Job Description P16682 Confidence 42.91% Date Thu Jan 5 11:35:27 GMT 2012 Rank 207 Aligned Residues 78 % Identity 13% Template c3qufB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:extracellular solute-binding protein, family 1; PDBTitle: the structure of a family 1 extracellular solute-binding protein from2 bifidobacterium longum subsp. infantis Resolution 1.70 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80					.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.																					.	.	.	.						.
Query SS confidence																																					.																					.	.	.	.						.
Query Sequence		A	E	E	Q	E	K	A	L	N	F	G	I	I	S	T	E	S	Q	Q	N	L	K	P	Q	W	T	P	F	L	Q	D	M	E	K	K	.	L	G	V	K	V	N	A	F	F	A	P	D	Y	A	G	I	I	Q	G	M	.	.	.	.	R	F	N	K	V	.	D	I	A	W	Y	G	N	L	S	A	M	E	A	V
Query Conservation																																					.																					.	.	.	.						.
Alig confidence																				.	.	.	.														.																					.	.	.	.						.
Template Conservation																				.	.	.	.
Template Sequence		G	T	A	G	G	G	K	T	K	I	S	F	Y	S	Y	F	K	D	.	.	.	.	N	Q	I	G	E	V	V	K	G	F	E	K	K	N	P	D	I	T	L	D	V	Q	Y	G	Q	D	P	A	Q	Y	I	S	T	L	Q	T	R	L	A	G	G	K	P	P	T	I	F	N	L	T	X	D	N	R	T	D	V	X
Template Known Secondary structure				G	G	G										S	S			.	.	.	.															T	T									S	S														S	S	S			S						T	T	T
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	A	N	G	Q	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	G	A	A	L	D	I
Template Known Secondary structure				T		B
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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