18/01/2012 20:43:32 : INFO  : Run start: Wed Jan 18 20:43:30 GMT 2012
18/01/2012 20:43:41 : INFO  : Initialised job
18/01/2012 20:43:44 : INFO  : Renaming log file 'phyre2_20120118_204329.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/ddd3c13c5b1f0cd8/phyre_20120118_204329.log'
18/01/2012 20:43:46 : INFO  : Initialised job:
Sequence
>batch____
MKIISKRRAMTIYRQHPESRIFRYCTGKYQWHGSVCHYTGRDVPDIAGVLAVYAERRQDR
NGPYTCLMSITLN

18/01/2012 20:43:51 : INFO  : Checked sequence
18/01/2012 20:43:57 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 20:43:59 : INFO  : PSI-BLAST 3 iterations
18/01/2012 20:44:29 : INFO  : PSI-BLAST 5 iterations
18/01/2012 20:44:58 : INFO  : Finished PSI-BLAST
18/01/2012 20:45:02 : INFO  : Running Buildali to generate a3m file
18/01/2012 20:46:59 : INFO  : Converting to HMM
18/01/2012 20:47:02 : INFO  : Calibrating HMM
18/01/2012 20:47:19 : INFO  : Searching HMM database
18/01/2012 20:50:29 : INFO  : Finished buildali
18/01/2012 20:50:33 : INFO  : Predicting secondary structure
18/01/2012 20:50:48 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 20:50:52 : INFO  : Predicting Disordered regions
18/01/2012 20:51:00 : INFO  : Predicted Disorder (Disopred)
18/01/2012 20:51:05 : INFO  : Running memsat_svm check
18/01/2012 20:54:29 : INFO  : Running memsat_svm full
18/01/2012 20:57:04 : INFO  : Predicted Transmembrane (memsat_svm) ID 'ddd3c13c5b1f0cd8'
18/01/2012 20:57:07 : INFO  : Initialising fold library search
18/01/2012 20:57:13 : INFO  : Initialised search input
18/01/2012 20:57:17 : INFO  : Building Ensemble models
18/01/2012 20:57:24 : INFO  : Building hh.d2cqma1.model.1.pdb
18/01/2012 20:57:52 : INFO  : Building d2cqma1.1.pdb
18/01/2012 20:58:20 : INFO  : Building d1gd8a_.2.pdb
18/01/2012 20:58:48 : INFO  : Building d2zjrk1.3.pdb
18/01/2012 20:59:17 : INFO  : Building c3bboP_.4.pdb
18/01/2012 20:59:45 : INFO  : Building d2qamn1.5.pdb
18/01/2012 21:00:14 : INFO  : Building d1bnla_.6.pdb
18/01/2012 21:00:42 : INFO  : Building c2qh7A_.7.pdb
18/01/2012 21:01:08 : INFO  : Building c3fnvB_.8.pdb
18/01/2012 21:01:34 : INFO  : Building c2gyrB_.9.pdb
18/01/2012 21:02:04 : INFO  : Building d1ir1s_.10.pdb
18/01/2012 21:02:34 : INFO  : Building d2j7qa1.11.pdb
18/01/2012 21:03:05 : INFO  : Building c3fkaD_.12.pdb
18/01/2012 21:03:34 : INFO  : Building d1koea_.13.pdb
18/01/2012 21:04:02 : INFO  : Building d1ztxe1.14.pdb
18/01/2012 21:04:29 : INFO  : Building c2wsfN_.15.pdb
18/01/2012 21:04:57 : INFO  : Building c3egpA_.16.pdb
18/01/2012 21:05:25 : INFO  : Building d1ok8a1.17.pdb
18/01/2012 21:05:53 : INFO  : Building c2kztA_.18.pdb
18/01/2012 21:06:19 : INFO  : Building d1hd2a_.19.pdb
18/01/2012 21:06:46 : INFO  : Building c2o01N_.20.pdb
18/01/2012 21:07:48 : INFO  : Finished HH model building
18/01/2012 21:07:51 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 21:10:47 : INFO  : html domain output complete ID 'ddd3c13c5b1f0cd8'
18/01/2012 21:18:40 : INFO  : Run end  : Wed Jan 18 21:18:38 GMT 2012
