Phyre 2 Results for P0ADP9

Email | l.a.kelley@imperial.ac.uk
Description | P0ADP9
Date | Thu Jan 5 11:21:31 GMT 2012
Unique Job ID | de76755bb9aecb1b

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2ko6A_ |
|  | 100.0 | 99 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein yihd; PDBTitle: solution structure of protein sf3929 from shigella flexneri2 2a. northeast structural genomics consortium target3 sfr81/ontario center for structural proteomics target4 sf3929
2 | d2ibge1 |
|  | 29.6 | 40 | Fold:Hedgehog/DD-peptidase Superfamily:Hedgehog/DD-peptidase Family:Hedgehog (development protein), N-terminal signaling domain
3 | d1ufwa_ |
|  | 29.3 | 31 | Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD
4 | c3m1nB_ |
|  | 25.7 | 40 | PDB header:signaling protein Chain: B: PDB Molecule:sonic hedgehog protein; PDBTitle: crystal structure of human sonic hedgehog n-terminal domain
5 | d3d1ma1 |
|  | 24.7 | 40 | Fold:Hedgehog/DD-peptidase Superfamily:Hedgehog/DD-peptidase Family:Hedgehog (development protein), N-terminal signaling domain
6 | d1iasa_ |
|  | 15.6 | 19 | Fold:Protein kinase-like (PK-like) Superfamily:Protein kinase-like (PK-like) Family:Protein kinases, catalytic subunit
7 | c1dpuA_ |
|  | 13.9 | 22 | PDB header:dna binding protein Chain: A: PDB Molecule:replication protein a (rpa32) c-terminal domain; PDBTitle: solution structure of the c-terminal domain of human rpa322 complexed with ung2(73-88)
8 | d1dpua_ |
|  | 13.9 | 22 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:C-terminal domain of RPA32
9 | c2kxhB_ |
|  | 10.6 | 54 | PDB header:protein binding Chain: B: PDB Molecule:peptide of far upstream element-binding protein 1; PDBTitle: solution structure of the first two rrm domains of fir in the complex2 with fbp nbox peptide
10 | d2cpga_ |
|  | 10.1 | 35 | Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:CopG-like
11 | d2ayxa2 |
|  | 10.1 | 32 | Fold:Flavodoxin-like Superfamily:CheY-like Family:RcsC linker domain-like
12 | c1ygmA_ |
|  | 9.1 | 39 | PDB header:membrane protein Chain: A: PDB Molecule:hypothetical protein bsu31320; PDBTitle: nmr structure of mistic
13 | c2noxP_ |
|  | 8.6 | 22 | PDB header:oxidoreductase Chain: P: PDB Molecule:tryptophan 2,3-dioxygenase; PDBTitle: crystal structure of tryptophan 2,3-dioxygenase from ralstonia2 metallidurans
14 | d1bl0a2 |
|  | 7.9 | 31 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:AraC type transcriptional activator
15 | c3kzqE_ |
|  | 7.7 | 17 | PDB header:structural genomics, unknown function Chain: E: PDB Molecule:putative uncharacterized protein vp2116; PDBTitle: the crystal structure of the protein with unknown function from vibrio2 parahaemolyticus rimd 2210633
16 | c3db3A_ |
|  | 7.5 | 33 | PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase uhrf1; PDBTitle: crystal structure of the tandem tudor domains of the e3 ubiquitin-2 protein ligase uhrf1 in complex with trimethylated histone h3-k93 peptide
17 | d1r4wa_ |
|  | 7.3 | 22 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:DsbA-like
18 | d1kz7a2 |
|  | 7.2 | 44 | Fold:PH domain-like barrel Superfamily:PH domain-like Family:Pleckstrin-homology domain (PH domain)
19 | d1aopa4 |
|  | 6.9 | 18 | Fold:Nitrite and sulphite reductase 4Fe-4S domain-like Superfamily:Nitrite and sulphite reductase 4Fe-4S domain-like Family:Nitrite and sulphite reductase 4Fe-4S domain-like
20 | c2in3A_ |
|  | 6.9 | 25 | PDB header:isomerase Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a putative protein disulfide isomerase from2 nitrosomonas europaea
21 | c1yzxB_ |
| not modelled | 6.3 | 25 | PDB header:transferase Chain: B: PDB Molecule:glutathione s-transferase kappa 1; PDBTitle: crystal structure of human kappa class glutathione2 transferase
22 | c2nw7C_ |
| not modelled | 5.3 | 24 | PDB header:oxidoreductase Chain: C: PDB Molecule:tryptophan 2,3-dioxygenase; PDBTitle: crystal structure of tryptophan 2,3-dioxygenase (tdo) from2 xanthomonas campestris in complex with ferric heme.3 northeast structural genomics target xcr13
23 | c2htfA_ |
| not modelled | 5.2 | 50 | PDB header:transferase Chain: A: PDB Molecule:dna polymerase mu; PDBTitle: the solution structure of the brct domain from human2 polymerase reveals homology with the tdt brct domain
24 | d2ivya1 |
| not modelled | 5.1 | 21 | Fold:Ferredoxin-like Superfamily:TTP0101/SSO1404-like Family:TTP0101/SSO1404-like
25 | d1d5ya2 |
| not modelled | 5.1 | 24 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:AraC type transcriptional activator