDRIGTYQHAQRYP 267 Query: 340 VLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSL 394 LV V + ++ + +++ + + + L S+L Sbjct: 268 FLVLATRTQADVLAVWRRDALIRVGVLVCLVALVVAIGAFLVKQLLQRQRLASAL 322 >UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087A8_SHEFN Length = 321 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 5/190 (2%) Query: 372 MLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFS 431 LI I ++ Y L+S L+ A D LT L+NR + + PFS Sbjct: 137 GTLIGLIGISTDITAAYHLRSKLERLANTDPLTGLFNRRSFTSFCEHEFFRATRYFQPFS 196 Query: 432 VIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLT 491 ++ +D+D FK +ND +GH GD V+ A + + +R DV R+GGEEF ++LP + Sbjct: 197 LMIIDIDLFKKVNDTYGHLVGDEVIKRVANICNEHVREADVLARIGGEEFAILLPDTDID 256 Query: 492 EAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAK 551 A +AER+R + + T I+ S+GV++ + D F ++ AD+ LY +K Sbjct: 257 SAYVLAERLREA----QQQYEEQKTPSITISIGVATLR-SQDKAFLEIFKRADKALYSSK 311 Query: 552 QAGRNRVFAS 561 GRN V + Sbjct: 312 NVGRNSVNVA 321 >UniRef50_B3E243 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Geobacter lovleyi SZ RepID=B3E243_GEOLS Length = 646 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 85/291 (29%), Positives = 123/291 (42%), Gaps = 27/291 (9%) Query: 274 NLDGEYQLYDSKLRFLTSSNPDHPTG----NIFDPRELALLAQAMEHDTRGGIRMDSRYV 329 + G + + + PD G ++F E I+ RY Sbjct: 376 DGQGRITFVNERATEILGFAPDELNGQIAHDLFHRHAGGNQTVLEECPIYRVIQTRGRYE 435 Query: 330 SWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYV 389 E+ +G L+ V S+ + + +I + R ++ Sbjct: 436 GEEQFIQKNGDLLMVEVASQ-----------------PMLKSGRIIGSVTVFRDITERKQ 478 Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 L+ L+ + D LT +YNR L E + H PFS+I +D+DHFK +NDR+GH Sbjct: 479 LEEQLRLLSITDPLTGVYNRRFLQETLLKELCRAERHGEPFSLIMLDIDHFKQVNDRYGH 538 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 GD+VL H LI +R+ D R GGEEF V+LP L AA + L + + Sbjct: 539 DVGDQVLRHLVKLIQKRIRSSDCLARWGGEEFIVLLPHTGLLAAAAL---AETLLEDLRV 595 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 K ++AS GV+ S EQL AD +YLAKQAGRN V A Sbjct: 596 SELKG-VGCVTASFGVAVSRPG--DTVEQLGQRADALMYLAKQAGRNCVRA 643 >UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Cyanobacteria RepID=B7KHV9_CYAP7 Length = 1262 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 60/183 (32%), Positives = 90/183 (49%), Gaps = 1/183 (0%) Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 + + L+ + D LT++ NR + Q S+I D+DHFK Sbjct: 1080 ELYQQLESANLELKKLSCLDGLTQVANRHRFDMYLDQEWRRLMRSQQFLSLILCDVDHFK 1139 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERI 500 ND +GH AGD+ L A +I +++ R D+ R GGEEF +ILP L A VAE+I Sbjct: 1140 GYNDTYGHLAGDQCLQQVAQVIKNAVGRPADLVARYGGEEFAIILPDTPLRGALYVAEQI 1199 Query: 501 RLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 R ++ + +ST ++ S GV+S + + L + AD LY AK GRN+V Sbjct: 1200 RQQVQYLTIPHPQSTHQWVTLSSGVASFIPSAALSPKALINAADEALYQAKANGRNQVVF 1259 Query: 561 SDN 563 S + Sbjct: 1260 SPS 1262 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 20/211 (9%) Query: 354 DFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALF 413 G + L L + VI++ ++ + ++ QA +D +T+L N Sbjct: 376 QRGVREWSTDELKLAEVLGLHLYMIVIQQRLTRL------IRHQASYDVITQLPNGIIFN 429 Query: 414 EKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQD-- 471 + + V+ +DL+ FK IND GH GD +L+ + ++L D Sbjct: 430 HRLSLALVDAVNQGNMLGVVILDLNQFKRINDSLGHGVGDFLLTKVRDRLQNAL---DTY 486 Query: 472 -----VAGRVGGEEFCVILPGAS-LTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGV 525 + R G F ++L S E+ V +++ E +S I + ASLG+ Sbjct: 487 SIFNPLLARWHGARFIILLSKLSYSDESVMVCQKLLNDFQE-PF-YVQSQAIYLGASLGI 544 Query: 526 SSSEETGDYDFEQLQSLADRRLYLAKQAGRN 556 + + GD E L A+ +Y AK+ G+N Sbjct: 545 ALAPYDGD-TAEILLKNAESAMYEAKKQGKN 574 >UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U4U5_MARAV Length = 571 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 3/204 (1%) Query: 360 IALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPL 419 + + ++ T +IS+ + +++ ++ Q L+ QA D LTRL+NR + + Sbjct: 363 VGIGIVLEALTLAFIISYRI--KVLEDIRSKQDELKRQASTDPLTRLFNRRYFMAEGEYV 420 Query: 420 AKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGE 479 + +T P SVI +D+DHFKA+ND GH GD VL A + R +D+ R GGE Sbjct: 421 LEQARTSGEPLSVIAIDIDHFKAVNDTHGHNVGDLVLVEVASVFRQFSRDRDLVARFGGE 480 Query: 480 EFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQL 539 EF ++LPGA LTE AERIR + + +R++ S+GV+ E Sbjct: 481 EFVILLPGADLTEGFGCAERIRNAVEAMVIDGGDGLAVRVTVSVGVAEVNPL-LESVEGA 539 Query: 540 QSLADRRLYLAKQAGRNRVFASDN 563 ADR LY AK GRNRV D Sbjct: 540 VKRADRSLYEAKAGGRNRVCGFDG 563 >UniRef50_C7HYK2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomonas intermedia K12 RepID=C7HYK2_THIIN Length = 780 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 97/360 (26%), Positives = 153/360 (42%), Gaps = 30/360 (8%) Query: 222 RWFTSQPEHA--SNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEY 279 RW + +PQ+ ++VPV+ N++ + ++ + A Sbjct: 176 RWVIPLRLIVKNAAGQPQLLIAVPVELNDF----------LERWRRSVAAAEYAMPGMSI 225 Query: 280 QLYDSKLRFLTSSNPDHPTG--NIFDPRELALLAQAMEHDTRGGI----------RMDSR 327 L + L + + LA+A H G R Sbjct: 226 ALMRADGYLLARWPAPKTDDLPRFYSAKRQGELARAARHAPDGATSGVFSGRVDSDDIPR 285 Query: 328 YVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIR----RM 383 +W RL H+D VLV + + DF + AL+ +L +++ ++R R Sbjct: 286 LGAWVRLPHYD-VLVNMTVPRALIWRDFWRAYWPALTILALWLAVLTLAYRLVRKQAERD 344 Query: 384 VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAI 443 + + + A D+LT L NR + E + + H ++++ DLDHFK I Sbjct: 345 SAQLRDRSEIMYRLANQDSLTGLLNRRGMGEYLQRAHDRARDHGIGYALVLFDLDHFKLI 404 Query: 444 NDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLK 503 ND FGH AGD VL A L+ + +R +D R GGEEF V+LP +SL A AE++R Sbjct: 405 NDGFGHAAGDAVLQQVAHLLQTRVRKEDQVARWGGEEFLVLLPDSSLQTAHATAEKLREL 464 Query: 504 LNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 ++ M + +R++AS GVS+ E G +L D LY AK GRNRV + Sbjct: 465 ISHTRMSVG-GAELRLTASFGVSAWEPGGPLASAELLGQCDSALYNAKAGGRNRVKQFEG 523 >UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZM8_9PROT Length = 578 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 1/222 (0%) Query: 339 GVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQA 398 G + + + G + + L + + +S+ ++ L+ A Sbjct: 352 GACDQASFEAPILPPSGGRLDTMVLKSAYLDDEGRPVGVIGVLTDISDRKAMERELRRLA 411 Query: 399 WHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSH 458 D+LT +NR A + + +P +++ +D+D+FK+IND GH GD L Sbjct: 412 TTDSLTGAFNRRHFLAAAGTELERANRYGNPLTLLMLDVDYFKSINDAHGHGTGDDALRR 471 Query: 459 AAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIR 518 + +LR DV GR+GGEEF V+LP + A AER+R ++ + + + + Sbjct: 472 LVEGLRHALRDIDVIGRLGGEEFAVLLPETGMAGALITAERLRAQVADLRLDLPDGGQLA 531 Query: 519 ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + S+G+++ D E + + AD+ LY AK GRNRV A Sbjct: 532 FTVSIGIAA-PRAEDGSVEAVLARADKALYRAKDEGRNRVCA 572 >UniRef50_Q4USH9 Sensor histidine kinase n=3 Tax=Xanthomonas campestris pv. campestris RepID=Q4USH9_XANC8 Length = 578 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 103/491 (20%), Positives = 171/491 (34%), Gaps = 17/491 (3%) Query: 72 QYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSD 131 Q +V++L L +R + + D + R + + + G+ Sbjct: 83 QTSVERLPILIGNLRRKIADNPSQVAHLDQLHHLVDTRLKQIQHVLDVYADS----GLEP 138 Query: 132 ALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLF 191 A S R + + ++ L SS + + A + + Sbjct: 139 ARTSIRQTAFRTTSVIREQALTMVQREQELLALRAESSRQSALLLLILALAGIPLGLAVV 198 Query: 192 TRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWY 251 + H+ R N+ Q A +++ Sbjct: 199 GTVYGLLMRELRHRAQAERHAARANQELGESIGALQRSAAD-------LNLLSRYTGLLQ 251 Query: 252 GVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYD--SKLRFLTSSN-PDHPTGNIFDPRELA 308 + + + L + + Y L + ++ P + + P E Sbjct: 252 SCVSAEEALDVTSRTLAHLLPGIAGSVYLLRASQDRAEVISHWGTPLVHSASHLLPEECW 311 Query: 309 LLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWAL 368 L + H R + L + G + ++ + Sbjct: 312 ALRRGQPHLIEDLARDAP--CAHIDLPDASVAITTACLPMSAQGTQLGFLFLSAPGPAPM 369 Query: 369 FTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQH 428 + + + + L+ SL+ Q+ D LT LYNR L E C Sbjct: 370 PRLEIAEAAAEQLSLALSNLRLRESLRRQSIRDALTGLYNRRYLEEALSHELARCARRDL 429 Query: 429 PFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGA 488 P SV+ +D+DHFK ND GH GD +L+ L+ + LRA+DVA R GGEEF VILP Sbjct: 430 PLSVLMLDVDHFKQFNDGQGHAGGDLLLAAVGELLLTRLRAEDVACRYGGEEFTVILPET 489 Query: 489 SLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLY 548 EA VAE+IR + + + R++AS+GV+S G+ L AD LY Sbjct: 490 DGEEAMRVAEQIRGHIAALAVSDGQRALPRVTASIGVASFPADGELG-SALIQKADAALY 548 Query: 549 LAKQAGRNRVF 559 +AK+ GRNRV Sbjct: 549 VAKRQGRNRVE 559 >UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6I5_BREBN Length = 530 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 116/497 (23%), Positives = 191/497 (38%), Gaps = 68/497 (13%) Query: 116 IELNRRRTLPVNGVSDALVSEGNLLSRENESL--DNEITAALEVGYLLRLAHNSSSMVEQ 173 + LN + ++ DAL+ + + S+ + A +V L L +++ Sbjct: 52 LTLNHTSAIKMSHTLDALIKSMRSSLQYSASIFSNRNEMTADDVYSKLELIRRTNNYFNS 111 Query: 174 AMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASN 233 V G S P YV + +S Sbjct: 112 VTVVDETGRVQSVSPGSIG-----TVGSYVKTETAKMALALKKP----YISKPYV-TSST 161 Query: 234 TEPQVTVSVPV-DSNNYWYGVLGMSIPVRT---MQQFLRNAIDKNLDGEYQLYDSKLRFL 289 V +S P+ D + + GV+G +I + + + L + + S L Sbjct: 162 KRLIVLMSEPIFDKDGIYRGVIGGTIYLHEDNILNTIFGSNPTDELGSSFYIVGSDGHLL 221 Query: 290 TSSNPDHPTGNIFDPRELALLAQAME-HDTRGGIRMDSRYVSWERLDHFDG---VLVRVH 345 +P+ +I + L Q ++ +R + ++ ++ D V+ + Sbjct: 222 FHRDPNRIGEDISANPAVRKLIQGKNGYEQMVNLRGQTVLAAYVKVPENDWGVVVVSPIS 281 Query: 346 TLSEGVRGDFGSISIALTLLWALFTTMLL------------------------------- 374 + E V D S+ + + + L +++ Sbjct: 282 VVQEQVNRDIQSVLLYMLPSFLLLMLVVIVLARKIAKPFVSLANLVSKAGRQEVELSEGS 341 Query: 375 --------ISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTH 426 + IR ++N+ L A D LT L NR L E + Sbjct: 342 QHWNREAELLSRAIRFALTNIKKKTEQLTHDARTDPLTGLTNRRTLEETMQKWMA----E 397 Query: 427 QHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILP 486 Q PFS++ +DLD FKAIND +GHQAGD VL H A +ISSSLR +DV+ R GGEEF V++ Sbjct: 398 QIPFSIMMMDLDRFKAINDTYGHQAGDEVLRHFAKIISSSLRPEDVSCRFGGEEFVVLVS 457 Query: 487 GASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRR 546 L EA +VAERIR L + I + R++ S G++ E L +AD Sbjct: 458 HTGLEEAYQVAERIRRALETRTNPIGQ----RLTVSQGIAHYPSHA-VSPEGLLHVADEA 512 Query: 547 LYLAKQAGRNRVFASDN 563 +Y AK+AGRN+ ++ Sbjct: 513 MYKAKRAGRNQTMIAEE 529 >UniRef50_Q1AX52 Diguanylate cyclase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AX52_RUBXD Length = 378 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 90/387 (23%), Positives = 147/387 (37%), Gaps = 22/387 (5%) Query: 178 SRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQ 237 SR G + + + V ++ + W T++P E Sbjct: 10 SRNGDPAADRRAAPGHDPLEDIKRRV----YLASLVVGLPPIPLLWATARP-----GELF 60 Query: 238 VTVSVPVDSNNYWYGVLGM---SIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNP 294 + V +PV + + + + +P+ +++ + AI + G+ T N Sbjct: 61 LRVGLPVLAAFCLWCMWALWSRRVPLWRLERAVFAAISAFVLGQLAFRIFAG---TGWNM 117 Query: 295 DHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGD 354 D + LA+L + + + G V + D Sbjct: 118 DQASLTETTYPMLAILCIIAQLIFDTQTALRLSLGLFGTATALVGAGALVEESGHRITLD 177 Query: 355 FGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFE 414 + + A ++ + YV ++ L ++ A D LT + NR +L+ Sbjct: 178 QTAWIAQQSAFLAAVIALVYATSYVKSQLARQR-TLAEAMHRLAHTDPLTGISNRRSLYA 236 Query: 415 KARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAG 474 R + + + P SVI DLD FK +ND +GH GD L A ++LRA D G Sbjct: 237 ALRREMEAARRYGKPLSVILFDLDRFKLLNDTYGHNQGDAALRRVAHTARAALRASDHLG 296 Query: 475 RVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDY 534 R GGEEF V+ P L +A +AER+R + + ++AS GV+S D Sbjct: 297 RWGGEEFIVLAPETDLDQARHLAERLREAIA---LDRPPGRP-PLTASFGVASCRP--DD 350 Query: 535 DFEQLQSLADRRLYLAKQAGRNRVFAS 561 E L AD LY AK GRNR + Sbjct: 351 SPEDLLRRADEGLYRAKAGGRNRAETA 377 >UniRef50_Q1NY46 GGDEF n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NY46_9DELT Length = 525 Score = 261 bits (666), Expect = 6e-68, Method: Composition-based stats. Identities = 86/376 (22%), Positives = 148/376 (39%), Gaps = 31/376 (8%) Query: 204 TQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTM 263 + F + R + + + + + + +L R + Sbjct: 164 SASAFRNVFPLLDNGRHLGSVDLSVPFKALRDELAAL----MPGHEFRYILDRDTAERAL 219 Query: 264 QQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIR 323 + L + L + + DS + S P P E+ + + + HD R + Sbjct: 220 RDQLPLYGEAALHPRFLVEDSGVELPDSLPPP--------PAEVVRINRQLRHDRRFQQQ 271 Query: 324 M-DSRYVSWE-RLDHFDGVLVRVHTLSEGVRGDFGSISIA----LTLLWALFTTMLLISW 377 + D +W+ + + + + R IS A L L F LL++W Sbjct: 272 LPDEHSFTWKVMVGNQPWAVNLLRIHDVEQRPVGYLISYAPDNFLVALRKEFIVSLLVAW 331 Query: 378 YVIRRMVSN---MYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQ 434 + + + + + A D LT L NR + ++ + + +P ++ Sbjct: 332 LLAAGLGLLFVLLARSRDEMVRLATTDPLTGLANRRSFMDRLGLEQERFKRFGNPVGLLM 391 Query: 435 VDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAA 494 +D+D FK +ND GH GD VL A L+ +LR D+ GR+GGEEF V+LPGA L Sbjct: 392 LDIDFFKKVNDTHGHHVGDEVLGQFATLMRQNLRHVDLVGRLGGEEFAVVLPGADLEGTL 451 Query: 495 EVAERIRLKLNE--------KEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRR 546 A R+R + E + + I+ S+GV+ + GD E + AD Sbjct: 452 HFANRLRCGVGERLQGEVCGHRFSTSAG-ILNITVSIGVAVLQP-GDDGVEPVLRRADTA 509 Query: 547 LYLAKQAGRNRVFASD 562 LY AK+ GRNR+ + Sbjct: 510 LYRAKENGRNRIEVEE 525 >UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2P1_NITSB Length = 486 Score = 261 bits (666), Expect = 6e-68, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 15/200 (7%) Query: 362 LTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAK 421 L + ++ ++ I R+ + A D LT L+NR E A K Sbjct: 301 LLGSILILFLFTILFYFAISRI---------KFEEMATVDKLTGLFNRHKFQEIAEIEIK 351 Query: 422 LCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEF 481 H+ P SVI D+DHFK IND +GH GD VL A +I ++R D A R GGEEF Sbjct: 352 RSHRHKRPLSVILFDIDHFKKINDTYGHDIGDVVLRELAKIIKQNIRKYDYAIRWGGEEF 411 Query: 482 CVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQS 541 ++ P +A +AE++R + +++ SLGV+S + + +Q Sbjct: 412 LILTPETDEKQAFAMAEKLRKAVESHTFP----EVGKVTISLGVASVDP--NESIDQAIK 465 Query: 542 LADRRLYLAKQAGRNRVFAS 561 AD LY +K GRN+ + Sbjct: 466 KADNALYGSKLGGRNKTTVA 485 >UniRef50_Q04S93 GGDEF domain receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04S93_LEPBJ Length = 330 Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 70/271 (25%), Positives = 116/271 (42%), Gaps = 18/271 (6%) Query: 305 RELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDF--GSISIAL 362 +E +L+ + G + + L +++ S ++ F G+I + Sbjct: 52 KECSLILLDILLPGVTGFEILELIREKKELKDIPVIMITALKESNVLQKAFDSGAIDYVI 111 Query: 363 TLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQ--------------AWHDTLTRLYN 408 A + S + ++ + L+ + D+LT LYN Sbjct: 112 KPFDATELLARVRSALRLFEEMTRRKEREKELEKLTDQLQEVNSYLVAISRTDSLTGLYN 171 Query: 409 RGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL- 467 R +E K C ++I +D+DHFK ND +GHQ GD+ L A I Sbjct: 172 RRYFYEILTTEWKRCWRTGAGIALIMLDIDHFKLYNDTYGHQGGDQCLKQVARAIRDCAR 231 Query: 468 RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIR-ISASLGVS 526 RA DVA R GGEEF VILP + + A V+ I + + + + S T ++ S+G++ Sbjct: 232 RAGDVAARYGGEEFAVILPETNESNAVVVSRNILENVEKMAIPHSASKTNSIVTVSIGMA 291 Query: 527 SSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 + + + +L AD+ LYLAK+ GRN Sbjct: 292 TLSPSPENSITELIERADKALYLAKEEGRNC 322 >UniRef50_Q2W220 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W220_MAGSA Length = 466 Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 93/407 (22%), Positives = 158/407 (38%), Gaps = 41/407 (10%) Query: 179 RAGFYVSTQPTLF-TRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQ 237 RAG + PT ++ T G T F+ + + + W +++ Sbjct: 75 RAGLSLELVPTTDWDESIATSKAGQCTLLSFLNQTPKRD-----EWLLFTEPLFTDSNVF 129 Query: 238 VT------VSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDS------- 284 +T + P + + + +++ N D E D Sbjct: 130 ITREEHPFIIDPAILSGESIALPSGTSMEERIRRDYPNLRVIITDSEKSAIDMVSTRQAS 189 Query: 285 -KLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWER------LDHF 337 LR L + +F+ + + + G +R R Sbjct: 190 MTLRSLIVAAYTIRKEGLFNLKIAGQMPNYSNNLRIGVLRDQPRLRDILNKAIATITPTE 249 Query: 338 DGVLVRVHTLSEGVRGDFGSISIALTL-LWALFTTMLLISWYVIRRMVSNMYVLQSSLQW 396 G ++ H + G +++I + L L A+ + W M L L Sbjct: 250 RGQIINQHVAIQVQTGIDYALTIKIALGLSAVLAVVAYWGW--------RMRKLSRELDR 301 Query: 397 QAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVL 456 + D LT L NR L + + S+I +D+DHFK IND FGH GD+VL Sbjct: 302 LSQTDNLTNLPNRTRLNLQFPIELARARRLGQGLSLIMIDVDHFKRINDEFGHLVGDKVL 361 Query: 457 SHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTT 516 A L+ S+RA D+ R GGEE V+ P + L +A +AERIR + + + + Sbjct: 362 IAMADLVRRSVRAIDLPARWGGEELVVLCPDSHLDQALILAERIRQAVRDHDFDTGRRQ- 420 Query: 517 IRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 + S+GV++ + D +QL + AD+ LY+ K +GR+RV + + Sbjct: 421 ---TVSIGVATLGPSDD--IDQLLNRADQALYIGKSSGRDRVCSEAD 462 >UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASG6_PELPD Length = 505 Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 89/347 (25%), Positives = 141/347 (40%), Gaps = 29/347 (8%) Query: 229 EHASNTEPQVTVSVPVDSNNYWYGVLGM----------SIPVRTMQQFLRNAIDKNLDGE 278 + +T VP+ N GV+ + + + R+ ++ +L G Sbjct: 163 QIQDAGTTLLTHWVPLKVNEGDEGVVVVFHDITERKHYEEALARSEDRFRSVVECSLTGM 222 Query: 279 --YQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDH 336 L LT +NP +I L+ +E + ++ Sbjct: 223 HFISLEADGRLLLTGANP--AADSILGISHWPLVGSDVEEAFP---ELKDHFLLDLYRRV 277 Query: 337 FDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQW 396 G L +L R + + L + T+ + ++ +Q L+ Sbjct: 278 AAGEL-GPQSLEHERRLESKTKHYDLRVFRTGPGTISVEFA-----DITERTRMQEELRE 331 Query: 397 QAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVL 456 + D LT LYNR L++ + H HP +++ +D+DHFK IND FGH +GD VL Sbjct: 332 ASERDPLTSLYNRRKLYQLLTVELTRTRRHGHPLTLMLLDIDHFKRINDTFGHDSGDLVL 391 Query: 457 SHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTT 516 + A LIS+ LR+ D+ R GGEEF + P + AA +AE+IR + Sbjct: 392 TQVAELISAILRSTDILARYGGEEFVIACPETDMDGAAVLAEKIRSSIAMFSFPTVG--- 448 Query: 517 IRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 ++ S+G+S E D L AD LY AK+ GRNRV S Sbjct: 449 -AVTISVGISLLES--KDDINALIKRADTALYAAKEMGRNRVVRSTE 492 >UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clostridium thermocellum RepID=A3DEY5_CLOTH Length = 550 Score = 260 bits (665), Expect = 8e-68, Method: Composition-based stats. Identities = 80/308 (25%), Positives = 129/308 (41%), Gaps = 12/308 (3%) Query: 263 MQQFLRNAIDKNLD------GEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEH 316 +++ L++ D + LYD L + + Q + Sbjct: 243 VRELLKSVNDIIIGVMGVSSSTIILYDENKGRLKVHTTNITNRKELIILNDNINCQKLLD 302 Query: 317 DTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGV--RGDFGSISIALTLLWALFTTMLL 374 + G + +V E +G + + FG + I A L Sbjct: 303 ALQKGEPILENFVDMEEYPFVEGRGIHSLLCVPLITKAKKFGLVLIEHKYFNAFDDNNLR 362 Query: 375 ISWYVIRR--MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSV 432 + + ++ + L + A D+LT +YNR E+ R + + S+ Sbjct: 363 LLNIIGQQVGIAMENVELYQRMHEMATIDSLTGIYNRLYFQERLREEFANAKKENYDLSL 422 Query: 433 IQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTE 492 +D+DHFK ND FGH GD+VL H A L+ SLR+ D+ R GGEEF ++LP S+ E Sbjct: 423 AIMDIDHFKRFNDTFGHLFGDKVLKHIAHLMKKSLRSGDIIARYGGEEFVILLPRTSVKE 482 Query: 493 AAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQ 552 A + ER+R + + + + ++ S GVSS E + + E L AD LY AK+ Sbjct: 483 AYDKVERLRNIVAKTTIK-DELVEASVTVSFGVSSYPEFANTESE-LLKTADNALYDAKE 540 Query: 553 AGRNRVFA 560 +GRN V Sbjct: 541 SGRNCVRI 548 >UniRef50_Q4UQ33 Response regulator n=3 Tax=Xanthomonas campestris pv. campestris RepID=Q4UQ33_XANC8 Length = 349 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 85/344 (24%), Positives = 135/344 (39%), Gaps = 21/344 (6%) Query: 231 ASNTEPQVTVSVPVD-SNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFL 289 S E + VS ++ + + GV +++ V+ +F + + G L D + Sbjct: 5 RSTGELVIPVSRRINNKDGNFGGVFLVTLRVQYFSRFYAD-FRMDEQGVIVLADQNGTIM 63 Query: 290 TSSNPD-------HPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLV 342 D G+IF A H R +ERL+ + ++V Sbjct: 64 VRHPFDTNMIGRNIAKGDIFSK--YLPHASRGVHMVVAITDKVERMYGYERLNRY-PLVV 120 Query: 343 RVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSL-------Q 395 + G + ++ L + ++ +I R + ++ L + Sbjct: 121 LAGKSKRAILGSWYESLYGSLIMLCLILPIPVLFATLISRQIKTTLKVEDELRLAYAAVE 180 Query: 396 WQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRV 455 A D+LT L NR L K + P VI VD+D+FK ND +GH AGD Sbjct: 181 AIAMQDSLTGLANRRQLDVVLPAEIKRAKRTSQPLGVIMVDIDYFKRYNDYYGHPAGDLC 240 Query: 456 LSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKS 514 + A ++ + RA ++A R GGEE V+LP AERI + ++ S Sbjct: 241 IKAIANVLKNHTRRAGNLAARYGGEELTVLLPSCDQAAVLAAAERIVESIRGLQIAHDDS 300 Query: 515 TTIRISASLGVSSSEE-TGDYDFEQLQSLADRRLYLAKQAGRNR 557 ++ S+G S + D L AD LY AKQAGRNR Sbjct: 301 PEGYLTVSVGAYSYSAFNKEVDASGLLKCADDALYAAKQAGRNR 344 >UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C0K6_ACAM1 Length = 449 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 73/180 (40%), Positives = 103/180 (57%), Gaps = 1/180 (0%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 M + + Q L A D LT +YNR + Q +HP S+I VD+DHFK Sbjct: 251 MANQLEQSQQDLYRLATLDGLTEVYNRREFNRWLLVEIERSQRGEHPVSLIMVDIDHFKR 310 Query: 443 INDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRL 502 +ND +GHQAGD L A L+ +R D+ R GGEEF VILP A+ ++ +AERIRL Sbjct: 311 LNDTYGHQAGDLALCEVAQLLQREVRPGDIVCRYGGEEFGVILPKATSADSWVIAERIRL 370 Query: 503 KLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 + EK +++ I ++ASLGV++ + D E+L AD+ LY AK GRNRV +++ Sbjct: 371 AIAEKSVVLPSQQHIDMTASLGVATYPDHADCK-ERLVKQADQALYTAKYQGRNRVHSAE 429 >UniRef50_A0YS99 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with Phytochrome (GAF) sensor n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YS99_9CYAN Length = 628 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 8/231 (3%) Query: 335 DHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSL 394 ++ ++ L++ R + + + L + + Y + + L Sbjct: 404 ENKLWGMLIACQLTQSRRWEKWEVHLLEQLTTPIAVAIQQAELY------EQLKIANQEL 457 Query: 395 QWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDR 454 + A D LT + NR + + S+I D+D+FK ND +GH AGD Sbjct: 458 EKMAMTDGLTLVANRRFFDKILSQEWNRLRREIGTLSLIICDIDYFKRYNDTYGHLAGDS 517 Query: 455 VLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 L A ++ + R+ D+ R GGEEF ++LP L A V+E I K+ ++ K Sbjct: 518 CLKKVAQVLQEEVKRSGDLVARYGGEEFAILLPKTDLEGAILVSEVICSKVRALQITHEK 577 Query: 514 STTIR-ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 S ++ S+GV+S+ + L AD+ LY AK+ GRNRVF + N Sbjct: 578 SLVAPYVTISVGVASTIPEPPLIPKTLILRADQALYEAKKNGRNRVFVAAN 628 >UniRef50_Q1JWB7 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWB7_DESAC Length = 513 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 67/182 (36%), Positives = 98/182 (53%), Gaps = 2/182 (1%) Query: 381 RRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHF 440 M+ + L LQ + D+LTR+ NR E + + + + S++ +D+DHF Sbjct: 332 NHMLDRIESLNKELQLASMTDSLTRVGNRRQFDEHLQHEWLIARRNGTVVSLLMIDIDHF 391 Query: 441 KAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 K ND +GHQ GD+ L A +IS+ + R D+ R GGEEF VILP L A +VAER Sbjct: 392 KLYNDTYGHQDGDQCLQSVAEVISNQVKREADLVARYGGEEFAVILPDVPLIGAQKVAER 451 Query: 500 IRLKLNEKEMLIAKS-TTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 IR +N+ + + T I+ S+G S D E+L AD+ LY AK+AGRN + Sbjct: 452 IRQAINDLGIPNVDALKTPWITVSIGYESMSPQSGQDCEELIRFADQALYRAKKAGRNCI 511 Query: 559 FA 560 + Sbjct: 512 IS 513 >UniRef50_C6N492 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N492_9GAMM Length = 509 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 97/517 (18%), Positives = 172/517 (33%), Gaps = 47/517 (9%) Query: 71 LQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVS 130 LQ +++L + + + ++ V + ++ K L N Sbjct: 14 LQAEIERLNKIIKALIDRAEQDMNSPRTDFGVFQNTIILEDQVQKRTQELEEALQTNTKI 73 Query: 131 DALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTL 190 + + +E +IT+AL G L+ +V+ A + + Sbjct: 74 TRALQQAKKQVELSEHYLRDITSALGEGLLVV------DKDAVIEFVNAAACNILGYSEI 127 Query: 191 --FTRNVPTRYYGY--VTQPWFIGHSQRENR--HRAVRWFTSQPEHASNTE--PQVTVSV 242 +N ++ P+ I + + + P ++ Sbjct: 128 EMLGKNSHELFHHSHPDHTPYPIEECKNLSVIQTEQPYVSDEDYFWRKDGTCFPVSLITT 187 Query: 243 PVDSNNYWYGVLGM------SIPVRTMQQFLRNAIDK--------NLDGEYQLYDSKLRF 288 P+ G++ S+ RT + ++ AI++ + + ++ Sbjct: 188 PIRLKENTKGIVIAFHDITQSVEERTRLREMQAAIEQSPVSVLIVDKQKNILYVNPQITK 247 Query: 289 LTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLS 348 T G D + D I+ S + DG + Sbjct: 248 STGYTRKELYGQKTDIFRGDQTPNNVLPDLWKIIKSGSTWKGELLYQRKDGSVFWQSWNI 307 Query: 349 EGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYN 408 V + G I + + ++ LQS LQ ++ D LT + N Sbjct: 308 APVLDNHGEIQ----------------HFAAVGEDITEKMKLQSLLQEMSYMDGLTGIAN 351 Query: 409 RGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSS-L 467 R + + P ++I +D+D FK ND GH AGD L + S L Sbjct: 352 RRRFDDFLTHEWYRAARYAKPLAIIMMDIDFFKRYNDSLGHLAGDDALKRVVHALKSRVL 411 Query: 468 RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIR-ISASLGVS 526 R D+ R GGEEF ILP ++ +A AE +R + ++ S ++ S+GV+ Sbjct: 412 RRTDLLARYGGEEFICILPDTNVIDATLFAETLRQAVCALQLPHPDSNISSFVTISVGVA 471 Query: 527 SSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 L LAD LY AK GRNRV D+ Sbjct: 472 CCTPREGE-PSNLLGLADEALYRAKTLGRNRVEVIDS 507 >UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms RepID=A0L4D8_MAGSM Length = 464 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 128/264 (48%), Gaps = 15/264 (5%) Query: 305 RELALLAQAMEHDTRGGI----RMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI 360 E+A + M D G SR + RL + + + T +E +R S++ Sbjct: 199 AEIADRMRVMRKDASGATGRLDETLSRIRTTTRLGDLESLRGALVTEAEALRSQTQSLAT 258 Query: 361 ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA 420 +L+ A ++ ++++ ++ + + D LT++ NR ALF+ Sbjct: 259 SLSESQAQLD----LTRKQLQQVQDDLKKAKEE----SLTDPLTQVANRRALFQSLTRET 310 Query: 421 KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE 480 + + P S+I +DLDHFK IND +GH GDRVL AG + LR D R GGEE Sbjct: 311 ARTRRYGEPLSLIIIDLDHFKKINDTYGHPVGDRVLKEVAGHARALLRDSDTLARYGGEE 370 Query: 481 FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDF--EQ 538 F +LP +L +A E AE+IRL + + K ++ ISASLGV+ ++ D E Sbjct: 371 FVALLPETTLPQAMEKAEQIRLSVAAMRFKL-KGESLSISASLGVAQLDDGASQDANNEA 429 Query: 539 LQSLADRRLYLAKQAGRNRVFASD 562 AD+ LY AK GRN V +D Sbjct: 430 FVHRADQALYRAKSGGRNCVIQAD 453 >UniRef50_Q2W1M0 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W1M0_MAGSA Length = 477 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 81/308 (26%), Positives = 124/308 (40%), Gaps = 19/308 (6%) Query: 259 PVRTMQQFLRNAID-----KNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQA 313 R + L + + DG +LY+ R + F Q Sbjct: 183 EARRFAESLVELLPNPLWFTDPDGSLRLYNRAFREM------------FGVDSGDWHGQP 230 Query: 314 MEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTML 373 + + G L +L ++ L T Sbjct: 231 THGVLPQPLAGLDQMADMSLKVGGPGGLAFEASLDHQDGQRTLVVNKGLVRSDCRGTADE 290 Query: 374 LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 + I ++ ++S L+ A D LT NR A F A + + + SV+ Sbjct: 291 PMGTIGIVTDITERKHMESQLRHLATTDELTGCLNRRAFFVAAEQELERASRYGNAVSVL 350 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEA 493 +D+DHFK +NDR GH GD+ L A I ++LR D GR+GGEEF +LP +L A Sbjct: 351 MIDIDHFKQVNDRHGHAVGDKALKAATAAIRANLREIDSFGRLGGEEFAAMLPETTLAGA 410 Query: 494 AEVAERIRLKLNEKEMLIAKST-TIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQ 552 VAER+R + + + +R++ SLGV+ + G+ +Q+ + AD LY AK Sbjct: 411 LLVAERLRQAVEAIALPLGDDQPPLRLTTSLGVAERQP-GEVAVDQVLARADTALYRAKA 469 Query: 553 AGRNRVFA 560 GRNRV A Sbjct: 470 EGRNRVLA 477 >UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY29_9AQUI Length = 336 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 95/329 (28%), Positives = 155/329 (47%), Gaps = 20/329 (6%) Query: 240 VSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTG 299 V+ + W G+L M + A + G+Y + T ++ Sbjct: 17 VANREYEKDNWKGILDMVAELFEADG----AAIGEVRGDYL-------YYTKASSTIADS 65 Query: 300 NIFDPRELALLA--QAMEHDTRGGIRMDSRYVSWER-LDHFDGVLVRVHTLS-EGVRGDF 355 IF+P E + A E + G + Y +ER ++ + + +R ++ G + F Sbjct: 66 GIFNPEEFRVPVWWSAFEEASDRGYILIEDYQRYERAVESWKKIGLRSKLVAILGDKEPF 125 Query: 356 GSISIALTLLWALFT---TMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGAL 412 GS+S+ + FT +L S I + + + L +A D LT LYNR L Sbjct: 126 GSLSVGRVMSSKPFTEEDGKILRSLAFIFSFIVKEELEKKRLLEKAIIDHLTGLYNRFYL 185 Query: 413 FEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDV 472 E + + P S+I DLD+FK +ND +GHQ GDRVL A ++SS++R+ D+ Sbjct: 186 EEAGAREIARAKRYGFPISLIMFDLDNFKQVNDTYGHQVGDRVLVKFASIVSSNVRSTDM 245 Query: 473 AGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETG 532 R GGEEF V+LP EA +VAERIR + + + +R++ S G+ S +G Sbjct: 246 PVRYGGEEFVVLLPHTYPEEAVKVAERIREEFEKFLFRF-EGEVMRLTVSAGI-SFCNSG 303 Query: 533 DYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + +L +AD+ +Y AK+ G+NR+ Sbjct: 304 ECSLGELIQMADKAMYEAKEKGKNRIEVF 332 >UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longbeachae D-4968 RepID=D1RD98_LEGLO Length = 721 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 73/351 (20%), Positives = 132/351 (37%), Gaps = 22/351 (6%) Query: 224 FTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYD 283 + + + Q+T+ V+ ++ + Q+ L N + K Sbjct: 361 LHAGMQALQDKNEQITL--LVEMSDIMLAC--------SSQKELSNVMSKYCQRILHFAR 410 Query: 284 SKLRFLTSSN---PDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHF--- 337 L + S T + +E G + + + +H Sbjct: 411 GYLYIMHPSKNYLEMATTWGTPNTQEATFTPNDCWAIRLGKMHQVNHSHNELICNHVNVS 470 Query: 338 -DGVLVRVHTLSEGVRGDFGSISIAL----TLLWALFTTMLLISWYVIRRMVSNMYVLQS 392 + L + +G + + + ++ +L+ ++ + + L+ Sbjct: 471 SEQALSYLCIPLMAQNDIYGLLYMEVSEEPAGAFSQNQQLLITAFSELTALAFANVRLRE 530 Query: 393 SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAG 452 +L++Q+ D LT LYNR L + + + P S++ +DLDHFK IND +GH AG Sbjct: 531 NLRYQSMRDPLTGLYNRRYLEDFLLKQIHQSERTKSPISLLMLDLDHFKKINDTYGHDAG 590 Query: 453 DRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA 512 D L ++ +R D+A R GGEEF V AE IR ++ ++ Sbjct: 591 DVALKELGKILQEDIRVGDIAARYGGEEFIVAFYNTDEKTIKTRAESIREAVSRLQVKYG 650 Query: 513 KSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 I+ S+GV+ G +L AD+ LY AK G+NR+ Sbjct: 651 AQPVGPITVSIGVAVYPTDGRNT-NELIESADKALYFAKTNGKNRIVLYSE 700 >UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X007_DESRD Length = 531 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 104/193 (53%), Gaps = 2/193 (1%) Query: 370 TTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHP 429 L V+ R VS +S L A D LT LYNR FE AR + + P Sbjct: 329 ARGRLWGQLVLMRDVSERKEAESRLLQMAATDELTGLYNRRRFFELARGEFNRAKRYSSP 388 Query: 430 FSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGAS 489 +++ +D+D+FK IND +GH AGD L +I+S LR+ DV R+GGEEF +LP Sbjct: 389 MTILLLDIDYFKRINDEYGHDAGDTALRCIVSMIASQLRSLDVLARLGGEEFVALLPETH 448 Query: 490 LTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYL 549 +A +AERIR ++ + + + TT+ ++ S+GV+ + D +L + AD +Y Sbjct: 449 QFDAERIAERIRSEIESTAINLFE-TTLFVTVSIGVAGYSK-EMQDVGELINRADEAMYR 506 Query: 550 AKQAGRNRVFASD 562 AK+ GRN+V + Sbjct: 507 AKRDGRNQVCLAT 519 >UniRef50_B1WQB8 Putative diguanylate cyclase n=2 Tax=Cyanothece RepID=B1WQB8_CYAA5 Length = 493 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 2/182 (1%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 + + + L+ D LT+++NR E + + + S+I D+D+ Sbjct: 306 VEQRTIELQQALKKLKALVNLDGLTQIFNRRYFDEVLYREWQRGRREKSVISLILCDVDY 365 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAE 498 FK N+ +GH GD L A I + R D+ R GGEEF ++LP L A +AE Sbjct: 366 FKIYNETYGHLGGDSCLQEVAQGIRRQVKRPSDLVARYGGEEFVILLPNTDLNGALALAE 425 Query: 499 RIRLKLNEKEMLIAKS-TTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 IR + + S + ++ S+GV+S ++E L AD LY AK+ GRN Sbjct: 426 MIRNAIEAMNIPHENSLVSDHVTISMGVTSKIPQETDEYEHLIEEADDALYQAKENGRNC 485 Query: 558 VF 559 V Sbjct: 486 VC 487 >UniRef50_Q30SV7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SV7_SULDN Length = 659 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 60/184 (32%), Positives = 89/184 (48%), Gaps = 6/184 (3%) Query: 377 WYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVD 436 I R +S + + +L+ A D LT +YNR E + + + S+I +D Sbjct: 481 IISIARDISELKAMNKTLEKMANTDNLTGIYNRRKFEEIIKIEMERSARYNSNLSLIMID 540 Query: 437 LDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEV 496 +DHFK IND +GH GD V+ ++S ++R DV R GGEEF V+ P A+ + Sbjct: 541 IDHFKRINDTYGHDEGDNVIRKTVEIVSKNIRHLDVFVRWGGEEFIVLCPQTESKNASIL 600 Query: 497 AERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRN 556 AE++R+ + +I+ S GV+S + D D LY AK GRN Sbjct: 601 AEKLRVAIESVNYETLG----KITCSFGVTSYIKDEDKS--SFIKRLDTALYSAKDEGRN 654 Query: 557 RVFA 560 RV A Sbjct: 655 RVVA 658 >UniRef50_B6BHU8 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BHU8_9PROT Length = 588 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 8/184 (4%) Query: 377 WYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVD 436 + ++ ++ + L+ + D LT + NR +K + +QHP S+I D Sbjct: 412 YSIVLTDITEQENYKKELEHLSVTDALTGIGNRRYFHQKIEEEIHRAKRYQHPLSLIMFD 471 Query: 437 LDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEV 496 +D FK +ND+ GH GD VL LI+S LR DV R+GGEEF +ILP A EA ++ Sbjct: 472 IDFFKHVNDKHGHSVGDEVLIEYTKLINSLLREGDVFCRIGGEEFIIILPHALRDEAQKI 531 Query: 497 AERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRN 556 AE++R K+ I I+ S GV + E + D LY AK++GRN Sbjct: 532 AEKLRAKIE------FCQKVIPITMSFGVVEYIVGEE--IEFIFKRVDDALYKAKESGRN 583 Query: 557 RVFA 560 V Sbjct: 584 IVVV 587 >UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DIJ3_DESVM Length = 1000 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 76/287 (26%), Positives = 116/287 (40%), Gaps = 12/287 (4%) Query: 275 LDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERL 334 L+D + +FL N + REL + ++ R Sbjct: 702 AADAIFLHDPEGKFLDV-NEVACRRLGYTRRELLAMTPRELDAEEFAEQVGERIRRLREE 760 Query: 335 DHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSL 394 E + + + L I R +++ L+ +L Sbjct: 761 GSLTF---------ESAHRTRNGTVLPVEIHAKLLDFDGKPVVLSIARDITDRKRLEQAL 811 Query: 395 QWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDR 454 +A D LT + NR F A + P +V+ +DLD FK +NDRFGH AGD Sbjct: 812 MREATTDPLTGIRNRRQFFVDAEREMGRAVRYGRPLAVLMLDLDRFKRVNDRFGHHAGDA 871 Query: 455 VLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKS 514 VL +LR D+ GR+GGEEF +L L +A AER+R + E ++ Sbjct: 872 VLMGCVQACQQALRETDILGRLGGEEFAAVLLETDLDDALAAAERLRRAVEEMDVPF-SG 930 Query: 515 TTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 +R + S+G++ GD + + AD LY AK+AGRNRV + Sbjct: 931 QRLRCTVSIGLA-LRGPGDGALDDILRRADSALYAAKEAGRNRVMLA 976 >UniRef50_B4VMP7 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VMP7_9CYAN Length = 505 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 93/197 (47%), Gaps = 2/197 (1%) Query: 366 WALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQT 425 + L + ++ + ++ L++ D LT + NR + + Sbjct: 295 FIQLIAAQLGTLMQRIKVETALFEANQKLKYLVTIDGLTGIANRRKFDQYIHREWQRLFR 354 Query: 426 HQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVI 484 Q P S+I D+D FK ND +GHQAGD L + A I + R D+ R GGEEF VI Sbjct: 355 EQLPLSLILGDIDFFKRYNDTYGHQAGDDCLRNVATKIRLLVKRPADLVARYGGEEFAVI 414 Query: 485 LPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIR-ISASLGVSSSEETGDYDFEQLQSLA 543 LP + A VAE IR + ++ S + + ++ SLGVSS + E L + A Sbjct: 415 LPNTNAKGAIHVAETIRQGVETLKIPHGGSESSKYVTLSLGVSSLIPNSLVNVEGLINQA 474 Query: 544 DRRLYLAKQAGRNRVFA 560 D+ LY AK GRN+ A Sbjct: 475 DQALYRAKAGGRNQTVA 491 >UniRef50_Q216C5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Rhodopseudomonas palustris RepID=Q216C5_RHOPB Length = 735 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 95/379 (25%), Positives = 139/379 (36%), Gaps = 35/379 (9%) Query: 201 GYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQ-VTVSVPV-DSNNYWYGVLGMSI 258 P+F +S E + + T S P+ D + GV + Sbjct: 362 NESAAPYFQSAIAG--------LASSHVEFDPVSGMRSYTSSTPIRDRDGSVVGVAMLKK 413 Query: 259 PVRTMQQFLR----NAIDKNLDGEYQLYDSK---LRFLTSSNPDHPTGNIFDPRELALLA 311 + ++ L N DG L + R L D P +++ Sbjct: 414 SLDRLEASLLSFDGEFYFVNDDGVVMLSNRAEMLGRALWPRAVDELRLAKPSPAAKTMMS 473 Query: 312 QAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTT 371 +A+ YV D L+ V V G F + + + + Sbjct: 474 RAIVDSVWTTADGVPAYVLRHTADEGGWSLLMVFP----VTGIFPTRFLGIVITLQFSIM 529 Query: 372 MLLISW---YVIRRMVS-----NMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLC 423 L + + IR + + L LQ QA D LT ++NR E Sbjct: 530 ALFYFYGREHGIRDSIHTEKRIELQELARGLQVQATTDPLTGMFNRRVFNEGLAAELVRF 589 Query: 424 QTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCV 483 Q PFS + D+DHFK IND GH GD+VL H + ++S S+R D R GGEEF + Sbjct: 590 NRQQTPFSSLLCDIDHFKEINDVHGHLMGDQVLVHLSRILSRSVRQTDFLARWGGEEFGI 649 Query: 484 ILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLA 543 +L GA T A E AE++R + ++ S GV+ E L + Sbjct: 650 LLVGADQTAAVEFAEKLRTTIAYTVF----DDVGNLTCSFGVAECVLG--DTPESLLARV 703 Query: 544 DRRLYLAKQAGRNRVFASD 562 D LY AK GRNRV + Sbjct: 704 DNALYRAKMNGRNRVELAP 722 >UniRef50_Q2BLA2 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLA2_9GAMM Length = 811 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 88/425 (20%), Positives = 155/425 (36%), Gaps = 31/425 (7%) Query: 163 LAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVR 222 L + + ++ Y R + + + +++ Y + + + + Sbjct: 379 LGYEETDILHSLWYSPRYISEMEDRYQSYLKSIERGYLS-KDLEYTENAVLDSDGNHLII 437 Query: 223 WFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLR-------------- 268 + ++ + + +S D Y I MQ L Sbjct: 438 AWHNKLQFDDDGNLTGMLSAGEDITQKHYFSTLDRIRSEAMQSALEGSSLNKILDKVLKG 497 Query: 269 -NAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAM-------EHDTRG 320 ++ L D + L + + + H R Sbjct: 498 IERLNPGSQCSILLLDDSGQHLMGCAAPSLPEAYNQAIDGVQIGDGVGSCGTAAFHQKRV 557 Query: 321 GIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVI 380 + + W V SE + G G + + + + Y+I Sbjct: 558 IVEDIQTHPYWAAFKELAAVHSLGSCWSEPIFGKKGRLLGTFAIYHENACSPIDRDLYLI 617 Query: 381 RR------MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQ 434 R ++ +++L A D LT L NR + + S+ Sbjct: 618 TRTADFVSLLIEEQQTEANLHRLATTDELTSLANRRKFLTTLEAELARAKRYHRELSLCM 677 Query: 435 VDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAA 494 +DLDHFK IND GH AGD VL A ++ + LR D+AGR+GGEEF ++LP S +A Sbjct: 678 LDLDHFKRINDDNGHSAGDSVLVEVAKIMEAMLRESDMAGRIGGEEFAILLPDTSEDDAL 737 Query: 495 EVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDY-DFEQLQSLADRRLYLAKQA 553 +AER+R + E+ ++ T++++ S+GV+S + + +L S AD +Y AKQ Sbjct: 738 ILAERLREAIESLEIKY-QAHTLKLTTSIGVASLNQMPEIVQASELLSAADDCMYYAKQN 796 Query: 554 GRNRV 558 GRN V Sbjct: 797 GRNLV 801 >UniRef50_B8DNJ7 Diguanylate cyclase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DNJ7_DESVM Length = 569 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 105/506 (20%), Positives = 181/506 (35%), Gaps = 44/506 (8%) Query: 88 ALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESL 147 A+ A D + A Q +++ R LP D + + E Sbjct: 49 AVRALDDMVANAKARLALRQRTVNDEFELAFAGLRRLPDLLAQDDRIRDEAAPRPEAAPR 108 Query: 148 DNEITAALEVGYLLRL--AHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQ 205 + + + + A + +G ++T ++ Y + Sbjct: 109 KQQQADVRRRAPVNTFLKTFAETMDLHIAWLMDHSGTCIATSNYDSADSL--LGTNYSDR 166 Query: 206 PWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGM--SIPVRTM 263 +FI E R ++ + + P + PV GV+ + +P + Sbjct: 167 AYFIAAMSGE---RGRQFAVGRVS----SVPGFFFASPVRQYGTVLGVVAVKTDLPTLSR 219 Query: 264 QQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPREL-------------ALL 310 + L A + G L + K + R L + Sbjct: 220 RLRLDAAFITDEQGVVVLANDKTHIFHALPDAPVRDMPISARILRYKREAFPELSLRPFV 279 Query: 311 AQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSE-----------GVRGDFGSIS 359 + ++ + D+ + + H + +H E VR F + Sbjct: 280 VRGIDEKHGLTLIGDATRPALLGVIHRPQDGLSLHVAEEVGEALSLEDRRQVRFHFAVLC 339 Query: 360 IALTLLWALFTTMLLISWYVIRRMVS----NMYVLQSSLQWQAWHDTLTRLYNRGALFEK 415 L L + + + R++ + L L+ A D LT +NR L E Sbjct: 340 GLAVLGTLLSAVIYTLHNHSQLRIIEGNNQALTRLNEELRRIAERDHLTGCFNRRRLDEA 399 Query: 416 ARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGR 475 HP ++ +DLDHFKA+ND+ GH GD +L+H +I + LR D+ R Sbjct: 400 MNAELARSARSGHPLALAMLDLDHFKAVNDQHGHGVGDAMLAHVTEIIRNQLREPDLLAR 459 Query: 476 VGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYD 535 VGGEEF ++LP EA + ER+R K+ E + A I ++ S GV+ S D + Sbjct: 460 VGGEEFALLLPDTGEREAVTLLERVRRKVQETPLPHADG-PIPMTVSAGVAESRP--DIE 516 Query: 536 FEQLQSLADRRLYLAKQAGRNRVFAS 561 + +AD LY+AK+ GRNR + Sbjct: 517 PGRWMHVADAALYMAKRCGRNRTVRA 542 >UniRef50_A0YTC6 Sensory transduction histidine kinase n=2 Tax=Oscillatoriales RepID=A0YTC6_9CYAN Length = 738 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 79/306 (25%), Positives = 128/306 (41%), Gaps = 15/306 (4%) Query: 258 IPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHD 317 + V T+ + L+ + NL G L + + P F+ L A+ +D Sbjct: 443 VEVTTLDEGLQQVENGNLFGYIDLLPTTSYAIQKRYPSLKIAGRFEQP--WELGIAVRND 500 Query: 318 TRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISW 377 + + + ++ G++ ++ D+ + L + + +L + Sbjct: 501 QPELLSIFEKAIASIDEKAKQGIINDWISVRYEQGVDYRIVRRFLFIGLTVLAIVLYRQY 560 Query: 378 YVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDL 437 + L+ + D LT +NR + E + L +Q FSVI D+ Sbjct: 561 L--------LQTYNRKLEKISVTDPLTGCFNRLKIEECLQKQESLFNRYQQTFSVILCDI 612 Query: 438 DHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVA 497 D+FK IND FGH AGD VL L++ LR D+ GR GGEEF ++ P L+ A +A Sbjct: 613 DYFKKINDTFGHLAGDAVLMEMVTLLNQRLRDTDILGRWGGEEFMIVAPNTDLSGATTLA 672 Query: 498 ERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 557 E + +L + E + +AS GV+ G + L S D LY AK+ GRN Sbjct: 673 EALCQQLADHEFITVGHQ----TASFGVAEF-HRGSHSISHLISQVDEALYKAKKKGRNC 727 Query: 558 VFASDN 563 V A Sbjct: 728 VVAYQE 733 >UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A0S0_DESOH Length = 374 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 77/346 (22%), Positives = 137/346 (39%), Gaps = 42/346 (12%) Query: 235 EPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNL-----------------DG 277 T+S + + + V+G+ + Q+ +D L G Sbjct: 44 NVSRTLSTSLHVADLFEVVMGLIGEALNVDQYCLMFLDDELQKLQIRASHGIPETVVMHG 103 Query: 278 EYQLYDS-KLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDH 336 E ++ R ++ +P + ++ + G+ + ++ Sbjct: 104 EIKVTAGVSGRVVSGGHPVLIDDISKESDFFYFPGSGIKQGSYLGVPLKNQ--------- 154 Query: 337 FDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQW 396 +GV++ V + + F + L A + + + + + Sbjct: 155 -EGVIIGVLNAHKPMVNGFSKNDLRLFAAVAENVAIAVSNAMTL-----------QQTRE 202 Query: 397 QAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVL 456 D LT LYNR FE+ + + S++ +D+DHFK ND +GH GDRVL Sbjct: 203 LIRKDELTGLYNRRYFFERFEREVYRSRRYGRTISLMMIDIDHFKEYNDSYGHLRGDRVL 262 Query: 457 SHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTT 516 + + SSLR DV R GGEEF V+LP S A VAE++R + + + Sbjct: 263 KTISRIFESSLRKIDVVARYGGEEFLVLLPETSRENAIRVAEKLRQAVEKVDFNEDAPNL 322 Query: 517 IR--ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 ++ ++GVS+ + + L LAD+ LY+ K GRN+V + Sbjct: 323 GPCALTITIGVSAIPDDANEPILAL-DLADKALYMGKAQGRNQVCS 367 >UniRef50_A8IL01 Putative diguanylate cyclase n=2 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IL01_AZOC5 Length = 549 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 99/481 (20%), Positives = 181/481 (37%), Gaps = 28/481 (5%) Query: 89 LVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLD 148 + A L +D T Q ++ + R L + +S E E +LD Sbjct: 68 VQAVLLLEIRQDRWTSAIQAAQNVLHTLDSDVDRNLNLLDLSLQGAQEATTRV-EIANLD 126 Query: 149 NEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWF 208 I + S+ + + +S +G V V R + + +F Sbjct: 127 PVIRNLVLFDRA-----GSAEYLGAMLVLSPSGEIV-----YDASEVKPRSGNFADRDYF 176 Query: 209 IGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFL 267 ++ + + P + +S + + + + GV+ +I + + L Sbjct: 177 QVQ---KDSAQEPYISAPFVGRLGDDNPGIALSRRISNPDGSFDGVVMGAISLNYFRD-L 232 Query: 268 RNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRG------G 321 + I+ GE L S R + + + L + + G G Sbjct: 233 FSRINMGRAGEIALVRSDGRLVMRWPSGDTHDLLNASISRSGLFRHIAEGPSGSFTTSDG 292 Query: 322 IRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIR 381 R+ + + F LV V + V G + ++ L+ + +++ ++ Sbjct: 293 TDGVERHYLYAPVGRFPLTLV-VGFSVDEVLGLWRRQALTFGLIGCVIAGAIVLLVLALQ 351 Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 + + + + A D LT L NR + E+ A+ P +++ +D+D FK Sbjct: 352 GALRREEKMSARFENLATTDWLTGLPNRRSFDERLIAAARSTARSAAPLALLMIDVDRFK 411 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERI 500 +NDRFGH GD VL + ++ + R D+ R GGEEF +LPG AA VAE + Sbjct: 412 VLNDRFGHGRGDEVLRQISQVLKACARRPDDMVARYGGEEFAAVLPGTDAAGAARVAEAM 471 Query: 501 RLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 R + + ++ S+G +S + + L + AD LY AK GRNRV Sbjct: 472 RAAVE-HAFPSPD---MTVTVSIGAASGTLAPETETRTLLAAADAALYEAKAQGRNRVVL 527 Query: 561 S 561 + Sbjct: 528 A 528 >UniRef50_C1TNZ5 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TNZ5_9BACT Length = 481 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 85/402 (21%), Positives = 160/402 (39%), Gaps = 31/402 (7%) Query: 173 QAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQP---WFIGHSQRENRHRAVRWFTSQPE 229 Q + + F+VS + ++ WF + N + Sbjct: 98 QIKFDAITAFFVSNKTEIYYHADGILKRVSPDAERDVWFYRVKKMGNP----YEINVDID 153 Query: 230 HASNTEPQVTVSVPV-DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRF 288 A++ + ++ V D + + G G+ + V + + + + D E D + Sbjct: 154 MANDDTMTIFINYKVFDYDGNFIGATGIGLTVNAVTKLIAQ-YRERYDREIYFTDGEGTI 212 Query: 289 LTSSNPDHPTGN--IFDPRELALLAQAMEH-------DTRGGIRMDSRYVSWERLDHFDG 339 ++ D G +FD E +A+ + + + ++ + FD Sbjct: 213 TLRASDDGTDGRKTLFDRLERNEMAREILSRREDVPISRTFDRKGHTIHLDSRYIPEFDW 272 Query: 340 VLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAW 399 L + + +++I + + + + + ++R + ++ A Sbjct: 273 YLFVEQNEDDVTKAIRHTLAINILVGGLITLVVTSLVALIVR-------NYERRVERLAS 325 Query: 400 HDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHA 459 D LT ++NR A L + + SV +D+DHFK +ND +GH GDRVL H Sbjct: 326 VDELTGMWNRRAFDLAFAHLLEKFE---GQCSVTMMDIDHFKHVNDTYGHLMGDRVLGHV 382 Query: 460 AGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRI 519 +++ ++ DV GR GGEEF V+L G +A + AE+IR + + I Sbjct: 383 CDVVTKAIGPDDVCGRWGGEEFIVLLKGRKKGDAVKTAEKIRRAVEASPYEDGD-VVLPI 441 Query: 520 SASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + SLGV+ E + AD+ LY AK++GRNR ++ Sbjct: 442 TVSLGVAE--HHPGESRETTIARADQALYRAKESGRNRTESA 481 >UniRef50_A9L0C9 Diguanylate cyclase n=2 Tax=Shewanella baltica RepID=A9L0C9_SHEB9 Length = 466 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 69/243 (28%), Positives = 114/243 (46%), Gaps = 4/243 (1%) Query: 322 IRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIR 381 R ++ +W + ++ TL G R G + ++ + +L + + Sbjct: 214 ARSNNVLYTWLSVALLASLIDVTLTLFAGARFSLGWYAARISSSVSSM-VLLCALLWEVN 272 Query: 382 RMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFK 441 R+ SL Q+ DTLT L+NR L + + H+ P ++ +D+DHFK Sbjct: 273 RLYVATQRANESLYQQSVKDTLTGLFNRRYLESQLAIHIDHAKRHKEPLCLLVLDVDHFK 332 Query: 442 AINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERI 500 A ND+ GH AGD L A + SL R D R GGEEF V+LP + ++AER+ Sbjct: 333 AFNDQHGHLAGDDCLVTVAKQLEQSLYRPADFIARYGGEEFIVVLPHTDAKDGMQIAERL 392 Query: 501 RLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 RL ++ +++ + + ++ S+G + + + L AD LY AK AGRN V Sbjct: 393 RLNVSAEKIEY-QGQLLSVTISIGCAVLR-HSEETAQSLLIAADSALYQAKAAGRNCVKV 450 Query: 561 SDN 563 + + Sbjct: 451 AVD 453 >UniRef50_C8VWV8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWV8_DESAS Length = 512 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 94/451 (20%), Positives = 179/451 (39%), Gaps = 25/451 (5%) Query: 113 AWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVE 172 + +E N +RT L+ L R +L++ +++ ++++ Sbjct: 83 IFSLEYNNKRTKTAIKAGIFLIPILTLFFRYTSNLNHLFYVSVQ---------KTTNLFF 133 Query: 173 QAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHAS 232 +Y+ + +Y + + Y + F + R Sbjct: 134 PVLYIVKGPWYWVHAIYTTSCFIVVNYVYF-----FTYRKSTGSIRRQCLLLLIASLFPW 188 Query: 233 NTEPQVTVSV-PVDSN-NYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLT 290 + +++ P++ + + ++I + ++ I + + + Sbjct: 189 ISYLLDLLNISPLNIDWGAFAVTSSVAIFLVAYLRYQFLNIKPLARDKVFESTNDGIIVL 248 Query: 291 SSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEG 350 +N + F+P + E+ IRM + + ERL D +L V E Sbjct: 249 DANNNVID---FNPSAEVIFPGLDENCIGKNIRMV--FETNERL--VDSILNCVEFQYES 301 Query: 351 VRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRG 410 + D+ + + L + + + + ++ + L A D LT +YNR Sbjct: 302 LS-DYKKNYYRVQTVKILESRDRGVGFLITFNDITKYMNMMEELNHLASRDALTGVYNRR 360 Query: 411 ALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQ 470 E + + + P S+I +DLD FK IND +GHQAGD VL A + S+R+ Sbjct: 361 YFAELSSLELSKSRRYNMPASLIILDLDFFKQINDNYGHQAGDTVLKEIADICRKSIRSI 420 Query: 471 DVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEE 530 D+ GR GGEEF + LP L + V+ RI + ++ + +I+++AS+G S E Sbjct: 421 DILGRYGGEEFVIFLPNTKLEDCRMVSNRILNNIASA-VICYEGKSIKVTASIGTSGVEF 479 Query: 531 TGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 D + + AD+ LY AK GRN + +S Sbjct: 480 VSDENLDHFLKTADQALYQAKLDGRNCLRSS 510 >UniRef50_A8ZX32 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZX32_DESOH Length = 396 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 81/277 (29%), Positives = 123/277 (44%), Gaps = 21/277 (7%) Query: 286 LRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVH 345 ++SS D + L + D+ G R + + V Sbjct: 136 GASISSSLADIRKVRLAYLASFGALVAFIVMDSSGMFRHAPLFTRIPLHPDGSPLPVWFG 195 Query: 346 TLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTR 405 + I ++L L+ T++ + +R V + + D LTR Sbjct: 196 V----------QVFITVSLTIMLYITIVTFKRWGVREDV---------YRKMSTVDGLTR 236 Query: 406 LYNRGALFEKARPLAKLCQTHQHP-FSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLIS 464 L NR E++ Q S I +D+DHFKAIND +GH AGD+VL A +++ Sbjct: 237 LTNRRTFIERSEKELSSGQRRPSSHISCIMIDIDHFKAINDTYGHAAGDKVLVKIATILT 296 Query: 465 SSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLG 524 R D GR GGEEF ++LP +L A +VAER R + E+++ I+++AS G Sbjct: 297 EKARPTDEVGRYGGEEFAMLLPATTLAGAVKVAERQRASIANAEIIV-DGNIIQVTASFG 355 Query: 525 VSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 V+S + +L AD LY AK+AGRNRV A+ Sbjct: 356 VASCPSDDIDNINELLKTADVALYEAKRAGRNRVVAA 392 >UniRef50_Q47Y21 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y21_COLP3 Length = 722 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 63/181 (34%), Positives = 95/181 (52%), Gaps = 1/181 (0%) Query: 381 RRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHF 440 ++ + Q Q A D LT NR E H P S++ +D+DHF Sbjct: 541 QKEIKYRKSQQDHFQQLALTDALTGAVNRHHFNEVLDQEIANVNNHGSPLSIMLLDIDHF 600 Query: 441 KAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERI 500 K++NDR+GH GD VL ++R+ DV R+GGEEF +I+P L A + AER+ Sbjct: 601 KSVNDRYGHGVGDEVLVMFYQTCVEAVRSSDVVARIGGEEFVIIMPNTQLVNAQKFAERL 660 Query: 501 RLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 R K+ + E+ IA + I ++ S+GVS + + E + AD+ LY AK +GRN+V Sbjct: 661 RQKIAKLELNIANNQ-ISVTVSIGVSQWQSEYFTNAETFVAHADKSLYQAKNSGRNKVVV 719 Query: 561 S 561 + Sbjct: 720 A 720 >UniRef50_A6EXE2 Serine/threonine kinase with two-component sensor domain n=2 Tax=Gammaproteobacteria RepID=A6EXE2_9ALTE Length = 1684 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 83/361 (22%), Positives = 148/361 (40%), Gaps = 26/361 (7%) Query: 228 PEHASNTEPQVTVSVPVDSNNYWYGVL----GMSIPVRTMQQFLRNAIDKNLDGEYQLYD 283 E + Q T+++ +++ +G L G + V + + + + + L D Sbjct: 1326 GEMVLDQLLQKTLAILLENAGGQWGCLIVRAGGAFSVEAIIRPEQPSPQVEIPTHSTLSD 1385 Query: 284 SKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDT----RGGIRMDSRYVSWERLDHFDG 339 + + L P +F E +L AM + + R V + + Sbjct: 1386 RQGKALAL--PMSVISQVFQRGEAVVLHDAMADGPFVNDPYTVHLHPRSVLCVPIIVRER 1443 Query: 340 VLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSL----- 394 V+ + F + L L + + + + + ++ + +L+ + Sbjct: 1444 FEAAVYMENNLTDAVFTDDRVELIQLLSAQAAVAIENARLYTQVQDHSRLLEEKVVERTA 1503 Query: 395 ---------QWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAIND 445 Q A D LT + NR + + + P SV+ +D+DHFK ND Sbjct: 1504 ELEELNEELQRLADRDGLTGVANRRSGDAYLKDTWLRLRRQPQPLSVVMLDVDHFKHFND 1563 Query: 446 RFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKL 504 +GHQ GD L A + + L R+ D+ R GGEEF +ILP A +VAE R+ + Sbjct: 1564 NYGHQMGDECLIRVAETLQAQLQRSTDMVARYGGEEFILILPNTDENGAIQVAENARVAI 1623 Query: 505 NEKEMLIAKST-TIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 ++ ST I+ S+G ++ E+L AD LY AK++GRNR+ A+++ Sbjct: 1624 EALDIRHDHSTARDCITVSVGCATIVPDDKSSLEELVFAADAALYKAKESGRNRIQAAES 1683 Query: 564 A 564 A Sbjct: 1684 A 1684 >UniRef50_D1C9S7 Serine/threonine protein kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9S7_SPHTD Length = 1765 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 107/514 (20%), Positives = 179/514 (34%), Gaps = 49/514 (9%) Query: 81 LRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNL- 139 L+ + L L + D + DE + R ++G LV+ + Sbjct: 1266 LQQHLDALLQVSLATATALDPEQQSRAALDEAVRILGAERAFLFRIDGPDLRLVAGRDAS 1325 Query: 140 -----LSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRN 194 R+ E A ++ + + + +++ ++ TL R Sbjct: 1326 GNPVTEPRDFSRTVVETVRATGQPMIVSASSDGPVLGSESIVAYDLRSIIAAPLTLRERT 1385 Query: 195 VPTRYYGYV-TQPWFIGHSQRENRHRA---------VRWFTSQPEHASNTEPQVTVSVPV 244 Y + F R A R + + S + ++ Sbjct: 1386 FGVLYLDNRLARGVFTPADLDILRAIAGSIAIALETARLAQIEAQFESERQQRLLAERLR 1445 Query: 245 DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLT---SSNPDHPTGNI 301 D L ++ + + L + + + +L ++ PD G + Sbjct: 1446 DLTGTLTATLDLTQVLDRLLTSLAAVVPYDTAAVVLHHADRLELAMVRGTTRPDEAPGLV 1505 Query: 302 F---------------DPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHT 346 P +A RGG+ ++ + + V Sbjct: 1506 IPLANDILLAEVVATGQPLVIADTRDDPRCAHRGGMPDLRAWLGVPLISE--SRVAGVVV 1563 Query: 347 LSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRL 406 L+ + G FG + +A + + L + +Q A D LT Sbjct: 1564 LTSQISGAFGEREAGIAFTFAGQAGVAI-----------ENARLFAEVQRLAVTDDLTGT 1612 Query: 407 YNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSS 466 YNR L A Q P + I +D+D FK +ND GH GD VL A + S Sbjct: 1613 YNRRHLLTTAERELSRAQRFNRPLAAIILDIDEFKRVNDAHGHAVGDEVLRAVADRLRSG 1672 Query: 467 LRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVS 526 LR DV GR GGEEF +ILP L A ++AER+R + + + + + ++ SLGV+ Sbjct: 1673 LREVDVLGRYGGEEFVIILPETDLISAYQIAERLRNSIAAEPIATSTG-PVSVTISLGVA 1731 Query: 527 SSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 +++ T DF L S D LY AK+ GRNRV Sbjct: 1732 AADPT-TPDFASLLSRIDDLLYTAKRRGRNRVVV 1764 >UniRef50_Q39ZK6 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Geobacter RepID=Q39ZK6_GEOMG Length = 314 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 118/261 (45%), Gaps = 5/261 (1%) Query: 307 LALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLW 366 + L+ +E G R + + E V++ + + + Sbjct: 49 VDLVLCDLEMPRMDGFRFLTMMRAREEFQDL-PVIILTGREDRDTKIRGLEQGASDFVTK 107 Query: 367 ALFTTMLLISWYVIRRM---VSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLC 423 T L+ V +M + L+ + D LT L+NR L E + Sbjct: 108 PFDTGELVARVRVQLKMKGLQDELKRSNEMLRTLSITDPLTHLHNRRHLMEMVDKEFQRS 167 Query: 424 QTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCV 483 P S++ +D+D+FK IND +GHQ GDRVL+ A ++ LR+ D+A R GGEEF + Sbjct: 168 SRKGAPLSLVILDIDYFKKINDTYGHQEGDRVLTILADIVRRRLRSYDLAARYGGEEFVL 227 Query: 484 ILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLA 543 +LP + EA +AER+RL++ E + + I+ SLGV++ + + L A Sbjct: 228 LLPETPVQEALSIAERLRLEVQEHVFEGSLGGLV-ITISLGVATYPSSRVESIDSLFRQA 286 Query: 544 DRRLYLAKQAGRNRVFASDNA 564 D LY AKQ GRNRV A Sbjct: 287 DEALYRAKQGGRNRVELMAGA 307 >UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IJX5_PSEHT Length = 621 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 63/183 (34%), Positives = 88/183 (48%), Gaps = 2/183 (1%) Query: 378 YVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDL 437 + ++ + + L+ D LT + NR +K + + Q P SVI +D+ Sbjct: 428 FELQVTLRELEEKNRELEQLNMEDPLTGIKNRRFFDKKLVMELRRSRREQTPLSVIMLDI 487 Query: 438 DHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEV 496 D FK IND +GH GD+V+ AA I L R D R GGEEF V+LP A + Sbjct: 488 DKFKVINDTYGHLTGDQVIRTAADTIKKQLQRPLDEVARYGGEEFVVLLPNTQNDGAIAI 547 Query: 497 AERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRN 556 AE+IR + + TTI + S GV +S + E AD+ LY AKQ GRN Sbjct: 548 AEKIRHAIATNNV-HVAGTTISFTISAGVYTSVAEDINNPEIFTERADKALYFAKQHGRN 606 Query: 557 RVF 559 +V Sbjct: 607 QVI 609 >UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDS7_9PROT Length = 750 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 74/234 (31%), Positives = 115/234 (49%), Gaps = 8/234 (3%) Query: 329 VSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLW-ALFTTMLLISWYVIRRMVSNM 387 E + H + + ++ + + I +T W + +LL +I +S + Sbjct: 524 RVLEDIPHIKKEKILSNYINVNYQQGYTEKYIKVTYFWFGIVIIILLGIILIIIYQLSKI 583 Query: 388 YVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRF 447 L L+ A++D LT +YNR + + + ++ P S+I +D+D+FK IND F Sbjct: 584 KKLSKQLETMAFYDKLTNIYNRAKFKNILKEFIEYSKRYKTPLSLIFLDIDYFKKINDNF 643 Query: 448 GHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEK 507 GH+ GD VL + SLR DV GR GGEEF ++LP + A VAE+IR + Sbjct: 644 GHEKGDLVLKEMVKVAKLSLRESDVFGRWGGEEFLILLPNTDINGAKIVAEKIRDAIESH 703 Query: 508 EMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + I+++ SLGV+ +E D E + AD LY AK+ GRNRV Sbjct: 704 DF-----DGIKVTVSLGVTQLKE--DDTIESFVNRADIALYQAKKEGRNRVVVF 750 >UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47W79_COLP3 Length = 334 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 75/293 (25%), Positives = 125/293 (42%), Gaps = 4/293 (1%) Query: 273 KNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMD-SRYVSW 331 + D +++ L+ T P G L + + ++++ + SW Sbjct: 41 IDADFNIVIWNRFLQVHTDKVPGSIIGQSIFSAFPELPQRWLSRKLSSVLQLNTPSFCSW 100 Query: 332 ERLDHFDGVL-VRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVL 390 ++ H + R T + T + +L+ + Sbjct: 101 QQRHHLFELPHTRPITTDSEFMAQNCTFLPIETDVNGKHICILIEDVTDACHYQMQLQKT 160 Query: 391 QSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ 450 + + + D LT++YNR + + H S+I +DLDHFK +ND +GHQ Sbjct: 161 LAEIAQISRIDGLTQVYNRRHWQDSLEQEYAKARRHDKKLSLIMLDLDHFKLLNDNYGHQ 220 Query: 451 AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEML 510 GD VL + LIS+ LR +D GR GGEEF +ILP A E+A+RI + Sbjct: 221 GGDMVLIEVSALISTLLRVEDTFGRYGGEEFAIILPETDSAGAIELAQRICRIIATTPFT 280 Query: 511 IAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 I+++ SLGV+ + + ++E+L + AD LY AK GRN+V + Sbjct: 281 YND-QVIKVTVSLGVAQLS-SKESNYEELITQADSALYQAKSQGRNQVCNAAE 331 >UniRef50_A3Y5H4 Diguanylate cyclase (GGDEF domain) n=1 Tax=Marinomonas sp. MED121 RepID=A3Y5H4_9GAMM Length = 419 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 66/247 (26%), Positives = 112/247 (45%), Gaps = 4/247 (1%) Query: 315 EHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLL 374 + + YV F G + +S+ + + +L L + ++ Sbjct: 146 LDGEITALDVVEVYVPMMIAGEFIGAFELYYDISDRIAAMKAHMEWVDRMLLLLSSIAII 205 Query: 375 ISWYV---IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFS 431 ++ + +++ + L A D LT +YNR + + K Q S Sbjct: 206 TAFVIGIGYKKVQQIREEYELELIEMATKDKLTNIYNRRSFEARLLQDLKQYDKFQTELS 265 Query: 432 VIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLT 491 +I D+DHFK +ND +GHQAGD VL+ A + ++R+ D+ R GGEEF ++LP Sbjct: 266 IILFDVDHFKFVNDTYGHQAGDSVLTLLAEIAQQTVRSNDIVARYGGEEFIILLPNTGKN 325 Query: 492 EAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAK 551 + +AE++R + +S I+I+ SLGV+ + + + L AD LY AK Sbjct: 326 GSQVIAEKLRSAIENAAFDT-QSYKIQITISLGVACISDVQHPNLDNLIKSADDALYYAK 384 Query: 552 QAGRNRV 558 GRN+V Sbjct: 385 HNGRNQV 391 >UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8FZ07_SHESH Length = 298 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 74/271 (27%), Positives = 124/271 (45%), Gaps = 10/271 (3%) Query: 296 HPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDF 355 +G + +A + + + GG+R ++ L G ++ F Sbjct: 13 VISGALLLAMAIAPVWKIVRQLPTGGLRYSWGFLILLILIFIAGYVIYAKFSPVQFSQLF 72 Query: 356 GSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEK 415 + + A+F ++ R + +L+ + D+L ++NR L + Sbjct: 73 DLVVPIIFFGGAIFVFVVCSLSLRTTRDIMQ----NYALKQENITDSLMGIFNRRYLDRR 128 Query: 416 ARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGR 475 + + + P S+ +D+DHFK +ND +GHQ GD VL + A LI SLR DV R Sbjct: 129 LKDETERALNYSQPLSIFLIDIDHFKQVNDNYGHQVGDLVLKNIAQLIKHSLRESDVLAR 188 Query: 476 VGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA-----KSTTIRISASLGVSSSEE 530 GGEEF VILP + + +AER+R + + ++ + S +I ++ S+GV+ Sbjct: 189 FGGEEFVVILPRTKDSTSYTLAERLRHVVEDFQLTLPEESDKDSLSISVTVSIGVAGLNA 248 Query: 531 TGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 D + L ADR LY AK+ GRN+V S Sbjct: 249 QC-KDCQCLIENADRALYQAKRNGRNQVITS 278 >UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6Y0_KANKD Length = 469 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 73/280 (26%), Positives = 128/280 (45%), Gaps = 16/280 (5%) Query: 295 DHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGD 354 ++ + ++F L +L Q + + + + L G + + Sbjct: 183 EYLSISLFLGAVLWMLVQNIRGYMPLQYGIAMIWFALSCLSFSIGTVWDHQWWLAHIIFA 242 Query: 355 FGSISIALTLLWALFTTMLLISWYVI--------------RRMVSNMYVLQSSLQWQAWH 400 G + ++ ++ A TT + Y R + + + L+ A Sbjct: 243 SGFLLLSFGVVQAFLTTGSFKTIYSQTELFQQIIREKKKSERALIELKAVNQKLEELAAT 302 Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D+LTR+ NR +++ + ++ +D DHFK IND++GHQAGD+VL Sbjct: 303 DSLTRVANRREFMKRSEEEMSRSSRNSTDLCLMVIDFDHFKEINDQYGHQAGDKVLKDFV 362 Query: 461 GLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRIS 520 L +R D+ GR+GGEEF ++LP ++ A +VAER+R + E+ ++I S I+++ Sbjct: 363 KLAKEVMRPSDLLGRIGGEEFALLLPETNIRSAVKVAERLRQHIEEESIVIG-SKRIKLT 421 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 S+GV+ + D ++ AD LY AK GRNRV Sbjct: 422 ISIGVAEYQPKVD-TVKKWLHRADEFLYQAKDKGRNRVVV 460 >UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XPG9_DESMR Length = 368 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 80/216 (37%), Positives = 113/216 (52%), Gaps = 4/216 (1%) Query: 351 VRGDFGSISIALTLLWALFTTMLLI---SWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLY 407 VR ++ +W L L+ + + +S L+ L A D LT L Sbjct: 146 VRRMEARLATPRGPVWCLVGAALVEPDGHVVGMTQDISARKALEEELLRLAASDPLTGLA 205 Query: 408 NRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL 467 NR FE A + + + P S+I +D+DHFKA+ND +GH AGD VL AG + SL Sbjct: 206 NRRGFFEGAARMLGMARRCGTPLSMIMLDIDHFKAVNDAYGHDAGDAVLRAVAGRLRESL 265 Query: 468 RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSS 527 R D+AGRVGGEEF V+ PG L E+AER+RL L + ++ A ++++AS GV+ Sbjct: 266 RVSDLAGRVGGEEFAVLCPGTDLAGGVELAERLRLALEDM-VVTADCRAVKVTASFGVAQ 324 Query: 528 SEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 + D + ADR LY AK+ GRNRV + Sbjct: 325 CRDDRDAAPSACLTRADRALYAAKRGGRNRVCLESD 360 >UniRef50_B5VVN4 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Arthrospira RepID=B5VVN4_SPIMA Length = 652 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 77/325 (23%), Positives = 129/325 (39%), Gaps = 9/325 (2%) Query: 239 TVSVPVDSNNYWYGVL-GMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHP 297 + ++++ + V+ +S P + + N + + L+ + SN D Sbjct: 329 ALIYRLENDGNYRVVMESVSPPWKPLLGTTINYSGLSEVITEMAAANYLKIWSISNVDKA 388 Query: 298 TGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGS 357 I EL L + R + L+ +H Sbjct: 389 NIPINLRNELDELQVKSKLILPIIHRHPDLRSQETEYPNCLWGLLVIHQCDNTRGWQPEE 448 Query: 358 ISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKAR 417 I ++ + + + + + + L+ A D LT + NR + Sbjct: 449 IEALRSIATPIAVAIQQ------GELHAKLQTVNQELERLASLDGLTGVANRRQFDLHLK 502 Query: 418 PLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRV 476 + P SVI D+D FKA ND +GHQ GD L A ++ + R+ D+A R Sbjct: 503 REWQRLLRETAPISVIMCDVDFFKAYNDTYGHQMGDECLKQIAKILENCAQRSTDLASRY 562 Query: 477 GGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKST-TIRISASLGVSSSEETGDYD 535 GGEEF ++LP + A +VA++I+ ++ E+ KS + ++ SLGV+ D Sbjct: 563 GGEEFVIVLPNTGIKGALQVADKIQHQIRALEIEHQKSEVSGYVTLSLGVACQVPNHDRS 622 Query: 536 FEQLQSLADRRLYLAKQAGRNRVFA 560 E L LAD LY AK GRN + A Sbjct: 623 PESLIKLADAALYEAKSKGRNCIIA 647 >UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRD6_THISH Length = 464 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 104/211 (49%), Gaps = 2/211 (0%) Query: 351 VRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRG 410 V+ + S + L + + + L+ A D LT + NR Sbjct: 256 VQAFHTTRSFSTVYSQMDMMAQLREQQAWTQEALLQVQEANRKLEQLASTDALTGVANRR 315 Query: 411 ALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQ 470 L E+A + H P S++ +DLDHFK IND +GH AGD VL A I SLR Sbjct: 316 QLVERADMEVPRSERHGAPLSLLCLDLDHFKRINDDYGHLAGDEVLKQVAEAIQQSLRPS 375 Query: 471 DVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEE 530 D+ RVGGEEF V+LP L A +VAERIR+KL ++ + + + ++ S+G + Sbjct: 376 DLLARVGGEEFHVLLPDTDLAGARDVAERIRVKLEGLDIPV-QGVVLHVTVSVGCAQLGP 434 Query: 531 TGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 G D + L AD RLY AK GRNRV + Sbjct: 435 DG-ADMKSLTHTADERLYQAKALGRNRVVIA 464 >UniRef50_Q2RUX2 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RUX2_RHORT Length = 632 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 83/310 (26%), Positives = 132/310 (42%), Gaps = 20/310 (6%) Query: 256 MSIPVRTMQQFLRNAID----KNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLA 311 ++ M+ F+ A D + G ++ L + + G + A A Sbjct: 330 LAEGEERMRGFIMAARDAVVIIDQKGIISEFNPSATELFGYDVEEVRGQSVNMLMPATYA 389 Query: 312 QAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTT 371 + + R G R + R G R + I LT+ F Sbjct: 390 RDHDGHLRKGKPSGQRAIGRGR-------------EMIGRRKNGSEFPIELTVGTQSFDG 436 Query: 372 MLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFS 431 + + R ++ + +L+ A D LT + NR + E++ L L H S Sbjct: 437 TRV--HIGVIRDITERKATEETLRRLANIDGLTGVLNRRSFTEESELLLSLANRHGRRLS 494 Query: 432 VIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLT 491 ++ VD DHFK +ND +GH AGDRVL G I+ LR D+ GR+GGEEF ++LP Sbjct: 495 MMIVDADHFKGVNDTYGHDAGDRVLKALTGEIAGVLRKTDLLGRIGGEEFAILLPETDQE 554 Query: 492 EAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAK 551 A +A R+ L + E+ + + ++++ S+GVS T F+ + AD LY AK Sbjct: 555 GAEGLAWRVVLAIRALEVPLPEGGVLKVTVSVGVSC-RNTEAATFDWMLKEADTALYAAK 613 Query: 552 QAGRNRVFAS 561 GR+RV Sbjct: 614 HGGRDRVACF 623 >UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgaris RepID=B8DLV9_DESVM Length = 381 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 103/208 (49%), Gaps = 5/208 (2%) Query: 357 SISIALTLLWALFTTMLLISWYVIRRMVSNMYV--LQSSLQWQAWHDTLTRLYNRGALFE 414 S + + + AL + R + + L L A D LT L NR AL E Sbjct: 160 SQAFRIRYMLALLCCGIFAGLAEYTRRHTQRLLILLTQQLAESARTDELTGLANRRALCE 219 Query: 415 KARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAG 474 + + P S+ D+DHFK++ND +GHQ GD VL AGL+ +LR QD Sbjct: 220 RLEYEQVRARRTGRPLSIAICDIDHFKSVNDCYGHQCGDLVLQSVAGLLHDNLRHQDTIC 279 Query: 475 RVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDY 534 R GGEEF ++LP AA +AE++R + E + ++ S GV + GD Sbjct: 280 RWGGEEFLLLLPETDEAGAARLAEKLRSLVEAMEY-SYHGIPVSVTLSFGVHTCGPEGDI 338 Query: 535 DFEQLQSLADRRLYLAKQAGRNRVFASD 562 D+ AD++LYLAK+ GRNRVFA + Sbjct: 339 DYH--IRKADQKLYLAKEQGRNRVFAGE 364 >UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C2A6_ACAM1 Length = 420 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 91/189 (48%), Gaps = 2/189 (1%) Query: 374 LISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVI 433 L + + + L A HD LT L NR E + + K Q Q P S++ Sbjct: 227 LYAQQALEATNKKLDEANKQLSLIANHDALTGLANRRRFDEYLQQIWKQTQREQQPLSLL 286 Query: 434 QVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTE 492 D+D FK ND +GH GD L A I ++ R D+ R GGEEF ++LP L Sbjct: 287 ICDIDFFKQYNDTYGHLEGDICLRTVAQKIHQTIVRPLDLVARFGGEEFAIVLPNTDLEG 346 Query: 493 AAEVAERIRLKLNEKEMLIAKSTTIR-ISASLGVSSSEETGDYDFEQLQSLADRRLYLAK 551 VAER+R+ + + ++ S+ ++ S+G ++ L S AD+ LY AK Sbjct: 347 GQVVAERLRMIIQKSQLPHRGSSVSEFVTVSIGAATVRSHPHTSVSSLISRADQALYQAK 406 Query: 552 QAGRNRVFA 560 Q+GR++V A Sbjct: 407 QSGRDQVVA 415 >UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desulfovibrio RepID=Q310L5_DESDG Length = 525 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 62/179 (34%), Positives = 93/179 (51%), Gaps = 1/179 (0%) Query: 386 NMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAIND 445 +L ++ QA HD LT+L+NR + R + P +++ +D+D+FK IND Sbjct: 339 KNALLFREMRLQADHDGLTQLHNRRHFDTRLREELDRHGRYSMPLTLMMLDIDYFKQIND 398 Query: 446 RFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLN 505 RFGHQAGD VL A ++ ++R D R GGEEF ILP +A +AER+R + Sbjct: 399 RFGHQAGDAVLRELASVLRETIRTTDYCARYGGEEFVAILPHTDEQQARVLAERLRKNIE 458 Query: 506 EKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 + TI+ + S+G++ + ++L AD LYLAK GRN V + Sbjct: 459 SRVFRHH-GKTIQATVSIGLTGFKPGALTPRDELVREADAALYLAKANGRNVVCTFAGS 516 >UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z7X2_9GAMM Length = 365 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 71/218 (32%), Positives = 100/218 (45%), Gaps = 12/218 (5%) Query: 349 EGVRGDFGSISIALTLLWALFTTMLLISWYV------IRRMVSNMYVLQSSLQWQAWHDT 402 E + F +I+ + AL L+ Y+ + + L++ A D Sbjct: 150 EEDKKVFETIARMIAAKLALIEQTELVKKYMAELEAKVEERTLELKRANEKLEYLASTDP 209 Query: 403 LTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGL 462 LT L NR L E + +Q S+I +D+DHFKA+ND GHQ GD V++ + Sbjct: 210 LTELVNRRRLDEVLEQEFERTSRYQGELSLILLDIDHFKAVNDTRGHQVGDEVIAGVGNI 269 Query: 463 ISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISAS 522 R D AGR GGEEF ++ P S A AE++RL + E +R+SAS Sbjct: 270 AKQMSRKSDTAGRWGGEEFLIVAPQTSCDNAVAFAEKLRLSIENTEFSSG----VRVSAS 325 Query: 523 LGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 GV+S E + + AD LY AK GRNRV Sbjct: 326 FGVASLETG--ETIQLVLKRADEALYRAKHNGRNRVET 361 >UniRef50_B9ZPE0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZPE0_9GAMM Length = 424 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 78/338 (23%), Positives = 132/338 (39%), Gaps = 22/338 (6%) Query: 223 WFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLY 282 + + + VS+ D + + + ++ + + +G Sbjct: 108 YISPVYAEEAPERVTHYVSLQQDVTDERARDEQLRLLSTAVEVSGDPVLITDPEGTITYV 167 Query: 283 DSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLV 342 ++ L + G + A + + DG L+ Sbjct: 168 NAAFEELMGYSRSEVLGENPRRFKSGRQDDAFYQGMWRALERGESFRGEFLNRRRDGSLI 227 Query: 343 RVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDT 402 + V D G IS + + + V++ ++ ++ A D Sbjct: 228 HLEQTITPVLDDHGKIS----------------HYVALGKDVTDRLRMEDEIRRVAHTDW 271 Query: 403 LTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGL 462 LT + NR +L + Q + P S+I DLDHFKA+ND++GH+AGD VL A Sbjct: 272 LTGVANRLSLGNTLEAEIERSQRYGRPLSLIMFDLDHFKAVNDQYGHEAGDEVLKALAQT 331 Query: 463 ISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISAS 522 +S+ LR D GR GGEEF +++P L A +AE++R ++ + ++AS Sbjct: 332 VSAELRDADTLGRWGGEEFIIVVPETRLVGATALAEKLRQAVSTMSVPGVPG----VTAS 387 Query: 523 LGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 GV+ L AD +Y AKQAGR+RV A Sbjct: 388 FGVAELASGDSAKL--LARRADEAMYQAKQAGRDRVVA 423 >UniRef50_C9YCX8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCX8_9BURK Length = 600 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 58/183 (31%), Positives = 84/183 (45%) Query: 380 IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDH 439 + + V L+ + D LT + NR + + P +++ +D+D Sbjct: 414 VEERTRQLQVANERLEALSMVDGLTGIANRRHFDQVLHKEWTRLERAGQPLALVMLDVDW 473 Query: 440 FKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAER 499 FK ND FGHQAGD L A IS RA D+ R GGEEF +I PG +A ++A+R Sbjct: 474 FKRYNDHFGHQAGDECLRAVAQAISGVSRASDLVARYGGEEFVIIAPGTDGPQALQMAQR 533 Query: 500 IRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 + M + ++ S GV+ + D E L AD LY AK GRNRV Sbjct: 534 ACDAVRALGMPHPLAYEAVVTVSCGVAVTVPGPDDSLENLLGQADDALYEAKAQGRNRVV 593 Query: 560 ASD 562 ++ Sbjct: 594 LAE 596 >UniRef50_C3JZH6 Putative regulatory protein n=2 Tax=Pseudomonas RepID=C3JZH6_PSEFS Length = 801 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 89/393 (22%), Positives = 149/393 (37%), Gaps = 42/393 (10%) Query: 185 STQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPV 244 ++ + +P V P +N H A W + + + T + +V + Sbjct: 430 ASLSVALGKRIPASQAMLVESP--------DNLHEAREWTLIRQDGSPLTVNMLA-TVLL 480 Query: 245 DSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDP 304 D + W G L + +L K D L+ L++ P +P Sbjct: 481 DDHGLWIGHLAI---------YLDITEQKRAYEALAARDRLLKKLSAHVPGGIFQFTLEP 531 Query: 305 RELALL------AQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGS- 357 ++ + + G ++ D++ V +ER+ D VR ++ Sbjct: 532 QDNWKFIYASDGMRDIYEIEPGVLQQDAKKV-FERIHPLDAERVRASIRLSALQLSHWRE 590 Query: 358 ----------ISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLY 407 + W+ +S++ ++ L+ + D+LT ++ Sbjct: 591 EYRVQLPQRGLRWIRGEATPEELPAGGTLWHGYVSDISDLKRVEEELRALSITDSLTGIH 650 Query: 408 NRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL 467 NR ++ + SVI +D+DHFK IND+ GH GD VL IS L Sbjct: 651 NRRYFQDRLKAEMVRLNRTSGALSVIMLDIDHFKRINDQHGHAVGDGVLQELCKRISQRL 710 Query: 468 RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSS 527 R DV R+GGEEF V+ P +A +A + L M ++AS GV+S Sbjct: 711 RRTDVFCRLGGEEFMVLCPHTDGDQAYSLATELWASLRSAPME----PVGIVTASFGVAS 766 Query: 528 SEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 D + L AD +Y+AKQ GR+RV A Sbjct: 767 WRV--DEGIDGLLLRADSAVYVAKQGGRDRVEA 797 >UniRef50_Q3A8D4 Putative sensory transduction system, regulatory protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A8D4_PELCD Length = 536 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 74/286 (25%), Positives = 115/286 (40%), Gaps = 16/286 (5%) Query: 294 PDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHF---DGVLVRVHTLSEG 350 PD + D R A + + + G+ + S ++ + L Sbjct: 242 PDLLAVRLIDARNSAANRELYAYRRQTGVPLPSAFICEHDVPVVGKAHWRLQAEPVGDYF 301 Query: 351 VRGDFGSISIALTLLWALFTTMLLISWYVIRRMVS----------NMYVLQSSLQWQAWH 400 R + + L + L+ W+V RR S + L + Sbjct: 302 SRYRSVTPWLLGLAGLLLTLMVPLVMWFVSRRAASVDKLVAQRTYELDEANRRLASLSLT 361 Query: 401 DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAA 460 D LT + NR + + K +HP S+I VD+DHFKA ND +GH AGD L A Sbjct: 362 DGLTGIANRRSFDDHLAQEWKRALRDRHPLSLIMVDIDHFKAYNDYYGHLAGDDCLRQVA 421 Query: 461 GLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIR- 518 ++ S + R D+ R GGEEF +ILP A + E R + ++ S Sbjct: 422 RMLQSVVARPGDLVARYGGEEFALILPQTD-HGAKSLGESCRAAVAGGKIPHHASPVKPV 480 Query: 519 ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA 564 ++ S+GV++ + D QL AD+ +Y AK GR+ V A Sbjct: 481 VTVSVGVATMIPHVEDDPSQLIKAADQAMYRAKLLGRDHVVVEAPA 526 >UniRef50_Q1JZ09 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ09_DESAC Length = 521 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 88/366 (24%), Positives = 148/366 (40%), Gaps = 15/366 (4%) Query: 210 GHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRN 269 Q+ H + P TV V + G R +Q+ Sbjct: 157 AQMQQYELHLHHYPVIPEDHFVITGLPHDTVVKAVQTGEADVGFARAGTLERMVQERTIA 216 Query: 270 AIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELAL---------LAQAMEHDTRG 320 + E D R T P+ P + + + + + Sbjct: 217 FSQFKIIHEQPFKDFPARVSTHLYPEWPIAALRHVSQQDQSIVLSALLQMHRIPDGKLPF 276 Query: 321 GIRMDSRYVSWERLDHFDGVLVRVH---TLSEGVRGDFGSISIALTLLWALFTTMLLISW 377 G+ S + ++++ L + + + + ++L++ Sbjct: 277 GVCGFSPPADYNQVENLMRTLRLPPFDRIPEYRLTDIWTQYKTQSSFVLVAMAIIVLLTC 336 Query: 378 YVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDL 437 Y+ +Y+ Q L + D LT LYNR K Q + P +V+ +D+ Sbjct: 337 YLFVSR-RKLYLAQQKLMRISERDPLTGLYNRRKFMNYYEKEWKAAQRSKTPLAVLMIDI 395 Query: 438 DHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEV 496 DHFK ND +GH AGD L+ AG I + + R +D R GGEEF +LP AA+V Sbjct: 396 DHFKDYNDHYGHLAGDVALTAVAGAIETRITRPRDCTARYGGEEFIGLLPETDDLAAAQV 455 Query: 497 AERIRLKLNEKEMLIAKSTTI-RISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGR 555 AE+IR+++ + ++ A S T I+ S+G++S +E + +L +LAD+ LY AK+AGR Sbjct: 456 AEKIRIQVEKLQVQHAYSATADHITVSIGITSLQEGDKINRMELINLADKALYEAKEAGR 515 Query: 556 NRVFAS 561 N V + Sbjct: 516 NCVKIA 521 >UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2W1_DEIGD Length = 555 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 75/287 (26%), Positives = 113/287 (39%), Gaps = 10/287 (3%) Query: 276 DGEYQLYDSKLRFLT---SSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWE 332 GE L + LT P +F P + L H G+ SR Sbjct: 264 GGEIALLSASRNLLTVQLQWGFALPGPEVFGPEDCWALRLGQPHAAHAGL---SRPHCQH 320 Query: 333 RLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQS 392 + V + + + L A + + L++ Sbjct: 321 DTSGQPTLCVPLIAQGDTLGVVTLHFETGEALELARPLAQRFAERVALSLV---NLRLRA 377 Query: 393 SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAG 452 +L+ Q+ D LT LYNR L E Q + P S++ +D+DHFK ND +GH G Sbjct: 378 TLRQQSIRDPLTGLYNRRYLEETFTRELARVQRRRQPLSLLMIDVDHFKQHNDTYGHALG 437 Query: 453 DRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA 512 D +L A + R +D+ R GGEEF V+LP +A AE +R + + Sbjct: 438 DTLLRRLATHLQRFFRTEDIVCRYGGEEFVVLLPECDAPQAQARAEALRRSVENLAVTSN 497 Query: 513 KSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 + + ++ S+G +S + E L + AD LY AK GRNRV Sbjct: 498 DAEFVALTISIGGASWPDHA-TTPEDLLARADAALYRAKHRGRNRVE 543 >UniRef50_B2J0M5 Diguanylate cyclase with PAS/PAC and GAF sensors n=2 Tax=Nostocaceae RepID=B2J0M5_NOSP7 Length = 888 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 4/227 (1%) Query: 334 LDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSS 393 + +G + ++ + + LL L + + + + + + Sbjct: 655 VPILNGEHLWGLLIAHQCSAPRYWQAFEVNLLQQLASQVAIAIHQSV--LYQQVQAANEE 712 Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 LQ A D LT++ NR + + Q P S+I D+D FK ND +GH AGD Sbjct: 713 LQRLATLDGLTQIANRRRFDQYLENEWHRLKREQMPLSLILFDVDFFKRYNDTYGHLAGD 772 Query: 454 RVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIA 512 L + S + R D+ R GGEEF VILP + A VA+ IR + + + A Sbjct: 773 DCLRQLGSALKSVIKRPADLVARYGGEEFAVILPNTEIEGAISVAQTIRQAVYDLIIPHA 832 Query: 513 KSTTI-RISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 +S+ R++ SLGV+S + + L + AD+ LY+AKQ GR+RV Sbjct: 833 QSSVCDRVTVSLGVASIVPNCETSPQDLINAADKSLYIAKQQGRDRV 879 >UniRef50_C6BZS4 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZS4_DESAD Length = 635 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 74/305 (24%), Positives = 126/305 (41%), Gaps = 16/305 (5%) Query: 258 IPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHD 317 + + ++QF + + L DS R++ ++ FD + L + + Sbjct: 339 LAEQRLRQF--ERLVELSPDMVSLLDSDYRYVMVNDSYV---RFFDKPKEYFLGRPVYEV 393 Query: 318 TRGGIRMDS--RYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLI 375 T + D + + G V G R ++T Sbjct: 394 TGKDVFDDRSKKLIDSAFAGQTTGFEAWVDLPLVGKR------FFSVTYHPVDSVVGDGR 447 Query: 376 SWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQV 435 + ++ + ++ A D LT +NR +A + ++ + Sbjct: 448 LVSITAHDITEQKEMLEEVKRLASTDYLTGAHNRRHFMSRAETELDRLTRYGGELYLMML 507 Query: 436 DLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAE 495 D+DHFK IND +GH GD VL +LR DV GR+GGEEF +L S+ A + Sbjct: 508 DIDHFKNINDTYGHSVGDVVLKEMVKCCIETLRTSDVFGRLGGEEFAALLVHGSIDSAIQ 567 Query: 496 VAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGR 555 VAER+R + + E+ I + ++++ S+G++ D D E AD+ LY AK+ GR Sbjct: 568 VAERLREAIEDMEVRIGR-HVVKLTVSIGLTMV--CADEDIEIALKHADKCLYQAKEQGR 624 Query: 556 NRVFA 560 NRV + Sbjct: 625 NRVVS 629 >UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Desulfovibrio vulgaris RepID=A1VA66_DESVV Length = 827 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 89/372 (23%), Positives = 155/372 (41%), Gaps = 6/372 (1%) Query: 193 RNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYG 252 +V T Y ++ + R +R S ++ + + + G Sbjct: 443 DDVATFMAEYRAAENYVDPADRALMLDRLRTSGSFATMETHMRRRDGTTTWFLYSGTLDG 502 Query: 253 --VLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALL 310 ++G++ + M+ + A+ ++ + L+D+ L D ++ + L Sbjct: 503 DTIIGVANEISEMRAT-QEALRRSEERYRALFDNAADGLLLYEADGTLIDV-NETIARRL 560 Query: 311 AQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFT 370 ++ E + ER+ ++ S + + + Sbjct: 561 GESREAIVGRNVASIVEPEVLERVRPRLTEILETGHASFESVHRTAMGPVNVEVHARRIE 620 Query: 371 TMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPF 430 R ++ L+++L +A D LT + NR F A H Sbjct: 621 FEGRFVVLSSARDITERKNLEAALLREATTDPLTGVRNRRQFFVDANREFARALRHDSGL 680 Query: 431 SVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASL 490 +V+ +D+DHFK +ND +GHQAGD VL A +LRA DV GR+GGEEF +LP AS Sbjct: 681 AVLMLDIDHFKNVNDLYGHQAGDEVLRAFAACCVEALRAYDVFGRLGGEEFAALLPAASP 740 Query: 491 TEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLA 550 EA E AER+R ++ + + + + T ++ + S+GV+S D F+ + ADR LY A Sbjct: 741 EEAMETAERLRKRVERRSV-VYEGTALQCTVSVGVTSL-AAADLGFDDMLRRADRALYAA 798 Query: 551 KQAGRNRVFASD 562 K GRNR + Sbjct: 799 KDHGRNRSEMAP 810 >UniRef50_A1HS81 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HS81_9FIRM Length = 553 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 6/188 (3%) Query: 377 WYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVD 436 + V+ ++ L+ + D+LT +YNR +K + + FS++ +D Sbjct: 371 YLHYATDVTRYKKMEEELRQLSVTDSLTNVYNRRYFVQKLEEEIERAKRAGSKFSLVMLD 430 Query: 437 LDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEV 496 +D FK+INDRFGH AGD VL A +I + +R D R GGEEF ++LP ++ +A + Sbjct: 431 IDRFKSINDRFGHNAGDLVLKSMAEMIKNRIRKIDTLARWGGEEFVMLLPETTVNKAVVL 490 Query: 497 AERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRN 556 E +R L++ ++ R++AS GV + L D +Y AK AGRN Sbjct: 491 VEELRESLSQMDIP----GVGRVTASFGVVGYCPG--DTIDTLMQRVDALMYEAKAAGRN 544 Query: 557 RVFASDNA 564 V SD Sbjct: 545 CVRYSDKC 552 >UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q4KDW8_PSEF5 Length = 315 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 78/285 (27%), Positives = 128/285 (44%), Gaps = 20/285 (7%) Query: 281 LYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGV 340 +++ + D +F E + + G + + L HF+ Sbjct: 39 FMENRSGVPSKQAIDQSFFELFPEVERPWFTRKVGRVVALGTPAFTIWKQRPYLVHFNNY 98 Query: 341 LVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSN-------MYVLQSS 393 + + G + TLL + + ++ +++ + Sbjct: 99 --------QPITGQGEFMYQNTTLLPLRSSNSEIHHVCLVIYDLTDVAINSLALQKANQQ 150 Query: 394 LQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 453 LQ + D LT+LYNRG ++ + H +++ +D+DHFK+INDR GHQAGD Sbjct: 151 LQHLSRTDHLTQLYNRGHWEQRLQFEYS---RHGSSIALLMLDIDHFKSINDRHGHQAGD 207 Query: 454 RVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK 513 V+ + LI +R DVAGR GGEEF ++LP L A +AER+R + E+E++ Sbjct: 208 AVIKRVSELIHQHVRDSDVAGRYGGEEFAILLPHTDLAGARTLAERLRQSVEEQEVIH-N 266 Query: 514 STTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 I + SLG++ + D L AD+ LY +K+AGRNRV Sbjct: 267 GQAIAFTISLGIACLDRPA-RDHRCLIEWADQALYASKRAGRNRV 310 >UniRef50_B2A6L1 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6L1_NATTJ Length = 340 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 73/280 (26%), Positives = 116/280 (41%), Gaps = 27/280 (9%) Query: 304 PRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIAL- 362 +L L+ + GI + R + ++V S + F + +I Sbjct: 54 YTDLDLILLDIMMPDIDGIEVCKRINDSSHVSDIPVIIVTALNDSGFLERAFQAGAIDFI 113 Query: 363 ---------------TLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLY 407 + + M ++ + + + + + A D LT+L Sbjct: 114 TKPVKRLELLARVGSAIKLSKEKRMRIVREQELEKTLKLLEETNKKFEKLATIDELTQLA 173 Query: 408 NRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLIS-SS 466 NR E R + + + S+I +D+D+FK ND +GHQAGD L A + Sbjct: 174 NRRLFDETMRGEWRRANRNGYNLSIILLDIDYFKNFNDAYGHQAGDECLKAIAKKLKFLM 233 Query: 467 LRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIR-ISASLGV 525 +R D A R GGEEF VILP L A VAE+IR + E ++ S + ++ SLGV Sbjct: 234 MRPGDFAARYGGEEFAVILPETDLRGAHSVAEKIRQGIEELKIPHCDSKVAQYVTVSLGV 293 Query: 526 SSS---------EETGDYDFEQLQSLADRRLYLAKQAGRN 556 +S+ ++ D + + L AD LY AK GRN Sbjct: 294 ASADLKNCQGGRDQATDDEIKILIEHADEALYKAKDNGRN 333 >UniRef50_Q0A8G7 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8G7_ALHEH Length = 237 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 73/214 (34%), Positives = 107/214 (50%), Gaps = 8/214 (3%) Query: 347 LSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRL 406 + R D I++ +T A + + LI + R ++ Q +++ A D LT + Sbjct: 23 ETRHRRKDGSDITVEITTNAAYYKGVKLI--FCNCRDITERKRDQERIRYLATTDALTGI 80 Query: 407 YNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSS 466 NRG + P +V+ DLDHFK +ND +GH AGD VL A ++++ Sbjct: 81 MNRGEFTRHLTKEIERAARFNRPVAVVMYDLDHFKRVNDTYGHDAGDEVLKTAVAQVNNA 140 Query: 467 LRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVS 526 +R DV R GGEEF ++LP L A + AER+R + E + R++AS GV+ Sbjct: 141 IRRVDVHARWGGEEFILLLPETDLAAAVKSAERLRAAIAEHPFKQPE----RVTASFGVT 196 Query: 527 SSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + F+ L AD LYLAK AGRNRV A Sbjct: 197 TLGPRDR--FDVLIKRADDALYLAKHAGRNRVEA 228 >UniRef50_C1F117 Sensory box-containing diguanylate cyclase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F117_ACIC5 Length = 627 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 119/317 (37%), Gaps = 28/317 (8%) Query: 260 VRTMQQFLRNAID----KNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPREL-ALLAQAM 314 R + ++ D +L G S + L +P G + + + A+ Sbjct: 310 ERRFRSLAESSPDVMVLTDLAGRRLYVSSAAKTLLGWSPKELLGKTYQSNIVHSDDVPAL 369 Query: 315 EHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLL 374 E R R H DG + V R I Sbjct: 370 EEALSDVRRTGEGRTLTYRCQHKDGSYLWVEASLMLYRDMQSHDPI-------------- 415 Query: 375 ISWYVIRRMVSNMYVLQS-------SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQ 427 + + R +++ + LQ A D LT + NR + K Sbjct: 416 -GFVNVVRDITSRKAAEERMQTAYLELQALAEIDALTGVANRRHFDKVLDAEWKRAIRTG 474 Query: 428 HPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILP 486 P +++ +D+D FK ND +GH GD L A IS + R+ D+ R GGEEF +ILP Sbjct: 475 APTALLLIDVDWFKNYNDIYGHLEGDVCLRSIATWISVCIHRSTDLVARFGGEEFALILP 534 Query: 487 GASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRR 546 AA + ERIR ++ ++++ + I+ S G +S L AD+ Sbjct: 535 DTDEAGAAALGERIREEIEARKVVHRGNEYGHITISAGCASLMPMRGTSGTLLIDAADKA 594 Query: 547 LYLAKQAGRNRVFASDN 563 LY AK +GRNRV + + Sbjct: 595 LYRAKSSGRNRVMRASD 611 >UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A6W8_ALHEH Length = 382 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 94/341 (27%), Positives = 135/341 (39%), Gaps = 26/341 (7%) Query: 222 RWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQL 281 F E +V + + +W G +++P ++ L I L G +L Sbjct: 63 YAFMPIGEFTLMALLRVACTAVLLGLFFWCGREQLTLPQARLRLGLLITIPLLLYGAARL 122 Query: 282 YDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVL 341 N D G I +L AM +R E L + VL Sbjct: 123 L---------LNGDVAPGLILGYSFFPVLTVAMLTVFPLTLR--------EALGYLLPVL 165 Query: 342 VRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHD 401 + L V S+ L L + S M+ L QA D Sbjct: 166 LVYTLLEIAVGRTLDLQSLGGLWLLVLVALVAAWSVAGQLLMLL-------RLYRQATRD 218 Query: 402 TLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAG 461 LT L+NR AL E+ P +V+ DLD FK IND GH GDRVL A Sbjct: 219 PLTGLFNRRALTEQIERERARFLRTGRPLTVLLFDLDRFKRINDHHGHLVGDRVLQVFAN 278 Query: 462 LISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISA 521 ++ +LR D GR GGEEF LP + +A VAER+R + + +A+ ++ + Sbjct: 279 VVQQNLRTTDHFGRWGGEEFLAALPETTSEQARVVAERVRQACENERLTLAEGPSLGFTT 338 Query: 522 SLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASD 562 S+GV++ D + L + D LY AK GRNRV ++ Sbjct: 339 SIGVATL--HRDETLDSLFNRVDEALYNAKAYGRNRVVEAE 377 >UniRef50_Q6AJ00 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ00_DESPS Length = 571 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 86/338 (25%), Positives = 146/338 (43%), Gaps = 25/338 (7%) Query: 236 PQVTVSVPVDSNNYWYGVLGMSIPVRTMQ----------QFLRNAIDKNLDGEYQLYDSK 285 V +D N+ G++ ++ + + L + +L G L + Sbjct: 242 WARVVGKAIDQNDLNRGIIWIAEDITEQRTTQKELQLAYNELEAIFNNSLVGILLLGQN- 300 Query: 286 LRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVL-VRV 344 R + N T +D L LL + +E I + + H++ + V Sbjct: 301 -RKIHRVNKRLATILGYDEP-LELLGKGVEK-----IHLSEKNFKEFGEKHYNSLKQRDV 353 Query: 345 HTLSEGVRGDFGSISIALTLLWALFTTM---LLISWYVIRRMVSNMYVLQSSLQWQAWHD 401 + ++ GS + AL + L + + + L A D Sbjct: 354 FQIDYQLKRKDGSPAWVTLSGQALDSADPPDLDKGVLWMMDDATKRKKAEEKLVRIAATD 413 Query: 402 TLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAG 461 +LT+L NR F L + P SV+ +D+DHFK +ND GHQAGD+VL + Sbjct: 414 SLTKLNNRRHFFSLGHEELALHLHNAQPLSVLMLDIDHFKNVNDTLGHQAGDKVLKIFSK 473 Query: 462 LISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISA 521 + + +LR+ D+ GR+GGEEF VIL ++A AERIRL + K + +I+ Sbjct: 474 ICAVNLRSVDIIGRIGGEEFAVILTNTPRSQAQRTAERIRLAIETSP-EFTKQSLPKITV 532 Query: 522 SLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 S+G+++++ + + + AD+ LY AK GRNR+ Sbjct: 533 SIGIATNQP--PENLDAIICRADKNLYQAKSNGRNRIE 568 >UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VVS2_9CYAN Length = 314 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 78/290 (26%), Positives = 122/290 (42%), Gaps = 12/290 (4%) Query: 278 EYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHF 337 L + + SN + + L+ A+ G+ + S L Sbjct: 25 HVILEAEGYKTIVVSNGQDAIERVHLDKP-DLIIMALTMPKMSGLELCDYLKSPPPLTTS 83 Query: 338 DGVLVRVHTLSEGVRGDFGS---------ISIALTLLWALFTTMLLISWYVIRRMVSNMY 388 +L+R E + F + A L L + + R+V Sbjct: 84 PIILMRTVREQEYLIEAFEKGAADTITHPFNPAEILARVRTHLELKQTQKQLNRLVKEHE 143 Query: 389 VLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 L + L+ A D LT L+NR A ++ S++ +D+DHFK IND +G Sbjct: 144 KLANLLRKLAITDPLTGLWNRRHFLTVAYQEFNRASRYKRFMSILMIDIDHFKQINDEYG 203 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H GD VL A I SLR D GR GGEEF +LP + A VAER+R ++ + Sbjct: 204 HTMGDEVLKGVAKSIVGSLREADYCGRFGGEEFVTLLPETDSSGAVRVAERLRKRMEQIT 263 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 558 + I ++++ ++GV+S + D + E + A++ LY AK G NRV Sbjct: 264 IGIGD-KQVQMTVTVGVASYQLD-DANIEVIIQRANKALYHAKSQGYNRV 311 >UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QU32_CHLT3 Length = 606 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 96/195 (49%), Gaps = 3/195 (1%) Query: 366 WALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQT 425 + T L + + ++ + +L+ +D LT L NR E+ + + Sbjct: 415 LEVTTLALKEANAENQLLLERLREQAETLERLVTYDGLTGLANRRHFDEQFEYEFRRTRR 474 Query: 426 HQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVIL 485 ++ P S+ D+D FK +ND F HQ GD VL A + ++RA D+ R GGEEF I Sbjct: 475 YKRPLSIAMSDIDFFKKVNDNFSHQVGDEVLKKVASIFRENVRAGDLVARYGGEEFVFIF 534 Query: 486 PGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADR 545 + A AE+IR + + + ++++ S+GV+ + G ++L + AD Sbjct: 535 TETNKESAIRAAEKIRKAIEDYDWSNV-HAGLKVTISIGVAE--DAGFDGCDELIAAADS 591 Query: 546 RLYLAKQAGRNRVFA 560 +LY AK+ GRN+V A Sbjct: 592 KLYEAKRNGRNQVRA 606 >UniRef50_D1U9G5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9G5_9DELT Length = 840 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 84/329 (25%), Positives = 132/329 (40%), Gaps = 18/329 (5%) Query: 247 NNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRE 306 + WY V + R + + L S + D +G + Sbjct: 516 DGKWYAVGIL----RDITKKLEARRKLESYARRIALASDAGGVGVWEWDIASGTLTWDIR 571 Query: 307 LALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDF-------GSIS 359 + L + G + + V E L L +V T +F G Sbjct: 572 MHELYAVKPGEFSGLYQAWTSRVHPEDLAGAKDSLDKVQTEGGSWNHEFRILLPEGGVRY 631 Query: 360 IALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPL 419 I + + + S I + ++ + + L A D+LT L++RG E Sbjct: 632 IRAAARAHMDNSSKVASIIGINQDITEQRLAEQELVRLATKDSLTGLFSRGHFMELGTRA 691 Query: 420 AKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGE 479 + + + P SV+ D D FKA+ND GH GD VL + +LR DV GR+GGE Sbjct: 692 VEHARRYGEPLSVVMFDADRFKAVNDTHGHDVGDMVLKAIGRAAARTLRDVDVLGRIGGE 751 Query: 480 EFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDF--- 536 EF +LP + +A VAER+R ++ + + T + ++ SLGV + D D Sbjct: 752 EFAAVLPQTTREQALLVAERVRAEIAASRIEVDADTVLSVTVSLGVCVMDTAPDTDPGTA 811 Query: 537 ----EQLQSLADRRLYLAKQAGRNRVFAS 561 ++L AD LY AKQ GRNR ++ Sbjct: 812 TASLDKLLKGADTALYKAKQNGRNRTESA 840 >UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WIR5_CHLAA Length = 589 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 82/312 (26%), Positives = 115/312 (36%), Gaps = 20/312 (6%) Query: 267 LRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDS 326 L +L + + + + A G Sbjct: 268 LEQLYQVIYRATTRLVSHQRFVIAIPTENRMVEYVHIVTPTGRQAPQQVPLHCGLAGYVL 327 Query: 327 RYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSN 386 R+ RL + L + G+ S+ L + + + Sbjct: 328 RFGVSLRLSGAQALPEPAVQLLPEIEGELADGSLLAAPLIVGDRIIGALLVWSNHHDAYT 387 Query: 387 MYVLQS-------------------SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQ 427 M L + +Q QA D LT L NR + + + + Sbjct: 388 MADLNALELLAATVAVALHNAFRFAQIQSQAITDNLTGLANRRHFLQVLHQEMERNRRYH 447 Query: 428 HPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPG 487 P S+ +D+DHFK IND FGH AGD VL A LR DV R GGEEF +ILP Sbjct: 448 TPVSIAMIDVDHFKQINDTFGHIAGDYVLREIARRCRQQLRDVDVLARYGGEEFGLILPE 507 Query: 488 ASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRL 547 + +A + ER+R L ++I I + S+GV+S T D L + ADR L Sbjct: 508 TTYEQALKATERLRTVLATTPIMI-DGRQINPTISIGVASFHPTVYPDPSSLIADADRAL 566 Query: 548 YLAKQAGRNRVF 559 YLAKQ GRNRV Sbjct: 567 YLAKQQGRNRVC 578 >UniRef50_B4VK28 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VK28_9CYAN Length = 331 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 66/179 (36%), Positives = 93/179 (51%), Gaps = 2/179 (1%) Query: 383 MVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKA 442 + + + + LQ D LT++ NR A + + K Q P S+I D+D FKA Sbjct: 147 LKAKLEEMNQELQRLVDLDGLTQIANRRAFDQALQQEWKRLAREQAPLSLILCDIDFFKA 206 Query: 443 INDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLTEAAEVAERIR 501 ND +GHQAGD L A ++ + R DV R GGEEF VILP SL A +VAE IR Sbjct: 207 YNDTYGHQAGDECLKQVADILRKAAKRPADVVARYGGEEFVVILPNTSLRGAMQVAESIR 266 Query: 502 LKLNEKEMLIAKSTTIR-ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 KL + ++ S + ++ S GV+ ++L + AD+ LY AK GR+RV Sbjct: 267 SKLKSRAIVHEGSGVSKFVTLSCGVAGVIPPPKTTPDRLIAEADQALYKAKVEGRDRVV 325 >UniRef50_B3PKF1 Response regulator n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKF1_CELJU Length = 514 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 73/313 (23%), Positives = 125/313 (39%), Gaps = 6/313 (1%) Query: 250 WYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELAL 309 + G + M+ L + + + + + Sbjct: 76 FSGRADLRATSSVMKILLVEDSATLRHAMRNYIIEAGHEPLIARSGEEALQMLENTPVDM 135 Query: 310 LAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDF---GSISIALTLLW 366 + +E G +R + H+ ++ + + G + + Sbjct: 136 IIMDVEMPGLNGFET-TRLIREWLGGHWIPIIFVTGLNEDESYREGIEAGGDDYLIKPVS 194 Query: 367 ALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTH 426 + + + I M + L + L+ + D+LT++YNR + A L + H Sbjct: 195 FMIIKAKIRAMERIAEMRDQLNQLNTELEALSQLDSLTQIYNRRTFNDLAEQQWALAKRH 254 Query: 427 QHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVIL 485 Q P S + +D+DHFK ND +GH AGD L + I S L R+ D+ GR GGEEF V+L Sbjct: 255 QLPISALMIDVDHFKLFNDHYGHPAGDSCLKKISQAIKSCLHRSADLFGRYGGEEFIVLL 314 Query: 486 PGASLTEAAEVAERIRLKLNEKEMLIAKSTTIR-ISASLGVSSSEETGDYDFEQLQSLAD 544 P A VA+ I + + S + ++AS+G ++ T + E+L AD Sbjct: 315 PETDTQGALHVAQSINQAIEALNLRHDVSPSSHLVTASIGGATCVRTTGHSLEELIKSAD 374 Query: 545 RRLYLAKQAGRNR 557 R LY K++GRNR Sbjct: 375 RALYKVKRSGRNR 387 >UniRef50_Q1K485 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K485_DESAC Length = 370 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 80/320 (25%), Positives = 126/320 (39%), Gaps = 27/320 (8%) Query: 267 LRNAIDKNLDGEYQLYDSKLRFL------TSSNPDHPTGNIFDPRELALLAQAMEHDTRG 320 L N + + + D L P + E + + +E Sbjct: 48 LENYRPALIISDVVMPDMDGFELCRQIKGHVETRHVPVVLLTRLSEPEDIVRGLECGADH 107 Query: 321 GIR---MDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISW 377 + S VS + + +GV F + + +LL ++ Sbjct: 108 FVTKPFDCSLLVSQVHNILLNQKIRSQQRNDDGVEIYFAGKKHVINSERSQILDLLLSTY 167 Query: 378 YVIRRMVSNMYVLQSSL--------------QWQAWHDTLTRLYNRGALFEKARPLAKLC 423 + + + L A D+LT +NRG E + Sbjct: 168 EGALQQKRELERMNEQLNEALDTIKKRNAEIAELAVRDSLTGSFNRGYFNETFPGAIRRA 227 Query: 424 QTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQ-DVAGRVGGEEFC 482 Q +Q S+I D+DHFK IND +GHQ GDRV+ A ++ SLR D R GGEEF Sbjct: 228 QRYQQSLSLIMCDIDHFKLINDHYGHQTGDRVIKSVAQGLAQSLRQGVDWLARYGGEEFV 287 Query: 483 VILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDY--DFEQLQ 540 ++LP +L A VAER+R + ++E+ +IR++AS GV+ + + Sbjct: 288 IVLPETNLEGALVVAERMRRSIADQEIAC-DPQSIRLTASFGVAGCDPEHASMLTGNGMI 346 Query: 541 SLADRRLYLAKQAGRNRVFA 560 + ADR LY AK+ GRN + Sbjct: 347 AAADRCLYQAKKEGRNCCCS 366 >UniRef50_C5S6P4 Diguanylate cyclase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S6P4_CHRVI Length = 529 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 88/379 (23%), Positives = 140/379 (36%), Gaps = 46/379 (12%) Query: 231 ASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLT 290 V + VPV VL + Q+ L + + + DS+ ++ Sbjct: 152 ERTGLYMVALGVPVQRAGTIVAVLASGMTTEPFQRLLNDQYFPD-GWTVTVLDSRGVIVS 210 Query: 291 SSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYV--SWERLDHFDGVLVRVHTLS 348 S+ P R L ++ + D V S + + + S Sbjct: 211 RSHTPEPFIGTMAQRPLLDFIRSGRQGSLDTRTNDGTPVIASIVQSPLYGWTVAVGAPKS 270 Query: 349 EGVRGDFGSISIALTLLWALFTTMLLISWYVIRRM---VSNMYVLQSSL----------- 394 + S + + F L + + R + + ++ + SL Sbjct: 271 LMMNDVLNSAFWIVGTIVLAFVLGLFFALRLTRGILCSIRHLDIAARSLLAGRPIELPVI 330 Query: 395 ----------------------QWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSV 432 + +A HD LT L NR E+ R Q H P ++ Sbjct: 331 PFREVESIGEALLEAERGFISIRHRADHDGLTGLANRRCFDERLRAEWPHAQRHHQPLAL 390 Query: 433 IQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLT 491 + +D+DHFKA NDR GH AGD L A + + + R D+ R GGEEF +LP L Sbjct: 391 LMIDIDHFKAYNDRLGHLAGDVCLKRIAATLQTHMRRPYDIVARYGGEEFVCLLPECDLG 450 Query: 492 EAAEVAERIRLKLNEKEMLIAKSTTIRI-SASLGVSSSEETGDYDFEQLQSLADRRLYLA 550 A E AE +R + E + T I + S+GV+ + E +AD+ LY A Sbjct: 451 GALERAESMRAAVEELAIPHPDPGTAGIMTLSIGVTVINASPSNTPEAALRMADQFLYRA 510 Query: 551 KQAGRNRV-----FASDNA 564 K AGRN++ +D+A Sbjct: 511 KHAGRNQIRGGWFVDADSA 529 >UniRef50_B9ZM04 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZM04_9GAMM Length = 291 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 10/221 (4%) Query: 353 GDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGAL 412 G + SI L + L + S ++ + L+ ++ D LT L+NR + Sbjct: 63 GLYHSIPDLLVPIIFLLGGSFVCSVVLLTYSSVESIRRITRLEHESITDPLTGLFNRRHM 122 Query: 413 FEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDV 472 + + + P SV+ +D+D FK INDR GH AGD +L A + +LR D+ Sbjct: 123 DRRLDEEVARSRRYGQPLSVVMLDIDEFKGINDRLGHLAGDYILESIAQRLRQNLRRVDL 182 Query: 473 AGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIR--------ISASLG 524 A R GGEEF VI P A ++AE++R ++ + +++ + ++ S+G Sbjct: 183 AARFGGEEFVVIAPHTDQDAALQLAEKLRSEIAQTPIILKGHEHVPPCAPDELYVTVSVG 242 Query: 525 VSSS--EETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 V+S E + + L AD LY AK GRNR + + Sbjct: 243 VASLNIEPDSRDNADFLLQRADDALYRAKAGGRNRCESGPS 283 >UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors n=2 Tax=Synechococcus elongatus RepID=Q31K54_SYNE7 Length = 1099 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 79/329 (24%), Positives = 128/329 (38%), Gaps = 22/329 (6%) Query: 246 SNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRF-----LTSSNPDHPTGN 300 N++ ++ + + FL N G+ L + + T Sbjct: 750 LNDFLQACSTVAEAGQVIAGFLPQLFP-NCRGQLSLLQRDGKLEMLQAIVEWGQPVHTQP 808 Query: 301 IFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI 360 F + L + + D V H G + ++ FG I Sbjct: 809 SFLLSDCWALRRGTPYL------YDPDQVLSPACPHVKGKISSGESIFCLPLAAFGEILG 862 Query: 361 ALTLLWALF---------TTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGA 411 L + L + + L+ +L+ + D LT L+NR Sbjct: 863 HLQFEQMVTHDNSCVDSKAPPLAETIAEQLALAIANLQLRETLRQENLRDPLTGLFNRRY 922 Query: 412 LFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQD 471 L E + ++ +D+D+FK ND FGH AGD VL A + + +RA D Sbjct: 923 LQEFFEQELARAKRSGDSIGILMLDIDYFKRFNDEFGHDAGDMVLKQVARALLNQVRASD 982 Query: 472 VAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEET 531 V R GGEE +++PGASL +A A++IR + + + + T ++ S+GV++ E+ Sbjct: 983 VVCRFGGEEIAILMPGASLEVSARKADQIRQAIAQLIISYHEQTLPSLTISIGVAAFPES 1042 Query: 532 GDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 G + L AD LY AK AGRN V Sbjct: 1043 GLAS-DTLIKSADTSLYQAKAAGRNCVVV 1070 >UniRef50_Q2P4J7 Sensor histidine kinase n=16 Tax=Xanthomonas RepID=Q2P4J7_XANOM Length = 569 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 99/523 (18%), Positives = 180/523 (34%), Gaps = 28/523 (5%) Query: 47 VLEDAYISSQRNHLENVANALDKHL---QYNVDKLIFLRNGMREALVAPLDFTSLRDAVT 103 ++ + ++ + D +L Q +V++L L + +R +V + +T Sbjct: 55 EIQARVLDAESAQRGFLLTGNDAYLLDYQTSVERLPILLDKLRRLIVNN---PAQEQHLT 111 Query: 104 EFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRL 163 + ++ + +++ + G+ A R ++ + ++ L Sbjct: 112 QLQRLVETRLRQLQ-HVLDVYAQGGLEPARADIRQSAFRTTSAIREQALTMVQREQELLA 170 Query: 164 AHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRW 223 SS + ++ + + + + + NR Sbjct: 171 QRAESSGQSAHLLLALGLAGIPFGLMVVGMVYALLMRELRHRAQAEQLAAQANRELGESI 230 Query: 224 FTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYD 283 Q A +++ + + + L + + Y L Sbjct: 231 DALQRSTAD-------LNLLSRYTGLLQSCISAEEALMVSSRTLASLLPGVAGSVYLLRA 283 Query: 284 --SKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVL 341 + ++ LL + RG + H D + Sbjct: 284 SQDRAEAISHWGEPLVCS------APHLLPEQCWALRRGQPHIIEYLGRDALCAHIDELP 337 Query: 342 VRVHTLS-----EGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQW 396 + G + ++ + + + + + L+ SL+ Sbjct: 338 SDASVTTACLPMSAQGTQLGFLFLSAAGPGPMPRLEIAEAAAEQLSLALSNLRLRESLRR 397 Query: 397 QAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVL 456 Q+ D LT LYNR L E C P SV+ +D+DHFK ND GH GD +L Sbjct: 398 QSIRDALTGLYNRRYLEESLSHELARCARRGLPLSVLMLDVDHFKQFNDSQGHAGGDLLL 457 Query: 457 SHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTT 516 + L+ + LR +DVA R GGEEF V+LP A EA VAE+IR + + Sbjct: 458 AAVGELLLTRLRTEDVACRYGGEEFTVLLPEADGEEALRVAEQIRGYIAALAVSDEARAL 517 Query: 517 IRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVF 559 +++AS+GV+S G+ L AD LY AK GRNRV Sbjct: 518 PKVTASIGVASFPADGEQGA-SLIQKADAALYRAKHRGRNRVE 559 >UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21R75_RHOFD Length = 498 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 67/192 (34%), Positives = 96/192 (50%), Gaps = 1/192 (0%) Query: 373 LLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSV 432 LL + + + + LQ L+ QA D+LT LYNR L C+ P S+ Sbjct: 162 LLKANQSLVVNLQEIEALQQQLREQASRDSLTALYNRRYLDTTLDRELASCKREGKPLSL 221 Query: 433 IQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCVILPGASLT 491 I +D+D FK ND GHQAGD+ L A + +S RA D+A R GGEEF ++LPG T Sbjct: 222 IMIDVDDFKKYNDLHGHQAGDQCLIAVAKTLQASAKRASDLAARYGGEEFLLVLPGMDAT 281 Query: 492 EAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAK 551 A +AE +R + ++ +S ++ S+G++ D L AD LY AK Sbjct: 282 AAQGLAEELRRSVEALKIPHEQSRGGSVTISIGLAVMTNDSHKDVAGLLRAADEALYHAK 341 Query: 552 QAGRNRVFASDN 563 GRN+V + Sbjct: 342 HGGRNQVRLATQ 353 >UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479K2_DECAR Length = 721 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 72/231 (31%), Positives = 112/231 (48%), Gaps = 7/231 (3%) Query: 335 DHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFT-----TMLLISWYVIRRMVSNMYV 389 H +G ++ + + G L + + L + +R+ + + Sbjct: 487 PHKNGGVISSEVVGSFLLDQQGKPFALLGIARDISERRRSEAELRSANDKLRKQLEEIEK 546 Query: 390 LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 449 LQ +L+ QA D+LT +NR L E + +P S++ +DLDHFK IND +GH Sbjct: 547 LQVALREQAIRDSLTGCFNRRYLDETLERELSRSRREGYPLSLLILDLDHFKRINDTYGH 606 Query: 450 QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEM 509 AGD+ L A + + +R +DV R GGEEF +++P L AAE AE R K+ E + Sbjct: 607 MAGDQALIVLAETLRAGIRHEDVLCRYGGEEFVILMPRMPLAIAAERAELWRSKIAEIRV 666 Query: 510 LIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 + +AS GV++ + G ++L AD+ LY AK GRNRV Sbjct: 667 TFGN-FELSFTASAGVAAYPDHGKM-PDELTQAADQALYTAKNEGRNRVVV 715 >UniRef50_Q2RNX7 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RNX7_RHORT Length = 492 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 80/315 (25%), Positives = 126/315 (40%), Gaps = 9/315 (2%) Query: 254 LGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIF--DPRELALLA 311 + ++ + ++ L A +G L G I + AL Sbjct: 180 VALAEDLNAEREQLETARLDADEGRRFLQTLIATIPNPFFHQDLEGRIRGCNAAFAALHG 239 Query: 312 QAMEHDTRG-GIRMDSRYVSWERLDHFDGVLVR----VHTLSEGVRGDFGSISIALTLLW 366 + D G + + R + D L+ V + + + ++ Sbjct: 240 RDHRTDMFGLTVADLTDAAFSSRTERLDAELMAKGGNVSYEAVFADAEGRARTMIYNKAV 299 Query: 367 ALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTH 426 + + ++ ++ +L+ A D LT NR A E AR L Q H Sbjct: 300 LTDAAGQAVGLVAVITDITEQKRMEEALRRLATTDPLTGALNRRAFMEAARRDLALAQRH 359 Query: 427 QHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILP 486 P +V D+DHFK +ND+ GH GD L + +LRA DV GR+GGEEF +ILP Sbjct: 360 GEPVTVALADIDHFKRVNDQHGHATGDEALKTFVATVHGALRASDVLGRMGGEEFALILP 419 Query: 487 GASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRR 546 +L A +A+R+R L + + + S+G++ G + L AD Sbjct: 420 HTALASAMLLADRLRQTLANLRVPCPSGE-VEFTVSIGLAELGTHG-TTIDTLLQAADEA 477 Query: 547 LYLAKQAGRNRVFAS 561 LY AK AGRNRV A+ Sbjct: 478 LYRAKSAGRNRVIAA 492 >UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VQN9_VIBSL Length = 405 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 75/224 (33%), Positives = 115/224 (51%), Gaps = 6/224 (2%) Query: 340 VLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAW 399 ++ TL E DF S L + + +L + +++ L SL + Sbjct: 169 LVRIWITLKEPNIDDFLQASSIHQLAFIITAILLSTIGFTYNWLLNAR--LMQSLYSSSM 226 Query: 400 HDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHA 459 D+LT+LYNR A+ E R H HP SVI +D+DHFK +ND+ GHQ GD+VL Sbjct: 227 KDSLTQLYNRRAMNEMLRREWMRSVRHNHPLSVIILDIDHFKQVNDQHGHQTGDQVLKKI 286 Query: 460 AGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRI 519 ++ +LRA D+ R GGEEF ++LP + EA +VAE++R+ + E + + + + Sbjct: 287 GIILQHNLRAADIPFRYGGEEFLIVLPDTRIGEACKVAEKLRIIIEETKF--WRQQSANL 344 Query: 520 SASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 +AS G+S + + AD LY AK+ GRN V A + Sbjct: 345 TASFGLSEL--WAEDKVPSMIKRADEALYYAKENGRNTVCALTD 386 >UniRef50_C1A5L7 Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5L7_GEMAT Length = 491 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 93/460 (20%), Positives = 162/460 (35%), Gaps = 28/460 (6%) Query: 129 VSDALVSEGNLLSRENESL------DNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGF 182 ++ VS L R + L + + + V Sbjct: 32 PANGGVSCLEQLERRSPDLLLLDILMPDADGCQLLERIKSEDRWRDLPVLMLSAQPPEEA 91 Query: 183 YVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSV 242 V + + Y + R+ R + E A Q S Sbjct: 92 SVKSLGLGAADFIRKPYRPKELLARVQAQLRMGALLRSTRTALLRTEEALVRAQQDADSR 151 Query: 243 P--VDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGN 300 VD + G L ++ + + A++ + + + ++P+ Sbjct: 152 RKLVDILHEVTGDLSVNELFHLLVRRAARALNVSHCSVVLARPGDAHAVVVAAFENPSLQ 211 Query: 301 IFDP--RELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGV------- 351 + A+E + + +E + G+ ++ + Sbjct: 212 HLSVQLERYPEIRAALESGQPVLVEDLETHPLYEGVREVWGIEGIEVSIRSVIALPFSVD 271 Query: 352 RGDFGSISIALT----------LLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHD 401 RG +G + T L +A ++ +MV + + L+ A D Sbjct: 272 RGQYGVFLVRRTREQELFGPADLEFAQAVITAAVAVIQRAQMVESTMADNARLEQLAQTD 331 Query: 402 TLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAG 461 LT+L NR AL E+ + + +++ +DLDHFK +ND +GH GD VL Sbjct: 332 PLTQLLNRRALTERITAEMERALRYDSTLALLMIDLDHFKKVNDTYGHLVGDDVLRDVGQ 391 Query: 462 LISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAK-STTIRIS 520 L+ ++R D+ R GGEEF V+LP A AERIR+ + E + ++++ Sbjct: 392 LLGHTIRGSDITARYGGEEFLVLLPETDDAGAVAFAERIRVAMEEHPFARDSMAEPLKLT 451 Query: 521 ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 AS+GV+ + E L + AD LY AK GRNRV Sbjct: 452 ASIGVAVFPAARIENVEDLFARADAALYRAKAEGRNRVRM 491 >UniRef50_A1KC69 Conserved hypothetical membrane protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KC69_AZOSB Length = 503 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 90/383 (23%), Positives = 147/383 (38%), Gaps = 27/383 (7%) Query: 196 PTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNN-YWYGVL 254 P + + +Q ++ ++ + + S V +S ++++ GV+ Sbjct: 116 PAPPIDLSDRDY--VKAQIDDWNKGLFLGSPVTSRLS-GIQIVPISRRINNDGGRLIGVV 172 Query: 255 GMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLR-FLTSSNPDHPTGNIFDPRELALLAQA 313 +I + + N D L G ++ L + + L A Sbjct: 173 SGAIDPHYLHDLVSNGADGLLLGIFRRDGHALACLPHREECPDAPPQVKHMIDSDLEGGA 232 Query: 314 MEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFT--T 371 ++ + R +S L DG V L ++ + L+ AL Sbjct: 233 EAEISKVRLLGKGRGISV-YLPSRDGQFFVVADLPSKTLLASWHANLPVFLVIALGGNVA 291 Query: 372 MLLISWYVIRRMVSNMYVLQS-----------------SLQWQAWHDTLTRLYNRGALFE 414 +++I Y R++ L L A D LT NR A + Sbjct: 292 LMVIGLYAYRQVTRRRQALDELAATNRELEDRVRERTRELHRLAHTDVLTGARNRRAFMD 351 Query: 415 KARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAG 474 + L L H +V+ +D+D FK+INDR+GH GD VL A + S LR D+ Sbjct: 352 EGEALFALAHRHHRDLAVMVLDVDRFKSINDRYGHAGGDAVLRALATVPDSVLRTSDLFA 411 Query: 475 RVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDY 534 R GGEEF ++LP A EV +R+ E E+ +R + S+G+S D Sbjct: 412 RFGGEEFAIVLPETDCMGAMEVGQRLLAAFRECEVPH-DGQVLRFTVSIGLSVIGP-ADA 469 Query: 535 DFEQLQSLADRRLYLAKQAGRNR 557 E L AD LY AK++GR+R Sbjct: 470 SLEALLQRADLALYRAKESGRDR 492 >UniRef50_Q2SPL3 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPL3_HAHCH Length = 373 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 104/210 (49%), Gaps = 9/210 (4%) Query: 360 IALTLLWALFTTMLLISWYVIRRMVS---NMYVLQSSLQW---QAWHDTLTRLYNRGALF 413 + LT L+ + M LI ++ + S + L +L+ A D LT L R L Sbjct: 160 VLLTALFMVMAQMALIGGFISKLRASLRVKNHQLNEALEKISVMASTDELTGLCTRRELM 219 Query: 414 EKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVA 473 ++ C+ S+ +D+DHFK IND +GHQAGD VL A + S +R+ D Sbjct: 220 KQLSNEFSRCRRSSGALSLCLLDIDHFKRINDSYGHQAGDAVLKKVAQTMQSLVRSIDCL 279 Query: 474 GRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGD 533 GR GGEEF +ILP L A AER+R + + R++ SLG + EE Sbjct: 280 GRYGGEEFLLILPQTPLDGAFITAERLRRAVMDIPFPEVA-PEFRVTISLGAAELEEG-- 336 Query: 534 YDFEQLQSLADRRLYLAKQAGRNRVFASDN 563 E L S D+ LY AK AGRNRV +++ Sbjct: 337 EAMETLISRVDKALYAAKGAGRNRVVSAEQ 366 >UniRef50_D1U6K0 Diguanylate cyclase with PAS/PAC sensor and hemerythrin-like metal-binding domain n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U6K0_9DELT Length = 457 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 71/274 (25%), Positives = 117/274 (42%), Gaps = 18/274 (6%) Query: 287 RFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHT 346 L ++ + + D L + + + R Y +R H DG ++ V Sbjct: 52 SMLGYTSRELLSKKFQDITHPEDLEEDLVYVNRVLAGAIDTYQMEKRYFHRDGHIIDVLL 111 Query: 347 LSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRL 406 V+ G+ ++ + + ++ + L + D LT++ Sbjct: 112 SVSLVKESDGTPQFFISQI----------------QDITRRKQAEQELLLVSQQDPLTKV 155 Query: 407 YNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSS 466 NR E A + P +++ +D+DHFK IND+ GH GD VL A S + Sbjct: 156 ANRRFFMEHATRELTRGKRFHEPQAILIIDIDHFKTINDKHGHDVGDEVLKAMATACSKA 215 Query: 467 LRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVS 526 LR DV GR+GGEEF +L + + A VAER+R + + + I + S+G+ Sbjct: 216 LREVDVFGRIGGEEFAAMLLNTNDSVARIVAERVRESVERLSVNVG-GKEIPFTISIGLV 274 Query: 527 SSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 S G + +AD+ LY AK++GRNRV Sbjct: 275 SF-LGGSNTLDDRMKMADKALYRAKESGRNRVEV 307 >UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TG17_HELMI Length = 324 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 17/311 (5%) Query: 266 FLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMD 325 + +A D L + L +++ ++ D + L+ + GI + Sbjct: 5 IIDDAEDTRLYLQAVLASDGFEVYATASAQEALAHLQDRPSIDLILLDVIMPGIDGIELC 64 Query: 326 SRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTL-------LWALFTTMLLISWY 378 + S ++V T E + F + ++ + L A + L + Sbjct: 65 QQIKSDAAWRDVPVIMVTALTNIEDLDRAFAAGAMDYIMKPVKKRELLARIRSALALKTE 124 Query: 379 V---------IRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHP 429 + + R+ + + LQ + D LT L NR E K + P Sbjct: 125 MDRRKEREEELLRVTAELEEAVRKLQNLSSLDGLTGLANRRRFDEYLASEWKRAIRNGTP 184 Query: 430 FSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLR-AQDVAGRVGGEEFCVILPGA 488 S+I D+D FK ND +GH GD L A L+ +R + D+ R GGEEF VILP Sbjct: 185 ISLILFDIDWFKPYNDTYGHIQGDDCLKAIASLMPKVVRRSSDLVCRYGGEEFAVILPDT 244 Query: 489 SLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLY 548 S A VAE IR L+E + +S R++ S+GV+++ + + L AD LY Sbjct: 245 SQEGALAVAESIREALSEAGIEHRQSPLDRVTVSVGVATAYPSPSSEPVTLIGYADEALY 304 Query: 549 LAKQAGRNRVF 559 AK+ GRNR Sbjct: 305 EAKRQGRNRTV 315 >UniRef50_B0CDD6 Diguanylate cyclase (GGDEF domain) n=2 Tax=Bacteria RepID=B0CDD6_ACAM1 Length = 630 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 9/198 (4%) Query: 372 MLLISWYVIRRMVSNMYVLQSSLQWQ-------AWHDTLTRLYNRGALFEKARPLAKLCQ 424 L +++ + + ++ L+ + D LT ++NR + E + + Sbjct: 433 ALYDRNLQLQQEIEERHRAEAKLKQLNQQLQQLSRIDGLTSIHNRRSFDESLDKEWRRLR 492 Query: 425 THQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGRVGGEEFCV 483 Q P S+I D+DHFK ND +GHQAGD L A I S+ R D+ R GGEEF V Sbjct: 493 REQQPLSIILCDVDHFKQYNDTYGHQAGDTCLQEVALAIDKSVKRPADMVARYGGEEFVV 552 Query: 484 ILPGASLTEAAEVAERIRLKLNEKEMLI-AKSTTIRISASLGVSSSEETGDYDFEQLQSL 542 +LP L A +AE IR + + S + +++ SLGV++ + +L Sbjct: 553 LLPNTPLPGATHIAEMIRTAIEVLRIPHKTSSASDQVTLSLGVATVIPNTQQTYTELLEA 612 Query: 543 ADRRLYLAKQAGRNRVFA 560 AD LY AKQ GRNRV + Sbjct: 613 ADAALYRAKQQGRNRVIS 630 >UniRef50_Q1K456 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K456_DESAC Length = 403 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 70/233 (30%), Positives = 119/233 (51%), Gaps = 16/233 (6%) Query: 344 VHTLSEGVRGDFGSISIALTLLWAL-FTTMLLISWYVIRRMVSNMYVLQ----------- 391 + + ++ G + L+ + + T +I W+ + ++ ++ Sbjct: 165 AYEIKHRIKRSNGRFTWYLSRAFPIRDETGKIIKWFGTATDIDDIKKVEIKLAQAKKAAE 224 Query: 392 ---SSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFG 448 L+ A D +T L +R A E+A+ L ++ + +Q PFS + +D+DHFK +ND +G Sbjct: 225 EANQKLKELASTDVVTGLQSRRAFMEEAKSLFQIAERYQRPFSFLIIDIDHFKKVNDTYG 284 Query: 449 HQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE 508 H GD VL ++SS LRA D+ GR+GGEEF VILP AE+ ER+ K+ E Sbjct: 285 HLGGDVVLVELGKIMSSCLRATDILGRIGGEEFAVILPETGPDHTAELIERLLEKVRTTE 344 Query: 509 MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + I T + ++ S+GV++ + ++ + AD+ LY AK GRNR + Sbjct: 345 IRIDDDTLVSVTVSIGVATVPPLPIH-VGKVMAAADKALYQAKSDGRNRCCEA 396 >UniRef50_B8EJQ5 Diguanylate cyclase n=1 Tax=Methylocella silvestris BL2 RepID=B8EJQ5_METSB Length = 738 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 98/474 (20%), Positives = 160/474 (33%), Gaps = 36/474 (7%) Query: 106 EQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGY-LLRLA 164 +DE I L R GV +A+ L EV +L + Sbjct: 267 RNVQDEARGDINLLASRFSGETGVVEAVGRTLAGSPSVLPLLVGGSRHDREVAQAVLEVG 326 Query: 165 HNSSSMVEQAMYVSRAGFYVSTQPTLF-----TRNVPTRYYGYVTQPWFIGHSQRENRHR 219 +S + + P + T ++ I H + R Sbjct: 327 VKASGAKLGYILDLTGAIVAAFDPRDDSALQAPGDASTSHFSKANAGEPISHFALDPVER 386 Query: 220 AVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEY 279 ++ P +N+E + N + +R Q + DG Sbjct: 387 RPYFYAIYPIRLANSEVVGHAVLKKSLN-------VLEADLRAFDQ---PYFFVDPDGLI 436 Query: 280 QLYDSKLRFLTS-SNPD-----HPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWER 333 L + L P P + + T + + +V Sbjct: 437 VLTNQPALLLRQLWPPSSDRKSIPARQSPTVNIAPPSKREIVDATWINLGGERVFVRRRF 496 Query: 334 LDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRM------VSNM 387 + + LV ++E + I +TLL L + L + Sbjct: 497 ANDSEWSLVLTIPMAELFAN--RVLGIVITLLATLMALIYLFGKERSVYDSVQMDKRLKL 554 Query: 388 YVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRF 447 L SL++QA D LT L+NR + + P S++ D+DHFK IND Sbjct: 555 QELARSLEFQASTDPLTGLFNRMKFDQALAAEILRANRYNRPLSLVLFDIDHFKNINDLH 614 Query: 448 GHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEK 507 GHQ GD VL + + ++ +R DV R GGEEF +++P ++ A + AE +R + + Sbjct: 615 GHQVGDNVLVQLSRIAAAHIRGTDVLARWGGEEFVILVPESNGQMAYQTAENLRNAIGQA 674 Query: 508 EMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 ++ S GV+ + E L S AD +Y AK GRN+ S Sbjct: 675 VFE----KAGAVTCSFGVAEYVDG--DAAESLISRADAAMYRAKIKGRNQAELS 722 >UniRef50_A4C957 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C957_9GAMM Length = 639 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 85/282 (30%), Positives = 127/282 (45%), Gaps = 7/282 (2%) Query: 279 YQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFD 338 +L D K + L + N E LL + + E+ + + Sbjct: 362 IRLSDQKAKLLATLGDYEGAYNEKVASE-ELLTEYHSQEREDARSKYKVMFDTEQTELQN 420 Query: 339 GVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQA 398 +L + + + L+ +LF +L++ + R V L A Sbjct: 421 KLLQQSSLIDQLALEKAKQTEQMQKLVNSLFAAILILLSVFVYRQVKVSKRLN----RLA 476 Query: 399 WHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSH 458 D+LT+L NR F A+ + K Q Q P S+I D+DHFK IND +GH GD VL Sbjct: 477 NTDSLTQLANRRYTFHFAKIVFKEAQIEQKPLSIIIFDIDHFKRINDNYGHPFGDEVLMA 536 Query: 459 AAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIR 518 A + LR D+ GR+GGEEF V+L + +A E+AER+R + + A+ ++ Sbjct: 537 VADKAQAGLREPDLLGRIGGEEFMVVLKNTPINQAVEIAERMRELIAQLSFAAAQQQ-VK 595 Query: 519 ISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA 560 ++AS GV+ D DF L AD LY AK AGRN+V Sbjct: 596 VTASFGVAQFNVDVD-DFGSLFQHADEALYRAKNAGRNQVVC 636 >UniRef50_C5T8F5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8F5_ACIDE Length = 1152 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 87/393 (22%), Positives = 148/393 (37%), Gaps = 25/393 (6%) Query: 178 SRAGFYVSTQPTLFTRNVPTRYYGYVTQP-------WFIGHSQRENRHRAVRWFTSQPEH 230 S+ G + + + Y +V Q A+RWF+ + Sbjct: 765 SQDGLPLKGRSMQWIHRDTPAYEEFVRSDEEVRRSGSVYREYQLRVASGALRWFSLRGTL 824 Query: 231 ASNTEPQV-TVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFL 289 +P + +D+ +S + + +++ G + D+ + Sbjct: 825 LDPDQPAGNLIWTLMDTTERRQAEEALSSARAHLLEIIQHFP-----GGVLVQDAAGSAV 879 Query: 290 TSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSE 349 + P A + + ++R + R + + + + Sbjct: 880 VVN--QAMCDVFRLPSRAADVIGCSREALESLMPPEARPLQPSRNPSHNDAVAAEYEIVL 937 Query: 350 GVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNR 409 I + I + V+ + +L+ A D LT L NR Sbjct: 938 NDARTVRIQYIPIRK-----PQGEHQGRLWIAKDVTERRRHEQTLERLATTDALTGLANR 992 Query: 410 GALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLIS-SSLR 468 A + +I +DLDHFK +ND +GH AGD VL H A L+ LR Sbjct: 993 RAFMARLEEERMRPSMGGRGGMLIMLDLDHFKRVNDTWGHAAGDEVLVHLARLLRGDLLR 1052 Query: 469 AQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSS 528 A D+AGR+GGEEF V+LP + EA VAER+R L + ++ + T++++ SLGV+ Sbjct: 1053 ATDLAGRLGGEEFAVLLPDTTAEEALGVAERLRRALEQSKIHVGDGATLQVTMSLGVAPI 1112 Query: 529 EETGDYDFEQLQSLADRRLYLAKQAGRNRVFAS 561 + + AD LY AK GRN+V + Sbjct: 1113 TGDAL----AVLAHADIALYEAKNTGRNKVVLA 1141 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 49/301 (16%), Positives = 79/301 (26%), Gaps = 19/301 (6%) Query: 107 QHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAA-------LEVGY 159 Q RD+ A+ + R ++ V A L VG Sbjct: 50 QQRDQRAFAENQAQLRATQMSATMATQVETLVGGLEYLARSLAMTYEAEPKQYFPLAVGT 109 Query: 160 LLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHR 219 L S + Y S L + + F H R Sbjct: 110 ALSSFPKGSIAQIAIANAAGEIVYSSLDRALPPQAA---LVSIADREHFRAHVLRAEPR- 165 Query: 220 AVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEY 279 + S + V + PV + GV+ +SI + R Sbjct: 166 -LYISRPVLGRVS-GQWSVQFTYPVLHGEQFKGVVVLSIAPDYLSSHFREVF-TEGKDVA 222 Query: 280 QLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQ----AMEHDTRGGIRMDSRYVSWERLD 335 L S +L S+ ++ P E L + + I R +W+RL Sbjct: 223 LLVRSDGSYLARSHQQEAVLHLSVPPERDFLVHPEQVRGHYQAKAPIDGTERLYAWQRL- 281 Query: 336 HFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQ 395 H ++V V V + A T M + + I + Q L+ Sbjct: 282 HGYPLIVSVGLERARVLAATERSIRESRIRNAAGTVMTMAAALWIALLFVRQRQSQMRLE 341 Query: 396 W 396 Sbjct: 342 R 342 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.141 0.428 Lambda K H 0.267 0.0431 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,086,459,830 Number of Sequences: 3077464 Number of extensions: 159907383 Number of successful extensions: 507717 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 23299 Number of HSP's successfully gapped in prelim test: 2646 Number of HSP's that attempted gapping in prelim test: 438920 Number of HSP's gapped (non-prelim): 29822 length of query: 564 length of database: 1,040,396,356 effective HSP length: 134 effective length of query: 430 effective length of database: 628,016,180 effective search space: 270046957400 effective search space used: 270046957400 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 96 (41.5 bits)