BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (133 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_B5R3Y5 Nickel-responsive regulator n=96 Tax=Enterobacte... 266 2e-70 UniRef50_B9JL06 Putative nickel-responsive regulator n=2 Tax=Pro... 166 2e-40 UniRef50_B1M0C3 Putative transcriptional regulator, CopG family ... 148 6e-35 UniRef50_B3QCC6 Putative nickel-responsive regulator n=5 Tax=Rho... 142 4e-33 UniRef50_Q578T1 Nickel-responsive regulator n=36 Tax=Brucella Re... 140 2e-32 UniRef50_C5BCE8 Nickel-responsive regulator n=12 Tax=Proteobacte... 133 2e-30 UniRef50_Q2Y9N4 Transcriptional regulator, CopG family n=2 Tax=N... 131 6e-30 UniRef50_Q217C6 Transcriptional regulator, CopG family n=3 Tax=R... 131 7e-30 UniRef50_Q0A737 Transcriptional regulator, CopG family n=1 Tax=A... 129 3e-29 UniRef50_A1KA89 Nickel responsive regulator protein n=8 Tax=Prot... 126 2e-28 UniRef50_D1T1S2 Transcriptional regulator NikR, CopG family n=1 ... 124 1e-27 UniRef50_Q88HL5 Putative nickel-responsive regulator n=2 Tax=Pse... 119 2e-26 UniRef50_B8J1Q4 Putative nickel-responsive regulator n=3 Tax=Bac... 119 3e-26 UniRef50_Q1MPD3 Putative nickel-responsive regulator n=1 Tax=Law... 119 3e-26 UniRef50_Q01RT6 Putative nickel-responsive regulator n=2 Tax=Bac... 108 4e-23 UniRef50_A3V7Y8 Transcriptional regulator, CopG family n=2 Tax=A... 108 6e-23 UniRef50_Q727G4 Putative nickel-responsive regulator n=21 Tax=ce... 105 4e-22 UniRef50_Q2IN94 Putative nickel-responsive regulator n=9 Tax=Del... 103 2e-21 UniRef50_A3K349 Transcriptionalregulator, CopG family protein n=... 102 3e-21 UniRef50_Q2VNK9 Probable nickel responsive regulator n=1 Tax=Met... 100 1e-20 UniRef50_B3E7G1 Putative nickel-responsive regulator n=22 Tax=ce... 100 2e-20 UniRef50_B5YAK0 Putative nickel-responsive regulator n=2 Tax=Dic... 99 3e-20 UniRef50_Q6AS54 Putative nickel-responsive regulator n=3 Tax=Del... 99 4e-20 UniRef50_B4S8H9 Putative transcriptional regulator, CopG family ... 96 4e-19 UniRef50_A4G0H7 Putative nickel-responsive regulator n=11 Tax=Me... 94 1e-18 UniRef50_B1M926 Putative transcriptional regulator, CopG family ... 94 1e-18 UniRef50_C7MLI8 Predicted transcriptional regulator with CopG/Ar... 91 9e-18 UniRef50_Q8TQZ1 Putative nickel-responsive regulator 1 n=7 Tax=M... 90 2e-17 UniRef50_D0WH84 Toxin-antitoxin system protein n=1 Tax=Slackia e... 90 2e-17 UniRef50_B5IB41 NikR C terminal nickel binding domain family n=1... 88 8e-17 UniRef50_D2RI63 Transcriptional regulator NikR, CopG family n=3 ... 88 1e-16 UniRef50_Q1H065 Transcriptional regulator, CopG family n=4 Tax=P... 87 1e-16 UniRef50_C7N0Q2 Predicted transcriptional regulator with CopG/Ar... 87 2e-16 UniRef50_C1SLF1 Predicted transcriptional regulator with CopG/Ar... 87 2e-16 UniRef50_A0B6X8 Putative nickel-responsive regulator n=4 Tax=Eur... 84 1e-15 UniRef50_Q8PZ28 Putative nickel-responsive regulator 1 n=9 Tax=A... 84 2e-15 UniRef50_C6XCC3 Transcriptional regulator NikR, CopG family n=1 ... 83 3e-15 UniRef50_O29515 Putative nickel-responsive regulator n=1 Tax=Arc... 82 6e-15 UniRef50_C6P2L7 Putative transcriptional regulator, CopG family ... 81 1e-14 UniRef50_C6QSD1 Putative transcriptional regulator, CopG family ... 81 1e-14 UniRef50_A6G2I6 Nickel responsive regulator n=1 Tax=Plesiocystis... 80 2e-14 UniRef50_UPI00016C3510 nickel responsive regulator n=1 Tax=Gemma... 80 3e-14 UniRef50_A8FTW2 Nickel-responsive regulator n=3 Tax=Shewanella R... 79 3e-14 UniRef50_D1YXH4 Putative nickel-responsive regulator n=1 Tax=Met... 78 8e-14 UniRef50_B4U5P2 Putative transcriptional regulator, CopG family ... 77 2e-13 UniRef50_Q17Z13 Putative nickel-responsive regulator n=26 Tax=Ba... 76 3e-13 UniRef50_C3XHL4 Nickel responsive regulator n=3 Tax=Proteobacter... 76 4e-13 UniRef50_A3PPB2 Transcriptional regulator, CopG family n=3 Tax=R... 75 5e-13 UniRef50_A7I1P3 Putative nickel-responsive regulator n=1 Tax=Cam... 74 1e-12 UniRef50_A6L9L6 Transcriptional regulator, putative nickel respo... 72 4e-12 UniRef50_Q8TV90 Putative nickel-responsive regulator n=1 Tax=Met... 72 5e-12 UniRef50_B9XA69 Putative transcriptional regulator, CopG family ... 72 6e-12 UniRef50_O26834 Putative nickel-responsive regulator 2 n=5 Tax=M... 71 1e-11 UniRef50_C9M5I2 Toxin-antitoxin system protein n=2 Tax=Synergist... 70 2e-11 UniRef50_C1TP45 Predicted transcriptional regulator with CopG/Ar... 67 1e-10 UniRef50_B5JR54 NikR C terminal nickel binding domain family n=1... 66 4e-10 UniRef50_Q5V2S1 Putative nickel-responsive regulator n=1 Tax=Hal... 66 4e-10 UniRef50_A9GSQ5 Putative transcriptional regulator, CopG family ... 65 1e-09 UniRef50_Q18I31 Putative nickel-responsive regulator n=10 Tax=Ha... 64 1e-09 UniRef50_C8PGA0 Nickel-responsive regulator n=1 Tax=Campylobacte... 64 1e-09 UniRef50_UPI0001C418D8 nickel responsive transcriptional regulat... 62 5e-09 UniRef50_A3DKG0 Putative transcriptional regulator, CopG family ... 62 5e-09 UniRef50_C7NP61 Transcriptional regulator NikR, CopG family n=1 ... 61 8e-09 UniRef50_Q18EC5 Transcription regulator; probably nickel respons... 60 2e-08 UniRef50_A1RQZ3 Transcriptional regulator, CopG family n=4 Tax=T... 60 3e-08 UniRef50_C7JHT8 Transcriptional regulator CopG n=7 Tax=Acetobact... 59 5e-08 UniRef50_A1RZK4 Transcriptional regulator, CopG family n=1 Tax=T... 59 7e-08 UniRef50_A2BJB5 Nickel responsive regulator n=1 Tax=Hyperthermus... 58 1e-07 UniRef50_A3M466 CopG n=14 Tax=Acinetobacter RepID=A3M466_ACIBT 57 2e-07 UniRef50_C3N649 Putative nickel-responsive regulator n=10 Tax=Su... 56 4e-07 UniRef50_O26703 Putative nickel-responsive regulator 1 n=1 Tax=M... 54 1e-06 UniRef50_Q7MS86 Putative uncharacterized protein n=1 Tax=Wolinel... 53 3e-06 UniRef50_Q31EP2 Transcriptional regulator, CopG family n=1 Tax=T... 53 4e-06 UniRef50_D1JIB2 Putative nickel responsive regulator 1 n=2 Tax=e... 50 2e-05 UniRef50_Q58177 Uncharacterized transcriptional regulator MJ0767... 50 2e-05 UniRef50_C7NX71 Transcriptional regulator NikR, CopG family n=2 ... 50 3e-05 UniRef50_B9Z9H3 Putative transcriptional regulator, CopG family ... 50 3e-05 UniRef50_Q3ITC6 Probable transcription regulator n=1 Tax=Natrono... 49 7e-05 UniRef50_Q2GAR7 Transcriptional regulator, CopG family n=2 Tax=A... 48 8e-05 UniRef50_C5SGL4 Putative transcriptional regulator, CopG family ... 48 8e-05 UniRef50_B8GWH5 Nickel-responsive regulator NikR n=2 Tax=Cauloba... 48 1e-04 UniRef50_A4YI93 Transcriptional regulator, CopG family n=1 Tax=M... 47 1e-04 UniRef50_B1L5X4 Putative transcriptional regulator, CopG family ... 46 4e-04 UniRef50_D2RX96 Transcriptional regulator NikR, CopG family n=4 ... 44 0.002 UniRef50_B8D4E8 Putative transcriptional regulator, CopG family ... 43 0.003 UniRef50_D2RV27 Transcriptional regulator NikR, CopG family n=1 ... 42 0.008 UniRef50_Q5V799 Transcriptional regulator n=3 Tax=Halobacteriace... 40 0.019 UniRef50_C6A437 Predicted transcriptional regulators containing ... 39 0.041 >UniRef50_B5R3Y5 Nickel-responsive regulator n=96 Tax=Enterobacteriaceae RepID=NIKR_SALEP Length = 133 Score = 266 bits (679), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 131/133 (98%), Positives = 132/133 (99%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILR ALAQEATQ+HGTQGFAVLSYVY Sbjct: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRGALAQEATQEHGTQGFAVLSYVY 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG Sbjct: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 Query: 121 VRHGHLQCLPKED 133 VRHGHLQCLPKED Sbjct: 121 VRHGHLQCLPKED 133 >UniRef50_B9JL06 Putative nickel-responsive regulator n=2 Tax=Proteobacteria RepID=NIKR_AGRRK Length = 145 Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 77/133 (57%), Positives = 107/133 (80%), Gaps = 1/133 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQE-ATQQHGTQGFAVLSYV 59 MQR+TIT+DDDLLET+D +S++RGY +RSE +RD++R A+ +E A T+ +A L+YV Sbjct: 1 MQRITITIDDDLLETIDKISEQRGYASRSETLRDLVRDAVTREQAAVDSETKCYATLTYV 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 YEHE RDL+ R+ +TQHHHHDLSV+TLHVH++ DCLE++VLKG +G+++ FAD V+ QR Sbjct: 61 YEHETRDLSRRLTTTQHHHHDLSVSTLHVHVDGHDCLEVSVLKGTVGEIKSFADSVVTQR 120 Query: 120 GVRHGHLQCLPKE 132 GVR G+L +P E Sbjct: 121 GVRFGNLHLIPSE 133 >UniRef50_B1M0C3 Putative transcriptional regulator, CopG family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M0C3_METRJ Length = 147 Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 72/135 (53%), Positives = 94/135 (69%), Gaps = 3/135 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG--FAVLSY 58 MQR+TIT+DD LL +D L RRGY +RSEA+RDI+R ALA + G G + LSY Sbjct: 1 MQRITITIDDALLTAVDDLCARRGYGSRSEAVRDIVRDALAPARAAETGGSGACYGALSY 60 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 VY H RDLA R+ + H H +S+A+LHVH+NHD CLE+AVL+G +Q +AD V+ Q Sbjct: 61 VYSHGTRDLARRLTG-EGHEHGVSIASLHVHLNHDACLEVAVLRGPPARMQSYADAVVTQ 119 Query: 119 RGVRHGHLQCLPKED 133 RGVR+GHL +P+ D Sbjct: 120 RGVRYGHLHLIPEGD 134 >UniRef50_B3QCC6 Putative nickel-responsive regulator n=5 Tax=Rhodopseudomonas palustris RepID=NIKR_RHOPT Length = 147 Score = 142 bits (357), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 66/126 (52%), Positives = 88/126 (69%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M RVTITLDDDL+E LD++ RGY NRSEAIRD+ R + Q A + + Y Y Sbjct: 1 MHRVTITLDDDLMEKLDAIIAARGYQNRSEAIRDLARIGIQQTAAETTSGHCVGAMVYTY 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H KRDL ++ + HHHHDLS AT+HVH++HD CLE+ +L G+ ++QHFAD + A+RG Sbjct: 61 DHSKRDLPRKLTQSFHHHHDLSRATMHVHLDHDQCLEVTILDGNASELQHFADHIFAERG 120 Query: 121 VRHGHL 126 VR+G L Sbjct: 121 VRYGRL 126 >UniRef50_Q578T1 Nickel-responsive regulator n=36 Tax=Brucella RepID=NIKR_BRUAB Length = 132 Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 66/131 (50%), Positives = 95/131 (72%), Gaps = 1/131 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG-FAVLSYV 59 MQR+TIT+DDDL+ LD + + +GY NRSEA+RD+ R+ L Q + ++ + VLSY Sbjct: 1 MQRITITIDDDLMAALDRMIEIKGYQNRSEALRDLARTGLQQASLEEGQMEACVGVLSYT 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H RDL+ ++ +T H HH++SVA++HVH++HD CLE+++LKG DV+HFAD V A+R Sbjct: 61 YDHSARDLSKKLTNTHHDHHNISVASMHVHLDHDRCLEVSILKGKTDDVRHFADHVKAER 120 Query: 120 GVRHGHLQCLP 130 V HG L LP Sbjct: 121 HVTHGTLAVLP 131 >UniRef50_C5BCE8 Nickel-responsive regulator n=12 Tax=Proteobacteria RepID=NIKR_EDWI9 Length = 145 Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/134 (49%), Positives = 93/134 (69%), Gaps = 1/134 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG-FAVLSYV 59 MQRVT++LDDDL+ +D++ + Y NRSE IRD+ R+ L A + A L YV Sbjct: 1 MQRVTLSLDDDLMAEIDAIIRAGNYQNRSEVIRDLARAGLQSMAQAPSPSACCVAALFYV 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+HE R+L+ R+ T H HHDLS+A+LHVH++H CLE+++LKG G+V FA+ VIA+R Sbjct: 61 YDHESRELSKRLTRTFHDHHDLSLASLHVHLDHGSCLEVSLLKGAGGEVTRFAERVIAER 120 Query: 120 GVRHGHLQCLPKED 133 GVRHG L +P ++ Sbjct: 121 GVRHGKLVVVPGDE 134 >UniRef50_Q2Y9N4 Transcriptional regulator, CopG family n=2 Tax=Nitrosomonadaceae RepID=Q2Y9N4_NITMU Length = 153 Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 97/134 (72%), Gaps = 3/134 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGF--AVLSY 58 M+R+TI+L+D L + +S + GY NRSEA+RD++R+ + + A Q+ G+ A LSY Sbjct: 1 MERLTISLNDQLAKQFESAMHKLGYFNRSEAVRDLIRN-MIETARQEEQVDGYCIATLSY 59 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 +Y H +R+LA + STQH+HH+L+++T+HVH++HD+CLE+ +L+G + V++FA+ V A Sbjct: 60 IYNHHERELARCVTSTQHNHHNLTLSTMHVHMDHDNCLEVTILRGTIKSVKNFANLVTAT 119 Query: 119 RGVRHGHLQCLPKE 132 GVRHG L LP E Sbjct: 120 PGVRHGKLHLLPIE 133 >UniRef50_Q217C6 Transcriptional regulator, CopG family n=3 Tax=Rhizobiales RepID=Q217C6_RHOPB Length = 167 Score = 131 bits (329), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 63/125 (50%), Positives = 89/125 (71%), Gaps = 1/125 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQE-ATQQHGTQGFAVLSYV 59 M+RVT++LDDDLLE D +R+GY NRSEA+RD+LR L ++ ++ + A LSYV Sbjct: 1 MERVTVSLDDDLLEQFDGFIRRKGYMNRSEAVRDVLRDRLQEDRLSENNAPLCVACLSYV 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y H +R+LA RI QH HHDL +T+HVH++HD CLE+++++G V+ AD ++AQ Sbjct: 61 YNHHERELARRIAEIQHAHHDLIRSTMHVHLDHDSCLEVSMMEGPTIAVRELADALMAQT 120 Query: 120 GVRHG 124 GVRHG Sbjct: 121 GVRHG 125 >UniRef50_Q0A737 Transcriptional regulator, CopG family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A737_ALHEH Length = 139 Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 58/130 (44%), Positives = 91/130 (70%), Gaps = 1/130 (0%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEAT-QQHGTQGFAVLSYVY 60 +RVT++L+ L D+ +RRGYNNRSEA+RD++R AL EA ++ T VL+Y+Y Sbjct: 3 ERVTVSLESGLAAEFDNFLERRGYNNRSEAVRDLIRGALGSEALDERPDTPCVGVLTYLY 62 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H++R+LA R+ H H DL+V TLH+H++HD C+E +LKG+ ++ FA+ V+A+ G Sbjct: 63 DHKERELAKRLTEAHHAHFDLTVTTLHMHVDHDLCVEAVMLKGEAAQIEGFAESVMARPG 122 Query: 121 VRHGHLQCLP 130 ++HG L +P Sbjct: 123 IQHGRLHRIP 132 >UniRef50_A1KA89 Nickel responsive regulator protein n=8 Tax=Proteobacteria RepID=A1KA89_AZOSB Length = 160 Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 64/131 (48%), Positives = 89/131 (67%), Gaps = 3/131 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG--FAVLSY 58 M+R TI+L+D+L D+L RGY +RSEA+RD+LR L + A Q+ G G A LSY Sbjct: 1 MERFTISLEDELARDFDALIAERGYASRSEAVRDMLRREL-EAARQRRGDGGHCIASLSY 59 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 V+ H +RDL R+ QH HHDL+V+TLH H++HD+C+E +L+G V+ FAD ++AQ Sbjct: 60 VFNHHERDLGERLTGIQHDHHDLTVSTLHAHLDHDNCIESTILRGPTEAVRRFADSIMAQ 119 Query: 119 RGVRHGHLQCL 129 GVRHG L + Sbjct: 120 SGVRHGQLNLI 130 >UniRef50_D1T1S2 Transcriptional regulator NikR, CopG family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T1S2_9BURK Length = 163 Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/142 (44%), Positives = 92/142 (64%), Gaps = 10/142 (7%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL-------AQEATQQHGTQG- 52 MQR TI+LDD+L D+ R+GY NRSEA+RD++RS L A ++HG G Sbjct: 1 MQRFTISLDDELALQFDAFIARKGYGNRSEAVRDLIRSRLGCDSLGEAASGARRHGRDGS 60 Query: 53 --FAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQH 110 A +SYVY+H ++ + SR++ QH HHDL + +LH H++HD+CLE VL+G V+ Sbjct: 61 WCVASVSYVYDHHEQTVTSRVLDLQHDHHDLVITSLHTHLDHDNCLETVVLRGPTAAVRE 120 Query: 111 FADDVIAQRGVRHGHLQCLPKE 132 A+ ++A RGVRHG++ +P E Sbjct: 121 CAERLVALRGVRHGNVHLVPLE 142 >UniRef50_Q88HL5 Putative nickel-responsive regulator n=2 Tax=Pseudomonas putida RepID=NIKR_PSEPK Length = 138 Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 56/130 (43%), Positives = 86/130 (66%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 MQR+TITLD++LL+ +D +GY RSEAIRD+LR+ + + AV+SY+Y Sbjct: 1 MQRITITLDEELLDVIDRRVATQGYQGRSEAIRDLLRAGMRESEALPDDAACVAVVSYLY 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H R+L R+ T H HHDL+ +TLHVH++ CLE++VL+G+ G + + ++ +RG Sbjct: 61 DHSTRELPRRLNQTLHAHHDLTRSTLHVHLDAGHCLEVSVLQGESGRIGELSRQLMVERG 120 Query: 121 VRHGHLQCLP 130 V HG +Q +P Sbjct: 121 VEHGQVQVIP 130 >UniRef50_B8J1Q4 Putative nickel-responsive regulator n=3 Tax=Bacteria RepID=NIKR_DESDA Length = 138 Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 60/123 (48%), Positives = 81/123 (65%), Gaps = 1/123 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R ++LD DLLE D L +R+ Y NRSEAIRD++R AL +E G L+ VY Sbjct: 4 LARFGVSLDQDLLEPFDELCRRKSYPNRSEAIRDLIRKALVEEKWNS-DAHGAGTLTLVY 62 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H K DL+ R+V QH HDL V TLHVH++H +CLE+ VLKG+ ++ AD +IA RG Sbjct: 63 DHHKNDLSRRLVQIQHDDHDLIVTTLHVHLDHYNCLEVLVLKGEPKRMRALADKLIACRG 122 Query: 121 VRH 123 V+H Sbjct: 123 VKH 125 >UniRef50_Q1MPD3 Putative nickel-responsive regulator n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=NIKR_LAWIP Length = 139 Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 54/131 (41%), Positives = 86/131 (65%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R ++LD+DLL D L R+GY +RSEA+RD++R ALA++ Q + VLS VY+H Sbjct: 6 RFGVSLDEDLLNKFDKLCDRQGYPSRSEALRDMIRQALAKDILQSKDSNAAGVLSLVYDH 65 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVR 122 R+L+ +++ QH +D +ATLH+H++ +CLE+ ++KG+ G +Q AD + + RGV+ Sbjct: 66 HTRELSRKLIERQHEMYDSIIATLHIHLDRYNCLEVLIIKGNGGKIQQLADMLCSIRGVK 125 Query: 123 HGHLQCLPKED 133 G LP E+ Sbjct: 126 LGAFSFLPVEE 136 >UniRef50_Q01RT6 Putative nickel-responsive regulator n=2 Tax=Bacteria RepID=NIKR_SOLUE Length = 139 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 51/126 (40%), Positives = 81/126 (64%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R+ + +D DLL+ DSL +RGY NRSEA RD++R L ++ + +Q ++ VY Sbjct: 4 LSRIGVAIDSDLLDKFDSLIGQRGYTNRSEAFRDLIRDELVEKTWESPESQVVGTVTLVY 63 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H R L ++ QH H ++TLHVH++HD+CLE+ V++G DV+ AD +I+ +G Sbjct: 64 DHHVRLLNEKLTGIQHDFHHSILSTLHVHLDHDNCLEVLVVRGRSADVRKVADVLISTKG 123 Query: 121 VRHGHL 126 V+HG L Sbjct: 124 VKHGRL 129 >UniRef50_A3V7Y8 Transcriptional regulator, CopG family n=2 Tax=Alphaproteobacteria RepID=A3V7Y8_9RHOB Length = 154 Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 56/130 (43%), Positives = 79/130 (60%), Gaps = 2/130 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M+R+T+TLDDDLL +D+ G NRSEAIRD++ ALA +A F + SY Sbjct: 1 MKRITMTLDDDLLAAVDAHMDASGATNRSEAIRDLVARALAPQAPSDAAC--FGIASYTV 58 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 E + RDLA ++ + HHD A L V ++H LE+AVLKG + +V+ A+ + +RG Sbjct: 59 EPDIRDLARKVPQVRQDHHDQFAAALSVPVDHATSLEVAVLKGSVAEVETIANALFLERG 118 Query: 121 VRHGHLQCLP 130 VRHG L +P Sbjct: 119 VRHGRLALVP 128 >UniRef50_Q727G4 Putative nickel-responsive regulator n=21 Tax=cellular organisms RepID=NIKR_DESVH Length = 139 Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 52/124 (41%), Positives = 78/124 (62%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R ++LD +LL+ D L R Y RSEAIRD++R+ L Q+ + + L+ VY+H Sbjct: 6 RFGVSLDSELLDKFDVLCDERCYQTRSEAIRDLIRNTLVQQEWEDTDREIAGTLTLVYDH 65 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVR 122 K DLA R+ QH HD+ + +LHVH++H +CLE+ VLKG V++ A +I+ +GV+ Sbjct: 66 HKSDLAQRLTEIQHDVHDIIITSLHVHLDHYNCLEVLVLKGPGQQVRNLAQRLISTKGVK 125 Query: 123 HGHL 126 HG L Sbjct: 126 HGKL 129 >UniRef50_Q2IN94 Putative nickel-responsive regulator n=9 Tax=Deltaproteobacteria RepID=NIKR_ANADE Length = 139 Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/128 (41%), Positives = 83/128 (64%), Gaps = 2/128 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA-TQQHG-TQGFAVLSY 58 ++R+ I+L+D LLE D L +GY NRSEA+RD++R AL Q A T+ G + AV++ Sbjct: 2 LERIGISLEDGLLEQFDKLIAEKGYVNRSEAVRDLIRDALVQRAFTESSGREERVAVVTL 61 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 VY+H+ LA ++ QH +H V+ LHVH++ +CLE+ VL+G DV + ++A Sbjct: 62 VYDHDSSSLAQKLAHIQHENHRAVVSALHVHMDAHNCLEVLVLRGRGKDVVAMGESLVAT 121 Query: 119 RGVRHGHL 126 +GV++G L Sbjct: 122 KGVKYGKL 129 >UniRef50_A3K349 Transcriptionalregulator, CopG family protein n=1 Tax=Sagittula stellata E-37 RepID=A3K349_9RHOB Length = 155 Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 81/133 (60%), Gaps = 2/133 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 MQR TI ++DDLL LD +R G NRSEAIR +LR +L ++ Q+ + V+SY Sbjct: 1 MQRTTIAIEDDLLAELDQQLERSGAINRSEAIRALLRRSLTRDTPQE--VECIGVVSYTL 58 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + R+L R+ T H HD +VA L V ++H + +E+ V+ G + DV+ A + A+RG Sbjct: 59 DFSARELGRRVPHTCHSSHDQAVAALSVPLDHTNAMEVTVMSGRVADVEDDAHGLFAERG 118 Query: 121 VRHGHLQCLPKED 133 +RHG L +P +D Sbjct: 119 IRHGQLSLVPVKD 131 >UniRef50_Q2VNK9 Probable nickel responsive regulator n=1 Tax=Methylocapsa acidiphila RepID=Q2VNK9_METAI Length = 139 Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 49/105 (46%), Positives = 71/105 (67%), Gaps = 1/105 (0%) Query: 23 RGYNNRSEAIRDILRSALAQEATQQ-HGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDL 81 RGY+NRSEA+RD+ R+ + Q + + A L YVY+H R+LA R+ H HHDL Sbjct: 4 RGYHNRSEAMRDLARAGMQQAGVESSEAGECVAALVYVYDHTVRELAKRLADAHHAHHDL 63 Query: 82 SVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHL 126 SVA+ + ++H C+E+A+L+G G V+ FA+ +IA+RGVRHG L Sbjct: 64 SVASTQIRLDHASCMEVALLRGVTGTVRQFAEHLIAERGVRHGRL 108 >UniRef50_B3E7G1 Putative nickel-responsive regulator n=22 Tax=cellular organisms RepID=NIKR_GEOLS Length = 139 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 50/126 (39%), Positives = 80/126 (63%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R I++D DLL++ D L R+GY NRSEAIRD++R+ + +E + ++ VY Sbjct: 4 ITRFGISIDSDLLDSFDRLITRKGYQNRSEAIRDLIRATIVEEKMDAGHEEMVGTVTMVY 63 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 H RDLA ++ QH HH ++ LHVH++ +CLE+ VLKG +++ AD+++ +G Sbjct: 64 NHHVRDLADKLTEHQHQHHHQVISALHVHLDAHNCLEVLVLKGSSAEIKQIADELLGVKG 123 Query: 121 VRHGHL 126 V+HG L Sbjct: 124 VKHGKL 129 >UniRef50_B5YAK0 Putative nickel-responsive regulator n=2 Tax=Dictyoglomus RepID=NIKR_DICT6 Length = 135 Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 81/126 (64%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R +++++DLLE D + + +GYN+RSEAIRD++R + +E + +S +YEH Sbjct: 6 RFGVSVEEDLLENFDKIIENKGYNSRSEAIRDLMRDYIIKEKWNIKSEKVAGSISLIYEH 65 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVR 122 + L+ ++ QHH+HD+ ++TLHVH++ +C+E+ +++G + ++ +++ + + VR Sbjct: 66 DVYGLSEKLTDIQHHYHDVIISTLHVHLDEKNCMEVILVRGKVEKIKKLYNEISSLKWVR 125 Query: 123 HGHLQC 128 H ++ Sbjct: 126 HTNISI 131 >UniRef50_Q6AS54 Putative nickel-responsive regulator n=3 Tax=Deltaproteobacteria RepID=NIKR_DESPS Length = 136 Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 78/127 (61%), Gaps = 3/127 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALA-QEATQQHGTQGFAVLSYV 59 ++R +I+LDD+LLE D + YNNRSEAIRD++R +E + G V+S + Sbjct: 2 LKRFSISLDDNLLEIFDQHIAEKAYNNRSEAIRDLIRKNFVLKEWEEDRDVMG--VISLI 59 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H + L ++ QH H V+T HVH++HD+CLE+ ++KG GDV AD + A + Sbjct: 60 YDHHQSQLQKKVTDLQHDFHHHIVSTTHVHMDHDNCLEVIIVKGRAGDVIELADGLAALK 119 Query: 120 GVRHGHL 126 GVR +L Sbjct: 120 GVRDSNL 126 >UniRef50_B4S8H9 Putative transcriptional regulator, CopG family n=2 Tax=Chlorobiaceae RepID=B4S8H9_PROA2 Length = 147 Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 3/127 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH-GTQGFAVLSYV 59 M+R ++L+D+LLE LDSL Q + NRS+AIR ++R E + + G VL V Sbjct: 1 MKRFGVSLEDELLEQLDSLVQHHRFPNRSQAIRYLIRKHNRDEYWESNEAVCGCLVL--V 58 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H + DL R+ S QH H+L + + HVH++H++CLE LKG D+ AD +IA + Sbjct: 59 YDHHRSDLQKRLTSIQHEFHNLVLCSQHVHLDHNNCLETITLKGKAIDIGELADRLIALK 118 Query: 120 GVRHGHL 126 G+ HG L Sbjct: 119 GIVHGEL 125 >UniRef50_A4G0H7 Putative nickel-responsive regulator n=11 Tax=Methanococcales RepID=NIKR_METM5 Length = 141 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 79/131 (60%), Gaps = 3/131 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG--FAVLSY 58 M R++I+L +LL D + + RGY +RSEAIRD +R L + H +G +S Sbjct: 4 MDRISISLPTNLLAEFDEIIEERGYASRSEAIRDSIRDYLIKHK-WIHSLEGDRAGTISI 62 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 +Y+H D+ ++ + QH + L VAT+H+H++HD C+E+ ++KGD +++ D + +Q Sbjct: 63 IYDHHSTDVMEKLTNIQHDYEKLIVATIHMHLDHDHCMEVVLVKGDASEIKELTDKLTSQ 122 Query: 119 RGVRHGHLQCL 129 +GV+ L + Sbjct: 123 KGVKQVKLTVM 133 >UniRef50_B1M926 Putative transcriptional regulator, CopG family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M926_METRJ Length = 153 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 1/131 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG-FAVLSYV 59 MQR+T+TLD +L+E +D +++ R Y RSEA+RD+LR LA+ ++ A ++V Sbjct: 1 MQRITVTLDHELVEAVDRIAEVRCYAGRSEAMRDLLRRGLAEARRERDPDHACVATFTFV 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 E RDL R+ Q HDL + + V ++H+ L VL+G + ++ F D + QR Sbjct: 61 AEAGVRDLGQRLAEEQRARHDLVITQVQVPLDHEAALHTLVLRGRVREIHAFVDAIATQR 120 Query: 120 GVRHGHLQCLP 130 GVRH L +P Sbjct: 121 GVRHDSLSIIP 131 >UniRef50_C7MLI8 Predicted transcriptional regulator with CopG/Arc/MetJ DNA-binding domain protein and metal-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MLI8_CRYCD Length = 140 Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 74/127 (58%), Gaps = 1/127 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYN-NRSEAIRDILRSALAQEATQQHGTQGFAVLSYV 59 + R ++ + +DLL D L RRG + NRSE IRD++R AL + G + L+ V Sbjct: 5 LMRFSVAMPEDLLIEFDQLVARRGLSKNRSEVIRDLVREALVEAECATPGCEVMGTLTIV 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 + H DL R+ QHH+ + +++ HVH++ CLE+ +++G+ G VQ +D ++ + Sbjct: 65 FNHHANDLRDRLDDIQHHYVENIISSTHVHLDEHSCLEVIIMRGETGLVQGISDMILGTK 124 Query: 120 GVRHGHL 126 GV+ G L Sbjct: 125 GVKTGRL 131 >UniRef50_Q8TQZ1 Putative nickel-responsive regulator 1 n=7 Tax=Methanomicrobia RepID=NIKR1_METAC Length = 140 Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 77/134 (57%), Gaps = 1/134 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ-EATQQHGTQGFAVLSYV 59 + R+ I+L D LL D + +RGY++RSE IRD +RS ++ E +++V Sbjct: 5 LMRIGISLPDILLGEFDEIIGKRGYSSRSEGIRDAIRSYISYYEWMNDIKGHRVGTIAFV 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H KR L++ + QHH+ L +++HVH++H +C E+ VL GD ++ ++ ++ + Sbjct: 65 YDHTKRGLSNSLTDIQHHYSHLIKSSIHVHLDHKECFEVVVLNGDGKEIAELSETMMVLK 124 Query: 120 GVRHGHLQCLPKED 133 GV+ L + + Sbjct: 125 GVKFSKLTTVASNE 138 >UniRef50_D0WH84 Toxin-antitoxin system protein n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WH84_9ACTN Length = 211 Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 77/127 (60%), Gaps = 1/127 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGY-NNRSEAIRDILRSALAQEATQQHGTQGFAVLSYV 59 + R ++ + +DLL D L RG NRSE +RD++R ALA +A+ + G + L+ V Sbjct: 5 LMRFSVAMPEDLLVEFDKLVATRGLAKNRSEVVRDLVREALAGQASGEPGEEVMGTLTIV 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 + H D+ ++ S QH D + ++HVHI+H+ C+E+ +L+G+ +Q ++ ++ + Sbjct: 65 FNHHASDVREKLDSIQHDCLDQIITSVHVHIDHELCMEVVILRGETDVIQAISNLILGTK 124 Query: 120 GVRHGHL 126 GV HG+L Sbjct: 125 GVLHGNL 131 >UniRef50_B5IB41 NikR C terminal nickel binding domain family n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IB41_9EURY Length = 135 Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 44/128 (34%), Positives = 74/128 (57%), Gaps = 1/128 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA-TQQHGTQGFAVLSYV 59 +QR +++DD LL+ D RRGY +RSEAIRD++R AL + T F ++ + Sbjct: 2 IQRFGVSIDDSLLKKFDDYIMRRGYISRSEAIRDLIRDALIENTITSDENVDVFGTITMI 61 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+HE + + +I QH + + A +HVH++ +CLE+ +L G V+ AD + + + Sbjct: 62 YDHEVKGITEKITHIQHSYVNEIRAAVHVHVDERNCLEVVILHGKSKVVREIADKLGSLK 121 Query: 120 GVRHGHLQ 127 GV++ Q Sbjct: 122 GVKNLKFQ 129 >UniRef50_D2RI63 Transcriptional regulator NikR, CopG family n=3 Tax=Euryarchaeota RepID=D2RI63_ARCPR Length = 137 Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 76/127 (59%), Gaps = 1/127 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ-EATQQHGTQGFAVLSYV 59 + R+ ++L +LLE DS+ + RGY++RSEAIRD +R+ + + + ++ + V+ + Sbjct: 5 ITRIGVSLPKNLLEEFDSIIKTRGYSSRSEAIRDAIRNYIMEYKWLEREEGEIVGVVYII 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H + ++ I+ QH D+ T+H+H++ D CLEI ++KGDM V+ D + Sbjct: 65 YDHTVKGVSDAIIDLQHEFLDVITTTMHIHLSKDYCLEIILVKGDMKKVKALVDKATTIK 124 Query: 120 GVRHGHL 126 GV + L Sbjct: 125 GVMNVKL 131 >UniRef50_Q1H065 Transcriptional regulator, CopG family n=4 Tax=Proteobacteria RepID=Q1H065_METFK Length = 156 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 74/127 (58%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R++I+L D+L LD + RG+ +RS+AI D+LR LA+ ++ ++ +Y + Sbjct: 13 RISISLPDELHAELDIMVAERGFESRSQAINDMLRQYLAEHQREKGNEVMVGTITLLYNN 72 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVR 122 R L I Q+ H D +++LHVH+ + +E+ +++G DVQ AD++IA RGV Sbjct: 73 ATRGLQKTIADLQYQHVDEVISSLHVHLTDNQTMEVILVQGPAQDVQKIADELIALRGVT 132 Query: 123 HGHLQCL 129 G LQ + Sbjct: 133 TGRLQLM 139 >UniRef50_C7N0Q2 Predicted transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N0Q2_SLAHD Length = 172 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 78/128 (60%), Gaps = 1/128 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGY-NNRSEAIRDILRSALAQEATQQHGTQGFAVLSYV 59 + R ++ + +DLL D L RG NRSE +RD++R ALA+++ + G + L+ V Sbjct: 5 LMRFSVAMPEDLLMDFDKLVATRGLAKNRSEVVRDLVRDALAEQSCDRPGEEVMGTLTIV 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 + H D+ ++ S QH + + V ++HVH++H+ C+E+ +L+G+ V+ ++ ++ + Sbjct: 65 FNHHTNDVREKLDSIQHDYLEQIVTSVHVHMDHELCMEVIILRGENDVVRTISNRIVGTK 124 Query: 120 GVRHGHLQ 127 GV HG+L Sbjct: 125 GVLHGNLS 132 >UniRef50_C1SLF1 Predicted transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLF1_9BACT Length = 138 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 76/126 (60%), Gaps = 1/126 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R++I++++ LLE + + + +RSE I+ ++RS L ++ GT A LS VY Sbjct: 4 VSRISISIEETLLEKFEKFLEDNNFPSRSEGIKYLIRSLLVEQEWAA-GTNIAASLSIVY 62 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H K L ++VS QH L V + HVH++H +C+E+ VLKGD +V+ +++ +G Sbjct: 63 DHHKSGLMEKLVSIQHDFEQLVVCSQHVHLDHLNCMEVLVLKGDAAEVKELHTRLMSVKG 122 Query: 121 VRHGHL 126 ++H L Sbjct: 123 LKHCSL 128 >UniRef50_A0B6X8 Putative nickel-responsive regulator n=4 Tax=Euryarchaeota RepID=NIKR_METTP Length = 140 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 75/127 (59%), Gaps = 1/127 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ-EATQQHGTQGFAVLSYV 59 + R+ ++L + LL D + +RGY++RSE IRD +R+ + E + V++ V Sbjct: 5 LMRIGVSLPEKLLSRFDEIISQRGYSSRSEGIRDAIRNYIIHYEWMSDVEGERVGVITIV 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y H +R L + QH + ++LHVH++ D+CLE+ +L+G+ DV+ A+ ++A + Sbjct: 65 YSHHQRGLVDSLTDIQHEFGSIINSSLHVHLDKDNCLEVVILRGEGKDVRRAAERMMALK 124 Query: 120 GVRHGHL 126 GV+H L Sbjct: 125 GVKHVKL 131 >UniRef50_Q8PZ28 Putative nickel-responsive regulator 1 n=9 Tax=Archaea RepID=NIKR1_METMA Length = 146 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 76/127 (59%), Gaps = 1/127 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALA-QEATQQHGTQGFAVLSYV 59 + R+ ++L D LL D + ++RGY++RSEAIRD +RS ++ E + + Sbjct: 5 LMRIGVSLPDTLLGKFDEIIEKRGYSSRSEAIRDSIRSYISYNEWMGNIKGHHVGTIVII 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H +R L++ + QHH+ L +++H++ + +DC EI VL+G+ ++ A+ ++A + Sbjct: 65 YDHTQRGLSNVLTDIQHHYSHLIRSSIHIYPDREDCFEIVVLEGEGKEITELAEAIMALK 124 Query: 120 GVRHGHL 126 GV+ L Sbjct: 125 GVKLSKL 131 >UniRef50_C6XCC3 Transcriptional regulator NikR, CopG family n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCC3_METSD Length = 157 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 75/129 (58%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R++I+L D+L LDS+ RG+ +RS+AI D+LR LA+ ++ ++ +Y Sbjct: 10 VNRISISLPDELHAELDSMVIERGFESRSQAINDMLRQHLAEHKREKGNEVMVGTITILY 69 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + R L I Q+ H D +++LHVH+ + +E+ +++G VQ A+++IA RG Sbjct: 70 NNGTRGLQKTIADLQYQHLDEVISSLHVHLADNQTMEVILVQGPALTVQAVANEIIALRG 129 Query: 121 VRHGHLQCL 129 V G LQ + Sbjct: 130 VITGKLQLM 138 >UniRef50_O29515 Putative nickel-responsive regulator n=1 Tax=Archaeoglobus fulgidus RepID=NIKR_ARCFU Length = 138 Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 74/127 (58%), Gaps = 1/127 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ-EATQQHGTQGFAVLSYV 59 + R+ ++L +LL+ D + RGY++RSEAIRD +R+ + + + + VL + Sbjct: 5 ITRIGVSLPKNLLDEFDRIISTRGYSSRSEAIRDAIRTYITEYRWLESEKGEIVGVLVVL 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H + ++ ++ QH H++ ++ H+H+N D CLE+ ++KG M ++ D + A R Sbjct: 65 YDHHVKGVSDLLIDLQHDFHEIITSSTHIHLNEDQCLEMILVKGKMERIKVLVDKISAAR 124 Query: 120 GVRHGHL 126 GV + L Sbjct: 125 GVMNVKL 131 >UniRef50_C6P2L7 Putative transcriptional regulator, CopG family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2L7_9PROT Length = 169 Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 73/127 (57%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 RV+I+L LL LDS+ + RGY +RS+AI +++ L++ ++ +Y+ Sbjct: 15 RVSISLPPPLLNELDSMVESRGYESRSQAIGEMVNYQLSEHKRTLGNEVMVGTITLLYDR 74 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVR 122 RDL ++ Q+ H + +++LHVH+ D +E+ +++G ++Q A+++I RG+ Sbjct: 75 LTRDLQKKLADMQYKHINEVISSLHVHLTEDQMMEVILVQGPAAELQAVANEMITLRGII 134 Query: 123 HGHLQCL 129 G LQ L Sbjct: 135 TGRLQLL 141 >UniRef50_C6QSD1 Putative transcriptional regulator, CopG family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QSD1_9BACI Length = 146 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 2/125 (1%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R ++ LLE D + +GY NRSEAIRD+ R A+ + + V+ VY H Sbjct: 9 RFGVSFPASLLEQFDQYIKEQGYTNRSEAIRDLARKAIIEPSRLNPDDNVAGVIIMVYNH 68 Query: 63 EKRDLASRIVSTQH-HHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 DL + + QH HHD+ ++T+H+H+NH CLE+ V++G + +++ + Q+GV Sbjct: 69 HISDLPIFLKNVQHEFHHDI-ISTMHIHLNHTQCLEVVVVRGKLVNLRSLHQQIQVQKGV 127 Query: 122 RHGHL 126 + + Sbjct: 128 FYAEM 132 >UniRef50_A6G2I6 Nickel responsive regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G2I6_9DELT Length = 126 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 70/112 (62%) Query: 13 LETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIV 72 ++ D + G+ NRSEA+RD++R+ L +E + + A ++ +Y+H KR L+ +I Sbjct: 1 MDRFDRFVENSGHGNRSEAVRDLIRARLVEEEWGEGAEEAVASVTLIYDHAKRRLSRQIE 60 Query: 73 STQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHG 124 H HHD+ ++++H+H++ CLE+ VL+G +++H A+ +I GV HG Sbjct: 61 EHGHEHHDVVLSSMHIHVSEHACLEVVVLRGHPDEIKHVANHLIGLPGVLHG 112 >UniRef50_UPI00016C3510 nickel responsive regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3510 Length = 149 Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 71/126 (56%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R +++L+ DLL D + + RSEAIR +LR L ++A A L+ VY Sbjct: 4 LTRFSVSLEADLLGAFDKYVRDGAFATRSEAIRQLLRQTLTRDAFDADDAPVTATLTIVY 63 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H + L +++ QH H + +A++HVH++HD C+E+ VL+G +++ A + +G Sbjct: 64 DHHRPHLVEKLLDVQHDHANRVIASMHVHLDHDRCMEVIVLRGPGEALRNLAAAIRGLKG 123 Query: 121 VRHGHL 126 V G L Sbjct: 124 VHTGTL 129 >UniRef50_A8FTW2 Nickel-responsive regulator n=3 Tax=Shewanella RepID=A8FTW2_SHESH Length = 136 Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 69/124 (55%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R T++L + L + ++ Q RGY +RSE IRD+ R + + VL+ V++H Sbjct: 7 RFTVSLPESLFKEIELDQQERGYQSRSEYIRDLFRDRIVDKQWNNSKEDVVGVLTLVFDH 66 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVR 122 +R L+ +++ QH+H + + HVH++H +CLE ++KG +V + + A +GV+ Sbjct: 67 HQRGLSEKLIEIQHNHLVHVLCSTHVHVDHHNCLETIIIKGQASEVNLLVNQISALKGVK 126 Query: 123 HGHL 126 L Sbjct: 127 VARL 130 >UniRef50_D1YXH4 Putative nickel-responsive regulator n=1 Tax=Methanocella paludicola SANAE RepID=D1YXH4_METPS Length = 139 Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 77/134 (57%), Gaps = 3/134 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG--FAVLSY 58 + R+ I++ L+ D + +RGY++RSE IRD +R + E +G ++S Sbjct: 4 LARIGISVPGRLMGRFDEVIAQRGYSSRSEGIRDAIRDYIQYEKWMSK-VRGDRIGIISI 62 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 +Y +KR L S ++ +H + L + T+H +++ D+C+++ +++G+ G ++ F + ++A Sbjct: 63 LYNQDKRKLVSSLMQVRHDNSGLILTTIHKYLDKDNCMDVIIVRGEGGSIRAFTEKLMAN 122 Query: 119 RGVRHGHLQCLPKE 132 + V+H L + E Sbjct: 123 KCVKHVKLTTILPE 136 >UniRef50_B4U5P2 Putative transcriptional regulator, CopG family n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5P2_HYDS0 Length = 139 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 73/126 (57%), Gaps = 1/126 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 ++R+ IT+ +L++ +D + Y +RSE IRD++R A+ ++ + + VL +Y Sbjct: 9 VERICITIPKELVDFIDK-KVEQSYASRSEFIRDLIREAIVEDEWEDENNELIGVLVIIY 67 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H KR+L +++ QH+H+ + T H+HI+H++CLE ++KG + + + G Sbjct: 68 DHHKRELTQKLLDIQHNHYINILCTTHIHIDHNNCLETIMIKGPSQTIVETVNIIAGLNG 127 Query: 121 VRHGHL 126 V+ L Sbjct: 128 VKFAKL 133 >UniRef50_Q17Z13 Putative nickel-responsive regulator n=26 Tax=Bacteria RepID=NIKR_HELAH Length = 148 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 71/127 (55%), Gaps = 3/127 (2%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGT---QGFAVLSYV 59 R +++L +LL+ LD+ + GY++RSE +RD++R L ++ + AVL + Sbjct: 12 RFSVSLQQNLLDELDNRIIKNGYSSRSELVRDLIREKLVEDNWIEDSPDDKSKVAVLVVI 71 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H +R+L R++ QH + T H+H++ +CLE +LKG +VQ ++ R Sbjct: 72 YDHHQRELNQRMIDIQHASETHVLCTTHIHMDSHNCLETIILKGSSAEVQRLQLEIGGLR 131 Query: 120 GVRHGHL 126 GV+ L Sbjct: 132 GVKFAKL 138 >UniRef50_C3XHL4 Nickel responsive regulator n=3 Tax=Proteobacteria RepID=C3XHL4_9HELI Length = 156 Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 5/129 (3%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG----FAVLSY 58 R +++L LL+ LDS + GY +RSE IRD++R L E + ++G VL Sbjct: 18 RFSVSLPLGLLDELDSKITQNGYTSRSELIRDMIREKLVDEKWDKGESEGTKEHLGVLVL 77 Query: 59 VYEHEKRDLASRIVSTQHHHHDLS-VATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIA 117 +Y+H +R L + +H++H + + T HVH++H +CLE +LKG D++ ++ Sbjct: 78 IYDHHQRGLNQKKNEIEHNNHLVQIICTTHVHVDHHNCLETIILKGKKEDIEKLCIEIGG 137 Query: 118 QRGVRHGHL 126 GV+ L Sbjct: 138 LLGVKFAKL 146 >UniRef50_A3PPB2 Transcriptional regulator, CopG family n=3 Tax=Rhodobacter sphaeroides RepID=A3PPB2_RHOS1 Length = 157 Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 69/133 (51%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M R TITLD++L +D+ R NRSEAIRD++R LA + T V+S Sbjct: 1 MIRTTITLDEELAAEIDAHVARSAVPNRSEAIRDLVRRGLAAGPAKPADTLCIGVISCAM 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 E +L+ R+ + HD V +NH + +++ VL+ + ++ AD + +RG Sbjct: 61 EQTLPELSRRVRDARLARHDEIRFVTSVPLNHRETIDLIVLQASVSRIEELADRLSLERG 120 Query: 121 VRHGHLQCLPKED 133 VRH + +P E+ Sbjct: 121 VRHATVGLIPIEE 133 >UniRef50_A7I1P3 Putative nickel-responsive regulator n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=NIKR_CAMHC Length = 138 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 77/128 (60%), Gaps = 3/128 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL-AQEATQQHGTQGFAVLSYV 59 + R ++TL ++L + ++ + Y +RSE IRD++R + A + + AVLS V Sbjct: 4 LARFSVTLPNELFDEINKRVKNTEYPSRSEFIRDLVREKIIADKWKDDSQSDAIAVLSIV 63 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVA-TLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 Y H + +L S+++ +HH D+ +A + H+HI+ ++CLE+ L+G +++ F+ + + Sbjct: 64 YSHHQNNLVSQMLELEHHA-DVKIACSTHIHIDKENCLEMISLQGSGKNIEKFSQKIGSL 122 Query: 119 RGVRHGHL 126 +GV+ +L Sbjct: 123 KGVKFSNL 130 >UniRef50_A6L9L6 Transcriptional regulator, putative nickel responsive regulator n=6 Tax=Bacteroidales RepID=A6L9L6_PARD8 Length = 133 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 72/127 (56%), Gaps = 3/127 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQ-QHGTQGFAVLSYV 59 ++R ++L+D+LLE+LD G+ NRS+AIR ++ +A+ Q H G V+ + Sbjct: 3 LKRFGVSLEDNLLESLDQYVNENGFANRSQAIRFLIEKNVAERKWQCNHIVAGTIVI--M 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+ K++++ +I Q ++ D+ +++ +IN + CL I + G + +D + + Sbjct: 61 YDQVKKEISLKITGIQQNYKDVILSSSQYYINQNFCLHIVTVMGTAHRLTELSDKLTTIK 120 Query: 120 GVRHGHL 126 G++HG L Sbjct: 121 GIKHGKL 127 >UniRef50_Q8TV90 Putative nickel-responsive regulator n=1 Tax=Methanopyrus kandleri RepID=NIKR_METKA Length = 141 Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 4/132 (3%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ-EATQQHG-TQGFAVLSYVY 60 R +IT+ + LL+ ++ L + +RSE R LR L + E T++ G + F L+YV+ Sbjct: 10 RTSITVPEQLLQKVNELIASGYFASRSEIFRQALREYLQRIEWTERVGDEEYFGALTYVF 69 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +HE+ + +V QH D+ ++T H+H++ + CLE+ +L+G + A + RG Sbjct: 70 QHERAE--PELVKVQHEFTDVIISTTHIHVSPEKCLEVLLLQGPGKRIAELAKRIRGVRG 127 Query: 121 VRHGHLQCLPKE 132 V L + E Sbjct: 128 VEQAKLTVVSSE 139 >UniRef50_B9XA69 Putative transcriptional regulator, CopG family n=2 Tax=Verrucomicrobiales RepID=B9XA69_9BACT Length = 149 Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 68/125 (54%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R +I++ D LD + Q+RG+ NRS+ + ++R L A ++++VY H Sbjct: 10 RFSISMPGDAARGLDEMVQQRGFANRSQCLTSMVRDQLVVHAGDMGDAVMMGLITFVYNH 69 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVR 122 KR+L +R+ QH H ++ VH+ ++ L++ +++G ++ A ++ +GV Sbjct: 70 RKRNLQNRLTDIQHLHLKEIISIQLVHLENEQSLQLMLVQGPAKSLRAIAAEIFCLKGVC 129 Query: 123 HGHLQ 127 HG+LQ Sbjct: 130 HGNLQ 134 >UniRef50_O26834 Putative nickel-responsive regulator 2 n=5 Tax=Methanobacteriaceae RepID=NIKR2_METTH Length = 140 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 3/134 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALA--QEATQQHGTQGFAVLSY 58 M R++++L LL D + + RGY +RS+ IRD L+ + Q + G + +++ Sbjct: 1 MMRISMSLPKKLLNEFDEVLRDRGYQSRSKGIRDALKDYIVRYQWMNEMEGER-IGIIAV 59 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 +Y+H + + QH + + A +HVH+ CLE+ V+KGD+ ++ + ++ Sbjct: 60 IYDHHYTGVMEDLADIQHDYREYINAVMHVHMTERHCLEVIVVKGDVAKIRELTEKMMRL 119 Query: 119 RGVRHGHLQCLPKE 132 +GV H L E Sbjct: 120 KGVEHVRLTSTSTE 133 >UniRef50_C9M5I2 Toxin-antitoxin system protein n=2 Tax=Synergistaceae RepID=C9M5I2_9BACT Length = 143 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 29/119 (24%), Positives = 64/119 (53%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R + + + LL+ D ++G RSEA+R ++R + + Q + + ++ Y H Sbjct: 14 RFGVAVPESLLKLFDKRFHKQGVPTRSEALRQLIRDFVTADTWQSGQGEVYGSITITYNH 73 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 + R+ +++ QHH+ D+ + T H+H N CLE+ +L+G + V+ +++ + + + Sbjct: 74 DTREAGTKMTEIQHHYKDVILCTTHIHANERGCLEVIMLRGPVPRVKKLIEEMRSLKAI 132 >UniRef50_C1TP45 Predicted transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TP45_9BACT Length = 137 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 2/124 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALA-QEATQQHGTQGFAVLSYV 59 + R + + + LL D +R+G NRSEAIR ++R +++ T+ GT + ++ Sbjct: 6 LVRFGVAVPEGLLRDFDRQIERKGVPNRSEAIRQLIRDSISDTRWTEGKGTV-YGSVTIS 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y H R+ S + QH D+ + T HVH +HD C+E+ ++KG V+ +++ R Sbjct: 65 YNHHTREACSTLTDIQHDFGDVIICTSHVHADHDHCVEVIMVKGQASRVKALIEELSGVR 124 Query: 120 GVRH 123 + + Sbjct: 125 AINN 128 >UniRef50_B5JR54 NikR C terminal nickel binding domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JR54_9BACT Length = 143 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 2/126 (1%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFA-VLSYVY 60 +RV+IT+ +L D L +RG++NRS+AI +IL + EAT Q A ++ Y Sbjct: 6 ERVSITIPRSVLAKFDQLLVQRGFSNRSQAIAEILNREII-EATAHGEDQVMAGTITLFY 64 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + L S + Q H +++LHV + D +E+ V++G ++ A+++I +G Sbjct: 65 STRRNTLQSTLSKIQRQHIAEVISSLHVQLEDDHIMEVLVVQGPAPKLRSIANELITCKG 124 Query: 121 VRHGHL 126 V+ G L Sbjct: 125 VKTGKL 130 >UniRef50_Q5V2S1 Putative nickel-responsive regulator n=1 Tax=Haloarcula marismortui RepID=NIKR_HALMA Length = 139 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 70/134 (52%), Gaps = 1/134 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ-EATQQHGTQGFAVLSYV 59 M V+I++ D+L E +D+ + GY RSE +R+ +R+ + + E + + AV++ + Sbjct: 1 MGVVSISMPDELEERIDTFADEHGYTGRSEVVREAVRNLMGEFEDKRLEDRELMAVVTVL 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 +++E + +++ +H H + + H H+ C+E+ VL+G + D+ F V A + Sbjct: 61 FDYETTTVEEKMMHLRHDHESIVASNFHSHVGDRYCMELFVLEGQLEDISAFVGKVRATK 120 Query: 120 GVRHGHLQCLPKED 133 LP +D Sbjct: 121 DTLSVDYSVLPVDD 134 >UniRef50_A9GSQ5 Putative transcriptional regulator, CopG family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GSQ5_SORC5 Length = 140 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 1/119 (0%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R + +D LL D +GY NRSEA+RD++R+ L + A + G + A L+ VYE Sbjct: 6 RFGVAMDRALLAEFDRRITAQGYENRSEALRDLVRADLTRAALDE-GAEVAATLTLVYEP 64 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 E R+L RI + V++L V ++ L++ VLKG ++ A + +GV Sbjct: 65 EVRELVLRISELEERRAGSLVSSLLVRLDAARLLQVMVLKGRGQELSELAGQLAGAKGV 123 >UniRef50_Q18I31 Putative nickel-responsive regulator n=10 Tax=Halobacteriaceae RepID=NIKR_HALWD Length = 142 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 68/134 (50%), Gaps = 1/134 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ-EATQQHGTQGFAVLSYV 59 M V++++ ++LLE +D + GY RSE R+ R+ L + E + + +++ V Sbjct: 1 MSVVSVSMPEELLERIDQFADDHGYTGRSEVFREASRNLLEEFEDKRLENRELMGIVTVV 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 +++E ++ +++ +H H D+ + H H+ C+E+ VL+G + + F + A + Sbjct: 61 FDYETTNVEEKMMHLRHEHEDIVASNFHSHVGGHHCMELFVLEGSLETISTFVGKIRATK 120 Query: 120 GVRHGHLQCLPKED 133 LP +D Sbjct: 121 NTLTIDYSVLPVDD 134 >UniRef50_C8PGA0 Nickel-responsive regulator n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PGA0_9PROT Length = 143 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 1/125 (0%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ-GFAVLSYVYE 61 R +I+L L E LD + + + Y +RSE IRD++R + + G VL Y+ Sbjct: 11 RFSISLPTKLFEDLDEMVRAKQYLSRSEFIRDLIREKMVEGVLHGDGEDDCVGVLCIAYD 70 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 H + DL ++V +HH + V+T H HI+ C E ++ + ++ + + A +GV Sbjct: 71 HHQSDLIEQLVEIEHHANVTIVSTSHFHIDERHCFEEITMRDKISKIERLSAKIGALKGV 130 Query: 122 RHGHL 126 + L Sbjct: 131 KFSKL 135 >UniRef50_UPI0001C418D8 nickel responsive transcriptional regulator NikR n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C418D8 Length = 164 Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 9/129 (6%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRD-----ILRSALAQEATQQHGTQGFAVLS 57 R++++L LL D + + RGY +RS+ IRD ILR E V++ Sbjct: 2 RISMSLPKKLLAEFDEVLKDRGYQSRSKGIRDALSDYILRYPWMNEMEGNR----VGVIT 57 Query: 58 YVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIA 117 +Y+H + + QH + A++H+H+ H C+E+ V+ G++ ++ A+ ++ Sbjct: 58 VIYDHHFTGVMENLADIQHDCMEEINASMHIHMTHKYCMEVIVVNGNVTHIRELAERMMR 117 Query: 118 QRGVRHGHL 126 +GV H L Sbjct: 118 LKGVEHVKL 126 >UniRef50_A3DKG0 Putative transcriptional regulator, CopG family n=1 Tax=Staphylothermus marinus F1 RepID=A3DKG0_STAMF Length = 134 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 1/116 (0%) Query: 6 ITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKR 65 I L +DL L + G RS+ I++ LR + + + G + V+ VY HE R Sbjct: 9 IYLPEDLARELGECMKITGIRKRSKIIQEALRLFIVEHRWKTVG-KASGVIGVVYNHEVR 67 Query: 66 DLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 + + QH + D+ V+T+HVH++ + C+ +++GD G ++ +++ +GV Sbjct: 68 GVDEALTDIQHEYLDIIVSTVHVHLDKEKCMLAIIVRGDTGRIKELLSNIMNIKGV 123 >UniRef50_C7NP61 Transcriptional regulator NikR, CopG family n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NP61_HALUD Length = 172 Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 4/116 (3%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILR---SALAQEATQQHGTQGFAVLS 57 + RV++TL ++ + LD + Y +RSEA+RD LR + E + G V++ Sbjct: 13 LDRVSLTLPPEMTDRLDGIVTEWDYASRSEAVRDALRDFFTTYEWEGGDETRHYGTIVIA 72 Query: 58 YVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFAD 113 + ++H+ D+A R+ + QH + D+ + H+H++ D C+E V+ G G + A+ Sbjct: 73 HEHDHDS-DVAGRLQTIQHEYADVVTSVQHIHLSEDRCMETLVVDGTAGQIDELAN 127 >UniRef50_Q18EC5 Transcription regulator; probably nickel responsive regulator n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18EC5_HALWD Length = 179 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 3/126 (2%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGF--AVLSYVY 60 R+++TL DLL L+ + + YN+RSEA RD LR A E QQ G + +Y Sbjct: 29 RMSVTLPPDLLSELNQVVETGEYNSRSEATRDALR-AFVTEFNQQTRLSGTLSGTVVVLY 87 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 EHE + + QH + VA HVH++ CLE + G G ++ + G Sbjct: 88 EHEHSGVTDEMSELQHDFTETIVAVHHVHLSDHLCLESIAVDGAGGRIETLLSRIRPLEG 147 Query: 121 VRHGHL 126 VR L Sbjct: 148 VRQVKL 153 >UniRef50_A1RQZ3 Transcriptional regulator, CopG family n=4 Tax=Thermoproteaceae RepID=A1RQZ3_PYRIL Length = 132 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 5/133 (3%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 ++R++I LDD+L + ++ G NRS I S +A++ + T ++++ VY Sbjct: 2 VRRISIVLDDELYKEMERYMTEIGEVNRSRFIA----SLIAEKVGEAAKTPVASLIAIVY 57 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVI-AQR 119 +HE D+A + QH +D+ HVH++ +CLE+ GD ++ + R Sbjct: 58 DHEVGDVAKHLTEVQHDFNDIIRVATHVHLDERNCLEVIHAVGDAQRIRELTSRISRIGR 117 Query: 120 GVRHGHLQCLPKE 132 G+R+ + +P+E Sbjct: 118 GIRYLKVVNIPRE 130 >UniRef50_C7JHT8 Transcriptional regulator CopG n=7 Tax=Acetobacter pasteurianus RepID=C7JHT8_ACEP3 Length = 159 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 63/124 (50%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R++++L +L LD++ +GY +RS+AI++IL L V+ Y + Sbjct: 12 RISVSLPPGILHELDAMVAEKGYASRSQAIQNILHQELMASRKDCAEELMAGVIILFYNN 71 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVR 122 L+ ++ Q+ + +++LHV++ LE+ +++G + +Q AD + Q GV Sbjct: 72 AATGLSQKLAELQYENLAEVISSLHVNLVRRQTLEVLLVQGQVKKLQEIADQFMTQSGVI 131 Query: 123 HGHL 126 G L Sbjct: 132 SGKL 135 >UniRef50_A1RZK4 Transcriptional regulator, CopG family n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZK4_THEPD Length = 133 Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 72/121 (59%), Gaps = 6/121 (4%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M+R+++T+ D++ + L+ L++R +NRS + D + + +Q + + G + + +Y Sbjct: 1 MRRISLTVPDEVYKALEELAERTRISNRSRLVSDAIMAYASQ--SLEDGARYAGAIIVLY 58 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H + + + QH + ++S A+LH+H++ D CLE+ ++G+ G +++ + A RG Sbjct: 59 DHSRGETVYGVTDAQHDYPEIS-ASLHMHLSEDLCLEVLGVRGEGGRLKNL---ISALRG 114 Query: 121 V 121 V Sbjct: 115 V 115 >UniRef50_A2BJB5 Nickel responsive regulator n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJB5_HYPBU Length = 137 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 66/123 (53%), Gaps = 2/123 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGT-QGFAVLSYV 59 M ++I+L ++LL+ +D ++ GY +RSE IR+ LR L+Q Q+ T + +A++ + Sbjct: 1 MAVISISLPNNLLDKVDEYIEKYGYTSRSELIREALREYLSQRFPQETFTGKIYAIVVIL 60 Query: 60 YEHE-KRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 HE K + ++++T H + + H + CL IAV++ ++Q + Sbjct: 61 TNHEIKPSVDQKVINTIHSFQTIIKSFYHQLLEGSWCLNIAVVESTWNEIQALVKALRKI 120 Query: 119 RGV 121 +G+ Sbjct: 121 QGI 123 >UniRef50_A3M466 CopG n=14 Tax=Acinetobacter RepID=A3M466_ACIBT Length = 144 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 65/127 (51%), Gaps = 1/127 (0%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R++IT+ + L LD + Y +RS+AI D++ L E Q + L+ +Y+ Sbjct: 8 RISITVPESTLNALDQKIVEQNYESRSQAIVDMINKHLIAEQAQANEVM-VGTLTLLYDA 66 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVR 122 + L +++V Q +++LH+ ++ L++ +++G +++ + I +GV Sbjct: 67 SQMTLRNQLVDLQQQFLAQVISSLHIQLDQQKILQVMLMQGASSELRQISQQFIVLKGVI 126 Query: 123 HGHLQCL 129 GHL+ + Sbjct: 127 KGHLELM 133 >UniRef50_C3N649 Putative nickel-responsive regulator n=10 Tax=Sulfolobus RepID=NIKR_SULIA Length = 133 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 67/126 (53%), Gaps = 6/126 (4%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG-FAVLSYVY 60 ++++I+L +L L+ R+G +RS+ + LR+ L + + GT+ + +++ VY Sbjct: 4 EKISISLPKELYRELEDFITRKGIPDRSKIFQIALRNYLDE---NREGTEIIYGIINLVY 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +HE+ A + QH + D ++TLH+H+N C+E +KG+ + + + RG Sbjct: 61 DHEEASEA--LTEIQHEYKDNIISTLHLHVNERLCIEAIAVKGEKSKLVELNNRLGQIRG 118 Query: 121 VRHGHL 126 + L Sbjct: 119 ILKARL 124 >UniRef50_O26703 Putative nickel-responsive regulator 1 n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=NIKR1_METTH Length = 127 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 6/128 (4%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG--FAVLSY 58 M V+++L + LLE +D+L G++ RS+ IR R L E H G AVL Sbjct: 1 MVVVSVSLGEKLLEEIDALRDELGFSGRSDVIRVAAR-MLIDEKRNLHELNGEINAVLFL 59 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 ++ DL ++I +H + D+ LH H+ +CLE+ +++G+ V+ A+ +A Sbjct: 60 IHPRRVEDLVTKI---KHDYEDIIGTQLHSHLKDGNCLELFIIEGESMRVRELAERFLAC 116 Query: 119 RGVRHGHL 126 ++H L Sbjct: 117 GKMKHIKL 124 >UniRef50_Q7MS86 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MS86_WOLSU Length = 78 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 43/72 (59%) Query: 55 VLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADD 114 +L+ VY+H +R+L +++ QH+ H + HVHINH +CLE +LKG +++ A Sbjct: 1 MLTIVYDHHQRELNQKMIDIQHNSHIHILCNTHVHINHHNCLETIILKGIPKEIEEIALS 60 Query: 115 VIAQRGVRHGHL 126 + +GV+ L Sbjct: 61 IGGLKGVKFSKL 72 >UniRef50_Q31EP2 Transcriptional regulator, CopG family n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EP2_THICR Length = 157 Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 68/126 (53%), Gaps = 4/126 (3%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQ-HGTQGFA-VLSYVY 60 R + +L +LE LD L RG+NNRS + +I++ ++ A QQ H + A L+ VY Sbjct: 10 RTSASLPAKVLEDLDKLVIDRGFNNRSALLAEIIQREVS--AYQQDHTNEVMAGTLTLVY 67 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H L ++ +H + +++ + + + LE+ +++G D+ + +++ RG Sbjct: 68 DHAVPGLQLKLNQLKHQYVAEIISSTQIQLMNHHTLEVNLMQGPAQDLNKISHKILSNRG 127 Query: 121 VRHGHL 126 V+ G+L Sbjct: 128 VKTGNL 133 >UniRef50_D1JIB2 Putative nickel responsive regulator 1 n=2 Tax=environmental samples RepID=D1JIB2_9ARCH Length = 127 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 6/111 (5%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALA--QEATQQHGTQGFAVLSY 58 M ++I+L D++L +D L + G++ RSE +R R LA +E + G +VL Sbjct: 1 MAIISISLTDEILNEIDRLQKELGFSGRSEVMRAGARMLLADNREKEKLEGMLN-SVLLL 59 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQ 109 ++ + D + I +H D+ +H H+ D C+E+ +L+GD ++ Sbjct: 60 IHAQKVEDTVTAI---KHEFEDIISTQIHNHLREDKCIEVFILEGDAARIK 107 >UniRef50_Q58177 Uncharacterized transcriptional regulator MJ0767 n=9 Tax=Methanococcales RepID=Y767_METJA Length = 135 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/120 (23%), Positives = 60/120 (50%), Gaps = 7/120 (5%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 ++R++I+ LL+ +D + +++GY++RSE IRD +R + + ++ VY Sbjct: 4 VERISISFPKFLLKEIDEVVKKKGYSSRSELIRDAVRKYVLENNPLNKNETVSGIIIVVY 63 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDC-----LEIAVLKGDMGDVQHFADDV 115 K L +S + H+ + +L+ C +EI V++G+ D+ F +++ Sbjct: 64 NPTKEALEK--MSKLYFEHNKVIKSLNQAYVTTSCGKNAKVEIFVVEGNSKDISKFYEEI 121 >UniRef50_C7NX71 Transcriptional regulator NikR, CopG family n=2 Tax=Halobacteriaceae RepID=C7NX71_HALMD Length = 136 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 1/104 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL-AQEATQQHGTQGFAVLSYV 59 + R+++TL ++ LD + Y++RSEAIRD LR A E T + V Sbjct: 5 LDRISLTLPAEMTTRLDDIVDDWEYDSRSEAIRDALRDFFGAYEWESADDTVHHGTVVVV 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKG 103 ++H +A ++ + QH DL + H+H++HD C+E V++G Sbjct: 65 HDHHVDGIADQLQTIQHEMADLITSVQHIHLSHDTCMETLVVEG 108 >UniRef50_B9Z9H3 Putative transcriptional regulator, CopG family n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9Z9H3_NATMA Length = 136 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 2/133 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFA-VLSYV 59 M +++++ +L++ LDS+++R GY RSE +R+ R L + + Q A +S Sbjct: 1 MPVISVSMPAELIDRLDSVAERHGYTGRSEVVREGSRVLLTEFEDDRPANQQLAGTVSVF 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 + E + + + + +H + D + H H+ D CL++ VL+ ++ + A Sbjct: 61 SDFETQPIERELTALRHEYEDSIASITHSHVG-DSCLDVLVLETARDELATVVGKLRAID 119 Query: 120 GVRHGHLQCLPKE 132 GV+ +P E Sbjct: 120 GVQTVEYSLVPLE 132 >UniRef50_Q3ITC6 Probable transcription regulator n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3ITC6_NATPD Length = 137 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 3/122 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGT-QGFAVLSYV 59 M V++++ LL+ LD Y+ RSEA+R+ R L + Q T +++ + Sbjct: 1 MPVVSVSMPASLLDRLDEFIDEHDYSGRSEAVREGTRKVLTEFDDQSVPTSPAVCIVAVM 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 ++H+ D S + + +H H +L + +H H + CLE+ V +G++ + F V Sbjct: 61 FDHDT-DAESSLSTLRHEHDELVTSNVHSHAG-EACLELFVAEGEVDAIGTFVSRVRTVD 118 Query: 120 GV 121 GV Sbjct: 119 GV 120 >UniRef50_Q2GAR7 Transcriptional regulator, CopG family n=2 Tax=Alphaproteobacteria RepID=Q2GAR7_NOVAD Length = 158 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ-EATQQHGTQGFAVLSYV 59 + R++++L +L LD + + RG +RS+ I +++R ALA+ EA + ++ V Sbjct: 8 LARLSMSLPGELFRQLDMMVEERGLPSRSQLIAELIRHALAEHEAYTRPDEMLAGTITIV 67 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y ++ + ++ TQ + +++ HV + D LE+ +++G ++ D + R Sbjct: 68 YRGDRGRVRHQLAQTQADYLKEVISSQHVFLEDDQSLEVLLVQGPAVRLKELCDALRRVR 127 Query: 120 GV 121 GV Sbjct: 128 GV 129 >UniRef50_C5SGL4 Putative transcriptional regulator, CopG family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SGL4_9CAUL Length = 169 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 62/122 (50%), Gaps = 1/122 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFA-VLSYV 59 + R++++L LL++ D + RG +RS A+ +++R A+A+ A +Q A ++ V Sbjct: 9 LARLSMSLPGSLLDSFDKMVADRGLPSRSSAMTELIRGAVAEHAERQRPDDVVAGTVTLV 68 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y + + R+ Q +++ HV + +D LE+ +++G ++ D R Sbjct: 69 YASDSGTVRHRVAQKQLDFLKEVISSQHVFLENDQSLEVLLVQGPPSQLEDLCDGFRRIR 128 Query: 120 GV 121 G+ Sbjct: 129 GM 130 >UniRef50_B8GWH5 Nickel-responsive regulator NikR n=2 Tax=Caulobacter vibrioides RepID=B8GWH5_CAUCN Length = 162 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/126 (22%), Positives = 63/126 (50%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R++I+L +L+ LD++ RG +RS+ I +++R LA+ + ++ ++ +Y Sbjct: 11 LARLSISLPAELMVQLDAMVAERGLPSRSQMIAELIRHELAEHSGERPDAMLAGTITLIY 70 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 E + + TQ + ++ +V + D +E+ +++G +Q D + RG Sbjct: 71 RAESGRVRHALAQTQLGYVKEVISAQNVFLEDDQAMEVLLVQGPAERLQQLCDALRKVRG 130 Query: 121 VRHGHL 126 V+ L Sbjct: 131 VQQIKL 136 >UniRef50_A4YI93 Transcriptional regulator, CopG family n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YI93_METS5 Length = 128 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 6/103 (5%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 ++++++ LD + L L ++ G + RS I+ + LA+ + + F +L+ VY Sbjct: 3 VEKISVALDKETLRRLQRRAEDEGVS-RSRLIQMAVSEYLAEFTGEDE--EVFGILNLVY 59 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKG 103 E + D I S +H H ++TLHVH+N C+E +KG Sbjct: 60 EEDGSD---EITSVEHQHEASIISTLHVHVNEKLCMEAIAVKG 99 >UniRef50_B1L5X4 Putative transcriptional regulator, CopG family n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L5X4_KORCO Length = 136 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 23/126 (18%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLS--- 57 + R I++ +L+ LD L + +RS+AI EA + + + VLS Sbjct: 6 VSRTAISIPRELMSDLDDLLSQLNLKSRSKAI---------SEAITLYIAERYWVLSDVE 56 Query: 58 --------YVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQ 109 VY+H K S I QH + DL +T HVHI+ + C+E+ ++ G + V+ Sbjct: 57 KEVAGAIIMVYDHHKE---SEITEVQHKYLDLIRSTSHVHIDEERCMEVLMVLGSLSRVR 113 Query: 110 HFADDV 115 ++ Sbjct: 114 ELFKEL 119 >UniRef50_D2RX96 Transcriptional regulator NikR, CopG family n=4 Tax=Halobacteriaceae RepID=D2RX96_9EURY Length = 132 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 2/107 (1%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R + + D+LL D Q G+++RS A+R+ ++ + + T+ G + +++ Sbjct: 2 RTSFNIPDELLAEFDRTWQTEGFDSRSRAVREAMQEYI-ESHTELETVSGDVTTALAFDY 60 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQ 109 + D+ + QH D+ T H H D CLE +G+ V+ Sbjct: 61 QHEDVIRELHDVQHDFQDVITTTSHTH-EGDWCLETIFCRGEAARVR 106 >UniRef50_B8D4E8 Putative transcriptional regulator, CopG family n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D4E8_DESK1 Length = 141 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 2/120 (1%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +++ I L DL E + +R G + S +++ LR+ L E G+ ++ +Y+ Sbjct: 13 RKIGIYLPGDLEELVIEYLKRHGGRSISSLVQEALRTYLMSEEIPGCNLVGYIMV--LYK 70 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 H D+ + QH + + H+HI+ + CL +G D + V + RG+ Sbjct: 71 HGMGDIDRELTEIQHEYIGSVLFENHIHIDEERCLMTIAFRGRYSDFESLMKKVRSLRGM 130 >UniRef50_D2RV27 Transcriptional regulator NikR, CopG family n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RV27_9EURY Length = 160 Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFA-VLSYV 59 M V++++ DL++ LD+ + Y RSE +R+ R+ LA+ + + A V+S Sbjct: 1 MPIVSVSMPADLIDRLDTHAADHDYTGRSEVVRESARTLLAEFEDDRLEDRPLAGVVSVF 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINH 92 YE + + R+ +H + D+ +T H H+ Sbjct: 61 YEFGSQRVERRVTELRHEYDDVVASTDHGHVGE 93 >UniRef50_Q5V799 Transcriptional regulator n=3 Tax=Halobacteriaceae RepID=Q5V799_HALMA Length = 135 Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 4/108 (3%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL-AQEATQQHGTQGFAVLSYVYE 61 R ++ + +D+LE D Q G ++RS AIR+ ++ + ++ + AVL++ Y+ Sbjct: 2 RTSLNVSEDILEEFDETWQAEGLDSRSRAIREAMQEYIEGHSQLEEVSGEVVAVLAFDYQ 61 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQ 109 H ++ + S QH D+ H H + CLE GD V+ Sbjct: 62 H--HEVIHDLHSAQHQFQDVIETMSHTH-QGEWCLETVFCHGDAARVR 106 >UniRef50_C6A437 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain n=10 Tax=Thermococcaceae RepID=C6A437_THESM Length = 63 Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 13/73 (17%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M+ +++ L L+ LD L +R Y NRSEAIR+ +R + +E YV Sbjct: 4 MKIISVQLPQGLINALDVLVRRGVYPNRSEAIREAIRELVKREL-------------YVM 50 Query: 61 EHEKRDLASRIVS 73 E E+R++ +V Sbjct: 51 ESEEREIPEYVVK 63 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q727G4 Putative nickel-responsive regulator n=21 Tax=ce... 171 4e-42 UniRef50_Q01RT6 Putative nickel-responsive regulator n=2 Tax=Bac... 168 7e-41 UniRef50_B5R3Y5 Nickel-responsive regulator n=96 Tax=Enterobacte... 167 1e-40 UniRef50_A4G0H7 Putative nickel-responsive regulator n=11 Tax=Me... 166 2e-40 UniRef50_B8J1Q4 Putative nickel-responsive regulator n=3 Tax=Bac... 166 3e-40 UniRef50_Q1MPD3 Putative nickel-responsive regulator n=1 Tax=Law... 166 3e-40 UniRef50_Q8TQZ1 Putative nickel-responsive regulator 1 n=7 Tax=M... 161 7e-39 UniRef50_B5YAK0 Putative nickel-responsive regulator n=2 Tax=Dic... 160 1e-38 UniRef50_A0B6X8 Putative nickel-responsive regulator n=4 Tax=Eur... 159 2e-38 UniRef50_Q1H065 Transcriptional regulator, CopG family n=4 Tax=P... 159 2e-38 UniRef50_C6XCC3 Transcriptional regulator NikR, CopG family n=1 ... 158 4e-38 UniRef50_D1T1S2 Transcriptional regulator NikR, CopG family n=1 ... 157 9e-38 UniRef50_Q217C6 Transcriptional regulator, CopG family n=3 Tax=R... 157 1e-37 UniRef50_C7N0Q2 Predicted transcriptional regulator with CopG/Ar... 156 1e-37 UniRef50_B9JL06 Putative nickel-responsive regulator n=2 Tax=Pro... 156 2e-37 UniRef50_B3QCC6 Putative nickel-responsive regulator n=5 Tax=Rho... 156 2e-37 UniRef50_D2RI63 Transcriptional regulator NikR, CopG family n=3 ... 155 3e-37 UniRef50_Q6AS54 Putative nickel-responsive regulator n=3 Tax=Del... 155 3e-37 UniRef50_O29515 Putative nickel-responsive regulator n=1 Tax=Arc... 154 6e-37 UniRef50_D0WH84 Toxin-antitoxin system protein n=1 Tax=Slackia e... 154 6e-37 UniRef50_C5BCE8 Nickel-responsive regulator n=12 Tax=Proteobacte... 154 1e-36 UniRef50_A1KA89 Nickel responsive regulator protein n=8 Tax=Prot... 154 1e-36 UniRef50_B3E7G1 Putative nickel-responsive regulator n=22 Tax=ce... 154 1e-36 UniRef50_B4S8H9 Putative transcriptional regulator, CopG family ... 153 2e-36 UniRef50_Q88HL5 Putative nickel-responsive regulator n=2 Tax=Pse... 153 2e-36 UniRef50_C7MLI8 Predicted transcriptional regulator with CopG/Ar... 152 2e-36 UniRef50_B1M0C3 Putative transcriptional regulator, CopG family ... 152 3e-36 UniRef50_C6QSD1 Putative transcriptional regulator, CopG family ... 152 4e-36 UniRef50_UPI00016C3510 nickel responsive regulator n=1 Tax=Gemma... 151 6e-36 UniRef50_C6P2L7 Putative transcriptional regulator, CopG family ... 151 7e-36 UniRef50_B5IB41 NikR C terminal nickel binding domain family n=1... 150 1e-35 UniRef50_Q8PZ28 Putative nickel-responsive regulator 1 n=9 Tax=A... 150 1e-35 UniRef50_Q578T1 Nickel-responsive regulator n=36 Tax=Brucella Re... 150 2e-35 UniRef50_Q0A737 Transcriptional regulator, CopG family n=1 Tax=A... 149 3e-35 UniRef50_D1YXH4 Putative nickel-responsive regulator n=1 Tax=Met... 148 4e-35 UniRef50_Q2Y9N4 Transcriptional regulator, CopG family n=2 Tax=N... 148 4e-35 UniRef50_UPI0001C418D8 nickel responsive transcriptional regulat... 147 7e-35 UniRef50_Q2IN94 Putative nickel-responsive regulator n=9 Tax=Del... 147 1e-34 UniRef50_O26834 Putative nickel-responsive regulator 2 n=5 Tax=M... 146 2e-34 UniRef50_A8FTW2 Nickel-responsive regulator n=3 Tax=Shewanella R... 146 3e-34 UniRef50_C3XHL4 Nickel responsive regulator n=3 Tax=Proteobacter... 145 4e-34 UniRef50_C1TP45 Predicted transcriptional regulator with CopG/Ar... 144 7e-34 UniRef50_C1SLF1 Predicted transcriptional regulator with CopG/Ar... 144 7e-34 UniRef50_Q17Z13 Putative nickel-responsive regulator n=26 Tax=Ba... 142 4e-33 UniRef50_C9M5I2 Toxin-antitoxin system protein n=2 Tax=Synergist... 141 7e-33 UniRef50_A7I1P3 Putative nickel-responsive regulator n=1 Tax=Cam... 140 1e-32 UniRef50_B9XA69 Putative transcriptional regulator, CopG family ... 137 9e-32 UniRef50_B4U5P2 Putative transcriptional regulator, CopG family ... 136 2e-31 UniRef50_A6L9L6 Transcriptional regulator, putative nickel respo... 134 6e-31 UniRef50_C7JHT8 Transcriptional regulator CopG n=7 Tax=Acetobact... 134 9e-31 UniRef50_B8GWH5 Nickel-responsive regulator NikR n=2 Tax=Cauloba... 133 2e-30 UniRef50_Q8TV90 Putative nickel-responsive regulator n=1 Tax=Met... 132 2e-30 UniRef50_B5JR54 NikR C terminal nickel binding domain family n=1... 132 3e-30 UniRef50_Q2GAR7 Transcriptional regulator, CopG family n=2 Tax=A... 132 4e-30 UniRef50_Q18I31 Putative nickel-responsive regulator n=10 Tax=Ha... 132 5e-30 UniRef50_C8PGA0 Nickel-responsive regulator n=1 Tax=Campylobacte... 130 1e-29 UniRef50_A3V7Y8 Transcriptional regulator, CopG family n=2 Tax=A... 129 3e-29 UniRef50_C5SGL4 Putative transcriptional regulator, CopG family ... 127 1e-28 UniRef50_Q31EP2 Transcriptional regulator, CopG family n=1 Tax=T... 126 2e-28 UniRef50_A3K349 Transcriptionalregulator, CopG family protein n=... 126 2e-28 UniRef50_Q18EC5 Transcription regulator; probably nickel respons... 124 6e-28 UniRef50_Q5V2S1 Putative nickel-responsive regulator n=1 Tax=Hal... 124 6e-28 UniRef50_A3DKG0 Putative transcriptional regulator, CopG family ... 122 3e-27 UniRef50_A3PPB2 Transcriptional regulator, CopG family n=3 Tax=R... 122 3e-27 UniRef50_A3M466 CopG n=14 Tax=Acinetobacter RepID=A3M466_ACIBT 122 4e-27 UniRef50_B1M926 Putative transcriptional regulator, CopG family ... 121 7e-27 UniRef50_A2BJB5 Nickel responsive regulator n=1 Tax=Hyperthermus... 120 1e-26 UniRef50_C7NP61 Transcriptional regulator NikR, CopG family n=1 ... 119 3e-26 UniRef50_C3N649 Putative nickel-responsive regulator n=10 Tax=Su... 119 4e-26 UniRef50_A1RQZ3 Transcriptional regulator, CopG family n=4 Tax=T... 117 1e-25 UniRef50_B9Z9H3 Putative transcriptional regulator, CopG family ... 117 1e-25 UniRef50_A9GSQ5 Putative transcriptional regulator, CopG family ... 115 4e-25 UniRef50_A6G2I6 Nickel responsive regulator n=1 Tax=Plesiocystis... 115 5e-25 UniRef50_Q58177 Uncharacterized transcriptional regulator MJ0767... 112 3e-24 UniRef50_Q2VNK9 Probable nickel responsive regulator n=1 Tax=Met... 110 2e-23 UniRef50_B1L5X4 Putative transcriptional regulator, CopG family ... 109 2e-23 UniRef50_D2RX96 Transcriptional regulator NikR, CopG family n=4 ... 109 3e-23 UniRef50_A1RZK4 Transcriptional regulator, CopG family n=1 Tax=T... 109 4e-23 UniRef50_Q3ITC6 Probable transcription regulator n=1 Tax=Natrono... 106 2e-22 UniRef50_C7NX71 Transcriptional regulator NikR, CopG family n=2 ... 104 1e-21 UniRef50_O26703 Putative nickel-responsive regulator 1 n=1 Tax=M... 103 2e-21 UniRef50_D1JIB2 Putative nickel responsive regulator 1 n=2 Tax=e... 97 1e-19 UniRef50_Q7MS86 Putative uncharacterized protein n=1 Tax=Wolinel... 92 7e-18 UniRef50_A4YI93 Transcriptional regulator, CopG family n=1 Tax=M... 88 9e-17 Sequences not found previously or not previously below threshold: UniRef50_D2RV27 Transcriptional regulator NikR, CopG family n=1 ... 96 3e-19 UniRef50_Q5V799 Transcriptional regulator n=3 Tax=Halobacteriace... 90 2e-17 UniRef50_B8D4E8 Putative transcriptional regulator, CopG family ... 85 7e-16 UniRef50_A0RWH0 Transcriptional regulator n=3 Tax=Thaumarchaeota... 82 4e-15 UniRef50_D2RG21 Putative transcriptional regulator, CopG family ... 80 3e-14 UniRef50_A2BJM7 Putative nickel responsive regulator n=1 Tax=Hyp... 75 9e-13 UniRef50_Q60386 Uncharacterized transcriptional regulator MJ0080... 74 1e-12 UniRef50_Q9Y8R3 Nickel responsive regulator n=1 Tax=Aeropyrum pe... 71 8e-12 UniRef50_A2BJS7 Predicted transcriptional regulator, NikR n=1 Ta... 67 2e-10 UniRef50_A2BMU8 Conserved crenarchaeal protein n=1 Tax=Hyperther... 64 1e-09 UniRef50_B1L3A9 Putative transcriptional regulator, CopG family ... 64 2e-09 UniRef50_A1RWF4 Transcriptional regulator, CopG family n=1 Tax=T... 63 2e-09 UniRef50_A3MUX0 Transcriptional regulator, CopG family n=5 Tax=T... 62 5e-09 UniRef50_A3DLG8 Transcriptional regulator, CopG family n=1 Tax=S... 61 2e-08 UniRef50_UPI0000D54CF8 hypothetical protein P700755_30935 n=1 Ta... 55 8e-07 UniRef50_Q9YEP4 Putative uncharacterized protein n=1 Tax=Aeropyr... 55 9e-07 UniRef50_B1L6V8 Putative transcriptional regulator, CopG family ... 53 2e-06 UniRef50_Q8ZX60 Putative uncharacterized protein n=1 Tax=Pyrobac... 52 6e-06 UniRef50_A1RUT5 Transcriptional regulator, CopG family n=5 Tax=T... 51 1e-05 UniRef50_C0G2W8 CopG domain protein DNA-binding domain protein n... 50 3e-05 UniRef50_Q9HHW8 Vng6193h n=3 Tax=Halobacterium salinarum RepID=Q... 50 3e-05 UniRef50_C6A437 Predicted transcriptional regulators containing ... 49 3e-05 UniRef50_Q2RPB0 Predicted transcriptional regulators containing ... 49 5e-05 UniRef50_A4J8J6 Transcriptional regulator, CopG family n=6 Tax=F... 48 7e-05 UniRef50_Q9HHQ0 Vng6288c n=2 Tax=Halobacterium salinarum RepID=Q... 48 9e-05 UniRef50_Q4JBZ9 Conserved protein n=4 Tax=Sulfolobus RepID=Q4JBZ... 48 1e-04 UniRef50_D0U4G3 CopG/Arc/MetJ family n=1 Tax=uncultured SUP05 cl... 47 2e-04 UniRef50_Q7NGA1 Gll3272 protein n=1 Tax=Gloeobacter violaceus Re... 47 2e-04 UniRef50_C1V617 Transcriptional regulator, CopG family n=12 Tax=... 47 2e-04 UniRef50_D2PD24 CopG domain protein DNA-binding domain protein n... 47 2e-04 UniRef50_A1RWD2 Transcriptional regulator, CopG family n=1 Tax=T... 47 2e-04 UniRef50_Q5JJ81 Transcription regulator, CopG/RepA family n=1 Ta... 47 2e-04 UniRef50_A2BJ34 Transcriptional regulator n=6 Tax=Thermoprotei R... 47 2e-04 UniRef50_Q2RGI4 Transcriptional regulator, CopG family n=11 Tax=... 46 5e-04 UniRef50_Q6X3J4 NikR family transcriptional regulator protein-li... 45 7e-04 UniRef50_A4YIW8 Putative transcriptional regulator, CopG/Arc/Met... 45 9e-04 UniRef50_B9ZCU1 Putative transcriptional regulator, CopG family ... 44 0.001 UniRef50_D2EEU4 Nucleotidyl transferase n=1 Tax=Candidatus Parva... 44 0.002 UniRef50_C5A3Q2 Transcription regulator, copG/nikR family n=1 Ta... 44 0.002 UniRef50_C0QKL9 Putative uncharacterized protein n=1 Tax=Desulfo... 43 0.003 UniRef50_B7NEP0 Putative uncharacterized protein n=1 Tax=Escheri... 43 0.003 UniRef50_Q3IM20 Homolog to transcription regulator n=4 Tax=Halob... 43 0.003 UniRef50_Q7V1J7 Possible DnaJ domain n=1 Tax=Prochlorococcus mar... 42 0.004 UniRef50_B0TE83 Helix-turn-helix domain protein, copg family, pu... 42 0.004 UniRef50_C3N733 Putative transcriptional regulator, CopG family ... 42 0.005 UniRef50_B0RYF6 Putative uncharacterized protein n=3 Tax=Xanthom... 42 0.005 UniRef50_B5Y6F5 Ribbon-helix-helix protein, CopG family n=1 Tax=... 42 0.005 UniRef50_A1JJS5 Putative uncharacterized protein n=4 Tax=Yersini... 42 0.005 UniRef50_C7NYG6 Putative uncharacterized protein n=1 Tax=Halomic... 42 0.005 UniRef50_B8D3L5 Putative transcriptional regulator, CopG family ... 42 0.005 UniRef50_Q4KEL3 Putative uncharacterized protein n=3 Tax=Proteob... 42 0.008 UniRef50_C0ZK25 Antitoxin EndoAI n=6 Tax=Firmicutes RepID=C0ZK25... 42 0.008 UniRef50_B0SBS5 Transcriptional regulator n=2 Tax=Leptospira bif... 42 0.008 UniRef50_D2PF81 CopG domain protein DNA-binding domain protein n... 41 0.009 UniRef50_D1TR69 Toxin-antitoxin system, antitoxin component, Hic... 41 0.009 UniRef50_B5ISV0 Ribbon-helix-helix protein, copG family n=1 Tax=... 41 0.010 UniRef50_B5IWL3 Ribbon-helix-helix protein, copG family n=1 Tax=... 41 0.010 UniRef50_C7P3M0 Putative transcriptional regulator, CopG family ... 41 0.011 UniRef50_A6VCR0 Putative addiction module antidote protein, fami... 41 0.011 UniRef50_Q9F560 YcfB protein n=9 Tax=Gammaproteobacteria RepID=Q... 41 0.012 UniRef50_B2A572 Transcriptional regulator, CopG family n=3 Tax=C... 41 0.013 UniRef50_B8G285 Putative transcriptional regulator, CopG family ... 41 0.014 UniRef50_B7KL55 Putative transcriptional regulator, CopG family ... 41 0.014 UniRef50_B3T8I8 Putative Ribbon-helix-helix protein, copG family... 41 0.014 UniRef50_A3DIW8 Putative transcriptional regulator, CopG family ... 41 0.015 UniRef50_C3JNM8 Hypothetical transcriptional regulator n=1 Tax=R... 41 0.015 UniRef50_D2RGK0 Putative transcriptional regulators, CopG/Arc/Me... 41 0.015 UniRef50_Q2FN54 Transcriptional regulator, CopG family n=3 Tax=M... 41 0.017 UniRef50_A1RUY5 Putative transcriptional regulators, CopG/Arc/Me... 41 0.018 UniRef50_C7NV28 Putative transcriptional regulator, CopG family ... 40 0.020 UniRef50_C8SCV4 Putative transcriptional regulator, CopG/Arc/Met... 40 0.024 UniRef50_Q3JAU9 Helix-turn-helix protein, CopG family n=6 Tax=Ba... 40 0.025 UniRef50_A8A8K7 Putative transcriptional regulator, CopG family ... 40 0.027 UniRef50_A5KTC8 Putative transcriptional regulator, CopG family ... 40 0.028 UniRef50_B9DXM3 Putative uncharacterized protein n=3 Tax=Clostri... 40 0.029 UniRef50_B2AG39 Antitoxin of a toxin/antitoxin system n=20 Tax=r... 40 0.030 UniRef50_D2PEH6 CopG domain protein DNA-binding domain protein n... 40 0.032 UniRef50_Q18DN8 Putative uncharacterized protein n=4 Tax=Halobac... 39 0.035 UniRef50_C7NQV1 Putative uncharacterized protein n=2 Tax=Halobac... 39 0.037 UniRef50_B5INF8 Putative uncharacterized protein n=1 Tax=Cyanobi... 39 0.037 UniRef50_Q573G1 Putative zinc finger protein ORF104b n=1 Tax=Aci... 39 0.037 UniRef50_A2SRF9 Transcriptional regulator, CopG family n=2 Tax=M... 39 0.042 UniRef50_A1T480 Putative transcriptional regulator, CopG family ... 39 0.043 UniRef50_C8SLQ5 Putative addiction module antidote protein, CopG... 39 0.044 UniRef50_B4ET85 Phage protein n=27 Tax=Enterobacteriaceae RepID=... 39 0.044 UniRef50_B1YCN5 Putative transcriptional regulator, CopG family ... 39 0.047 UniRef50_Q0YTZ6 CopG-like DNA-binding n=3 Tax=Chlorobium RepID=Q... 39 0.049 UniRef50_UPI0001C31469 putative transcriptional regulator, CopG ... 39 0.049 UniRef50_C5SJ89 Putative addiction module antidote protein, CopG... 39 0.049 UniRef50_B9JBH5 CopG/Arc/MetJ DNA-binding domain-containing tran... 39 0.051 UniRef50_A2BM81 Putative uncharacterized protein n=1 Tax=Hyperth... 39 0.051 UniRef50_B5IQ88 Ribbon-helix-helix protein, copG family n=1 Tax=... 39 0.054 UniRef50_Q18EA8 Putative uncharacterized protein n=1 Tax=Haloqua... 39 0.057 UniRef50_Q18GU1 Putative uncharacterized protein n=6 Tax=Halobac... 39 0.063 UniRef50_Q3KFX5 Putative phage-related protein n=3 Tax=Pseudomon... 39 0.065 UniRef50_C6MCQ4 Putative addiction module antidote protein, CopG... 39 0.068 UniRef50_C7BK45 Putative uncharacterized protein n=2 Tax=Enterob... 38 0.074 UniRef50_Q59073 Uncharacterized protein MJ1679 n=1 Tax=Methanoca... 38 0.075 UniRef50_D1JAG3 Putative uncharacterized protein n=2 Tax=uncultu... 38 0.076 UniRef50_D1A7S6 Putative transcriptional regulator, CopG family ... 38 0.079 UniRef50_B2FQH5 Putative uncharacterized protein n=2 Tax=Stenotr... 38 0.082 UniRef50_C8W5M2 Putative uncharacterized protein n=1 Tax=Desulfo... 38 0.086 UniRef50_B7DU49 Putative transcriptional regulator, CopG family ... 38 0.086 UniRef50_C5EM96 Predicted protein n=3 Tax=root RepID=C5EM96_9FIRM 38 0.087 UniRef50_A1W5L9 Putative transcriptional regulators, CopG/Arc/Me... 38 0.091 UniRef50_C5V4M6 Putative transcriptional regulator, CopG/Arc/Met... 38 0.098 >UniRef50_Q727G4 Putative nickel-responsive regulator n=21 Tax=cellular organisms RepID=NIKR_DESVH Length = 139 Score = 171 bits (435), Expect = 4e-42, Method: Composition-based stats. Identities = 52/126 (41%), Positives = 78/126 (61%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R ++LD +LL+ D L R Y RSEAIRD++R+ L Q+ + + L+ VY+H Sbjct: 6 RFGVSLDSELLDKFDVLCDERCYQTRSEAIRDLIRNTLVQQEWEDTDREIAGTLTLVYDH 65 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVR 122 K DLA R+ QH HD+ + +LHVH++H +CLE+ VLKG V++ A +I+ +GV+ Sbjct: 66 HKSDLAQRLTEIQHDVHDIIITSLHVHLDHYNCLEVLVLKGPGQQVRNLAQRLISTKGVK 125 Query: 123 HGHLQC 128 HG L Sbjct: 126 HGKLSL 131 >UniRef50_Q01RT6 Putative nickel-responsive regulator n=2 Tax=Bacteria RepID=NIKR_SOLUE Length = 139 Score = 168 bits (425), Expect = 7e-41, Method: Composition-based stats. Identities = 51/128 (39%), Positives = 81/128 (63%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R+ + +D DLL+ DSL +RGY NRSEA RD++R L ++ + +Q ++ VY Sbjct: 4 LSRIGVAIDSDLLDKFDSLIGQRGYTNRSEAFRDLIRDELVEKTWESPESQVVGTVTLVY 63 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H R L ++ QH H ++TLHVH++HD+CLE+ V++G DV+ AD +I+ +G Sbjct: 64 DHHVRLLNEKLTGIQHDFHHSILSTLHVHLDHDNCLEVLVVRGRSADVRKVADVLISTKG 123 Query: 121 VRHGHLQC 128 V+HG L Sbjct: 124 VKHGRLTI 131 >UniRef50_B5R3Y5 Nickel-responsive regulator n=96 Tax=Enterobacteriaceae RepID=NIKR_SALEP Length = 133 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 131/133 (98%), Positives = 132/133 (99%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILR ALAQEATQ+HGTQGFAVLSYVY Sbjct: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRGALAQEATQEHGTQGFAVLSYVY 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG Sbjct: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 Query: 121 VRHGHLQCLPKED 133 VRHGHLQCLPKED Sbjct: 121 VRHGHLQCLPKED 133 >UniRef50_A4G0H7 Putative nickel-responsive regulator n=11 Tax=Methanococcales RepID=NIKR_METM5 Length = 141 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 43/130 (33%), Positives = 76/130 (58%), Gaps = 1/130 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEAT-QQHGTQGFAVLSYV 59 M R++I+L +LL D + + RGY +RSEAIRD +R L + +S + Sbjct: 4 MDRISISLPTNLLAEFDEIIEERGYASRSEAIRDSIRDYLIKHKWIHSLEGDRAGTISII 63 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H D+ ++ + QH + L VAT+H+H++HD C+E+ ++KGD +++ D + +Q+ Sbjct: 64 YDHHSTDVMEKLTNIQHDYEKLIVATIHMHLDHDHCMEVVLVKGDASEIKELTDKLTSQK 123 Query: 120 GVRHGHLQCL 129 GV+ L + Sbjct: 124 GVKQVKLTVM 133 >UniRef50_B8J1Q4 Putative nickel-responsive regulator n=3 Tax=Bacteria RepID=NIKR_DESDA Length = 138 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 60/123 (48%), Positives = 81/123 (65%), Gaps = 1/123 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R ++LD DLLE D L +R+ Y NRSEAIRD++R AL +E G L+ VY Sbjct: 4 LARFGVSLDQDLLEPFDELCRRKSYPNRSEAIRDLIRKALVEEKWNS-DAHGAGTLTLVY 62 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H K DL+ R+V QH HDL V TLHVH++H +CLE+ VLKG+ ++ AD +IA RG Sbjct: 63 DHHKNDLSRRLVQIQHDDHDLIVTTLHVHLDHYNCLEVLVLKGEPKRMRALADKLIACRG 122 Query: 121 VRH 123 V+H Sbjct: 123 VKH 125 >UniRef50_Q1MPD3 Putative nickel-responsive regulator n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=NIKR_LAWIP Length = 139 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 86/131 (65%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R ++LD+DLL D L R+GY +RSEA+RD++R ALA++ Q + VLS VY+H Sbjct: 6 RFGVSLDEDLLNKFDKLCDRQGYPSRSEALRDMIRQALAKDILQSKDSNAAGVLSLVYDH 65 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVR 122 R+L+ +++ QH +D +ATLH+H++ +CLE+ ++KG+ G +Q AD + + RGV+ Sbjct: 66 HTRELSRKLIERQHEMYDSIIATLHIHLDRYNCLEVLIIKGNGGKIQQLADMLCSIRGVK 125 Query: 123 HGHLQCLPKED 133 G LP E+ Sbjct: 126 LGAFSFLPVEE 136 >UniRef50_Q8TQZ1 Putative nickel-responsive regulator 1 n=7 Tax=Methanomicrobia RepID=NIKR1_METAC Length = 140 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 77/134 (57%), Gaps = 1/134 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ-EATQQHGTQGFAVLSYV 59 + R+ I+L D LL D + +RGY++RSE IRD +RS ++ E +++V Sbjct: 5 LMRIGISLPDILLGEFDEIIGKRGYSSRSEGIRDAIRSYISYYEWMNDIKGHRVGTIAFV 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H KR L++ + QHH+ L +++HVH++H +C E+ VL GD ++ ++ ++ + Sbjct: 65 YDHTKRGLSNSLTDIQHHYSHLIKSSIHVHLDHKECFEVVVLNGDGKEIAELSETMMVLK 124 Query: 120 GVRHGHLQCLPKED 133 GV+ L + + Sbjct: 125 GVKFSKLTTVASNE 138 >UniRef50_B5YAK0 Putative nickel-responsive regulator n=2 Tax=Dictyoglomus RepID=NIKR_DICT6 Length = 135 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 39/128 (30%), Positives = 82/128 (64%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R +++++DLLE D + + +GYN+RSEAIRD++R + +E + +S +Y Sbjct: 4 IVRFGVSVEEDLLENFDKIIENKGYNSRSEAIRDLMRDYIIKEKWNIKSEKVAGSISLIY 63 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 EH+ L+ ++ QHH+HD+ ++TLHVH++ +C+E+ +++G + ++ +++ + + Sbjct: 64 EHDVYGLSEKLTDIQHHYHDVIISTLHVHLDEKNCMEVILVRGKVEKIKKLYNEISSLKW 123 Query: 121 VRHGHLQC 128 VRH ++ Sbjct: 124 VRHTNISI 131 >UniRef50_A0B6X8 Putative nickel-responsive regulator n=4 Tax=Euryarchaeota RepID=NIKR_METTP Length = 140 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 42/132 (31%), Positives = 75/132 (56%), Gaps = 1/132 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALA-QEATQQHGTQGFAVLSYV 59 + R+ ++L + LL D + +RGY++RSE IRD +R+ + E + V++ V Sbjct: 5 LMRIGVSLPEKLLSRFDEIISQRGYSSRSEGIRDAIRNYIIHYEWMSDVEGERVGVITIV 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y H +R L + QH + ++LHVH++ D+CLE+ +L+G+ DV+ A+ ++A + Sbjct: 65 YSHHQRGLVDSLTDIQHEFGSIINSSLHVHLDKDNCLEVVILRGEGKDVRRAAERMMALK 124 Query: 120 GVRHGHLQCLPK 131 GV+H L Sbjct: 125 GVKHVKLTTTSV 136 >UniRef50_Q1H065 Transcriptional regulator, CopG family n=4 Tax=Proteobacteria RepID=Q1H065_METFK Length = 156 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 44/129 (34%), Positives = 75/129 (58%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R++I+L D+L LD + RG+ +RS+AI D+LR LA+ ++ ++ +Y Sbjct: 11 VNRISISLPDELHAELDIMVAERGFESRSQAINDMLRQYLAEHQREKGNEVMVGTITLLY 70 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + R L I Q+ H D +++LHVH+ + +E+ +++G DVQ AD++IA RG Sbjct: 71 NNATRGLQKTIADLQYQHVDEVISSLHVHLTDNQTMEVILVQGPAQDVQKIADELIALRG 130 Query: 121 VRHGHLQCL 129 V G LQ + Sbjct: 131 VTTGRLQLM 139 >UniRef50_C6XCC3 Transcriptional regulator NikR, CopG family n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCC3_METSD Length = 157 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 43/129 (33%), Positives = 75/129 (58%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R++I+L D+L LDS+ RG+ +RS+AI D+LR LA+ ++ ++ +Y Sbjct: 10 VNRISISLPDELHAELDSMVIERGFESRSQAINDMLRQHLAEHKREKGNEVMVGTITILY 69 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + R L I Q+ H D +++LHVH+ + +E+ +++G VQ A+++IA RG Sbjct: 70 NNGTRGLQKTIADLQYQHLDEVISSLHVHLADNQTMEVILVQGPALTVQAVANEIIALRG 129 Query: 121 VRHGHLQCL 129 V G LQ + Sbjct: 130 VITGKLQLM 138 >UniRef50_D1T1S2 Transcriptional regulator NikR, CopG family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T1S2_9BURK Length = 163 Score = 157 bits (398), Expect = 9e-38, Method: Composition-based stats. Identities = 60/142 (42%), Positives = 89/142 (62%), Gaps = 10/142 (7%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALA----------QEATQQHGT 50 MQR TI+LDD+L D+ R+GY NRSEA+RD++RS L + G+ Sbjct: 1 MQRFTISLDDELALQFDAFIARKGYGNRSEAVRDLIRSRLGCDSLGEAASGARRHGRDGS 60 Query: 51 QGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQH 110 A +SYVY+H ++ + SR++ QH HHDL + +LH H++HD+CLE VL+G V+ Sbjct: 61 WCVASVSYVYDHHEQTVTSRVLDLQHDHHDLVITSLHTHLDHDNCLETVVLRGPTAAVRE 120 Query: 111 FADDVIAQRGVRHGHLQCLPKE 132 A+ ++A RGVRHG++ +P E Sbjct: 121 CAERLVALRGVRHGNVHLVPLE 142 >UniRef50_Q217C6 Transcriptional regulator, CopG family n=3 Tax=Rhizobiales RepID=Q217C6_RHOPB Length = 167 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 63/126 (50%), Positives = 88/126 (69%), Gaps = 1/126 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ-GFAVLSYV 59 M+RVT++LDDDLLE D +R+GY NRSEA+RD+LR L ++ ++ A LSYV Sbjct: 1 MERVTVSLDDDLLEQFDGFIRRKGYMNRSEAVRDVLRDRLQEDRLSENNAPLCVACLSYV 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y H +R+LA RI QH HHDL +T+HVH++HD CLE+++++G V+ AD ++AQ Sbjct: 61 YNHHERELARRIAEIQHAHHDLIRSTMHVHLDHDSCLEVSMMEGPTIAVRELADALMAQT 120 Query: 120 GVRHGH 125 GVRHG Sbjct: 121 GVRHGR 126 >UniRef50_C7N0Q2 Predicted transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N0Q2_SLAHD Length = 172 Score = 156 bits (396), Expect = 1e-37, Method: Composition-based stats. Identities = 41/132 (31%), Positives = 78/132 (59%), Gaps = 1/132 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYN-NRSEAIRDILRSALAQEATQQHGTQGFAVLSYV 59 + R ++ + +DLL D L RG NRSE +RD++R ALA+++ + G + L+ V Sbjct: 5 LMRFSVAMPEDLLMDFDKLVATRGLAKNRSEVVRDLVRDALAEQSCDRPGEEVMGTLTIV 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 + H D+ ++ S QH + + V ++HVH++H+ C+E+ +L+G+ V+ ++ ++ + Sbjct: 65 FNHHTNDVREKLDSIQHDYLEQIVTSVHVHMDHELCMEVIILRGENDVVRTISNRIVGTK 124 Query: 120 GVRHGHLQCLPK 131 GV HG+L Sbjct: 125 GVLHGNLSITST 136 >UniRef50_B9JL06 Putative nickel-responsive regulator n=2 Tax=Proteobacteria RepID=NIKR_AGRRK Length = 145 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 76/133 (57%), Positives = 107/133 (80%), Gaps = 1/133 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALA-QEATQQHGTQGFAVLSYV 59 MQR+TIT+DDDLLET+D +S++RGY +RSE +RD++R A+ ++A T+ +A L+YV Sbjct: 1 MQRITITIDDDLLETIDKISEQRGYASRSETLRDLVRDAVTREQAAVDSETKCYATLTYV 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 YEHE RDL+ R+ +TQHHHHDLSV+TLHVH++ DCLE++VLKG +G+++ FAD V+ QR Sbjct: 61 YEHETRDLSRRLTTTQHHHHDLSVSTLHVHVDGHDCLEVSVLKGTVGEIKSFADSVVTQR 120 Query: 120 GVRHGHLQCLPKE 132 GVR G+L +P E Sbjct: 121 GVRFGNLHLIPSE 133 >UniRef50_B3QCC6 Putative nickel-responsive regulator n=5 Tax=Rhodopseudomonas palustris RepID=NIKR_RHOPT Length = 147 Score = 156 bits (394), Expect = 2e-37, Method: Composition-based stats. Identities = 66/129 (51%), Positives = 89/129 (68%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M RVTITLDDDL+E LD++ RGY NRSEAIRD+ R + Q A + + Y Y Sbjct: 1 MHRVTITLDDDLMEKLDAIIAARGYQNRSEAIRDLARIGIQQTAAETTSGHCVGAMVYTY 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H KRDL ++ + HHHHDLS AT+HVH++HD CLE+ +L G+ ++QHFAD + A+RG Sbjct: 61 DHSKRDLPRKLTQSFHHHHDLSRATMHVHLDHDQCLEVTILDGNASELQHFADHIFAERG 120 Query: 121 VRHGHLQCL 129 VR+G L + Sbjct: 121 VRYGRLVTI 129 >UniRef50_D2RI63 Transcriptional regulator NikR, CopG family n=3 Tax=Euryarchaeota RepID=D2RI63_ARCPR Length = 137 Score = 155 bits (393), Expect = 3e-37, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 75/127 (59%), Gaps = 1/127 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEAT-QQHGTQGFAVLSYV 59 + R+ ++L +LLE DS+ + RGY++RSEAIRD +R+ + + ++ + V+ + Sbjct: 5 ITRIGVSLPKNLLEEFDSIIKTRGYSSRSEAIRDAIRNYIMEYKWLEREEGEIVGVVYII 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H + ++ I+ QH D+ T+H+H++ D CLEI ++KGDM V+ D + Sbjct: 65 YDHTVKGVSDAIIDLQHEFLDVITTTMHIHLSKDYCLEIILVKGDMKKVKALVDKATTIK 124 Query: 120 GVRHGHL 126 GV + L Sbjct: 125 GVMNVKL 131 >UniRef50_Q6AS54 Putative nickel-responsive regulator n=3 Tax=Deltaproteobacteria RepID=NIKR_DESPS Length = 136 Score = 155 bits (393), Expect = 3e-37, Method: Composition-based stats. Identities = 50/128 (39%), Positives = 76/128 (59%), Gaps = 1/128 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 ++R +I+LDD+LLE D + YNNRSEAIRD++R + + V+S +Y Sbjct: 2 LKRFSISLDDNLLEIFDQHIAEKAYNNRSEAIRDLIRKNFVLKEWE-EDRDVMGVISLIY 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H + L ++ QH H V+T HVH++HD+CLE+ ++KG GDV AD + A +G Sbjct: 61 DHHQSQLQKKVTDLQHDFHHHIVSTTHVHMDHDNCLEVIIVKGRAGDVIELADGLAALKG 120 Query: 121 VRHGHLQC 128 VR +L Sbjct: 121 VRDSNLAM 128 >UniRef50_O29515 Putative nickel-responsive regulator n=1 Tax=Archaeoglobus fulgidus RepID=NIKR_ARCFU Length = 138 Score = 154 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 39/127 (30%), Positives = 74/127 (58%), Gaps = 1/127 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ-EATQQHGTQGFAVLSYV 59 + R+ ++L +LL+ D + RGY++RSEAIRD +R+ + + + + VL + Sbjct: 5 ITRIGVSLPKNLLDEFDRIISTRGYSSRSEAIRDAIRTYITEYRWLESEKGEIVGVLVVL 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H + ++ ++ QH H++ ++ H+H+N D CLE+ ++KG M ++ D + A R Sbjct: 65 YDHHVKGVSDLLIDLQHDFHEIITSSTHIHLNEDQCLEMILVKGKMERIKVLVDKISAAR 124 Query: 120 GVRHGHL 126 GV + L Sbjct: 125 GVMNVKL 131 >UniRef50_D0WH84 Toxin-antitoxin system protein n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WH84_9ACTN Length = 211 Score = 154 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 43/129 (33%), Positives = 77/129 (59%), Gaps = 1/129 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYN-NRSEAIRDILRSALAQEATQQHGTQGFAVLSYV 59 + R ++ + +DLL D L RG NRSE +RD++R ALA +A+ + G + L+ V Sbjct: 5 LMRFSVAMPEDLLVEFDKLVATRGLAKNRSEVVRDLVREALAGQASGEPGEEVMGTLTIV 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 + H D+ ++ S QH D + ++HVHI+H+ C+E+ +L+G+ +Q ++ ++ + Sbjct: 65 FNHHASDVREKLDSIQHDCLDQIITSVHVHIDHELCMEVVILRGETDVIQAISNLILGTK 124 Query: 120 GVRHGHLQC 128 GV HG+L Sbjct: 125 GVLHGNLAI 133 >UniRef50_C5BCE8 Nickel-responsive regulator n=12 Tax=Proteobacteria RepID=NIKR_EDWI9 Length = 145 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 66/134 (49%), Positives = 92/134 (68%), Gaps = 1/134 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQ-QHGTQGFAVLSYV 59 MQRVT++LDDDL+ +D++ + Y NRSE IRD+ R+ L A A L YV Sbjct: 1 MQRVTLSLDDDLMAEIDAIIRAGNYQNRSEVIRDLARAGLQSMAQAPSPSACCVAALFYV 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+HE R+L+ R+ T H HHDLS+A+LHVH++H CLE+++LKG G+V FA+ VIA+R Sbjct: 61 YDHESRELSKRLTRTFHDHHDLSLASLHVHLDHGSCLEVSLLKGAGGEVTRFAERVIAER 120 Query: 120 GVRHGHLQCLPKED 133 GVRHG L +P ++ Sbjct: 121 GVRHGKLVVVPGDE 134 >UniRef50_A1KA89 Nickel responsive regulator protein n=8 Tax=Proteobacteria RepID=A1KA89_AZOSB Length = 160 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 62/133 (46%), Positives = 87/133 (65%), Gaps = 1/133 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL-AQEATQQHGTQGFAVLSYV 59 M+R TI+L+D+L D+L RGY +RSEA+RD+LR L A + G A LSYV Sbjct: 1 MERFTISLEDELARDFDALIAERGYASRSEAVRDMLRRELEAARQRRGDGGHCIASLSYV 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 + H +RDL R+ QH HHDL+V+TLH H++HD+C+E +L+G V+ FAD ++AQ Sbjct: 61 FNHHERDLGERLTGIQHDHHDLTVSTLHAHLDHDNCIESTILRGPTEAVRRFADSIMAQS 120 Query: 120 GVRHGHLQCLPKE 132 GVRHG L + + Sbjct: 121 GVRHGQLNLISVD 133 >UniRef50_B3E7G1 Putative nickel-responsive regulator n=22 Tax=cellular organisms RepID=NIKR_GEOLS Length = 139 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 50/130 (38%), Positives = 80/130 (61%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R I++D DLL++ D L R+GY NRSEAIRD++R+ + +E + ++ VY Sbjct: 4 ITRFGISIDSDLLDSFDRLITRKGYQNRSEAIRDLIRATIVEEKMDAGHEEMVGTVTMVY 63 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 H RDLA ++ QH HH ++ LHVH++ +CLE+ VLKG +++ AD+++ +G Sbjct: 64 NHHVRDLADKLTEHQHQHHHQVISALHVHLDAHNCLEVLVLKGSSAEIKQIADELLGVKG 123 Query: 121 VRHGHLQCLP 130 V+HG L Sbjct: 124 VKHGKLFLTS 133 >UniRef50_B4S8H9 Putative transcriptional regulator, CopG family n=2 Tax=Chlorobiaceae RepID=B4S8H9_PROA2 Length = 147 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 51/126 (40%), Positives = 76/126 (60%), Gaps = 1/126 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M+R ++L+D+LLE LDSL Q + NRS+AIR ++R E + + L VY Sbjct: 1 MKRFGVSLEDELLEQLDSLVQHHRFPNRSQAIRYLIRKHNRDEYWESNEAVC-GCLVLVY 59 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H + DL R+ S QH H+L + + HVH++H++CLE LKG D+ AD +IA +G Sbjct: 60 DHHRSDLQKRLTSIQHEFHNLVLCSQHVHLDHNNCLETITLKGKAIDIGELADRLIALKG 119 Query: 121 VRHGHL 126 + HG L Sbjct: 120 IVHGEL 125 >UniRef50_Q88HL5 Putative nickel-responsive regulator n=2 Tax=Pseudomonas putida RepID=NIKR_PSEPK Length = 138 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 56/130 (43%), Positives = 86/130 (66%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 MQR+TITLD++LL+ +D +GY RSEAIRD+LR+ + + AV+SY+Y Sbjct: 1 MQRITITLDEELLDVIDRRVATQGYQGRSEAIRDLLRAGMRESEALPDDAACVAVVSYLY 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H R+L R+ T H HHDL+ +TLHVH++ CLE++VL+G+ G + + ++ +RG Sbjct: 61 DHSTRELPRRLNQTLHAHHDLTRSTLHVHLDAGHCLEVSVLQGESGRIGELSRQLMVERG 120 Query: 121 VRHGHLQCLP 130 V HG +Q +P Sbjct: 121 VEHGQVQVIP 130 >UniRef50_C7MLI8 Predicted transcriptional regulator with CopG/Arc/MetJ DNA-binding domain protein and metal-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MLI8_CRYCD Length = 140 Score = 152 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 1/129 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYN-NRSEAIRDILRSALAQEATQQHGTQGFAVLSYV 59 + R ++ + +DLL D L RRG + NRSE IRD++R AL + G + L+ V Sbjct: 5 LMRFSVAMPEDLLIEFDQLVARRGLSKNRSEVIRDLVREALVEAECATPGCEVMGTLTIV 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 + H DL R+ QHH+ + +++ HVH++ CLE+ +++G+ G VQ +D ++ + Sbjct: 65 FNHHANDLRDRLDDIQHHYVENIISSTHVHLDEHSCLEVIIMRGETGLVQGISDMILGTK 124 Query: 120 GVRHGHLQC 128 GV+ G L Sbjct: 125 GVKTGRLVL 133 >UniRef50_B1M0C3 Putative transcriptional regulator, CopG family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M0C3_METRJ Length = 147 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 71/135 (52%), Positives = 92/135 (68%), Gaps = 3/135 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ--GFAVLSY 58 MQR+TIT+DD LL +D L RRGY +RSEA+RDI+R ALA + G + LSY Sbjct: 1 MQRITITIDDALLTAVDDLCARRGYGSRSEAVRDIVRDALAPARAAETGGSGACYGALSY 60 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 VY H RDLA R+ H H +S+A+LHVH+NHD CLE+AVL+G +Q +AD V+ Q Sbjct: 61 VYSHGTRDLARRLTGEGHEH-GVSIASLHVHLNHDACLEVAVLRGPPARMQSYADAVVTQ 119 Query: 119 RGVRHGHLQCLPKED 133 RGVR+GHL +P+ D Sbjct: 120 RGVRYGHLHLIPEGD 134 >UniRef50_C6QSD1 Putative transcriptional regulator, CopG family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QSD1_9BACI Length = 146 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 40/133 (30%), Positives = 69/133 (51%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R ++ LLE D + +GY NRSEAIRD+ R A+ + + V+ VY Sbjct: 7 LIRFGVSFPASLLEQFDQYIKEQGYTNRSEAIRDLARKAIIEPSRLNPDDNVAGVIIMVY 66 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 H DL + + QH H ++T+H+H+NH CLE+ V++G + +++ + Q+G Sbjct: 67 NHHISDLPIFLKNVQHEFHHDIISTMHIHLNHTQCLEVVVVRGKLVNLRSLHQQIQVQKG 126 Query: 121 VRHGHLQCLPKED 133 V + + +D Sbjct: 127 VFYAEMSVTYLDD 139 >UniRef50_UPI00016C3510 nickel responsive regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3510 Length = 149 Score = 151 bits (382), Expect = 6e-36, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 71/128 (55%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R +++L+ DLL D + + RSEAIR +LR L ++A A L+ VY Sbjct: 4 LTRFSVSLEADLLGAFDKYVRDGAFATRSEAIRQLLRQTLTRDAFDADDAPVTATLTIVY 63 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H + L +++ QH H + +A++HVH++HD C+E+ VL+G +++ A + +G Sbjct: 64 DHHRPHLVEKLLDVQHDHANRVIASMHVHLDHDRCMEVIVLRGPGEALRNLAAAIRGLKG 123 Query: 121 VRHGHLQC 128 V G L Sbjct: 124 VHTGTLAL 131 >UniRef50_C6P2L7 Putative transcriptional regulator, CopG family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2L7_9PROT Length = 169 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 39/129 (30%), Positives = 74/129 (57%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + RV+I+L LL LDS+ + RGY +RS+AI +++ L++ ++ +Y Sbjct: 13 VSRVSISLPPPLLNELDSMVESRGYESRSQAIGEMVNYQLSEHKRTLGNEVMVGTITLLY 72 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + RDL ++ Q+ H + +++LHVH+ D +E+ +++G ++Q A+++I RG Sbjct: 73 DRLTRDLQKKLADMQYKHINEVISSLHVHLTEDQMMEVILVQGPAAELQAVANEMITLRG 132 Query: 121 VRHGHLQCL 129 + G LQ L Sbjct: 133 IITGRLQLL 141 >UniRef50_B5IB41 NikR C terminal nickel binding domain family n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IB41_9EURY Length = 135 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 45/133 (33%), Positives = 75/133 (56%), Gaps = 1/133 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA-TQQHGTQGFAVLSYV 59 +QR +++DD LL+ D RRGY +RSEAIRD++R AL + T F ++ + Sbjct: 2 IQRFGVSIDDSLLKKFDDYIMRRGYISRSEAIRDLIRDALIENTITSDENVDVFGTITMI 61 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+HE + + +I QH + + A +HVH++ +CLE+ +L G V+ AD + + + Sbjct: 62 YDHEVKGITEKITHIQHSYVNEIRAAVHVHVDERNCLEVVILHGKSKVVREIADKLGSLK 121 Query: 120 GVRHGHLQCLPKE 132 GV++ Q E Sbjct: 122 GVKNLKFQLTIVE 134 >UniRef50_Q8PZ28 Putative nickel-responsive regulator 1 n=9 Tax=Archaea RepID=NIKR1_METMA Length = 146 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 40/134 (29%), Positives = 77/134 (57%), Gaps = 1/134 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ-EATQQHGTQGFAVLSYV 59 + R+ ++L D LL D + ++RGY++RSEAIRD +RS ++ E + + Sbjct: 5 LMRIGVSLPDTLLGKFDEIIEKRGYSSRSEAIRDSIRSYISYNEWMGNIKGHHVGTIVII 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H +R L++ + QHH+ L +++H++ + +DC EI VL+G+ ++ A+ ++A + Sbjct: 65 YDHTQRGLSNVLTDIQHHYSHLIRSSIHIYPDREDCFEIVVLEGEGKEITELAEAIMALK 124 Query: 120 GVRHGHLQCLPKED 133 GV+ L + Sbjct: 125 GVKLSKLITTESNE 138 >UniRef50_Q578T1 Nickel-responsive regulator n=36 Tax=Brucella RepID=NIKR_BRUAB Length = 132 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 66/132 (50%), Positives = 95/132 (71%), Gaps = 1/132 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ-GFAVLSYV 59 MQR+TIT+DDDL+ LD + + +GY NRSEA+RD+ R+ L Q + ++ + VLSY Sbjct: 1 MQRITITIDDDLMAALDRMIEIKGYQNRSEALRDLARTGLQQASLEEGQMEACVGVLSYT 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H RDL+ ++ +T H HH++SVA++HVH++HD CLE+++LKG DV+HFAD V A+R Sbjct: 61 YDHSARDLSKKLTNTHHDHHNISVASMHVHLDHDRCLEVSILKGKTDDVRHFADHVKAER 120 Query: 120 GVRHGHLQCLPK 131 V HG L LP Sbjct: 121 HVTHGTLAVLPL 132 >UniRef50_Q0A737 Transcriptional regulator, CopG family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A737_ALHEH Length = 139 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 56/130 (43%), Positives = 91/130 (70%), Gaps = 1/130 (0%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL-AQEATQQHGTQGFAVLSYVY 60 +RVT++L+ L D+ +RRGYNNRSEA+RD++R AL ++ ++ T VL+Y+Y Sbjct: 3 ERVTVSLESGLAAEFDNFLERRGYNNRSEAVRDLIRGALGSEALDERPDTPCVGVLTYLY 62 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H++R+LA R+ H H DL+V TLH+H++HD C+E +LKG+ ++ FA+ V+A+ G Sbjct: 63 DHKERELAKRLTEAHHAHFDLTVTTLHMHVDHDLCVEAVMLKGEAAQIEGFAESVMARPG 122 Query: 121 VRHGHLQCLP 130 ++HG L +P Sbjct: 123 IQHGRLHRIP 132 >UniRef50_D1YXH4 Putative nickel-responsive regulator n=1 Tax=Methanocella paludicola SANAE RepID=D1YXH4_METPS Length = 139 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 75/133 (56%), Gaps = 1/133 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH-GTQGFAVLSYV 59 + R+ I++ L+ D + +RGY++RSE IRD +R + E ++S + Sbjct: 4 LARIGISVPGRLMGRFDEVIAQRGYSSRSEGIRDAIRDYIQYEKWMSKVRGDRIGIISIL 63 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y +KR L S ++ +H + L + T+H +++ D+C+++ +++G+ G ++ F + ++A + Sbjct: 64 YNQDKRKLVSSLMQVRHDNSGLILTTIHKYLDKDNCMDVIIVRGEGGSIRAFTEKLMANK 123 Query: 120 GVRHGHLQCLPKE 132 V+H L + E Sbjct: 124 CVKHVKLTTILPE 136 >UniRef50_Q2Y9N4 Transcriptional regulator, CopG family n=2 Tax=Nitrosomonadaceae RepID=Q2Y9N4_NITMU Length = 153 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 93/133 (69%), Gaps = 1/133 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL-AQEATQQHGTQGFAVLSYV 59 M+R+TI+L+D L + +S + GY NRSEA+RD++R+ + +Q A LSY+ Sbjct: 1 MERLTISLNDQLAKQFESAMHKLGYFNRSEAVRDLIRNMIETARQEEQVDGYCIATLSYI 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y H +R+LA + STQH+HH+L+++T+HVH++HD+CLE+ +L+G + V++FA+ V A Sbjct: 61 YNHHERELARCVTSTQHNHHNLTLSTMHVHMDHDNCLEVTILRGTIKSVKNFANLVTATP 120 Query: 120 GVRHGHLQCLPKE 132 GVRHG L LP E Sbjct: 121 GVRHGKLHLLPIE 133 >UniRef50_UPI0001C418D8 nickel responsive transcriptional regulator NikR n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C418D8 Length = 164 Score = 147 bits (373), Expect = 7e-35, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 1/133 (0%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH-GTQGFAVLSYVY 60 R++++L LL D + + RGY +RS+ IRD L + + V++ +Y Sbjct: 1 MRISMSLPKKLLAEFDEVLKDRGYQSRSKGIRDALSDYILRYPWMNEMEGNRVGVITVIY 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H + + QH + A++H+H+ H C+E+ V+ G++ ++ A+ ++ +G Sbjct: 61 DHHFTGVMENLADIQHDCMEEINASMHIHMTHKYCMEVIVVNGNVTHIRELAERMMRLKG 120 Query: 121 VRHGHLQCLPKED 133 V H L + Sbjct: 121 VEHVKLTSTANGE 133 >UniRef50_Q2IN94 Putative nickel-responsive regulator n=9 Tax=Deltaproteobacteria RepID=NIKR_ANADE Length = 139 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 51/128 (39%), Positives = 80/128 (62%), Gaps = 2/128 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA--TQQHGTQGFAVLSY 58 ++R+ I+L+D LLE D L +GY NRSEA+RD++R AL Q A + AV++ Sbjct: 2 LERIGISLEDGLLEQFDKLIAEKGYVNRSEAVRDLIRDALVQRAFTESSGREERVAVVTL 61 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 VY+H+ LA ++ QH +H V+ LHVH++ +CLE+ VL+G DV + ++A Sbjct: 62 VYDHDSSSLAQKLAHIQHENHRAVVSALHVHMDAHNCLEVLVLRGRGKDVVAMGESLVAT 121 Query: 119 RGVRHGHL 126 +GV++G L Sbjct: 122 KGVKYGKL 129 >UniRef50_O26834 Putative nickel-responsive regulator 2 n=5 Tax=Methanobacteriaceae RepID=NIKR2_METTH Length = 140 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 35/134 (26%), Positives = 69/134 (51%), Gaps = 1/134 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ-EATQQHGTQGFAVLSYV 59 M R++++L LL D + + RGY +RS+ IRD L+ + + + + + +++ + Sbjct: 1 MMRISMSLPKKLLNEFDEVLRDRGYQSRSKGIRDALKDYIVRYQWMNEMEGERIGIIAVI 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H + + QH + + A +HVH+ CLE+ V+KGD+ ++ + ++ + Sbjct: 61 YDHHYTGVMEDLADIQHDYREYINAVMHVHMTERHCLEVIVVKGDVAKIRELTEKMMRLK 120 Query: 120 GVRHGHLQCLPKED 133 GV H L E Sbjct: 121 GVEHVRLTSTSTEQ 134 >UniRef50_A8FTW2 Nickel-responsive regulator n=3 Tax=Shewanella RepID=A8FTW2_SHESH Length = 136 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 69/125 (55%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R T++L + L + ++ Q RGY +RSE IRD+ R + + VL+ V++H Sbjct: 7 RFTVSLPESLFKEIELDQQERGYQSRSEYIRDLFRDRIVDKQWNNSKEDVVGVLTLVFDH 66 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVR 122 +R L+ +++ QH+H + + HVH++H +CLE ++KG +V + + A +GV+ Sbjct: 67 HQRGLSEKLIEIQHNHLVHVLCSTHVHVDHHNCLETIIIKGQASEVNLLVNQISALKGVK 126 Query: 123 HGHLQ 127 L Sbjct: 127 VARLS 131 >UniRef50_C3XHL4 Nickel responsive regulator n=3 Tax=Proteobacteria RepID=C3XHL4_9HELI Length = 156 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 5/130 (3%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGF----AVLSY 58 R +++L LL+ LDS + GY +RSE IRD++R L E + ++G VL Sbjct: 18 RFSVSLPLGLLDELDSKITQNGYTSRSELIRDMIREKLVDEKWDKGESEGTKEHLGVLVL 77 Query: 59 VYEHEKRDLASRIVSTQH-HHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIA 117 +Y+H +R L + +H +H + T HVH++H +CLE +LKG D++ ++ Sbjct: 78 IYDHHQRGLNQKKNEIEHNNHLVQIICTTHVHVDHHNCLETIILKGKKEDIEKLCIEIGG 137 Query: 118 QRGVRHGHLQ 127 GV+ L Sbjct: 138 LLGVKFAKLT 147 >UniRef50_C1TP45 Predicted transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TP45_9BACT Length = 137 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 62/121 (51%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R + + + LL D +R+G NRSEAIR ++R +++ + + ++ Y Sbjct: 6 LVRFGVAVPEGLLRDFDRQIERKGVPNRSEAIRQLIRDSISDTRWTEGKGTVYGSVTISY 65 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 H R+ S + QH D+ + T HVH +HD C+E+ ++KG V+ +++ R Sbjct: 66 NHHTREACSTLTDIQHDFGDVIICTSHVHADHDHCVEVIMVKGQASRVKALIEELSGVRA 125 Query: 121 V 121 + Sbjct: 126 I 126 >UniRef50_C1SLF1 Predicted transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLF1_9BACT Length = 138 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 43/126 (34%), Positives = 76/126 (60%), Gaps = 1/126 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R++I++++ LLE + + + +RSE I+ ++RS L ++ GT A LS VY Sbjct: 4 VSRISISIEETLLEKFEKFLEDNNFPSRSEGIKYLIRSLLVEQEW-AAGTNIAASLSIVY 62 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H K L ++VS QH L V + HVH++H +C+E+ VLKGD +V+ +++ +G Sbjct: 63 DHHKSGLMEKLVSIQHDFEQLVVCSQHVHLDHLNCMEVLVLKGDAAEVKELHTRLMSVKG 122 Query: 121 VRHGHL 126 ++H L Sbjct: 123 LKHCSL 128 >UniRef50_Q17Z13 Putative nickel-responsive regulator n=26 Tax=Bacteria RepID=NIKR_HELAH Length = 148 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 40/128 (31%), Positives = 70/128 (54%), Gaps = 3/128 (2%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEAT---QQHGTQGFAVLSYV 59 R +++L +LL+ LD+ + GY++RSE +RD++R L ++ AVL + Sbjct: 12 RFSVSLQQNLLDELDNRIIKNGYSSRSELVRDLIREKLVEDNWIEDSPDDKSKVAVLVVI 71 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H +R+L R++ QH + T H+H++ +CLE +LKG +VQ ++ R Sbjct: 72 YDHHQRELNQRMIDIQHASETHVLCTTHIHMDSHNCLETIILKGSSAEVQRLQLEIGGLR 131 Query: 120 GVRHGHLQ 127 GV+ L Sbjct: 132 GVKFAKLT 139 >UniRef50_C9M5I2 Toxin-antitoxin system protein n=2 Tax=Synergistaceae RepID=C9M5I2_9BACT Length = 143 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 67/131 (51%), Gaps = 4/131 (3%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R + + + LL+ D ++G RSEA+R ++R + + Q + + ++ Y Sbjct: 12 LIRFGVAVPESLLKLFDKRFHKQGVPTRSEALRQLIRDFVTADTWQSGQGEVYGSITITY 71 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 H+ R+ +++ QHH+ D+ + T H+H N CLE+ +L+G + V+ +++ + + Sbjct: 72 NHDTREAGTKMTEIQHHYKDVILCTTHIHANERGCLEVIMLRGPVPRVKKLIEEMRSLKA 131 Query: 121 VRHGHLQCLPK 131 + L P Sbjct: 132 I----LSLTPV 138 >UniRef50_A7I1P3 Putative nickel-responsive regulator n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=NIKR_CAMHC Length = 138 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 73/130 (56%), Gaps = 1/130 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEAT-QQHGTQGFAVLSYV 59 + R ++TL ++L + ++ + Y +RSE IRD++R + + + AVLS V Sbjct: 4 LARFSVTLPNELFDEINKRVKNTEYPSRSEFIRDLVREKIIADKWKDDSQSDAIAVLSIV 63 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y H + +L S+++ +HH + H+HI+ ++CLE+ L+G +++ F+ + + + Sbjct: 64 YSHHQNNLVSQMLELEHHADVKIACSTHIHIDKENCLEMISLQGSGKNIEKFSQKIGSLK 123 Query: 120 GVRHGHLQCL 129 GV+ +L + Sbjct: 124 GVKFSNLARI 133 >UniRef50_B9XA69 Putative transcriptional regulator, CopG family n=2 Tax=Verrucomicrobiales RepID=B9XA69_9BACT Length = 149 Score = 137 bits (346), Expect = 9e-32, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 69/128 (53%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R +I++ D LD + Q+RG+ NRS+ + ++R L A ++++VY Sbjct: 8 LVRFSISMPGDAARGLDEMVQQRGFANRSQCLTSMVRDQLVVHAGDMGDAVMMGLITFVY 67 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 H KR+L +R+ QH H ++ VH+ ++ L++ +++G ++ A ++ +G Sbjct: 68 NHRKRNLQNRLTDIQHLHLKEIISIQLVHLENEQSLQLMLVQGPAKSLRAIAAEIFCLKG 127 Query: 121 VRHGHLQC 128 V HG+LQ Sbjct: 128 VCHGNLQL 135 >UniRef50_B4U5P2 Putative transcriptional regulator, CopG family n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5P2_HYDS0 Length = 139 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 74/126 (58%), Gaps = 1/126 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 ++R+ IT+ +L++ +D ++ Y +RSE IRD++R A+ ++ + + VL +Y Sbjct: 9 VERICITIPKELVDFIDKKVEQS-YASRSEFIRDLIREAIVEDEWEDENNELIGVLVIIY 67 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H KR+L +++ QH+H+ + T H+HI+H++CLE ++KG + + + G Sbjct: 68 DHHKRELTQKLLDIQHNHYINILCTTHIHIDHNNCLETIMIKGPSQTIVETVNIIAGLNG 127 Query: 121 VRHGHL 126 V+ L Sbjct: 128 VKFAKL 133 >UniRef50_A6L9L6 Transcriptional regulator, putative nickel responsive regulator n=6 Tax=Bacteroidales RepID=A6L9L6_PARD8 Length = 133 Score = 134 bits (339), Expect = 6e-31, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 69/128 (53%), Gaps = 1/128 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 ++R ++L+D+LLE+LD G+ NRS+AIR ++ +A+ Q + +Y Sbjct: 3 LKRFGVSLEDNLLESLDQYVNENGFANRSQAIRFLIEKNVAERKWQC-NHIVAGTIVIMY 61 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + K++++ +I Q ++ D+ +++ +IN + CL I + G + +D + +G Sbjct: 62 DQVKKEISLKITGIQQNYKDVILSSSQYYINQNFCLHIVTVMGTAHRLTELSDKLTTIKG 121 Query: 121 VRHGHLQC 128 ++HG L Sbjct: 122 IKHGKLVM 129 >UniRef50_C7JHT8 Transcriptional regulator CopG n=7 Tax=Acetobacter pasteurianus RepID=C7JHT8_ACEP3 Length = 159 Score = 134 bits (338), Expect = 9e-31, Method: Composition-based stats. Identities = 32/131 (24%), Positives = 65/131 (49%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R++++L +L LD++ +GY +RS+AI++IL L V+ Y Sbjct: 10 VSRISVSLPPGILHELDAMVAEKGYASRSQAIQNILHQELMASRKDCAEELMAGVIILFY 69 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + L+ ++ Q+ + +++LHV++ LE+ +++G + +Q AD + Q G Sbjct: 70 NNAATGLSQKLAELQYENLAEVISSLHVNLVRRQTLEVLLVQGQVKKLQEIADQFMTQSG 129 Query: 121 VRHGHLQCLPK 131 V G L + Sbjct: 130 VISGKLHLIAS 140 >UniRef50_B8GWH5 Nickel-responsive regulator NikR n=2 Tax=Caulobacter vibrioides RepID=B8GWH5_CAUCN Length = 162 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 63/126 (50%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R++I+L +L+ LD++ RG +RS+ I +++R LA+ + ++ ++ +Y Sbjct: 11 LARLSISLPAELMVQLDAMVAERGLPSRSQMIAELIRHELAEHSGERPDAMLAGTITLIY 70 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 E + + TQ + ++ +V + D +E+ +++G +Q D + RG Sbjct: 71 RAESGRVRHALAQTQLGYVKEVISAQNVFLEDDQAMEVLLVQGPAERLQQLCDALRKVRG 130 Query: 121 VRHGHL 126 V+ L Sbjct: 131 VQQIKL 136 >UniRef50_Q8TV90 Putative nickel-responsive regulator n=1 Tax=Methanopyrus kandleri RepID=NIKR_METKA Length = 141 Score = 132 bits (334), Expect = 2e-30, Method: Composition-based stats. Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 4/134 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQ--HGTQGFAVLSY 58 + R +IT+ + LL+ ++ L + +RSE R LR L + + + F L+Y Sbjct: 8 LVRTSITVPEQLLQKVNELIASGYFASRSEIFRQALREYLQRIEWTERVGDEEYFGALTY 67 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 V++HE+ + +V QH D+ ++T H+H++ + CLE+ +L+G + A + Sbjct: 68 VFQHERAE--PELVKVQHEFTDVIISTTHIHVSPEKCLEVLLLQGPGKRIAELAKRIRGV 125 Query: 119 RGVRHGHLQCLPKE 132 RGV L + E Sbjct: 126 RGVEQAKLTVVSSE 139 >UniRef50_B5JR54 NikR C terminal nickel binding domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JR54_9BACT Length = 143 Score = 132 bits (333), Expect = 3e-30, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 64/127 (50%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +RV+IT+ +L D L +RG++NRS+AI +IL + + ++ Y Sbjct: 6 ERVSITIPRSVLAKFDQLLVQRGFSNRSQAIAEILNREIIEATAHGEDQVMAGTITLFYS 65 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 + L S + Q H +++LHV + D +E+ V++G ++ A+++I +GV Sbjct: 66 TRRNTLQSTLSKIQRQHIAEVISSLHVQLEDDHIMEVLVVQGPAPKLRSIANELITCKGV 125 Query: 122 RHGHLQC 128 + G L Sbjct: 126 KTGKLNL 132 >UniRef50_Q2GAR7 Transcriptional regulator, CopG family n=2 Tax=Alphaproteobacteria RepID=Q2GAR7_NOVAD Length = 158 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 65/127 (51%), Gaps = 1/127 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ-EATQQHGTQGFAVLSYV 59 + R++++L +L LD + + RG +RS+ I +++R ALA+ EA + ++ V Sbjct: 8 LARLSMSLPGELFRQLDMMVEERGLPSRSQLIAELIRHALAEHEAYTRPDEMLAGTITIV 67 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y ++ + ++ TQ + +++ HV + D LE+ +++G ++ D + R Sbjct: 68 YRGDRGRVRHQLAQTQADYLKEVISSQHVFLEDDQSLEVLLVQGPAVRLKELCDALRRVR 127 Query: 120 GVRHGHL 126 GV L Sbjct: 128 GVHQLKL 134 >UniRef50_Q18I31 Putative nickel-responsive regulator n=10 Tax=Halobacteriaceae RepID=NIKR_HALWD Length = 142 Score = 132 bits (332), Expect = 5e-30, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 68/134 (50%), Gaps = 1/134 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ-EATQQHGTQGFAVLSYV 59 M V++++ ++LLE +D + GY RSE R+ R+ L + E + + +++ V Sbjct: 1 MSVVSVSMPEELLERIDQFADDHGYTGRSEVFREASRNLLEEFEDKRLENRELMGIVTVV 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 +++E ++ +++ +H H D+ + H H+ C+E+ VL+G + + F + A + Sbjct: 61 FDYETTNVEEKMMHLRHEHEDIVASNFHSHVGGHHCMELFVLEGSLETISTFVGKIRATK 120 Query: 120 GVRHGHLQCLPKED 133 LP +D Sbjct: 121 NTLTIDYSVLPVDD 134 >UniRef50_C8PGA0 Nickel-responsive regulator n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PGA0_9PROT Length = 143 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 1/125 (0%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ-GFAVLSYVYE 61 R +I+L L E LD + + + Y +RSE IRD++R + + G VL Y+ Sbjct: 11 RFSISLPTKLFEDLDEMVRAKQYLSRSEFIRDLIREKMVEGVLHGDGEDDCVGVLCIAYD 70 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 H + DL ++V +HH + V+T H HI+ C E ++ + ++ + + A +GV Sbjct: 71 HHQSDLIEQLVEIEHHANVTIVSTSHFHIDERHCFEEITMRDKISKIERLSAKIGALKGV 130 Query: 122 RHGHL 126 + L Sbjct: 131 KFSKL 135 >UniRef50_A3V7Y8 Transcriptional regulator, CopG family n=2 Tax=Alphaproteobacteria RepID=A3V7Y8_9RHOB Length = 154 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 56/131 (42%), Positives = 79/131 (60%), Gaps = 2/131 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M+R+T+TLDDDLL +D+ G NRSEAIRD++ ALA +A F + SY Sbjct: 1 MKRITMTLDDDLLAAVDAHMDASGATNRSEAIRDLVARALAPQAP--SDAACFGIASYTV 58 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 E + RDLA ++ + HHD A L V ++H LE+AVLKG + +V+ A+ + +RG Sbjct: 59 EPDIRDLARKVPQVRQDHHDQFAAALSVPVDHATSLEVAVLKGSVAEVETIANALFLERG 118 Query: 121 VRHGHLQCLPK 131 VRHG L +P Sbjct: 119 VRHGRLALVPV 129 >UniRef50_C5SGL4 Putative transcriptional regulator, CopG family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SGL4_9CAUL Length = 169 Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 62/127 (48%), Gaps = 1/127 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA-TQQHGTQGFAVLSYV 59 + R++++L LL++ D + RG +RS A+ +++R A+A+ A Q+ ++ V Sbjct: 9 LARLSMSLPGSLLDSFDKMVADRGLPSRSSAMTELIRGAVAEHAERQRPDDVVAGTVTLV 68 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y + + R+ Q +++ HV + +D LE+ +++G ++ D R Sbjct: 69 YASDSGTVRHRVAQKQLDFLKEVISSQHVFLENDQSLEVLLVQGPPSQLEDLCDGFRRIR 128 Query: 120 GVRHGHL 126 G+ L Sbjct: 129 GMYQVKL 135 >UniRef50_Q31EP2 Transcriptional regulator, CopG family n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EP2_THICR Length = 157 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 63/128 (49%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R + +L +LE LD L RG+NNRS + +I++ ++ L+ VY Sbjct: 8 LVRTSASLPAKVLEDLDKLVIDRGFNNRSALLAEIIQREVSAYQQDHTNEVMAGTLTLVY 67 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H L ++ +H + +++ + + + LE+ +++G D+ + +++ RG Sbjct: 68 DHAVPGLQLKLNQLKHQYVAEIISSTQIQLMNHHTLEVNLMQGPAQDLNKISHKILSNRG 127 Query: 121 VRHGHLQC 128 V+ G+L Sbjct: 128 VKTGNLYL 135 >UniRef50_A3K349 Transcriptionalregulator, CopG family protein n=1 Tax=Sagittula stellata E-37 RepID=A3K349_9RHOB Length = 155 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 81/133 (60%), Gaps = 2/133 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 MQR TI ++DDLL LD +R G NRSEAIR +LR +L ++ Q+ + V+SY Sbjct: 1 MQRTTIAIEDDLLAELDQQLERSGAINRSEAIRALLRRSLTRDTPQE--VECIGVVSYTL 58 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + R+L R+ T H HD +VA L V ++H + +E+ V+ G + DV+ A + A+RG Sbjct: 59 DFSARELGRRVPHTCHSSHDQAVAALSVPLDHTNAMEVTVMSGRVADVEDDAHGLFAERG 118 Query: 121 VRHGHLQCLPKED 133 +RHG L +P +D Sbjct: 119 IRHGQLSLVPVKD 131 >UniRef50_Q18EC5 Transcription regulator; probably nickel responsive regulator n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18EC5_HALWD Length = 179 Score = 124 bits (313), Expect = 6e-28, Method: Composition-based stats. Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 1/130 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH-GTQGFAVLSYV 59 + R+++TL DLL L+ + + YN+RSEA RD LR+ + + Q + + Sbjct: 27 VDRMSVTLPPDLLSELNQVVETGEYNSRSEATRDALRAFVTEFNQQTRLSGTLSGTVVVL 86 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 YEHE + + QH + VA HVH++ CLE + G G ++ + Sbjct: 87 YEHEHSGVTDEMSELQHDFTETIVAVHHVHLSDHLCLESIAVDGAGGRIETLLSRIRPLE 146 Query: 120 GVRHGHLQCL 129 GVR L + Sbjct: 147 GVRQVKLAMV 156 >UniRef50_Q5V2S1 Putative nickel-responsive regulator n=1 Tax=Haloarcula marismortui RepID=NIKR_HALMA Length = 139 Score = 124 bits (313), Expect = 6e-28, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 70/134 (52%), Gaps = 1/134 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ-EATQQHGTQGFAVLSYV 59 M V+I++ D+L E +D+ + GY RSE +R+ +R+ + + E + + AV++ + Sbjct: 1 MGVVSISMPDELEERIDTFADEHGYTGRSEVVREAVRNLMGEFEDKRLEDRELMAVVTVL 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 +++E + +++ +H H + + H H+ C+E+ VL+G + D+ F V A + Sbjct: 61 FDYETTTVEEKMMHLRHDHESIVASNFHSHVGDRYCMELFVLEGQLEDISAFVGKVRATK 120 Query: 120 GVRHGHLQCLPKED 133 LP +D Sbjct: 121 DTLSVDYSVLPVDD 134 >UniRef50_A3DKG0 Putative transcriptional regulator, CopG family n=1 Tax=Staphylothermus marinus F1 RepID=A3DKG0_STAMF Length = 134 Score = 122 bits (308), Expect = 3e-27, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 1/119 (0%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 + I L +DL L + G RS+ I++ LR + + + G + V+ VY H Sbjct: 6 KFGIYLPEDLARELGECMKITGIRKRSKIIQEALRLFIVEHRWKTVG-KASGVIGVVYNH 64 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 E R + + QH + D+ V+T+HVH++ + C+ +++GD G ++ +++ +GV Sbjct: 65 EVRGVDEALTDIQHEYLDIIVSTVHVHLDKEKCMLAIIVRGDTGRIKELLSNIMNIKGV 123 >UniRef50_A3PPB2 Transcriptional regulator, CopG family n=3 Tax=Rhodobacter sphaeroides RepID=A3PPB2_RHOS1 Length = 157 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 43/133 (32%), Positives = 69/133 (51%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M R TITLD++L +D+ R NRSEAIRD++R LA + T V+S Sbjct: 1 MIRTTITLDEELAAEIDAHVARSAVPNRSEAIRDLVRRGLAAGPAKPADTLCIGVISCAM 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 E +L+ R+ + HD V +NH + +++ VL+ + ++ AD + +RG Sbjct: 61 EQTLPELSRRVRDARLARHDEIRFVTSVPLNHRETIDLIVLQASVSRIEELADRLSLERG 120 Query: 121 VRHGHLQCLPKED 133 VRH + +P E+ Sbjct: 121 VRHATVGLIPIEE 133 >UniRef50_A3M466 CopG n=14 Tax=Acinetobacter RepID=A3M466_ACIBT Length = 144 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 65/129 (50%), Gaps = 1/129 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R++IT+ + L LD + Y +RS+AI D++ L E Q L+ +Y Sbjct: 6 LARISITVPESTLNALDQKIVEQNYESRSQAIVDMINKHLIAEQAQ-ANEVMVGTLTLLY 64 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + + L +++V Q +++LH+ ++ L++ +++G +++ + I +G Sbjct: 65 DASQMTLRNQLVDLQQQFLAQVISSLHIQLDQQKILQVMLMQGASSELRQISQQFIVLKG 124 Query: 121 VRHGHLQCL 129 V GHL+ + Sbjct: 125 VIKGHLELM 133 >UniRef50_B1M926 Putative transcriptional regulator, CopG family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M926_METRJ Length = 153 Score = 121 bits (304), Expect = 7e-27, Method: Composition-based stats. Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 1/131 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ-GFAVLSYV 59 MQR+T+TLD +L+E +D +++ R Y RSEA+RD+LR LA+ ++ A ++V Sbjct: 1 MQRITVTLDHELVEAVDRIAEVRCYAGRSEAMRDLLRRGLAEARRERDPDHACVATFTFV 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 E RDL R+ Q HDL + + V ++H+ L VL+G + ++ F D + QR Sbjct: 61 AEAGVRDLGQRLAEEQRARHDLVITQVQVPLDHEAALHTLVLRGRVREIHAFVDAIATQR 120 Query: 120 GVRHGHLQCLP 130 GVRH L +P Sbjct: 121 GVRHDSLSIIP 131 >UniRef50_A2BJB5 Nickel responsive regulator n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJB5_HYPBU Length = 137 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 66/123 (53%), Gaps = 2/123 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGT-QGFAVLSYV 59 M ++I+L ++LL+ +D ++ GY +RSE IR+ LR L+Q Q+ T + +A++ + Sbjct: 1 MAVISISLPNNLLDKVDEYIEKYGYTSRSELIREALREYLSQRFPQETFTGKIYAIVVIL 60 Query: 60 YEHE-KRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 HE K + ++++T H + + H + CL IAV++ ++Q + Sbjct: 61 TNHEIKPSVDQKVINTIHSFQTIIKSFYHQLLEGSWCLNIAVVESTWNEIQALVKALRKI 120 Query: 119 RGV 121 +G+ Sbjct: 121 QGI 123 >UniRef50_C7NP61 Transcriptional regulator NikR, CopG family n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NP61_HALUD Length = 172 Score = 119 bits (298), Expect = 3e-26, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 2/120 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGT-QGFAVLSYV 59 + RV++TL ++ + LD + Y +RSEA+RD LR + + + + Sbjct: 13 LDRVSLTLPPEMTDRLDGIVTEWDYASRSEAVRDALRDFFTTYEWEGGDETRHYGTIVIA 72 Query: 60 YEH-EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 +EH D+A R+ + QH + D+ + H+H++ D C+E V+ G G + A+ + A Sbjct: 73 HEHDHDSDVAGRLQTIQHEYADVVTSVQHIHLSEDRCMETLVVDGTAGQIDELANRLRAI 132 >UniRef50_C3N649 Putative nickel-responsive regulator n=10 Tax=Sulfolobus RepID=NIKR_SULIA Length = 133 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 64/125 (51%), Gaps = 4/125 (3%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 ++++I+L +L L+ R+G +RS+ + LR+ L + + + +++ VY+ Sbjct: 4 EKISISLPKELYRELEDFITRKGIPDRSKIFQIALRNYLDENR--EGTEIIYGIINLVYD 61 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 HE + + + QH + D ++TLH+H+N C+E +KG+ + + + RG+ Sbjct: 62 HE--EASEALTEIQHEYKDNIISTLHLHVNERLCIEAIAVKGEKSKLVELNNRLGQIRGI 119 Query: 122 RHGHL 126 L Sbjct: 120 LKARL 124 >UniRef50_A1RQZ3 Transcriptional regulator, CopG family n=4 Tax=Thermoproteaceae RepID=A1RQZ3_PYRIL Length = 132 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 69/133 (51%), Gaps = 5/133 (3%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 ++R++I LDD+L + ++ G NRS I ++ A++ + T ++++ VY Sbjct: 2 VRRISIVLDDELYKEMERYMTEIGEVNRSRFIASLI----AEKVGEAAKTPVASLIAIVY 57 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ-R 119 +HE D+A + QH +D+ HVH++ +CLE+ GD ++ + R Sbjct: 58 DHEVGDVAKHLTEVQHDFNDIIRVATHVHLDERNCLEVIHAVGDAQRIRELTSRISRIGR 117 Query: 120 GVRHGHLQCLPKE 132 G+R+ + +P+E Sbjct: 118 GIRYLKVVNIPRE 130 >UniRef50_B9Z9H3 Putative transcriptional regulator, CopG family n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9Z9H3_NATMA Length = 136 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 64/133 (48%), Gaps = 2/133 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH-GTQGFAVLSYV 59 M +++++ +L++ LDS+++R GY RSE +R+ R L + + Q +S Sbjct: 1 MPVISVSMPAELIDRLDSVAERHGYTGRSEVVREGSRVLLTEFEDDRPANQQLAGTVSVF 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 + E + + + + +H + D + H H+ D CL++ VL+ ++ + A Sbjct: 61 SDFETQPIERELTALRHEYEDSIASITHSHV-GDSCLDVLVLETARDELATVVGKLRAID 119 Query: 120 GVRHGHLQCLPKE 132 GV+ +P E Sbjct: 120 GVQTVEYSLVPLE 132 >UniRef50_A9GSQ5 Putative transcriptional regulator, CopG family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GSQ5_SORC5 Length = 140 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 1/127 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R + +D LL D +GY NRSEA+RD++R+ L + A G + A L+ VY Sbjct: 4 LVRFGVAMDRALLAEFDRRITAQGYENRSEALRDLVRADLTRAALD-EGAEVAATLTLVY 62 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 E E R+L RI + V++L V ++ L++ VLKG ++ A + +G Sbjct: 63 EPEVRELVLRISELEERRAGSLVSSLLVRLDAARLLQVMVLKGRGQELSELAGQLAGAKG 122 Query: 121 VRHGHLQ 127 V L Sbjct: 123 VLSCALT 129 >UniRef50_A6G2I6 Nickel responsive regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G2I6_9DELT Length = 126 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 38/113 (33%), Positives = 70/113 (61%) Query: 13 LETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIV 72 ++ D + G+ NRSEA+RD++R+ L +E + + A ++ +Y+H KR L+ +I Sbjct: 1 MDRFDRFVENSGHGNRSEAVRDLIRARLVEEEWGEGAEEAVASVTLIYDHAKRRLSRQIE 60 Query: 73 STQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGH 125 H HHD+ ++++H+H++ CLE+ VL+G +++H A+ +I GV HG Sbjct: 61 EHGHEHHDVVLSSMHIHVSEHACLEVVVLRGHPDEIKHVANHLIGLPGVLHGR 113 >UniRef50_Q58177 Uncharacterized transcriptional regulator MJ0767 n=9 Tax=Methanococcales RepID=Y767_METJA Length = 135 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 63/131 (48%), Gaps = 7/131 (5%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 ++R++I+ LL+ +D + +++GY++RSE IRD +R + + ++ VY Sbjct: 4 VERISISFPKFLLKEIDEVVKKKGYSSRSELIRDAVRKYVLENNPLNKNETVSGIIIVVY 63 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDC-----LEIAVLKGDMGDVQHFADDV 115 K L +S + H+ + +L+ C +EI V++G+ D+ F +++ Sbjct: 64 NPTKEALEK--MSKLYFEHNKVIKSLNQAYVTTSCGKNAKVEIFVVEGNSKDISKFYEEI 121 Query: 116 IAQRGVRHGHL 126 G + + Sbjct: 122 EKINGKIYDKV 132 >UniRef50_Q2VNK9 Probable nickel responsive regulator n=1 Tax=Methylocapsa acidiphila RepID=Q2VNK9_METAI Length = 139 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 49/105 (46%), Positives = 71/105 (67%), Gaps = 1/105 (0%) Query: 23 RGYNNRSEAIRDILRSALAQEATQQ-HGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDL 81 RGY+NRSEA+RD+ R+ + Q + + A L YVY+H R+LA R+ H HHDL Sbjct: 4 RGYHNRSEAMRDLARAGMQQAGVESSEAGECVAALVYVYDHTVRELAKRLADAHHAHHDL 63 Query: 82 SVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHL 126 SVA+ + ++H C+E+A+L+G G V+ FA+ +IA+RGVRHG L Sbjct: 64 SVASTQIRLDHASCMEVALLRGVTGTVRQFAEHLIAERGVRHGRL 108 >UniRef50_B1L5X4 Putative transcriptional regulator, CopG family n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L5X4_KORCO Length = 136 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 5/120 (4%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ--GFAVLSY 58 + R I++ +L+ LD L + +RS+AI + + +A+ + + Sbjct: 6 VSRTAISIPRELMSDLDDLLSQLNLKSRSKAISEAITLYIAERYWVLSDVEKEVAGAIIM 65 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 VY+H K S I QH + DL +T HVHI+ + C+E+ ++ G + V+ ++ A Sbjct: 66 VYDHHKE---SEITEVQHKYLDLIRSTSHVHIDEERCMEVLMVLGSLSRVRELFKELQAL 122 >UniRef50_D2RX96 Transcriptional regulator NikR, CopG family n=4 Tax=Halobacteriaceae RepID=D2RX96_9EURY Length = 132 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 2/128 (1%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 R + + D+LL D Q G+++RS A+R+ ++ + + T+ G + ++ Sbjct: 1 MRTSFNIPDELLAEFDRTWQTEGFDSRSRAVREAMQEYI-ESHTELETVSGDVTTALAFD 59 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 ++ D+ + QH D+ T H H D CLE +G+ V+ + V Sbjct: 60 YQHEDVIRELHDVQHDFQDVITTTSHTH-EGDWCLETIFCRGEAARVRKLVYRLRDFDAV 118 Query: 122 RHGHLQCL 129 + L Sbjct: 119 GQVKVLLL 126 >UniRef50_A1RZK4 Transcriptional regulator, CopG family n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZK4_THEPD Length = 133 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 68/133 (51%), Gaps = 3/133 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M+R+++T+ D++ + L+ L++R +NRS + D + + +Q + G + + +Y Sbjct: 1 MRRISLTVPDEVYKALEELAERTRISNRSRLVSDAIMAYASQS--LEDGARYAGAIIVLY 58 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H + + + QH + A+LH+H++ D CLE+ ++G+ G +++ + G Sbjct: 59 DHSRGETVYGVTDAQHDYP-EISASLHMHLSEDLCLEVLGVRGEGGRLKNLISALRGVSG 117 Query: 121 VRHGHLQCLPKED 133 V + + Sbjct: 118 VITVQYSLVRLDQ 130 >UniRef50_Q3ITC6 Probable transcription regulator n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3ITC6_NATPD Length = 137 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 3/134 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGT-QGFAVLSYV 59 M V++++ LL+ LD Y+ RSEA+R+ R L + Q T +++ + Sbjct: 1 MPVVSVSMPASLLDRLDEFIDEHDYSGRSEAVREGTRKVLTEFDDQSVPTSPAVCIVAVM 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 ++H+ D S + + +H H +L + +H H CLE+ V +G++ + F V Sbjct: 61 FDHDT-DAESSLSTLRHEHDELVTSNVHSHAGE-ACLELFVAEGEVDAIGTFVSRVRTVD 118 Query: 120 GVRHGHLQCLPKED 133 GV + D Sbjct: 119 GVGSVEYTFVDDND 132 >UniRef50_C7NX71 Transcriptional regulator NikR, CopG family n=2 Tax=Halobacteriaceae RepID=C7NX71_HALMD Length = 136 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 1/119 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL-AQEATQQHGTQGFAVLSYV 59 + R+++TL ++ LD + Y++RSEAIRD LR A E T + V Sbjct: 5 LDRISLTLPAEMTTRLDDIVDDWEYDSRSEAIRDALRDFFGAYEWESADDTVHHGTVVVV 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 ++H +A ++ + QH DL + H+H++HD C+E V++G + A+ + A Sbjct: 65 HDHHVDGIADQLQTIQHEMADLITSVQHIHLSHDTCMETLVVEGAGTAITELANRLRAI 123 >UniRef50_O26703 Putative nickel-responsive regulator 1 n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=NIKR1_METTH Length = 127 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 64/127 (50%), Gaps = 4/127 (3%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH-GTQGFAVLSYV 59 M V+++L + LLE +D+L G++ RS+ IR R + ++ + AVL + Sbjct: 1 MVVVSVSLGEKLLEEIDALRDELGFSGRSDVIRVAARMLIDEKRNLHELNGEINAVLFLI 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 + DL + +H + D+ LH H+ +CLE+ +++G+ V+ A+ +A Sbjct: 61 HPRRVEDL---VTKIKHDYEDIIGTQLHSHLKDGNCLELFIIEGESMRVRELAERFLACG 117 Query: 120 GVRHGHL 126 ++H L Sbjct: 118 KMKHIKL 124 >UniRef50_D1JIB2 Putative nickel responsive regulator 1 n=2 Tax=environmental samples RepID=D1JIB2_9ARCH Length = 127 Score = 97.1 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 57/126 (45%), Gaps = 2/126 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M ++I+L D++L +D L + G++ RSE +R R LA ++ + + Sbjct: 1 MAIISISLTDEILNEIDRLQKELGFSGRSEVMRAGARMLLADNREKEKLEGMLNSVLLLI 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + + + + +H D+ +H H+ D C+E+ +L+GD ++ R Sbjct: 61 --HAQKVEDTVTAIKHEFEDIISTQIHNHLREDKCIEVFILEGDAARIKDLVRLFQTTRK 118 Query: 121 VRHGHL 126 + + L Sbjct: 119 MDYVKL 124 >UniRef50_D2RV27 Transcriptional regulator NikR, CopG family n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RV27_9EURY Length = 160 Score = 96.0 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 20/152 (13%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQ-HGTQGFAVLSYV 59 M V++++ DL++ LD+ + Y RSE +R+ R+ LA+ + V+S Sbjct: 1 MPIVSVSMPADLIDRLDTHAADHDYTGRSEVVRESARTLLAEFEDDRLEDRPLAGVVSVF 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHD----DC---------------LEIAV 100 YE + + R+ +H + D+ +T H H+ C +++ V Sbjct: 61 YEFGSQRVERRVTELRHEYDDVVASTDHGHVGEGCGCPSCDTDRDPESRSEPGYFVDLFV 120 Query: 101 LKGDMGDVQHFADDVIAQRGVRHGHLQCLPKE 132 L+GD+ + F + A V +P + Sbjct: 121 LEGDLEAMSTFVGTLRAIEAVDRVDYSLVPLD 152 >UniRef50_Q7MS86 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MS86_WOLSU Length = 78 Score = 91.7 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 42/72 (58%) Query: 56 LSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDV 115 L+ VY+H +R+L +++ QH+ H + HVHINH +CLE +LKG +++ A + Sbjct: 2 LTIVYDHHQRELNQKMIDIQHNSHIHILCNTHVHINHHNCLETIILKGIPKEIEEIALSI 61 Query: 116 IAQRGVRHGHLQ 127 +GV+ L Sbjct: 62 GGLKGVKFSKLT 73 >UniRef50_Q5V799 Transcriptional regulator n=3 Tax=Halobacteriaceae RepID=Q5V799_HALMA Length = 135 Score = 89.8 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 4/129 (3%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQE-ATQQHGTQGFAVLSYVY 60 R ++ + +D+LE D Q G ++RS AIR+ ++ + ++ + AVL++ Y Sbjct: 1 MRTSLNVSEDILEEFDETWQAEGLDSRSRAIREAMQEYIEGHSQLEEVSGEVVAVLAFDY 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H ++ + S QH D+ H H + CLE GD V+ + G Sbjct: 61 QHH--EVIHDLHSAQHQFQDVIETMSHTH-QGEWCLETVFCHGDAARVRELVYRLRDFDG 117 Query: 121 VRHGHLQCL 129 V L Sbjct: 118 VGRVKTMLL 126 >UniRef50_A4YI93 Transcriptional regulator, CopG family n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YI93_METS5 Length = 128 Score = 87.9 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 6/126 (4%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 ++++++ LD + L L ++ G +RS I+ + LA+ + + F +L+ VY Sbjct: 3 VEKISVALDKETLRRLQRRAEDEGV-SRSRLIQMAVSEYLAEFTGE--DEEVFGILNLVY 59 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 E + D I S +H H ++TLHVH+N C+E +KG +++ A + A Sbjct: 60 EEDGSD---EITSVEHQHEASIISTLHVHVNEKLCMEAIAVKGKRRELERLARRLSAINK 116 Query: 121 VRHGHL 126 V+ L Sbjct: 117 VKKAKL 122 >UniRef50_B8D4E8 Putative transcriptional regulator, CopG family n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D4E8_DESK1 Length = 141 Score = 84.8 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 2/124 (1%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +++ I L DL E + +R G + S +++ LR+ L E + G + +Y+ Sbjct: 13 RKIGIYLPGDLEELVIEYLKRHGGRSISSLVQEALRTYLMSE--EIPGCNLVGYIMVLYK 70 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 H D+ + QH + + H+HI+ + CL +G D + V + RG+ Sbjct: 71 HGMGDIDRELTEIQHEYIGSVLFENHIHIDEERCLMTIAFRGRYSDFESLMKKVRSLRGM 130 Query: 122 RHGH 125 Sbjct: 131 ILVK 134 >UniRef50_A0RWH0 Transcriptional regulator n=3 Tax=Thaumarchaeota RepID=A0RWH0_CENSY Length = 131 Score = 82.5 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 56/126 (44%), Gaps = 2/126 (1%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHE 63 ++++L+ +++ LD L + G+ RSE +R +R+ + +E +Q + + V Sbjct: 8 ISVSLNSEMIRELDKLQESLGFTGRSEIVRAGIRTFVQEEKQKQGMEGKKSAILLVV--H 65 Query: 64 KRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRH 123 + ++ + + L LH I+ C+E+ +L GD ++ + + + Sbjct: 66 ADEFDGQVAGIKRDYEALIRTHLHNTIDGGRCVELFLLDGDAKRIESVTRGFLTNKNMDS 125 Query: 124 GHLQCL 129 L L Sbjct: 126 AKLVIL 131 >UniRef50_D2RG21 Putative transcriptional regulator, CopG family n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RG21_ARCPR Length = 126 Score = 79.8 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 9/129 (6%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M+R +++ +DL + LD L+++ G +RSE +R+ LR+ LA+ + +++ V Sbjct: 1 MRRFGVSIPEDLAKALDDLAEKLGV-SRSEVVREALRTYLAEHTHYTVKHRCCGMITVV- 58 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ-R 119 R + + + ++ H+H+ D C+ V+ GD + ++ Sbjct: 59 ---TRGF-KDLTAVE-KFKEVVNTFSHIHV-EDYCISSFVVYGDSDKIAELHKALLRVSE 112 Query: 120 GVRHGHLQC 128 VR L+C Sbjct: 113 NVRFIPLEC 121 >UniRef50_A2BJM7 Putative nickel responsive regulator n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJM7_HYPBU Length = 139 Score = 74.8 bits (183), Expect = 9e-13, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 3/121 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + + ++L D+L E L SL+QR GY + S+AIRD + +A VL + Sbjct: 2 VVKTGVSLPDELYEKLVSLAQRAGYPSISKAIRDAVELFIAFNTWWSSQGPVTGVLHLLA 61 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 E + S I ++ A L+ + I V++G+ G ++ + RG Sbjct: 62 EAKHG---SEIQEALQDAEEVVEAVLYRRLGASYIAVIVVVEGEPGRIKDLYKKLTRLRG 118 Query: 121 V 121 V Sbjct: 119 V 119 >UniRef50_Q60386 Uncharacterized transcriptional regulator MJ0080 n=4 Tax=Methanocaldococcus RepID=Y080_METJA Length = 127 Score = 74.0 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 53/132 (40%), Gaps = 5/132 (3%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M+R+++T++ +LL+ +D + + +RSE IR L + + ++ +Y Sbjct: 1 MERISLTIEKNLLKEVDEIINKERI-SRSEFIRRALEYYVKKYDWLSRIESKIGEITVIY 59 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 IV + + D+ + +L + + + +KG + F + + Sbjct: 60 N---SKAVEDIVKLESQYKDIVIISLEIPFEG-KIIRMIAIKGQRDRIIEFTNKLKGISS 115 Query: 121 VRHGHLQCLPKE 132 V L + E Sbjct: 116 VELAQLTTISIE 127 >UniRef50_Q9Y8R3 Nickel responsive regulator n=1 Tax=Aeropyrum pernix RepID=Q9Y8R3_AERPE Length = 128 Score = 71.3 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 56/126 (44%), Gaps = 4/126 (3%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + V+++L D L+ +D + G+ +RS+ I+ L++ L E + G+ + + Sbjct: 2 VTVVSVSLPDHLVRKVDRAVEEYGFKSRSDLIKTALQTFLEDEDNKSSGSYRL--IVVLS 59 Query: 61 EHEKRD-LASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 +H+ + IV H + + +A H + C+ IAV+ G D + + + Sbjct: 60 DHKSSPYVDKNIVGLIHSYSEELIALYHQILQGPYCITIAVVGGK-DDWRTIVKKLRSLS 118 Query: 120 GVRHGH 125 GV Sbjct: 119 GVLSVQ 124 >UniRef50_A2BJS7 Predicted transcriptional regulator, NikR n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJS7_HYPBU Length = 137 Score = 66.7 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 58/132 (43%), Gaps = 5/132 (3%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +R ++L + L E LD+L++ G + RS+ + ++ + + V+ V Sbjct: 5 RRFGVSLPERLAEKLDALTRIMGVD-RSKLVERAVQILIEDYEHYIREHTCYGVMIVV-- 61 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG- 120 + + D+ +A+ H H++ C+E+AV++G + ++ Sbjct: 62 PGVDNQHISVGRVFESFRDIVLASSHYHVDGR-CVEVAVVRGPSKKIAELHTELERLGCR 120 Query: 121 VRHGHLQCLPKE 132 VR+ L LP++ Sbjct: 121 VRYVPLAGLPED 132 >UniRef50_A2BMU8 Conserved crenarchaeal protein n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BMU8_HYPBU Length = 126 Score = 64.0 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 56/132 (42%), Gaps = 10/132 (7%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +R I++++ + + L+ LS + G NRS I + ++ L + +L Sbjct: 3 RRFGISINESIAKMLEVLSNQTGV-NRSRLIEEAIKGYLEDHSHLLVPHDCKGILV---- 57 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDV--IAQR 119 + ++ + + ++ VA LH H+N C+E +G+ + ++ + Sbjct: 58 -AHCPASGQLSNITEEYSEVIVAWLHAHLNE-ACMEAFFAEGESRKIMGLYSEILKRGCK 115 Query: 120 GVRHGHLQCLPK 131 G R+ + +P Sbjct: 116 G-RYIPVGNVPP 126 >UniRef50_B1L3A9 Putative transcriptional regulator, CopG family n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L3A9_KORCO Length = 126 Score = 63.6 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 58/130 (44%), Gaps = 9/130 (6%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +R I++ +DLL+ LDSLS+ NRS IR+++ ++ + + +L V Sbjct: 3 RRFGISIPEDLLDKLDSLSREL-MVNRSSLIREMIEESIEDRSHLLTPHECTGILLVV-S 60 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 D + + ++ H H + D C++I ++ ++ ++ +GV Sbjct: 61 RGSEDAGRVLEK----YCKCIISRSHHH-SEDCCVDINFVRAKSEEILKLERELRRIKGV 115 Query: 122 --RHGHLQCL 129 R+ L C+ Sbjct: 116 SERYIPLSCI 125 >UniRef50_A1RWF4 Transcriptional regulator, CopG family n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWF4_THEPD Length = 130 Score = 63.2 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 4/115 (3%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +RV ++LD D+ E L+ +++ +RS + R L ++ V+ Y+ Sbjct: 5 RRVGVSLDGDVFEELERVAKAFN-TDRSHIVNMAAREYLLEKFHYAKPHSCEGVMIISYD 63 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVI 116 + + L V+ H H CLEI LKGD ++ V Sbjct: 64 PARG---QEVAEAIEESKSLVVSRSHFHTGDGCCLEILYLKGDSEEIWLLEKRVS 115 >UniRef50_A3MUX0 Transcriptional regulator, CopG family n=5 Tax=Thermoproteaceae RepID=A3MUX0_PYRCJ Length = 122 Score = 62.1 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 8/117 (6%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ-GFAVLSYV 59 M+R ++L ++ E ++S++ G RSE + + +++ L + VL + Sbjct: 1 MKRFGVSLPKEVAEAVESIAAELGVT-RSEVVANAVQAYLESRRGHAEPSHQCLGVLMAL 59 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVI 116 S + H + +A H+H+ CL I V++GD V+ + +V Sbjct: 60 SNS-----FSDLSDVVERHKEAILAYTHLHVEG-KCLTIFVVRGDGPQVERLSMEVS 110 >UniRef50_A3DLG8 Transcriptional regulator, CopG family n=1 Tax=Staphylothermus marinus F1 RepID=A3DLG8_STAMF Length = 136 Score = 60.5 bits (146), Expect = 2e-08, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 7/128 (5%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +R +++ ++ E LD L++ G ++RS + + LR+ L + + V Sbjct: 5 RRFGVSIPSNIAEALDKLAELTG-SDRSSIVAEALRTYLHDHLHYMVPHKCTGFIIVV-N 62 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG- 120 EK AS ++ D+ H H C+EI + G G + + + Sbjct: 63 KEKNISASIVID---KFKDIIQNYNHTHYRG-KCIEIFFVSGYSGRIAELDKKLRSMGCS 118 Query: 121 VRHGHLQC 128 VR+ LQ Sbjct: 119 VRYIPLQT 126 >UniRef50_UPI0000D54CF8 hypothetical protein P700755_30935 n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D54CF8 Length = 142 Score = 54.8 bits (131), Expect = 8e-07, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 52/135 (38%), Gaps = 6/135 (4%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSY--- 58 Q ++ + D + L+SL +R GY NRS +RD A+ + A + Sbjct: 3 QIISFSADRNFAGDLESLIERSGYANRSRFLRDAA-LFFAEMKQRGELMNIDANIIIEGH 61 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINH--DDCLEIAVLKGDMGDVQHFADDVI 116 + H + +++ ++ +++ + H C+++ ++G D++ + + Sbjct: 62 LVVHYEHGADQKLMVSRTGSIEVAAYHHSSRLGHSCHLCVDVIHVRGAASDIREVYNKLQ 121 Query: 117 AQRGVRHGHLQCLPK 131 V P Sbjct: 122 NTPNVDKVSFTIAPL 136 >UniRef50_Q9YEP4 Putative uncharacterized protein n=1 Tax=Aeropyrum pernix RepID=Q9YEP4_AERPE Length = 128 Score = 54.8 bits (131), Expect = 9e-07, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 47/130 (36%), Gaps = 6/130 (4%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +R +++ +DL + LD S+R G RS + + + L ++ Sbjct: 4 RRFGVSIPEDLAQRLDEASRRLGVE-RSRLVEKAVEALLEDYRHLLTRHSCSGIIIVSCP 62 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR-G 120 I + D+ A LH H C+E +++GD + + + G Sbjct: 63 PRGEA---EIATAVEKFRDIVAARLHSHTTGR-CIEAIIVEGDSMRIAMLHRQLESVGCG 118 Query: 121 VRHGHLQCLP 130 R+ + P Sbjct: 119 ARYISMPLHP 128 >UniRef50_B1L6V8 Putative transcriptional regulator, CopG family n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L6V8_KORCO Length = 81 Score = 53.2 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 29/53 (54%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGF 53 M V+ + + L++ L+ L + G+ ++SEAIR+ +R + + + G + Sbjct: 29 MVVVSFHIPNSLMKELERLVEEVGFTSKSEAIREAIRLLIREYKKKSAGGVAY 81 >UniRef50_Q8ZX60 Putative uncharacterized protein n=1 Tax=Pyrobaculum aerophilum RepID=Q8ZX60_PYRAE Length = 111 Score = 51.7 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 26/43 (60%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQE 43 M +++ + +LE LD L +R + NRSEAIR LR L +E Sbjct: 45 MSLISVHVPKKMLEELDELVRRGIFPNRSEAIRAALRDLLYKE 87 >UniRef50_A1RUT5 Transcriptional regulator, CopG family n=5 Tax=Thermoproteaceae RepID=A1RUT5_PYRIL Length = 76 Score = 51.3 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 26/43 (60%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQE 43 M +++ + +LE LD L +R + NRSEAIR LR L +E Sbjct: 10 MSLISVHVPKKMLEELDELVRRGIFPNRSEAIRAALRDLLYKE 52 >UniRef50_C0G2W8 CopG domain protein DNA-binding domain protein n=1 Tax=Natrialba magadii ATCC 43099 RepID=C0G2W8_NATMA Length = 118 Score = 49.8 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 23/38 (60%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRS 38 M ++ + + LLE LD L+ Y NRSE IR++LR Sbjct: 37 MVKLNVKVPKRLLEELDELAAELNYTNRSEFIREVLRD 74 >UniRef50_Q9HHW8 Vng6193h n=3 Tax=Halobacterium salinarum RepID=Q9HHW8_HALSA Length = 92 Score = 49.8 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 25/40 (62%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL 40 M+++ + + LL +D + + RGY +SE IRD LR A+ Sbjct: 13 MEKINVRVPQSLLAQVDEVWEERGYATKSEFIRDALRDAV 52 >UniRef50_C6A437 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain n=10 Tax=Thermococcaceae RepID=C6A437_THESM Length = 63 Score = 49.4 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 28/51 (54%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ 51 M+ +++ L L+ LD L +R Y NRSEAIR+ +R + +E + Sbjct: 4 MKIISVQLPQGLINALDVLVRRGVYPNRSEAIREAIRELVKRELYVMESEE 54 >UniRef50_Q2RPB0 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain n=4 Tax=Alphaproteobacteria RepID=Q2RPB0_RHORT Length = 87 Score = 49.0 bits (116), Expect = 5e-05, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 26/53 (49%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGF 53 ++R+TIT+ DL E L Y + SE +R+ LR + + Q+ + Sbjct: 4 VERMTITMPKDLAEALRQTVAGGEYASTSEVVREALRDWMGRRDAQRPDLETV 56 >UniRef50_A4J8J6 Transcriptional regulator, CopG family n=6 Tax=Firmicutes RepID=A4J8J6_DESRM Length = 91 Score = 48.2 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG 52 ++R+ I+L D LLE +D++ + NRSE IR+ ++ +A+ + Q Sbjct: 6 IKRIMISLPDSLLEEVDNIVEEERV-NRSEFIREAMKLYIAERKRRLLREQM 56 >UniRef50_Q9HHQ0 Vng6288c n=2 Tax=Halobacterium salinarum RepID=Q9HHQ0_HALSA Length = 92 Score = 47.8 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 24/38 (63%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRS 38 M ++ + + LL+ LD LS+ Y NRSE IR++LR Sbjct: 15 MVKLNVKVPKRLLDELDELSEELNYTNRSEFIREVLRD 52 >UniRef50_Q4JBZ9 Conserved protein n=4 Tax=Sulfolobus RepID=Q4JBZ9_SULAC Length = 65 Score = 47.8 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 25/39 (64%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ 42 ++ LDDD L+ +D + + GY NRS+ IRD + +++ Sbjct: 22 ISFKLDDDFLQEVDKMVRLLGYTNRSDLIRDAILEYISE 60 >UniRef50_D0U4G3 CopG/Arc/MetJ family n=1 Tax=uncultured SUP05 cluster bacterium RepID=D0U4G3_9GAMM Length = 75 Score = 47.1 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 23/41 (56%) Query: 6 ITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQ 46 I+L D L +D GY + SE IRD++R A+EA + Sbjct: 3 ISLPDQLKSHIDQRVSHDGYGSSSEFIRDLIRKDQAEEAEK 43 >UniRef50_Q7NGA1 Gll3272 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NGA1_GLOVI Length = 101 Score = 47.1 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFA 54 T+ L DLLE +D QR + +RSE + LR LA + + + A Sbjct: 14 TTLALPADLLEAIDREVQRGAFRSRSEFVTFALRRELAAQERARIDAEFAA 64 >UniRef50_C1V617 Transcriptional regulator, CopG family n=12 Tax=Halobacteriaceae RepID=C1V617_9EURY Length = 59 Score = 47.1 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGT 50 M+RVT+ + +E ++ + + + NRSEAIR +R L ++ + + Sbjct: 1 MERVTLRIPKQQIEEVERMVETGEFPNRSEAIRSAVREMLNEQQVEGRES 50 >UniRef50_D2PD24 CopG domain protein DNA-binding domain protein n=9 Tax=Sulfolobus RepID=D2PD24_SULIS Length = 50 Score = 47.1 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGT 50 M+ +T+ L + LE +D L Y +RSE IR + + +E Sbjct: 1 MKIITVKLPEQFLEAIDELVNTGRYGSRSEVIRAAIGDFIRKELWVTTEE 50 >UniRef50_A1RWD2 Transcriptional regulator, CopG family n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWD2_THEPD Length = 82 Score = 47.1 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 24/38 (63%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALA 41 V++ L L++ LD L Q+ + NRS+AIR+ +R L Sbjct: 26 VSVKLPVGLIDALDELIQKGYFQNRSDAIREAIRKLLT 63 >UniRef50_Q5JJ81 Transcription regulator, CopG/RepA family n=1 Tax=Thermococcus kodakarensis RepID=Q5JJ81_PYRKO Length = 80 Score = 46.7 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 27/49 (55%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ 51 +V++ L L E +DSL + ++NRS+ I++ +R L + + + Sbjct: 6 KVSVRLPPKLAEEIDSLVKAGLFSNRSDLIKEAIRHYLRELRKELTEEE 54 >UniRef50_A2BJ34 Transcriptional regulator n=6 Tax=Thermoprotei RepID=A2BJ34_HYPBU Length = 65 Score = 46.7 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 27/51 (52%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ 51 M+ VT+ + + LE LD L + Y++RSEAIR +R L +E Sbjct: 1 MRLVTVKMPETYLEGLDELVKMGRYSSRSEAIRIAVRELLKRELWGIPEHP 51 >UniRef50_Q2RGI4 Transcriptional regulator, CopG family n=11 Tax=Clostridia RepID=Q2RGI4_MOOTA Length = 91 Score = 45.5 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 5/54 (9%) Query: 1 MQRVTITLDDDLLETLDSL--SQRRGYNNRSEAIRDILRSALAQEATQQHGTQG 52 ++R+ I+L + LL +D L ++R NRSE IR+ ++ + + + Q Sbjct: 4 VKRIMISLPESLLAEVDGLANLEKR---NRSEFIREAMKLYITERKRRNIREQM 54 >UniRef50_Q6X3J4 NikR family transcriptional regulator protein-like protein n=12 Tax=cellular organisms RepID=Q6X3J4_PSEAE Length = 110 Score = 45.1 bits (106), Expect = 7e-04, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 10/79 (12%) Query: 6 ITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKR 65 + L D L + ++ L + Y NRSE IR LR L QEA + + Sbjct: 26 VVLPDPLEQDINELVETGRYQNRSEVIRAGLRLLLQQEAQNSAKLEAL----------RN 75 Query: 66 DLASRIVSTQHHHHDLSVA 84 +S ++ + +D + Sbjct: 76 ATSSGLMQLERGEYDEITS 94 >UniRef50_A4YIW8 Putative transcriptional regulator, CopG/Arc/MetJ family n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YIW8_METS5 Length = 48 Score = 44.7 bits (105), Expect = 9e-04, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 22/45 (48%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEAT 45 M+ +T+ L + LE +D L Y RSE IR + + +E Sbjct: 1 MKIITVKLPEQFLEAMDELVNTGRYETRSEVIRAAIGDFIRKELW 45 >UniRef50_B9ZCU1 Putative transcriptional regulator, CopG family n=2 Tax=Natrialba magadii ATCC 43099 RepID=B9ZCU1_NATMA Length = 93 Score = 44.0 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGT 50 ++ + + LLE +D +RRG +RSEA+RD LR + T Sbjct: 16 KIDVRVPSRLLEKIDEEYERRGDTSRSEAVRDALRDWIDPPTRLSDET 63 >UniRef50_D2EEU4 Nucleotidyl transferase n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEU4_9EURY Length = 274 Score = 44.0 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 26/44 (59%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEAT 45 R + T+D D++ LDSL Y ++SEA+ DILR ++ T Sbjct: 3 ARTSFTIDADVVAKLDSLVDNIYYRSKSEAVEDILRKYFEKQNT 46 >UniRef50_C5A3Q2 Transcription regulator, copG/nikR family n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A3Q2_THEGJ Length = 94 Score = 43.6 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 23/39 (58%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL 40 +V++ L+ +D L ++ +++RSE I++ +R L Sbjct: 11 DKVSVRFPSGLMRQIDELVEKGEFSSRSELIKEAVRFFL 49 >UniRef50_C0QKL9 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKL9_DESAH Length = 93 Score = 43.2 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 6/58 (10%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYV 59 +R+TITL D+L ++ Y + SE IR+ +R Q+ + A +S + Sbjct: 7 ERITITLPPDMLASIKKEVSSGSYGSTSELIREAMR------MWQKREEEYKARISLI 58 >UniRef50_B7NEP0 Putative uncharacterized protein n=1 Tax=Escherichia coli UMN026 RepID=B7NEP0_ECOLU Length = 136 Score = 43.2 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 2 QRVTITLDDDLLETLDSLSQRR-GYNNRSEAIRDILRSAL 40 +R+ IT+ LL +D+ + Y NRS + + R L Sbjct: 94 ERINITMPKRLLNKIDTYVRNNPDYANRSAFLAEAARRVL 133 >UniRef50_Q3IM20 Homolog to transcription regulator n=4 Tax=Halobacteriaceae RepID=Q3IM20_NATPD Length = 85 Score = 42.8 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 23/40 (57%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL 40 M +T+ + + L+ LD+ + + +RSE IR LR A+ Sbjct: 1 MTTITLKIPEAFLDDLDATWRAEDFPSRSEFIRWALRDAV 40 >UniRef50_Q7V1J7 Possible DnaJ domain n=1 Tax=Prochlorococcus marinus subsp. pastoris str. CCMP1986 RepID=Q7V1J7_PROMP Length = 337 Score = 42.4 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 22/43 (51%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA 44 +R++I L ++L+ D L + G+ R I +L L +E Sbjct: 10 KRISIDLPEELVSRFDQLRKEWGFRARGPVIEKLLTEILQEEE 52 >UniRef50_B0TE83 Helix-turn-helix domain protein, copg family, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TE83_HELMI Length = 89 Score = 42.4 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQ 46 ++R+ +TL + LL+ LD + NRS+ IR+ + +++ + Sbjct: 4 LKRIQVTLPESLLDELDRVLMAEK-MNRSQLIREAVNLYMSEHKRK 48 >UniRef50_C3N733 Putative transcriptional regulator, CopG family n=1 Tax=Sulfolobus islandicus Y.G.57.14 RepID=C3N733_SULIY Length = 55 Score = 42.4 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Query: 4 VTITLDDDLLETLDSLSQ--RRGYNNRSEAIRDILRSALAQ 42 VT+++ +L + +D L + GY +R E + D +R + + Sbjct: 11 VTVSIPVELAKQIDELVASGKGGYVSRQEFVADAIRRRIEE 51 >UniRef50_B0RYF6 Putative uncharacterized protein n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RYF6_XANCB Length = 110 Score = 42.4 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 21/37 (56%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILR 37 M + I+L D+L E +D Y + SE +R+++R Sbjct: 31 MATMNISLPDELKEFVDQQVLEHAYGSSSEYLRELIR 67 >UniRef50_B5Y6F5 Ribbon-helix-helix protein, CopG family n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6F5_COPPD Length = 102 Score = 42.4 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQ 47 +T ++ ++ + +D L+++ RSE IR+ +R +A+E Q Sbjct: 30 AVLTFSVPPEMGKMIDDLAKQEN-RTRSELIREAIRRYIAEEKWAQ 74 >UniRef50_A1JJS5 Putative uncharacterized protein n=4 Tax=Yersinia RepID=A1JJS5_YERE8 Length = 135 Score = 42.4 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Query: 3 RVTITLDDDLLETLDSLSQR-RGYNNRSEAIRDILRSALAQ 42 + +T+ +LL +D RGY NRS+ + ++ R +A+ Sbjct: 95 KFNLTMSQNLLTAIDKFIATHRGYKNRSQFLAELARERIAR 135 >UniRef50_C7NYG6 Putative uncharacterized protein n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7NYG6_HALMD Length = 133 Score = 42.4 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 22/33 (66%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDIL 36 V+ + DDDL++ DS + Y +RSEA+R ++ Sbjct: 9 VSFSADDDLVDAFDSWVEESQYGSRSEALRTLM 41 >UniRef50_B8D3L5 Putative transcriptional regulator, CopG family n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D3L5_DESK1 Length = 132 Score = 42.0 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 46/110 (41%), Gaps = 8/110 (7%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +R +++ + E LD+L+ + +RS + + L + + + + V+ Sbjct: 7 KRFGVSVPYHVAEKLDNLAG-LFHCDRSTIVSNALNEYIHENLHEDREHKCRGVIVV--- 62 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHF 111 + + L S I+S + + + VH ++ + + +++G + Sbjct: 63 YSQSPLPSSIIS----RYSSVITSYSVHRMGNEFIIVIIVEGSSKLISEL 108 >UniRef50_Q4KEL3 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=Q4KEL3_PSEF5 Length = 90 Score = 41.7 bits (97), Expect = 0.008, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 22/38 (57%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRS 38 M + I+L D L +D +RGY+ SE +R+++R Sbjct: 13 MSTMNISLPDALKSFVDDQVSQRGYSTSSEYVRELIRK 50 >UniRef50_C0ZK25 Antitoxin EndoAI n=6 Tax=Firmicutes RepID=C0ZK25_BREBN Length = 99 Score = 41.7 bits (97), Expect = 0.008, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG 52 +R+ I+L LL+ +D + Q+ +NRSE IR + L + + Sbjct: 14 KRIMISLPQHLLQEVDGVIQKEK-SNRSEFIRQAMHLYLKERKKRTIRETM 63 >UniRef50_B0SBS5 Transcriptional regulator n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SBS5_LEPBA Length = 81 Score = 41.7 bits (97), Expect = 0.008, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL 40 V I+ + LL+ +D +R + +RSE IR+ R+ + Sbjct: 5 VNISFEKALLKEIDK-IAKREHRSRSELIREAARAYI 40 >UniRef50_D2PF81 CopG domain protein DNA-binding domain protein n=9 Tax=Sulfolobus RepID=D2PF81_SULIS Length = 89 Score = 41.3 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 25/37 (67%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL 40 ++ L+D+ ++ +D++++ GY NRS+ IRD + L Sbjct: 35 ISFKLEDEFIKEVDNVARNLGYTNRSDFIRDAIIYYL 71 >UniRef50_D1TR69 Toxin-antitoxin system, antitoxin component, HicB family n=25 Tax=Yersinia RepID=D1TR69_YERPE Length = 135 Score = 41.3 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 3 RVTITLDDDLLETLDSLSQR-RGYNNRSEAIRDILRSALA 41 + +T+ +LL +D RGY NRS+ + ++ R + Sbjct: 95 KFNLTMSQNLLTAIDKFIATNRGYKNRSQFLAELAREKII 134 >UniRef50_B5ISV0 Ribbon-helix-helix protein, copG family n=1 Tax=Thermococcus barophilus MP RepID=B5ISV0_9EURY Length = 92 Score = 41.3 bits (96), Expect = 0.010, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 24/42 (57%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA 44 ++T+ + + + +D L + Y+NRSE +++ LR + + Sbjct: 7 KITVRIPAGIAKMIDELVEAGLYSNRSEVVKEALREFVLSKK 48 >UniRef50_B5IWL3 Ribbon-helix-helix protein, copG family n=1 Tax=Thermococcus barophilus MP RepID=B5IWL3_9EURY Length = 119 Score = 41.3 bits (96), Expect = 0.010, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 24/35 (68%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDIL 36 ++++I+L +L+E LD L ++ Y RSE IR+ L Sbjct: 6 KKLSISLPPELVELLDVLVEKGLYATRSEIIREAL 40 >UniRef50_C7P3M0 Putative transcriptional regulator, CopG family n=2 Tax=Halobacteriaceae RepID=C7P3M0_HALMD Length = 95 Score = 41.3 bits (96), Expect = 0.011, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 24/40 (60%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL 40 + R+ + + L+ +D + RG+N+RSE IR LR ++ Sbjct: 17 IDRINLRISRSFLDVVDETWRERGFNSRSEFIRYALRDSV 56 >UniRef50_A6VCR0 Putative addiction module antidote protein, family n=7 Tax=Proteobacteria RepID=A6VCR0_PSEA7 Length = 107 Score = 41.3 bits (96), Expect = 0.011, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 21/38 (55%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRS 38 M + I+L D L +D +RGY SE +R+++R Sbjct: 30 MSTMNISLPDTLKSFVDEQVSQRGYGTSSEYVRELIRK 67 >UniRef50_Q9F560 YcfB protein n=9 Tax=Gammaproteobacteria RepID=Q9F560_ECOLX Length = 145 Score = 40.9 bits (95), Expect = 0.012, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Query: 2 QRVTITLDDDLLETLDSLSQRRG--YNNRSEAIRDILRSALAQE 43 QR+ I+L D L+ +D + G Y +RS + R LA + Sbjct: 102 QRINISLPDVLIRRIDGYVRESGGVYKDRSHFLAQAARHELAYK 145 >UniRef50_B2A572 Transcriptional regulator, CopG family n=3 Tax=Clostridia RepID=B2A572_NATTJ Length = 90 Score = 40.9 bits (95), Expect = 0.013, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSA 39 +R+ I+L ++LLE +D + +RSE +R +R Sbjct: 5 ERIMISLPENLLEEIDGIVSNEQ-CSRSEFVRKAMRLY 41 >UniRef50_B8G285 Putative transcriptional regulator, CopG family n=4 Tax=Clostridia RepID=B8G285_DESHD Length = 92 Score = 40.9 bits (95), Expect = 0.014, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG 52 +R+ I+L ++LL +D + NRSE IR+ + S L + + Q Sbjct: 5 KRIMISLPENLLAEVDDVVTLEN-RNRSEFIREAINSVLHERRKRGIREQM 54 >UniRef50_B7KL55 Putative transcriptional regulator, CopG family n=2 Tax=Cyanothece RepID=B7KL55_CYAP7 Length = 114 Score = 40.9 bits (95), Expect = 0.014, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 21/97 (21%) Query: 4 VTITLDDDLLETLDSLSQ------RRG-YNNRSEAIRDILRSALAQEATQQHGTQGFAVL 56 V+I + + LE LD+L+Q RRG + NRS+ I D + LA + Sbjct: 7 VSIRIPAETLERLDNLAQNLYPSRRRGKHPNRSQVILDAIEEYLANHEAETVDE------ 60 Query: 57 SYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHD 93 L ++ +H ++ +I+ Sbjct: 61 --------PSLEEQVNQILQQYHKHLEQSIKEYIDEK 89 >UniRef50_B3T8I8 Putative Ribbon-helix-helix protein, copG family protein n=1 Tax=uncultured marine microorganism HF4000_APKG5H11 RepID=B3T8I8_9ZZZZ Length = 87 Score = 40.9 bits (95), Expect = 0.014, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGF 53 M ++ I+L D++L+ ++ RG +RSE R + L +E ++ + Sbjct: 1 MAKIAISLPDEVLDAVEKERSERGI-SRSEYFRRTVEEHLRREKEKEDDARYI 52 >UniRef50_A3DIW8 Putative transcriptional regulator, CopG family n=5 Tax=Clostridium RepID=A3DIW8_CLOTH Length = 58 Score = 40.5 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEAT 45 ++++ I+L D+LL+ +DS+ NRSE +R+ ++ + ++ Sbjct: 4 LKKILISLPDNLLKEVDSIVAMEKI-NRSEFVREAMKLYIREKRR 47 >UniRef50_C3JNM8 Hypothetical transcriptional regulator n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JNM8_RHOER Length = 70 Score = 40.5 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 17/35 (48%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILR 37 + TI+L D+ LD + G RS IR LR Sbjct: 4 KFTISLPDEDAHLLDEYVRDHGLRGRSAGIRAALR 38 >UniRef50_D2RGK0 Putative transcriptional regulators, CopG/Arc/MetJ family n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RGK0_ARCPR Length = 57 Score = 40.5 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 28/45 (62%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEAT 45 M+++++ L D E L++L Y + SEAIRD +R +A++A Sbjct: 1 MKKISVRLTDQHYEMLETLVAIGEYASVSEAIRDAIRKLIAEKAE 45 >UniRef50_Q2FN54 Transcriptional regulator, CopG family n=3 Tax=Methanomicrobiales RepID=Q2FN54_METHJ Length = 56 Score = 40.5 bits (94), Expect = 0.017, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 27/46 (58%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQ 46 M+R+TI L + + L+ + + + SEAIRD +R + + AT+ Sbjct: 1 MKRITIRLPEQQITLLEKMVEAGEFPTVSEAIRDAVRMLIEKRATR 46 >UniRef50_A1RUY5 Putative transcriptional regulators, CopG/Arc/MetJ family n=5 Tax=Thermoproteaceae RepID=A1RUY5_PYRIL Length = 65 Score = 40.5 bits (94), Expect = 0.018, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 21/40 (52%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL 40 M ++ + +E LD L + Y +RSEAIR LR L Sbjct: 18 MILISFHVPQSYVEILDELVKMGFYPSRSEAIRAALRELL 57 >UniRef50_C7NV28 Putative transcriptional regulator, CopG family n=2 Tax=Halobacteriaceae RepID=C7NV28_HALUD Length = 94 Score = 40.1 bits (93), Expect = 0.020, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAV 55 V I + + L +D+ + +G+N+RSE IR +LR AL + + Sbjct: 13 VNIRMTESFLADVDTTWEDQGFNSRSEFIRAVLRDALKHPEFNRADLKAMLT 64 >UniRef50_C8SCV4 Putative transcriptional regulator, CopG/Arc/MetJ family n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SCV4_FERPL Length = 63 Score = 40.1 bits (93), Expect = 0.024, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 27/53 (50%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGF 53 M++V+I L + E L+SL Y N SE IRD +R + + + ++ Sbjct: 1 MKKVSIRLTEKQYEFLESLVISGEYANVSEVIRDAIRYFMKAKMKEMSESEKV 53 >UniRef50_Q3JAU9 Helix-turn-helix protein, CopG family n=6 Tax=Bacteria RepID=Q3JAU9_NITOC Length = 80 Score = 40.1 bits (93), Expect = 0.025, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 27/52 (51%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGF 53 ++ IT+D +L +D L ++ +++RS+AI + + + A + + Sbjct: 4 AKIAITIDKPILARIDRLVAKQVFSSRSQAIEAAVEEKIERLAHGRLARECA 55 >UniRef50_A8A8K7 Putative transcriptional regulator, CopG family n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8K7_IGNH4 Length = 125 Score = 39.7 bits (92), Expect = 0.027, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 25/69 (36%), Gaps = 1/69 (1%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R + L +L E LD +++R +RS+ I + + + + + Sbjct: 5 RFGVALPKELAERLDEVAERLNV-SRSKVIEMATSAFINYLEALEDPNKATIFVVIAPAS 63 Query: 63 EKRDLASRI 71 E + + Sbjct: 64 ELEKVVRAL 72 >UniRef50_A5KTC8 Putative transcriptional regulator, CopG family n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KTC8_9BACT Length = 93 Score = 39.7 bits (92), Expect = 0.028, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSY 58 + I+L +L++ +DS + + Y +RS+ IR L L + Q LS Sbjct: 6 INISLPKELIKEIDS-AAKAEYASRSDYIRQALVGKLKSDKAQSDDWDLLEALSV 59 >UniRef50_B9DXM3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B9DXM3_CLOK1 Length = 167 Score = 39.7 bits (92), Expect = 0.029, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 5/117 (4%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R ++ ++LE D L ++ +R+E + + LR +Q+ LS V Sbjct: 39 RTGFYIEKEVLERCDELLEQANVKSRNEFVTEALRFYCGYLISQKIENYLLQSLSSVLVS 98 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHV----HINHDDCLEIAVLKGDMGDVQHFADDV 115 RD +R+ HV H D L+ LK + +V+ + Sbjct: 99 TIRDTENRLARMDFKIATELSKLSHVVAYTHAVDDQALQSLHLK-CVEEVKRINGAI 154 >UniRef50_B2AG39 Antitoxin of a toxin/antitoxin system n=20 Tax=root RepID=B2AG39_CUPTR Length = 92 Score = 39.7 bits (92), Expect = 0.030, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 26/43 (60%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA 44 Q++++TL ++ + + + Y + SE IRD LR+ LA++ Sbjct: 5 QQLSVTLPTEMAQAVKDKVRSGEYASESEVIRDGLRALLARDR 47 >UniRef50_D2PEH6 CopG domain protein DNA-binding domain protein n=6 Tax=Sulfolobus islandicus RepID=D2PEH6_SULIS Length = 74 Score = 39.7 bits (92), Expect = 0.032, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 24/37 (64%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL 40 +T L++++L +D + ++ GY+ RS+ IRD + + Sbjct: 22 ITFKLEENILSMVDEIVKKLGYDYRSDFIRDAIEKYI 58 >UniRef50_Q18DN8 Putative uncharacterized protein n=4 Tax=Halobacteriaceae RepID=Q18DN8_HALWD Length = 130 Score = 39.4 bits (91), Expect = 0.035, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 8 LDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVL 56 L + LE +D Q RG+N+RSE IR LR A+ E + A+L Sbjct: 58 LTESFLEQIDDTWQGRGFNSRSEFIRYTLRDAV--EFPTFDRDELVALL 104 >UniRef50_C7NQV1 Putative uncharacterized protein n=2 Tax=Halobacteriaceae RepID=C7NQV1_HALUD Length = 108 Score = 39.4 bits (91), Expect = 0.037, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 25/53 (47%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGF 53 M R T T+ DDL + ++ + N+S+AIR +LR + ++ Sbjct: 1 MSRTTATIPDDLTDLMEGAVDAGVFENKSDAIRHVLREYFEEHPNERVAAAIA 53 >UniRef50_B5INF8 Putative uncharacterized protein n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5INF8_9CHRO Length = 105 Score = 39.4 bits (91), Expect = 0.037, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 5/37 (13%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRS 38 +RVT+T+ DL+ +D + NRS I D +R Sbjct: 9 ERVTVTMPADLIAGIDRFER-----NRSRFIADAVRH 40 >UniRef50_Q573G1 Putative zinc finger protein ORF104b n=1 Tax=Acidianus filamentous virus 2 RepID=Y104B_AFV2 Length = 104 Score = 39.4 bits (91), Expect = 0.037, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL-AQEATQQHGTQGFAVLS 57 M+R++ ++D+L LD S + RSEAIR ILR L + G ++ Sbjct: 1 MKRISFKVEDELARNLDKYSMQNHLT-RSEAIRQILREKLSIMQIPTDKGKVVSGIII 57 >UniRef50_A2SRF9 Transcriptional regulator, CopG family n=2 Tax=Methanomicrobiales RepID=A2SRF9_METLZ Length = 61 Score = 39.0 bits (90), Expect = 0.042, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 23/43 (53%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQE 43 M R+TI L +E L+ L + + SEA+R +R L+Q Sbjct: 1 MDRITIRLPPQQVELLEKLVESGEFPTVSEAVRYAVREFLSQR 43 >UniRef50_A1T480 Putative transcriptional regulator, CopG family n=2 Tax=Actinomycetales RepID=A1T480_MYCVP Length = 76 Score = 39.0 bits (90), Expect = 0.043, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 21/36 (58%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILR 37 +++I+L +D + +D+ G +RS AI+ +R Sbjct: 1 MKISISLSEDEIALVDAYVDHAGLPSRSAAIQKAIR 36 >UniRef50_C8SLQ5 Putative addiction module antidote protein, CopG/Arc/MetJ family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SLQ5_9RHIZ Length = 91 Score = 39.0 bits (90), Expect = 0.044, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 5 TITLDDDLLETLDSLSQRRGYNNRSEAIRDILRS 38 +ITL +L + +D + Y + SE IRD LR Sbjct: 8 SITLSPELAQAVDDVVAAGEYASASEVIRDALRQ 41 >UniRef50_B4ET85 Phage protein n=27 Tax=Enterobacteriaceae RepID=B4ET85_PROMH Length = 137 Score = 39.0 bits (90), Expect = 0.044, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Query: 2 QRVTITLDDDLLETLDSLSQRR-GYNNRSEAIRDILRSALAQE 43 +R+ ITL LL +D++ + Y +RS I R L + Sbjct: 94 ERINITLPHRLLSRIDTIVKTNPEYGSRSGFIATATRKELQKN 136 >UniRef50_B1YCN5 Putative transcriptional regulator, CopG family n=3 Tax=Thermoproteaceae RepID=B1YCN5_THENV Length = 71 Score = 39.0 bits (90), Expect = 0.047, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 23/48 (47%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH 48 ++R+ I +LL +D L +R + NRS ++ + L Q+ Sbjct: 10 LERIAIRFPSELLMRMDKLVERGVFKNRSHLVKAAIEELLRDPKYQEA 57 >UniRef50_Q0YTZ6 CopG-like DNA-binding n=3 Tax=Chlorobium RepID=Q0YTZ6_9CHLB Length = 84 Score = 39.0 bits (90), Expect = 0.049, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQE 43 V I D LL+ +D R+ + +RSE IR+ R + + Sbjct: 7 VNIAFQDSLLDQIDKT-ARKEFRSRSELIREAARLYIERR 45 >UniRef50_UPI0001C31469 putative transcriptional regulator, CopG family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31469 Length = 77 Score = 39.0 bits (90), Expect = 0.049, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH 48 M +V I+L DDLLE D+ +QRR RS +R++ LA + + Sbjct: 1 MAKVMISLPDDLLERFDTYAQRRR-TTRSGLLRELAEHELAANSDARR 47 >UniRef50_C5SJ89 Putative addiction module antidote protein, CopG/Arc/MetJ family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SJ89_9CAUL Length = 86 Score = 39.0 bits (90), Expect = 0.049, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQ------HGTQGFA 54 M + +I++ D + T+ ++ YNN SE RD++R ++A + + Sbjct: 1 MAKFSISMTDRMALTVQRRVEQGDYNNVSEYFRDLVRRDEEKQAAEDRLRDMLDKAEASG 60 Query: 55 VLSYVYEHEKRDLASRIVSTQHHHH 79 V +++ D R + Q H Sbjct: 61 VSDVSFDNIWNDAEERYLKRQAAKH 85 >UniRef50_B9JBH5 CopG/Arc/MetJ DNA-binding domain-containing transcriptional regulator n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JBH5_AGRRK Length = 90 Score = 39.0 bits (90), Expect = 0.051, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 23/44 (52%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEAT 45 ++++I+L +++ + S Y + SE +R +R L +E Sbjct: 3 EKLSISLPSEMVAAIKSRVDAGAYASTSEVLRAAVRVWLREEEE 46 >UniRef50_A2BM81 Putative uncharacterized protein n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BM81_HYPBU Length = 103 Score = 39.0 bits (90), Expect = 0.051, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 20/34 (58%) Query: 8 LDDDLLETLDSLSQRRGYNNRSEAIRDILRSALA 41 L+ +++E LD + GY +RSE IR+ + + Sbjct: 26 LEVEIIEELDRTWRALGYTSRSEFIREAILYYMQ 59 >UniRef50_B5IQ88 Ribbon-helix-helix protein, copG family n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IQ88_9CHRO Length = 74 Score = 39.0 bits (90), Expect = 0.054, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHG 49 + + ++ +L LD L+++ G +RS IR+ +R L + + Sbjct: 1 MVIGVRVEPELERQLDQLARQLG-KSRSACIREAIRQYLLRHGDAEEA 47 >UniRef50_Q18EA8 Putative uncharacterized protein n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18EA8_HALWD Length = 63 Score = 38.6 bits (89), Expect = 0.057, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 25/53 (47%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGF 53 M R+T++ DDL ++ + + + +S+A+R+ +R ++ Sbjct: 1 MPRITVSYPDDLDFLIEGVVEAGVFGGKSDALREFVREYFEDHENERIAAAVT 53 >UniRef50_Q18GU1 Putative uncharacterized protein n=6 Tax=Halobacteriaceae RepID=Q18GU1_HALWD Length = 70 Score = 38.6 bits (89), Expect = 0.063, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 31/71 (43%), Gaps = 10/71 (14%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHE 63 T+++ DL +D + +++ S+ +R +LRS + Q + T+ E Sbjct: 5 TTVSVPKDLAARVDETIEGTSFSSTSDLVRFLLRSIVIQHQREGQLTEA----------E 54 Query: 64 KRDLASRIVST 74 D+A ++ Sbjct: 55 FEDIAEQLSDL 65 >UniRef50_Q3KFX5 Putative phage-related protein n=3 Tax=Pseudomonas RepID=Q3KFX5_PSEPF Length = 134 Score = 38.6 bits (89), Expect = 0.065, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 19/42 (45%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQE 43 ++V +TL +++ +D + +RS + D L + Sbjct: 93 EKVNVTLPGYVIQRIDRYVREHNVKSRSSFLADAAMEKLVRH 134 >UniRef50_C6MCQ4 Putative addiction module antidote protein, CopG/Arc/MetJ family n=2 Tax=Nitrosomonas sp. AL212 RepID=C6MCQ4_9PROT Length = 98 Score = 38.6 bits (89), Expect = 0.068, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAV 55 ++++ITL D+L + + Y + SE IR +R L Q ++H + A+ Sbjct: 8 EKISITLPPDMLNIIREKVKDGAYASTSEVIRAAMR--LWQRQEEEHHARIAAI 59 >UniRef50_C7BK45 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C7BK45_PHOAA Length = 135 Score = 38.2 bits (88), Expect = 0.074, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Query: 6 ITLDDDLLETLDSLS-QRRGYNNRSEAIRDILRSALAQE 43 IT+ LL +D R Y++RS + ++ R L++ Sbjct: 96 ITMPQFLLGRIDKYVNSHREYHSRSGFLAELARRELSKH 134 >UniRef50_Q59073 Uncharacterized protein MJ1679 n=1 Tax=Methanocaldococcus jannaschii RepID=Y1679_METJA Length = 97 Score = 38.2 bits (88), Expect = 0.075, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 22/39 (56%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ 42 +T+ + ++ +D L + +++R E +R +R +L + Sbjct: 6 ITLKIPKSIVNQIDELIKEGYFSSRDEFVRYAVRESLTE 44 >UniRef50_D1JAG3 Putative uncharacterized protein n=2 Tax=uncultured archaeon RepID=D1JAG3_9ARCH Length = 79 Score = 38.2 bits (88), Expect = 0.076, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 21/35 (60%) Query: 8 LDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ 42 + + + +D L + Y +RS+AIRDI+R AQ Sbjct: 29 IPAEEVGNIDELVREGYYGSRSDAIRDIIRRGAAQ 63 >UniRef50_D1A7S6 Putative transcriptional regulator, CopG family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A7S6_THECD Length = 80 Score = 38.2 bits (88), Expect = 0.079, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA 44 +R+ ++L L LD+ +R G +RS I + +R AL ++A Sbjct: 4 ERINVSLPSAQLRMLDAHVKRVGV-SRSTFIGESVRKALLEDA 45 >UniRef50_B2FQH5 Putative uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=B2FQH5_STRMK Length = 100 Score = 38.2 bits (88), Expect = 0.082, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 23/38 (60%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRS 38 M + I+L D L + +D + GY++ S+ +RD++R Sbjct: 21 MATMNISLTDPLKQFVDEEVREGGYSSTSDYVRDLIRQ 58 >UniRef50_C8W5M2 Putative uncharacterized protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W5M2_DESAS Length = 87 Score = 38.2 bits (88), Expect = 0.086, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 38/74 (51%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 ++++T++L + L D +R G+ NRS+ I + ++++ ++ G++ V S + Sbjct: 5 IEKITVSLRTETLRMADENHERFGFENRSDFINAAIHEYVSRDMLREFGSEIAEVYSKIQ 64 Query: 61 EHEKRDLASRIVST 74 E R+L + Sbjct: 65 HSEIRNLEEHLAKL 78 >UniRef50_B7DU49 Putative transcriptional regulator, CopG family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DU49_9BACL Length = 112 Score = 38.2 bits (88), Expect = 0.086, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 20/39 (51%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL 40 R+ ITL + L + ++ Y RS+A+ ++R L Sbjct: 6 PRIMITLPEKLFQEIEDFRFDYRYQTRSDAVLALIRIGL 44 >UniRef50_C5EM96 Predicted protein n=3 Tax=root RepID=C5EM96_9FIRM Length = 55 Score = 38.2 bits (88), Expect = 0.087, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHG 49 R TI +D+DLL+ +D + +RS A +++R + Q +Q Sbjct: 6 PRYTIIVDNDLLKQIDDFRFENRFPSRSAATLELIRLGIEQLRREQKE 53 >UniRef50_A1W5L9 Putative transcriptional regulators, CopG/Arc/MetJ family n=1 Tax=Acidovorax sp. JS42 RepID=A1W5L9_ACISJ Length = 83 Score = 38.2 bits (88), Expect = 0.091, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Query: 1 MQRVTIT--LDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQ 47 M R T++ L + + E +D+ Y N SE IRD++R ++A ++ Sbjct: 1 MSRQTMSFALPESMREYIDNRVAAGNYGNTSEYIRDLVRRDQEEQAKKR 49 >UniRef50_C5V4M6 Putative transcriptional regulator, CopG/Arc/MetJ family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4M6_9PROT Length = 95 Score = 37.8 bits (87), Expect = 0.098, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 19/37 (51%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRS 38 ++++I L +++ + Y + SE IRD LR Sbjct: 5 EKISIALPPEMVHIVRGAVATGEYASSSEVIRDALRD 41 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q727G4 Putative nickel-responsive regulator n=21 Tax=ce... 162 3e-39 UniRef50_Q01RT6 Putative nickel-responsive regulator n=2 Tax=Bac... 159 2e-38 UniRef50_A4G0H7 Putative nickel-responsive regulator n=11 Tax=Me... 158 4e-38 UniRef50_Q1MPD3 Putative nickel-responsive regulator n=1 Tax=Law... 156 2e-37 UniRef50_B8J1Q4 Putative nickel-responsive regulator n=3 Tax=Bac... 155 3e-37 UniRef50_Q1H065 Transcriptional regulator, CopG family n=4 Tax=P... 152 3e-36 UniRef50_A0B6X8 Putative nickel-responsive regulator n=4 Tax=Eur... 151 7e-36 UniRef50_B5YAK0 Putative nickel-responsive regulator n=2 Tax=Dic... 151 7e-36 UniRef50_C6XCC3 Transcriptional regulator NikR, CopG family n=1 ... 151 8e-36 UniRef50_B5R3Y5 Nickel-responsive regulator n=96 Tax=Enterobacte... 150 1e-35 UniRef50_Q8TQZ1 Putative nickel-responsive regulator 1 n=7 Tax=M... 149 2e-35 UniRef50_D2RI63 Transcriptional regulator NikR, CopG family n=3 ... 149 3e-35 UniRef50_O29515 Putative nickel-responsive regulator n=1 Tax=Arc... 149 3e-35 UniRef50_D1T1S2 Transcriptional regulator NikR, CopG family n=1 ... 148 4e-35 UniRef50_C7N0Q2 Predicted transcriptional regulator with CopG/Ar... 148 5e-35 UniRef50_B4S8H9 Putative transcriptional regulator, CopG family ... 148 6e-35 UniRef50_C6QSD1 Putative transcriptional regulator, CopG family ... 148 6e-35 UniRef50_Q217C6 Transcriptional regulator, CopG family n=3 Tax=R... 146 2e-34 UniRef50_B3QCC6 Putative nickel-responsive regulator n=5 Tax=Rho... 145 4e-34 UniRef50_Q6AS54 Putative nickel-responsive regulator n=3 Tax=Del... 145 4e-34 UniRef50_D0WH84 Toxin-antitoxin system protein n=1 Tax=Slackia e... 145 5e-34 UniRef50_A1KA89 Nickel responsive regulator protein n=8 Tax=Prot... 144 6e-34 UniRef50_C6P2L7 Putative transcriptional regulator, CopG family ... 144 6e-34 UniRef50_C5BCE8 Nickel-responsive regulator n=12 Tax=Proteobacte... 144 8e-34 UniRef50_UPI0001C418D8 nickel responsive transcriptional regulat... 144 8e-34 UniRef50_B3E7G1 Putative nickel-responsive regulator n=22 Tax=ce... 144 8e-34 UniRef50_B9JL06 Putative nickel-responsive regulator n=2 Tax=Pro... 144 1e-33 UniRef50_B1M0C3 Putative transcriptional regulator, CopG family ... 143 1e-33 UniRef50_O26834 Putative nickel-responsive regulator 2 n=5 Tax=M... 143 2e-33 UniRef50_UPI00016C3510 nickel responsive regulator n=1 Tax=Gemma... 143 2e-33 UniRef50_Q88HL5 Putative nickel-responsive regulator n=2 Tax=Pse... 142 3e-33 UniRef50_C7MLI8 Predicted transcriptional regulator with CopG/Ar... 142 4e-33 UniRef50_D1YXH4 Putative nickel-responsive regulator n=1 Tax=Met... 141 7e-33 UniRef50_Q2Y9N4 Transcriptional regulator, CopG family n=2 Tax=N... 141 1e-32 UniRef50_Q8PZ28 Putative nickel-responsive regulator 1 n=9 Tax=A... 140 1e-32 UniRef50_C1TP45 Predicted transcriptional regulator with CopG/Ar... 140 1e-32 UniRef50_A8FTW2 Nickel-responsive regulator n=3 Tax=Shewanella R... 139 3e-32 UniRef50_C9M5I2 Toxin-antitoxin system protein n=2 Tax=Synergist... 138 5e-32 UniRef50_Q578T1 Nickel-responsive regulator n=36 Tax=Brucella Re... 137 8e-32 UniRef50_C1SLF1 Predicted transcriptional regulator with CopG/Ar... 137 8e-32 UniRef50_Q0A737 Transcriptional regulator, CopG family n=1 Tax=A... 137 8e-32 UniRef50_B5IB41 NikR C terminal nickel binding domain family n=1... 137 1e-31 UniRef50_C3XHL4 Nickel responsive regulator n=3 Tax=Proteobacter... 135 3e-31 UniRef50_Q2IN94 Putative nickel-responsive regulator n=9 Tax=Del... 135 5e-31 UniRef50_Q8TV90 Putative nickel-responsive regulator n=1 Tax=Met... 133 2e-30 UniRef50_Q17Z13 Putative nickel-responsive regulator n=26 Tax=Ba... 132 3e-30 UniRef50_A7I1P3 Putative nickel-responsive regulator n=1 Tax=Cam... 131 1e-29 UniRef50_A6L9L6 Transcriptional regulator, putative nickel respo... 129 3e-29 UniRef50_Q2GAR7 Transcriptional regulator, CopG family n=2 Tax=A... 129 4e-29 UniRef50_B9XA69 Putative transcriptional regulator, CopG family ... 128 5e-29 UniRef50_Q18I31 Putative nickel-responsive regulator n=10 Tax=Ha... 128 5e-29 UniRef50_B5JR54 NikR C terminal nickel binding domain family n=1... 128 5e-29 UniRef50_C7JHT8 Transcriptional regulator CopG n=7 Tax=Acetobact... 127 7e-29 UniRef50_B8GWH5 Nickel-responsive regulator NikR n=2 Tax=Cauloba... 127 9e-29 UniRef50_Q18EC5 Transcription regulator; probably nickel respons... 127 1e-28 UniRef50_B4U5P2 Putative transcriptional regulator, CopG family ... 127 1e-28 UniRef50_Q31EP2 Transcriptional regulator, CopG family n=1 Tax=T... 125 4e-28 UniRef50_A3DKG0 Putative transcriptional regulator, CopG family ... 125 4e-28 UniRef50_C5SGL4 Putative transcriptional regulator, CopG family ... 123 1e-27 UniRef50_C8PGA0 Nickel-responsive regulator n=1 Tax=Campylobacte... 121 9e-27 UniRef50_Q5V2S1 Putative nickel-responsive regulator n=1 Tax=Hal... 121 1e-26 UniRef50_A3V7Y8 Transcriptional regulator, CopG family n=2 Tax=A... 118 4e-26 UniRef50_C7NP61 Transcriptional regulator NikR, CopG family n=1 ... 117 1e-25 UniRef50_C3N649 Putative nickel-responsive regulator n=10 Tax=Su... 116 2e-25 UniRef50_B9Z9H3 Putative transcriptional regulator, CopG family ... 116 3e-25 UniRef50_A1RZK4 Transcriptional regulator, CopG family n=1 Tax=T... 115 5e-25 UniRef50_A3M466 CopG n=14 Tax=Acinetobacter RepID=A3M466_ACIBT 115 5e-25 UniRef50_A2BJB5 Nickel responsive regulator n=1 Tax=Hyperthermus... 115 6e-25 UniRef50_A3K349 Transcriptionalregulator, CopG family protein n=... 114 1e-24 UniRef50_A1RQZ3 Transcriptional regulator, CopG family n=4 Tax=T... 112 3e-24 UniRef50_B1M926 Putative transcriptional regulator, CopG family ... 111 5e-24 UniRef50_B1L5X4 Putative transcriptional regulator, CopG family ... 111 6e-24 UniRef50_A3PPB2 Transcriptional regulator, CopG family n=3 Tax=R... 111 9e-24 UniRef50_Q58177 Uncharacterized transcriptional regulator MJ0767... 111 1e-23 UniRef50_D2RX96 Transcriptional regulator NikR, CopG family n=4 ... 109 2e-23 UniRef50_A6G2I6 Nickel responsive regulator n=1 Tax=Plesiocystis... 106 2e-22 UniRef50_A9GSQ5 Putative transcriptional regulator, CopG family ... 105 5e-22 UniRef50_Q3ITC6 Probable transcription regulator n=1 Tax=Natrono... 105 5e-22 UniRef50_B8D4E8 Putative transcriptional regulator, CopG family ... 104 9e-22 UniRef50_O26703 Putative nickel-responsive regulator 1 n=1 Tax=M... 103 2e-21 UniRef50_D2RV27 Transcriptional regulator NikR, CopG family n=1 ... 102 4e-21 UniRef50_D1JIB2 Putative nickel responsive regulator 1 n=2 Tax=e... 102 5e-21 UniRef50_C7NX71 Transcriptional regulator NikR, CopG family n=2 ... 101 8e-21 UniRef50_Q5V799 Transcriptional regulator n=3 Tax=Halobacteriace... 101 8e-21 UniRef50_Q2VNK9 Probable nickel responsive regulator n=1 Tax=Met... 100 2e-20 UniRef50_D2RG21 Putative transcriptional regulator, CopG family ... 99 4e-20 UniRef50_A2BJS7 Predicted transcriptional regulator, NikR n=1 Ta... 98 8e-20 UniRef50_A2BJM7 Putative nickel responsive regulator n=1 Tax=Hyp... 96 5e-19 UniRef50_A0RWH0 Transcriptional regulator n=3 Tax=Thaumarchaeota... 95 5e-19 UniRef50_A3DLG8 Transcriptional regulator, CopG family n=1 Tax=S... 95 6e-19 UniRef50_A2BMU8 Conserved crenarchaeal protein n=1 Tax=Hyperther... 89 3e-17 UniRef50_Q9Y8R3 Nickel responsive regulator n=1 Tax=Aeropyrum pe... 89 4e-17 UniRef50_B1L3A9 Putative transcriptional regulator, CopG family ... 88 1e-16 UniRef50_A4YI93 Transcriptional regulator, CopG family n=1 Tax=M... 87 2e-16 UniRef50_A1RWF4 Transcriptional regulator, CopG family n=1 Tax=T... 86 3e-16 UniRef50_Q60386 Uncharacterized transcriptional regulator MJ0080... 86 3e-16 UniRef50_Q9YEP4 Putative uncharacterized protein n=1 Tax=Aeropyr... 86 4e-16 UniRef50_Q7MS86 Putative uncharacterized protein n=1 Tax=Wolinel... 86 4e-16 UniRef50_A3MUX0 Transcriptional regulator, CopG family n=5 Tax=T... 80 3e-14 UniRef50_UPI0000D54CF8 hypothetical protein P700755_30935 n=1 Ta... 79 4e-14 UniRef50_B1L6V8 Putative transcriptional regulator, CopG family ... 60 3e-08 UniRef50_D2PD24 CopG domain protein DNA-binding domain protein n... 56 3e-07 UniRef50_Q8ZX60 Putative uncharacterized protein n=1 Tax=Pyrobac... 56 5e-07 UniRef50_Q2RPB0 Predicted transcriptional regulators containing ... 55 7e-07 UniRef50_A1RUT5 Transcriptional regulator, CopG family n=5 Tax=T... 55 8e-07 UniRef50_C0G2W8 CopG domain protein DNA-binding domain protein n... 55 1e-06 UniRef50_A2BJ34 Transcriptional regulator n=6 Tax=Thermoprotei R... 54 2e-06 UniRef50_Q5JJ81 Transcription regulator, CopG/RepA family n=1 Ta... 54 2e-06 UniRef50_A4YIW8 Putative transcriptional regulator, CopG/Arc/Met... 52 4e-06 UniRef50_Q9HHQ0 Vng6288c n=2 Tax=Halobacterium salinarum RepID=Q... 52 4e-06 UniRef50_Q9HHW8 Vng6193h n=3 Tax=Halobacterium salinarum RepID=Q... 52 5e-06 UniRef50_C6A437 Predicted transcriptional regulators containing ... 52 5e-06 UniRef50_A4J8J6 Transcriptional regulator, CopG family n=6 Tax=F... 52 7e-06 UniRef50_A1RWD2 Transcriptional regulator, CopG family n=1 Tax=T... 51 9e-06 UniRef50_Q4JBZ9 Conserved protein n=4 Tax=Sulfolobus RepID=Q4JBZ... 51 1e-05 UniRef50_C1V617 Transcriptional regulator, CopG family n=12 Tax=... 51 1e-05 UniRef50_Q7NGA1 Gll3272 protein n=1 Tax=Gloeobacter violaceus Re... 51 1e-05 UniRef50_Q6X3J4 NikR family transcriptional regulator protein-li... 51 2e-05 UniRef50_B9ZCU1 Putative transcriptional regulator, CopG family ... 50 2e-05 UniRef50_Q2RGI4 Transcriptional regulator, CopG family n=11 Tax=... 50 3e-05 UniRef50_D0U4G3 CopG/Arc/MetJ family n=1 Tax=uncultured SUP05 cl... 49 5e-05 UniRef50_C5A3Q2 Transcription regulator, copG/nikR family n=1 Ta... 47 1e-04 UniRef50_D2EEU4 Nucleotidyl transferase n=1 Tax=Candidatus Parva... 47 2e-04 Sequences not found previously or not previously below threshold: UniRef50_B8D3L5 Putative transcriptional regulator, CopG family ... 52 4e-06 UniRef50_B5ISV0 Ribbon-helix-helix protein, copG family n=1 Tax=... 48 1e-04 UniRef50_A1RUY5 Putative transcriptional regulators, CopG/Arc/Me... 46 4e-04 UniRef50_C0ZK25 Antitoxin EndoAI n=6 Tax=Firmicutes RepID=C0ZK25... 45 8e-04 UniRef50_Q3IM20 Homolog to transcription regulator n=4 Tax=Halob... 45 9e-04 UniRef50_D2RGK0 Putative transcriptional regulators, CopG/Arc/Me... 44 0.001 UniRef50_C0QKL9 Putative uncharacterized protein n=1 Tax=Desulfo... 44 0.001 UniRef50_Q2FN54 Transcriptional regulator, CopG family n=3 Tax=M... 44 0.002 UniRef50_B5Y6F5 Ribbon-helix-helix protein, CopG family n=1 Tax=... 44 0.002 UniRef50_D2PF81 CopG domain protein DNA-binding domain protein n... 44 0.002 UniRef50_A3DIW8 Putative transcriptional regulator, CopG family ... 44 0.002 UniRef50_B8G285 Putative transcriptional regulator, CopG family ... 44 0.002 UniRef50_C8SCV4 Putative transcriptional regulator, CopG/Arc/Met... 44 0.002 UniRef50_B5IWL3 Ribbon-helix-helix protein, copG family n=1 Tax=... 43 0.002 UniRef50_B1YCN5 Putative transcriptional regulator, CopG family ... 43 0.003 UniRef50_C3N733 Putative transcriptional regulator, CopG family ... 43 0.003 UniRef50_C7P3M0 Putative transcriptional regulator, CopG family ... 43 0.003 UniRef50_A8A8K7 Putative transcriptional regulator, CopG family ... 43 0.003 UniRef50_B0RYF6 Putative uncharacterized protein n=3 Tax=Xanthom... 43 0.003 UniRef50_D2PEH6 CopG domain protein DNA-binding domain protein n... 43 0.003 UniRef50_A2SRF9 Transcriptional regulator, CopG family n=2 Tax=M... 43 0.003 UniRef50_B7NEP0 Putative uncharacterized protein n=1 Tax=Escheri... 43 0.004 UniRef50_Q3JAU9 Helix-turn-helix protein, CopG family n=6 Tax=Ba... 43 0.004 UniRef50_A6VCR0 Putative addiction module antidote protein, fami... 42 0.004 UniRef50_B9JBH5 CopG/Arc/MetJ DNA-binding domain-containing tran... 42 0.006 UniRef50_Q7V1J7 Possible DnaJ domain n=1 Tax=Prochlorococcus mar... 42 0.006 UniRef50_B7KL55 Putative transcriptional regulator, CopG family ... 42 0.006 UniRef50_B0TE83 Helix-turn-helix domain protein, copg family, pu... 42 0.006 UniRef50_B2A572 Transcriptional regulator, CopG family n=3 Tax=C... 42 0.007 UniRef50_Q0YTZ6 CopG-like DNA-binding n=3 Tax=Chlorobium RepID=Q... 42 0.007 UniRef50_C7NQV1 Putative uncharacterized protein n=2 Tax=Halobac... 42 0.007 UniRef50_Q4KEL3 Putative uncharacterized protein n=3 Tax=Proteob... 42 0.008 UniRef50_B0SBS5 Transcriptional regulator n=2 Tax=Leptospira bif... 41 0.009 UniRef50_B2FQH5 Putative uncharacterized protein n=2 Tax=Stenotr... 41 0.009 UniRef50_A1JJS5 Putative uncharacterized protein n=4 Tax=Yersini... 41 0.010 UniRef50_C7NYG6 Putative uncharacterized protein n=1 Tax=Halomic... 41 0.012 UniRef50_C3JNM8 Hypothetical transcriptional regulator n=1 Tax=R... 41 0.013 UniRef50_Q9F560 YcfB protein n=9 Tax=Gammaproteobacteria RepID=Q... 41 0.013 UniRef50_D2C2Q9 Putative transcriptional regulator, CopG family ... 41 0.013 UniRef50_D2RT25 Putative transcriptional regulator, CopG family ... 41 0.013 UniRef50_Q3KFX5 Putative phage-related protein n=3 Tax=Pseudomon... 41 0.013 UniRef50_A8S5F4 Putative uncharacterized protein n=2 Tax=Clostri... 41 0.014 UniRef50_Q92ME4 Putative uncharacterized protein n=1 Tax=Sinorhi... 41 0.015 UniRef50_B1WV10 Putative uncharacterized protein n=3 Tax=Cyanoba... 41 0.015 UniRef50_Q18EA8 Putative uncharacterized protein n=1 Tax=Haloqua... 41 0.015 UniRef50_C7NV28 Putative transcriptional regulator, CopG family ... 41 0.016 UniRef50_B2AG39 Antitoxin of a toxin/antitoxin system n=20 Tax=r... 41 0.016 UniRef50_Q18DN8 Putative uncharacterized protein n=4 Tax=Halobac... 41 0.017 UniRef50_C6MCQ4 Putative addiction module antidote protein, CopG... 41 0.017 UniRef50_A2BM81 Putative uncharacterized protein n=1 Tax=Hyperth... 41 0.019 UniRef50_UPI0001C31469 putative transcriptional regulator, CopG ... 40 0.019 UniRef50_Q08W07 Putative uncharacterized protein n=1 Tax=Stigmat... 40 0.020 UniRef50_B3T8I8 Putative Ribbon-helix-helix protein, copG family... 40 0.021 UniRef50_A1T480 Putative transcriptional regulator, CopG family ... 40 0.021 UniRef50_C4XIU2 Putative uncharacterized protein n=1 Tax=Desulfo... 40 0.022 UniRef50_C5V4M6 Putative transcriptional regulator, CopG/Arc/Met... 40 0.023 UniRef50_B9DXM3 Putative uncharacterized protein n=3 Tax=Clostri... 40 0.023 UniRef50_B5IQ88 Ribbon-helix-helix protein, copG family n=1 Tax=... 40 0.024 UniRef50_Q7NP89 Gsl0168 protein n=1 Tax=Gloeobacter violaceus Re... 40 0.025 UniRef50_Q3JI77 KluA n=25 Tax=pseudomallei group RepID=Q3JI77_BURP1 40 0.025 UniRef50_C8SLQ5 Putative addiction module antidote protein, CopG... 40 0.025 UniRef50_D1TR69 Toxin-antitoxin system, antitoxin component, Hic... 40 0.025 UniRef50_A1W5L9 Putative transcriptional regulators, CopG/Arc/Me... 40 0.026 UniRef50_A5KTC8 Putative transcriptional regulator, CopG family ... 40 0.026 UniRef50_B1I6K0 Putative transcriptional regulator, CopG family ... 40 0.031 UniRef50_B5INF8 Putative uncharacterized protein n=1 Tax=Cyanobi... 39 0.033 UniRef50_UPI0001979092 hypothetical protein HcinC1_02204 n=1 Tax... 39 0.035 UniRef50_Q7NNQ4 Gsr0356 protein n=2 Tax=Bacteria RepID=Q7NNQ4_GLOVI 39 0.039 UniRef50_A5UC13 Putative uncharacterized protein n=13 Tax=Pasteu... 39 0.039 UniRef50_A9VW26 Putative uncharacterized protein n=2 Tax=Alphapr... 39 0.043 UniRef50_B4ET85 Phage protein n=27 Tax=Enterobacteriaceae RepID=... 39 0.044 UniRef50_D1A7S6 Putative transcriptional regulator, CopG family ... 39 0.044 UniRef50_Q59073 Uncharacterized protein MJ1679 n=1 Tax=Methanoca... 39 0.047 UniRef50_Q9V2N5 Putative uncharacterized protein n=3 Tax=Thermoc... 39 0.049 UniRef50_Q18GU1 Putative uncharacterized protein n=6 Tax=Halobac... 39 0.054 UniRef50_B9TH19 Putative uncharacterized protein (Fragment) n=1 ... 39 0.057 UniRef50_B1LWB5 Putative transcriptional regulators, CopG/Arc/Me... 39 0.063 UniRef50_A3UKJ6 Putative uncharacterized protein n=1 Tax=Oceanic... 39 0.064 UniRef50_A2BLC9 Putative uncharacterized protein n=1 Tax=Hyperth... 39 0.064 UniRef50_Q573G1 Putative zinc finger protein ORF104b n=1 Tax=Aci... 39 0.065 UniRef50_O28681 Putative uncharacterized protein n=1 Tax=Archaeo... 39 0.066 UniRef50_O19199 Uncharacterized protein AF_0569 n=1 Tax=Archaeog... 39 0.070 UniRef50_Q5JG37 Putative uncharacterized protein n=1 Tax=Thermoc... 38 0.073 UniRef50_D2JDJ3 Putative uncharacterized protein n=2 Tax=Staphyl... 38 0.073 UniRef50_A1RZW3 Putative transcriptional regulator, CopG family ... 38 0.078 UniRef50_A9CJV3 Putative uncharacterized protein n=4 Tax=Rhizobi... 38 0.080 UniRef50_A1SKR3 CopG domain protein DNA-binding domain protein n... 38 0.082 UniRef50_Q5WRX4 Putative uncharacterized protein n=1 Tax=Legione... 38 0.088 UniRef50_C6B5G6 Putative transcriptional regulator, CopG/Arc/Met... 38 0.090 UniRef50_A4X0A8 Putative uncharacterized protein n=1 Tax=Rhodoba... 38 0.090 UniRef50_C5SJ89 Putative addiction module antidote protein, CopG... 38 0.092 UniRef50_Q98J17 Mlr2150 protein n=5 Tax=Rhizobiales RepID=Q98J17... 38 0.096 UniRef50_Q3J2T1 Possible transcriptional regulator, CopG family ... 38 0.099 >UniRef50_Q727G4 Putative nickel-responsive regulator n=21 Tax=cellular organisms RepID=NIKR_DESVH Length = 139 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 52/131 (39%), Positives = 78/131 (59%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R ++LD +LL+ D L R Y RSEAIRD++R+ L Q+ + + L+ VY+H Sbjct: 6 RFGVSLDSELLDKFDVLCDERCYQTRSEAIRDLIRNTLVQQEWEDTDREIAGTLTLVYDH 65 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVR 122 K DLA R+ QH HD+ + +LHVH++H +CLE+ VLKG V++ A +I+ +GV+ Sbjct: 66 HKSDLAQRLTEIQHDVHDIIITSLHVHLDHYNCLEVLVLKGPGQQVRNLAQRLISTKGVK 125 Query: 123 HGHLQCLPKED 133 HG L Sbjct: 126 HGKLSLTTTGQ 136 >UniRef50_Q01RT6 Putative nickel-responsive regulator n=2 Tax=Bacteria RepID=NIKR_SOLUE Length = 139 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 51/129 (39%), Positives = 81/129 (62%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R+ + +D DLL+ DSL +RGY NRSEA RD++R L ++ + +Q ++ VY Sbjct: 4 LSRIGVAIDSDLLDKFDSLIGQRGYTNRSEAFRDLIRDELVEKTWESPESQVVGTVTLVY 63 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H R L ++ QH H ++TLHVH++HD+CLE+ V++G DV+ AD +I+ +G Sbjct: 64 DHHVRLLNEKLTGIQHDFHHSILSTLHVHLDHDNCLEVLVVRGRSADVRKVADVLISTKG 123 Query: 121 VRHGHLQCL 129 V+HG L Sbjct: 124 VKHGRLTIT 132 >UniRef50_A4G0H7 Putative nickel-responsive regulator n=11 Tax=Methanococcales RepID=NIKR_METM5 Length = 141 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 43/130 (33%), Positives = 76/130 (58%), Gaps = 1/130 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEAT-QQHGTQGFAVLSYV 59 M R++I+L +LL D + + RGY +RSEAIRD +R L + +S + Sbjct: 4 MDRISISLPTNLLAEFDEIIEERGYASRSEAIRDSIRDYLIKHKWIHSLEGDRAGTISII 63 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H D+ ++ + QH + L VAT+H+H++HD C+E+ ++KGD +++ D + +Q+ Sbjct: 64 YDHHSTDVMEKLTNIQHDYEKLIVATIHMHLDHDHCMEVVLVKGDASEIKELTDKLTSQK 123 Query: 120 GVRHGHLQCL 129 GV+ L + Sbjct: 124 GVKQVKLTVM 133 >UniRef50_Q1MPD3 Putative nickel-responsive regulator n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=NIKR_LAWIP Length = 139 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 54/132 (40%), Positives = 86/132 (65%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 R ++LD+DLL D L R+GY +RSEA+RD++R ALA++ Q + VLS VY+ Sbjct: 5 VRFGVSLDEDLLNKFDKLCDRQGYPSRSEALRDMIRQALAKDILQSKDSNAAGVLSLVYD 64 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 H R+L+ +++ QH +D +ATLH+H++ +CLE+ ++KG+ G +Q AD + + RGV Sbjct: 65 HHTRELSRKLIERQHEMYDSIIATLHIHLDRYNCLEVLIIKGNGGKIQQLADMLCSIRGV 124 Query: 122 RHGHLQCLPKED 133 + G LP E+ Sbjct: 125 KLGAFSFLPVEE 136 >UniRef50_B8J1Q4 Putative nickel-responsive regulator n=3 Tax=Bacteria RepID=NIKR_DESDA Length = 138 Score = 155 bits (393), Expect = 3e-37, Method: Composition-based stats. Identities = 60/123 (48%), Positives = 81/123 (65%), Gaps = 1/123 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R ++LD DLLE D L +R+ Y NRSEAIRD++R AL +E G L+ VY Sbjct: 4 LARFGVSLDQDLLEPFDELCRRKSYPNRSEAIRDLIRKALVEEKWNS-DAHGAGTLTLVY 62 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H K DL+ R+V QH HDL V TLHVH++H +CLE+ VLKG+ ++ AD +IA RG Sbjct: 63 DHHKNDLSRRLVQIQHDDHDLIVTTLHVHLDHYNCLEVLVLKGEPKRMRALADKLIACRG 122 Query: 121 VRH 123 V+H Sbjct: 123 VKH 125 >UniRef50_Q1H065 Transcriptional regulator, CopG family n=4 Tax=Proteobacteria RepID=Q1H065_METFK Length = 156 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 44/130 (33%), Positives = 75/130 (57%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R++I+L D+L LD + RG+ +RS+AI D+LR LA+ ++ ++ +Y Sbjct: 11 VNRISISLPDELHAELDIMVAERGFESRSQAINDMLRQYLAEHQREKGNEVMVGTITLLY 70 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + R L I Q+ H D +++LHVH+ + +E+ +++G DVQ AD++IA RG Sbjct: 71 NNATRGLQKTIADLQYQHVDEVISSLHVHLTDNQTMEVILVQGPAQDVQKIADELIALRG 130 Query: 121 VRHGHLQCLP 130 V G LQ + Sbjct: 131 VTTGRLQLMA 140 >UniRef50_A0B6X8 Putative nickel-responsive regulator n=4 Tax=Euryarchaeota RepID=NIKR_METTP Length = 140 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 41/132 (31%), Positives = 74/132 (56%), Gaps = 1/132 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH-GTQGFAVLSYV 59 + R+ ++L + LL D + +RGY++RSE IRD +R+ + + V++ V Sbjct: 5 LMRIGVSLPEKLLSRFDEIISQRGYSSRSEGIRDAIRNYIIHYEWMSDVEGERVGVITIV 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y H +R L + QH + ++LHVH++ D+CLE+ +L+G+ DV+ A+ ++A + Sbjct: 65 YSHHQRGLVDSLTDIQHEFGSIINSSLHVHLDKDNCLEVVILRGEGKDVRRAAERMMALK 124 Query: 120 GVRHGHLQCLPK 131 GV+H L Sbjct: 125 GVKHVKLTTTSV 136 >UniRef50_B5YAK0 Putative nickel-responsive regulator n=2 Tax=Dictyoglomus RepID=NIKR_DICT6 Length = 135 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 39/131 (29%), Positives = 82/131 (62%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R +++++DLLE D + + +GYN+RSEAIRD++R + +E + +S +Y Sbjct: 4 IVRFGVSVEEDLLENFDKIIENKGYNSRSEAIRDLMRDYIIKEKWNIKSEKVAGSISLIY 63 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 EH+ L+ ++ QHH+HD+ ++TLHVH++ +C+E+ +++G + ++ +++ + + Sbjct: 64 EHDVYGLSEKLTDIQHHYHDVIISTLHVHLDEKNCMEVILVRGKVEKIKKLYNEISSLKW 123 Query: 121 VRHGHLQCLPK 131 VRH ++ Sbjct: 124 VRHTNISITDI 134 >UniRef50_C6XCC3 Transcriptional regulator NikR, CopG family n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCC3_METSD Length = 157 Score = 151 bits (381), Expect = 8e-36, Method: Composition-based stats. Identities = 43/129 (33%), Positives = 75/129 (58%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R++I+L D+L LDS+ RG+ +RS+AI D+LR LA+ ++ ++ +Y Sbjct: 10 VNRISISLPDELHAELDSMVIERGFESRSQAINDMLRQHLAEHKREKGNEVMVGTITILY 69 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + R L I Q+ H D +++LHVH+ + +E+ +++G VQ A+++IA RG Sbjct: 70 NNGTRGLQKTIADLQYQHLDEVISSLHVHLADNQTMEVILVQGPALTVQAVANEIIALRG 129 Query: 121 VRHGHLQCL 129 V G LQ + Sbjct: 130 VITGKLQLM 138 >UniRef50_B5R3Y5 Nickel-responsive regulator n=96 Tax=Enterobacteriaceae RepID=NIKR_SALEP Length = 133 Score = 150 bits (379), Expect = 1e-35, Method: Composition-based stats. Identities = 131/133 (98%), Positives = 132/133 (99%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILR ALAQEATQ+HGTQGFAVLSYVY Sbjct: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRGALAQEATQEHGTQGFAVLSYVY 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG Sbjct: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 Query: 121 VRHGHLQCLPKED 133 VRHGHLQCLPKED Sbjct: 121 VRHGHLQCLPKED 133 >UniRef50_Q8TQZ1 Putative nickel-responsive regulator 1 n=7 Tax=Methanomicrobia RepID=NIKR1_METAC Length = 140 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 76/134 (56%), Gaps = 1/134 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH-GTQGFAVLSYV 59 + R+ I+L D LL D + +RGY++RSE IRD +RS ++ +++V Sbjct: 5 LMRIGISLPDILLGEFDEIIGKRGYSSRSEGIRDAIRSYISYYEWMNDIKGHRVGTIAFV 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H KR L++ + QHH+ L +++HVH++H +C E+ VL GD ++ ++ ++ + Sbjct: 65 YDHTKRGLSNSLTDIQHHYSHLIKSSIHVHLDHKECFEVVVLNGDGKEIAELSETMMVLK 124 Query: 120 GVRHGHLQCLPKED 133 GV+ L + + Sbjct: 125 GVKFSKLTTVASNE 138 >UniRef50_D2RI63 Transcriptional regulator NikR, CopG family n=3 Tax=Euryarchaeota RepID=D2RI63_ARCPR Length = 137 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 1/129 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEAT-QQHGTQGFAVLSYV 59 + R+ ++L +LLE DS+ + RGY++RSEAIRD +R+ + + ++ + V+ + Sbjct: 5 ITRIGVSLPKNLLEEFDSIIKTRGYSSRSEAIRDAIRNYIMEYKWLEREEGEIVGVVYII 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H + ++ I+ QH D+ T+H+H++ D CLEI ++KGDM V+ D + Sbjct: 65 YDHTVKGVSDAIIDLQHEFLDVITTTMHIHLSKDYCLEIILVKGDMKKVKALVDKATTIK 124 Query: 120 GVRHGHLQC 128 GV + L Sbjct: 125 GVMNVKLVT 133 >UniRef50_O29515 Putative nickel-responsive regulator n=1 Tax=Archaeoglobus fulgidus RepID=NIKR_ARCFU Length = 138 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 39/127 (30%), Positives = 74/127 (58%), Gaps = 1/127 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEAT-QQHGTQGFAVLSYV 59 + R+ ++L +LL+ D + RGY++RSEAIRD +R+ + + + + VL + Sbjct: 5 ITRIGVSLPKNLLDEFDRIISTRGYSSRSEAIRDAIRTYITEYRWLESEKGEIVGVLVVL 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H + ++ ++ QH H++ ++ H+H+N D CLE+ ++KG M ++ D + A R Sbjct: 65 YDHHVKGVSDLLIDLQHDFHEIITSSTHIHLNEDQCLEMILVKGKMERIKVLVDKISAAR 124 Query: 120 GVRHGHL 126 GV + L Sbjct: 125 GVMNVKL 131 >UniRef50_D1T1S2 Transcriptional regulator NikR, CopG family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T1S2_9BURK Length = 163 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 60/142 (42%), Positives = 89/142 (62%), Gaps = 10/142 (7%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALA----------QEATQQHGT 50 MQR TI+LDD+L D+ R+GY NRSEA+RD++RS L + G+ Sbjct: 1 MQRFTISLDDELALQFDAFIARKGYGNRSEAVRDLIRSRLGCDSLGEAASGARRHGRDGS 60 Query: 51 QGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQH 110 A +SYVY+H ++ + SR++ QH HHDL + +LH H++HD+CLE VL+G V+ Sbjct: 61 WCVASVSYVYDHHEQTVTSRVLDLQHDHHDLVITSLHTHLDHDNCLETVVLRGPTAAVRE 120 Query: 111 FADDVIAQRGVRHGHLQCLPKE 132 A+ ++A RGVRHG++ +P E Sbjct: 121 CAERLVALRGVRHGNVHLVPLE 142 >UniRef50_C7N0Q2 Predicted transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N0Q2_SLAHD Length = 172 Score = 148 bits (374), Expect = 5e-35, Method: Composition-based stats. Identities = 41/132 (31%), Positives = 78/132 (59%), Gaps = 1/132 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYN-NRSEAIRDILRSALAQEATQQHGTQGFAVLSYV 59 + R ++ + +DLL D L RG NRSE +RD++R ALA+++ + G + L+ V Sbjct: 5 LMRFSVAMPEDLLMDFDKLVATRGLAKNRSEVVRDLVRDALAEQSCDRPGEEVMGTLTIV 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 + H D+ ++ S QH + + V ++HVH++H+ C+E+ +L+G+ V+ ++ ++ + Sbjct: 65 FNHHTNDVREKLDSIQHDYLEQIVTSVHVHMDHELCMEVIILRGENDVVRTISNRIVGTK 124 Query: 120 GVRHGHLQCLPK 131 GV HG+L Sbjct: 125 GVLHGNLSITST 136 >UniRef50_B4S8H9 Putative transcriptional regulator, CopG family n=2 Tax=Chlorobiaceae RepID=B4S8H9_PROA2 Length = 147 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 51/127 (40%), Positives = 76/127 (59%), Gaps = 1/127 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M+R ++L+D+LLE LDSL Q + NRS+AIR ++R E + + L VY Sbjct: 1 MKRFGVSLEDELLEQLDSLVQHHRFPNRSQAIRYLIRKHNRDEYWESNEAVC-GCLVLVY 59 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H + DL R+ S QH H+L + + HVH++H++CLE LKG D+ AD +IA +G Sbjct: 60 DHHRSDLQKRLTSIQHEFHNLVLCSQHVHLDHNNCLETITLKGKAIDIGELADRLIALKG 119 Query: 121 VRHGHLQ 127 + HG L Sbjct: 120 IVHGELV 126 >UniRef50_C6QSD1 Putative transcriptional regulator, CopG family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QSD1_9BACI Length = 146 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 40/133 (30%), Positives = 69/133 (51%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R ++ LLE D + +GY NRSEAIRD+ R A+ + + V+ VY Sbjct: 7 LIRFGVSFPASLLEQFDQYIKEQGYTNRSEAIRDLARKAIIEPSRLNPDDNVAGVIIMVY 66 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 H DL + + QH H ++T+H+H+NH CLE+ V++G + +++ + Q+G Sbjct: 67 NHHISDLPIFLKNVQHEFHHDIISTMHIHLNHTQCLEVVVVRGKLVNLRSLHQQIQVQKG 126 Query: 121 VRHGHLQCLPKED 133 V + + +D Sbjct: 127 VFYAEMSVTYLDD 139 >UniRef50_Q217C6 Transcriptional regulator, CopG family n=3 Tax=Rhizobiales RepID=Q217C6_RHOPB Length = 167 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 63/126 (50%), Positives = 88/126 (69%), Gaps = 1/126 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ-GFAVLSYV 59 M+RVT++LDDDLLE D +R+GY NRSEA+RD+LR L ++ ++ A LSYV Sbjct: 1 MERVTVSLDDDLLEQFDGFIRRKGYMNRSEAVRDVLRDRLQEDRLSENNAPLCVACLSYV 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y H +R+LA RI QH HHDL +T+HVH++HD CLE+++++G V+ AD ++AQ Sbjct: 61 YNHHERELARRIAEIQHAHHDLIRSTMHVHLDHDSCLEVSMMEGPTIAVRELADALMAQT 120 Query: 120 GVRHGH 125 GVRHG Sbjct: 121 GVRHGR 126 >UniRef50_B3QCC6 Putative nickel-responsive regulator n=5 Tax=Rhodopseudomonas palustris RepID=NIKR_RHOPT Length = 147 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 66/129 (51%), Positives = 89/129 (68%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M RVTITLDDDL+E LD++ RGY NRSEAIRD+ R + Q A + + Y Y Sbjct: 1 MHRVTITLDDDLMEKLDAIIAARGYQNRSEAIRDLARIGIQQTAAETTSGHCVGAMVYTY 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H KRDL ++ + HHHHDLS AT+HVH++HD CLE+ +L G+ ++QHFAD + A+RG Sbjct: 61 DHSKRDLPRKLTQSFHHHHDLSRATMHVHLDHDQCLEVTILDGNASELQHFADHIFAERG 120 Query: 121 VRHGHLQCL 129 VR+G L + Sbjct: 121 VRYGRLVTI 129 >UniRef50_Q6AS54 Putative nickel-responsive regulator n=3 Tax=Deltaproteobacteria RepID=NIKR_DESPS Length = 136 Score = 145 bits (366), Expect = 4e-34, Method: Composition-based stats. Identities = 50/128 (39%), Positives = 76/128 (59%), Gaps = 1/128 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 ++R +I+LDD+LLE D + YNNRSEAIRD++R + + V+S +Y Sbjct: 2 LKRFSISLDDNLLEIFDQHIAEKAYNNRSEAIRDLIRKNFVLKEWE-EDRDVMGVISLIY 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H + L ++ QH H V+T HVH++HD+CLE+ ++KG GDV AD + A +G Sbjct: 61 DHHQSQLQKKVTDLQHDFHHHIVSTTHVHMDHDNCLEVIIVKGRAGDVIELADGLAALKG 120 Query: 121 VRHGHLQC 128 VR +L Sbjct: 121 VRDSNLAM 128 >UniRef50_D0WH84 Toxin-antitoxin system protein n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WH84_9ACTN Length = 211 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 77/132 (58%), Gaps = 1/132 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYN-NRSEAIRDILRSALAQEATQQHGTQGFAVLSYV 59 + R ++ + +DLL D L RG NRSE +RD++R ALA +A+ + G + L+ V Sbjct: 5 LMRFSVAMPEDLLVEFDKLVATRGLAKNRSEVVRDLVREALAGQASGEPGEEVMGTLTIV 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 + H D+ ++ S QH D + ++HVHI+H+ C+E+ +L+G+ +Q ++ ++ + Sbjct: 65 FNHHASDVREKLDSIQHDCLDQIITSVHVHIDHELCMEVVILRGETDVIQAISNLILGTK 124 Query: 120 GVRHGHLQCLPK 131 GV HG+L Sbjct: 125 GVLHGNLAITAT 136 >UniRef50_A1KA89 Nickel responsive regulator protein n=8 Tax=Proteobacteria RepID=A1KA89_AZOSB Length = 160 Score = 144 bits (365), Expect = 6e-34, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 86/133 (64%), Gaps = 1/133 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGT-QGFAVLSYV 59 M+R TI+L+D+L D+L RGY +RSEA+RD+LR L ++ A LSYV Sbjct: 1 MERFTISLEDELARDFDALIAERGYASRSEAVRDMLRRELEAARQRRGDGGHCIASLSYV 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 + H +RDL R+ QH HHDL+V+TLH H++HD+C+E +L+G V+ FAD ++AQ Sbjct: 61 FNHHERDLGERLTGIQHDHHDLTVSTLHAHLDHDNCIESTILRGPTEAVRRFADSIMAQS 120 Query: 120 GVRHGHLQCLPKE 132 GVRHG L + + Sbjct: 121 GVRHGQLNLISVD 133 >UniRef50_C6P2L7 Putative transcriptional regulator, CopG family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2L7_9PROT Length = 169 Score = 144 bits (365), Expect = 6e-34, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 74/130 (56%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + RV+I+L LL LDS+ + RGY +RS+AI +++ L++ ++ +Y Sbjct: 13 VSRVSISLPPPLLNELDSMVESRGYESRSQAIGEMVNYQLSEHKRTLGNEVMVGTITLLY 72 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + RDL ++ Q+ H + +++LHVH+ D +E+ +++G ++Q A+++I RG Sbjct: 73 DRLTRDLQKKLADMQYKHINEVISSLHVHLTEDQMMEVILVQGPAAELQAVANEMITLRG 132 Query: 121 VRHGHLQCLP 130 + G LQ L Sbjct: 133 IITGRLQLLA 142 >UniRef50_C5BCE8 Nickel-responsive regulator n=12 Tax=Proteobacteria RepID=NIKR_EDWI9 Length = 145 Score = 144 bits (364), Expect = 8e-34, Method: Composition-based stats. Identities = 66/134 (49%), Positives = 92/134 (68%), Gaps = 1/134 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQ-QHGTQGFAVLSYV 59 MQRVT++LDDDL+ +D++ + Y NRSE IRD+ R+ L A A L YV Sbjct: 1 MQRVTLSLDDDLMAEIDAIIRAGNYQNRSEVIRDLARAGLQSMAQAPSPSACCVAALFYV 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+HE R+L+ R+ T H HHDLS+A+LHVH++H CLE+++LKG G+V FA+ VIA+R Sbjct: 61 YDHESRELSKRLTRTFHDHHDLSLASLHVHLDHGSCLEVSLLKGAGGEVTRFAERVIAER 120 Query: 120 GVRHGHLQCLPKED 133 GVRHG L +P ++ Sbjct: 121 GVRHGKLVVVPGDE 134 >UniRef50_UPI0001C418D8 nickel responsive transcriptional regulator NikR n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C418D8 Length = 164 Score = 144 bits (364), Expect = 8e-34, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 1/133 (0%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH-GTQGFAVLSYVY 60 R++++L LL D + + RGY +RS+ IRD L + + V++ +Y Sbjct: 1 MRISMSLPKKLLAEFDEVLKDRGYQSRSKGIRDALSDYILRYPWMNEMEGNRVGVITVIY 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H + + QH + A++H+H+ H C+E+ V+ G++ ++ A+ ++ +G Sbjct: 61 DHHFTGVMENLADIQHDCMEEINASMHIHMTHKYCMEVIVVNGNVTHIRELAERMMRLKG 120 Query: 121 VRHGHLQCLPKED 133 V H L + Sbjct: 121 VEHVKLTSTANGE 133 >UniRef50_B3E7G1 Putative nickel-responsive regulator n=22 Tax=cellular organisms RepID=NIKR_GEOLS Length = 139 Score = 144 bits (364), Expect = 8e-34, Method: Composition-based stats. Identities = 50/130 (38%), Positives = 80/130 (61%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R I++D DLL++ D L R+GY NRSEAIRD++R+ + +E + ++ VY Sbjct: 4 ITRFGISIDSDLLDSFDRLITRKGYQNRSEAIRDLIRATIVEEKMDAGHEEMVGTVTMVY 63 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 H RDLA ++ QH HH ++ LHVH++ +CLE+ VLKG +++ AD+++ +G Sbjct: 64 NHHVRDLADKLTEHQHQHHHQVISALHVHLDAHNCLEVLVLKGSSAEIKQIADELLGVKG 123 Query: 121 VRHGHLQCLP 130 V+HG L Sbjct: 124 VKHGKLFLTS 133 >UniRef50_B9JL06 Putative nickel-responsive regulator n=2 Tax=Proteobacteria RepID=NIKR_AGRRK Length = 145 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 76/133 (57%), Positives = 107/133 (80%), Gaps = 1/133 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALA-QEATQQHGTQGFAVLSYV 59 MQR+TIT+DDDLLET+D +S++RGY +RSE +RD++R A+ ++A T+ +A L+YV Sbjct: 1 MQRITITIDDDLLETIDKISEQRGYASRSETLRDLVRDAVTREQAAVDSETKCYATLTYV 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 YEHE RDL+ R+ +TQHHHHDLSV+TLHVH++ DCLE++VLKG +G+++ FAD V+ QR Sbjct: 61 YEHETRDLSRRLTTTQHHHHDLSVSTLHVHVDGHDCLEVSVLKGTVGEIKSFADSVVTQR 120 Query: 120 GVRHGHLQCLPKE 132 GVR G+L +P E Sbjct: 121 GVRFGNLHLIPSE 133 >UniRef50_B1M0C3 Putative transcriptional regulator, CopG family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M0C3_METRJ Length = 147 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 71/135 (52%), Positives = 92/135 (68%), Gaps = 3/135 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ--GFAVLSY 58 MQR+TIT+DD LL +D L RRGY +RSEA+RDI+R ALA + G + LSY Sbjct: 1 MQRITITIDDALLTAVDDLCARRGYGSRSEAVRDIVRDALAPARAAETGGSGACYGALSY 60 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 VY H RDLA R+ H H +S+A+LHVH+NHD CLE+AVL+G +Q +AD V+ Q Sbjct: 61 VYSHGTRDLARRLTGEGHEH-GVSIASLHVHLNHDACLEVAVLRGPPARMQSYADAVVTQ 119 Query: 119 RGVRHGHLQCLPKED 133 RGVR+GHL +P+ D Sbjct: 120 RGVRYGHLHLIPEGD 134 >UniRef50_O26834 Putative nickel-responsive regulator 2 n=5 Tax=Methanobacteriaceae RepID=NIKR2_METTH Length = 140 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 1/134 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH-GTQGFAVLSYV 59 M R++++L LL D + + RGY +RS+ IRD L+ + + + +++ + Sbjct: 1 MMRISMSLPKKLLNEFDEVLRDRGYQSRSKGIRDALKDYIVRYQWMNEMEGERIGIIAVI 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H + + QH + + A +HVH+ CLE+ V+KGD+ ++ + ++ + Sbjct: 61 YDHHYTGVMEDLADIQHDYREYINAVMHVHMTERHCLEVIVVKGDVAKIRELTEKMMRLK 120 Query: 120 GVRHGHLQCLPKED 133 GV H L E Sbjct: 121 GVEHVRLTSTSTEQ 134 >UniRef50_UPI00016C3510 nickel responsive regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3510 Length = 149 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 71/128 (55%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R +++L+ DLL D + + RSEAIR +LR L ++A A L+ VY Sbjct: 4 LTRFSVSLEADLLGAFDKYVRDGAFATRSEAIRQLLRQTLTRDAFDADDAPVTATLTIVY 63 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H + L +++ QH H + +A++HVH++HD C+E+ VL+G +++ A + +G Sbjct: 64 DHHRPHLVEKLLDVQHDHANRVIASMHVHLDHDRCMEVIVLRGPGEALRNLAAAIRGLKG 123 Query: 121 VRHGHLQC 128 V G L Sbjct: 124 VHTGTLAL 131 >UniRef50_Q88HL5 Putative nickel-responsive regulator n=2 Tax=Pseudomonas putida RepID=NIKR_PSEPK Length = 138 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 56/130 (43%), Positives = 86/130 (66%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 MQR+TITLD++LL+ +D +GY RSEAIRD+LR+ + + AV+SY+Y Sbjct: 1 MQRITITLDEELLDVIDRRVATQGYQGRSEAIRDLLRAGMRESEALPDDAACVAVVSYLY 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H R+L R+ T H HHDL+ +TLHVH++ CLE++VL+G+ G + + ++ +RG Sbjct: 61 DHSTRELPRRLNQTLHAHHDLTRSTLHVHLDAGHCLEVSVLQGESGRIGELSRQLMVERG 120 Query: 121 VRHGHLQCLP 130 V HG +Q +P Sbjct: 121 VEHGQVQVIP 130 >UniRef50_C7MLI8 Predicted transcriptional regulator with CopG/Arc/MetJ DNA-binding domain protein and metal-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MLI8_CRYCD Length = 140 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 44/130 (33%), Positives = 74/130 (56%), Gaps = 1/130 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYN-NRSEAIRDILRSALAQEATQQHGTQGFAVLSYV 59 + R ++ + +DLL D L RRG + NRSE IRD++R AL + G + L+ V Sbjct: 5 LMRFSVAMPEDLLIEFDQLVARRGLSKNRSEVIRDLVREALVEAECATPGCEVMGTLTIV 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 + H DL R+ QHH+ + +++ HVH++ CLE+ +++G+ G VQ +D ++ + Sbjct: 65 FNHHANDLRDRLDDIQHHYVENIISSTHVHLDEHSCLEVIIMRGETGLVQGISDMILGTK 124 Query: 120 GVRHGHLQCL 129 GV+ G L Sbjct: 125 GVKTGRLVLT 134 >UniRef50_D1YXH4 Putative nickel-responsive regulator n=1 Tax=Methanocella paludicola SANAE RepID=D1YXH4_METPS Length = 139 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 75/133 (56%), Gaps = 1/133 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH-GTQGFAVLSYV 59 + R+ I++ L+ D + +RGY++RSE IRD +R + E ++S + Sbjct: 4 LARIGISVPGRLMGRFDEVIAQRGYSSRSEGIRDAIRDYIQYEKWMSKVRGDRIGIISIL 63 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y +KR L S ++ +H + L + T+H +++ D+C+++ +++G+ G ++ F + ++A + Sbjct: 64 YNQDKRKLVSSLMQVRHDNSGLILTTIHKYLDKDNCMDVIIVRGEGGSIRAFTEKLMANK 123 Query: 120 GVRHGHLQCLPKE 132 V+H L + E Sbjct: 124 CVKHVKLTTILPE 136 >UniRef50_Q2Y9N4 Transcriptional regulator, CopG family n=2 Tax=Nitrosomonadaceae RepID=Q2Y9N4_NITMU Length = 153 Score = 141 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 93/133 (69%), Gaps = 1/133 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL-AQEATQQHGTQGFAVLSYV 59 M+R+TI+L+D L + +S + GY NRSEA+RD++R+ + +Q A LSY+ Sbjct: 1 MERLTISLNDQLAKQFESAMHKLGYFNRSEAVRDLIRNMIETARQEEQVDGYCIATLSYI 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y H +R+LA + STQH+HH+L+++T+HVH++HD+CLE+ +L+G + V++FA+ V A Sbjct: 61 YNHHERELARCVTSTQHNHHNLTLSTMHVHMDHDNCLEVTILRGTIKSVKNFANLVTATP 120 Query: 120 GVRHGHLQCLPKE 132 GVRHG L LP E Sbjct: 121 GVRHGKLHLLPIE 133 >UniRef50_Q8PZ28 Putative nickel-responsive regulator 1 n=9 Tax=Archaea RepID=NIKR1_METMA Length = 146 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 39/134 (29%), Positives = 77/134 (57%), Gaps = 1/134 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH-GTQGFAVLSYV 59 + R+ ++L D LL D + ++RGY++RSEAIRD +RS ++ + + + Sbjct: 5 LMRIGVSLPDTLLGKFDEIIEKRGYSSRSEAIRDSIRSYISYNEWMGNIKGHHVGTIVII 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H +R L++ + QHH+ L +++H++ + +DC EI VL+G+ ++ A+ ++A + Sbjct: 65 YDHTQRGLSNVLTDIQHHYSHLIRSSIHIYPDREDCFEIVVLEGEGKEITELAEAIMALK 124 Query: 120 GVRHGHLQCLPKED 133 GV+ L + Sbjct: 125 GVKLSKLITTESNE 138 >UniRef50_C1TP45 Predicted transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TP45_9BACT Length = 137 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 62/121 (51%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R + + + LL D +R+G NRSEAIR ++R +++ + + ++ Y Sbjct: 6 LVRFGVAVPEGLLRDFDRQIERKGVPNRSEAIRQLIRDSISDTRWTEGKGTVYGSVTISY 65 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 H R+ S + QH D+ + T HVH +HD C+E+ ++KG V+ +++ R Sbjct: 66 NHHTREACSTLTDIQHDFGDVIICTSHVHADHDHCVEVIMVKGQASRVKALIEELSGVRA 125 Query: 121 V 121 + Sbjct: 126 I 126 >UniRef50_A8FTW2 Nickel-responsive regulator n=3 Tax=Shewanella RepID=A8FTW2_SHESH Length = 136 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 69/125 (55%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEH 62 R T++L + L + ++ Q RGY +RSE IRD+ R + + VL+ V++H Sbjct: 7 RFTVSLPESLFKEIELDQQERGYQSRSEYIRDLFRDRIVDKQWNNSKEDVVGVLTLVFDH 66 Query: 63 EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVR 122 +R L+ +++ QH+H + + HVH++H +CLE ++KG +V + + A +GV+ Sbjct: 67 HQRGLSEKLIEIQHNHLVHVLCSTHVHVDHHNCLETIIIKGQASEVNLLVNQISALKGVK 126 Query: 123 HGHLQ 127 L Sbjct: 127 VARLS 131 >UniRef50_C9M5I2 Toxin-antitoxin system protein n=2 Tax=Synergistaceae RepID=C9M5I2_9BACT Length = 143 Score = 138 bits (348), Expect = 5e-32, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 67/131 (51%), Gaps = 4/131 (3%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R + + + LL+ D ++G RSEA+R ++R + + Q + + ++ Y Sbjct: 12 LIRFGVAVPESLLKLFDKRFHKQGVPTRSEALRQLIRDFVTADTWQSGQGEVYGSITITY 71 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 H+ R+ +++ QHH+ D+ + T H+H N CLE+ +L+G + V+ +++ + + Sbjct: 72 NHDTREAGTKMTEIQHHYKDVILCTTHIHANERGCLEVIMLRGPVPRVKKLIEEMRSLKA 131 Query: 121 VRHGHLQCLPK 131 + L P Sbjct: 132 I----LSLTPV 138 >UniRef50_Q578T1 Nickel-responsive regulator n=36 Tax=Brucella RepID=NIKR_BRUAB Length = 132 Score = 137 bits (347), Expect = 8e-32, Method: Composition-based stats. Identities = 66/132 (50%), Positives = 95/132 (71%), Gaps = 1/132 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ-GFAVLSYV 59 MQR+TIT+DDDL+ LD + + +GY NRSEA+RD+ R+ L Q + ++ + VLSY Sbjct: 1 MQRITITIDDDLMAALDRMIEIKGYQNRSEALRDLARTGLQQASLEEGQMEACVGVLSYT 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+H RDL+ ++ +T H HH++SVA++HVH++HD CLE+++LKG DV+HFAD V A+R Sbjct: 61 YDHSARDLSKKLTNTHHDHHNISVASMHVHLDHDRCLEVSILKGKTDDVRHFADHVKAER 120 Query: 120 GVRHGHLQCLPK 131 V HG L LP Sbjct: 121 HVTHGTLAVLPL 132 >UniRef50_C1SLF1 Predicted transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLF1_9BACT Length = 138 Score = 137 bits (347), Expect = 8e-32, Method: Composition-based stats. Identities = 43/126 (34%), Positives = 76/126 (60%), Gaps = 1/126 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R++I++++ LLE + + + +RSE I+ ++RS L ++ GT A LS VY Sbjct: 4 VSRISISIEETLLEKFEKFLEDNNFPSRSEGIKYLIRSLLVEQEW-AAGTNIAASLSIVY 62 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H K L ++VS QH L V + HVH++H +C+E+ VLKGD +V+ +++ +G Sbjct: 63 DHHKSGLMEKLVSIQHDFEQLVVCSQHVHLDHLNCMEVLVLKGDAAEVKELHTRLMSVKG 122 Query: 121 VRHGHL 126 ++H L Sbjct: 123 LKHCSL 128 >UniRef50_Q0A737 Transcriptional regulator, CopG family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A737_ALHEH Length = 139 Score = 137 bits (347), Expect = 8e-32, Method: Composition-based stats. Identities = 56/130 (43%), Positives = 91/130 (70%), Gaps = 1/130 (0%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL-AQEATQQHGTQGFAVLSYVY 60 +RVT++L+ L D+ +RRGYNNRSEA+RD++R AL ++ ++ T VL+Y+Y Sbjct: 3 ERVTVSLESGLAAEFDNFLERRGYNNRSEAVRDLIRGALGSEALDERPDTPCVGVLTYLY 62 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H++R+LA R+ H H DL+V TLH+H++HD C+E +LKG+ ++ FA+ V+A+ G Sbjct: 63 DHKERELAKRLTEAHHAHFDLTVTTLHMHVDHDLCVEAVMLKGEAAQIEGFAESVMARPG 122 Query: 121 VRHGHLQCLP 130 ++HG L +P Sbjct: 123 IQHGRLHRIP 132 >UniRef50_B5IB41 NikR C terminal nickel binding domain family n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IB41_9EURY Length = 135 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 45/133 (33%), Positives = 75/133 (56%), Gaps = 1/133 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA-TQQHGTQGFAVLSYV 59 +QR +++DD LL+ D RRGY +RSEAIRD++R AL + T F ++ + Sbjct: 2 IQRFGVSIDDSLLKKFDDYIMRRGYISRSEAIRDLIRDALIENTITSDENVDVFGTITMI 61 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y+HE + + +I QH + + A +HVH++ +CLE+ +L G V+ AD + + + Sbjct: 62 YDHEVKGITEKITHIQHSYVNEIRAAVHVHVDERNCLEVVILHGKSKVVREIADKLGSLK 121 Query: 120 GVRHGHLQCLPKE 132 GV++ Q E Sbjct: 122 GVKNLKFQLTIVE 134 >UniRef50_C3XHL4 Nickel responsive regulator n=3 Tax=Proteobacteria RepID=C3XHL4_9HELI Length = 156 Score = 135 bits (341), Expect = 3e-31, Method: Composition-based stats. Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 5/136 (3%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ----GFAVL 56 + R +++L LL+ LDS + GY +RSE IRD++R L E + ++ VL Sbjct: 16 IIRFSVSLPLGLLDELDSKITQNGYTSRSELIRDMIREKLVDEKWDKGESEGTKEHLGVL 75 Query: 57 SYVYEHEKRDLASRIVSTQHH-HHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDV 115 +Y+H +R L + +H+ H + T HVH++H +CLE +LKG D++ ++ Sbjct: 76 VLIYDHHQRGLNQKKNEIEHNNHLVQIICTTHVHVDHHNCLETIILKGKKEDIEKLCIEI 135 Query: 116 IAQRGVRHGHLQCLPK 131 GV+ L Sbjct: 136 GGLLGVKFAKLTRTAS 151 >UniRef50_Q2IN94 Putative nickel-responsive regulator n=9 Tax=Deltaproteobacteria RepID=NIKR_ANADE Length = 139 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 51/129 (39%), Positives = 80/129 (62%), Gaps = 2/129 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA--TQQHGTQGFAVLSY 58 ++R+ I+L+D LLE D L +GY NRSEA+RD++R AL Q A + AV++ Sbjct: 2 LERIGISLEDGLLEQFDKLIAEKGYVNRSEAVRDLIRDALVQRAFTESSGREERVAVVTL 61 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 VY+H+ LA ++ QH +H V+ LHVH++ +CLE+ VL+G DV + ++A Sbjct: 62 VYDHDSSSLAQKLAHIQHENHRAVVSALHVHMDAHNCLEVLVLRGRGKDVVAMGESLVAT 121 Query: 119 RGVRHGHLQ 127 +GV++G L Sbjct: 122 KGVKYGKLV 130 >UniRef50_Q8TV90 Putative nickel-responsive regulator n=1 Tax=Methanopyrus kandleri RepID=NIKR_METKA Length = 141 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 4/134 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQ--HGTQGFAVLSY 58 + R +IT+ + LL+ ++ L + +RSE R LR L + + + F L+Y Sbjct: 8 LVRTSITVPEQLLQKVNELIASGYFASRSEIFRQALREYLQRIEWTERVGDEEYFGALTY 67 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 V++HE+ +V QH D+ ++T H+H++ + CLE+ +L+G + A + Sbjct: 68 VFQHER--AEPELVKVQHEFTDVIISTTHIHVSPEKCLEVLLLQGPGKRIAELAKRIRGV 125 Query: 119 RGVRHGHLQCLPKE 132 RGV L + E Sbjct: 126 RGVEQAKLTVVSSE 139 >UniRef50_Q17Z13 Putative nickel-responsive regulator n=26 Tax=Bacteria RepID=NIKR_HELAH Length = 148 Score = 132 bits (333), Expect = 3e-30, Method: Composition-based stats. Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 3/130 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH---GTQGFAVLS 57 + R +++L +LL+ LD+ + GY++RSE +RD++R L ++ + AVL Sbjct: 10 IIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDLIREKLVEDNWIEDSPDDKSKVAVLV 69 Query: 58 YVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIA 117 +Y+H +R+L R++ QH + T H+H++ +CLE +LKG +VQ ++ Sbjct: 70 VIYDHHQRELNQRMIDIQHASETHVLCTTHIHMDSHNCLETIILKGSSAEVQRLQLEIGG 129 Query: 118 QRGVRHGHLQ 127 RGV+ L Sbjct: 130 LRGVKFAKLT 139 >UniRef50_A7I1P3 Putative nickel-responsive regulator n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=NIKR_CAMHC Length = 138 Score = 131 bits (329), Expect = 1e-29, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 74/130 (56%), Gaps = 1/130 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH-GTQGFAVLSYV 59 + R ++TL ++L + ++ + Y +RSE IRD++R + + + + AVLS V Sbjct: 4 LARFSVTLPNELFDEINKRVKNTEYPSRSEFIRDLVREKIIADKWKDDSQSDAIAVLSIV 63 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y H + +L S+++ +HH + H+HI+ ++CLE+ L+G +++ F+ + + + Sbjct: 64 YSHHQNNLVSQMLELEHHADVKIACSTHIHIDKENCLEMISLQGSGKNIEKFSQKIGSLK 123 Query: 120 GVRHGHLQCL 129 GV+ +L + Sbjct: 124 GVKFSNLARI 133 >UniRef50_A6L9L6 Transcriptional regulator, putative nickel responsive regulator n=6 Tax=Bacteroidales RepID=A6L9L6_PARD8 Length = 133 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 69/128 (53%), Gaps = 1/128 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 ++R ++L+D+LLE+LD G+ NRS+AIR ++ +A+ Q + +Y Sbjct: 3 LKRFGVSLEDNLLESLDQYVNENGFANRSQAIRFLIEKNVAERKWQC-NHIVAGTIVIMY 61 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + K++++ +I Q ++ D+ +++ +IN + CL I + G + +D + +G Sbjct: 62 DQVKKEISLKITGIQQNYKDVILSSSQYYINQNFCLHIVTVMGTAHRLTELSDKLTTIKG 121 Query: 121 VRHGHLQC 128 ++HG L Sbjct: 122 IKHGKLVM 129 >UniRef50_Q2GAR7 Transcriptional regulator, CopG family n=2 Tax=Alphaproteobacteria RepID=Q2GAR7_NOVAD Length = 158 Score = 129 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 63/130 (48%), Gaps = 1/130 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQ-QHGTQGFAVLSYV 59 + R++++L +L LD + + RG +RS+ I +++R ALA+ + ++ V Sbjct: 8 LARLSMSLPGELFRQLDMMVEERGLPSRSQLIAELIRHALAEHEAYTRPDEMLAGTITIV 67 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y ++ + ++ TQ + +++ HV + D LE+ +++G ++ D + R Sbjct: 68 YRGDRGRVRHQLAQTQADYLKEVISSQHVFLEDDQSLEVLLVQGPAVRLKELCDALRRVR 127 Query: 120 GVRHGHLQCL 129 GV L Sbjct: 128 GVHQLKLVTT 137 >UniRef50_B9XA69 Putative transcriptional regulator, CopG family n=2 Tax=Verrucomicrobiales RepID=B9XA69_9BACT Length = 149 Score = 128 bits (323), Expect = 5e-29, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 69/128 (53%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R +I++ D LD + Q+RG+ NRS+ + ++R L A ++++VY Sbjct: 8 LVRFSISMPGDAARGLDEMVQQRGFANRSQCLTSMVRDQLVVHAGDMGDAVMMGLITFVY 67 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 H KR+L +R+ QH H ++ VH+ ++ L++ +++G ++ A ++ +G Sbjct: 68 NHRKRNLQNRLTDIQHLHLKEIISIQLVHLENEQSLQLMLVQGPAKSLRAIAAEIFCLKG 127 Query: 121 VRHGHLQC 128 V HG+LQ Sbjct: 128 VCHGNLQL 135 >UniRef50_Q18I31 Putative nickel-responsive regulator n=10 Tax=Halobacteriaceae RepID=NIKR_HALWD Length = 142 Score = 128 bits (323), Expect = 5e-29, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 68/134 (50%), Gaps = 1/134 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ-EATQQHGTQGFAVLSYV 59 M V++++ ++LLE +D + GY RSE R+ R+ L + E + + +++ V Sbjct: 1 MSVVSVSMPEELLERIDQFADDHGYTGRSEVFREASRNLLEEFEDKRLENRELMGIVTVV 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 +++E ++ +++ +H H D+ + H H+ C+E+ VL+G + + F + A + Sbjct: 61 FDYETTNVEEKMMHLRHEHEDIVASNFHSHVGGHHCMELFVLEGSLETISTFVGKIRATK 120 Query: 120 GVRHGHLQCLPKED 133 LP +D Sbjct: 121 NTLTIDYSVLPVDD 134 >UniRef50_B5JR54 NikR C terminal nickel binding domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JR54_9BACT Length = 143 Score = 128 bits (323), Expect = 5e-29, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 64/127 (50%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +RV+IT+ +L D L +RG++NRS+AI +IL + + ++ Y Sbjct: 6 ERVSITIPRSVLAKFDQLLVQRGFSNRSQAIAEILNREIIEATAHGEDQVMAGTITLFYS 65 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 + L S + Q H +++LHV + D +E+ V++G ++ A+++I +GV Sbjct: 66 TRRNTLQSTLSKIQRQHIAEVISSLHVQLEDDHIMEVLVVQGPAPKLRSIANELITCKGV 125 Query: 122 RHGHLQC 128 + G L Sbjct: 126 KTGKLNL 132 >UniRef50_C7JHT8 Transcriptional regulator CopG n=7 Tax=Acetobacter pasteurianus RepID=C7JHT8_ACEP3 Length = 159 Score = 127 bits (321), Expect = 7e-29, Method: Composition-based stats. Identities = 32/131 (24%), Positives = 65/131 (49%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R++++L +L LD++ +GY +RS+AI++IL L V+ Y Sbjct: 10 VSRISVSLPPGILHELDAMVAEKGYASRSQAIQNILHQELMASRKDCAEELMAGVIILFY 69 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + L+ ++ Q+ + +++LHV++ LE+ +++G + +Q AD + Q G Sbjct: 70 NNAATGLSQKLAELQYENLAEVISSLHVNLVRRQTLEVLLVQGQVKKLQEIADQFMTQSG 129 Query: 121 VRHGHLQCLPK 131 V G L + Sbjct: 130 VISGKLHLIAS 140 >UniRef50_B8GWH5 Nickel-responsive regulator NikR n=2 Tax=Caulobacter vibrioides RepID=B8GWH5_CAUCN Length = 162 Score = 127 bits (321), Expect = 9e-29, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 63/129 (48%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R++I+L +L+ LD++ RG +RS+ I +++R LA+ + ++ ++ +Y Sbjct: 11 LARLSISLPAELMVQLDAMVAERGLPSRSQMIAELIRHELAEHSGERPDAMLAGTITLIY 70 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 E + + TQ + ++ +V + D +E+ +++G +Q D + RG Sbjct: 71 RAESGRVRHALAQTQLGYVKEVISAQNVFLEDDQAMEVLLVQGPAERLQQLCDALRKVRG 130 Query: 121 VRHGHLQCL 129 V+ L Sbjct: 131 VQQIKLVTT 139 >UniRef50_Q18EC5 Transcription regulator; probably nickel responsive regulator n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18EC5_HALWD Length = 179 Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats. Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 1/130 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH-GTQGFAVLSYV 59 + R+++TL DLL L+ + + YN+RSEA RD LR+ + + Q + + Sbjct: 27 VDRMSVTLPPDLLSELNQVVETGEYNSRSEATRDALRAFVTEFNQQTRLSGTLSGTVVVL 86 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 YEHE + + QH + VA HVH++ CLE + G G ++ + Sbjct: 87 YEHEHSGVTDEMSELQHDFTETIVAVHHVHLSDHLCLESIAVDGAGGRIETLLSRIRPLE 146 Query: 120 GVRHGHLQCL 129 GVR L + Sbjct: 147 GVRQVKLAMV 156 >UniRef50_B4U5P2 Putative transcriptional regulator, CopG family n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5P2_HYDS0 Length = 139 Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 74/127 (58%), Gaps = 1/127 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 ++R+ IT+ +L++ +D ++ Y +RSE IRD++R A+ ++ + + VL +Y Sbjct: 9 VERICITIPKELVDFIDKKVEQS-YASRSEFIRDLIREAIVEDEWEDENNELIGVLVIIY 67 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H KR+L +++ QH+H+ + T H+HI+H++CLE ++KG + + + G Sbjct: 68 DHHKRELTQKLLDIQHNHYINILCTTHIHIDHNNCLETIMIKGPSQTIVETVNIIAGLNG 127 Query: 121 VRHGHLQ 127 V+ L Sbjct: 128 VKFAKLV 134 >UniRef50_Q31EP2 Transcriptional regulator, CopG family n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EP2_THICR Length = 157 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 63/129 (48%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R + +L +LE LD L RG+NNRS + +I++ ++ L+ VY Sbjct: 8 LVRTSASLPAKVLEDLDKLVIDRGFNNRSALLAEIIQREVSAYQQDHTNEVMAGTLTLVY 67 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H L ++ +H + +++ + + + LE+ +++G D+ + +++ RG Sbjct: 68 DHAVPGLQLKLNQLKHQYVAEIISSTQIQLMNHHTLEVNLMQGPAQDLNKISHKILSNRG 127 Query: 121 VRHGHLQCL 129 V+ G+L Sbjct: 128 VKTGNLYLT 136 >UniRef50_A3DKG0 Putative transcriptional regulator, CopG family n=1 Tax=Staphylothermus marinus F1 RepID=A3DKG0_STAMF Length = 134 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 1/120 (0%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 + I L +DL L + G RS+ I++ LR + + + + V+ VY Sbjct: 5 VKFGIYLPEDLARELGECMKITGIRKRSKIIQEALRLFIVEHRWKTV-GKASGVIGVVYN 63 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 HE R + + QH + D+ V+T+HVH++ + C+ +++GD G ++ +++ +GV Sbjct: 64 HEVRGVDEALTDIQHEYLDIIVSTVHVHLDKEKCMLAIIVRGDTGRIKELLSNIMNIKGV 123 >UniRef50_C5SGL4 Putative transcriptional regulator, CopG family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SGL4_9CAUL Length = 169 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 61/131 (46%), Gaps = 1/131 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQE-ATQQHGTQGFAVLSYV 59 + R++++L LL++ D + RG +RS A+ +++R A+A+ Q+ ++ V Sbjct: 9 LARLSMSLPGSLLDSFDKMVADRGLPSRSSAMTELIRGAVAEHAERQRPDDVVAGTVTLV 68 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 Y + + R+ Q +++ HV + +D LE+ +++G ++ D R Sbjct: 69 YASDSGTVRHRVAQKQLDFLKEVISSQHVFLENDQSLEVLLVQGPPSQLEDLCDGFRRIR 128 Query: 120 GVRHGHLQCLP 130 G+ L Sbjct: 129 GMYQVKLVTTA 139 >UniRef50_C8PGA0 Nickel-responsive regulator n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PGA0_9PROT Length = 143 Score = 121 bits (303), Expect = 9e-27, Method: Composition-based stats. Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 1/127 (0%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ-GFAVLSYVY 60 R +I+L L E LD + + + Y +RSE IRD++R + + G VL Y Sbjct: 10 VRFSISLPTKLFEDLDEMVRAKQYLSRSEFIRDLIREKMVEGVLHGDGEDDCVGVLCIAY 69 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H + DL ++V +HH + V+T H HI+ C E ++ + ++ + + A +G Sbjct: 70 DHHQSDLIEQLVEIEHHANVTIVSTSHFHIDERHCFEEITMRDKISKIERLSAKIGALKG 129 Query: 121 VRHGHLQ 127 V+ L Sbjct: 130 VKFSKLV 136 >UniRef50_Q5V2S1 Putative nickel-responsive regulator n=1 Tax=Haloarcula marismortui RepID=NIKR_HALMA Length = 139 Score = 121 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 70/134 (52%), Gaps = 1/134 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ-EATQQHGTQGFAVLSYV 59 M V+I++ D+L E +D+ + GY RSE +R+ +R+ + + E + + AV++ + Sbjct: 1 MGVVSISMPDELEERIDTFADEHGYTGRSEVVREAVRNLMGEFEDKRLEDRELMAVVTVL 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 +++E + +++ +H H + + H H+ C+E+ VL+G + D+ F V A + Sbjct: 61 FDYETTTVEEKMMHLRHDHESIVASNFHSHVGDRYCMELFVLEGQLEDISAFVGKVRATK 120 Query: 120 GVRHGHLQCLPKED 133 LP +D Sbjct: 121 DTLSVDYSVLPVDD 134 >UniRef50_A3V7Y8 Transcriptional regulator, CopG family n=2 Tax=Alphaproteobacteria RepID=A3V7Y8_9RHOB Length = 154 Score = 118 bits (297), Expect = 4e-26, Method: Composition-based stats. Identities = 56/131 (42%), Positives = 79/131 (60%), Gaps = 2/131 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M+R+T+TLDDDLL +D+ G NRSEAIRD++ ALA +A F + SY Sbjct: 1 MKRITMTLDDDLLAAVDAHMDASGATNRSEAIRDLVARALAPQAP--SDAACFGIASYTV 58 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 E + RDLA ++ + HHD A L V ++H LE+AVLKG + +V+ A+ + +RG Sbjct: 59 EPDIRDLARKVPQVRQDHHDQFAAALSVPVDHATSLEVAVLKGSVAEVETIANALFLERG 118 Query: 121 VRHGHLQCLPK 131 VRHG L +P Sbjct: 119 VRHGRLALVPV 129 >UniRef50_C7NP61 Transcriptional regulator NikR, CopG family n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NP61_HALUD Length = 172 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 2/120 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG-FAVLSYV 59 + RV++TL ++ + LD + Y +RSEA+RD LR + + + Sbjct: 13 LDRVSLTLPPEMTDRLDGIVTEWDYASRSEAVRDALRDFFTTYEWEGGDETRHYGTIVIA 72 Query: 60 YEH-EKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 +EH D+A R+ + QH + D+ + H+H++ D C+E V+ G G + A+ + A Sbjct: 73 HEHDHDSDVAGRLQTIQHEYADVVTSVQHIHLSEDRCMETLVVDGTAGQIDELANRLRAI 132 >UniRef50_C3N649 Putative nickel-responsive regulator n=10 Tax=Sulfolobus RepID=NIKR_SULIA Length = 133 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 64/125 (51%), Gaps = 4/125 (3%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 ++++I+L +L L+ R+G +RS+ + LR+ L + + + +++ VY+ Sbjct: 4 EKISISLPKELYRELEDFITRKGIPDRSKIFQIALRNYLDENR--EGTEIIYGIINLVYD 61 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 HE + + + QH + D ++TLH+H+N C+E +KG+ + + + RG+ Sbjct: 62 HE--EASEALTEIQHEYKDNIISTLHLHVNERLCIEAIAVKGEKSKLVELNNRLGQIRGI 119 Query: 122 RHGHL 126 L Sbjct: 120 LKARL 124 >UniRef50_B9Z9H3 Putative transcriptional regulator, CopG family n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9Z9H3_NATMA Length = 136 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 64/133 (48%), Gaps = 2/133 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH-GTQGFAVLSYV 59 M +++++ +L++ LDS+++R GY RSE +R+ R L + + Q +S Sbjct: 1 MPVISVSMPAELIDRLDSVAERHGYTGRSEVVREGSRVLLTEFEDDRPANQQLAGTVSVF 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 + E + + + + +H + D + H H+ D CL++ VL+ ++ + A Sbjct: 61 SDFETQPIERELTALRHEYEDSIASITHSHV-GDSCLDVLVLETARDELATVVGKLRAID 119 Query: 120 GVRHGHLQCLPKE 132 GV+ +P E Sbjct: 120 GVQTVEYSLVPLE 132 >UniRef50_A1RZK4 Transcriptional regulator, CopG family n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZK4_THEPD Length = 133 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 69/133 (51%), Gaps = 3/133 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M+R+++T+ D++ + L+ L++R +NRS + D + + +Q + G + + +Y Sbjct: 1 MRRISLTVPDEVYKALEELAERTRISNRSRLVSDAIMAYASQS--LEDGARYAGAIIVLY 58 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H + + + QH + + A+LH+H++ D CLE+ ++G+ G +++ + G Sbjct: 59 DHSRGETVYGVTDAQHDYPE-ISASLHMHLSEDLCLEVLGVRGEGGRLKNLISALRGVSG 117 Query: 121 VRHGHLQCLPKED 133 V + + Sbjct: 118 VITVQYSLVRLDQ 130 >UniRef50_A3M466 CopG n=14 Tax=Acinetobacter RepID=A3M466_ACIBT Length = 144 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 65/129 (50%), Gaps = 1/129 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R++IT+ + L LD + Y +RS+AI D++ L E Q L+ +Y Sbjct: 6 LARISITVPESTLNALDQKIVEQNYESRSQAIVDMINKHLIAEQAQA-NEVMVGTLTLLY 64 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + + L +++V Q +++LH+ ++ L++ +++G +++ + I +G Sbjct: 65 DASQMTLRNQLVDLQQQFLAQVISSLHIQLDQQKILQVMLMQGASSELRQISQQFIVLKG 124 Query: 121 VRHGHLQCL 129 V GHL+ + Sbjct: 125 VIKGHLELM 133 >UniRef50_A2BJB5 Nickel responsive regulator n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJB5_HYPBU Length = 137 Score = 115 bits (288), Expect = 6e-25, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 2/135 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH-GTQGFAVLSYV 59 M ++I+L ++LL+ +D ++ GY +RSE IR+ LR L+Q Q+ + +A++ + Sbjct: 1 MAVISISLPNNLLDKVDEYIEKYGYTSRSELIREALREYLSQRFPQETFTGKIYAIVVIL 60 Query: 60 YEHE-KRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 HE K + ++++T H + + H + CL IAV++ ++Q + Sbjct: 61 TNHEIKPSVDQKVINTIHSFQTIIKSFYHQLLEGSWCLNIAVVESTWNEIQALVKALRKI 120 Query: 119 RGVRHGHLQCLPKED 133 +G+ L E Sbjct: 121 QGIDRIWFIPLRIEQ 135 >UniRef50_A3K349 Transcriptionalregulator, CopG family protein n=1 Tax=Sagittula stellata E-37 RepID=A3K349_9RHOB Length = 155 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 81/133 (60%), Gaps = 2/133 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 MQR TI ++DDLL LD +R G NRSEAIR +LR +L ++ Q+ + V+SY Sbjct: 1 MQRTTIAIEDDLLAELDQQLERSGAINRSEAIRALLRRSLTRDTPQEV--ECIGVVSYTL 58 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + R+L R+ T H HD +VA L V ++H + +E+ V+ G + DV+ A + A+RG Sbjct: 59 DFSARELGRRVPHTCHSSHDQAVAALSVPLDHTNAMEVTVMSGRVADVEDDAHGLFAERG 118 Query: 121 VRHGHLQCLPKED 133 +RHG L +P +D Sbjct: 119 IRHGQLSLVPVKD 131 >UniRef50_A1RQZ3 Transcriptional regulator, CopG family n=4 Tax=Thermoproteaceae RepID=A1RQZ3_PYRIL Length = 132 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 69/133 (51%), Gaps = 5/133 (3%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 ++R++I LDD+L + ++ G NRS I ++ A++ + T ++++ VY Sbjct: 2 VRRISIVLDDELYKEMERYMTEIGEVNRSRFIASLI----AEKVGEAAKTPVASLIAIVY 57 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ-R 119 +HE D+A + QH +D+ HVH++ +CLE+ GD ++ + R Sbjct: 58 DHEVGDVAKHLTEVQHDFNDIIRVATHVHLDERNCLEVIHAVGDAQRIRELTSRISRIGR 117 Query: 120 GVRHGHLQCLPKE 132 G+R+ + +P+E Sbjct: 118 GIRYLKVVNIPRE 130 >UniRef50_B1M926 Putative transcriptional regulator, CopG family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M926_METRJ Length = 153 Score = 111 bits (279), Expect = 5e-24, Method: Composition-based stats. Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 1/131 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQ-HGTQGFAVLSYV 59 MQR+T+TLD +L+E +D +++ R Y RSEA+RD+LR LA+ ++ A ++V Sbjct: 1 MQRITVTLDHELVEAVDRIAEVRCYAGRSEAMRDLLRRGLAEARRERDPDHACVATFTFV 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 E RDL R+ Q HDL + + V ++H+ L VL+G + ++ F D + QR Sbjct: 61 AEAGVRDLGQRLAEEQRARHDLVITQVQVPLDHEAALHTLVLRGRVREIHAFVDAIATQR 120 Query: 120 GVRHGHLQCLP 130 GVRH L +P Sbjct: 121 GVRHDSLSIIP 131 >UniRef50_B1L5X4 Putative transcriptional regulator, CopG family n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L5X4_KORCO Length = 136 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 5/132 (3%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ--GFAVLSY 58 + R I++ +L+ LD L + +RS+AI + + +A+ + + Sbjct: 6 VSRTAISIPRELMSDLDDLLSQLNLKSRSKAISEAITLYIAERYWVLSDVEKEVAGAIIM 65 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 VY+H K S I QH + DL +T HVHI+ + C+E+ ++ G + V+ ++ A Sbjct: 66 VYDHHKE---SEITEVQHKYLDLIRSTSHVHIDEERCMEVLMVLGSLSRVRELFKELQAL 122 Query: 119 RGVRHGHLQCLP 130 +P Sbjct: 123 GTAEVLKPFLVP 134 >UniRef50_A3PPB2 Transcriptional regulator, CopG family n=3 Tax=Rhodobacter sphaeroides RepID=A3PPB2_RHOS1 Length = 157 Score = 111 bits (277), Expect = 9e-24, Method: Composition-based stats. Identities = 43/133 (32%), Positives = 69/133 (51%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M R TITLD++L +D+ R NRSEAIRD++R LA + T V+S Sbjct: 1 MIRTTITLDEELAAEIDAHVARSAVPNRSEAIRDLVRRGLAAGPAKPADTLCIGVISCAM 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 E +L+ R+ + HD V +NH + +++ VL+ + ++ AD + +RG Sbjct: 61 EQTLPELSRRVRDARLARHDEIRFVTSVPLNHRETIDLIVLQASVSRIEELADRLSLERG 120 Query: 121 VRHGHLQCLPKED 133 VRH + +P E+ Sbjct: 121 VRHATVGLIPIEE 133 >UniRef50_Q58177 Uncharacterized transcriptional regulator MJ0767 n=9 Tax=Methanococcales RepID=Y767_METJA Length = 135 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 63/133 (47%), Gaps = 7/133 (5%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 ++R++I+ LL+ +D + +++GY++RSE IRD +R + + ++ VY Sbjct: 4 VERISISFPKFLLKEIDEVVKKKGYSSRSELIRDAVRKYVLENNPLNKNETVSGIIIVVY 63 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDC-----LEIAVLKGDMGDVQHFADDV 115 K L +S + H+ + +L+ C +EI V++G+ D+ F +++ Sbjct: 64 NPTKEALEK--MSKLYFEHNKVIKSLNQAYVTTSCGKNAKVEIFVVEGNSKDISKFYEEI 121 Query: 116 IAQRGVRHGHLQC 128 G + + Sbjct: 122 EKINGKIYDKVII 134 >UniRef50_D2RX96 Transcriptional regulator NikR, CopG family n=4 Tax=Halobacteriaceae RepID=D2RX96_9EURY Length = 132 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 2/128 (1%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 R + + D+LL D Q G+++RS A+R+ ++ + + G + ++ Sbjct: 1 MRTSFNIPDELLAEFDRTWQTEGFDSRSRAVREAMQEYIESHT-ELETVSGDVTTALAFD 59 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 ++ D+ + QH D+ T H H D CLE +G+ V+ + V Sbjct: 60 YQHEDVIRELHDVQHDFQDVITTTSHTH-EGDWCLETIFCRGEAARVRKLVYRLRDFDAV 118 Query: 122 RHGHLQCL 129 + L Sbjct: 119 GQVKVLLL 126 >UniRef50_A6G2I6 Nickel responsive regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G2I6_9DELT Length = 126 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 38/113 (33%), Positives = 70/113 (61%) Query: 13 LETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIV 72 ++ D + G+ NRSEA+RD++R+ L +E + + A ++ +Y+H KR L+ +I Sbjct: 1 MDRFDRFVENSGHGNRSEAVRDLIRARLVEEEWGEGAEEAVASVTLIYDHAKRRLSRQIE 60 Query: 73 STQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGH 125 H HHD+ ++++H+H++ CLE+ VL+G +++H A+ +I GV HG Sbjct: 61 EHGHEHHDVVLSSMHIHVSEHACLEVVVLRGHPDEIKHVANHLIGLPGVLHGR 113 >UniRef50_A9GSQ5 Putative transcriptional regulator, CopG family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GSQ5_SORC5 Length = 140 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 1/127 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + R + +D LL D +GY NRSEA+RD++R+ L A G + A L+ VY Sbjct: 4 LVRFGVAMDRALLAEFDRRITAQGYENRSEALRDLVRADLT-RAALDEGAEVAATLTLVY 62 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 E E R+L RI + V++L V ++ L++ VLKG ++ A + +G Sbjct: 63 EPEVRELVLRISELEERRAGSLVSSLLVRLDAARLLQVMVLKGRGQELSELAGQLAGAKG 122 Query: 121 VRHGHLQ 127 V L Sbjct: 123 VLSCALT 129 >UniRef50_Q3ITC6 Probable transcription regulator n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3ITC6_NATPD Length = 137 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 3/134 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGT-QGFAVLSYV 59 M V++++ LL+ LD Y+ RSEA+R+ R L + Q T +++ + Sbjct: 1 MPVVSVSMPASLLDRLDEFIDEHDYSGRSEAVREGTRKVLTEFDDQSVPTSPAVCIVAVM 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 ++H+ D S + + +H H +L + +H H + CLE+ V +G++ + F V Sbjct: 61 FDHDT-DAESSLSTLRHEHDELVTSNVHSHA-GEACLELFVAEGEVDAIGTFVSRVRTVD 118 Query: 120 GVRHGHLQCLPKED 133 GV + D Sbjct: 119 GVGSVEYTFVDDND 132 >UniRef50_B8D4E8 Putative transcriptional regulator, CopG family n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D4E8_DESK1 Length = 141 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 2/131 (1%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +++ I L DL E + +R G + S +++ LR+ L E + G + +Y+ Sbjct: 13 RKIGIYLPGDLEELVIEYLKRHGGRSISSLVQEALRTYLMSE--EIPGCNLVGYIMVLYK 70 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 H D+ + QH + + H+HI+ + CL +G D + V + RG+ Sbjct: 71 HGMGDIDRELTEIQHEYIGSVLFENHIHIDEERCLMTIAFRGRYSDFESLMKKVRSLRGM 130 Query: 122 RHGHLQCLPKE 132 C+ + Sbjct: 131 ILVKHLCVCVD 141 >UniRef50_O26703 Putative nickel-responsive regulator 1 n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=NIKR1_METTH Length = 127 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 4/129 (3%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH-GTQGFAVLSYV 59 M V+++L + LLE +D+L G++ RS+ IR R + ++ + AVL + Sbjct: 1 MVVVSVSLGEKLLEEIDALRDELGFSGRSDVIRVAARMLIDEKRNLHELNGEINAVLFLI 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 + DL + +H + D+ LH H+ +CLE+ +++G+ V+ A+ +A Sbjct: 61 HPRRVEDL---VTKIKHDYEDIIGTQLHSHLKDGNCLELFIIEGESMRVRELAERFLACG 117 Query: 120 GVRHGHLQC 128 ++H L Sbjct: 118 KMKHIKLVT 126 >UniRef50_D2RV27 Transcriptional regulator NikR, CopG family n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RV27_9EURY Length = 160 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 20/152 (13%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQ-HGTQGFAVLSYV 59 M V++++ DL++ LD+ + Y RSE +R+ R+ LA+ + V+S Sbjct: 1 MPIVSVSMPADLIDRLDTHAADHDYTGRSEVVRESARTLLAEFEDDRLEDRPLAGVVSVF 60 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDD-C------------------LEIAV 100 YE + + R+ +H + D+ +T H H+ C +++ V Sbjct: 61 YEFGSQRVERRVTELRHEYDDVVASTDHGHVGEGCGCPSCDTDRDPESRSEPGYFVDLFV 120 Query: 101 LKGDMGDVQHFADDVIAQRGVRHGHLQCLPKE 132 L+GD+ + F + A V +P + Sbjct: 121 LEGDLEAMSTFVGTLRAIEAVDRVDYSLVPLD 152 >UniRef50_D1JIB2 Putative nickel responsive regulator 1 n=2 Tax=environmental samples RepID=D1JIB2_9ARCH Length = 127 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 57/126 (45%), Gaps = 2/126 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M ++I+L D++L +D L + G++ RSE +R R LA ++ + + Sbjct: 1 MAIISISLTDEILNEIDRLQKELGFSGRSEVMRAGARMLLADNREKEKLEGMLNSVLLLI 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 + + + + +H D+ +H H+ D C+E+ +L+GD ++ R Sbjct: 61 --HAQKVEDTVTAIKHEFEDIISTQIHNHLREDKCIEVFILEGDAARIKDLVRLFQTTRK 118 Query: 121 VRHGHL 126 + + L Sbjct: 119 MDYVKL 124 >UniRef50_C7NX71 Transcriptional regulator NikR, CopG family n=2 Tax=Halobacteriaceae RepID=C7NX71_HALMD Length = 136 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 1/119 (0%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQ-HGTQGFAVLSYV 59 + R+++TL ++ LD + Y++RSEAIRD LR + T + V Sbjct: 5 LDRISLTLPAEMTTRLDDIVDDWEYDSRSEAIRDALRDFFGAYEWESADDTVHHGTVVVV 64 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQ 118 ++H +A ++ + QH DL + H+H++HD C+E V++G + A+ + A Sbjct: 65 HDHHVDGIADQLQTIQHEMADLITSVQHIHLSHDTCMETLVVEGAGTAITELANRLRAI 123 >UniRef50_Q5V799 Transcriptional regulator n=3 Tax=Halobacteriaceae RepID=Q5V799_HALMA Length = 135 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 4/129 (3%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEAT-QQHGTQGFAVLSYVY 60 R ++ + +D+LE D Q G ++RS AIR+ ++ + + ++ + AVL++ Y Sbjct: 1 MRTSLNVSEDILEEFDETWQAEGLDSRSRAIREAMQEYIEGHSQLEEVSGEVVAVLAFDY 60 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 +H ++ + S QH D+ H H + CLE GD V+ + G Sbjct: 61 QHH--EVIHDLHSAQHQFQDVIETMSHTH-QGEWCLETVFCHGDAARVRELVYRLRDFDG 117 Query: 121 VRHGHLQCL 129 V L Sbjct: 118 VGRVKTMLL 126 >UniRef50_Q2VNK9 Probable nickel responsive regulator n=1 Tax=Methylocapsa acidiphila RepID=Q2VNK9_METAI Length = 139 Score = 99.8 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 49/105 (46%), Positives = 71/105 (67%), Gaps = 1/105 (0%) Query: 23 RGYNNRSEAIRDILRSALAQEATQQHG-TQGFAVLSYVYEHEKRDLASRIVSTQHHHHDL 81 RGY+NRSEA+RD+ R+ + Q + + A L YVY+H R+LA R+ H HHDL Sbjct: 4 RGYHNRSEAMRDLARAGMQQAGVESSEAGECVAALVYVYDHTVRELAKRLADAHHAHHDL 63 Query: 82 SVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHL 126 SVA+ + ++H C+E+A+L+G G V+ FA+ +IA+RGVRHG L Sbjct: 64 SVASTQIRLDHASCMEVALLRGVTGTVRQFAEHLIAERGVRHGRL 108 >UniRef50_D2RG21 Putative transcriptional regulator, CopG family n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RG21_ARCPR Length = 126 Score = 99.1 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 9/129 (6%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M+R +++ +DL + LD L+++ G +RSE +R+ LR+ LA+ + +++ V Sbjct: 1 MRRFGVSIPEDLAKALDDLAEKLGV-SRSEVVREALRTYLAEHTHYTVKHRCCGMITVV- 58 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR- 119 R + + + ++ H+H+ D C+ V+ GD + ++ Sbjct: 59 ---TRGF-KDLTAVE-KFKEVVNTFSHIHV-EDYCISSFVVYGDSDKIAELHKALLRVSE 112 Query: 120 GVRHGHLQC 128 VR L+C Sbjct: 113 NVRFIPLEC 121 >UniRef50_A2BJS7 Predicted transcriptional regulator, NikR n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJS7_HYPBU Length = 137 Score = 97.9 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 58/132 (43%), Gaps = 5/132 (3%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +R ++L + L E LD+L++ G +RS+ + ++ + + V+ V Sbjct: 5 RRFGVSLPERLAEKLDALTRIMGV-DRSKLVERAVQILIEDYEHYIREHTCYGVMIVV-- 61 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG- 120 + + D+ +A+ H H++ C+E+AV++G + ++ Sbjct: 62 PGVDNQHISVGRVFESFRDIVLASSHYHVDGR-CVEVAVVRGPSKKIAELHTELERLGCR 120 Query: 121 VRHGHLQCLPKE 132 VR+ L LP++ Sbjct: 121 VRYVPLAGLPED 132 >UniRef50_A2BJM7 Putative nickel responsive regulator n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJM7_HYPBU Length = 139 Score = 95.6 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 3/125 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + + ++L D+L E L SL+QR GY + S+AIRD + +A VL + Sbjct: 2 VVKTGVSLPDELYEKLVSLAQRAGYPSISKAIRDAVELFIAFNTWWSSQGPVTGVLHLLA 61 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 E + S I ++ A L+ + I V++G+ G ++ + RG Sbjct: 62 EAKHG---SEIQEALQDAEEVVEAVLYRRLGASYIAVIVVVEGEPGRIKDLYKKLTRLRG 118 Query: 121 VRHGH 125 V Sbjct: 119 VLAVQ 123 >UniRef50_A0RWH0 Transcriptional regulator n=3 Tax=Thaumarchaeota RepID=A0RWH0_CENSY Length = 131 Score = 95.2 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 57/128 (44%), Gaps = 2/128 (1%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 + ++++L+ +++ LD L + G+ RSE +R +R+ + +E +Q + + V Sbjct: 6 RIISVSLNSEMIRELDKLQESLGFTGRSEIVRAGIRTFVQEEKQKQGMEGKKSAILLVV- 64 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 + ++ + + L LH I+ C+E+ +L GD ++ + + + Sbjct: 65 -HADEFDGQVAGIKRDYEALIRTHLHNTIDGGRCVELFLLDGDAKRIESVTRGFLTNKNM 123 Query: 122 RHGHLQCL 129 L L Sbjct: 124 DSAKLVIL 131 >UniRef50_A3DLG8 Transcriptional regulator, CopG family n=1 Tax=Staphylothermus marinus F1 RepID=A3DLG8_STAMF Length = 136 Score = 95.2 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 7/129 (5%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +R +++ ++ E LD L++ G ++RS + + LR+ L + + V Sbjct: 5 RRFGVSIPSNIAEALDKLAELTG-SDRSSIVAEALRTYLHDHLHYMVPHKCTGFIIVV-N 62 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG- 120 EK AS ++ D+ H H C+EI + G G + + + Sbjct: 63 KEKNISASIVID---KFKDIIQNYNHTHYRG-KCIEIFFVSGYSGRIAELDKKLRSMGCS 118 Query: 121 VRHGHLQCL 129 VR+ LQ Sbjct: 119 VRYIPLQTT 127 >UniRef50_A2BMU8 Conserved crenarchaeal protein n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BMU8_HYPBU Length = 126 Score = 89.4 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 56/132 (42%), Gaps = 10/132 (7%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +R I++++ + + L+ LS + G NRS I + ++ L + +L Sbjct: 3 RRFGISINESIAKMLEVLSNQTGV-NRSRLIEEAIKGYLEDHSHLLVPHDCKGILV---- 57 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDV--IAQR 119 + ++ + + ++ VA LH H+N C+E +G+ + ++ + Sbjct: 58 -AHCPASGQLSNITEEYSEVIVAWLHAHLNE-ACMEAFFAEGESRKIMGLYSEILKRGCK 115 Query: 120 GVRHGHLQCLPK 131 G R+ + +P Sbjct: 116 G-RYIPVGNVPP 126 >UniRef50_Q9Y8R3 Nickel responsive regulator n=1 Tax=Aeropyrum pernix RepID=Q9Y8R3_AERPE Length = 128 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 56/126 (44%), Gaps = 4/126 (3%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 + V+++L D L+ +D + G+ +RS+ I+ L++ L E + G+ + + Sbjct: 2 VTVVSVSLPDHLVRKVDRAVEEYGFKSRSDLIKTALQTFLEDEDNKSSGSYRL--IVVLS 59 Query: 61 EHEKRD-LASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR 119 +H+ + IV H + + +A H + C+ IAV+ G D + + + Sbjct: 60 DHKSSPYVDKNIVGLIHSYSEELIALYHQILQGPYCITIAVVGGK-DDWRTIVKKLRSLS 118 Query: 120 GVRHGH 125 GV Sbjct: 119 GVLSVQ 124 >UniRef50_B1L3A9 Putative transcriptional regulator, CopG family n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L3A9_KORCO Length = 126 Score = 87.9 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 58/130 (44%), Gaps = 9/130 (6%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +R I++ +DLL+ LDSLS+ NRS IR+++ ++ + + +L V Sbjct: 3 RRFGISIPEDLLDKLDSLSREL-MVNRSSLIREMIEESIEDRSHLLTPHECTGILLVV-S 60 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGV 121 D + + ++ H H + D C++I ++ ++ ++ +GV Sbjct: 61 RGSEDAGRVL----EKYCKCIISRSHHH-SEDCCVDINFVRAKSEEILKLERELRRIKGV 115 Query: 122 --RHGHLQCL 129 R+ L C+ Sbjct: 116 SERYIPLSCI 125 >UniRef50_A4YI93 Transcriptional regulator, CopG family n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YI93_METS5 Length = 128 Score = 86.7 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 6/126 (4%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 ++++++ LD + L L ++ G +RS I+ + LA+ + + F +L+ VY Sbjct: 3 VEKISVALDKETLRRLQRRAEDEGV-SRSRLIQMAVSEYLAEFTGE--DEEVFGILNLVY 59 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 E D + I S +H H ++TLHVH+N C+E +KG +++ A + A Sbjct: 60 E---EDGSDEITSVEHQHEASIISTLHVHVNEKLCMEAIAVKGKRRELERLARRLSAINK 116 Query: 121 VRHGHL 126 V+ L Sbjct: 117 VKKAKL 122 >UniRef50_A1RWF4 Transcriptional regulator, CopG family n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWF4_THEPD Length = 130 Score = 86.4 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 4/115 (3%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +RV ++LD D+ E L+ +++ +RS + R L ++ V+ Y+ Sbjct: 5 RRVGVSLDGDVFEELERVAKAFN-TDRSHIVNMAAREYLLEKFHYAKPHSCEGVMIISYD 63 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVI 116 + + L V+ H H CLEI LKGD ++ V Sbjct: 64 PARG---QEVAEAIEESKSLVVSRSHFHTGDGCCLEILYLKGDSEEIWLLEKRVS 115 >UniRef50_Q60386 Uncharacterized transcriptional regulator MJ0080 n=4 Tax=Methanocaldococcus RepID=Y080_METJA Length = 127 Score = 86.0 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 53/132 (40%), Gaps = 5/132 (3%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY 60 M+R+++T++ +LL+ +D + + +RSE IR L + + ++ +Y Sbjct: 1 MERISLTIEKNLLKEVDEIINKERI-SRSEFIRRALEYYVKKYDWLSRIESKIGEITVIY 59 Query: 61 EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG 120 IV + + D+ + +L + + + +KG + F + + Sbjct: 60 N---SKAVEDIVKLESQYKDIVIISLEIPFEG-KIIRMIAIKGQRDRIIEFTNKLKGISS 115 Query: 121 VRHGHLQCLPKE 132 V L + E Sbjct: 116 VELAQLTTISIE 127 >UniRef50_Q9YEP4 Putative uncharacterized protein n=1 Tax=Aeropyrum pernix RepID=Q9YEP4_AERPE Length = 128 Score = 85.6 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 47/130 (36%), Gaps = 6/130 (4%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +R +++ +DL + LD S+R G RS + + + L ++ Sbjct: 4 RRFGVSIPEDLAQRLDEASRRLGVE-RSRLVEKAVEALLEDYRHLLTRHSCSGIIIVSCP 62 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQR-G 120 I + D+ A LH H C+E +++GD + + + G Sbjct: 63 PRGEA---EIATAVEKFRDIVAARLHSHTTGR-CIEAIIVEGDSMRIAMLHRQLESVGCG 118 Query: 121 VRHGHLQCLP 130 R+ + P Sbjct: 119 ARYISMPLHP 128 >UniRef50_Q7MS86 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MS86_WOLSU Length = 78 Score = 85.6 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 42/72 (58%) Query: 56 LSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDV 115 L+ VY+H +R+L +++ QH+ H + HVHINH +CLE +LKG +++ A + Sbjct: 2 LTIVYDHHQRELNQKMIDIQHNSHIHILCNTHVHINHHNCLETIILKGIPKEIEEIALSI 61 Query: 116 IAQRGVRHGHLQ 127 +GV+ L Sbjct: 62 GGLKGVKFSKLT 73 >UniRef50_A3MUX0 Transcriptional regulator, CopG family n=5 Tax=Thermoproteaceae RepID=A3MUX0_PYRCJ Length = 122 Score = 79.8 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 8/118 (6%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA-TQQHGTQGFAVLSYV 59 M+R ++L ++ E ++S++ G RSE + + +++ L + Q VL + Sbjct: 1 MKRFGVSLPKEVAEAVESIAAELGVT-RSEVVANAVQAYLESRRGHAEPSHQCLGVLMAL 59 Query: 60 YEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIA 117 S + H + +A H+H+ CL I V++GD V+ + +V Sbjct: 60 SNS-----FSDLSDVVERHKEAILAYTHLHVEG-KCLTIFVVRGDGPQVERLSMEVSK 111 >UniRef50_UPI0000D54CF8 hypothetical protein P700755_30935 n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D54CF8 Length = 142 Score = 79.0 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 52/137 (37%), Gaps = 6/137 (4%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSY--- 58 Q ++ + D + L+SL +R GY NRS +RD A+ + A + Sbjct: 3 QIISFSADRNFAGDLESLIERSGYANRSRFLRDAA-LFFAEMKQRGELMNIDANIIIEGH 61 Query: 59 VYEHEKRDLASRIVSTQHHHHDLSVATLHVHINH--DDCLEIAVLKGDMGDVQHFADDVI 116 + H + +++ ++ +++ + H C+++ ++G D++ + + Sbjct: 62 LVVHYEHGADQKLMVSRTGSIEVAAYHHSSRLGHSCHLCVDVIHVRGAASDIREVYNKLQ 121 Query: 117 AQRGVRHGHLQCLPKED 133 V P Sbjct: 122 NTPNVDKVSFTIAPLRQ 138 >UniRef50_B1L6V8 Putative transcriptional regulator, CopG family n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L6V8_KORCO Length = 81 Score = 59.8 bits (144), Expect = 3e-08, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 29/53 (54%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGF 53 M V+ + + L++ L+ L + G+ ++SEAIR+ +R + + + G + Sbjct: 29 MVVVSFHIPNSLMKELERLVEEVGFTSKSEAIREAIRLLIREYKKKSAGGVAY 81 >UniRef50_D2PD24 CopG domain protein DNA-binding domain protein n=9 Tax=Sulfolobus RepID=D2PD24_SULIS Length = 50 Score = 56.3 bits (135), Expect = 3e-07, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGT 50 M+ +T+ L + LE +D L Y +RSE IR + + +E Sbjct: 1 MKIITVKLPEQFLEAIDELVNTGRYGSRSEVIRAAIGDFIRKELWVTTEE 50 >UniRef50_Q8ZX60 Putative uncharacterized protein n=1 Tax=Pyrobaculum aerophilum RepID=Q8ZX60_PYRAE Length = 111 Score = 55.5 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 26/43 (60%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQE 43 M +++ + +LE LD L +R + NRSEAIR LR L +E Sbjct: 45 MSLISVHVPKKMLEELDELVRRGIFPNRSEAIRAALRDLLYKE 87 >UniRef50_Q2RPB0 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain n=4 Tax=Alphaproteobacteria RepID=Q2RPB0_RHORT Length = 87 Score = 55.2 bits (132), Expect = 7e-07, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 26/53 (49%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGF 53 ++R+TIT+ DL E L Y + SE +R+ LR + + Q+ + Sbjct: 4 VERMTITMPKDLAEALRQTVAGGEYASTSEVVREALRDWMGRRDAQRPDLETV 56 >UniRef50_A1RUT5 Transcriptional regulator, CopG family n=5 Tax=Thermoproteaceae RepID=A1RUT5_PYRIL Length = 76 Score = 54.8 bits (131), Expect = 8e-07, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 26/43 (60%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQE 43 M +++ + +LE LD L +R + NRSEAIR LR L +E Sbjct: 10 MSLISVHVPKKMLEELDELVRRGIFPNRSEAIRAALRDLLYKE 52 >UniRef50_C0G2W8 CopG domain protein DNA-binding domain protein n=1 Tax=Natrialba magadii ATCC 43099 RepID=C0G2W8_NATMA Length = 118 Score = 54.8 bits (131), Expect = 1e-06, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 23/38 (60%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRS 38 M ++ + + LLE LD L+ Y NRSE IR++LR Sbjct: 37 MVKLNVKVPKRLLEELDELAAELNYTNRSEFIREVLRD 74 >UniRef50_A2BJ34 Transcriptional regulator n=6 Tax=Thermoprotei RepID=A2BJ34_HYPBU Length = 65 Score = 54.0 bits (129), Expect = 2e-06, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 27/51 (52%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ 51 M+ VT+ + + LE LD L + Y++RSEAIR +R L +E Sbjct: 1 MRLVTVKMPETYLEGLDELVKMGRYSSRSEAIRIAVRELLKRELWGIPEHP 51 >UniRef50_Q5JJ81 Transcription regulator, CopG/RepA family n=1 Tax=Thermococcus kodakarensis RepID=Q5JJ81_PYRKO Length = 80 Score = 53.6 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 27/51 (52%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG 52 +V++ L L E +DSL + ++NRS+ I++ +R L + + + Sbjct: 5 VKVSVRLPPKLAEEIDSLVKAGLFSNRSDLIKEAIRHYLRELRKELTEEER 55 >UniRef50_A4YIW8 Putative transcriptional regulator, CopG/Arc/MetJ family n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YIW8_METS5 Length = 48 Score = 52.5 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 22/45 (48%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEAT 45 M+ +T+ L + LE +D L Y RSE IR + + +E Sbjct: 1 MKIITVKLPEQFLEAMDELVNTGRYETRSEVIRAAIGDFIRKELW 45 >UniRef50_Q9HHQ0 Vng6288c n=2 Tax=Halobacterium salinarum RepID=Q9HHQ0_HALSA Length = 92 Score = 52.5 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 24/38 (63%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRS 38 M ++ + + LL+ LD LS+ Y NRSE IR++LR Sbjct: 15 MVKLNVKVPKRLLDELDELSEELNYTNRSEFIREVLRD 52 >UniRef50_B8D3L5 Putative transcriptional regulator, CopG family n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D3L5_DESK1 Length = 132 Score = 52.5 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 46/110 (41%), Gaps = 8/110 (7%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +R +++ + E LD+L+ + +RS + + L + + + + V+ Sbjct: 7 KRFGVSVPYHVAEKLDNLAGLF-HCDRSTIVSNALNEYIHENLHEDREHKCRGVIVV--- 62 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHF 111 + + L S I+S + + + VH ++ + + +++G + Sbjct: 63 YSQSPLPSSIIS----RYSSVITSYSVHRMGNEFIIVIIVEGSSKLISEL 108 >UniRef50_Q9HHW8 Vng6193h n=3 Tax=Halobacterium salinarum RepID=Q9HHW8_HALSA Length = 92 Score = 52.1 bits (124), Expect = 5e-06, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 25/50 (50%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGT 50 M+++ + + LL +D + + RGY +SE IRD LR A+ Sbjct: 13 MEKINVRVPQSLLAQVDEVWEERGYATKSEFIRDALRDAVNPPTQLSEEA 62 >UniRef50_C6A437 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain n=10 Tax=Thermococcaceae RepID=C6A437_THESM Length = 63 Score = 52.1 bits (124), Expect = 5e-06, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 28/52 (53%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG 52 M+ +++ L L+ LD L +R Y NRSEAIR+ +R + +E + Sbjct: 4 MKIISVQLPQGLINALDVLVRRGVYPNRSEAIREAIRELVKRELYVMESEER 55 >UniRef50_A4J8J6 Transcriptional regulator, CopG family n=6 Tax=Firmicutes RepID=A4J8J6_DESRM Length = 91 Score = 51.7 bits (123), Expect = 7e-06, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG 52 ++R+ I+L D LLE +D++ + NRSE IR+ ++ +A+ + Q Sbjct: 6 IKRIMISLPDSLLEEVDNIVEEERV-NRSEFIREAMKLYIAERKRRLLREQM 56 >UniRef50_A1RWD2 Transcriptional regulator, CopG family n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWD2_THEPD Length = 82 Score = 51.3 bits (122), Expect = 9e-06, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 27/56 (48%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLS 57 + V++ L L++ LD L Q+ + NRS+AIR+ +R L ++ Sbjct: 24 KIVSVKLPVGLIDALDELIQKGYFQNRSDAIREAIRKLLTNYRELDSRKISSGLMV 79 >UniRef50_Q4JBZ9 Conserved protein n=4 Tax=Sulfolobus RepID=Q4JBZ9_SULAC Length = 65 Score = 50.9 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 27/42 (64%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ 42 ++ ++ LDDD L+ +D + + GY NRS+ IRD + +++ Sbjct: 19 VKTISFKLDDDFLQEVDKMVRLLGYTNRSDLIRDAILEYISE 60 >UniRef50_C1V617 Transcriptional regulator, CopG family n=12 Tax=Halobacteriaceae RepID=C1V617_9EURY Length = 59 Score = 50.9 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 28/51 (54%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ 51 M+RVT+ + +E ++ + + + NRSEAIR +R L ++ + + Sbjct: 1 MERVTLRIPKQQIEEVERMVETGEFPNRSEAIRSAVREMLNEQQVEGRESS 51 >UniRef50_Q7NGA1 Gll3272 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NGA1_GLOVI Length = 101 Score = 50.9 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFA 54 T+ L DLLE +D QR + +RSE + LR LA + + + A Sbjct: 14 TTLALPADLLEAIDREVQRGAFRSRSEFVTFALRRELAAQERARIDAEFAA 64 >UniRef50_Q6X3J4 NikR family transcriptional regulator protein-like protein n=12 Tax=cellular organisms RepID=Q6X3J4_PSEAE Length = 110 Score = 50.5 bits (120), Expect = 2e-05, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 10/79 (12%) Query: 6 ITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKR 65 + L D L + ++ L + Y NRSE IR LR L QEA + + Sbjct: 26 VVLPDPLEQDINELVETGRYQNRSEVIRAGLRLLLQQEAQNSAKLEAL----------RN 75 Query: 66 DLASRIVSTQHHHHDLSVA 84 +S ++ + +D + Sbjct: 76 ATSSGLMQLERGEYDEITS 94 >UniRef50_B9ZCU1 Putative transcriptional regulator, CopG family n=2 Tax=Natrialba magadii ATCC 43099 RepID=B9ZCU1_NATMA Length = 93 Score = 50.1 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGT 50 ++ + + LLE +D +RRG +RSEA+RD LR + T Sbjct: 16 KIDVRVPSRLLEKIDEEYERRGDTSRSEAVRDALRDWIDPPTRLSDET 63 >UniRef50_Q2RGI4 Transcriptional regulator, CopG family n=11 Tax=Clostridia RepID=Q2RGI4_MOOTA Length = 91 Score = 49.8 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG 52 ++R+ I+L + LL +D L+ NRSE IR+ ++ + + + Q Sbjct: 4 VKRIMISLPESLLAEVDGLAN-LEKRNRSEFIREAMKLYITERKRRNIREQM 54 >UniRef50_D0U4G3 CopG/Arc/MetJ family n=1 Tax=uncultured SUP05 cluster bacterium RepID=D0U4G3_9GAMM Length = 75 Score = 48.6 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 24/43 (55%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQ 46 + I+L D L +D GY + SE IRD++R A+EA + Sbjct: 1 MNISLPDQLKSHIDQRVSHDGYGSSSEFIRDLIRKDQAEEAEK 43 >UniRef50_B5ISV0 Ribbon-helix-helix protein, copG family n=1 Tax=Thermococcus barophilus MP RepID=B5ISV0_9EURY Length = 92 Score = 47.8 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 24/43 (55%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA 44 ++T+ + + + +D L + Y+NRSE +++ LR + + Sbjct: 6 VKITVRIPAGIAKMIDELVEAGLYSNRSEVVKEALREFVLSKK 48 >UniRef50_C5A3Q2 Transcription regulator, copG/nikR family n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A3Q2_THEGJ Length = 94 Score = 47.4 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 23/39 (58%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL 40 +V++ L+ +D L ++ +++RSE I++ +R L Sbjct: 11 DKVSVRFPSGLMRQIDELVEKGEFSSRSELIKEAVRFFL 49 >UniRef50_D2EEU4 Nucleotidyl transferase n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEU4_9EURY Length = 274 Score = 46.7 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 25/43 (58%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA 44 R + T+D D++ LDSL Y ++SEA+ DILR ++ Sbjct: 3 ARTSFTIDADVVAKLDSLVDNIYYRSKSEAVEDILRKYFEKQN 45 >UniRef50_A1RUY5 Putative transcriptional regulators, CopG/Arc/MetJ family n=5 Tax=Thermoproteaceae RepID=A1RUY5_PYRIL Length = 65 Score = 45.9 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 22/44 (50%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA 44 M ++ + +E LD L + Y +RSEAIR LR L + Sbjct: 18 MILISFHVPQSYVEILDELVKMGFYPSRSEAIRAALRELLNRYK 61 >UniRef50_C0ZK25 Antitoxin EndoAI n=6 Tax=Firmicutes RepID=C0ZK25_BREBN Length = 99 Score = 45.1 bits (106), Expect = 8e-04, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG 52 +R+ I+L LL+ +D + Q+ +NRSE IR + L + + Sbjct: 14 KRIMISLPQHLLQEVDGVIQKEK-SNRSEFIRQAMHLYLKERKKRTIRETM 63 >UniRef50_Q3IM20 Homolog to transcription regulator n=4 Tax=Halobacteriaceae RepID=Q3IM20_NATPD Length = 85 Score = 44.8 bits (105), Expect = 9e-04, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 23/40 (57%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL 40 M +T+ + + L+ LD+ + + +RSE IR LR A+ Sbjct: 1 MTTITLKIPEAFLDDLDATWRAEDFPSRSEFIRWALRDAV 40 >UniRef50_D2RGK0 Putative transcriptional regulators, CopG/Arc/MetJ family n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RGK0_ARCPR Length = 57 Score = 44.4 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 28/50 (56%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGT 50 M+++++ L D E L++L Y + SEAIRD +R +A++A Sbjct: 1 MKKISVRLTDQHYEMLETLVAIGEYASVSEAIRDAIRKLIAEKAELVEKH 50 >UniRef50_C0QKL9 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKL9_DESAH Length = 93 Score = 44.0 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 6/58 (10%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYV 59 +R+TITL D+L ++ Y + SE IR+ +R Q+ + A +S + Sbjct: 7 ERITITLPPDMLASIKKEVSSGSYGSTSELIREAMRM------WQKREEEYKARISLI 58 >UniRef50_Q2FN54 Transcriptional regulator, CopG family n=3 Tax=Methanomicrobiales RepID=Q2FN54_METHJ Length = 56 Score = 44.0 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 25/44 (56%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA 44 M+R+TI L + + L+ + + + SEAIRD +R + + A Sbjct: 1 MKRITIRLPEQQITLLEKMVEAGEFPTVSEAIRDAVRMLIEKRA 44 >UniRef50_B5Y6F5 Ribbon-helix-helix protein, CopG family n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6F5_COPPD Length = 102 Score = 44.0 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEAT 45 +T ++ ++ + +D L+++ RSE IR+ +R +A+E Sbjct: 30 AVLTFSVPPEMGKMIDDLAKQEN-RTRSELIREAIRRYIAEEKW 72 >UniRef50_D2PF81 CopG domain protein DNA-binding domain protein n=9 Tax=Sulfolobus RepID=D2PF81_SULIS Length = 89 Score = 43.6 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 25/37 (67%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL 40 ++ L+D+ ++ +D++++ GY NRS+ IRD + L Sbjct: 35 ISFKLEDEFIKEVDNVARNLGYTNRSDFIRDAIIYYL 71 >UniRef50_A3DIW8 Putative transcriptional regulator, CopG family n=5 Tax=Clostridium RepID=A3DIW8_CLOTH Length = 58 Score = 43.6 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEAT 45 ++++ I+L D+LL+ +DS+ NRSE +R+ ++ + ++ Sbjct: 4 LKKILISLPDNLLKEVDSIVAMEKI-NRSEFVREAMKLYIREKRR 47 >UniRef50_B8G285 Putative transcriptional regulator, CopG family n=4 Tax=Clostridia RepID=B8G285_DESHD Length = 92 Score = 43.6 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG 52 +R+ I+L ++LL +D + NRSE IR+ + S L + + Q Sbjct: 5 KRIMISLPENLLAEVDDVVTLEN-RNRSEFIREAINSVLHERRKRGIREQM 54 >UniRef50_C8SCV4 Putative transcriptional regulator, CopG/Arc/MetJ family n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SCV4_FERPL Length = 63 Score = 43.6 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 27/53 (50%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGF 53 M++V+I L + E L+SL Y N SE IRD +R + + + ++ Sbjct: 1 MKKVSIRLTEKQYEFLESLVISGEYANVSEVIRDAIRYFMKAKMKEMSESEKV 53 >UniRef50_B5IWL3 Ribbon-helix-helix protein, copG family n=1 Tax=Thermococcus barophilus MP RepID=B5IWL3_9EURY Length = 119 Score = 43.2 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 25/39 (64%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL 40 ++++I+L +L+E LD L ++ Y RSE IR+ L L Sbjct: 6 KKLSISLPPELVELLDVLVEKGLYATRSEIIREALYLLL 44 >UniRef50_B1YCN5 Putative transcriptional regulator, CopG family n=3 Tax=Thermoproteaceae RepID=B1YCN5_THENV Length = 71 Score = 43.2 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 23/48 (47%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH 48 ++R+ I +LL +D L +R + NRS ++ + L Q+ Sbjct: 10 LERIAIRFPSELLMRMDKLVERGVFKNRSHLVKAAIEELLRDPKYQEA 57 >UniRef50_C3N733 Putative transcriptional regulator, CopG family n=1 Tax=Sulfolobus islandicus Y.G.57.14 RepID=C3N733_SULIY Length = 55 Score = 43.2 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Query: 4 VTITLDDDLLETLDSLSQ--RRGYNNRSEAIRDILRSALAQ 42 VT+++ +L + +D L + GY +R E + D +R + + Sbjct: 11 VTVSIPVELAKQIDELVASGKGGYVSRQEFVADAIRRRIEE 51 >UniRef50_C7P3M0 Putative transcriptional regulator, CopG family n=2 Tax=Halobacteriaceae RepID=C7P3M0_HALMD Length = 95 Score = 43.2 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 24/40 (60%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSAL 40 + R+ + + L+ +D + RG+N+RSE IR LR ++ Sbjct: 17 IDRINLRISRSFLDVVDETWRERGFNSRSEFIRYALRDSV 56 >UniRef50_A8A8K7 Putative transcriptional regulator, CopG family n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8K7_IGNH4 Length = 125 Score = 42.8 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 3/58 (5%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYV 59 R + L +L E LD +++R +RS+ I + + + + A + V Sbjct: 4 VRFGVALPKELAERLDEVAERLNV-SRSKVIEMATSAFINYLEALEDPNK--ATIFVV 58 >UniRef50_B0RYF6 Putative uncharacterized protein n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RYF6_XANCB Length = 110 Score = 42.8 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 21/37 (56%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILR 37 M + I+L D+L E +D Y + SE +R+++R Sbjct: 31 MATMNISLPDELKEFVDQQVLEHAYGSSSEYLRELIR 67 >UniRef50_D2PEH6 CopG domain protein DNA-binding domain protein n=6 Tax=Sulfolobus islandicus RepID=D2PEH6_SULIS Length = 74 Score = 42.8 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 28/51 (54%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG 52 +T L++++L +D + ++ GY+ RS+ IRD + + + + ++ Sbjct: 20 VIITFKLEENILSMVDEIVKKLGYDYRSDFIRDAIEKYINYLKSSSNNSKM 70 >UniRef50_A2SRF9 Transcriptional regulator, CopG family n=2 Tax=Methanomicrobiales RepID=A2SRF9_METLZ Length = 61 Score = 42.8 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 23/43 (53%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQE 43 M R+TI L +E L+ L + + SEA+R +R L+Q Sbjct: 1 MDRITIRLPPQQVELLEKLVESGEFPTVSEAVRYAVREFLSQR 43 >UniRef50_B7NEP0 Putative uncharacterized protein n=1 Tax=Escherichia coli UMN026 RepID=B7NEP0_ECOLU Length = 136 Score = 42.8 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 2 QRVTITLDDDLLETLDSLSQRR-GYNNRSEAIRDILRSAL 40 +R+ IT+ LL +D+ + Y NRS + + R L Sbjct: 94 ERINITMPKRLLNKIDTYVRNNPDYANRSAFLAEAARRVL 133 >UniRef50_Q3JAU9 Helix-turn-helix protein, CopG family n=6 Tax=Bacteria RepID=Q3JAU9_NITOC Length = 80 Score = 42.8 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 27/52 (51%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGF 53 ++ IT+D +L +D L ++ +++RS+AI + + + A + + Sbjct: 4 AKIAITIDKPILARIDRLVAKQVFSSRSQAIEAAVEEKIERLAHGRLARECA 55 >UniRef50_A6VCR0 Putative addiction module antidote protein, family n=7 Tax=Proteobacteria RepID=A6VCR0_PSEA7 Length = 107 Score = 42.4 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 23/44 (52%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA 44 M + I+L D L +D +RGY SE +R+++R ++ Sbjct: 30 MSTMNISLPDTLKSFVDEQVSQRGYGTSSEYVRELIRKDQDRQR 73 >UniRef50_B9JBH5 CopG/Arc/MetJ DNA-binding domain-containing transcriptional regulator n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JBH5_AGRRK Length = 90 Score = 42.1 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 24/47 (51%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH 48 ++++I+L +++ + S Y + SE +R +R L +E Q Sbjct: 3 EKLSISLPSEMVAAIKSRVDAGAYASTSEVLRAAVRVWLREEEEYQE 49 >UniRef50_Q7V1J7 Possible DnaJ domain n=1 Tax=Prochlorococcus marinus subsp. pastoris str. CCMP1986 RepID=Q7V1J7_PROMP Length = 337 Score = 42.1 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 22/43 (51%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA 44 +R++I L ++L+ D L + G+ R I +L L +E Sbjct: 10 KRISIDLPEELVSRFDQLRKEWGFRARGPVIEKLLTEILQEEE 52 >UniRef50_B7KL55 Putative transcriptional regulator, CopG family n=2 Tax=Cyanothece RepID=B7KL55_CYAP7 Length = 114 Score = 42.1 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 21/96 (21%) Query: 4 VTITLDDDLLETLDSLSQ-------RRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVL 56 V+I + + LE LD+L+Q R + NRS+ I D + LA + Sbjct: 7 VSIRIPAETLERLDNLAQNLYPSRRRGKHPNRSQVILDAIEEYLANHEAETVDEP----- 61 Query: 57 SYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINH 92 L ++ +H ++ +I+ Sbjct: 62 ---------SLEEQVNQILQQYHKHLEQSIKEYIDE 88 >UniRef50_B0TE83 Helix-turn-helix domain protein, copg family, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TE83_HELMI Length = 89 Score = 42.1 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQ 46 ++R+ +TL + LL+ LD + NRS+ IR+ + +++ + Sbjct: 4 LKRIQVTLPESLLDELDRVLMAEKM-NRSQLIREAVNLYMSEHKRK 48 >UniRef50_B2A572 Transcriptional regulator, CopG family n=3 Tax=Clostridia RepID=B2A572_NATTJ Length = 90 Score = 41.7 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSA 39 +R+ I+L ++LLE +D + +RSE +R +R Sbjct: 5 ERIMISLPENLLEEIDGIVSNEQ-CSRSEFVRKAMRLY 41 >UniRef50_Q0YTZ6 CopG-like DNA-binding n=3 Tax=Chlorobium RepID=Q0YTZ6_9CHLB Length = 84 Score = 41.7 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH 48 V I D LL+ +D R+ + +RSE IR+ R + + + Sbjct: 7 VNIAFQDSLLDQIDKT-ARKEFRSRSELIREAARLYIERRSQWSD 50 >UniRef50_C7NQV1 Putative uncharacterized protein n=2 Tax=Halobacteriaceae RepID=C7NQV1_HALUD Length = 108 Score = 41.7 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSY 58 M R T T+ DDL + ++ + N+S+AIR +LR + + A ++ Sbjct: 1 MSRTTATIPDDLTDLMEGAVDAGVFENKSDAIRHVLREYFEEH----PNERVAAAIAL 54 >UniRef50_Q4KEL3 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=Q4KEL3_PSEF5 Length = 90 Score = 41.7 bits (97), Expect = 0.008, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 22/38 (57%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRS 38 M + I+L D L +D +RGY+ SE +R+++R Sbjct: 13 MSTMNISLPDALKSFVDDQVSQRGYSTSSEYVRELIRK 50 >UniRef50_B0SBS5 Transcriptional regulator n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SBS5_LEPBA Length = 81 Score = 41.3 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH 48 V I+ + LL+ +D +R + +RSE IR+ R+ + +++ Q Sbjct: 5 VNISFEKALLKEIDK-IAKREHRSRSELIREAARAYIEKKSKWQA 48 >UniRef50_B2FQH5 Putative uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=B2FQH5_STRMK Length = 100 Score = 41.3 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 26/46 (56%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQ 46 M + I+L D L + +D + GY++ S+ +RD++R +A + Sbjct: 21 MATMNISLTDPLKQFVDEEVREGGYSSTSDYVRDLIRQRQRSKAEE 66 >UniRef50_A1JJS5 Putative uncharacterized protein n=4 Tax=Yersinia RepID=A1JJS5_YERE8 Length = 135 Score = 41.3 bits (96), Expect = 0.010, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Query: 3 RVTITLDDDLLETLDSLSQ-RRGYNNRSEAIRDILRSALAQ 42 + +T+ +LL +D RGY NRS+ + ++ R +A+ Sbjct: 95 KFNLTMSQNLLTAIDKFIATHRGYKNRSQFLAELARERIAR 135 >UniRef50_C7NYG6 Putative uncharacterized protein n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7NYG6_HALMD Length = 133 Score = 40.9 bits (95), Expect = 0.012, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 22/33 (66%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDIL 36 V+ + DDDL++ DS + Y +RSEA+R ++ Sbjct: 9 VSFSADDDLVDAFDSWVEESQYGSRSEALRTLM 41 >UniRef50_C3JNM8 Hypothetical transcriptional regulator n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JNM8_RHOER Length = 70 Score = 40.9 bits (95), Expect = 0.013, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 17/37 (45%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSA 39 + TI+L D+ LD + G RS IR LR Sbjct: 4 KFTISLPDEDAHLLDEYVRDHGLRGRSAGIRAALRLL 40 >UniRef50_Q9F560 YcfB protein n=9 Tax=Gammaproteobacteria RepID=Q9F560_ECOLX Length = 145 Score = 40.9 bits (95), Expect = 0.013, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Query: 2 QRVTITLDDDLLETLDSLSQRRG--YNNRSEAIRDILRSALAQE 43 QR+ I+L D L+ +D + G Y +RS + R LA + Sbjct: 102 QRINISLPDVLIRRIDGYVRESGGVYKDRSHFLAQAARHELAYK 145 >UniRef50_D2C2Q9 Putative transcriptional regulator, CopG family n=1 Tax=Dickeya dadantii Ech586 RepID=D2C2Q9_DICD5 Length = 277 Score = 40.9 bits (95), Expect = 0.013, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 22/50 (44%) Query: 5 TITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFA 54 + ++ LE LD RG +RSE + ++L A+ Q+ Q Sbjct: 9 SFSIRKTTLEALDKYVAARGKRSRSELVSELLDFAIDQKKHQHDEENIPG 58 >UniRef50_D2RT25 Putative transcriptional regulator, CopG family n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RT25_9EURY Length = 83 Score = 40.9 bits (95), Expect = 0.013, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 26/51 (50%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQ 51 + RVT D+ L L+SL Y++RSEA+R +R L + + + Sbjct: 25 LDRVTFRATDEQLAALESLVDDGVYHSRSEALRAGVRQLLERHRRLEPDDE 75 >UniRef50_Q3KFX5 Putative phage-related protein n=3 Tax=Pseudomonas RepID=Q3KFX5_PSEPF Length = 134 Score = 40.9 bits (95), Expect = 0.013, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 19/42 (45%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQE 43 ++V +TL +++ +D + +RS + D L + Sbjct: 93 EKVNVTLPGYVIQRIDRYVREHNVKSRSSFLADAAMEKLVRH 134 >UniRef50_A8S5F4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8S5F4_9CLOT Length = 163 Score = 40.9 bits (95), Expect = 0.014, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 34/87 (39%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 QR+ + ++ +L+E D + G +R+E + + ++ + +++ LS V Sbjct: 34 QRIGVYMEKELVERADEMVSYVGARSRNEFVAEAVKFYIGFLNSKKAENYLLQSLSSVLT 93 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHV 88 D +R+ HV Sbjct: 94 STVHDSENRLARMDFKLAVEISKLAHV 120 >UniRef50_Q92ME4 Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti RepID=Q92ME4_RHIME Length = 91 Score = 40.5 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 22/43 (51%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA 44 ++++I+L D+ + + Y + SE IR+ LR +E Sbjct: 4 EKLSISLPVDMARMVRRRVEDGAYASNSEVIREALRLWQQREQ 46 >UniRef50_B1WV10 Putative uncharacterized protein n=3 Tax=Cyanobacteria RepID=B1WV10_CYAA5 Length = 91 Score = 40.5 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 23/53 (43%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGF 53 + R T+TL LLE D + NR++ I L+ L Q ++ + Sbjct: 6 LIRTTVTLPKSLLEETDIRVKEGKAKNRNDFIALALQKELEQLKREEIDSLLA 58 >UniRef50_Q18EA8 Putative uncharacterized protein n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18EA8_HALWD Length = 63 Score = 40.5 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 25/47 (53%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQ 47 M R+T++ DDL ++ + + + +S+A+R+ +R ++ Sbjct: 1 MPRITVSYPDDLDFLIEGVVEAGVFGGKSDALREFVREYFEDHENER 47 >UniRef50_C7NV28 Putative transcriptional regulator, CopG family n=2 Tax=Halobacteriaceae RepID=C7NV28_HALUD Length = 94 Score = 40.5 bits (94), Expect = 0.016, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 25/46 (54%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHG 49 V I + + L +D+ + +G+N+RSE IR +LR AL + Sbjct: 13 VNIRMTESFLADVDTTWEDQGFNSRSEFIRAVLRDALKHPEFNRAD 58 >UniRef50_B2AG39 Antitoxin of a toxin/antitoxin system n=20 Tax=root RepID=B2AG39_CUPTR Length = 92 Score = 40.5 bits (94), Expect = 0.016, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 24/41 (58%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA 44 +++TL ++ + + + Y + SE IRD LR+ LA++ Sbjct: 7 LSVTLPTEMAQAVKDKVRSGEYASESEVIRDGLRALLARDR 47 >UniRef50_Q18DN8 Putative uncharacterized protein n=4 Tax=Halobacteriaceae RepID=Q18DN8_HALWD Length = 130 Score = 40.5 bits (94), Expect = 0.017, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHG 49 V L + LE +D Q RG+N+RSE IR LR A+ + Sbjct: 54 VNFKLTESFLEQIDDTWQGRGFNSRSEFIRYTLRDAVEFPTFDRDE 99 >UniRef50_C6MCQ4 Putative addiction module antidote protein, CopG/Arc/MetJ family n=2 Tax=Nitrosomonas sp. AL212 RepID=C6MCQ4_9PROT Length = 98 Score = 40.5 bits (94), Expect = 0.017, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 22/47 (46%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH 48 ++++ITL D+L + + Y + SE IR +R QE Sbjct: 8 EKISITLPPDMLNIIREKVKDGAYASTSEVIRAAMRLWQRQEEEHHA 54 >UniRef50_A2BM81 Putative uncharacterized protein n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BM81_HYPBU Length = 103 Score = 40.5 bits (94), Expect = 0.019, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 20/34 (58%) Query: 8 LDDDLLETLDSLSQRRGYNNRSEAIRDILRSALA 41 L+ +++E LD + GY +RSE IR+ + + Sbjct: 26 LEVEIIEELDRTWRALGYTSRSEFIREAILYYMQ 59 >UniRef50_UPI0001C31469 putative transcriptional regulator, CopG family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31469 Length = 77 Score = 40.1 bits (93), Expect = 0.019, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQE 43 M +V I+L DDLLE D+ +QRR RS +R++ LA Sbjct: 1 MAKVMISLPDDLLERFDTYAQRRR-TTRSGLLRELAEHELAAN 42 >UniRef50_Q08W07 Putative uncharacterized protein n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08W07_STIAU Length = 264 Score = 40.1 bits (93), Expect = 0.020, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ 42 + + ++ + LE LD + G +R+E R +R L + Sbjct: 208 RVIPLSFEAKALEGLDKAWRNAGMPSRTEFFRRAIRRYLVE 248 >UniRef50_B3T8I8 Putative Ribbon-helix-helix protein, copG family protein n=1 Tax=uncultured marine microorganism HF4000_APKG5H11 RepID=B3T8I8_9ZZZZ Length = 87 Score = 40.1 bits (93), Expect = 0.021, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGF 53 M ++ I+L D++L+ ++ RG +RSE R + L +E ++ + Sbjct: 1 MAKIAISLPDEVLDAVEKERSERGI-SRSEYFRRTVEEHLRREKEKEDDARYI 52 >UniRef50_A1T480 Putative transcriptional regulator, CopG family n=2 Tax=Actinomycetales RepID=A1T480_MYCVP Length = 76 Score = 40.1 bits (93), Expect = 0.021, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 21/38 (55%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSA 39 +++I+L +D + +D+ G +RS AI+ +R Sbjct: 1 MKISISLSEDEIALVDAYVDHAGLPSRSAAIQKAIRML 38 >UniRef50_C4XIU2 Putative uncharacterized protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XIU2_DESMR Length = 92 Score = 40.1 bits (93), Expect = 0.022, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 21/48 (43%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH 48 M+++ I L ++ + + Y + SE + D LR + A + Sbjct: 4 MEKIDIALPPEMADMVRRAVASGAYASASEVVSDALRDWRDRRAGLED 51 >UniRef50_C5V4M6 Putative transcriptional regulator, CopG/Arc/MetJ family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4M6_9PROT Length = 95 Score = 40.1 bits (93), Expect = 0.023, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 19/38 (50%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSA 39 ++++I L +++ + Y + SE IRD LR Sbjct: 5 EKISIALPPEMVHIVRGAVATGEYASSSEVIRDALRDW 42 >UniRef50_B9DXM3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B9DXM3_CLOK1 Length = 167 Score = 40.1 bits (93), Expect = 0.023, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 4/105 (3%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 R ++ ++LE D L ++ +R+E + + LR +Q+ LS V Sbjct: 38 VRTGFYIEKEVLERCDELLEQANVKSRNEFVTEALRFYCGYLISQKIENYLLQSLSSVLV 97 Query: 62 HEKRDLASRIVSTQHHHHDLSVATLHV----HINHDDCLEIAVLK 102 RD +R+ HV H D L+ LK Sbjct: 98 STIRDTENRLARMDFKIATELSKLSHVVAYTHAVDDQALQSLHLK 142 >UniRef50_B5IQ88 Ribbon-helix-helix protein, copG family n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IQ88_9CHRO Length = 74 Score = 40.1 bits (93), Expect = 0.024, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQE 43 + + ++ +L LD L+++ G +RS IR+ +R L + Sbjct: 1 MVIGVRVEPELERQLDQLARQLG-KSRSACIREAIRQYLLRH 41 >UniRef50_Q7NP89 Gsl0168 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NP89_GLOVI Length = 91 Score = 40.1 bits (93), Expect = 0.025, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 24/46 (52%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQ 47 ++++ITL ++ + + Y + SE IR+ LR + +E + Sbjct: 5 EKLSITLPSEMADFIRQKVDSGLYASNSEIIREALRGMMERERRLE 50 >UniRef50_Q3JI77 KluA n=25 Tax=pseudomallei group RepID=Q3JI77_BURP1 Length = 131 Score = 40.1 bits (93), Expect = 0.025, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 23/41 (56%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA 44 ++I+L ++ + + + + SE IRD LR+ +A++ Sbjct: 52 LSISLPYEMADYIRAKVSTGEFATESEVIRDALRTLIARDR 92 >UniRef50_C8SLQ5 Putative addiction module antidote protein, CopG/Arc/MetJ family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SLQ5_9RHIZ Length = 91 Score = 40.1 bits (93), Expect = 0.025, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 21/39 (53%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSA 39 + + +ITL +L + +D + Y + SE IRD LR Sbjct: 4 VDKRSITLSPELAQAVDDVVAAGEYASASEVIRDALRQW 42 >UniRef50_D1TR69 Toxin-antitoxin system, antitoxin component, HicB family n=25 Tax=Yersinia RepID=D1TR69_YERPE Length = 135 Score = 39.7 bits (92), Expect = 0.025, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 2 QRVTITLDDDLLETLDSLSQR-RGYNNRSEAIRDILRSAL 40 + +T+ +LL +D RGY NRS+ + ++ R + Sbjct: 94 VKFNLTMSQNLLTAIDKFIATNRGYKNRSQFLAELAREKI 133 >UniRef50_A1W5L9 Putative transcriptional regulators, CopG/Arc/MetJ family n=1 Tax=Acidovorax sp. JS42 RepID=A1W5L9_ACISJ Length = 83 Score = 39.7 bits (92), Expect = 0.026, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 1 MQR--VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQ 47 M R ++ L + + E +D+ Y N SE IRD++R ++A ++ Sbjct: 1 MSRQTMSFALPESMREYIDNRVAAGNYGNTSEYIRDLVRRDQEEQAKKR 49 >UniRef50_A5KTC8 Putative transcriptional regulator, CopG family n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KTC8_9BACT Length = 93 Score = 39.7 bits (92), Expect = 0.026, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSY 58 + I+L +L++ +DS + + Y +RS+ IR L L + Q LS Sbjct: 6 INISLPKELIKEIDS-AAKAEYASRSDYIRQALVGKLKSDKAQSDDWDLLEALSV 59 >UniRef50_B1I6K0 Putative transcriptional regulator, CopG family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I6K0_DESAP Length = 102 Score = 39.7 bits (92), Expect = 0.031, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 26/53 (49%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGF 53 M+ +T+ LD+ L ++ G N+SE +R L++ LA+E+ Sbjct: 15 MKSITVKLDEATFRQLQEAAEAGGIKNQSELVRRALKTYLARESLAARKQAVA 67 >UniRef50_B5INF8 Putative uncharacterized protein n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5INF8_9CHRO Length = 105 Score = 39.4 bits (91), Expect = 0.033, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 5/37 (13%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRS 38 +RVT+T+ DL+ +D + NRS I D +R Sbjct: 9 ERVTVTMPADLIAGIDRFER-----NRSRFIADAVRH 40 >UniRef50_UPI0001979092 hypothetical protein HcinC1_02204 n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001979092 Length = 122 Score = 39.4 bits (91), Expect = 0.035, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 2 QRVTITLDDDLLETLDSLSQRRGY--NNRSEAIRDILRSALAQEATQQHG 49 + T +++++L+ +D G ++S + LR+ LA + Sbjct: 62 RIFTFSINEELMGEIDEFLNEFGERGESKSSFTEEALRAYLAVKKANIKD 111 >UniRef50_Q7NNQ4 Gsr0356 protein n=2 Tax=Bacteria RepID=Q7NNQ4_GLOVI Length = 86 Score = 39.4 bits (91), Expect = 0.039, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 30/52 (57%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQG 52 MQ + I+L + L + +D + Y++ SE +R+++R+ ++A +Q + Sbjct: 1 MQSMNISLPEPLKQFVDGQIAQGRYSSASEYVRELIRADEKRKAEEQLEAKL 52 >UniRef50_A5UC13 Putative uncharacterized protein n=13 Tax=Pasteurellaceae RepID=A5UC13_HAEIE Length = 149 Score = 39.4 bits (91), Expect = 0.039, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 2 QRVTITLDDDLLETLDSLSQRRG--YNNRSEAIRDILRSALAQEATQQ 47 QR+ ++L + LL +D G Y +RS + + L + ++ Sbjct: 101 QRINVSLPEYLLTRIDRRVAAMGNYYKDRSHFLANAAHRELHAHSDKE 148 >UniRef50_A9VW26 Putative uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=A9VW26_METEP Length = 104 Score = 39.0 bits (90), Expect = 0.043, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 21/39 (53%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSA 39 ++R+T+ + + + + + Y + SEA+RD +R Sbjct: 12 VERMTVVFPEPMATQIRAAVEAGEYASTSEAVRDAVRLW 50 >UniRef50_B4ET85 Phage protein n=27 Tax=Enterobacteriaceae RepID=B4ET85_PROMH Length = 137 Score = 39.0 bits (90), Expect = 0.044, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Query: 2 QRVTITLDDDLLETLDSLSQRR-GYNNRSEAIRDILRSALAQE 43 +R+ ITL LL +D++ + Y +RS I R L + Sbjct: 94 ERINITLPHRLLSRIDTIVKTNPEYGSRSGFIATATRKELQKN 136 >UniRef50_D1A7S6 Putative transcriptional regulator, CopG family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A7S6_THECD Length = 80 Score = 39.0 bits (90), Expect = 0.044, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA 44 +R+ ++L L LD+ +R G +RS I + +R AL ++A Sbjct: 4 ERINVSLPSAQLRMLDAHVKRVGV-SRSTFIGESVRKALLEDA 45 >UniRef50_Q59073 Uncharacterized protein MJ1679 n=1 Tax=Methanocaldococcus jannaschii RepID=Y1679_METJA Length = 97 Score = 39.0 bits (90), Expect = 0.047, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 22/39 (56%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ 42 +T+ + ++ +D L + +++R E +R +R +L + Sbjct: 6 ITLKIPKSIVNQIDELIKEGYFSSRDEFVRYAVRESLTE 44 >UniRef50_Q9V2N5 Putative uncharacterized protein n=3 Tax=Thermococcaceae RepID=Q9V2N5_PYRAB Length = 112 Score = 39.0 bits (90), Expect = 0.049, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 24/47 (51%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGT 50 V++ L ++ +D L ++ + +RS+ I+ + AL Q +Q Sbjct: 13 VSVRLPKYIIRKIDELVEKGEFKSRSDFIKYAVTLALGQIMMEQARE 59 >UniRef50_Q18GU1 Putative uncharacterized protein n=6 Tax=Halobacteriaceae RepID=Q18GU1_HALWD Length = 70 Score = 39.0 bits (90), Expect = 0.054, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQ 46 T+++ DL +D + +++ S+ +R +LRS + Q + Sbjct: 5 TTVSVPKDLAARVDETIEGTSFSSTSDLVRFLLRSIVIQHQRE 47 >UniRef50_B9TH19 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TH19_RICCO Length = 148 Score = 38.6 bits (89), Expect = 0.057, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 29/64 (45%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYE 61 +++TI L L +D L Q Y NR++ IR +R+ L Q A T L + Sbjct: 40 EKITINLGPVDLGQIDLLVQEGFYANRTDLIRTAIRNQLNQHAEVVRQTVARKSLVLGMQ 99 Query: 62 HEKR 65 H R Sbjct: 100 HYSR 103 >UniRef50_B1LWB5 Putative transcriptional regulators, CopG/Arc/MetJ family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LWB5_METRJ Length = 63 Score = 38.6 bits (89), Expect = 0.063, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH 48 +TI++ +L L Y + SE +R LR E + Sbjct: 7 ITISVPPELRTFLQGCVATGRYTSISEVVRAALREFERAERGKAA 51 >UniRef50_A3UKJ6 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UKJ6_9RHOB Length = 123 Score = 38.6 bits (89), Expect = 0.064, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 21/36 (58%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSA 39 + + L +LL+ +DS + + +RSEA+ L+ A Sbjct: 12 IRVYLPSELLDLIDSDVASKRFQSRSEAVTAALQKA 47 >UniRef50_A2BLC9 Putative uncharacterized protein n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BLC9_HYPBU Length = 73 Score = 38.6 bits (89), Expect = 0.064, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 23/51 (45%) Query: 3 RVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGF 53 VT + +L+E LD L + + NRSEA+R L L + + Sbjct: 6 VVTFKVPVELVEKLDELVRMGIFKNRSEALRHALVMLLNKYRGGLFAEEAI 56 >UniRef50_Q573G1 Putative zinc finger protein ORF104b n=1 Tax=Acidianus filamentous virus 2 RepID=Y104B_AFV2 Length = 104 Score = 38.6 bits (89), Expect = 0.065, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSY 58 M+R++ ++D+L LD S + + RSEAIR ILR L+ + + + Sbjct: 1 MKRISFKVEDELARNLDKYSMQ-NHLTRSEAIRQILREKLSIMQIPTDKGKVVSGIII 57 >UniRef50_O28681 Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus RepID=O28681_ARCFU Length = 286 Score = 38.6 bits (89), Expect = 0.066, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALA 41 M+ V++ L++ L+E +D R+ +RSE IR + L+ Sbjct: 1 MKLVSLRLEEGLIEKIDE-VARKTLQSRSEIIRSSIALYLS 40 >UniRef50_O19199 Uncharacterized protein AF_0569 n=1 Tax=Archaeoglobus fulgidus RepID=Y569_ARCFU Length = 60 Score = 38.6 bits (89), Expect = 0.070, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 24/47 (51%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH 48 ++++I L + L+ L + + + SEA+R+ ++ L + Q Sbjct: 5 RKISIRLTEKYYTKLELLVESGEFTSVSEAVREAVKLLLEKYKEQLE 51 >UniRef50_Q5JG37 Putative uncharacterized protein n=1 Tax=Thermococcus kodakarensis RepID=Q5JG37_PYRKO Length = 108 Score = 38.2 bits (88), Expect = 0.073, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 23/39 (58%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQ 42 +++ L ++E +D L + + + +RS+ I+ + AL Q Sbjct: 10 ISVRLPGYVVEKIDELVREKEFRSRSDFIKFAVTMALGQ 48 >UniRef50_D2JDJ3 Putative uncharacterized protein n=2 Tax=Staphylococcus aureus RepID=D2JDJ3_STAAU Length = 80 Score = 38.2 bits (88), Expect = 0.073, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 22/37 (59%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRS 38 +R TL+ + + ++ L+ GY + SE I +++++ Sbjct: 43 ERFQFTLEPSVRKKIERLANENGYASSSEFINELIKN 79 >UniRef50_A1RZW3 Putative transcriptional regulator, CopG family n=2 Tax=Archaea RepID=A1RZW3_THEPD Length = 108 Score = 38.2 bits (88), Expect = 0.078, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 4/44 (9%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNR---SEAIRDILRSALA 41 M R+T+++DDDL E L ++ Y +R S + D LRS LA Sbjct: 1 MARLTVSIDDDLAERLRRAAEAL-YGSRRRVSRVVEDALRSYLA 43 >UniRef50_A9CJV3 Putative uncharacterized protein n=4 Tax=Rhizobium/Agrobacterium group RepID=A9CJV3_AGRT5 Length = 93 Score = 38.2 bits (88), Expect = 0.080, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 20/39 (51%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSA 39 ++++++++ E L + Y + SE IR+ +R Sbjct: 4 VEKISVSMTPQHAEILRDAVESGAYASSSEVIREAMRDW 42 >UniRef50_A1SKR3 CopG domain protein DNA-binding domain protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SKR3_NOCSJ Length = 88 Score = 38.2 bits (88), Expect = 0.082, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQH 48 + V + LD LL LD ++ +RSE IR +R+ +A + Q Sbjct: 43 RVVPVRLDATLLAQLDGRAEHDN-QSRSEIIRAAIRAYVAGRSATQP 88 >UniRef50_Q5WRX4 Putative uncharacterized protein n=1 Tax=Legionella pneumophila str. Lens RepID=Q5WRX4_LEGPL Length = 134 Score = 38.2 bits (88), Expect = 0.088, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 20/43 (46%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA 44 +R+ IT+ + +L +D ++ NRS + D S + Sbjct: 92 KRINITMPERILSLIDLYAKNHAIKNRSSFLADAALSYMESHK 134 >UniRef50_C6B5G6 Putative transcriptional regulator, CopG/Arc/MetJ family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B5G6_RHILS Length = 155 Score = 38.2 bits (88), Expect = 0.090, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 2/65 (3%) Query: 4 VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHE 63 ++ITL ++ + + Y + SE R+ LR+ QE ++ +Y+ Sbjct: 7 MSITLPLEMAKRVKQRVSNGYYASESEVTREGLRAL--QERENAVENWLRTEVTAIYDAY 64 Query: 64 KRDLA 68 K D+ Sbjct: 65 KADIR 69 >UniRef50_A4X0A8 Putative uncharacterized protein n=1 Tax=Rhodobacter sphaeroides ATCC 17025 RepID=A4X0A8_RHOS5 Length = 88 Score = 38.2 bits (88), Expect = 0.090, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 23/44 (52%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA 44 M R+TI++ D + E +++ Y N SE RD++R + Sbjct: 1 MSRLTISMPDQMNEWVEAQIAAGRYGNVSEYFRDLVRRDQERRE 44 >UniRef50_C5SJ89 Putative addiction module antidote protein, CopG/Arc/MetJ family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SJ89_9CAUL Length = 86 Score = 38.2 bits (88), Expect = 0.092, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 6/81 (7%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQ------HGTQGFA 54 M + +I++ D + T+ ++ YNN SE RD++R ++A + + Sbjct: 1 MAKFSISMTDRMALTVQRRVEQGDYNNVSEYFRDLVRRDEEKQAAEDRLRDMLDKAEASG 60 Query: 55 VLSYVYEHEKRDLASRIVSTQ 75 V +++ D R + Q Sbjct: 61 VSDVSFDNIWNDAEERYLKRQ 81 >UniRef50_Q98J17 Mlr2150 protein n=5 Tax=Rhizobiales RepID=Q98J17_RHILO Length = 133 Score = 37.8 bits (87), Expect = 0.096, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 2 QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALA 41 R+ +TL DD+L +D+ ++ GY RS + A+ Sbjct: 91 VRINVTLPDDVLRRIDAFAEAHGYT-RSGFLAKAAEKAME 129 >UniRef50_Q3J2T1 Possible transcriptional regulator, CopG family n=4 Tax=Rhodobacter sphaeroides RepID=Q3J2T1_RHOS4 Length = 131 Score = 37.8 bits (87), Expect = 0.099, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Query: 1 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALA 41 ++RV I++D LL +D+ + RG RS I + R +A Sbjct: 90 LERVNISMDRGLLRAIDATASARGMT-RSAFIAMVARREIA 129 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.165 0.472 Lambda K H 0.267 0.0504 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 962,249,318 Number of Sequences: 3077464 Number of extensions: 40867982 Number of successful extensions: 138833 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 458 Number of HSP's successfully gapped in prelim test: 161 Number of HSP's that attempted gapping in prelim test: 138022 Number of HSP's gapped (non-prelim): 624 length of query: 133 length of database: 1,040,396,356 effective HSP length: 98 effective length of query: 35 effective length of database: 738,804,884 effective search space: 25858170940 effective search space used: 25858170940 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 88 (38.2 bits)