 |
| Job Description | P77731 | | Confidence | 28.97% | Date | Thu Jan 5 12:32:12 GMT 2012 |
| Rank | 39 | Aligned Residues | 106 |
| % Identity | 10% | Template | d1rc6a_ |
| SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| YlbA-like
|
| Resolution | 2.60 |
|
 |
|   |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | I | E | T | Q | Q | R | D | F | F | H | I | N | N | G | L | V | E | R | Y | H | D | L | A | L | V | E | I | L | E | Q | D | C | T | L | I | S | I | N | R | A | Q | P | A | N | L | P | L | T | I | H | E | L | E | R | H | P | L | G | T | Q | A | F | I | . |
P | M | K | G | E | V | F | V | V | V | V | A | L | G | D |
| Query Conservation |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|
|   |   |
|
|   |
|
| . |
|
|   |   |   |   |   |
|
|
|
|
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
| Template Conservation |   |
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |
|
|   |   | . | . |
|
|   |
|   |   |   |   |   |   |
|   |
|
| . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |   |
|
|   |
|   |   |   |
|   |   |   |
| . | . | . |
| Template Sequence |   |
L | L | T | P | D | G | L | V | K | N | I | I | P | G | F | E | N | C | D | A | T | I | L | S | T | P | K | L | . |
. |
G | A | S | F | V | D | Y | L | V | T | L | H | Q | N | . |
. |
. |
. |
G | G | N | Q | Q | G | F | G | G | E | G | I | E | T | F | L | Y | V | I | S | G | N | I | T | A | K | A | E | G | . |
. |
. |
| Template Known Secondary structure |   |
 |  |
| G | G | G | S |
|
| B |
|
| T | T |  |  |  |  |  |  |  |  |
|
|
| G | G | G | . | . | T |
| S | S |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  | S | S |
| S |
|
| T | T |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  | T | T | . | . | . |
| Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
| . | . | . |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1028 | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | |
|
. | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | |
|
|
|
1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | |
|
|
|   |
|   |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
D | K | P | D | L | S | T | L | R | A | F | I | T | N | G | E | Q | G | V | N | Y | H | R | N | V | W | H | H | P | L | F | A | W | Q | R | V | T | D | F | L | T | I | D | R |
| Query Conservation |   |
  |   |
|
|   |   |   |   |
|
|
|   |   |   |
|   |
|
|
|   |
|   |   |
|
|
|
|   |
|   |   |   |
|   |   |   |   |
|
|   |
|
|   |   |
| Alig confidence |   |
. | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
. | . | . | . | . | . | . | . |   |   |   |   |
|   |   |
|
|   |   |   |   |
|   |
|   |   |
|   |   |   |
|   |
|   |   |   |
|   |   |
|   |
|   |   |
| Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
K | T | F | A | L | S | E | G | G | Y | L | Y | C | P | P | G | S | L | M | T | F | V | N | A | Q | A | E | D | S | Q | I | F | L | Y | K | R |
| Template Known Secondary structure |   |
. | . | . | . | . | . | . | . |  |  |  |  |  |  | T | T |  |  |  |  |  |
| T | T |
|
|
|  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|
|
|
|
|
1099 | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . | 1130 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|