Phyre 2 Results for Q9XB42

Email | l.a.kelley@imperial.ac.uk
Description | Q9XB42
Date | Thu Jan 5 12:38:30 GMT 2012
Unique Job ID | ddd3c13c5b1f0cd8

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d2cqma1 |
|  | 58.6 | 30 | Fold:Prokaryotic ribosomal protein L17 Superfamily:Prokaryotic ribosomal protein L17 Family:Prokaryotic ribosomal protein L17
2 | d1gd8a_ |
|  | 53.1 | 30 | Fold:Prokaryotic ribosomal protein L17 Superfamily:Prokaryotic ribosomal protein L17 Family:Prokaryotic ribosomal protein L17
3 | d2zjrk1 |
|  | 53.1 | 25 | Fold:Prokaryotic ribosomal protein L17 Superfamily:Prokaryotic ribosomal protein L17 Family:Prokaryotic ribosomal protein L17
4 | c3bboP_ |
|  | 34.8 | 25 | PDB header:ribosome Chain: P: PDB Molecule:ribosomal protein l17; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome
5 | d2qamn1 |
|  | 30.5 | 29 | Fold:Prokaryotic ribosomal protein L17 Superfamily:Prokaryotic ribosomal protein L17 Family:Prokaryotic ribosomal protein L17
6 | d1bnla_ |
|  | 15.5 | 18 | Fold:C-type lectin-like Superfamily:C-type lectin-like Family:Endostatin
7 | c2qh7A_ |
|  | 12.3 | 40 | PDB header:metal binding protein Chain: A: PDB Molecule:zinc finger cdgsh-type domain 1; PDBTitle: mitoneet is a uniquely folded 2fe-2s outer mitochondrial membrane2 protein stabilized by pioglitazone
8 | c3fnvB_ |
|  | 12.3 | 40 | PDB header:metal binding protein Chain: B: PDB Molecule:cdgsh iron sulfur domain-containing protein 2; PDBTitle: crystal structure of miner1: the redox-active 2fe-2s protein causative2 in wolfram syndrome 2
9 | c2gyrB_ |
|  | 11.2 | 38 | PDB header:hormone/growth factor Chain: B: PDB Molecule:neurotrophic factor artemin, isoform 3; PDBTitle: crystal structure of human artemin
10 | d1ir1s_ |
|  | 11.1 | 25 | Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit
11 | d2j7qa1 |
|  | 8.7 | 19 | Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:M48USP-like
12 | c3fkaD_ |
|  | 8.5 | 13 | PDB header:unknown function Chain: D: PDB Molecule:uncharacterized ntf-2 like protein; PDBTitle: crystal structure of a ntf-2 like protein of unknown function2 (spo1084) from silicibacter pomeroyi dss-3 at 1.69 a resolution
13 | d1koea_ |
|  | 8.4 | 19 | Fold:C-type lectin-like Superfamily:C-type lectin-like Family:Endostatin
14 | d1ztxe1 |
|  | 8.2 | 12 | Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Class II viral fusion proteins C-terminal domain
15 | c2wsfN_ |
|  | 7.3 | 20 | PDB header:photosynthesis Chain: N: PDB Molecule:photosystem i-n subunit; PDBTitle: improved model of plant photosystem i
16 | c3egpA_ |
|  | 7.3 | 25 | PDB header:viral protein Chain: A: PDB Molecule:envelope protein; PDBTitle: crystal structure analysis of dengue-1 envelope protein2 domain iii
17 | d1ok8a1 |
|  | 6.8 | 24 | Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Class II viral fusion proteins C-terminal domain
18 | c2kztA_ |
|  | 6.7 | 20 | PDB header:apoptosis Chain: A: PDB Molecule:programmed cell death protein 4; PDBTitle: structure of the tandem ma-3 region of pdcd4
19 | d1hd2a_ |
|  | 6.6 | 12 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
20 | c2o01N_ |
|  | 5.9 | 20 | PDB header:photosynthesis Chain: N: PDB Molecule:photosystem i-n subunit; PDBTitle: the structure of a plant photosystem i supercomplex at 3.42 angstrom resolution
21 | c2riqA_ |
| not modelled | 5.9 | 15 | PDB header:transferase Chain: A: PDB Molecule:poly [adp-ribose] polymerase 1; PDBTitle: crystal structure of the third zinc-binding domain of human parp-1
22 | d2j01s1 |
| not modelled | 5.7 | 33 | Fold:Ribonuclease H-like motif Superfamily:Translational machinery components Family:Ribosomal protein L18 and S11
23 | c3ccjU_ |
| not modelled | 5.7 | 23 | PDB header:ribosome Chain: U: PDB Molecule:50s ribosomal protein l24e; PDBTitle: structure of anisomycin resistant 50s ribosomal subunit: 23s rrna2 mutation c2534u
24 | d1vqou1 |
| not modelled | 5.6 | 23 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Ribosomal protein L24e
25 | c2iosA_ |
| not modelled | 5.5 | 40 | PDB header:antitumor protein Chain: A: PDB Molecule:programmed cell death 4, pdcd4; PDBTitle: crystal structure of the c-terminal ma3 domain of pdcd42 (mouse); form 3
26 | c2rg8A_ |
| not modelled | 5.5 | 20 | PDB header:apoptosis, translation Chain: A: PDB Molecule:programmed cell death protein 4; PDBTitle: crystal structure of programmed for cell death 4 middle ma32 domain
27 | d1m9sa3 |
| not modelled | 5.4 | 18 | Fold:SH3-like barrel Superfamily:Prokaryotic SH3-related domain Family:GW domain
28 | c2h0pA_ |
| not modelled | 5.2 | 18 | PDB header:viral protein Chain: A: PDB Molecule:envelope glycoprotein; PDBTitle: nmr structure of the dengue-4 virus envelope protein domain2 iii
29 | c3oe3B_ |
| not modelled | 5.1 | 16 | PDB header:hydrolase inhibitor Chain: B: PDB Molecule:putative periplasmic protein; PDBTitle: crystal structure of plic-st, periplasmic lysozyme inhibitor of c-type2 lysozyme from salmonella typhimurium
30 | d1pjwa_ |
| not modelled | 5.1 | 18 | Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Class II viral fusion proteins C-terminal domain
31 | c2jqmA_ |
| not modelled | 5.1 | 18 | PDB header:transferase Chain: A: PDB Molecule:envelope protein e; PDBTitle: yellow fever envelope protein domain iii nmr structure2 (s288-k398)