Phyre 2 alignment of P0ADP9 with c2da7A_

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Job Description | P0ADP9
Confidence | 4.79% | Date | Thu Jan 5 11:21:31 GMT 2012
Rank | 27 | Aligned Residues | 38
% Identity | 16% | Template | c2da7A_
PDB info | PDB header:dna binding protein | Chain: A: PDB Molecule:zinc finger homeobox protein 1b; | PDBTitle: solution structure of the homeobox domain of zinc finger2 homeobox protein 1b (smad interacting protein 1)
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | C | K | R | L | N | E | V | I | E | L | L | Q | P | A | W | Q | K | E | P | D | L | N | L | L | Q | F | L | Q | K | L | A | K | E | S | G | F | D | G | E
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Template Sequence |  | I | N | P | Y | K | D | H | M | S | V | L | K | A | Y | Y | A | M | N | M | E | P | N | . | S | D | E | L | L | K | I | S | I | A | V | G | L | P | Q | E
Template Known Secondary structure |  |  |  | S | S | T |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  | . |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . |  | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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