Phyre 2 alignment of P0ADP9 with c3t1eE_

Return to main results | Retrieve Phyre Job Id

Job Description | P0ADP9
Confidence | 2.46% | Date | Thu Jan 5 11:21:31 GMT 2012
Rank | 56 | Aligned Residues | 21
% Identity | 24% | Template | c3t1eE_
PDB info | PDB header:hydrolase | Chain: E: PDB Molecule:hemagglutinin-neuraminidase; | PDBTitle: the structure of the newcastle disease virus hemagglutinin-2 neuraminidase (hn) ectodomain reveals a 4-helix bundle stalk
Resolution | 3.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | L | A | K | E | S | G | F | D | G | E | L | A | D | L | T | D | D | I | L | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | I | Y | K | Q | V | A | L | E | S | P | L | A | L | L | N | T | E | S | I | I
Template Known Secondary structure |  |  |  |  | G | G | G | G | T | T |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions