 |
| Job Description | P62066 | | Confidence | 1.84% | Date | Thu Jan 5 12:07:28 GMT 2012 |
| Rank | 79 | Aligned Residues | 27 |
| % Identity | 48% | Template | c3rrrB_ |
| PDB info |
PDB header:viral protein | Chain: B: PDB Molecule:fusion glycoprotein f0; |
PDBTitle: structure of the rsv f protein in the post-fusion conformation
|
| Resolution | 2.82 Å |
|
|   |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | A | R | F | S | C | G | K | T | A | Q | L | S | K | K | Q | T | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | Y | S | P | E | I | F | P | S |
| Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Sequence |   |
V | D | T | V | S | V | G | N | T | L | Y | Y | V | N | K | Q | E | G | K | S | L | Y | V | K | G | E | P | I | I | N | F | Y | D | P | L | V | F | P | S |
| Template Known Secondary structure |   |
| S |  |  |  |  | T | T |  |  |  |  | S | S |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
447 | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|