BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (134 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P75988 Uncharacterized protein ycgX n=38 Tax=Enterobact...   281   5e-75
UniRef50_P77598 Uncharacterized protein ybcV n=41 Tax=root RepID...   123   2e-27
UniRef50_B5BHA0 Putative uncharacterized protein n=32 Tax=Entero...   111   7e-24
UniRef50_C4X7S8 Putative uncharacterized protein n=3 Tax=Klebsie...    97   1e-19
UniRef50_Q03NH8 Phage envelope protein n=3 Tax=Lactobacillales R...    44   0.001

>UniRef50_P75988 Uncharacterized protein ycgX n=38 Tax=Enterobacteriaceae
           RepID=YCGX_ECOLI
          Length = 134

 Score =  281 bits (719), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 134/134 (100%), Positives = 134/134 (100%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR
Sbjct: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
           NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT
Sbjct: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120

Query: 121 LLYIEDVENNKPLI 134
           LLYIEDVENNKPLI
Sbjct: 121 LLYIEDVENNKPLI 134


>UniRef50_P77598 Uncharacterized protein ybcV n=41 Tax=root RepID=YBCV_ECOLI
          Length = 136

 Score =  123 bits (309), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/129 (44%), Positives = 89/129 (68%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M QV +F+++F+QVRK+ N   FYSELK H ++HYIYYLATDNI I+  +D  +L++G +
Sbjct: 1   MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLK 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
            ++ V  ++N   I+ +       + TF++Y   LA AGVFRW+T+++ +KR YY  DN+
Sbjct: 61  KVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWITNIHEHKRYYYTFDNS 120

Query: 121 LLYIEDVEN 129
           LL+ E ++N
Sbjct: 121 LLFTESIQN 129


>UniRef50_B5BHA0 Putative uncharacterized protein n=32 Tax=Enterobacteriaceae
           RepID=B5BHA0_SALPK
          Length = 135

 Score =  111 bits (277), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 87/134 (64%), Gaps = 2/134 (1%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M+  ++    FE+VRK+ NF+ F  +L+++ IA+YIY++AT N++IITH    + ++  R
Sbjct: 1   MELQLMLNHFFERVRKDANFNTFLIDLEYNNIAYYIYFVATGNVKIITHAGHFISIKSNR 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
            L+KV++T N   IK  +  H  G+ ++ +YC+ LA AGVF+W+ ++N   R Y++ DN 
Sbjct: 61  KLIKVNSTPNTQLIKLTSAKHFSGEHSYEKYCTDLATAGVFKWIVELNQKTRQYWSKDNQ 120

Query: 121 LLYIE--DVENNKP 132
           LLYI+      NKP
Sbjct: 121 LLYIKMWSCRFNKP 134


>UniRef50_C4X7S8 Putative uncharacterized protein n=3 Tax=Klebsiella pneumoniae
           RepID=C4X7S8_KLEPN
          Length = 130

 Score = 97.4 bits (241), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 74/125 (59%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M+ +V     FEQ R + +++ F +EL+ H++++YIY+++T N+  +  +D V+ ++  R
Sbjct: 1   MELLVRLGHFFEQARSDADYATFANELRRHQVSYYIYFVSTGNMNFVMANDEVVSVKSAR 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
            LL+V    +    + A + H      F +YC  LA AGVF+W+ D+    R Y++ DNT
Sbjct: 61  GLLRVRAEASHCLTRAAVIRHFARAINFEQYCRDLASAGVFKWIVDLEEETRHYWSKDNT 120

Query: 121 LLYIE 125
           LLY E
Sbjct: 121 LLYKE 125


>UniRef50_Q03NH8 Phage envelope protein n=3 Tax=Lactobacillales RepID=Q03NH8_LACBA
          Length = 130

 Score = 44.3 bits (103), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 6/122 (4%)

Query: 12  EQVRKEQNFSWFYSELKHHR---IAHYIYYLATDNIRIITHDDTV-LLLRGTRNLLKVST 67
           + V+ E N   F   ++  R   +  Y Y +A    R    D  + L + G      V+ 
Sbjct: 10  QAVKSETNAGEFADLMRTFRELGVQRYDYLVADGRYRYYDADSHIDLQMNGVPQ--PVAA 67

Query: 68  TKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDV 127
           T N AKIK A L    G+  F  +C     AGV  W +D+     SYY  ++ +L  E +
Sbjct: 68  TSNAAKIKAAVLAAQAGQFDFTRFCQLAGEAGVPVWTSDLMSKTVSYYDHEHHVLLAEPI 127

Query: 128 EN 129
             
Sbjct: 128 PG 129


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P75988 Uncharacterized protein ycgX n=38 Tax=Enterobact...   197   1e-49
UniRef50_B5BHA0 Putative uncharacterized protein n=32 Tax=Entero...   185   5e-46
UniRef50_C4X7S8 Putative uncharacterized protein n=3 Tax=Klebsie...   183   1e-45
UniRef50_P77598 Uncharacterized protein ybcV n=41 Tax=root RepID...   169   3e-41
UniRef50_Q03NH8 Phage envelope protein n=3 Tax=Lactobacillales R...   149   3e-35

Sequences not found previously or not previously below threshold:

UniRef50_C7PJK0 Putative phage envelope protein n=1 Tax=Chitinop...    74   1e-12
UniRef50_C2FXP3 Possible bacteriophage envelope protein n=4 Tax=...    70   3e-11
UniRef50_A5FGM1 Phage envelope protein-like protein n=1 Tax=Flav...    69   4e-11
UniRef50_A0AG76 Complete genome n=16 Tax=Listeria RepID=A0AG76_L...    66   3e-10
UniRef50_A4VX93 Phage envelope protein n=7 Tax=Bacteria RepID=A4...    61   2e-08
UniRef50_A5IPS9 Phage envelope protein-like protein n=54 Tax=Sta...    60   3e-08
UniRef50_B9DJJ2 Putative uncharacterized protein n=1 Tax=Staphyl...    57   1e-07
UniRef50_B9DUH6 Putative uncharacterized protein n=1 Tax=Strepto...    57   2e-07
UniRef50_C6VM48 Putative uncharacterized protein n=3 Tax=Lactoba...    47   3e-04

>UniRef50_P75988 Uncharacterized protein ycgX n=38 Tax=Enterobacteriaceae
           RepID=YCGX_ECOLI
          Length = 134

 Score =  197 bits (500), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 134/134 (100%), Positives = 134/134 (100%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR
Sbjct: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
           NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT
Sbjct: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120

Query: 121 LLYIEDVENNKPLI 134
           LLYIEDVENNKPLI
Sbjct: 121 LLYIEDVENNKPLI 134


>UniRef50_B5BHA0 Putative uncharacterized protein n=32 Tax=Enterobacteriaceae
           RepID=B5BHA0_SALPK
          Length = 135

 Score =  185 bits (469), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 53/134 (39%), Positives = 87/134 (64%), Gaps = 2/134 (1%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M+  ++    FE+VRK+ NF+ F  +L+++ IA+YIY++AT N++IITH    + ++  R
Sbjct: 1   MELQLMLNHFFERVRKDANFNTFLIDLEYNNIAYYIYFVATGNVKIITHAGHFISIKSNR 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
            L+KV++T N   IK  +  H  G+ ++ +YC+ LA AGVF+W+ ++N   R Y++ DN 
Sbjct: 61  KLIKVNSTPNTQLIKLTSAKHFSGEHSYEKYCTDLATAGVFKWIVELNQKTRQYWSKDNQ 120

Query: 121 LLYIE--DVENNKP 132
           LLYI+      NKP
Sbjct: 121 LLYIKMWSCRFNKP 134


>UniRef50_C4X7S8 Putative uncharacterized protein n=3 Tax=Klebsiella pneumoniae
           RepID=C4X7S8_KLEPN
          Length = 130

 Score =  183 bits (464), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 43/125 (34%), Positives = 74/125 (59%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M+ +V     FEQ R + +++ F +EL+ H++++YIY+++T N+  +  +D V+ ++  R
Sbjct: 1   MELLVRLGHFFEQARSDADYATFANELRRHQVSYYIYFVSTGNMNFVMANDEVVSVKSAR 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
            LL+V    +    + A + H      F +YC  LA AGVF+W+ D+    R Y++ DNT
Sbjct: 61  GLLRVRAEASHCLTRAAVIRHFARAINFEQYCRDLASAGVFKWIVDLEEETRHYWSKDNT 120

Query: 121 LLYIE 125
           LLY E
Sbjct: 121 LLYKE 125


>UniRef50_P77598 Uncharacterized protein ybcV n=41 Tax=root RepID=YBCV_ECOLI
          Length = 136

 Score =  169 bits (427), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 57/129 (44%), Positives = 89/129 (68%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M QV +F+++F+QVRK+ N   FYSELK H ++HYIYYLATDNI I+  +D  +L++G +
Sbjct: 1   MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLK 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
            ++ V  ++N   I+ +       + TF++Y   LA AGVFRW+T+++ +KR YY  DN+
Sbjct: 61  KVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWITNIHEHKRYYYTFDNS 120

Query: 121 LLYIEDVEN 129
           LL+ E ++N
Sbjct: 121 LLFTESIQN 129


>UniRef50_Q03NH8 Phage envelope protein n=3 Tax=Lactobacillales RepID=Q03NH8_LACBA
          Length = 130

 Score =  149 bits (375), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 6/122 (4%)

Query: 12  EQVRKEQNFSWFYSELKHHR---IAHYIYYLATDNIRIITHDDTV-LLLRGTRNLLKVST 67
           + V+ E N   F   ++  R   +  Y Y +A    R    D  + L + G      V+ 
Sbjct: 10  QAVKSETNAGEFADLMRTFRELGVQRYDYLVADGRYRYYDADSHIDLQMNGVPQ--PVAA 67

Query: 68  TKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDV 127
           T N AKIK A L    G+  F  +C     AGV  W +D+     SYY  ++ +L  E +
Sbjct: 68  TSNAAKIKAAVLAAQAGQFDFTRFCQLAGEAGVPVWTSDLMSKTVSYYDHEHHVLLAEPI 127

Query: 128 EN 129
             
Sbjct: 128 PG 129


>UniRef50_C7PJK0 Putative phage envelope protein n=1 Tax=Chitinophaga pinensis DSM
           2588 RepID=C7PJK0_CHIPD
          Length = 133

 Score = 74.0 bits (180), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 52/128 (40%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M  +   +    +V+   +F  +  E+K   +  Y Y +          D+  +      
Sbjct: 1   MFTLQQLKAAHAKVKTGADFPRYVQEIKGMGLRRYEYLVQDGTTVYYGDDNHQVESIPIY 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
           +  +++++ + A ++    +H  G++ F  +C   A AGV +WV D      +Y   +  
Sbjct: 61  DPQEINSSSSAAALRHTIAIHQQGQTDFLTFCQQAANAGVEKWVIDTERMVCTYLDKNGA 120

Query: 121 LLYIEDVE 128
           +L  E + 
Sbjct: 121 VLIEEPIP 128


>UniRef50_C2FXP3 Possible bacteriophage envelope protein n=4 Tax=Sphingobacteriales
           RepID=C2FXP3_9SPHI
          Length = 129

 Score = 69.8 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 53/128 (41%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M  +   ++   +V+   +F  +  E+K   +  Y  Y+    I     +          
Sbjct: 1   MFTIEQIKQAHAKVKSGADFPSYMREIKAFGVLGYNAYVTDGRIDYFGAEGYTTSAPAKY 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
           + L++++  +  + ++    H  G + +  +C   A +GV +W+ D++    +YY     
Sbjct: 61  DRLEIASQSDIVQFRKDLKDHQQGLTDYLTFCRDCARSGVEKWIIDMDRMTCAYYDKAGN 120

Query: 121 LLYIEDVE 128
            L IE++ 
Sbjct: 121 ELLIENIP 128


>UniRef50_A5FGM1 Phage envelope protein-like protein n=1 Tax=Flavobacterium
           johnsoniae UW101 RepID=A5FGM1_FLAJ1
          Length = 129

 Score = 69.0 bits (167), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 51/128 (39%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M  +   ++   +V+   +F  +  +L    +  Y  ++   ++     +  ++      
Sbjct: 1   MFTIDQIKEAHSKVKSGADFPNYIQDLIILGVKGYDTFVNDGHVEYYGVNGYIVTSDEKY 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
           NL+ V+ T N     E  + H  G++ +  +C+     G+ +W  D+     +Y+     
Sbjct: 61  NLISVAATVNKELFIEFLVKHQQGETDYLTFCNHAGQCGIAKWRVDIIEMTCTYFDSAEN 120

Query: 121 LLYIEDVE 128
            + IE + 
Sbjct: 121 EILIEKIP 128


>UniRef50_A0AG76 Complete genome n=16 Tax=Listeria RepID=A0AG76_LISW6
          Length = 130

 Score = 65.9 bits (159), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 7/126 (5%)

Query: 8   QKMFEQVRKEQNFSWFYSELKHHR---IAHYIYYLATDNIRIITHDDTVL--LLRGTRNL 62
           Q + + V  E+N   F   ++  +   +  Y + +          ++ ++   L G    
Sbjct: 5   QAILQVVTSEENAGDFPKVIQGFKELGVTKYQFLVQRGVYVFWDEEENMVEATLNGVP-- 62

Query: 63  LKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLL 122
           + VST  +  K++ A      G+  F ++ +    AG+  W  D+   K +Y       L
Sbjct: 63  MPVSTEISAEKLRVAIKEAQAGRIDFEQFVTLAGLAGIGLWEADLAAMKVTYIDNAGNDL 122

Query: 123 YIEDVE 128
            IE + 
Sbjct: 123 VIEPIP 128


>UniRef50_A4VX93 Phage envelope protein n=7 Tax=Bacteria RepID=A4VX93_STRSY
          Length = 159

 Score = 60.5 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 37/90 (41%)

Query: 39  LATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGA 98
           + +  +   +     L  +G +  + VS   N  +       H  G++ F  +C   A A
Sbjct: 66  IQSGQVTYRSQTGQTLEKQGYQVTIPVSDQANLDQFVTILRNHQAGQTDFLTFCQETAEA 125

Query: 99  GVFRWVTDVNHNKRSYYAIDNTLLYIEDVE 128
           G+++WV D+     SY       +++E + 
Sbjct: 126 GIYKWVIDLEAMTCSYMDKAEQAVFVETIP 155


>UniRef50_A5IPS9 Phage envelope protein-like protein n=54 Tax=Staphylococcus
           RepID=A5IPS9_STAA9
          Length = 129

 Score = 59.7 bits (143), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 43/110 (39%)

Query: 19  NFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAA 78
           +F   +   K   + + I  +       +   +  ++    ++   V+   N   +++  
Sbjct: 19  DFPKLFKAFKDMGMTYNIVNIQDGTATYVHQSEDDIVTSSVKSNHPVAQKSNKTIVQDVL 78

Query: 79  LLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVE 128
             H  G++ F  +C  +A AG+++W  D+     +Y  +    +  E + 
Sbjct: 79  TRHQQGQTDFETFCDEMAEAGIYKWHIDIQAGTCTYIDLKEQAIISELIP 128


>UniRef50_B9DJJ2 Putative uncharacterized protein n=1 Tax=Staphylococcus carnosus
           subsp. carnosus TM300 RepID=B9DJJ2_STACT
          Length = 131

 Score = 57.4 bits (137), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 45/115 (39%)

Query: 16  KEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIK 75
              +F     +++   +A Y+Y +          D   + + G    + +    +     
Sbjct: 17  STADFPETLKKIRECSVAKYVYDVKKGIYTFTNQDGDEIHIEGNSTSIIIPRHVDKTAFN 76

Query: 76  EAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVENN 130
           E       G+ TF E+C+  A  G+  W+ D+ H   +Y++    ++ I ++  N
Sbjct: 77  EVLQASRAGEFTFDEFCNRAASFGIASWLVDLIHFNTTYFSKSGDVVKIVEIPKN 131


>UniRef50_B9DUH6 Putative uncharacterized protein n=1 Tax=Streptococcus uberis 0140J
           RepID=B9DUH6_STRU0
          Length = 126

 Score = 57.0 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 1/97 (1%)

Query: 32  IAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALLHICGKSTFREY 91
           I  Y   +       +T D     L     +  V +  +P++  E    H   ++ F  +
Sbjct: 30  IVTYAINIQIGQAIYVTKDGQKCDLPAY-QVEDVKSKSDPSQFLEKLRNHQAKETDFPTF 88

Query: 92  CSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVE 128
           C   A  G+ RWV D+      Y+ +++ ++Y E + 
Sbjct: 89  CQDYATNGICRWVVDLVAKTCRYFDLEDKVVYTETIP 125


>UniRef50_C6VM48 Putative uncharacterized protein n=3 Tax=Lactobacillus plantarum
           RepID=C6VM48_LACPJ
          Length = 127

 Score = 46.6 bits (109), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 47/122 (38%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M ++     +   +    +F+    +     + H+ Y +AT        +  ++  R   
Sbjct: 1   MFKLTEIDDVLNNLGDHADFATIAKKEADLGVQHFQYDVATGATTYFGENGYLVERRTNG 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
             ++V+  ++ A +++ A  +I G+    +     A AG   W  ++  +   +   +  
Sbjct: 61  LAVRVAREEDAAAVEQIAKQYIAGQLALADAVKQFAKAGCQAWTANLKRHIVDFSGDEGK 120

Query: 121 LL 122
           ++
Sbjct: 121 IM 122


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P75988 Uncharacterized protein ycgX n=38 Tax=Enterobact...   160   1e-38
UniRef50_C2FXP3 Possible bacteriophage envelope protein n=4 Tax=...   160   1e-38
UniRef50_C7PJK0 Putative phage envelope protein n=1 Tax=Chitinop...   160   2e-38
UniRef50_A5FGM1 Phage envelope protein-like protein n=1 Tax=Flav...   153   1e-36
UniRef50_C4X7S8 Putative uncharacterized protein n=3 Tax=Klebsie...   153   2e-36
UniRef50_B5BHA0 Putative uncharacterized protein n=32 Tax=Entero...   150   1e-35
UniRef50_A4VX93 Phage envelope protein n=7 Tax=Bacteria RepID=A4...   137   7e-32
UniRef50_P77598 Uncharacterized protein ybcV n=41 Tax=root RepID...   135   5e-31
UniRef50_A5IPS9 Phage envelope protein-like protein n=54 Tax=Sta...   131   6e-30
UniRef50_B9DJJ2 Putative uncharacterized protein n=1 Tax=Staphyl...   130   1e-29
UniRef50_Q03NH8 Phage envelope protein n=3 Tax=Lactobacillales R...   127   1e-28
UniRef50_A0AG76 Complete genome n=16 Tax=Listeria RepID=A0AG76_L...   124   1e-27
UniRef50_B9DUH6 Putative uncharacterized protein n=1 Tax=Strepto...   122   3e-27
UniRef50_C6VM48 Putative uncharacterized protein n=3 Tax=Lactoba...   122   3e-27

Sequences not found previously or not previously below threshold:

UniRef50_B4UX81 Putative uncharacterized protein n=1 Tax=Strepto...    63   3e-09
UniRef50_C6W4X3 Putative uncharacterized protein n=1 Tax=Dyadoba...    63   3e-09
UniRef50_C5V0R4 Putative uncharacterized protein n=1 Tax=Gallion...    59   5e-08
UniRef50_P64929 Uncharacterized protein Rv2012/MT2067 n=10 Tax=B...    57   1e-07
UniRef50_D2VVJ0 Predicted protein n=1 Tax=Naegleria gruberi RepI...    56   3e-07
UniRef50_D2R340 Putative uncharacterized protein n=1 Tax=Pirellu...    55   5e-07
UniRef50_A9AXZ3 Putative uncharacterized protein n=1 Tax=Herpeto...    52   6e-06
UniRef50_UPI00016C3B24 hypothetical protein GobsU_27026 n=1 Tax=...    52   7e-06
UniRef50_Q032J6 Phage envelope protein n=2 Tax=Lactococcus lacti...    51   1e-05
UniRef50_Q13SF6 Putative uncharacterized protein n=2 Tax=Burkhol...    47   2e-04
UniRef50_B1XSM4 Putative uncharacterized protein n=1 Tax=Polynuc...    44   0.001
UniRef50_B0SH12 Phage related protein n=5 Tax=Bacteria RepID=B0S...    44   0.001
UniRef50_D1RLK1 Putative uncharacterized protein n=1 Tax=Legione...    41   0.010

>UniRef50_P75988 Uncharacterized protein ycgX n=38 Tax=Enterobacteriaceae
           RepID=YCGX_ECOLI
          Length = 134

 Score =  160 bits (405), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 134/134 (100%), Positives = 134/134 (100%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR
Sbjct: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
           NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT
Sbjct: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120

Query: 121 LLYIEDVENNKPLI 134
           LLYIEDVENNKPLI
Sbjct: 121 LLYIEDVENNKPLI 134


>UniRef50_C2FXP3 Possible bacteriophage envelope protein n=4 Tax=Sphingobacteriales
           RepID=C2FXP3_9SPHI
          Length = 129

 Score =  160 bits (405), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 53/128 (41%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M  +   ++   +V+   +F  +  E+K   +  Y  Y+    I     +          
Sbjct: 1   MFTIEQIKQAHAKVKSGADFPSYMREIKAFGVLGYNAYVTDGRIDYFGAEGYTTSAPAKY 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
           + L++++  +  + ++    H  G + +  +C   A +GV +W+ D++    +YY     
Sbjct: 61  DRLEIASQSDIVQFRKDLKDHQQGLTDYLTFCRDCARSGVEKWIIDMDRMTCAYYDKAGN 120

Query: 121 LLYIEDVE 128
            L IE++ 
Sbjct: 121 ELLIENIP 128


>UniRef50_C7PJK0 Putative phage envelope protein n=1 Tax=Chitinophaga pinensis DSM
           2588 RepID=C7PJK0_CHIPD
          Length = 133

 Score =  160 bits (404), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 52/128 (40%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M  +   +    +V+   +F  +  E+K   +  Y Y +          D+  +      
Sbjct: 1   MFTLQQLKAAHAKVKTGADFPRYVQEIKGMGLRRYEYLVQDGTTVYYGDDNHQVESIPIY 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
           +  +++++ + A ++    +H  G++ F  +C   A AGV +WV D      +Y   +  
Sbjct: 61  DPQEINSSSSAAALRHTIAIHQQGQTDFLTFCQQAANAGVEKWVIDTERMVCTYLDKNGA 120

Query: 121 LLYIEDVE 128
           +L  E + 
Sbjct: 121 VLIEEPIP 128


>UniRef50_A5FGM1 Phage envelope protein-like protein n=1 Tax=Flavobacterium
           johnsoniae UW101 RepID=A5FGM1_FLAJ1
          Length = 129

 Score =  153 bits (387), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 51/128 (39%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M  +   ++   +V+   +F  +  +L    +  Y  ++   ++     +  ++      
Sbjct: 1   MFTIDQIKEAHSKVKSGADFPNYIQDLIILGVKGYDTFVNDGHVEYYGVNGYIVTSDEKY 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
           NL+ V+ T N     E  + H  G++ +  +C+     G+ +W  D+     +Y+     
Sbjct: 61  NLISVAATVNKELFIEFLVKHQQGETDYLTFCNHAGQCGIAKWRVDIIEMTCTYFDSAEN 120

Query: 121 LLYIEDVE 128
            + IE + 
Sbjct: 121 EILIEKIP 128


>UniRef50_C4X7S8 Putative uncharacterized protein n=3 Tax=Klebsiella pneumoniae
           RepID=C4X7S8_KLEPN
          Length = 130

 Score =  153 bits (386), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/125 (34%), Positives = 74/125 (59%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M+ +V     FEQ R + +++ F +EL+ H++++YIY+++T N+  +  +D V+ ++  R
Sbjct: 1   MELLVRLGHFFEQARSDADYATFANELRRHQVSYYIYFVSTGNMNFVMANDEVVSVKSAR 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
            LL+V    +    + A + H      F +YC  LA AGVF+W+ D+    R Y++ DNT
Sbjct: 61  GLLRVRAEASHCLTRAAVIRHFARAINFEQYCRDLASAGVFKWIVDLEEETRHYWSKDNT 120

Query: 121 LLYIE 125
           LLY E
Sbjct: 121 LLYKE 125


>UniRef50_B5BHA0 Putative uncharacterized protein n=32 Tax=Enterobacteriaceae
           RepID=B5BHA0_SALPK
          Length = 135

 Score =  150 bits (379), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/134 (39%), Positives = 87/134 (64%), Gaps = 2/134 (1%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M+  ++    FE+VRK+ NF+ F  +L+++ IA+YIY++AT N++IITH    + ++  R
Sbjct: 1   MELQLMLNHFFERVRKDANFNTFLIDLEYNNIAYYIYFVATGNVKIITHAGHFISIKSNR 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
            L+KV++T N   IK  +  H  G+ ++ +YC+ LA AGVF+W+ ++N   R Y++ DN 
Sbjct: 61  KLIKVNSTPNTQLIKLTSAKHFSGEHSYEKYCTDLATAGVFKWIVELNQKTRQYWSKDNQ 120

Query: 121 LLYIE--DVENNKP 132
           LLYI+      NKP
Sbjct: 121 LLYIKMWSCRFNKP 134


>UniRef50_A4VX93 Phage envelope protein n=7 Tax=Bacteria RepID=A4VX93_STRSY
          Length = 159

 Score =  137 bits (346), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 1/128 (0%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M  +       EQ     +F    +  K   +   I  + +  +   +     L  +G +
Sbjct: 29  MFTLENINHGHEQF-TGPDFPKLIAYFKDLGMVENIVDIQSGQVTYRSQTGQTLEKQGYQ 87

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
             + VS   N  +       H  G++ F  +C   A AG+++WV D+     SY      
Sbjct: 88  VTIPVSDQANLDQFVTILRNHQAGQTDFLTFCQETAEAGIYKWVIDLEAMTCSYMDKAEQ 147

Query: 121 LLYIEDVE 128
            +++E + 
Sbjct: 148 AVFVETIP 155


>UniRef50_P77598 Uncharacterized protein ybcV n=41 Tax=root RepID=YBCV_ECOLI
          Length = 136

 Score =  135 bits (339), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 57/129 (44%), Positives = 89/129 (68%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M QV +F+++F+QVRK+ N   FYSELK H ++HYIYYLATDNI I+  +D  +L++G +
Sbjct: 1   MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLK 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
            ++ V  ++N   I+ +       + TF++Y   LA AGVFRW+T+++ +KR YY  DN+
Sbjct: 61  KVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWITNIHEHKRYYYTFDNS 120

Query: 121 LLYIEDVEN 129
           LL+ E ++N
Sbjct: 121 LLFTESIQN 129


>UniRef50_A5IPS9 Phage envelope protein-like protein n=54 Tax=Staphylococcus
           RepID=A5IPS9_STAA9
          Length = 129

 Score =  131 bits (330), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 48/127 (37%), Gaps = 1/127 (0%)

Query: 2   DQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRN 61
             +   Q+  +Q     +F   +   K   + + I  +       +   +  ++    ++
Sbjct: 3   FTLSAIQQAHQQF-TGVDFPKLFKAFKDMGMTYNIVNIQDGTATYVHQSEDDIVTSSVKS 61

Query: 62  LLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTL 121
              V+   N   +++    H  G++ F  +C  +A AG+++W  D+     +Y  +    
Sbjct: 62  NHPVAQKSNKTIVQDVLTRHQQGQTDFETFCDEMAEAGIYKWHIDIQAGTCTYIDLKEQA 121

Query: 122 LYIEDVE 128
           +  E + 
Sbjct: 122 IISELIP 128


>UniRef50_B9DJJ2 Putative uncharacterized protein n=1 Tax=Staphylococcus carnosus
           subsp. carnosus TM300 RepID=B9DJJ2_STACT
          Length = 131

 Score =  130 bits (328), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 47/129 (36%)

Query: 2   DQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRN 61
                 ++         +F     +++   +A Y+Y +          D   + + G   
Sbjct: 3   FTKFNLKQALNSEVSTADFPETLKKIRECSVAKYVYDVKKGIYTFTNQDGDEIHIEGNST 62

Query: 62  LLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTL 121
            + +    +     E       G+ TF E+C+  A  G+  W+ D+ H   +Y++    +
Sbjct: 63  SIIIPRHVDKTAFNEVLQASRAGEFTFDEFCNRAASFGIASWLVDLIHFNTTYFSKSGDV 122

Query: 122 LYIEDVENN 130
           + I ++  N
Sbjct: 123 VKIVEIPKN 131


>UniRef50_Q03NH8 Phage envelope protein n=3 Tax=Lactobacillales RepID=Q03NH8_LACBA
          Length = 130

 Score =  127 bits (319), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 4/124 (3%)

Query: 9   KMFEQVRKEQNFSWFYSELKHH---RIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKV 65
            + + V+ E N   F   ++      +  Y Y +A    R    D   + L+       V
Sbjct: 7   AIEQAVKSETNAGEFADLMRTFRELGVQRYDYLVADGRYRYYDADSH-IDLQMNGVPQPV 65

Query: 66  STTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIE 125
           + T N AKIK A L    G+  F  +C     AGV  W +D+     SYY  ++ +L  E
Sbjct: 66  AATSNAAKIKAAVLAAQAGQFDFTRFCQLAGEAGVPVWTSDLMSKTVSYYDHEHHVLLAE 125

Query: 126 DVEN 129
            +  
Sbjct: 126 PIPG 129


>UniRef50_A0AG76 Complete genome n=16 Tax=Listeria RepID=A0AG76_LISW6
          Length = 130

 Score =  124 bits (310), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 3/124 (2%)

Query: 8   QKMFEQVRKEQNFSWFYSELKHH---RIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLK 64
           Q + + V  E+N   F   ++      +  Y + +          ++ ++        + 
Sbjct: 5   QAILQVVTSEENAGDFPKVIQGFKELGVTKYQFLVQRGVYVFWDEEENMVEATLNGVPMP 64

Query: 65  VSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYI 124
           VST  +  K++ A      G+  F ++ +    AG+  W  D+   K +Y       L I
Sbjct: 65  VSTEISAEKLRVAIKEAQAGRIDFEQFVTLAGLAGIGLWEADLAAMKVTYIDNAGNDLVI 124

Query: 125 EDVE 128
           E + 
Sbjct: 125 EPIP 128


>UniRef50_B9DUH6 Putative uncharacterized protein n=1 Tax=Streptococcus uberis 0140J
           RepID=B9DUH6_STRU0
          Length = 126

 Score =  122 bits (307), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 1/113 (0%)

Query: 16  KEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIK 75
              +F           I  Y   +       +T D     L     +  V +  +P++  
Sbjct: 14  SGNDFPSLVKAYMALGIVTYAINIQIGQAIYVTKDGQKCDLPA-YQVEDVKSKSDPSQFL 72

Query: 76  EAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVE 128
           E    H   ++ F  +C   A  G+ RWV D+      Y+ +++ ++Y E + 
Sbjct: 73  EKLRNHQAKETDFPTFCQDYATNGICRWVVDLVAKTCRYFDLEDKVVYTETIP 125


>UniRef50_C6VM48 Putative uncharacterized protein n=3 Tax=Lactobacillus plantarum
           RepID=C6VM48_LACPJ
          Length = 127

 Score =  122 bits (307), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 47/122 (38%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M ++     +   +    +F+    +     + H+ Y +AT        +  ++  R   
Sbjct: 1   MFKLTEIDDVLNNLGDHADFATIAKKEADLGVQHFQYDVATGATTYFGENGYLVERRTNG 60

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
             ++V+  ++ A +++ A  +I G+    +     A AG   W  ++  +   +   +  
Sbjct: 61  LAVRVAREEDAAAVEQIAKQYIAGQLALADAVKQFAKAGCQAWTANLKRHIVDFSGDEGK 120

Query: 121 LL 122
           ++
Sbjct: 121 IM 122


>UniRef50_B4UX81 Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1
           RepID=B4UX81_9ACTO
          Length = 140

 Score = 63.2 bits (152), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 46/137 (33%), Gaps = 11/137 (8%)

Query: 1   MDQVVVFQKMFEQVRKEQ-------NFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTV 53
           M  +    ++   + +          F +    L+   +      +  +    +T    +
Sbjct: 1   MTTIDAIGQLRAALERGAAVRPQVGGFPYLAESLRQAGVTRCRMAVPANAFLYLTEHGDI 60

Query: 54  LLLRGTRNLLKVSTTK--NPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNK 111
           + ++G   +   +T    + A + EA      G++TF E+      AG+  +  D     
Sbjct: 61  V-VQGEPLVTGFATAPPFDRAALVEALRADQAGRTTFPEFVRGCWDAGIAWYDVDTTART 119

Query: 112 RSYYAIDNTLLYIEDVE 128
            +YY       Y ED  
Sbjct: 120 CTYYGTAGDS-YTEDYP 135


>UniRef50_C6W4X3 Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans DSM
           18053 RepID=C6W4X3_DYAFD
          Length = 133

 Score = 62.8 bits (151), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 43/128 (33%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           ++      +  EQ      +      LK   + +Y   +        + +   L+L G  
Sbjct: 4   IELTEELIESAEQRSAGLPYPQLVKNLKAIGVDNYEVKVKNRKRTYTSVNGDKLILAGDL 63

Query: 61  NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
              + +      ++K A      G + +  +   +  AG+  +V D+   K  Y   ++ 
Sbjct: 64  PEFECAEAFKLEEVKAAIKRTQDGLTDYPTFLHEIGAAGIHTYVADLTGMKVIYQGPNSE 123

Query: 121 LLYIEDVE 128
             Y E + 
Sbjct: 124 YEYEEMIP 131


>UniRef50_C5V0R4 Putative uncharacterized protein n=1 Tax=Gallionella ferruginea
           ES-2 RepID=C5V0R4_9PROT
          Length = 135

 Score = 58.9 bits (141), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 2/133 (1%)

Query: 1   MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR 60
           M+  +V       +     FS     L    + +Y            +    V+      
Sbjct: 1   MESKIVADAARATLDGSIPFSEVVRRLLETGVEYYHVDYVALQKTYYSASGEVIKTPIHY 60

Query: 61  NLLK-VSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDN 119
           + L  V++  N  K++ A          +R++      AGV  ++  +   + +Y+    
Sbjct: 61  DDLPSVASEFNLEKLRAAIFDSQQNGQHYRDFTKRAMNAGVQGYIAFLRGKRVTYWGRGG 120

Query: 120 TLLYIEDVENNKP 132
              +IE     KP
Sbjct: 121 DQ-HIEWFPGAKP 132


>UniRef50_P64929 Uncharacterized protein Rv2012/MT2067 n=10 Tax=Bacteria
           RepID=Y2012_MYCTU
          Length = 164

 Score = 57.4 bits (137), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 3/103 (2%)

Query: 20  FSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTK--NPAKIKEA 77
           F      L+   +    ++L        T    VL  +G   +  V+     +   +  A
Sbjct: 45  FPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLD-QGVPLIDGVAEVPAFDRTALVTA 103

Query: 78  ALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
                 G+++FRE+ +    AGV R+V D+ +   +Y+ + + 
Sbjct: 104 LRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQ 146


>UniRef50_D2VVJ0 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VVJ0_NAEGR
          Length = 145

 Score = 56.2 bits (134), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 15/136 (11%)

Query: 1   MDQVVVFQKMFE-------QVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTV 53
           M  +    K F+       +V K   F +    L+   I    ++L        T     
Sbjct: 1   MSVIENINKAFQLAFKISPKVGK---FPYLAETLRRAGIERNRWFLPGCTSIYYTSSGEK 57

Query: 54  LLLRGTRNLLKVSTTK----NPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNH 109
           + +    +LL     +    N   + +A      G++ F ++   +   GV  +  D  +
Sbjct: 58  V-VNQMESLLPYGMHEIKPFNRNLVVDAIRKDQAGETEFPQFLKCIWEGGVVSYEVDFVN 116

Query: 110 NKRSYYAIDNTLLYIE 125
              +YY  D    Y E
Sbjct: 117 RVCTYYGADEKEFYEE 132


>UniRef50_D2R340 Putative uncharacterized protein n=1 Tax=Pirellula staleyi DSM 6068
           RepID=D2R340_9PLAN
          Length = 134

 Score = 55.5 bits (132), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 10/101 (9%), Positives = 30/101 (29%)

Query: 20  FSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAAL 79
           F     +L    +  Y    +             L++         +   + + +++A  
Sbjct: 23  FPQIVQQLISIGVERYHADYSRQETTYYLTSGESLVVEVPHEAQPTAMEFSASAVEQAVR 82

Query: 80  LHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT 120
               G+ ++R++      AG   +   +   +  Y+     
Sbjct: 83  QSQRGEHSYRDFVRKTQAAGCVGYFVQLTGRRVIYFGRCGE 123


>UniRef50_A9AXZ3 Putative uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus
           ATCC 23779 RepID=A9AXZ3_HERA2
          Length = 133

 Score = 52.0 bits (123), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 32/110 (29%), Gaps = 3/110 (2%)

Query: 20  FSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLK-VSTTKNPAKIKEAA 78
           F      L    +  Y   L    +    H     +     N L  +++  +    + A 
Sbjct: 23  FPEVIQRLSP-SVEQYHVDLIRLEMTYYGHQGQSFVYPLNLNKLPAIASQLDLVAFQTAL 81

Query: 79  LLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVE 128
                G+ ++  +      AGV  ++  ++     Y   +     +E   
Sbjct: 82  KASQRGEISYPTFLQQSMAAGVSSYLVFLSGRLAIYVGRNG-AYSVEPFP 130


>UniRef50_UPI00016C3B24 hypothetical protein GobsU_27026 n=1 Tax=Gemmata obscuriglobus UQM
           2246 RepID=UPI00016C3B24
          Length = 135

 Score = 51.6 bits (122), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 35/112 (31%), Gaps = 5/112 (4%)

Query: 20  FSWFYSELKHHRIAHYIYYLATDNIRIITH--DDTVLLLRGTRNLLKVSTTKNPAKIKEA 77
           F      L    +  Y   L  D         +   L L G    +      +   ++ A
Sbjct: 24  FPETVRRLSEAGVERYHVDLTRDETTYYLSCGESHALALGGPHGTINGPF--DATGVEGA 81

Query: 78  ALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVEN 129
                 G+ T+RE+ S +  AG   + T +   K  Y       +++E    
Sbjct: 82  VRASQRGEVTYREFLSRIMAAGCVGYFTQITGRKVQYVGRTGD-MHVEPFPG 132


>UniRef50_Q032J6 Phage envelope protein n=2 Tax=Lactococcus lactis subsp. cremoris
           RepID=Q032J6_LACLS
          Length = 137

 Score = 51.2 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 4/111 (3%)

Query: 20  FSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRG--TRNLLKVSTTKNPAKIKEA 77
           F +    L+   +   ++ L        T    + L          +V+ T +   + +A
Sbjct: 24  FPYLAECLREAGVLKNVWTLPAGQSTFWTVAGVISLTNAPMLTGFQEVA-TFDREALIKA 82

Query: 78  ALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVE 128
                 GK+TF E+ S    AGV  +  +      +Y        Y+E   
Sbjct: 83  LRADQAGKTTFPEFLSATWEAGVIDYEANFEKRIVTYRGAQGEE-YVEAYP 132


>UniRef50_Q13SF6 Putative uncharacterized protein n=2 Tax=Burkholderia
           RepID=Q13SF6_BURXL
          Length = 135

 Score = 47.0 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/110 (10%), Positives = 29/110 (26%), Gaps = 1/110 (0%)

Query: 19  NFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAA 78
           +F      L    +  Y                   ++        ++   +   + +A 
Sbjct: 26  DFGSVVRALGEAGVESYFTDYRRGEHTYYAPSGETHVIALPLPDTAIANAFDADAVNQAV 85

Query: 79  LLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVE 128
                G   + E+ S    AG   +   +   +  Y+      +++E   
Sbjct: 86  RGAQSGAVKYAEFVSRTLAAGCVGYFVWIAGRQVQYFGRRG-EIHVERFP 134


>UniRef50_B1XSM4 Putative uncharacterized protein n=1 Tax=Polynucleobacter
           necessarius subsp. necessarius STIR1 RepID=B1XSM4_POLNS
          Length = 132

 Score = 44.3 bits (103), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/121 (10%), Positives = 31/121 (25%), Gaps = 1/121 (0%)

Query: 8   QKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVST 67
           +   E       F      L    +  Y       +      +     +      +++  
Sbjct: 11  KCAHESHTGILTFPEVLGRLIEVGVESYFVDYRDQSTTYYLSNTDAHRVAMPMLPIEMPN 70

Query: 68  TKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDV 127
             N   +  A       +  + E+      AG   ++  +     SYY      +++E  
Sbjct: 71  AFNKDGVISAIRGAQSDRLRYPEFLELTMSAGCIGYIVWIAGRHVSYYGRRG-EVHVEHF 129

Query: 128 E 128
            
Sbjct: 130 P 130


>UniRef50_B0SH12 Phage related protein n=5 Tax=Bacteria RepID=B0SH12_LEPBA
          Length = 139

 Score = 44.3 bits (103), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 4/111 (3%)

Query: 20  FSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVST--TKNPAKIKEA 77
           F      L+   +    + L +        + +V+  +G   ++ +      +   +  A
Sbjct: 25  FLVLAEVLRLAGVTRNRWSLPSCQSVYHMKEGSVVQ-QGNPIVMGIHEIPKFDSEGLIRA 83

Query: 78  ALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVE 128
                 GKS+F E+  +   AGV  +  D    K  YY + N   Y+E+  
Sbjct: 84  LRTDQEGKSSFPEFLKSAWEAGVIGYDVDFESRKVVYYGV-NDESYMEEYP 133


>UniRef50_D1RLK1 Putative uncharacterized protein n=1 Tax=Legionella longbeachae
           D-4968 RepID=D1RLK1_LEGLO
          Length = 141

 Score = 41.2 bits (95), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 4/111 (3%)

Query: 20  FSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLL--RGTRNLLKVSTTKNPAKIKEA 77
           F      L+   +    + L +     I  + +V+ +       + +V    +   +  A
Sbjct: 25  FPIIAEVLRQAGVETNRWSLPSCQSIYIMSEGSVVQVGTPLVTGMYEVP-KFDRDALIAA 83

Query: 78  ALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVE 128
                 GKSTF E+  +   AGV  +  +    +  YY + N+  Y+E   
Sbjct: 84  IRTDQEGKSTFPEFLHSAWDAGVIGYDVNFVGREVVYYGV-NSERYVEKYP 133


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.312    0.132    0.345 

Lambda     K      H
   0.267   0.0406    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 635,138,110
Number of Sequences: 3077464
Number of extensions: 18548992
Number of successful extensions: 76452
Number of sequences better than 1.0e-01: 27
Number of HSP's better than  0.1 without gapping: 43
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 76371
Number of HSP's gapped (non-prelim): 57
length of query: 134
length of database: 1,040,396,356
effective HSP length: 99
effective length of query: 35
effective length of database: 735,727,420
effective search space: 25750459700
effective search space used: 25750459700
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.9 bits)
S2: 87 (38.1 bits)
