Phyre 2 alignment of Q9XB42 with d2j7qa1

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Job Description | Q9XB42
Confidence | 8.70% | Date | Thu Jan 5 12:38:30 GMT 2012
Rank | 11 | Aligned Residues | 48
% Identity | 19% | Template | d2j7qa1
SCOP info | Cysteine proteinases | Cysteine proteinases | M48USP-like
Resolution | 1.8

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | K | I | I | S | K | R | R | A | M | T | I | Y | R | Q | H | P | E | S | R | I | F | R | Y | C | T | G | K | Y | Q | W | H | G | S | V | C | H | Y | T | G | R | D | V | P | D | I | A | G | V | L | A | V | Y | A | E | R | R | Q | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | G | V | I | V | A | R | G | A | T | Y | V | F | D | P | H | T | T | D | L | S | A | E | . | . | . | . | . | . | . | . | . | . | . | A | A | V | Y | V | C | D | D | F | T | E | A | I | S | A | L | S | F | F | T | E | X | I | G | D
Template Known Secondary structure |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  | S |  | B | T | T | B | S | S | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  | T | T | T | S |  |  | G | G | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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